Query 039514
Match_columns 790
No_of_seqs 718 out of 5588
Neff 10.0
Searched_HMMs 29240
Date Mon Mar 25 17:59:31 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/039514.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/039514hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3rgz_A Protein brassinosteroid 100.0 2.2E-81 7.4E-86 740.9 50.4 610 2-627 4-752 (768)
2 3rgz_A Protein brassinosteroid 100.0 1.1E-63 3.7E-68 589.8 38.8 526 53-589 100-740 (768)
3 1ziw_A TOLL-like receptor 3; i 100.0 1.5E-59 5.2E-64 549.9 45.1 562 53-617 25-627 (680)
4 1ziw_A TOLL-like receptor 3; i 100.0 5.5E-58 1.9E-62 536.7 42.9 535 53-594 49-627 (680)
5 3t6q_A CD180 antigen; protein- 100.0 9.5E-58 3.3E-62 527.5 36.7 520 53-595 33-566 (606)
6 3vq2_A TLR4, TOLL-like recepto 100.0 3.7E-56 1.3E-60 514.2 35.6 519 53-596 32-565 (606)
7 3t6q_A CD180 antigen; protein- 100.0 5E-55 1.7E-59 504.7 39.7 493 53-569 57-564 (606)
8 3j0a_A TOLL-like receptor 5; m 100.0 4.6E-55 1.6E-59 521.5 38.4 523 40-595 13-566 (844)
9 4eco_A Uncharacterized protein 100.0 6.3E-56 2.1E-60 511.4 24.7 488 8-569 28-604 (636)
10 3vq2_A TLR4, TOLL-like recepto 100.0 5.3E-54 1.8E-58 496.1 37.0 528 57-617 15-563 (606)
11 4ecn_A Leucine-rich repeat pro 100.0 4.9E-54 1.7E-58 502.4 31.3 491 5-565 264-864 (876)
12 3j0a_A TOLL-like receptor 5; m 100.0 7.9E-53 2.7E-57 502.2 41.7 526 57-617 8-565 (844)
13 2z63_A TOLL-like receptor 4, v 100.0 1.5E-50 5.1E-55 464.1 35.1 499 53-598 28-540 (570)
14 2z81_A CD282 antigen, TOLL-lik 100.0 1.1E-49 3.6E-54 454.7 36.6 494 40-594 3-515 (549)
15 2z63_A TOLL-like receptor 4, v 100.0 2.5E-48 8.5E-53 445.7 37.1 513 58-617 12-536 (570)
16 4g8a_A TOLL-like receptor 4; l 100.0 4.6E-48 1.6E-52 449.8 37.1 518 54-594 53-585 (635)
17 2z7x_B TOLL-like receptor 1, v 100.0 5.4E-48 1.8E-52 437.2 26.7 461 56-594 3-486 (520)
18 4eco_A Uncharacterized protein 100.0 5.5E-49 1.9E-53 453.5 15.4 519 9-592 26-603 (636)
19 4g8a_A TOLL-like receptor 4; l 100.0 5.8E-46 2E-50 432.0 38.1 531 58-616 36-584 (635)
20 2z81_A CD282 antigen, TOLL-lik 100.0 7.7E-47 2.6E-51 431.0 29.7 469 53-569 26-514 (549)
21 4ecn_A Leucine-rich repeat pro 100.0 2.6E-46 8.8E-51 437.3 24.9 467 77-587 323-862 (876)
22 2z7x_B TOLL-like receptor 1, v 100.0 2.8E-45 9.5E-50 414.9 25.0 459 104-616 3-485 (520)
23 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 6.6E-45 2.3E-49 415.2 26.5 462 56-595 34-516 (562)
24 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 6.5E-42 2.2E-46 390.5 26.6 456 102-616 32-514 (562)
25 1ogq_A PGIP-2, polygalacturona 100.0 1.1E-41 3.7E-46 357.5 23.3 294 5-317 1-302 (313)
26 3v47_A TOLL-like receptor 5B a 100.0 3.4E-39 1.1E-43 358.8 29.3 388 152-596 12-415 (455)
27 3v47_A TOLL-like receptor 5B a 100.0 2.9E-39 9.9E-44 359.3 28.7 380 61-492 18-407 (455)
28 1jl5_A Outer protein YOPM; leu 100.0 1.5E-39 5.2E-44 358.2 23.7 390 76-594 10-416 (454)
29 1jl5_A Outer protein YOPM; leu 100.0 1.1E-38 3.9E-43 351.2 24.5 394 150-612 11-409 (454)
30 3bz5_A Internalin-J, INLJ; leu 100.0 4.5E-37 1.6E-41 338.7 28.6 358 71-547 36-393 (457)
31 3bz5_A Internalin-J, INLJ; leu 100.0 9.4E-37 3.2E-41 336.2 29.6 367 89-574 30-396 (457)
32 2id5_A Lingo-1, leucine rich r 100.0 6.9E-37 2.4E-41 342.0 24.1 347 236-616 14-360 (477)
33 1o6v_A Internalin A; bacterial 100.0 1.1E-35 3.8E-40 330.7 31.7 344 77-494 46-389 (466)
34 1o6v_A Internalin A; bacterial 100.0 9.4E-36 3.2E-40 331.2 30.1 346 99-566 44-389 (466)
35 2id5_A Lingo-1, leucine rich r 100.0 1.3E-35 4.4E-40 331.7 26.1 346 214-594 16-361 (477)
36 3o6n_A APL1; leucine-rich repe 100.0 7.9E-35 2.7E-39 316.3 24.6 312 75-423 43-354 (390)
37 3oja_B Anopheles plasmodium-re 100.0 1.7E-34 5.8E-39 330.9 25.5 349 29-423 8-360 (597)
38 1ogq_A PGIP-2, polygalacturona 100.0 4.9E-34 1.7E-38 299.3 22.1 254 361-616 51-308 (313)
39 3o6n_A APL1; leucine-rich repe 100.0 2.6E-33 8.8E-38 304.4 24.9 335 232-616 44-378 (390)
40 4fcg_A Uncharacterized protein 100.0 2.7E-34 9.2E-39 303.0 15.0 275 4-320 21-315 (328)
41 3oja_B Anopheles plasmodium-re 100.0 3.5E-33 1.2E-37 319.9 25.1 335 232-616 50-384 (597)
42 4fmz_A Internalin; leucine ric 100.0 2.2E-32 7.6E-37 292.2 25.8 307 229-589 40-346 (347)
43 4fmz_A Internalin; leucine ric 100.0 1.3E-31 4.3E-36 286.4 28.5 302 54-421 45-346 (347)
44 2ft3_A Biglycan; proteoglycan, 100.0 8.3E-31 2.8E-35 277.8 23.7 287 55-394 35-330 (332)
45 1xku_A Decorin; proteoglycan, 100.0 3.2E-30 1.1E-34 273.1 26.9 286 57-394 35-329 (330)
46 1z7x_W Ribonuclease inhibitor; 100.0 1.4E-33 4.7E-38 314.2 -1.9 359 78-444 4-410 (461)
47 2ft3_A Biglycan; proteoglycan, 100.0 4.7E-30 1.6E-34 272.0 25.4 288 234-563 34-331 (332)
48 1xku_A Decorin; proteoglycan, 100.0 8.9E-30 3E-34 269.7 26.1 289 234-563 32-330 (330)
49 1z7x_W Ribonuclease inhibitor; 100.0 1.3E-33 4.3E-38 314.5 -3.7 388 150-589 3-440 (461)
50 2z80_A TOLL-like receptor 2, v 100.0 2.9E-30 9.8E-35 276.2 17.9 285 34-350 23-316 (353)
51 3zyi_A Leucine-rich repeat-con 100.0 6.1E-28 2.1E-32 267.1 22.9 246 57-349 58-304 (452)
52 3ogk_B Coronatine-insensitive 100.0 1.3E-30 4.5E-35 299.8 -0.0 454 40-538 41-548 (592)
53 2z66_A Variable lymphocyte rec 100.0 6E-28 2E-32 252.8 20.0 232 361-593 29-265 (306)
54 2z80_A TOLL-like receptor 2, v 100.0 9.9E-29 3.4E-33 264.2 13.8 284 281-594 30-319 (353)
55 3zyi_A Leucine-rich repeat-con 100.0 1.4E-27 4.9E-32 264.1 23.3 233 360-594 75-308 (452)
56 3zyj_A Leucine-rich repeat-con 100.0 1.7E-27 6E-32 262.5 23.5 232 360-593 64-296 (440)
57 3zyj_A Leucine-rich repeat-con 100.0 2.1E-27 7.3E-32 261.8 22.8 245 57-348 47-292 (440)
58 1ozn_A Reticulon 4 receptor; N 100.0 4.4E-28 1.5E-32 250.9 15.3 251 338-616 14-265 (285)
59 2z66_A Variable lymphocyte rec 100.0 1.2E-27 4E-32 250.6 18.6 278 285-594 10-292 (306)
60 3g06_A SSPH2 (leucine-rich rep 100.0 1.7E-27 5.7E-32 269.8 20.4 292 29-408 11-308 (622)
61 4fcg_A Uncharacterized protein 99.9 2.9E-27 9.8E-32 249.2 20.3 235 334-589 80-314 (328)
62 3ogk_B Coronatine-insensitive 99.9 2.7E-29 9.4E-34 288.8 1.0 449 92-586 64-548 (592)
63 1ozn_A Reticulon 4 receptor; N 99.9 3.9E-27 1.3E-31 243.8 16.5 253 309-595 14-267 (285)
64 2o6q_A Variable lymphocyte rec 99.9 1.5E-26 5.1E-31 237.1 20.0 218 37-295 1-218 (270)
65 1wwl_A Monocyte differentiatio 99.9 4.8E-29 1.6E-33 261.5 1.2 265 34-349 24-310 (312)
66 1wwl_A Monocyte differentiatio 99.9 3.5E-28 1.2E-32 254.9 6.8 245 335-590 43-310 (312)
67 3o53_A Protein LRIM1, AGAP0063 99.9 2.8E-27 9.5E-32 248.6 8.8 240 53-348 10-250 (317)
68 3o53_A Protein LRIM1, AGAP0063 99.9 3.8E-27 1.3E-31 247.6 6.7 238 280-560 32-270 (317)
69 3g06_A SSPH2 (leucine-rich rep 99.9 1.5E-24 5.2E-29 245.6 26.2 261 259-593 41-301 (622)
70 2p1m_B Transport inhibitor res 99.9 4.8E-28 1.6E-32 278.6 -3.0 110 477-587 429-542 (594)
71 2p1m_B Transport inhibitor res 99.9 3.3E-28 1.1E-32 279.9 -5.1 466 39-565 33-544 (594)
72 3oja_A Leucine-rich immune mol 99.9 6.1E-26 2.1E-30 252.2 11.9 216 360-589 34-250 (487)
73 3oja_A Leucine-rich immune mol 99.9 2.7E-26 9.3E-31 255.1 9.0 234 336-584 35-270 (487)
74 2z62_A TOLL-like receptor 4, v 99.9 6.7E-25 2.3E-29 225.8 17.4 211 360-595 28-243 (276)
75 2z62_A TOLL-like receptor 4, v 99.9 5E-24 1.7E-28 219.3 18.9 225 310-568 11-240 (276)
76 2o6q_A Variable lymphocyte rec 99.9 1.4E-23 4.8E-28 215.0 21.0 186 409-594 38-223 (270)
77 3m19_A Variable lymphocyte rec 99.9 1E-23 3.5E-28 213.5 16.4 193 38-248 2-194 (251)
78 1p9a_G Platelet glycoprotein I 99.9 4.3E-23 1.5E-27 213.1 18.7 205 381-592 7-211 (290)
79 3rfs_A Internalin B, repeat mo 99.9 2.6E-23 9E-28 213.1 15.0 204 381-595 38-241 (272)
80 1p9a_G Platelet glycoprotein I 99.9 2E-22 7E-27 208.0 19.2 207 403-616 5-212 (290)
81 3rfs_A Internalin B, repeat mo 99.9 1.2E-22 4E-27 208.2 16.9 177 54-246 42-218 (272)
82 4glp_A Monocyte differentiatio 99.9 1.1E-22 3.6E-27 213.0 15.4 227 336-589 65-307 (310)
83 3goz_A Leucine-rich repeat-con 99.9 8E-24 2.7E-28 226.7 4.7 250 341-591 4-299 (362)
84 2xwt_C Thyrotropin receptor; s 99.9 4.3E-22 1.5E-26 200.0 16.1 200 360-586 31-236 (239)
85 4glp_A Monocyte differentiatio 99.9 4.6E-22 1.6E-26 208.1 16.8 230 307-566 65-308 (310)
86 3goz_A Leucine-rich repeat-con 99.9 2.3E-23 7.8E-28 223.1 6.3 267 58-356 3-305 (362)
87 3m19_A Variable lymphocyte rec 99.9 1.1E-21 3.7E-26 198.5 18.1 161 433-593 36-196 (251)
88 2xwt_C Thyrotropin receptor; s 99.9 6.3E-22 2.2E-26 198.7 15.8 195 385-608 32-235 (239)
89 2ast_B S-phase kinase-associat 99.9 2.4E-23 8.2E-28 221.0 3.1 288 13-356 15-314 (336)
90 2ca6_A RAN GTPase-activating p 99.9 5.7E-23 2E-27 222.4 4.5 242 330-592 27-319 (386)
91 1h6u_A Internalin H; cell adhe 99.9 2.6E-21 9E-26 201.8 16.4 191 360-590 41-231 (308)
92 4ay9_X Follicle-stimulating ho 99.9 3E-21 1E-25 205.4 15.3 237 59-344 15-255 (350)
93 2ca6_A RAN GTPase-activating p 99.9 5.2E-23 1.8E-27 222.7 1.4 261 284-568 11-319 (386)
94 4ay9_X Follicle-stimulating ho 99.9 9.2E-22 3.1E-26 209.5 11.0 236 41-293 9-257 (350)
95 3cvr_A Invasion plasmid antige 99.9 1.7E-21 5.9E-26 217.7 13.0 215 30-305 33-253 (571)
96 2ast_B S-phase kinase-associat 99.9 2.7E-22 9.3E-27 212.8 6.1 253 284-573 49-314 (336)
97 2o6s_A Variable lymphocyte rec 99.8 3.8E-21 1.3E-25 188.5 13.3 181 40-254 6-186 (208)
98 1h6u_A Internalin H; cell adhe 99.8 1.1E-20 3.9E-25 196.9 16.5 211 308-566 21-231 (308)
99 3e6j_A Variable lymphocyte rec 99.8 2.7E-20 9.1E-25 185.1 15.3 159 34-209 12-170 (229)
100 4b8c_D Glucose-repressible alc 99.8 1.9E-21 6.5E-26 225.9 2.4 233 4-276 126-359 (727)
101 2o6s_A Variable lymphocyte rec 99.8 1.4E-19 4.7E-24 177.4 15.1 180 80-282 10-189 (208)
102 2v9t_B SLIT homolog 2 protein 99.8 1.7E-19 5.7E-24 178.0 15.4 150 58-211 16-165 (220)
103 2v70_A SLIT-2, SLIT homolog 2 99.8 5.7E-20 2E-24 181.4 11.8 157 436-595 15-172 (220)
104 2v9t_B SLIT homolog 2 protein 99.8 9.3E-20 3.2E-24 179.8 11.6 155 436-593 15-169 (220)
105 2v70_A SLIT-2, SLIT homolog 2 99.8 6.6E-19 2.3E-23 173.7 15.8 150 57-210 15-165 (220)
106 3cvr_A Invasion plasmid antige 99.8 4.7E-19 1.6E-23 198.1 15.3 188 361-576 60-254 (571)
107 2xot_A Amphoterin-induced prot 99.8 6.6E-19 2.3E-23 188.1 13.1 159 434-592 41-205 (361)
108 1h6t_A Internalin B; cell adhe 99.8 6.9E-19 2.4E-23 181.7 11.6 172 381-590 43-214 (291)
109 2xot_A Amphoterin-induced prot 99.8 1E-18 3.5E-23 186.7 13.2 175 57-246 22-202 (361)
110 3e6j_A Variable lymphocyte rec 99.8 4.2E-18 1.4E-22 169.2 14.8 154 436-593 23-176 (229)
111 1h6t_A Internalin B; cell adhe 99.8 2.5E-18 8.6E-23 177.5 12.5 172 356-566 43-214 (291)
112 1m9s_A Internalin B; cell inva 99.7 8.4E-18 2.9E-22 190.2 15.8 168 360-541 43-210 (605)
113 1dce_A Protein (RAB geranylger 99.7 6.8E-20 2.3E-24 206.2 -2.0 183 361-566 350-547 (567)
114 1m9s_A Internalin B; cell inva 99.7 4.5E-18 1.5E-22 192.5 12.7 190 362-567 23-212 (605)
115 1w8a_A SLIT protein; signaling 99.7 5.2E-18 1.8E-22 163.4 10.0 155 459-616 11-166 (192)
116 3sb4_A Hypothetical leucine ri 99.7 3.5E-18 1.2E-22 180.1 6.1 292 76-415 24-328 (329)
117 4ezg_A Putative uncharacterize 99.7 3E-17 1E-21 159.0 12.0 153 405-589 41-194 (197)
118 1dce_A Protein (RAB geranylger 99.7 3E-19 1E-23 201.0 -3.3 192 381-595 346-552 (567)
119 1xeu_A Internalin C; cellular 99.7 1.8E-17 6.1E-22 168.3 9.9 171 382-591 17-187 (263)
120 1xeu_A Internalin C; cellular 99.7 1.2E-17 4E-22 169.6 7.9 169 360-567 19-187 (263)
121 4ezg_A Putative uncharacterize 99.7 7E-17 2.4E-21 156.4 12.6 155 379-565 39-194 (197)
122 1w8a_A SLIT protein; signaling 99.7 2E-16 6.9E-21 152.3 13.4 131 57-191 12-143 (192)
123 4b8c_D Glucose-repressible alc 99.7 1.8E-17 6.1E-22 192.6 6.2 143 375-521 215-358 (727)
124 4aoj_A High affinity nerve gro 99.7 1.6E-16 5.4E-21 165.5 11.5 91 698-788 41-137 (329)
125 4asz_A BDNF/NT-3 growth factor 99.7 1.1E-16 3.8E-21 164.3 10.1 91 698-788 13-109 (299)
126 2o6r_A Variable lymphocyte rec 99.7 4.5E-16 1.5E-20 147.9 13.0 135 41-191 7-141 (177)
127 2wfh_A SLIT homolog 2 protein 99.7 2.1E-16 7.3E-21 152.0 10.1 131 459-593 13-143 (193)
128 3sb4_A Hypothetical leucine ri 99.6 1.7E-16 5.9E-21 167.1 9.6 102 479-582 225-327 (329)
129 2ell_A Acidic leucine-rich nuc 99.6 5.5E-16 1.9E-20 145.9 10.8 132 77-211 24-160 (168)
130 2ell_A Acidic leucine-rich nuc 99.6 2.4E-16 8.3E-21 148.4 8.1 133 53-188 24-161 (168)
131 2wfh_A SLIT homolog 2 protein 99.6 2.3E-15 7.8E-20 144.8 14.6 127 57-188 14-140 (193)
132 2je0_A Acidic leucine-rich nuc 99.6 6.7E-16 2.3E-20 142.1 9.4 127 77-206 17-148 (149)
133 4gt4_A Tyrosine-protein kinase 99.6 5.3E-16 1.8E-20 159.9 9.3 91 698-788 26-123 (308)
134 2je0_A Acidic leucine-rich nuc 99.6 5.8E-16 2E-20 142.5 8.4 128 53-183 17-149 (149)
135 4fdw_A Leucine rich hypothetic 99.6 2.9E-14 9.9E-19 153.2 22.9 264 76-370 112-380 (401)
136 2o6r_A Variable lymphocyte rec 99.6 2.7E-15 9.2E-20 142.5 12.6 134 458-594 9-142 (177)
137 4b9d_A Serine/threonine-protei 99.6 1.1E-15 3.6E-20 159.2 10.5 91 698-788 24-117 (350)
138 4fih_A Serine/threonine-protei 99.6 9.5E-16 3.2E-20 159.3 8.0 92 697-788 73-165 (346)
139 4aw0_A HPDK1, 3-phosphoinositi 99.6 1.8E-15 6.2E-20 154.7 9.0 91 698-788 32-126 (311)
140 1a9n_A U2A', U2A'; complex (nu 99.6 2.6E-15 8.9E-20 142.4 9.0 134 72-211 14-153 (176)
141 4fdw_A Leucine rich hypothetic 99.6 4.7E-14 1.6E-18 151.6 19.7 219 361-588 158-382 (401)
142 4fie_A Serine/threonine-protei 99.6 2.2E-15 7.6E-20 160.6 8.4 92 697-788 150-242 (423)
143 3fpq_A Serine/threonine-protei 99.5 1.7E-14 5.7E-19 146.9 10.4 88 701-788 29-123 (290)
144 4g31_A Eukaryotic translation 99.5 1.8E-14 6.3E-19 148.0 10.5 91 698-788 5-109 (299)
145 1a9n_A U2A', U2A'; complex (nu 99.5 1.5E-14 5.2E-19 137.1 9.0 135 451-590 14-154 (176)
146 3omv_A RAF proto-oncogene seri 99.5 2.5E-14 8.5E-19 146.7 10.3 89 697-788 35-125 (307)
147 3hmm_A TGF-beta receptor type- 99.5 2.6E-14 8.8E-19 147.7 10.2 89 698-788 3-95 (303)
148 4g3f_A NF-kappa-beta-inducing 99.5 1.2E-14 4.2E-19 150.5 7.6 87 697-788 57-144 (336)
149 4fs7_A Uncharacterized protein 99.5 1.6E-12 5.4E-17 140.4 24.1 146 379-533 248-393 (394)
150 3hyh_A Carbon catabolite-derep 99.5 2.7E-14 9.4E-19 143.9 9.3 92 697-789 12-107 (275)
151 1ds9_A Outer arm dynein; leuci 99.5 7.4E-16 2.5E-20 149.3 -4.3 132 451-589 43-185 (198)
152 4fs7_A Uncharacterized protein 99.5 5.8E-12 2E-16 136.0 25.8 336 64-461 58-393 (394)
153 3g39_A Variable lymphocyte rec 99.5 1.5E-13 5.1E-18 129.1 11.1 108 483-593 12-119 (170)
154 3g39_A Variable lymphocyte rec 99.5 2.1E-13 7.2E-18 128.1 12.0 104 57-188 13-116 (170)
155 3ubd_A Ribosomal protein S6 ki 99.5 1.4E-14 4.8E-19 148.2 3.8 91 698-788 24-120 (304)
156 4ase_A Vascular endothelial gr 99.5 6.7E-14 2.3E-18 146.9 8.7 98 691-788 57-163 (353)
157 1ds9_A Outer arm dynein; leuci 99.5 1.1E-15 3.8E-20 148.0 -5.2 155 380-565 14-185 (198)
158 2r9u_A Variable lymphocyte rec 99.4 3.5E-13 1.2E-17 127.0 11.9 103 57-187 16-118 (174)
159 2r9u_A Variable lymphocyte rec 99.4 4.1E-13 1.4E-17 126.5 11.1 107 484-593 16-122 (174)
160 3uto_A Twitchin; kinase, muscl 99.4 3.1E-13 1.1E-17 152.0 11.0 92 697-788 156-248 (573)
161 4b99_A Mitogen-activated prote 99.4 6.8E-13 2.3E-17 141.8 9.2 91 698-789 54-153 (398)
162 2ifg_A High affinity nerve gro 99.4 9.8E-13 3.3E-17 139.6 9.5 108 41-164 8-117 (347)
163 3v5w_A G-protein coupled recep 99.3 2.3E-12 8E-17 143.9 10.6 93 697-789 188-287 (689)
164 2c30_A Serine/threonine-protei 99.3 3.8E-12 1.3E-16 133.3 11.2 102 686-787 23-135 (321)
165 4f9c_A Cell division cycle 7-r 99.3 3.3E-12 1.1E-16 135.0 9.8 91 695-787 18-113 (361)
166 3s95_A LIMK-1, LIM domain kina 99.3 1E-11 3.5E-16 129.4 12.0 90 698-787 10-100 (310)
167 3fxz_A Serine/threonine-protei 99.3 8.2E-12 2.8E-16 129.2 11.1 93 696-788 18-111 (297)
168 4aw2_A Serine/threonine-protei 99.3 2.7E-12 9.3E-17 139.5 7.7 99 689-787 65-167 (437)
169 2qkw_B Protein kinase; three-h 99.3 1E-12 3.4E-17 137.9 3.8 101 688-788 29-129 (321)
170 3fe3_A MAP/microtubule affinit 99.3 9.6E-12 3.3E-16 130.4 11.1 93 696-788 13-108 (328)
171 3uim_A Brassinosteroid insensi 99.3 2.9E-12 1E-16 134.7 7.1 107 682-788 14-121 (326)
172 2nru_A Interleukin-1 receptor- 99.2 2.3E-11 7.8E-16 126.6 11.9 103 684-787 11-123 (307)
173 4gt6_A Cell surface protein; l 99.2 6.3E-10 2.2E-14 119.9 23.6 332 68-443 54-389 (394)
174 2yab_A Death-associated protei 99.2 1.6E-11 5.4E-16 130.4 10.6 93 696-788 10-109 (361)
175 2ifg_A High affinity nerve gro 99.2 2E-11 6.9E-16 129.4 10.5 90 500-590 27-117 (347)
176 1o6l_A RAC-beta serine/threoni 99.2 1.7E-11 5.7E-16 128.9 9.6 91 698-788 5-99 (337)
177 3zgw_A Maternal embryonic leuc 99.2 1.3E-11 4.4E-16 130.2 8.8 93 696-788 8-102 (347)
178 2qol_A Ephrin receptor; recept 99.2 1.5E-11 5.1E-16 131.5 9.1 91 698-788 45-140 (373)
179 1kob_A Twitchin; kinase, intra 99.2 2.8E-11 9.5E-16 129.7 11.1 92 697-788 50-142 (387)
180 3v8s_A RHO-associated protein 99.2 9E-12 3.1E-16 134.3 7.2 97 692-788 63-163 (410)
181 3uqc_A Probable conserved tran 99.2 2.5E-11 8.5E-16 124.6 9.7 90 698-787 31-124 (286)
182 4hcu_A Tyrosine-protein kinase 99.2 3E-11 1E-15 123.1 10.2 90 698-788 10-99 (269)
183 2vd5_A DMPK protein; serine/th 99.2 1.2E-11 4E-16 133.5 7.4 98 690-787 53-154 (412)
184 2x4f_A Myosin light chain kina 99.2 1.9E-11 6.5E-16 130.6 9.0 88 701-788 92-180 (373)
185 3kul_A Ephrin type-A receptor 99.2 3.4E-11 1.1E-15 126.3 10.7 91 698-788 49-144 (325)
186 3c0i_A Peripheral plasma membr 99.2 2.3E-11 7.9E-16 129.0 9.5 90 698-787 24-119 (351)
187 1tki_A Titin; serine kinase, m 99.2 4.3E-11 1.5E-15 125.1 11.3 91 697-788 4-95 (321)
188 3p86_A Serine/threonine-protei 99.2 3.9E-11 1.3E-15 124.8 10.9 92 696-788 35-128 (309)
189 4gt6_A Cell surface protein; l 99.2 2.4E-09 8.2E-14 115.4 25.4 133 449-588 258-390 (394)
190 3un9_A NLR family member X1; l 99.2 5.6E-13 1.9E-17 141.8 -3.4 190 360-589 72-283 (372)
191 3qd2_B Eukaryotic translation 99.2 3.6E-11 1.2E-15 126.6 10.5 92 697-788 5-155 (332)
192 1fot_A TPK1 delta, CAMP-depend 99.2 2.7E-11 9.3E-16 126.3 9.3 92 697-788 5-100 (318)
193 2psq_A Fibroblast growth facto 99.2 3E-11 1E-15 129.1 9.8 92 697-788 80-181 (370)
194 4eqm_A Protein kinase; transfe 99.2 4E-11 1.4E-15 123.8 10.5 92 697-788 10-105 (294)
195 2y0a_A Death-associated protei 99.2 3.4E-11 1.2E-15 126.3 10.0 91 698-788 11-108 (326)
196 2bdw_A Hypothetical protein K1 99.2 3.6E-11 1.2E-15 128.0 10.3 92 697-788 28-122 (362)
197 4fvq_A Tyrosine-protein kinase 99.2 3.4E-11 1.1E-15 124.1 9.8 92 697-788 7-106 (289)
198 3cbl_A C-FES, proto-oncogene t 99.2 1.9E-11 6.5E-16 131.1 7.5 91 697-787 113-205 (377)
199 3un9_A NLR family member X1; l 99.2 1.5E-12 5.3E-17 138.4 -1.0 189 334-566 71-284 (372)
200 3ugc_A Tyrosine-protein kinase 99.2 3.2E-11 1.1E-15 124.7 8.9 92 697-788 9-107 (295)
201 3a8x_A Protein kinase C IOTA t 99.2 5.3E-11 1.8E-15 125.6 10.5 91 698-788 9-104 (345)
202 3txo_A PKC-L, NPKC-ETA, protei 99.2 4.1E-11 1.4E-15 126.9 9.5 93 696-788 21-118 (353)
203 3hko_A Calcium/calmodulin-depe 99.2 4E-11 1.4E-15 127.0 9.1 94 693-786 21-120 (345)
204 3f3z_A Calcium/calmodulin-depe 99.2 4E-11 1.4E-15 122.6 8.8 92 697-788 8-100 (277)
205 2w4o_A Calcium/calmodulin-depe 99.2 4.3E-11 1.5E-15 126.7 9.1 91 696-788 51-142 (349)
206 4fr4_A YANK1, serine/threonine 99.2 4.8E-11 1.6E-15 127.5 9.4 91 698-788 15-109 (384)
207 1rdq_E PKA C-alpha, CAMP-depen 99.2 6E-11 2E-15 125.5 10.1 91 698-788 41-135 (350)
208 3soa_A Calcium/calmodulin-depe 99.2 4.9E-11 1.7E-15 130.1 9.6 93 696-788 9-104 (444)
209 3kmu_A ILK, integrin-linked ki 99.2 5.1E-11 1.7E-15 121.4 9.0 90 698-788 10-103 (271)
210 3sxs_A Cytoplasmic tyrosine-pr 99.2 6.5E-11 2.2E-15 120.5 9.7 90 697-787 7-96 (268)
211 3gni_B Strad alpha; kinase fol 99.2 8.3E-11 2.8E-15 126.8 11.0 92 697-788 24-120 (389)
212 3gen_A Tyrosine-protein kinase 99.2 6.7E-11 2.3E-15 121.4 9.7 90 697-787 23-112 (283)
213 1xjd_A Protein kinase C, theta 99.2 4.2E-11 1.5E-15 126.2 8.3 93 695-787 14-111 (345)
214 3uc3_A Serine/threonine-protei 99.1 4.5E-11 1.5E-15 127.2 8.5 90 697-787 19-109 (361)
215 3a62_A Ribosomal protein S6 ki 99.1 4.5E-11 1.5E-15 125.4 8.4 92 697-788 16-115 (327)
216 2ac3_A MAP kinase-interacting 99.1 7.6E-11 2.6E-15 123.2 10.1 91 698-788 12-105 (316)
217 1k9a_A Carboxyl-terminal SRC k 99.1 6.7E-11 2.3E-15 129.9 10.1 89 697-788 192-281 (450)
218 1qcf_A Haematopoetic cell kina 99.1 6.1E-11 2.1E-15 130.4 9.8 90 696-787 186-275 (454)
219 3vhe_A Vascular endothelial gr 99.1 3.1E-11 1.1E-15 128.7 7.2 101 688-788 12-121 (359)
220 3tki_A Serine/threonine-protei 99.1 3.6E-11 1.2E-15 125.9 7.4 92 697-788 6-99 (323)
221 1luf_A Muscle-specific tyrosin 99.1 8.4E-11 2.9E-15 124.4 10.3 93 696-788 45-144 (343)
222 2jam_A Calcium/calmodulin-depe 99.1 6.4E-11 2.2E-15 123.0 9.1 91 697-787 8-99 (304)
223 4euu_A Serine/threonine-protei 99.1 8.1E-11 2.8E-15 123.1 9.6 91 698-788 9-103 (319)
224 4dc2_A Protein kinase C IOTA t 99.1 5.2E-11 1.8E-15 127.6 8.1 92 697-788 51-147 (396)
225 3soc_A Activin receptor type-2 99.1 9.8E-11 3.4E-15 122.6 10.0 90 697-788 23-116 (322)
226 2clq_A Mitogen-activated prote 99.1 1.1E-10 3.6E-15 120.7 10.1 90 699-788 23-113 (295)
227 1opk_A P150, C-ABL, proto-onco 99.1 3.8E-11 1.3E-15 133.5 7.1 90 697-787 219-309 (495)
228 3t9t_A Tyrosine-protein kinase 99.1 9.5E-11 3.2E-15 119.1 9.5 90 698-788 8-97 (267)
229 2y94_A 5'-AMP-activated protei 99.1 6.8E-11 2.3E-15 129.9 9.0 92 697-788 15-110 (476)
230 2a2a_A Death-associated protei 99.1 9.8E-11 3.3E-15 122.6 9.8 92 697-788 11-109 (321)
231 3l9p_A Anaplastic lymphoma kin 99.1 5.4E-11 1.8E-15 127.0 7.7 92 697-788 70-168 (367)
232 3eqc_A Dual specificity mitoge 99.1 9.7E-11 3.3E-15 124.8 9.7 91 698-788 33-125 (360)
233 2acx_A G protein-coupled recep 99.1 1.1E-10 3.8E-15 130.1 10.4 92 697-788 183-278 (576)
234 3is5_A Calcium-dependent prote 99.1 9.4E-11 3.2E-15 120.4 8.9 90 698-787 22-113 (285)
235 3q5i_A Protein kinase; CDPK, m 99.1 1.3E-10 4.5E-15 129.7 10.8 93 696-788 34-140 (504)
236 1x8b_A WEE1HU, WEE1-like prote 99.1 1.4E-10 4.8E-15 119.3 10.1 91 697-787 10-104 (289)
237 3cok_A Serine/threonine-protei 99.1 1.5E-10 5.1E-15 118.4 9.9 92 697-788 10-105 (278)
238 2i0e_A Protein kinase C-beta I 99.1 8.6E-11 3E-15 124.2 8.2 92 696-787 18-114 (353)
239 2ivs_A Proto-oncogene tyrosine 99.1 1.5E-10 5.1E-15 120.8 9.9 92 697-788 22-120 (314)
240 3h4j_B AMPK kdaid, SNF1-like p 99.1 9.1E-11 3.1E-15 123.1 8.2 91 697-788 8-102 (336)
241 2buj_A Serine/threonine-protei 99.1 1.1E-10 3.7E-15 122.0 8.7 91 697-787 28-123 (317)
242 3bhy_A Death-associated protei 99.1 1.3E-10 4.5E-15 119.2 9.2 90 698-787 5-101 (283)
243 2j7t_A Serine/threonine-protei 99.1 9.3E-11 3.2E-15 121.6 8.1 92 696-787 17-109 (302)
244 3lxl_A Tyrosine-protein kinase 99.1 2.1E-10 7.1E-15 120.5 10.8 90 698-787 23-119 (327)
245 3fdn_A Serine/threonine-protei 99.1 1.4E-10 4.9E-15 118.7 9.4 92 696-787 7-102 (279)
246 3ork_A Serine/threonine protei 99.1 5.5E-11 1.9E-15 123.9 6.3 92 697-788 11-110 (311)
247 1fmk_A C-SRC, P60-SRC, tyrosin 99.1 9.3E-11 3.2E-15 128.8 8.4 90 696-787 182-271 (452)
248 3niz_A Rhodanese family protei 99.1 1.5E-10 5.2E-15 120.5 9.5 91 697-788 20-112 (311)
249 3kk8_A Calcium/calmodulin depe 99.1 2.2E-10 7.5E-15 117.6 10.6 92 697-788 5-99 (284)
250 2rku_A Serine/threonine-protei 99.1 2.1E-10 7E-15 118.5 10.3 91 697-787 14-108 (294)
251 2wqm_A Serine/threonine-protei 99.1 2.5E-10 8.7E-15 118.8 11.1 91 697-787 31-125 (310)
252 2pvf_A Fibroblast growth facto 99.1 1.7E-10 5.6E-15 121.6 9.6 92 697-788 34-135 (334)
253 2h6d_A 5'-AMP-activated protei 99.1 2.6E-10 8.8E-15 116.5 10.8 91 697-787 10-104 (276)
254 1phk_A Phosphorylase kinase; g 99.1 2.2E-10 7.5E-15 118.5 10.2 93 696-788 15-118 (298)
255 3lij_A Calcium/calmodulin depe 99.1 1.1E-10 3.8E-15 129.9 8.5 91 697-787 36-129 (494)
256 1t46_A HOMO sapiens V-KIT hard 99.1 1.4E-10 4.8E-15 120.9 8.7 92 697-788 22-121 (313)
257 4ejn_A RAC-alpha serine/threon 99.1 7.1E-11 2.4E-15 129.7 6.8 92 697-788 147-242 (446)
258 3c4z_A Rhodopsin kinase; Ser/T 99.1 1.7E-10 5.6E-15 128.4 9.7 91 698-788 185-279 (543)
259 2owb_A Serine/threonine-protei 99.1 2.2E-10 7.4E-15 120.7 10.2 91 697-787 40-134 (335)
260 2qr7_A Ribosomal protein S6 ki 99.1 1.1E-10 3.6E-15 123.2 7.7 88 697-788 21-110 (342)
261 3dtc_A Mitogen-activated prote 99.1 1.7E-10 5.8E-15 117.5 9.0 91 697-788 6-100 (271)
262 2r5t_A Serine/threonine-protei 99.1 9.7E-11 3.3E-15 124.8 7.4 92 697-788 37-133 (373)
263 3tt0_A Basic fibroblast growth 99.1 1.9E-10 6.6E-15 123.5 9.8 92 697-788 68-169 (382)
264 2h34_A Serine/threonine-protei 99.1 2.3E-10 7.9E-15 119.0 10.1 93 696-788 32-128 (309)
265 2w1i_A JAK2; chromosomal rearr 99.1 2.4E-10 8E-15 120.0 10.2 92 697-788 40-138 (326)
266 3kn6_A Ribosomal protein S6 ki 99.1 2.4E-10 8E-15 119.8 10.1 83 703-788 16-100 (325)
267 2pmi_A Negative RE, cyclin-dep 99.1 1.4E-10 4.7E-15 121.2 8.3 90 697-787 4-95 (317)
268 1u5q_A Serine/threonine protei 99.1 1.8E-10 6E-15 121.9 9.2 89 698-787 54-146 (348)
269 2h8h_A Proto-oncogene tyrosine 99.1 1.2E-10 4.1E-15 130.7 8.2 90 696-787 265-354 (535)
270 1zy4_A Serine/threonine-protei 99.1 2.7E-10 9.3E-15 118.0 10.3 91 697-788 5-109 (303)
271 4agu_A Cyclin-dependent kinase 99.1 3E-10 1E-14 118.3 10.5 91 698-788 3-96 (311)
272 4eut_A Serine/threonine-protei 99.1 1.4E-10 4.8E-15 125.2 8.2 90 698-787 9-102 (396)
273 3nyv_A Calmodulin-domain prote 99.1 1.8E-10 6.1E-15 128.1 9.2 91 698-788 26-120 (484)
274 3lxp_A Non-receptor tyrosine-p 99.1 4.9E-10 1.7E-14 117.1 12.0 91 698-788 31-129 (318)
275 2vgo_A Serine/threonine-protei 99.1 2.5E-10 8.7E-15 117.1 9.5 92 697-788 13-108 (284)
276 1p4o_A Insulin-like growth fac 99.1 1.1E-10 3.6E-15 122.5 6.6 96 692-787 19-121 (322)
277 4e5w_A Tyrosine-protein kinase 99.1 2.8E-10 9.4E-15 118.0 9.6 90 698-787 21-118 (302)
278 3kfa_A Tyrosine-protein kinase 99.1 1.5E-10 5E-15 119.2 7.5 91 696-787 11-102 (288)
279 1rjb_A FL cytokine receptor; k 99.1 2.1E-10 7E-15 121.5 8.7 93 696-788 43-143 (344)
280 3a7i_A MST3 kinase, serine/thr 99.1 3.1E-10 1.1E-14 117.7 9.8 91 697-787 21-113 (303)
281 2zv2_A Calcium/calmodulin-depe 99.1 1.2E-10 4E-15 120.6 6.4 89 697-785 12-129 (298)
282 3mwu_A Calmodulin-domain prote 99.1 1.7E-10 5.9E-15 128.1 8.1 91 697-787 21-114 (486)
283 2w5a_A Serine/threonine-protei 99.1 2.6E-10 8.9E-15 116.7 8.9 91 697-787 5-100 (279)
284 3gbz_A Kinase, CMGC CDK; ssgci 99.1 2.1E-10 7.3E-15 120.4 8.4 93 695-788 31-126 (329)
285 2yfx_A Tyrosine-protein kinase 99.1 2.1E-10 7.3E-15 120.4 8.4 92 697-788 29-127 (327)
286 2eva_A TAK1 kinase - TAB1 chim 99.1 2.2E-10 7.4E-15 119.1 8.3 86 698-788 8-93 (307)
287 1t4h_A Serine/threonine-protei 99.0 4.8E-10 1.6E-14 115.5 10.6 89 699-787 27-122 (290)
288 1ob3_A PFPK5, cell division co 99.0 3.5E-10 1.2E-14 116.3 9.6 89 698-787 2-92 (288)
289 2yex_A Serine/threonine-protei 99.0 2E-10 6.9E-15 117.3 7.6 91 697-787 6-98 (276)
290 2y7j_A Phosphorylase B kinase 99.0 4.5E-10 1.5E-14 119.7 10.5 94 694-787 90-193 (365)
291 3i6u_A CDS1, serine/threonine- 99.0 1.6E-10 5.5E-15 125.5 7.1 92 696-788 133-233 (419)
292 1fvr_A Tyrosine-protein kinase 99.0 4E-10 1.4E-14 118.3 9.9 91 698-788 25-120 (327)
293 1mqb_A Ephrin type-A receptor 99.0 4.2E-10 1.5E-14 118.3 9.7 91 698-788 44-140 (333)
294 1qpc_A LCK kinase; alpha beta 99.0 3.6E-10 1.2E-14 115.6 8.8 89 697-787 12-100 (279)
295 3llt_A Serine/threonine kinase 99.0 3.2E-10 1.1E-14 120.8 8.7 102 685-788 22-129 (360)
296 3gxj_A TGF-beta receptor type- 99.0 4.4E-10 1.5E-14 116.5 9.5 87 698-788 3-95 (303)
297 1u59_A Tyrosine-protein kinase 99.0 7.6E-10 2.6E-14 113.8 11.0 90 698-788 9-103 (287)
298 2vwi_A Serine/threonine-protei 99.0 1.6E-10 5.6E-15 119.8 6.0 92 696-787 13-106 (303)
299 3o0g_A Cell division protein k 99.0 5.4E-10 1.9E-14 115.2 9.8 89 698-787 2-93 (292)
300 2eue_A Carbon catabolite derep 99.0 4.7E-10 1.6E-14 114.5 9.2 90 698-788 13-106 (275)
301 4f0f_A Serine/threonine-protei 99.0 2.9E-10 9.9E-15 116.9 7.6 90 697-788 18-115 (287)
302 3qup_A Tyrosine-protein kinase 99.0 4.4E-10 1.5E-14 117.7 9.2 92 696-787 21-124 (323)
303 2ycf_A Serine/threonine-protei 99.0 3.1E-10 1.1E-14 118.8 8.0 91 697-788 9-108 (322)
304 2xir_A Vascular endothelial gr 99.0 4E-10 1.4E-14 117.7 8.8 99 690-788 19-126 (316)
305 2wei_A Calmodulin-domain prote 99.0 4.3E-10 1.5E-14 115.6 8.6 92 696-787 20-114 (287)
306 2i1m_A Macrophage colony-stimu 99.0 4.3E-10 1.5E-14 118.4 8.8 92 696-787 44-143 (333)
307 1mp8_A Focal adhesion kinase 1 99.0 6.1E-10 2.1E-14 114.1 9.7 91 697-788 14-109 (281)
308 3q4u_A Activin receptor type-1 99.0 9.3E-10 3.2E-14 113.9 10.8 88 697-788 7-100 (301)
309 2ozo_A Tyrosine-protein kinase 99.0 5.3E-10 1.8E-14 127.3 9.6 83 705-788 343-429 (613)
310 2x7f_A TRAF2 and NCK-interacti 99.0 1.9E-10 6.5E-15 120.7 5.5 97 690-787 16-120 (326)
311 3p1a_A MYT1 kinase, membrane-a 99.0 2.4E-10 8.2E-15 119.0 6.0 89 698-787 57-149 (311)
312 3com_A Serine/threonine-protei 99.0 6E-10 2E-14 116.2 9.0 90 695-786 26-116 (314)
313 2i6l_A Mitogen-activated prote 99.0 5.8E-10 2E-14 116.6 8.9 90 697-787 10-114 (320)
314 1vzo_A Ribosomal protein S6 ki 99.0 2.7E-10 9.3E-15 120.9 6.2 92 697-788 53-153 (355)
315 3e7e_A HBUB1, BUB1A, mitotic c 99.0 6E-10 2.1E-14 118.9 8.8 89 696-787 63-160 (365)
316 2pml_X PFPK7, Ser/Thr protein 99.0 1.9E-10 6.5E-15 121.9 4.4 87 697-784 30-133 (348)
317 4fl3_A Tyrosine-protein kinase 99.0 9.2E-10 3.1E-14 125.7 10.3 84 704-788 375-463 (635)
318 1xbb_A Tyrosine-protein kinase 99.0 8.4E-10 2.9E-14 113.7 9.1 91 697-788 15-111 (291)
319 2r3i_A Cell division protein k 99.0 9.7E-10 3.3E-14 113.7 9.5 90 698-788 3-95 (299)
320 4aaa_A Cyclin-dependent kinase 99.0 6.4E-10 2.2E-14 116.9 8.2 91 697-787 24-117 (331)
321 3dls_A PAS domain-containing s 99.0 2.1E-10 7.3E-15 120.6 4.6 93 696-788 22-124 (335)
322 3pg1_A Mitogen-activated prote 99.0 6.8E-10 2.3E-14 118.3 8.4 99 689-788 13-127 (362)
323 3mtl_A Cell division protein k 99.0 2.8E-10 9.6E-15 119.2 5.3 90 698-788 2-93 (324)
324 1byg_A CSK, protein (C-termina 99.0 6.8E-10 2.3E-14 113.5 8.0 88 697-787 20-108 (278)
325 3n9x_A Phosphotransferase; mal 99.0 8.5E-10 2.9E-14 120.4 9.2 91 697-788 25-123 (432)
326 1b6c_B TGF-B superfamily recep 99.0 2.4E-09 8.3E-14 113.1 12.1 91 694-788 38-134 (342)
327 2a19_B Interferon-induced, dou 99.0 4.9E-10 1.7E-14 114.9 6.6 87 697-787 10-113 (284)
328 3c1x_A Hepatocyte growth facto 99.0 6.7E-10 2.3E-14 118.5 7.7 90 699-788 90-185 (373)
329 3dbq_A Dual specificity protei 99.0 1.3E-09 4.6E-14 115.0 10.0 90 698-788 9-102 (343)
330 3poz_A Epidermal growth factor 99.0 8.8E-10 3E-14 115.6 8.4 90 698-788 15-110 (327)
331 3mdy_A Bone morphogenetic prot 99.0 2.2E-09 7.4E-14 113.2 11.4 90 695-788 34-129 (337)
332 3f66_A Hepatocyte growth facto 99.0 1.3E-09 4.4E-14 112.7 9.4 91 698-788 25-121 (298)
333 3pls_A Macrophage-stimulating 98.9 1.5E-09 5.2E-14 112.1 9.8 89 699-787 22-116 (298)
334 3cc6_A Protein tyrosine kinase 98.9 1.4E-09 4.9E-14 111.3 9.3 90 697-787 11-105 (281)
335 1nxk_A MAP kinase-activated pr 98.9 1.1E-09 3.9E-14 117.9 9.0 87 697-788 60-153 (400)
336 1ua2_A CAK, cell division prot 98.9 8E-10 2.7E-14 116.9 7.4 93 695-788 7-105 (346)
337 3rp9_A Mitogen-activated prote 98.9 8.8E-10 3E-14 121.5 7.9 91 697-788 52-150 (458)
338 3m2w_A MAP kinase-activated pr 98.9 1.7E-09 5.9E-14 111.8 9.6 87 697-788 16-109 (299)
339 3nsz_A CK II alpha, casein kin 98.9 1.9E-09 6.6E-14 113.2 10.0 87 698-787 36-126 (330)
340 2izr_A Casein kinase I isoform 98.9 7E-10 2.4E-14 116.6 6.6 87 698-787 9-97 (330)
341 2zmd_A Dual specificity protei 98.9 1.8E-09 6.1E-14 116.1 9.9 90 698-788 56-149 (390)
342 2wtk_C Serine/threonine-protei 98.9 1.8E-09 6E-14 112.1 9.5 90 697-787 4-100 (305)
343 3brb_A Proto-oncogene tyrosine 98.9 1.5E-09 5.1E-14 113.1 8.8 91 696-786 32-133 (313)
344 3pfq_A PKC-B, PKC-beta, protei 98.9 1.1E-09 3.6E-14 126.1 7.9 93 696-788 339-436 (674)
345 4h09_A Hypothetical leucine ri 98.9 9E-08 3.1E-12 102.5 22.5 143 278-431 213-355 (379)
346 3oz6_A Mitogen-activated prote 98.9 1.9E-09 6.5E-14 116.0 9.3 92 695-787 6-103 (388)
347 3lm5_A Serine/threonine-protei 98.9 9.7E-10 3.3E-14 115.3 6.4 93 695-787 25-122 (327)
348 3fme_A Dual specificity mitoge 98.9 2.7E-09 9.2E-14 109.8 9.6 90 697-787 6-98 (290)
349 3eb0_A Putative uncharacterize 98.9 1.4E-09 4.9E-14 116.8 7.7 87 695-786 4-129 (383)
350 3an0_A Dual specificity mitoge 98.9 2.5E-09 8.6E-14 112.8 9.5 90 697-787 50-142 (340)
351 2xrw_A Mitogen-activated prote 98.9 2.9E-09 1E-13 113.7 10.1 90 697-787 24-122 (371)
352 3byv_A Rhoptry kinase; malaria 98.9 6E-10 2E-14 119.4 4.7 90 697-787 72-192 (377)
353 3ll6_A Cyclin G-associated kin 98.9 1.7E-09 5.7E-14 114.0 8.0 89 698-787 28-126 (337)
354 1cm8_A Phosphorylated MAP kina 98.9 1E-09 3.6E-14 116.9 6.4 90 697-787 24-122 (367)
355 2vuw_A Serine/threonine-protei 98.9 1.2E-10 4.1E-15 122.8 -1.1 89 697-786 19-154 (336)
356 3ttj_A Mitogen-activated prote 98.9 1.5E-09 5.1E-14 119.4 7.5 89 697-786 61-158 (464)
357 4h09_A Hypothetical leucine ri 98.9 1.8E-07 6.2E-12 100.1 23.7 284 273-586 60-343 (379)
358 3og7_A AKAP9-BRAF fusion prote 98.9 2.7E-09 9.2E-14 109.7 8.9 89 697-788 23-113 (289)
359 3kex_A Receptor tyrosine-prote 98.9 8.9E-10 3E-14 115.5 4.5 90 698-788 13-108 (325)
360 2j0j_A Focal adhesion kinase 1 98.9 3.7E-09 1.3E-13 121.2 9.9 91 697-788 389-484 (656)
361 3aln_A Dual specificity mitoge 98.9 5.3E-09 1.8E-13 109.7 10.3 89 697-786 21-112 (327)
362 2pzi_A Probable serine/threoni 98.9 1.9E-09 6.4E-14 124.9 7.4 90 698-787 80-177 (681)
363 3g2f_A Bone morphogenetic prot 98.9 3.7E-09 1.3E-13 111.4 8.9 88 697-788 12-106 (336)
364 3lb7_A RAF proto-oncogene seri 98.9 4.1E-09 1.4E-13 109.3 9.1 89 697-788 35-125 (307)
365 2b9h_A MAP kinase FUS3, mitoge 98.9 4.2E-09 1.5E-13 111.7 9.3 90 697-787 10-106 (353)
366 3qyz_A Mitogen-activated prote 98.9 3.7E-09 1.3E-13 112.6 8.7 92 696-788 25-123 (364)
367 3g33_A Cell division protein k 98.8 3.5E-09 1.2E-13 110.0 8.1 92 696-788 7-112 (308)
368 3lzb_A Epidermal growth factor 98.8 3.6E-09 1.2E-13 110.8 8.2 91 697-788 14-110 (327)
369 3qa8_A MGC80376 protein; kinas 98.8 5.9E-10 2E-14 125.6 2.2 92 697-788 13-112 (676)
370 1u46_A ACK-1, activated CDC42 98.8 3E-09 1E-13 109.4 7.4 89 698-787 18-113 (291)
371 1csn_A Casein kinase-1; phosph 98.8 4.6E-09 1.6E-13 108.4 8.7 89 697-788 9-99 (298)
372 2iwi_A Serine/threonine-protei 98.8 1E-09 3.5E-14 114.3 3.6 94 695-788 28-133 (312)
373 2rio_A Serine/threonine-protei 98.8 4.9E-09 1.7E-13 114.4 8.9 87 698-788 15-102 (434)
374 4exu_A Mitogen-activated prote 98.8 3.9E-09 1.3E-13 112.7 7.8 89 697-786 41-138 (371)
375 3cek_A Dual specificity protei 98.8 6.3E-09 2.2E-13 108.3 9.1 92 696-788 26-121 (313)
376 3mi9_A Cell division protein k 98.8 3.5E-09 1.2E-13 112.2 7.0 90 697-787 16-116 (351)
377 2fst_X Mitogen-activated prote 98.8 2.1E-09 7.3E-14 114.3 5.3 90 697-787 28-126 (367)
378 3fhr_A MAP kinase-activated pr 98.8 8.4E-09 2.9E-13 108.5 9.1 89 696-788 26-120 (336)
379 3coi_A Mitogen-activated prote 98.8 4.4E-09 1.5E-13 111.5 6.4 89 697-786 23-120 (353)
380 3rw6_A Nuclear RNA export fact 98.8 3.5E-10 1.2E-14 112.6 -2.1 153 39-204 76-257 (267)
381 3p23_A Serine/threonine-protei 98.8 5.3E-09 1.8E-13 113.8 6.9 87 698-788 24-111 (432)
382 1blx_A Cyclin-dependent kinase 98.8 6.7E-09 2.3E-13 108.8 7.4 92 696-788 9-112 (326)
383 3kvw_A DYRK2, dual specificity 98.8 1.6E-08 5.5E-13 110.0 10.4 90 697-788 96-192 (429)
384 2jii_A Serine/threonine-protei 98.8 3.6E-09 1.2E-13 112.2 5.0 85 698-788 42-151 (352)
385 2v62_A Serine/threonine-protei 98.7 6E-09 2E-13 110.1 6.0 90 698-788 37-145 (345)
386 3op5_A Serine/threonine-protei 98.7 1.1E-08 3.8E-13 108.9 8.1 91 697-788 34-145 (364)
387 1wak_A Serine/threonine-protei 98.7 1.2E-08 4.1E-13 110.2 8.3 90 697-788 36-138 (397)
388 3rgf_A Cyclin-dependent kinase 98.7 8.7E-09 3E-13 111.5 7.0 84 700-786 22-111 (405)
389 2ra8_A Uncharacterized protein 98.7 4.9E-09 1.7E-13 110.3 4.8 83 503-587 251-341 (362)
390 3q60_A ROP5B; pseudokinase, tr 98.7 1.5E-08 5.2E-13 108.2 8.1 89 697-787 61-180 (371)
391 1z57_A Dual specificity protei 98.7 1.7E-08 5.9E-13 106.2 8.3 90 697-788 13-110 (339)
392 3e3p_A Protein kinase, putativ 98.7 1.2E-08 4.2E-13 108.4 7.0 93 691-785 16-116 (360)
393 2y4i_B KSR2, HKSR2, kinase sup 98.7 2.1E-09 7.1E-14 112.3 1.0 91 696-788 31-123 (319)
394 3en9_A Glycoprotease, O-sialog 98.7 2.5E-08 8.6E-13 111.4 9.5 86 701-787 339-432 (540)
395 2ra8_A Uncharacterized protein 98.7 2.6E-08 8.9E-13 104.8 8.1 59 503-563 278-341 (362)
396 3a99_A Proto-oncogene serine/t 98.7 7.3E-09 2.5E-13 108.2 3.9 92 696-787 41-142 (320)
397 3uzp_A CKI-delta, CKID, casein 98.7 2.6E-08 8.8E-13 102.7 8.0 88 697-787 8-97 (296)
398 1j1b_A Glycogen synthase kinas 98.7 1.8E-08 6.2E-13 109.3 6.5 84 698-786 54-144 (420)
399 2dyl_A Dual specificity mitoge 98.7 3.7E-08 1.3E-12 102.6 8.6 88 697-785 24-114 (318)
400 4hgt_A Casein kinase I isoform 98.6 3E-08 1E-12 102.2 7.2 89 696-787 7-97 (296)
401 1q8y_A SR protein kinase; tran 98.6 2.8E-08 9.7E-13 106.2 6.8 89 697-787 18-122 (373)
402 2vx3_A Dual specificity tyrosi 98.6 5.9E-08 2E-12 104.0 9.0 91 696-788 52-149 (382)
403 4e7w_A Glycogen synthase kinas 98.6 3.7E-08 1.3E-12 105.9 6.3 79 698-780 40-124 (394)
404 3sv0_A Casein kinase I-like; t 98.6 7.1E-08 2.4E-12 106.0 8.4 88 697-787 6-95 (483)
405 1zar_A RIO2 kinase; serine kin 98.6 9.6E-08 3.3E-12 97.2 8.2 89 691-783 83-189 (282)
406 2eu9_A Dual specificity protei 98.5 1E-07 3.5E-12 101.0 8.4 90 697-788 18-115 (355)
407 1io0_A Tropomodulin; LRR prote 98.5 1.8E-08 6E-13 95.6 1.5 118 68-186 27-163 (185)
408 4azs_A Methyltransferase WBDD; 98.5 1.2E-07 4.2E-12 106.4 7.7 84 706-789 242-337 (569)
409 3rw6_A Nuclear RNA export fact 98.4 1E-07 3.6E-12 94.7 3.8 81 99-180 168-257 (267)
410 1io0_A Tropomodulin; LRR prote 98.3 1.4E-07 4.9E-12 89.3 2.5 97 92-188 27-137 (185)
411 1zth_A RIO1 serine protein kin 98.0 4.9E-06 1.7E-10 83.4 5.1 82 700-785 49-164 (258)
412 4gyi_A RIO2 kinase; protein ki 97.7 5.2E-06 1.8E-10 86.9 1.0 85 698-784 95-201 (397)
413 3dzo_A Rhoptry kinase domain; 97.6 3.6E-05 1.2E-09 83.0 5.7 57 697-753 77-137 (413)
414 3e4g_A ATP synthase subunit S, 97.5 2.2E-05 7.4E-10 72.2 1.7 35 151-185 115-150 (176)
415 3e4g_A ATP synthase subunit S, 97.5 2.3E-05 7.8E-10 72.0 1.8 82 481-562 62-149 (176)
416 1pgv_A TMD-1, tropomodulin TMD 97.2 7.2E-05 2.5E-09 70.1 1.4 68 71-138 35-111 (197)
417 3tm0_A Aminoglycoside 3'-phosp 97.1 0.00096 3.3E-08 66.7 7.8 91 693-784 9-100 (263)
418 3rfe_A Platelet glycoprotein I 97.0 0.0012 4.2E-08 57.6 6.6 56 57-114 12-68 (130)
419 3rfe_A Platelet glycoprotein I 96.9 0.0014 4.7E-08 57.3 6.6 58 532-591 12-70 (130)
420 3d1u_A Putative fructosamine-3 96.7 0.002 6.9E-08 65.2 6.2 77 701-781 18-97 (288)
421 1pgv_A TMD-1, tropomodulin TMD 96.5 0.0014 4.7E-08 61.4 3.5 91 94-184 34-136 (197)
422 1nd4_A Aminoglycoside 3'-phosp 96.3 0.0017 5.9E-08 64.7 3.0 82 698-782 20-103 (264)
423 3f7w_A Putative fructosamine-3 92.4 0.12 4.2E-06 51.9 5.4 78 700-781 17-97 (288)
424 3dxp_A Putative acyl-COA dehyd 92.2 0.086 3E-06 55.1 4.1 79 702-781 42-128 (359)
425 3jr1_A Putative fructosamine-3 90.7 0.75 2.6E-05 46.6 9.0 76 702-781 40-118 (312)
426 2olc_A MTR kinase, methylthior 88.7 0.33 1.1E-05 51.3 4.8 75 703-779 35-120 (397)
427 4gkh_A Aminoglycoside 3'-phosp 86.5 2.9 9.8E-05 41.1 10.0 77 705-784 31-110 (272)
428 3r70_A Aminoglycoside phosphot 86.4 1.3 4.5E-05 45.0 7.6 74 699-782 38-115 (320)
429 3ovc_A Hygromycin-B 4-O-kinase 84.2 2.9 0.0001 43.3 9.0 75 701-781 44-121 (362)
430 3tdw_A Gentamicin resistance p 82.9 2.5 8.7E-05 42.5 7.7 75 703-783 24-102 (306)
431 3ats_A Putative uncharacterize 76.5 1 3.5E-05 46.6 2.3 80 703-782 25-121 (357)
432 3cxl_A N-chimerin; SH2, RHO-GA 74.2 0.33 1.1E-05 52.3 -2.3 60 703-765 147-215 (463)
433 3sg8_A APH(2'')-ID; antibiotic 70.6 3.1 0.00011 41.7 4.2 75 703-783 25-105 (304)
434 2q83_A YTAA protein; 2635576, 64.5 11 0.00038 38.2 7.0 73 704-781 38-118 (346)
435 1zyl_A Hypothetical protein YI 59.5 20 0.00069 36.0 7.9 75 704-780 32-113 (328)
436 2ppq_A HSK, HK, homoserine kin 54.6 15 0.00051 36.9 5.8 90 688-780 7-109 (322)
437 2lz0_A Uncharacterized protein 43.7 46 0.0016 26.6 5.9 45 516-561 8-52 (100)
438 2lz0_A Uncharacterized protein 41.1 26 0.0009 28.1 4.0 18 92-109 11-28 (100)
439 2pyw_A Uncharacterized protein 35.6 34 0.0012 35.9 5.1 74 702-778 38-122 (420)
440 1nw1_A Choline kinase (49.2 KD 33.9 44 0.0015 35.2 5.6 72 703-780 78-158 (429)
441 3csv_A Aminoglycoside phosphot 27.0 90 0.0031 31.2 6.4 78 704-786 24-104 (333)
442 3feg_A Choline/ethanolamine ki 25.3 49 0.0017 34.1 3.9 73 704-781 56-137 (379)
443 3dxq_A Choline/ethanolamine ki 24.2 44 0.0015 33.0 3.3 69 703-779 23-92 (301)
No 1
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=2.2e-81 Score=740.87 Aligned_cols=610 Identities=33% Similarity=0.510 Sum_probs=474.1
Q ss_pred CccCCCCHHHHHHHHHHHhhcCCCCCccccCCCCCCCCCCCccccccCCCCCcEEEEECCCCCccee---cc--------
Q 039514 2 AAASSNITTDQQALLALKDHIISDPTNLLAHNWTSNASVCTWIGITCDVNSHRVTALDTSQFNLQGT---IP-------- 70 (790)
Q Consensus 2 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~w~~~~~~c~w~gv~c~~~~~~v~~Ldl~~~~l~~~---~~-------- 70 (790)
|+|++..++||+||++||+++. ||. .+.+ |+.+.|||+|.||+|+ .++|+.|||+++.+.|. +|
T Consensus 4 ~~~~~~~~~~~~all~~k~~~~-~~~-~l~~-W~~~~~~C~w~gv~C~--~~~v~~L~L~~~~l~g~~~~l~~~l~~L~~ 78 (768)
T 3rgz_A 4 ASPSQSLYREIHQLISFKDVLP-DKN-LLPD-WSSNKNPCTFDGVTCR--DDKVTSIDLSSKPLNVGFSAVSSSLLSLTG 78 (768)
T ss_dssp ----CCHHHHHHHHHHHHTTCS-CTT-SSTT-CCTTSCGGGSTTEEEE--TTEEEEEECTTSCCCEEHHHHHHHTTTCTT
T ss_pred CccccCCHHHHHHHHHHHhhCC-Ccc-cccC-CCCCCCCcCCcceEEC--CCcEEEEECCCCCcCCccCccChhHhccCc
Confidence 4555557889999999999994 777 7776 9988899999999999 48999999999999887 44
Q ss_pred ---------------ccCCCCCCCCEEECCCCCCcccCCh--hhhCCCCCCEEeCCCCCCcccCCccc-cCCCCCcEEEc
Q 039514 71 ---------------SQLGNLSSLTILNLSHNKLSGSVPS--SIYTMHTLKFLDFTDNQLSGSVSSFV-FNMSSIVDIRL 132 (790)
Q Consensus 71 ---------------~~~~~l~~L~~L~Ls~N~i~~~~~~--~~~~l~~L~~L~Ls~n~l~~~~~~~~-~~l~~L~~L~L 132 (790)
+.|+.+++|++|||++|.+.+..|. .++.+++|++|||++|.+.+..|..+ .++++|++|+|
T Consensus 79 L~~l~~~~~~~~~l~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L 158 (768)
T 3rgz_A 79 LESLFLSNSHINGSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDL 158 (768)
T ss_dssp CCEEECTTSCEEECCCCCCCCTTCCEEECCSSEEEEEGGGGGGGGGCTTCCEEECCSSEEECCSSCCSCCCCTTCSEEEC
T ss_pred ccccCCcCCCcCCCchhhccCCCCCEEECCCCcCCCcCCChHHHhCCCCCCEEECcCCccCCcCCHHHhccCCCCCEEEC
Confidence 5778888899999999999887887 88888899999999888887777665 67788888888
Q ss_pred cCccCcccCchhh--hccCC----------------------CCCEEECCCCcCcccCCcCCCCCCCCCeeecccCcccc
Q 039514 133 TNNRLSGELPKNI--CNYLP----------------------HLKALFLDKNMFHGKIPSALSKCKQLQQLNLQLNNLSG 188 (790)
Q Consensus 133 ~~N~l~~~lp~~~--~~~l~----------------------~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~ 188 (790)
++|.+++..|... +..++ +|++|+|++|.+++.+|. ++++++|++|++++|++++
T Consensus 159 s~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~l~~L~~L~Ls~n~l~~~~~~-l~~l~~L~~L~Ls~n~l~~ 237 (768)
T 3rgz_A 159 SANSISGANVVGWVLSDGCGELKHLAISGNKISGDVDVSRCVNLEFLDVSSNNFSTGIPF-LGDCSALQHLDISGNKLSG 237 (768)
T ss_dssp CSSCCEEETHHHHHHTTCCTTCCEEECCSSEEESCCBCTTCTTCCEEECCSSCCCSCCCB-CTTCCSCCEEECCSSCCCS
T ss_pred CCCccCCcCChhhhhhccCCCCCEEECCCCcccccCCcccCCcCCEEECcCCcCCCCCcc-cccCCCCCEEECcCCcCCC
Confidence 8888776555441 23444 444445555555444444 5555555555555555555
Q ss_pred cCcccccccCCCCceeccccccc-----------ceEEcccccCccccCccccCC-CCCcEEEcccCCCcccCCcchhcC
Q 039514 189 AIPKEIGNLTMLKGISLLYNKLQ-----------EALVLGMNNLVGVLPATIFNM-STLKVLILINNSLSGSLPSRIDLS 256 (790)
Q Consensus 189 ~~~~~~~~l~~L~~L~l~~n~l~-----------~~l~l~~n~l~~~~p~~~~~l-~~L~~L~L~~n~l~~~~p~~~~~~ 256 (790)
.+|..++.+++|++|++++|.+. +.++++.|.+++.+|..+..+ ++|++|++++|.+++.+|..+. .
T Consensus 238 ~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~l~~L~~L~L~~n~l~~~ip~~~~~~~~~L~~L~Ls~n~l~~~~p~~~~-~ 316 (768)
T 3rgz_A 238 DFSRAISTCTELKLLNISSNQFVGPIPPLPLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFG-S 316 (768)
T ss_dssp CHHHHTTTCSSCCEEECCSSCCEESCCCCCCTTCCEEECCSSEEEESCCCCSCTTCTTCSEEECCSSEEEECCCGGGG-G
T ss_pred cccHHHhcCCCCCEEECCCCcccCccCccccCCCCEEECcCCccCCccCHHHHhhcCcCCEEECcCCcCCCccchHHh-c
Confidence 55555555555555555555443 235555555555555555543 5555555555555555554443 4
Q ss_pred CCCcceEeecCCcccccCCcc-ccCCCCCCEEeccCCcccccCcccccCCC-CCccccccCCcccCCCCcccccccCCC-
Q 039514 257 LPTVEVLILALNRFFGTIPSS-ITNASKLTVLELGGNTFSGLIPDTIGNLR-NLEWLNLSKNSLTSSTSKLSFLSSLAN- 333 (790)
Q Consensus 257 l~~L~~L~L~~n~~~~~~p~~-~~~l~~L~~L~l~~n~l~~~~~~~~~~l~-~L~~L~Ls~n~l~~~~~~~~~~~~l~~- 333 (790)
+++|+.|++++|.+.+.+|.. +.++++|++|++++|.+++.+|..+..++ +|++|++++|.+++... ..+..
T Consensus 317 l~~L~~L~L~~n~l~~~ip~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~~L~~L~Ls~N~l~~~~~-----~~~~~~ 391 (768)
T 3rgz_A 317 CSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPIL-----PNLCQN 391 (768)
T ss_dssp CTTCCEEECCSSEEEEECCHHHHTTCTTCCEEECCSSEEEECCCTTHHHHTTTCSEEECCSSEEEEECC-----TTTTCS
T ss_pred CCCccEEECCCCcccCcCCHHHHhcCCCCCEEeCcCCccCccccHHHHhhhcCCcEEEccCCCcCCCcC-----hhhhhc
Confidence 555555555555555555543 55555566666666555555555555554 56666666555543211 12222
Q ss_pred -CCCCCEEEccCCCCcccCCchhhhhcccCcEEEeecCcCcccCchhhhccCCcceeeeccccccCccccccccccccCe
Q 039514 334 -CKKLRSLKLAGNPLDGFLPSSIGNLSKSLETLVIANCSISGNIPQAISNLSNLLTLVLERNKLTGPISITFGRLQKLQG 412 (790)
Q Consensus 334 -l~~L~~L~Ls~n~l~~~~p~~~~~l~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 412 (790)
+++|++|++++|.+.+.+|..+..+ ++|++|++++|.+++.+|..+..+++|+.|++++|.+.+..+..+..+++|++
T Consensus 392 ~~~~L~~L~L~~n~l~~~~p~~l~~l-~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~ 470 (768)
T 3rgz_A 392 PKNTLQELYLQNNGFTGKIPPTLSNC-SELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLET 470 (768)
T ss_dssp TTCCCCEEECCSSEEEEECCGGGGGC-TTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCE
T ss_pred ccCCccEEECCCCccccccCHHHhcC-CCCCEEECcCCcccCcccHHHhcCCCCCEEECCCCcccCcCCHHHcCCCCceE
Confidence 6789999999999988888888877 68999999999999899999999999999999999999888888999999999
Q ss_pred EEeeccccCccCCccccccccccceecccCcccccCCccccCCCCCCeeeccCCccccccCcccccCCCCceEeccCCcc
Q 039514 413 LYLASNNLVGSFPDELCHIGRLAELALLDNRHSGSIPSCVSNLTSLRYLYLGSNRFTFVIPSTFWSLKDILFFDFSSNFL 492 (790)
Q Consensus 413 L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l 492 (790)
|++++|++.+.+|..+..+++|+.|++++|++.+.+|..+..+++|++|++++|++++.+|..+..+++|+.|++++|.+
T Consensus 471 L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l 550 (768)
T 3rgz_A 471 LILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLF 550 (768)
T ss_dssp EECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEEECCGGGGGCTTCCEEECCSSEE
T ss_pred EEecCCcccCcCCHHHhcCCCCCEEEccCCccCCcCChHHhcCCCCCEEECCCCcccCcCCHHHcCCCCCCEEECCCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred ccccccc----------------------------------------------------------------------ccc
Q 039514 493 VGTLSFD----------------------------------------------------------------------IGN 502 (790)
Q Consensus 493 ~~~~~~~----------------------------------------------------------------------~~~ 502 (790)
+|.+|.. +..
T Consensus 551 ~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~ 630 (768)
T 3rgz_A 551 NGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDN 630 (768)
T ss_dssp ESBCCGGGGTTTTCBCCSTTCSCEEEEEECCSCCTTCCSSEEEEECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCSS
T ss_pred CCcCChHHhcccchhhhhccccccccccccccccccccccccccccccccchhhhccccccccccccceecccCchhhhc
Confidence 8766543 334
Q ss_pred cccCceEeCcCCcccccCcccccCCcccCeeeCCCCcccccCCccccCCCCCCEEECCCCcCcccCCccccccCCCCeEe
Q 039514 503 LKVLLGINLSENNLSGDMPATIGGLKDLQFMDLAYNRLEGPIPESFGDLTSLEVLNLSKNKISGSIPKSMEKLFYLRELN 582 (790)
Q Consensus 503 l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 582 (790)
++.|+.|||++|++++.+|..|+++++|+.|+|++|+++|.+|..|+++++|++|||++|+++|.+|..+..+++|++||
T Consensus 631 l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ 710 (768)
T 3rgz_A 631 NGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEID 710 (768)
T ss_dssp SBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEE
T ss_pred cccccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEE
Confidence 57899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcceecCCCCcccCCCCcccccCCcCCCCCCCCCCCCccCCC
Q 039514 583 LSFNELEGEIPSGGIFANFTAESFMGNELLCGLPNLQVQPCKVSK 627 (790)
Q Consensus 583 Ls~N~l~~~~p~~~~~~~~~~~~~~~n~~l~~~p~~~~~~~~~~~ 627 (790)
+++|+++|.+|..+++.++...+|.||+.+||.| +.+|....
T Consensus 711 ls~N~l~g~iP~~~~~~~~~~~~~~gN~~Lcg~~---l~~C~~~~ 752 (768)
T 3rgz_A 711 LSNNNLSGPIPEMGQFETFPPAKFLNNPGLCGYP---LPRCDPSN 752 (768)
T ss_dssp CCSSEEEEECCSSSSGGGSCGGGGCSCTEEESTT---SCCCCSCC
T ss_pred CcCCcccccCCCchhhccCCHHHhcCCchhcCCC---CcCCCCCc
Confidence 9999999999999999999999999999999987 34786544
No 2
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=1.1e-63 Score=589.82 Aligned_cols=526 Identities=33% Similarity=0.484 Sum_probs=463.4
Q ss_pred CcEEEEECCCCCcceeccc--cCCCCCCCCEEECCCCCCcccCChhh-hCCCCCCEEeCCCCCCcccCCcc---c-----
Q 039514 53 HRVTALDTSQFNLQGTIPS--QLGNLSSLTILNLSHNKLSGSVPSSI-YTMHTLKFLDFTDNQLSGSVSSF---V----- 121 (790)
Q Consensus 53 ~~v~~Ldl~~~~l~~~~~~--~~~~l~~L~~L~Ls~N~i~~~~~~~~-~~l~~L~~L~Ls~n~l~~~~~~~---~----- 121 (790)
.+++.|||++|.+.|.+|. .++.+++|++|||++|.+.+..|..+ ..+++|++|||++|++++..+.. +
T Consensus 100 ~~L~~L~Ls~n~l~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~l~~ 179 (768)
T 3rgz_A 100 ASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLSANSISGANVVGWVLSDGCGE 179 (768)
T ss_dssp TTCCEEECCSSEEEEEGGGGGGGGGCTTCCEEECCSSEEECCSSCCSCCCCTTCSEEECCSSCCEEETHHHHHHTTCCTT
T ss_pred CCCCEEECCCCcCCCcCCChHHHhCCCCCCEEECcCCccCCcCCHHHhccCCCCCEEECCCCccCCcCChhhhhhccCCC
Confidence 4678889999998888888 88888888888888888877776654 66777777777777776655443 2
Q ss_pred -----------------cCCCCCcEEEccCccCcccCchhhhccCCCCCEEECCCCcCcccCCcCCCCCCCCCeeecccC
Q 039514 122 -----------------FNMSSIVDIRLTNNRLSGELPKNICNYLPHLKALFLDKNMFHGKIPSALSKCKQLQQLNLQLN 184 (790)
Q Consensus 122 -----------------~~l~~L~~L~L~~N~l~~~lp~~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~N 184 (790)
..+++|++|++++|.+++.+|. +..+++|++|+|++|.+++..|.+|.++++|++|++++|
T Consensus 180 L~~L~Ls~n~l~~~~~~~~l~~L~~L~Ls~n~l~~~~~~--l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~Ls~n 257 (768)
T 3rgz_A 180 LKHLAISGNKISGDVDVSRCVNLEFLDVSSNNFSTGIPF--LGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSN 257 (768)
T ss_dssp CCEEECCSSEEESCCBCTTCTTCCEEECCSSCCCSCCCB--CTTCCSCCEEECCSSCCCSCHHHHTTTCSSCCEEECCSS
T ss_pred CCEEECCCCcccccCCcccCCcCCEEECcCCcCCCCCcc--cccCCCCCEEECcCCcCCCcccHHHhcCCCCCEEECCCC
Confidence 5677788888888888876776 578999999999999999999999999999999999999
Q ss_pred cccccCcccccccCCCCceeccccccc--------------ceEEcccccCccccCccccCCCCCcEEEcccCCCcccCC
Q 039514 185 NLSGAIPKEIGNLTMLKGISLLYNKLQ--------------EALVLGMNNLVGVLPATIFNMSTLKVLILINNSLSGSLP 250 (790)
Q Consensus 185 ~l~~~~~~~~~~l~~L~~L~l~~n~l~--------------~~l~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p 250 (790)
.+++.+|.. .+++|++|++++|.+. +.++++.|.+.+.+|..+.++++|++|++++|.+++.+|
T Consensus 258 ~l~~~~~~~--~l~~L~~L~L~~n~l~~~ip~~~~~~~~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~ip 335 (768)
T 3rgz_A 258 QFVGPIPPL--PLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELP 335 (768)
T ss_dssp CCEESCCCC--CCTTCCEEECCSSEEEESCCCCSCTTCTTCSEEECCSSEEEECCCGGGGGCTTCCEEECCSSEEEEECC
T ss_pred cccCccCcc--ccCCCCEEECcCCccCCccCHHHHhhcCcCCEEECcCCcCCCccchHHhcCCCccEEECCCCcccCcCC
Confidence 999877765 8899999999998764 368999999999999999999999999999999999999
Q ss_pred cchhcCCCCcceEeecCCcccccCCccccCCC-CCCEEeccCCcccccCcccccC--CCCCccccccCCcccCCCCcccc
Q 039514 251 SRIDLSLPTVEVLILALNRFFGTIPSSITNAS-KLTVLELGGNTFSGLIPDTIGN--LRNLEWLNLSKNSLTSSTSKLSF 327 (790)
Q Consensus 251 ~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~-~L~~L~l~~n~l~~~~~~~~~~--l~~L~~L~Ls~n~l~~~~~~~~~ 327 (790)
...+..+++|+.|++++|.+.+.+|..+..++ +|+.|++++|.+++..|..+.. +++|++|++++|.+++..+
T Consensus 336 ~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~p---- 411 (768)
T 3rgz_A 336 MDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIP---- 411 (768)
T ss_dssp HHHHTTCTTCCEEECCSSEEEECCCTTHHHHTTTCSEEECCSSEEEEECCTTTTCSTTCCCCEEECCSSEEEEECC----
T ss_pred HHHHhcCCCCCEEeCcCCccCccccHHHHhhhcCCcEEEccCCCcCCCcChhhhhcccCCccEEECCCCccccccC----
Confidence 88666899999999999999999999998887 8999999999999888888777 8899999999999885432
Q ss_pred cccCCCCCCCCEEEccCCCCcccCCchhhhhcccCcEEEeecCcCcccCchhhhccCCcceeeeccccccCccccccccc
Q 039514 328 LSSLANCKKLRSLKLAGNPLDGFLPSSIGNLSKSLETLVIANCSISGNIPQAISNLSNLLTLVLERNKLTGPISITFGRL 407 (790)
Q Consensus 328 ~~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l 407 (790)
..+..+++|++|++++|.+.+.+|..+..+ ++|++|++++|.+.+.+|..+..+++|++|++++|++++..|..+..+
T Consensus 412 -~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l-~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l 489 (768)
T 3rgz_A 412 -PTLSNCSELVSLHLSFNYLSGTIPSSLGSL-SKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNC 489 (768)
T ss_dssp -GGGGGCTTCCEEECCSSEEESCCCGGGGGC-TTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGC
T ss_pred -HHHhcCCCCCEEECcCCcccCcccHHHhcC-CCCCEEECCCCcccCcCCHHHcCCCCceEEEecCCcccCcCCHHHhcC
Confidence 457888999999999999998899888887 689999999999999999999999999999999999998888899999
Q ss_pred cccCeEEeeccccCccCCccccccccccceecccCcccccCCccccCCCCCCeeeccCCccccccCccc-----------
Q 039514 408 QKLQGLYLASNNLVGSFPDELCHIGRLAELALLDNRHSGSIPSCVSNLTSLRYLYLGSNRFTFVIPSTF----------- 476 (790)
Q Consensus 408 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~----------- 476 (790)
++|++|++++|++.+.+|.++..+++|+.|++++|++.+.+|..+..+++|++|++++|++++.+|..+
T Consensus 490 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~~~~~~~~~ 569 (768)
T 3rgz_A 490 TNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANF 569 (768)
T ss_dssp TTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEEECCGGGGGCTTCCEEECCSSEEESBCCGGGGTTTTCBCCST
T ss_pred CCCCEEEccCCccCCcCChHHhcCCCCCEEECCCCcccCcCCHHHcCCCCCCEEECCCCccCCcCChHHhcccchhhhhc
Confidence 999999999999999999999999999999999999999999999999999999999999987777544
Q ss_pred -----------------------------------------------------------ccCCCCceEeccCCccccccc
Q 039514 477 -----------------------------------------------------------WSLKDILFFDFSSNFLVGTLS 497 (790)
Q Consensus 477 -----------------------------------------------------------~~l~~L~~L~ls~N~l~~~~~ 497 (790)
..++.|+.||+++|+++|.+|
T Consensus 570 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~~L~~LdLs~N~l~g~ip 649 (768)
T 3rgz_A 570 IAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIP 649 (768)
T ss_dssp TCSCEEEEEECCSCCTTCCSSEEEEECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCSSSBCCCEEECCSSCCBSCCC
T ss_pred cccccccccccccccccccccccccccccccchhhhccccccccccccceecccCchhhhccccccEEECcCCcccccCC
Confidence 234678899999999999999
Q ss_pred ccccccccCceEeCcCCcccccCcccccCCcccCeeeCCCCcccccCCccccCCCCCCEEECCCCcCcccCCccccccCC
Q 039514 498 FDIGNLKVLLGINLSENNLSGDMPATIGGLKDLQFMDLAYNRLEGPIPESFGDLTSLEVLNLSKNKISGSIPKSMEKLFY 577 (790)
Q Consensus 498 ~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 577 (790)
..+++++.|+.|+|++|++++.+|..|+++++|++|||++|+++|.+|..++++++|++|++++|+++|.+|.. ..+..
T Consensus 650 ~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ls~N~l~g~iP~~-~~~~~ 728 (768)
T 3rgz_A 650 KEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEM-GQFET 728 (768)
T ss_dssp GGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEECCSSEEEEECCSS-SSGGG
T ss_pred HHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECcCCcccccCCCc-hhhcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999975 34455
Q ss_pred CCeEeCCCCcce
Q 039514 578 LRELNLSFNELE 589 (790)
Q Consensus 578 L~~L~Ls~N~l~ 589 (790)
+......+|+--
T Consensus 729 ~~~~~~~gN~~L 740 (768)
T 3rgz_A 729 FPPAKFLNNPGL 740 (768)
T ss_dssp SCGGGGCSCTEE
T ss_pred CCHHHhcCCchh
Confidence 666777888743
No 3
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=1.5e-59 Score=549.92 Aligned_cols=562 Identities=23% Similarity=0.248 Sum_probs=449.8
Q ss_pred CcEEEEECCCCCcceeccccCCCCCCCCEEECCCCCCcccCChhhhCCCCCCEEeCCCCCCcccCCccccCCCCCcEEEc
Q 039514 53 HRVTALDTSQFNLQGTIPSQLGNLSSLTILNLSHNKLSGSVPSSIYTMHTLKFLDFTDNQLSGSVSSFVFNMSSIVDIRL 132 (790)
Q Consensus 53 ~~v~~Ldl~~~~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 132 (790)
.+++.||+++|.+++..+..|..+++|++|+|++|.+++..|.+|..+++|++|+|++|++++..+..|.++++|++|++
T Consensus 25 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L 104 (680)
T 1ziw_A 25 TNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHL 104 (680)
T ss_dssp TTCSEEECCSSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEEC
T ss_pred CCCcEEECCCCCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCCccCccChhhhccCCCCCEEEC
Confidence 46889999999999888888999999999999999999888999999999999999999999877778999999999999
Q ss_pred cCccCcccCchhhhccCCCCCEEECCCCcCcccCCcCCCCCCCCCeeecccCcccccCccccc--ccCCCCceecccccc
Q 039514 133 TNNRLSGELPKNICNYLPHLKALFLDKNMFHGKIPSALSKCKQLQQLNLQLNNLSGAIPKEIG--NLTMLKGISLLYNKL 210 (790)
Q Consensus 133 ~~N~l~~~lp~~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~--~l~~L~~L~l~~n~l 210 (790)
++|.++ .+|...|..+++|++|+|++|.+++..|..|.++++|++|++++|.+++..+..+. .+++|++|++++|.+
T Consensus 105 ~~n~l~-~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l 183 (680)
T 1ziw_A 105 MSNSIQ-KIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQI 183 (680)
T ss_dssp CSSCCC-CCCSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSCCCCBCHHHHGGGTTCEESEEECTTCCC
T ss_pred CCCccC-ccChhHccccCCCCEEECCCCcccccCchhhcccccCCEEEccCCcccccCHHHhhccccccccEEECCCCcc
Confidence 999998 66666668899999999999999988888899999999999999999887777665 457888877777765
Q ss_pred cc-------------eEEcccccCccccCccc---cCCCCCcEEEcccCCCcccCCcchhcCC--CCcceEeecCCcccc
Q 039514 211 QE-------------ALVLGMNNLVGVLPATI---FNMSTLKVLILINNSLSGSLPSRIDLSL--PTVEVLILALNRFFG 272 (790)
Q Consensus 211 ~~-------------~l~l~~n~l~~~~p~~~---~~l~~L~~L~L~~n~l~~~~p~~~~~~l--~~L~~L~L~~n~~~~ 272 (790)
.. .+.++.+.+.......+ ...++|+.|++++|.+++..|..+. .+ ++|+.|++++|.+.+
T Consensus 184 ~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~~~~~~-~l~~~~L~~L~Ls~n~l~~ 262 (680)
T 1ziw_A 184 KEFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFL-GLKWTNLTMLDLSYNNLNV 262 (680)
T ss_dssp CCBCTTGGGGSSEECEEECTTCCCHHHHHHHHHHHHTTSCCCEEECTTSCCCEECTTTTG-GGGGSCCCEEECTTSCCCE
T ss_pred cccChhhhhhhhhhhhhhccccccChhhHHHHHHHhhhccccEEEccCCcccccChhHhh-ccCcCCCCEEECCCCCcCc
Confidence 42 12222222221111100 0235678888888888766555443 33 348889999888888
Q ss_pred cCCccccCCCCCCEEeccCCcccccCcccccCCCCCccccccCCcccCCCCccccc----ccCCCCCCCCEEEccCCCCc
Q 039514 273 TIPSSITNASKLTVLELGGNTFSGLIPDTIGNLRNLEWLNLSKNSLTSSTSKLSFL----SSLANCKKLRSLKLAGNPLD 348 (790)
Q Consensus 273 ~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~----~~l~~l~~L~~L~Ls~n~l~ 348 (790)
..|..|..+++|++|++++|.+++..|..|..+++|++|++++|..........++ ..+..+++|++|++++|.+.
T Consensus 263 ~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~~~~~~~~~~~~lp~i~~~~~~~l~~L~~L~l~~n~l~ 342 (680)
T 1ziw_A 263 VGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQWLKCLEHLNMEDNDIP 342 (680)
T ss_dssp ECTTTTTTCTTCCEEECCSCCBSEECTTTTTTCTTCCEEECTTCBCCC------CCEECTTTTTTCTTCCEEECCSCCBC
T ss_pred cCcccccCcccccEeeCCCCccCccChhhhcCCCCccEEeccchhhhcccccccccccChhhcccCCCCCEEECCCCccC
Confidence 88888888888999999999888888888888888999988877544211100000 14677889999999999998
Q ss_pred ccCCchhhhhcccCcEEEeecCcCcc--cCchhhhcc--CCcceeeeccccccCccccccccccccCeEEeeccccCccC
Q 039514 349 GFLPSSIGNLSKSLETLVIANCSISG--NIPQAISNL--SNLLTLVLERNKLTGPISITFGRLQKLQGLYLASNNLVGSF 424 (790)
Q Consensus 349 ~~~p~~~~~l~~~L~~L~l~~n~l~~--~~p~~~~~l--~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~ 424 (790)
+..+..+..+ ++|++|++++|.+.. ..+..|..+ ++|+.|++++|++++..+..|..+++|+.|++++|.+.+.+
T Consensus 343 ~~~~~~~~~l-~~L~~L~Ls~n~~~~~~l~~~~f~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 421 (680)
T 1ziw_A 343 GIKSNMFTGL-INLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQEL 421 (680)
T ss_dssp CCCTTTTTTC-TTCCEEECTTCBSCCCEECTTTTGGGTTSCCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCEEEC
T ss_pred CCChhHhccc-cCCcEEECCCCchhhhhcchhhhcccccCcCceEECCCCCCCeEChhhhhCCCCCCEEeCCCCcCcccc
Confidence 8777777776 679999999887542 223334433 58999999999999888888889999999999999998766
Q ss_pred C-ccccccccccceecccCcccccCCccccCCCCCCeeeccCCccc--cccCcccccCCCCceEeccCCccccccccccc
Q 039514 425 P-DELCHIGRLAELALLDNRHSGSIPSCVSNLTSLRYLYLGSNRFT--FVIPSTFWSLKDILFFDFSSNFLVGTLSFDIG 501 (790)
Q Consensus 425 ~-~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~L~~N~l~--~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~ 501 (790)
| ..+..+++|++|++++|++.+..+..+..+++|++|++++|.+. +..|..+..+++|+.|++++|.+++..+..+.
T Consensus 422 ~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~p~~~~~l~~L~~L~Ls~N~l~~i~~~~~~ 501 (680)
T 1ziw_A 422 TGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTILDLSNNNIANINDDMLE 501 (680)
T ss_dssp CSGGGTTCTTCCEEECCSCSEEECCTTTTTTCTTCCEEECTTSCCBCTTCSSCTTTTCTTCCEEECCSSCCCCCCTTTTT
T ss_pred CcccccCcccccEEecCCCCcceeChhhhhcCcccccchhccccccccccCCcccccCCCCCEEECCCCCCCcCChhhhc
Confidence 5 67888999999999999998888888999999999999999886 56788899999999999999999988888889
Q ss_pred ccccCceEeCcCCcccccCc--------ccccCCcccCeeeCCCCcccccCCccccCCCCCCEEECCCCcCcccCCcccc
Q 039514 502 NLKVLLGINLSENNLSGDMP--------ATIGGLKDLQFMDLAYNRLEGPIPESFGDLTSLEVLNLSKNKISGSIPKSME 573 (790)
Q Consensus 502 ~l~~L~~L~Ls~N~l~~~~~--------~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~ 573 (790)
++++|++|++++|++++..+ ..|.++++|++|+|++|+++...+..|.++++|++|+|++|++++..+..|.
T Consensus 502 ~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~ 581 (680)
T 1ziw_A 502 GLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFELKIIDLGLNNLNTLPASVFN 581 (680)
T ss_dssp TCTTCCEEECCSSCCGGGGSTTSTTSCCCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTT
T ss_pred cccccCEEeCCCCCccccchhhccCCcchhhcCCCCCCEEECCCCCCCCCCHHHcccccCcceeECCCCCCCcCCHhHhC
Confidence 99999999999999986532 2378889999999999999976667899999999999999999977777788
Q ss_pred ccCCCCeEeCCCCcceecCCCC-c-ccCCCCcccccCCcCCCCCCC
Q 039514 574 KLFYLRELNLSFNELEGEIPSG-G-IFANFTAESFMGNELLCGLPN 617 (790)
Q Consensus 574 ~l~~L~~L~Ls~N~l~~~~p~~-~-~~~~~~~~~~~~n~~l~~~p~ 617 (790)
.+++|+.|++++|++++..|.. . .+.++....+.+|++.|+|+.
T Consensus 582 ~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~l~l~~N~~~c~c~~ 627 (680)
T 1ziw_A 582 NQVSLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRFNPFDCTCES 627 (680)
T ss_dssp TCTTCCEEECTTSCCCBCCHHHHHHHHTTCSEEECTTCCCCBCCCC
T ss_pred CCCCCCEEECCCCcCCccChhHhcccccccCEEEccCCCcccCCcc
Confidence 9999999999999998765542 1 456778888899999998764
No 4
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=5.5e-58 Score=536.67 Aligned_cols=535 Identities=23% Similarity=0.251 Sum_probs=474.6
Q ss_pred CcEEEEECCCCCcceeccccCCCCCCCCEEECCCCCCcccCChhhhCCCCCCEEeCCCCCCcccCCccccCCCCCcEEEc
Q 039514 53 HRVTALDTSQFNLQGTIPSQLGNLSSLTILNLSHNKLSGSVPSSIYTMHTLKFLDFTDNQLSGSVSSFVFNMSSIVDIRL 132 (790)
Q Consensus 53 ~~v~~Ldl~~~~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 132 (790)
.+++.||+++|.+++..|..|..+++|++|+|++|.++++.+.+|..+++|++|+|++|++++..+..|.++++|++|++
T Consensus 49 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 128 (680)
T 1ziw_A 49 SQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDL 128 (680)
T ss_dssp TTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCSCTTTTCTTCCEEEC
T ss_pred CcCcEEECCCCccCccCHHHHhcccCcCEEECCCCccCccChhhhccCCCCCEEECCCCccCccChhHccccCCCCEEEC
Confidence 46889999999999999999999999999999999999888889999999999999999999998999999999999999
Q ss_pred cCccCcccCchhhhccCCCCCEEECCCCcCcccCCcCCC--CCCCCCeeecccCcccccCcccccccCCCCceecccccc
Q 039514 133 TNNRLSGELPKNICNYLPHLKALFLDKNMFHGKIPSALS--KCKQLQQLNLQLNNLSGAIPKEIGNLTMLKGISLLYNKL 210 (790)
Q Consensus 133 ~~N~l~~~lp~~~~~~l~~L~~L~L~~N~i~~~~p~~~~--~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~l 210 (790)
++|.+++..|. .+..+++|++|++++|.+++..+..+. .+++|++|++++|.+++..|..|..+.+|+.|++..+.+
T Consensus 129 s~n~l~~~~~~-~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~~~l 207 (680)
T 1ziw_A 129 SHNGLSSTKLG-TQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQIKEFSPGCFHAIGRLFGLFLNNVQL 207 (680)
T ss_dssp CSSCCSCCCCC-SSSCCTTCCEEECCSSCCCCBCHHHHGGGTTCEESEEECTTCCCCCBCTTGGGGSSEECEEECTTCCC
T ss_pred CCCcccccCch-hhcccccCCEEEccCCcccccCHHHhhccccccccEEECCCCcccccChhhhhhhhhhhhhhcccccc
Confidence 99999955554 447899999999999999988777654 568999999999999999999999999999999887654
Q ss_pred c----------------ceEEcccccCccccCccccCCCC--CcEEEcccCCCcccCCcchhcCCCCcceEeecCCcccc
Q 039514 211 Q----------------EALVLGMNNLVGVLPATIFNMST--LKVLILINNSLSGSLPSRIDLSLPTVEVLILALNRFFG 272 (790)
Q Consensus 211 ~----------------~~l~l~~n~l~~~~p~~~~~l~~--L~~L~L~~n~l~~~~p~~~~~~l~~L~~L~L~~n~~~~ 272 (790)
. +.++++.|.+.+..|..+.+++. |+.|++++|.+++..|..+ ..+++|+.|++++|.+.+
T Consensus 208 ~~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~~~~~~~l~~~~L~~L~Ls~n~l~~~~~~~~-~~l~~L~~L~L~~n~l~~ 286 (680)
T 1ziw_A 208 GPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVVGNDSF-AWLPQLEYFFLEYNNIQH 286 (680)
T ss_dssp HHHHHHHHHHHHTTSCCCEEECTTSCCCEECTTTTGGGGGSCCCEEECTTSCCCEECTTTT-TTCTTCCEEECCSCCBSE
T ss_pred ChhhHHHHHHHhhhccccEEEccCCcccccChhHhhccCcCCCCEEECCCCCcCccCcccc-cCcccccEeeCCCCccCc
Confidence 2 46999999999999999988865 9999999999986555544 478999999999999999
Q ss_pred cCCccccCCCCCCEEeccCCcccc-----cCc----ccccCCCCCccccccCCcccCCCCcccccccCCCCCCCCEEEcc
Q 039514 273 TIPSSITNASKLTVLELGGNTFSG-----LIP----DTIGNLRNLEWLNLSKNSLTSSTSKLSFLSSLANCKKLRSLKLA 343 (790)
Q Consensus 273 ~~p~~~~~l~~L~~L~l~~n~l~~-----~~~----~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~l~~l~~L~~L~Ls 343 (790)
..|..+.++++|+.|++++|...+ .+| ..|..+++|++|++++|.+++.++ ..+..+++|++|+++
T Consensus 287 ~~~~~~~~l~~L~~L~L~~~~~~~~~~~~~lp~i~~~~~~~l~~L~~L~l~~n~l~~~~~-----~~~~~l~~L~~L~Ls 361 (680)
T 1ziw_A 287 LFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQWLKCLEHLNMEDNDIPGIKS-----NMFTGLINLKYLSLS 361 (680)
T ss_dssp ECTTTTTTCTTCCEEECTTCBCCC------CCEECTTTTTTCTTCCEEECCSCCBCCCCT-----TTTTTCTTCCEEECT
T ss_pred cChhhhcCCCCccEEeccchhhhcccccccccccChhhcccCCCCCEEECCCCccCCCCh-----hHhccccCCcEEECC
Confidence 999999999999999999876542 122 378899999999999999998754 357889999999999
Q ss_pred CCCCcc--cCCchhhhhc-ccCcEEEeecCcCcccCchhhhccCCcceeeeccccccCcc-ccccccccccCeEEeeccc
Q 039514 344 GNPLDG--FLPSSIGNLS-KSLETLVIANCSISGNIPQAISNLSNLLTLVLERNKLTGPI-SITFGRLQKLQGLYLASNN 419 (790)
Q Consensus 344 ~n~l~~--~~p~~~~~l~-~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~-~~~~~~l~~L~~L~L~~n~ 419 (790)
+|.+.. ..+..+..+. ++|+.|++++|++++..|..|..+++|+.|++++|.+.+.. +..|..+++|++|++++|+
T Consensus 362 ~n~~~~~~l~~~~f~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~n~ 441 (680)
T 1ziw_A 362 NSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNK 441 (680)
T ss_dssp TCBSCCCEECTTTTGGGTTSCCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCEEECCSGGGTTCTTCCEEECCSCS
T ss_pred CCchhhhhcchhhhcccccCcCceEECCCCCCCeEChhhhhCCCCCCEEeCCCCcCccccCcccccCcccccEEecCCCC
Confidence 997542 2222333221 47999999999999999999999999999999999998654 4788999999999999999
Q ss_pred cCccCCccccccccccceecccCccc--ccCCccccCCCCCCeeeccCCccccccCcccccCCCCceEeccCCccccccc
Q 039514 420 LVGSFPDELCHIGRLAELALLDNRHS--GSIPSCVSNLTSLRYLYLGSNRFTFVIPSTFWSLKDILFFDFSSNFLVGTLS 497 (790)
Q Consensus 420 l~~~~~~~~~~l~~L~~L~l~~n~~~--~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~ 497 (790)
+.+..+..+..+++|+.|++.+|.+. +..|..+..+++|++|++++|+++++.+..|..+++|+.|++++|.+++..+
T Consensus 442 l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~p~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~ 521 (680)
T 1ziw_A 442 YLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWK 521 (680)
T ss_dssp EEECCTTTTTTCTTCCEEECTTSCCBCTTCSSCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCGGGGS
T ss_pred cceeChhhhhcCcccccchhccccccccccCCcccccCCCCCEEECCCCCCCcCChhhhccccccCEEeCCCCCccccch
Confidence 99999999999999999999999986 5688999999999999999999999999999999999999999999987533
Q ss_pred --------ccccccccCceEeCcCCcccccCcccccCCcccCeeeCCCCcccccCCccccCCCCCCEEECCCCcCcccCC
Q 039514 498 --------FDIGNLKVLLGINLSENNLSGDMPATIGGLKDLQFMDLAYNRLEGPIPESFGDLTSLEVLNLSKNKISGSIP 569 (790)
Q Consensus 498 --------~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p 569 (790)
..+.+++.|+.|+|++|+++.+.+..|.++++|+.|+|++|++++.++..|.++++|+.|+|++|++++..|
T Consensus 522 ~~~~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~ 601 (680)
T 1ziw_A 522 HANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEK 601 (680)
T ss_dssp TTSTTSCCCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCCCBCCH
T ss_pred hhccCCcchhhcCCCCCCEEECCCCCCCCCCHHHcccccCcceeECCCCCCCcCCHhHhCCCCCCCEEECCCCcCCccCh
Confidence 237889999999999999997777789999999999999999998888889999999999999999998888
Q ss_pred cccc-ccCCCCeEeCCCCcceecCCC
Q 039514 570 KSME-KLFYLRELNLSFNELEGEIPS 594 (790)
Q Consensus 570 ~~~~-~l~~L~~L~Ls~N~l~~~~p~ 594 (790)
..+. .+++|+.|++++|++.+.++.
T Consensus 602 ~~~~~~~~~L~~l~l~~N~~~c~c~~ 627 (680)
T 1ziw_A 602 KVFGPAFRNLTELDMRFNPFDCTCES 627 (680)
T ss_dssp HHHHHHHTTCSEEECTTCCCCBCCCC
T ss_pred hHhcccccccCEEEccCCCcccCCcc
Confidence 8787 789999999999999988775
No 5
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=9.5e-58 Score=527.47 Aligned_cols=520 Identities=21% Similarity=0.213 Sum_probs=432.7
Q ss_pred CcEEEEECCCCCcceeccccCCCCCCCCEEECCCCCCcccCChhhhCCCCCCEEeCCCCCCcccCCccccCCCCCcEEEc
Q 039514 53 HRVTALDTSQFNLQGTIPSQLGNLSSLTILNLSHNKLSGSVPSSIYTMHTLKFLDFTDNQLSGSVSSFVFNMSSIVDIRL 132 (790)
Q Consensus 53 ~~v~~Ldl~~~~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 132 (790)
..++.||+++|.+++..|.+|..+++|++|+|++|.+.++.|.+|..+++|++|+|++|++++..|..|.++++|++|++
T Consensus 33 ~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 112 (606)
T 3t6q_A 33 NSTECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPLIFMAETALSGPKALKHLFF 112 (606)
T ss_dssp TTCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCSEECTTTTSSCTTCCEEEC
T ss_pred CcCcEEEccCCccCcCChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCcccccChhhhcccccccEeec
Confidence 45788899999888888888888999999999999888888888889999999999999888888888888999999999
Q ss_pred cCccCcccCchhhhccCCCCCEEECCCCcCcccCCcCCCCCCCCCeeecccCcccccCcccccccCCCCceecccccccc
Q 039514 133 TNNRLSGELPKNICNYLPHLKALFLDKNMFHGKIPSALSKCKQLQQLNLQLNNLSGAIPKEIGNLTMLKGISLLYNKLQE 212 (790)
Q Consensus 133 ~~N~l~~~lp~~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 212 (790)
++|.++ .++...+..+++|++|++++|.+++..+..+..+++|++|++++|.+++..|..|+.+++|+.+.
T Consensus 113 ~~n~i~-~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~l~-------- 183 (606)
T 3t6q_A 113 IQTGIS-SIDFIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLSKEDMSSLQQATNLS-------- 183 (606)
T ss_dssp TTSCCS-CGGGSCCTTCTTCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSCCCEECHHHHHTTTTCCSEE--------
T ss_pred cccCcc-cCCcchhccCCcccEEECCCCcccccCcccccCCcccCEEEcccCcccccChhhhhhhcccceeE--------
Confidence 999888 55444457888899999999988875555566688899999999988888888888888888321
Q ss_pred eEEcccccCccccCccccCCCCCcEEEcccCCCcccCCcchhcCCCCcceEeecCCccc-----ccCCccccCCC--CCC
Q 039514 213 ALVLGMNNLVGVLPATIFNMSTLKVLILINNSLSGSLPSRIDLSLPTVEVLILALNRFF-----GTIPSSITNAS--KLT 285 (790)
Q Consensus 213 ~l~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~~l~~L~~L~L~~n~~~-----~~~p~~~~~l~--~L~ 285 (790)
++++.|.+.+..|..+. ..+|+.|++++|.. ++..+ ..+..+....+....+. ...+..+..+. +|+
T Consensus 184 -L~l~~n~l~~~~~~~~~-~~~L~~L~l~~~~~---~~~~~-~~l~~~~l~~l~~~~~~~~~~~~i~~~~~~~l~~~~L~ 257 (606)
T 3t6q_A 184 -LNLNGNDIAGIEPGAFD-SAVFQSLNFGGTQN---LLVIF-KGLKNSTIQSLWLGTFEDMDDEDISPAVFEGLCEMSVE 257 (606)
T ss_dssp -EECTTCCCCEECTTTTT-TCEEEEEECTTCSC---HHHHH-HHTTTCEEEEEECCCCTTSCCCCCCGGGGGGGGGSEEE
T ss_pred -EecCCCccCccChhHhh-hccccccccCCchh---HHHHh-hhccccchhheechhhccccccccChhHhchhhcCcee
Confidence 44555555566665544 46788888888762 22211 12333333333222221 11122333332 789
Q ss_pred EEeccCCcccccCcccccCCCCCccccccCCcccCCCCcccccccCCCCCCCCEEEccCCCCcccCCchhhhhcccCcEE
Q 039514 286 VLELGGNTFSGLIPDTIGNLRNLEWLNLSKNSLTSSTSKLSFLSSLANCKKLRSLKLAGNPLDGFLPSSIGNLSKSLETL 365 (790)
Q Consensus 286 ~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~~L~~L 365 (790)
.|++++|.+++..+..|..+++|++|++++|.++.++. .+..+++|++|++++|.+.+..|..+..+ ++|++|
T Consensus 258 ~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~lp~------~l~~l~~L~~L~l~~n~l~~~~~~~~~~l-~~L~~L 330 (606)
T 3t6q_A 258 SINLQKHYFFNISSNTFHCFSGLQELDLTATHLSELPS------GLVGLSTLKKLVLSANKFENLCQISASNF-PSLTHL 330 (606)
T ss_dssp EEECTTCCCSSCCTTTTTTCTTCSEEECTTSCCSCCCS------SCCSCTTCCEEECTTCCCSBGGGGCGGGC-TTCSEE
T ss_pred EEEeecCccCccCHHHhccccCCCEEeccCCccCCCCh------hhcccccCCEEECccCCcCcCchhhhhcc-CcCCEE
Confidence 99999999999988889999999999999999987663 47788999999999999998878788877 689999
Q ss_pred EeecCcCcccCch-hhhccCCcceeeeccccccCcc--ccccccccccCeEEeeccccCccCCccccccccccceecccC
Q 039514 366 VIANCSISGNIPQ-AISNLSNLLTLVLERNKLTGPI--SITFGRLQKLQGLYLASNNLVGSFPDELCHIGRLAELALLDN 442 (790)
Q Consensus 366 ~l~~n~l~~~~p~-~~~~l~~L~~L~L~~N~l~~~~--~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n 442 (790)
++++|.+.+.+|. .+..+++|++|++++|.+.+.. +..+..+++|++|++++|.+.+..|..+..+++|+.|++++|
T Consensus 331 ~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n 410 (606)
T 3t6q_A 331 SIKGNTKRLELGTGCLENLENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFT 410 (606)
T ss_dssp ECCSCSSCCBCCSSTTTTCTTCCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEECTTC
T ss_pred ECCCCCcccccchhhhhccCcCCEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCeEECCCC
Confidence 9999999866654 5899999999999999998776 677899999999999999999999999999999999999999
Q ss_pred cccccCCc-cccCCCCCCeeeccCCccccccCcccccCCCCceEeccCCccccc---ccccccccccCceEeCcCCcccc
Q 039514 443 RHSGSIPS-CVSNLTSLRYLYLGSNRFTFVIPSTFWSLKDILFFDFSSNFLVGT---LSFDIGNLKVLLGINLSENNLSG 518 (790)
Q Consensus 443 ~~~~~~p~-~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~---~~~~~~~l~~L~~L~Ls~N~l~~ 518 (790)
++.+..|. .+..+++|++|++++|.+++..|..+..+++|+.|++++|.+++. .+..+..+++|++|++++|++++
T Consensus 411 ~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~ 490 (606)
T 3t6q_A 411 RLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSS 490 (606)
T ss_dssp CEECCTTCCTTTTCTTCCEEECTTCCCBTTCTTTTTTCTTCCEEECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCE
T ss_pred cCCCcccchhhhCcccCCEEECCCCccCCcCHHHHhCCCCCCEEECCCCCCCccccccchhhccCCCccEEECCCCccCc
Confidence 99877655 488999999999999999999999999999999999999999873 23568899999999999999999
Q ss_pred cCcccccCCcccCeeeCCCCcccccCCccccCCCCCCEEECCCCcCcccCCccccccCCCCeEeCCCCcceecCCCC
Q 039514 519 DMPATIGGLKDLQFMDLAYNRLEGPIPESFGDLTSLEVLNLSKNKISGSIPKSMEKLFYLRELNLSFNELEGEIPSG 595 (790)
Q Consensus 519 ~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~ 595 (790)
..|..|.++++|++|+|++|++++..|..|.+++.| +|++++|++++..|..+..+++|++|++++|++.+.++..
T Consensus 491 ~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L-~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~~~ 566 (606)
T 3t6q_A 491 IDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHLKGI-YLNLASNHISIILPSLLPILSQQRTINLRQNPLDCTCSNI 566 (606)
T ss_dssp ECTTTTTTCTTCCEEECCSSCCCGGGGGGGTTCCSC-EEECCSSCCCCCCGGGHHHHHTSSEEECTTCCEECSGGGH
T ss_pred cChhhhccccCCCEEECCCCccCcCChhHhCccccc-EEECcCCcccccCHhhcccCCCCCEEeCCCCCccccCCcH
Confidence 999999999999999999999999999999999999 9999999999988989999999999999999999877643
No 6
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=3.7e-56 Score=514.21 Aligned_cols=519 Identities=21% Similarity=0.190 Sum_probs=423.9
Q ss_pred CcEEEEECCCCCcceeccccCCCCCCCCEEECCCCCCcccCChhhhCCCCCCEEeCCCCCCcccCCccccCCCCCcEEEc
Q 039514 53 HRVTALDTSQFNLQGTIPSQLGNLSSLTILNLSHNKLSGSVPSSIYTMHTLKFLDFTDNQLSGSVSSFVFNMSSIVDIRL 132 (790)
Q Consensus 53 ~~v~~Ldl~~~~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 132 (790)
.+++.||+++|.+++..+.+|..+++|++|+|++|.++++.|.+|..+++|++|+|++|++++..|..|.++++|++|++
T Consensus 32 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L 111 (606)
T 3vq2_A 32 SSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLVA 111 (606)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCCCCTTSSTTCTTCCEEEC
T ss_pred CCcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcccccChhhcCCcccCCEEEc
Confidence 46788888888888888888888888888888888888888888888888888888888888888888888888888888
Q ss_pred cCccCcccCchhhhccCCCCCEEECCCCcCcc-cCCcCCCCCCCCCeeecccCcccccCcccccccCCCCceeccccccc
Q 039514 133 TNNRLSGELPKNICNYLPHLKALFLDKNMFHG-KIPSALSKCKQLQQLNLQLNNLSGAIPKEIGNLTMLKGISLLYNKLQ 211 (790)
Q Consensus 133 ~~N~l~~~lp~~~~~~l~~L~~L~L~~N~i~~-~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~ 211 (790)
++|.++ .+|...+..+++|++|++++|.+++ .+|..|+++++|++|++++|++++..+..|+.+++|+...
T Consensus 112 ~~n~l~-~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~~l------- 183 (606)
T 3vq2_A 112 VETKLA-SLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVNDLQFLRENPQVN------- 183 (606)
T ss_dssp TTSCCC-CSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEECTTTTHHHHHCTTCC-------
T ss_pred cCCccc-cccccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCCcceecChhhhhhhhcccccc-------
Confidence 888887 5554445778888888888888876 5688888888888888888888888888888777765200
Q ss_pred ceEEcccccCccccCccccCCCCCcEEEcccCCCcccCCcchhcCCCCcceEeecCCccccc------CCccccCCC--C
Q 039514 212 EALVLGMNNLVGVLPATIFNMSTLKVLILINNSLSGSLPSRIDLSLPTVEVLILALNRFFGT------IPSSITNAS--K 283 (790)
Q Consensus 212 ~~l~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~~l~~L~~L~L~~n~~~~~------~p~~~~~l~--~ 283 (790)
..++++.|.+.++.+..+... +|+.|++++|.+.+.........++.++.+.+..+.+.+. .+..+..+. .
T Consensus 184 ~~L~l~~n~l~~~~~~~~~~~-~L~~L~L~~n~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~l~~~~~~~~~~l~~l~ 262 (606)
T 3vq2_A 184 LSLDMSLNPIDFIQDQAFQGI-KLHELTLRGNFNSSNIMKTCLQNLAGLHVHRLILGEFKDERNLEIFEPSIMEGLCDVT 262 (606)
T ss_dssp CEEECTTCCCCEECTTTTTTC-EEEEEEEESCCSCHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCGGGGTTGGGSE
T ss_pred ceeeccCCCcceeCcccccCc-eeeeeeccCCccchhHHHHHhccccccccccccccccccCCcccccChHHhhhhhhcc
Confidence 124455555555555555444 8899999998887544444455788888877765443321 112222222 3
Q ss_pred CCEEec-cCCcccccCcccccCCCCCccccccCCcccCCCCcccccccCCCCCCCCEEEccCCCCcccCCchhhhhcccC
Q 039514 284 LTVLEL-GGNTFSGLIPDTIGNLRNLEWLNLSKNSLTSSTSKLSFLSSLANCKKLRSLKLAGNPLDGFLPSSIGNLSKSL 362 (790)
Q Consensus 284 L~~L~l-~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~~L 362 (790)
++.+++ ..|.+.+..|. +..+++|+.|++++|.+...+ .+..+++|++|++++|.+ +.+|. + .+ ++|
T Consensus 263 l~~l~l~~~~~~~~~~~~-~~~l~~L~~L~l~~~~~~~l~-------~l~~~~~L~~L~l~~n~l-~~lp~-~-~l-~~L 330 (606)
T 3vq2_A 263 IDEFRLTYTNDFSDDIVK-FHCLANVSAMSLAGVSIKYLE-------DVPKHFKWQSLSIIRCQL-KQFPT-L-DL-PFL 330 (606)
T ss_dssp EEEEEECCCTTCCGGGGS-CGGGTTCSEEEEESCCCCCCC-------CCCTTCCCSEEEEESCCC-SSCCC-C-CC-SSC
T ss_pred Hhheeccccccccccccc-cccCCCCCEEEecCccchhhh-------hccccccCCEEEcccccC-ccccc-C-CC-Ccc
Confidence 556666 77788888777 899999999999999987754 467788999999999999 56774 4 44 689
Q ss_pred cEEEeecCcCcccCchhhhccCCcceeeeccccccCcc--ccccccccccCeEEeeccccCccCCccccccccccceecc
Q 039514 363 ETLVIANCSISGNIPQAISNLSNLLTLVLERNKLTGPI--SITFGRLQKLQGLYLASNNLVGSFPDELCHIGRLAELALL 440 (790)
Q Consensus 363 ~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~--~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~ 440 (790)
++|++++|...+.. .+..+++|++|++++|.+++.. +..+..+++|++|++++|.+.+ +|..+..+++|+.|+++
T Consensus 331 ~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~l~ 407 (606)
T 3vq2_A 331 KSLTLTMNKGSISF--KKVALPSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAII-MSANFMGLEELQHLDFQ 407 (606)
T ss_dssp CEEEEESCSSCEEC--CCCCCTTCCEEECCSSCEEEEEECCHHHHCCSCCCEEECCSCSEEE-ECCCCTTCTTCCEEECT
T ss_pred ceeeccCCcCccch--hhccCCCCCEEECcCCccCCCcchhhhhccCCcccEeECCCCcccc-chhhccCCCCCCeeECC
Confidence 99999999665443 5778999999999999998763 6778899999999999999885 66888999999999999
Q ss_pred cCcccccCC-ccccCCCCCCeeeccCCccccccCcccccCCCCceEeccCCcccc-cccccccccccCceEeCcCCcccc
Q 039514 441 DNRHSGSIP-SCVSNLTSLRYLYLGSNRFTFVIPSTFWSLKDILFFDFSSNFLVG-TLSFDIGNLKVLLGINLSENNLSG 518 (790)
Q Consensus 441 ~n~~~~~~p-~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~-~~~~~~~~l~~L~~L~Ls~N~l~~ 518 (790)
+|++.+..| ..+..+++|++|++++|.+++..|..+..+++|+.|++++|.+++ ..|..+..+++|+.|++++|++++
T Consensus 408 ~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~ 487 (606)
T 3vq2_A 408 HSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQ 487 (606)
T ss_dssp TSEEESTTTTTTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCE
T ss_pred CCccCCccChhhhhccccCCEEECcCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhccCCCCCEEECCCCcCCc
Confidence 999998877 688999999999999999999999999999999999999999988 478889999999999999999999
Q ss_pred cCcccccCCcccCeeeCCCCcccccCCccccCCCCCCEEECCCCcCcccCCccccccC-CCCeEeCCCCcceecCCCCc
Q 039514 519 DMPATIGGLKDLQFMDLAYNRLEGPIPESFGDLTSLEVLNLSKNKISGSIPKSMEKLF-YLRELNLSFNELEGEIPSGG 596 (790)
Q Consensus 519 ~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~-~L~~L~Ls~N~l~~~~p~~~ 596 (790)
..|..|.++++|++|+|++|++++.+|..|.++++|++|++++|+++ .+|..+..++ +|++|++++|++.+.++..+
T Consensus 488 ~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~-~~p~~~~~l~~~L~~l~l~~N~~~c~c~~~~ 565 (606)
T 3vq2_A 488 ISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIE-TSKGILQHFPKSLAFFNLTNNSVACICEHQK 565 (606)
T ss_dssp ECTTTTTTCTTCCEEECCSSCCSCEEGGGTTTCTTCCEEECTTSCCC-CEESCGGGSCTTCCEEECCSCCCCCSSTTHH
T ss_pred cChhhhcccccCCEEECCCCcCCCcCHHHccCCCcCCEEECCCCcCc-ccCHhHhhhcccCcEEEccCCCcccCCccHH
Confidence 99999999999999999999999988999999999999999999998 6777788887 59999999999998777543
No 7
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=5e-55 Score=504.73 Aligned_cols=493 Identities=21% Similarity=0.211 Sum_probs=421.2
Q ss_pred CcEEEEECCCCCcceeccccCCCCCCCCEEECCCCCCcccCChhhhCCCCCCEEeCCCCCCcccCCccccCCCCCcEEEc
Q 039514 53 HRVTALDTSQFNLQGTIPSQLGNLSSLTILNLSHNKLSGSVPSSIYTMHTLKFLDFTDNQLSGSVSSFVFNMSSIVDIRL 132 (790)
Q Consensus 53 ~~v~~Ldl~~~~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 132 (790)
.+++.||+++|.+++..|.+|..+++|++|+|++|.+.+..|..|..+++|++|++++|++++..+..|.++++|++|++
T Consensus 57 ~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~l~~~~~~~l~~L~~L~L 136 (606)
T 3t6q_A 57 INLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPLIFMAETALSGPKALKHLFFIQTGISSIDFIPLHNQKTLESLYL 136 (606)
T ss_dssp TTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCSEECTTTTSSCTTCCEEECTTSCCSCGGGSCCTTCTTCCEEEC
T ss_pred ccceEEECCCCccceeChhhccCccccCeeeCCCCcccccChhhhcccccccEeeccccCcccCCcchhccCCcccEEEC
Confidence 46889999999999999999999999999999999999999999999999999999999999988899999999999999
Q ss_pred cCccCcccCchhhhccCCCCCEEECCCCcCcccCCcCCCCCCCCC--eeecccCcccccCcccccccCCCCceecccccc
Q 039514 133 TNNRLSGELPKNICNYLPHLKALFLDKNMFHGKIPSALSKCKQLQ--QLNLQLNNLSGAIPKEIGNLTMLKGISLLYNKL 210 (790)
Q Consensus 133 ~~N~l~~~lp~~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~~L~--~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~l 210 (790)
++|++++ ++...+..+++|++|++++|.+++..|..|+.+++|+ .|++++|.+++..|..|.. .+|+.|++++|..
T Consensus 137 ~~n~l~~-~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~l~L~l~~n~l~~~~~~~~~~-~~L~~L~l~~~~~ 214 (606)
T 3t6q_A 137 GSNHISS-IKLPKGFPTEKLKVLDFQNNAIHYLSKEDMSSLQQATNLSLNLNGNDIAGIEPGAFDS-AVFQSLNFGGTQN 214 (606)
T ss_dssp CSSCCCC-CCCCTTCCCTTCCEEECCSSCCCEECHHHHHTTTTCCSEEEECTTCCCCEECTTTTTT-CEEEEEECTTCSC
T ss_pred CCCcccc-cCcccccCCcccCEEEcccCcccccChhhhhhhcccceeEEecCCCccCccChhHhhh-ccccccccCCchh
Confidence 9999984 4322224599999999999999999999999999999 8999999999888887765 5788877776641
Q ss_pred cceEEcccccCccccCccccCCCCCcEEEcccCCCcc----cCCcchhcCC--CCcceEeecCCcccccCCccccCCCCC
Q 039514 211 QEALVLGMNNLVGVLPATIFNMSTLKVLILINNSLSG----SLPSRIDLSL--PTVEVLILALNRFFGTIPSSITNASKL 284 (790)
Q Consensus 211 ~~~l~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~----~~p~~~~~~l--~~L~~L~L~~n~~~~~~p~~~~~l~~L 284 (790)
++..+..+..++...+....+.. .++...+..+ ..++.+++++|.+.+..+..|..+++|
T Consensus 215 --------------~~~~~~~l~~~~l~~l~~~~~~~~~~~~i~~~~~~~l~~~~L~~L~l~~n~l~~~~~~~~~~l~~L 280 (606)
T 3t6q_A 215 --------------LLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGLCEMSVESINLQKHYFFNISSNTFHCFSGL 280 (606)
T ss_dssp --------------HHHHHHHTTTCEEEEEECCCCTTSCCCCCCGGGGGGGGGSEEEEEECTTCCCSSCCTTTTTTCTTC
T ss_pred --------------HHHHhhhccccchhheechhhccccccccChhHhchhhcCceeEEEeecCccCccCHHHhccccCC
Confidence 23344444444443333222211 1222222222 278899999999988888889999999
Q ss_pred CEEeccCCcccccCcccccCCCCCccccccCCcccCCCCcccccccCCCCCCCCEEEccCCCCcccCCch-hhhhcccCc
Q 039514 285 TVLELGGNTFSGLIPDTIGNLRNLEWLNLSKNSLTSSTSKLSFLSSLANCKKLRSLKLAGNPLDGFLPSS-IGNLSKSLE 363 (790)
Q Consensus 285 ~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~-~~~l~~~L~ 363 (790)
++|++++|.++. +|..+..+++|++|++++|.++..++ ..+..+++|++|++++|.+.+.+|.. +..+ ++|+
T Consensus 281 ~~L~l~~n~l~~-lp~~l~~l~~L~~L~l~~n~l~~~~~-----~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l-~~L~ 353 (606)
T 3t6q_A 281 QELDLTATHLSE-LPSGLVGLSTLKKLVLSANKFENLCQ-----ISASNFPSLTHLSIKGNTKRLELGTGCLENL-ENLR 353 (606)
T ss_dssp SEEECTTSCCSC-CCSSCCSCTTCCEEECTTCCCSBGGG-----GCGGGCTTCSEEECCSCSSCCBCCSSTTTTC-TTCC
T ss_pred CEEeccCCccCC-CChhhcccccCCEEECccCCcCcCch-----hhhhccCcCCEEECCCCCcccccchhhhhcc-CcCC
Confidence 999999999984 57788999999999999999887643 35778899999999999988666654 5555 6899
Q ss_pred EEEeecCcCcccC--chhhhccCCcceeeeccccccCccccccccccccCeEEeeccccCccCCcc-ccccccccceecc
Q 039514 364 TLVIANCSISGNI--PQAISNLSNLLTLVLERNKLTGPISITFGRLQKLQGLYLASNNLVGSFPDE-LCHIGRLAELALL 440 (790)
Q Consensus 364 ~L~l~~n~l~~~~--p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~-~~~l~~L~~L~l~ 440 (790)
+|++++|.+.+.. |..+..+++|++|++++|.+.+..+..|..+++|++|++++|.+.+..+.. +..+++|+.|+++
T Consensus 354 ~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~ 433 (606)
T 3t6q_A 354 ELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQSPFQNLHLLKVLNLS 433 (606)
T ss_dssp EEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEECTTCCEECCTTCCTTTTCTTCCEEECT
T ss_pred EEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCeEECCCCcCCCcccchhhhCcccCCEEECC
Confidence 9999999998766 778999999999999999999888889999999999999999998776654 8899999999999
Q ss_pred cCcccccCCccccCCCCCCeeeccCCccccc---cCcccccCCCCceEeccCCcccccccccccccccCceEeCcCCccc
Q 039514 441 DNRHSGSIPSCVSNLTSLRYLYLGSNRFTFV---IPSTFWSLKDILFFDFSSNFLVGTLSFDIGNLKVLLGINLSENNLS 517 (790)
Q Consensus 441 ~n~~~~~~p~~~~~l~~L~~L~L~~N~l~~~---~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 517 (790)
+|.+.+..|..+..+++|++|++++|++++. .+..+..+++|+.|++++|.+++..|..+..++.|++|+|++|+++
T Consensus 434 ~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 513 (606)
T 3t6q_A 434 HSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRLT 513 (606)
T ss_dssp TCCCBTTCTTTTTTCTTCCEEECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCC
T ss_pred CCccCCcCHHHHhCCCCCCEEECCCCCCCccccccchhhccCCCccEEECCCCccCccChhhhccccCCCEEECCCCccC
Confidence 9999988899999999999999999999863 3367889999999999999999999999999999999999999999
Q ss_pred ccCcccccCCcccCeeeCCCCcccccCCccccCCCCCCEEECCCCcCcccCC
Q 039514 518 GDMPATIGGLKDLQFMDLAYNRLEGPIPESFGDLTSLEVLNLSKNKISGSIP 569 (790)
Q Consensus 518 ~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p 569 (790)
+..|..|.+++.| +|++++|++++.+|..+..+++|+.|++++|++....+
T Consensus 514 ~~~~~~l~~l~~L-~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 564 (606)
T 3t6q_A 514 SSSIEALSHLKGI-YLNLASNHISIILPSLLPILSQQRTINLRQNPLDCTCS 564 (606)
T ss_dssp GGGGGGGTTCCSC-EEECCSSCCCCCCGGGHHHHHTSSEEECTTCCEECSGG
T ss_pred cCChhHhCccccc-EEECcCCcccccCHhhcccCCCCCEEeCCCCCccccCC
Confidence 9999999999999 99999999999999999999999999999999986443
No 8
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=4.6e-55 Score=521.47 Aligned_cols=523 Identities=20% Similarity=0.191 Sum_probs=440.5
Q ss_pred CCCccccccCCCCCcEEEEECCCCCcceeccccCCCCCCCCEEECCCCCCcc-cCChhhhCCCCCCEEeCCCCCCcccCC
Q 039514 40 VCTWIGITCDVNSHRVTALDTSQFNLQGTIPSQLGNLSSLTILNLSHNKLSG-SVPSSIYTMHTLKFLDFTDNQLSGSVS 118 (790)
Q Consensus 40 ~c~w~gv~c~~~~~~v~~Ldl~~~~l~~~~~~~~~~l~~L~~L~Ls~N~i~~-~~~~~~~~l~~L~~L~Ls~n~l~~~~~ 118 (790)
.|.|..|.+ ...+++.|||++|.+++..|.+|..+++|++|||++|.+.+ +.|.+|..+++|++|+|++|++++..|
T Consensus 13 ~~~L~~vP~--lp~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p 90 (844)
T 3j0a_A 13 FCNLTQVPQ--VLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHP 90 (844)
T ss_dssp CCCSSCCCS--SCTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECT
T ss_pred CCCCCCCCC--CCCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCH
Confidence 467888887 34689999999999999999999999999999999996544 458999999999999999999999999
Q ss_pred ccccCCCCCcEEEccCccCcccCchh-hhccCCCCCEEECCCCcCcccCC-cCCCCCCCCCeeecccCcccccCcccccc
Q 039514 119 SFVFNMSSIVDIRLTNNRLSGELPKN-ICNYLPHLKALFLDKNMFHGKIP-SALSKCKQLQQLNLQLNNLSGAIPKEIGN 196 (790)
Q Consensus 119 ~~~~~l~~L~~L~L~~N~l~~~lp~~-~~~~l~~L~~L~L~~N~i~~~~p-~~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 196 (790)
..|.++++|++|+|++|.+++.+|.. .+..+++|++|+|++|.+++..+ ..|+++++|++|+|++|.+++..+..++.
T Consensus 91 ~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~l~~ 170 (844)
T 3j0a_A 91 DAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEP 170 (844)
T ss_dssp TSSCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGGGHH
T ss_pred hHccCCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHHHccc
Confidence 99999999999999999999766654 46889999999999999998765 57999999999999999999999999988
Q ss_pred c--CCCCceecccccccceEEcccccCccccCccccCCCC------CcEEEcccCCCcccCCcchhcC--CCCcceEeec
Q 039514 197 L--TMLKGISLLYNKLQEALVLGMNNLVGVLPATIFNMST------LKVLILINNSLSGSLPSRIDLS--LPTVEVLILA 266 (790)
Q Consensus 197 l--~~L~~L~l~~n~l~~~l~l~~n~l~~~~p~~~~~l~~------L~~L~L~~n~l~~~~p~~~~~~--l~~L~~L~L~ 266 (790)
+ ++|+.|+++.|.+. +..|..+..+.+ |+.|++++|.+++.++..+... .+.++.+.++
T Consensus 171 l~~~~L~~L~L~~n~l~-----------~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~ 239 (844)
T 3j0a_A 171 LQGKTLSFFSLAANSLY-----------SRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILA 239 (844)
T ss_dssp HHHCSSCCCEECCSBSC-----------CCCCCCCCSSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECC
T ss_pred ccCCccceEECCCCccc-----------cccccchhhcCCccccCceeEEecCCCcCchhHHHHHHhhcCcccccceecc
Confidence 8 88998776666554 455555555544 9999999999988887766533 3566777766
Q ss_pred C---------CcccccCCccccCC--CCCCEEeccCCcccccCcccccCCCCCccccccCCcccCCCCcccccccCCCCC
Q 039514 267 L---------NRFFGTIPSSITNA--SKLTVLELGGNTFSGLIPDTIGNLRNLEWLNLSKNSLTSSTSKLSFLSSLANCK 335 (790)
Q Consensus 267 ~---------n~~~~~~p~~~~~l--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~l~~l~ 335 (790)
. +.+.+..+..|..+ ++|+.|++++|.+.+..+..|..+++|+.|+|++|.++...+ ..+..++
T Consensus 240 ~~~~~~~~~~~~l~~~~~~~f~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~-----~~~~~l~ 314 (844)
T 3j0a_A 240 HHIMGAGFGFHNIKDPDQNTFAGLARSSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIAD-----EAFYGLD 314 (844)
T ss_dssp SSCCBCSSSCSSSTTGGGTTTTTTTTSCCCEEECTTCCCCEECSCCSSSCCCCCEEEEESCCCCEECT-----TTTTTCS
T ss_pred cccccccccccccCCCChhhhhccccCCccEEECCCCcccccChhhhhcCCCCCEEECCCCcCCCCCh-----HHhcCCC
Confidence 3 23333344455554 689999999999999989999999999999999999987653 3578889
Q ss_pred CCCEEEccCCCCcccCCchhhhhcccCcEEEeecCcCcccCchhhhccCCcceeeeccccccCccccccccccccCeEEe
Q 039514 336 KLRSLKLAGNPLDGFLPSSIGNLSKSLETLVIANCSISGNIPQAISNLSNLLTLVLERNKLTGPISITFGRLQKLQGLYL 415 (790)
Q Consensus 336 ~L~~L~Ls~n~l~~~~p~~~~~l~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 415 (790)
+|++|++++|.+.+..|..+..+ ++|++|++++|.+.+..+..|..+++|++|++++|.+++.. .+++|+.|++
T Consensus 315 ~L~~L~Ls~N~l~~~~~~~~~~l-~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~i~-----~~~~L~~L~l 388 (844)
T 3j0a_A 315 NLQVLNLSYNLLGELYSSNFYGL-PKVAYIDLQKNHIAIIQDQTFKFLEKLQTLDLRDNALTTIH-----FIPSIPDIFL 388 (844)
T ss_dssp SCCEEEEESCCCSCCCSCSCSSC-TTCCEEECCSCCCCCCCSSCSCSCCCCCEEEEETCCSCCCS-----SCCSCSEEEE
T ss_pred CCCEEECCCCCCCccCHHHhcCC-CCCCEEECCCCCCCccChhhhcCCCCCCEEECCCCCCCccc-----CCCCcchhcc
Confidence 99999999999998888888877 68999999999999888888999999999999999988543 3788999999
Q ss_pred eccccCccCCccccccccccceecccCcccccCC-ccccCCCCCCeeeccCCccccccCc-ccccCCCCceEeccCCccc
Q 039514 416 ASNNLVGSFPDELCHIGRLAELALLDNRHSGSIP-SCVSNLTSLRYLYLGSNRFTFVIPS-TFWSLKDILFFDFSSNFLV 493 (790)
Q Consensus 416 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~p-~~~~~l~~L~~L~L~~N~l~~~~~~-~~~~l~~L~~L~ls~N~l~ 493 (790)
++|++. .+|.. ...++.|++++|++.+... ..+..+++|++|+|++|++++..+. .+..+++|+.|++++|.++
T Consensus 389 ~~N~l~-~l~~~---~~~l~~L~ls~N~l~~l~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~N~l~ 464 (844)
T 3j0a_A 389 SGNKLV-TLPKI---NLTANLIHLSENRLENLDILYFLLRVPHLQILILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQ 464 (844)
T ss_dssp ESCCCC-CCCCC---CTTCCEEECCSCCCCSSTTHHHHTTCTTCCEEEEESCCCCCCCSSSSSCSCTTCCBCEEESCCCS
T ss_pred CCCCcc-ccccc---ccccceeecccCccccCchhhhhhcCCccceeeCCCCcccccccccccccCCccccccCCCCccc
Confidence 999998 44543 4678899999999876432 2356889999999999999876554 4566789999999999997
Q ss_pred -----ccccccccccccCceEeCcCCcccccCcccccCCcccCeeeCCCCcccccCCccccCCCCCCEEECCCCcCcccC
Q 039514 494 -----GTLSFDIGNLKVLLGINLSENNLSGDMPATIGGLKDLQFMDLAYNRLEGPIPESFGDLTSLEVLNLSKNKISGSI 568 (790)
Q Consensus 494 -----~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 568 (790)
+..+..+..+++|+.|+|++|++++..|..|.++++|+.|+|++|++++.+|..+. ++|+.|+|++|++++..
T Consensus 465 ~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~--~~L~~L~Ls~N~l~~~~ 542 (844)
T 3j0a_A 465 LAWETELCWDVFEGLSHLQVLYLNHNYLNSLPPGVFSHLTALRGLSLNSNRLTVLSHNDLP--ANLEILDISRNQLLAPN 542 (844)
T ss_dssp SSCCSCCCSSCSSCBCCEECCCCCHHHHTTCCTTSSSSCCSCSEEEEESCCCSSCCCCCCC--SCCCEEEEEEECCCCCC
T ss_pred cccccccchhhhcCcccccEEECCCCcccccChhHccchhhhheeECCCCCCCccChhhhh--ccccEEECCCCcCCCCC
Confidence 34456688899999999999999999999999999999999999999988877776 89999999999999988
Q ss_pred CccccccCCCCeEeCCCCcceecCCCC
Q 039514 569 PKSMEKLFYLRELNLSFNELEGEIPSG 595 (790)
Q Consensus 569 p~~~~~l~~L~~L~Ls~N~l~~~~p~~ 595 (790)
|..|. +|+.|++++|++.|.++..
T Consensus 543 ~~~~~---~L~~l~l~~Np~~C~c~~~ 566 (844)
T 3j0a_A 543 PDVFV---SLSVLDITHNKFICECELS 566 (844)
T ss_dssp SCCCS---SCCEEEEEEECCCCSSSCC
T ss_pred hhHhC---CcCEEEecCCCcccccccH
Confidence 87764 7889999999999877754
No 9
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=6.3e-56 Score=511.41 Aligned_cols=488 Identities=19% Similarity=0.277 Sum_probs=296.1
Q ss_pred CHHHHHHHHHHHhhcCCCCCccc------cCCCCCCCCCCCc---cccccCCCCCcEEEEECCCCCcceeccccCCCCCC
Q 039514 8 ITTDQQALLALKDHIISDPTNLL------AHNWTSNASVCTW---IGITCDVNSHRVTALDTSQFNLQGTIPSQLGNLSS 78 (790)
Q Consensus 8 ~~~~~~~l~~~~~~~~~~~~~~~------~~~w~~~~~~c~w---~gv~c~~~~~~v~~Ldl~~~~l~~~~~~~~~~l~~ 78 (790)
...|++||.++++++..+.+... ..+|+.+.+||.| .||+|+.. ++|+.|||+++++.|.+|++|+++++
T Consensus 28 ~~~d~~aL~~~~~~~~~~~w~~~~~~~~~~~~W~~~~~~c~w~~~~GV~C~~~-~~V~~L~L~~~~l~g~lp~~l~~L~~ 106 (636)
T 4eco_A 28 YIKDYLALKEIWDALNGKNWSQQGFGTQPGANWNFNKELDMWGAQPGVSLNSN-GRVTGLSLEGFGASGRVPDAIGQLTE 106 (636)
T ss_dssp HHHHHHHHHHHHHHTTGGGCCCCC------CCCCCSSCGGGTTCCTTEEECTT-CCEEEEECTTSCCEEEECGGGGGCTT
T ss_pred HHHHHHHHHHHHHHcCCCCcccCCcCCccCCCCCCCCCcccccCCCCeEEcCC-CCEEEEEecCcccCCcCChHHhcCcc
Confidence 34699999999999853332211 1259988999999 99999875 89999999999999999999999999
Q ss_pred CCEEECCCCCCc------c------cCChhhhCCCCCCEEeCCCCCCcccCCccccCC-------------------CCC
Q 039514 79 LTILNLSHNKLS------G------SVPSSIYTMHTLKFLDFTDNQLSGSVSSFVFNM-------------------SSI 127 (790)
Q Consensus 79 L~~L~Ls~N~i~------~------~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l-------------------~~L 127 (790)
|++|+|++|.+. + ..|... +..|+ +++++|.+.+.++..+..+ ..+
T Consensus 107 L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~--~~~l~-l~l~~~~l~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~l 183 (636)
T 4eco_A 107 LEVLALGSHGEKVNERLFGPKGISANMSDEQ--KQKMR-MHYQKTFVDYDPREDFSDLIKDCINSDPQQKSIKKSSRITL 183 (636)
T ss_dssp CCEEESCCGGGGGTCCSBSTTSBCTTCCHHH--HHHHH-THHHHHHTCCCGGGGSCHHHHHHHHHCTTSCCCCCCCCCCC
T ss_pred ceEEECcCCccccCCccccccccccCchHHH--HHHHH-hhHHHhhhccCchhhHHHHHHHHhhcCccccccccccccch
Confidence 999999999762 2 223222 34455 6666666665555444311 011
Q ss_pred cEEEcc--CccCcccCchhhhccCCCCCEEECCCCcCccc-----------------CCcCCC--CCCCCCeeecccCcc
Q 039514 128 VDIRLT--NNRLSGELPKNICNYLPHLKALFLDKNMFHGK-----------------IPSALS--KCKQLQQLNLQLNNL 186 (790)
Q Consensus 128 ~~L~L~--~N~l~~~lp~~~~~~l~~L~~L~L~~N~i~~~-----------------~p~~~~--~l~~L~~L~L~~N~l 186 (790)
+.+.+. .|+++| +|..+ ..+++|++|+|++|.+++. +|..++ ++++|++|+|++|.+
T Consensus 184 ~~l~l~~~~n~l~~-ip~~l-~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l 261 (636)
T 4eco_A 184 KDTQIGQLSNNITF-VSKAV-MRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPN 261 (636)
T ss_dssp CTTTTTCCSCEEEE-ECGGG-GGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTT
T ss_pred hhhhhccccCCCcc-CCHHH-hcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcC
Confidence 111111 234443 44432 3344444444444444442 444444 444444444444444
Q ss_pred cccCcccccccCCCCceecccccccceEEcccccCccccCccccCCCCCcEEEcccCC-Ccc-cCCcchhc-----CCCC
Q 039514 187 SGAIPKEIGNLTMLKGISLLYNKLQEALVLGMNNLVGVLPATIFNMSTLKVLILINNS-LSG-SLPSRIDL-----SLPT 259 (790)
Q Consensus 187 ~~~~~~~~~~l~~L~~L~l~~n~l~~~l~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~-l~~-~~p~~~~~-----~l~~ 259 (790)
.+.+|..|+++++| ++|++++|. +++ .+|..+.. .+++
T Consensus 262 ~~~~p~~l~~l~~L-----------------------------------~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~ 306 (636)
T 4eco_A 262 LTKLPTFLKALPEM-----------------------------------QLINVACNRGISGEQLKDDWQALADAPVGEK 306 (636)
T ss_dssp CSSCCTTTTTCSSC-----------------------------------CEEECTTCTTSCHHHHHHHHHHHHHSGGGGT
T ss_pred CccChHHHhcCCCC-----------------------------------CEEECcCCCCCccccchHHHHhhhccccCCC
Confidence 44444444444444 444444443 433 33333321 1144
Q ss_pred cceEeecCCcccccCCc--cccCCCCCCEEeccCCcccccCcccccCCCCCccccccCCcccCCCCcccccccCCCCCC-
Q 039514 260 VEVLILALNRFFGTIPS--SITNASKLTVLELGGNTFSGLIPDTIGNLRNLEWLNLSKNSLTSSTSKLSFLSSLANCKK- 336 (790)
Q Consensus 260 L~~L~L~~n~~~~~~p~--~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~l~~l~~- 336 (790)
|+.|++++|.+. .+|. .+.++++|++|++++|.+++.+| .|..+++|++|++++|.++.++ ..+..+++
T Consensus 307 L~~L~L~~n~l~-~ip~~~~l~~l~~L~~L~L~~N~l~g~ip-~~~~l~~L~~L~L~~N~l~~lp------~~l~~l~~~ 378 (636)
T 4eco_A 307 IQIIYIGYNNLK-TFPVETSLQKMKKLGMLECLYNQLEGKLP-AFGSEIKLASLNLAYNQITEIP------ANFCGFTEQ 378 (636)
T ss_dssp CCEEECCSSCCS-SCCCHHHHTTCTTCCEEECCSCCCEEECC-CCEEEEEESEEECCSSEEEECC------TTSEEECTT
T ss_pred CCEEECCCCcCC-ccCchhhhccCCCCCEEeCcCCcCccchh-hhCCCCCCCEEECCCCcccccc------Hhhhhhccc
Confidence 444444444444 3444 44445555555555555544444 4444555555555555544332 22344444
Q ss_pred CCEEEccCCCCcccCCchhhhhc-ccCcEEEeecCcCcccCchhhh-------ccCCcceeeeccccccCcccccccccc
Q 039514 337 LRSLKLAGNPLDGFLPSSIGNLS-KSLETLVIANCSISGNIPQAIS-------NLSNLLTLVLERNKLTGPISITFGRLQ 408 (790)
Q Consensus 337 L~~L~Ls~n~l~~~~p~~~~~l~-~~L~~L~l~~n~l~~~~p~~~~-------~l~~L~~L~L~~N~l~~~~~~~~~~l~ 408 (790)
|++|++++|.++ .+|..+.... ++|++|++++|.+++..|..+. .+++|++|++++|.++..++..+..++
T Consensus 379 L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~~~~~~~L~~L~Ls~N~l~~lp~~~~~~l~ 457 (636)
T 4eco_A 379 VENLSFAHNKLK-YIPNIFDAKSVSVMSAIDFSYNEIGSVDGKNFDPLDPTPFKGINVSSINLSNNQISKFPKELFSTGS 457 (636)
T ss_dssp CCEEECCSSCCS-SCCSCCCTTCSSCEEEEECCSSCTTTTTTCSSCTTCSSCCCCCCEEEEECCSSCCCSCCTHHHHTTC
T ss_pred CcEEEccCCcCc-ccchhhhhcccCccCEEECcCCcCCCcchhhhcccccccccCCCCCEEECcCCccCcCCHHHHccCC
Confidence 555555555554 3444333221 2455666666666555555555 555666666666666654444455566
Q ss_pred ccCeEEeeccccCccCCcc-cc-------ccccccceecccCcccccCCcccc--CCCCCCeeeccCCccccccCccccc
Q 039514 409 KLQGLYLASNNLVGSFPDE-LC-------HIGRLAELALLDNRHSGSIPSCVS--NLTSLRYLYLGSNRFTFVIPSTFWS 478 (790)
Q Consensus 409 ~L~~L~L~~n~l~~~~~~~-~~-------~l~~L~~L~l~~n~~~~~~p~~~~--~l~~L~~L~L~~N~l~~~~~~~~~~ 478 (790)
+|++|++++|.++ .+|.. +. ++++|+.|++++|++. .+|..+. .+++|++|+|++|++++ +|..+..
T Consensus 458 ~L~~L~Ls~N~l~-~i~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~-ip~~~~~ 534 (636)
T 4eco_A 458 PLSSINLMGNMLT-EIPKNSLKDENENFKNTYLLTSIDLRFNKLT-KLSDDFRATTLPYLVGIDLSYNSFSK-FPTQPLN 534 (636)
T ss_dssp CCSEEECCSSCCS-BCCSSSSEETTEECTTGGGCCEEECCSSCCC-BCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGG
T ss_pred CCCEEECCCCCCC-CcCHHHhccccccccccCCccEEECcCCcCC-ccChhhhhccCCCcCEEECCCCCCCC-cChhhhc
Confidence 6666666666666 33332 22 2237777888888777 5777776 88888999999998887 6777888
Q ss_pred CCCCceEeccCCcccccccccccccccCceEeCcCCcccccCcccccCCcccCeeeCCCCcccccCCccccCCCCCCEEE
Q 039514 479 LKDILFFDFSSNFLVGTLSFDIGNLKVLLGINLSENNLSGDMPATIGGLKDLQFMDLAYNRLEGPIPESFGDLTSLEVLN 558 (790)
Q Consensus 479 l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 558 (790)
+++|+.|++++|+ ++++|++.+.+|..+..+++|++|+|++|++ +.+|..+. ++|++|+
T Consensus 535 l~~L~~L~Ls~N~------------------~ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l-~~ip~~~~--~~L~~L~ 593 (636)
T 4eco_A 535 SSTLKGFGIRNQR------------------DAQGNRTLREWPEGITLCPSLTQLQIGSNDI-RKVNEKIT--PNISVLD 593 (636)
T ss_dssp CSSCCEEECCSCB------------------CTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSCCC--TTCCEEE
T ss_pred CCCCCEEECCCCc------------------ccccCcccccChHHHhcCCCCCEEECCCCcC-CccCHhHh--CcCCEEE
Confidence 8888888888875 5678888888899999999999999999999 46777665 7899999
Q ss_pred CCCCcCcccCC
Q 039514 559 LSKNKISGSIP 569 (790)
Q Consensus 559 L~~N~l~~~~p 569 (790)
|++|++....+
T Consensus 594 Ls~N~l~~~~~ 604 (636)
T 4eco_A 594 IKDNPNISIDL 604 (636)
T ss_dssp CCSCTTCEEEC
T ss_pred CcCCCCccccH
Confidence 99998875443
No 10
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=5.3e-54 Score=496.13 Aligned_cols=528 Identities=20% Similarity=0.218 Sum_probs=445.8
Q ss_pred EEECCCCCcceeccccCCCCCCCCEEECCCCCCcccCChhhhCCCCCCEEeCCCCCCcccCCccccCCCCCcEEEccCcc
Q 039514 57 ALDTSQFNLQGTIPSQLGNLSSLTILNLSHNKLSGSVPSSIYTMHTLKFLDFTDNQLSGSVSSFVFNMSSIVDIRLTNNR 136 (790)
Q Consensus 57 ~Ldl~~~~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~ 136 (790)
.+|.++++++ .+|..+. ++|++|+|++|.+++..+.+|..+++|++|+|++|++++..|..|.++++|++|+|++|.
T Consensus 15 ~~~c~~~~l~-~ip~~~~--~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~ 91 (606)
T 3vq2_A 15 TYQCMDQKLS-KVPDDIP--SSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNP 91 (606)
T ss_dssp EEECTTSCCS-SCCTTSC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCC
T ss_pred ceEccCCCcc-cCCCCCC--CCcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCc
Confidence 4677888887 4677665 799999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccCchhhhccCCCCCEEECCCCcCcccCCcCCCCCCCCCeeecccCcccc-cCcccccccCCCCceecccccccceEE
Q 039514 137 LSGELPKNICNYLPHLKALFLDKNMFHGKIPSALSKCKQLQQLNLQLNNLSG-AIPKEIGNLTMLKGISLLYNKLQEALV 215 (790)
Q Consensus 137 l~~~lp~~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~-~~~~~~~~l~~L~~L~l~~n~l~~~l~ 215 (790)
+++..|. .+.++++|++|+|++|.+++..+..|+++++|++|++++|.+++ .+|..|+++++|++|++++|.+
T Consensus 92 l~~~~p~-~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l----- 165 (606)
T 3vq2_A 92 IQSFSPG-SFSGLTSLENLVAVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYI----- 165 (606)
T ss_dssp CCCCCTT-SSTTCTTCCEEECTTSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSSCC-----
T ss_pred ccccChh-hcCCcccCCEEEccCCccccccccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCCcc-----
Confidence 9944454 45889999999999999998888999999999999999999986 5699999999999966665554
Q ss_pred cccccCccccCccccCCCCCc----EEEcccCCCcccCCcchhcCCCCcceEeecCCccc-ccCCccccCCCCCCEEecc
Q 039514 216 LGMNNLVGVLPATIFNMSTLK----VLILINNSLSGSLPSRIDLSLPTVEVLILALNRFF-GTIPSSITNASKLTVLELG 290 (790)
Q Consensus 216 l~~n~l~~~~p~~~~~l~~L~----~L~L~~n~l~~~~p~~~~~~l~~L~~L~L~~n~~~-~~~p~~~~~l~~L~~L~l~ 290 (790)
++..|..+..+.+|+ .|++++|.++ .++...+. ..+|+.|++++|.+. +..|..+.++++|+.+++.
T Consensus 166 ------~~~~~~~~~~l~~L~~~l~~L~l~~n~l~-~~~~~~~~-~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~l~l~ 237 (606)
T 3vq2_A 166 ------QTITVNDLQFLRENPQVNLSLDMSLNPID-FIQDQAFQ-GIKLHELTLRGNFNSSNIMKTCLQNLAGLHVHRLI 237 (606)
T ss_dssp ------CEECTTTTHHHHHCTTCCCEEECTTCCCC-EECTTTTT-TCEEEEEEEESCCSCHHHHHHHHHTTTTCEEEEEE
T ss_pred ------eecChhhhhhhhccccccceeeccCCCcc-eeCccccc-CceeeeeeccCCccchhHHHHHhcccccccccccc
Confidence 455677777666554 8999999998 45555543 348999999999887 4577888999999999886
Q ss_pred CCcccc------cCcccccCCC--CCccccc-cCCcccCCCCcccccccCCCCCCCCEEEccCCCCcccCCchhhhhccc
Q 039514 291 GNTFSG------LIPDTIGNLR--NLEWLNL-SKNSLTSSTSKLSFLSSLANCKKLRSLKLAGNPLDGFLPSSIGNLSKS 361 (790)
Q Consensus 291 ~n~l~~------~~~~~~~~l~--~L~~L~L-s~n~l~~~~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~~ 361 (790)
.+.+.. ..+..+..+. .++.+++ ..|.+.+.. ..+..+++|+.|++++|.+.. +| .+..+ ++
T Consensus 238 ~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~~~~~~~~~~------~~~~~l~~L~~L~l~~~~~~~-l~-~l~~~-~~ 308 (606)
T 3vq2_A 238 LGEFKDERNLEIFEPSIMEGLCDVTIDEFRLTYTNDFSDDI------VKFHCLANVSAMSLAGVSIKY-LE-DVPKH-FK 308 (606)
T ss_dssp EECCTTSCCCSCCCGGGGTTGGGSEEEEEEECCCTTCCGGG------GSCGGGTTCSEEEEESCCCCC-CC-CCCTT-CC
T ss_pred ccccccCCcccccChHHhhhhhhccHhheeccccccccccc------cccccCCCCCEEEecCccchh-hh-hcccc-cc
Confidence 655432 1222232222 2344444 445554432 237788999999999999974 45 55555 68
Q ss_pred CcEEEeecCcCcccCchhhhccCCcceeeeccccccCccccccccccccCeEEeeccccCcc--CCccccccccccceec
Q 039514 362 LETLVIANCSISGNIPQAISNLSNLLTLVLERNKLTGPISITFGRLQKLQGLYLASNNLVGS--FPDELCHIGRLAELAL 439 (790)
Q Consensus 362 L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~--~~~~~~~l~~L~~L~l 439 (790)
|++|++++|.+ +.+| .+ .+++|+.|++++|...+.. .+..+++|++|++++|.+++. .|..+..+++|++|++
T Consensus 309 L~~L~l~~n~l-~~lp-~~-~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~L 383 (606)
T 3vq2_A 309 WQSLSIIRCQL-KQFP-TL-DLPFLKSLTLTMNKGSISF--KKVALPSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDL 383 (606)
T ss_dssp CSEEEEESCCC-SSCC-CC-CCSSCCEEEEESCSSCEEC--CCCCCTTCCEEECCSSCEEEEEECCHHHHCCSCCCEEEC
T ss_pred CCEEEcccccC-cccc-cC-CCCccceeeccCCcCccch--hhccCCCCCEEECcCCccCCCcchhhhhccCCcccEeEC
Confidence 99999999999 5777 45 9999999999999655433 677899999999999999876 4888999999999999
Q ss_pred ccCcccccCCccccCCCCCCeeeccCCccccccC-cccccCCCCceEeccCCcccccccccccccccCceEeCcCCcccc
Q 039514 440 LDNRHSGSIPSCVSNLTSLRYLYLGSNRFTFVIP-STFWSLKDILFFDFSSNFLVGTLSFDIGNLKVLLGINLSENNLSG 518 (790)
Q Consensus 440 ~~n~~~~~~p~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 518 (790)
++|.+.+ +|..+..+++|++|++++|++.+..| ..+..+++|+.|++++|.+++..|..+..+++|++|++++|++++
T Consensus 384 ~~n~l~~-~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 462 (606)
T 3vq2_A 384 SFNGAII-MSANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKD 462 (606)
T ss_dssp CSCSEEE-ECCCCTTCTTCCEEECTTSEEESTTTTTTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGG
T ss_pred CCCcccc-chhhccCCCCCCeeECCCCccCCccChhhhhccccCCEEECcCCCCCccchhhhcCCCCCCEEECCCCcCCC
Confidence 9999875 56889999999999999999999888 789999999999999999999999999999999999999999998
Q ss_pred -cCcccccCCcccCeeeCCCCcccccCCccccCCCCCCEEECCCCcCcccCCccccccCCCCeEeCCCCcceecCCCC-c
Q 039514 519 -DMPATIGGLKDLQFMDLAYNRLEGPIPESFGDLTSLEVLNLSKNKISGSIPKSMEKLFYLRELNLSFNELEGEIPSG-G 596 (790)
Q Consensus 519 -~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~-~ 596 (790)
..|..|+.+++|++|+|++|++++..|..|.++++|++|++++|++++..|..|..+++|++|++++|+++. +|.. .
T Consensus 463 ~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~-~p~~~~ 541 (606)
T 3vq2_A 463 NTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIET-SKGILQ 541 (606)
T ss_dssp GEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCEEGGGTTTCTTCCEEECTTSCCCC-EESCGG
T ss_pred cchHHhhccCCCCCEEECCCCcCCccChhhhcccccCCEEECCCCcCCCcCHHHccCCCcCCEEECCCCcCcc-cCHhHh
Confidence 578999999999999999999999999999999999999999999999999999999999999999999984 5543 3
Q ss_pred ccC-CCCcccccCCcCCCCCCC
Q 039514 597 IFA-NFTAESFMGNELLCGLPN 617 (790)
Q Consensus 597 ~~~-~~~~~~~~~n~~l~~~p~ 617 (790)
.+. ++....+.+|++.|+++.
T Consensus 542 ~l~~~L~~l~l~~N~~~c~c~~ 563 (606)
T 3vq2_A 542 HFPKSLAFFNLTNNSVACICEH 563 (606)
T ss_dssp GSCTTCCEEECCSCCCCCSSTT
T ss_pred hhcccCcEEEccCCCcccCCcc
Confidence 333 477888999999998874
No 11
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=4.9e-54 Score=502.38 Aligned_cols=491 Identities=19% Similarity=0.227 Sum_probs=321.9
Q ss_pred CCCCHHHHHHHHHHHhhcCCCCCccccCCCCCCC-----CC--CCc------------cccccCCCCCcEEEEECCCCCc
Q 039514 5 SSNITTDQQALLALKDHIISDPTNLLAHNWTSNA-----SV--CTW------------IGITCDVNSHRVTALDTSQFNL 65 (790)
Q Consensus 5 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~w~~~~-----~~--c~w------------~gv~c~~~~~~v~~Ldl~~~~l 65 (790)
++...+|++||++||+++ .+| +|+.+. +| |.| .||+|+. .++|+.|||+++++
T Consensus 264 ~~~~~~d~~ALl~~k~~l-~~~------~W~~~~~~~~~~~~~C~W~~~~~~~~w~~~~GV~C~~-~~~V~~L~Ls~~~L 335 (876)
T 4ecn_A 264 TAEYIKDYKALKAIWEAL-DGK------NWRYYSGTINNTIHSLNWNFNKELDMWGDQPGVDLDN-NGRVTGLSLAGFGA 335 (876)
T ss_dssp CCHHHHHHHHHHHHHHHT-TGG------GCCCCCSSCSSCCCCCSCCCSSCGGGTTCCTTEEECT-TSCEEEEECTTTCC
T ss_pred cccchHHHHHHHHHHHHc-CCC------CCCcCCCcccccCCccccccccccccccCcCceEecC-CCCEEEEECccCCC
Confidence 344567999999999998 455 376543 56 999 9999997 48999999999999
Q ss_pred ceeccccCCCCCCCCEEEC-CCCCCcccCChhhh----------------------------------------------
Q 039514 66 QGTIPSQLGNLSSLTILNL-SHNKLSGSVPSSIY---------------------------------------------- 98 (790)
Q Consensus 66 ~~~~~~~~~~l~~L~~L~L-s~N~i~~~~~~~~~---------------------------------------------- 98 (790)
.|.+|++|++|++|++|+| ++|.+.|..|....
T Consensus 336 ~G~ip~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~l~~~~l~~~~~~~ 415 (876)
T 4ecn_A 336 KGRVPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSDLLQDAINRNPEMK 415 (876)
T ss_dssp EEEECGGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHTCTTSC
T ss_pred CCcCchHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhHHHHHHhhhCcccc
Confidence 9999999999999999999 99988765332110
Q ss_pred -----CCCCCCEEeCCC--CCCcccCCccccCCCCCcEEEccCccCcc-----------------cCchhh-hccCCCCC
Q 039514 99 -----TMHTLKFLDFTD--NQLSGSVSSFVFNMSSIVDIRLTNNRLSG-----------------ELPKNI-CNYLPHLK 153 (790)
Q Consensus 99 -----~l~~L~~L~Ls~--n~l~~~~~~~~~~l~~L~~L~L~~N~l~~-----------------~lp~~~-~~~l~~L~ 153 (790)
....++.+.+.. |++++ +|..|.++++|++|+|++|.++| .+|..+ |..+++|+
T Consensus 416 ~i~~~~~l~l~~l~l~~~~N~L~~-IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~ 494 (876)
T 4ecn_A 416 PIKKDSRISLKDTQIGNLTNRITF-ISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLT 494 (876)
T ss_dssp CCCCCCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCC
T ss_pred ccccccccchhhceeccccCcccc-hhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCC
Confidence 111222222322 55655 56666666666666666666665 144444 22455555
Q ss_pred EEECCCCcCcccCCcCCCCCCCCCeeecccCc-ccc-cCcccccccCCCCceecccccccceEEcccccCccccCccccC
Q 039514 154 ALFLDKNMFHGKIPSALSKCKQLQQLNLQLNN-LSG-AIPKEIGNLTMLKGISLLYNKLQEALVLGMNNLVGVLPATIFN 231 (790)
Q Consensus 154 ~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~N~-l~~-~~~~~~~~l~~L~~L~l~~n~l~~~l~l~~n~l~~~~p~~~~~ 231 (790)
+|+|++|.+.+.+|..|+++++|++|+|++|+ +++ .+|..++.++ ..+..
T Consensus 495 ~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~----------------------------~~~~~ 546 (876)
T 4ecn_A 495 DVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLA----------------------------DDEDT 546 (876)
T ss_dssp EEEEESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHH----------------------------HCTTT
T ss_pred EEECcCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhh----------------------------hcccc
Confidence 55555555555555555555555555555554 444 4444444333 01112
Q ss_pred CCCCcEEEcccCCCcccCCc-chhcCCCCcceEeecCCcccccCCccccCCCCCCEEeccCCcccccCcccccCCCC-Cc
Q 039514 232 MSTLKVLILINNSLSGSLPS-RIDLSLPTVEVLILALNRFFGTIPSSITNASKLTVLELGGNTFSGLIPDTIGNLRN-LE 309 (790)
Q Consensus 232 l~~L~~L~L~~n~l~~~~p~-~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~-L~ 309 (790)
+++|+.|++++|.++ .+|. .....+++|+.|++++|.+. .+| .+..+++|+.|++++|.++ .+|..+..+++ |+
T Consensus 547 l~~L~~L~Ls~N~L~-~ip~~~~l~~L~~L~~L~Ls~N~l~-~lp-~~~~L~~L~~L~Ls~N~l~-~lp~~l~~l~~~L~ 622 (876)
T 4ecn_A 547 GPKIQIFYMGYNNLE-EFPASASLQKMVKLGLLDCVHNKVR-HLE-AFGTNVKLTDLKLDYNQIE-EIPEDFCAFTDQVE 622 (876)
T ss_dssp TTTCCEEECCSSCCC-BCCCHHHHTTCTTCCEEECTTSCCC-BCC-CCCTTSEESEEECCSSCCS-CCCTTSCEECTTCC
T ss_pred cCCccEEEeeCCcCC-ccCChhhhhcCCCCCEEECCCCCcc-cch-hhcCCCcceEEECcCCccc-cchHHHhhccccCC
Confidence 235556666666555 5554 12224556666666666555 555 5666666666666666666 45555666666 77
Q ss_pred cccccCCcccCCCCcccccccCCCC--CCCCEEEccCCCCcccCCchh---hhh-cccCcEEEeecCcCcccCchhhhcc
Q 039514 310 WLNLSKNSLTSSTSKLSFLSSLANC--KKLRSLKLAGNPLDGFLPSSI---GNL-SKSLETLVIANCSISGNIPQAISNL 383 (790)
Q Consensus 310 ~L~Ls~n~l~~~~~~~~~~~~l~~l--~~L~~L~Ls~n~l~~~~p~~~---~~l-~~~L~~L~l~~n~l~~~~p~~~~~l 383 (790)
.|+|++|.++.++. .+..+ ++|+.|++++|.+.+.+|... ..+ ..+|+.|++++|.++...+..+..+
T Consensus 623 ~L~Ls~N~L~~lp~------~~~~~~~~~L~~L~Ls~N~l~g~ip~l~~~l~~~~~~~L~~L~Ls~N~L~~lp~~~~~~l 696 (876)
T 4ecn_A 623 GLGFSHNKLKYIPN------IFNAKSVYVMGSVDFSYNKIGSEGRNISCSMDDYKGINASTVTLSYNEIQKFPTELFATG 696 (876)
T ss_dssp EEECCSSCCCSCCS------CCCTTCSSCEEEEECCSSCTTTTSSSCSSCTTTCCCCCEEEEECCSSCCCSCCHHHHHTT
T ss_pred EEECcCCCCCcCch------hhhccccCCCCEEECcCCcCCCccccchhhhccccCCCcCEEEccCCcCCccCHHHHccC
Confidence 77777776665442 22232 337777777777766544221 111 1368888888888874333344578
Q ss_pred CCcceeeeccccccCcccccccc-------ccccCeEEeeccccCccCCcccc--ccccccceecccCcccccCCccccC
Q 039514 384 SNLLTLVLERNKLTGPISITFGR-------LQKLQGLYLASNNLVGSFPDELC--HIGRLAELALLDNRHSGSIPSCVSN 454 (790)
Q Consensus 384 ~~L~~L~L~~N~l~~~~~~~~~~-------l~~L~~L~L~~n~l~~~~~~~~~--~l~~L~~L~l~~n~~~~~~p~~~~~ 454 (790)
++|+.|+|++|+++..+...+.. +++|+.|+|++|+++ .+|..+. .+++|+.|++++|++.+ +|..+..
T Consensus 697 ~~L~~L~Ls~N~L~~ip~~~~~~~~~~l~nl~~L~~L~Ls~N~L~-~lp~~l~~~~l~~L~~L~Ls~N~L~~-lp~~l~~ 774 (876)
T 4ecn_A 697 SPISTIILSNNLMTSIPENSLKPKDGNYKNTYLLTTIDLRFNKLT-SLSDDFRATTLPYLSNMDVSYNCFSS-FPTQPLN 774 (876)
T ss_dssp CCCSEEECCSCCCSCCCTTSSSCTTSCCTTGGGCCEEECCSSCCC-CCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGG
T ss_pred CCCCEEECCCCcCCccChHHhccccccccccCCccEEECCCCCCc-cchHHhhhccCCCcCEEEeCCCCCCc-cchhhhc
Confidence 88888888888888555444432 348999999999988 6777776 88889999999988887 6888888
Q ss_pred CCCCCeeeccCCccccccCcccccCCCCceEeccCCcccccccccccccccCceEeCcCCcccccCcccccCCcccCeee
Q 039514 455 LTSLRYLYLGSNRFTFVIPSTFWSLKDILFFDFSSNFLVGTLSFDIGNLKVLLGINLSENNLSGDMPATIGGLKDLQFMD 534 (790)
Q Consensus 455 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 534 (790)
+++|+.|+|++|+ ++++|++.+.+|..+..+++|+.|+|++|++ +.+|..+. ++|+.|+
T Consensus 775 L~~L~~L~Ls~N~------------------~ls~N~l~~~ip~~l~~L~~L~~L~Ls~N~L-~~Ip~~l~--~~L~~Ld 833 (876)
T 4ecn_A 775 SSQLKAFGIRHQR------------------DAEGNRILRQWPTGITTCPSLIQLQIGSNDI-RKVDEKLT--PQLYILD 833 (876)
T ss_dssp CTTCCEEECCCCB------------------CTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSCCC--SSSCEEE
T ss_pred CCCCCEEECCCCC------------------CcccccccccChHHHhcCCCCCEEECCCCCC-CccCHhhc--CCCCEEE
Confidence 8999999998875 5566777777777777788888888888888 46666554 5788888
Q ss_pred CCCCcccccCCccccCCCCCCEEECCCCcCc
Q 039514 535 LAYNRLEGPIPESFGDLTSLEVLNLSKNKIS 565 (790)
Q Consensus 535 Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 565 (790)
|++|++....+..+.....+..+.|.+|.+.
T Consensus 834 Ls~N~l~~i~~~~~~~~~~~~~~~L~~n~~~ 864 (876)
T 4ecn_A 834 IADNPNISIDVTSVCPYIEAGMYVLLYDKTQ 864 (876)
T ss_dssp CCSCTTCEEECGGGHHHHHTTCCEEECCTTS
T ss_pred CCCCCCCccChHHccccccchheeecCCCcc
Confidence 8888877666666655555556666666554
No 12
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=7.9e-53 Score=502.22 Aligned_cols=526 Identities=21% Similarity=0.211 Sum_probs=443.7
Q ss_pred EEECCCCCcceeccccCCCCCCCCEEECCCCCCcccCChhhhCCCCCCEEeCCCCCCccc-CCccccCCCCCcEEEccCc
Q 039514 57 ALDTSQFNLQGTIPSQLGNLSSLTILNLSHNKLSGSVPSSIYTMHTLKFLDFTDNQLSGS-VSSFVFNMSSIVDIRLTNN 135 (790)
Q Consensus 57 ~Ldl~~~~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~-~~~~~~~l~~L~~L~L~~N 135 (790)
..|.+++++++ +|. -.++|++|||++|.|+++.|..|..+++|++|||++|...+. .|..|.++++|++|+|++|
T Consensus 8 ~~dcs~~~L~~-vP~---lp~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N 83 (844)
T 3j0a_A 8 IAFYRFCNLTQ-VPQ---VLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSS 83 (844)
T ss_dssp EEEESCCCSSC-CCS---SCTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTC
T ss_pred EEEccCCCCCC-CCC---CCCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCC
Confidence 45778888875 455 347999999999999999999999999999999999965544 4889999999999999999
Q ss_pred cCcccCchhhhccCCCCCEEECCCCcCcccCCcC--CCCCCCCCeeecccCcccccCc-ccccccCCCCceecccccccc
Q 039514 136 RLSGELPKNICNYLPHLKALFLDKNMFHGKIPSA--LSKCKQLQQLNLQLNNLSGAIP-KEIGNLTMLKGISLLYNKLQE 212 (790)
Q Consensus 136 ~l~~~lp~~~~~~l~~L~~L~L~~N~i~~~~p~~--~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~l~~n~l~~ 212 (790)
.+++..|. .|.++++|++|+|++|.+++..|.. |+++++|++|+|++|.+++..+ ..|+++++|++|++++|.
T Consensus 84 ~l~~~~p~-~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~--- 159 (844)
T 3j0a_A 84 KIYFLHPD-AFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQ--- 159 (844)
T ss_dssp CCCEECTT-SSCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSC---
T ss_pred cCcccCHh-HccCCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCc---
Confidence 99954454 4588999999999999999866655 9999999999999999987765 579999999996665554
Q ss_pred eEEcccccCccccCccccCC--CCCcEEEcccCCCcccCCcchhc-----CCCCcceEeecCCcccccCCccccCC---C
Q 039514 213 ALVLGMNNLVGVLPATIFNM--STLKVLILINNSLSGSLPSRIDL-----SLPTVEVLILALNRFFGTIPSSITNA---S 282 (790)
Q Consensus 213 ~l~l~~n~l~~~~p~~~~~l--~~L~~L~L~~n~l~~~~p~~~~~-----~l~~L~~L~L~~n~~~~~~p~~~~~l---~ 282 (790)
+.+..|..+..+ ++|+.|++++|.+.+..|..+.. ....|+.|+++.|.+.+..+..+... .
T Consensus 160 --------i~~~~~~~l~~l~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~ 231 (844)
T 3j0a_A 160 --------IFLVCEHELEPLQGKTLSFFSLAANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKS 231 (844)
T ss_dssp --------CCCCCSGGGHHHHHCSSCCCEECCSBSCCCCCCCCCSSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSC
T ss_pred --------CCeeCHHHcccccCCccceEECCCCccccccccchhhcCCccccCceeEEecCCCcCchhHHHHHHhhcCcc
Confidence 455677788777 89999999999999877765431 11249999999999988888776543 5
Q ss_pred CCCEEeccC---------CcccccCcccccCC--CCCccccccCCcccCCCCcccccccCCCCCCCCEEEccCCCCcccC
Q 039514 283 KLTVLELGG---------NTFSGLIPDTIGNL--RNLEWLNLSKNSLTSSTSKLSFLSSLANCKKLRSLKLAGNPLDGFL 351 (790)
Q Consensus 283 ~L~~L~l~~---------n~l~~~~~~~~~~l--~~L~~L~Ls~n~l~~~~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~ 351 (790)
+++.|.++. +.+.+..+..|..+ ++|+.|++++|.+....+ ..+..+++|+.|+|++|.+.+..
T Consensus 232 ~l~~L~l~~~~~~~~~~~~~l~~~~~~~f~~l~~~~L~~L~Ls~n~l~~~~~-----~~~~~l~~L~~L~L~~n~i~~~~ 306 (844)
T 3j0a_A 232 QAFSLILAHHIMGAGFGFHNIKDPDQNTFAGLARSSVRHLDLSHGFVFSLNS-----RVFETLKDLKVLNLAYNKINKIA 306 (844)
T ss_dssp CBSEEECCSSCCBCSSSCSSSTTGGGTTTTTTTTSCCCEEECTTCCCCEECS-----CCSSSCCCCCEEEEESCCCCEEC
T ss_pred cccceecccccccccccccccCCCChhhhhccccCCccEEECCCCcccccCh-----hhhhcCCCCCEEECCCCcCCCCC
Confidence 788888773 33444445556655 689999999999987643 45788999999999999999988
Q ss_pred CchhhhhcccCcEEEeecCcCcccCchhhhccCCcceeeeccccccCccccccccccccCeEEeeccccCccCCcccccc
Q 039514 352 PSSIGNLSKSLETLVIANCSISGNIPQAISNLSNLLTLVLERNKLTGPISITFGRLQKLQGLYLASNNLVGSFPDELCHI 431 (790)
Q Consensus 352 p~~~~~l~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l 431 (790)
|..+..+ ++|++|++++|.+++..|..|..+++|+.|++++|.+.+..+..|..+++|+.|++++|.+++. ..+
T Consensus 307 ~~~~~~l-~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~i-----~~~ 380 (844)
T 3j0a_A 307 DEAFYGL-DNLQVLNLSYNLLGELYSSNFYGLPKVAYIDLQKNHIAIIQDQTFKFLEKLQTLDLRDNALTTI-----HFI 380 (844)
T ss_dssp TTTTTTC-SSCCEEEEESCCCSCCCSCSCSSCTTCCEEECCSCCCCCCCSSCSCSCCCCCEEEEETCCSCCC-----SSC
T ss_pred hHHhcCC-CCCCEEECCCCCCCccCHHHhcCCCCCCEEECCCCCCCccChhhhcCCCCCCEEECCCCCCCcc-----cCC
Confidence 8888877 6899999999999988899999999999999999999998888999999999999999999843 237
Q ss_pred ccccceecccCcccccCCccccCCCCCCeeeccCCccccccC-cccccCCCCceEeccCCcccccccc-cccccccCceE
Q 039514 432 GRLAELALLDNRHSGSIPSCVSNLTSLRYLYLGSNRFTFVIP-STFWSLKDILFFDFSSNFLVGTLSF-DIGNLKVLLGI 509 (790)
Q Consensus 432 ~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~ls~N~l~~~~~~-~~~~l~~L~~L 509 (790)
++|+.|++++|++. .+|.. ..+++.|++++|++++... ..+..+++|+.|++++|++++..+. .+..+++|+.|
T Consensus 381 ~~L~~L~l~~N~l~-~l~~~---~~~l~~L~ls~N~l~~l~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L 456 (844)
T 3j0a_A 381 PSIPDIFLSGNKLV-TLPKI---NLTANLIHLSENRLENLDILYFLLRVPHLQILILNQNRFSSCSGDQTPSENPSLEQL 456 (844)
T ss_dssp CSCSEEEEESCCCC-CCCCC---CTTCCEEECCSCCCCSSTTHHHHTTCTTCCEEEEESCCCCCCCSSSSSCSCTTCCBC
T ss_pred CCcchhccCCCCcc-ccccc---ccccceeecccCccccCchhhhhhcCCccceeeCCCCcccccccccccccCCccccc
Confidence 88999999999998 44543 5689999999999987533 3355889999999999999876543 45678999999
Q ss_pred eCcCCccc-----ccCcccccCCcccCeeeCCCCcccccCCccccCCCCCCEEECCCCcCcccCCccccccCCCCeEeCC
Q 039514 510 NLSENNLS-----GDMPATIGGLKDLQFMDLAYNRLEGPIPESFGDLTSLEVLNLSKNKISGSIPKSMEKLFYLRELNLS 584 (790)
Q Consensus 510 ~Ls~N~l~-----~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls 584 (790)
+|++|.++ +..+..|.++++|+.|+|++|++++.+|..|.++++|+.|+|++|++++..|..+. ++|+.|+|+
T Consensus 457 ~Ls~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~--~~L~~L~Ls 534 (844)
T 3j0a_A 457 FLGENMLQLAWETELCWDVFEGLSHLQVLYLNHNYLNSLPPGVFSHLTALRGLSLNSNRLTVLSHNDLP--ANLEILDIS 534 (844)
T ss_dssp EEESCCCSSSCCSCCCSSCSSCBCCEECCCCCHHHHTTCCTTSSSSCCSCSEEEEESCCCSSCCCCCCC--SCCCEEEEE
T ss_pred cCCCCccccccccccchhhhcCcccccEEECCCCcccccChhHccchhhhheeECCCCCCCccChhhhh--ccccEEECC
Confidence 99999997 45567789999999999999999999999999999999999999999987777776 899999999
Q ss_pred CCcceecCCCCcccCCCCcccccCCcCCCCCCC
Q 039514 585 FNELEGEIPSGGIFANFTAESFMGNELLCGLPN 617 (790)
Q Consensus 585 ~N~l~~~~p~~~~~~~~~~~~~~~n~~l~~~p~ 617 (790)
+|++++.+|.. +..+....+.+|++.|+|+.
T Consensus 535 ~N~l~~~~~~~--~~~L~~l~l~~Np~~C~c~~ 565 (844)
T 3j0a_A 535 RNQLLAPNPDV--FVSLSVLDITHNKFICECEL 565 (844)
T ss_dssp EECCCCCCSCC--CSSCCEEEEEEECCCCSSSC
T ss_pred CCcCCCCChhH--hCCcCEEEecCCCccccccc
Confidence 99999988854 66788888999999998763
No 13
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.5e-50 Score=464.11 Aligned_cols=499 Identities=21% Similarity=0.234 Sum_probs=342.5
Q ss_pred CcEEEEECCCCCcceeccccCCCCCCCCEEECCCCCCcccCChhhhCCCCCCEEeCCCCCCcccCCccccCCCCCcEEEc
Q 039514 53 HRVTALDTSQFNLQGTIPSQLGNLSSLTILNLSHNKLSGSVPSSIYTMHTLKFLDFTDNQLSGSVSSFVFNMSSIVDIRL 132 (790)
Q Consensus 53 ~~v~~Ldl~~~~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 132 (790)
.+++.||+++|.+++..+.+|..+++|++|+|++|.++++.+.+|..+++|++|+|++|++++..+..|.++++|++|++
T Consensus 28 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 107 (570)
T 2z63_A 28 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 107 (570)
T ss_dssp SSCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEEC
T ss_pred ccccEEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHhhhcCccccccccc
Confidence 45777888888888777777888888888888888888777777888888888888888888777778888888888888
Q ss_pred cCccCcccCchhhhccCCCCCEEECCCCcCcc-cCCcCCCCCCCCCeeecccCcccccCcccccccCCCCceeccccccc
Q 039514 133 TNNRLSGELPKNICNYLPHLKALFLDKNMFHG-KIPSALSKCKQLQQLNLQLNNLSGAIPKEIGNLTMLKGISLLYNKLQ 211 (790)
Q Consensus 133 ~~N~l~~~lp~~~~~~l~~L~~L~L~~N~i~~-~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~ 211 (790)
++|.++ .+|...+..+++|++|++++|.+++ .+|..|+++++|++|++++|++++..+..++.+++|+.+.
T Consensus 108 ~~n~l~-~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~~~------- 179 (570)
T 2z63_A 108 VETNLA-SLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLN------- 179 (570)
T ss_dssp TTSCCC-CSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEECGGGGHHHHTCTTCC-------
T ss_pred cccccc-cCCCccccccccccEEecCCCccceecChhhhcccCCCCEEeCcCCccceecHHHccchhccchhh-------
Confidence 888877 5665445777888888888888776 3577788888888888888888777777777777772211
Q ss_pred ceEEcccccCccccCccccCCCCCcEEEcccCCCcccCCcchhcCCCCcceEeecCCccc------ccCCccccCCC--C
Q 039514 212 EALVLGMNNLVGVLPATIFNMSTLKVLILINNSLSGSLPSRIDLSLPTVEVLILALNRFF------GTIPSSITNAS--K 283 (790)
Q Consensus 212 ~~l~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~~l~~L~~L~L~~n~~~------~~~p~~~~~l~--~ 283 (790)
..++++.|.+.+..|..+..+ +|+.|++++|......-......++.++...+....+. ......+..+. .
T Consensus 180 ~~L~l~~n~l~~~~~~~~~~~-~L~~L~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~l~~l~ 258 (570)
T 2z63_A 180 LSLDLSLNPMNFIQPGAFKEI-RLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLT 258 (570)
T ss_dssp CEEECTTCCCCEECTTTTTTC-EEEEEEEESCCSCTTHHHHHHHTTTTCEEEEEEEEECCCCSSCEECCTTTTGGGGGSE
T ss_pred hhcccCCCCceecCHHHhccC-cceeEecccccccccchhhhhcCccccceeeeccccccCchhhhhcchhhhccccccc
Confidence 114455555555666666554 67888887775432211122224455554444322211 11111111111 1
Q ss_pred CCEEeccCC-cccccCcccccCCCCCccccccCCcccCCCCcccccccCCCCCCCCEEEccCCCCcccCCchhhhhcccC
Q 039514 284 LTVLELGGN-TFSGLIPDTIGNLRNLEWLNLSKNSLTSSTSKLSFLSSLANCKKLRSLKLAGNPLDGFLPSSIGNLSKSL 362 (790)
Q Consensus 284 L~~L~l~~n-~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~~L 362 (790)
++.++++++ .+.+..|..|..+++|+.|++++|.++. +|..+... +|
T Consensus 259 l~~l~l~~~~~~~~~~~~~~~~l~~L~~L~l~~~~l~~------------------------------l~~~~~~~--~L 306 (570)
T 2z63_A 259 IEEFRLAYLDYYLDDIIDLFNCLTNVSSFSLVSVTIER------------------------------VKDFSYNF--GW 306 (570)
T ss_dssp EEEEEEEETTEEESCSTTTTGGGTTCSEEEEESCEECS------------------------------CCBCCSCC--CC
T ss_pred hhhhhhhcchhhhhhchhhhcCcCcccEEEecCccchh------------------------------hhhhhccC--Cc
Confidence 233444444 4444444445555555555555554443 33333332 45
Q ss_pred cEEEeecCcCcccCchhhhccCCcceeeeccccccCccccccccccccCeEEeeccccCccC--Cccccccccccceecc
Q 039514 363 ETLVIANCSISGNIPQAISNLSNLLTLVLERNKLTGPISITFGRLQKLQGLYLASNNLVGSF--PDELCHIGRLAELALL 440 (790)
Q Consensus 363 ~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~--~~~~~~l~~L~~L~l~ 440 (790)
++|++++|.+. .+|. ..+++|+.|++++|.+.+..+. ..+++|++|++++|.+.+.. +..+..+++|+.|+++
T Consensus 307 ~~L~l~~n~~~-~l~~--~~l~~L~~L~l~~n~~~~~~~~--~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~ 381 (570)
T 2z63_A 307 QHLELVNCKFG-QFPT--LKLKSLKRLTFTSNKGGNAFSE--VDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLS 381 (570)
T ss_dssp SEEEEESCBCS-SCCB--CBCSSCCEEEEESCBSCCBCCC--CBCTTCCEEECCSSCCBEEEEEEHHHHTCSCCCEEECC
T ss_pred cEEeeccCccc-ccCc--ccccccCEEeCcCCcccccccc--ccCCCCCEEeCcCCccCccccccccccccCccCEEECC
Confidence 55555555554 2332 2455555555555555443332 45566666666666665433 4555666667777777
Q ss_pred cCcccccCCccccCCCCCCeeeccCCccccccC-cccccCCCCceEeccCCcccccccccccccccCceEeCcCCccc-c
Q 039514 441 DNRHSGSIPSCVSNLTSLRYLYLGSNRFTFVIP-STFWSLKDILFFDFSSNFLVGTLSFDIGNLKVLLGINLSENNLS-G 518 (790)
Q Consensus 441 ~n~~~~~~p~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~ 518 (790)
+|.+.+..+. +..+++|++|++++|.+.+..| ..+..+++|++|++++|.+.+..+..+..+++|++|++++|.+. +
T Consensus 382 ~n~l~~~~~~-~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~ 460 (570)
T 2z63_A 382 FNGVITMSSN-FLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQEN 460 (570)
T ss_dssp SCSEEEEEEE-EETCTTCCEEECTTSEEESCTTSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGG
T ss_pred CCcccccccc-ccccCCCCEEEccCCccccccchhhhhcCCCCCEEeCcCCcccccchhhhhcCCcCcEEECcCCcCccc
Confidence 7766654333 7778888888888888877665 56778888888888888888888888889999999999999997 5
Q ss_pred cCcccccCCcccCeeeCCCCcccccCCccccCCCCCCEEECCCCcCcccCCccccccCCCCeEeCCCCcceecCCCCccc
Q 039514 519 DMPATIGGLKDLQFMDLAYNRLEGPIPESFGDLTSLEVLNLSKNKISGSIPKSMEKLFYLRELNLSFNELEGEIPSGGIF 598 (790)
Q Consensus 519 ~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 598 (790)
.+|..|..+++|++|++++|++++..|..|..+++|++|++++|++++..|..|..+++|+.|++++|+++|.+|.....
T Consensus 461 ~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~~~~~ 540 (570)
T 2z63_A 461 FLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRIDYL 540 (570)
T ss_dssp EECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTTTHHH
T ss_pred cchhhhhcccCCCEEECCCCccccCChhhhhcccCCCEEeCCCCcCCCCCHHHhhcccCCcEEEecCCcccCCCcchHHH
Confidence 78899999999999999999999988999999999999999999999888888999999999999999999998876433
No 14
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00 E-value=1.1e-49 Score=454.68 Aligned_cols=494 Identities=20% Similarity=0.234 Sum_probs=364.5
Q ss_pred CCCccccccCCCCCcEEEEECCCCCcceeccccCCCCCCCCEEECCCCCCcccCChhhhCCCCCCEEeCCCCCCcccCCc
Q 039514 40 VCTWIGITCDVNSHRVTALDTSQFNLQGTIPSQLGNLSSLTILNLSHNKLSGSVPSSIYTMHTLKFLDFTDNQLSGSVSS 119 (790)
Q Consensus 40 ~c~w~gv~c~~~~~~v~~Ldl~~~~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~ 119 (790)
.|.|.|+ ||.. +++++ .+|+.+. ++|++|+|++|++++..|.+|..+++|++|+|++|++++..|.
T Consensus 3 ~C~~~~~-c~~~----------~~~l~-~ip~~~~--~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~ 68 (549)
T 2z81_A 3 SCDASGV-CDGR----------SRSFT-SIPSGLT--AAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGD 68 (549)
T ss_dssp EECTTSE-EECT----------TSCCS-SCCSCCC--TTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTT
T ss_pred cCCCCce-EECC----------CCccc-cccccCC--CCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChh
Confidence 5999998 8653 34554 4566665 6899999999999999899999999999999999999999999
Q ss_pred cccCCCCCcEEEccCccCcccCchhhhccCCCCCEEECCCCcCcc-cCCcCCCCCCCCCeeecccCc-ccccCccccccc
Q 039514 120 FVFNMSSIVDIRLTNNRLSGELPKNICNYLPHLKALFLDKNMFHG-KIPSALSKCKQLQQLNLQLNN-LSGAIPKEIGNL 197 (790)
Q Consensus 120 ~~~~l~~L~~L~L~~N~l~~~lp~~~~~~l~~L~~L~L~~N~i~~-~~p~~~~~l~~L~~L~L~~N~-l~~~~~~~~~~l 197 (790)
.|.++++|++|+|++|+++ .+|...+..+++|++|+|++|.+++ ..|..|+++++|++|++++|. +....+..|+++
T Consensus 69 ~~~~l~~L~~L~Ls~n~l~-~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l 147 (549)
T 2z81_A 69 AFYSLGSLEHLDLSDNHLS-SLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGL 147 (549)
T ss_dssp TTTTCTTCCEEECTTSCCC-SCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTC
T ss_pred hccccccCCEEECCCCccC-ccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcc
Confidence 9999999999999999999 5666666889999999999999987 357789999999999999998 454445789999
Q ss_pred CCCCceecccccccceEEcccccCccccCccccCCCCCcEEEcccCCCcccCCcchhcCCCCcceEeecCCcccccC--C
Q 039514 198 TMLKGISLLYNKLQEALVLGMNNLVGVLPATIFNMSTLKVLILINNSLSGSLPSRIDLSLPTVEVLILALNRFFGTI--P 275 (790)
Q Consensus 198 ~~L~~L~l~~n~l~~~l~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~~l~~L~~L~L~~n~~~~~~--p 275 (790)
++|++|++++ |.+.+..|..+.++++|++|++++|.+. .+|......+++|+.|++++|.+.+.. |
T Consensus 148 ~~L~~L~L~~-----------n~l~~~~~~~l~~l~~L~~L~l~~n~~~-~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~ 215 (549)
T 2z81_A 148 TSLNELEIKA-----------LSLRNYQSQSLKSIRDIHHLTLHLSESA-FLLEIFADILSSVRYLELRDTNLARFQFSP 215 (549)
T ss_dssp CEEEEEEEEE-----------TTCCEECTTTTTTCSEEEEEEEECSBST-THHHHHHHSTTTBSEEEEESCBCTTCCCCC
T ss_pred cccCeeeccC-----------CcccccChhhhhccccCceEecccCccc-ccchhhHhhcccccEEEccCCccccccccc
Confidence 9998865554 5555678899999999999999999886 566666557899999999999988752 2
Q ss_pred -ccccCCCCCCEEeccCCcccccCcc----cccCCCCCccccccCCcccCCCCcc-cccccCCCCCCCCEEEccCCCCcc
Q 039514 276 -SSITNASKLTVLELGGNTFSGLIPD----TIGNLRNLEWLNLSKNSLTSSTSKL-SFLSSLANCKKLRSLKLAGNPLDG 349 (790)
Q Consensus 276 -~~~~~l~~L~~L~l~~n~l~~~~~~----~~~~l~~L~~L~Ls~n~l~~~~~~~-~~~~~l~~l~~L~~L~Ls~n~l~~ 349 (790)
.....+++|+.|++++|.+++..+. .+..+++|+.+++++|.+.+..... .....+..+++|+.|++.++.+..
T Consensus 216 ~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~~~~~~~~L~~l~l~~~~~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~i~~ 295 (549)
T 2z81_A 216 LPVDEVSSPMKKLAFRGSVLTDESFNELLKLLRYILELSEVEFDDCTLNGLGDFNPSESDVVSELGKVETVTIRRLHIPQ 295 (549)
T ss_dssp CSSCCCCCCCCEEEEESCEEEHHHHHHHHGGGGGCTTCCEEEEESCEEECCSCCCCCTTTCCCCCTTCCEEEEESCBCSC
T ss_pred cchhhhhhcccceeccccccchhHHHHHHHHhhhhccccccccccccccccccccccchhhhhhhcccccccccccccch
Confidence 2234578999999999998865443 3466789999999999887653210 011235667788888888887653
Q ss_pred c-----CCchhhhhcccCcEEEeecCcCcccCchhh-hccCCcceeeeccccccCccc---cccccccccCeEEeecccc
Q 039514 350 F-----LPSSIGNLSKSLETLVIANCSISGNIPQAI-SNLSNLLTLVLERNKLTGPIS---ITFGRLQKLQGLYLASNNL 420 (790)
Q Consensus 350 ~-----~p~~~~~l~~~L~~L~l~~n~l~~~~p~~~-~~l~~L~~L~L~~N~l~~~~~---~~~~~l~~L~~L~L~~n~l 420 (790)
. ++. +.....+|+.|++++|.+. .+|..+ ..+++|++|++++|++.+..+ ..++.+++|++|++++|++
T Consensus 296 ~~~~~~l~~-~~~~~~~L~~L~l~~n~l~-~ip~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l 373 (549)
T 2z81_A 296 FYLFYDLST-VYSLLEKVKRITVENSKVF-LVPCSFSQHLKSLEFLDLSENLMVEEYLKNSACKGAWPSLQTLVLSQNHL 373 (549)
T ss_dssp GGGSCCCCH-HHHHSTTCCEEEEESSCCC-CCCHHHHHHCTTCCEEECCSSCCCHHHHHHHTCTTSSTTCCEEECTTSCC
T ss_pred hhhcccchh-hhhhcccceEEEeccCccc-cCCHHHHhcCccccEEEccCCccccccccchhhhhccccCcEEEccCCcc
Confidence 2 111 1222346777777777776 445444 467777777777777766442 2355666777777777766
Q ss_pred CccCCccccccccccceecccCcccccCCccccCCCCCCeeeccCCccccccCcccccCCCCceEeccCCcccccccccc
Q 039514 421 VGSFPDELCHIGRLAELALLDNRHSGSIPSCVSNLTSLRYLYLGSNRFTFVIPSTFWSLKDILFFDFSSNFLVGTLSFDI 500 (790)
Q Consensus 421 ~~~~~~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~ 500 (790)
++..+. +..+..+++|++|++++|+++ .+|..+..+++|++|++++|.+++.... +
T Consensus 374 ~~~~~~----------------------~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~~L~~L~Ls~N~l~~l~~~-~ 429 (549)
T 2z81_A 374 RSMQKT----------------------GEILLTLKNLTSLDISRNTFH-PMPDSCQWPEKMRFLNLSSTGIRVVKTC-I 429 (549)
T ss_dssp CCHHHH----------------------HHHGGGCTTCCEEECTTCCCC-CCCSCCCCCTTCCEEECTTSCCSCCCTT-S
T ss_pred cccccc----------------------hhhhhcCCCCCEEECCCCCCc-cCChhhcccccccEEECCCCCcccccch-h
Confidence 543210 022344455555555555554 2344444555555555555555432221 1
Q ss_pred cccccCceEeCcCCcccccCcccccCCcccCeeeCCCCcccccCCccccCCCCCCEEECCCCcCcccCCccccccCCCCe
Q 039514 501 GNLKVLLGINLSENNLSGDMPATIGGLKDLQFMDLAYNRLEGPIPESFGDLTSLEVLNLSKNKISGSIPKSMEKLFYLRE 580 (790)
Q Consensus 501 ~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 580 (790)
.+.|++|++++|++++.. ..+++|++|+|++|+++ .+|. ...+++|++|+|++|++++..|..+..+++|+.
T Consensus 430 --~~~L~~L~Ls~N~l~~~~----~~l~~L~~L~Ls~N~l~-~ip~-~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 501 (549)
T 2z81_A 430 --PQTLEVLDVSNNNLDSFS----LFLPRLQELYISRNKLK-TLPD-ASLFPVLLVMKISRNQLKSVPDGIFDRLTSLQK 501 (549)
T ss_dssp --CTTCSEEECCSSCCSCCC----CCCTTCCEEECCSSCCS-SCCC-GGGCTTCCEEECCSSCCCCCCTTGGGGCTTCCE
T ss_pred --cCCceEEECCCCChhhhc----ccCChhcEEECCCCccC-cCCC-cccCccCCEEecCCCccCCcCHHHHhcCcccCE
Confidence 246788888888887643 46889999999999998 4555 467899999999999999888888999999999
Q ss_pred EeCCCCcceecCCC
Q 039514 581 LNLSFNELEGEIPS 594 (790)
Q Consensus 581 L~Ls~N~l~~~~p~ 594 (790)
|++++|++.|.+|.
T Consensus 502 L~l~~N~~~~~~~~ 515 (549)
T 2z81_A 502 IWLHTNPWDCSCPR 515 (549)
T ss_dssp EECCSSCBCCCHHH
T ss_pred EEecCCCccCCCcc
Confidence 99999999988774
No 15
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00 E-value=2.5e-48 Score=445.70 Aligned_cols=513 Identities=22% Similarity=0.235 Sum_probs=415.3
Q ss_pred EECCCCCcceeccccCCCCCCCCEEECCCCCCcccCChhhhCCCCCCEEeCCCCCCcccCCccccCCCCCcEEEccCccC
Q 039514 58 LDTSQFNLQGTIPSQLGNLSSLTILNLSHNKLSGSVPSSIYTMHTLKFLDFTDNQLSGSVSSFVFNMSSIVDIRLTNNRL 137 (790)
Q Consensus 58 Ldl~~~~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l 137 (790)
++.++.+++ .+|..+. +++++|+|++|.++++.+.+|..+++|++|+|++|++++..+..|.++++|++|+|++|.+
T Consensus 12 ~~c~~~~l~-~ip~~l~--~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l 88 (570)
T 2z63_A 12 YQCMELNFY-KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPI 88 (570)
T ss_dssp EECCSSCCS-SCCSSSC--SSCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCC
T ss_pred EEeCCCCcc-ccCCCcc--ccccEEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcC
Confidence 556666665 4566664 5899999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCchhhhccCCCCCEEECCCCcCcccCCcCCCCCCCCCeeecccCcccc-cCcccccccCCCCceecccccccceEEc
Q 039514 138 SGELPKNICNYLPHLKALFLDKNMFHGKIPSALSKCKQLQQLNLQLNNLSG-AIPKEIGNLTMLKGISLLYNKLQEALVL 216 (790)
Q Consensus 138 ~~~lp~~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~-~~~~~~~~l~~L~~L~l~~n~l~~~l~l 216 (790)
+ .+|...|..+++|++|++++|.+++..+..|+++++|++|++++|.+++ .+|..|+++++|++|++++|++
T Consensus 89 ~-~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l------ 161 (570)
T 2z63_A 89 Q-SLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKI------ 161 (570)
T ss_dssp C-EECTTTTTTCTTCCEEECTTSCCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCC------
T ss_pred C-ccCHhhhcCccccccccccccccccCCCccccccccccEEecCCCccceecChhhhcccCCCCEEeCcCCcc------
Confidence 8 6666667889999999999999998777789999999999999999987 3689999999999966665554
Q ss_pred ccccCccccCccccCCCCC----cEEEcccCCCcccCCcchhcCCCCcceEeecCCcccc-cCCccccCCCCCCEEeccC
Q 039514 217 GMNNLVGVLPATIFNMSTL----KVLILINNSLSGSLPSRIDLSLPTVEVLILALNRFFG-TIPSSITNASKLTVLELGG 291 (790)
Q Consensus 217 ~~n~l~~~~p~~~~~l~~L----~~L~L~~n~l~~~~p~~~~~~l~~L~~L~L~~n~~~~-~~p~~~~~l~~L~~L~l~~ 291 (790)
.+..|..+..+++| +.|++++|.+.+..|..+. ...|+.++++.|.... .++..+..+++++.+.+..
T Consensus 162 -----~~~~~~~~~~l~~L~~~~~~L~l~~n~l~~~~~~~~~--~~~L~~L~l~~n~~~~~~~~~~~~~l~~l~~~~l~~ 234 (570)
T 2z63_A 162 -----QSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFK--EIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVL 234 (570)
T ss_dssp -----CEECGGGGHHHHTCTTCCCEEECTTCCCCEECTTTTT--TCEEEEEEEESCCSCTTHHHHHHHTTTTCEEEEEEE
T ss_pred -----ceecHHHccchhccchhhhhcccCCCCceecCHHHhc--cCcceeEecccccccccchhhhhcCccccceeeecc
Confidence 44566777777777 7888888888754444332 2367777777663321 2344455556665555433
Q ss_pred CcccccCcccccCCCCCccccccCCcccCCCCcccccccCCCCCCCCEEEccCC-CCcccCCchhhhhcccCcEEEeecC
Q 039514 292 NTFSGLIPDTIGNLRNLEWLNLSKNSLTSSTSKLSFLSSLANCKKLRSLKLAGN-PLDGFLPSSIGNLSKSLETLVIANC 370 (790)
Q Consensus 292 n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~l~~l~~L~~L~Ls~n-~l~~~~p~~~~~l~~~L~~L~l~~n 370 (790)
..+. ...+++.+ ....+ ..+..+ .++.++++++ .+.+..|..+..+ ++|++|++++|
T Consensus 235 ~~~~--------~~~~l~~~--~~~~~----------~~l~~l-~l~~l~l~~~~~~~~~~~~~~~~l-~~L~~L~l~~~ 292 (570)
T 2z63_A 235 GEFR--------NEGNLEKF--DKSAL----------EGLCNL-TIEEFRLAYLDYYLDDIIDLFNCL-TNVSSFSLVSV 292 (570)
T ss_dssp EECC--------CCSSCEEC--CTTTT----------GGGGGS-EEEEEEEEETTEEESCSTTTTGGG-TTCSEEEEESC
T ss_pred cccc--------Cchhhhhc--chhhh----------cccccc-chhhhhhhcchhhhhhchhhhcCc-CcccEEEecCc
Confidence 2221 11111111 11111 111111 3567778777 6666777777776 68999999999
Q ss_pred cCcccCchhhhccCCcceeeeccccccCccccccccccccCeEEeeccccCccCCccccccccccceecccCcccccC--
Q 039514 371 SISGNIPQAISNLSNLLTLVLERNKLTGPISITFGRLQKLQGLYLASNNLVGSFPDELCHIGRLAELALLDNRHSGSI-- 448 (790)
Q Consensus 371 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~-- 448 (790)
.+. .+|..+..+ +|++|++++|.+..... ..+++|+.|++++|.+.+..+. ..+++|+.|++++|.+.+..
T Consensus 293 ~l~-~l~~~~~~~-~L~~L~l~~n~~~~l~~---~~l~~L~~L~l~~n~~~~~~~~--~~~~~L~~L~l~~n~l~~~~~~ 365 (570)
T 2z63_A 293 TIE-RVKDFSYNF-GWQHLELVNCKFGQFPT---LKLKSLKRLTFTSNKGGNAFSE--VDLPSLEFLDLSRNGLSFKGCC 365 (570)
T ss_dssp EEC-SCCBCCSCC-CCSEEEEESCBCSSCCB---CBCSSCCEEEEESCBSCCBCCC--CBCTTCCEEECCSSCCBEEEEE
T ss_pred cch-hhhhhhccC-CccEEeeccCcccccCc---ccccccCEEeCcCCcccccccc--ccCCCCCEEeCcCCccCccccc
Confidence 998 578888888 99999999999985443 4788999999999999877665 78899999999999998654
Q ss_pred CccccCCCCCCeeeccCCccccccCcccccCCCCceEeccCCccccccc-ccccccccCceEeCcCCcccccCcccccCC
Q 039514 449 PSCVSNLTSLRYLYLGSNRFTFVIPSTFWSLKDILFFDFSSNFLVGTLS-FDIGNLKVLLGINLSENNLSGDMPATIGGL 527 (790)
Q Consensus 449 p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~-~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l 527 (790)
|..+..+++|++|++++|.+.+..+. +..+++|+.|++++|.+.+..+ ..+..+++|++|++++|.+.+..|..|.++
T Consensus 366 ~~~~~~~~~L~~L~l~~n~l~~~~~~-~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l 444 (570)
T 2z63_A 366 SQSDFGTTSLKYLDLSFNGVITMSSN-FLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGL 444 (570)
T ss_dssp EHHHHTCSCCCEEECCSCSEEEEEEE-EETCTTCCEEECTTSEEESCTTSCTTTTCTTCCEEECTTSCCEECCTTTTTTC
T ss_pred cccccccCccCEEECCCCcccccccc-ccccCCCCEEEccCCccccccchhhhhcCCCCCEEeCcCCcccccchhhhhcC
Confidence 77889999999999999999987666 9999999999999999998766 568899999999999999999999999999
Q ss_pred cccCeeeCCCCccc-ccCCccccCCCCCCEEECCCCcCcccCCccccccCCCCeEeCCCCcceecCCCC-cccCCCCccc
Q 039514 528 KDLQFMDLAYNRLE-GPIPESFGDLTSLEVLNLSKNKISGSIPKSMEKLFYLRELNLSFNELEGEIPSG-GIFANFTAES 605 (790)
Q Consensus 528 ~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~-~~~~~~~~~~ 605 (790)
++|++|++++|.++ +.+|..+..+++|++|++++|++++..|..|..+++|++|++++|++++.+|.. ..+..+....
T Consensus 445 ~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 524 (570)
T 2z63_A 445 SSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQKIW 524 (570)
T ss_dssp TTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEE
T ss_pred CcCcEEECcCCcCccccchhhhhcccCCCEEECCCCccccCChhhhhcccCCCEEeCCCCcCCCCCHHHhhcccCCcEEE
Confidence 99999999999998 578999999999999999999999998999999999999999999999876653 4566778888
Q ss_pred ccCCcCCCCCCC
Q 039514 606 FMGNELLCGLPN 617 (790)
Q Consensus 606 ~~~n~~l~~~p~ 617 (790)
+.+|++.|.+|.
T Consensus 525 l~~N~~~~~~~~ 536 (570)
T 2z63_A 525 LHTNPWDCSCPR 536 (570)
T ss_dssp CCSSCBCCCTTT
T ss_pred ecCCcccCCCcc
Confidence 999999998875
No 16
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=100.00 E-value=4.6e-48 Score=449.76 Aligned_cols=518 Identities=21% Similarity=0.202 Sum_probs=376.8
Q ss_pred cEEEEECCCCCcceeccccCCCCCCCCEEECCCCCCcccCChhhhCCCCCCEEeCCCCCCcccCCccccCCCCCcEEEcc
Q 039514 54 RVTALDTSQFNLQGTIPSQLGNLSSLTILNLSHNKLSGSVPSSIYTMHTLKFLDFTDNQLSGSVSSFVFNMSSIVDIRLT 133 (790)
Q Consensus 54 ~v~~Ldl~~~~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~ 133 (790)
.++.|||++|.|++..|.+|.++++|++|||++|+|+++.+.+|.++++|++|+|++|+|++..+..|.++++|++|+|+
T Consensus 53 ~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~Ls 132 (635)
T 4g8a_A 53 STKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAV 132 (635)
T ss_dssp TCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEECT
T ss_pred CCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEECC
Confidence 46677777777776666677777777777777777776666677777777777777777776666667777777777777
Q ss_pred CccCcccCchhhhccCCCCCEEECCCCcCcc-cCCcCCCCCCCCCeeecccCcccccCcccccccCCCCceecccccccc
Q 039514 134 NNRLSGELPKNICNYLPHLKALFLDKNMFHG-KIPSALSKCKQLQQLNLQLNNLSGAIPKEIGNLTMLKGISLLYNKLQE 212 (790)
Q Consensus 134 ~N~l~~~lp~~~~~~l~~L~~L~L~~N~i~~-~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 212 (790)
+|+++ .+|...|.++++|++|+|++|.++. ..|..++.+++|++|++++|++++..+..|..+.+++.+..
T Consensus 133 ~N~l~-~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~l~~~~~------- 204 (635)
T 4g8a_A 133 ETNLA-SLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNL------- 204 (635)
T ss_dssp TSCCC-CSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCC-------
T ss_pred CCcCC-CCChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCccccccccccccchhhhhhhhh-------
Confidence 77776 5666555667777777777777664 34566667777777777777777666666666655543221
Q ss_pred eEEcccccCccccCccccCCCCCcEEEcccCCCcccCCcchhcCCCCcceEeecCCcc------cccCCccccCCCCCCE
Q 039514 213 ALVLGMNNLVGVLPATIFNMSTLKVLILINNSLSGSLPSRIDLSLPTVEVLILALNRF------FGTIPSSITNASKLTV 286 (790)
Q Consensus 213 ~l~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~~l~~L~~L~L~~n~~------~~~~p~~~~~l~~L~~ 286 (790)
.++++.|.+..+.+..+. ...++.+++.+|.....++......++.++...+..+.. .......+.....+..
T Consensus 205 ~~~ls~n~l~~i~~~~~~-~~~~~~l~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~ 283 (635)
T 4g8a_A 205 SLDLSLNPMNFIQPGAFK-EIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTI 283 (635)
T ss_dssp EEECTTCCCCEECTTTTT-TCEEEEEEEESCCSSHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCTTTTGGGGGSEE
T ss_pred hhhcccCcccccCccccc-chhhhhhhhhcccccccccchhhcCCcccccccccccccccccccccccccccccccchhh
Confidence 255666666665554443 345677788777665444444445566666655543322 2222333444455555
Q ss_pred EeccCCccc---ccCcccccCCCCCccccccCCcccCCCCcccccccCCCCCCCCEEEccCCCCcccCCchhhhhcccCc
Q 039514 287 LELGGNTFS---GLIPDTIGNLRNLEWLNLSKNSLTSSTSKLSFLSSLANCKKLRSLKLAGNPLDGFLPSSIGNLSKSLE 363 (790)
Q Consensus 287 L~l~~n~l~---~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~~L~ 363 (790)
.++..+... ...+..+..+.+++.+++.++.+.... .+.....|+.|++.+|.+....+..+ ..|+
T Consensus 284 ~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~-------~~~~~~~L~~L~l~~~~~~~~~~~~l----~~L~ 352 (635)
T 4g8a_A 284 EEFRLAYLDYYLDGIIDLFNCLTNVSSFSLVSVTIERVK-------DFSYNFGWQHLELVNCKFGQFPTLKL----KSLK 352 (635)
T ss_dssp EEEEEECCCSCEEECTTTTGGGTTCSEEEEESCEEEECG-------GGGSCCCCSEEEEESCEESSCCCCBC----TTCC
T ss_pred hhhhhhhhcccccchhhhhhhhccccccccccccccccc-------ccccchhhhhhhcccccccCcCcccc----hhhh
Confidence 555443322 122344666778888888887776543 34556778899999888775444322 4688
Q ss_pred EEEeecCcCcccCchhhhccCCcceeeeccccccC--ccccccccccccCeEEeeccccCccCCccccccccccceeccc
Q 039514 364 TLVIANCSISGNIPQAISNLSNLLTLVLERNKLTG--PISITFGRLQKLQGLYLASNNLVGSFPDELCHIGRLAELALLD 441 (790)
Q Consensus 364 ~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~--~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~ 441 (790)
.+++..|.+.... ....+++|+.|++++|.+.. ..+..+..+.+|+.+++..|.... .+..+..+++|+.+++..
T Consensus 353 ~l~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~~~~~~~~~-~~~~~~~l~~L~~l~l~~ 429 (635)
T 4g8a_A 353 RLTFTSNKGGNAF--SEVDLPSLEFLDLSRNGLSFKGCCSQSDFGTISLKYLDLSFNGVIT-MSSNFLGLEQLEHLDFQH 429 (635)
T ss_dssp EEEEESCCSCCBC--CCCBCTTCCEEECCSSCCBEEEECCHHHHSCSCCCEEECCSCSEEE-ECSCCTTCTTCCEEECTT
T ss_pred hcccccccCCCCc--ccccccccccchhhccccccccccccchhhhhhhhhhhcccccccc-ccccccccccccchhhhh
Confidence 8999888876432 34578899999999998864 334455677889999999888774 455677889999999988
Q ss_pred CcccccCC-ccccCCCCCCeeeccCCccccccCcccccCCCCceEeccCCccc-ccccccccccccCceEeCcCCccccc
Q 039514 442 NRHSGSIP-SCVSNLTSLRYLYLGSNRFTFVIPSTFWSLKDILFFDFSSNFLV-GTLSFDIGNLKVLLGINLSENNLSGD 519 (790)
Q Consensus 442 n~~~~~~p-~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~-~~~~~~~~~l~~L~~L~Ls~N~l~~~ 519 (790)
+......+ ..+..+++++.++++.|.+.+..+..+..++.++.|++++|.+. +..|..+..+++|++|+|++|+|+++
T Consensus 430 ~~~~~~~~~~~~~~l~~l~~l~ls~n~l~~~~~~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l 509 (635)
T 4g8a_A 430 SNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQL 509 (635)
T ss_dssp SEEESTTSSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEE
T ss_pred ccccccccccccccccccccccccccccccccccccccchhhhhhhhhhcccccccCchhhhhccccCEEECCCCccCCc
Confidence 87766544 46788899999999999999999999999999999999999754 45778889999999999999999999
Q ss_pred CcccccCCcccCeeeCCCCcccccCCccccCCCCCCEEECCCCcCcccCCcccccc-CCCCeEeCCCCcceecCCC
Q 039514 520 MPATIGGLKDLQFMDLAYNRLEGPIPESFGDLTSLEVLNLSKNKISGSIPKSMEKL-FYLRELNLSFNELEGEIPS 594 (790)
Q Consensus 520 ~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l-~~L~~L~Ls~N~l~~~~p~ 594 (790)
.|..|.++++|++|+|++|+|++..|..|.++++|++|+|++|+|++..|..|..+ ++|++|+|++|++.|.+..
T Consensus 510 ~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~~C~C~~ 585 (635)
T 4g8a_A 510 SPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCEH 585 (635)
T ss_dssp CTTTTTTCTTCCEEECTTSCCCBCCCGGGTTCTTCCEEECTTSCCCBCCSSCTTCCCTTCCEEECTTCCBCCSGGG
T ss_pred ChHHHcCCCCCCEEECCCCcCCCCChhHHhCCCCCCEEECCCCcCCCCCHHHHHhhhCcCCEEEeeCCCCcccCCc
Confidence 99999999999999999999999989999999999999999999999999999888 6899999999999886654
No 17
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=5.4e-48 Score=437.20 Aligned_cols=461 Identities=19% Similarity=0.221 Sum_probs=320.5
Q ss_pred EEEECCCCCcceeccccCCCCCCCCEEECCCCCCcccCChhhhCCCCCCEEeCCCCCCcccCCccccCCCCCcEEEccCc
Q 039514 56 TALDTSQFNLQGTIPSQLGNLSSLTILNLSHNKLSGSVPSSIYTMHTLKFLDFTDNQLSGSVSSFVFNMSSIVDIRLTNN 135 (790)
Q Consensus 56 ~~Ldl~~~~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N 135 (790)
+.||+++++++ .+|..+. ++|++|+|++|.+++..|.+|..+++|++|+|++|++++..|..|.++++|++|+|++|
T Consensus 3 ~~l~ls~n~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N 79 (520)
T 2z7x_B 3 FLVDRSKNGLI-HVPKDLS--QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHN 79 (520)
T ss_dssp CEEECTTSCCS-SCCCSCC--TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSS
T ss_pred ceEecCCCCcc-ccccccc--ccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCC
Confidence 36899999998 5787776 89999999999999988899999999999999999999999999999999999999999
Q ss_pred cCcccCchhhhccCCCCCEEECCCCcCcc-cCCcCCCCCCCCCeeecccCcccccCcccccccCCC--Cceecccccccc
Q 039514 136 RLSGELPKNICNYLPHLKALFLDKNMFHG-KIPSALSKCKQLQQLNLQLNNLSGAIPKEIGNLTML--KGISLLYNKLQE 212 (790)
Q Consensus 136 ~l~~~lp~~~~~~l~~L~~L~L~~N~i~~-~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L--~~L~l~~n~l~~ 212 (790)
+++ .+|.. .+++|++|+|++|.+++ ..|..|+++++|++|++++|.+++ ..+..+++| +.|++++|.+..
T Consensus 80 ~l~-~lp~~---~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~---~~~~~l~~L~L~~L~l~~n~l~~ 152 (520)
T 2z7x_B 80 KLV-KISCH---PTVNLKHLDLSFNAFDALPICKEFGNMSQLKFLGLSTTHLEK---SSVLPIAHLNISKVLLVLGETYG 152 (520)
T ss_dssp CCC-EEECC---CCCCCSEEECCSSCCSSCCCCGGGGGCTTCCEEEEEESSCCG---GGGGGGTTSCEEEEEEEECTTTT
T ss_pred cee-ecCcc---ccCCccEEeccCCccccccchhhhccCCcceEEEecCcccch---hhccccccceeeEEEeecccccc
Confidence 999 78876 68999999999999997 478899999999999999999875 456667777 665544443310
Q ss_pred eEEcccccCccccCccccCCC-CCcEEEcccCCCcccCCcchhcCCCCcceEeecCCcccccCCccccCCCCCCEEeccC
Q 039514 213 ALVLGMNNLVGVLPATIFNMS-TLKVLILINNSLSGSLPSRIDLSLPTVEVLILALNRFFGTIPSSITNASKLTVLELGG 291 (790)
Q Consensus 213 ~l~l~~n~l~~~~p~~~~~l~-~L~~L~L~~n~l~~~~p~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~l~~ 291 (790)
.+..|..+..+. +...+++++|.+.+.++...+..+ ++|+.|++++
T Consensus 153 ---------~~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l------------------------~~L~~L~l~~ 199 (520)
T 2z7x_B 153 ---------EKEDPEGLQDFNTESLHIVFPTNKEFHFILDVSVKTV------------------------ANLELSNIKC 199 (520)
T ss_dssp ---------SSCCTTTTTTCCEEEEEEECCSSSCCCCCCCCCCTTC------------------------SEEEECCEEE
T ss_pred ---------cccccccccccccceEEEEeccCcchhhhhhhhhhcc------------------------cceeeccccc
Confidence 455666666654 233455666666555544444344 4445555554
Q ss_pred Cc-------ccccCcccccCCCCCccccccCCcccCCCCcccccccCCCCCCCCEEEccCCCCcccCCchhhhhcccCcE
Q 039514 292 NT-------FSGLIPDTIGNLRNLEWLNLSKNSLTSSTSKLSFLSSLANCKKLRSLKLAGNPLDGFLPSSIGNLSKSLET 364 (790)
Q Consensus 292 n~-------l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~~L~~ 364 (790)
|. +.+.+| .+..+++|+.|++++|.+.+.. +.+. +.... .++|++
T Consensus 200 n~~~~~~~~~~~~~~-~l~~l~~L~~L~l~~~~l~~~~------------------------~~~~-~~~~~--~~~L~~ 251 (520)
T 2z7x_B 200 VLEDNKCSYFLSILA-KLQTNPKLSNLTLNNIETTWNS------------------------FIRI-LQLVW--HTTVWY 251 (520)
T ss_dssp CCSTTTTHHHHHHHH-GGGGCTTCCEEEEEEEEEEHHH------------------------HHHH-HHHHH--TSSCSE
T ss_pred cccccccceeecchh-hhccccchhhccccccccCHHH------------------------HHHH-HHHhh--hCcccE
Confidence 43 333333 3444444444444444332210 0000 00000 024455
Q ss_pred EEeecCcCcccCchhh-----hccCCcceeeeccccccCccccccccc---cccCeEEeeccccCccCCccccccccccc
Q 039514 365 LVIANCSISGNIPQAI-----SNLSNLLTLVLERNKLTGPISITFGRL---QKLQGLYLASNNLVGSFPDELCHIGRLAE 436 (790)
Q Consensus 365 L~l~~n~l~~~~p~~~-----~~l~~L~~L~L~~N~l~~~~~~~~~~l---~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 436 (790)
|++++|.+++.+|..+ ..+++|+.+++++|.+ ..+...+..+ .+|+.|++++|.+.... .+..+++|++
T Consensus 252 L~l~~n~l~~~~p~~~~~~~~~~l~~L~~l~l~~n~~-~~p~~~~~~~~~~~~L~~L~l~~n~l~~~~--~~~~l~~L~~ 328 (520)
T 2z7x_B 252 FSISNVKLQGQLDFRDFDYSGTSLKALSIHQVVSDVF-GFPQSYIYEIFSNMNIKNFTVSGTRMVHML--CPSKISPFLH 328 (520)
T ss_dssp EEEEEEEEESCCCCCCCCCCSCCCCEEEEEEEEECCC-CSCTHHHHHHHHTCCCSEEEEESSCCCCCC--CCSSCCCCCE
T ss_pred EEeecccccCccccchhhcccccCceeEeccccccce-ecchhhhhcccccCceeEEEcCCCcccccc--chhhCCcccE
Confidence 5555555544444444 4555555555555555 2221222222 34566666666554321 1145566666
Q ss_pred eecccCcccccCCccccCCCCCCeeeccCCcccc--ccCcccccCCCCceEeccCCccccccc-ccccccccCceEeCcC
Q 039514 437 LALLDNRHSGSIPSCVSNLTSLRYLYLGSNRFTF--VIPSTFWSLKDILFFDFSSNFLVGTLS-FDIGNLKVLLGINLSE 513 (790)
Q Consensus 437 L~l~~n~~~~~~p~~~~~l~~L~~L~L~~N~l~~--~~~~~~~~l~~L~~L~ls~N~l~~~~~-~~~~~l~~L~~L~Ls~ 513 (790)
|++++|++.+..|..+..+++|++|++++|++++ ..|..+..+++|++|++++|.+++.+| ..+..++.|++|++++
T Consensus 329 L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~Ls~ 408 (520)
T 2z7x_B 329 LDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSS 408 (520)
T ss_dssp EECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCCEEECCS
T ss_pred EEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCccCCEEECcC
Confidence 6666666666666677777777777777777775 345667777888888888888877444 3477888899999999
Q ss_pred CcccccCcccccCCcccCeeeCCCCcccccCCccccCCCCCCEEECCCCcCcccCCc-cccccCCCCeEeCCCCcceecC
Q 039514 514 NNLSGDMPATIGGLKDLQFMDLAYNRLEGPIPESFGDLTSLEVLNLSKNKISGSIPK-SMEKLFYLRELNLSFNELEGEI 592 (790)
Q Consensus 514 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~~~~ 592 (790)
|++++..|..+. ++|+.|++++|+++ .+|..+..+++|++|++++|+++. +|. .+..+++|++|++++|+++|.+
T Consensus 409 N~l~~~~~~~l~--~~L~~L~Ls~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~-l~~~~~~~l~~L~~L~l~~N~~~c~c 484 (520)
T 2z7x_B 409 NILTDTIFRCLP--PRIKVLDLHSNKIK-SIPKQVVKLEALQELNVASNQLKS-VPDGIFDRLTSLQKIWLHTNPWDCSC 484 (520)
T ss_dssp SCCCGGGGGSCC--TTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CCTTTTTTCTTCCEEECCSSCBCCCH
T ss_pred CCCCcchhhhhc--ccCCEEECCCCccc-ccchhhhcCCCCCEEECCCCcCCc-cCHHHhccCCcccEEECcCCCCcccC
Confidence 999877777664 78999999999999 677777799999999999999995 555 4889999999999999999876
Q ss_pred CC
Q 039514 593 PS 594 (790)
Q Consensus 593 p~ 594 (790)
+.
T Consensus 485 ~~ 486 (520)
T 2z7x_B 485 PR 486 (520)
T ss_dssp HH
T ss_pred Cc
Confidence 64
No 18
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=5.5e-49 Score=453.49 Aligned_cols=519 Identities=18% Similarity=0.201 Sum_probs=389.1
Q ss_pred HHHHHHHHHHHhhcCCCCCccccCCCCCCCCC----CCcccc--ccCC-CCCcEEEEECCCCCcceeccccCCCCCCCCE
Q 039514 9 TTDQQALLALKDHIISDPTNLLAHNWTSNASV----CTWIGI--TCDV-NSHRVTALDTSQFNLQGTIPSQLGNLSSLTI 81 (790)
Q Consensus 9 ~~~~~~l~~~~~~~~~~~~~~~~~~w~~~~~~----c~w~gv--~c~~-~~~~v~~Ldl~~~~l~~~~~~~~~~l~~L~~ 81 (790)
.++...-.++++-.. .. -..+|...++. |.|..- .|.+ ....|++ +.. .+++.
T Consensus 26 ~~~~~d~~aL~~~~~--~~--~~~~w~~~~~~~~~~~~W~~~~~~c~w~~~~GV~C---~~~-------------~~V~~ 85 (636)
T 4eco_A 26 AEYIKDYLALKEIWD--AL--NGKNWSQQGFGTQPGANWNFNKELDMWGAQPGVSL---NSN-------------GRVTG 85 (636)
T ss_dssp CHHHHHHHHHHHHHH--HT--TGGGCCCCC------CCCCCSSCGGGTTCCTTEEE---CTT-------------CCEEE
T ss_pred hhHHHHHHHHHHHHH--Hc--CCCCcccCCcCCccCCCCCCCCCcccccCCCCeEE---cCC-------------CCEEE
Confidence 344556677776541 11 12358754432 479632 3555 1124664 100 37889
Q ss_pred EECCCCCCcccCChhhhCCCCCCEEeCCCCCCc------c------cCCccccCCCCCcEEEccCccCcccCchhhhccC
Q 039514 82 LNLSHNKLSGSVPSSIYTMHTLKFLDFTDNQLS------G------SVSSFVFNMSSIVDIRLTNNRLSGELPKNICNYL 149 (790)
Q Consensus 82 L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~n~l~------~------~~~~~~~~l~~L~~L~L~~N~l~~~lp~~~~~~l 149 (790)
|+|++|.+.|.+|.+|+.+++|++|||++|.+. + .+|... +..|+ ++++.|.+.+.+|..+...+
T Consensus 86 L~L~~~~l~g~lp~~l~~L~~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~--~~~l~-l~l~~~~l~~~~~~~~~~~~ 162 (636)
T 4eco_A 86 LSLEGFGASGRVPDAIGQLTELEVLALGSHGEKVNERLFGPKGISANMSDEQ--KQKMR-MHYQKTFVDYDPREDFSDLI 162 (636)
T ss_dssp EECTTSCCEEEECGGGGGCTTCCEEESCCGGGGGTCCSBSTTSBCTTCCHHH--HHHHH-THHHHHHTCCCGGGGSCHHH
T ss_pred EEecCcccCCcCChHHhcCccceEEECcCCccccCCccccccccccCchHHH--HHHHH-hhHHHhhhccCchhhHHHHH
Confidence 999999999999999999999999999999762 2 222222 34455 66777777766665543223
Q ss_pred CCCCEEECCCCcCcccCCcCCCCCCCCCeeecc--cCcccccCcccccccCCCCceecccccccce------EEcccccC
Q 039514 150 PHLKALFLDKNMFHGKIPSALSKCKQLQQLNLQ--LNNLSGAIPKEIGNLTMLKGISLLYNKLQEA------LVLGMNNL 221 (790)
Q Consensus 150 ~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~L~--~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~------l~l~~n~l 221 (790)
..+..+++....+.. .....++.+.+. .|++++ +|.+|+++++|++|++++|.+... ...+.+..
T Consensus 163 ~~l~~~~l~~~~~~~------~~~~~l~~l~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~ 235 (636)
T 4eco_A 163 KDCINSDPQQKSIKK------SSRITLKDTQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYA 235 (636)
T ss_dssp HHHHHHCTTSCCCCC------CCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHH
T ss_pred HHHhhcCcccccccc------ccccchhhhhhccccCCCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchh
Confidence 333333443322221 112233333333 577777 777788888888755555443310 00000111
Q ss_pred ccccCcccc--CCCCCcEEEcccCCCcccCCcchhcCCCCcceEeecCCc-ccc-cCCccccCC------CCCCEEeccC
Q 039514 222 VGVLPATIF--NMSTLKVLILINNSLSGSLPSRIDLSLPTVEVLILALNR-FFG-TIPSSITNA------SKLTVLELGG 291 (790)
Q Consensus 222 ~~~~p~~~~--~l~~L~~L~L~~n~l~~~~p~~~~~~l~~L~~L~L~~n~-~~~-~~p~~~~~l------~~L~~L~l~~ 291 (790)
.+.+|..++ ++++|++|++++|.+.+.+|..+. .+++|+.|++++|. +.+ .+|..++.+ ++|++|++++
T Consensus 236 ~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~-~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~ 314 (636)
T 4eco_A 236 QQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLK-ALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGY 314 (636)
T ss_dssp HHHTTSCCCGGGCTTCCEEEEECCTTCSSCCTTTT-TCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCS
T ss_pred cccCchhhhhcccCCCCEEEecCCcCCccChHHHh-cCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCC
Confidence 123899988 999999999999999999997766 79999999999998 998 899888776 9999999999
Q ss_pred CcccccCcc--cccCCCCCccccccCCccc-CCCCcccccccCCCCCCCCEEEccCCCCcccCCchhhhhcccCcEEEee
Q 039514 292 NTFSGLIPD--TIGNLRNLEWLNLSKNSLT-SSTSKLSFLSSLANCKKLRSLKLAGNPLDGFLPSSIGNLSKSLETLVIA 368 (790)
Q Consensus 292 n~l~~~~~~--~~~~l~~L~~L~Ls~n~l~-~~~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~~L~~L~l~ 368 (790)
|.++ .+|. .|..+++|++|++++|.++ .++ .+..+++|++|++++|.+. .+|..+..+..+|++|+++
T Consensus 315 n~l~-~ip~~~~l~~l~~L~~L~L~~N~l~g~ip-------~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~~L~~L~Ls 385 (636)
T 4eco_A 315 NNLK-TFPVETSLQKMKKLGMLECLYNQLEGKLP-------AFGSEIKLASLNLAYNQIT-EIPANFCGFTEQVENLSFA 385 (636)
T ss_dssp SCCS-SCCCHHHHTTCTTCCEEECCSCCCEEECC-------CCEEEEEESEEECCSSEEE-ECCTTSEEECTTCCEEECC
T ss_pred CcCC-ccCchhhhccCCCCCEEeCcCCcCccchh-------hhCCCCCCCEEECCCCccc-cccHhhhhhcccCcEEEcc
Confidence 9999 6677 8999999999999999998 433 4677889999999999998 7788888874339999999
Q ss_pred cCcCcccCchhhhccC--CcceeeeccccccCccccccc-------cccccCeEEeeccccCccCCccccccccccceec
Q 039514 369 NCSISGNIPQAISNLS--NLLTLVLERNKLTGPISITFG-------RLQKLQGLYLASNNLVGSFPDELCHIGRLAELAL 439 (790)
Q Consensus 369 ~n~l~~~~p~~~~~l~--~L~~L~L~~N~l~~~~~~~~~-------~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l 439 (790)
+|.++ .+|..+..++ +|++|++++|.+.+..|..+. .+++|++|++++|.+....+..+..+++|+.|++
T Consensus 386 ~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~~~~~~~L~~L~Ls~N~l~~lp~~~~~~l~~L~~L~L 464 (636)
T 4eco_A 386 HNKLK-YIPNIFDAKSVSVMSAIDFSYNEIGSVDGKNFDPLDPTPFKGINVSSINLSNNQISKFPKELFSTGSPLSSINL 464 (636)
T ss_dssp SSCCS-SCCSCCCTTCSSCEEEEECCSSCTTTTTTCSSCTTCSSCCCCCCEEEEECCSSCCCSCCTHHHHTTCCCSEEEC
T ss_pred CCcCc-ccchhhhhcccCccCEEECcCCcCCCcchhhhcccccccccCCCCCEEECcCCccCcCCHHHHccCCCCCEEEC
Confidence 99999 7888877655 899999999999998888887 7889999999999999544445667999999999
Q ss_pred ccCcccccCCcc-ccCC-------CCCCeeeccCCccccccCcccc--cCCCCceEeccCCcccccccccccccccCceE
Q 039514 440 LDNRHSGSIPSC-VSNL-------TSLRYLYLGSNRFTFVIPSTFW--SLKDILFFDFSSNFLVGTLSFDIGNLKVLLGI 509 (790)
Q Consensus 440 ~~n~~~~~~p~~-~~~l-------~~L~~L~L~~N~l~~~~~~~~~--~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L 509 (790)
++|++. .+|.. +... ++|++|+|++|+++ .+|..+. .+++|+.|++++|++++ +|..+..+++|+.|
T Consensus 465 s~N~l~-~i~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~-ip~~~~~l~~L~~L 541 (636)
T 4eco_A 465 MGNMLT-EIPKNSLKDENENFKNTYLLTSIDLRFNKLT-KLSDDFRATTLPYLVGIDLSYNSFSK-FPTQPLNSSTLKGF 541 (636)
T ss_dssp CSSCCS-BCCSSSSEETTEECTTGGGCCEEECCSSCCC-BCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCSSCCEE
T ss_pred CCCCCC-CcCHHHhccccccccccCCccEEECcCCcCC-ccChhhhhccCCCcCEEECCCCCCCC-cChhhhcCCCCCEE
Confidence 999998 55544 3333 39999999999999 5677775 88888888888888877 67777777778888
Q ss_pred eCcCCcccccCcccccCCcccCeeeCCCCcccccCCccccCCCCCCEEECCCCcCcccCCccccccCCCCeEeCCCCcce
Q 039514 510 NLSENNLSGDMPATIGGLKDLQFMDLAYNRLEGPIPESFGDLTSLEVLNLSKNKISGSIPKSMEKLFYLRELNLSFNELE 589 (790)
Q Consensus 510 ~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 589 (790)
+|++|+ ++++|++.+.+|..+..+++|++|+|++|++ +.+|..+. ++|+.|++++|++.
T Consensus 542 ~Ls~N~------------------~ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l-~~ip~~~~--~~L~~L~Ls~N~l~ 600 (636)
T 4eco_A 542 GIRNQR------------------DAQGNRTLREWPEGITLCPSLTQLQIGSNDI-RKVNEKIT--PNISVLDIKDNPNI 600 (636)
T ss_dssp ECCSCB------------------CTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSCCC--TTCCEEECCSCTTC
T ss_pred ECCCCc------------------ccccCcccccChHHHhcCCCCCEEECCCCcC-CccCHhHh--CcCCEEECcCCCCc
Confidence 877776 5688999999999999999999999999999 57888766 79999999999997
Q ss_pred ecC
Q 039514 590 GEI 592 (790)
Q Consensus 590 ~~~ 592 (790)
..-
T Consensus 601 ~~~ 603 (636)
T 4eco_A 601 SID 603 (636)
T ss_dssp EEE
T ss_pred ccc
Confidence 643
No 19
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=100.00 E-value=5.8e-46 Score=432.04 Aligned_cols=531 Identities=21% Similarity=0.203 Sum_probs=424.6
Q ss_pred EECCCCCcceeccccCCCCCCCCEEECCCCCCcccCChhhhCCCCCCEEeCCCCCCcccCCccccCCCCCcEEEccCccC
Q 039514 58 LDTSQFNLQGTIPSQLGNLSSLTILNLSHNKLSGSVPSSIYTMHTLKFLDFTDNQLSGSVSSFVFNMSSIVDIRLTNNRL 137 (790)
Q Consensus 58 Ldl~~~~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l 137 (790)
.|.++.+++ .+|..+. +++++|||++|+|+++.+.+|.++++|++|||++|+|+++.+.+|.++++|++|+|++|+|
T Consensus 36 ~~c~~~~l~-~vP~~lp--~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l 112 (635)
T 4g8a_A 36 YQCMELNFY-KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPI 112 (635)
T ss_dssp EECTTSCCS-SCCSSSC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCC
T ss_pred EECCCCCcC-ccCCCCC--cCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcC
Confidence 466777777 5687775 4899999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCchhhhccCCCCCEEECCCCcCcccCCcCCCCCCCCCeeecccCccccc-CcccccccCCCCceecccccccceEEc
Q 039514 138 SGELPKNICNYLPHLKALFLDKNMFHGKIPSALSKCKQLQQLNLQLNNLSGA-IPKEIGNLTMLKGISLLYNKLQEALVL 216 (790)
Q Consensus 138 ~~~lp~~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~-~~~~~~~l~~L~~L~l~~n~l~~~l~l 216 (790)
+ .+|.+.|.++++|++|+|++|.+++..+.+|+++++|++|+|++|.++.. .|..++.+++|++|++++|++
T Consensus 113 ~-~l~~~~f~~L~~L~~L~Ls~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l------ 185 (635)
T 4g8a_A 113 Q-SLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKI------ 185 (635)
T ss_dssp C-EECGGGGTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCC------
T ss_pred C-CCCHHHhcCCCCCCEEECCCCcCCCCChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCccc------
Confidence 9 88988889999999999999999998888999999999999999999764 678899999999976666555
Q ss_pred ccccCccccCccccCCCC----CcEEEcccCCCcccCCcchhcCCCCcceEeecCCccccc-CCccccCCCCCCEEeccC
Q 039514 217 GMNNLVGVLPATIFNMST----LKVLILINNSLSGSLPSRIDLSLPTVEVLILALNRFFGT-IPSSITNASKLTVLELGG 291 (790)
Q Consensus 217 ~~n~l~~~~p~~~~~l~~----L~~L~L~~n~l~~~~p~~~~~~l~~L~~L~L~~n~~~~~-~p~~~~~l~~L~~L~l~~ 291 (790)
.+..|..+..+.+ ...++++.|.+.. ++...+ ....++.+++..|..... .+..+..+..++...+..
T Consensus 186 -----~~~~~~~l~~L~~l~~~~~~~~ls~n~l~~-i~~~~~-~~~~~~~l~l~~n~~~~~~~~~~~~~l~~l~~~~l~~ 258 (635)
T 4g8a_A 186 -----QSIYCTDLRVLHQMPLLNLSLDLSLNPMNF-IQPGAF-KEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVL 258 (635)
T ss_dssp -----CEECGGGGHHHHTCTTCCCEEECTTCCCCE-ECTTTT-TTCEEEEEEEESCCSSHHHHHHHHHTTTTCEEEEEEE
T ss_pred -----cccccccccchhhhhhhhhhhhcccCcccc-cCcccc-cchhhhhhhhhcccccccccchhhcCCcccccccccc
Confidence 4456666655443 3478899999874 444333 345667788887765432 345566777777776644
Q ss_pred Ccc------cccCcccccCCCCCccccccCCcccCCCCcccccccCCCCCCCCEEEccCCCCcccCCchhhhhcccCcEE
Q 039514 292 NTF------SGLIPDTIGNLRNLEWLNLSKNSLTSSTSKLSFLSSLANCKKLRSLKLAGNPLDGFLPSSIGNLSKSLETL 365 (790)
Q Consensus 292 n~l------~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~~L~~L 365 (790)
+.. .......+..+..+...++..+........ ....+..+.+++.+.+.++.+....+ +... ..|+.|
T Consensus 259 ~~~~~~~~l~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~--~~~~~~~~~~l~~l~~~~~~~~~~~~--~~~~-~~L~~L 333 (635)
T 4g8a_A 259 GEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDG--IIDLFNCLTNVSSFSLVSVTIERVKD--FSYN-FGWQHL 333 (635)
T ss_dssp ECCTTSCCCSCCCTTTTGGGGGSEEEEEEEECCCSCEEE--CTTTTGGGTTCSEEEEESCEEEECGG--GGSC-CCCSEE
T ss_pred cccccccccccccccccccccchhhhhhhhhhhcccccc--hhhhhhhhcccccccccccccccccc--cccc-hhhhhh
Confidence 322 222333444455555555544433222111 11335566789999999988765432 2222 579999
Q ss_pred EeecCcCcccCchhhhccCCcceeeeccccccCccccccccccccCeEEeeccccCc--cCCccccccccccceecccCc
Q 039514 366 VIANCSISGNIPQAISNLSNLLTLVLERNKLTGPISITFGRLQKLQGLYLASNNLVG--SFPDELCHIGRLAELALLDNR 443 (790)
Q Consensus 366 ~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~--~~~~~~~~l~~L~~L~l~~n~ 443 (790)
++.+|.+....+ ..+..|+.+++..|.+.... ....+++|+.|++++|.+.. ..+..+..+.+|+.+++..+.
T Consensus 334 ~l~~~~~~~~~~---~~l~~L~~l~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~~~~~~ 408 (635)
T 4g8a_A 334 ELVNCKFGQFPT---LKLKSLKRLTFTSNKGGNAF--SEVDLPSLEFLDLSRNGLSFKGCCSQSDFGTISLKYLDLSFNG 408 (635)
T ss_dssp EEESCEESSCCC---CBCTTCCEEEEESCCSCCBC--CCCBCTTCCEEECCSSCCBEEEECCHHHHSCSCCCEEECCSCS
T ss_pred hcccccccCcCc---ccchhhhhcccccccCCCCc--ccccccccccchhhccccccccccccchhhhhhhhhhhccccc
Confidence 999999876544 35678899999999877543 34578999999999998853 455667778899999999998
Q ss_pred ccccCCccccCCCCCCeeeccCCccccccC-cccccCCCCceEeccCCcccccccccccccccCceEeCcCCcc-cccCc
Q 039514 444 HSGSIPSCVSNLTSLRYLYLGSNRFTFVIP-STFWSLKDILFFDFSSNFLVGTLSFDIGNLKVLLGINLSENNL-SGDMP 521 (790)
Q Consensus 444 ~~~~~p~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l-~~~~~ 521 (790)
... .+..+..+++|+.++++.|......+ ..|..+.+++.++++.|.+.+..+..+..++.|+.|++++|++ .+..|
T Consensus 409 ~~~-~~~~~~~l~~L~~l~l~~~~~~~~~~~~~~~~l~~l~~l~ls~n~l~~~~~~~~~~~~~L~~L~Ls~N~~~~~~~~ 487 (635)
T 4g8a_A 409 VIT-MSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLP 487 (635)
T ss_dssp EEE-ECSCCTTCTTCCEEECTTSEEESTTSSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEEC
T ss_pred ccc-ccccccccccccchhhhhccccccccccccccccccccccccccccccccccccccchhhhhhhhhhcccccccCc
Confidence 765 45678889999999999988776544 5688899999999999999999999999999999999999985 45688
Q ss_pred ccccCCcccCeeeCCCCcccccCCccccCCCCCCEEECCCCcCcccCCccccccCCCCeEeCCCCcceecCCCCc-cc-C
Q 039514 522 ATIGGLKDLQFMDLAYNRLEGPIPESFGDLTSLEVLNLSKNKISGSIPKSMEKLFYLRELNLSFNELEGEIPSGG-IF-A 599 (790)
Q Consensus 522 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~-~~-~ 599 (790)
..|..+++|++|+|++|++++.+|..|.++++|++|+|++|+|++..|..|..+++|++|+|++|++++.+|..- .+ .
T Consensus 488 ~~~~~l~~L~~L~Ls~N~L~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~ 567 (635)
T 4g8a_A 488 DIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPS 567 (635)
T ss_dssp SCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCBCCCGGGTTCTTCCEEECTTSCCCBCCSSCTTCCCT
T ss_pred hhhhhccccCEEECCCCccCCcChHHHcCCCCCCEEECCCCcCCCCChhHHhCCCCCCEEECCCCcCCCCCHHHHHhhhC
Confidence 899999999999999999999999999999999999999999999999999999999999999999999887642 22 5
Q ss_pred CCCcccccCCcCCCCCC
Q 039514 600 NFTAESFMGNELLCGLP 616 (790)
Q Consensus 600 ~~~~~~~~~n~~l~~~p 616 (790)
+++.+.+.+||+.|+|.
T Consensus 568 ~L~~L~L~~Np~~C~C~ 584 (635)
T 4g8a_A 568 SLAFLNLTQNDFACTCE 584 (635)
T ss_dssp TCCEEECTTCCBCCSGG
T ss_pred cCCEEEeeCCCCcccCC
Confidence 67788899999999875
No 20
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00 E-value=7.7e-47 Score=430.99 Aligned_cols=469 Identities=20% Similarity=0.230 Sum_probs=372.0
Q ss_pred CcEEEEECCCCCcceeccccCCCCCCCCEEECCCCCCcccCChhhhCCCCCCEEeCCCCCCcccCCccccCCCCCcEEEc
Q 039514 53 HRVTALDTSQFNLQGTIPSQLGNLSSLTILNLSHNKLSGSVPSSIYTMHTLKFLDFTDNQLSGSVSSFVFNMSSIVDIRL 132 (790)
Q Consensus 53 ~~v~~Ldl~~~~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 132 (790)
.+++.||+++|.+++..|.+|..+++|++|+|++|++++..|.+|..+++|++|+|++|++++..+..|.++++|++|++
T Consensus 26 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 105 (549)
T 2z81_A 26 AAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNL 105 (549)
T ss_dssp TTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCSCCHHHHTTCTTCCEEEC
T ss_pred CCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEECCCCccCccCHHHhccCCCCcEEEC
Confidence 57999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCccCcc-cCchhhhccCCCCCEEECCCCc-CcccCCcCCCCCCCCCeeecccCcccccCcccccccCCCCceecccccc
Q 039514 133 TNNRLSG-ELPKNICNYLPHLKALFLDKNM-FHGKIPSALSKCKQLQQLNLQLNNLSGAIPKEIGNLTMLKGISLLYNKL 210 (790)
Q Consensus 133 ~~N~l~~-~lp~~~~~~l~~L~~L~L~~N~-i~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~l 210 (790)
++|.+++ .+|. .+..+++|++|++++|. +....+..|.++++|++|++++|.+++..|..++.+++|++|+++.|.+
T Consensus 106 s~n~l~~~~~~~-~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~~ 184 (549)
T 2z81_A 106 MGNPYQTLGVTS-LFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQSLKSIRDIHHLTLHLSES 184 (549)
T ss_dssp TTCCCSSSCSSC-SCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSBS
T ss_pred CCCcccccchhh-hhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCCcccccChhhhhccccCceEecccCcc
Confidence 9999984 2344 45889999999999999 4545557899999999999999999999999999999999987776654
Q ss_pred cceEEcccccCccccCcc-ccCCCCCcEEEcccCCCcccC--CcchhcCCCCcceEeecCCcccccCC----ccccCCCC
Q 039514 211 QEALVLGMNNLVGVLPAT-IFNMSTLKVLILINNSLSGSL--PSRIDLSLPTVEVLILALNRFFGTIP----SSITNASK 283 (790)
Q Consensus 211 ~~~l~l~~n~l~~~~p~~-~~~l~~L~~L~L~~n~l~~~~--p~~~~~~l~~L~~L~L~~n~~~~~~p----~~~~~l~~ 283 (790)
.. +|.. +..+++|++|++++|.+++.. |.......+.++.|++++|.+.+..+ ..+..+++
T Consensus 185 ~~------------~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~~~~~~~~ 252 (549)
T 2z81_A 185 AF------------LLEIFADILSSVRYLELRDTNLARFQFSPLPVDEVSSPMKKLAFRGSVLTDESFNELLKLLRYILE 252 (549)
T ss_dssp TT------------HHHHHHHSTTTBSEEEEESCBCTTCCCCCCSSCCCCCCCCEEEEESCEEEHHHHHHHHGGGGGCTT
T ss_pred cc------------cchhhHhhcccccEEEccCCccccccccccchhhhhhcccceeccccccchhHHHHHHHHhhhhcc
Confidence 32 3333 356899999999999998632 33344457899999999999877544 34467889
Q ss_pred CCEEeccCCcccccC------cccccCCCCCccccccCCcccCCCCcccccccCCCCCCCCEEEccCCCCcccCCchhhh
Q 039514 284 LTVLELGGNTFSGLI------PDTIGNLRNLEWLNLSKNSLTSSTSKLSFLSSLANCKKLRSLKLAGNPLDGFLPSSIGN 357 (790)
Q Consensus 284 L~~L~l~~n~l~~~~------~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~ 357 (790)
|+.+++++|.+.+.. ...+..+++|+.|++.++.+............+...++|+.|++++|.+. .+|..+..
T Consensus 253 L~~l~l~~~~~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~i~~~~~~~~l~~~~~~~~~L~~L~l~~n~l~-~ip~~~~~ 331 (549)
T 2z81_A 253 LSEVEFDDCTLNGLGDFNPSESDVVSELGKVETVTIRRLHIPQFYLFYDLSTVYSLLEKVKRITVENSKVF-LVPCSFSQ 331 (549)
T ss_dssp CCEEEEESCEEECCSCCCCCTTTCCCCCTTCCEEEEESCBCSCGGGSCCCCHHHHHSTTCCEEEEESSCCC-CCCHHHHH
T ss_pred ccccccccccccccccccccchhhhhhhcccccccccccccchhhhcccchhhhhhcccceEEEeccCccc-cCCHHHHh
Confidence 999999999987642 13456788999999999887653211111111233568999999999987 57777653
Q ss_pred hcccCcEEEeecCcCcccCch---hhhccCCcceeeeccccccCccc--cccccccccCeEEeeccccCccCCccccccc
Q 039514 358 LSKSLETLVIANCSISGNIPQ---AISNLSNLLTLVLERNKLTGPIS--ITFGRLQKLQGLYLASNNLVGSFPDELCHIG 432 (790)
Q Consensus 358 l~~~L~~L~l~~n~l~~~~p~---~~~~l~~L~~L~L~~N~l~~~~~--~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~ 432 (790)
..++|++|++++|.+++..|. .++.+++|++|++++|++++..+ ..+..+++|++|++++|+++ .+|..+..++
T Consensus 332 ~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~ 410 (549)
T 2z81_A 332 HLKSLEFLDLSENLMVEEYLKNSACKGAWPSLQTLVLSQNHLRSMQKTGEILLTLKNLTSLDISRNTFH-PMPDSCQWPE 410 (549)
T ss_dssp HCTTCCEEECCSSCCCHHHHHHHTCTTSSTTCCEEECTTSCCCCHHHHHHHGGGCTTCCEEECTTCCCC-CCCSCCCCCT
T ss_pred cCccccEEEccCCccccccccchhhhhccccCcEEEccCCcccccccchhhhhcCCCCCEEECCCCCCc-cCChhhcccc
Confidence 337899999999999987654 37889999999999999987653 45788899999999999887 4555444444
Q ss_pred cccceecccCcccccCCccccCCCCCCeeeccCCccccccCcccccCCCCceEeccCCcccccccccccccccCceEeCc
Q 039514 433 RLAELALLDNRHSGSIPSCVSNLTSLRYLYLGSNRFTFVIPSTFWSLKDILFFDFSSNFLVGTLSFDIGNLKVLLGINLS 512 (790)
Q Consensus 433 ~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls 512 (790)
+| ++|++++|+++... ..+ .++|++|++++|++++.. ..++.|++|+|+
T Consensus 411 ~L------------------------~~L~Ls~N~l~~l~-~~~--~~~L~~L~Ls~N~l~~~~----~~l~~L~~L~Ls 459 (549)
T 2z81_A 411 KM------------------------RFLNLSSTGIRVVK-TCI--PQTLEVLDVSNNNLDSFS----LFLPRLQELYIS 459 (549)
T ss_dssp TC------------------------CEEECTTSCCSCCC-TTS--CTTCSEEECCSSCCSCCC----CCCTTCCEEECC
T ss_pred cc------------------------cEEECCCCCccccc-chh--cCCceEEECCCCChhhhc----ccCChhcEEECC
Confidence 44 45555555544321 111 145666666666666542 467888889999
Q ss_pred CCcccccCcccccCCcccCeeeCCCCcccccCCccccCCCCCCEEECCCCcCcccCC
Q 039514 513 ENNLSGDMPATIGGLKDLQFMDLAYNRLEGPIPESFGDLTSLEVLNLSKNKISGSIP 569 (790)
Q Consensus 513 ~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p 569 (790)
+|+++ .+|. ...+++|++|+|++|++++.+|..|..+++|+.|++++|++.+..|
T Consensus 460 ~N~l~-~ip~-~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 514 (549)
T 2z81_A 460 RNKLK-TLPD-ASLFPVLLVMKISRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 514 (549)
T ss_dssp SSCCS-SCCC-GGGCTTCCEEECCSSCCCCCCTTGGGGCTTCCEEECCSSCBCCCHH
T ss_pred CCccC-cCCC-cccCccCCEEecCCCccCCcCHHHHhcCcccCEEEecCCCccCCCc
Confidence 99988 4454 4678999999999999999888889999999999999999987665
No 21
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=2.6e-46 Score=437.26 Aligned_cols=467 Identities=19% Similarity=0.202 Sum_probs=289.3
Q ss_pred CCCCEEECCCCCCcccCChhhhCCCCCCEEeC-CCCCCcccCCccccCC----CCCcEEE------------ccCccCcc
Q 039514 77 SSLTILNLSHNKLSGSVPSSIYTMHTLKFLDF-TDNQLSGSVSSFVFNM----SSIVDIR------------LTNNRLSG 139 (790)
Q Consensus 77 ~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L-s~n~l~~~~~~~~~~l----~~L~~L~------------L~~N~l~~ 139 (790)
.+++.|+|++|.+.|.+|.+|+.+++|++|+| ++|.+.|..+-..... ...+... .....+.+
T Consensus 323 ~~V~~L~Ls~~~L~G~ip~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~ 402 (876)
T 4ecn_A 323 GRVTGLSLAGFGAKGRVPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSD 402 (876)
T ss_dssp SCEEEEECTTTCCEEEECGGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCH
T ss_pred CCEEEEECccCCCCCcCchHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhH
Confidence 47899999999999999999999999999999 9998887643221111 0000000 00001110
Q ss_pred cCchhhh----------ccCCCCCEEECCC--CcCcccCCcCCCCCCCCCeeecccCcccc-----------------cC
Q 039514 140 ELPKNIC----------NYLPHLKALFLDK--NMFHGKIPSALSKCKQLQQLNLQLNNLSG-----------------AI 190 (790)
Q Consensus 140 ~lp~~~~----------~~l~~L~~L~L~~--N~i~~~~p~~~~~l~~L~~L~L~~N~l~~-----------------~~ 190 (790)
.++..+. .....++.+.+.. |.+++ +|..|+++++|++|+|++|++++ .+
T Consensus 403 l~~~~l~~~~~~~~i~~~~~l~l~~l~l~~~~N~L~~-IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~i 481 (876)
T 4ecn_A 403 LLQDAINRNPEMKPIKKDSRISLKDTQIGNLTNRITF-ISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYE 481 (876)
T ss_dssp HHHHHHHTCTTSCCCCCCCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHT
T ss_pred HHHHHhhhCccccccccccccchhhceeccccCcccc-hhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccC
Confidence 1100000 1123344444544 77887 78888888888888888888887 38
Q ss_pred ccccc--ccCCCCceecccccccceEEcccccCccccCccccCCCCCcEEEcccCC-Ccc-cCCcchh------cCCCCc
Q 039514 191 PKEIG--NLTMLKGISLLYNKLQEALVLGMNNLVGVLPATIFNMSTLKVLILINNS-LSG-SLPSRID------LSLPTV 260 (790)
Q Consensus 191 ~~~~~--~l~~L~~L~l~~n~l~~~l~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~-l~~-~~p~~~~------~~l~~L 260 (790)
|..++ ++++|++|++ +.|.+.+.+|..+.++++|+.|+|++|. +++ .+|..+. ..+++|
T Consensus 482 P~~l~f~~L~~L~~L~L-----------s~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L 550 (876)
T 4ecn_A 482 NEELSWSNLKDLTDVEL-----------YNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKI 550 (876)
T ss_dssp TSCCCGGGCTTCCEEEE-----------ESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTC
T ss_pred ChhhhhccCCCCCEEEC-----------cCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCc
Confidence 88877 9999988554 4555567789999999999999999998 887 7776543 234578
Q ss_pred ceEeecCCcccccCCc--cccCCCCCCEEeccCCcccccCcccccCCCCCccccccCCcccCCCCcccccccCCCCCC-C
Q 039514 261 EVLILALNRFFGTIPS--SITNASKLTVLELGGNTFSGLIPDTIGNLRNLEWLNLSKNSLTSSTSKLSFLSSLANCKK-L 337 (790)
Q Consensus 261 ~~L~L~~n~~~~~~p~--~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~l~~l~~-L 337 (790)
+.|++++|.+. .+|. .+.++++|+.|++++|.++ .+| .|..+++|+.|+|++|.++.++ ..+..+++ |
T Consensus 551 ~~L~Ls~N~L~-~ip~~~~l~~L~~L~~L~Ls~N~l~-~lp-~~~~L~~L~~L~Ls~N~l~~lp------~~l~~l~~~L 621 (876)
T 4ecn_A 551 QIFYMGYNNLE-EFPASASLQKMVKLGLLDCVHNKVR-HLE-AFGTNVKLTDLKLDYNQIEEIP------EDFCAFTDQV 621 (876)
T ss_dssp CEEECCSSCCC-BCCCHHHHTTCTTCCEEECTTSCCC-BCC-CCCTTSEESEEECCSSCCSCCC------TTSCEECTTC
T ss_pred cEEEeeCCcCC-ccCChhhhhcCCCCCEEECCCCCcc-cch-hhcCCCcceEEECcCCccccch------HHHhhccccC
Confidence 88888888887 6777 7778888888888888887 455 6777888888888888777544 33566666 7
Q ss_pred CEEEccCCCCcccCCchhhhhc-ccCcEEEeecCcCcccCchh---hh--ccCCcceeeeccccccCccccccccccccC
Q 039514 338 RSLKLAGNPLDGFLPSSIGNLS-KSLETLVIANCSISGNIPQA---IS--NLSNLLTLVLERNKLTGPISITFGRLQKLQ 411 (790)
Q Consensus 338 ~~L~Ls~n~l~~~~p~~~~~l~-~~L~~L~l~~n~l~~~~p~~---~~--~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 411 (790)
+.|++++|.+. .+|..+.... ++|+.|++++|.+.+.+|.. +. .+++|+.|++++|.++..+...+..+++|+
T Consensus 622 ~~L~Ls~N~L~-~lp~~~~~~~~~~L~~L~Ls~N~l~g~ip~l~~~l~~~~~~~L~~L~Ls~N~L~~lp~~~~~~l~~L~ 700 (876)
T 4ecn_A 622 EGLGFSHNKLK-YIPNIFNAKSVYVMGSVDFSYNKIGSEGRNISCSMDDYKGINASTVTLSYNEIQKFPTELFATGSPIS 700 (876)
T ss_dssp CEEECCSSCCC-SCCSCCCTTCSSCEEEEECCSSCTTTTSSSCSSCTTTCCCCCEEEEECCSSCCCSCCHHHHHTTCCCS
T ss_pred CEEECcCCCCC-cCchhhhccccCCCCEEECcCCcCCCccccchhhhccccCCCcCEEEccCCcCCccCHHHHccCCCCC
Confidence 77777777777 5565554432 23777777777777655432 22 233667777777777655444445666677
Q ss_pred eEEeeccccCccCCccccccccccceecccCcccccCCccccCCCCCCeeeccCCccccccCcccc--cCCCCceEeccC
Q 039514 412 GLYLASNNLVGSFPDELCHIGRLAELALLDNRHSGSIPSCVSNLTSLRYLYLGSNRFTFVIPSTFW--SLKDILFFDFSS 489 (790)
Q Consensus 412 ~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~--~l~~L~~L~ls~ 489 (790)
.|+|++|.+. .+|..+.... +..+.++++|+.|+|++|+++ .+|..+. .+++|+.|++++
T Consensus 701 ~L~Ls~N~L~-~ip~~~~~~~----------------~~~l~nl~~L~~L~Ls~N~L~-~lp~~l~~~~l~~L~~L~Ls~ 762 (876)
T 4ecn_A 701 TIILSNNLMT-SIPENSLKPK----------------DGNYKNTYLLTTIDLRFNKLT-SLSDDFRATTLPYLSNMDVSY 762 (876)
T ss_dssp EEECCSCCCS-CCCTTSSSCT----------------TSCCTTGGGCCEEECCSSCCC-CCCGGGSTTTCTTCCEEECCS
T ss_pred EEECCCCcCC-ccChHHhccc----------------cccccccCCccEEECCCCCCc-cchHHhhhccCCCcCEEEeCC
Confidence 7777777666 3443322111 000112225555555555555 3344443 455555555555
Q ss_pred CcccccccccccccccCceEeCcC------CcccccCcccccCCcccCeeeCCCCcccccCCccccCCCCCCEEECCCCc
Q 039514 490 NFLVGTLSFDIGNLKVLLGINLSE------NNLSGDMPATIGGLKDLQFMDLAYNRLEGPIPESFGDLTSLEVLNLSKNK 563 (790)
Q Consensus 490 N~l~~~~~~~~~~l~~L~~L~Ls~------N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~ 563 (790)
|.+++ +|..+..+++|+.|+|++ |++.+.+|..|..+++|+.|+|++|++ +.+|..+. ++|+.|+|++|+
T Consensus 763 N~L~~-lp~~l~~L~~L~~L~Ls~N~~ls~N~l~~~ip~~l~~L~~L~~L~Ls~N~L-~~Ip~~l~--~~L~~LdLs~N~ 838 (876)
T 4ecn_A 763 NCFSS-FPTQPLNSSQLKAFGIRHQRDAEGNRILRQWPTGITTCPSLIQLQIGSNDI-RKVDEKLT--PQLYILDIADNP 838 (876)
T ss_dssp SCCSS-CCCGGGGCTTCCEEECCCCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSCCC--SSSCEEECCSCT
T ss_pred CCCCc-cchhhhcCCCCCEEECCCCCCcccccccccChHHHhcCCCCCEEECCCCCC-CccCHhhc--CCCCEEECCCCC
Confidence 55554 344455555555555554 555555566666666666666666666 34454443 456666666665
Q ss_pred CcccCCccccccCCCCeEeCCCCc
Q 039514 564 ISGSIPKSMEKLFYLRELNLSFNE 587 (790)
Q Consensus 564 l~~~~p~~~~~l~~L~~L~Ls~N~ 587 (790)
+....+..+.....+..+.|.+|+
T Consensus 839 l~~i~~~~~~~~~~~~~~~L~~n~ 862 (876)
T 4ecn_A 839 NISIDVTSVCPYIEAGMYVLLYDK 862 (876)
T ss_dssp TCEEECGGGHHHHHTTCCEEECCT
T ss_pred CCccChHHccccccchheeecCCC
Confidence 554444444443344444444443
No 22
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=2.8e-45 Score=414.93 Aligned_cols=459 Identities=22% Similarity=0.229 Sum_probs=343.6
Q ss_pred CEEeCCCCCCcccCCccccCCCCCcEEEccCccCcccCchhhhccCCCCCEEECCCCcCcccCCcCCCCCCCCCeeeccc
Q 039514 104 KFLDFTDNQLSGSVSSFVFNMSSIVDIRLTNNRLSGELPKNICNYLPHLKALFLDKNMFHGKIPSALSKCKQLQQLNLQL 183 (790)
Q Consensus 104 ~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~lp~~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~ 183 (790)
++||+++|+++. +|..+. ++|++|++++|.++ .++...+..+++|++|+|++|.+++..|.+|+++++|++|+|++
T Consensus 3 ~~l~ls~n~l~~-ip~~~~--~~L~~L~Ls~n~i~-~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~ 78 (520)
T 2z7x_B 3 FLVDRSKNGLIH-VPKDLS--QKTTILNISQNYIS-ELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSH 78 (520)
T ss_dssp CEEECTTSCCSS-CCCSCC--TTCSEEECCSSCCC-CCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCS
T ss_pred ceEecCCCCccc-cccccc--ccccEEECCCCccc-ccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCC
Confidence 578999999985 555454 88999999999998 56655568899999999999999988888999999999999999
Q ss_pred CcccccCcccccccCCCCceecccccccceEEcccccCcc-ccCccccCCCCCcEEEcccCCCcccCCcchhcCCCCc--
Q 039514 184 NNLSGAIPKEIGNLTMLKGISLLYNKLQEALVLGMNNLVG-VLPATIFNMSTLKVLILINNSLSGSLPSRIDLSLPTV-- 260 (790)
Q Consensus 184 N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~l~l~~n~l~~-~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~~l~~L-- 260 (790)
|+++. +|.. .+++|++|++++|.+ ++ .+|..+.++++|++|++++|.+++. .+..++.|
T Consensus 79 N~l~~-lp~~--~l~~L~~L~L~~N~l-----------~~~~~p~~~~~l~~L~~L~L~~n~l~~~----~~~~l~~L~L 140 (520)
T 2z7x_B 79 NKLVK-ISCH--PTVNLKHLDLSFNAF-----------DALPICKEFGNMSQLKFLGLSTTHLEKS----SVLPIAHLNI 140 (520)
T ss_dssp SCCCE-EECC--CCCCCSEEECCSSCC-----------SSCCCCGGGGGCTTCCEEEEEESSCCGG----GGGGGTTSCE
T ss_pred Cceee-cCcc--ccCCccEEeccCCcc-----------ccccchhhhccCCcceEEEecCcccchh----hcccccccee
Confidence 99984 5554 788888866655554 33 3677888888899999888887641 12234455
Q ss_pred ceEeecCCcc--cccCCccccCCC-CCCEEeccCCcccccCc-ccccCCCCCccccccCCcccCCCCcccccccCCCCCC
Q 039514 261 EVLILALNRF--FGTIPSSITNAS-KLTVLELGGNTFSGLIP-DTIGNLRNLEWLNLSKNSLTSSTSKLSFLSSLANCKK 336 (790)
Q Consensus 261 ~~L~L~~n~~--~~~~p~~~~~l~-~L~~L~l~~n~l~~~~~-~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~l~~l~~ 336 (790)
+.|++++|.+ .+..|..+..+. +...+++++|.+.+..+ ..+..+++|+.|++++|.-.....
T Consensus 141 ~~L~l~~n~l~~~~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~------------- 207 (520)
T 2z7x_B 141 SKVLLVLGETYGEKEDPEGLQDFNTESLHIVFPTNKEFHFILDVSVKTVANLELSNIKCVLEDNKCS------------- 207 (520)
T ss_dssp EEEEEEECTTTTSSCCTTTTTTCCEEEEEEECCSSSCCCCCCCCCCTTCSEEEECCEEECCSTTTTH-------------
T ss_pred eEEEeecccccccccccccccccccceEEEEeccCcchhhhhhhhhhcccceeeccccccccccccc-------------
Confidence 6666666666 555555554443 22234455555443322 233444444444444443100000
Q ss_pred CCEEEccCCCCcccCCchhhhhcccCcEEEeecCcCcccCchhhh---ccCCcceeeeccccccCcccccc-----cccc
Q 039514 337 LRSLKLAGNPLDGFLPSSIGNLSKSLETLVIANCSISGNIPQAIS---NLSNLLTLVLERNKLTGPISITF-----GRLQ 408 (790)
Q Consensus 337 L~~L~Ls~n~l~~~~p~~~~~l~~~L~~L~l~~n~l~~~~p~~~~---~l~~L~~L~L~~N~l~~~~~~~~-----~~l~ 408 (790)
.+.+.+| .+..+ ++|+.|++++|.+++..+..+. ..++|++|++++|++++..|..+ ..++
T Consensus 208 ---------~~~~~~~-~l~~l-~~L~~L~l~~~~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~~~l~ 276 (520)
T 2z7x_B 208 ---------YFLSILA-KLQTN-PKLSNLTLNNIETTWNSFIRILQLVWHTTVWYFSISNVKLQGQLDFRDFDYSGTSLK 276 (520)
T ss_dssp ---------HHHHHHH-GGGGC-TTCCEEEEEEEEEEHHHHHHHHHHHHTSSCSEEEEEEEEEESCCCCCCCCCCSCCCC
T ss_pred ---------eeecchh-hhccc-cchhhccccccccCHHHHHHHHHHhhhCcccEEEeecccccCccccchhhcccccCc
Confidence 0333333 34444 4677777777776654332221 25699999999999998888777 8999
Q ss_pred ccCeEEeeccccCccCC-cccccc---ccccceecccCcccccCCccccCCCCCCeeeccCCccccccCcccccCCCCce
Q 039514 409 KLQGLYLASNNLVGSFP-DELCHI---GRLAELALLDNRHSGSIPSCVSNLTSLRYLYLGSNRFTFVIPSTFWSLKDILF 484 (790)
Q Consensus 409 ~L~~L~L~~n~l~~~~~-~~~~~l---~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 484 (790)
+|+.+++++|.+ .+| ..+..+ .+|+.|++++|.+.... .+..+++|++|++++|++++..|..+..+++|+.
T Consensus 277 ~L~~l~l~~n~~--~~p~~~~~~~~~~~~L~~L~l~~n~l~~~~--~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~ 352 (520)
T 2z7x_B 277 ALSIHQVVSDVF--GFPQSYIYEIFSNMNIKNFTVSGTRMVHML--CPSKISPFLHLDFSNNLLTDTVFENCGHLTELET 352 (520)
T ss_dssp EEEEEEEEECCC--CSCTHHHHHHHHTCCCSEEEEESSCCCCCC--CCSSCCCCCEEECCSSCCCTTTTTTCCCCSSCCE
T ss_pred eeEeccccccce--ecchhhhhcccccCceeEEEcCCCcccccc--chhhCCcccEEEeECCccChhhhhhhccCCCCCE
Confidence 999999999999 556 455554 67999999999886432 1268899999999999999989999999999999
Q ss_pred EeccCCcccc--cccccccccccCceEeCcCCcccccCc-ccccCCcccCeeeCCCCcccccCCccccCCCCCCEEECCC
Q 039514 485 FDFSSNFLVG--TLSFDIGNLKVLLGINLSENNLSGDMP-ATIGGLKDLQFMDLAYNRLEGPIPESFGDLTSLEVLNLSK 561 (790)
Q Consensus 485 L~ls~N~l~~--~~~~~~~~l~~L~~L~Ls~N~l~~~~~-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 561 (790)
|++++|++++ ..|..+..+++|++|++++|++++.+| ..+..+++|++|++++|++++..|..+. ++|++|++++
T Consensus 353 L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~--~~L~~L~Ls~ 430 (520)
T 2z7x_B 353 LILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFRCLP--PRIKVLDLHS 430 (520)
T ss_dssp EECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCCEEECCSSCCCGGGGGSCC--TTCCEEECCS
T ss_pred EEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCccCCEEECcCCCCCcchhhhhc--ccCCEEECCC
Confidence 9999999997 556778999999999999999998455 4589999999999999999988887765 7999999999
Q ss_pred CcCcccCCccccccCCCCeEeCCCCcceecCCCC--cccCCCCcccccCCcCCCCCC
Q 039514 562 NKISGSIPKSMEKLFYLRELNLSFNELEGEIPSG--GIFANFTAESFMGNELLCGLP 616 (790)
Q Consensus 562 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~--~~~~~~~~~~~~~n~~l~~~p 616 (790)
|+++ .+|..+..+++|++|++++|+++. +|.. ..+..+....+.+|++.|+++
T Consensus 431 N~l~-~ip~~~~~l~~L~~L~L~~N~l~~-l~~~~~~~l~~L~~L~l~~N~~~c~c~ 485 (520)
T 2z7x_B 431 NKIK-SIPKQVVKLEALQELNVASNQLKS-VPDGIFDRLTSLQKIWLHTNPWDCSCP 485 (520)
T ss_dssp SCCC-CCCGGGGGCTTCCEEECCSSCCCC-CCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred Cccc-ccchhhhcCCCCCEEECCCCcCCc-cCHHHhccCCcccEEECcCCCCcccCC
Confidence 9999 788888899999999999999985 5653 345667778888999888765
No 23
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=6.6e-45 Score=415.21 Aligned_cols=462 Identities=19% Similarity=0.172 Sum_probs=318.9
Q ss_pred EEEECCCCCcceeccccCCCCCCCCEEECCCCCCcccCChhhhCCCCCCEEeCCCCCCcccCCccccCCCCCcEEEccCc
Q 039514 56 TALDTSQFNLQGTIPSQLGNLSSLTILNLSHNKLSGSVPSSIYTMHTLKFLDFTDNQLSGSVSSFVFNMSSIVDIRLTNN 135 (790)
Q Consensus 56 ~~Ldl~~~~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N 135 (790)
+.+|++++++++ +|..+. ++|++|+|++|.|++..+.+|..+++|++|+|++|++++..|..|.++++|++|+|++|
T Consensus 34 ~~l~ls~~~L~~-ip~~~~--~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N 110 (562)
T 3a79_B 34 SMVDYSNRNLTH-VPKDLP--PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHN 110 (562)
T ss_dssp CEEECTTSCCCS-CCTTSC--TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTS
T ss_pred cEEEcCCCCCcc-CCCCCC--CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCC
Confidence 689999999996 777775 79999999999999999999999999999999999999999999999999999999999
Q ss_pred cCcccCchhhhccCCCCCEEECCCCcCccc-CCcCCCCCCCCCeeecccCcccccCcccccccCCC--Cceecccccccc
Q 039514 136 RLSGELPKNICNYLPHLKALFLDKNMFHGK-IPSALSKCKQLQQLNLQLNNLSGAIPKEIGNLTML--KGISLLYNKLQE 212 (790)
Q Consensus 136 ~l~~~lp~~~~~~l~~L~~L~L~~N~i~~~-~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L--~~L~l~~n~l~~ 212 (790)
+++ .+|.. .+++|++|+|++|.+++. .|..|+++++|++|++++|+++.. .+..+++| +.|++++|.+.
T Consensus 111 ~l~-~lp~~---~l~~L~~L~Ls~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~~---~~~~l~~L~L~~L~L~~n~l~- 182 (562)
T 3a79_B 111 RLQ-NISCC---PMASLRHLDLSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQL---DLLPVAHLHLSCILLDLVSYH- 182 (562)
T ss_dssp CCC-EECSC---CCTTCSEEECCSSCCSBCCCCGGGGGCTTCCEEEEECSBCCTT---TTGGGTTSCEEEEEEEESSCC-
T ss_pred cCC-ccCcc---ccccCCEEECCCCCccccCchHhhcccCcccEEecCCCccccC---chhhhhhceeeEEEeeccccc-
Confidence 999 88876 699999999999999974 468999999999999999999753 45555555 66554444330
Q ss_pred eEEcccccCccccCccccCCC-CCcEEEcccCCCcccCCcchhcCCCCcceEeecCCcccccCCccccCCCCCCEEeccC
Q 039514 213 ALVLGMNNLVGVLPATIFNMS-TLKVLILINNSLSGSLPSRIDLSLPTVEVLILALNRFFGTIPSSITNASKLTVLELGG 291 (790)
Q Consensus 213 ~l~l~~n~l~~~~p~~~~~l~-~L~~L~L~~n~l~~~~p~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~l~~ 291 (790)
..+..|..+..+. ..-.+++++|.+.+.++..... .+++|+.+++++
T Consensus 183 --------~~~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~------------------------~l~~L~~L~l~~ 230 (562)
T 3a79_B 183 --------IKGGETESLQIPNTTVLHLVFHPNSLFSVQVNMSVN------------------------ALGHLQLSNIKL 230 (562)
T ss_dssp --------CCSSSCCEEEECCEEEEEEEECSSSCCCCCCEEEES------------------------SEEEEEEEEEEC
T ss_pred --------ccccCcccccccCcceEEEEecCccchhhhhhhccc------------------------ccceEEEecccc
Confidence 0455666666654 1124466666665544443333 344455555555
Q ss_pred Cc-----ccccCcccccCCCCCccccccCCcccCCCCcccccccCCCCCCCCEEEccCCCCcccCCchhhhhcccCcEEE
Q 039514 292 NT-----FSGLIPDTIGNLRNLEWLNLSKNSLTSSTSKLSFLSSLANCKKLRSLKLAGNPLDGFLPSSIGNLSKSLETLV 366 (790)
Q Consensus 292 n~-----l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~~L~~L~ 366 (790)
|. +.+. ...|..+++|+.|+++++.+.+. .+.+. +..+. . .+|++|+
T Consensus 231 n~~~~~~l~~~-~~~l~~l~~L~~L~L~~~~l~~~------------------------~~~~~-~~~~~-~-~~L~~L~ 282 (562)
T 3a79_B 231 NDENCQRLMTF-LSELTRGPTLLNVTLQHIETTWK------------------------CSVKL-FQFFW-P-RPVEYLN 282 (562)
T ss_dssp CSTTHHHHHHH-HHHHHSCSSCEEEEEEEEEECHH------------------------HHHHH-HHHHT-T-SSEEEEE
T ss_pred cccccchHHHH-HHHHhccCcceEEEecCCcCcHH------------------------HHHHH-HHhhh-c-ccccEEE
Confidence 43 1111 12344455555555444433221 00000 00010 0 2455555
Q ss_pred eecCcCcccCchhh-----hccCCcceeeeccccccCcccccccc---ccccCeEEeeccccCccCCcccccccccccee
Q 039514 367 IANCSISGNIPQAI-----SNLSNLLTLVLERNKLTGPISITFGR---LQKLQGLYLASNNLVGSFPDELCHIGRLAELA 438 (790)
Q Consensus 367 l~~n~l~~~~p~~~-----~~l~~L~~L~L~~N~l~~~~~~~~~~---l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 438 (790)
+++|.+++.+|..+ ..++.|+.+++..|.+ ..+...+.. ..+|+.|++++|.+.... ....+++|++|+
T Consensus 283 l~~n~l~~~ip~~~~~~~~~~L~~L~~~~~~~~~~-~~p~~~~~~~~~~~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ 359 (562)
T 3a79_B 283 IYNLTITERIDREEFTYSETALKSLMIEHVKNQVF-LFSKEALYSVFAEMNIKMLSISDTPFIHMV--CPPSPSSFTFLN 359 (562)
T ss_dssp EEEEEECSCCCCCCCCCCSCSCCEEEEEEEEECCC-SSCHHHHHHHHHTCCCSEEEEESSCCCCCC--CCSSCCCCCEEE
T ss_pred EeccEeeccccchhhhcccccchheehhhccccee-ecChhhhhhhhccCcceEEEccCCCccccc--CccCCCCceEEE
Confidence 55555554444444 4444444444444444 111111111 145666666666654221 114566677777
Q ss_pred cccCcccccCCccccCCCCCCeeeccCCccccc--cCcccccCCCCceEeccCCcccc-cccccccccccCceEeCcCCc
Q 039514 439 LLDNRHSGSIPSCVSNLTSLRYLYLGSNRFTFV--IPSTFWSLKDILFFDFSSNFLVG-TLSFDIGNLKVLLGINLSENN 515 (790)
Q Consensus 439 l~~n~~~~~~p~~~~~l~~L~~L~L~~N~l~~~--~~~~~~~l~~L~~L~ls~N~l~~-~~~~~~~~l~~L~~L~Ls~N~ 515 (790)
+++|++.+..|..+.++++|++|++++|++++. .|..+..+++|+.|++++|.+++ ..+..+..+++|++|++++|+
T Consensus 360 l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~L~l~~n~ 439 (562)
T 3a79_B 360 FTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNM 439 (562)
T ss_dssp CCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTTCCEEECCSSC
T ss_pred CCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCcccCCEEECCCCC
Confidence 777777766677777777788888888877763 34567777888888888888877 344457788899999999999
Q ss_pred ccccCcccccCCcccCeeeCCCCcccccCCccccCCCCCCEEECCCCcCcccCCcc-ccccCCCCeEeCCCCcceecCCC
Q 039514 516 LSGDMPATIGGLKDLQFMDLAYNRLEGPIPESFGDLTSLEVLNLSKNKISGSIPKS-MEKLFYLRELNLSFNELEGEIPS 594 (790)
Q Consensus 516 l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~-~~~l~~L~~L~Ls~N~l~~~~p~ 594 (790)
+++..|..+. ++|++|+|++|+++ .+|..+..+++|++|+|++|+++. +|.. +..+++|+.|++++|++.|.+|.
T Consensus 440 l~~~~~~~l~--~~L~~L~L~~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~-l~~~~~~~l~~L~~L~l~~N~~~c~c~~ 515 (562)
T 3a79_B 440 LTGSVFRCLP--PKVKVLDLHNNRIM-SIPKDVTHLQALQELNVASNQLKS-VPDGVFDRLTSLQYIWLHDNPWDCTCPG 515 (562)
T ss_dssp CCGGGGSSCC--TTCSEEECCSSCCC-CCCTTTTSSCCCSEEECCSSCCCC-CCTTSTTTCTTCCCEECCSCCBCCCHHH
T ss_pred CCcchhhhhc--CcCCEEECCCCcCc-ccChhhcCCCCCCEEECCCCCCCC-CCHHHHhcCCCCCEEEecCCCcCCCcch
Confidence 9877776554 68999999999998 566666699999999999999995 5554 89999999999999999987775
Q ss_pred C
Q 039514 595 G 595 (790)
Q Consensus 595 ~ 595 (790)
.
T Consensus 516 ~ 516 (562)
T 3a79_B 516 I 516 (562)
T ss_dssp H
T ss_pred H
Confidence 4
No 24
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=6.5e-42 Score=390.51 Aligned_cols=456 Identities=20% Similarity=0.218 Sum_probs=320.4
Q ss_pred CCCEEeCCCCCCcccCCccccCCCCCcEEEccCccCcccCchhhhccCCCCCEEECCCCcCcccCCcCCCCCCCCCeeec
Q 039514 102 TLKFLDFTDNQLSGSVSSFVFNMSSIVDIRLTNNRLSGELPKNICNYLPHLKALFLDKNMFHGKIPSALSKCKQLQQLNL 181 (790)
Q Consensus 102 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~lp~~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~L 181 (790)
..+++|+++|+++. +|..+. ++|++|++++|.++ .+|...|..+++|++|+|++|.+++..|.+|.++++|++|+|
T Consensus 32 ~~~~l~ls~~~L~~-ip~~~~--~~L~~L~Ls~N~i~-~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 107 (562)
T 3a79_B 32 LESMVDYSNRNLTH-VPKDLP--PRTKALSLSQNSIS-ELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDV 107 (562)
T ss_dssp -CCEEECTTSCCCS-CCTTSC--TTCCEEECCSSCCC-CCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEEC
T ss_pred CCcEEEcCCCCCcc-CCCCCC--CCcCEEECCCCCcc-ccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEEC
Confidence 44788888888885 444333 67888888888887 566555577888888888888888777888888888888888
Q ss_pred ccCcccccCcccccccCCCCceecccccccceEEcccccCccccCccccCCCCCcEEEcccCCCcccCCcchhcCCCCcc
Q 039514 182 QLNNLSGAIPKEIGNLTMLKGISLLYNKLQEALVLGMNNLVGVLPATIFNMSTLKVLILINNSLSGSLPSRIDLSLPTVE 261 (790)
Q Consensus 182 ~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~l~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~~l~~L~ 261 (790)
++|+++. +|.. .+++|++|++++|++... ..|..|.++++|++|++++|.+++.. +..++.+
T Consensus 108 s~N~l~~-lp~~--~l~~L~~L~Ls~N~l~~l----------~~p~~~~~l~~L~~L~L~~n~l~~~~----~~~l~~L- 169 (562)
T 3a79_B 108 SHNRLQN-ISCC--PMASLRHLDLSFNDFDVL----------PVCKEFGNLTKLTFLGLSAAKFRQLD----LLPVAHL- 169 (562)
T ss_dssp TTSCCCE-ECSC--CCTTCSEEECCSSCCSBC----------CCCGGGGGCTTCCEEEEECSBCCTTT----TGGGTTS-
T ss_pred CCCcCCc-cCcc--ccccCCEEECCCCCcccc----------CchHhhcccCcccEEecCCCccccCc----hhhhhhc-
Confidence 8888874 4444 677777766555554320 23567777777777777777765311 1112222
Q ss_pred eEeecCCcccccCCccccCCCCCCEEeccCCcc--cccCcccccCCC--CCccccccCCcccCCCCcccccccCCCCCCC
Q 039514 262 VLILALNRFFGTIPSSITNASKLTVLELGGNTF--SGLIPDTIGNLR--NLEWLNLSKNSLTSSTSKLSFLSSLANCKKL 337 (790)
Q Consensus 262 ~L~L~~n~~~~~~p~~~~~l~~L~~L~l~~n~l--~~~~~~~~~~l~--~L~~L~Ls~n~l~~~~~~~~~~~~l~~l~~L 337 (790)
+|+.|++++|.+ ++..|..|..+. .+ .+++++|.+...... ..+..+++|
T Consensus 170 ---------------------~L~~L~L~~n~l~~~~~~~~~l~~l~~~~l-~l~l~~n~~~~~~~~----~~~~~l~~L 223 (562)
T 3a79_B 170 ---------------------HLSCILLDLVSYHIKGGETESLQIPNTTVL-HLVFHPNSLFSVQVN----MSVNALGHL 223 (562)
T ss_dssp ---------------------CEEEEEEEESSCCCCSSSCCEEEECCEEEE-EEEECSSSCCCCCCE----EEESSEEEE
T ss_pred ---------------------eeeEEEeecccccccccCcccccccCcceE-EEEecCccchhhhhh----hcccccceE
Confidence 124444444444 444444444332 11 234444444432111 123445566
Q ss_pred CEEEccCCCC-----cccCCchhhhhcccCcEEEeecCcCcccC----chhhhccCCcceeeeccccccCcccccc----
Q 039514 338 RSLKLAGNPL-----DGFLPSSIGNLSKSLETLVIANCSISGNI----PQAISNLSNLLTLVLERNKLTGPISITF---- 404 (790)
Q Consensus 338 ~~L~Ls~n~l-----~~~~p~~~~~l~~~L~~L~l~~n~l~~~~----p~~~~~l~~L~~L~L~~N~l~~~~~~~~---- 404 (790)
+.+++++|.. .+. ...+..+ +.|+.|++.++.+.+.. +.. ...++|++|++++|.+++..|..+
T Consensus 224 ~~L~l~~n~~~~~~l~~~-~~~l~~l-~~L~~L~L~~~~l~~~~~~~~~~~-~~~~~L~~L~l~~n~l~~~ip~~~~~~~ 300 (562)
T 3a79_B 224 QLSNIKLNDENCQRLMTF-LSELTRG-PTLLNVTLQHIETTWKCSVKLFQF-FWPRPVEYLNIYNLTITERIDREEFTYS 300 (562)
T ss_dssp EEEEEECCSTTHHHHHHH-HHHHHSC-SSCEEEEEEEEEECHHHHHHHHHH-HTTSSEEEEEEEEEEECSCCCCCCCCCC
T ss_pred EEecccccccccchHHHH-HHHHhcc-CcceEEEecCCcCcHHHHHHHHHh-hhcccccEEEEeccEeeccccchhhhcc
Confidence 6666666642 111 1223333 46777777776665421 222 234599999999999998777766
Q ss_pred -ccccccCeEEeeccccCccCC-cccccc---ccccceecccCcccccCCccccCCCCCCeeeccCCccccccCcccccC
Q 039514 405 -GRLQKLQGLYLASNNLVGSFP-DELCHI---GRLAELALLDNRHSGSIPSCVSNLTSLRYLYLGSNRFTFVIPSTFWSL 479 (790)
Q Consensus 405 -~~l~~L~~L~L~~n~l~~~~~-~~~~~l---~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l 479 (790)
..++.|+.++++.|.+ .+| ..+..+ .+|+.|++++|.+.... ....+++|++|++++|++++..|..+..+
T Consensus 301 ~~~L~~L~~~~~~~~~~--~~p~~~~~~~~~~~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~l~~n~l~~~~~~~~~~l 376 (562)
T 3a79_B 301 ETALKSLMIEHVKNQVF--LFSKEALYSVFAEMNIKMLSISDTPFIHMV--CPPSPSSFTFLNFTQNVFTDSVFQGCSTL 376 (562)
T ss_dssp SCSCCEEEEEEEEECCC--SSCHHHHHHHHHTCCCSEEEEESSCCCCCC--CCSSCCCCCEEECCSSCCCTTTTTTCCSC
T ss_pred cccchheehhhccccee--ecChhhhhhhhccCcceEEEccCCCccccc--CccCCCCceEEECCCCccccchhhhhccc
Confidence 6777777777777777 445 233222 57999999999875432 22678999999999999999999999999
Q ss_pred CCCceEeccCCccccc--ccccccccccCceEeCcCCcccc-cCcccccCCcccCeeeCCCCcccccCCccccCCCCCCE
Q 039514 480 KDILFFDFSSNFLVGT--LSFDIGNLKVLLGINLSENNLSG-DMPATIGGLKDLQFMDLAYNRLEGPIPESFGDLTSLEV 556 (790)
Q Consensus 480 ~~L~~L~ls~N~l~~~--~~~~~~~l~~L~~L~Ls~N~l~~-~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 556 (790)
++|+.|++++|++++. .|..+..+++|++|++++|++++ ..+..+..+++|++|++++|++++..|..+. ++|++
T Consensus 377 ~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~--~~L~~ 454 (562)
T 3a79_B 377 KRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSVFRCLP--PKVKV 454 (562)
T ss_dssp SSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTTCCEEECCSSCCCGGGGSSCC--TTCSE
T ss_pred CCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCcccCCEEECCCCCCCcchhhhhc--CcCCE
Confidence 9999999999999974 45678999999999999999998 4455689999999999999999987777654 79999
Q ss_pred EECCCCcCcccCCccccccCCCCeEeCCCCcceecCCCC--cccCCCCcccccCCcCCCCCC
Q 039514 557 LNLSKNKISGSIPKSMEKLFYLRELNLSFNELEGEIPSG--GIFANFTAESFMGNELLCGLP 616 (790)
Q Consensus 557 L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~--~~~~~~~~~~~~~n~~l~~~p 616 (790)
|+|++|+++ .+|..+..+++|++|++++|+++. +|.. ..+..+....+.+|++.|+++
T Consensus 455 L~L~~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~-l~~~~~~~l~~L~~L~l~~N~~~c~c~ 514 (562)
T 3a79_B 455 LDLHNNRIM-SIPKDVTHLQALQELNVASNQLKS-VPDGVFDRLTSLQYIWLHDNPWDCTCP 514 (562)
T ss_dssp EECCSSCCC-CCCTTTTSSCCCSEEECCSSCCCC-CCTTSTTTCTTCCCEECCSCCBCCCHH
T ss_pred EECCCCcCc-ccChhhcCCCCCCEEECCCCCCCC-CCHHHHhcCCCCCEEEecCCCcCCCcc
Confidence 999999999 677777799999999999999995 5543 455667778889999988765
No 25
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=1.1e-41 Score=357.52 Aligned_cols=294 Identities=31% Similarity=0.517 Sum_probs=266.7
Q ss_pred CCCCHHHHHHHHHHHhhcCCCCCccccCCCCCCCCCCC--ccccccCCCC--CcEEEEECCCCCcce--eccccCCCCCC
Q 039514 5 SSNITTDQQALLALKDHIISDPTNLLAHNWTSNASVCT--WIGITCDVNS--HRVTALDTSQFNLQG--TIPSQLGNLSS 78 (790)
Q Consensus 5 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~w~~~~~~c~--w~gv~c~~~~--~~v~~Ldl~~~~l~~--~~~~~~~~l~~ 78 (790)
+.+.++|++||++||+++ .||. .+.+ |..+.+||. |.||.|+... ++|+.||++++.+++ .+|+.|..+++
T Consensus 1 ~~c~~~~~~aL~~~k~~~-~~~~-~l~~-W~~~~~~C~~~w~gv~C~~~~~~~~l~~L~L~~~~l~~~~~~~~~l~~l~~ 77 (313)
T 1ogq_A 1 ELCNPQDKQALLQIKKDL-GNPT-TLSS-WLPTTDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPSSLANLPY 77 (313)
T ss_dssp CCSCHHHHHHHHHHHHHT-TCCG-GGTT-CCTTSCTTTTCSTTEEECCSSSCCCEEEEEEECCCCSSCEECCGGGGGCTT
T ss_pred CCCCHHHHHHHHHHHHhc-CCcc-cccC-CCCCCCCCcCCCcceEeCCCCCCceEEEEECCCCCccCCcccChhHhCCCC
Confidence 357889999999999999 5765 5666 988889998 9999998654 799999999999999 99999999999
Q ss_pred CCEEECCC-CCCcccCChhhhCCCCCCEEeCCCCCCcccCCccccCCCCCcEEEccCccCcccCchhhhccCCCCCEEEC
Q 039514 79 LTILNLSH-NKLSGSVPSSIYTMHTLKFLDFTDNQLSGSVSSFVFNMSSIVDIRLTNNRLSGELPKNICNYLPHLKALFL 157 (790)
Q Consensus 79 L~~L~Ls~-N~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~lp~~~~~~l~~L~~L~L 157 (790)
|++|+|++ |.+.+..|..|..+++|++|+|++|++++..|..|.++++|++|++++|.+++.+|..+ ..+++|++|+|
T Consensus 78 L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~-~~l~~L~~L~L 156 (313)
T 1ogq_A 78 LNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSI-SSLPNLVGITF 156 (313)
T ss_dssp CSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGG-GGCTTCCEEEC
T ss_pred CCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCccCCcCChHH-hcCCCCCeEEC
Confidence 99999995 99999999999999999999999999999999999999999999999999998888876 77999999999
Q ss_pred CCCcCcccCCcCCCCCC-CCCeeecccCcccccCcccccccCCCCceecccccccceEEcccccCccccCccccCCCCCc
Q 039514 158 DKNMFHGKIPSALSKCK-QLQQLNLQLNNLSGAIPKEIGNLTMLKGISLLYNKLQEALVLGMNNLVGVLPATIFNMSTLK 236 (790)
Q Consensus 158 ~~N~i~~~~p~~~~~l~-~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~l~l~~n~l~~~~p~~~~~l~~L~ 236 (790)
++|.+++.+|..+..++ +|++|++++|++++.+|..+..++ |+.|++++ |.+.+..|..+..+++|+
T Consensus 157 ~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~-----------N~l~~~~~~~~~~l~~L~ 224 (313)
T 1ogq_A 157 DGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSR-----------NMLEGDASVLFGSDKNTQ 224 (313)
T ss_dssp CSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-CSEEECCS-----------SEEEECCGGGCCTTSCCS
T ss_pred cCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc-ccEEECcC-----------CcccCcCCHHHhcCCCCC
Confidence 99999999999999998 999999999999999999999987 88855554 455567888999999999
Q ss_pred EEEcccCCCcccCCcchhcCCCCcceEeecCCcccccCCccccCCCCCCEEeccCCcccccCcccccCCCCCccccccCC
Q 039514 237 VLILINNSLSGSLPSRIDLSLPTVEVLILALNRFFGTIPSSITNASKLTVLELGGNTFSGLIPDTIGNLRNLEWLNLSKN 316 (790)
Q Consensus 237 ~L~L~~n~l~~~~p~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n 316 (790)
.|++++|.+++.+|. ...+++|+.|++++|.+.+.+|..+..+++|++|++++|.+++.+|.. ..+++|+.+++++|
T Consensus 225 ~L~L~~N~l~~~~~~--~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~-~~l~~L~~l~l~~N 301 (313)
T 1ogq_A 225 KIHLAKNSLAFDLGK--VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQG-GNLQRFDVSAYANN 301 (313)
T ss_dssp EEECCSSEECCBGGG--CCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCS-TTGGGSCGGGTCSS
T ss_pred EEECCCCceeeecCc--ccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccccCCCC-ccccccChHHhcCC
Confidence 999999999876665 346899999999999999999999999999999999999999888875 88899999999998
Q ss_pred c
Q 039514 317 S 317 (790)
Q Consensus 317 ~ 317 (790)
.
T Consensus 302 ~ 302 (313)
T 1ogq_A 302 K 302 (313)
T ss_dssp S
T ss_pred C
Confidence 7
No 26
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=3.4e-39 Score=358.82 Aligned_cols=388 Identities=19% Similarity=0.208 Sum_probs=257.4
Q ss_pred CCEEECCCCcCcccCCcCCCCCCCCCeeecccCcccccCcccccccCCCCceecccccccceEEcccccCccccCccccC
Q 039514 152 LKALFLDKNMFHGKIPSALSKCKQLQQLNLQLNNLSGAIPKEIGNLTMLKGISLLYNKLQEALVLGMNNLVGVLPATIFN 231 (790)
Q Consensus 152 L~~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~l~l~~n~l~~~~p~~~~~ 231 (790)
-+.++.+++.++. +|. + .++|++|+|++|.+++..|..|+++++|++|++++|.+.. .+.|..|.+
T Consensus 12 ~~~~~c~~~~l~~-lp~-l--~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~----------~i~~~~~~~ 77 (455)
T 3v47_A 12 GYNAICINRGLHQ-VPE-L--PAHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGL----------VIRNNTFRG 77 (455)
T ss_dssp TTEEECCSSCCSS-CCC-C--CTTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTC----------EECTTTTTT
T ss_pred ccccCcCCCCccc-CCC-C--CCccCEEEecCCccCcCChhHhccCccccEEECcCCcccc----------eECcccccc
Confidence 3467777777763 444 2 2678888888888887777778877777776665554431 123455666
Q ss_pred CCCCcEEEcccCCCcccCCcchhcCCCCcceEeecCCcccccCCcc--ccCCCCCCEEeccCCcccccCcccccCCCCCc
Q 039514 232 MSTLKVLILINNSLSGSLPSRIDLSLPTVEVLILALNRFFGTIPSS--ITNASKLTVLELGGNTFSGLIPDTIGNLRNLE 309 (790)
Q Consensus 232 l~~L~~L~L~~n~l~~~~p~~~~~~l~~L~~L~L~~n~~~~~~p~~--~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~ 309 (790)
+++|++|++++|.+++..|..+. .+++|++|++++|.+.+..|.. +..+++|++|++++|.+++..|..
T Consensus 78 l~~L~~L~Ls~n~l~~~~~~~~~-~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~-------- 148 (455)
T 3v47_A 78 LSSLIILKLDYNQFLQLETGAFN-GLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPAS-------- 148 (455)
T ss_dssp CTTCCEEECTTCTTCEECTTTTT-TCTTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCG--------
T ss_pred cccCCEEeCCCCccCccChhhcc-CcccCCEEeCCCCCCCccccCcccccCcccCCEEECCCCccCccCccc--------
Confidence 67777777776666533333322 3444444444444444432222 444444444444444444443333
Q ss_pred cccccCCcccCCCCcccccccCCCCCCCCEEEccCCCCcccCCchhhhhc-ccCcEEEeecCcCcccCchh--------h
Q 039514 310 WLNLSKNSLTSSTSKLSFLSSLANCKKLRSLKLAGNPLDGFLPSSIGNLS-KSLETLVIANCSISGNIPQA--------I 380 (790)
Q Consensus 310 ~L~Ls~n~l~~~~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~-~~L~~L~l~~n~l~~~~p~~--------~ 380 (790)
.+..+++|++|++++|.+.+..|..+..+. ..|+.|++++|.+.+..+.. +
T Consensus 149 --------------------~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~~ 208 (455)
T 3v47_A 149 --------------------FFLNMRRFHVLDLTFNKVKSICEEDLLNFQGKHFTLLRLSSITLQDMNEYWLGWEKCGNP 208 (455)
T ss_dssp --------------------GGGGCTTCCEEECTTCCBSCCCTTTSGGGTTCEEEEEECTTCBCTTCSTTCTTHHHHCCT
T ss_pred --------------------ccCCCCcccEEeCCCCcccccChhhhhccccccccccccccCcccccchhhccccccccc
Confidence 133444444445544444444444333321 24555555555555433322 2
Q ss_pred hccCCcceeeeccccccCccccccccc---cccCeEEeeccccCccCCccccccccccceecccCcccccCCcccc--CC
Q 039514 381 SNLSNLLTLVLERNKLTGPISITFGRL---QKLQGLYLASNNLVGSFPDELCHIGRLAELALLDNRHSGSIPSCVS--NL 455 (790)
Q Consensus 381 ~~l~~L~~L~L~~N~l~~~~~~~~~~l---~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~p~~~~--~l 455 (790)
..+++|++|++++|.+++..+..+... ++|+.|++++|.+.+.... .+.+....+..+. ..
T Consensus 209 ~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~ 274 (455)
T 3v47_A 209 FKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYNMGSSFG--------------HTNFKDPDNFTFKGLEA 274 (455)
T ss_dssp TTTCEEEEEECTTSCCCHHHHHHHHHHTTTCCEEEEECTTCTTTSCCTT--------------CCSSCCCCTTTTGGGTT
T ss_pred cccceeeeEecCCCcccccchhhhhccccccceeeEeeccccccccccc--------------hhhhccCcccccccccc
Confidence 234566666666666665554444332 5666666666655432110 1111111112222 23
Q ss_pred CCCCeeeccCCccccccCcccccCCCCceEeccCCcccccccccccccccCceEeCcCCcccccCcccccCCcccCeeeC
Q 039514 456 TSLRYLYLGSNRFTFVIPSTFWSLKDILFFDFSSNFLVGTLSFDIGNLKVLLGINLSENNLSGDMPATIGGLKDLQFMDL 535 (790)
Q Consensus 456 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 535 (790)
++|++|++++|.+++..|..+..+++|+.|++++|.+++..+..+..+++|++|+|++|++++..|..|.++++|++|+|
T Consensus 275 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 354 (455)
T 3v47_A 275 SGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDL 354 (455)
T ss_dssp SCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEEC
T ss_pred cCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccCCEEEC
Confidence 68999999999999988999999999999999999999888889999999999999999999999999999999999999
Q ss_pred CCCcccccCCccccCCCCCCEEECCCCcCcccCCccccccCCCCeEeCCCCcceecCCCCc
Q 039514 536 AYNRLEGPIPESFGDLTSLEVLNLSKNKISGSIPKSMEKLFYLRELNLSFNELEGEIPSGG 596 (790)
Q Consensus 536 s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 596 (790)
++|++++..|..|.++++|++|+|++|++++..+..|..+++|++|++++|++++.+|...
T Consensus 355 s~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~ 415 (455)
T 3v47_A 355 SYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRID 415 (455)
T ss_dssp CSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTTTH
T ss_pred CCCcccccChhhccccccccEEECCCCccccCCHhHhccCCcccEEEccCCCcccCCCcch
Confidence 9999999999999999999999999999998777788999999999999999999998654
No 27
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=2.9e-39 Score=359.33 Aligned_cols=380 Identities=19% Similarity=0.199 Sum_probs=232.1
Q ss_pred CCCCcceeccccCCCCCCCCEEECCCCCCcccCChhhhCCCCCCEEeCCCCCCcc-cCCccccCCCCCcEEEccCccCcc
Q 039514 61 SQFNLQGTIPSQLGNLSSLTILNLSHNKLSGSVPSSIYTMHTLKFLDFTDNQLSG-SVSSFVFNMSSIVDIRLTNNRLSG 139 (790)
Q Consensus 61 ~~~~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~n~l~~-~~~~~~~~l~~L~~L~L~~N~l~~ 139 (790)
++++++ .+|. +. ++|++|+|++|.|++..|..|..+++|++|+|++|.+.+ ..+..|.++++|++|+|++|.+++
T Consensus 18 ~~~~l~-~lp~-l~--~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~n~l~~ 93 (455)
T 3v47_A 18 INRGLH-QVPE-LP--AHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYNQFLQ 93 (455)
T ss_dssp CSSCCS-SCCC-CC--TTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTTCTTCE
T ss_pred CCCCcc-cCCC-CC--CccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEeCCCCccCc
Confidence 334444 3455 33 689999999999999889999999999999999999874 446778888888888888888884
Q ss_pred cCchhhhccCCCCCEEECCCCcCcccCCcC--CCCCCCCCeeecccCcccccCccc-ccccCCCCceecccccccceEEc
Q 039514 140 ELPKNICNYLPHLKALFLDKNMFHGKIPSA--LSKCKQLQQLNLQLNNLSGAIPKE-IGNLTMLKGISLLYNKLQEALVL 216 (790)
Q Consensus 140 ~lp~~~~~~l~~L~~L~L~~N~i~~~~p~~--~~~l~~L~~L~L~~N~l~~~~~~~-~~~l~~L~~L~l~~n~l~~~l~l 216 (790)
..|.. +..+++|++|+|++|.+++..|.. |..+++|++|+|++|.+++..|.. +.++++|++|++++|.+
T Consensus 94 ~~~~~-~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l------ 166 (455)
T 3v47_A 94 LETGA-FNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKV------ 166 (455)
T ss_dssp ECTTT-TTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCCB------
T ss_pred cChhh-ccCcccCCEEeCCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCCcc------
Confidence 44544 477888888888888888754444 888888888888888888776765 77788887755555443
Q ss_pred ccccCccccCccccCC--CCCcEEEcccCCCcccCCcchhcCCCCcceEeecCCcccccCCccccCCCCCCEEeccCCcc
Q 039514 217 GMNNLVGVLPATIFNM--STLKVLILINNSLSGSLPSRIDLSLPTVEVLILALNRFFGTIPSSITNASKLTVLELGGNTF 294 (790)
Q Consensus 217 ~~n~l~~~~p~~~~~l--~~L~~L~L~~n~l~~~~p~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~l~~n~l 294 (790)
.+..|..+..+ .+|+.|++++|.+.+..+..+. ......+..+++|++|++++|.+
T Consensus 167 -----~~~~~~~l~~l~~~~L~~L~l~~n~l~~~~~~~~~-----------------~~~~~~~~~~~~L~~L~Ls~n~l 224 (455)
T 3v47_A 167 -----KSICEEDLLNFQGKHFTLLRLSSITLQDMNEYWLG-----------------WEKCGNPFKNTSITTLDLSGNGF 224 (455)
T ss_dssp -----SCCCTTTSGGGTTCEEEEEECTTCBCTTCSTTCTT-----------------HHHHCCTTTTCEEEEEECTTSCC
T ss_pred -----cccChhhhhccccccccccccccCcccccchhhcc-----------------ccccccccccceeeeEecCCCcc
Confidence 34555555554 5667777777766532211110 00111233456777778887777
Q ss_pred cccCcccccCC---CCCccccccCCcccCCCCcccccccCCCCCCCCEEEccCCCCcccCCchhhhh-cccCcEEEeecC
Q 039514 295 SGLIPDTIGNL---RNLEWLNLSKNSLTSSTSKLSFLSSLANCKKLRSLKLAGNPLDGFLPSSIGNL-SKSLETLVIANC 370 (790)
Q Consensus 295 ~~~~~~~~~~l---~~L~~L~Ls~n~l~~~~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l-~~~L~~L~l~~n 370 (790)
++..|..+... ++|+.|++++|.+...... .+.+.+..+..+..+ .++|++|++++|
T Consensus 225 ~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~L~~L~l~~n 285 (455)
T 3v47_A 225 KESMAKRFFDAIAGTKIQSLILSNSYNMGSSFG-------------------HTNFKDPDNFTFKGLEASGVKTCDLSKS 285 (455)
T ss_dssp CHHHHHHHHHHTTTCCEEEEECTTCTTTSCCTT-------------------CCSSCCCCTTTTGGGTTSCCCEEECCSS
T ss_pred cccchhhhhccccccceeeEeeccccccccccc-------------------hhhhccCcccccccccccCceEEEecCc
Confidence 77666665543 6677777776655432110 011111111111111 135666666666
Q ss_pred cCcccCchhhhccCCcceeeeccccccCccccccccccccCeEEeeccccCccCCccccccccccceecccCcccccCCc
Q 039514 371 SISGNIPQAISNLSNLLTLVLERNKLTGPISITFGRLQKLQGLYLASNNLVGSFPDELCHIGRLAELALLDNRHSGSIPS 450 (790)
Q Consensus 371 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~p~ 450 (790)
.+.+..|..+..+++|++|++++|.+++..+..|..+++|++|++++|.+.+..|..+..+++|+.|++++|++.+..|.
T Consensus 286 ~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~ 365 (455)
T 3v47_A 286 KIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRALGDQ 365 (455)
T ss_dssp CCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEECCSSCCCEECTT
T ss_pred cccccchhhcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccCCEEECCCCcccccChh
Confidence 66666666666666666666666666665555666666666666666666554444444444444444444444444444
Q ss_pred cccCCCCCCeeeccCCccccccCcccccCCCCceEeccCCcc
Q 039514 451 CVSNLTSLRYLYLGSNRFTFVIPSTFWSLKDILFFDFSSNFL 492 (790)
Q Consensus 451 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l 492 (790)
.+..+++|++|++++|++++.++..+..+++|+.|++++|.+
T Consensus 366 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l 407 (455)
T 3v47_A 366 SFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPW 407 (455)
T ss_dssp TTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCB
T ss_pred hccccccccEEECCCCccccCCHhHhccCCcccEEEccCCCc
Confidence 444444444444444444443333333333333333333333
No 28
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=100.00 E-value=1.5e-39 Score=358.19 Aligned_cols=390 Identities=25% Similarity=0.285 Sum_probs=166.3
Q ss_pred CCCCCEEECCCCCCcccCChhhhCCCCCCEEeCCCCCCcccCCccccCCCCC-------------cEEEccCccCcccCc
Q 039514 76 LSSLTILNLSHNKLSGSVPSSIYTMHTLKFLDFTDNQLSGSVSSFVFNMSSI-------------VDIRLTNNRLSGELP 142 (790)
Q Consensus 76 l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L-------------~~L~L~~N~l~~~lp 142 (790)
.++|++|++++|.+ +.+|.+|+.+++|++|++++|++.+..|..++++++| ++|++++|.++ .+|
T Consensus 10 ~~~L~~L~l~~n~l-~~iP~~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~~~l~~L~l~~~~l~-~lp 87 (454)
T 1jl5_A 10 NTFLQEPLRHSSNL-TEMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLDRQAHELELNNLGLS-SLP 87 (454)
T ss_dssp -------------------------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHHHTCSEEECTTSCCS-CCC
T ss_pred cccchhhhcccCch-hhCChhHhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhccCCCEEEecCCccc-cCC
Confidence 46777777777777 5677777777777777777777777777777777665 55555555555 344
Q ss_pred hhhhccCCCCCEEECCCCcCcccCCcCCCCCCCCCeeecccCcccccCcccccccCCCCceecccccccceEEcccccCc
Q 039514 143 KNICNYLPHLKALFLDKNMFHGKIPSALSKCKQLQQLNLQLNNLSGAIPKEIGNLTMLKGISLLYNKLQEALVLGMNNLV 222 (790)
Q Consensus 143 ~~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~l~l~~n~l~ 222 (790)
. ..++|++|++++|.+++ +|.. +++|++|++++|++++. |.. .++|++|++++|.+ +
T Consensus 88 ~----~~~~L~~L~l~~n~l~~-lp~~---~~~L~~L~l~~n~l~~l-~~~---~~~L~~L~L~~n~l-----------~ 144 (454)
T 1jl5_A 88 E----LPPHLESLVASCNSLTE-LPEL---PQSLKSLLVDNNNLKAL-SDL---PPLLEYLGVSNNQL-----------E 144 (454)
T ss_dssp S----CCTTCSEEECCSSCCSS-CCCC---CTTCCEEECCSSCCSCC-CSC---CTTCCEEECCSSCC-----------S
T ss_pred C----CcCCCCEEEccCCcCCc-cccc---cCCCcEEECCCCccCcc-cCC---CCCCCEEECcCCCC-----------C
Confidence 3 13455555555555554 3332 24555555555555431 110 02333322222222 2
Q ss_pred cccCccccCCCCCcEEEcccCCCcccCCcchhcCCCCcceEeecCCcccccCCccccCCCCCCEEeccCCcccccCcccc
Q 039514 223 GVLPATIFNMSTLKVLILINNSLSGSLPSRIDLSLPTVEVLILALNRFFGTIPSSITNASKLTVLELGGNTFSGLIPDTI 302 (790)
Q Consensus 223 ~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~ 302 (790)
+ +| .+.++++|++|++++|.++ + +|.. ..+|++|++++|.+++. | .|
T Consensus 145 ~-lp-~~~~l~~L~~L~l~~N~l~-------------------------~-lp~~---~~~L~~L~L~~n~l~~l-~-~~ 191 (454)
T 1jl5_A 145 K-LP-ELQNSSFLKIIDVDNNSLK-------------------------K-LPDL---PPSLEFIAAGNNQLEEL-P-EL 191 (454)
T ss_dssp S-CC-CCTTCTTCCEEECCSSCCS-------------------------C-CCCC---CTTCCEEECCSSCCSSC-C-CC
T ss_pred C-Cc-ccCCCCCCCEEECCCCcCc-------------------------c-cCCC---cccccEEECcCCcCCcC-c-cc
Confidence 1 22 2344444444444444433 2 2211 12555555555555542 3 35
Q ss_pred cCCCCCccccccCCcccCCCCcccccccCCCCCCCCEEEccCCCCcccCCchhhhhcccCcEEEeecCcCcccCchhhhc
Q 039514 303 GNLRNLEWLNLSKNSLTSSTSKLSFLSSLANCKKLRSLKLAGNPLDGFLPSSIGNLSKSLETLVIANCSISGNIPQAISN 382 (790)
Q Consensus 303 ~~l~~L~~L~Ls~n~l~~~~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~~L~~L~l~~n~l~~~~p~~~~~ 382 (790)
..+++|++|++++|.+++++.. .++ |++|++++|.++ .+| .++.
T Consensus 192 ~~l~~L~~L~l~~N~l~~l~~~---------~~~-------------------------L~~L~l~~n~l~-~lp-~~~~ 235 (454)
T 1jl5_A 192 QNLPFLTAIYADNNSLKKLPDL---------PLS-------------------------LESIVAGNNILE-ELP-ELQN 235 (454)
T ss_dssp TTCTTCCEEECCSSCCSSCCCC---------CTT-------------------------CCEEECCSSCCS-SCC-CCTT
T ss_pred cCCCCCCEEECCCCcCCcCCCC---------cCc-------------------------ccEEECcCCcCC-ccc-ccCC
Confidence 5555555555555555443210 123 444444444444 233 2444
Q ss_pred cCCcceeeeccccccCccccccccccccCeEEeeccccCccCCccccccccccceecccCcccccCCccccCCCCCCeee
Q 039514 383 LSNLLTLVLERNKLTGPISITFGRLQKLQGLYLASNNLVGSFPDELCHIGRLAELALLDNRHSGSIPSCVSNLTSLRYLY 462 (790)
Q Consensus 383 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~ 462 (790)
+++|++|++++|++++... ..++|+.|++++|.+.+ +|.. .++|+.|++++|++.+. |. -.++|++|+
T Consensus 236 l~~L~~L~l~~N~l~~l~~----~~~~L~~L~l~~N~l~~-l~~~---~~~L~~L~ls~N~l~~l-~~---~~~~L~~L~ 303 (454)
T 1jl5_A 236 LPFLTTIYADNNLLKTLPD----LPPSLEALNVRDNYLTD-LPEL---PQSLTFLDVSENIFSGL-SE---LPPNLYYLN 303 (454)
T ss_dssp CTTCCEEECCSSCCSSCCS----CCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSEE-SC---CCTTCCEEE
T ss_pred CCCCCEEECCCCcCCcccc----cccccCEEECCCCcccc-cCcc---cCcCCEEECcCCccCcc-cC---cCCcCCEEE
Confidence 4445555555554443221 12445555555555543 2221 24455555555554431 11 014666666
Q ss_pred ccCCccccccCcccccCCCCceEeccCCcccccccccccccccCceEeCcCCcccccCcccccCCcccCeeeCCCCcccc
Q 039514 463 LGSNRFTFVIPSTFWSLKDILFFDFSSNFLVGTLSFDIGNLKVLLGINLSENNLSGDMPATIGGLKDLQFMDLAYNRLEG 542 (790)
Q Consensus 463 L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 542 (790)
+++|++++.. . ..++|+.|++++|++++ +|.. +++|+.|++++|++++ +|. .+++|++|++++|++++
T Consensus 304 l~~N~l~~i~-~---~~~~L~~L~Ls~N~l~~-lp~~---~~~L~~L~L~~N~l~~-lp~---~l~~L~~L~L~~N~l~~ 371 (454)
T 1jl5_A 304 ASSNEIRSLC-D---LPPSLEELNVSNNKLIE-LPAL---PPRLERLIASFNHLAE-VPE---LPQNLKQLHVEYNPLRE 371 (454)
T ss_dssp CCSSCCSEEC-C---CCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSS
T ss_pred CcCCcCCccc-C---CcCcCCEEECCCCcccc-cccc---CCcCCEEECCCCcccc-ccc---hhhhccEEECCCCCCCc
Confidence 6666666421 1 11356666776666665 2222 4667777777777764 343 35677777777777776
Q ss_pred --cCCccccCCCCCCEEECCCCcCcccCCccccccCCCCeEeCCCCccee--cCCC
Q 039514 543 --PIPESFGDLTSLEVLNLSKNKISGSIPKSMEKLFYLRELNLSFNELEG--EIPS 594 (790)
Q Consensus 543 --~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~--~~p~ 594 (790)
.+|.++.. ++.|.+.+.+|.. +++|+.|++++|++++ .+|.
T Consensus 372 l~~ip~~l~~--------L~~n~~~~~i~~~---~~~L~~L~ls~N~l~~~~~iP~ 416 (454)
T 1jl5_A 372 FPDIPESVED--------LRMNSHLAEVPEL---PQNLKQLHVETNPLREFPDIPE 416 (454)
T ss_dssp CCCCCTTCCE--------EECCC---------------------------------
T ss_pred CCCChHHHHh--------hhhcccccccccc---cCcCCEEECCCCcCCccccchh
Confidence 44544332 2335555555543 3677888888888876 5553
No 29
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=100.00 E-value=1.1e-38 Score=351.23 Aligned_cols=394 Identities=23% Similarity=0.279 Sum_probs=230.0
Q ss_pred CCCCEEECCCCcCcccCCcCCCCCCCCCeeecccCcccccCcccccccCCCCceecccccc--cceEEcccccCccccCc
Q 039514 150 PHLKALFLDKNMFHGKIPSALSKCKQLQQLNLQLNNLSGAIPKEIGNLTMLKGISLLYNKL--QEALVLGMNNLVGVLPA 227 (790)
Q Consensus 150 ~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~l--~~~l~l~~n~l~~~~p~ 227 (790)
..|++|++++|.+ +.+|.+++++++|++|++++|.+++.+|..++.+.+|+.+++..+.. .+.+++++|.+++ +|.
T Consensus 11 ~~L~~L~l~~n~l-~~iP~~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~~~l~~L~l~~~~l~~-lp~ 88 (454)
T 1jl5_A 11 TFLQEPLRHSSNL-TEMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLDRQAHELELNNLGLSS-LPE 88 (454)
T ss_dssp ------------------------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHHHTCSEEECTTSCCSC-CCS
T ss_pred ccchhhhcccCch-hhCChhHhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhccCCCEEEecCCcccc-CCC
Confidence 4555555555555 45555555555555555555555555555555555554444333321 0224555555554 233
Q ss_pred cccCCCCCcEEEcccCCCcccCCcchhcCCCCcceEeecCCcccccCCccccCCCCCCEEeccCCcccccCcccccCCCC
Q 039514 228 TIFNMSTLKVLILINNSLSGSLPSRIDLSLPTVEVLILALNRFFGTIPSSITNASKLTVLELGGNTFSGLIPDTIGNLRN 307 (790)
Q Consensus 228 ~~~~l~~L~~L~L~~n~l~~~~p~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~ 307 (790)
. .++|++|++++|.+++ +|.. .++|+.|++++|.+.+. |.. .++|++|++++|.+++ +| .|+.+++
T Consensus 89 ~---~~~L~~L~l~~n~l~~-lp~~----~~~L~~L~l~~n~l~~l-~~~---~~~L~~L~L~~n~l~~-lp-~~~~l~~ 154 (454)
T 1jl5_A 89 L---PPHLESLVASCNSLTE-LPEL----PQSLKSLLVDNNNLKAL-SDL---PPLLEYLGVSNNQLEK-LP-ELQNSSF 154 (454)
T ss_dssp C---CTTCSEEECCSSCCSS-CCCC----CTTCCEEECCSSCCSCC-CSC---CTTCCEEECCSSCCSS-CC-CCTTCTT
T ss_pred C---cCCCCEEEccCCcCCc-cccc----cCCCcEEECCCCccCcc-cCC---CCCCCEEECcCCCCCC-Cc-ccCCCCC
Confidence 1 3578888888888875 5542 46788888888877652 221 2578888888888886 45 4888888
Q ss_pred CccccccCCcccCCCCcccccccCCCCCCCCEEEccCCCCcccCCchhhhhcccCcEEEeecCcCcccCchhhhccCCcc
Q 039514 308 LEWLNLSKNSLTSSTSKLSFLSSLANCKKLRSLKLAGNPLDGFLPSSIGNLSKSLETLVIANCSISGNIPQAISNLSNLL 387 (790)
Q Consensus 308 L~~L~Ls~n~l~~~~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~~L~~L~l~~n~l~~~~p~~~~~l~~L~ 387 (790)
|++|++++|++++++.. ..+|++|++++|.+.+ +| .+..+ ++|++|++++|.+++ +|.. .++|+
T Consensus 155 L~~L~l~~N~l~~lp~~---------~~~L~~L~L~~n~l~~-l~-~~~~l-~~L~~L~l~~N~l~~-l~~~---~~~L~ 218 (454)
T 1jl5_A 155 LKIIDVDNNSLKKLPDL---------PPSLEFIAAGNNQLEE-LP-ELQNL-PFLTAIYADNNSLKK-LPDL---PLSLE 218 (454)
T ss_dssp CCEEECCSSCCSCCCCC---------CTTCCEEECCSSCCSS-CC-CCTTC-TTCCEEECCSSCCSS-CCCC---CTTCC
T ss_pred CCEEECCCCcCcccCCC---------cccccEEECcCCcCCc-Cc-cccCC-CCCCEEECCCCcCCc-CCCC---cCccc
Confidence 88888888888765431 2478888888888876 45 45555 578888888888875 3332 25788
Q ss_pred eeeeccccccCccccccccccccCeEEeeccccCccCCccccccccccceecccCcccccCCccccCCCCCCeeeccCCc
Q 039514 388 TLVLERNKLTGPISITFGRLQKLQGLYLASNNLVGSFPDELCHIGRLAELALLDNRHSGSIPSCVSNLTSLRYLYLGSNR 467 (790)
Q Consensus 388 ~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~L~~N~ 467 (790)
+|++++|.++.. + .+..+++|++|++++|++.+ +|.. +++|+.|++++|++.+ +|.. .++|++|++++|+
T Consensus 219 ~L~l~~n~l~~l-p-~~~~l~~L~~L~l~~N~l~~-l~~~---~~~L~~L~l~~N~l~~-l~~~---~~~L~~L~ls~N~ 288 (454)
T 1jl5_A 219 SIVAGNNILEEL-P-ELQNLPFLTTIYADNNLLKT-LPDL---PPSLEALNVRDNYLTD-LPEL---PQSLTFLDVSENI 288 (454)
T ss_dssp EEECCSSCCSSC-C-CCTTCTTCCEEECCSSCCSS-CCSC---CTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSC
T ss_pred EEECcCCcCCcc-c-ccCCCCCCCEEECCCCcCCc-cccc---ccccCEEECCCCcccc-cCcc---cCcCCEEECcCCc
Confidence 888888888743 3 37788888888888888875 4432 3678888888888775 4443 3678888888888
Q ss_pred cccccCcccccCCCCceEeccCCccccccccccccc-ccCceEeCcCCcccccCcccccCCcccCeeeCCCCcccccCCc
Q 039514 468 FTFVIPSTFWSLKDILFFDFSSNFLVGTLSFDIGNL-KVLLGINLSENNLSGDMPATIGGLKDLQFMDLAYNRLEGPIPE 546 (790)
Q Consensus 468 l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l-~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~ 546 (790)
+++.. .. .++|+.|++++|.+++.. .+ ++|++|++++|++++ +|.. +++|++|++++|++++ +|.
T Consensus 289 l~~l~-~~---~~~L~~L~l~~N~l~~i~-----~~~~~L~~L~Ls~N~l~~-lp~~---~~~L~~L~L~~N~l~~-lp~ 354 (454)
T 1jl5_A 289 FSGLS-EL---PPNLYYLNASSNEIRSLC-----DLPPSLEELNVSNNKLIE-LPAL---PPRLERLIASFNHLAE-VPE 354 (454)
T ss_dssp CSEES-CC---CTTCCEEECCSSCCSEEC-----CCCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSC-CCC
T ss_pred cCccc-Cc---CCcCCEEECcCCcCCccc-----CCcCcCCEEECCCCcccc-cccc---CCcCCEEECCCCcccc-ccc
Confidence 87632 11 257788888888877532 22 477888888888875 4433 5778888888888874 444
Q ss_pred cccCCCCCCEEECCCCcCcc--cCCccccccCCCCeEeCCCCcceecCCCCcccCCCCcccccCCcCC
Q 039514 547 SFGDLTSLEVLNLSKNKISG--SIPKSMEKLFYLRELNLSFNELEGEIPSGGIFANFTAESFMGNELL 612 (790)
Q Consensus 547 ~~~~l~~L~~L~L~~N~l~~--~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~~~~~n~~l 612 (790)
.+++|++|++++|++++ .+|.++.. ++.|.+.+.+|.. ..+++...+.+|+..
T Consensus 355 ---~l~~L~~L~L~~N~l~~l~~ip~~l~~--------L~~n~~~~~i~~~--~~~L~~L~ls~N~l~ 409 (454)
T 1jl5_A 355 ---LPQNLKQLHVEYNPLREFPDIPESVED--------LRMNSHLAEVPEL--PQNLKQLHVETNPLR 409 (454)
T ss_dssp ---CCTTCCEEECCSSCCSSCCCCCTTCCE--------EECCC-------------------------
T ss_pred ---hhhhccEEECCCCCCCcCCCChHHHHh--------hhhcccccccccc--cCcCCEEECCCCcCC
Confidence 36778888888888877 55655443 2346666777652 456777777777744
No 30
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=100.00 E-value=4.5e-37 Score=338.72 Aligned_cols=358 Identities=19% Similarity=0.196 Sum_probs=198.3
Q ss_pred ccCCCCCCCCEEECCCCCCcccCChhhhCCCCCCEEeCCCCCCcccCCccccCCCCCcEEEccCccCcccCchhhhccCC
Q 039514 71 SQLGNLSSLTILNLSHNKLSGSVPSSIYTMHTLKFLDFTDNQLSGSVSSFVFNMSSIVDIRLTNNRLSGELPKNICNYLP 150 (790)
Q Consensus 71 ~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~lp~~~~~~l~ 150 (790)
..++.+++|++|++++|.+++. | .|..+++|++|+|++|++++. | +..+++|++|++++|.+++ +| +..++
T Consensus 36 ~~~~~l~~L~~L~Ls~n~l~~~-~-~l~~l~~L~~L~Ls~n~l~~~-~--~~~l~~L~~L~Ls~N~l~~-~~---~~~l~ 106 (457)
T 3bz5_A 36 ISEEQLATLTSLDCHNSSITDM-T-GIEKLTGLTKLICTSNNITTL-D--LSQNTNLTYLACDSNKLTN-LD---VTPLT 106 (457)
T ss_dssp EEHHHHTTCCEEECCSSCCCCC-T-TGGGCTTCSEEECCSSCCSCC-C--CTTCTTCSEEECCSSCCSC-CC---CTTCT
T ss_pred cChhHcCCCCEEEccCCCcccC-h-hhcccCCCCEEEccCCcCCeE-c--cccCCCCCEEECcCCCCce-ee---cCCCC
Confidence 3455666777777777777754 3 567777777777777777764 2 6677777777777777763 44 35677
Q ss_pred CCCEEECCCCcCcccCCcCCCCCCCCCeeecccCcccccCcccccccCCCCceecccccccceEEcccccCccccCcccc
Q 039514 151 HLKALFLDKNMFHGKIPSALSKCKQLQQLNLQLNNLSGAIPKEIGNLTMLKGISLLYNKLQEALVLGMNNLVGVLPATIF 230 (790)
Q Consensus 151 ~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~l~l~~n~l~~~~p~~~~ 230 (790)
+|++|++++|.+++. | ++.+++|++|++++|++++. .++.+++|++|++++|.. .+.+ .+.
T Consensus 107 ~L~~L~L~~N~l~~l-~--~~~l~~L~~L~l~~N~l~~l---~l~~l~~L~~L~l~~n~~-----------~~~~--~~~ 167 (457)
T 3bz5_A 107 KLTYLNCDTNKLTKL-D--VSQNPLLTYLNCARNTLTEI---DVSHNTQLTELDCHLNKK-----------ITKL--DVT 167 (457)
T ss_dssp TCCEEECCSSCCSCC-C--CTTCTTCCEEECTTSCCSCC---CCTTCTTCCEEECTTCSC-----------CCCC--CCT
T ss_pred cCCEEECCCCcCCee-c--CCCCCcCCEEECCCCcccee---ccccCCcCCEEECCCCCc-----------cccc--ccc
Confidence 777777777777753 3 67777777777777777653 256666666655554422 1122 255
Q ss_pred CCCCCcEEEcccCCCcccCCcchhcCCCCcceEeecCCcccccCCccccCCCCCCEEeccCCcccccCcccccCCCCCcc
Q 039514 231 NMSTLKVLILINNSLSGSLPSRIDLSLPTVEVLILALNRFFGTIPSSITNASKLTVLELGGNTFSGLIPDTIGNLRNLEW 310 (790)
Q Consensus 231 ~l~~L~~L~L~~n~l~~~~p~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~ 310 (790)
.+++|+.|++++|.+++ +| ...++.|+.|++++|.+.+. .+..+++|+.|++++|+++++ | +..+++|+.
T Consensus 168 ~l~~L~~L~ls~n~l~~-l~---l~~l~~L~~L~l~~N~l~~~---~l~~l~~L~~L~Ls~N~l~~i-p--~~~l~~L~~ 237 (457)
T 3bz5_A 168 PQTQLTTLDCSFNKITE-LD---VSQNKLLNRLNCDTNNITKL---DLNQNIQLTFLDCSSNKLTEI-D--VTPLTQLTY 237 (457)
T ss_dssp TCTTCCEEECCSSCCCC-CC---CTTCTTCCEEECCSSCCSCC---CCTTCTTCSEEECCSSCCSCC-C--CTTCTTCSE
T ss_pred cCCcCCEEECCCCccce-ec---cccCCCCCEEECcCCcCCee---ccccCCCCCEEECcCCccccc-C--ccccCCCCE
Confidence 56667777777776653 33 22345555555555555443 245556666666666666552 3 555556666
Q ss_pred ccccCCcccCCCCcccccccCCCCCCCCEEEccCCCCcccCCchhhhhcccCcEEEeecCcCcccCchhhhccCCcceee
Q 039514 311 LNLSKNSLTSSTSKLSFLSSLANCKKLRSLKLAGNPLDGFLPSSIGNLSKSLETLVIANCSISGNIPQAISNLSNLLTLV 390 (790)
Q Consensus 311 L~Ls~n~l~~~~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ 390 (790)
|++++|++++.+ +..+++|+.|++++| +|+.|++++|.+.+.+| ++.+++|+.|+
T Consensus 238 L~l~~N~l~~~~--------~~~l~~L~~L~l~~n---------------~L~~L~l~~n~~~~~~~--~~~l~~L~~L~ 292 (457)
T 3bz5_A 238 FDCSVNPLTELD--------VSTLSKLTTLHCIQT---------------DLLEIDLTHNTQLIYFQ--AEGCRKIKELD 292 (457)
T ss_dssp EECCSSCCSCCC--------CTTCTTCCEEECTTC---------------CCSCCCCTTCTTCCEEE--CTTCTTCCCCC
T ss_pred EEeeCCcCCCcC--------HHHCCCCCEEeccCC---------------CCCEEECCCCccCCccc--ccccccCCEEE
Confidence 666666555432 233445555555443 23344445554444443 23444455555
Q ss_pred eccccccCccccccccccccCeEEeeccccCccCCccccccccccceecccCcccccCCccccCCCCCCeeeccCCcccc
Q 039514 391 LERNKLTGPISITFGRLQKLQGLYLASNNLVGSFPDELCHIGRLAELALLDNRHSGSIPSCVSNLTSLRYLYLGSNRFTF 470 (790)
Q Consensus 391 L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~L~~N~l~~ 470 (790)
+++|. ..+.+|. ....|+.|++++| ++|++|++++|++++
T Consensus 293 Ls~n~------------------------~l~~l~~---~~~~L~~L~l~~~-------------~~L~~L~L~~N~l~~ 332 (457)
T 3bz5_A 293 VTHNT------------------------QLYLLDC---QAAGITELDLSQN-------------PKLVYLYLNNTELTE 332 (457)
T ss_dssp CTTCT------------------------TCCEEEC---TTCCCSCCCCTTC-------------TTCCEEECTTCCCSC
T ss_pred CCCCc------------------------ccceecc---CCCcceEechhhc-------------ccCCEEECCCCcccc
Confidence 55444 4333332 1223333333222 345555555555554
Q ss_pred ccCcccccCCCCceEeccCCcccccccccccccccCceEeCcCCcccccCcccccCCcccCeeeCCCCcccccCCcc
Q 039514 471 VIPSTFWSLKDILFFDFSSNFLVGTLSFDIGNLKVLLGINLSENNLSGDMPATIGGLKDLQFMDLAYNRLEGPIPES 547 (790)
Q Consensus 471 ~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~ 547 (790)
. + +..+++|+.|++++|++++ ++.|..|++++|.+.|. ..+..|+.+++++|+++|.+|..
T Consensus 333 l-~--l~~l~~L~~L~l~~N~l~~--------l~~L~~L~l~~n~l~g~-----~~~~~l~~l~l~~N~l~g~ip~~ 393 (457)
T 3bz5_A 333 L-D--VSHNTKLKSLSCVNAHIQD--------FSSVGKIPALNNNFEAE-----GQTITMPKETLTNNSLTIAVSPD 393 (457)
T ss_dssp C-C--CTTCTTCSEEECCSSCCCB--------CTTGGGSSGGGTSEEEE-----EEEEECCCBCCBTTBEEEECCTT
T ss_pred c-c--cccCCcCcEEECCCCCCCC--------ccccccccccCCcEEec-----ceeeecCccccccCcEEEEcChh
Confidence 3 1 4455555555555555543 23344445555555544 13345555666666666665543
No 31
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=100.00 E-value=9.4e-37 Score=336.21 Aligned_cols=367 Identities=18% Similarity=0.206 Sum_probs=274.4
Q ss_pred CcccCChhhhCCCCCCEEeCCCCCCcccCCccccCCCCCcEEEccCccCcccCchhhhccCCCCCEEECCCCcCcccCCc
Q 039514 89 LSGSVPSSIYTMHTLKFLDFTDNQLSGSVSSFVFNMSSIVDIRLTNNRLSGELPKNICNYLPHLKALFLDKNMFHGKIPS 168 (790)
Q Consensus 89 i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~lp~~~~~~l~~L~~L~L~~N~i~~~~p~ 168 (790)
+.+..+..+..+++|++|++++|.+++. | .+..+++|++|++++|.++ .+| +..+++|++|++++|.+++. +
T Consensus 30 ~~~~~~~~~~~l~~L~~L~Ls~n~l~~~-~-~l~~l~~L~~L~Ls~n~l~-~~~---~~~l~~L~~L~Ls~N~l~~~-~- 101 (457)
T 3bz5_A 30 MQATDTISEEQLATLTSLDCHNSSITDM-T-GIEKLTGLTKLICTSNNIT-TLD---LSQNTNLTYLACDSNKLTNL-D- 101 (457)
T ss_dssp CCTTSEEEHHHHTTCCEEECCSSCCCCC-T-TGGGCTTCSEEECCSSCCS-CCC---CTTCTTCSEEECCSSCCSCC-C-
T ss_pred cCcccccChhHcCCCCEEEccCCCcccC-h-hhcccCCCCEEEccCCcCC-eEc---cccCCCCCEEECcCCCCcee-e-
Confidence 4445566788889999999999998875 4 5888888888888888888 455 46788888888888888864 2
Q ss_pred CCCCCCCCCeeecccCcccccCcccccccCCCCceecccccccceEEcccccCccccCccccCCCCCcEEEcccCCCccc
Q 039514 169 ALSKCKQLQQLNLQLNNLSGAIPKEIGNLTMLKGISLLYNKLQEALVLGMNNLVGVLPATIFNMSTLKVLILINNSLSGS 248 (790)
Q Consensus 169 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~l~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~ 248 (790)
++++++|++|++++|++++. | ++.+++|++|++++|++. +. + +..+++|++|++++|...+.
T Consensus 102 -~~~l~~L~~L~L~~N~l~~l-~--~~~l~~L~~L~l~~N~l~-----------~l-~--l~~l~~L~~L~l~~n~~~~~ 163 (457)
T 3bz5_A 102 -VTPLTKLTYLNCDTNKLTKL-D--VSQNPLLTYLNCARNTLT-----------EI-D--VSHNTQLTELDCHLNKKITK 163 (457)
T ss_dssp -CTTCTTCCEEECCSSCCSCC-C--CTTCTTCCEEECTTSCCS-----------CC-C--CTTCTTCCEEECTTCSCCCC
T ss_pred -cCCCCcCCEEECCCCcCCee-c--CCCCCcCCEEECCCCccc-----------ee-c--cccCCcCCEEECCCCCcccc
Confidence 78888888888888888763 3 677777777665555443 21 2 55566666666666643322
Q ss_pred CCcchhcCCCCcceEeecCCcccccCCccccCCCCCCEEeccCCcccccCcccccCCCCCccccccCCcccCCCCccccc
Q 039514 249 LPSRIDLSLPTVEVLILALNRFFGTIPSSITNASKLTVLELGGNTFSGLIPDTIGNLRNLEWLNLSKNSLTSSTSKLSFL 328 (790)
Q Consensus 249 ~p~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~ 328 (790)
+ .+..+++|+.|++++|.++++ | +..+++|+.|++++|.+++.
T Consensus 164 ~---------------------------~~~~l~~L~~L~ls~n~l~~l-~--l~~l~~L~~L~l~~N~l~~~------- 206 (457)
T 3bz5_A 164 L---------------------------DVTPQTQLTTLDCSFNKITEL-D--VSQNKLLNRLNCDTNNITKL------- 206 (457)
T ss_dssp C---------------------------CCTTCTTCCEEECCSSCCCCC-C--CTTCTTCCEEECCSSCCSCC-------
T ss_pred c---------------------------ccccCCcCCEEECCCCcccee-c--cccCCCCCEEECcCCcCCee-------
Confidence 2 244566677777777777663 3 66677777777777777654
Q ss_pred ccCCCCCCCCEEEccCCCCcccCCchhhhhcccCcEEEeecCcCcccCchhhhccCCcceeeeccccccCcccccccccc
Q 039514 329 SSLANCKKLRSLKLAGNPLDGFLPSSIGNLSKSLETLVIANCSISGNIPQAISNLSNLLTLVLERNKLTGPISITFGRLQ 408 (790)
Q Consensus 329 ~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~ 408 (790)
.+..+++|++|++++|++++ +| +..+ ++|++|++++|++++.. +..+++|+.|++++|
T Consensus 207 -~l~~l~~L~~L~Ls~N~l~~-ip--~~~l-~~L~~L~l~~N~l~~~~---~~~l~~L~~L~l~~n-------------- 264 (457)
T 3bz5_A 207 -DLNQNIQLTFLDCSSNKLTE-ID--VTPL-TQLTYFDCSVNPLTELD---VSTLSKLTTLHCIQT-------------- 264 (457)
T ss_dssp -CCTTCTTCSEEECCSSCCSC-CC--CTTC-TTCSEEECCSSCCSCCC---CTTCTTCCEEECTTC--------------
T ss_pred -ccccCCCCCEEECcCCcccc-cC--cccc-CCCCEEEeeCCcCCCcC---HHHCCCCCEEeccCC--------------
Confidence 25566777778888877776 34 4444 57888888888887653 456778888887765
Q ss_pred ccCeEEeeccccCccCCccccccccccceecccCcccccCCccccCCCCCCeeeccCCccccccCcccccCCCCceEecc
Q 039514 409 KLQGLYLASNNLVGSFPDELCHIGRLAELALLDNRHSGSIPSCVSNLTSLRYLYLGSNRFTFVIPSTFWSLKDILFFDFS 488 (790)
Q Consensus 409 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls 488 (790)
+|+.|++++|.+.+.+| +..+++|+.|++++|...+.+|. ..++|+.|++++| ++|+.|+++
T Consensus 265 ~L~~L~l~~n~~~~~~~--~~~l~~L~~L~Ls~n~~l~~l~~---~~~~L~~L~l~~~-------------~~L~~L~L~ 326 (457)
T 3bz5_A 265 DLLEIDLTHNTQLIYFQ--AEGCRKIKELDVTHNTQLYLLDC---QAAGITELDLSQN-------------PKLVYLYLN 326 (457)
T ss_dssp CCSCCCCTTCTTCCEEE--CTTCTTCCCCCCTTCTTCCEEEC---TTCCCSCCCCTTC-------------TTCCEEECT
T ss_pred CCCEEECCCCccCCccc--ccccccCCEEECCCCcccceecc---CCCcceEechhhc-------------ccCCEEECC
Confidence 45678888888877776 46789999999999998887774 4567778877766 579999999
Q ss_pred CCcccccccccccccccCceEeCcCCcccccCcccccCCcccCeeeCCCCcccccCCccccCCCCCCEEECCCCcCcccC
Q 039514 489 SNFLVGTLSFDIGNLKVLLGINLSENNLSGDMPATIGGLKDLQFMDLAYNRLEGPIPESFGDLTSLEVLNLSKNKISGSI 568 (790)
Q Consensus 489 ~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 568 (790)
+|++++. .++.++.|+.|++++|++++ ++.|..|++++|.++|. +.+..|+.+++++|+++|.+
T Consensus 327 ~N~l~~l---~l~~l~~L~~L~l~~N~l~~--------l~~L~~L~l~~n~l~g~-----~~~~~l~~l~l~~N~l~g~i 390 (457)
T 3bz5_A 327 NTELTEL---DVSHNTKLKSLSCVNAHIQD--------FSSVGKIPALNNNFEAE-----GQTITMPKETLTNNSLTIAV 390 (457)
T ss_dssp TCCCSCC---CCTTCTTCSEEECCSSCCCB--------CTTGGGSSGGGTSEEEE-----EEEEECCCBCCBTTBEEEEC
T ss_pred CCccccc---ccccCCcCcEEECCCCCCCC--------ccccccccccCCcEEec-----ceeeecCccccccCcEEEEc
Confidence 9999985 48899999999999999985 35788889999999876 24567888999999999999
Q ss_pred Cccccc
Q 039514 569 PKSMEK 574 (790)
Q Consensus 569 p~~~~~ 574 (790)
|..+..
T Consensus 391 p~~~~~ 396 (457)
T 3bz5_A 391 SPDLLD 396 (457)
T ss_dssp CTTCBC
T ss_pred ChhHhc
Confidence 876543
No 32
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=6.9e-37 Score=342.03 Aligned_cols=347 Identities=22% Similarity=0.204 Sum_probs=227.0
Q ss_pred cEEEcccCCCcccCCcchhcCCCCcceEeecCCcccccCCccccCCCCCCEEeccCCcccccCcccccCCCCCccccccC
Q 039514 236 KVLILINNSLSGSLPSRIDLSLPTVEVLILALNRFFGTIPSSITNASKLTVLELGGNTFSGLIPDTIGNLRNLEWLNLSK 315 (790)
Q Consensus 236 ~~L~L~~n~l~~~~p~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~ 315 (790)
+.++.+++.++ .+|..+. +.++.|++++|.+.+..+..|.++++|++|++++|.+++..|..|..+++|++|+|++
T Consensus 14 ~~v~c~~~~l~-~ip~~~~---~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~ 89 (477)
T 2id5_A 14 RAVLCHRKRFV-AVPEGIP---TETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRS 89 (477)
T ss_dssp TEEECCSCCCS-SCCSCCC---TTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CEEEeCCCCcC-cCCCCCC---CCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCC
Confidence 46777777776 5665432 4677777887777777777777777788888877777777777777777777777777
Q ss_pred CcccCCCCcccccccCCCCCCCCEEEccCCCCcccCCchhhhhcccCcEEEeecCcCcccCchhhhccCCcceeeecccc
Q 039514 316 NSLTSSTSKLSFLSSLANCKKLRSLKLAGNPLDGFLPSSIGNLSKSLETLVIANCSISGNIPQAISNLSNLLTLVLERNK 395 (790)
Q Consensus 316 n~l~~~~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~ 395 (790)
|.++.++. ..+..+++|++|++++|.+.+..|..+..+ ++|++|++++|.+.+..+..|..+++|+.|++++|.
T Consensus 90 n~l~~~~~-----~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l-~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~ 163 (477)
T 2id5_A 90 NRLKLIPL-----GVFTGLSNLTKLDISENKIVILLDYMFQDL-YNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCN 163 (477)
T ss_dssp SCCCSCCT-----TSSTTCTTCCEEECTTSCCCEECTTTTTTC-TTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCC
T ss_pred CcCCccCc-----ccccCCCCCCEEECCCCccccCChhHcccc-ccCCEEECCCCccceeChhhccCCCCCCEEECCCCc
Confidence 77776553 235566666666666666665555555544 456666666666655555555555566666666555
Q ss_pred ccCccccccccccccCeEEeeccccCccCCccccccccccceecccCcccccCCccccCCCCCCeeeccCCccccccCcc
Q 039514 396 LTGPISITFGRLQKLQGLYLASNNLVGSFPDELCHIGRLAELALLDNRHSGSIPSCVSNLTSLRYLYLGSNRFTFVIPST 475 (790)
Q Consensus 396 l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~ 475 (790)
+++..+..+..+++|+.|++++|.+.+.. +..+..+++|++|++++|.+.+.+|..
T Consensus 164 l~~~~~~~l~~l~~L~~L~l~~n~i~~~~------------------------~~~~~~l~~L~~L~l~~~~~~~~~~~~ 219 (477)
T 2id5_A 164 LTSIPTEALSHLHGLIVLRLRHLNINAIR------------------------DYSFKRLYRLKVLEISHWPYLDTMTPN 219 (477)
T ss_dssp CSSCCHHHHTTCTTCCEEEEESCCCCEEC------------------------TTCSCSCTTCCEEEEECCTTCCEECTT
T ss_pred CcccChhHhcccCCCcEEeCCCCcCcEeC------------------------hhhcccCcccceeeCCCCccccccCcc
Confidence 55555445555555555555555555444 444455555555555555544444444
Q ss_pred cccCCCCceEeccCCcccccccccccccccCceEeCcCCcccccCcccccCCcccCeeeCCCCcccccCCccccCCCCCC
Q 039514 476 FWSLKDILFFDFSSNFLVGTLSFDIGNLKVLLGINLSENNLSGDMPATIGGLKDLQFMDLAYNRLEGPIPESFGDLTSLE 555 (790)
Q Consensus 476 ~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 555 (790)
.....+|+.|++++|.+++..+..+..+++|+.|+|++|.+++..+..|.++++|+.|+|++|++++..|..|.++++|+
T Consensus 220 ~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~ 299 (477)
T 2id5_A 220 CLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLR 299 (477)
T ss_dssp TTTTCCCSEEEEESSCCCSCCHHHHTTCTTCCEEECCSSCCCEECTTSCTTCTTCCEEECCSSCCSEECTTTBTTCTTCC
T ss_pred cccCccccEEECcCCcccccCHHHhcCccccCeeECCCCcCCccChhhccccccCCEEECCCCccceECHHHhcCcccCC
Confidence 44444666666666666655555666777777777777777777777777777888888888887777777777788888
Q ss_pred EEECCCCcCcccCCccccccCCCCeEeCCCCcceecCCCCcccCCCCcccccCCcCCCCCC
Q 039514 556 VLNLSKNKISGSIPKSMEKLFYLRELNLSFNELEGEIPSGGIFANFTAESFMGNELLCGLP 616 (790)
Q Consensus 556 ~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~~~~~n~~l~~~p 616 (790)
+|+|++|++++..+..|..+++|++|++++|++.+.++..+.+.......+.++...|..|
T Consensus 300 ~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~c~c~~~~~~~~~~~~~~~~~~~~C~~p 360 (477)
T 2id5_A 300 VLNVSGNQLTTLEESVFHSVGNLETLILDSNPLACDCRLLWVFRRRWRLNFNRQQPTCATP 360 (477)
T ss_dssp EEECCSSCCSCCCGGGBSCGGGCCEEECCSSCEECSGGGHHHHTTTTSSCCTTCCCBEEES
T ss_pred EEECCCCcCceeCHhHcCCCcccCEEEccCCCccCccchHhHHhhhhccccCccCceeCCc
Confidence 8888888887666667777778888888888887665543333333334455666666544
No 33
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=100.00 E-value=1.1e-35 Score=330.65 Aligned_cols=344 Identities=26% Similarity=0.378 Sum_probs=169.4
Q ss_pred CCCCEEECCCCCCcccCChhhhCCCCCCEEeCCCCCCcccCCccccCCCCCcEEEccCccCcccCchhhhccCCCCCEEE
Q 039514 77 SSLTILNLSHNKLSGSVPSSIYTMHTLKFLDFTDNQLSGSVSSFVFNMSSIVDIRLTNNRLSGELPKNICNYLPHLKALF 156 (790)
Q Consensus 77 ~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~lp~~~~~~l~~L~~L~ 156 (790)
++|+.|++++|.+... | .+..+++|++|+|++|++++..+ +.++++|++|++++|.++ .++. +..+++|++|+
T Consensus 46 ~~l~~L~l~~~~i~~l-~-~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~l~~n~l~-~~~~--~~~l~~L~~L~ 118 (466)
T 1o6v_A 46 DQVTTLQADRLGIKSI-D-GVEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIA-DITP--LANLTNLTGLT 118 (466)
T ss_dssp HTCCEEECCSSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCC-CCGG--GTTCTTCCEEE
T ss_pred ccccEEecCCCCCccC-c-chhhhcCCCEEECCCCccCCchh--hhccccCCEEECCCCccc-cChh--hcCCCCCCEEE
Confidence 4556666666655532 2 25556666666666666654433 556666666666666665 3333 35566666666
Q ss_pred CCCCcCcccCCcCCCCCCCCCeeecccCcccccCcccccccCCCCceecccccccceEEcccccCccccCccccCCCCCc
Q 039514 157 LDKNMFHGKIPSALSKCKQLQQLNLQLNNLSGAIPKEIGNLTMLKGISLLYNKLQEALVLGMNNLVGVLPATIFNMSTLK 236 (790)
Q Consensus 157 L~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~l~l~~n~l~~~~p~~~~~l~~L~ 236 (790)
+++|.+++..+ +.++++|++|++++|.+++. + .++.+++|++|+++ |. +.+.. .+.++++|+
T Consensus 119 L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~-~-~~~~l~~L~~L~l~-~~-----------~~~~~--~~~~l~~L~ 180 (466)
T 1o6v_A 119 LFNNQITDIDP--LKNLTNLNRLELSSNTISDI-S-ALSGLTSLQQLSFG-NQ-----------VTDLK--PLANLTTLE 180 (466)
T ss_dssp CCSSCCCCCGG--GTTCTTCSEEEEEEEEECCC-G-GGTTCTTCSEEEEE-ES-----------CCCCG--GGTTCTTCC
T ss_pred CCCCCCCCChH--HcCCCCCCEEECCCCccCCC-h-hhccCCcccEeecC-Cc-----------ccCch--hhccCCCCC
Confidence 66666665432 66666677777776666542 2 36666666665543 11 11111 256666677
Q ss_pred EEEcccCCCcccCCcchhcCCCCcceEeecCCcccccCCccccCCCCCCEEeccCCcccccCcccccCCCCCccccccCC
Q 039514 237 VLILINNSLSGSLPSRIDLSLPTVEVLILALNRFFGTIPSSITNASKLTVLELGGNTFSGLIPDTIGNLRNLEWLNLSKN 316 (790)
Q Consensus 237 ~L~L~~n~l~~~~p~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n 316 (790)
.|++++|.+.+ ++. ...+++|+.|++++|.+.+..| ++.+++|+.|++++|.+++. ..+..+++|++|++++|
T Consensus 181 ~L~l~~n~l~~-~~~--l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n 253 (466)
T 1o6v_A 181 RLDISSNKVSD-ISV--LAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANN 253 (466)
T ss_dssp EEECCSSCCCC-CGG--GGGCTTCSEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSS
T ss_pred EEECcCCcCCC-Chh--hccCCCCCEEEecCCccccccc--ccccCCCCEEECCCCCcccc--hhhhcCCCCCEEECCCC
Confidence 77777666542 111 1123344444444443333322 33444555555555554432 23444444444444444
Q ss_pred cccCCCCcccccccCCCCCCCCEEEccCCCCcccCCchhhhhcccCcEEEeecCcCcccCchhhhccCCcceeeeccccc
Q 039514 317 SLTSSTSKLSFLSSLANCKKLRSLKLAGNPLDGFLPSSIGNLSKSLETLVIANCSISGNIPQAISNLSNLLTLVLERNKL 396 (790)
Q Consensus 317 ~l~~~~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l 396 (790)
.+.+.+ .+..+++ |++|++++|.+++..+ +..+++|+.|++++|++
T Consensus 254 ~l~~~~-------~~~~l~~-------------------------L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l 299 (466)
T 1o6v_A 254 QISNLA-------PLSGLTK-------------------------LTELKLGANQISNISP--LAGLTALTNLELNENQL 299 (466)
T ss_dssp CCCCCG-------GGTTCTT-------------------------CSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCC
T ss_pred ccccch-------hhhcCCC-------------------------CCEEECCCCccCcccc--ccCCCccCeEEcCCCcc
Confidence 444322 1333344 4444444444443222 44444555555555544
Q ss_pred cCccccccccccccCeEEeeccccCccCCccccccccccceecccCcccccCCccccCCCCCCeeeccCCccccccCccc
Q 039514 397 TGPISITFGRLQKLQGLYLASNNLVGSFPDELCHIGRLAELALLDNRHSGSIPSCVSNLTSLRYLYLGSNRFTFVIPSTF 476 (790)
Q Consensus 397 ~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~ 476 (790)
++..+ +..+++|+.|++++|++.+..| +..+++|+.|++++|++.+. ..+..+++|++|++++|++++..| +
T Consensus 300 ~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~ 371 (466)
T 1o6v_A 300 EDISP--ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFYNNKVSDV--SSLANLTNINWLSAGHNQISDLTP--L 371 (466)
T ss_dssp SCCGG--GGGCTTCSEEECCSSCCSCCGG--GGGCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCBCGG--G
T ss_pred cCchh--hcCCCCCCEEECcCCcCCCchh--hccCccCCEeECCCCccCCc--hhhccCCCCCEEeCCCCccCccch--h
Confidence 44332 3444455555555554443332 33444444444444444332 234445555555555555554444 4
Q ss_pred ccCCCCceEeccCCcccc
Q 039514 477 WSLKDILFFDFSSNFLVG 494 (790)
Q Consensus 477 ~~l~~L~~L~ls~N~l~~ 494 (790)
..+++|+.|++++|.+++
T Consensus 372 ~~l~~L~~L~l~~n~~~~ 389 (466)
T 1o6v_A 372 ANLTRITQLGLNDQAWTN 389 (466)
T ss_dssp TTCTTCCEEECCCEEEEC
T ss_pred hcCCCCCEEeccCCcccC
Confidence 444455555555554443
No 34
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=100.00 E-value=9.4e-36 Score=331.19 Aligned_cols=346 Identities=21% Similarity=0.347 Sum_probs=172.3
Q ss_pred CCCCCCEEeCCCCCCcccCCccccCCCCCcEEEccCccCcccCchhhhccCCCCCEEECCCCcCcccCCcCCCCCCCCCe
Q 039514 99 TMHTLKFLDFTDNQLSGSVSSFVFNMSSIVDIRLTNNRLSGELPKNICNYLPHLKALFLDKNMFHGKIPSALSKCKQLQQ 178 (790)
Q Consensus 99 ~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~lp~~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~~L~~ 178 (790)
.+++|+.|+++++.+... | .+..+++|++|++++|.++ .+|. +..+++|++|++++|.+++..+ +.++++|++
T Consensus 44 ~l~~l~~L~l~~~~i~~l-~-~~~~l~~L~~L~Ls~n~l~-~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~ 116 (466)
T 1o6v_A 44 DLDQVTTLQADRLGIKSI-D-GVEYLNNLTQINFSNNQLT-DITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTG 116 (466)
T ss_dssp HHHTCCEEECCSSCCCCC-T-TGGGCTTCCEEECCSSCCC-CCGG--GTTCTTCCEEECCSSCCCCCGG--GTTCTTCCE
T ss_pred HhccccEEecCCCCCccC-c-chhhhcCCCEEECCCCccC-Cchh--hhccccCCEEECCCCccccChh--hcCCCCCCE
Confidence 345677777777777643 3 2566667777777777666 4443 3566666666666666665443 666666666
Q ss_pred eecccCcccccCcccccccCCCCceecccccccceEEcccccCccccCccccCCCCCcEEEcccCCCcccCCcchhcCCC
Q 039514 179 LNLQLNNLSGAIPKEIGNLTMLKGISLLYNKLQEALVLGMNNLVGVLPATIFNMSTLKVLILINNSLSGSLPSRIDLSLP 258 (790)
Q Consensus 179 L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~l~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~~l~ 258 (790)
|++++|.+++..+ +.++++|++|++++|.+.. ++ .+..+++|+.|++++ .+
T Consensus 117 L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~------------~~-~~~~l~~L~~L~l~~-~~------------- 167 (466)
T 1o6v_A 117 LTLFNNQITDIDP--LKNLTNLNRLELSSNTISD------------IS-ALSGLTSLQQLSFGN-QV------------- 167 (466)
T ss_dssp EECCSSCCCCCGG--GTTCTTCSEEEEEEEEECC------------CG-GGTTCTTCSEEEEEE-SC-------------
T ss_pred EECCCCCCCCChH--HcCCCCCCEEECCCCccCC------------Ch-hhccCCcccEeecCC-cc-------------
Confidence 6666666654322 5555555554444443321 11 234444444444431 11
Q ss_pred CcceEeecCCcccccCCccccCCCCCCEEeccCCcccccCcccccCCCCCccccccCCcccCCCCcccccccCCCCCCCC
Q 039514 259 TVEVLILALNRFFGTIPSSITNASKLTVLELGGNTFSGLIPDTIGNLRNLEWLNLSKNSLTSSTSKLSFLSSLANCKKLR 338 (790)
Q Consensus 259 ~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~l~~l~~L~ 338 (790)
.+. ..+.++++|+.|++++|.+++. ..+..+++|++|++++|.+.+..+ +..++
T Consensus 168 ------------~~~--~~~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~-------~~~l~--- 221 (466)
T 1o6v_A 168 ------------TDL--KPLANLTTLERLDISSNKVSDI--SVLAKLTNLESLIATNNQISDITP-------LGILT--- 221 (466)
T ss_dssp ------------CCC--GGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG-------GGGCT---
T ss_pred ------------cCc--hhhccCCCCCEEECcCCcCCCC--hhhccCCCCCEEEecCCccccccc-------ccccC---
Confidence 111 1144555666666666655543 124444555555555544443221 22233
Q ss_pred EEEccCCCCcccCCchhhhhcccCcEEEeecCcCcccCchhhhccCCcceeeeccccccCccccccccccccCeEEeecc
Q 039514 339 SLKLAGNPLDGFLPSSIGNLSKSLETLVIANCSISGNIPQAISNLSNLLTLVLERNKLTGPISITFGRLQKLQGLYLASN 418 (790)
Q Consensus 339 ~L~Ls~n~l~~~~p~~~~~l~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n 418 (790)
+|++|++++|.+++. ..+..+++|+.|++++|.+.+..+ +..+++|+.|++++|
T Consensus 222 ----------------------~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n 275 (466)
T 1o6v_A 222 ----------------------NLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGAN 275 (466)
T ss_dssp ----------------------TCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSS
T ss_pred ----------------------CCCEEECCCCCcccc--hhhhcCCCCCEEECCCCccccchh--hhcCCCCCEEECCCC
Confidence 445555555544432 234455555555555555554433 445555555555555
Q ss_pred ccCccCCccccccccccceecccCcccccCCccccCCCCCCeeeccCCccccccCcccccCCCCceEeccCCcccccccc
Q 039514 419 NLVGSFPDELCHIGRLAELALLDNRHSGSIPSCVSNLTSLRYLYLGSNRFTFVIPSTFWSLKDILFFDFSSNFLVGTLSF 498 (790)
Q Consensus 419 ~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~ 498 (790)
.+.+..+ +..++ +|++|++++|++++..+ +..+++|+.|++++|.+++..+
T Consensus 276 ~l~~~~~--~~~l~------------------------~L~~L~L~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~- 326 (466)
T 1o6v_A 276 QISNISP--LAGLT------------------------ALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISP- 326 (466)
T ss_dssp CCCCCGG--GTTCT------------------------TCSEEECCSSCCSCCGG--GGGCTTCSEEECCSSCCSCCGG-
T ss_pred ccCcccc--ccCCC------------------------ccCeEEcCCCcccCchh--hcCCCCCCEEECcCCcCCCchh-
Confidence 5543221 33333 33333333333333222 3333444444444444443333
Q ss_pred cccccccCceEeCcCCcccccCcccccCCcccCeeeCCCCcccccCCccccCCCCCCEEECCCCcCcc
Q 039514 499 DIGNLKVLLGINLSENNLSGDMPATIGGLKDLQFMDLAYNRLEGPIPESFGDLTSLEVLNLSKNKISG 566 (790)
Q Consensus 499 ~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 566 (790)
+..+++|+.|++++|++++. ..+..+++|+.|++++|++++..| +..+++|+.|++++|.+++
T Consensus 327 -~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~~~~ 389 (466)
T 1o6v_A 327 -VSSLTKLQRLFFYNNKVSDV--SSLANLTNINWLSAGHNQISDLTP--LANLTRITQLGLNDQAWTN 389 (466)
T ss_dssp -GGGCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCBCGG--GTTCTTCCEEECCCEEEEC
T ss_pred -hccCccCCEeECCCCccCCc--hhhccCCCCCEEeCCCCccCccch--hhcCCCCCEEeccCCcccC
Confidence 34445555555555555433 245555555555555555555444 5555555555555555554
No 35
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.3e-35 Score=331.73 Aligned_cols=346 Identities=21% Similarity=0.215 Sum_probs=264.3
Q ss_pred EEcccccCccccCccccCCCCCcEEEcccCCCcccCCcchhcCCCCcceEeecCCcccccCCccccCCCCCCEEeccCCc
Q 039514 214 LVLGMNNLVGVLPATIFNMSTLKVLILINNSLSGSLPSRIDLSLPTVEVLILALNRFFGTIPSSITNASKLTVLELGGNT 293 (790)
Q Consensus 214 l~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~l~~n~ 293 (790)
++.+.+.++. +|..+. ++++.|+|++|.+++..+. .+..+++|+.|+|++|.+.+..|..|.++++|++|++++|.
T Consensus 16 v~c~~~~l~~-ip~~~~--~~l~~L~L~~n~l~~~~~~-~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~ 91 (477)
T 2id5_A 16 VLCHRKRFVA-VPEGIP--TETRLLDLGKNRIKTLNQD-EFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNR 91 (477)
T ss_dssp EECCSCCCSS-CCSCCC--TTCSEEECCSSCCCEECTT-TTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSC
T ss_pred EEeCCCCcCc-CCCCCC--CCCcEEECCCCccceECHh-HccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCc
Confidence 4444444443 455443 5899999999999854444 44579999999999999999999999999999999999999
Q ss_pred ccccCcccccCCCCCccccccCCcccCCCCcccccccCCCCCCCCEEEccCCCCcccCCchhhhhcccCcEEEeecCcCc
Q 039514 294 FSGLIPDTIGNLRNLEWLNLSKNSLTSSTSKLSFLSSLANCKKLRSLKLAGNPLDGFLPSSIGNLSKSLETLVIANCSIS 373 (790)
Q Consensus 294 l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~~L~~L~l~~n~l~ 373 (790)
++++.+..|..+++|++|+|++|.+....+ ..+..+++|++|++++|.+.+..+..+..+ ++|++|++++|.++
T Consensus 92 l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~-----~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l-~~L~~L~l~~n~l~ 165 (477)
T 2id5_A 92 LKLIPLGVFTGLSNLTKLDISENKIVILLD-----YMFQDLYNLKSLEVGDNDLVYISHRAFSGL-NSLEQLTLEKCNLT 165 (477)
T ss_dssp CCSCCTTSSTTCTTCCEEECTTSCCCEECT-----TTTTTCTTCCEEEECCTTCCEECTTSSTTC-TTCCEEEEESCCCS
T ss_pred CCccCcccccCCCCCCEEECCCCccccCCh-----hHccccccCCEEECCCCccceeChhhccCC-CCCCEEECCCCcCc
Confidence 998888889999999999999999987643 357889999999999999998888888877 68999999999999
Q ss_pred ccCchhhhccCCcceeeeccccccCccccccccccccCeEEeeccccCccCCccccccccccceecccCcccccCCcccc
Q 039514 374 GNIPQAISNLSNLLTLVLERNKLTGPISITFGRLQKLQGLYLASNNLVGSFPDELCHIGRLAELALLDNRHSGSIPSCVS 453 (790)
Q Consensus 374 ~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~p~~~~ 453 (790)
+..+..+..+++|+.|++++|.+.+..+..|..+++|+.|++++|.+.+.+|.......
T Consensus 166 ~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~--------------------- 224 (477)
T 2id5_A 166 SIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGL--------------------- 224 (477)
T ss_dssp SCCHHHHTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCTTCCEECTTTTTTC---------------------
T ss_pred ccChhHhcccCCCcEEeCCCCcCcEeChhhcccCcccceeeCCCCccccccCcccccCc---------------------
Confidence 88888899999999999999999998888899999999999999887765554433333
Q ss_pred CCCCCCeeeccCCccccccCcccccCCCCceEeccCCcccccccccccccccCceEeCcCCcccccCcccccCCcccCee
Q 039514 454 NLTSLRYLYLGSNRFTFVIPSTFWSLKDILFFDFSSNFLVGTLSFDIGNLKVLLGINLSENNLSGDMPATIGGLKDLQFM 533 (790)
Q Consensus 454 ~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 533 (790)
+|++|++++|+++...+..+..+++|+.|++++|.+++..+..+..++.|+.|+|++|+++++.|..|.++++|+.|
T Consensus 225 ---~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 301 (477)
T 2id5_A 225 ---NLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVL 301 (477)
T ss_dssp ---CCSEEEEESSCCCSCCHHHHTTCTTCCEEECCSSCCCEECTTSCTTCTTCCEEECCSSCCSEECTTTBTTCTTCCEE
T ss_pred ---cccEEECcCCcccccCHHHhcCccccCeeECCCCcCCccChhhccccccCCEEECCCCccceECHHHhcCcccCCEE
Confidence 45555555555554444455555666666666666665555566667777777777777777777777777777888
Q ss_pred eCCCCcccccCCccccCCCCCCEEECCCCcCcccCCccccccCCCCeEeCCCCcceecCCC
Q 039514 534 DLAYNRLEGPIPESFGDLTSLEVLNLSKNKISGSIPKSMEKLFYLRELNLSFNELEGEIPS 594 (790)
Q Consensus 534 ~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~ 594 (790)
+|++|++++..+..|..+++|++|+|++|.+...-+. ..-...+..+++.++...+..|.
T Consensus 302 ~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~c~c~~-~~~~~~~~~~~~~~~~~~C~~p~ 361 (477)
T 2id5_A 302 NVSGNQLTTLEESVFHSVGNLETLILDSNPLACDCRL-LWVFRRRWRLNFNRQQPTCATPE 361 (477)
T ss_dssp ECCSSCCSCCCGGGBSCGGGCCEEECCSSCEECSGGG-HHHHTTTTSSCCTTCCCBEEESG
T ss_pred ECCCCcCceeCHhHcCCCcccCEEEccCCCccCccch-HhHHhhhhccccCccCceeCCch
Confidence 8888877776667777777788888888877643211 11112334455566665554443
No 36
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=100.00 E-value=7.9e-35 Score=316.26 Aligned_cols=312 Identities=19% Similarity=0.212 Sum_probs=243.7
Q ss_pred CCCCCCEEECCCCCCcccCChhhhCCCCCCEEeCCCCCCcccCCccccCCCCCcEEEccCccCcccCchhhhccCCCCCE
Q 039514 75 NLSSLTILNLSHNKLSGSVPSSIYTMHTLKFLDFTDNQLSGSVSSFVFNMSSIVDIRLTNNRLSGELPKNICNYLPHLKA 154 (790)
Q Consensus 75 ~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~lp~~~~~~l~~L~~ 154 (790)
.++++++|++++|.+..+.+..|..+++|++|+|++|++++..+..|.++++|++|++++|.++ .+|...+..+++|++
T Consensus 43 ~l~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~~l~~L~~ 121 (390)
T 3o6n_A 43 TLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIR-YLPPHVFQNVPLLTV 121 (390)
T ss_dssp GGCCCSEEEEESCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCE
T ss_pred ccCCceEEEecCCchhhCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCC-cCCHHHhcCCCCCCE
Confidence 4578888888888888777777888888888888888888888888888888888888888888 555555677888888
Q ss_pred EECCCCcCcccCCcCCCCCCCCCeeecccCcccccCcccccccCCCCceecccccccceEEcccccCccccCccccCCCC
Q 039514 155 LFLDKNMFHGKIPSALSKCKQLQQLNLQLNNLSGAIPKEIGNLTMLKGISLLYNKLQEALVLGMNNLVGVLPATIFNMST 234 (790)
Q Consensus 155 L~L~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~l~l~~n~l~~~~p~~~~~l~~ 234 (790)
|+|++|.++...+..|.++++|++|++++|.+++..+..|+.+++|++|++++|++.. . .+..+++
T Consensus 122 L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~-----------~---~~~~l~~ 187 (390)
T 3o6n_A 122 LVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTH-----------V---DLSLIPS 187 (390)
T ss_dssp EECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSB-----------C---CGGGCTT
T ss_pred EECCCCccCcCCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEEECCCCcCCc-----------c---ccccccc
Confidence 8888888886666667888888888888888887777888888888887777666543 1 2455678
Q ss_pred CcEEEcccCCCcccCCcchhcCCCCcceEeecCCcccccCCccccCCCCCCEEeccCCcccccCcccccCCCCCcccccc
Q 039514 235 LKVLILINNSLSGSLPSRIDLSLPTVEVLILALNRFFGTIPSSITNASKLTVLELGGNTFSGLIPDTIGNLRNLEWLNLS 314 (790)
Q Consensus 235 L~~L~L~~n~l~~~~p~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls 314 (790)
|+.|++++|.+++ ++ ..+.++.|++++|.+..... . ..++|+.|++++|.+++. ..+..+++|++|+++
T Consensus 188 L~~L~l~~n~l~~-~~-----~~~~L~~L~l~~n~l~~~~~-~--~~~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~Ls 256 (390)
T 3o6n_A 188 LFHANVSYNLLST-LA-----IPIAVEELDASHNSINVVRG-P--VNVELTILKLQHNNLTDT--AWLLNYPGLVEVDLS 256 (390)
T ss_dssp CSEEECCSSCCSE-EE-----CCSSCSEEECCSSCCCEEEC-C--CCSSCCEEECCSSCCCCC--GGGGGCTTCSEEECC
T ss_pred cceeecccccccc-cC-----CCCcceEEECCCCeeeeccc-c--ccccccEEECCCCCCccc--HHHcCCCCccEEECC
Confidence 8888888887763 21 24578888888888876532 2 346888899999888864 468888889999999
Q ss_pred CCcccCCCCcccccccCCCCCCCCEEEccCCCCcccCCchhhhhcccCcEEEeecCcCcccCchhhhccCCcceeeeccc
Q 039514 315 KNSLTSSTSKLSFLSSLANCKKLRSLKLAGNPLDGFLPSSIGNLSKSLETLVIANCSISGNIPQAISNLSNLLTLVLERN 394 (790)
Q Consensus 315 ~n~l~~~~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N 394 (790)
+|.+++..+ ..+..+++|++|++++|.+++. |..+..+ ++|++|++++|.++ .+|..+..+++|+.|++++|
T Consensus 257 ~n~l~~~~~-----~~~~~l~~L~~L~L~~n~l~~~-~~~~~~l-~~L~~L~L~~n~l~-~~~~~~~~l~~L~~L~L~~N 328 (390)
T 3o6n_A 257 YNELEKIMY-----HPFVKMQRLERLYISNNRLVAL-NLYGQPI-PTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHN 328 (390)
T ss_dssp SSCCCEEES-----GGGTTCSSCCEEECCSSCCCEE-ECSSSCC-TTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSS
T ss_pred CCcCCCcCh-----hHccccccCCEEECCCCcCccc-CcccCCC-CCCCEEECCCCcce-ecCccccccCcCCEEECCCC
Confidence 988876532 3577788899999999988764 3334444 57999999999988 56777888999999999999
Q ss_pred cccCccccccccccccCeEEeeccccCcc
Q 039514 395 KLTGPISITFGRLQKLQGLYLASNNLVGS 423 (790)
Q Consensus 395 ~l~~~~~~~~~~l~~L~~L~L~~n~l~~~ 423 (790)
.++... +..+++|+.|++++|++.+.
T Consensus 329 ~i~~~~---~~~~~~L~~L~l~~N~~~~~ 354 (390)
T 3o6n_A 329 SIVTLK---LSTHHTLKNLTLSHNDWDCN 354 (390)
T ss_dssp CCCCCC---CCTTCCCSEEECCSSCEEHH
T ss_pred ccceeC---chhhccCCEEEcCCCCccch
Confidence 988653 66788999999999998753
No 37
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=100.00 E-value=1.7e-34 Score=330.87 Aligned_cols=349 Identities=17% Similarity=0.178 Sum_probs=262.3
Q ss_pred cccCCCCCCCCCCC----ccccccCCCCCcEEEEECCCCCcceeccccCCCCCCCCEEECCCCCCcccCChhhhCCCCCC
Q 039514 29 LLAHNWTSNASVCT----WIGITCDVNSHRVTALDTSQFNLQGTIPSQLGNLSSLTILNLSHNKLSGSVPSSIYTMHTLK 104 (790)
Q Consensus 29 ~~~~~w~~~~~~c~----w~gv~c~~~~~~v~~Ldl~~~~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~ 104 (790)
.+.+ |..+.+||. |.++.|+. ++ +......... + .-..+++++.|++++|.+..+.+..|..+++|+
T Consensus 8 ~l~~-~~~~~~C~~~~~~~~c~~~~~---~i---~~~~~~~~~~-~-~~l~l~~l~~l~l~~~~l~~lp~~~~~~l~~L~ 78 (597)
T 3oja_B 8 NVKP-RQPEYKCIDSNLQYDCVFYDV---HI---DMQTQDVYFG-F-EDITLNNQKIVTFKNSTMRKLPAALLDSFRQVE 78 (597)
T ss_dssp ---C-CCSEECCCCC--CCSEEECSC---EE---CSSCCCCEES-C-SSGGGCCCSEEEESSCEESEECTHHHHHCCCCS
T ss_pred cccC-CCCCCcCcccCcCceeEecCc---ee---cccccccccC-c-ccccCCCceEEEeeCCCCCCcCHHHHccCCCCc
Confidence 3455 887777774 66665552 11 1111111111 1 112356888888888888877777788888888
Q ss_pred EEeCCCCCCcccCCccccCCCCCcEEEccCccCcccCchhhhccCCCCCEEECCCCcCcccCCcCCCCCCCCCeeecccC
Q 039514 105 FLDFTDNQLSGSVSSFVFNMSSIVDIRLTNNRLSGELPKNICNYLPHLKALFLDKNMFHGKIPSALSKCKQLQQLNLQLN 184 (790)
Q Consensus 105 ~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~lp~~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~N 184 (790)
+|+|++|.+++..+..|.++++|++|+|++|.++ .+|...|..+++|++|+|++|.+++.++..|+++++|++|+|++|
T Consensus 79 ~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~Ls~N 157 (597)
T 3oja_B 79 LLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIR-YLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNN 157 (597)
T ss_dssp EEECTTSCCCEECTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred EEECCCCCCCCCChHHhcCCCCCCEEECCCCcCC-CCCHHHHcCCCCCCEEEeeCCCCCCCCHHHhccCCCCCEEEeeCC
Confidence 8888888888888888888888888888888888 566666678888888888888888777777788888888888888
Q ss_pred cccccCcccccccCCCCceecccccccceEEcccccCccccCccccCCCCCcEEEcccCCCcccCCcchhcCCCCcceEe
Q 039514 185 NLSGAIPKEIGNLTMLKGISLLYNKLQEALVLGMNNLVGVLPATIFNMSTLKVLILINNSLSGSLPSRIDLSLPTVEVLI 264 (790)
Q Consensus 185 ~l~~~~~~~~~~l~~L~~L~l~~n~l~~~l~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~~l~~L~~L~ 264 (790)
.+++..|..|+.+++|++|++++|.+.. . .+..+++|+.|++++|.+++. + ..+.|+.|+
T Consensus 158 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~-----------~---~~~~l~~L~~L~l~~n~l~~l-~-----~~~~L~~L~ 217 (597)
T 3oja_B 158 NLERIEDDTFQATTSLQNLQLSSNRLTH-----------V---DLSLIPSLFHANVSYNLLSTL-A-----IPIAVEELD 217 (597)
T ss_dssp CCCBCCTTTTTTCTTCCEEECTTSCCSB-----------C---CGGGCTTCSEEECCSSCCSEE-E-----CCTTCSEEE
T ss_pred cCCCCChhhhhcCCcCcEEECcCCCCCC-----------c---ChhhhhhhhhhhcccCccccc-c-----CCchhheee
Confidence 8888888888888888887766665542 2 245567888888888887632 1 345788888
Q ss_pred ecCCcccccCCccccCCCCCCEEeccCCcccccCcccccCCCCCccccccCCcccCCCCcccccccCCCCCCCCEEEccC
Q 039514 265 LALNRFFGTIPSSITNASKLTVLELGGNTFSGLIPDTIGNLRNLEWLNLSKNSLTSSTSKLSFLSSLANCKKLRSLKLAG 344 (790)
Q Consensus 265 L~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~l~~l~~L~~L~Ls~ 344 (790)
+++|.+....+.. .++|+.|++++|.+++ +..+..+++|+.|+|++|.+.+..+ ..+..+++|+.|+|++
T Consensus 218 ls~n~l~~~~~~~---~~~L~~L~L~~n~l~~--~~~l~~l~~L~~L~Ls~N~l~~~~~-----~~~~~l~~L~~L~Ls~ 287 (597)
T 3oja_B 218 ASHNSINVVRGPV---NVELTILKLQHNNLTD--TAWLLNYPGLVEVDLSYNELEKIMY-----HPFVKMQRLERLYISN 287 (597)
T ss_dssp CCSSCCCEEECSC---CSCCCEEECCSSCCCC--CGGGGGCTTCSEEECCSSCCCEEES-----GGGTTCSSCCEEECTT
T ss_pred ccCCccccccccc---CCCCCEEECCCCCCCC--ChhhccCCCCCEEECCCCccCCCCH-----HHhcCccCCCEEECCC
Confidence 8888876554332 3578899999998886 3668888899999999998887632 3577888899999999
Q ss_pred CCCcccCCchhhhhcccCcEEEeecCcCcccCchhhhccCCcceeeeccccccCccccccccccccCeEEeeccccCcc
Q 039514 345 NPLDGFLPSSIGNLSKSLETLVIANCSISGNIPQAISNLSNLLTLVLERNKLTGPISITFGRLQKLQGLYLASNNLVGS 423 (790)
Q Consensus 345 n~l~~~~p~~~~~l~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~ 423 (790)
|.+.+. |..+..+ ++|+.|++++|.++ .+|..+..+++|+.|++++|.+.+.. +..+++|+.|++++|++.+.
T Consensus 288 N~l~~l-~~~~~~l-~~L~~L~Ls~N~l~-~i~~~~~~l~~L~~L~L~~N~l~~~~---~~~~~~L~~L~l~~N~~~~~ 360 (597)
T 3oja_B 288 NRLVAL-NLYGQPI-PTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVTLK---LSTHHTLKNLTLSHNDWDCN 360 (597)
T ss_dssp SCCCEE-ECSSSCC-TTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCCCC---CCTTCCCSEEECCSSCEEHH
T ss_pred CCCCCC-CcccccC-CCCcEEECCCCCCC-ccCcccccCCCCCEEECCCCCCCCcC---hhhcCCCCEEEeeCCCCCCh
Confidence 988864 4444444 58999999999998 57778899999999999999998753 66788999999999999754
No 38
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=4.9e-34 Score=299.30 Aligned_cols=254 Identities=33% Similarity=0.532 Sum_probs=217.4
Q ss_pred cCcEEEeecCcCcc--cCchhhhccCCcceeeecc-ccccCccccccccccccCeEEeeccccCccCCccccccccccce
Q 039514 361 SLETLVIANCSISG--NIPQAISNLSNLLTLVLER-NKLTGPISITFGRLQKLQGLYLASNNLVGSFPDELCHIGRLAEL 437 (790)
Q Consensus 361 ~L~~L~l~~n~l~~--~~p~~~~~l~~L~~L~L~~-N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 437 (790)
+++.|++++|.+.+ .+|..+..+++|++|++++ |.+.+..|..|..+++|++|++++|.+.+.+|..+..+++|++|
T Consensus 51 ~l~~L~L~~~~l~~~~~~~~~l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L 130 (313)
T 1ogq_A 51 RVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTL 130 (313)
T ss_dssp CEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEE
T ss_pred eEEEEECCCCCccCCcccChhHhCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEE
Confidence 46777777777776 6777777777777777774 77777777777777888888888888877777777788888888
Q ss_pred ecccCcccccCCccccCCCCCCeeeccCCccccccCcccccCC-CCceEeccCCcccccccccccccccCceEeCcCCcc
Q 039514 438 ALLDNRHSGSIPSCVSNLTSLRYLYLGSNRFTFVIPSTFWSLK-DILFFDFSSNFLVGTLSFDIGNLKVLLGINLSENNL 516 (790)
Q Consensus 438 ~l~~n~~~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~-~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l 516 (790)
++++|.+.+.+|..+..+++|++|++++|++++.+|..+..++ .|+.|++++|.+++..|..+..++ |++|++++|++
T Consensus 131 ~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N~l 209 (313)
T 1ogq_A 131 DFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNML 209 (313)
T ss_dssp ECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-CSEEECCSSEE
T ss_pred eCCCCccCCcCChHHhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc-ccEEECcCCcc
Confidence 8888888777888888888888888888888878888888887 888888888888888888888887 99999999999
Q ss_pred cccCcccccCCcccCeeeCCCCcccccCCccccCCCCCCEEECCCCcCcccCCccccccCCCCeEeCCCCcceecCCCCc
Q 039514 517 SGDMPATIGGLKDLQFMDLAYNRLEGPIPESFGDLTSLEVLNLSKNKISGSIPKSMEKLFYLRELNLSFNELEGEIPSGG 596 (790)
Q Consensus 517 ~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 596 (790)
++..|..|..+++|+.|+|++|++++.+|. +..+++|++|++++|++++.+|..+..+++|++|++++|+++|.+|..+
T Consensus 210 ~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~~ 288 (313)
T 1ogq_A 210 EGDASVLFGSDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGG 288 (313)
T ss_dssp EECCGGGCCTTSCCSEEECCSSEECCBGGG-CCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCST
T ss_pred cCcCCHHHhcCCCCCEEECCCCceeeecCc-ccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccccCCCCc
Confidence 999999999999999999999999977666 7889999999999999999999999999999999999999999999988
Q ss_pred ccCCCCcccccCCcCCCCCC
Q 039514 597 IFANFTAESFMGNELLCGLP 616 (790)
Q Consensus 597 ~~~~~~~~~~~~n~~l~~~p 616 (790)
.+..+....+.+|+++|+.|
T Consensus 289 ~l~~L~~l~l~~N~~lc~~p 308 (313)
T 1ogq_A 289 NLQRFDVSAYANNKCLCGSP 308 (313)
T ss_dssp TGGGSCGGGTCSSSEEESTT
T ss_pred cccccChHHhcCCCCccCCC
Confidence 88889999999999999976
No 39
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=100.00 E-value=2.6e-33 Score=304.35 Aligned_cols=335 Identities=21% Similarity=0.216 Sum_probs=219.6
Q ss_pred CCCCcEEEcccCCCcccCCcchhcCCCCcceEeecCCcccccCCccccCCCCCCEEeccCCcccccCcccccCCCCCccc
Q 039514 232 MSTLKVLILINNSLSGSLPSRIDLSLPTVEVLILALNRFFGTIPSSITNASKLTVLELGGNTFSGLIPDTIGNLRNLEWL 311 (790)
Q Consensus 232 l~~L~~L~L~~n~l~~~~p~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 311 (790)
+++++.|++++|.+. .+|...+..+++|+.|++++|.+.+..+..|..+++|++|++++|.+++..|..|..+++|++|
T Consensus 44 l~~l~~l~l~~~~l~-~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 122 (390)
T 3o6n_A 44 LNNQKIVTFKNSTMR-KLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVL 122 (390)
T ss_dssp GCCCSEEEEESCEES-EECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred cCCceEEEecCCchh-hCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEE
Confidence 456677777776665 4555544456666666666666665555566666666666666666665555555666666666
Q ss_pred cccCCcccCCCCcccccccCCCCCCCCEEEccCCCCcccCCchhhhhcccCcEEEeecCcCcccCchhhhccCCcceeee
Q 039514 312 NLSKNSLTSSTSKLSFLSSLANCKKLRSLKLAGNPLDGFLPSSIGNLSKSLETLVIANCSISGNIPQAISNLSNLLTLVL 391 (790)
Q Consensus 312 ~Ls~n~l~~~~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L 391 (790)
++++|.++.++.. .+..+++|++|++++|.+. +..|..+..+++|++|++
T Consensus 123 ~L~~n~l~~l~~~-----~~~~l~~L~~L~L~~n~l~-------------------------~~~~~~~~~l~~L~~L~l 172 (390)
T 3o6n_A 123 VLERNDLSSLPRG-----IFHNTPKLTTLSMSNNNLE-------------------------RIEDDTFQATTSLQNLQL 172 (390)
T ss_dssp ECCSSCCCCCCTT-----TTTTCTTCCEEECCSSCCC-------------------------BCCTTTTSSCTTCCEEEC
T ss_pred ECCCCccCcCCHH-----HhcCCCCCcEEECCCCccC-------------------------ccChhhccCCCCCCEEEC
Confidence 6666655544321 1344445555555555444 444444455555555555
Q ss_pred ccccccCccccccccccccCeEEeeccccCccCCccccccccccceecccCcccccCCccccCCCCCCeeeccCCccccc
Q 039514 392 ERNKLTGPISITFGRLQKLQGLYLASNNLVGSFPDELCHIGRLAELALLDNRHSGSIPSCVSNLTSLRYLYLGSNRFTFV 471 (790)
Q Consensus 392 ~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~L~~N~l~~~ 471 (790)
++|.+++. .+..+++|+.|++++|.+.+. ...++|+.|++++|.+... |. ...++|+.|++++|.+++.
T Consensus 173 ~~n~l~~~---~~~~l~~L~~L~l~~n~l~~~-----~~~~~L~~L~l~~n~l~~~-~~--~~~~~L~~L~l~~n~l~~~ 241 (390)
T 3o6n_A 173 SSNRLTHV---DLSLIPSLFHANVSYNLLSTL-----AIPIAVEELDASHNSINVV-RG--PVNVELTILKLQHNNLTDT 241 (390)
T ss_dssp CSSCCSBC---CGGGCTTCSEEECCSSCCSEE-----ECCSSCSEEECCSSCCCEE-EC--CCCSSCCEEECCSSCCCCC
T ss_pred CCCcCCcc---ccccccccceeeccccccccc-----CCCCcceEEECCCCeeeec-cc--cccccccEEECCCCCCccc
Confidence 55554433 133445555555555554421 2223555666666655433 21 1236788888888888764
Q ss_pred cCcccccCCCCceEeccCCcccccccccccccccCceEeCcCCcccccCcccccCCcccCeeeCCCCcccccCCccccCC
Q 039514 472 IPSTFWSLKDILFFDFSSNFLVGTLSFDIGNLKVLLGINLSENNLSGDMPATIGGLKDLQFMDLAYNRLEGPIPESFGDL 551 (790)
Q Consensus 472 ~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 551 (790)
..+..+++|+.|++++|.+++..+..+..+++|++|+|++|++++ +|..+..+++|++|+|++|++++ +|..+..+
T Consensus 242 --~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~l 317 (390)
T 3o6n_A 242 --AWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLLH-VERNQPQF 317 (390)
T ss_dssp --GGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECCSSCCCE-EECSSSCCTTCCEEECCSSCCCC-CGGGHHHH
T ss_pred --HHHcCCCCccEEECCCCcCCCcChhHccccccCCEEECCCCcCcc-cCcccCCCCCCCEEECCCCccee-cCcccccc
Confidence 567788888888888888888888888889999999999999985 45667789999999999999984 56678888
Q ss_pred CCCCEEECCCCcCcccCCccccccCCCCeEeCCCCcceecCCCCcccCCCCcccccCCcCCCCCC
Q 039514 552 TSLEVLNLSKNKISGSIPKSMEKLFYLRELNLSFNELEGEIPSGGIFANFTAESFMGNELLCGLP 616 (790)
Q Consensus 552 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~~~~~n~~l~~~p 616 (790)
++|++|++++|+++.. | +..+++|+.|++++|++.+.... ..+..+....+.+++..|..+
T Consensus 318 ~~L~~L~L~~N~i~~~-~--~~~~~~L~~L~l~~N~~~~~~~~-~~~~~~~~~~~~~~~~~c~~~ 378 (390)
T 3o6n_A 318 DRLENLYLDHNSIVTL-K--LSTHHTLKNLTLSHNDWDCNSLR-ALFRNVARPAVDDADQHCKID 378 (390)
T ss_dssp TTCSEEECCSSCCCCC-C--CCTTCCCSEEECCSSCEEHHHHH-HHTTTCCTTTBCCCCSCCCTT
T ss_pred CcCCEEECCCCcccee-C--chhhccCCEEEcCCCCccchhHH-HHHHHHHhhcccccCceeccc
Confidence 9999999999999854 3 67788999999999999875332 234445555566676677654
No 40
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=100.00 E-value=2.7e-34 Score=303.02 Aligned_cols=275 Identities=19% Similarity=0.271 Sum_probs=190.8
Q ss_pred cCCCCHHHHHHHHHHHhhcCCCCCccccCCC----CCCCCCCCccccccCC--------CCCcEEEEECCCCCcceeccc
Q 039514 4 ASSNITTDQQALLALKDHIISDPTNLLAHNW----TSNASVCTWIGITCDV--------NSHRVTALDTSQFNLQGTIPS 71 (790)
Q Consensus 4 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~w----~~~~~~c~w~gv~c~~--------~~~~v~~Ldl~~~~l~~~~~~ 71 (790)
+++...+|++||++||+.+..|+.+.+.. | ....++|.|.|+.|+. ...+|+.||++++.++ .+|+
T Consensus 21 ~~~~~~~~~~aLl~~k~~~~~~~~~~~~~-w~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~~~l~~L~L~~n~l~-~lp~ 98 (328)
T 4fcg_A 21 GSTALRPYHDVLSQWQRHYNADRNRWHSA-WRQANSNNPQIETRTGRALKATADLLEDATQPGRVALELRSVPLP-QFPD 98 (328)
T ss_dssp --CCCCCHHHHHHHHHHHHHHCCTTHHHH-HHHHTTTCTTSCCSHHHHHHHHHHHHHHHTSTTCCEEEEESSCCS-SCCS
T ss_pred ccccCchHHHHHHHHHHhccCCchhhhhh-hcccccccccccccCCcchhhhHHHHhcccccceeEEEccCCCch-hcCh
Confidence 34556789999999999987777777776 9 4567899999999952 2367888999988887 6788
Q ss_pred cCCCCCCCCEEECCCCCCcccCChhhhCCCCCCEEeCCCCCCcccCCccccCCCCCcEEEccCccCcccCchhhh-----
Q 039514 72 QLGNLSSLTILNLSHNKLSGSVPSSIYTMHTLKFLDFTDNQLSGSVSSFVFNMSSIVDIRLTNNRLSGELPKNIC----- 146 (790)
Q Consensus 72 ~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~lp~~~~----- 146 (790)
.++.+++|++|+|++|.++ .+|..|..+++|++|+|++|+++ .+|..+.++++|++|++++|++.+.+|..+.
T Consensus 99 ~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~~n~~~~~~p~~~~~~~~~ 176 (328)
T 4fcg_A 99 QAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIRACPELTELPEPLASTDAS 176 (328)
T ss_dssp CGGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEEEETTCCCCCSCSEEEC-C
T ss_pred hhhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEECCCCCCccccChhHhhccch
Confidence 8888889999999998888 77888888888888888888888 6677888888888888888887778877652
Q ss_pred ---ccCCCCCEEECCCCcCcccCCcCCCCCCCCCeeecccCcccccCcccccccCCCCceecccccccceEEcccccCcc
Q 039514 147 ---NYLPHLKALFLDKNMFHGKIPSALSKCKQLQQLNLQLNNLSGAIPKEIGNLTMLKGISLLYNKLQEALVLGMNNLVG 223 (790)
Q Consensus 147 ---~~l~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~l~l~~n~l~~ 223 (790)
..+++|++|+|++|.++ .+|..++++++|++|+|++|.+++ +
T Consensus 177 ~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~-l--------------------------------- 221 (328)
T 4fcg_A 177 GEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSA-L--------------------------------- 221 (328)
T ss_dssp CCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCC-C---------------------------------
T ss_pred hhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCc-C---------------------------------
Confidence 12455555555555554 444445555555555555555542 2
Q ss_pred ccCccccCCCCCcEEEcccCCCcccCCcchhcCCCCcceEeecCCcccccCCccccCCCCCCEEeccCCcccccCccccc
Q 039514 224 VLPATIFNMSTLKVLILINNSLSGSLPSRIDLSLPTVEVLILALNRFFGTIPSSITNASKLTVLELGGNTFSGLIPDTIG 303 (790)
Q Consensus 224 ~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~ 303 (790)
|..+..+++|++|++++|.+.+.+|..+. .+++|+.|++++|.+.+.+|..+.++++|+.|++++|.+.+.+|..+.
T Consensus 222 --~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~-~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~iP~~l~ 298 (328)
T 4fcg_A 222 --GPAIHHLPKLEELDLRGCTALRNYPPIFG-GRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIA 298 (328)
T ss_dssp --CGGGGGCTTCCEEECTTCTTCCBCCCCTT-CCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCCCGGGG
T ss_pred --chhhccCCCCCEEECcCCcchhhhHHHhc-CCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCchhhccHHHh
Confidence 33344445555555555555444444333 355555555555555556666666777777777777777777777777
Q ss_pred CCCCCccccccCCcccC
Q 039514 304 NLRNLEWLNLSKNSLTS 320 (790)
Q Consensus 304 ~l~~L~~L~Ls~n~l~~ 320 (790)
.+++|+.+++..+.+..
T Consensus 299 ~L~~L~~l~l~~~~~~~ 315 (328)
T 4fcg_A 299 QLPANCIILVPPHLQAQ 315 (328)
T ss_dssp GSCTTCEEECCGGGSCC
T ss_pred hccCceEEeCCHHHHHH
Confidence 77777777777665544
No 41
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=100.00 E-value=3.5e-33 Score=319.94 Aligned_cols=335 Identities=21% Similarity=0.203 Sum_probs=221.8
Q ss_pred CCCCcEEEcccCCCcccCCcchhcCCCCcceEeecCCcccccCCccccCCCCCCEEeccCCcccccCcccccCCCCCccc
Q 039514 232 MSTLKVLILINNSLSGSLPSRIDLSLPTVEVLILALNRFFGTIPSSITNASKLTVLELGGNTFSGLIPDTIGNLRNLEWL 311 (790)
Q Consensus 232 l~~L~~L~L~~n~l~~~~p~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 311 (790)
+.+++.+++++|.+. .+|..++..+++|+.|++++|.+.+..|..|..+++|++|++++|.+++..|..|+.+++|++|
T Consensus 50 l~~l~~l~l~~~~l~-~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 128 (597)
T 3oja_B 50 LNNQKIVTFKNSTMR-KLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVL 128 (597)
T ss_dssp GCCCSEEEESSCEES-EECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred CCCceEEEeeCCCCC-CcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEE
Confidence 455666666666554 4444444445555555555555555555555555555555555555555555555555555555
Q ss_pred cccCCcccCCCCcccccccCCCCCCCCEEEccCCCCcccCCchhhhhcccCcEEEeecCcCcccCchhhhccCCcceeee
Q 039514 312 NLSKNSLTSSTSKLSFLSSLANCKKLRSLKLAGNPLDGFLPSSIGNLSKSLETLVIANCSISGNIPQAISNLSNLLTLVL 391 (790)
Q Consensus 312 ~Ls~n~l~~~~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L 391 (790)
+|++|.++.++ +..+..+ ++|++|++++|.+++..|..|..+++|++|++
T Consensus 129 ~L~~n~l~~l~-----------------------------~~~~~~l-~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 178 (597)
T 3oja_B 129 VLERNDLSSLP-----------------------------RGIFHNT-PKLTTLSMSNNNLERIEDDTFQATTSLQNLQL 178 (597)
T ss_dssp ECCSSCCCCCC-----------------------------TTTTTTC-TTCCEEECCSSCCCBCCTTTTTTCTTCCEEEC
T ss_pred EeeCCCCCCCC-----------------------------HHHhccC-CCCCEEEeeCCcCCCCChhhhhcCCcCcEEEC
Confidence 55555554433 2223333 34555555555555555555555555555555
Q ss_pred ccccccCccccccccccccCeEEeeccccCccCCccccccccccceecccCcccccCCccccCCCCCCeeeccCCccccc
Q 039514 392 ERNKLTGPISITFGRLQKLQGLYLASNNLVGSFPDELCHIGRLAELALLDNRHSGSIPSCVSNLTSLRYLYLGSNRFTFV 471 (790)
Q Consensus 392 ~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~L~~N~l~~~ 471 (790)
++|.+++.. +..+++|+.|++++|.+.+. ...+.|+.|++++|.+....+.. .++|+.|+|++|.+++
T Consensus 179 ~~N~l~~~~---~~~l~~L~~L~l~~n~l~~l-----~~~~~L~~L~ls~n~l~~~~~~~---~~~L~~L~L~~n~l~~- 246 (597)
T 3oja_B 179 SSNRLTHVD---LSLIPSLFHANVSYNLLSTL-----AIPIAVEELDASHNSINVVRGPV---NVELTILKLQHNNLTD- 246 (597)
T ss_dssp TTSCCSBCC---GGGCTTCSEEECCSSCCSEE-----ECCTTCSEEECCSSCCCEEECSC---CSCCCEEECCSSCCCC-
T ss_pred cCCCCCCcC---hhhhhhhhhhhcccCccccc-----cCCchhheeeccCCccccccccc---CCCCCEEECCCCCCCC-
Confidence 555555432 33445556666666555431 22345666666666655332221 2578888898888886
Q ss_pred cCcccccCCCCceEeccCCcccccccccccccccCceEeCcCCcccccCcccccCCcccCeeeCCCCcccccCCccccCC
Q 039514 472 IPSTFWSLKDILFFDFSSNFLVGTLSFDIGNLKVLLGINLSENNLSGDMPATIGGLKDLQFMDLAYNRLEGPIPESFGDL 551 (790)
Q Consensus 472 ~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 551 (790)
+..+..+++|+.|++++|.+.+..|..++.+++|+.|+|++|.+++ +|..+..+++|+.|+|++|.++ .+|..+..+
T Consensus 247 -~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~l 323 (597)
T 3oja_B 247 -TAWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQF 323 (597)
T ss_dssp -CGGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECTTSCCCE-EECSSSCCTTCCEEECCSSCCC-CCGGGHHHH
T ss_pred -ChhhccCCCCCEEECCCCccCCCCHHHhcCccCCCEEECCCCCCCC-CCcccccCCCCcEEECCCCCCC-ccCcccccC
Confidence 4678888899999999999988888889999999999999999986 4667788999999999999999 567778889
Q ss_pred CCCCEEECCCCcCcccCCccccccCCCCeEeCCCCcceecCCCCcccCCCCcccccCCcCCCCCC
Q 039514 552 TSLEVLNLSKNKISGSIPKSMEKLFYLRELNLSFNELEGEIPSGGIFANFTAESFMGNELLCGLP 616 (790)
Q Consensus 552 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~~~~~n~~l~~~p 616 (790)
++|++|+|++|.+++. | +..+++|+.|++++|++.|..+. ..+..+....+.++...|+.+
T Consensus 324 ~~L~~L~L~~N~l~~~-~--~~~~~~L~~L~l~~N~~~~~~~~-~~~~~~~~~~~~~~~~~C~~~ 384 (597)
T 3oja_B 324 DRLENLYLDHNSIVTL-K--LSTHHTLKNLTLSHNDWDCNSLR-ALFRNVARPAVDDADQHCKID 384 (597)
T ss_dssp TTCSEEECCSSCCCCC-C--CCTTCCCSEEECCSSCEEHHHHH-HHTTTCCTTTBCCCCCCCCTT
T ss_pred CCCCEEECCCCCCCCc-C--hhhcCCCCEEEeeCCCCCChhHH-HHHHHHhhhccccccccCCcc
Confidence 9999999999999864 3 66788999999999999876432 345556666677888888754
No 42
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=100.00 E-value=2.2e-32 Score=292.17 Aligned_cols=307 Identities=24% Similarity=0.340 Sum_probs=190.0
Q ss_pred ccCCCCCcEEEcccCCCcccCCcchhcCCCCcceEeecCCcccccCCccccCCCCCCEEeccCCcccccCcccccCCCCC
Q 039514 229 IFNMSTLKVLILINNSLSGSLPSRIDLSLPTVEVLILALNRFFGTIPSSITNASKLTVLELGGNTFSGLIPDTIGNLRNL 308 (790)
Q Consensus 229 ~~~l~~L~~L~L~~n~l~~~~p~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L 308 (790)
+..+++|+.|++++|.+. .++. ...+++|+.|++++|.+.+..+ +..+++|++|++++|.+++. +.|..+++|
T Consensus 40 ~~~l~~L~~L~l~~~~i~-~~~~--~~~~~~L~~L~l~~n~i~~~~~--~~~l~~L~~L~L~~n~i~~~--~~~~~l~~L 112 (347)
T 4fmz_A 40 QEELESITKLVVAGEKVA-SIQG--IEYLTNLEYLNLNGNQITDISP--LSNLVKLTNLYIGTNKITDI--SALQNLTNL 112 (347)
T ss_dssp HHHHTTCSEEECCSSCCC-CCTT--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCC--GGGTTCTTC
T ss_pred chhcccccEEEEeCCccc-cchh--hhhcCCccEEEccCCccccchh--hhcCCcCCEEEccCCcccCc--hHHcCCCcC
Confidence 345667777777777765 3332 1234555555555555443322 44555555555555555432 234455555
Q ss_pred ccccccCCcccCCCCcccccccCCCCCCCCEEEccCCCCcccCCchhhhhcccCcEEEeecCcCcccCchhhhccCCcce
Q 039514 309 EWLNLSKNSLTSSTSKLSFLSSLANCKKLRSLKLAGNPLDGFLPSSIGNLSKSLETLVIANCSISGNIPQAISNLSNLLT 388 (790)
Q Consensus 309 ~~L~Ls~n~l~~~~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~ 388 (790)
++|++++|.+...+ .+..+++ |++|++++|.....++ .+..+++|++
T Consensus 113 ~~L~l~~n~i~~~~-------~~~~l~~-------------------------L~~L~l~~n~~~~~~~-~~~~l~~L~~ 159 (347)
T 4fmz_A 113 RELYLNEDNISDIS-------PLANLTK-------------------------MYSLNLGANHNLSDLS-PLSNMTGLNY 159 (347)
T ss_dssp SEEECTTSCCCCCG-------GGTTCTT-------------------------CCEEECTTCTTCCCCG-GGTTCTTCCE
T ss_pred CEEECcCCcccCch-------hhccCCc-------------------------eeEEECCCCCCccccc-chhhCCCCcE
Confidence 55555555544332 1334444 5555555553332222 2455555555
Q ss_pred eeeccccccCccccccccccccCeEEeeccccCccCCccccccccccceecccCcccccCCccccCCCCCCeeeccCCcc
Q 039514 389 LVLERNKLTGPISITFGRLQKLQGLYLASNNLVGSFPDELCHIGRLAELALLDNRHSGSIPSCVSNLTSLRYLYLGSNRF 468 (790)
Q Consensus 389 L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~L~~N~l 468 (790)
|++++|.+.+..+ +..+++|+.|++++|.+.+..+ +..+++|+.|++.+|.+.+..+ +..+++|++|++++|++
T Consensus 160 L~l~~~~~~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n~l 233 (347)
T 4fmz_A 160 LTVTESKVKDVTP--IANLTDLYSLSLNYNQIEDISP--LASLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKI 233 (347)
T ss_dssp EECCSSCCCCCGG--GGGCTTCSEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCC
T ss_pred EEecCCCcCCchh--hccCCCCCEEEccCCccccccc--ccCCCccceeecccCCCCCCch--hhcCCcCCEEEccCCcc
Confidence 5555555554333 4455555555555555543222 4555556666666665554332 56667777777777777
Q ss_pred ccccCcccccCCCCceEeccCCcccccccccccccccCceEeCcCCcccccCcccccCCcccCeeeCCCCcccccCCccc
Q 039514 469 TFVIPSTFWSLKDILFFDFSSNFLVGTLSFDIGNLKVLLGINLSENNLSGDMPATIGGLKDLQFMDLAYNRLEGPIPESF 548 (790)
Q Consensus 469 ~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 548 (790)
+...+ +..+++|+.|++++|.+++. ..+..+++|++|++++|++++. ..+..+++|+.|++++|++++..|..+
T Consensus 234 ~~~~~--~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~L~~n~l~~~~~~~l 307 (347)
T 4fmz_A 234 TDLSP--LANLSQLTWLEIGTNQISDI--NAVKDLTKLKMLNVGSNQISDI--SVLNNLSQLNSLFLNNNQLGNEDMEVI 307 (347)
T ss_dssp CCCGG--GTTCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCGGGHHHH
T ss_pred CCCcc--hhcCCCCCEEECCCCccCCC--hhHhcCCCcCEEEccCCccCCC--hhhcCCCCCCEEECcCCcCCCcChhHh
Confidence 76544 66777777777777777654 3467788888888888888764 457888899999999999988888888
Q ss_pred cCCCCCCEEECCCCcCcccCCccccccCCCCeEeCCCCcce
Q 039514 549 GDLTSLEVLNLSKNKISGSIPKSMEKLFYLRELNLSFNELE 589 (790)
Q Consensus 549 ~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 589 (790)
..+++|++|++++|++++..| +..+++|++|++++|+++
T Consensus 308 ~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~N~i~ 346 (347)
T 4fmz_A 308 GGLTNLTTLFLSQNHITDIRP--LASLSKMDSADFANQVIK 346 (347)
T ss_dssp HTCTTCSEEECCSSSCCCCGG--GGGCTTCSEESSSCC---
T ss_pred hccccCCEEEccCCccccccC--hhhhhccceeehhhhccc
Confidence 889999999999999887665 788889999999999875
No 43
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=100.00 E-value=1.3e-31 Score=286.35 Aligned_cols=302 Identities=24% Similarity=0.391 Sum_probs=163.3
Q ss_pred cEEEEECCCCCcceeccccCCCCCCCCEEECCCCCCcccCChhhhCCCCCCEEeCCCCCCcccCCccccCCCCCcEEEcc
Q 039514 54 RVTALDTSQFNLQGTIPSQLGNLSSLTILNLSHNKLSGSVPSSIYTMHTLKFLDFTDNQLSGSVSSFVFNMSSIVDIRLT 133 (790)
Q Consensus 54 ~v~~Ldl~~~~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~ 133 (790)
+++.|+++++.+... | .+..+++|++|++++|.+++..+ |..+++|++|++++|+++.. ..+.++++|++|+++
T Consensus 45 ~L~~L~l~~~~i~~~-~-~~~~~~~L~~L~l~~n~i~~~~~--~~~l~~L~~L~L~~n~i~~~--~~~~~l~~L~~L~l~ 118 (347)
T 4fmz_A 45 SITKLVVAGEKVASI-Q-GIEYLTNLEYLNLNGNQITDISP--LSNLVKLTNLYIGTNKITDI--SALQNLTNLRELYLN 118 (347)
T ss_dssp TCSEEECCSSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCC--GGGTTCTTCSEEECT
T ss_pred cccEEEEeCCccccc-h-hhhhcCCccEEEccCCccccchh--hhcCCcCCEEEccCCcccCc--hHHcCCCcCCEEECc
Confidence 355555655555432 2 35555566666666665554333 55555666666666555532 235555555555555
Q ss_pred CccCcccCchhhhccCCCCCEEECCCCcCcccCCcCCCCCCCCCeeecccCcccccCcccccccCCCCceecccccccce
Q 039514 134 NNRLSGELPKNICNYLPHLKALFLDKNMFHGKIPSALSKCKQLQQLNLQLNNLSGAIPKEIGNLTMLKGISLLYNKLQEA 213 (790)
Q Consensus 134 ~N~l~~~lp~~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~ 213 (790)
+|.++ .+|. +..+++|++|++++|.....++ .+..+++|++|++++|.+....+ +..++
T Consensus 119 ~n~i~-~~~~--~~~l~~L~~L~l~~n~~~~~~~-~~~~l~~L~~L~l~~~~~~~~~~--~~~l~--------------- 177 (347)
T 4fmz_A 119 EDNIS-DISP--LANLTKMYSLNLGANHNLSDLS-PLSNMTGLNYLTVTESKVKDVTP--IANLT--------------- 177 (347)
T ss_dssp TSCCC-CCGG--GTTCTTCCEEECTTCTTCCCCG-GGTTCTTCCEEECCSSCCCCCGG--GGGCT---------------
T ss_pred CCccc-Cchh--hccCCceeEEECCCCCCccccc-chhhCCCCcEEEecCCCcCCchh--hccCC---------------
Confidence 55555 3333 3445555555555554333222 25555555555555555543222 44444
Q ss_pred EEcccccCccccCccccCCCCCcEEEcccCCCcccCCcchhcCCCCcceEeecCCcccccCCccccCCCCCCEEeccCCc
Q 039514 214 LVLGMNNLVGVLPATIFNMSTLKVLILINNSLSGSLPSRIDLSLPTVEVLILALNRFFGTIPSSITNASKLTVLELGGNT 293 (790)
Q Consensus 214 l~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~l~~n~ 293 (790)
+|+.|++++|.+.+ ++. ...++.|+.+++++|.+.+..+ +..+++|+.|++++|.
T Consensus 178 --------------------~L~~L~l~~n~l~~-~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n~ 232 (347)
T 4fmz_A 178 --------------------DLYSLSLNYNQIED-ISP--LASLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNK 232 (347)
T ss_dssp --------------------TCSEEECTTSCCCC-CGG--GGGCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSC
T ss_pred --------------------CCCEEEccCCcccc-ccc--ccCCCccceeecccCCCCCCch--hhcCCcCCEEEccCCc
Confidence 44444444444431 111 1233444444444444433322 4556667777777776
Q ss_pred ccccCcccccCCCCCccccccCCcccCCCCcccccccCCCCCCCCEEEccCCCCcccCCchhhhhcccCcEEEeecCcCc
Q 039514 294 FSGLIPDTIGNLRNLEWLNLSKNSLTSSTSKLSFLSSLANCKKLRSLKLAGNPLDGFLPSSIGNLSKSLETLVIANCSIS 373 (790)
Q Consensus 294 l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~~L~~L~l~~n~l~ 373 (790)
+++..+ +..+++|++|++++|.++.. ..+..+++|++|++++|.+.+. +.+..+ ++|++|++++|.++
T Consensus 233 l~~~~~--~~~l~~L~~L~l~~n~l~~~-------~~~~~l~~L~~L~l~~n~l~~~--~~~~~l-~~L~~L~L~~n~l~ 300 (347)
T 4fmz_A 233 ITDLSP--LANLSQLTWLEIGTNQISDI-------NAVKDLTKLKMLNVGSNQISDI--SVLNNL-SQLNSLFLNNNQLG 300 (347)
T ss_dssp CCCCGG--GTTCTTCCEEECCSSCCCCC-------GGGTTCTTCCEEECCSSCCCCC--GGGGGC-TTCSEEECCSSCCC
T ss_pred cCCCcc--hhcCCCCCEEECCCCccCCC-------hhHhcCCCcCEEEccCCccCCC--hhhcCC-CCCCEEECcCCcCC
Confidence 665433 66666777777777766653 2355566667777777666643 233333 46777777777776
Q ss_pred ccCchhhhccCCcceeeeccccccCccccccccccccCeEEeeccccC
Q 039514 374 GNIPQAISNLSNLLTLVLERNKLTGPISITFGRLQKLQGLYLASNNLV 421 (790)
Q Consensus 374 ~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~ 421 (790)
+..|..+..+++|++|++++|.+++..+ +..+++|++|++++|+++
T Consensus 301 ~~~~~~l~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~N~i~ 346 (347)
T 4fmz_A 301 NEDMEVIGGLTNLTTLFLSQNHITDIRP--LASLSKMDSADFANQVIK 346 (347)
T ss_dssp GGGHHHHHTCTTCSEEECCSSSCCCCGG--GGGCTTCSEESSSCC---
T ss_pred CcChhHhhccccCCEEEccCCccccccC--hhhhhccceeehhhhccc
Confidence 6666666677777777777777666554 556666666666666653
No 44
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.97 E-value=8.3e-31 Score=277.81 Aligned_cols=287 Identities=19% Similarity=0.252 Sum_probs=185.8
Q ss_pred EEEEECCCCCcceeccccCCCCCCCCEEECCCCCCcccCChhhhCCCCCCEEeCCCCCCcccCCccccCCCCCcEEEccC
Q 039514 55 VTALDTSQFNLQGTIPSQLGNLSSLTILNLSHNKLSGSVPSSIYTMHTLKFLDFTDNQLSGSVSSFVFNMSSIVDIRLTN 134 (790)
Q Consensus 55 v~~Ldl~~~~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~ 134 (790)
++.++++++.++ .+|..+. ++|++|+|++|.+.+..+..|..+++|++|+|++|++++..|..|.++++|++|++++
T Consensus 35 l~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~ 111 (332)
T 2ft3_A 35 LRVVQCSDLGLK-AVPKEIS--PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISK 111 (332)
T ss_dssp TTEEECCSSCCS-SCCSCCC--TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECCS
T ss_pred CCEEECCCCCcc-ccCCCCC--CCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECCC
Confidence 345778888876 5677664 6899999999999988889999999999999999999999899999999999999999
Q ss_pred ccCcccCchhhhccCCCCCEEECCCCcCcccCCcCCCCCCCCCeeecccCcccc--cCcccccccCCCCceecccccccc
Q 039514 135 NRLSGELPKNICNYLPHLKALFLDKNMFHGKIPSALSKCKQLQQLNLQLNNLSG--AIPKEIGNLTMLKGISLLYNKLQE 212 (790)
Q Consensus 135 N~l~~~lp~~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~--~~~~~~~~l~~L~~L~l~~n~l~~ 212 (790)
|.++ .+|..++ ++|++|++++|.+++..+..|.++++|++|++++|.++. ..+..+..+ +|++|++++|++..
T Consensus 112 n~l~-~l~~~~~---~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~~ 186 (332)
T 2ft3_A 112 NHLV-EIPPNLP---SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLTG 186 (332)
T ss_dssp SCCC-SCCSSCC---TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCSS
T ss_pred CcCC-ccCcccc---ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcCCCCCc
Confidence 9998 8888764 789999999999998777788999999999999998853 555666655 66665555554432
Q ss_pred eEEcccccCccccCccccCCCCCcEEEcccCCCcccCCcchhcCCCCcceEeecCCcccccCCccccCCCCCCEEeccCC
Q 039514 213 ALVLGMNNLVGVLPATIFNMSTLKVLILINNSLSGSLPSRIDLSLPTVEVLILALNRFFGTIPSSITNASKLTVLELGGN 292 (790)
Q Consensus 213 ~l~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~l~~n 292 (790)
+|..+. ++ |+.|++++|.+.+..+..+..+++|+.|++++|
T Consensus 187 ------------l~~~~~--~~-------------------------L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N 227 (332)
T 2ft3_A 187 ------------IPKDLP--ET-------------------------LNELHLDHNKIQAIELEDLLRYSKLYRLGLGHN 227 (332)
T ss_dssp ------------CCSSSC--SS-------------------------CSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSS
T ss_pred ------------cCcccc--CC-------------------------CCEEECCCCcCCccCHHHhcCCCCCCEEECCCC
Confidence 222221 23 344444444444444445555556666666666
Q ss_pred cccccCcccccCCCCCccccccCCcccCCCCcccccccCCCCCCCCEEEccCCCCcccCCchhhhh-----cccCcEEEe
Q 039514 293 TFSGLIPDTIGNLRNLEWLNLSKNSLTSSTSKLSFLSSLANCKKLRSLKLAGNPLDGFLPSSIGNL-----SKSLETLVI 367 (790)
Q Consensus 293 ~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l-----~~~L~~L~l 367 (790)
.+++..+..|..+++|++|++++|+++.++. .+..+++|++|++++|.+++..+..+... ...|+.|++
T Consensus 228 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~lp~------~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~l~~L~l 301 (332)
T 2ft3_A 228 QIRMIENGSLSFLPTLRELHLDNNKLSRVPA------GLPDLKLLQVVYLHTNNITKVGVNDFCPVGFGVKRAYYNGISL 301 (332)
T ss_dssp CCCCCCTTGGGGCTTCCEEECCSSCCCBCCT------TGGGCTTCCEEECCSSCCCBCCTTSSSCSSCCSSSCCBSEEEC
T ss_pred cCCcCChhHhhCCCCCCEEECCCCcCeecCh------hhhcCccCCEEECCCCCCCccChhHccccccccccccccceEe
Confidence 6655555555555555555555555554332 23444555555555555554333322221 123444444
Q ss_pred ecCcCc--ccCchhhhccCCcceeeeccc
Q 039514 368 ANCSIS--GNIPQAISNLSNLLTLVLERN 394 (790)
Q Consensus 368 ~~n~l~--~~~p~~~~~l~~L~~L~L~~N 394 (790)
++|.+. +..|..|..+++|+.+++++|
T Consensus 302 ~~N~~~~~~~~~~~~~~l~~L~~l~l~~n 330 (332)
T 2ft3_A 302 FNNPVPYWEVQPATFRCVTDRLAIQFGNY 330 (332)
T ss_dssp CSSSSCGGGSCGGGGTTBCCSTTEEC---
T ss_pred ecCcccccccCcccccccchhhhhhcccc
Confidence 444443 333444444444444444443
No 45
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.97 E-value=3.2e-30 Score=273.10 Aligned_cols=286 Identities=19% Similarity=0.253 Sum_probs=190.6
Q ss_pred EEECCCCCcceeccccCCCCCCCCEEECCCCCCcccCChhhhCCCCCCEEeCCCCCCcccCCccccCCCCCcEEEccCcc
Q 039514 57 ALDTSQFNLQGTIPSQLGNLSSLTILNLSHNKLSGSVPSSIYTMHTLKFLDFTDNQLSGSVSSFVFNMSSIVDIRLTNNR 136 (790)
Q Consensus 57 ~Ldl~~~~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~ 136 (790)
.++++++.++ .+|..+. +.|++|+|++|++++..+..|..+++|++|+|++|++++..|..|.++++|++|++++|.
T Consensus 35 ~l~~~~~~l~-~lp~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~ 111 (330)
T 1xku_A 35 VVQCSDLGLE-KVPKDLP--PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQ 111 (330)
T ss_dssp EEECTTSCCC-SCCCSCC--TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSC
T ss_pred EEEecCCCcc-ccCccCC--CCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECCCCc
Confidence 4566666766 4566665 589999999999998888899999999999999999998889999999999999999999
Q ss_pred CcccCchhhhccCCCCCEEECCCCcCcccCCcCCCCCCCCCeeecccCcccc--cCcccccccCCCCceecccccccceE
Q 039514 137 LSGELPKNICNYLPHLKALFLDKNMFHGKIPSALSKCKQLQQLNLQLNNLSG--AIPKEIGNLTMLKGISLLYNKLQEAL 214 (790)
Q Consensus 137 l~~~lp~~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~--~~~~~~~~l~~L~~L~l~~n~l~~~l 214 (790)
++ .+|..++ ++|++|++++|.+++..+..|.++++|++|++++|.++. ..+..|.++++|++|++
T Consensus 112 l~-~l~~~~~---~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l--------- 178 (330)
T 1xku_A 112 LK-ELPEKMP---KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRI--------- 178 (330)
T ss_dssp CS-BCCSSCC---TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEEC---------
T ss_pred CC-ccChhhc---ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEEC---------
Confidence 98 7887663 688888888888887777778888888888888888753 44555555555555444
Q ss_pred EcccccCccccCccccCCCCCcEEEcccCCCcccCCcchhcCCCCcceEeecCCcccccCCccccCCCCCCEEeccCCcc
Q 039514 215 VLGMNNLVGVLPATIFNMSTLKVLILINNSLSGSLPSRIDLSLPTVEVLILALNRFFGTIPSSITNASKLTVLELGGNTF 294 (790)
Q Consensus 215 ~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~l~~n~l 294 (790)
++|.++ .+|.... ++|+.|++++|.+.+..|..+..+++|+.|++++|.+
T Consensus 179 --------------------------~~n~l~-~l~~~~~---~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l 228 (330)
T 1xku_A 179 --------------------------ADTNIT-TIPQGLP---PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSI 228 (330)
T ss_dssp --------------------------CSSCCC-SCCSSCC---TTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCC
T ss_pred --------------------------CCCccc-cCCcccc---ccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcC
Confidence 444443 2332221 4455555555555555566666677777777777777
Q ss_pred cccCcccccCCCCCccccccCCcccCCCCcccccccCCCCCCCCEEEccCCCCcccCCchhhhh-----cccCcEEEeec
Q 039514 295 SGLIPDTIGNLRNLEWLNLSKNSLTSSTSKLSFLSSLANCKKLRSLKLAGNPLDGFLPSSIGNL-----SKSLETLVIAN 369 (790)
Q Consensus 295 ~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l-----~~~L~~L~l~~ 369 (790)
++..+..|..+++|++|++++|.++.++. .+..+++|++|++++|++++..+..+... ...++.|++++
T Consensus 229 ~~~~~~~~~~l~~L~~L~L~~N~l~~lp~------~l~~l~~L~~L~l~~N~i~~~~~~~f~~~~~~~~~~~l~~l~l~~ 302 (330)
T 1xku_A 229 SAVDNGSLANTPHLRELHLNNNKLVKVPG------GLADHKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFS 302 (330)
T ss_dssp CEECTTTGGGSTTCCEEECCSSCCSSCCT------TTTTCSSCCEEECCSSCCCCCCTTSSSCSSCCTTSCCCSEEECCS
T ss_pred ceeChhhccCCCCCCEEECCCCcCccCCh------hhccCCCcCEEECCCCcCCccChhhcCCcccccccccccceEeec
Confidence 76666667777777777777777665442 34556666666666666665433333211 12344445544
Q ss_pred CcCcc--cCchhhhccCCcceeeeccc
Q 039514 370 CSISG--NIPQAISNLSNLLTLVLERN 394 (790)
Q Consensus 370 n~l~~--~~p~~~~~l~~L~~L~L~~N 394 (790)
|.+.. ..|..|..+.+++.+++++|
T Consensus 303 N~~~~~~i~~~~f~~~~~l~~l~L~~N 329 (330)
T 1xku_A 303 NPVQYWEIQPSTFRCVYVRAAVQLGNY 329 (330)
T ss_dssp SSSCGGGSCGGGGTTCCCGGGEEC---
T ss_pred CcccccccCccccccccceeEEEeccc
Confidence 44431 23334444444444444443
No 46
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.97 E-value=1.4e-33 Score=314.19 Aligned_cols=359 Identities=21% Similarity=0.221 Sum_probs=171.1
Q ss_pred CCCEEECCCCCCcccCChh-hhCCCCCCEEeCCCCCCcc----cCCccccCCCCCcEEEccCccCcccCchhhhccCC--
Q 039514 78 SLTILNLSHNKLSGSVPSS-IYTMHTLKFLDFTDNQLSG----SVSSFVFNMSSIVDIRLTNNRLSGELPKNICNYLP-- 150 (790)
Q Consensus 78 ~L~~L~Ls~N~i~~~~~~~-~~~l~~L~~L~Ls~n~l~~----~~~~~~~~l~~L~~L~L~~N~l~~~lp~~~~~~l~-- 150 (790)
+|++|||++|.++...... +..+++|++|+|++|+++. .++..+..+++|++|+|++|.+.+..+..++..++
T Consensus 4 ~l~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~ 83 (461)
T 1z7x_W 4 DIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQTP 83 (461)
T ss_dssp EEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCST
T ss_pred cceehhhhhcccCchhHHHHHhhcCCccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHHHHHHHHhhC
Confidence 3444555555444322222 4444555555555555442 22344444555555555555554333333434444
Q ss_pred --CCCEEECCCCcCcc----cCCcCCCCCCCCCeeecccCcccccCcccccc-----cCCCCceecccccccceEEcccc
Q 039514 151 --HLKALFLDKNMFHG----KIPSALSKCKQLQQLNLQLNNLSGAIPKEIGN-----LTMLKGISLLYNKLQEALVLGMN 219 (790)
Q Consensus 151 --~L~~L~L~~N~i~~----~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~-----l~~L~~L~l~~n~l~~~l~l~~n 219 (790)
+|++|+|++|.++. .++..+..+++|++|++++|.++...+..+.. .++|++|++++|.+...
T Consensus 84 ~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~------ 157 (461)
T 1z7x_W 84 SCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAA------ 157 (461)
T ss_dssp TCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGG------
T ss_pred CCceeEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHH------
Confidence 46666666666553 33555666666666666666655433333222 33455544444433210
Q ss_pred cCccccCccccCCCCCcEEEcccCCCcccCCcchh----cCCCCcceEeecCCccccc----CCccccCCCCCCEEeccC
Q 039514 220 NLVGVLPATIFNMSTLKVLILINNSLSGSLPSRID----LSLPTVEVLILALNRFFGT----IPSSITNASKLTVLELGG 291 (790)
Q Consensus 220 ~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~----~~l~~L~~L~L~~n~~~~~----~p~~~~~l~~L~~L~l~~ 291 (790)
....++..+..+++|++|++++|.+....+..+. ...++|+.|++++|.+... ++..+..+++|++|++++
T Consensus 158 -~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~ 236 (461)
T 1z7x_W 158 -SCEPLASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGS 236 (461)
T ss_dssp -GHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCS
T ss_pred -HHHHHHHHHhhCCCCCEEECcCCCcchHHHHHHHHHHhcCCCCceEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccC
Confidence 0001234445556666666666665432222111 1234555555555555442 344555566666666666
Q ss_pred CcccccC-----cccccCCCCCccccccCCcccCCCCcccccccCCCCCCCCEEEccCCCCcccCCchhhhh----cccC
Q 039514 292 NTFSGLI-----PDTIGNLRNLEWLNLSKNSLTSSTSKLSFLSSLANCKKLRSLKLAGNPLDGFLPSSIGNL----SKSL 362 (790)
Q Consensus 292 n~l~~~~-----~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l----~~~L 362 (790)
|.+++.. +..+..+++|++|++++|.++..... .+...+..+++|++|++++|.+.+..+..+... .++|
T Consensus 237 n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~-~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L 315 (461)
T 1z7x_W 237 NKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCG-DLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQL 315 (461)
T ss_dssp SBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHH-HHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCC
T ss_pred CcCChHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHH-HHHHHHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccc
Confidence 6665432 22223456666666666665542100 011234445566666666666654333222221 1356
Q ss_pred cEEEeecCcCccc----CchhhhccCCcceeeeccccccCcccccccc-----ccccCeEEeeccccCc----cCCcccc
Q 039514 363 ETLVIANCSISGN----IPQAISNLSNLLTLVLERNKLTGPISITFGR-----LQKLQGLYLASNNLVG----SFPDELC 429 (790)
Q Consensus 363 ~~L~l~~n~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~-----l~~L~~L~L~~n~l~~----~~~~~~~ 429 (790)
++|++++|.+++. ++..+..+++|++|++++|.+++..+..+.. .++|++|++++|.+++ .++..+.
T Consensus 316 ~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~ 395 (461)
T 1z7x_W 316 ESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLL 395 (461)
T ss_dssp CEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHH
T ss_pred eeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCccccccHHHHHHHHcCCCCceEEEECCCCCCChhhHHHHHHHHH
Confidence 6666666666543 3444555566666666666555433322221 3455555555555543 3333333
Q ss_pred ccccccceecccCcc
Q 039514 430 HIGRLAELALLDNRH 444 (790)
Q Consensus 430 ~l~~L~~L~l~~n~~ 444 (790)
.+++|++|++++|++
T Consensus 396 ~~~~L~~L~l~~N~i 410 (461)
T 1z7x_W 396 ANHSLRELDLSNNCL 410 (461)
T ss_dssp HCCCCCEEECCSSSC
T ss_pred hCCCccEEECCCCCC
Confidence 344444444444433
No 47
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.97 E-value=4.7e-30 Score=272.00 Aligned_cols=288 Identities=23% Similarity=0.234 Sum_probs=194.0
Q ss_pred CCcEEEcccCCCcccCCcchhcCCCCcceEeecCCcccccCCccccCCCCCCEEeccCCcccccCcccccCCCCCccccc
Q 039514 234 TLKVLILINNSLSGSLPSRIDLSLPTVEVLILALNRFFGTIPSSITNASKLTVLELGGNTFSGLIPDTIGNLRNLEWLNL 313 (790)
Q Consensus 234 ~L~~L~L~~n~l~~~~p~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L 313 (790)
+++.++++++.++ .+|..+. +.++.|++++|.+.+..|..|.++++|++|++++|.+++..|..|..+++|++|++
T Consensus 34 ~l~~l~~~~~~l~-~ip~~~~---~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 109 (332)
T 2ft3_A 34 HLRVVQCSDLGLK-AVPKEIS---PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYI 109 (332)
T ss_dssp ETTEEECCSSCCS-SCCSCCC---TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEEC
T ss_pred cCCEEECCCCCcc-ccCCCCC---CCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEEC
Confidence 4677777777765 5554432 45666666666666555556666666666666666666665666666666666666
Q ss_pred cCCcccCCCCcccccccCCCCCCCCEEEccCCCCcccCCchhhhhcccCcEEEeecCcCcccCchhhhccCCcceeeecc
Q 039514 314 SKNSLTSSTSKLSFLSSLANCKKLRSLKLAGNPLDGFLPSSIGNLSKSLETLVIANCSISGNIPQAISNLSNLLTLVLER 393 (790)
Q Consensus 314 s~n~l~~~~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~ 393 (790)
++|.++.++. .+. ++|++|++++|.+.+..+..|..+++|++|++++
T Consensus 110 ~~n~l~~l~~------------------------------~~~---~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~ 156 (332)
T 2ft3_A 110 SKNHLVEIPP------------------------------NLP---SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGG 156 (332)
T ss_dssp CSSCCCSCCS------------------------------SCC---TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCS
T ss_pred CCCcCCccCc------------------------------ccc---ccCCEEECCCCccCccCHhHhCCCccCCEEECCC
Confidence 6666554432 111 3455666666666555555566666666666666
Q ss_pred ccccC--ccccccccccccCeEEeeccccCccCCccccccccccceecccCcccccCCccccCCCCCCeeeccCCccccc
Q 039514 394 NKLTG--PISITFGRLQKLQGLYLASNNLVGSFPDELCHIGRLAELALLDNRHSGSIPSCVSNLTSLRYLYLGSNRFTFV 471 (790)
Q Consensus 394 N~l~~--~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~L~~N~l~~~ 471 (790)
|.++. ..+..+..+ +|++|++++|.+++ +|..+. ++|++|++++|.+.+..+..+..+++|++|++++|++++.
T Consensus 157 n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~~-l~~~~~--~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~ 232 (332)
T 2ft3_A 157 NPLENSGFEPGAFDGL-KLNYLRISEAKLTG-IPKDLP--ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMI 232 (332)
T ss_dssp CCCBGGGSCTTSSCSC-CCSCCBCCSSBCSS-CCSSSC--SSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCC
T ss_pred CccccCCCCcccccCC-ccCEEECcCCCCCc-cCcccc--CCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcC
Confidence 66642 445555555 67777777777664 444332 5677777777777766667777778888888888888877
Q ss_pred cCcccccCCCCceEeccCCcccccccccccccccCceEeCcCCcccccCcccccC------CcccCeeeCCCCccc--cc
Q 039514 472 IPSTFWSLKDILFFDFSSNFLVGTLSFDIGNLKVLLGINLSENNLSGDMPATIGG------LKDLQFMDLAYNRLE--GP 543 (790)
Q Consensus 472 ~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~------l~~L~~L~Ls~N~l~--~~ 543 (790)
.+..+..+++|+.|++++|+++ .+|..+..+++|+.|++++|++++..+..|.. ...|+.|++++|.+. ..
T Consensus 233 ~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~l~~L~l~~N~~~~~~~ 311 (332)
T 2ft3_A 233 ENGSLSFLPTLRELHLDNNKLS-RVPAGLPDLKLLQVVYLHTNNITKVGVNDFCPVGFGVKRAYYNGISLFNNPVPYWEV 311 (332)
T ss_dssp CTTGGGGCTTCCEEECCSSCCC-BCCTTGGGCTTCCEEECCSSCCCBCCTTSSSCSSCCSSSCCBSEEECCSSSSCGGGS
T ss_pred ChhHhhCCCCCCEEECCCCcCe-ecChhhhcCccCCEEECCCCCCCccChhHccccccccccccccceEeecCccccccc
Confidence 7777778888888888888877 55666778888888888888888777776655 367889999999887 66
Q ss_pred CCccccCCCCCCEEECCCCc
Q 039514 544 IPESFGDLTSLEVLNLSKNK 563 (790)
Q Consensus 544 ~p~~~~~l~~L~~L~L~~N~ 563 (790)
.|..|..+++|+.+++++|+
T Consensus 312 ~~~~~~~l~~L~~l~l~~n~ 331 (332)
T 2ft3_A 312 QPATFRCVTDRLAIQFGNYK 331 (332)
T ss_dssp CGGGGTTBCCSTTEEC----
T ss_pred Ccccccccchhhhhhccccc
Confidence 78889999999999998885
No 48
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.97 E-value=8.9e-30 Score=269.73 Aligned_cols=289 Identities=22% Similarity=0.240 Sum_probs=179.8
Q ss_pred CCcEEEcccCCCcccCCcchhcCCCCcceEeecCCcccccCCccccCCCCCCEEeccCCcccccCcccccCCCCCccccc
Q 039514 234 TLKVLILINNSLSGSLPSRIDLSLPTVEVLILALNRFFGTIPSSITNASKLTVLELGGNTFSGLIPDTIGNLRNLEWLNL 313 (790)
Q Consensus 234 ~L~~L~L~~n~l~~~~p~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L 313 (790)
+++.++++++.++ .+|..+ .+.++.|++++|.+.+..+..|.++++|++|++++|.+++..|..|..+++|++|++
T Consensus 32 ~l~~l~~~~~~l~-~lp~~~---~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 107 (330)
T 1xku_A 32 HLRVVQCSDLGLE-KVPKDL---PPDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYL 107 (330)
T ss_dssp ETTEEECTTSCCC-SCCCSC---CTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEEC
T ss_pred CCeEEEecCCCcc-ccCccC---CCCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEEC
Confidence 4566666666655 444332 145555666666555555555666666666666666666655666666666666666
Q ss_pred cCCcccCCCCcccccccCCCCCCCCEEEccCCCCcccCCchhhhhcccCcEEEeecCcCcccCchhhhccCCcceeeecc
Q 039514 314 SKNSLTSSTSKLSFLSSLANCKKLRSLKLAGNPLDGFLPSSIGNLSKSLETLVIANCSISGNIPQAISNLSNLLTLVLER 393 (790)
Q Consensus 314 s~n~l~~~~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~ 393 (790)
++|.++.++. .+. ++|++|++++|.+++..+..+..+++|++|++++
T Consensus 108 s~n~l~~l~~------------------------------~~~---~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 154 (330)
T 1xku_A 108 SKNQLKELPE------------------------------KMP---KTLQELRVHENEITKVRKSVFNGLNQMIVVELGT 154 (330)
T ss_dssp CSSCCSBCCS------------------------------SCC---TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCS
T ss_pred CCCcCCccCh------------------------------hhc---ccccEEECCCCcccccCHhHhcCCccccEEECCC
Confidence 6665554432 111 2455555555555554455555555566666655
Q ss_pred ccccC--ccccccccccccCeEEeeccccCccCCccccccccccceecccCcccccCCccccCCCCCCeeeccCCccccc
Q 039514 394 NKLTG--PISITFGRLQKLQGLYLASNNLVGSFPDELCHIGRLAELALLDNRHSGSIPSCVSNLTSLRYLYLGSNRFTFV 471 (790)
Q Consensus 394 N~l~~--~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~L~~N~l~~~ 471 (790)
|.+.. ..+..+..+++|++|++++|.+.. +|..+. ++|+.|++++|++.+..|..+..+++|++|++++|++++.
T Consensus 155 n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~-l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~ 231 (330)
T 1xku_A 155 NPLKSSGIENGAFQGMKKLSYIRIADTNITT-IPQGLP--PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAV 231 (330)
T ss_dssp SCCCGGGBCTTGGGGCTTCCEEECCSSCCCS-CCSSCC--TTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEE
T ss_pred CcCCccCcChhhccCCCCcCEEECCCCcccc-CCcccc--ccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCcee
Confidence 55542 344455556666666666666553 333322 5666666666666666666677777777777777777776
Q ss_pred cCcccccCCCCceEeccCCcccccccccccccccCceEeCcCCcccccCcccccC------CcccCeeeCCCCcccc--c
Q 039514 472 IPSTFWSLKDILFFDFSSNFLVGTLSFDIGNLKVLLGINLSENNLSGDMPATIGG------LKDLQFMDLAYNRLEG--P 543 (790)
Q Consensus 472 ~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~------l~~L~~L~Ls~N~l~~--~ 543 (790)
.+..+..+++|+.|++++|.++ .+|..+..++.|++|++++|+|+++.+..|.. ...|+.|++++|.+.. .
T Consensus 232 ~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~i~~~~~~~f~~~~~~~~~~~l~~l~l~~N~~~~~~i 310 (330)
T 1xku_A 232 DNGSLANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQYWEI 310 (330)
T ss_dssp CTTTGGGSTTCCEEECCSSCCS-SCCTTTTTCSSCCEEECCSSCCCCCCTTSSSCSSCCTTSCCCSEEECCSSSSCGGGS
T ss_pred ChhhccCCCCCCEEECCCCcCc-cCChhhccCCCcCEEECCCCcCCccChhhcCCcccccccccccceEeecCccccccc
Confidence 6667777777777777777776 45556777777888888888887776666643 3678888888888764 5
Q ss_pred CCccccCCCCCCEEECCCCc
Q 039514 544 IPESFGDLTSLEVLNLSKNK 563 (790)
Q Consensus 544 ~p~~~~~l~~L~~L~L~~N~ 563 (790)
.|..|..+..++.++|++|+
T Consensus 311 ~~~~f~~~~~l~~l~L~~N~ 330 (330)
T 1xku_A 311 QPSTFRCVYVRAAVQLGNYK 330 (330)
T ss_dssp CGGGGTTCCCGGGEEC----
T ss_pred CccccccccceeEEEecccC
Confidence 66788888888889988874
No 49
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.97 E-value=1.3e-33 Score=314.48 Aligned_cols=388 Identities=18% Similarity=0.120 Sum_probs=204.1
Q ss_pred CCCCEEECCCCcCcccCCcC-CCCCCCCCeeecccCcccccCcccccccCCCCceecccccccceEEcccccCccccCcc
Q 039514 150 PHLKALFLDKNMFHGKIPSA-LSKCKQLQQLNLQLNNLSGAIPKEIGNLTMLKGISLLYNKLQEALVLGMNNLVGVLPAT 228 (790)
Q Consensus 150 ~~L~~L~L~~N~i~~~~p~~-~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~l~l~~n~l~~~~p~~ 228 (790)
++|++|+|++|.++...... +..+++|++|++++|.++..... .++..
T Consensus 3 ~~l~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~-------------------------------~l~~~ 51 (461)
T 1z7x_W 3 LDIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCK-------------------------------DISSA 51 (461)
T ss_dssp EEEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHH-------------------------------HHHHH
T ss_pred ccceehhhhhcccCchhHHHHHhhcCCccEEEccCCCCCHHHHH-------------------------------HHHHH
Confidence 45666666666665433222 55566666666666665432100 12333
Q ss_pred ccCCCCCcEEEcccCCCcccCCcchhcCCC----CcceEeecCCcccc----cCCccccCCCCCCEEeccCCcccccCcc
Q 039514 229 IFNMSTLKVLILINNSLSGSLPSRIDLSLP----TVEVLILALNRFFG----TIPSSITNASKLTVLELGGNTFSGLIPD 300 (790)
Q Consensus 229 ~~~l~~L~~L~L~~n~l~~~~p~~~~~~l~----~L~~L~L~~n~~~~----~~p~~~~~l~~L~~L~l~~n~l~~~~~~ 300 (790)
+..+++|++|++++|.+....+..+...++ +|+.|++++|.+.. .++..+..+++|++|++++|.+++..+.
T Consensus 52 l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~ 131 (461)
T 1z7x_W 52 LRVNPALAELNLRSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQ 131 (461)
T ss_dssp HHTCTTCCEEECTTCCCHHHHHHHHHHTTCSTTCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHH
T ss_pred HHhCCCcCEEeCCCCcCChHHHHHHHHHHhhCCCceeEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCchHHHH
Confidence 444445555555555544322222222222 45555555555542 3466667777778888887777654333
Q ss_pred ccc-----CCCCCccccccCCcccCCCCcccccccCCCCCCCCEEEccCCCCcccCCchhhhh----cccCcEEEeecCc
Q 039514 301 TIG-----NLRNLEWLNLSKNSLTSSTSKLSFLSSLANCKKLRSLKLAGNPLDGFLPSSIGNL----SKSLETLVIANCS 371 (790)
Q Consensus 301 ~~~-----~l~~L~~L~Ls~n~l~~~~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l----~~~L~~L~l~~n~ 371 (790)
.+. ..++|++|++++|.++..... .+...+..+++|++|++++|.+.+..+..+... .++|++|++++|.
T Consensus 132 ~l~~~l~~~~~~L~~L~L~~n~l~~~~~~-~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~ 210 (461)
T 1z7x_W 132 LLCEGLLDPQCRLEKLQLEYCSLSAASCE-PLASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCG 210 (461)
T ss_dssp HHHHHHTSTTCCCCEEECTTSCCBGGGHH-HHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSC
T ss_pred HHHHHHhcCCCcceEEECCCCCCCHHHHH-HHHHHHhhCCCCCEEECcCCCcchHHHHHHHHHHhcCCCCceEEEccCCC
Confidence 332 245677777777766643210 111234556677777777777665433333221 1367777777777
Q ss_pred Cccc----CchhhhccCCcceeeeccccccCcc-----ccccccccccCeEEeeccccCccCCccccccccccceecccC
Q 039514 372 ISGN----IPQAISNLSNLLTLVLERNKLTGPI-----SITFGRLQKLQGLYLASNNLVGSFPDELCHIGRLAELALLDN 442 (790)
Q Consensus 372 l~~~----~p~~~~~l~~L~~L~L~~N~l~~~~-----~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n 442 (790)
++.. ++..+..+++|++|++++|.+++.. +..+..+++|++|++++|.++.....
T Consensus 211 l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~---------------- 274 (461)
T 1z7x_W 211 VTSDNCRDLCGIVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCG---------------- 274 (461)
T ss_dssp CBTTHHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHH----------------
T ss_pred CcHHHHHHHHHHHHhCCCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHH----------------
Confidence 7653 4556666777777777777665432 11122456666666666666532100
Q ss_pred cccccCCccccCCCCCCeeeccCCccccccCccccc-----CCCCceEeccCCccccc----ccccccccccCceEeCcC
Q 039514 443 RHSGSIPSCVSNLTSLRYLYLGSNRFTFVIPSTFWS-----LKDILFFDFSSNFLVGT----LSFDIGNLKVLLGINLSE 513 (790)
Q Consensus 443 ~~~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~-----l~~L~~L~ls~N~l~~~----~~~~~~~l~~L~~L~Ls~ 513 (790)
.++..+..+++|++|++++|.++...+..+.. .++|+.|++++|.+++. ++..+..++.|++|++++
T Consensus 275 ----~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~ 350 (461)
T 1z7x_W 275 ----DLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISN 350 (461)
T ss_dssp ----HHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCS
T ss_pred ----HHHHHHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccC
Confidence 02333344445555555555544332222221 13555555555555443 233344556666666666
Q ss_pred CcccccCcccccC-----CcccCeeeCCCCcccc----cCCccccCCCCCCEEECCCCcCcccCCcccc-----ccCCCC
Q 039514 514 NNLSGDMPATIGG-----LKDLQFMDLAYNRLEG----PIPESFGDLTSLEVLNLSKNKISGSIPKSME-----KLFYLR 579 (790)
Q Consensus 514 N~l~~~~~~~~~~-----l~~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~-----~l~~L~ 579 (790)
|.+++..+..+.. .++|++|+|++|.+++ .+|..+..+++|++|++++|++++.....+. ...+|+
T Consensus 351 n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~l~~N~i~~~~~~~l~~~l~~~~~~L~ 430 (461)
T 1z7x_W 351 NRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDAGILQLVESVRQPGCLLE 430 (461)
T ss_dssp SBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCCCCCEEECCSSSCCHHHHHHHHHHHTSTTCCCC
T ss_pred CccccccHHHHHHHHcCCCCceEEEECCCCCCChhhHHHHHHHHHhCCCccEEECCCCCCCHHHHHHHHHHhccCCcchh
Confidence 6665544333322 4567777777777764 4566666667777777777776643111111 123466
Q ss_pred eEeCCCCcce
Q 039514 580 ELNLSFNELE 589 (790)
Q Consensus 580 ~L~Ls~N~l~ 589 (790)
.|++.++.+.
T Consensus 431 ~L~~~~~~~~ 440 (461)
T 1z7x_W 431 QLVLYDIYWS 440 (461)
T ss_dssp EEECTTCCCC
T ss_pred heeecccccC
Confidence 6666665554
No 50
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.97 E-value=2.9e-30 Score=276.18 Aligned_cols=285 Identities=22% Similarity=0.214 Sum_probs=223.0
Q ss_pred CCCCCCCCCccccccCCCCCcEEEEECCCCCcceeccccCCCCCCCCEEECCCCCCcccCChhhhCCCCCCEEeCCCCCC
Q 039514 34 WTSNASVCTWIGITCDVNSHRVTALDTSQFNLQGTIPSQLGNLSSLTILNLSHNKLSGSVPSSIYTMHTLKFLDFTDNQL 113 (790)
Q Consensus 34 w~~~~~~c~w~gv~c~~~~~~v~~Ldl~~~~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~n~l 113 (790)
|.....+|.|.|+ |+. ++++++ .+|..+. ++|++|++++|.++++.+..|..+++|++|++++|++
T Consensus 23 ~~~~~~~C~~~~~-c~~----------~~~~l~-~iP~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l 88 (353)
T 2z80_A 23 SNQASLSCDRNGI-CKG----------SSGSLN-SIPSGLT--EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGI 88 (353)
T ss_dssp ----CCEECTTSE-EEC----------CSTTCS-SCCTTCC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCC
T ss_pred CCccCCCCCCCeE-eeC----------CCCCcc-ccccccc--ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCcc
Confidence 5555668999887 764 445555 4577665 4899999999999988888999999999999999999
Q ss_pred cccCCccccCCCCCcEEEccCccCcccCchhhhccCCCCCEEECCCCcCcccCC-cCCCCCCCCCeeecccC-cccccCc
Q 039514 114 SGSVSSFVFNMSSIVDIRLTNNRLSGELPKNICNYLPHLKALFLDKNMFHGKIP-SALSKCKQLQQLNLQLN-NLSGAIP 191 (790)
Q Consensus 114 ~~~~~~~~~~l~~L~~L~L~~N~l~~~lp~~~~~~l~~L~~L~L~~N~i~~~~p-~~~~~l~~L~~L~L~~N-~l~~~~~ 191 (790)
++..+..|.++++|++|++++|+++ .+|...+..+++|++|++++|.+++..+ ..|.++++|++|++++| .++...+
T Consensus 89 ~~~~~~~~~~l~~L~~L~Ls~n~l~-~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~ 167 (353)
T 2z80_A 89 NTIEEDSFSSLGSLEHLDLSYNYLS-NLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQR 167 (353)
T ss_dssp CEECTTTTTTCTTCCEEECCSSCCS-SCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECT
T ss_pred CccCHhhcCCCCCCCEEECCCCcCC-cCCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECCCCccccccCH
Confidence 9999999999999999999999999 7888877899999999999999996555 58999999999999999 5777778
Q ss_pred ccccccCCCCceecccccccceEEcccccCccccCccccCCCCCcEEEcccCCCcccCCcchhcCCCCcceEeecCCccc
Q 039514 192 KEIGNLTMLKGISLLYNKLQEALVLGMNNLVGVLPATIFNMSTLKVLILINNSLSGSLPSRIDLSLPTVEVLILALNRFF 271 (790)
Q Consensus 192 ~~~~~l~~L~~L~l~~n~l~~~l~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~~l~~L~~L~L~~n~~~ 271 (790)
..|+++++|++|++++| .+.+..|..+..+++|++|++++|.+. .+|......+++|+.|++++|.+.
T Consensus 168 ~~~~~l~~L~~L~l~~n-----------~l~~~~~~~l~~l~~L~~L~l~~n~l~-~~~~~~~~~~~~L~~L~L~~n~l~ 235 (353)
T 2z80_A 168 KDFAGLTFLEELEIDAS-----------DLQSYEPKSLKSIQNVSHLILHMKQHI-LLLEIFVDVTSSVECLELRDTDLD 235 (353)
T ss_dssp TTTTTCCEEEEEEEEET-----------TCCEECTTTTTTCSEEEEEEEECSCST-THHHHHHHHTTTEEEEEEESCBCT
T ss_pred HHccCCCCCCEEECCCC-----------CcCccCHHHHhccccCCeecCCCCccc-cchhhhhhhcccccEEECCCCccc
Confidence 89999999998665554 455567889999999999999999986 666666556889999999999888
Q ss_pred ccCCcccc---CCCCCCEEeccCCccccc----CcccccCCCCCccccccCCcccCCCCcccccccCCCCCCCCEEEccC
Q 039514 272 GTIPSSIT---NASKLTVLELGGNTFSGL----IPDTIGNLRNLEWLNLSKNSLTSSTSKLSFLSSLANCKKLRSLKLAG 344 (790)
Q Consensus 272 ~~~p~~~~---~l~~L~~L~l~~n~l~~~----~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~l~~l~~L~~L~Ls~ 344 (790)
+..+..+. ....++.++++++.+++. +|..+..+++|++|++++|+++.++.. .+..+++|++|++++
T Consensus 236 ~~~~~~l~~~~~~~~l~~l~L~~~~l~~~~l~~l~~~l~~l~~L~~L~Ls~N~l~~i~~~-----~~~~l~~L~~L~L~~ 310 (353)
T 2z80_A 236 TFHFSELSTGETNSLIKKFTFRNVKITDESLFQVMKLLNQISGLLELEFSRNQLKSVPDG-----IFDRLTSLQKIWLHT 310 (353)
T ss_dssp TCCCC------CCCCCCEEEEESCBCCHHHHHHHHHHHHTCTTCCEEECCSSCCCCCCTT-----TTTTCTTCCEEECCS
T ss_pred cccccccccccccchhhccccccccccCcchhhhHHHHhcccCCCEEECCCCCCCccCHH-----HHhcCCCCCEEEeeC
Confidence 76554433 355677788877777652 455667777777777777777765432 245566666666666
Q ss_pred CCCccc
Q 039514 345 NPLDGF 350 (790)
Q Consensus 345 n~l~~~ 350 (790)
|++.+.
T Consensus 311 N~~~~~ 316 (353)
T 2z80_A 311 NPWDCS 316 (353)
T ss_dssp SCBCCC
T ss_pred CCccCc
Confidence 666543
No 51
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.96 E-value=6.1e-28 Score=267.12 Aligned_cols=246 Identities=22% Similarity=0.285 Sum_probs=181.5
Q ss_pred EEECCCCCcceeccccCCCCCCCCEEECCCCCCcccCChhhhCCCCCCEEeCCCCCCcccCCccccCCCCCcEEEccCcc
Q 039514 57 ALDTSQFNLQGTIPSQLGNLSSLTILNLSHNKLSGSVPSSIYTMHTLKFLDFTDNQLSGSVSSFVFNMSSIVDIRLTNNR 136 (790)
Q Consensus 57 ~Ldl~~~~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~ 136 (790)
.++.++.+++ .+|..+. +++++|+|++|+|+++.+..|..+++|++|+|++|+|++..+..|.++++|++|+|++|+
T Consensus 58 ~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~ 134 (452)
T 3zyi_A 58 KVVCTRRGLS-EVPQGIP--SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNW 134 (452)
T ss_dssp EEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSC
T ss_pred EEEECCCCcC-ccCCCCC--CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCc
Confidence 3556666665 4676665 589999999999999999999999999999999999998888999999999999999999
Q ss_pred CcccCchhhhccCCCCCEEECCCCcCcccCCcCCCCCCCCCeeeccc-CcccccCcccccccCCCCceecccccccceEE
Q 039514 137 LSGELPKNICNYLPHLKALFLDKNMFHGKIPSALSKCKQLQQLNLQL-NNLSGAIPKEIGNLTMLKGISLLYNKLQEALV 215 (790)
Q Consensus 137 l~~~lp~~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~-N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~l~ 215 (790)
++ .+|...|..+++|++|+|++|.++...+..|.++++|++|++++ |.+....+..|.++++|++|++++|.+.+
T Consensus 135 l~-~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~--- 210 (452)
T 3zyi_A 135 LT-VIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKD--- 210 (452)
T ss_dssp CS-BCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSS---
T ss_pred CC-ccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCcccc---
Confidence 98 77877778889999999999999888888888899999999888 44554444456666666665555554432
Q ss_pred cccccCccccCccccCCCCCcEEEcccCCCcccCCcchhcCCCCcceEeecCCcccccCCccccCCCCCCEEeccCCccc
Q 039514 216 LGMNNLVGVLPATIFNMSTLKVLILINNSLSGSLPSRIDLSLPTVEVLILALNRFFGTIPSSITNASKLTVLELGGNTFS 295 (790)
Q Consensus 216 l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~ 295 (790)
+| .+..+++|+ .|++++|.+.+..|..|.++++|+.|++++|.++
T Consensus 211 ---------~~-~~~~l~~L~-------------------------~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~ 255 (452)
T 3zyi_A 211 ---------MP-NLTPLVGLE-------------------------ELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVS 255 (452)
T ss_dssp ---------CC-CCTTCTTCC-------------------------EEECTTSCCSEECGGGGTTCTTCCEEECTTSCCC
T ss_pred ---------cc-ccccccccc-------------------------EEECcCCcCcccCcccccCccCCCEEEeCCCcCc
Confidence 12 234444444 4555555555555666667777777777777777
Q ss_pred ccCcccccCCCCCccccccCCcccCCCCcccccccCCCCCCCCEEEccCCCCcc
Q 039514 296 GLIPDTIGNLRNLEWLNLSKNSLTSSTSKLSFLSSLANCKKLRSLKLAGNPLDG 349 (790)
Q Consensus 296 ~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~l~~l~~L~~L~Ls~n~l~~ 349 (790)
+..+..|..+++|+.|+|++|+++..+.. .+..+++|+.|+|++|++..
T Consensus 256 ~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-----~~~~l~~L~~L~L~~Np~~C 304 (452)
T 3zyi_A 256 LIERNAFDGLASLVELNLAHNNLSSLPHD-----LFTPLRYLVELHLHHNPWNC 304 (452)
T ss_dssp EECTTTTTTCTTCCEEECCSSCCSCCCTT-----SSTTCTTCCEEECCSSCEEC
T ss_pred eECHHHhcCCCCCCEEECCCCcCCccChH-----HhccccCCCEEEccCCCcCC
Confidence 77677777777777777777777765532 35666777777777777653
No 52
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.96 E-value=1.3e-30 Score=299.84 Aligned_cols=454 Identities=13% Similarity=0.094 Sum_probs=256.8
Q ss_pred CCCccccccCCCCCcEEEEECCCCCcceeccccCCCCCCCCEEECCCCCCc---ccCChhh------------hCCCCCC
Q 039514 40 VCTWIGITCDVNSHRVTALDTSQFNLQGTIPSQLGNLSSLTILNLSHNKLS---GSVPSSI------------YTMHTLK 104 (790)
Q Consensus 40 ~c~w~gv~c~~~~~~v~~Ldl~~~~l~~~~~~~~~~l~~L~~L~Ls~N~i~---~~~~~~~------------~~l~~L~ 104 (790)
|++|.++.+... .++ .+.. .....++..+..+++|++|+|+++... +..|..+ ..+++|+
T Consensus 41 ck~W~~~~~~~~-~~l---~~~~-~~~~~~~~~~~~~~~L~~L~L~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~L~ 115 (592)
T 3ogk_B 41 CRRWFKIDSETR-EHV---TMAL-CYTATPDRLSRRFPNLRSLKLKGKPRAAMFNLIPENWGGYVTPWVTEISNNLRQLK 115 (592)
T ss_dssp CHHHHHHHHHHC-CEE---EESC-GGGSCHHHHHHHCTTCSEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTTCC
T ss_pred hHHHHHhhhccc-cEE---EEee-ccccChHHHHHhCCCCeEEEecCCcchhhcccccccccccchHHHHHHHhhCCCCC
Confidence 458999965432 222 2222 223334455677888999999875421 2222222 2678899
Q ss_pred EEeCCCCCCcccCCccccCC--CCCcEEEccCcc-CcccCchhhhccCCCCCEEECCCCcCccc----CCcCCCCCCCCC
Q 039514 105 FLDFTDNQLSGSVSSFVFNM--SSIVDIRLTNNR-LSGELPKNICNYLPHLKALFLDKNMFHGK----IPSALSKCKQLQ 177 (790)
Q Consensus 105 ~L~Ls~n~l~~~~~~~~~~l--~~L~~L~L~~N~-l~~~lp~~~~~~l~~L~~L~L~~N~i~~~----~p~~~~~l~~L~ 177 (790)
+|+|++|.+++..+..+... .+|++|+|++|. ++..--..+...+++|++|+|++|.+++. ++..+..+++|+
T Consensus 116 ~L~L~~~~i~~~~~~~l~~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~ 195 (592)
T 3ogk_B 116 SVHFRRMIVSDLDLDRLAKARADDLETLKLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLE 195 (592)
T ss_dssp EEEEESCBCCHHHHHHHHHHHGGGCCEEEEESCEEEEHHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHHHHCCCCC
T ss_pred eEEeeccEecHHHHHHHHHhccccCcEEECcCCCCcCHHHHHHHHhhCCCCCEEECccccccCcchhHHHHHHhcCCCcc
Confidence 99999888877666666653 448888888876 22111112234678888888888887654 333455678888
Q ss_pred eeecccCcccc----cCcccccccCCCCceecccccccceEEcccccCccccCccccCCCCCcEEEcccCCCcccCCcch
Q 039514 178 QLNLQLNNLSG----AIPKEIGNLTMLKGISLLYNKLQEALVLGMNNLVGVLPATIFNMSTLKVLILINNSLSGSLPSRI 253 (790)
Q Consensus 178 ~L~L~~N~l~~----~~~~~~~~l~~L~~L~l~~n~l~~~l~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~ 253 (790)
+|++++|.+++ .++..+.++++|+.|++++|.+. + +|..+.++++|+.|+++..... .+.
T Consensus 196 ~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~-----------~-l~~~~~~~~~L~~L~l~~~~~~--~~~-- 259 (592)
T 3ogk_B 196 VLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEIL-----------E-LVGFFKAAANLEEFCGGSLNED--IGM-- 259 (592)
T ss_dssp EEECTTCCCSSCCHHHHHHHHHHCTTCCEEECSSCBGG-----------G-GHHHHHHCTTCCEEEECBCCCC--TTC--
T ss_pred EEEeeccCCCccCHHHHHHHHhhCCCCcEEeccCccHH-----------H-HHHHHhhhhHHHhhcccccccc--cch--
Confidence 88888888762 33444556677777655554432 2 4566667777777777653211 100
Q ss_pred hcCCCCcceEeecCCcccccCCccccCCCCCCEEeccCCcccccCcccccCCCCCccccccCCcccCCCCcccccccCCC
Q 039514 254 DLSLPTVEVLILALNRFFGTIPSSITNASKLTVLELGGNTFSGLIPDTIGNLRNLEWLNLSKNSLTSSTSKLSFLSSLAN 333 (790)
Q Consensus 254 ~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~l~~ 333 (790)
...+..+..+++|+.|+++++... .+|..+..+++|++|++++|.++... ....+..
T Consensus 260 ------------------~~~~~~l~~~~~L~~L~l~~~~~~-~l~~~~~~~~~L~~L~Ls~~~l~~~~----~~~~~~~ 316 (592)
T 3ogk_B 260 ------------------PEKYMNLVFPRKLCRLGLSYMGPN-EMPILFPFAAQIRKLDLLYALLETED----HCTLIQK 316 (592)
T ss_dssp ------------------TTSSSCCCCCTTCCEEEETTCCTT-TGGGGGGGGGGCCEEEETTCCCCHHH----HHHHHTT
T ss_pred ------------------HHHHHHhhccccccccCccccchh-HHHHHHhhcCCCcEEecCCCcCCHHH----HHHHHHh
Confidence 112233444555566655554322 33444555566666666665543211 0112345
Q ss_pred CCCCCEEEccCCCCcccCCchhhhhcccCcEEEeec-----------CcCccc-CchhhhccCCcceeeeccccccCccc
Q 039514 334 CKKLRSLKLAGNPLDGFLPSSIGNLSKSLETLVIAN-----------CSISGN-IPQAISNLSNLLTLVLERNKLTGPIS 401 (790)
Q Consensus 334 l~~L~~L~Ls~n~l~~~~p~~~~~l~~~L~~L~l~~-----------n~l~~~-~p~~~~~l~~L~~L~L~~N~l~~~~~ 401 (790)
+++|++|+++ +.+.+.....+....++|++|++++ +.+++. ++..+..+++|++|+++.|.+++...
T Consensus 317 ~~~L~~L~L~-~~~~~~~l~~~~~~~~~L~~L~L~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~L~l~~~~l~~~~~ 395 (592)
T 3ogk_B 317 CPNLEVLETR-NVIGDRGLEVLAQYCKQLKRLRIERGADEQGMEDEEGLVSQRGLIALAQGCQELEYMAVYVSDITNESL 395 (592)
T ss_dssp CTTCCEEEEE-GGGHHHHHHHHHHHCTTCCEEEEECCCCSSTTSSTTCCCCHHHHHHHHHHCTTCSEEEEEESCCCHHHH
T ss_pred CcCCCEEecc-CccCHHHHHHHHHhCCCCCEEEeecCccccccccccCccCHHHHHHHHhhCccCeEEEeecCCccHHHH
Confidence 5666666666 3332221112222224566666662 344432 12223446666666666666655444
Q ss_pred ccccc-ccccCeEEee----ccccCcc-----CCccccccccccceecccCc--ccccCCccc-cCCCCCCeeeccCCcc
Q 039514 402 ITFGR-LQKLQGLYLA----SNNLVGS-----FPDELCHIGRLAELALLDNR--HSGSIPSCV-SNLTSLRYLYLGSNRF 468 (790)
Q Consensus 402 ~~~~~-l~~L~~L~L~----~n~l~~~-----~~~~~~~l~~L~~L~l~~n~--~~~~~p~~~-~~l~~L~~L~L~~N~l 468 (790)
..+.. +++|+.|+++ .|.+++. ++..+..+++|+.|++++|. +++..+..+ ..+++|++|++++|++
T Consensus 396 ~~l~~~~~~L~~L~l~~~~~~n~l~~~p~~~~~~~~~~~~~~L~~L~L~~~~~~l~~~~~~~~~~~~~~L~~L~L~~n~l 475 (592)
T 3ogk_B 396 ESIGTYLKNLCDFRLVLLDREERITDLPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGE 475 (592)
T ss_dssp HHHHHHCCSCCEEEEEECSCCSCCSSCCCHHHHHHHHHHCTTCCEEEEECCGGGCCHHHHHHHHHSCTTCCEEEECSCCS
T ss_pred HHHHhhCCCCcEEEEeecCCCccccCchHHHHHHHHHHhCCCCCEEEEecCCCCccHHHHHHHHHhCccceEeeccCCCC
Confidence 44433 6666666665 4455432 22234556667777775432 333333333 3467788888888887
Q ss_pred ccc-cCcccccCCCCceEeccCCcccccc-cccccccccCceEeCcCCcccccCcccc-cCCcccCeeeCCCC
Q 039514 469 TFV-IPSTFWSLKDILFFDFSSNFLVGTL-SFDIGNLKVLLGINLSENNLSGDMPATI-GGLKDLQFMDLAYN 538 (790)
Q Consensus 469 ~~~-~~~~~~~l~~L~~L~ls~N~l~~~~-~~~~~~l~~L~~L~Ls~N~l~~~~~~~~-~~l~~L~~L~Ls~N 538 (790)
++. ++..+..+++|+.|++++|.+++.. +.....+++|++|+|++|+++......+ ..++.+....+..+
T Consensus 476 ~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~ls~n~it~~~~~~l~~~~p~l~~~~~~~~ 548 (592)
T 3ogk_B 476 SDEGLMEFSRGCPNLQKLEMRGCCFSERAIAAAVTKLPSLRYLWVQGYRASMTGQDLMQMARPYWNIELIPSR 548 (592)
T ss_dssp SHHHHHHHHTCCTTCCEEEEESCCCBHHHHHHHHHHCSSCCEEEEESCBCCTTCTTGGGGCCTTEEEEEECCC
T ss_pred CHHHHHHHHhcCcccCeeeccCCCCcHHHHHHHHHhcCccCeeECcCCcCCHHHHHHHHHhCCCcEEEEecCc
Confidence 653 3445567788888888888876543 3334567888888888888875533333 34566665555443
No 53
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.95 E-value=6e-28 Score=252.79 Aligned_cols=232 Identities=21% Similarity=0.202 Sum_probs=164.9
Q ss_pred cCcEEEeecCcCcccCchhhhccCCcceeeeccccccCcc--ccccccccccCeEEeeccccCccCCcccccccccccee
Q 039514 361 SLETLVIANCSISGNIPQAISNLSNLLTLVLERNKLTGPI--SITFGRLQKLQGLYLASNNLVGSFPDELCHIGRLAELA 438 (790)
Q Consensus 361 ~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~--~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 438 (790)
+|++|++++|.++...+..|..+++|++|++++|.++... +..+..+++|++|++++|.+. .+|..+..+++|++|+
T Consensus 29 ~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~-~l~~~~~~l~~L~~L~ 107 (306)
T 2z66_A 29 SATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLSFNGVI-TMSSNFLGLEQLEHLD 107 (306)
T ss_dssp TCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEECCSCSEE-EEEEEEETCTTCCEEE
T ss_pred CCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCcccccccccccCEEECCCCccc-cChhhcCCCCCCCEEE
Confidence 4555555555555333334455555555555555554221 333444555566666655555 2444455566666666
Q ss_pred cccCcccccCC-ccccCCCCCCeeeccCCccccccCcccccCCCCceEeccCCcccc-cccccccccccCceEeCcCCcc
Q 039514 439 LLDNRHSGSIP-SCVSNLTSLRYLYLGSNRFTFVIPSTFWSLKDILFFDFSSNFLVG-TLSFDIGNLKVLLGINLSENNL 516 (790)
Q Consensus 439 l~~n~~~~~~p-~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~-~~~~~~~~l~~L~~L~Ls~N~l 516 (790)
+++|++.+..+ ..+..+++|++|++++|.+.+..+..+..+++|+.|++++|.+.+ ..|..+..+++|++|++++|++
T Consensus 108 l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l 187 (306)
T 2z66_A 108 FQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQL 187 (306)
T ss_dssp CTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCC
T ss_pred CCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCccccccchhHHhhCcCCCEEECCCCCc
Confidence 66666654433 456677777777777777777777777777778888888887776 5677788888888888888888
Q ss_pred cccCcccccCCcccCeeeCCCCcccccCCccccCCCCCCEEECCCCcCcccCCccccccC-CCCeEeCCCCcceecCC
Q 039514 517 SGDMPATIGGLKDLQFMDLAYNRLEGPIPESFGDLTSLEVLNLSKNKISGSIPKSMEKLF-YLRELNLSFNELEGEIP 593 (790)
Q Consensus 517 ~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~-~L~~L~Ls~N~l~~~~p 593 (790)
++..|..|..+++|++|+|++|++++..+..+..+++|++|++++|++++..|..+..++ +|++|++++|++++.++
T Consensus 188 ~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~~~~c~ 265 (306)
T 2z66_A 188 EQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCE 265 (306)
T ss_dssp CEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEEECTTSCCCBCSSSSCCCCCTTCCEEECTTCCEECSGG
T ss_pred CCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCCEeECCCCCCcccCHHHHHhhhccCCEEEccCCCeecccC
Confidence 888888888889999999999999887777888889999999999999988888888884 89999999999987654
No 54
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.95 E-value=9.9e-29 Score=264.21 Aligned_cols=284 Identities=17% Similarity=0.196 Sum_probs=181.9
Q ss_pred CCCCCEEeccCCcccccCcccccCCCCCccccccCCcccCCCCcccccccCCCCCCCCEEEccCCCCcccCCchhhhhcc
Q 039514 281 ASKLTVLELGGNTFSGLIPDTIGNLRNLEWLNLSKNSLTSSTSKLSFLSSLANCKKLRSLKLAGNPLDGFLPSSIGNLSK 360 (790)
Q Consensus 281 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~ 360 (790)
++.....+++++.++.+ |..+. ++|++|++++|.++.++. ..+..+++|++|++++|.+++..|..+..+ +
T Consensus 30 C~~~~~c~~~~~~l~~i-P~~~~--~~L~~L~l~~n~i~~~~~-----~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l-~ 100 (353)
T 2z80_A 30 CDRNGICKGSSGSLNSI-PSGLT--EAVKSLDLSNNRITYISN-----SDLQRCVNLQALVLTSNGINTIEEDSFSSL-G 100 (353)
T ss_dssp ECTTSEEECCSTTCSSC-CTTCC--TTCCEEECTTSCCCEECT-----TTTTTCTTCCEEECTTSCCCEECTTTTTTC-T
T ss_pred CCCCeEeeCCCCCcccc-ccccc--ccCcEEECCCCcCcccCH-----HHhccCCCCCEEECCCCccCccCHhhcCCC-C
Confidence 44555678888888754 44333 478888888888776543 246677778888888877777666666665 5
Q ss_pred cCcEEEeecCcCcccCchhhhccCCcceeeeccccccCccc-cccccccccCeEEeeccc-cCccCCcccccccccccee
Q 039514 361 SLETLVIANCSISGNIPQAISNLSNLLTLVLERNKLTGPIS-ITFGRLQKLQGLYLASNN-LVGSFPDELCHIGRLAELA 438 (790)
Q Consensus 361 ~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~L~~n~-l~~~~~~~~~~l~~L~~L~ 438 (790)
+|++|++++|.+++..+..+..+++|++|++++|++++... ..+..+++|++|++++|. +....+..+..+++|++|+
T Consensus 101 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~ 180 (353)
T 2z80_A 101 SLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELE 180 (353)
T ss_dssp TCCEEECCSSCCSSCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEE
T ss_pred CCCEEECCCCcCCcCCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCCEEE
Confidence 67777777777776555557777777777777777776554 466677777777777773 5544455566666666666
Q ss_pred cccCcccccCCccccCCCCCCeeeccCCccccccCcccccCCCCceEeccCCcccccccccccccccCceEeCcCCcccc
Q 039514 439 LLDNRHSGSIPSCVSNLTSLRYLYLGSNRFTFVIPSTFWSLKDILFFDFSSNFLVGTLSFDIGNLKVLLGINLSENNLSG 518 (790)
Q Consensus 439 l~~n~~~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 518 (790)
+++|++.+..|..+..+++|++|++++|++....+..+..+++|+.|++++|.+++..+..+..
T Consensus 181 l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~---------------- 244 (353)
T 2z80_A 181 IDASDLQSYEPKSLKSIQNVSHLILHMKQHILLLEIFVDVTSSVECLELRDTDLDTFHFSELST---------------- 244 (353)
T ss_dssp EEETTCCEECTTTTTTCSEEEEEEEECSCSTTHHHHHHHHTTTEEEEEEESCBCTTCCCC--------------------
T ss_pred CCCCCcCccCHHHHhccccCCeecCCCCccccchhhhhhhcccccEEECCCCcccccccccccc----------------
Confidence 6666666555666666666666666666654433333333455555555555444332221110
Q ss_pred cCcccccCCcccCeeeCCCCcccc----cCCccccCCCCCCEEECCCCcCcccCCccccccCCCCeEeCCCCcceecCCC
Q 039514 519 DMPATIGGLKDLQFMDLAYNRLEG----PIPESFGDLTSLEVLNLSKNKISGSIPKSMEKLFYLRELNLSFNELEGEIPS 594 (790)
Q Consensus 519 ~~~~~~~~l~~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~ 594 (790)
......++.++++++.+++ .+|..+..+++|++|++++|+++...+..|..+++|++|++++|++.+.+|.
T Consensus 245 -----~~~~~~l~~l~L~~~~l~~~~l~~l~~~l~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~~~~~~~~ 319 (353)
T 2z80_A 245 -----GETNSLIKKFTFRNVKITDESLFQVMKLLNQISGLLELEFSRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 319 (353)
T ss_dssp -------CCCCCCEEEEESCBCCHHHHHHHHHHHHTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBCCCHHH
T ss_pred -----ccccchhhccccccccccCcchhhhHHHHhcccCCCEEECCCCCCCccCHHHHhcCCCCCEEEeeCCCccCcCCC
Confidence 1123455666666666554 3567778888888888888888843333357888888888888888877663
No 55
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.95 E-value=1.4e-27 Score=264.13 Aligned_cols=233 Identities=22% Similarity=0.230 Sum_probs=181.6
Q ss_pred ccCcEEEeecCcCcccCchhhhccCCcceeeeccccccCccccccccccccCeEEeeccccCccCCccccccccccceec
Q 039514 360 KSLETLVIANCSISGNIPQAISNLSNLLTLVLERNKLTGPISITFGRLQKLQGLYLASNNLVGSFPDELCHIGRLAELAL 439 (790)
Q Consensus 360 ~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l 439 (790)
+++++|++++|.+++..|..|..+++|+.|+|++|.+++..+..|.++++|++|+|++|.+++..+..+..+++|++|++
T Consensus 75 ~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 154 (452)
T 3zyi_A 75 SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWL 154 (452)
T ss_dssp TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSBCCTTTSSSCTTCCEEEC
T ss_pred CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCcCCccChhhhcccCCCCEEEC
Confidence 35666666666666666666666777777777777776666666667777777777777776655566666777777777
Q ss_pred ccCcccccCCccccCCCCCCeeeccC-CccccccCcccccCCCCceEeccCCcccccccccccccccCceEeCcCCcccc
Q 039514 440 LDNRHSGSIPSCVSNLTSLRYLYLGS-NRFTFVIPSTFWSLKDILFFDFSSNFLVGTLSFDIGNLKVLLGINLSENNLSG 518 (790)
Q Consensus 440 ~~n~~~~~~p~~~~~l~~L~~L~L~~-N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 518 (790)
++|++....+..|..+++|++|++++ |.+..+.+..|..+++|++|++++|.+++.. .+..+++|+.|+|++|++++
T Consensus 155 ~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~--~~~~l~~L~~L~Ls~N~l~~ 232 (452)
T 3zyi_A 155 RNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKDMP--NLTPLVGLEELEMSGNHFPE 232 (452)
T ss_dssp CSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSSCC--CCTTCTTCCEEECTTSCCSE
T ss_pred CCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCcccccc--cccccccccEEECcCCcCcc
Confidence 77777666566677777788888877 4555555556777888888888888887652 47788899999999999998
Q ss_pred cCcccccCCcccCeeeCCCCcccccCCccccCCCCCCEEECCCCcCcccCCccccccCCCCeEeCCCCcceecCCC
Q 039514 519 DMPATIGGLKDLQFMDLAYNRLEGPIPESFGDLTSLEVLNLSKNKISGSIPKSMEKLFYLRELNLSFNELEGEIPS 594 (790)
Q Consensus 519 ~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~ 594 (790)
..|..|.++++|+.|+|++|++++..|..|.++++|+.|+|++|++++..+..|..+++|+.|+|++|++.+.+..
T Consensus 233 ~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~CdC~~ 308 (452)
T 3zyi_A 233 IRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHNPWNCDCDI 308 (452)
T ss_dssp ECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTSSTTCTTCCEEECCSSCEECSTTT
T ss_pred cCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccChHHhccccCCCEEEccCCCcCCCCCc
Confidence 8899999999999999999999988899999999999999999999987788888999999999999999876553
No 56
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.95 E-value=1.7e-27 Score=262.46 Aligned_cols=232 Identities=23% Similarity=0.258 Sum_probs=177.6
Q ss_pred ccCcEEEeecCcCcccCchhhhccCCcceeeeccccccCccccccccccccCeEEeeccccCccCCccccccccccceec
Q 039514 360 KSLETLVIANCSISGNIPQAISNLSNLLTLVLERNKLTGPISITFGRLQKLQGLYLASNNLVGSFPDELCHIGRLAELAL 439 (790)
Q Consensus 360 ~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l 439 (790)
++++.|++++|++++..+..|..+++|++|+|++|.+++..+..|.++++|++|+|++|.++...+..+..+++|++|++
T Consensus 64 ~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 143 (440)
T 3zyj_A 64 TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWL 143 (440)
T ss_dssp TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSCCSSCCTTTSCSCSSCCEEEC
T ss_pred CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCCcCCeeCHhHhhccccCceeeC
Confidence 35666666666666655666666666666666666666666666666666666666666666555556666667777777
Q ss_pred ccCcccccCCccccCCCCCCeeeccC-CccccccCcccccCCCCceEeccCCcccccccccccccccCceEeCcCCcccc
Q 039514 440 LDNRHSGSIPSCVSNLTSLRYLYLGS-NRFTFVIPSTFWSLKDILFFDFSSNFLVGTLSFDIGNLKVLLGINLSENNLSG 518 (790)
Q Consensus 440 ~~n~~~~~~p~~~~~l~~L~~L~L~~-N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 518 (790)
++|++....+..|..+++|++|++++ |.+..+.+..|..+++|++|++++|.++... .+..+++|+.|+|++|++++
T Consensus 144 ~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~--~~~~l~~L~~L~Ls~N~l~~ 221 (440)
T 3zyj_A 144 RNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLREIP--NLTPLIKLDELDLSGNHLSA 221 (440)
T ss_dssp CSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCSSCC--CCTTCSSCCEEECTTSCCCE
T ss_pred CCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCcccc--ccCCCcccCEEECCCCccCc
Confidence 77766666666677777777777777 4455555556777788888888888777443 47788899999999999998
Q ss_pred cCcccccCCcccCeeeCCCCcccccCCccccCCCCCCEEECCCCcCcccCCccccccCCCCeEeCCCCcceecCC
Q 039514 519 DMPATIGGLKDLQFMDLAYNRLEGPIPESFGDLTSLEVLNLSKNKISGSIPKSMEKLFYLRELNLSFNELEGEIP 593 (790)
Q Consensus 519 ~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 593 (790)
..|..|.++++|+.|+|++|++++..+..|.++++|++|+|++|++++..+..|..+++|+.|+|++|++.+.+.
T Consensus 222 ~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~CdC~ 296 (440)
T 3zyj_A 222 IRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPWNCNCD 296 (440)
T ss_dssp ECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCTTTTSSCTTCCEEECCSSCEECSST
T ss_pred cChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCccChhHhccccCCCEEEcCCCCccCCCC
Confidence 889999999999999999999998889999999999999999999998888888999999999999999987554
No 57
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.95 E-value=2.1e-27 Score=261.78 Aligned_cols=245 Identities=22% Similarity=0.307 Sum_probs=184.9
Q ss_pred EEECCCCCcceeccccCCCCCCCCEEECCCCCCcccCChhhhCCCCCCEEeCCCCCCcccCCccccCCCCCcEEEccCcc
Q 039514 57 ALDTSQFNLQGTIPSQLGNLSSLTILNLSHNKLSGSVPSSIYTMHTLKFLDFTDNQLSGSVSSFVFNMSSIVDIRLTNNR 136 (790)
Q Consensus 57 ~Ldl~~~~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~ 136 (790)
.++.++.+++ .+|..+. ++++.|+|++|.|+++.+..|..+++|++|+|++|++++..+..|.++++|++|+|++|+
T Consensus 47 ~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~ 123 (440)
T 3zyj_A 47 KVICVRKNLR-EVPDGIS--TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNR 123 (440)
T ss_dssp EEECCSCCCS-SCCSCCC--TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSC
T ss_pred EEEeCCCCcC-cCCCCCC--CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCCc
Confidence 4667777776 5677766 689999999999999999999999999999999999998888999999999999999999
Q ss_pred CcccCchhhhccCCCCCEEECCCCcCcccCCcCCCCCCCCCeeecccC-cccccCcccccccCCCCceecccccccceEE
Q 039514 137 LSGELPKNICNYLPHLKALFLDKNMFHGKIPSALSKCKQLQQLNLQLN-NLSGAIPKEIGNLTMLKGISLLYNKLQEALV 215 (790)
Q Consensus 137 l~~~lp~~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~N-~l~~~~~~~~~~l~~L~~L~l~~n~l~~~l~ 215 (790)
++ .+|...|..+++|++|+|++|.++...+..|.++++|++|++++| .+....+..|.++++|++|++++|.+.+
T Consensus 124 l~-~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~--- 199 (440)
T 3zyj_A 124 LT-TIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLRE--- 199 (440)
T ss_dssp CS-SCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCSS---
T ss_pred CC-eeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCcc---
Confidence 98 788777788999999999999999888888999999999999884 4554445566777777766665555442
Q ss_pred cccccCccccCccccCCCCCcEEEcccCCCcccCCcchhcCCCCcceEeecCCcccccCCccccCCCCCCEEeccCCccc
Q 039514 216 LGMNNLVGVLPATIFNMSTLKVLILINNSLSGSLPSRIDLSLPTVEVLILALNRFFGTIPSSITNASKLTVLELGGNTFS 295 (790)
Q Consensus 216 l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~ 295 (790)
+| .+..+++|+.|+|++| .+.+..|..|.++++|+.|++++|.++
T Consensus 200 ---------~~-~~~~l~~L~~L~Ls~N-------------------------~l~~~~~~~~~~l~~L~~L~L~~n~l~ 244 (440)
T 3zyj_A 200 ---------IP-NLTPLIKLDELDLSGN-------------------------HLSAIRPGSFQGLMHLQKLWMIQSQIQ 244 (440)
T ss_dssp ---------CC-CCTTCSSCCEEECTTS-------------------------CCCEECTTTTTTCTTCCEEECTTCCCC
T ss_pred ---------cc-ccCCCcccCEEECCCC-------------------------ccCccChhhhccCccCCEEECCCCcee
Confidence 22 2444445555555554 444555566666777777777777777
Q ss_pred ccCcccccCCCCCccccccCCcccCCCCcccccccCCCCCCCCEEEccCCCCc
Q 039514 296 GLIPDTIGNLRNLEWLNLSKNSLTSSTSKLSFLSSLANCKKLRSLKLAGNPLD 348 (790)
Q Consensus 296 ~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~l~~l~~L~~L~Ls~n~l~ 348 (790)
+..+..|..+++|+.|+|++|+++.++.. .+..+++|+.|+|++|++.
T Consensus 245 ~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-----~~~~l~~L~~L~L~~Np~~ 292 (440)
T 3zyj_A 245 VIERNAFDNLQSLVEINLAHNNLTLLPHD-----LFTPLHHLERIHLHHNPWN 292 (440)
T ss_dssp EECTTSSTTCTTCCEEECTTSCCCCCCTT-----TTSSCTTCCEEECCSSCEE
T ss_pred EEChhhhcCCCCCCEEECCCCCCCccChh-----HhccccCCCEEEcCCCCcc
Confidence 77677777777777777777777765532 3566677777777777765
No 58
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.95 E-value=4.4e-28 Score=250.93 Aligned_cols=251 Identities=23% Similarity=0.235 Sum_probs=152.4
Q ss_pred CEEEccCCCCcccCCchhhhhcccCcEEEeecCcCcccCchhhhccCCcceeeeccccccCccccccccccccCeEEeec
Q 039514 338 RSLKLAGNPLDGFLPSSIGNLSKSLETLVIANCSISGNIPQAISNLSNLLTLVLERNKLTGPISITFGRLQKLQGLYLAS 417 (790)
Q Consensus 338 ~~L~Ls~n~l~~~~p~~~~~l~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~ 417 (790)
+.++.+++.++. +|..+ +++|++|++++|.+++..+..|..+++|++|++++|.+++..+..|..+++|++|++++
T Consensus 14 ~~~~c~~~~l~~-ip~~~---~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 89 (285)
T 1ozn_A 14 VTTSCPQQGLQA-VPVGI---PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSD 89 (285)
T ss_dssp CEEECCSSCCSS-CCTTC---CTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred eEEEcCcCCccc-CCcCC---CCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCC
Confidence 456666666653 33322 24566666666666655555566666666666666666655555566666666666666
Q ss_pred cc-cCccCCccccccccccceecccCcccccCCccccCCCCCCeeeccCCccccccCcccccCCCCceEeccCCcccccc
Q 039514 418 NN-LVGSFPDELCHIGRLAELALLDNRHSGSIPSCVSNLTSLRYLYLGSNRFTFVIPSTFWSLKDILFFDFSSNFLVGTL 496 (790)
Q Consensus 418 n~-l~~~~~~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~ 496 (790)
|. +.... |..+..+++|++|++++|++++..|..+..+++|++|++++|.+++..
T Consensus 90 n~~l~~~~------------------------~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ 145 (285)
T 1ozn_A 90 NAQLRSVD------------------------PATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALP 145 (285)
T ss_dssp CTTCCCCC------------------------TTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCC
T ss_pred CCCccccC------------------------HHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCcccccC
Confidence 64 44333 444445555555555555555555555555555666666666665555
Q ss_pred cccccccccCceEeCcCCcccccCcccccCCcccCeeeCCCCcccccCCccccCCCCCCEEECCCCcCcccCCccccccC
Q 039514 497 SFDIGNLKVLLGINLSENNLSGDMPATIGGLKDLQFMDLAYNRLEGPIPESFGDLTSLEVLNLSKNKISGSIPKSMEKLF 576 (790)
Q Consensus 497 ~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~ 576 (790)
+..+..+++|++|++++|++++..+..|.++++|++|++++|.+++..|..|..+++|+.|++++|.+++..+..+..++
T Consensus 146 ~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~ 225 (285)
T 1ozn_A 146 DDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLR 225 (285)
T ss_dssp TTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCT
T ss_pred HhHhccCCCccEEECCCCcccccCHHHhcCccccCEEECCCCcccccCHhHccCcccccEeeCCCCcCCcCCHHHcccCc
Confidence 55566666777777777777666666677777777777777777776677777777777777777777765556677777
Q ss_pred CCCeEeCCCCcceecCCCCcccCCCCcccccCCcCCCCCC
Q 039514 577 YLRELNLSFNELEGEIPSGGIFANFTAESFMGNELLCGLP 616 (790)
Q Consensus 577 ~L~~L~Ls~N~l~~~~p~~~~~~~~~~~~~~~n~~l~~~p 616 (790)
+|+.|++++|++.+..+.......+.......+...|..|
T Consensus 226 ~L~~L~l~~N~~~c~~~~~~~~~~l~~~~~~~~~~~c~~p 265 (285)
T 1ozn_A 226 ALQYLRLNDNPWVCDCRARPLWAWLQKFRGSSSEVPCSLP 265 (285)
T ss_dssp TCCEEECCSSCEECSGGGHHHHHHHHHCCSEECCCBEEES
T ss_pred ccCEEeccCCCccCCCCcHHHHHHHHhcccccCccccCCc
Confidence 7777777777777655543322222222333444445443
No 59
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.95 E-value=1.2e-27 Score=250.58 Aligned_cols=278 Identities=23% Similarity=0.261 Sum_probs=188.5
Q ss_pred CEEeccCCcccccCcccccCCCCCccccccCCcccCCCCcccccccCCCCCCCCEEEccCCCCcccCCchhhhhcccCcE
Q 039514 285 TVLELGGNTFSGLIPDTIGNLRNLEWLNLSKNSLTSSTSKLSFLSSLANCKKLRSLKLAGNPLDGFLPSSIGNLSKSLET 364 (790)
Q Consensus 285 ~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~~L~~ 364 (790)
+.++++++.++.+ |..+ .++|++|++++|.++.++.. .+..+++|++|++++|.+...
T Consensus 10 ~~l~c~~~~l~~i-p~~~--~~~l~~L~L~~n~l~~i~~~-----~~~~l~~L~~L~L~~n~l~~~-------------- 67 (306)
T 2z66_A 10 TEIRCNSKGLTSV-PTGI--PSSATRLELESNKLQSLPHG-----VFDKLTQLTKLSLSSNGLSFK-------------- 67 (306)
T ss_dssp TEEECCSSCCSSC-CSCC--CTTCCEEECCSSCCCCCCTT-----TTTTCTTCSEEECCSSCCCEE--------------
T ss_pred CEEEcCCCCcccC-CCCC--CCCCCEEECCCCccCccCHh-----HhhccccCCEEECCCCccCcc--------------
Confidence 3566666666543 3322 14555566665555544321 234444555555555544321
Q ss_pred EEeecCcCcccCchhhhccCCcceeeeccccccCccccccccccccCeEEeeccccCccCC-ccccccccccceecccCc
Q 039514 365 LVIANCSISGNIPQAISNLSNLLTLVLERNKLTGPISITFGRLQKLQGLYLASNNLVGSFP-DELCHIGRLAELALLDNR 443 (790)
Q Consensus 365 L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~-~~~~~l~~L~~L~l~~n~ 443 (790)
+..|..+..+++|++|++++|.+.. .+..+..+++|++|++++|.+.+..+ ..+..+++|++|++++|.
T Consensus 68 ---------~~~~~~~~~~~~L~~L~Ls~n~i~~-l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~ 137 (306)
T 2z66_A 68 ---------GCCSQSDFGTTSLKYLDLSFNGVIT-MSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTH 137 (306)
T ss_dssp ---------EEEEHHHHSCSCCCEEECCSCSEEE-EEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSC
T ss_pred ---------cCcccccccccccCEEECCCCcccc-ChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCc
Confidence 1124445555666666666666553 23335566666666666666665443 456666777777777777
Q ss_pred ccccCCccccCCCCCCeeeccCCcccc-ccCcccccCCCCceEeccCCcccccccccccccccCceEeCcCCcccccCcc
Q 039514 444 HSGSIPSCVSNLTSLRYLYLGSNRFTF-VIPSTFWSLKDILFFDFSSNFLVGTLSFDIGNLKVLLGINLSENNLSGDMPA 522 (790)
Q Consensus 444 ~~~~~p~~~~~l~~L~~L~L~~N~l~~-~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~ 522 (790)
+.+..+..+..+++|++|++++|.+++ ..|..+..+++|+.|++++|.+++..+..+..+++|++|++++|++++..+.
T Consensus 138 l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~ 217 (306)
T 2z66_A 138 TRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTF 217 (306)
T ss_dssp CEECSTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSG
T ss_pred CCccchhhcccCcCCCEEECCCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChh
Confidence 776677777778888888888888876 5777888888888888888888887788888889999999999999888888
Q ss_pred cccCCcccCeeeCCCCcccccCCccccCCC-CCCEEECCCCcCcccCC--ccccccCCCCeEeCCCCcceecCCC
Q 039514 523 TIGGLKDLQFMDLAYNRLEGPIPESFGDLT-SLEVLNLSKNKISGSIP--KSMEKLFYLRELNLSFNELEGEIPS 594 (790)
Q Consensus 523 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-~L~~L~L~~N~l~~~~p--~~~~~l~~L~~L~Ls~N~l~~~~p~ 594 (790)
.|..+++|++|+|++|++++..|..+..++ +|++|+|++|.+++.-+ ....-+...+.+.+..+.+.+..|.
T Consensus 218 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~~~~c~~~~~~~~l~~~~~~~~~~~~~~C~~p~ 292 (306)
T 2z66_A 218 PYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCEHQSFLQWIKDQRQLLVEVERMECATPS 292 (306)
T ss_dssp GGTTCTTCCEEECTTSCCCBCSSSSCCCCCTTCCEEECTTCCEECSGGGHHHHHHHHHTGGGBSCGGGCBEEESG
T ss_pred hccCcccCCEeECCCCCCcccCHHHHHhhhccCCEEEccCCCeecccChHHHHHHHHhhhhhhccccccccCCch
Confidence 899999999999999999999999999884 89999999999986422 1112233455566667777776664
No 60
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.95 E-value=1.7e-27 Score=269.80 Aligned_cols=292 Identities=26% Similarity=0.316 Sum_probs=190.8
Q ss_pred cccCCCCCCCCCCCccccc------cCCCCCcEEEEECCCCCcceeccccCCCCCCCCEEECCCCCCcccCChhhhCCCC
Q 039514 29 LLAHNWTSNASVCTWIGIT------CDVNSHRVTALDTSQFNLQGTIPSQLGNLSSLTILNLSHNKLSGSVPSSIYTMHT 102 (790)
Q Consensus 29 ~~~~~w~~~~~~c~w~gv~------c~~~~~~v~~Ldl~~~~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~ 102 (790)
.... |....+||.|.|.. |.+....++.|++++++++ .+|..+. ++|++|+|++|.|+.+.+ .+++
T Consensus 11 ~w~~-W~~~~~~~~~~~r~~~~~~~~~c~~~~l~~L~ls~n~L~-~lp~~l~--~~L~~L~L~~N~l~~lp~----~l~~ 82 (622)
T 3g06_A 11 VWSA-WRRAAPAEESRGRAAVVQKMRACLNNGNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLTSLPA----LPPE 82 (622)
T ss_dssp HHHH-HHHTCCGGGHHHHHHHHHHHHHHHHHCCCEEECCSSCCS-CCCSCCC--TTCSEEEECSCCCSCCCC----CCTT
T ss_pred HHHH-HHhcCCcchhccccccCcccccccCCCCcEEEecCCCcC-ccChhhC--CCCcEEEecCCCCCCCCC----cCCC
Confidence 4445 88788899997742 2222245889999999998 6787776 799999999999985443 5789
Q ss_pred CCEEeCCCCCCcccCCccccCCCCCcEEEccCccCcccCchhhhccCCCCCEEECCCCcCcccCCcCCCCCCCCCeeecc
Q 039514 103 LKFLDFTDNQLSGSVSSFVFNMSSIVDIRLTNNRLSGELPKNICNYLPHLKALFLDKNMFHGKIPSALSKCKQLQQLNLQ 182 (790)
Q Consensus 103 L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~lp~~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~L~ 182 (790)
|++|+|++|+|+.+.+ .+++|++|++++|.++ .+|. .+++|++|++++|.++. +|.. +++|++|+++
T Consensus 83 L~~L~Ls~N~l~~lp~----~l~~L~~L~Ls~N~l~-~l~~----~l~~L~~L~L~~N~l~~-lp~~---l~~L~~L~Ls 149 (622)
T 3g06_A 83 LRTLEVSGNQLTSLPV----LPPGLLELSIFSNPLT-HLPA----LPSGLCKLWIFGNQLTS-LPVL---PPGLQELSVS 149 (622)
T ss_dssp CCEEEECSCCCSCCCC----CCTTCCEEEECSCCCC-CCCC----CCTTCCEEECCSSCCSC-CCCC---CTTCCEEECC
T ss_pred CCEEEcCCCcCCcCCC----CCCCCCEEECcCCcCC-CCCC----CCCCcCEEECCCCCCCc-CCCC---CCCCCEEECc
Confidence 9999999999985443 6788999999999988 6765 46788999999998885 4433 4788888888
Q ss_pred cCcccccCcccccccCCCCceecccccccceEEcccccCccccCccccCCCCCcEEEcccCCCcccCCcchhcCCCCcce
Q 039514 183 LNNLSGAIPKEIGNLTMLKGISLLYNKLQEALVLGMNNLVGVLPATIFNMSTLKVLILINNSLSGSLPSRIDLSLPTVEV 262 (790)
Q Consensus 183 ~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~l~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~~l~~L~~ 262 (790)
+|++++. |. .+.+|+.|++++|.+.. +| ..+++|+.|++++|.++ .+|. ..
T Consensus 150 ~N~l~~l-~~---~~~~L~~L~L~~N~l~~------------l~---~~~~~L~~L~Ls~N~l~-~l~~----~~----- 200 (622)
T 3g06_A 150 DNQLASL-PA---LPSELCKLWAYNNQLTS------------LP---MLPSGLQELSVSDNQLA-SLPT----LP----- 200 (622)
T ss_dssp SSCCSCC-CC---CCTTCCEEECCSSCCSC------------CC---CCCTTCCEEECCSSCCS-CCCC----CC-----
T ss_pred CCcCCCc-CC---ccCCCCEEECCCCCCCC------------Cc---ccCCCCcEEECCCCCCC-CCCC----cc-----
Confidence 8888753 33 23456665555554432 23 23456666666666665 2332 12
Q ss_pred EeecCCcccccCCccccCCCCCCEEeccCCcccccCcccccCCCCCccccccCCcccCCCCcccccccCCCCCCCCEEEc
Q 039514 263 LILALNRFFGTIPSSITNASKLTVLELGGNTFSGLIPDTIGNLRNLEWLNLSKNSLTSSTSKLSFLSSLANCKKLRSLKL 342 (790)
Q Consensus 263 L~L~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~l~~l~~L~~L~L 342 (790)
++|+.|++++|.++.+ |. .+++|+.|++++|.|+.++ ..+++|+.|++
T Consensus 201 -------------------~~L~~L~L~~N~l~~l-~~---~~~~L~~L~Ls~N~L~~lp---------~~l~~L~~L~L 248 (622)
T 3g06_A 201 -------------------SELYKLWAYNNRLTSL-PA---LPSGLKELIVSGNRLTSLP---------VLPSELKELMV 248 (622)
T ss_dssp -------------------TTCCEEECCSSCCSSC-CC---CCTTCCEEECCSSCCSCCC---------CCCTTCCEEEC
T ss_pred -------------------chhhEEECcCCccccc-CC---CCCCCCEEEccCCccCcCC---------CCCCcCcEEEC
Confidence 3455555555555532 22 1345556666666555433 12355666666
Q ss_pred cCCCCcccCCchhhhhcccCcEEEeecCcCcccCchhhhccCCcceeeeccccccCcccccccccc
Q 039514 343 AGNPLDGFLPSSIGNLSKSLETLVIANCSISGNIPQAISNLSNLLTLVLERNKLTGPISITFGRLQ 408 (790)
Q Consensus 343 s~n~l~~~~p~~~~~l~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~ 408 (790)
++|.++. +|. ..++|+.|++++|.++ .+|..+..+++|+.|+|++|.+++..+..+..++
T Consensus 249 s~N~L~~-lp~----~~~~L~~L~Ls~N~L~-~lp~~l~~l~~L~~L~L~~N~l~~~~~~~l~~L~ 308 (622)
T 3g06_A 249 SGNRLTS-LPM----LPSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQALREIT 308 (622)
T ss_dssp CSSCCSC-CCC----CCTTCCEEECCSSCCC-SCCGGGGGSCTTCEEECCSCCCCHHHHHHHHHHH
T ss_pred CCCCCCc-CCc----ccccCcEEeCCCCCCC-cCCHHHhhccccCEEEecCCCCCCcCHHHHHhcc
Confidence 6666653 333 1246777777777776 4566677777777777777777766555554443
No 61
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.95 E-value=2.9e-27 Score=249.24 Aligned_cols=235 Identities=20% Similarity=0.238 Sum_probs=186.0
Q ss_pred CCCCCEEEccCCCCcccCCchhhhhcccCcEEEeecCcCcccCchhhhccCCcceeeeccccccCccccccccccccCeE
Q 039514 334 CKKLRSLKLAGNPLDGFLPSSIGNLSKSLETLVIANCSISGNIPQAISNLSNLLTLVLERNKLTGPISITFGRLQKLQGL 413 (790)
Q Consensus 334 l~~L~~L~Ls~n~l~~~~p~~~~~l~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 413 (790)
.++++.|++++|.+. .+|..+..+ ++|++|++++|.++ .+|..+..+++|++|++++|.++ ..|..+..+++|++|
T Consensus 80 ~~~l~~L~L~~n~l~-~lp~~l~~l-~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L 155 (328)
T 4fcg_A 80 QPGRVALELRSVPLP-QFPDQAFRL-SHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLREL 155 (328)
T ss_dssp STTCCEEEEESSCCS-SCCSCGGGG-TTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEE
T ss_pred ccceeEEEccCCCch-hcChhhhhC-CCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEE
Confidence 356777777777776 456566665 56777777777776 66777777777777777777777 445567777777777
Q ss_pred EeeccccCccCCccccccccccceecccCcccccCCccccCCCCCCeeeccCCccccccCcccccCCCCceEeccCCccc
Q 039514 414 YLASNNLVGSFPDELCHIGRLAELALLDNRHSGSIPSCVSNLTSLRYLYLGSNRFTFVIPSTFWSLKDILFFDFSSNFLV 493 (790)
Q Consensus 414 ~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~ 493 (790)
++++|++.+.+|..+... ..+..+.++++|++|++++|+++ .+|..+..+++|+.|++++|.++
T Consensus 156 ~L~~n~~~~~~p~~~~~~---------------~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~ 219 (328)
T 4fcg_A 156 SIRACPELTELPEPLAST---------------DASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLS 219 (328)
T ss_dssp EEEEETTCCCCCSCSEEE---------------C-CCCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCC
T ss_pred ECCCCCCccccChhHhhc---------------cchhhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCC
Confidence 777777766666554331 12234556888888888888888 66777888888999999999888
Q ss_pred ccccccccccccCceEeCcCCcccccCcccccCCcccCeeeCCCCcccccCCccccCCCCCCEEECCCCcCcccCCcccc
Q 039514 494 GTLSFDIGNLKVLLGINLSENNLSGDMPATIGGLKDLQFMDLAYNRLEGPIPESFGDLTSLEVLNLSKNKISGSIPKSME 573 (790)
Q Consensus 494 ~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~ 573 (790)
+. |..+..+++|++|++++|++.+.+|..|+++++|++|+|++|.+.+.+|..+.++++|++|+|++|.+.+.+|..+.
T Consensus 220 ~l-~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~iP~~l~ 298 (328)
T 4fcg_A 220 AL-GPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIA 298 (328)
T ss_dssp CC-CGGGGGCTTCCEEECTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCCCGGGG
T ss_pred cC-chhhccCCCCCEEECcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCchhhccHHHh
Confidence 64 44688899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCeEeCCCCcce
Q 039514 574 KLFYLRELNLSFNELE 589 (790)
Q Consensus 574 ~l~~L~~L~Ls~N~l~ 589 (790)
.+++|+.+++..|.+.
T Consensus 299 ~L~~L~~l~l~~~~~~ 314 (328)
T 4fcg_A 299 QLPANCIILVPPHLQA 314 (328)
T ss_dssp GSCTTCEEECCGGGSC
T ss_pred hccCceEEeCCHHHHH
Confidence 9999999999887664
No 62
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.95 E-value=2.7e-29 Score=288.80 Aligned_cols=449 Identities=14% Similarity=0.056 Sum_probs=229.6
Q ss_pred cCChhhhCCCCCCEEeCCCCCCc---ccCCccccCCCCCcEEEccCccCcccCchhhhccCCCCCEEECCCCcCcccCCc
Q 039514 92 SVPSSIYTMHTLKFLDFTDNQLS---GSVSSFVFNMSSIVDIRLTNNRLSGELPKNICNYLPHLKALFLDKNMFHGKIPS 168 (790)
Q Consensus 92 ~~~~~~~~l~~L~~L~Ls~n~l~---~~~~~~~~~l~~L~~L~L~~N~l~~~lp~~~~~~l~~L~~L~L~~N~i~~~~p~ 168 (790)
..+..+..+++|++|+|+++... +..|..+.+ +.......++..+++|++|+|++|.+++..+.
T Consensus 64 ~~~~~~~~~~~L~~L~L~~~~~~~~~~~~~~~~~~-------------~~~~~l~~l~~~~~~L~~L~L~~~~i~~~~~~ 130 (592)
T 3ogk_B 64 TPDRLSRRFPNLRSLKLKGKPRAAMFNLIPENWGG-------------YVTPWVTEISNNLRQLKSVHFRRMIVSDLDLD 130 (592)
T ss_dssp CHHHHHHHCTTCSEEEEECSCGGGGGTCSCTTSCC-------------BCHHHHHHHHHHCTTCCEEEEESCBCCHHHHH
T ss_pred ChHHHHHhCCCCeEEEecCCcchhhcccccccccc-------------cchHHHHHHHhhCCCCCeEEeeccEecHHHHH
Confidence 44566777888999998876431 222222110 00001111223455555555555555544444
Q ss_pred CCCCC--CCCCeeecccCc-ccc-cCcccccccCCCCceecccccccceEEcccccCccccCccccCCCCCcEEEcccCC
Q 039514 169 ALSKC--KQLQQLNLQLNN-LSG-AIPKEIGNLTMLKGISLLYNKLQEALVLGMNNLVGVLPATIFNMSTLKVLILINNS 244 (790)
Q Consensus 169 ~~~~l--~~L~~L~L~~N~-l~~-~~~~~~~~l~~L~~L~l~~n~l~~~l~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~ 244 (790)
.+... .+|++|+|++|. ++. .++....++++|++|++++|.+.+. . ...++.....+++|+.|++++|.
T Consensus 131 ~l~~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~------~-~~~l~~~~~~~~~L~~L~L~~n~ 203 (592)
T 3ogk_B 131 RLAKARADDLETLKLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEK------D-GKWLHELAQHNTSLEVLNFYMTE 203 (592)
T ss_dssp HHHHHHGGGCCEEEEESCEEEEHHHHHHHHHHCTTCSEEECTTCEEECC------C-SHHHHHHHHHCCCCCEEECTTCC
T ss_pred HHHHhccccCcEEECcCCCCcCHHHHHHHHhhCCCCCEEECccccccCc------c-hhHHHHHHhcCCCccEEEeeccC
Confidence 44332 236666665554 111 1112223455666655555443210 0 00022334456777777777777
Q ss_pred CcccCCcchhcCCCCcceEeecCCcccccCCccccCCCCCCEEeccCCcccccCcccccCCCCCccccccCCcccCCCCc
Q 039514 245 LSGSLPSRIDLSLPTVEVLILALNRFFGTIPSSITNASKLTVLELGGNTFSGLIPDTIGNLRNLEWLNLSKNSLTSSTSK 324 (790)
Q Consensus 245 l~~~~p~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~ 324 (790)
+++.-.. .++..+.++++|+.|++++|.+.+ ++..+..+++|+.|+++++..... .
T Consensus 204 ~~~~~~~---------------------~l~~~~~~~~~L~~L~L~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~--~ 259 (592)
T 3ogk_B 204 FAKISPK---------------------DLETIARNCRSLVSVKVGDFEILE-LVGFFKAAANLEEFCGGSLNEDIG--M 259 (592)
T ss_dssp CSSCCHH---------------------HHHHHHHHCTTCCEEECSSCBGGG-GHHHHHHCTTCCEEEECBCCCCTT--C
T ss_pred CCccCHH---------------------HHHHHHhhCCCCcEEeccCccHHH-HHHHHhhhhHHHhhcccccccccc--h
Confidence 6521111 111122233444444444444443 233444444444444443211100 0
Q ss_pred ccccccCCCCCCCCEEEccCCCCcccCCchhhhhcccCcEEEeecCcCcccCc-hhhhccCCcceeeeccccccCccccc
Q 039514 325 LSFLSSLANCKKLRSLKLAGNPLDGFLPSSIGNLSKSLETLVIANCSISGNIP-QAISNLSNLLTLVLERNKLTGPISIT 403 (790)
Q Consensus 325 ~~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~~L~~L~l~~n~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~~~~ 403 (790)
......+..+++|+.|+++++... .+|..+... ++|++|++++|.+++... ..+..+++|++|+++++...+..+..
T Consensus 260 ~~~~~~l~~~~~L~~L~l~~~~~~-~l~~~~~~~-~~L~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~~~~~l~~~ 337 (592)
T 3ogk_B 260 PEKYMNLVFPRKLCRLGLSYMGPN-EMPILFPFA-AQIRKLDLLYALLETEDHCTLIQKCPNLEVLETRNVIGDRGLEVL 337 (592)
T ss_dssp TTSSSCCCCCTTCCEEEETTCCTT-TGGGGGGGG-GGCCEEEETTCCCCHHHHHHHHTTCTTCCEEEEEGGGHHHHHHHH
T ss_pred HHHHHHhhccccccccCccccchh-HHHHHHhhc-CCCcEEecCCCcCCHHHHHHHHHhCcCCCEEeccCccCHHHHHHH
Confidence 011123445555666666554222 333333333 456666666666543322 23455666666666622211122222
Q ss_pred cccccccCeEEeec-----------cccCccC-CccccccccccceecccCcccccCCccccC-CCCCCeeecc----CC
Q 039514 404 FGRLQKLQGLYLAS-----------NNLVGSF-PDELCHIGRLAELALLDNRHSGSIPSCVSN-LTSLRYLYLG----SN 466 (790)
Q Consensus 404 ~~~l~~L~~L~L~~-----------n~l~~~~-~~~~~~l~~L~~L~l~~n~~~~~~p~~~~~-l~~L~~L~L~----~N 466 (790)
+..+++|++|++++ |.+++.. +.....+++|++|++..|.+++..+..+.. +++|+.|+++ .|
T Consensus 338 ~~~~~~L~~L~L~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n 417 (592)
T 3ogk_B 338 AQYCKQLKRLRIERGADEQGMEDEEGLVSQRGLIALAQGCQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREE 417 (592)
T ss_dssp HHHCTTCCEEEEECCCCSSTTSSTTCCCCHHHHHHHHHHCTTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCS
T ss_pred HHhCCCCCEEEeecCccccccccccCccCHHHHHHHHhhCccCeEEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCc
Confidence 34456666666662 3443221 112334566667766666665554444443 6777777775 56
Q ss_pred ccccc-----cCcccccCCCCceEeccCC--ccccccccccc-ccccCceEeCcCCcccc-cCcccccCCcccCeeeCCC
Q 039514 467 RFTFV-----IPSTFWSLKDILFFDFSSN--FLVGTLSFDIG-NLKVLLGINLSENNLSG-DMPATIGGLKDLQFMDLAY 537 (790)
Q Consensus 467 ~l~~~-----~~~~~~~l~~L~~L~ls~N--~l~~~~~~~~~-~l~~L~~L~Ls~N~l~~-~~~~~~~~l~~L~~L~Ls~ 537 (790)
.+++. ++..+..+++|+.|+++.+ .+++.....+. .+++|++|++++|++++ .++..+.++++|++|+|++
T Consensus 418 ~l~~~p~~~~~~~~~~~~~~L~~L~L~~~~~~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~ 497 (592)
T 3ogk_B 418 RITDLPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRG 497 (592)
T ss_dssp CCSSCCCHHHHHHHHHHCTTCCEEEEECCGGGCCHHHHHHHHHSCTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEES
T ss_pred cccCchHHHHHHHHHHhCCCCCEEEEecCCCCccHHHHHHHHHhCccceEeeccCCCCCHHHHHHHHhcCcccCeeeccC
Confidence 66643 3334566778888888643 35544443333 37788888888888876 3455567888899999999
Q ss_pred Cccccc-CCccccCCCCCCEEECCCCcCcccCCccc-cccCCCCeEeCCCC
Q 039514 538 NRLEGP-IPESFGDLTSLEVLNLSKNKISGSIPKSM-EKLFYLRELNLSFN 586 (790)
Q Consensus 538 N~l~~~-~p~~~~~l~~L~~L~L~~N~l~~~~p~~~-~~l~~L~~L~Ls~N 586 (790)
|.+++. ++..+..+++|++|+|++|+++..-...+ ..++.+....+..+
T Consensus 498 n~l~~~~~~~~~~~l~~L~~L~ls~n~it~~~~~~l~~~~p~l~~~~~~~~ 548 (592)
T 3ogk_B 498 CCFSERAIAAAVTKLPSLRYLWVQGYRASMTGQDLMQMARPYWNIELIPSR 548 (592)
T ss_dssp CCCBHHHHHHHHHHCSSCCEEEEESCBCCTTCTTGGGGCCTTEEEEEECCC
T ss_pred CCCcHHHHHHHHHhcCccCeeECcCCcCCHHHHHHHHHhCCCcEEEEecCc
Confidence 987654 33344567889999999998875433222 34555555555443
No 63
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.94 E-value=3.9e-27 Score=243.84 Aligned_cols=253 Identities=20% Similarity=0.173 Sum_probs=186.1
Q ss_pred ccccccCCcccCCCCcccccccCCCCCCCCEEEccCCCCcccCCchhhhhcccCcEEEeecCcCcccCchhhhccCCcce
Q 039514 309 EWLNLSKNSLTSSTSKLSFLSSLANCKKLRSLKLAGNPLDGFLPSSIGNLSKSLETLVIANCSISGNIPQAISNLSNLLT 388 (790)
Q Consensus 309 ~~L~Ls~n~l~~~~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~ 388 (790)
+.++.+++.++.+|.. -.++|++|++++|.+++..+..+..+ ++|++|++++|.+++..|..|..+++|++
T Consensus 14 ~~~~c~~~~l~~ip~~--------~~~~l~~L~l~~n~i~~~~~~~~~~~-~~L~~L~l~~n~l~~~~~~~~~~l~~L~~ 84 (285)
T 1ozn_A 14 VTTSCPQQGLQAVPVG--------IPAASQRIFLHGNRISHVPAASFRAC-RNLTILWLHSNVLARIDAAAFTGLALLEQ 84 (285)
T ss_dssp CEEECCSSCCSSCCTT--------CCTTCSEEECTTSCCCEECTTTTTTC-TTCCEEECCSSCCCEECTTTTTTCTTCCE
T ss_pred eEEEcCcCCcccCCcC--------CCCCceEEEeeCCcCCccCHHHcccC-CCCCEEECCCCccceeCHhhcCCccCCCE
Confidence 6788999999887642 24689999999999998877778776 68999999999999888999999999999
Q ss_pred eeecccc-ccCccccccccccccCeEEeeccccCccCCccccccccccceecccCcccccCCccccCCCCCCeeeccCCc
Q 039514 389 LVLERNK-LTGPISITFGRLQKLQGLYLASNNLVGSFPDELCHIGRLAELALLDNRHSGSIPSCVSNLTSLRYLYLGSNR 467 (790)
Q Consensus 389 L~L~~N~-l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~L~~N~ 467 (790)
|++++|. +....+..|..+++|++|++++|.+.+..+..+..+++|++|++++|++.+
T Consensus 85 L~l~~n~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~--------------------- 143 (285)
T 1ozn_A 85 LDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQA--------------------- 143 (285)
T ss_dssp EECCSCTTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCC---------------------
T ss_pred EeCCCCCCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCcccc---------------------
Confidence 9999997 888878889999999999999999886656555555555555555555544
Q ss_pred cccccCcccccCCCCceEeccCCcccccccccccccccCceEeCcCCcccccCcccccCCcccCeeeCCCCcccccCCcc
Q 039514 468 FTFVIPSTFWSLKDILFFDFSSNFLVGTLSFDIGNLKVLLGINLSENNLSGDMPATIGGLKDLQFMDLAYNRLEGPIPES 547 (790)
Q Consensus 468 l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~ 547 (790)
..+..+..+++|+.|++++|.+++..+..+..+++|++|++++|++++..|..|..+++|+.|++++|++++..+..
T Consensus 144 ---~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~ 220 (285)
T 1ozn_A 144 ---LPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEA 220 (285)
T ss_dssp ---CCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHH
T ss_pred ---cCHhHhccCCCccEEECCCCcccccCHHHhcCccccCEEECCCCcccccCHhHccCcccccEeeCCCCcCCcCCHHH
Confidence 44444444445555555555554444445666677777777777777777777777888888888888888766667
Q ss_pred ccCCCCCCEEECCCCcCcccCCccccccCCCCeEeCCCCcceecCCCC
Q 039514 548 FGDLTSLEVLNLSKNKISGSIPKSMEKLFYLRELNLSFNELEGEIPSG 595 (790)
Q Consensus 548 ~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~ 595 (790)
+..+++|++|++++|.+....+.. .-...++.+..+.+.+.+..|..
T Consensus 221 ~~~l~~L~~L~l~~N~~~c~~~~~-~~~~~l~~~~~~~~~~~c~~p~~ 267 (285)
T 1ozn_A 221 LAPLRALQYLRLNDNPWVCDCRAR-PLWAWLQKFRGSSSEVPCSLPQR 267 (285)
T ss_dssp HTTCTTCCEEECCSSCEECSGGGH-HHHHHHHHCCSEECCCBEEESGG
T ss_pred cccCcccCEEeccCCCccCCCCcH-HHHHHHHhcccccCccccCCchH
Confidence 788888888888888877433211 11123455567777777777753
No 64
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.94 E-value=1.5e-26 Score=237.11 Aligned_cols=218 Identities=27% Similarity=0.388 Sum_probs=173.6
Q ss_pred CCCCCCccccccCCCCCcEEEEECCCCCcceeccccCCCCCCCCEEECCCCCCcccCChhhhCCCCCCEEeCCCCCCccc
Q 039514 37 NASVCTWIGITCDVNSHRVTALDTSQFNLQGTIPSQLGNLSSLTILNLSHNKLSGSVPSSIYTMHTLKFLDFTDNQLSGS 116 (790)
Q Consensus 37 ~~~~c~w~gv~c~~~~~~v~~Ldl~~~~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~ 116 (790)
++++|.|.|+.|+.. ..++.+|+++++++. +|..+. ++|++|+|++|.+++..+.+|..+++|++|+|++|+++..
T Consensus 1 ~~~~C~~~~~~C~c~-~~~~~l~~~~~~l~~-ip~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i 76 (270)
T 2o6q_A 1 NEALCKKDGGVCSCN-NNKNSVDCSSKKLTA-IPSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTL 76 (270)
T ss_dssp CCCCBGGGTCSBEEE-TTTTEEECTTSCCSS-CCSCCC--TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCC
T ss_pred CCccCCCCCCCCEeC-CCCCEEEccCCCCCc-cCCCCC--CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCee
Confidence 357999999999864 356789999999984 677665 5899999999999988888999999999999999999988
Q ss_pred CCccccCCCCCcEEEccCccCcccCchhhhccCCCCCEEECCCCcCcccCCcCCCCCCCCCeeecccCcccccCcccccc
Q 039514 117 VSSFVFNMSSIVDIRLTNNRLSGELPKNICNYLPHLKALFLDKNMFHGKIPSALSKCKQLQQLNLQLNNLSGAIPKEIGN 196 (790)
Q Consensus 117 ~~~~~~~l~~L~~L~L~~N~l~~~lp~~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 196 (790)
.+..|.++++|++|++++|+++ .+|...|..+++|++|+|++|.+++..+..|..+++|++|+|++|.++...+..|..
T Consensus 77 ~~~~~~~l~~L~~L~l~~n~l~-~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~ 155 (270)
T 2o6q_A 77 PAGIFKELKNLETLWVTDNKLQ-ALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDK 155 (270)
T ss_dssp CTTTTSSCTTCCEEECCSSCCC-CCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTT
T ss_pred ChhhhcCCCCCCEEECCCCcCC-cCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccC
Confidence 8888889999999999999998 777777788899999999999999888888899999999999999988776667777
Q ss_pred cCCCCceecccccccceEEcccccCccccCccccCCCCCcEEEcccCCCcccCCcchhcCCCCcceEeecCCcccccCCc
Q 039514 197 LTMLKGISLLYNKLQEALVLGMNNLVGVLPATIFNMSTLKVLILINNSLSGSLPSRIDLSLPTVEVLILALNRFFGTIPS 276 (790)
Q Consensus 197 l~~L~~L~l~~n~l~~~l~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~~l~~L~~L~L~~n~~~~~~p~ 276 (790)
+++|++|++++|.+ +++.+..|.++++|++|++++|.++ .+ .+.
T Consensus 156 l~~L~~L~L~~n~l-----------~~~~~~~~~~l~~L~~L~L~~N~l~-~~------------------------~~~ 199 (270)
T 2o6q_A 156 LTSLKELRLYNNQL-----------KRVPEGAFDKLTELKTLKLDNNQLK-RV------------------------PEG 199 (270)
T ss_dssp CTTCCEEECCSSCC-----------SCCCTTTTTTCTTCCEEECCSSCCS-CC------------------------CTT
T ss_pred CcccceeEecCCcC-----------cEeChhHhccCCCcCEEECCCCcCC-cC------------------------CHH
Confidence 88887755555443 3344555666777777777777665 23 333
Q ss_pred cccCCCCCCEEeccCCccc
Q 039514 277 SITNASKLTVLELGGNTFS 295 (790)
Q Consensus 277 ~~~~l~~L~~L~l~~n~l~ 295 (790)
.+..+++|+.|++++|.+.
T Consensus 200 ~~~~l~~L~~L~l~~N~~~ 218 (270)
T 2o6q_A 200 AFDSLEKLKMLQLQENPWD 218 (270)
T ss_dssp TTTTCTTCCEEECCSSCBC
T ss_pred HhccccCCCEEEecCCCee
Confidence 4555666777777777654
No 65
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.94 E-value=4.8e-29 Score=261.46 Aligned_cols=265 Identities=18% Similarity=0.188 Sum_probs=143.9
Q ss_pred CCCCCCCCCccccccCCCCCcEEEEECCCCCcceeccccCCCCCCCCEEECCCCCCc-ccCChhhh-------CCCCCCE
Q 039514 34 WTSNASVCTWIGITCDVNSHRVTALDTSQFNLQGTIPSQLGNLSSLTILNLSHNKLS-GSVPSSIY-------TMHTLKF 105 (790)
Q Consensus 34 w~~~~~~c~w~gv~c~~~~~~v~~Ldl~~~~l~~~~~~~~~~l~~L~~L~Ls~N~i~-~~~~~~~~-------~l~~L~~ 105 (790)
|.....|+.+..+.......+++.+++++|.+ .+|..+... |++|+|++|.+. ...|..+. .+++|++
T Consensus 24 ~~~~~~c~~~~~~~~~~~~~~L~~l~l~~n~l--~~p~~~~~~--L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~ 99 (312)
T 1wwl_A 24 WSSAFNCLGAADVELYGGGRSLEYLLKRVDTE--ADLGQFTDI--IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQE 99 (312)
T ss_dssp GGGGGGSSSCSEEEEEEEEEECTTHHHHCCTT--CCCHHHHHH--HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCE
T ss_pred hHHHhhhhccccEEEEccCCCceeEeeccccc--ccHHHHHHH--HhhcccccccccCCCcCHHHHHHHHHhcCcCCccE
Confidence 54444455555443222123455556666666 455555443 666666666663 33444444 5666666
Q ss_pred EeCCCCCCcccCCccc--cCCCCCcEEEccCccCcccCchhhhccC-----CCCCEEECCCCcCcccCCcCCCCCCCCCe
Q 039514 106 LDFTDNQLSGSVSSFV--FNMSSIVDIRLTNNRLSGELPKNICNYL-----PHLKALFLDKNMFHGKIPSALSKCKQLQQ 178 (790)
Q Consensus 106 L~Ls~n~l~~~~~~~~--~~l~~L~~L~L~~N~l~~~lp~~~~~~l-----~~L~~L~L~~N~i~~~~p~~~~~l~~L~~ 178 (790)
|+|++|++++..|..+ .++++|++|+|++|++++. |..+ ..+ ++|++|+|++|.+++..|..|+++++|++
T Consensus 100 L~L~~n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~-~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 177 (312)
T 1wwl_A 100 LTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATR-DAWL-AELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALST 177 (312)
T ss_dssp EEEEEEBCBSCCCCCSSSCCSCCCSEEEEESCBCSSS-SSHH-HHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCE
T ss_pred EEccCCcccchhHHHHHHhcCCCccEEEccCCCCcch-hHHH-HHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCE
Confidence 6666666666666554 6666666666666666633 4333 333 66666666666666666666666666666
Q ss_pred eecccCccccc--Ccccc--cccCCCCceecccccccceEEcccccCccccCccccCCCCCcEEEcccCCCcc--cCCcc
Q 039514 179 LNLQLNNLSGA--IPKEI--GNLTMLKGISLLYNKLQEALVLGMNNLVGVLPATIFNMSTLKVLILINNSLSG--SLPSR 252 (790)
Q Consensus 179 L~L~~N~l~~~--~~~~~--~~l~~L~~L~l~~n~l~~~l~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~--~~p~~ 252 (790)
|++++|++.+. .+..+ +.+++|++|+ +++|.+++ .++..
T Consensus 178 L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~-----------------------------------L~~N~l~~~~~~~~~ 222 (312)
T 1wwl_A 178 LDLSDNPELGERGLISALCPLKFPTLQVLA-----------------------------------LRNAGMETPSGVCSA 222 (312)
T ss_dssp EECCSCTTCHHHHHHHHSCTTSCTTCCEEE-----------------------------------CTTSCCCCHHHHHHH
T ss_pred EECCCCCcCcchHHHHHHHhccCCCCCEEE-----------------------------------CCCCcCcchHHHHHH
Confidence 66666665443 12222 4455555544 44444431 12222
Q ss_pred hhcCCCCcceEeecCCcccccCC-ccccCCCCCCEEeccCCcccccCcccccCCCCCccccccCCcccCCCCcccccccC
Q 039514 253 IDLSLPTVEVLILALNRFFGTIP-SSITNASKLTVLELGGNTFSGLIPDTIGNLRNLEWLNLSKNSLTSSTSKLSFLSSL 331 (790)
Q Consensus 253 ~~~~l~~L~~L~L~~n~~~~~~p-~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~l 331 (790)
++..+++|+.|++++|.+.+..| ..+..+++|++|++++|.++ .+|..+. ++|++|++++|+|++.+ .+
T Consensus 223 ~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~-~ip~~~~--~~L~~L~Ls~N~l~~~p-------~~ 292 (312)
T 1wwl_A 223 LAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVPKGLP--AKLSVLDLSYNRLDRNP-------SP 292 (312)
T ss_dssp HHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS-SCCSSCC--SEEEEEECCSSCCCSCC-------CT
T ss_pred HHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccC-hhhhhcc--CCceEEECCCCCCCCCh-------hH
Confidence 22234444444444444444442 23344566666666666666 3344443 56666666666666543 14
Q ss_pred CCCCCCCEEEccCCCCcc
Q 039514 332 ANCKKLRSLKLAGNPLDG 349 (790)
Q Consensus 332 ~~l~~L~~L~Ls~n~l~~ 349 (790)
..+++|++|++++|++++
T Consensus 293 ~~l~~L~~L~L~~N~l~~ 310 (312)
T 1wwl_A 293 DELPQVGNLSLKGNPFLD 310 (312)
T ss_dssp TTSCEEEEEECTTCTTTC
T ss_pred hhCCCCCEEeccCCCCCC
Confidence 556666777777776653
No 66
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.94 E-value=3.5e-28 Score=254.85 Aligned_cols=245 Identities=19% Similarity=0.199 Sum_probs=171.1
Q ss_pred CCCCEEEccCCCCcccCCchhhhhcccCcEEEeecCcCc-ccCchhhh-------ccCCcceeeeccccccCcccccc--
Q 039514 335 KKLRSLKLAGNPLDGFLPSSIGNLSKSLETLVIANCSIS-GNIPQAIS-------NLSNLLTLVLERNKLTGPISITF-- 404 (790)
Q Consensus 335 ~~L~~L~Ls~n~l~~~~p~~~~~l~~~L~~L~l~~n~l~-~~~p~~~~-------~l~~L~~L~L~~N~l~~~~~~~~-- 404 (790)
++|+.|++++|.+ .+|..+.. .|+.|++++|.+. ..+|..+. .+++|++|++++|++++..+..+
T Consensus 43 ~~L~~l~l~~n~l--~~p~~~~~---~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~ 117 (312)
T 1wwl_A 43 RSLEYLLKRVDTE--ADLGQFTD---IIKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPPLLE 117 (312)
T ss_dssp EECTTHHHHCCTT--CCCHHHHH---HHHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCCCSSS
T ss_pred CCceeEeeccccc--ccHHHHHH---HHhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHHHHHH
Confidence 3444555555555 34444433 2566666666663 34454444 56777777777777776665554
Q ss_pred ccccccCeEEeeccccCccCCcccccc-----ccccceecccCcccccCCccccCCCCCCeeeccCCccccc--cCccc-
Q 039514 405 GRLQKLQGLYLASNNLVGSFPDELCHI-----GRLAELALLDNRHSGSIPSCVSNLTSLRYLYLGSNRFTFV--IPSTF- 476 (790)
Q Consensus 405 ~~l~~L~~L~L~~n~l~~~~~~~~~~l-----~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~L~~N~l~~~--~~~~~- 476 (790)
..+++|++|++++|.+++. |..+..+ ++|++|++++|++.+..|..+..+++|++|++++|++.+. .|..+
T Consensus 118 ~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~ 196 (312)
T 1wwl_A 118 ATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISALC 196 (312)
T ss_dssp CCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHHHSC
T ss_pred hcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHHHHH
Confidence 6677777777777777765 6666665 6777777777777776667777777888888888876654 22233
Q ss_pred -ccCCCCceEeccCCccccc---ccccccccccCceEeCcCCcccccCc-ccccCCcccCeeeCCCCcccccCCccccCC
Q 039514 477 -WSLKDILFFDFSSNFLVGT---LSFDIGNLKVLLGINLSENNLSGDMP-ATIGGLKDLQFMDLAYNRLEGPIPESFGDL 551 (790)
Q Consensus 477 -~~l~~L~~L~ls~N~l~~~---~~~~~~~l~~L~~L~Ls~N~l~~~~~-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 551 (790)
..+++|+.|++++|.+++. ....+..+++|++|++++|++++..| ..+..+++|++|+|++|+++ .+|..+.
T Consensus 197 ~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~-~ip~~~~-- 273 (312)
T 1wwl_A 197 PLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVPKGLP-- 273 (312)
T ss_dssp TTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS-SCCSSCC--
T ss_pred hccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccC-hhhhhcc--
Confidence 6777888888888887732 22334577888888888888887664 45667888999999999988 5666665
Q ss_pred CCCCEEECCCCcCcccCCccccccCCCCeEeCCCCccee
Q 039514 552 TSLEVLNLSKNKISGSIPKSMEKLFYLRELNLSFNELEG 590 (790)
Q Consensus 552 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 590 (790)
++|++|+|++|++++. |. +..+++|++|++++|++++
T Consensus 274 ~~L~~L~Ls~N~l~~~-p~-~~~l~~L~~L~L~~N~l~~ 310 (312)
T 1wwl_A 274 AKLSVLDLSYNRLDRN-PS-PDELPQVGNLSLKGNPFLD 310 (312)
T ss_dssp SEEEEEECCSSCCCSC-CC-TTTSCEEEEEECTTCTTTC
T ss_pred CCceEEECCCCCCCCC-hh-HhhCCCCCEEeccCCCCCC
Confidence 7889999999999865 65 8888899999999998864
No 67
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.94 E-value=2.8e-27 Score=248.59 Aligned_cols=240 Identities=21% Similarity=0.250 Sum_probs=171.7
Q ss_pred CcEEEEECCCCCcceeccccCCCCCCCCEEECCCCCCcccCChhhhCCCCCCEEeCCCCCCcccCCccccCCCCCcEEEc
Q 039514 53 HRVTALDTSQFNLQGTIPSQLGNLSSLTILNLSHNKLSGSVPSSIYTMHTLKFLDFTDNQLSGSVSSFVFNMSSIVDIRL 132 (790)
Q Consensus 53 ~~v~~Ldl~~~~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 132 (790)
.+....+++.+.+...++..+..+++|++|+|++|.+++..|..|..+++|++|+|++|++++..+ +..+++|++|++
T Consensus 10 ~~l~i~~ls~~~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~L 87 (317)
T 3o53_A 10 NRYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDL 87 (317)
T ss_dssp TEEEEESCCTTTHHHHHHHHHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEEC
T ss_pred CceeEeeccccchhhhHHHHhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEEC
Confidence 456777888888877666777788899999999999998888899999999999999999987665 888999999999
Q ss_pred cCccCcccCchhhhccCCCCCEEECCCCcCcccCCcCCCCCCCCCeeecccCcccccCcccccccCCCCceecccccccc
Q 039514 133 TNNRLSGELPKNICNYLPHLKALFLDKNMFHGKIPSALSKCKQLQQLNLQLNNLSGAIPKEIGNLTMLKGISLLYNKLQE 212 (790)
Q Consensus 133 ~~N~l~~~lp~~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 212 (790)
++|.++ .+| ..++|++|++++|.+++..+.. +++|++|++++|++++..+..++.+++|++|++++|.+.
T Consensus 88 s~n~l~-~l~-----~~~~L~~L~l~~n~l~~~~~~~---~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~- 157 (317)
T 3o53_A 88 NNNYVQ-ELL-----VGPSIETLHAANNNISRVSCSR---GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEID- 157 (317)
T ss_dssp CSSEEE-EEE-----ECTTCCEEECCSSCCSEEEECC---CSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCC-
T ss_pred cCCccc-ccc-----CCCCcCEEECCCCccCCcCccc---cCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCC-
Confidence 999987 444 2478999999999988766554 567888888888888777777777777777555555443
Q ss_pred eEEcccccCccccCcccc-CCCCCcEEEcccCCCcccCCcchhcCCCCcceEeecCCcccccCCccccCCCCCCEEeccC
Q 039514 213 ALVLGMNNLVGVLPATIF-NMSTLKVLILINNSLSGSLPSRIDLSLPTVEVLILALNRFFGTIPSSITNASKLTVLELGG 291 (790)
Q Consensus 213 ~l~l~~n~l~~~~p~~~~-~l~~L~~L~L~~n~l~~~~p~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~l~~ 291 (790)
+..+..+. .+++|++|++++|.+++ . + ....+++|++|++++
T Consensus 158 ----------~~~~~~~~~~l~~L~~L~L~~N~l~~-------------------------~-~-~~~~l~~L~~L~Ls~ 200 (317)
T 3o53_A 158 ----------TVNFAELAASSDTLEHLNLQYNFIYD-------------------------V-K-GQVVFAKLKTLDLSS 200 (317)
T ss_dssp ----------EEEGGGGGGGTTTCCEEECTTSCCCE-------------------------E-E-CCCCCTTCCEEECCS
T ss_pred ----------cccHHHHhhccCcCCEEECCCCcCcc-------------------------c-c-cccccccCCEEECCC
Confidence 33444443 46666666666666542 1 1 112366777777777
Q ss_pred CcccccCcccccCCCCCccccccCCcccCCCCcccccccCCCCCCCCEEEccCCCCc
Q 039514 292 NTFSGLIPDTIGNLRNLEWLNLSKNSLTSSTSKLSFLSSLANCKKLRSLKLAGNPLD 348 (790)
Q Consensus 292 n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~l~~l~~L~~L~Ls~n~l~ 348 (790)
|.+++..+ .|..+++|++|++++|.++.++. .+..+++|+.|++++|++.
T Consensus 201 N~l~~l~~-~~~~l~~L~~L~L~~N~l~~l~~------~~~~l~~L~~L~l~~N~~~ 250 (317)
T 3o53_A 201 NKLAFMGP-EFQSAAGVTWISLRNNKLVLIEK------ALRFSQNLEHFDLRGNGFH 250 (317)
T ss_dssp SCCCEECG-GGGGGTTCSEEECTTSCCCEECT------TCCCCTTCCEEECTTCCCB
T ss_pred CcCCcchh-hhcccCcccEEECcCCcccchhh------HhhcCCCCCEEEccCCCcc
Confidence 77776544 36677777777777777665432 2344455555555555544
No 68
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.93 E-value=3.8e-27 Score=247.59 Aligned_cols=238 Identities=25% Similarity=0.234 Sum_probs=110.0
Q ss_pred CCCCCCEEeccCCcccccCcccccCCCCCccccccCCcccCCCCcccccccCCCCCCCCEEEccCCCCcccCCchhhhhc
Q 039514 280 NASKLTVLELGGNTFSGLIPDTIGNLRNLEWLNLSKNSLTSSTSKLSFLSSLANCKKLRSLKLAGNPLDGFLPSSIGNLS 359 (790)
Q Consensus 280 ~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~ 359 (790)
.+++|++|++++|.+++..|..|..+++|++|++++|.+++.+ .+..+++|++|++++|.+++..+.
T Consensus 32 ~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~-------~~~~l~~L~~L~Ls~n~l~~l~~~------ 98 (317)
T 3o53_A 32 SAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETL-------DLESLSTLRTLDLNNNYVQELLVG------ 98 (317)
T ss_dssp TGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEE-------EETTCTTCCEEECCSSEEEEEEEC------
T ss_pred cCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcch-------hhhhcCCCCEEECcCCccccccCC------
Confidence 3344455555555554444444444455555555544444321 133444444444444444432110
Q ss_pred ccCcEEEeecCcCcccCchhhhccCCcceeeeccccccCccccccccccccCeEEeeccccCccCCccccccccccceec
Q 039514 360 KSLETLVIANCSISGNIPQAISNLSNLLTLVLERNKLTGPISITFGRLQKLQGLYLASNNLVGSFPDELCHIGRLAELAL 439 (790)
Q Consensus 360 ~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l 439 (790)
++|++|++++|.+++..+. .+++|++|++++|++++..+..+..+++|++|++++|.+.+..+..+.
T Consensus 99 ~~L~~L~l~~n~l~~~~~~---~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~---------- 165 (317)
T 3o53_A 99 PSIETLHAANNNISRVSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELA---------- 165 (317)
T ss_dssp TTCCEEECCSSCCSEEEEC---CCSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGG----------
T ss_pred CCcCEEECCCCccCCcCcc---ccCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccHHHHh----------
Confidence 3455555555555433322 134455555555555554444455555555555555555443333221
Q ss_pred ccCcccccCCccccCCCCCCeeeccCCccccccCcccccCCCCceEeccCCcccccccccccccccCceEeCcCCccccc
Q 039514 440 LDNRHSGSIPSCVSNLTSLRYLYLGSNRFTFVIPSTFWSLKDILFFDFSSNFLVGTLSFDIGNLKVLLGINLSENNLSGD 519 (790)
Q Consensus 440 ~~n~~~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 519 (790)
..+++|++|++++|++++..+. ..+++|+.|++++|.+++..+ .+..+++|+.|+|++|++++
T Consensus 166 -------------~~l~~L~~L~L~~N~l~~~~~~--~~l~~L~~L~Ls~N~l~~l~~-~~~~l~~L~~L~L~~N~l~~- 228 (317)
T 3o53_A 166 -------------ASSDTLEHLNLQYNFIYDVKGQ--VVFAKLKTLDLSSNKLAFMGP-EFQSAAGVTWISLRNNKLVL- 228 (317)
T ss_dssp -------------GGTTTCCEEECTTSCCCEEECC--CCCTTCCEEECCSSCCCEECG-GGGGGTTCSEEECTTSCCCE-
T ss_pred -------------hccCcCCEEECCCCcCcccccc--cccccCCEEECCCCcCCcchh-hhcccCcccEEECcCCcccc-
Confidence 1233334444444443332111 123444444444444443322 24455555555555555552
Q ss_pred CcccccCCcccCeeeCCCCccc-ccCCccccCCCCCCEEECC
Q 039514 520 MPATIGGLKDLQFMDLAYNRLE-GPIPESFGDLTSLEVLNLS 560 (790)
Q Consensus 520 ~~~~~~~l~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~L~ 560 (790)
+|..+..+++|+.|++++|.+. +.+|.++..+++|+.|+++
T Consensus 229 l~~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~~~L~~l~l~ 270 (317)
T 3o53_A 229 IEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQ 270 (317)
T ss_dssp ECTTCCCCTTCCEEECTTCCCBHHHHHHHHHTCHHHHHHHHH
T ss_pred hhhHhhcCCCCCEEEccCCCccCcCHHHHHhccccceEEECC
Confidence 3444555566666666666655 4455555555566666555
No 69
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.93 E-value=1.5e-24 Score=245.59 Aligned_cols=261 Identities=26% Similarity=0.309 Sum_probs=134.0
Q ss_pred CcceEeecCCcccccCCccccCCCCCCEEeccCCcccccCcccccCCCCCccccccCCcccCCCCcccccccCCCCCCCC
Q 039514 259 TVEVLILALNRFFGTIPSSITNASKLTVLELGGNTFSGLIPDTIGNLRNLEWLNLSKNSLTSSTSKLSFLSSLANCKKLR 338 (790)
Q Consensus 259 ~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~l~~l~~L~ 338 (790)
.++.+++++|.+. .+|..+. ++|+.|++++|.++.+ |. .+++|++|+|++|+|+.++. .+++|+
T Consensus 41 ~l~~L~ls~n~L~-~lp~~l~--~~L~~L~L~~N~l~~l-p~---~l~~L~~L~Ls~N~l~~lp~---------~l~~L~ 104 (622)
T 3g06_A 41 GNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLTSL-PA---LPPELRTLEVSGNQLTSLPV---------LPPGLL 104 (622)
T ss_dssp CCCEEECCSSCCS-CCCSCCC--TTCSEEEECSCCCSCC-CC---CCTTCCEEEECSCCCSCCCC---------CCTTCC
T ss_pred CCcEEEecCCCcC-ccChhhC--CCCcEEEecCCCCCCC-CC---cCCCCCEEEcCCCcCCcCCC---------CCCCCC
Confidence 4566677766665 4454443 5667777777766643 32 35666666666666665442 345666
Q ss_pred EEEccCCCCcccCCchhhhhcccCcEEEeecCcCcccCchhhhccCCcceeeeccccccCccccccccccccCeEEeecc
Q 039514 339 SLKLAGNPLDGFLPSSIGNLSKSLETLVIANCSISGNIPQAISNLSNLLTLVLERNKLTGPISITFGRLQKLQGLYLASN 418 (790)
Q Consensus 339 ~L~Ls~n~l~~~~p~~~~~l~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n 418 (790)
+|++++|.+++. |. ..++|+.|++++|++++ +|.. +++|++|++++|.+++... .+++|+.|++++|
T Consensus 105 ~L~Ls~N~l~~l-~~----~l~~L~~L~L~~N~l~~-lp~~---l~~L~~L~Ls~N~l~~l~~----~~~~L~~L~L~~N 171 (622)
T 3g06_A 105 ELSIFSNPLTHL-PA----LPSGLCKLWIFGNQLTS-LPVL---PPGLQELSVSDNQLASLPA----LPSELCKLWAYNN 171 (622)
T ss_dssp EEEECSCCCCCC-CC----CCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSCCCC----CCTTCCEEECCSS
T ss_pred EEECcCCcCCCC-CC----CCCCcCEEECCCCCCCc-CCCC---CCCCCEEECcCCcCCCcCC----ccCCCCEEECCCC
Confidence 666666666542 22 12456666666666653 3322 3556666666666554321 2345555566655
Q ss_pred ccCccCCccccccccccceecccCcccccCCccccCCCCCCeeeccCCccccccCcccccCCCCceEeccCCcccccccc
Q 039514 419 NLVGSFPDELCHIGRLAELALLDNRHSGSIPSCVSNLTSLRYLYLGSNRFTFVIPSTFWSLKDILFFDFSSNFLVGTLSF 498 (790)
Q Consensus 419 ~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~ 498 (790)
.+++ +| ..+++|+.|++++|.+.+ +|.. +++|+.|++++|.++ ....
T Consensus 172 ~l~~-l~---~~~~~L~~L~Ls~N~l~~-l~~~---~~~L~~L~L~~N~l~------------------------~l~~- 218 (622)
T 3g06_A 172 QLTS-LP---MLPSGLQELSVSDNQLAS-LPTL---PSELYKLWAYNNRLT------------------------SLPA- 218 (622)
T ss_dssp CCSC-CC---CCCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCS------------------------SCCC-
T ss_pred CCCC-Cc---ccCCCCcEEECCCCCCCC-CCCc---cchhhEEECcCCccc------------------------ccCC-
Confidence 5553 22 223444555555554442 2221 234444444444444 2221
Q ss_pred cccccccCceEeCcCCcccccCcccccCCcccCeeeCCCCcccccCCccccCCCCCCEEECCCCcCcccCCccccccCCC
Q 039514 499 DIGNLKVLLGINLSENNLSGDMPATIGGLKDLQFMDLAYNRLEGPIPESFGDLTSLEVLNLSKNKISGSIPKSMEKLFYL 578 (790)
Q Consensus 499 ~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L 578 (790)
.+++|+.|+|++|+|++ +| ..+++|+.|+|++|+|+. +|. .+++|+.|+|++|+|+ .+|..+..+++|
T Consensus 219 ---~~~~L~~L~Ls~N~L~~-lp---~~l~~L~~L~Ls~N~L~~-lp~---~~~~L~~L~Ls~N~L~-~lp~~l~~l~~L 286 (622)
T 3g06_A 219 ---LPSGLKELIVSGNRLTS-LP---VLPSELKELMVSGNRLTS-LPM---LPSGLLSLSVYRNQLT-RLPESLIHLSSE 286 (622)
T ss_dssp ---CCTTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCC-SCCGGGGGSCTT
T ss_pred ---CCCCCCEEEccCCccCc-CC---CCCCcCcEEECCCCCCCc-CCc---ccccCcEEeCCCCCCC-cCCHHHhhcccc
Confidence 12445555555555553 22 234455555555555553 232 3345555555555555 445555555555
Q ss_pred CeEeCCCCcceecCC
Q 039514 579 RELNLSFNELEGEIP 593 (790)
Q Consensus 579 ~~L~Ls~N~l~~~~p 593 (790)
+.|+|++|++++.+|
T Consensus 287 ~~L~L~~N~l~~~~~ 301 (622)
T 3g06_A 287 TTVNLEGNPLSERTL 301 (622)
T ss_dssp CEEECCSCCCCHHHH
T ss_pred CEEEecCCCCCCcCH
Confidence 555555555554433
No 70
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.93 E-value=4.8e-28 Score=278.62 Aligned_cols=110 Identities=15% Similarity=0.067 Sum_probs=56.3
Q ss_pred ccCCCCceEeccCCcccccccccccc-cccCceEeCcCCcccccCcccc-cCCcccCeeeCCCCcccccCCc-cccCCCC
Q 039514 477 WSLKDILFFDFSSNFLVGTLSFDIGN-LKVLLGINLSENNLSGDMPATI-GGLKDLQFMDLAYNRLEGPIPE-SFGDLTS 553 (790)
Q Consensus 477 ~~l~~L~~L~ls~N~l~~~~~~~~~~-l~~L~~L~Ls~N~l~~~~~~~~-~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~ 553 (790)
..+++|+.|++++ .+++.....+.. +++|+.|+|++|.+++..+..+ .++++|+.|+|++|.+++..+. ....+++
T Consensus 429 ~~~~~L~~L~L~~-~l~~~~~~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~ 507 (594)
T 2p1m_B 429 EHCKDLRRLSLSG-LLTDKVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFGDKALLANASKLET 507 (594)
T ss_dssp HHCTTCCEEECCS-SCCHHHHHHHHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSCCHHHHHHTGGGGGG
T ss_pred hhCCCccEEeecC-cccHHHHHHHHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCCcHHHHHHHHHhCCC
Confidence 3344455555544 333333333332 5556666666666654433333 4566667777776666433322 2334567
Q ss_pred CCEEECCCCcCcccCCccc-cccCCCCeEeCCCCc
Q 039514 554 LEVLNLSKNKISGSIPKSM-EKLFYLRELNLSFNE 587 (790)
Q Consensus 554 L~~L~L~~N~l~~~~p~~~-~~l~~L~~L~Ls~N~ 587 (790)
|++|++++|+++......+ ..++.|+...+..+.
T Consensus 508 L~~L~l~~~~~~~~~~~~l~~~lp~l~i~~~~~~~ 542 (594)
T 2p1m_B 508 MRSLWMSSCSVSFGACKLLGQKMPKLNVEVIDERG 542 (594)
T ss_dssp SSEEEEESSCCBHHHHHHHHHHCTTEEEEEECSSS
T ss_pred CCEEeeeCCCCCHHHHHHHHHhCCCCEEEEecCCC
Confidence 7777777776643322223 345555555555444
No 71
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.93 E-value=3.3e-28 Score=279.94 Aligned_cols=466 Identities=13% Similarity=0.104 Sum_probs=254.5
Q ss_pred CCCCccccccCCCCCcEEEEECCCCCcceeccccCCCCCCCCEEECCCCCCcc---cCC------------hhhhCCCCC
Q 039514 39 SVCTWIGITCDVNSHRVTALDTSQFNLQGTIPSQLGNLSSLTILNLSHNKLSG---SVP------------SSIYTMHTL 103 (790)
Q Consensus 39 ~~c~w~gv~c~~~~~~v~~Ldl~~~~l~~~~~~~~~~l~~L~~L~Ls~N~i~~---~~~------------~~~~~l~~L 103 (790)
-|++|.++... ....++++..... .....+..+++|++|+++++.... ..| ..+..+++|
T Consensus 33 vck~W~~~~~~----~~~~l~~~~~~~~-~~~~~~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~~~~L 107 (594)
T 2p1m_B 33 VCKSWYEIERW----CRRKVFIGNCYAV-SPATVIRRFPKVRSVELKGKPHFADFNLVPDGWGGYVYPWIEAMSSSYTWL 107 (594)
T ss_dssp SCHHHHHHHHH----HCCEEEESSTTSS-CHHHHHHHCTTCCEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTTC
T ss_pred HHHHHHHhhhh----hceEEeecccccc-CHHHHHhhCCCceEEeccCCCchhhcccccccccchhhHHHHHHHHhCCCC
Confidence 35589988322 2334555443211 122345677899999999875321 111 223467889
Q ss_pred CEEeCCCCCCcccCCcccc-CCCCCcEEEccCc-cCcccCchhhhccCCCCCEEECCCCcCcccCCcCC----CCCCCCC
Q 039514 104 KFLDFTDNQLSGSVSSFVF-NMSSIVDIRLTNN-RLSGELPKNICNYLPHLKALFLDKNMFHGKIPSAL----SKCKQLQ 177 (790)
Q Consensus 104 ~~L~Ls~n~l~~~~~~~~~-~l~~L~~L~L~~N-~l~~~lp~~~~~~l~~L~~L~L~~N~i~~~~p~~~----~~l~~L~ 177 (790)
++|+|++|.+++..+..+. .+++|++|+|++| .++......+...+++|++|+|++|.+++..+..+ ..+++|+
T Consensus 108 ~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~~~L~ 187 (594)
T 2p1m_B 108 EEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYTSLV 187 (594)
T ss_dssp CEEEEESCBCCHHHHHHHHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTCCCCC
T ss_pred CeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcCCcCc
Confidence 9999999888876666665 6888999998888 55432233444578888888888888776444333 3667888
Q ss_pred eeecccCc--cccc-CcccccccCCCCceecccccccceEEcccccCccccCccccCCCCCcEEEcccCCCcccCCcchh
Q 039514 178 QLNLQLNN--LSGA-IPKEIGNLTMLKGISLLYNKLQEALVLGMNNLVGVLPATIFNMSTLKVLILINNSLSGSLPSRID 254 (790)
Q Consensus 178 ~L~L~~N~--l~~~-~~~~~~~l~~L~~L~l~~n~l~~~l~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~ 254 (790)
+|++++|. ++.. ++..+..+++|++|++++|. .+.+ +|..+..+++|+.|+++.+...
T Consensus 188 ~L~l~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~----------~~~~-l~~~~~~~~~L~~L~l~~~~~~-------- 248 (594)
T 2p1m_B 188 SLNISCLASEVSFSALERLVTRCPNLKSLKLNRAV----------PLEK-LATLLQRAPQLEELGTGGYTAE-------- 248 (594)
T ss_dssp EEECTTCCSCCCHHHHHHHHHHCTTCCEEECCTTS----------CHHH-HHHHHHHCTTCSEEECSBCCCC--------
T ss_pred EEEecccCCcCCHHHHHHHHHhCCCCcEEecCCCC----------cHHH-HHHHHhcCCcceEcccccccCc--------
Confidence 88888886 2211 11122345677776555441 1112 5555666677777776544310
Q ss_pred cCCCCcceEeecCCcccccCCccccCCCCCCEE-eccCCcccccCcccccCCCCCccccccCCcccCCCCcccccccCCC
Q 039514 255 LSLPTVEVLILALNRFFGTIPSSITNASKLTVL-ELGGNTFSGLIPDTIGNLRNLEWLNLSKNSLTSSTSKLSFLSSLAN 333 (790)
Q Consensus 255 ~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L-~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~l~~ 333 (790)
+..+.+.+ ++..+.++++|+.| .+.+... +.++..+..+++|+.|++++|.++... +...+..
T Consensus 249 ----------~~~~~~~~-l~~~l~~~~~L~~Ls~~~~~~~-~~l~~~~~~~~~L~~L~L~~~~l~~~~----l~~~~~~ 312 (594)
T 2p1m_B 249 ----------VRPDVYSG-LSVALSGCKELRCLSGFWDAVP-AYLPAVYSVCSRLTTLNLSYATVQSYD----LVKLLCQ 312 (594)
T ss_dssp ----------CCHHHHHH-HHHHHHTCTTCCEEECCBTCCG-GGGGGGHHHHTTCCEEECTTCCCCHHH----HHHHHTT
T ss_pred ----------cchhhHHH-HHHHHhcCCCcccccCCcccch-hhHHHHHHhhCCCCEEEccCCCCCHHH----HHHHHhc
Confidence 11122222 22345566666666 3333222 122333345566666666666643211 1112345
Q ss_pred CCCCCEEEccCCCCcccCCchhhhhcccCcEEEeec---------CcCcccCchhhh-ccCCcceeeeccccccCccccc
Q 039514 334 CKKLRSLKLAGNPLDGFLPSSIGNLSKSLETLVIAN---------CSISGNIPQAIS-NLSNLLTLVLERNKLTGPISIT 403 (790)
Q Consensus 334 l~~L~~L~Ls~n~l~~~~p~~~~~l~~~L~~L~l~~---------n~l~~~~p~~~~-~l~~L~~L~L~~N~l~~~~~~~ 403 (790)
+++|++|++++| +.......+....++|++|++.+ +.+++.....+. .+++|+.|.+..|.+++.....
T Consensus 313 ~~~L~~L~l~~~-~~~~~l~~l~~~~~~L~~L~L~~~~~~g~~~~~~l~~~~l~~l~~~~~~L~~L~~~~~~l~~~~~~~ 391 (594)
T 2p1m_B 313 CPKLQRLWVLDY-IEDAGLEVLASTCKDLRELRVFPSEPFVMEPNVALTEQGLVSVSMGCPKLESVLYFCRQMTNAALIT 391 (594)
T ss_dssp CTTCCEEEEEGG-GHHHHHHHHHHHCTTCCEEEEECSCTTCSSCSSCCCHHHHHHHHHHCTTCCEEEEEESCCCHHHHHH
T ss_pred CCCcCEEeCcCc-cCHHHHHHHHHhCCCCCEEEEecCcccccccCCCCCHHHHHHHHHhchhHHHHHHhcCCcCHHHHHH
Confidence 566666666665 32211112222124566666633 233322222222 3566666666555555433333
Q ss_pred cc-cccccCeEEeec------cccCccCCccccccccccceecccCcccccCCccccCCCCCCeeeccCCccccccCccc
Q 039514 404 FG-RLQKLQGLYLAS------NNLVGSFPDELCHIGRLAELALLDNRHSGSIPSCVSNLTSLRYLYLGSNRFTFVIPSTF 476 (790)
Q Consensus 404 ~~-~l~~L~~L~L~~------n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~ 476 (790)
+. .+++|+.|+++. +.++.. |. ...++..+..+++|+.|++++ .++...+..+
T Consensus 392 l~~~~~~L~~L~L~~~~~~~~~~l~~~-~~------------------~~~~~~l~~~~~~L~~L~L~~-~l~~~~~~~l 451 (594)
T 2p1m_B 392 IARNRPNMTRFRLCIIEPKAPDYLTLE-PL------------------DIGFGAIVEHCKDLRRLSLSG-LLTDKVFEYI 451 (594)
T ss_dssp HHHHCTTCCEEEEEESSTTCCCTTTCC-CT------------------HHHHHHHHHHCTTCCEEECCS-SCCHHHHHHH
T ss_pred HHhhCCCcceeEeecccCCCcccccCC-ch------------------hhHHHHHHhhCCCccEEeecC-cccHHHHHHH
Confidence 32 355666666652 222210 00 001112244566777777765 5554444444
Q ss_pred cc-CCCCceEeccCCcccccccccc-cccccCceEeCcCCcccccCcc-cccCCcccCeeeCCCCcccccCCccc-cCCC
Q 039514 477 WS-LKDILFFDFSSNFLVGTLSFDI-GNLKVLLGINLSENNLSGDMPA-TIGGLKDLQFMDLAYNRLEGPIPESF-GDLT 552 (790)
Q Consensus 477 ~~-l~~L~~L~ls~N~l~~~~~~~~-~~l~~L~~L~Ls~N~l~~~~~~-~~~~l~~L~~L~Ls~N~l~~~~p~~~-~~l~ 552 (790)
.. +++|+.|++++|.+++.....+ ..+++|+.|+|++|.+++.... ....+++|+.|++++|+++......+ ..++
T Consensus 452 ~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~l~~~lp 531 (594)
T 2p1m_B 452 GTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFGDKALLANASKLETMRSLWMSSCSVSFGACKLLGQKMP 531 (594)
T ss_dssp HHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSCCHHHHHHTGGGGGGSSEEEEESSCCBHHHHHHHHHHCT
T ss_pred HHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCCcHHHHHHHHHhCCCCCEEeeeCCCCCHHHHHHHHHhCC
Confidence 43 6677777777777765544444 5577888888888887544333 34457888888888888754333333 4567
Q ss_pred CCCEEECCCCcCc
Q 039514 553 SLEVLNLSKNKIS 565 (790)
Q Consensus 553 ~L~~L~L~~N~l~ 565 (790)
.|+...+..+.-.
T Consensus 532 ~l~i~~~~~~~~~ 544 (594)
T 2p1m_B 532 KLNVEVIDERGAP 544 (594)
T ss_dssp TEEEEEECSSSCG
T ss_pred CCEEEEecCCCcc
Confidence 7777667666443
No 72
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.93 E-value=6.1e-26 Score=252.21 Aligned_cols=216 Identities=19% Similarity=0.171 Sum_probs=180.9
Q ss_pred ccCcEEEeecCcCcccCchhhhccCCcceeeeccccccCccccccccccccCeEEeeccccCccCCccccccccccceec
Q 039514 360 KSLETLVIANCSISGNIPQAISNLSNLLTLVLERNKLTGPISITFGRLQKLQGLYLASNNLVGSFPDELCHIGRLAELAL 439 (790)
Q Consensus 360 ~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l 439 (790)
++|++|++++|.+++..|..|..+++|++|+|++|.+++..+ +..+++|++|+|++|.+++.. ..++|+.|++
T Consensus 34 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~-----~~~~L~~L~L 106 (487)
T 3oja_A 34 WNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELL-----VGPSIETLHA 106 (487)
T ss_dssp GGCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEE-----ECTTCCEEEC
T ss_pred CCccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCC-----CCCCcCEEEC
Confidence 368888888888888778888888888888888888887655 778888888888888887543 2378888888
Q ss_pred ccCcccccCCccccCCCCCCeeeccCCccccccCcccccCCCCceEeccCCccccccccccc-ccccCceEeCcCCcccc
Q 039514 440 LDNRHSGSIPSCVSNLTSLRYLYLGSNRFTFVIPSTFWSLKDILFFDFSSNFLVGTLSFDIG-NLKVLLGINLSENNLSG 518 (790)
Q Consensus 440 ~~n~~~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~-~l~~L~~L~Ls~N~l~~ 518 (790)
++|.+.+..+. .+++|++|++++|.+++..|..+..+++|+.|++++|.+++..|..+. .++.|+.|+|++|.|++
T Consensus 107 ~~N~l~~~~~~---~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~ 183 (487)
T 3oja_A 107 ANNNISRVSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYD 183 (487)
T ss_dssp CSSCCCCEEEC---CCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCE
T ss_pred cCCcCCCCCcc---ccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCcccc
Confidence 88888766544 357899999999999988888888999999999999999988887775 78999999999999987
Q ss_pred cCcccccCCcccCeeeCCCCcccccCCccccCCCCCCEEECCCCcCcccCCccccccCCCCeEeCCCCcce
Q 039514 519 DMPATIGGLKDLQFMDLAYNRLEGPIPESFGDLTSLEVLNLSKNKISGSIPKSMEKLFYLRELNLSFNELE 589 (790)
Q Consensus 519 ~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 589 (790)
..+ +..+++|+.|+|++|.+++.+|. +..+++|+.|+|++|.+++ +|..+..+++|+.|++++|++.
T Consensus 184 ~~~--~~~l~~L~~L~Ls~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~L~l~~N~l~ 250 (487)
T 3oja_A 184 VKG--QVVFAKLKTLDLSSNKLAFMGPE-FQSAAGVTWISLRNNKLVL-IEKALRFSQNLEHFDLRGNGFH 250 (487)
T ss_dssp EEC--CCCCTTCCEEECCSSCCCEECGG-GGGGTTCSEEECTTSCCCE-ECTTCCCCTTCCEEECTTCCBC
T ss_pred ccc--cccCCCCCEEECCCCCCCCCCHh-HcCCCCccEEEecCCcCcc-cchhhccCCCCCEEEcCCCCCc
Confidence 633 34589999999999999975554 8889999999999999985 6778888999999999999997
No 73
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.92 E-value=2.7e-26 Score=255.06 Aligned_cols=234 Identities=20% Similarity=0.210 Sum_probs=163.9
Q ss_pred CCCEEEccCCCCcccCCchhhhhcccCcEEEeecCcCcccCchhhhccCCcceeeeccccccCccccccccccccCeEEe
Q 039514 336 KLRSLKLAGNPLDGFLPSSIGNLSKSLETLVIANCSISGNIPQAISNLSNLLTLVLERNKLTGPISITFGRLQKLQGLYL 415 (790)
Q Consensus 336 ~L~~L~Ls~n~l~~~~p~~~~~l~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 415 (790)
+|+.|+|++|.+.+..|..+..+ ++|++|++++|.+++..| +..+++|++|+|++|.+++..+ .++|+.|++
T Consensus 35 ~L~~L~Ls~n~l~~~~~~~~~~l-~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~~-----~~~L~~L~L 106 (487)
T 3oja_A 35 NVKELDLSGNPLSQISAADLAPF-TKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLV-----GPSIETLHA 106 (487)
T ss_dssp GCCEEECCSSCCCCCCGGGGTTC-TTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEEE-----CTTCCEEEC
T ss_pred CccEEEeeCCcCCCCCHHHHhCC-CCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCCC-----CCCcCEEEC
Confidence 45555555555554444444444 355555555555554443 5556666666666666554332 256666666
Q ss_pred eccccCccCCccccccccccceecccCcccccCCccccCCCCCCeeeccCCccccccCcccc-cCCCCceEeccCCcccc
Q 039514 416 ASNNLVGSFPDELCHIGRLAELALLDNRHSGSIPSCVSNLTSLRYLYLGSNRFTFVIPSTFW-SLKDILFFDFSSNFLVG 494 (790)
Q Consensus 416 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~-~l~~L~~L~ls~N~l~~ 494 (790)
++|.+.+..+. .+++|+.|++++|.+.+..|..+..+++|++|+|++|.+++.+|..+. .+++|+.|++++|.+++
T Consensus 107 ~~N~l~~~~~~---~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~ 183 (487)
T 3oja_A 107 ANNNISRVSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYD 183 (487)
T ss_dssp CSSCCCCEEEC---CCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCE
T ss_pred cCCcCCCCCcc---ccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCcccc
Confidence 66666654433 245666667777776666666677777777777777777777776665 67788888888888776
Q ss_pred cccccccccccCceEeCcCCcccccCcccccCCcccCeeeCCCCcccccCCccccCCCCCCEEECCCCcCc-ccCCcccc
Q 039514 495 TLSFDIGNLKVLLGINLSENNLSGDMPATIGGLKDLQFMDLAYNRLEGPIPESFGDLTSLEVLNLSKNKIS-GSIPKSME 573 (790)
Q Consensus 495 ~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~-~~~p~~~~ 573 (790)
..+ ...++.|+.|+|++|.+++.+|. |..+++|+.|+|++|.+++ +|..+..+++|+.|++++|.+. +.+|..+.
T Consensus 184 ~~~--~~~l~~L~~L~Ls~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~L~l~~N~l~c~~~~~~~~ 259 (487)
T 3oja_A 184 VKG--QVVFAKLKTLDLSSNKLAFMGPE-FQSAAGVTWISLRNNKLVL-IEKALRFSQNLEHFDLRGNGFHCGTLRDFFS 259 (487)
T ss_dssp EEC--CCCCTTCCEEECCSSCCCEECGG-GGGGTTCSEEECTTSCCCE-ECTTCCCCTTCCEEECTTCCBCHHHHHHHHT
T ss_pred ccc--cccCCCCCEEECCCCCCCCCCHh-HcCCCCccEEEecCCcCcc-cchhhccCCCCCEEEcCCCCCcCcchHHHHH
Confidence 633 33588999999999999976554 8899999999999999996 6777899999999999999998 66778888
Q ss_pred ccCCCCeEeCC
Q 039514 574 KLFYLRELNLS 584 (790)
Q Consensus 574 ~l~~L~~L~Ls 584 (790)
.++.|+.++++
T Consensus 260 ~l~~L~~l~~~ 270 (487)
T 3oja_A 260 KNQRVQTVAKQ 270 (487)
T ss_dssp TCHHHHHHHHH
T ss_pred hCCCCcEEecc
Confidence 88888877775
No 74
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.92 E-value=6.7e-25 Score=225.81 Aligned_cols=211 Identities=19% Similarity=0.189 Sum_probs=141.8
Q ss_pred ccCcEEEeecCcCcccCchhhhccCCcceeeeccccccCccccccccccccCeEEeeccccCccCCccccccccccceec
Q 039514 360 KSLETLVIANCSISGNIPQAISNLSNLLTLVLERNKLTGPISITFGRLQKLQGLYLASNNLVGSFPDELCHIGRLAELAL 439 (790)
Q Consensus 360 ~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l 439 (790)
++|++|++++|.+++..+..|..+++|++|++++|.+++..+..|..+++|++|++++|.+.+..+
T Consensus 28 ~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~-------------- 93 (276)
T 2z62_A 28 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLAL-------------- 93 (276)
T ss_dssp TTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECT--------------
T ss_pred CCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccCh--------------
Confidence 356666666666665555556666666666666666665555555555666666666555554444
Q ss_pred ccCcccccCCccccCCCCCCeeeccCCccccccCcccccCCCCceEeccCCccccc-ccccccccccCceEeCcCCcccc
Q 039514 440 LDNRHSGSIPSCVSNLTSLRYLYLGSNRFTFVIPSTFWSLKDILFFDFSSNFLVGT-LSFDIGNLKVLLGINLSENNLSG 518 (790)
Q Consensus 440 ~~n~~~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~-~~~~~~~l~~L~~L~Ls~N~l~~ 518 (790)
..+.++++|++|++++|++.+..+..+..+++|++|++++|.+++. +|..+..+++|++|++++|++++
T Consensus 94 ----------~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~ 163 (276)
T 2z62_A 94 ----------GAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQS 163 (276)
T ss_dssp ----------TTTTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCE
T ss_pred ----------hhhcCCccccEEECCCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCc
Confidence 4445555555555555555555554555556666666666666543 35566677777777777777777
Q ss_pred cCcccccCCcccC----eeeCCCCcccccCCccccCCCCCCEEECCCCcCcccCCccccccCCCCeEeCCCCcceecCCC
Q 039514 519 DMPATIGGLKDLQ----FMDLAYNRLEGPIPESFGDLTSLEVLNLSKNKISGSIPKSMEKLFYLRELNLSFNELEGEIPS 594 (790)
Q Consensus 519 ~~~~~~~~l~~L~----~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~ 594 (790)
..+..|..+++|+ .|++++|++++..+..+.. .+|++|++++|++++..+..|..+++|++|++++|++.+.+|.
T Consensus 164 ~~~~~~~~l~~L~~l~l~L~ls~n~l~~~~~~~~~~-~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~~ 242 (276)
T 2z62_A 164 IYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKE-IRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 242 (276)
T ss_dssp ECGGGGHHHHTCTTCCEEEECCSSCCCEECTTSSCS-CCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBCCCTTT
T ss_pred CCHHHhhhhhhccccceeeecCCCcccccCccccCC-CcccEEECCCCceeecCHhHhcccccccEEEccCCcccccCCc
Confidence 7666676666666 7888888888776666554 4799999999999877777788899999999999999887775
Q ss_pred C
Q 039514 595 G 595 (790)
Q Consensus 595 ~ 595 (790)
.
T Consensus 243 l 243 (276)
T 2z62_A 243 I 243 (276)
T ss_dssp T
T ss_pred h
Confidence 4
No 75
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.91 E-value=5e-24 Score=219.26 Aligned_cols=225 Identities=26% Similarity=0.256 Sum_probs=171.5
Q ss_pred cccccCCcccCCCCcccccccCCCCCCCCEEEccCCCCcccCCchhhhhcccCcEEEeecCcCcccCchhhhccCCccee
Q 039514 310 WLNLSKNSLTSSTSKLSFLSSLANCKKLRSLKLAGNPLDGFLPSSIGNLSKSLETLVIANCSISGNIPQAISNLSNLLTL 389 (790)
Q Consensus 310 ~L~Ls~n~l~~~~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L 389 (790)
..+..+..+..+|..+ .++|++|++++|.+++..+..+..+ ++|++|++++|.+++..+..|..+++|++|
T Consensus 11 ~~~c~~~~l~~ip~~l--------~~~l~~L~ls~n~l~~~~~~~~~~l-~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 81 (276)
T 2z62_A 11 TYQCMELNFYKIPDNL--------PFSTKNLDLSFNPLRHLGSYSFFSF-PELQVLDLSRCEIQTIEDGAYQSLSHLSTL 81 (276)
T ss_dssp EEECTTSCCSSCCSSS--------CTTCCEEECTTCCCCEECTTTTTTC-TTCSEEECTTCCCCEECTTTTTTCTTCCEE
T ss_pred eEEecCCCccccCCCC--------CCCccEEECCCCcccccCHhHhccc-cCCcEEECCCCcCCccCHHHccCCcCCCEE
Confidence 3455666666665432 2579999999999998877777776 689999999999998888899999999999
Q ss_pred eeccccccCccccccccccccCeEEeeccccCccCCccccccccccceecccCccccc-CCccccCCCCCCeeeccCCcc
Q 039514 390 VLERNKLTGPISITFGRLQKLQGLYLASNNLVGSFPDELCHIGRLAELALLDNRHSGS-IPSCVSNLTSLRYLYLGSNRF 468 (790)
Q Consensus 390 ~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~-~p~~~~~l~~L~~L~L~~N~l 468 (790)
++++|.+++..+..|..+++|++|++++|.+.+..+..+..+++|++|++++|.+.+. +|..+..+++|++|++++|++
T Consensus 82 ~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l 161 (276)
T 2z62_A 82 ILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKI 161 (276)
T ss_dssp ECTTCCCCEECTTTTTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCC
T ss_pred ECCCCccCccChhhhcCCccccEEECCCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCC
Confidence 9999999998888899999999999999998866555566666666666666655542 355555555555555555555
Q ss_pred ccccCcccccCCCCceEeccCCcccccccccccccccCc----eEeCcCCcccccCcccccCCcccCeeeCCCCcccccC
Q 039514 469 TFVIPSTFWSLKDILFFDFSSNFLVGTLSFDIGNLKVLL----GINLSENNLSGDMPATIGGLKDLQFMDLAYNRLEGPI 544 (790)
Q Consensus 469 ~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~----~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 544 (790)
++. .+..+..++.|+ .|++++|.+++..+..+.. .+|+.|++++|++++..
T Consensus 162 ~~~------------------------~~~~~~~l~~L~~l~l~L~ls~n~l~~~~~~~~~~-~~L~~L~L~~n~l~~~~ 216 (276)
T 2z62_A 162 QSI------------------------YCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKE-IRLKELALDTNQLKSVP 216 (276)
T ss_dssp CEE------------------------CGGGGHHHHTCTTCCEEEECCSSCCCEECTTSSCS-CCEEEEECCSSCCSCCC
T ss_pred CcC------------------------CHHHhhhhhhccccceeeecCCCcccccCccccCC-CcccEEECCCCceeecC
Confidence 544 444444444444 7888888888776666654 48999999999999887
Q ss_pred CccccCCCCCCEEECCCCcCcccC
Q 039514 545 PESFGDLTSLEVLNLSKNKISGSI 568 (790)
Q Consensus 545 p~~~~~l~~L~~L~L~~N~l~~~~ 568 (790)
+..|..+++|+.|++++|++++..
T Consensus 217 ~~~~~~l~~L~~L~l~~N~~~c~c 240 (276)
T 2z62_A 217 DGIFDRLTSLQKIWLHTNPWDCSC 240 (276)
T ss_dssp TTTTTTCCSCCEEECCSSCBCCCT
T ss_pred HhHhcccccccEEEccCCcccccC
Confidence 778899999999999999998643
No 76
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.91 E-value=1.4e-23 Score=214.95 Aligned_cols=186 Identities=22% Similarity=0.213 Sum_probs=139.5
Q ss_pred ccCeEEeeccccCccCCccccccccccceecccCcccccCCccccCCCCCCeeeccCCccccccCcccccCCCCceEecc
Q 039514 409 KLQGLYLASNNLVGSFPDELCHIGRLAELALLDNRHSGSIPSCVSNLTSLRYLYLGSNRFTFVIPSTFWSLKDILFFDFS 488 (790)
Q Consensus 409 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls 488 (790)
+++.|++++|.+.+..+..+..+++|++|++++|.+....+..|..+++|++|++++|+++...+..|..+++|++|+++
T Consensus 38 ~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~ 117 (270)
T 2o6q_A 38 DTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLD 117 (270)
T ss_dssp TCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECC
T ss_pred CCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECC
Confidence 34444444444444333344444445555555554444344445667777777777777777666677777778888888
Q ss_pred CCcccccccccccccccCceEeCcCCcccccCcccccCCcccCeeeCCCCcccccCCccccCCCCCCEEECCCCcCcccC
Q 039514 489 SNFLVGTLSFDIGNLKVLLGINLSENNLSGDMPATIGGLKDLQFMDLAYNRLEGPIPESFGDLTSLEVLNLSKNKISGSI 568 (790)
Q Consensus 489 ~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 568 (790)
+|.+++..+..+..+++|++|+|++|++++..+..|..+++|+.|+|++|++++..+..|..+++|++|++++|++++..
T Consensus 118 ~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 197 (270)
T 2o6q_A 118 RNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVP 197 (270)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCCSCCC
T ss_pred CCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCcccceeEecCCcCcEeChhHhccCCCcCEEECCCCcCCcCC
Confidence 88877777777888888999999999998777777889999999999999999888888999999999999999999777
Q ss_pred CccccccCCCCeEeCCCCcceecCCC
Q 039514 569 PKSMEKLFYLRELNLSFNELEGEIPS 594 (790)
Q Consensus 569 p~~~~~l~~L~~L~Ls~N~l~~~~p~ 594 (790)
+..|..+++|+.|++++|++.+..+.
T Consensus 198 ~~~~~~l~~L~~L~l~~N~~~c~c~~ 223 (270)
T 2o6q_A 198 EGAFDSLEKLKMLQLQENPWDCTCNG 223 (270)
T ss_dssp TTTTTTCTTCCEEECCSSCBCCSSSS
T ss_pred HHHhccccCCCEEEecCCCeeCCCcc
Confidence 77788899999999999999876653
No 77
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.91 E-value=1e-23 Score=213.48 Aligned_cols=193 Identities=23% Similarity=0.345 Sum_probs=169.1
Q ss_pred CCCCCccccccCCCCCcEEEEECCCCCcceeccccCCCCCCCCEEECCCCCCcccCChhhhCCCCCCEEeCCCCCCcccC
Q 039514 38 ASVCTWIGITCDVNSHRVTALDTSQFNLQGTIPSQLGNLSSLTILNLSHNKLSGSVPSSIYTMHTLKFLDFTDNQLSGSV 117 (790)
Q Consensus 38 ~~~c~w~gv~c~~~~~~v~~Ldl~~~~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~ 117 (790)
.+||.|.|..|... .+.+|++++.++ .+|..+. ++++.|+|++|.+.+..+..|..+++|++|+|++|++++..
T Consensus 2 ~~Cp~~~gC~C~~~---~~~l~~~~~~l~-~~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~ 75 (251)
T 3m19_A 2 KTCETVTGCTCNEG---KKEVDCQGKSLD-SVPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLS 75 (251)
T ss_dssp --CHHHHSSEEEGG---GTEEECTTCCCS-SCCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCC
T ss_pred ccCCCCCceEcCCC---CeEEecCCCCcc-ccCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccC
Confidence 35889999999632 346899999988 5677776 59999999999999999999999999999999999999999
Q ss_pred CccccCCCCCcEEEccCccCcccCchhhhccCCCCCEEECCCCcCcccCCcCCCCCCCCCeeecccCcccccCccccccc
Q 039514 118 SSFVFNMSSIVDIRLTNNRLSGELPKNICNYLPHLKALFLDKNMFHGKIPSALSKCKQLQQLNLQLNNLSGAIPKEIGNL 197 (790)
Q Consensus 118 ~~~~~~l~~L~~L~L~~N~l~~~lp~~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l 197 (790)
+..|.++++|++|+|++|+++ .+|...|..+++|++|+|++|.+++..+..|..+++|++|+|++|++++..+..|+.+
T Consensus 76 ~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l 154 (251)
T 3m19_A 76 AGVFDDLTELGTLGLANNQLA-SLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKL 154 (251)
T ss_dssp TTTTTTCTTCCEEECTTSCCC-CCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTC
T ss_pred HhHhccCCcCCEEECCCCccc-ccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcC
Confidence 999999999999999999999 7887778899999999999999998888889999999999999999998888889999
Q ss_pred CCCCceecccccccceEEcccccCccccCccccCCCCCcEEEcccCCCccc
Q 039514 198 TMLKGISLLYNKLQEALVLGMNNLVGVLPATIFNMSTLKVLILINNSLSGS 248 (790)
Q Consensus 198 ~~L~~L~l~~n~l~~~l~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~ 248 (790)
++|++|++++|+ +.+..+..+..+++|+.|++++|.+.+.
T Consensus 155 ~~L~~L~L~~N~-----------l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 194 (251)
T 3m19_A 155 TNLQTLSLSTNQ-----------LQSVPHGAFDRLGKLQTITLFGNQFDCS 194 (251)
T ss_dssp TTCCEEECCSSC-----------CSCCCTTTTTTCTTCCEEECCSCCBCTT
T ss_pred cCCCEEECCCCc-----------CCccCHHHHhCCCCCCEEEeeCCceeCC
Confidence 999986665554 4456677888899999999999998754
No 78
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.90 E-value=4.3e-23 Score=213.11 Aligned_cols=205 Identities=22% Similarity=0.154 Sum_probs=146.6
Q ss_pred hccCCcceeeeccccccCccccccccccccCeEEeeccccCccCCccccccccccceecccCcccccCCccccCCCCCCe
Q 039514 381 SNLSNLLTLVLERNKLTGPISITFGRLQKLQGLYLASNNLVGSFPDELCHIGRLAELALLDNRHSGSIPSCVSNLTSLRY 460 (790)
Q Consensus 381 ~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~ 460 (790)
..+++++++++++|.++..++. + .++++.|++++|.+.+..+..+..+++|+.|++++|.+.+..+. ..+++|++
T Consensus 7 ~~l~~l~~l~~~~~~l~~ip~~-~--~~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~--~~l~~L~~ 81 (290)
T 1p9a_G 7 SKVASHLEVNCDKRNLTALPPD-L--PKDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVD--GTLPVLGT 81 (290)
T ss_dssp ECSTTCCEEECTTSCCSSCCSC-C--CTTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEECC--SCCTTCCE
T ss_pred cccCCccEEECCCCCCCcCCCC-C--CCCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccCC--CCCCcCCE
Confidence 3344445555555544433222 1 13455555555555544445555555555555555555443222 46677888
Q ss_pred eeccCCccccccCcccccCCCCceEeccCCcccccccccccccccCceEeCcCCcccccCcccccCCcccCeeeCCCCcc
Q 039514 461 LYLGSNRFTFVIPSTFWSLKDILFFDFSSNFLVGTLSFDIGNLKVLLGINLSENNLSGDMPATIGGLKDLQFMDLAYNRL 540 (790)
Q Consensus 461 L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l 540 (790)
|++++|+++ .+|..+..+++|+.|++++|++++..+..|..+++|++|+|++|++++..+..|..+++|+.|+|++|++
T Consensus 82 L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l 160 (290)
T 1p9a_G 82 LDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNL 160 (290)
T ss_dssp EECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCC
T ss_pred EECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCCCcC
Confidence 888888777 4566677778888888888888877777888888899999999999888888888899999999999999
Q ss_pred cccCCccccCCCCCCEEECCCCcCcccCCccccccCCCCeEeCCCCcceecC
Q 039514 541 EGPIPESFGDLTSLEVLNLSKNKISGSIPKSMEKLFYLRELNLSFNELEGEI 592 (790)
Q Consensus 541 ~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 592 (790)
+...+..|..+++|+.|+|++|+++ .+|..+..+.+|+.++|++|++.+.+
T Consensus 161 ~~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~l~L~~Np~~C~c 211 (290)
T 1p9a_G 161 TELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWLCNC 211 (290)
T ss_dssp SCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBCCSG
T ss_pred CccCHHHhcCcCCCCEEECCCCcCC-ccChhhcccccCCeEEeCCCCccCcC
Confidence 9777778888999999999999998 67778888889999999999987643
No 79
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.90 E-value=2.6e-23 Score=213.09 Aligned_cols=204 Identities=21% Similarity=0.218 Sum_probs=149.3
Q ss_pred hccCCcceeeeccccccCccccccccccccCeEEeeccccCccCCccccccccccceecccCcccccCCccccCCCCCCe
Q 039514 381 SNLSNLLTLVLERNKLTGPISITFGRLQKLQGLYLASNNLVGSFPDELCHIGRLAELALLDNRHSGSIPSCVSNLTSLRY 460 (790)
Q Consensus 381 ~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~ 460 (790)
..+++|+.|++++|.+.... .+..+++|++|++++|.+.+. ..+..+++|++|++++|.+.+..+..+..+++|++
T Consensus 38 ~~l~~L~~L~l~~~~i~~~~--~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 113 (272)
T 3rfs_A 38 NELNSIDQIIANNSDIKSVQ--GIQYLPNVRYLALGGNKLHDI--SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKE 113 (272)
T ss_dssp HHHTTCCEEECTTSCCCCCT--TGGGCTTCCEEECTTSCCCCC--GGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCE
T ss_pred ccccceeeeeeCCCCccccc--ccccCCCCcEEECCCCCCCCc--hhhcCCCCCCEEECCCCccCccChhHhcCCcCCCE
Confidence 34455555555555544321 244555555555555555532 24555566666666666666555556677777777
Q ss_pred eeccCCccccccCcccccCCCCceEeccCCcccccccccccccccCceEeCcCCcccccCcccccCCcccCeeeCCCCcc
Q 039514 461 LYLGSNRFTFVIPSTFWSLKDILFFDFSSNFLVGTLSFDIGNLKVLLGINLSENNLSGDMPATIGGLKDLQFMDLAYNRL 540 (790)
Q Consensus 461 L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l 540 (790)
|++++|++++..+..|..+++|++|++++|.+++..+..+..+++|+.|++++|++++..+..|..+++|++|++++|++
T Consensus 114 L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l 193 (272)
T 3rfs_A 114 LVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQL 193 (272)
T ss_dssp EECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCC
T ss_pred EECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCCcC
Confidence 77777777777777777777888888888888777777778888888899999998888887888899999999999999
Q ss_pred cccCCccccCCCCCCEEECCCCcCcccCCccccccCCCCeEeCCCCcceecCCCC
Q 039514 541 EGPIPESFGDLTSLEVLNLSKNKISGSIPKSMEKLFYLRELNLSFNELEGEIPSG 595 (790)
Q Consensus 541 ~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~ 595 (790)
++..|..|..+++|+.|++++|.+.+. ++.|+.++++.|.++|.+|..
T Consensus 194 ~~~~~~~~~~l~~L~~L~l~~N~~~~~-------~~~l~~l~~~~n~~~g~ip~~ 241 (272)
T 3rfs_A 194 KSVPDGVFDRLTSLQYIWLHDNPWDCT-------CPGIRYLSEWINKHSGVVRNS 241 (272)
T ss_dssp SCCCTTTTTTCTTCCEEECCSSCBCCC-------TTTTHHHHHHHHHTGGGBBCT
T ss_pred CccCHHHHhCCcCCCEEEccCCCcccc-------CcHHHHHHHHHHhCCCcccCc
Confidence 988888888999999999999988754 446888999999999988864
No 80
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.89 E-value=2e-22 Score=208.01 Aligned_cols=207 Identities=24% Similarity=0.189 Sum_probs=181.8
Q ss_pred ccccccccCeEEeeccccCccCCccccccccccceecccCcccccCCccccCCCCCCeeeccCCccccccCcccccCCCC
Q 039514 403 TFGRLQKLQGLYLASNNLVGSFPDELCHIGRLAELALLDNRHSGSIPSCVSNLTSLRYLYLGSNRFTFVIPSTFWSLKDI 482 (790)
Q Consensus 403 ~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L 482 (790)
.+..+++++.+++++|.++ .+|..+. +.++.|++++|.+.+..+..+..+++|++|++++|.+++..+. ..+++|
T Consensus 5 ~~~~l~~l~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~--~~l~~L 79 (290)
T 1p9a_G 5 EVSKVASHLEVNCDKRNLT-ALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVD--GTLPVL 79 (290)
T ss_dssp EEECSTTCCEEECTTSCCS-SCCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEECC--SCCTTC
T ss_pred cccccCCccEEECCCCCCC-cCCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccCC--CCCCcC
Confidence 3667899999999999998 4565543 6899999999999988889999999999999999999976554 788999
Q ss_pred ceEeccCCcccccccccccccccCceEeCcCCcccccCcccccCCcccCeeeCCCCcccccCCccccCCCCCCEEECCCC
Q 039514 483 LFFDFSSNFLVGTLSFDIGNLKVLLGINLSENNLSGDMPATIGGLKDLQFMDLAYNRLEGPIPESFGDLTSLEVLNLSKN 562 (790)
Q Consensus 483 ~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N 562 (790)
+.|++++|.++ .+|..+..+++|++|++++|+|++..+..|.++++|++|+|++|++++..+..|..+++|+.|+|++|
T Consensus 80 ~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N 158 (290)
T 1p9a_G 80 GTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANN 158 (290)
T ss_dssp CEEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTS
T ss_pred CEEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCCC
Confidence 99999999998 55667889999999999999999888899999999999999999999888888999999999999999
Q ss_pred cCcccCCccccccCCCCeEeCCCCcceecCCCC-cccCCCCcccccCCcCCCCCC
Q 039514 563 KISGSIPKSMEKLFYLRELNLSFNELEGEIPSG-GIFANFTAESFMGNELLCGLP 616 (790)
Q Consensus 563 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~-~~~~~~~~~~~~~n~~l~~~p 616 (790)
++++..+..|..+++|+.|+|++|+++. +|.. .....+..+.+.+|++.|++.
T Consensus 159 ~l~~l~~~~~~~l~~L~~L~L~~N~l~~-ip~~~~~~~~L~~l~L~~Np~~C~c~ 212 (290)
T 1p9a_G 159 NLTELPAGLLNGLENLDTLLLQENSLYT-IPKGFFGSHLLPFAFLHGNPWLCNCE 212 (290)
T ss_dssp CCSCCCTTTTTTCTTCCEEECCSSCCCC-CCTTTTTTCCCSEEECCSCCBCCSGG
T ss_pred cCCccCHHHhcCcCCCCEEECCCCcCCc-cChhhcccccCCeEEeCCCCccCcCc
Confidence 9997777778999999999999999985 5543 334456777888999988753
No 81
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.89 E-value=1.2e-22 Score=208.24 Aligned_cols=177 Identities=23% Similarity=0.328 Sum_probs=108.2
Q ss_pred cEEEEECCCCCcceeccccCCCCCCCCEEECCCCCCcccCChhhhCCCCCCEEeCCCCCCcccCCccccCCCCCcEEEcc
Q 039514 54 RVTALDTSQFNLQGTIPSQLGNLSSLTILNLSHNKLSGSVPSSIYTMHTLKFLDFTDNQLSGSVSSFVFNMSSIVDIRLT 133 (790)
Q Consensus 54 ~v~~Ldl~~~~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~ 133 (790)
+++.|+++++.++. .+.+..+++|++|++++|.+.+. ..+..+++|++|+|++|++++..+..|.++++|++|+++
T Consensus 42 ~L~~L~l~~~~i~~--~~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 117 (272)
T 3rfs_A 42 SIDQIIANNSDIKS--VQGIQYLPNVRYLALGGNKLHDI--SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLV 117 (272)
T ss_dssp TCCEEECTTSCCCC--CTTGGGCTTCCEEECTTSCCCCC--GGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECT
T ss_pred ceeeeeeCCCCccc--ccccccCCCCcEEECCCCCCCCc--hhhcCCCCCCEEECCCCccCccChhHhcCCcCCCEEECC
Confidence 45566666666553 23466666666677666666642 356666666666666666666666666666666666666
Q ss_pred CccCcccCchhhhccCCCCCEEECCCCcCcccCCcCCCCCCCCCeeecccCcccccCcccccccCCCCceecccccccce
Q 039514 134 NNRLSGELPKNICNYLPHLKALFLDKNMFHGKIPSALSKCKQLQQLNLQLNNLSGAIPKEIGNLTMLKGISLLYNKLQEA 213 (790)
Q Consensus 134 ~N~l~~~lp~~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~ 213 (790)
+|+++ .+|...+..+++|++|++++|.+++..+..|..+++|++|++++|++++..+..|+.+++|++|++++|
T Consensus 118 ~n~l~-~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N----- 191 (272)
T 3rfs_A 118 ENQLQ-SLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQN----- 191 (272)
T ss_dssp TSCCC-CCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS-----
T ss_pred CCcCC-ccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCC-----
Confidence 66666 455555556666666666666666666666666666666666666666555555666666666443333
Q ss_pred EEcccccCccccCccccCCCCCcEEEcccCCCc
Q 039514 214 LVLGMNNLVGVLPATIFNMSTLKVLILINNSLS 246 (790)
Q Consensus 214 l~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~ 246 (790)
.+.+..|..+..+++|+.|++++|.+.
T Consensus 192 ------~l~~~~~~~~~~l~~L~~L~l~~N~~~ 218 (272)
T 3rfs_A 192 ------QLKSVPDGVFDRLTSLQYIWLHDNPWD 218 (272)
T ss_dssp ------CCSCCCTTTTTTCTTCCEEECCSSCBC
T ss_pred ------cCCccCHHHHhCCcCCCEEEccCCCcc
Confidence 333344455555666666666666554
No 82
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.88 E-value=1.1e-22 Score=212.96 Aligned_cols=227 Identities=19% Similarity=0.193 Sum_probs=132.7
Q ss_pred CCCEEEccCCCCcccCCch---hhhhcccCcEEEeecCcCcccCchhh--hccCCcceeeeccccccCccc----ccccc
Q 039514 336 KLRSLKLAGNPLDGFLPSS---IGNLSKSLETLVIANCSISGNIPQAI--SNLSNLLTLVLERNKLTGPIS----ITFGR 406 (790)
Q Consensus 336 ~L~~L~Ls~n~l~~~~p~~---~~~l~~~L~~L~l~~n~l~~~~p~~~--~~l~~L~~L~L~~N~l~~~~~----~~~~~ 406 (790)
.++.+.+.++.+....-.. +... ++|++|++++|.+.+..|..+ ..+++|++|++++|.+++..+ ..+..
T Consensus 65 ~l~~l~l~~~~~~~~~~~~~~~~~~~-~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~ 143 (310)
T 4glp_A 65 RVRRLTVGAAQVPAQLLVGALRVLAY-SRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWL 143 (310)
T ss_dssp CCCEEEECSCCCBHHHHHHHHHHHHH-SCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTB
T ss_pred ceeEEEEeCCcCCHHHHHHHHHhccc-CceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhh
Confidence 4677777776664321111 1111 346677777776666666665 666666666666666664322 22334
Q ss_pred ccccCeEEeeccccCccCCccccccccccceecccCcccccCCccccCCCCCCeeeccCCcccccc-CcccccCCCCceE
Q 039514 407 LQKLQGLYLASNNLVGSFPDELCHIGRLAELALLDNRHSGSIPSCVSNLTSLRYLYLGSNRFTFVI-PSTFWSLKDILFF 485 (790)
Q Consensus 407 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~L~~N~l~~~~-~~~~~~l~~L~~L 485 (790)
+++|++|++++|.+.+..+..+..+++|++|++++|++.+.. +.. +..+..+++|++|
T Consensus 144 ~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~---------------------~~~~~~~~~~l~~L~~L 202 (310)
T 4glp_A 144 KPGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGER---------------------GLMAALCPHKFPAIQNL 202 (310)
T ss_dssp CSCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHH---------------------HHHTTSCTTSSCCCCSC
T ss_pred ccCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccch---------------------hhhHHHhhhcCCCCCEE
Confidence 556666666666665555555555555555555555443210 011 1112344445555
Q ss_pred eccCCccccccc--c-cccccccCceEeCcCCcccccCcccccCC---cccCeeeCCCCcccccCCccccCCCCCCEEEC
Q 039514 486 DFSSNFLVGTLS--F-DIGNLKVLLGINLSENNLSGDMPATIGGL---KDLQFMDLAYNRLEGPIPESFGDLTSLEVLNL 559 (790)
Q Consensus 486 ~ls~N~l~~~~~--~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l---~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 559 (790)
++++|+++.... . .+..+++|++|+|++|++.+..|..+..+ ++|++|+|++|+++ .+|..+. ++|++|+|
T Consensus 203 ~Ls~N~l~~l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~--~~L~~L~L 279 (310)
T 4glp_A 203 ALRNTGMETPTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVPKGLP--AKLRVLDL 279 (310)
T ss_dssp BCCSSCCCCHHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCSCCC--SCCSCEEC
T ss_pred ECCCCCCCchHHHHHHHHhcCCCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC-chhhhhc--CCCCEEEC
Confidence 555555432211 1 23566777777777777777666666655 58888888888888 4565553 68888888
Q ss_pred CCCcCcccCCccccccCCCCeEeCCCCcce
Q 039514 560 SKNKISGSIPKSMEKLFYLRELNLSFNELE 589 (790)
Q Consensus 560 ~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 589 (790)
++|++++. |. +..+++|+.|++++|+++
T Consensus 280 s~N~l~~~-~~-~~~l~~L~~L~L~~N~l~ 307 (310)
T 4glp_A 280 SSNRLNRA-PQ-PDELPEVDNLTLDGNPFL 307 (310)
T ss_dssp CSCCCCSC-CC-TTSCCCCSCEECSSTTTS
T ss_pred CCCcCCCC-ch-hhhCCCccEEECcCCCCC
Confidence 88888853 33 567788888888888875
No 83
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.88 E-value=8e-24 Score=226.66 Aligned_cols=250 Identities=18% Similarity=0.163 Sum_probs=142.2
Q ss_pred EccCCCCcccCCchhhhhcccCcEEEeecCcCcccCc----hhhhccC-CcceeeeccccccCccccccccc-----ccc
Q 039514 341 KLAGNPLDGFLPSSIGNLSKSLETLVIANCSISGNIP----QAISNLS-NLLTLVLERNKLTGPISITFGRL-----QKL 410 (790)
Q Consensus 341 ~Ls~n~l~~~~p~~~~~l~~~L~~L~l~~n~l~~~~p----~~~~~l~-~L~~L~L~~N~l~~~~~~~~~~l-----~~L 410 (790)
+++.|.+++.+|..+. .+++|++|++++|.+++..+ ..+..++ +|++|+|++|.+++..+..+..+ ++|
T Consensus 4 ~ls~n~~~~~~~~~~~-~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L 82 (362)
T 3goz_A 4 KLTLHPGSNPVEEFTS-IPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANV 82 (362)
T ss_dssp ECCCCTTCCHHHHHHT-SCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTC
T ss_pred ccccccchHHHHHHHh-CCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCc
Confidence 3444444444433222 22345555555555554444 4444455 55555555555554444444433 555
Q ss_pred CeEEeeccccCccCCcccccc-----ccccceecccCcccccCCccc----cC-CCCCCeeeccCCcccccc----Cccc
Q 039514 411 QGLYLASNNLVGSFPDELCHI-----GRLAELALLDNRHSGSIPSCV----SN-LTSLRYLYLGSNRFTFVI----PSTF 476 (790)
Q Consensus 411 ~~L~L~~n~l~~~~~~~~~~l-----~~L~~L~l~~n~~~~~~p~~~----~~-l~~L~~L~L~~N~l~~~~----~~~~ 476 (790)
++|++++|.+++..+..+... ++|++|++++|++.+..+..+ .. .++|++|+|++|+++... +..+
T Consensus 83 ~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l 162 (362)
T 3goz_A 83 TSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQIL 162 (362)
T ss_dssp CEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHHH
T ss_pred cEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHHH
Confidence 555555555554444433222 455555665555554433322 22 246777777777776432 2333
Q ss_pred ccCC-CCceEeccCCcccccccccccc----c-ccCceEeCcCCccccc----CcccccC-CcccCeeeCCCCcccccCC
Q 039514 477 WSLK-DILFFDFSSNFLVGTLSFDIGN----L-KVLLGINLSENNLSGD----MPATIGG-LKDLQFMDLAYNRLEGPIP 545 (790)
Q Consensus 477 ~~l~-~L~~L~ls~N~l~~~~~~~~~~----l-~~L~~L~Ls~N~l~~~----~~~~~~~-l~~L~~L~Ls~N~l~~~~p 545 (790)
...+ +|+.|++++|.+++..+..+.. . +.|++|+|++|.|++. ++..+.. .++|++|+|++|.+++..+
T Consensus 163 ~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~ 242 (362)
T 3goz_A 163 AAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFSSIPNHVVSLNLCLNCLHGPSL 242 (362)
T ss_dssp HTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHHSCTTCCEEECCSSCCCCCCH
T ss_pred hcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHHHHhcCCCCceEEECcCCCCCcHHH
Confidence 3443 6777777777776655544333 3 4777888888877752 3444444 3578888888888876544
Q ss_pred ----ccccCCCCCCEEECCCCcCccc-------CCccccccCCCCeEeCCCCcceec
Q 039514 546 ----ESFGDLTSLEVLNLSKNKISGS-------IPKSMEKLFYLRELNLSFNELEGE 591 (790)
Q Consensus 546 ----~~~~~l~~L~~L~L~~N~l~~~-------~p~~~~~l~~L~~L~Ls~N~l~~~ 591 (790)
..+..+++|++|+|++|.+.+. ++..+..+++|+.||+++|++...
T Consensus 243 ~~l~~~~~~l~~L~~L~L~~n~l~~i~~~~~~~l~~~~~~l~~L~~LdL~~N~l~~~ 299 (362)
T 3goz_A 243 ENLKLLKDSLKHLQTVYLDYDIVKNMSKEQCKALGAAFPNIQKIILVDKNGKEIHPS 299 (362)
T ss_dssp HHHHHTTTTTTTCSEEEEEHHHHTTCCHHHHHHHHTTSTTCCEEEEECTTSCBCCGG
T ss_pred HHHHHHHhcCCCccEEEeccCCccccCHHHHHHHHHHhccCCceEEEecCCCcCCCc
Confidence 3456677888888888874432 334566777888888888887654
No 84
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.88 E-value=4.3e-22 Score=200.00 Aligned_cols=200 Identities=20% Similarity=0.251 Sum_probs=117.5
Q ss_pred ccCcEEEeecCcCcccCchhhhccCCcceeeecccc-ccCccccccccccccCeEEeec-cccCccCCccccccccccce
Q 039514 360 KSLETLVIANCSISGNIPQAISNLSNLLTLVLERNK-LTGPISITFGRLQKLQGLYLAS-NNLVGSFPDELCHIGRLAEL 437 (790)
Q Consensus 360 ~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~-l~~~~~~~~~~l~~L~~L~L~~-n~l~~~~~~~~~~l~~L~~L 437 (790)
.+|++|++++|++++..+..|..+++|++|++++|+ ++++.+..|..+++|++|++++ |.+++..+..|..+++|++|
T Consensus 31 ~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L 110 (239)
T 2xwt_C 31 PSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFL 110 (239)
T ss_dssp TTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEE
T ss_pred CcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEE
Confidence 356777777777776666667777777777777775 6666666666677777777776 66665444455555555555
Q ss_pred ecccCcccccCCccccCCCCCCeeeccCCccccccCcccccCCCCceEeccCC-cccccccccccccccCc-eEeCcCCc
Q 039514 438 ALLDNRHSGSIPSCVSNLTSLRYLYLGSNRFTFVIPSTFWSLKDILFFDFSSN-FLVGTLSFDIGNLKVLL-GINLSENN 515 (790)
Q Consensus 438 ~l~~n~~~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N-~l~~~~~~~~~~l~~L~-~L~Ls~N~ 515 (790)
++++|++.+ +|. +..+++|+ .|+.|++++| .+++..+..|.++++|+ +|++++|+
T Consensus 111 ~l~~n~l~~-lp~-~~~l~~L~---------------------~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~ 167 (239)
T 2xwt_C 111 GIFNTGLKM-FPD-LTKVYSTD---------------------IFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNG 167 (239)
T ss_dssp EEEEECCCS-CCC-CTTCCBCC---------------------SEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCC
T ss_pred eCCCCCCcc-ccc-cccccccc---------------------cccEEECCCCcchhhcCcccccchhcceeEEEcCCCC
Confidence 555555443 333 44444444 0004444444 44444444455555566 66666666
Q ss_pred ccccCcccccCCcccCeeeCCCCc-ccccCCccccCC-CCCCEEECCCCcCcccCCccccccCCCCeEeCCCC
Q 039514 516 LSGDMPATIGGLKDLQFMDLAYNR-LEGPIPESFGDL-TSLEVLNLSKNKISGSIPKSMEKLFYLRELNLSFN 586 (790)
Q Consensus 516 l~~~~~~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~l-~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N 586 (790)
++.+.+..|.. ++|+.|++++|+ +++..+..|.++ ++|+.|++++|++++ +|.. .+++|+.|+++++
T Consensus 168 l~~i~~~~~~~-~~L~~L~L~~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~-l~~~--~~~~L~~L~l~~~ 236 (239)
T 2xwt_C 168 FTSVQGYAFNG-TKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVTA-LPSK--GLEHLKELIARNT 236 (239)
T ss_dssp CCEECTTTTTT-CEEEEEECTTCTTCCEECTTTTTTCSBCCSEEECTTCCCCC-CCCT--TCTTCSEEECTTC
T ss_pred CcccCHhhcCC-CCCCEEEcCCCCCcccCCHHHhhccccCCcEEECCCCcccc-CChh--HhccCceeeccCc
Confidence 65444444444 566677777773 665556666666 677777777777764 3332 4556667766654
No 85
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.88 E-value=4.6e-22 Score=208.12 Aligned_cols=230 Identities=19% Similarity=0.188 Sum_probs=159.4
Q ss_pred CCccccccCCcccCCCCcccccccCCCCCCCCEEEccCCCCcccCCchh--hhhcccCcEEEeecCcCcccCc----hhh
Q 039514 307 NLEWLNLSKNSLTSSTSKLSFLSSLANCKKLRSLKLAGNPLDGFLPSSI--GNLSKSLETLVIANCSISGNIP----QAI 380 (790)
Q Consensus 307 ~L~~L~Ls~n~l~~~~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~~--~~l~~~L~~L~l~~n~l~~~~p----~~~ 380 (790)
.++.+.+.++.+.... +.....+..+++|++|++++|.+.+..|..+ ..+ ++|++|++++|.+++..+ ..+
T Consensus 65 ~l~~l~l~~~~~~~~~--~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~-~~L~~L~Ls~n~i~~~~~~~~~~~~ 141 (310)
T 4glp_A 65 RVRRLTVGAAQVPAQL--LVGALRVLAYSRLKELTLEDLKITGTMPPLPLEATG-LALSSLRLRNVSWATGRSWLAELQQ 141 (310)
T ss_dssp CCCEEEECSCCCBHHH--HHHHHHHHHHSCCCEEEEESCCCBSCCCCCSSSCCC-BCCSSCEEESCCCSSTTSSHHHHHT
T ss_pred ceeEEEEeCCcCCHHH--HHHHHHhcccCceeEEEeeCCEeccchhhhhhhccC-CCCCEEEeecccccchhhhhHHHHh
Confidence 4667777777664311 0001112234679999999999999888877 555 689999999999997655 445
Q ss_pred hccCCcceeeeccccccCccccccccccccCeEEeeccccCcc--CCccccccccccceecccCcccccCCccccCCCCC
Q 039514 381 SNLSNLLTLVLERNKLTGPISITFGRLQKLQGLYLASNNLVGS--FPDELCHIGRLAELALLDNRHSGSIPSCVSNLTSL 458 (790)
Q Consensus 381 ~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~--~~~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L 458 (790)
..+++|++|++++|.+.+..+..|..+++|++|++++|++.+. ++. +..+..+++|
T Consensus 142 ~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~----------------------~~~~~~l~~L 199 (310)
T 4glp_A 142 WLKPGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMA----------------------ALCPHKFPAI 199 (310)
T ss_dssp TBCSCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHT----------------------TSCTTSSCCC
T ss_pred hhccCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhH----------------------HHhhhcCCCC
Confidence 6799999999999999999989999999999999999998642 111 1112234455
Q ss_pred CeeeccCCccccccCc---ccccCCCCceEeccCCccccccccccccc---ccCceEeCcCCcccccCcccccCCcccCe
Q 039514 459 RYLYLGSNRFTFVIPS---TFWSLKDILFFDFSSNFLVGTLSFDIGNL---KVLLGINLSENNLSGDMPATIGGLKDLQF 532 (790)
Q Consensus 459 ~~L~L~~N~l~~~~~~---~~~~l~~L~~L~ls~N~l~~~~~~~~~~l---~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 532 (790)
++|++++|+++...+. .+..+++|++|++++|.+++..|..+..+ ++|++|+|++|+|+ .+|..+. ++|++
T Consensus 200 ~~L~Ls~N~l~~l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~--~~L~~ 276 (310)
T 4glp_A 200 QNLALRNTGMETPTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVPKGLP--AKLRV 276 (310)
T ss_dssp CSCBCCSSCCCCHHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCSCCC--SCCSC
T ss_pred CEEECCCCCCCchHHHHHHHHhcCCCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC-chhhhhc--CCCCE
Confidence 5555555555422111 23445566666666666665555444444 57888888888887 4455553 78888
Q ss_pred eeCCCCcccccCCccccCCCCCCEEECCCCcCcc
Q 039514 533 MDLAYNRLEGPIPESFGDLTSLEVLNLSKNKISG 566 (790)
Q Consensus 533 L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 566 (790)
|+|++|++++. |. +..+++|+.|+|++|+++.
T Consensus 277 L~Ls~N~l~~~-~~-~~~l~~L~~L~L~~N~l~~ 308 (310)
T 4glp_A 277 LDLSSNRLNRA-PQ-PDELPEVDNLTLDGNPFLV 308 (310)
T ss_dssp EECCSCCCCSC-CC-TTSCCCCSCEECSSTTTSC
T ss_pred EECCCCcCCCC-ch-hhhCCCccEEECcCCCCCC
Confidence 88888888864 33 6777888999999998863
No 86
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.87 E-value=2.3e-23 Score=223.09 Aligned_cols=267 Identities=17% Similarity=0.164 Sum_probs=170.7
Q ss_pred EECCCCCcceeccccCCCCCCCCEEECCCCCCcccCC----hhhhCCC-CCCEEeCCCCCCcccCCccccCC-----CCC
Q 039514 58 LDTSQFNLQGTIPSQLGNLSSLTILNLSHNKLSGSVP----SSIYTMH-TLKFLDFTDNQLSGSVSSFVFNM-----SSI 127 (790)
Q Consensus 58 Ldl~~~~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~----~~~~~l~-~L~~L~Ls~n~l~~~~~~~~~~l-----~~L 127 (790)
.+++.++++|.+|..+...++|++|||++|.+++..+ .+|..++ +|++|+|++|++.+..+..+..+ ++|
T Consensus 3 ~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L 82 (362)
T 3goz_A 3 YKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANV 82 (362)
T ss_dssp EECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTC
T ss_pred cccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCc
Confidence 5788888888888877777779999999999887776 7788888 89999999998888777777765 888
Q ss_pred cEEEccCccCcccCchhhh---ccC-CCCCEEECCCCcCcccCCcCC----CC-CCCCCeeecccCcccccCccc----c
Q 039514 128 VDIRLTNNRLSGELPKNIC---NYL-PHLKALFLDKNMFHGKIPSAL----SK-CKQLQQLNLQLNNLSGAIPKE----I 194 (790)
Q Consensus 128 ~~L~L~~N~l~~~lp~~~~---~~l-~~L~~L~L~~N~i~~~~p~~~----~~-l~~L~~L~L~~N~l~~~~~~~----~ 194 (790)
++|+|++|.+++..+..+. ..+ ++|++|+|++|.+++..+..+ .. .++|++|+|++|.++...... +
T Consensus 83 ~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l 162 (362)
T 3goz_A 83 TSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQIL 162 (362)
T ss_dssp CEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHHH
T ss_pred cEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHHH
Confidence 8888888888755554432 233 788888888888876655443 33 257888888888887543333 3
Q ss_pred cccC-CCCceecccccccceEEcccccCccccCc----cccCC-CCCcEEEcccCCCcccCCcchhcCCCCcceEeecCC
Q 039514 195 GNLT-MLKGISLLYNKLQEALVLGMNNLVGVLPA----TIFNM-STLKVLILINNSLSGSLPSRIDLSLPTVEVLILALN 268 (790)
Q Consensus 195 ~~l~-~L~~L~l~~n~l~~~l~l~~n~l~~~~p~----~~~~l-~~L~~L~L~~n~l~~~~p~~~~~~l~~L~~L~L~~n 268 (790)
..++ +|++|++++|.+. +..+. .+..+ ++|++|+|++|.++..-..
T Consensus 163 ~~~~~~L~~L~Ls~n~l~-----------~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~----------------- 214 (362)
T 3goz_A 163 AAIPANVNSLNLRGNNLA-----------SKNCAELAKFLASIPASVTSLDLSANLLGLKSYA----------------- 214 (362)
T ss_dssp HTSCTTCCEEECTTSCGG-----------GSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHH-----------------
T ss_pred hcCCccccEeeecCCCCc-----------hhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHH-----------------
Confidence 3333 5666554444433 22222 22233 3566666666655421110
Q ss_pred cccccCCccccC-CCCCCEEeccCCcccccCc----ccccCCCCCccccccCCcccCCCCc--ccccccCCCCCCCCEEE
Q 039514 269 RFFGTIPSSITN-ASKLTVLELGGNTFSGLIP----DTIGNLRNLEWLNLSKNSLTSSTSK--LSFLSSLANCKKLRSLK 341 (790)
Q Consensus 269 ~~~~~~p~~~~~-l~~L~~L~l~~n~l~~~~~----~~~~~l~~L~~L~Ls~n~l~~~~~~--~~~~~~l~~l~~L~~L~ 341 (790)
.++..+.. .++|++|++++|.+++..+ ..+..+++|++|++++|.+..+... ......+..+++|+.|+
T Consensus 215 ----~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~~~~l~~L~~L~L~~n~l~~i~~~~~~~l~~~~~~l~~L~~Ld 290 (362)
T 3goz_A 215 ----ELAYIFSSIPNHVVSLNLCLNCLHGPSLENLKLLKDSLKHLQTVYLDYDIVKNMSKEQCKALGAAFPNIQKIILVD 290 (362)
T ss_dssp ----HHHHHHHHSCTTCCEEECCSSCCCCCCHHHHHHTTTTTTTCSEEEEEHHHHTTCCHHHHHHHHTTSTTCCEEEEEC
T ss_pred ----HHHHHHhcCCCCceEEECcCCCCCcHHHHHHHHHHhcCCCccEEEeccCCccccCHHHHHHHHHHhccCCceEEEe
Confidence 12233333 3467777777777665433 2345567777777777775544321 01123466778888889
Q ss_pred ccCCCCcccCCchhh
Q 039514 342 LAGNPLDGFLPSSIG 356 (790)
Q Consensus 342 Ls~n~l~~~~p~~~~ 356 (790)
+++|.+....+..+.
T Consensus 291 L~~N~l~~~~~~~~~ 305 (362)
T 3goz_A 291 KNGKEIHPSHSIPIS 305 (362)
T ss_dssp TTSCBCCGGGCHHHH
T ss_pred cCCCcCCCcchHHHH
Confidence 999988766554443
No 87
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.87 E-value=1.1e-21 Score=198.48 Aligned_cols=161 Identities=21% Similarity=0.220 Sum_probs=119.5
Q ss_pred cccceecccCcccccCCccccCCCCCCeeeccCCccccccCcccccCCCCceEeccCCcccccccccccccccCceEeCc
Q 039514 433 RLAELALLDNRHSGSIPSCVSNLTSLRYLYLGSNRFTFVIPSTFWSLKDILFFDFSSNFLVGTLSFDIGNLKVLLGINLS 512 (790)
Q Consensus 433 ~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls 512 (790)
.++.|++++|.+.+..+..+.++++|++|+|++|++++..+..|..+++|++|++++|.+++..+..+..+++|++|+|+
T Consensus 36 ~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 115 (251)
T 3m19_A 36 DTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLG 115 (251)
T ss_dssp TCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEcC
Confidence 44445555555554455556666666666666666666666666666777777777777766666667777888888888
Q ss_pred CCcccccCcccccCCcccCeeeCCCCcccccCCccccCCCCCCEEECCCCcCcccCCccccccCCCCeEeCCCCcceecC
Q 039514 513 ENNLSGDMPATIGGLKDLQFMDLAYNRLEGPIPESFGDLTSLEVLNLSKNKISGSIPKSMEKLFYLRELNLSFNELEGEI 592 (790)
Q Consensus 513 ~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 592 (790)
+|+|++..+..|.++++|++|+|++|++++..+..|+.+++|++|+|++|++++..+..|..+++|+.|++++|++.+..
T Consensus 116 ~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~~ 195 (251)
T 3m19_A 116 GNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDCSR 195 (251)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCTTS
T ss_pred CCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCceeCCc
Confidence 88888777777788888888888888888777777888888888888888888777778888888888888888887654
Q ss_pred C
Q 039514 593 P 593 (790)
Q Consensus 593 p 593 (790)
+
T Consensus 196 ~ 196 (251)
T 3m19_A 196 C 196 (251)
T ss_dssp T
T ss_pred c
Confidence 4
No 88
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.87 E-value=6.3e-22 Score=198.74 Aligned_cols=195 Identities=16% Similarity=0.157 Sum_probs=142.2
Q ss_pred CcceeeeccccccCccccccccccccCeEEeeccc-cCccCCccccccccccceecccCcccccCCccccCCCCCCeeec
Q 039514 385 NLLTLVLERNKLTGPISITFGRLQKLQGLYLASNN-LVGSFPDELCHIGRLAELALLDNRHSGSIPSCVSNLTSLRYLYL 463 (790)
Q Consensus 385 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~-l~~~~~~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~L 463 (790)
+|++|++++|++++..+..|..+++|++|++++|. ++ ...+..|.++++|++|++
T Consensus 32 ~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~------------------------~i~~~~f~~l~~L~~L~l 87 (239)
T 2xwt_C 32 STQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQ------------------------QLESHSFYNLSKVTHIEI 87 (239)
T ss_dssp TCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCC------------------------EECTTTEESCTTCCEEEE
T ss_pred cccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcc------------------------eeCHhHcCCCcCCcEEEC
Confidence 55556666655555555555555555555555554 44 333445566666666666
Q ss_pred cC-CccccccCcccccCCCCceEeccCCcccccccccccccccCc---eEeCcCC-cccccCcccccCCcccC-eeeCCC
Q 039514 464 GS-NRFTFVIPSTFWSLKDILFFDFSSNFLVGTLSFDIGNLKVLL---GINLSEN-NLSGDMPATIGGLKDLQ-FMDLAY 537 (790)
Q Consensus 464 ~~-N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~---~L~Ls~N-~l~~~~~~~~~~l~~L~-~L~Ls~ 537 (790)
++ |+++++.+..|..+++|+.|++++|.+++. |. +..+++|+ +|++++| +++++.+..|.++++|+ .|++++
T Consensus 88 ~~~n~l~~i~~~~f~~l~~L~~L~l~~n~l~~l-p~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~ 165 (239)
T 2xwt_C 88 RNTRNLTYIDPDALKELPLLKFLGIFNTGLKMF-PD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYN 165 (239)
T ss_dssp EEETTCCEECTTSEECCTTCCEEEEEEECCCSC-CC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCS
T ss_pred CCCCCeeEcCHHHhCCCCCCCEEeCCCCCCccc-cc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCC
Confidence 66 666666666666777777777777777653 33 66777777 9999999 99988888899999999 999999
Q ss_pred CcccccCCccccCCCCCCEEECCCCc-CcccCCcccccc-CCCCeEeCCCCcceecCCCCcccCCCCcccccC
Q 039514 538 NRLEGPIPESFGDLTSLEVLNLSKNK-ISGSIPKSMEKL-FYLRELNLSFNELEGEIPSGGIFANFTAESFMG 608 (790)
Q Consensus 538 N~l~~~~p~~~~~l~~L~~L~L~~N~-l~~~~p~~~~~l-~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~~~~~ 608 (790)
|+++...+..|.. ++|+.|++++|+ +++..+..|..+ ++|+.|++++|++++ +|.. .+..++...+.+
T Consensus 166 n~l~~i~~~~~~~-~~L~~L~L~~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~-l~~~-~~~~L~~L~l~~ 235 (239)
T 2xwt_C 166 NGFTSVQGYAFNG-TKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVTA-LPSK-GLEHLKELIARN 235 (239)
T ss_dssp CCCCEECTTTTTT-CEEEEEECTTCTTCCEECTTTTTTCSBCCSEEECTTCCCCC-CCCT-TCTTCSEEECTT
T ss_pred CCCcccCHhhcCC-CCCCEEEcCCCCCcccCCHHHhhccccCCcEEECCCCcccc-CChh-HhccCceeeccC
Confidence 9999666666666 899999999995 998778889999 999999999999985 4543 455666555444
No 89
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.87 E-value=2.4e-23 Score=220.99 Aligned_cols=288 Identities=17% Similarity=0.229 Sum_probs=179.8
Q ss_pred HHHHHHHhhcCCCCCccccCCCCCCCCCCCccccccCCCCCcEEEEECCCCCcceeccccCCCC--CCCCEEECCCCCCc
Q 039514 13 QALLALKDHIISDPTNLLAHNWTSNASVCTWIGITCDVNSHRVTALDTSQFNLQGTIPSQLGNL--SSLTILNLSHNKLS 90 (790)
Q Consensus 13 ~~l~~~~~~~~~~~~~~~~~~w~~~~~~c~w~gv~c~~~~~~v~~Ldl~~~~l~~~~~~~~~~l--~~L~~L~Ls~N~i~ 90 (790)
+.+..+...+. .. .+. ....-|.+|.++.|+. ..++.+|++++.+. |..+..+ ++++.|++++|.+.
T Consensus 15 eil~~If~~L~--~~-d~~---~~~~vc~~W~~~~~~~--~~~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~ 83 (336)
T 2ast_B 15 ELLLGIFSCLC--LP-ELL---KVSGVCKRWYRLASDE--SLWQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMD 83 (336)
T ss_dssp HHHHHHHTTSC--HH-HHH---HTTSSCHHHHHHHTCS--TTSSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEEC
T ss_pred HHHHHHHHhCC--HH-HHH---HHHHHHHHHHHHhcCc--hhheeeccccccCC---HHHHHhhhhccceEEEcCCcccc
Confidence 35667776662 11 111 2234466899999874 35778899988776 4556666 78899999999888
Q ss_pred ccCChhhhCCCCCCEEeCCCCCCccc-CCccccCCCCCcEEEccCccCcccCchhhhccCCCCCEEECCCC-cCccc-CC
Q 039514 91 GSVPSSIYTMHTLKFLDFTDNQLSGS-VSSFVFNMSSIVDIRLTNNRLSGELPKNICNYLPHLKALFLDKN-MFHGK-IP 167 (790)
Q Consensus 91 ~~~~~~~~~l~~L~~L~Ls~n~l~~~-~~~~~~~l~~L~~L~L~~N~l~~~lp~~~~~~l~~L~~L~L~~N-~i~~~-~p 167 (790)
+..+. +..+++|++|+|++|.+++. .+..+..+++|++|++++|.+++.+|..+ ..+++|++|+|++| .+++. ++
T Consensus 84 ~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l-~~~~~L~~L~L~~~~~l~~~~l~ 161 (336)
T 2ast_B 84 QPLAE-HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTL-AKNSNLVRLNLSGCSGFSEFALQ 161 (336)
T ss_dssp SCCCS-CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHH-TTCTTCSEEECTTCBSCCHHHHH
T ss_pred ccchh-hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHH-hcCCCCCEEECCCCCCCCHHHHH
Confidence 77665 45688899999998888765 77778888888888888888876666655 55888888888888 56652 55
Q ss_pred cCCCCCCCCCeeecccC-ccccc-CcccccccC-CCCceecccccccceEEcccccCc-cccCccccCCCCCcEEEcccC
Q 039514 168 SALSKCKQLQQLNLQLN-NLSGA-IPKEIGNLT-MLKGISLLYNKLQEALVLGMNNLV-GVLPATIFNMSTLKVLILINN 243 (790)
Q Consensus 168 ~~~~~l~~L~~L~L~~N-~l~~~-~~~~~~~l~-~L~~L~l~~n~l~~~l~l~~n~l~-~~~p~~~~~l~~L~~L~L~~n 243 (790)
..+.++++|++|++++| .+++. ++..+..++ +|++|++++|.+ .++ +.+|..+..+++|+.|++++|
T Consensus 162 ~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~~~~~---------~~~~~~l~~~~~~~~~L~~L~l~~~ 232 (336)
T 2ast_B 162 TLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRK---------NLQKSDLSTLVRRCPNLVHLDLSDS 232 (336)
T ss_dssp HHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGG---------GSCHHHHHHHHHHCTTCSEEECTTC
T ss_pred HHHhcCCCCCEEcCCCCCCcChHHHHHHHHhcccCCCEEEeCCCcc---------cCCHHHHHHHHhhCCCCCEEeCCCC
Confidence 56777888888888888 77653 456667777 777766655531 111 234445556666666666666
Q ss_pred C-CcccCCcchhcCCCCcceEeecCCcccccCCccccCCCCCCEEeccCCc-ccccCcccccCCCCCccccccCCcccCC
Q 039514 244 S-LSGSLPSRIDLSLPTVEVLILALNRFFGTIPSSITNASKLTVLELGGNT-FSGLIPDTIGNLRNLEWLNLSKNSLTSS 321 (790)
Q Consensus 244 ~-l~~~~p~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~l~~n~-l~~~~~~~~~~l~~L~~L~Ls~n~l~~~ 321 (790)
. +++.. +..+..+++|+.|++++|. +.......+..+++|+.|++++| +...
T Consensus 233 ~~l~~~~-------------------------~~~l~~l~~L~~L~l~~~~~~~~~~~~~l~~~~~L~~L~l~~~-i~~~ 286 (336)
T 2ast_B 233 VMLKNDC-------------------------FQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGI-VPDG 286 (336)
T ss_dssp TTCCGGG-------------------------GGGGGGCTTCCEEECTTCTTCCGGGGGGGGGCTTCCEEECTTS-SCTT
T ss_pred CcCCHHH-------------------------HHHHhCCCCCCEeeCCCCCCCCHHHHHHHhcCCCCCEEeccCc-cCHH
Confidence 6 44333 3334445555555555553 22111123455556666666555 2211
Q ss_pred CCcccccccCCCC-CCCCEEEccCCCCcccCCchhh
Q 039514 322 TSKLSFLSSLANC-KKLRSLKLAGNPLDGFLPSSIG 356 (790)
Q Consensus 322 ~~~~~~~~~l~~l-~~L~~L~Ls~n~l~~~~p~~~~ 356 (790)
.+..+ ..++.|++++|.+++..|..+.
T Consensus 287 --------~~~~l~~~l~~L~l~~n~l~~~~~~~~~ 314 (336)
T 2ast_B 287 --------TLQLLKEALPHLQINCSHFTTIARPTIG 314 (336)
T ss_dssp --------CHHHHHHHSTTSEESCCCSCCTTCSSCS
T ss_pred --------HHHHHHhhCcceEEecccCccccCCccc
Confidence 01111 1244455666666665555443
No 90
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.86 E-value=5.7e-23 Score=222.36 Aligned_cols=242 Identities=21% Similarity=0.257 Sum_probs=148.1
Q ss_pred cCCCCCCCCEEEccCCCCcccCCch----hhhhcccCcEEEeecCc---CcccCchhh-------hccCCcceeeecccc
Q 039514 330 SLANCKKLRSLKLAGNPLDGFLPSS----IGNLSKSLETLVIANCS---ISGNIPQAI-------SNLSNLLTLVLERNK 395 (790)
Q Consensus 330 ~l~~l~~L~~L~Ls~n~l~~~~p~~----~~~l~~~L~~L~l~~n~---l~~~~p~~~-------~~l~~L~~L~L~~N~ 395 (790)
.+..+++|++|+|++|.+....+.. +..+ ++|++|++++|. +.+.+|..+ ..+++|++|+|++|.
T Consensus 27 ~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~-~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls~n~ 105 (386)
T 2ca6_A 27 VLLEDDSVKEIVLSGNTIGTEAARWLSENIASK-KDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNA 105 (386)
T ss_dssp HHHHCSCCCEEECTTSEECHHHHHHHHHTTTTC-TTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCSCC
T ss_pred HHhcCCCccEEECCCCCCCHHHHHHHHHHHHhC-CCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECCCCc
Confidence 3445566666666666665443222 2222 456666666542 333334333 345555555555555
Q ss_pred ccC----ccccccccccccCeEEeeccccCccCCccccccccccceecccCcccccCCccccCC---------CCCCeee
Q 039514 396 LTG----PISITFGRLQKLQGLYLASNNLVGSFPDELCHIGRLAELALLDNRHSGSIPSCVSNL---------TSLRYLY 462 (790)
Q Consensus 396 l~~----~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l---------~~L~~L~ 462 (790)
+.. ..+..+..+++|++|+|++|.+....+..+ +..+..+ ++|++|+
T Consensus 106 l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l--------------------~~~l~~l~~~~~~~~~~~L~~L~ 165 (386)
T 2ca6_A 106 FGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKI--------------------ARALQELAVNKKAKNAPPLRSII 165 (386)
T ss_dssp CCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHH--------------------HHHHHHHHHHHHHHTCCCCCEEE
T ss_pred CCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHH--------------------HHHHHHHhhhhhcccCCCCcEEE
Confidence 554 233344445555555555555432222111 1122222 6777777
Q ss_pred ccCCccc-cccC---cccccCCCCceEeccCCcccc-----cccccccccccCceEeCcCCccc----ccCcccccCCcc
Q 039514 463 LGSNRFT-FVIP---STFWSLKDILFFDFSSNFLVG-----TLSFDIGNLKVLLGINLSENNLS----GDMPATIGGLKD 529 (790)
Q Consensus 463 L~~N~l~-~~~~---~~~~~l~~L~~L~ls~N~l~~-----~~~~~~~~l~~L~~L~Ls~N~l~----~~~~~~~~~l~~ 529 (790)
+++|+++ ...+ ..+..+++|+.|++++|.++. ..+..+..+++|+.|+|++|.++ ..+|..+..+++
T Consensus 166 L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~ 245 (386)
T 2ca6_A 166 CGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPN 245 (386)
T ss_dssp CCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTT
T ss_pred CCCCCCCcHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCC
Confidence 7777776 2333 355566777777777777762 23336677888888888888885 566777888888
Q ss_pred cCeeeCCCCccccc----CCccc--cCCCCCCEEECCCCcCcc----cCCccc-cccCCCCeEeCCCCcceecC
Q 039514 530 LQFMDLAYNRLEGP----IPESF--GDLTSLEVLNLSKNKISG----SIPKSM-EKLFYLRELNLSFNELEGEI 592 (790)
Q Consensus 530 L~~L~Ls~N~l~~~----~p~~~--~~l~~L~~L~L~~N~l~~----~~p~~~-~~l~~L~~L~Ls~N~l~~~~ 592 (790)
|++|+|++|.+++. +|..+ +.+++|+.|+|++|.+++ .+|..+ .++++|++|++++|++++..
T Consensus 246 L~~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~~~ 319 (386)
T 2ca6_A 246 LRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEED 319 (386)
T ss_dssp CCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCTTS
T ss_pred cCEEECCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCCcch
Confidence 88888888888765 45555 337888888888888887 467666 55788888888888886543
No 91
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.86 E-value=2.6e-21 Score=201.77 Aligned_cols=191 Identities=23% Similarity=0.316 Sum_probs=126.6
Q ss_pred ccCcEEEeecCcCcccCchhhhccCCcceeeeccccccCccccccccccccCeEEeeccccCccCCccccccccccceec
Q 039514 360 KSLETLVIANCSISGNIPQAISNLSNLLTLVLERNKLTGPISITFGRLQKLQGLYLASNNLVGSFPDELCHIGRLAELAL 439 (790)
Q Consensus 360 ~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l 439 (790)
++|++|++++|.+.. +| .+..+++|++|++++|.+++..+ +..+++|++|++++|.+.+.
T Consensus 41 ~~L~~L~l~~~~i~~-l~-~~~~l~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~~n~l~~~---------------- 100 (308)
T 1h6u_A 41 DGITTLSAFGTGVTT-IE-GVQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLKNV---------------- 100 (308)
T ss_dssp HTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCSCC----------------
T ss_pred CCcCEEEeeCCCccC-ch-hhhccCCCCEEEccCCcCCCChh--HccCCCCCEEEccCCcCCCc----------------
Confidence 456666666666653 23 45666666666666666665444 55666666666666665432
Q ss_pred ccCcccccCCccccCCCCCCeeeccCCccccccCcccccCCCCceEeccCCcccccccccccccccCceEeCcCCccccc
Q 039514 440 LDNRHSGSIPSCVSNLTSLRYLYLGSNRFTFVIPSTFWSLKDILFFDFSSNFLVGTLSFDIGNLKVLLGINLSENNLSGD 519 (790)
Q Consensus 440 ~~n~~~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 519 (790)
..+..+++|++|++++|++++..+ +..+++|+.|++++|.+++..+ +..+++|+.|++++|++++.
T Consensus 101 ----------~~~~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~ 166 (308)
T 1h6u_A 101 ----------SAIAGLQSIKTLDLTSTQITDVTP--LAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSIGNAQVSDL 166 (308)
T ss_dssp ----------GGGTTCTTCCEEECTTSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCC
T ss_pred ----------hhhcCCCCCCEEECCCCCCCCchh--hcCCCCCCEEECCCCccCcCcc--ccCCCCccEEEccCCcCCCC
Confidence 134455566666666666654322 5566666666666666665444 66777777778888877754
Q ss_pred CcccccCCcccCeeeCCCCcccccCCccccCCCCCCEEECCCCcCcccCCccccccCCCCeEeCCCCccee
Q 039514 520 MPATIGGLKDLQFMDLAYNRLEGPIPESFGDLTSLEVLNLSKNKISGSIPKSMEKLFYLRELNLSFNELEG 590 (790)
Q Consensus 520 ~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 590 (790)
.+ +..+++|+.|++++|++++..+ +..+++|++|++++|++++.. .+..+++|+.|++++|++++
T Consensus 167 ~~--l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~L~~N~l~~~~--~l~~l~~L~~L~l~~N~i~~ 231 (308)
T 1h6u_A 167 TP--LANLSKLTTLKADDNKISDISP--LASLPNLIEVHLKNNQISDVS--PLANTSNLFIVTLTNQTITN 231 (308)
T ss_dssp GG--GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECTTSCCCBCG--GGTTCTTCCEEEEEEEEEEC
T ss_pred hh--hcCCCCCCEEECCCCccCcChh--hcCCCCCCEEEccCCccCccc--cccCCCCCCEEEccCCeeec
Confidence 44 7778888888888888876544 777888888888888887554 37778888888888888864
No 92
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.85 E-value=3e-21 Score=205.44 Aligned_cols=237 Identities=16% Similarity=0.126 Sum_probs=135.6
Q ss_pred ECCCCCcceeccccCCCCCCCCEEECCCCCCcccCChhhhCCCCCCEEeCCCCCCcccC-CccccCCCCCcE-EEccCcc
Q 039514 59 DTSQFNLQGTIPSQLGNLSSLTILNLSHNKLSGSVPSSIYTMHTLKFLDFTDNQLSGSV-SSFVFNMSSIVD-IRLTNNR 136 (790)
Q Consensus 59 dl~~~~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~-~~~~~~l~~L~~-L~L~~N~ 136 (790)
+.++++++ .+|..+. +++++|+|++|+|+.+.+.+|.++++|++|+|++|++.+.+ +..|.+++++++ +.+..|+
T Consensus 15 ~C~~~~Lt-~iP~~l~--~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~~N~ 91 (350)
T 4ay9_X 15 LCQESKVT-EIPSDLP--RNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANN 91 (350)
T ss_dssp EEESTTCC-SCCTTCC--TTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEEETT
T ss_pred EecCCCCC-ccCcCcC--CCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcccCCc
Confidence 33445555 4677663 57889999999998777778888888888888888875433 345666666554 3444566
Q ss_pred CcccCchhhhccCCCCCEEECCCCcCcccCCcCCCCCCCCCeeeccc-CcccccCcccccccCCCCceecccccccceEE
Q 039514 137 LSGELPKNICNYLPHLKALFLDKNMFHGKIPSALSKCKQLQQLNLQL-NNLSGAIPKEIGNLTMLKGISLLYNKLQEALV 215 (790)
Q Consensus 137 l~~~lp~~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~-N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~l~ 215 (790)
++ .+|.+.|..+++|++|++++|.+....+..+....++..|++.+ +++....+..|..+.
T Consensus 92 l~-~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~----------------- 153 (350)
T 4ay9_X 92 LL-YINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLS----------------- 153 (350)
T ss_dssp CC-EECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSB-----------------
T ss_pred cc-ccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccccccccccccchhhcc-----------------
Confidence 65 55555555566666666666666555555555555555555543 334433333333322
Q ss_pred cccccCccccCccccCCCCCcEEEcccCCCcccCCcchhcCCCCcceEeecC-CcccccCCccccCCCCCCEEeccCCcc
Q 039514 216 LGMNNLVGVLPATIFNMSTLKVLILINNSLSGSLPSRIDLSLPTVEVLILAL-NRFFGTIPSSITNASKLTVLELGGNTF 294 (790)
Q Consensus 216 l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~~l~~L~~L~L~~-n~~~~~~p~~~~~l~~L~~L~l~~n~l 294 (790)
..++.|++++|.++ .+|...+ ...+++.+++.. |.+....+..|..+++|++|++++|++
T Consensus 154 -----------------~~l~~L~L~~N~i~-~i~~~~f-~~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l 214 (350)
T 4ay9_X 154 -----------------FESVILWLNKNGIQ-EIHNSAF-NGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRI 214 (350)
T ss_dssp -----------------SSCEEEECCSSCCC-EECTTSS-TTEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCC
T ss_pred -----------------hhhhhhcccccccc-CCChhhc-cccchhHHhhccCCcccCCCHHHhccCcccchhhcCCCCc
Confidence 23455555555554 3333333 234455555543 233323334566777777777777777
Q ss_pred cccCcccccCCCCCccccccCCcccCCCCcccccccCCCCCCCCEEEccC
Q 039514 295 SGLIPDTIGNLRNLEWLNLSKNSLTSSTSKLSFLSSLANCKKLRSLKLAG 344 (790)
Q Consensus 295 ~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~l~~l~~L~~L~Ls~ 344 (790)
+.+.+..|.++++|+.+++. .++.+| .+..+++|+.+++++
T Consensus 215 ~~lp~~~~~~L~~L~~l~~~--~l~~lP-------~l~~l~~L~~l~l~~ 255 (350)
T 4ay9_X 215 HSLPSYGLENLKKLRARSTY--NLKKLP-------TLEKLVALMEASLTY 255 (350)
T ss_dssp CCCCSSSCTTCCEEECTTCT--TCCCCC-------CTTTCCSCCEEECSC
T ss_pred CccChhhhccchHhhhccCC--CcCcCC-------CchhCcChhhCcCCC
Confidence 76666556665555555442 233322 244555566665543
No 93
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.85 E-value=5.2e-23 Score=222.70 Aligned_cols=261 Identities=16% Similarity=0.184 Sum_probs=179.2
Q ss_pred CCEEeccCCcccccCcccccCCCCCccccccCCcccCCCCcccccccCCCCCCCCEEEccCCC---CcccCCchh-----
Q 039514 284 LTVLELGGNTFSGLIPDTIGNLRNLEWLNLSKNSLTSSTSKLSFLSSLANCKKLRSLKLAGNP---LDGFLPSSI----- 355 (790)
Q Consensus 284 L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~l~~l~~L~~L~Ls~n~---l~~~~p~~~----- 355 (790)
|+...++...+. .++..+..+++|++|+|++|.+...... .+...+..+++|++|+|++|. +.+.+|..+
T Consensus 11 L~~~~l~~~~~~-~l~~~l~~~~~L~~L~L~~n~i~~~~~~-~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~ 88 (386)
T 2ca6_A 11 LKLDAITTEDEK-SVFAVLLEDDSVKEIVLSGNTIGTEAAR-WLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQ 88 (386)
T ss_dssp CEESSCCSHHHH-TTSHHHHHCSCCCEEECTTSEECHHHHH-HHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHH
T ss_pred cccCCCCHHHHH-HHHHHHhcCCCccEEECCCCCCCHHHHH-HHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHH
Confidence 334444444444 3456788899999999999998764211 112347789999999999964 455556555
Q ss_pred --hhhcccCcEEEeecCcCcc----cCchhhhccCCcceeeeccccccCcccccccc----c---------cccCeEEee
Q 039514 356 --GNLSKSLETLVIANCSISG----NIPQAISNLSNLLTLVLERNKLTGPISITFGR----L---------QKLQGLYLA 416 (790)
Q Consensus 356 --~~l~~~L~~L~l~~n~l~~----~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~----l---------~~L~~L~L~ 416 (790)
..+ ++|++|++++|.+.. .+|..+..+++|++|+|++|.++...+..+.. + ++|++|+++
T Consensus 89 ~l~~~-~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~ 167 (386)
T 2ca6_A 89 ALLKC-PKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICG 167 (386)
T ss_dssp HHTTC-TTCCEEECCSCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECC
T ss_pred HHhhC-CcccEEECCCCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECC
Confidence 333 689999999999997 47888999999999999999997544433332 3 677777777
Q ss_pred ccccCc-cCCccccccccccceecccCcccccCCccccCCCCCCeeeccCCcccc-----ccCcccccCCCCceEeccCC
Q 039514 417 SNNLVG-SFPDELCHIGRLAELALLDNRHSGSIPSCVSNLTSLRYLYLGSNRFTF-----VIPSTFWSLKDILFFDFSSN 490 (790)
Q Consensus 417 ~n~l~~-~~~~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~L~~N~l~~-----~~~~~~~~l~~L~~L~ls~N 490 (790)
+|++.. .++. +...+..+++|++|++++|+++. ..|..+..+++|+.|++++|
T Consensus 168 ~n~l~~~~~~~---------------------l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n 226 (386)
T 2ca6_A 168 RNRLENGSMKE---------------------WAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDN 226 (386)
T ss_dssp SSCCTGGGHHH---------------------HHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSS
T ss_pred CCCCCcHHHHH---------------------HHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCC
Confidence 777652 2221 11234445566666666666552 23335556666666666666
Q ss_pred ccc----ccccccccccccCceEeCcCCccccc----Ccccc--cCCcccCeeeCCCCcccc----cCCccc-cCCCCCC
Q 039514 491 FLV----GTLSFDIGNLKVLLGINLSENNLSGD----MPATI--GGLKDLQFMDLAYNRLEG----PIPESF-GDLTSLE 555 (790)
Q Consensus 491 ~l~----~~~~~~~~~l~~L~~L~Ls~N~l~~~----~~~~~--~~l~~L~~L~Ls~N~l~~----~~p~~~-~~l~~L~ 555 (790)
.++ ..++..+..+++|++|+|++|.+++. ++..+ +.+++|+.|+|++|.+++ .+|..+ .++++|+
T Consensus 227 ~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~ 306 (386)
T 2ca6_A 227 TFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLL 306 (386)
T ss_dssp CCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCC
T ss_pred CCCcHHHHHHHHHHccCCCcCEEECCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCce
Confidence 664 44555667777788888888887755 45555 347888888888888887 366666 6678899
Q ss_pred EEECCCCcCcccC
Q 039514 556 VLNLSKNKISGSI 568 (790)
Q Consensus 556 ~L~L~~N~l~~~~ 568 (790)
+|++++|.+++..
T Consensus 307 ~L~l~~N~l~~~~ 319 (386)
T 2ca6_A 307 FLELNGNRFSEED 319 (386)
T ss_dssp EEECTTSBSCTTS
T ss_pred EEEccCCcCCcch
Confidence 9999999888655
No 94
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.85 E-value=9.2e-22 Score=209.48 Aligned_cols=236 Identities=15% Similarity=0.086 Sum_probs=180.7
Q ss_pred CCccccccCCCC---------CcEEEEECCCCCcceeccccCCCCCCCCEEECCCCCCccc-CChhhhCCCCCCE-EeCC
Q 039514 41 CTWIGITCDVNS---------HRVTALDTSQFNLQGTIPSQLGNLSSLTILNLSHNKLSGS-VPSSIYTMHTLKF-LDFT 109 (790)
Q Consensus 41 c~w~gv~c~~~~---------~~v~~Ldl~~~~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~-~~~~~~~l~~L~~-L~Ls 109 (790)
|+|..|.|+... ..++.|+|++|.|+...+.+|..+++|++|+|++|++.+. .+.+|.+++++++ +.++
T Consensus 9 C~~~~v~C~~~~Lt~iP~~l~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~ 88 (350)
T 4ay9_X 9 CSNRVFLCQESKVTEIPSDLPRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEK 88 (350)
T ss_dssp EETTEEEEESTTCCSCCTTCCTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEE
T ss_pred eeCCEEEecCCCCCccCcCcCCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhccc
Confidence 688888897531 3578999999999977777899999999999999998664 4568999998775 6777
Q ss_pred CCCCcccCCccccCCCCCcEEEccCccCcccCchhhhccCCCCCEEECCC-CcCcccCCcCCCCCC-CCCeeecccCccc
Q 039514 110 DNQLSGSVSSFVFNMSSIVDIRLTNNRLSGELPKNICNYLPHLKALFLDK-NMFHGKIPSALSKCK-QLQQLNLQLNNLS 187 (790)
Q Consensus 110 ~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~lp~~~~~~l~~L~~L~L~~-N~i~~~~p~~~~~l~-~L~~L~L~~N~l~ 187 (790)
.|+++.+.|..|.++++|++|++++|+++ .+|...+....++..|++.+ |.+....+.+|..+. .+++|+|++|+|+
T Consensus 89 ~N~l~~l~~~~f~~l~~L~~L~l~~n~l~-~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i~ 167 (350)
T 4ay9_X 89 ANNLLYINPEAFQNLPNLQYLLISNTGIK-HLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQ 167 (350)
T ss_dssp ETTCCEECTTSBCCCTTCCEEEEEEECCS-SCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCC
T ss_pred CCcccccCchhhhhccccccccccccccc-cCCchhhcccchhhhhhhccccccccccccchhhcchhhhhhcccccccc
Confidence 89999999999999999999999999998 67776666677888999865 678878888888876 6999999999999
Q ss_pred ccCcccccccCCCCceecccccccceEEcccccCccccCccccCCCCCcEEEcccCCCcccCCcchhcCCCCcceEeecC
Q 039514 188 GAIPKEIGNLTMLKGISLLYNKLQEALVLGMNNLVGVLPATIFNMSTLKVLILINNSLSGSLPSRIDLSLPTVEVLILAL 267 (790)
Q Consensus 188 ~~~~~~~~~l~~L~~L~l~~n~l~~~l~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~~l~~L~~L~L~~ 267 (790)
.+.+..| ...+|+.|+++. .|.+..+.++.|.++++|++|++++|.++ .+|...+ ..|+.|.+..
T Consensus 168 ~i~~~~f-~~~~L~~l~l~~----------~n~l~~i~~~~f~~l~~L~~LdLs~N~l~-~lp~~~~---~~L~~L~~l~ 232 (350)
T 4ay9_X 168 EIHNSAF-NGTQLDELNLSD----------NNNLEELPNDVFHGASGPVILDISRTRIH-SLPSYGL---ENLKKLRARS 232 (350)
T ss_dssp EECTTSS-TTEEEEEEECTT----------CTTCCCCCTTTTTTEECCSEEECTTSCCC-CCCSSSC---TTCCEEECTT
T ss_pred CCChhhc-cccchhHHhhcc----------CCcccCCCHHHhccCcccchhhcCCCCcC-ccChhhh---ccchHhhhcc
Confidence 6655555 455677755542 23344444567888999999999999998 6666543 4455555444
Q ss_pred CcccccCCccccCCCCCCEEeccCCc
Q 039514 268 NRFFGTIPSSITNASKLTVLELGGNT 293 (790)
Q Consensus 268 n~~~~~~p~~~~~l~~L~~L~l~~n~ 293 (790)
+.-...+|. +.++++|+.++++++.
T Consensus 233 ~~~l~~lP~-l~~l~~L~~l~l~~~~ 257 (350)
T 4ay9_X 233 TYNLKKLPT-LEKLVALMEASLTYPS 257 (350)
T ss_dssp CTTCCCCCC-TTTCCSCCEEECSCHH
T ss_pred CCCcCcCCC-chhCcChhhCcCCCCc
Confidence 443445553 6667777777776554
No 95
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.85 E-value=1.7e-21 Score=217.72 Aligned_cols=215 Identities=24% Similarity=0.359 Sum_probs=148.9
Q ss_pred ccCCCCCCCCCC-----Ccccc-ccCCCCCcEEEEECCCCCcceeccccCCCCCCCCEEECCCCCCcccCChhhhCCCCC
Q 039514 30 LAHNWTSNASVC-----TWIGI-TCDVNSHRVTALDTSQFNLQGTIPSQLGNLSSLTILNLSHNKLSGSVPSSIYTMHTL 103 (790)
Q Consensus 30 ~~~~w~~~~~~c-----~w~gv-~c~~~~~~v~~Ldl~~~~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L 103 (790)
+.. |..+.++| .|.|+ .|.. .+++.||++++++++ +|..+. ++|++|+|++|+|+. +| ..+++|
T Consensus 33 l~~-W~~~~~~~~~~~~~~~~l~~C~~--~~L~~L~Ls~n~L~~-lp~~l~--~~L~~L~Ls~N~l~~-ip---~~l~~L 102 (571)
T 3cvr_A 33 WDK-WEKQALPGENRNEAVSLLKECLI--NQFSELQLNRLNLSS-LPDNLP--PQITVLEITQNALIS-LP---ELPASL 102 (571)
T ss_dssp HHH-HHTTCCTTCCHHHHHHHHHHHHH--TTCSEEECCSSCCSC-CCSCCC--TTCSEEECCSSCCSC-CC---CCCTTC
T ss_pred HHH-HhccCCccccccchhhhcccccc--CCccEEEeCCCCCCc-cCHhHc--CCCCEEECcCCCCcc-cc---cccCCC
Confidence 444 87777788 79999 6875 478999999999987 777664 789999999999984 55 457899
Q ss_pred CEEeCCCCCCcccCCccccCCCCCcEEEccCccCcccCchhhhccCCCCCEEECCCCcCcccCCcCCCCCCCCCeeeccc
Q 039514 104 KFLDFTDNQLSGSVSSFVFNMSSIVDIRLTNNRLSGELPKNICNYLPHLKALFLDKNMFHGKIPSALSKCKQLQQLNLQL 183 (790)
Q Consensus 104 ~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~lp~~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~ 183 (790)
++|+|++|+|++ +|. +.+ +|++|+|++|.+++ +|. .+++|++|+|++|.+++ +|. .+++|++|+|++
T Consensus 103 ~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls~N~l~~-lp~----~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~ 169 (571)
T 3cvr_A 103 EYLDACDNRLST-LPE-LPA--SLKHLDVDNNQLTM-LPE----LPALLEYINADNNQLTM-LPE---LPTSLEVLSVRN 169 (571)
T ss_dssp CEEECCSSCCSC-CCC-CCT--TCCEEECCSSCCSC-CCC----CCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCS
T ss_pred CEEEccCCCCCC-cch-hhc--CCCEEECCCCcCCC-CCC----cCccccEEeCCCCccCc-CCC---cCCCcCEEECCC
Confidence 999999999987 555 655 89999999999884 776 47888888888888886 444 567888888888
Q ss_pred CcccccCcccccccCCCCceecccccccceEEcccccCccccCccccCCCCCcEEEcccCCCcccCCcchhcCCCCcceE
Q 039514 184 NNLSGAIPKEIGNLTMLKGISLLYNKLQEALVLGMNNLVGVLPATIFNMSTLKVLILINNSLSGSLPSRIDLSLPTVEVL 263 (790)
Q Consensus 184 N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~l~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~~l~~L~~L 263 (790)
|+|++ +|. |. ++|+.|++++|.+.. +|. +.. +| ....+.++.|
T Consensus 170 N~L~~-lp~-l~--~~L~~L~Ls~N~L~~------------lp~-~~~--~L------------------~~~~~~L~~L 212 (571)
T 3cvr_A 170 NQLTF-LPE-LP--ESLEALDVSTNLLES------------LPA-VPV--RN------------------HHSEETEIFF 212 (571)
T ss_dssp SCCSC-CCC-CC--TTCCEEECCSSCCSS------------CCC-CC----------------------------CCEEE
T ss_pred CCCCC-cch-hh--CCCCEEECcCCCCCc------------hhh-HHH--hh------------------hcccccceEE
Confidence 88875 444 44 566665555444432 232 221 22 0011122445
Q ss_pred eecCCcccccCCccccCCCCCCEEeccCCcccccCcccccCC
Q 039514 264 ILALNRFFGTIPSSITNASKLTVLELGGNTFSGLIPDTIGNL 305 (790)
Q Consensus 264 ~L~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l 305 (790)
+|++|.+. .+|..+..+++|+.|++++|.+++..|..|..+
T Consensus 213 ~Ls~N~l~-~lp~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l 253 (571)
T 3cvr_A 213 RCRENRIT-HIPENILSLDPTCTIILEDNPLSSRIRESLSQQ 253 (571)
T ss_dssp ECCSSCCC-CCCGGGGGSCTTEEEECCSSSCCHHHHHHHHHH
T ss_pred ecCCCcce-ecCHHHhcCCCCCEEEeeCCcCCCcCHHHHHHh
Confidence 55555444 345555567777777777777777766666554
No 96
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.85 E-value=2.7e-22 Score=212.84 Aligned_cols=253 Identities=14% Similarity=0.213 Sum_probs=126.7
Q ss_pred CCEEeccCCcccccCcccccCC--CCCccccccCCcccCCCCcccccccCCCCCCCCEEEccCCCCccc-CCchhhhhcc
Q 039514 284 LTVLELGGNTFSGLIPDTIGNL--RNLEWLNLSKNSLTSSTSKLSFLSSLANCKKLRSLKLAGNPLDGF-LPSSIGNLSK 360 (790)
Q Consensus 284 L~~L~l~~n~l~~~~~~~~~~l--~~L~~L~Ls~n~l~~~~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~-~p~~~~~l~~ 360 (790)
++.++++++.+. +..+..+ ++++.|++++|.+.+.... +..+++|++|++++|.+.+. ++..+..+ +
T Consensus 49 ~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~~------~~~~~~L~~L~L~~~~l~~~~~~~~~~~~-~ 118 (336)
T 2ast_B 49 WQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAE------HFSPFRVQHMDLSNSVIEVSTLHGILSQC-S 118 (336)
T ss_dssp SSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCCS------CCCCBCCCEEECTTCEECHHHHHHHHTTB-C
T ss_pred heeeccccccCC---HHHHHhhhhccceEEEcCCccccccchh------hccCCCCCEEEccCCCcCHHHHHHHHhhC-C
Confidence 556666666554 3444555 5666666666666554321 33455666666666655443 44444443 4
Q ss_pred cCcEEEeecCcCcccCchhhhccCCcceeeeccc-cccCc-cccccccccccCeEEeecc-ccCcc-CCccccccccccc
Q 039514 361 SLETLVIANCSISGNIPQAISNLSNLLTLVLERN-KLTGP-ISITFGRLQKLQGLYLASN-NLVGS-FPDELCHIGRLAE 436 (790)
Q Consensus 361 ~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N-~l~~~-~~~~~~~l~~L~~L~L~~n-~l~~~-~~~~~~~l~~L~~ 436 (790)
+|++|++++|.+++..+..+..+++|++|++++| .+++. .+..+..+++|++|++++| .+++. ++..+..++
T Consensus 119 ~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~---- 194 (336)
T 2ast_B 119 KLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVS---- 194 (336)
T ss_dssp CCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSC----
T ss_pred CCCEEeCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHHHhcc----
Confidence 5666666666665555555666666666666666 44432 2333445555666666555 54432 233333333
Q ss_pred eecccCcccccCCccccCCCCCCeeeccCC--ccc-cccCcccccCCCCceEeccCCc-ccccccccccccccCceEeCc
Q 039514 437 LALLDNRHSGSIPSCVSNLTSLRYLYLGSN--RFT-FVIPSTFWSLKDILFFDFSSNF-LVGTLSFDIGNLKVLLGINLS 512 (790)
Q Consensus 437 L~l~~n~~~~~~p~~~~~l~~L~~L~L~~N--~l~-~~~~~~~~~l~~L~~L~ls~N~-l~~~~~~~~~~l~~L~~L~Ls 512 (790)
.+|++|++++| .++ ..+|..+..+++|+.|++++|. +++..+..+..+++|++|+++
T Consensus 195 -------------------~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~~L~l~ 255 (336)
T 2ast_B 195 -------------------ETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLS 255 (336)
T ss_dssp -------------------TTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECT
T ss_pred -------------------cCCCEEEeCCCcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhCCCCCCEeeCC
Confidence 04444444444 222 2233333444444444444444 333444444555555555555
Q ss_pred CCc-ccccCcccccCCcccCeeeCCCCcccccCCccccCC-CCCCEEECCCCcCcccCCcccc
Q 039514 513 ENN-LSGDMPATIGGLKDLQFMDLAYNRLEGPIPESFGDL-TSLEVLNLSKNKISGSIPKSME 573 (790)
Q Consensus 513 ~N~-l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l-~~L~~L~L~~N~l~~~~p~~~~ 573 (790)
+|. +.......+..+++|+.|++++| ++ ...+..+ ..|+.|++++|.+++..|..+.
T Consensus 256 ~~~~~~~~~~~~l~~~~~L~~L~l~~~-i~---~~~~~~l~~~l~~L~l~~n~l~~~~~~~~~ 314 (336)
T 2ast_B 256 RCYDIIPETLLELGEIPTLKTLQVFGI-VP---DGTLQLLKEALPHLQINCSHFTTIARPTIG 314 (336)
T ss_dssp TCTTCCGGGGGGGGGCTTCCEEECTTS-SC---TTCHHHHHHHSTTSEESCCCSCCTTCSSCS
T ss_pred CCCCCCHHHHHHHhcCCCCCEEeccCc-cC---HHHHHHHHhhCcceEEecccCccccCCccc
Confidence 553 22111124555666666666666 22 1122222 2245555666666666665554
No 97
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.85 E-value=3.8e-21 Score=188.53 Aligned_cols=181 Identities=23% Similarity=0.293 Sum_probs=143.9
Q ss_pred CCCccccccCCCCCcEEEEECCCCCcceeccccCCCCCCCCEEECCCCCCcccCChhhhCCCCCCEEeCCCCCCcccCCc
Q 039514 40 VCTWIGITCDVNSHRVTALDTSQFNLQGTIPSQLGNLSSLTILNLSHNKLSGSVPSSIYTMHTLKFLDFTDNQLSGSVSS 119 (790)
Q Consensus 40 ~c~w~gv~c~~~~~~v~~Ldl~~~~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~ 119 (790)
.|.|.+|.|+.. .++ .+|..+ .++|++|++++|.+++..+..|..+++|++|++++|++++..+.
T Consensus 6 ~C~~~~v~c~~~------------~l~-~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~ 70 (208)
T 2o6s_A 6 SCSGTTVECYSQ------------GRT-SVPTGI--PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNG 70 (208)
T ss_dssp EEETTEEECCSS------------CCS-SCCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTT
T ss_pred EECCCEEEecCC------------Ccc-CCCCCC--CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChh
Confidence 378999988753 222 234444 34888999999999887777888899999999999999888777
Q ss_pred cccCCCCCcEEEccCccCcccCchhhhccCCCCCEEECCCCcCcccCCcCCCCCCCCCeeecccCcccccCcccccccCC
Q 039514 120 FVFNMSSIVDIRLTNNRLSGELPKNICNYLPHLKALFLDKNMFHGKIPSALSKCKQLQQLNLQLNNLSGAIPKEIGNLTM 199 (790)
Q Consensus 120 ~~~~l~~L~~L~L~~N~l~~~lp~~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~ 199 (790)
.|.++++|++|++++|+++ .+|...+..+++|++|+|++|.+++..+..|..+++|++|++++|++++..+..|..+++
T Consensus 71 ~~~~l~~L~~L~Ls~n~l~-~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~ 149 (208)
T 2o6s_A 71 VFNKLTSLTYLNLSTNQLQ-SLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTS 149 (208)
T ss_dssp TTTTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTT
T ss_pred hcCCCCCcCEEECCCCcCC-ccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCC
Confidence 8888999999999999988 677777788899999999999998877778888999999999999998777777888888
Q ss_pred CCceecccccccceEEcccccCccccCccccCCCCCcEEEcccCCCcccCCcchh
Q 039514 200 LKGISLLYNKLQEALVLGMNNLVGVLPATIFNMSTLKVLILINNSLSGSLPSRID 254 (790)
Q Consensus 200 L~~L~l~~n~l~~~l~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~ 254 (790)
|++|++++|.+. ..++.|+.|+++.|.++|.+|..+.
T Consensus 150 L~~L~l~~N~~~------------------~~~~~l~~L~~~~n~~~g~ip~~~~ 186 (208)
T 2o6s_A 150 LQYIWLHDNPWD------------------CTCPGIRYLSEWINKHSGVVRNSAG 186 (208)
T ss_dssp CCEEECCSCCBC------------------CCTTTTHHHHHHHHHCTTTBBCTTS
T ss_pred ccEEEecCCCee------------------cCCCCHHHHHHHHHhCCceeeccCc
Confidence 988777666542 2345678888888888887776554
No 98
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.84 E-value=1.1e-20 Score=196.93 Aligned_cols=211 Identities=21% Similarity=0.341 Sum_probs=144.9
Q ss_pred CccccccCCcccCCCCcccccccCCCCCCCCEEEccCCCCcccCCchhhhhcccCcEEEeecCcCcccCchhhhccCCcc
Q 039514 308 LEWLNLSKNSLTSSTSKLSFLSSLANCKKLRSLKLAGNPLDGFLPSSIGNLSKSLETLVIANCSISGNIPQAISNLSNLL 387 (790)
Q Consensus 308 L~~L~Ls~n~l~~~~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~~L~~L~l~~n~l~~~~p~~~~~l~~L~ 387 (790)
+..+.+..+.+.... ....+++|++|++++|.+.. +| .+..+ ++|++|++++|.+++..+ +..+++|+
T Consensus 21 ~~~~~l~~~~~~~~~-------~~~~l~~L~~L~l~~~~i~~-l~-~~~~l-~~L~~L~L~~n~i~~~~~--~~~l~~L~ 88 (308)
T 1h6u_A 21 AIKIAAGKSNVTDTV-------TQADLDGITTLSAFGTGVTT-IE-GVQYL-NNLIGLELKDNQITDLAP--LKNLTKIT 88 (308)
T ss_dssp HHHHHTTCSSTTSEE-------CHHHHHTCCEEECTTSCCCC-CT-TGGGC-TTCCEEECCSSCCCCCGG--GTTCCSCC
T ss_pred HHHHHhCCCCcCcee-------cHHHcCCcCEEEeeCCCccC-ch-hhhcc-CCCCEEEccCCcCCCChh--HccCCCCC
Confidence 344455555554421 24457889999999999985 34 46665 689999999999986554 99999999
Q ss_pred eeeeccccccCccccccccccccCeEEeeccccCccCCccccccccccceecccCcccccCCccccCCCCCCeeeccCCc
Q 039514 388 TLVLERNKLTGPISITFGRLQKLQGLYLASNNLVGSFPDELCHIGRLAELALLDNRHSGSIPSCVSNLTSLRYLYLGSNR 467 (790)
Q Consensus 388 ~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~L~~N~ 467 (790)
+|++++|.+++.. .+..+++|++|++++|.+.+. + .+..+++|+ +|++++|+
T Consensus 89 ~L~L~~n~l~~~~--~~~~l~~L~~L~l~~n~l~~~-~-~l~~l~~L~------------------------~L~l~~n~ 140 (308)
T 1h6u_A 89 ELELSGNPLKNVS--AIAGLQSIKTLDLTSTQITDV-T-PLAGLSNLQ------------------------VLYLDLNQ 140 (308)
T ss_dssp EEECCSCCCSCCG--GGTTCTTCCEEECTTSCCCCC-G-GGTTCTTCC------------------------EEECCSSC
T ss_pred EEEccCCcCCCch--hhcCCCCCCEEECCCCCCCCc-h-hhcCCCCCC------------------------EEECCCCc
Confidence 9999999998753 588899999999999988753 2 244444444 45555554
Q ss_pred cccccCcccccCCCCceEeccCCcccccccccccccccCceEeCcCCcccccCcccccCCcccCeeeCCCCcccccCCcc
Q 039514 468 FTFVIPSTFWSLKDILFFDFSSNFLVGTLSFDIGNLKVLLGINLSENNLSGDMPATIGGLKDLQFMDLAYNRLEGPIPES 547 (790)
Q Consensus 468 l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~ 547 (790)
+++..+ +..+++|+.|++++|.+++..+ +..+++|+.|++++|++++..+ +..+++|++|+|++|++++..|
T Consensus 141 l~~~~~--l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~L~~N~l~~~~~-- 212 (308)
T 1h6u_A 141 ITNISP--LAGLTNLQYLSIGNAQVSDLTP--LANLSKLTTLKADDNKISDISP--LASLPNLIEVHLKNNQISDVSP-- 212 (308)
T ss_dssp CCCCGG--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECTTSCCCBCGG--
T ss_pred cCcCcc--ccCCCCccEEEccCCcCCCChh--hcCCCCCCEEECCCCccCcChh--hcCCCCCCEEEccCCccCcccc--
Confidence 444332 4455555555555555554333 5566667777777777765443 6677777777777777775543
Q ss_pred ccCCCCCCEEECCCCcCcc
Q 039514 548 FGDLTSLEVLNLSKNKISG 566 (790)
Q Consensus 548 ~~~l~~L~~L~L~~N~l~~ 566 (790)
+..+++|+.|++++|++++
T Consensus 213 l~~l~~L~~L~l~~N~i~~ 231 (308)
T 1h6u_A 213 LANTSNLFIVTLTNQTITN 231 (308)
T ss_dssp GTTCTTCCEEEEEEEEEEC
T ss_pred ccCCCCCCEEEccCCeeec
Confidence 6777777777777777764
No 99
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.83 E-value=2.7e-20 Score=185.11 Aligned_cols=159 Identities=23% Similarity=0.352 Sum_probs=116.1
Q ss_pred CCCCCCCCCccccccCCCCCcEEEEECCCCCcceeccccCCCCCCCCEEECCCCCCcccCChhhhCCCCCCEEeCCCCCC
Q 039514 34 WTSNASVCTWIGITCDVNSHRVTALDTSQFNLQGTIPSQLGNLSSLTILNLSHNKLSGSVPSSIYTMHTLKFLDFTDNQL 113 (790)
Q Consensus 34 w~~~~~~c~w~gv~c~~~~~~v~~Ldl~~~~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~n~l 113 (790)
|..+...|+|.+|.|+.. .++ .+|..+. ++|++|+|++|.|+++.|..|..+++|++|+|++|+|
T Consensus 12 ~~~~~~~Cs~~~v~c~~~------------~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l 76 (229)
T 3e6j_A 12 ACPSQCSCSGTTVDCRSK------------RHA-SVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQL 76 (229)
T ss_dssp CCCTTCEEETTEEECTTS------------CCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCC
T ss_pred cCCCCCEEeCCEeEccCC------------CcC-ccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCC
Confidence 666778999999999753 222 4455554 6889999999999888888888888999999998888
Q ss_pred cccCCccccCCCCCcEEEccCccCcccCchhhhccCCCCCEEECCCCcCcccCCcCCCCCCCCCeeecccCcccccCccc
Q 039514 114 SGSVSSFVFNMSSIVDIRLTNNRLSGELPKNICNYLPHLKALFLDKNMFHGKIPSALSKCKQLQQLNLQLNNLSGAIPKE 193 (790)
Q Consensus 114 ~~~~~~~~~~l~~L~~L~L~~N~l~~~lp~~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~ 193 (790)
+...+..|.++++|++|+|++|+++ .+|...|..+++|++|+|++|.++ .+|..+..+++|++|+|++|+|+...+..
T Consensus 77 ~~i~~~~~~~l~~L~~L~Ls~N~l~-~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~ 154 (229)
T 3e6j_A 77 GALPVGVFDSLTQLTVLDLGTNQLT-VLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGA 154 (229)
T ss_dssp CCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTT
T ss_pred CCcChhhcccCCCcCEEECCCCcCC-ccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHHH
Confidence 8777777777777788887777777 666666667777777777777777 55666777777777777777776555555
Q ss_pred ccccCCCCceeccccc
Q 039514 194 IGNLTMLKGISLLYNK 209 (790)
Q Consensus 194 ~~~l~~L~~L~l~~n~ 209 (790)
|..+++|+.|++++|+
T Consensus 155 ~~~l~~L~~L~l~~N~ 170 (229)
T 3e6j_A 155 FDRLSSLTHAYLFGNP 170 (229)
T ss_dssp TTTCTTCCEEECTTSC
T ss_pred HhCCCCCCEEEeeCCC
Confidence 5555555554444443
No 100
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.81 E-value=1.9e-21 Score=225.89 Aligned_cols=233 Identities=19% Similarity=0.208 Sum_probs=84.8
Q ss_pred cCCCCHHHHHHHHHHHhhcCCCCCccccCCCCC-CCCCCCccccccCCCCCcEEEEECCCCCcceeccccCCCCCCCCEE
Q 039514 4 ASSNITTDQQALLALKDHIISDPTNLLAHNWTS-NASVCTWIGITCDVNSHRVTALDTSQFNLQGTIPSQLGNLSSLTIL 82 (790)
Q Consensus 4 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~w~~-~~~~c~w~gv~c~~~~~~v~~Ldl~~~~l~~~~~~~~~~l~~L~~L 82 (790)
+++..+.++++++++..+........-. +|.. ....++|.++.+.. .+++.|+|..+.+... +.. .|+.+
T Consensus 126 s~s~~~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~s~--~~~~~l~L~~n~~~~~-~~~-----~l~~l 196 (727)
T 4b8c_D 126 SKSLVDCTKQALMEMADTLTDSKTAKKQ-QPTGDSTPSGTATNSAVST--PLTPKIELFANGKDEA-NQA-----LLQHK 196 (727)
T ss_dssp ------CCCHHHHHHHHHHHHHHTTC------------------------------------------------------
T ss_pred hhhccccchhhhhhhhhhcccccCcccC-CCcCCCCccccCCCceecC--CccceEEeeCCCCCcc-hhh-----HhhcC
Confidence 3344567899999999887432222222 2633 34567999988765 6899999999988753 332 34556
Q ss_pred ECCCCCCcccCChhhhCCCCCCEEeCCCCCCcccCCccccCCCCCcEEEccCccCcccCchhhhccCCCCCEEECCCCcC
Q 039514 83 NLSHNKLSGSVPSSIYTMHTLKFLDFTDNQLSGSVSSFVFNMSSIVDIRLTNNRLSGELPKNICNYLPHLKALFLDKNMF 162 (790)
Q Consensus 83 ~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~lp~~~~~~l~~L~~L~L~~N~i 162 (790)
+|+.|.|.+ ++++.|++. ..+..|..+..|+.|+|++|.+. .+|..++ .+++|++|+|++|.|
T Consensus 197 ~Ls~~~i~~--------------~~~~~n~~~-~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~-~l~~L~~L~Ls~N~l 259 (727)
T 4b8c_D 197 KLSQYSIDE--------------DDDIENRMV-MPKDSKYDDQLWHALDLSNLQIF-NISANIF-KYDFLTRLYLNGNSL 259 (727)
T ss_dssp ----------------------------------------CCCCCCEEECTTSCCS-CCCGGGG-GCCSCSCCBCTTSCC
T ss_pred ccCcccccC--------------cccccccee-cChhhhccCCCCcEEECCCCCCC-CCChhhc-CCCCCCEEEeeCCcC
Confidence 666665543 233333333 34444445555555555555554 5555543 355555555555555
Q ss_pred cccCCcCCCCCCCCCeeecccCcccccCcccccccCCCCceecccccccceEEcccccCccccCccccCCCCCcEEEccc
Q 039514 163 HGKIPSALSKCKQLQQLNLQLNNLSGAIPKEIGNLTMLKGISLLYNKLQEALVLGMNNLVGVLPATIFNMSTLKVLILIN 242 (790)
Q Consensus 163 ~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~l~l~~n~l~~~~p~~~~~l~~L~~L~L~~ 242 (790)
+ .+|..|+++++|++|+|++|.|+ .+|..|++|++|++|+|++|.+. .+|..|.++++|+.|+|++
T Consensus 260 ~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~------------~lp~~~~~l~~L~~L~L~~ 325 (727)
T 4b8c_D 260 T-ELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQLKYFYFFDNMVT------------TLPWEFGNLCNLQFLGVEG 325 (727)
T ss_dssp S-CCCGGGGGGTTCCEEECTTSCCS-SCCSSGGGGTTCSEEECCSSCCC------------CCCSSTTSCTTCCCEECTT
T ss_pred c-ccChhhhCCCCCCEEeCcCCcCC-ccChhhcCCCCCCEEECCCCCCC------------ccChhhhcCCCccEEeCCC
Confidence 5 44555555555555555555555 34555555555555444444332 2455555666666666666
Q ss_pred CCCcccCCcchhcCCCCcceEeecCCcccccCCc
Q 039514 243 NSLSGSLPSRIDLSLPTVEVLILALNRFFGTIPS 276 (790)
Q Consensus 243 n~l~~~~p~~~~~~l~~L~~L~L~~n~~~~~~p~ 276 (790)
|.+++.+|..+.........++|++|.+.+.+|.
T Consensus 326 N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~ 359 (727)
T 4b8c_D 326 NPLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPH 359 (727)
T ss_dssp SCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
T ss_pred CccCCCChHHHhhcchhhhHHhhccCcccCcCcc
Confidence 6666555544431111122345555655555554
No 101
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.81 E-value=1.4e-19 Score=177.41 Aligned_cols=180 Identities=23% Similarity=0.316 Sum_probs=142.4
Q ss_pred CEEECCCCCCcccCChhhhCCCCCCEEeCCCCCCcccCCccccCCCCCcEEEccCccCcccCchhhhccCCCCCEEECCC
Q 039514 80 TILNLSHNKLSGSVPSSIYTMHTLKFLDFTDNQLSGSVSSFVFNMSSIVDIRLTNNRLSGELPKNICNYLPHLKALFLDK 159 (790)
Q Consensus 80 ~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~lp~~~~~~l~~L~~L~L~~ 159 (790)
+.++.+++.++.+ |..+ .++|++|++++|++++..+..|.++++|++|++++|+++ .+|...|..+++|++|+|++
T Consensus 10 ~~v~c~~~~l~~~-p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~~~~~~~~~l~~L~~L~Ls~ 85 (208)
T 2o6s_A 10 TTVECYSQGRTSV-PTGI--PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQ-SLPNGVFNKLTSLTYLNLST 85 (208)
T ss_dssp TEEECCSSCCSSC-CSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCC-CCCTTTTTTCTTCCEEECCS
T ss_pred CEEEecCCCccCC-CCCC--CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccC-ccChhhcCCCCCcCEEECCC
Confidence 5678888888754 3333 468999999999999888888999999999999999998 78887778899999999999
Q ss_pred CcCcccCCcCCCCCCCCCeeecccCcccccCcccccccCCCCceecccccccceEEcccccCccccCccccCCCCCcEEE
Q 039514 160 NMFHGKIPSALSKCKQLQQLNLQLNNLSGAIPKEIGNLTMLKGISLLYNKLQEALVLGMNNLVGVLPATIFNMSTLKVLI 239 (790)
Q Consensus 160 N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~l~l~~n~l~~~~p~~~~~l~~L~~L~ 239 (790)
|.+++..+..|.++++|++|++++|++++..+..|..+++|++|++++|.+ ++..+..+..+++|+.|+
T Consensus 86 n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l-----------~~~~~~~~~~l~~L~~L~ 154 (208)
T 2o6s_A 86 NQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQL-----------KSVPDGVFDRLTSLQYIW 154 (208)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCC-----------SCCCTTTTTTCTTCCEEE
T ss_pred CcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCcc-----------ceeCHHHhccCCCccEEE
Confidence 999988888899999999999999999987777788888888866555544 445556677888888888
Q ss_pred cccCCCcccCCcchhcCCCCcceEeecCCcccccCCccccCCC
Q 039514 240 LINNSLSGSLPSRIDLSLPTVEVLILALNRFFGTIPSSITNAS 282 (790)
Q Consensus 240 L~~n~l~~~~p~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~ 282 (790)
+++|.+.+ .++.++.|+++.|.+.|.+|..++.++
T Consensus 155 l~~N~~~~--------~~~~l~~L~~~~n~~~g~ip~~~~~l~ 189 (208)
T 2o6s_A 155 LHDNPWDC--------TCPGIRYLSEWINKHSGVVRNSAGSVA 189 (208)
T ss_dssp CCSCCBCC--------CTTTTHHHHHHHHHCTTTBBCTTSSBC
T ss_pred ecCCCeec--------CCCCHHHHHHHHHhCCceeeccCcccc
Confidence 88887653 234566666666666666666555443
No 102
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.81 E-value=1.7e-19 Score=178.00 Aligned_cols=150 Identities=23% Similarity=0.325 Sum_probs=131.1
Q ss_pred EECCCCCcceeccccCCCCCCCCEEECCCCCCcccCChhhhCCCCCCEEeCCCCCCcccCCccccCCCCCcEEEccCccC
Q 039514 58 LDTSQFNLQGTIPSQLGNLSSLTILNLSHNKLSGSVPSSIYTMHTLKFLDFTDNQLSGSVSSFVFNMSSIVDIRLTNNRL 137 (790)
Q Consensus 58 Ldl~~~~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l 137 (790)
+++++++++ .+|..+. ++|++|+|++|.|+++.+..|..+++|++|+|++|+|++..|..|.++++|++|+|++|++
T Consensus 16 v~c~~~~l~-~iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l 92 (220)
T 2v9t_B 16 VDCRGKGLT-EIPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKI 92 (220)
T ss_dssp EECTTSCCS-SCCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSCC
T ss_pred EEcCCCCcC-cCCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCcC
Confidence 455556665 3566665 6899999999999998888999999999999999999999999999999999999999999
Q ss_pred cccCchhhhccCCCCCEEECCCCcCcccCCcCCCCCCCCCeeecccCcccccCcccccccCCCCceeccccccc
Q 039514 138 SGELPKNICNYLPHLKALFLDKNMFHGKIPSALSKCKQLQQLNLQLNNLSGAIPKEIGNLTMLKGISLLYNKLQ 211 (790)
Q Consensus 138 ~~~lp~~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~ 211 (790)
+ .+|..+|..+++|++|+|++|.+++..|..|..+++|++|+|++|+|++..+..|..+++|+.|++++|++.
T Consensus 93 ~-~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~ 165 (220)
T 2v9t_B 93 T-ELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFI 165 (220)
T ss_dssp C-CCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEE
T ss_pred C-ccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcC
Confidence 9 899988889999999999999999999999999999999999999998877777887777777776666553
No 103
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.81 E-value=5.7e-20 Score=181.37 Aligned_cols=157 Identities=24% Similarity=0.265 Sum_probs=129.5
Q ss_pred ceecccCcccccCCccccCCCCCCeeeccCCccccccC-cccccCCCCceEeccCCcccccccccccccccCceEeCcCC
Q 039514 436 ELALLDNRHSGSIPSCVSNLTSLRYLYLGSNRFTFVIP-STFWSLKDILFFDFSSNFLVGTLSFDIGNLKVLLGINLSEN 514 (790)
Q Consensus 436 ~L~l~~n~~~~~~p~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N 514 (790)
.+++++|.+.. +|..+. ..+++|+|++|++++..+ ..|..+++|+.|++++|.+++..+..|..+++|++|+|++|
T Consensus 15 ~l~~s~n~l~~-iP~~~~--~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N 91 (220)
T 2v70_A 15 TVDCSNQKLNK-IPEHIP--QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSN 91 (220)
T ss_dssp EEECCSSCCSS-CCSCCC--TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred EeEeCCCCccc-CccCCC--CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCCC
Confidence 44444444432 343332 345778888888877744 45778888888888888888887778889999999999999
Q ss_pred cccccCcccccCCcccCeeeCCCCcccccCCccccCCCCCCEEECCCCcCcccCCccccccCCCCeEeCCCCcceecCCC
Q 039514 515 NLSGDMPATIGGLKDLQFMDLAYNRLEGPIPESFGDLTSLEVLNLSKNKISGSIPKSMEKLFYLRELNLSFNELEGEIPS 594 (790)
Q Consensus 515 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~ 594 (790)
++++..+..|.++++|++|+|++|++++..|..|.++++|++|+|++|++++..|..|..+++|++|++++|++.+.++.
T Consensus 92 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~l 171 (220)
T 2v70_A 92 RLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNCYL 171 (220)
T ss_dssp CCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECSGGG
T ss_pred ccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCCCch
Confidence 99988888899999999999999999998899999999999999999999988899999999999999999999987664
Q ss_pred C
Q 039514 595 G 595 (790)
Q Consensus 595 ~ 595 (790)
.
T Consensus 172 ~ 172 (220)
T 2v70_A 172 A 172 (220)
T ss_dssp H
T ss_pred H
Confidence 3
No 104
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.80 E-value=9.3e-20 Score=179.84 Aligned_cols=155 Identities=20% Similarity=0.258 Sum_probs=129.0
Q ss_pred ceecccCcccccCCccccCCCCCCeeeccCCccccccCcccccCCCCceEeccCCcccccccccccccccCceEeCcCCc
Q 039514 436 ELALLDNRHSGSIPSCVSNLTSLRYLYLGSNRFTFVIPSTFWSLKDILFFDFSSNFLVGTLSFDIGNLKVLLGINLSENN 515 (790)
Q Consensus 436 ~L~l~~n~~~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~ 515 (790)
.++++++.+. .+|..+. ++|+.|++++|+++++.+..|..+++|+.|++++|.+++..+..|.++++|++|+|++|+
T Consensus 15 ~v~c~~~~l~-~iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~ 91 (220)
T 2v9t_B 15 IVDCRGKGLT-EIPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNK 91 (220)
T ss_dssp EEECTTSCCS-SCCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSC
T ss_pred EEEcCCCCcC-cCCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCc
Confidence 3444444444 2344332 578888888888887777788888888888888888888888888889999999999999
Q ss_pred ccccCcccccCCcccCeeeCCCCcccccCCccccCCCCCCEEECCCCcCcccCCccccccCCCCeEeCCCCcceecCC
Q 039514 516 LSGDMPATIGGLKDLQFMDLAYNRLEGPIPESFGDLTSLEVLNLSKNKISGSIPKSMEKLFYLRELNLSFNELEGEIP 593 (790)
Q Consensus 516 l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 593 (790)
|+.+.+..|.++++|++|+|++|++++..|..|..+++|++|+|++|++++..+..|..+++|+.|++++|++.+...
T Consensus 92 l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c~ 169 (220)
T 2v9t_B 92 ITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFICDCH 169 (220)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEECSGG
T ss_pred CCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcCCCCc
Confidence 998777788999999999999999999889999999999999999999998888889999999999999999987544
No 105
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.79 E-value=6.6e-19 Score=173.71 Aligned_cols=150 Identities=22% Similarity=0.303 Sum_probs=126.4
Q ss_pred EEECCCCCcceeccccCCCCCCCCEEECCCCCCcccCC-hhhhCCCCCCEEeCCCCCCcccCCccccCCCCCcEEEccCc
Q 039514 57 ALDTSQFNLQGTIPSQLGNLSSLTILNLSHNKLSGSVP-SSIYTMHTLKFLDFTDNQLSGSVSSFVFNMSSIVDIRLTNN 135 (790)
Q Consensus 57 ~Ldl~~~~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~-~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N 135 (790)
.+|++++.++. +|..+.. .+++|+|++|.|++..+ ..|..+++|++|+|++|+|++..+..|.++++|++|+|++|
T Consensus 15 ~l~~s~n~l~~-iP~~~~~--~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N 91 (220)
T 2v70_A 15 TVDCSNQKLNK-IPEHIPQ--YTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSN 91 (220)
T ss_dssp EEECCSSCCSS-CCSCCCT--TCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred EeEeCCCCccc-CccCCCC--CCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCCC
Confidence 57788888874 6776653 67899999999998855 56899999999999999999988889999999999999999
Q ss_pred cCcccCchhhhccCCCCCEEECCCCcCcccCCcCCCCCCCCCeeecccCcccccCcccccccCCCCceecccccc
Q 039514 136 RLSGELPKNICNYLPHLKALFLDKNMFHGKIPSALSKCKQLQQLNLQLNNLSGAIPKEIGNLTMLKGISLLYNKL 210 (790)
Q Consensus 136 ~l~~~lp~~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~l 210 (790)
.++ .+|...|..+++|++|+|++|.+++..|..|.++++|++|+|++|++++..|..|..+++|+.|++++|.+
T Consensus 92 ~l~-~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l 165 (220)
T 2v70_A 92 RLE-NVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPF 165 (220)
T ss_dssp CCC-CCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCE
T ss_pred ccC-ccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCC
Confidence 998 67777778899999999999999988888999999999999999998877777777777777666555554
No 106
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.79 E-value=4.7e-19 Score=198.08 Aligned_cols=188 Identities=22% Similarity=0.300 Sum_probs=136.4
Q ss_pred cCcEEEeecCcCcccCchhhhccCCcceeeeccccccCccccccccccccCeEEeeccccCccCCccccccccccceecc
Q 039514 361 SLETLVIANCSISGNIPQAISNLSNLLTLVLERNKLTGPISITFGRLQKLQGLYLASNNLVGSFPDELCHIGRLAELALL 440 (790)
Q Consensus 361 ~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~ 440 (790)
+|+.|++++|.+++ +|..+ .++|++|+|++|.++.++ ..+++|+.|++++|.+++ +|. +.. +|+.|+++
T Consensus 60 ~L~~L~Ls~n~L~~-lp~~l--~~~L~~L~Ls~N~l~~ip----~~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls 128 (571)
T 3cvr_A 60 QFSELQLNRLNLSS-LPDNL--PPQITVLEITQNALISLP----ELPASLEYLDACDNRLST-LPE-LPA--SLKHLDVD 128 (571)
T ss_dssp TCSEEECCSSCCSC-CCSCC--CTTCSEEECCSSCCSCCC----CCCTTCCEEECCSSCCSC-CCC-CCT--TCCEEECC
T ss_pred CccEEEeCCCCCCc-cCHhH--cCCCCEEECcCCCCcccc----cccCCCCEEEccCCCCCC-cch-hhc--CCCEEECC
Confidence 68888888888886 55544 378888888888888543 346788888888888886 565 554 78888888
Q ss_pred cCcccccCCccccCCCCCCeeeccCCccccccCcccccCCCCceEeccCCcccccccccccccccCceEeCcCCcccccC
Q 039514 441 DNRHSGSIPSCVSNLTSLRYLYLGSNRFTFVIPSTFWSLKDILFFDFSSNFLVGTLSFDIGNLKVLLGINLSENNLSGDM 520 (790)
Q Consensus 441 ~n~~~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 520 (790)
+|++.+ +|. .+++|++|++++|+++++ |. .+++|+.|++++|.+++ +|. +. ++|+.|+|++|+|+ .+
T Consensus 129 ~N~l~~-lp~---~l~~L~~L~Ls~N~l~~l-p~---~l~~L~~L~Ls~N~L~~-lp~-l~--~~L~~L~Ls~N~L~-~l 195 (571)
T 3cvr_A 129 NNQLTM-LPE---LPALLEYINADNNQLTML-PE---LPTSLEVLSVRNNQLTF-LPE-LP--ESLEALDVSTNLLE-SL 195 (571)
T ss_dssp SSCCSC-CCC---CCTTCCEEECCSSCCSCC-CC---CCTTCCEEECCSSCCSC-CCC-CC--TTCCEEECCSSCCS-SC
T ss_pred CCcCCC-CCC---cCccccEEeCCCCccCcC-CC---cCCCcCEEECCCCCCCC-cch-hh--CCCCEEECcCCCCC-ch
Confidence 888876 555 577888888888888763 43 46778888888888876 333 44 77888888888887 44
Q ss_pred cccccCCccc-------CeeeCCCCcccccCCccccCCCCCCEEECCCCcCcccCCccccccC
Q 039514 521 PATIGGLKDL-------QFMDLAYNRLEGPIPESFGDLTSLEVLNLSKNKISGSIPKSMEKLF 576 (790)
Q Consensus 521 ~~~~~~l~~L-------~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~ 576 (790)
|. |.. +| +.|+|++|+|+ .+|..+..+++|+.|+|++|.+++.+|..+..+.
T Consensus 196 p~-~~~--~L~~~~~~L~~L~Ls~N~l~-~lp~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~ 254 (571)
T 3cvr_A 196 PA-VPV--RNHHSEETEIFFRCRENRIT-HIPENILSLDPTCTIILEDNPLSSRIRESLSQQT 254 (571)
T ss_dssp CC-CC----------CCEEEECCSSCCC-CCCGGGGGSCTTEEEECCSSSCCHHHHHHHHHHH
T ss_pred hh-HHH--hhhcccccceEEecCCCcce-ecCHHHhcCCCCCEEEeeCCcCCCcCHHHHHHhh
Confidence 44 544 66 78888888887 4566666678888888888888877777766543
No 107
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.78 E-value=6.6e-19 Score=188.12 Aligned_cols=159 Identities=26% Similarity=0.268 Sum_probs=119.4
Q ss_pred ccceecccCcccccCCcccc-CCCCCCeeeccCCccccccCcccccCCCCceEeccCCcccccccccccccccCceEeCc
Q 039514 434 LAELALLDNRHSGSIPSCVS-NLTSLRYLYLGSNRFTFVIPSTFWSLKDILFFDFSSNFLVGTLSFDIGNLKVLLGINLS 512 (790)
Q Consensus 434 L~~L~l~~n~~~~~~p~~~~-~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls 512 (790)
++.|++++|++.+..+..+. .+++|++|+|++|+|+++.+..|..+++|++|++++|++++..+..|..+++|+.|+|+
T Consensus 41 l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~ 120 (361)
T 2xot_A 41 TALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSNHLHTLDEFLFSDLQALEVLLLY 120 (361)
T ss_dssp CSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECC
T ss_pred CCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCCCcCCcCCHHHhCCCcCCCEEECC
Confidence 44455555555544455555 66777777777777777776777777777777777777777777777888888888888
Q ss_pred CCcccccCcccccCCcccCeeeCCCCcccccCCccc---cCCCCCCEEECCCCcCcccCCccccccCC--CCeEeCCCCc
Q 039514 513 ENNLSGDMPATIGGLKDLQFMDLAYNRLEGPIPESF---GDLTSLEVLNLSKNKISGSIPKSMEKLFY--LRELNLSFNE 587 (790)
Q Consensus 513 ~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~---~~l~~L~~L~L~~N~l~~~~p~~~~~l~~--L~~L~Ls~N~ 587 (790)
+|+|+++.|..|.++++|+.|+|++|+|++..+..| ..+++|+.|+|++|+|++..+..+..++. ++.|+|++|+
T Consensus 121 ~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~~~l~~l~l~~N~ 200 (361)
T 2xot_A 121 NNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLKKLPLTDLQKLPAWVKNGLYLHNNP 200 (361)
T ss_dssp SSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCSSCCCCCCHHHHHHSCHHHHTTEECCSSC
T ss_pred CCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCCCCCCccCHHHhhhccHhhcceEEecCCC
Confidence 888888888888888899999999998887666666 56889999999999998666667777776 4889999999
Q ss_pred ceecC
Q 039514 588 LEGEI 592 (790)
Q Consensus 588 l~~~~ 592 (790)
+.+..
T Consensus 201 ~~C~C 205 (361)
T 2xot_A 201 LECDC 205 (361)
T ss_dssp EECCH
T ss_pred ccCCc
Confidence 98654
No 108
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.77 E-value=6.9e-19 Score=181.71 Aligned_cols=172 Identities=24% Similarity=0.349 Sum_probs=114.4
Q ss_pred hccCCcceeeeccccccCccccccccccccCeEEeeccccCccCCccccccccccceecccCcccccCCccccCCCCCCe
Q 039514 381 SNLSNLLTLVLERNKLTGPISITFGRLQKLQGLYLASNNLVGSFPDELCHIGRLAELALLDNRHSGSIPSCVSNLTSLRY 460 (790)
Q Consensus 381 ~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~ 460 (790)
..+++|+.|++++|.+.... .+..+++|++|++++|.+.+ ..+ +..+++|++
T Consensus 43 ~~l~~L~~L~l~~~~i~~~~--~~~~l~~L~~L~L~~n~l~~------------------------~~~--l~~l~~L~~ 94 (291)
T 1h6t_A 43 NELNSIDQIIANNSDIKSVQ--GIQYLPNVTKLFLNGNKLTD------------------------IKP--LANLKNLGW 94 (291)
T ss_dssp HHHHTCCEEECTTSCCCCCT--TGGGCTTCCEEECCSSCCCC------------------------CGG--GTTCTTCCE
T ss_pred hhcCcccEEEccCCCcccCh--hHhcCCCCCEEEccCCccCC------------------------Ccc--cccCCCCCE
Confidence 34555666666665555432 24455555555555555543 222 455556666
Q ss_pred eeccCCccccccCcccccCCCCceEeccCCcccccccccccccccCceEeCcCCcccccCcccccCCcccCeeeCCCCcc
Q 039514 461 LYLGSNRFTFVIPSTFWSLKDILFFDFSSNFLVGTLSFDIGNLKVLLGINLSENNLSGDMPATIGGLKDLQFMDLAYNRL 540 (790)
Q Consensus 461 L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l 540 (790)
|++++|++++. ..+..+++|+.|++++|.+++. ..+..+++|+.|++++|++++. ..+..+++|+.|++++|++
T Consensus 95 L~l~~n~l~~~--~~l~~l~~L~~L~L~~n~i~~~--~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l 168 (291)
T 1h6t_A 95 LFLDENKVKDL--SSLKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQI 168 (291)
T ss_dssp EECCSSCCCCG--GGGTTCTTCCEEECTTSCCCCC--GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCC
T ss_pred EECCCCcCCCC--hhhccCCCCCEEECCCCcCCCC--hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCcc
Confidence 66666665542 2255666666666666666553 3466777788888888888755 5677888888888888888
Q ss_pred cccCCccccCCCCCCEEECCCCcCcccCCccccccCCCCeEeCCCCccee
Q 039514 541 EGPIPESFGDLTSLEVLNLSKNKISGSIPKSMEKLFYLRELNLSFNELEG 590 (790)
Q Consensus 541 ~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 590 (790)
++..| +..+++|+.|++++|.+++ +| .+..+++|+.|++++|+++.
T Consensus 169 ~~~~~--l~~l~~L~~L~L~~N~i~~-l~-~l~~l~~L~~L~l~~n~i~~ 214 (291)
T 1h6t_A 169 SDIVP--LAGLTKLQNLYLSKNHISD-LR-ALAGLKNLDVLELFSQECLN 214 (291)
T ss_dssp CCCGG--GTTCTTCCEEECCSSCCCB-CG-GGTTCTTCSEEEEEEEEEEC
T ss_pred ccchh--hcCCCccCEEECCCCcCCC-Ch-hhccCCCCCEEECcCCcccC
Confidence 86655 7888888888888888875 33 47888888888888888864
No 109
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.77 E-value=1e-18 Score=186.67 Aligned_cols=175 Identities=26% Similarity=0.260 Sum_probs=141.9
Q ss_pred EEECCCCCcceeccccCCCCCCCCEEECCCCCCcccCChhhh-CCCCCCEEeCCCCCCcccCCccccCCCCCcEEEccCc
Q 039514 57 ALDTSQFNLQGTIPSQLGNLSSLTILNLSHNKLSGSVPSSIY-TMHTLKFLDFTDNQLSGSVSSFVFNMSSIVDIRLTNN 135 (790)
Q Consensus 57 ~Ldl~~~~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~-~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N 135 (790)
.+++++++++. +|..+.. .++.|+|++|+|++..+..|. .+++|++|+|++|+|++..+..|.++++|++|+|++|
T Consensus 22 ~l~c~~~~l~~-iP~~~~~--~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N 98 (361)
T 2xot_A 22 ILSCSKQQLPN-VPQSLPS--YTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSN 98 (361)
T ss_dssp EEECCSSCCSS-CCSSCCT--TCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred EEEeCCCCcCc-cCccCCC--CCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCCC
Confidence 56788888874 6776653 689999999999998888888 9999999999999999999899999999999999999
Q ss_pred cCcccCchhhhccCCCCCEEECCCCcCcccCCcCCCCCCCCCeeecccCcccccCcccc---cccCCCCceecccccccc
Q 039514 136 RLSGELPKNICNYLPHLKALFLDKNMFHGKIPSALSKCKQLQQLNLQLNNLSGAIPKEI---GNLTMLKGISLLYNKLQE 212 (790)
Q Consensus 136 ~l~~~lp~~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~---~~l~~L~~L~l~~n~l~~ 212 (790)
+++ .+|...|..+++|++|+|++|.|++..|..|.++++|++|+|++|+|+...+..| ..+++|+.|++++|++.
T Consensus 99 ~l~-~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l~- 176 (361)
T 2xot_A 99 HLH-TLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLK- 176 (361)
T ss_dssp CCC-EECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCSSCCC-
T ss_pred cCC-cCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCCCCCC-
Confidence 998 7787778889999999999999999889999999999999999999987655555 45777777555555443
Q ss_pred eEEcccccCccccCccccCCCC--CcEEEcccCCCc
Q 039514 213 ALVLGMNNLVGVLPATIFNMST--LKVLILINNSLS 246 (790)
Q Consensus 213 ~l~l~~n~l~~~~p~~~~~l~~--L~~L~L~~n~l~ 246 (790)
++.+..+..++. ++.|+|++|.+.
T Consensus 177 ----------~l~~~~~~~l~~~~l~~l~l~~N~~~ 202 (361)
T 2xot_A 177 ----------KLPLTDLQKLPAWVKNGLYLHNNPLE 202 (361)
T ss_dssp ----------CCCHHHHHHSCHHHHTTEECCSSCEE
T ss_pred ----------ccCHHHhhhccHhhcceEEecCCCcc
Confidence 334445555555 366777777765
No 110
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.76 E-value=4.2e-18 Score=169.17 Aligned_cols=154 Identities=25% Similarity=0.278 Sum_probs=124.2
Q ss_pred ceecccCcccccCCccccCCCCCCeeeccCCccccccCcccccCCCCceEeccCCcccccccccccccccCceEeCcCCc
Q 039514 436 ELALLDNRHSGSIPSCVSNLTSLRYLYLGSNRFTFVIPSTFWSLKDILFFDFSSNFLVGTLSFDIGNLKVLLGINLSENN 515 (790)
Q Consensus 436 ~L~l~~n~~~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~ 515 (790)
.++.+++++. .+|..+. ++|++|+|++|++++..|..|..+++|+.|++++|.+....+..|..+++|+.|+|++|+
T Consensus 23 ~v~c~~~~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~ 99 (229)
T 3e6j_A 23 TVDCRSKRHA-SVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTNQ 99 (229)
T ss_dssp EEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EeEccCCCcC-ccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCCCc
Confidence 3444444443 3343332 678888888888888777888888888888888888877777777888889999999999
Q ss_pred ccccCcccccCCcccCeeeCCCCcccccCCccccCCCCCCEEECCCCcCcccCCccccccCCCCeEeCCCCcceecCC
Q 039514 516 LSGDMPATIGGLKDLQFMDLAYNRLEGPIPESFGDLTSLEVLNLSKNKISGSIPKSMEKLFYLRELNLSFNELEGEIP 593 (790)
Q Consensus 516 l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 593 (790)
|++..+..|..+++|++|+|++|+++ .+|..+..+++|++|+|++|++++..+..|..+++|+.|++++|++.+.++
T Consensus 100 l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 176 (229)
T 3e6j_A 100 LTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDCECR 176 (229)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBCTTBG
T ss_pred CCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCccCCcc
Confidence 98888888889999999999999998 667788889999999999999997777788899999999999999987665
No 111
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.75 E-value=2.5e-18 Score=177.48 Aligned_cols=172 Identities=24% Similarity=0.344 Sum_probs=124.0
Q ss_pred hhhcccCcEEEeecCcCcccCchhhhccCCcceeeeccccccCccccccccccccCeEEeeccccCccCCcccccccccc
Q 039514 356 GNLSKSLETLVIANCSISGNIPQAISNLSNLLTLVLERNKLTGPISITFGRLQKLQGLYLASNNLVGSFPDELCHIGRLA 435 (790)
Q Consensus 356 ~~l~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~ 435 (790)
..+ ++|+.|++++|.+... + .+..+++|++|++++|++++..+ +..+++|++|++++|.+.+. ..+..++
T Consensus 43 ~~l-~~L~~L~l~~~~i~~~-~-~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~--~~l~~l~--- 112 (291)
T 1h6t_A 43 NEL-NSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKDL--SSLKDLK--- 112 (291)
T ss_dssp HHH-HTCCEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCG--GGGTTCT---
T ss_pred hhc-CcccEEEccCCCcccC-h-hHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCCC--hhhccCC---
Confidence 344 6899999999999854 3 48899999999999999998765 88999999999999998742 2244444
Q ss_pred ceecccCcccccCCccccCCCCCCeeeccCCccccccCcccccCCCCceEeccCCcccccccccccccccCceEeCcCCc
Q 039514 436 ELALLDNRHSGSIPSCVSNLTSLRYLYLGSNRFTFVIPSTFWSLKDILFFDFSSNFLVGTLSFDIGNLKVLLGINLSENN 515 (790)
Q Consensus 436 ~L~l~~n~~~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~ 515 (790)
+|++|++++|++++. ..+..+++|+.|++++|.+++. ..+..+++|+.|++++|+
T Consensus 113 ---------------------~L~~L~L~~n~i~~~--~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~ 167 (291)
T 1h6t_A 113 ---------------------KLKSLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQ 167 (291)
T ss_dssp ---------------------TCCEEECTTSCCCCC--GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSC
T ss_pred ---------------------CCCEEECCCCcCCCC--hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCc
Confidence 455555555555432 2344555555555555555544 346667777777788887
Q ss_pred ccccCcccccCCcccCeeeCCCCcccccCCccccCCCCCCEEECCCCcCcc
Q 039514 516 LSGDMPATIGGLKDLQFMDLAYNRLEGPIPESFGDLTSLEVLNLSKNKISG 566 (790)
Q Consensus 516 l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 566 (790)
+++..+ +..+++|+.|++++|.+++. | .+..+++|+.|++++|+++.
T Consensus 168 l~~~~~--l~~l~~L~~L~L~~N~i~~l-~-~l~~l~~L~~L~l~~n~i~~ 214 (291)
T 1h6t_A 168 ISDIVP--LAGLTKLQNLYLSKNHISDL-R-ALAGLKNLDVLELFSQECLN 214 (291)
T ss_dssp CCCCGG--GTTCTTCCEEECCSSCCCBC-G-GGTTCTTCSEEEEEEEEEEC
T ss_pred cccchh--hcCCCccCEEECCCCcCCCC-h-hhccCCCCCEEECcCCcccC
Confidence 776554 77788888888888888753 3 37788888888888888774
No 112
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.74 E-value=8.4e-18 Score=190.24 Aligned_cols=168 Identities=26% Similarity=0.381 Sum_probs=81.9
Q ss_pred ccCcEEEeecCcCcccCchhhhccCCcceeeeccccccCccccccccccccCeEEeeccccCccCCccccccccccceec
Q 039514 360 KSLETLVIANCSISGNIPQAISNLSNLLTLVLERNKLTGPISITFGRLQKLQGLYLASNNLVGSFPDELCHIGRLAELAL 439 (790)
Q Consensus 360 ~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l 439 (790)
.+|+.|++++|.+... | .+..+++|+.|+|++|.+.+..+ +..+++|+.|+|++|.+.+. ..+..+++|+.|++
T Consensus 43 ~~L~~L~l~~n~i~~l-~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~L 116 (605)
T 1m9s_A 43 NSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDENKIKDL--SSLKDLKKLKSLSL 116 (605)
T ss_dssp TTCCCCBCTTCCCCCC-T-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCCC--TTSTTCTTCCEEEC
T ss_pred CCCCEEECcCCCCCCC-h-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECcCCCCCCC--hhhccCCCCCEEEe
Confidence 3566666666665532 2 35556666666666666655443 55566666666666655531 23444555555555
Q ss_pred ccCcccccCCccccCCCCCCeeeccCCccccccCcccccCCCCceEeccCCcccccccccccccccCceEeCcCCccccc
Q 039514 440 LDNRHSGSIPSCVSNLTSLRYLYLGSNRFTFVIPSTFWSLKDILFFDFSSNFLVGTLSFDIGNLKVLLGINLSENNLSGD 519 (790)
Q Consensus 440 ~~n~~~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 519 (790)
++|++.+. ..+..+++|+.|+|++|++++. ..+..+++|+.|+|++|.+.+..+ +..+++|+.|+|++|+|++.
T Consensus 117 s~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~i~~l 190 (605)
T 1m9s_A 117 EHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHISDL 190 (605)
T ss_dssp TTSCCCCC--GGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCBC
T ss_pred cCCCCCCC--ccccCCCccCEEECCCCccCCc--hhhcccCCCCEEECcCCcCCCchh--hccCCCCCEEECcCCCCCCC
Confidence 55554431 2344445555555555544433 334444444444444444444333 44444444444444444432
Q ss_pred CcccccCCcccCeeeCCCCccc
Q 039514 520 MPATIGGLKDLQFMDLAYNRLE 541 (790)
Q Consensus 520 ~~~~~~~l~~L~~L~Ls~N~l~ 541 (790)
..+..+++|+.|+|++|++.
T Consensus 191 --~~l~~l~~L~~L~L~~N~l~ 210 (605)
T 1m9s_A 191 --RALAGLKNLDVLELFSQECL 210 (605)
T ss_dssp --GGGTTCTTCSEEECCSEEEE
T ss_pred --hHHccCCCCCEEEccCCcCc
Confidence 12444444444444444444
No 113
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.74 E-value=6.8e-20 Score=206.17 Aligned_cols=183 Identities=21% Similarity=0.174 Sum_probs=83.2
Q ss_pred cCcEEEeecCcCcccCchhhhccCCcceeeecccc-------------ccCccccccccccccCeEE-eeccccCccCCc
Q 039514 361 SLETLVIANCSISGNIPQAISNLSNLLTLVLERNK-------------LTGPISITFGRLQKLQGLY-LASNNLVGSFPD 426 (790)
Q Consensus 361 ~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~-------------l~~~~~~~~~~l~~L~~L~-L~~n~l~~~~~~ 426 (790)
+|+.|+|++|.++ .+|..++.+++|+.|++++|. +.+..+..++.+++|+.|+ ++.|.+
T Consensus 350 ~L~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~~L~~L~~l~~n~~------ 422 (567)
T 1dce_A 350 QLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYL------ 422 (567)
T ss_dssp TSSSCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCGGGHHHH------
T ss_pred cceeccCChhhHH-hhHHHHHHHHHHHHhccccchhhhhHHHHHHhcccccCCHHHHHHHHhcccCcchhhccc------
Confidence 4555555555554 455666666666666665443 2223333334444444444 333322
Q ss_pred cccccccccceecccCcccccCCccccCCCCCCeeeccCCccccccCcccccCCCCceEeccCCcccccccccccccccC
Q 039514 427 ELCHIGRLAELALLDNRHSGSIPSCVSNLTSLRYLYLGSNRFTFVIPSTFWSLKDILFFDFSSNFLVGTLSFDIGNLKVL 506 (790)
Q Consensus 427 ~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L 506 (790)
..|..+.+.+|.+....+ ..|+.|+|++|.++++ |. +..+++|+.|++++|.++ .+|..++.+++|
T Consensus 423 -----~~L~~l~l~~n~i~~l~~------~~L~~L~Ls~n~l~~l-p~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L 488 (567)
T 1dce_A 423 -----DDLRSKFLLENSVLKMEY------ADVRVLHLAHKDLTVL-CH-LEQLLLVTHLDLSHNRLR-ALPPALAALRCL 488 (567)
T ss_dssp -----HHHHHHHHHHHHHHHHHH------TTCSEEECTTSCCSSC-CC-GGGGTTCCEEECCSSCCC-CCCGGGGGCTTC
T ss_pred -----chhhhhhhhcccccccCc------cCceEEEecCCCCCCC-cC-ccccccCcEeecCccccc-ccchhhhcCCCC
Confidence 122333333333332111 1245555555555442 32 444444444444444444 333444444444
Q ss_pred ceEeCcCCcccccCcccccCCcccCeeeCCCCcccccC-CccccCCCCCCEEECCCCcCcc
Q 039514 507 LGINLSENNLSGDMPATIGGLKDLQFMDLAYNRLEGPI-PESFGDLTSLEVLNLSKNKISG 566 (790)
Q Consensus 507 ~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~-p~~~~~l~~L~~L~L~~N~l~~ 566 (790)
+.|+|++|+|++ +| .|+++++|+.|+|++|++++.. |..++.+++|+.|+|++|++++
T Consensus 489 ~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~ 547 (567)
T 1dce_A 489 EVLQASDNALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQ 547 (567)
T ss_dssp CEEECCSSCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGG
T ss_pred CEEECCCCCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCC
Confidence 444444444443 23 4444444444444444444443 4444444444444444444443
No 114
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.74 E-value=4.5e-18 Score=192.47 Aligned_cols=190 Identities=20% Similarity=0.288 Sum_probs=144.3
Q ss_pred CcEEEeecCcCcccCchhhhccCCcceeeeccccccCccccccccccccCeEEeeccccCccCCccccccccccceeccc
Q 039514 362 LETLVIANCSISGNIPQAISNLSNLLTLVLERNKLTGPISITFGRLQKLQGLYLASNNLVGSFPDELCHIGRLAELALLD 441 (790)
Q Consensus 362 L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~ 441 (790)
+..+.+..+.+....+ +..+++|+.|++++|.+.... .+..+++|+.|+|++|.+.+..+ +..+++|+.|++++
T Consensus 23 l~~l~l~~~~i~~~~~--~~~L~~L~~L~l~~n~i~~l~--~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~ 96 (605)
T 1m9s_A 23 TIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIKSVQ--GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDE 96 (605)
T ss_dssp HHHHHTTCSCTTSEEC--HHHHTTCCCCBCTTCCCCCCT--TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECCS
T ss_pred HHHHhccCCCcccccc--hhcCCCCCEEECcCCCCCCCh--HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECcC
Confidence 4455666777765443 567889999999999888653 47788999999999999886554 77888888888888
Q ss_pred CcccccCCccccCCCCCCeeeccCCccccccCcccccCCCCceEeccCCcccccccccccccccCceEeCcCCcccccCc
Q 039514 442 NRHSGSIPSCVSNLTSLRYLYLGSNRFTFVIPSTFWSLKDILFFDFSSNFLVGTLSFDIGNLKVLLGINLSENNLSGDMP 521 (790)
Q Consensus 442 n~~~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~ 521 (790)
|.+.+ + ..+..+++|+.|+|++|++.+. ..+..+++|+.|++++|.+++. ..+..+++|+.|+|++|.|.+..|
T Consensus 97 N~l~~-l-~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~ 170 (605)
T 1m9s_A 97 NKIKD-L-SSLKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP 170 (605)
T ss_dssp SCCCC-C-TTSTTCTTCCEEECTTSCCCCC--GGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGG
T ss_pred CCCCC-C-hhhccCCCCCEEEecCCCCCCC--ccccCCCccCEEECCCCccCCc--hhhcccCCCCEEECcCCcCCCchh
Confidence 88875 2 3677888888888888888764 3477778888888888887765 456777788888888888876655
Q ss_pred ccccCCcccCeeeCCCCcccccCCccccCCCCCCEEECCCCcCccc
Q 039514 522 ATIGGLKDLQFMDLAYNRLEGPIPESFGDLTSLEVLNLSKNKISGS 567 (790)
Q Consensus 522 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 567 (790)
+..+++|+.|+|++|++++. ..+..+++|+.|+|++|++.+.
T Consensus 171 --l~~l~~L~~L~Ls~N~i~~l--~~l~~l~~L~~L~L~~N~l~~~ 212 (605)
T 1m9s_A 171 --LAGLTKLQNLYLSKNHISDL--RALAGLKNLDVLELFSQECLNK 212 (605)
T ss_dssp --GTTCTTCCEEECCSSCCCBC--GGGTTCTTCSEEECCSEEEECC
T ss_pred --hccCCCCCEEECcCCCCCCC--hHHccCCCCCEEEccCCcCcCC
Confidence 77778888888888887754 3477778888888888877754
No 115
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.73 E-value=5.2e-18 Score=163.44 Aligned_cols=155 Identities=26% Similarity=0.278 Sum_probs=118.0
Q ss_pred CeeeccCCccccccCcccccCCCCceEeccCCcccccccc-cccccccCceEeCcCCcccccCcccccCCcccCeeeCCC
Q 039514 459 RYLYLGSNRFTFVIPSTFWSLKDILFFDFSSNFLVGTLSF-DIGNLKVLLGINLSENNLSGDMPATIGGLKDLQFMDLAY 537 (790)
Q Consensus 459 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 537 (790)
+++++++|.++. +|..+. .+++.|++++|.+++..+. .+..+++|++|+|++|+|++..|..|.++++|++|+|++
T Consensus 11 ~~l~~s~~~l~~-ip~~~~--~~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 11 TTVDCTGRGLKE-IPRDIP--LHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp TEEECTTSCCSS-CCSCCC--TTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CEEEcCCCCcCc-CccCCC--CCCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 566777777653 333332 2677777777777766654 478888889999999999888888899999999999999
Q ss_pred CcccccCCccccCCCCCCEEECCCCcCcccCCccccccCCCCeEeCCCCcceecCCCCcccCCCCcccccCCcCCCCCC
Q 039514 538 NRLEGPIPESFGDLTSLEVLNLSKNKISGSIPKSMEKLFYLRELNLSFNELEGEIPSGGIFANFTAESFMGNELLCGLP 616 (790)
Q Consensus 538 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~~~~~n~~l~~~p 616 (790)
|++++..|..|.++++|++|+|++|++++..|..|..+++|++|++++|++.+.++.......+....+.++...|+.|
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~l~~~~~~l~~~~~~~~~~~C~~P 166 (192)
T 1w8a_A 88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAWFAEWLRKKSLNGGAARCGAP 166 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGGGHHHHHHHHHHCCSGGGCBBCSS
T ss_pred CcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCcchHHHHHHHHcCCCCCCCCCCCC
Confidence 9999888888999999999999999999888989999999999999999998877643322222333344555667655
No 116
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.71 E-value=3.5e-18 Score=180.10 Aligned_cols=292 Identities=17% Similarity=0.133 Sum_probs=166.1
Q ss_pred CCCCCEEECCCCCCcccCChhhhC-CCCCCEEeCCCCCCc--ccCCccccCCCCCcEEEccCccCcccCchhhhcc----
Q 039514 76 LSSLTILNLSHNKLSGSVPSSIYT-MHTLKFLDFTDNQLS--GSVSSFVFNMSSIVDIRLTNNRLSGELPKNICNY---- 148 (790)
Q Consensus 76 l~~L~~L~Ls~N~i~~~~~~~~~~-l~~L~~L~Ls~n~l~--~~~~~~~~~l~~L~~L~L~~N~l~~~lp~~~~~~---- 148 (790)
+.+++.|+++++ +.......+.. +++|++|||++|+|. ...+..+.. +..+.+..| .||...|.+
T Consensus 24 ~~~l~~L~l~g~-i~~~~~~~l~~~l~~L~~LdLs~n~i~~~~~~~~~~~~---~~~~~~~~~----~I~~~aF~~~~~~ 95 (329)
T 3sb4_A 24 ANSITHLTLTGK-LNAEDFRHLRDEFPSLKVLDISNAEIKMYSGKAGTYPN---GKFYIYMAN----FVPAYAFSNVVNG 95 (329)
T ss_dssp HHHCSEEEEEEE-ECHHHHHHHHHSCTTCCEEEEEEEEECCEEESSSSSGG---GCCEEECTT----EECTTTTEEEETT
T ss_pred hCceeEEEEecc-ccHHHHHHHHHhhccCeEEecCcceeEEecCccccccc---ccccccccc----ccCHHHhcccccc
Confidence 567888888764 32222233444 778889999988887 333333322 344555555 567777888
Q ss_pred ----CCCCCEEECCCCcCcccCCcCCCCCCCCCeeecccCcccccCcccccccCCCCceecccccccceEEcccccCccc
Q 039514 149 ----LPHLKALFLDKNMFHGKIPSALSKCKQLQQLNLQLNNLSGAIPKEIGNLTMLKGISLLYNKLQEALVLGMNNLVGV 224 (790)
Q Consensus 149 ----l~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~l~l~~n~l~~~ 224 (790)
+++|+.|+|.. .++.+.+.+|.++++|+.|++..|.++.+.+.+|.++.++..+....+.. .......
T Consensus 96 ~~~g~~~L~~l~L~~-~i~~I~~~aF~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~-------~~~~~~i 167 (329)
T 3sb4_A 96 VTKGKQTLEKVILSE-KIKNIEDAAFKGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDA-------YRFKNRW 167 (329)
T ss_dssp EEEECTTCCC-CBCT-TCCEECTTTTTTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHH-------HHTSTTT
T ss_pred cccccCCCcEEECCc-cccchhHHHhhcCcccceEEcCCCCccccchhhhcCCCceEEecCcchhh-------hhccccc
Confidence 88899999988 78878888898999999999998888878888888777666554433211 0111222
Q ss_pred cCccccCCCCCc-EEEcccCCCcccCCcchhcCCCCcceEeecCCcccccCCccccCCCCCCEEeccCCcccccCccccc
Q 039514 225 LPATIFNMSTLK-VLILINNSLSGSLPSRIDLSLPTVEVLILALNRFFGTIPSSITNASKLTVLELGGNTFSGLIPDTIG 303 (790)
Q Consensus 225 ~p~~~~~l~~L~-~L~L~~n~l~~~~p~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~ 303 (790)
.+..|.++..|+ .+.+.... .++...+.. -....+++.+.+.++-..........
T Consensus 168 ~~~~f~~~~~L~~~i~~~~~~---~l~~~~~~~---------------------~~~~~~~~~l~~~~~l~~~~~~~l~~ 223 (329)
T 3sb4_A 168 EHFAFIEGEPLETTIQVGAMG---KLEDEIMKA---------------------GLQPRDINFLTIEGKLDNADFKLIRD 223 (329)
T ss_dssp TTSCEEESCCCEEEEEECTTC---CHHHHHHHT---------------------TCCGGGCSEEEEEECCCHHHHHHHHH
T ss_pred cccccccccccceeEEecCCC---cHHHHHhhc---------------------ccCccccceEEEeeeecHHHHHHHHH
Confidence 334455555555 44443221 222222111 00112223333332211100000011
Q ss_pred CCCCCccccccCCcccCCCCcccccccCCCCCCCCEEEccCCCCcccCCchhhhhcccCc-EEEeecCcCcccCchhhhc
Q 039514 304 NLRNLEWLNLSKNSLTSSTSKLSFLSSLANCKKLRSLKLAGNPLDGFLPSSIGNLSKSLE-TLVIANCSISGNIPQAISN 382 (790)
Q Consensus 304 ~l~~L~~L~Ls~n~l~~~~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~~L~-~L~l~~n~l~~~~p~~~~~ 382 (790)
.+++|+.++|++|.++.++. .+|.+|++|+.+++.+| +....+..|... .+|+ .+++.+ .++.+.+.+|.+
T Consensus 224 ~~~~L~~l~L~~n~i~~I~~-----~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~-~~L~~~l~l~~-~l~~I~~~aF~~ 295 (329)
T 3sb4_A 224 YMPNLVSLDISKTNATTIPD-----FTFAQKKYLLKIKLPHN-LKTIGQRVFSNC-GRLAGTLELPA-SVTAIEFGAFMG 295 (329)
T ss_dssp HCTTCCEEECTTBCCCEECT-----TTTTTCTTCCEEECCTT-CCEECTTTTTTC-TTCCEEEEECT-TCCEECTTTTTT
T ss_pred hcCCCeEEECCCCCcceecH-----hhhhCCCCCCEEECCcc-cceehHHHhhCC-hhccEEEEEcc-cceEEchhhhhC
Confidence 13444444444444444432 23445555555555554 443333344443 4566 666666 555566678888
Q ss_pred cCCcceeeeccccccCccccccccccccCeEEe
Q 039514 383 LSNLLTLVLERNKLTGPISITFGRLQKLQGLYL 415 (790)
Q Consensus 383 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 415 (790)
+++|+.++++.|.++.+.+.+|.++++|+.++.
T Consensus 296 c~~L~~l~l~~n~i~~I~~~aF~~~~~L~~ly~ 328 (329)
T 3sb4_A 296 CDNLRYVLATGDKITTLGDELFGNGVPSKLIYK 328 (329)
T ss_dssp CTTEEEEEECSSCCCEECTTTTCTTCCCCEEEC
T ss_pred CccCCEEEeCCCccCccchhhhcCCcchhhhcc
Confidence 888888888888888888888888888888764
No 117
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.71 E-value=3e-17 Score=159.02 Aligned_cols=153 Identities=16% Similarity=0.198 Sum_probs=98.1
Q ss_pred ccccccCeEEeeccccCccCCccccccccccceecccCcccccCCccccCCCCCCeeeccCCccccccCcccccCCCCce
Q 039514 405 GRLQKLQGLYLASNNLVGSFPDELCHIGRLAELALLDNRHSGSIPSCVSNLTSLRYLYLGSNRFTFVIPSTFWSLKDILF 484 (790)
Q Consensus 405 ~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 484 (790)
..+++|+.|++++|.+. .+| .+..+ ++|++|++++|.++. +..+..+++|++
T Consensus 41 ~~l~~L~~L~l~~n~i~-~l~-~l~~l------------------------~~L~~L~l~~n~~~~--~~~l~~l~~L~~ 92 (197)
T 4ezg_A 41 AQMNSLTYITLANINVT-DLT-GIEYA------------------------HNIKDLTINNIHATN--YNPISGLSNLER 92 (197)
T ss_dssp HHHHTCCEEEEESSCCS-CCT-TGGGC------------------------TTCSEEEEESCCCSC--CGGGTTCTTCCE
T ss_pred hhcCCccEEeccCCCcc-ChH-HHhcC------------------------CCCCEEEccCCCCCc--chhhhcCCCCCE
Confidence 55667777777777665 233 34444 455555555554432 224455555666
Q ss_pred EeccCCcccccccccccccccCceEeCcCCcccccCcccccCCcccCeeeCCCCc-ccccCCccccCCCCCCEEECCCCc
Q 039514 485 FDFSSNFLVGTLSFDIGNLKVLLGINLSENNLSGDMPATIGGLKDLQFMDLAYNR-LEGPIPESFGDLTSLEVLNLSKNK 563 (790)
Q Consensus 485 L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~l~~L~~L~L~~N~ 563 (790)
|++++|.+++..+..+..+++|++|++++|++++..|..+..+++|++|++++|+ ++ .+| .+..+++|++|++++|.
T Consensus 93 L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~-~~~-~l~~l~~L~~L~l~~n~ 170 (197)
T 4ezg_A 93 LRIMGKDVTSDKIPNLSGLTSLTLLDISHSAHDDSILTKINTLPKVNSIDLSYNGAIT-DIM-PLKTLPELKSLNIQFDG 170 (197)
T ss_dssp EEEECTTCBGGGSCCCTTCTTCCEEECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCC-CCG-GGGGCSSCCEEECTTBC
T ss_pred EEeECCccCcccChhhcCCCCCCEEEecCCccCcHhHHHHhhCCCCCEEEccCCCCcc-ccH-hhcCCCCCCEEECCCCC
Confidence 6666666655555566667777777777777776667777777777888888777 54 344 57777888888888888
Q ss_pred CcccCCccccccCCCCeEeCCCCcce
Q 039514 564 ISGSIPKSMEKLFYLRELNLSFNELE 589 (790)
Q Consensus 564 l~~~~p~~~~~l~~L~~L~Ls~N~l~ 589 (790)
+++ ++ .+..+++|++|++++|++.
T Consensus 171 i~~-~~-~l~~l~~L~~L~l~~N~i~ 194 (197)
T 4ezg_A 171 VHD-YR-GIEDFPKLNQLYAFSQTIG 194 (197)
T ss_dssp CCC-CT-TGGGCSSCCEEEECBC---
T ss_pred CcC-hH-HhccCCCCCEEEeeCcccC
Confidence 775 33 6777788888888888764
No 118
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.71 E-value=3e-19 Score=200.95 Aligned_cols=192 Identities=20% Similarity=0.187 Sum_probs=155.4
Q ss_pred hccCCcceeeeccccccCccccccccccccCeEEeeccc-------------cCccCCcccccccccccee-cccCcccc
Q 039514 381 SNLSNLLTLVLERNKLTGPISITFGRLQKLQGLYLASNN-------------LVGSFPDELCHIGRLAELA-LLDNRHSG 446 (790)
Q Consensus 381 ~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~-------------l~~~~~~~~~~l~~L~~L~-l~~n~~~~ 446 (790)
...++|+.|+|++|+++ .+|..++.+++|+.|++++|. +.+..|..+..+++|+.|+ +..|.+
T Consensus 346 ~~~~~L~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~~L~~L~~l~~n~~-- 422 (567)
T 1dce_A 346 ATDEQLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYL-- 422 (567)
T ss_dssp STTTTSSSCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCGGGHHHH--
T ss_pred ccCccceeccCChhhHH-hhHHHHHHHHHHHHhccccchhhhhHHHHHHhcccccCCHHHHHHHHhcccCcchhhccc--
Confidence 45778888889888887 457778888888888887665 3445555666666666666 444433
Q ss_pred cCCccccCCCCCCeeeccCCccccccCcccccCCCCceEeccCCcccccccccccccccCceEeCcCCcccccCcccccC
Q 039514 447 SIPSCVSNLTSLRYLYLGSNRFTFVIPSTFWSLKDILFFDFSSNFLVGTLSFDIGNLKVLLGINLSENNLSGDMPATIGG 526 (790)
Q Consensus 447 ~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~ 526 (790)
..|+.+.+++|.++...+ ..|+.|++++|.+++. |. ++.+++|+.|+|++|+|+ .+|..|++
T Consensus 423 ---------~~L~~l~l~~n~i~~l~~------~~L~~L~Ls~n~l~~l-p~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~ 484 (567)
T 1dce_A 423 ---------DDLRSKFLLENSVLKMEY------ADVRVLHLAHKDLTVL-CH-LEQLLLVTHLDLSHNRLR-ALPPALAA 484 (567)
T ss_dssp ---------HHHHHHHHHHHHHHHHHH------TTCSEEECTTSCCSSC-CC-GGGGTTCCEEECCSSCCC-CCCGGGGG
T ss_pred ---------chhhhhhhhcccccccCc------cCceEEEecCCCCCCC-cC-ccccccCcEeecCccccc-ccchhhhc
Confidence 234556666677665433 2589999999999985 44 999999999999999999 77889999
Q ss_pred CcccCeeeCCCCcccccCCccccCCCCCCEEECCCCcCcccC-CccccccCCCCeEeCCCCcceecCCCC
Q 039514 527 LKDLQFMDLAYNRLEGPIPESFGDLTSLEVLNLSKNKISGSI-PKSMEKLFYLRELNLSFNELEGEIPSG 595 (790)
Q Consensus 527 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~-p~~~~~l~~L~~L~Ls~N~l~~~~p~~ 595 (790)
+++|+.|+|++|+|++ +| .++.+++|++|+|++|+|++.. |..+..+++|+.|+|++|++++.+|..
T Consensus 485 l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~ 552 (567)
T 1dce_A 485 LRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQ 552 (567)
T ss_dssp CTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSCT
T ss_pred CCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCccHH
Confidence 9999999999999997 56 8999999999999999999887 999999999999999999999877644
No 119
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.70 E-value=1.8e-17 Score=168.27 Aligned_cols=171 Identities=22% Similarity=0.289 Sum_probs=117.4
Q ss_pred ccCCcceeeeccccccCccccccccccccCeEEeeccccCccCCccccccccccceecccCcccccCCccccCCCCCCee
Q 039514 382 NLSNLLTLVLERNKLTGPISITFGRLQKLQGLYLASNNLVGSFPDELCHIGRLAELALLDNRHSGSIPSCVSNLTSLRYL 461 (790)
Q Consensus 382 ~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L 461 (790)
.+.++..+++++|.+++.. .+..+++|+.|++++|.+.. ++ . +..+++|++|
T Consensus 17 ~l~~l~~l~l~~~~i~~~~--~~~~l~~L~~L~l~~n~i~~-l~-~------------------------l~~l~~L~~L 68 (263)
T 1xeu_A 17 GLANAVKQNLGKQSVTDLV--SQKELSGVQNFNGDNSNIQS-LA-G------------------------MQFFTNLKEL 68 (263)
T ss_dssp HHHHHHHHHHTCSCTTSEE--CHHHHTTCSEEECTTSCCCC-CT-T------------------------GGGCTTCCEE
T ss_pred HHHHHHHHHhcCCCccccc--chhhcCcCcEEECcCCCccc-ch-H------------------------HhhCCCCCEE
Confidence 4556677777777776544 45667777777777777652 22 3 3444555555
Q ss_pred eccCCccccccCcccccCCCCceEeccCCcccccccccccccccCceEeCcCCcccccCcccccCCcccCeeeCCCCccc
Q 039514 462 YLGSNRFTFVIPSTFWSLKDILFFDFSSNFLVGTLSFDIGNLKVLLGINLSENNLSGDMPATIGGLKDLQFMDLAYNRLE 541 (790)
Q Consensus 462 ~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 541 (790)
++++|++++..+ +..+++|+.|++++|++++..+.. . +.|+.|++++|++++. ..+..+++|+.|+|++|+++
T Consensus 69 ~L~~N~i~~~~~--l~~l~~L~~L~L~~N~l~~l~~~~--~-~~L~~L~L~~N~l~~~--~~l~~l~~L~~L~Ls~N~i~ 141 (263)
T 1xeu_A 69 HLSHNQISDLSP--LKDLTKLEELSVNRNRLKNLNGIP--S-ACLSRLFLDNNELRDT--DSLIHLKNLEILSIRNNKLK 141 (263)
T ss_dssp ECCSSCCCCCGG--GTTCSSCCEEECCSSCCSCCTTCC--C-SSCCEEECCSSCCSBS--GGGTTCTTCCEEECTTSCCC
T ss_pred ECCCCccCCChh--hccCCCCCEEECCCCccCCcCccc--c-CcccEEEccCCccCCC--hhhcCcccccEEECCCCcCC
Confidence 555555554443 555556666666666655433222 2 6778888888888754 35788888888888888888
Q ss_pred ccCCccccCCCCCCEEECCCCcCcccCCccccccCCCCeEeCCCCcceec
Q 039514 542 GPIPESFGDLTSLEVLNLSKNKISGSIPKSMEKLFYLRELNLSFNELEGE 591 (790)
Q Consensus 542 ~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 591 (790)
+. + .+..+++|++|++++|++++. ..+..+++|+.|++++|++++.
T Consensus 142 ~~-~-~l~~l~~L~~L~L~~N~i~~~--~~l~~l~~L~~L~l~~N~~~~~ 187 (263)
T 1xeu_A 142 SI-V-MLGFLSKLEVLDLHGNEITNT--GGLTRLKKVNWIDLTGQKCVNE 187 (263)
T ss_dssp BC-G-GGGGCTTCCEEECTTSCCCBC--TTSTTCCCCCEEEEEEEEEECC
T ss_pred CC-h-HHccCCCCCEEECCCCcCcch--HHhccCCCCCEEeCCCCcccCC
Confidence 64 3 578888889999999988865 6778888899999999988754
No 120
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.70 E-value=1.2e-17 Score=169.62 Aligned_cols=169 Identities=19% Similarity=0.206 Sum_probs=119.3
Q ss_pred ccCcEEEeecCcCcccCchhhhccCCcceeeeccccccCccccccccccccCeEEeeccccCccCCccccccccccceec
Q 039514 360 KSLETLVIANCSISGNIPQAISNLSNLLTLVLERNKLTGPISITFGRLQKLQGLYLASNNLVGSFPDELCHIGRLAELAL 439 (790)
Q Consensus 360 ~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l 439 (790)
..+..+++++|.+++.. .+..+++|+.|++++|.++... .+..+++|++|++++|.+.+..+ +..+++|+.|++
T Consensus 19 ~~l~~l~l~~~~i~~~~--~~~~l~~L~~L~l~~n~i~~l~--~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L~L 92 (263)
T 1xeu_A 19 ANAVKQNLGKQSVTDLV--SQKELSGVQNFNGDNSNIQSLA--GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEELSV 92 (263)
T ss_dssp HHHHHHHHTCSCTTSEE--CHHHHTTCSEEECTTSCCCCCT--TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEEEC
T ss_pred HHHHHHHhcCCCccccc--chhhcCcCcEEECcCCCcccch--HHhhCCCCCEEECCCCccCCChh--hccCCCCCEEEC
Confidence 35777889999998543 6889999999999999998754 68889999999999999885433 555555555555
Q ss_pred ccCcccccCCccccCCCCCCeeeccCCccccccCcccccCCCCceEeccCCcccccccccccccccCceEeCcCCccccc
Q 039514 440 LDNRHSGSIPSCVSNLTSLRYLYLGSNRFTFVIPSTFWSLKDILFFDFSSNFLVGTLSFDIGNLKVLLGINLSENNLSGD 519 (790)
Q Consensus 440 ~~n~~~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 519 (790)
++|++.+ ..+.. . ++|+.|++++|.+++. ..+..+++|+.|++++|++++.
T Consensus 93 ~~N~l~~------------------------l~~~~--~-~~L~~L~L~~N~l~~~--~~l~~l~~L~~L~Ls~N~i~~~ 143 (263)
T 1xeu_A 93 NRNRLKN------------------------LNGIP--S-ACLSRLFLDNNELRDT--DSLIHLKNLEILSIRNNKLKSI 143 (263)
T ss_dssp CSSCCSC------------------------CTTCC--C-SSCCEEECCSSCCSBS--GGGTTCTTCCEEECTTSCCCBC
T ss_pred CCCccCC------------------------cCccc--c-CcccEEEccCCccCCC--hhhcCcccccEEECCCCcCCCC
Confidence 5555543 22111 1 4455555555555443 1356677777777777777754
Q ss_pred CcccccCCcccCeeeCCCCcccccCCccccCCCCCCEEECCCCcCccc
Q 039514 520 MPATIGGLKDLQFMDLAYNRLEGPIPESFGDLTSLEVLNLSKNKISGS 567 (790)
Q Consensus 520 ~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 567 (790)
+ .+..+++|+.|++++|++++. ..+..+++|+.|++++|.+++.
T Consensus 144 -~-~l~~l~~L~~L~L~~N~i~~~--~~l~~l~~L~~L~l~~N~~~~~ 187 (263)
T 1xeu_A 144 -V-MLGFLSKLEVLDLHGNEITNT--GGLTRLKKVNWIDLTGQKCVNE 187 (263)
T ss_dssp -G-GGGGCTTCCEEECTTSCCCBC--TTSTTCCCCCEEEEEEEEEECC
T ss_pred -h-HHccCCCCCEEECCCCcCcch--HHhccCCCCCEEeCCCCcccCC
Confidence 2 577778888888888888765 5677788888888888887754
No 121
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.70 E-value=7e-17 Score=156.38 Aligned_cols=155 Identities=16% Similarity=0.234 Sum_probs=99.5
Q ss_pred hhhccCCcceeeeccccccCccccccccccccCeEEeeccccCccCCccccccccccceecccCcccccCCccccCCCCC
Q 039514 379 AISNLSNLLTLVLERNKLTGPISITFGRLQKLQGLYLASNNLVGSFPDELCHIGRLAELALLDNRHSGSIPSCVSNLTSL 458 (790)
Q Consensus 379 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L 458 (790)
....+++|+.|++++|.++... .+..+++|++|++++|.+. .+..+..+++|++|++++|++.+..+..+..+++|
T Consensus 39 ~~~~l~~L~~L~l~~n~i~~l~--~l~~l~~L~~L~l~~n~~~--~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L 114 (197)
T 4ezg_A 39 TEAQMNSLTYITLANINVTDLT--GIEYAHNIKDLTINNIHAT--NYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSL 114 (197)
T ss_dssp BHHHHHTCCEEEEESSCCSCCT--TGGGCTTCSEEEEESCCCS--CCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTC
T ss_pred ChhhcCCccEEeccCCCccChH--HHhcCCCCCEEEccCCCCC--cchhhhcCCCCCEEEeECCccCcccChhhcCCCCC
Confidence 3478899999999999999544 5889999999999999664 22345555555555555555554444444455555
Q ss_pred CeeeccCCccccccCcccccCCCCceEeccCCcccccccccccccccCceEeCcCCc-ccccCcccccCCcccCeeeCCC
Q 039514 459 RYLYLGSNRFTFVIPSTFWSLKDILFFDFSSNFLVGTLSFDIGNLKVLLGINLSENN-LSGDMPATIGGLKDLQFMDLAY 537 (790)
Q Consensus 459 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~-l~~~~~~~~~~l~~L~~L~Ls~ 537 (790)
++|++++|+ +++..+..+..+++|++|++++|. ++ .+| .+..+++|+.|++++
T Consensus 115 ~~L~Ls~n~------------------------i~~~~~~~l~~l~~L~~L~L~~n~~i~-~~~-~l~~l~~L~~L~l~~ 168 (197)
T 4ezg_A 115 TLLDISHSA------------------------HDDSILTKINTLPKVNSIDLSYNGAIT-DIM-PLKTLPELKSLNIQF 168 (197)
T ss_dssp CEEECCSSB------------------------CBGGGHHHHTTCSSCCEEECCSCTBCC-CCG-GGGGCSSCCEEECTT
T ss_pred CEEEecCCc------------------------cCcHhHHHHhhCCCCCEEEccCCCCcc-ccH-hhcCCCCCCEEECCC
Confidence 555555554 444444455556666666666665 43 333 466777777777777
Q ss_pred CcccccCCccccCCCCCCEEECCCCcCc
Q 039514 538 NRLEGPIPESFGDLTSLEVLNLSKNKIS 565 (790)
Q Consensus 538 N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 565 (790)
|++++. + .+..+++|+.|++++|++.
T Consensus 169 n~i~~~-~-~l~~l~~L~~L~l~~N~i~ 194 (197)
T 4ezg_A 169 DGVHDY-R-GIEDFPKLNQLYAFSQTIG 194 (197)
T ss_dssp BCCCCC-T-TGGGCSSCCEEEECBC---
T ss_pred CCCcCh-H-HhccCCCCCEEEeeCcccC
Confidence 777653 3 5667777777777777765
No 122
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.68 E-value=2e-16 Score=152.29 Aligned_cols=131 Identities=24% Similarity=0.296 Sum_probs=114.0
Q ss_pred EEECCCCCcceeccccCCCCCCCCEEECCCCCCcccCCh-hhhCCCCCCEEeCCCCCCcccCCccccCCCCCcEEEccCc
Q 039514 57 ALDTSQFNLQGTIPSQLGNLSSLTILNLSHNKLSGSVPS-SIYTMHTLKFLDFTDNQLSGSVSSFVFNMSSIVDIRLTNN 135 (790)
Q Consensus 57 ~Ldl~~~~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~-~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N 135 (790)
.+|+++++++ .+|..+.. +|++|+|++|.|++..+. .|..+++|++|+|++|+|++..|..|.++++|++|+|++|
T Consensus 12 ~l~~s~~~l~-~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N 88 (192)
T 1w8a_A 12 TVDCTGRGLK-EIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGEN 88 (192)
T ss_dssp EEECTTSCCS-SCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSC
T ss_pred EEEcCCCCcC-cCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCCC
Confidence 5677888885 56776654 899999999999987775 5999999999999999999999999999999999999999
Q ss_pred cCcccCchhhhccCCCCCEEECCCCcCcccCCcCCCCCCCCCeeecccCcccccCc
Q 039514 136 RLSGELPKNICNYLPHLKALFLDKNMFHGKIPSALSKCKQLQQLNLQLNNLSGAIP 191 (790)
Q Consensus 136 ~l~~~lp~~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~~ 191 (790)
+++ .++...|..+++|++|+|++|.+++..|..|..+++|++|+|++|.+++..+
T Consensus 89 ~l~-~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 143 (192)
T 1w8a_A 89 KIK-EISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCH 143 (192)
T ss_dssp CCC-EECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGG
T ss_pred cCC-ccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCc
Confidence 998 5555656889999999999999999999999999999999999999886543
No 123
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.67 E-value=1.8e-17 Score=192.57 Aligned_cols=143 Identities=23% Similarity=0.262 Sum_probs=69.9
Q ss_pred cCchhhhccCCcceeeeccccccCccccccccccccCeEEeeccccCccCCccccccccccceecccCcccccCCccccC
Q 039514 375 NIPQAISNLSNLLTLVLERNKLTGPISITFGRLQKLQGLYLASNNLVGSFPDELCHIGRLAELALLDNRHSGSIPSCVSN 454 (790)
Q Consensus 375 ~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~p~~~~~ 454 (790)
..|..+..++.|+.|+|++|.+..+. ..+..+++|++|+|++|.++ .+|..+..+++|+.|+|++|+++ .+|..+..
T Consensus 215 ~~~~~~~~l~~L~~L~Ls~n~l~~l~-~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~ 291 (727)
T 4b8c_D 215 MPKDSKYDDQLWHALDLSNLQIFNIS-ANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLPAELGS 291 (727)
T ss_dssp -------CCCCCCEEECTTSCCSCCC-GGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SCCSSGGG
T ss_pred cChhhhccCCCCcEEECCCCCCCCCC-hhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-ccChhhcC
Confidence 34555666666666666666665332 23335566666666666665 45555555555555555555555 44555555
Q ss_pred CCCCCeeeccCCccccccCcccccCCCCceEeccCCccccccccccccccc-CceEeCcCCcccccCc
Q 039514 455 LTSLRYLYLGSNRFTFVIPSTFWSLKDILFFDFSSNFLVGTLSFDIGNLKV-LLGINLSENNLSGDMP 521 (790)
Q Consensus 455 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~-L~~L~Ls~N~l~~~~~ 521 (790)
+++|++|+|++|.|+ .+|..|..+++|+.|+|++|.+++.+|..+..+.. +..++|++|.+++.+|
T Consensus 292 l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p 358 (727)
T 4b8c_D 292 CFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPLP 358 (727)
T ss_dssp GTTCSEEECCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCC
T ss_pred CCCCCEEECCCCCCC-ccChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccCcCc
Confidence 555555555555554 23444555555555555555555444444333211 1123444444444443
No 124
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=99.67 E-value=1.6e-16 Score=165.55 Aligned_cols=91 Identities=29% Similarity=0.560 Sum_probs=82.1
Q ss_pred cCccccceeccCCcEEEEEEEEc------CCcEEEEEEecccchHHHHHHHHHHHHHhcCCCCceeeEeeEEEeCCeEEE
Q 039514 698 DNFAENNIIGRGGFGSVYGARLE------DGMKIAIKVFHQQCASALKSFEAECEVLKKIRHRNLIKVISSCSNDDFKAL 771 (790)
Q Consensus 698 ~~~~~~~~ig~g~~g~v~~~~~~------~~~~vavK~~~~~~~~~~~~~~~e~~~l~~~~h~nlv~l~~~~~~~~~~~l 771 (790)
++|...+.||+|+||.||+|++. +++.||||+++.......++|.+|+++|++++|||||+++|+|.+++..|+
T Consensus 41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~l 120 (329)
T 4aoj_A 41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLM 120 (329)
T ss_dssp GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEE
Confidence 45777889999999999999864 478899999987776677889999999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHhcC
Q 039514 772 VLEYMSNGSLGDWLHSS 788 (790)
Q Consensus 772 v~e~~~~G~L~~~l~~~ 788 (790)
|||||++|+|.++|+..
T Consensus 121 V~Ey~~~G~L~~~l~~~ 137 (329)
T 4aoj_A 121 VFEYMRHGDLNRFLRSH 137 (329)
T ss_dssp EEECCTTCBHHHHHHTS
T ss_pred EEEcCCCCcHHHHHHhc
Confidence 99999999999999864
No 125
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=99.66 E-value=1.1e-16 Score=164.26 Aligned_cols=91 Identities=30% Similarity=0.567 Sum_probs=80.2
Q ss_pred cCccccceeccCCcEEEEEEEEc------CCcEEEEEEecccchHHHHHHHHHHHHHhcCCCCceeeEeeEEEeCCeEEE
Q 039514 698 DNFAENNIIGRGGFGSVYGARLE------DGMKIAIKVFHQQCASALKSFEAECEVLKKIRHRNLIKVISSCSNDDFKAL 771 (790)
Q Consensus 698 ~~~~~~~~ig~g~~g~v~~~~~~------~~~~vavK~~~~~~~~~~~~~~~e~~~l~~~~h~nlv~l~~~~~~~~~~~l 771 (790)
++|...+.||+|+||.||+|++. +++.||||+++.......++|.+|+++|++++|||||+++|+|.+++..|+
T Consensus 13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~l 92 (299)
T 4asz_A 13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIM 92 (299)
T ss_dssp GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEE
Confidence 56778899999999999999853 478899999987766667889999999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHhcC
Q 039514 772 VLEYMSNGSLGDWLHSS 788 (790)
Q Consensus 772 v~e~~~~G~L~~~l~~~ 788 (790)
|||||++|+|.++|+..
T Consensus 93 V~Ey~~~G~L~~~l~~~ 109 (299)
T 4asz_A 93 VFEYMKHGDLNKFLRAH 109 (299)
T ss_dssp EEECCTTCBHHHHHHHT
T ss_pred EEEcCCCCcHHHHHHhc
Confidence 99999999999999864
No 126
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.66 E-value=4.5e-16 Score=147.90 Aligned_cols=135 Identities=25% Similarity=0.380 Sum_probs=115.1
Q ss_pred CCccccccCCCCCcEEEEECCCCCcceeccccCCCCCCCCEEECCCCCCcccCChhhhCCCCCCEEeCCCCCCcccCCcc
Q 039514 41 CTWIGITCDVNSHRVTALDTSQFNLQGTIPSQLGNLSSLTILNLSHNKLSGSVPSSIYTMHTLKFLDFTDNQLSGSVSSF 120 (790)
Q Consensus 41 c~w~gv~c~~~~~~v~~Ldl~~~~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~ 120 (790)
|.|.++.|+. ++++ .+|..+. ++|++|++++|.+++..+..|..+++|++|++++|++++..+..
T Consensus 7 C~~~~l~~~~------------~~l~-~~p~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~ 71 (177)
T 2o6r_A 7 CSGTEIRCNS------------KGLT-SVPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGV 71 (177)
T ss_dssp EETTEEECCS------------SCCS-SCCTTCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTT
T ss_pred eCCCEEEecC------------CCCc-cCCCCCC--CCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhH
Confidence 5677776654 3444 3454443 68999999999999888888999999999999999999888888
Q ss_pred ccCCCCCcEEEccCccCcccCchhhhccCCCCCEEECCCCcCcccCCcCCCCCCCCCeeecccCcccccCc
Q 039514 121 VFNMSSIVDIRLTNNRLSGELPKNICNYLPHLKALFLDKNMFHGKIPSALSKCKQLQQLNLQLNNLSGAIP 191 (790)
Q Consensus 121 ~~~l~~L~~L~L~~N~l~~~lp~~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~~ 191 (790)
|.++++|++|++++|+++ .+|...+..+++|++|++++|.+++..+..|..+++|++|++++|.+++..|
T Consensus 72 ~~~l~~L~~L~l~~N~l~-~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 72 FDKLTKLTILYLHENKLQ-SLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp TTTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred ccCCCccCEEECCCCCcc-ccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccCc
Confidence 999999999999999999 7777777889999999999999998877778999999999999999986544
No 127
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.65 E-value=2.1e-16 Score=152.04 Aligned_cols=131 Identities=24% Similarity=0.304 Sum_probs=108.7
Q ss_pred CeeeccCCccccccCcccccCCCCceEeccCCcccccccccccccccCceEeCcCCcccccCcccccCCcccCeeeCCCC
Q 039514 459 RYLYLGSNRFTFVIPSTFWSLKDILFFDFSSNFLVGTLSFDIGNLKVLLGINLSENNLSGDMPATIGGLKDLQFMDLAYN 538 (790)
Q Consensus 459 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N 538 (790)
+++++++|.++.+ |..+ .++++.|++++|.++ .+|..+.++++|+.|+|++|+|+++.+..|.++++|++|+|++|
T Consensus 13 ~~l~~~~~~l~~i-p~~~--~~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N 88 (193)
T 2wfh_A 13 TVVRCSNKGLKVL-PKGI--PRDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYN 88 (193)
T ss_dssp TEEECTTSCCSSC-CSCC--CTTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEcCCCCCCcC-CCCC--CCCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCC
Confidence 4567777777643 3322 246777888888776 44567888899999999999999888888999999999999999
Q ss_pred cccccCCccccCCCCCCEEECCCCcCcccCCccccccCCCCeEeCCCCcceecCC
Q 039514 539 RLEGPIPESFGDLTSLEVLNLSKNKISGSIPKSMEKLFYLRELNLSFNELEGEIP 593 (790)
Q Consensus 539 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 593 (790)
++++..|..|.++++|++|+|++|+|+...+..|..+++|+.|++++|++.+...
T Consensus 89 ~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C~c~ 143 (193)
T 2wfh_A 89 RLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCDCN 143 (193)
T ss_dssp CCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEECSGG
T ss_pred ccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeecCCc
Confidence 9999888899999999999999999997777789999999999999999987554
No 128
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.65 E-value=1.7e-16 Score=167.12 Aligned_cols=102 Identities=16% Similarity=0.113 Sum_probs=58.8
Q ss_pred CCCCceEeccCCcccccccccccccccCceEeCcCCcccccCcccccCCcccC-eeeCCCCcccccCCccccCCCCCCEE
Q 039514 479 LKDILFFDFSSNFLVGTLSFDIGNLKVLLGINLSENNLSGDMPATIGGLKDLQ-FMDLAYNRLEGPIPESFGDLTSLEVL 557 (790)
Q Consensus 479 l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~-~L~Ls~N~l~~~~p~~~~~l~~L~~L 557 (790)
+++|+.+++++|.++......|.++.+|+.|+|.+| +..+.+.+|.++++|+ .+++++ .++.+.+.+|.++++|+.+
T Consensus 225 ~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l 302 (329)
T 3sb4_A 225 MPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYV 302 (329)
T ss_dssp CTTCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEE
T ss_pred cCCCeEEECCCCCcceecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEE
Confidence 344444555544444444445555555555555555 5555555666666666 666665 5555555666666666666
Q ss_pred ECCCCcCcccCCccccccCCCCeEe
Q 039514 558 NLSKNKISGSIPKSMEKLFYLRELN 582 (790)
Q Consensus 558 ~L~~N~l~~~~p~~~~~l~~L~~L~ 582 (790)
++++|.++...+.+|.++++|+.++
T Consensus 303 ~l~~n~i~~I~~~aF~~~~~L~~ly 327 (329)
T 3sb4_A 303 LATGDKITTLGDELFGNGVPSKLIY 327 (329)
T ss_dssp EECSSCCCEECTTTTCTTCCCCEEE
T ss_pred EeCCCccCccchhhhcCCcchhhhc
Confidence 6666666655555666666666654
No 129
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.64 E-value=5.5e-16 Score=145.93 Aligned_cols=132 Identities=21% Similarity=0.215 Sum_probs=89.8
Q ss_pred CCCCEEECCCCCCc-ccCChhhhCCCCCCEEeCCCCCCcccCCccccCCCCCcEEEccCccCcccCchhhhccCCCCCEE
Q 039514 77 SSLTILNLSHNKLS-GSVPSSIYTMHTLKFLDFTDNQLSGSVSSFVFNMSSIVDIRLTNNRLSGELPKNICNYLPHLKAL 155 (790)
Q Consensus 77 ~~L~~L~Ls~N~i~-~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~lp~~~~~~l~~L~~L 155 (790)
++|++|++++|.+. +.+|..+..+++|++|++++|.+++. ..+..+++|++|++++|++++.+|.. +..+++|++|
T Consensus 24 ~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~-~~~l~~L~~L 100 (168)
T 2ell_A 24 AAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDML-AEKLPNLTHL 100 (168)
T ss_dssp TSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHH-HHHCTTCCEE
T ss_pred ccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHH-HhhCCCCCEE
Confidence 56777777777776 55666677777777777777777655 66677777777777777777445443 3557777777
Q ss_pred ECCCCcCcccC-CcCCCCCCCCCeeecccCcccccCc---ccccccCCCCceeccccccc
Q 039514 156 FLDKNMFHGKI-PSALSKCKQLQQLNLQLNNLSGAIP---KEIGNLTMLKGISLLYNKLQ 211 (790)
Q Consensus 156 ~L~~N~i~~~~-p~~~~~l~~L~~L~L~~N~l~~~~~---~~~~~l~~L~~L~l~~n~l~ 211 (790)
+|++|.+++.. +..+..+++|++|++++|.+++..+ ..+..+++|++|+++.|.+.
T Consensus 101 ~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~ 160 (168)
T 2ell_A 101 NLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQ 160 (168)
T ss_dssp ECBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSC
T ss_pred eccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChh
Confidence 77777777542 2567777777777777777775544 35666666666666655544
No 130
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.64 E-value=2.4e-16 Score=148.38 Aligned_cols=133 Identities=20% Similarity=0.215 Sum_probs=120.8
Q ss_pred CcEEEEECCCCCcc-eeccccCCCCCCCCEEECCCCCCcccCChhhhCCCCCCEEeCCCCCCcccCCccccCCCCCcEEE
Q 039514 53 HRVTALDTSQFNLQ-GTIPSQLGNLSSLTILNLSHNKLSGSVPSSIYTMHTLKFLDFTDNQLSGSVSSFVFNMSSIVDIR 131 (790)
Q Consensus 53 ~~v~~Ldl~~~~l~-~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 131 (790)
.+++.|+++++.++ +.+|..+..+++|++|++++|.+++. ..|..+++|++|+|++|++++.+|..+.++++|++|+
T Consensus 24 ~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 101 (168)
T 2ell_A 24 AAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLN 101 (168)
T ss_dssp TSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEE
T ss_pred ccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEe
Confidence 46889999999998 78899999999999999999999976 7899999999999999999988899999999999999
Q ss_pred ccCccCcccCch-hhhccCCCCCEEECCCCcCcccCC---cCCCCCCCCCeeecccCcccc
Q 039514 132 LTNNRLSGELPK-NICNYLPHLKALFLDKNMFHGKIP---SALSKCKQLQQLNLQLNNLSG 188 (790)
Q Consensus 132 L~~N~l~~~lp~-~~~~~l~~L~~L~L~~N~i~~~~p---~~~~~l~~L~~L~L~~N~l~~ 188 (790)
+++|.++ .+|. ..+..+++|++|++++|.+++..+ ..|..+++|++|++++|.+..
T Consensus 102 Ls~N~l~-~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~~ 161 (168)
T 2ell_A 102 LSGNKLK-DISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQE 161 (168)
T ss_dssp CBSSSCC-SSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSCB
T ss_pred ccCCccC-cchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChhh
Confidence 9999998 5653 455889999999999999997766 589999999999999999874
No 131
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.63 E-value=2.3e-15 Score=144.81 Aligned_cols=127 Identities=24% Similarity=0.328 Sum_probs=110.0
Q ss_pred EEECCCCCcceeccccCCCCCCCCEEECCCCCCcccCChhhhCCCCCCEEeCCCCCCcccCCccccCCCCCcEEEccCcc
Q 039514 57 ALDTSQFNLQGTIPSQLGNLSSLTILNLSHNKLSGSVPSSIYTMHTLKFLDFTDNQLSGSVSSFVFNMSSIVDIRLTNNR 136 (790)
Q Consensus 57 ~Ldl~~~~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~ 136 (790)
.++++++.++ .+|..+. ++|++|+|++|.|+ .+|..|..+++|++|+|++|+|++..+..|.++++|++|+|++|+
T Consensus 14 ~l~~~~~~l~-~ip~~~~--~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~ 89 (193)
T 2wfh_A 14 VVRCSNKGLK-VLPKGIP--RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNR 89 (193)
T ss_dssp EEECTTSCCS-SCCSCCC--TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEEcCCCCCC-cCCCCCC--CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCc
Confidence 4677778877 4676664 58999999999998 566899999999999999999999888899999999999999999
Q ss_pred CcccCchhhhccCCCCCEEECCCCcCcccCCcCCCCCCCCCeeecccCcccc
Q 039514 137 LSGELPKNICNYLPHLKALFLDKNMFHGKIPSALSKCKQLQQLNLQLNNLSG 188 (790)
Q Consensus 137 l~~~lp~~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~ 188 (790)
++ .+|...|..+++|++|+|++|.++...+..|..+++|++|+|++|.+..
T Consensus 90 l~-~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C 140 (193)
T 2wfh_A 90 LR-CIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYC 140 (193)
T ss_dssp CC-BCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred cC-EeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeec
Confidence 98 6777677889999999999999998777789999999999999998864
No 132
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.62 E-value=6.7e-16 Score=142.13 Aligned_cols=127 Identities=20% Similarity=0.241 Sum_probs=83.6
Q ss_pred CCCCEEECCCCCCc-ccCChhhhCCCCCCEEeCCCCCCcccCCccccCCCCCcEEEccCccCcccCchhhhccCCCCCEE
Q 039514 77 SSLTILNLSHNKLS-GSVPSSIYTMHTLKFLDFTDNQLSGSVSSFVFNMSSIVDIRLTNNRLSGELPKNICNYLPHLKAL 155 (790)
Q Consensus 77 ~~L~~L~Ls~N~i~-~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~lp~~~~~~l~~L~~L 155 (790)
++|++|++++|.++ +..|..+..+++|++|++++|++++. ..+.++++|++|++++|.+++.+|.. +..+++|++|
T Consensus 17 ~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~-~~~l~~L~~L 93 (149)
T 2je0_A 17 SDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVL-AEKCPNLTHL 93 (149)
T ss_dssp GGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHH-HHHCTTCCEE
T ss_pred ccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHH-hhhCCCCCEE
Confidence 45666677776666 55566666666777777777766655 55666677777777777776445543 3557777777
Q ss_pred ECCCCcCccc-CCcCCCCCCCCCeeecccCcccccCc---ccccccCCCCceecc
Q 039514 156 FLDKNMFHGK-IPSALSKCKQLQQLNLQLNNLSGAIP---KEIGNLTMLKGISLL 206 (790)
Q Consensus 156 ~L~~N~i~~~-~p~~~~~l~~L~~L~L~~N~l~~~~~---~~~~~l~~L~~L~l~ 206 (790)
++++|.+++. .+..+..+++|++|++++|.+++..+ ..+..+++|+.|+++
T Consensus 94 ~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~ 148 (149)
T 2je0_A 94 NLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGY 148 (149)
T ss_dssp ECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTB
T ss_pred ECCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCC
Confidence 7777777753 33667777777777777777776554 456666666666553
No 133
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=99.62 E-value=5.3e-16 Score=159.94 Aligned_cols=91 Identities=21% Similarity=0.399 Sum_probs=77.5
Q ss_pred cCccccceeccCCcEEEEEEEEc------CCcEEEEEEecccch-HHHHHHHHHHHHHhcCCCCceeeEeeEEEeCCeEE
Q 039514 698 DNFAENNIIGRGGFGSVYGARLE------DGMKIAIKVFHQQCA-SALKSFEAECEVLKKIRHRNLIKVISSCSNDDFKA 770 (790)
Q Consensus 698 ~~~~~~~~ig~g~~g~v~~~~~~------~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~~~h~nlv~l~~~~~~~~~~~ 770 (790)
.+++..+.||+|+||.||+|++. +++.||||+++.... ...++|.+|+.+|++++|||||+++|+|.+++..+
T Consensus 26 ~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~ 105 (308)
T 4gt4_A 26 SAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLS 105 (308)
T ss_dssp GGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCE
T ss_pred HHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEEE
Confidence 34566788999999999999862 467899999975432 33578999999999999999999999999999999
Q ss_pred EEEecCCCCCHHHHHhcC
Q 039514 771 LVLEYMSNGSLGDWLHSS 788 (790)
Q Consensus 771 lv~e~~~~G~L~~~l~~~ 788 (790)
+|||||++|||.++|+.+
T Consensus 106 lV~Ey~~~G~L~~~L~~~ 123 (308)
T 4gt4_A 106 MIFSYCSHGDLHEFLVMR 123 (308)
T ss_dssp EEEECCSSCBHHHHHHTT
T ss_pred EEEEcCCCCcHHHHHHhh
Confidence 999999999999999754
No 134
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.62 E-value=5.8e-16 Score=142.53 Aligned_cols=128 Identities=19% Similarity=0.231 Sum_probs=115.4
Q ss_pred CcEEEEECCCCCcc-eeccccCCCCCCCCEEECCCCCCcccCChhhhCCCCCCEEeCCCCCCcccCCccccCCCCCcEEE
Q 039514 53 HRVTALDTSQFNLQ-GTIPSQLGNLSSLTILNLSHNKLSGSVPSSIYTMHTLKFLDFTDNQLSGSVSSFVFNMSSIVDIR 131 (790)
Q Consensus 53 ~~v~~Ldl~~~~l~-~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 131 (790)
.+++.|+++++.++ +.+|..+..+++|++|++++|.+++. ..|..+++|++|++++|++++.+|..+.++++|++|+
T Consensus 17 ~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ 94 (149)
T 2je0_A 17 SDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLN 94 (149)
T ss_dssp GGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEE
T ss_pred ccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEE
Confidence 46889999999998 78899999999999999999999977 7899999999999999999988899999999999999
Q ss_pred ccCccCcccCch-hhhccCCCCCEEECCCCcCcccCC---cCCCCCCCCCeeeccc
Q 039514 132 LTNNRLSGELPK-NICNYLPHLKALFLDKNMFHGKIP---SALSKCKQLQQLNLQL 183 (790)
Q Consensus 132 L~~N~l~~~lp~-~~~~~l~~L~~L~L~~N~i~~~~p---~~~~~l~~L~~L~L~~ 183 (790)
+++|.++ .+|. ..+..+++|++|++++|.+++..+ ..+..+++|++|++++
T Consensus 95 ls~N~i~-~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~d 149 (149)
T 2je0_A 95 LSGNKIK-DLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGYD 149 (149)
T ss_dssp CTTSCCC-SHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTBC
T ss_pred CCCCcCC-ChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCCC
Confidence 9999998 4442 445789999999999999998776 5799999999999864
No 135
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.62 E-value=2.9e-14 Score=153.21 Aligned_cols=264 Identities=16% Similarity=0.188 Sum_probs=155.8
Q ss_pred CCCCCEEECCCCCCcccCChhhhCCCCCCEEeCCCCCCcccCCccccCCCCCcEEEccCccCcccCchhhhccCCCCCEE
Q 039514 76 LSSLTILNLSHNKLSGSVPSSIYTMHTLKFLDFTDNQLSGSVSSFVFNMSSIVDIRLTNNRLSGELPKNICNYLPHLKAL 155 (790)
Q Consensus 76 l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~lp~~~~~~l~~L~~L 155 (790)
...++.+.+.. .++.+...+|.+. +|+.+++..+ ++.+...+|.+. +|+.+.+.. .++ .|+...|.++++|+.+
T Consensus 112 ~~~l~~i~ip~-~i~~I~~~aF~~~-~L~~i~l~~~-i~~I~~~aF~~~-~L~~i~lp~-~l~-~I~~~aF~~c~~L~~l 185 (401)
T 4fdw_A 112 LKGYNEIILPN-SVKSIPKDAFRNS-QIAKVVLNEG-LKSIGDMAFFNS-TVQEIVFPS-TLE-QLKEDIFYYCYNLKKA 185 (401)
T ss_dssp CSSCSEEECCT-TCCEECTTTTTTC-CCSEEECCTT-CCEECTTTTTTC-CCCEEECCT-TCC-EECSSTTTTCTTCCEE
T ss_pred cCCccEEEECC-ccCEehHhhcccC-CccEEEeCCC-ccEECHHhcCCC-CceEEEeCC-Ccc-EehHHHhhCcccCCee
Confidence 35666666653 4666666777764 6777777665 666666667663 577777764 555 6666777777777777
Q ss_pred ECCCCcCcccCCcCCCCCCCCCeeecccCcccccCcccccccCCCCceecccccccceEEcccccCccccCccccCCCCC
Q 039514 156 FLDKNMFHGKIPSALSKCKQLQQLNLQLNNLSGAIPKEIGNLTMLKGISLLYNKLQEALVLGMNNLVGVLPATIFNMSTL 235 (790)
Q Consensus 156 ~L~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~l~l~~n~l~~~~p~~~~~l~~L 235 (790)
+|+.|.++.+...+|. ..+|+.+.+..+ ++.+...+|.++++|+.+++..+ ++.+-..+|.+ .+|
T Consensus 186 ~l~~n~l~~I~~~aF~-~~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~~~------------l~~I~~~aF~~-~~L 250 (401)
T 4fdw_A 186 DLSKTKITKLPASTFV-YAGIEEVLLPVT-LKEIGSQAFLKTSQLKTIEIPEN------------VSTIGQEAFRE-SGI 250 (401)
T ss_dssp ECTTSCCSEECTTTTT-TCCCSEEECCTT-CCEECTTTTTTCTTCCCEECCTT------------CCEECTTTTTT-CCC
T ss_pred ecCCCcceEechhhEe-ecccCEEEeCCc-hheehhhHhhCCCCCCEEecCCC------------ccCcccccccc-CCc
Confidence 7777777766666666 467777777633 66666677777777777665432 22233444555 567
Q ss_pred cEEEcccCCCcccCCcchhcCCCCcceEeecCCccc-----ccCCccccCCCCCCEEeccCCcccccCcccccCCCCCcc
Q 039514 236 KVLILINNSLSGSLPSRIDLSLPTVEVLILALNRFF-----GTIPSSITNASKLTVLELGGNTFSGLIPDTIGNLRNLEW 310 (790)
Q Consensus 236 ~~L~L~~n~l~~~~p~~~~~~l~~L~~L~L~~n~~~-----~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~ 310 (790)
+.+.+. +.++ .++...+..+++|+.+.+..+.+. ...+..|.++++|+.+++. +.++.+...+|.++++|+.
T Consensus 251 ~~i~lp-~~i~-~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~-~~i~~I~~~aF~~c~~L~~ 327 (401)
T 4fdw_A 251 TTVKLP-NGVT-NIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIP-ESIRILGQGLLGGNRKVTQ 327 (401)
T ss_dssp SEEEEE-TTCC-EECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCC-TTCCEECTTTTTTCCSCCE
T ss_pred cEEEeC-CCcc-EEChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeC-CceEEEhhhhhcCCCCccE
Confidence 777773 3343 445555555566666665555443 3344556666666666666 3355555566666666666
Q ss_pred ccccCCcccCCCCcccccccCCCCCCCCEEEccCCCCcccCCchhhhhcccCcEEEeecC
Q 039514 311 LNLSKNSLTSSTSKLSFLSSLANCKKLRSLKLAGNPLDGFLPSSIGNLSKSLETLVIANC 370 (790)
Q Consensus 311 L~Ls~n~l~~~~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~~L~~L~l~~n 370 (790)
+.|..+ ++.+.. .+|.++ +|+.+++++|.+....+..|..++..++.|.+..+
T Consensus 328 l~lp~~-l~~I~~-----~aF~~~-~L~~l~l~~n~~~~l~~~~F~~~~~~l~~l~vp~~ 380 (401)
T 4fdw_A 328 LTIPAN-VTQINF-----SAFNNT-GIKEVKVEGTTPPQVFEKVWYGFPDDITVIRVPAE 380 (401)
T ss_dssp EEECTT-CCEECT-----TSSSSS-CCCEEEECCSSCCBCCCSSCCCSCTTCCEEEECGG
T ss_pred EEECcc-ccEEcH-----HhCCCC-CCCEEEEcCCCCcccccccccCCCCCccEEEeCHH
Confidence 666443 333322 245555 56666666665544333333333334444444443
No 136
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.61 E-value=2.7e-15 Score=142.50 Aligned_cols=134 Identities=21% Similarity=0.195 Sum_probs=108.4
Q ss_pred CCeeeccCCccccccCcccccCCCCceEeccCCcccccccccccccccCceEeCcCCcccccCcccccCCcccCeeeCCC
Q 039514 458 LRYLYLGSNRFTFVIPSTFWSLKDILFFDFSSNFLVGTLSFDIGNLKVLLGINLSENNLSGDMPATIGGLKDLQFMDLAY 537 (790)
Q Consensus 458 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 537 (790)
.+.+++++|+++.++ ..+ .++++.|++++|.+++..+..+..+++|++|++++|++++..+..|.++++|++|++++
T Consensus 9 ~~~l~~~~~~l~~~p-~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 85 (177)
T 2o6r_A 9 GTEIRCNSKGLTSVP-TGI--PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHE 85 (177)
T ss_dssp TTEEECCSSCCSSCC-TTC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEecCCCCccCC-CCC--CCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCC
Confidence 355666666666443 222 25677788888887777777778888899999999999877777888999999999999
Q ss_pred CcccccCCccccCCCCCCEEECCCCcCcccCCccccccCCCCeEeCCCCcceecCCC
Q 039514 538 NRLEGPIPESFGDLTSLEVLNLSKNKISGSIPKSMEKLFYLRELNLSFNELEGEIPS 594 (790)
Q Consensus 538 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~ 594 (790)
|++++..+..|..+++|++|++++|++++..+..+..+++|++|++++|++.+.+|.
T Consensus 86 N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~ 142 (177)
T 2o6r_A 86 NKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 142 (177)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHHH
T ss_pred CCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccCcc
Confidence 999988888889999999999999999977676778899999999999999887663
No 137
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=99.61 E-value=1.1e-15 Score=159.23 Aligned_cols=91 Identities=22% Similarity=0.384 Sum_probs=76.2
Q ss_pred cCccccceeccCCcEEEEEEE-EcCCcEEEEEEecccc--hHHHHHHHHHHHHHhcCCCCceeeEeeEEEeCCeEEEEEe
Q 039514 698 DNFAENNIIGRGGFGSVYGAR-LEDGMKIAIKVFHQQC--ASALKSFEAECEVLKKIRHRNLIKVISSCSNDDFKALVLE 774 (790)
Q Consensus 698 ~~~~~~~~ig~g~~g~v~~~~-~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~~~h~nlv~l~~~~~~~~~~~lv~e 774 (790)
++|+..+.||+|+||.||+|+ ..+|+.||||++.... ....+.+.+|+++|++++|||||++++++.+++..|+|||
T Consensus 24 e~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVmE 103 (350)
T 4b9d_A 24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMD 103 (350)
T ss_dssp CCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred cceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEe
Confidence 679999999999999999999 5679999999997543 3345679999999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhcC
Q 039514 775 YMSNGSLGDWLHSS 788 (790)
Q Consensus 775 ~~~~G~L~~~l~~~ 788 (790)
||++|+|.++|+.+
T Consensus 104 y~~gg~L~~~i~~~ 117 (350)
T 4b9d_A 104 YCEGGDLFKRINAQ 117 (350)
T ss_dssp CCTTCBHHHHHHHT
T ss_pred CCCCCcHHHHHHHc
Confidence 99999999999754
No 138
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=99.59 E-value=9.5e-16 Score=159.35 Aligned_cols=92 Identities=21% Similarity=0.285 Sum_probs=82.1
Q ss_pred hcCccccceeccCCcEEEEEEE-EcCCcEEEEEEecccchHHHHHHHHHHHHHhcCCCCceeeEeeEEEeCCeEEEEEec
Q 039514 697 TDNFAENNIIGRGGFGSVYGAR-LEDGMKIAIKVFHQQCASALKSFEAECEVLKKIRHRNLIKVISSCSNDDFKALVLEY 775 (790)
Q Consensus 697 ~~~~~~~~~ig~g~~g~v~~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~~~h~nlv~l~~~~~~~~~~~lv~e~ 775 (790)
...|+..+.||+|+||.||+|. ..+|+.||||++........+.+.+|+.+|++++|||||++++++.+++..||||||
T Consensus 73 ~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy 152 (346)
T 4fih_A 73 RSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEF 152 (346)
T ss_dssp GGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECC
T ss_pred hHhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeC
Confidence 3568889999999999999999 567999999999765444456688999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhcC
Q 039514 776 MSNGSLGDWLHSS 788 (790)
Q Consensus 776 ~~~G~L~~~l~~~ 788 (790)
|++|+|.++++..
T Consensus 153 ~~gg~L~~~l~~~ 165 (346)
T 4fih_A 153 LEGGALTDIVTHT 165 (346)
T ss_dssp CTTEEHHHHHHHS
T ss_pred CCCCcHHHHHHcC
Confidence 9999999998753
No 139
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=99.58 E-value=1.8e-15 Score=154.73 Aligned_cols=91 Identities=24% Similarity=0.425 Sum_probs=81.7
Q ss_pred cCccccceeccCCcEEEEEEE-EcCCcEEEEEEecccch---HHHHHHHHHHHHHhcCCCCceeeEeeEEEeCCeEEEEE
Q 039514 698 DNFAENNIIGRGGFGSVYGAR-LEDGMKIAIKVFHQQCA---SALKSFEAECEVLKKIRHRNLIKVISSCSNDDFKALVL 773 (790)
Q Consensus 698 ~~~~~~~~ig~g~~g~v~~~~-~~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~~~h~nlv~l~~~~~~~~~~~lv~ 773 (790)
++|+..+.||+|+||.||+|+ ..+|+.||||.+.+... ...+.+.+|+++|++++|||||++++++.+++..|+||
T Consensus 32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivm 111 (311)
T 4aw0_A 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL 111 (311)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 569999999999999999999 67899999999976432 23467899999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhcC
Q 039514 774 EYMSNGSLGDWLHSS 788 (790)
Q Consensus 774 e~~~~G~L~~~l~~~ 788 (790)
|||++|+|.+++++.
T Consensus 112 Ey~~gG~L~~~i~~~ 126 (311)
T 4aw0_A 112 SYAKNGELLKYIRKI 126 (311)
T ss_dssp CCCTTEEHHHHHHHH
T ss_pred ecCCCCCHHHHHHHc
Confidence 999999999999764
No 140
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.58 E-value=2.6e-15 Score=142.39 Aligned_cols=134 Identities=20% Similarity=0.233 Sum_probs=99.0
Q ss_pred cCCCCCCCCEEECCCCCCcccCChhhhCCCCCCEEeCCCCCCcccCCccccCCCCCcEEEccCccCcccCchhhhccCCC
Q 039514 72 QLGNLSSLTILNLSHNKLSGSVPSSIYTMHTLKFLDFTDNQLSGSVSSFVFNMSSIVDIRLTNNRLSGELPKNICNYLPH 151 (790)
Q Consensus 72 ~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~lp~~~~~~l~~ 151 (790)
.+..+++|++|++++|.++.+ +......++|++|++++|++++. ..|.++++|++|++++|.++ .+|..++..+++
T Consensus 14 ~~~~~~~L~~L~l~~n~l~~i-~~~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~-~~~~~~~~~l~~ 89 (176)
T 1a9n_A 14 QYTNAVRDRELDLRGYKIPVI-ENLGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRIC-RIGEGLDQALPD 89 (176)
T ss_dssp EEECTTSCEEEECTTSCCCSC-CCGGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCC-EECSCHHHHCTT
T ss_pred hcCCcCCceEEEeeCCCCchh-HHhhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCccc-ccCcchhhcCCC
Confidence 456677888888888888754 44333334888888888888865 57788888888888888887 677777677888
Q ss_pred CCEEECCCCcCcccCCc--CCCCCCCCCeeecccCcccccCcc----cccccCCCCceeccccccc
Q 039514 152 LKALFLDKNMFHGKIPS--ALSKCKQLQQLNLQLNNLSGAIPK----EIGNLTMLKGISLLYNKLQ 211 (790)
Q Consensus 152 L~~L~L~~N~i~~~~p~--~~~~l~~L~~L~L~~N~l~~~~~~----~~~~l~~L~~L~l~~n~l~ 211 (790)
|++|+|++|.++. +|. .+..+++|++|++++|.++. .|. .+..+++|+.|+++.|.+.
T Consensus 90 L~~L~L~~N~i~~-~~~~~~l~~l~~L~~L~l~~N~i~~-~~~~~~~~~~~l~~L~~Ld~~~n~~~ 153 (176)
T 1a9n_A 90 LTELILTNNSLVE-LGDLDPLASLKSLTYLCILRNPVTN-KKHYRLYVIYKVPQVRVLDFQKVKLK 153 (176)
T ss_dssp CCEEECCSCCCCC-GGGGGGGGGCTTCCEEECCSSGGGG-STTHHHHHHHHCTTCSEETTEECCHH
T ss_pred CCEEECCCCcCCc-chhhHhhhcCCCCCEEEecCCCCCC-cHhHHHHHHHHCCccceeCCCcCCHH
Confidence 8888888888864 443 67788888888888888874 344 3667777777776666554
No 141
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.58 E-value=4.7e-14 Score=151.57 Aligned_cols=219 Identities=11% Similarity=0.109 Sum_probs=138.5
Q ss_pred cCcEEEeecCcCcccCchhhhccCCcceeeeccccccCccccccccccccCeEEeeccccCccCCccccccccccceecc
Q 039514 361 SLETLVIANCSISGNIPQAISNLSNLLTLVLERNKLTGPISITFGRLQKLQGLYLASNNLVGSFPDELCHIGRLAELALL 440 (790)
Q Consensus 361 ~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~ 440 (790)
+|+.+.+.. .+..+.+.+|.++++|+.+++.+|.++.+...+|. ..+|+.+.+..+ +......+|.++++|+.+.+.
T Consensus 158 ~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l~~n~l~~I~~~aF~-~~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~ 234 (401)
T 4fdw_A 158 TVQEIVFPS-TLEQLKEDIFYYCYNLKKADLSKTKITKLPASTFV-YAGIEEVLLPVT-LKEIGSQAFLKTSQLKTIEIP 234 (401)
T ss_dssp CCCEEECCT-TCCEECSSTTTTCTTCCEEECTTSCCSEECTTTTT-TCCCSEEECCTT-CCEECTTTTTTCTTCCCEECC
T ss_pred CceEEEeCC-CccEehHHHhhCcccCCeeecCCCcceEechhhEe-ecccCEEEeCCc-hheehhhHhhCCCCCCEEecC
Confidence 456666554 44445556666777777777777766666666665 366777766633 554555566666666666665
Q ss_pred cCcccccCCccccCCCCCCeeeccCCccccccCcccccCCCCceEeccCCccc-----ccccccccccccCceEeCcCCc
Q 039514 441 DNRHSGSIPSCVSNLTSLRYLYLGSNRFTFVIPSTFWSLKDILFFDFSSNFLV-----GTLSFDIGNLKVLLGINLSENN 515 (790)
Q Consensus 441 ~n~~~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~-----~~~~~~~~~l~~L~~L~Ls~N~ 515 (790)
++ +...-..+|.+ .+|+.+.+ .+.++.+.+.+|.++++|+.+++.+|.+. ......|.++++|+.++|. +.
T Consensus 235 ~~-l~~I~~~aF~~-~~L~~i~l-p~~i~~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~-~~ 310 (401)
T 4fdw_A 235 EN-VSTIGQEAFRE-SGITTVKL-PNGVTNIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIP-ES 310 (401)
T ss_dssp TT-CCEECTTTTTT-CCCSEEEE-ETTCCEECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCC-TT
T ss_pred CC-ccCcccccccc-CCccEEEe-CCCccEEChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeC-Cc
Confidence 53 33334445555 56777777 34466566667777777777777666554 3445566777777777776 34
Q ss_pred ccccCcccccCCcccCeeeCCCCcccccCCccccCCCCCCEEECCCCcCcccCCccccccC-CCCeEeCCCCcc
Q 039514 516 LSGDMPATIGGLKDLQFMDLAYNRLEGPIPESFGDLTSLEVLNLSKNKISGSIPKSMEKLF-YLRELNLSFNEL 588 (790)
Q Consensus 516 l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~-~L~~L~Ls~N~l 588 (790)
++.+...+|.++++|+.++|..| ++.+.+.+|.++ +|+.+++++|.+....+..|.+++ .++.|.+..+.+
T Consensus 311 i~~I~~~aF~~c~~L~~l~lp~~-l~~I~~~aF~~~-~L~~l~l~~n~~~~l~~~~F~~~~~~l~~l~vp~~~~ 382 (401)
T 4fdw_A 311 IRILGQGLLGGNRKVTQLTIPAN-VTQINFSAFNNT-GIKEVKVEGTTPPQVFEKVWYGFPDDITVIRVPAESV 382 (401)
T ss_dssp CCEECTTTTTTCCSCCEEEECTT-CCEECTTSSSSS-CCCEEEECCSSCCBCCCSSCCCSCTTCCEEEECGGGH
T ss_pred eEEEhhhhhcCCCCccEEEECcc-ccEEcHHhCCCC-CCCEEEEcCCCCcccccccccCCCCCccEEEeCHHHH
Confidence 66666667777777777777544 555666677777 777777777776665566666663 566666665554
No 142
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=99.57 E-value=2.2e-15 Score=160.61 Aligned_cols=92 Identities=21% Similarity=0.285 Sum_probs=82.4
Q ss_pred hcCccccceeccCCcEEEEEEE-EcCCcEEEEEEecccchHHHHHHHHHHHHHhcCCCCceeeEeeEEEeCCeEEEEEec
Q 039514 697 TDNFAENNIIGRGGFGSVYGAR-LEDGMKIAIKVFHQQCASALKSFEAECEVLKKIRHRNLIKVISSCSNDDFKALVLEY 775 (790)
Q Consensus 697 ~~~~~~~~~ig~g~~g~v~~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~~~h~nlv~l~~~~~~~~~~~lv~e~ 775 (790)
...|+..+.||+|+||.||+|. ..+|+.||||++........+.+.+|+.+|++++|||||++++++.+++.+||||||
T Consensus 150 ~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy 229 (423)
T 4fie_A 150 RSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEF 229 (423)
T ss_dssp GGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred hHhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeC
Confidence 4679999999999999999999 567999999999765444456688999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhcC
Q 039514 776 MSNGSLGDWLHSS 788 (790)
Q Consensus 776 ~~~G~L~~~l~~~ 788 (790)
|++|+|.++++..
T Consensus 230 ~~gG~L~~~i~~~ 242 (423)
T 4fie_A 230 LEGGALTDIVTHT 242 (423)
T ss_dssp CTTEEHHHHHHHS
T ss_pred CCCCcHHHHHhcc
Confidence 9999999998753
No 143
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=99.53 E-value=1.7e-14 Score=146.93 Aligned_cols=88 Identities=28% Similarity=0.441 Sum_probs=75.3
Q ss_pred cccceeccCCcEEEEEEE-EcCCcEEEEEEecccc--hHHHHHHHHHHHHHhcCCCCceeeEeeEEEe----CCeEEEEE
Q 039514 701 AENNIIGRGGFGSVYGAR-LEDGMKIAIKVFHQQC--ASALKSFEAECEVLKKIRHRNLIKVISSCSN----DDFKALVL 773 (790)
Q Consensus 701 ~~~~~ig~g~~g~v~~~~-~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~~~h~nlv~l~~~~~~----~~~~~lv~ 773 (790)
...+.||+|+||.||+|. ..+++.||||.+.... ....+.|.+|+++|++++|||||++++++.+ ++.+|+||
T Consensus 29 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvm 108 (290)
T 3fpq_A 29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT 108 (290)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEE
Confidence 556789999999999999 5678999999997543 3345679999999999999999999999865 35689999
Q ss_pred ecCCCCCHHHHHhcC
Q 039514 774 EYMSNGSLGDWLHSS 788 (790)
Q Consensus 774 e~~~~G~L~~~l~~~ 788 (790)
|||++|+|.+++++.
T Consensus 109 Ey~~gg~L~~~l~~~ 123 (290)
T 3fpq_A 109 ELMTSGTLKTYLKRF 123 (290)
T ss_dssp ECCCSCBHHHHHHHH
T ss_pred eCCCCCCHHHHHHhc
Confidence 999999999999764
No 144
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=99.53 E-value=1.8e-14 Score=148.03 Aligned_cols=91 Identities=23% Similarity=0.455 Sum_probs=76.7
Q ss_pred cCccccceeccCCcEEEEEEE-EcCCcEEEEEEecccch-HHHHHHHHHHHHHhcCCCCceeeEeeEEEeCC--------
Q 039514 698 DNFAENNIIGRGGFGSVYGAR-LEDGMKIAIKVFHQQCA-SALKSFEAECEVLKKIRHRNLIKVISSCSNDD-------- 767 (790)
Q Consensus 698 ~~~~~~~~ig~g~~g~v~~~~-~~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~~~h~nlv~l~~~~~~~~-------- 767 (790)
.+|+..+.||+|+||.||+|+ ..+|+.||||.++.... ...+.+.+|+++|++++|||||++++++.+.+
T Consensus 5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~ 84 (299)
T 4g31_A 5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPS 84 (299)
T ss_dssp HHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC--------
T ss_pred hhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCcccccccc
Confidence 458899999999999999999 56799999999975433 34567899999999999999999999987543
Q ss_pred ----eEEEEEecCCCCCHHHHHhcC
Q 039514 768 ----FKALVLEYMSNGSLGDWLHSS 788 (790)
Q Consensus 768 ----~~~lv~e~~~~G~L~~~l~~~ 788 (790)
.+|+|||||++|+|.++++.+
T Consensus 85 ~~~~~l~ivmE~~~gg~L~~~l~~~ 109 (299)
T 4g31_A 85 SPKVYLYIQMQLCRKENLKDWMNGR 109 (299)
T ss_dssp --CEEEEEEEECCCSCCHHHHHHTC
T ss_pred CCCcEEEEEEecCCCCcHHHHHHhc
Confidence 479999999999999999865
No 145
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.53 E-value=1.5e-14 Score=137.05 Aligned_cols=135 Identities=20% Similarity=0.157 Sum_probs=109.8
Q ss_pred cccCCCCCCeeeccCCccccccCcccccCCCCceEeccCCcccccccccccccccCceEeCcCCcccccCcccccCCccc
Q 039514 451 CVSNLTSLRYLYLGSNRFTFVIPSTFWSLKDILFFDFSSNFLVGTLSFDIGNLKVLLGINLSENNLSGDMPATIGGLKDL 530 (790)
Q Consensus 451 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 530 (790)
.+..+++|+.|++++|+++.+ |......++|++|++++|.+++. ..+..++.|++|++++|+|++..+..|..+++|
T Consensus 14 ~~~~~~~L~~L~l~~n~l~~i-~~~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 90 (176)
T 1a9n_A 14 QYTNAVRDRELDLRGYKIPVI-ENLGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDL 90 (176)
T ss_dssp EEECTTSCEEEECTTSCCCSC-CCGGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTC
T ss_pred hcCCcCCceEEEeeCCCCchh-HHhhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCC
Confidence 455677888888888888754 44333334888888888888875 578889999999999999997766777899999
Q ss_pred CeeeCCCCcccccCCc--cccCCCCCCEEECCCCcCcccCCcc----ccccCCCCeEeCCCCccee
Q 039514 531 QFMDLAYNRLEGPIPE--SFGDLTSLEVLNLSKNKISGSIPKS----MEKLFYLRELNLSFNELEG 590 (790)
Q Consensus 531 ~~L~Ls~N~l~~~~p~--~~~~l~~L~~L~L~~N~l~~~~p~~----~~~l~~L~~L~Ls~N~l~~ 590 (790)
++|++++|+++. +|. .+..+++|+.|++++|.++ .+|.. +..+++|+.||+++|....
T Consensus 91 ~~L~L~~N~i~~-~~~~~~l~~l~~L~~L~l~~N~i~-~~~~~~~~~~~~l~~L~~Ld~~~n~~~~ 154 (176)
T 1a9n_A 91 TELILTNNSLVE-LGDLDPLASLKSLTYLCILRNPVT-NKKHYRLYVIYKVPQVRVLDFQKVKLKE 154 (176)
T ss_dssp CEEECCSCCCCC-GGGGGGGGGCTTCCEEECCSSGGG-GSTTHHHHHHHHCTTCSEETTEECCHHH
T ss_pred CEEECCCCcCCc-chhhHhhhcCCCCCEEEecCCCCC-CcHhHHHHHHHHCCccceeCCCcCCHHH
Confidence 999999999974 454 7889999999999999998 45664 8899999999999998764
No 146
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=99.52 E-value=2.5e-14 Score=146.74 Aligned_cols=89 Identities=27% Similarity=0.468 Sum_probs=75.9
Q ss_pred hcCccccceeccCCcEEEEEEEEcCCcEEEEEEeccc--chHHHHHHHHHHHHHhcCCCCceeeEeeEEEeCCeEEEEEe
Q 039514 697 TDNFAENNIIGRGGFGSVYGARLEDGMKIAIKVFHQQ--CASALKSFEAECEVLKKIRHRNLIKVISSCSNDDFKALVLE 774 (790)
Q Consensus 697 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~~~h~nlv~l~~~~~~~~~~~lv~e 774 (790)
.++|...+.||+|+||.||+|++. ..||||.++.. .....++|.+|+.+|++++|||||+++|+|.+ +..|+|||
T Consensus 35 ~~~l~l~~~iG~G~fG~Vy~~~~~--~~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~iVmE 111 (307)
T 3omv_A 35 ASEVMLSTRIGSGSFGTVYKGKWH--GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVTQ 111 (307)
T ss_dssp TTSCCEEEECCCCSSSEEEEEESS--SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEEE
T ss_pred HHHeEEeeEEeeCCCcEEEEEEEC--CcEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeEEEEEE
Confidence 356778899999999999999864 36999999743 23445789999999999999999999999865 56899999
Q ss_pred cCCCCCHHHHHhcC
Q 039514 775 YMSNGSLGDWLHSS 788 (790)
Q Consensus 775 ~~~~G~L~~~l~~~ 788 (790)
||++|+|.++|+..
T Consensus 112 y~~gGsL~~~l~~~ 125 (307)
T 3omv_A 112 WCEGSSLYKHLHVQ 125 (307)
T ss_dssp CCSSCBHHHHHHTS
T ss_pred cCCCCCHHHHHhhc
Confidence 99999999999764
No 147
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=99.51 E-value=2.6e-14 Score=147.73 Aligned_cols=89 Identities=29% Similarity=0.432 Sum_probs=73.1
Q ss_pred cCccccceeccCCcEEEEEEEEcCCcEEEEEEecccchHHHHHHHHHHHHHhcCCCCceeeEeeEEEeCC----eEEEEE
Q 039514 698 DNFAENNIIGRGGFGSVYGARLEDGMKIAIKVFHQQCASALKSFEAECEVLKKIRHRNLIKVISSCSNDD----FKALVL 773 (790)
Q Consensus 698 ~~~~~~~~ig~g~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~~~h~nlv~l~~~~~~~~----~~~lv~ 773 (790)
++|...+.||+|+||.||+|++ +|+.||||+++..... ...+.+|+..+.+++|||||+++|+|.+++ ..|+||
T Consensus 3 r~i~L~~~iG~G~fG~Vy~~~~-~g~~VAvK~l~~~~~~-~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~ 80 (303)
T 3hmm_A 3 RTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSREER-SWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVS 80 (303)
T ss_dssp GGEEEEEEEEECSSSEEEEEEE-TTEEEEEEEECGGGHH-HHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEE
T ss_pred cEEEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECccchh-hHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEe
Confidence 4577789999999999999987 5899999999765322 223445666677899999999999998753 689999
Q ss_pred ecCCCCCHHHHHhcC
Q 039514 774 EYMSNGSLGDWLHSS 788 (790)
Q Consensus 774 e~~~~G~L~~~l~~~ 788 (790)
|||++|+|.++|+..
T Consensus 81 Ey~~~gsL~~~l~~~ 95 (303)
T 3hmm_A 81 DYHEHGSLFDYLNRY 95 (303)
T ss_dssp ECCTTCBHHHHHHHC
T ss_pred cCCCCCcHHHHHHhC
Confidence 999999999999864
No 148
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=99.51 E-value=1.2e-14 Score=150.49 Aligned_cols=87 Identities=17% Similarity=0.331 Sum_probs=77.3
Q ss_pred hcCccccceeccCCcEEEEEEE-EcCCcEEEEEEecccchHHHHHHHHHHHHHhcCCCCceeeEeeEEEeCCeEEEEEec
Q 039514 697 TDNFAENNIIGRGGFGSVYGAR-LEDGMKIAIKVFHQQCASALKSFEAECEVLKKIRHRNLIKVISSCSNDDFKALVLEY 775 (790)
Q Consensus 697 ~~~~~~~~~ig~g~~g~v~~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~~~h~nlv~l~~~~~~~~~~~lv~e~ 775 (790)
.+.|...+.||+|+||.||+|+ ..+|+.||||+++.... ..+|+.+|++++|||||++++++.+++..|+||||
T Consensus 57 ~~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~-----~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy 131 (336)
T 4g3f_A 57 VHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF-----RVEELVACAGLSSPRIVPLYGAVREGPWVNIFMEL 131 (336)
T ss_dssp TTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC-----CTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEECC
T ss_pred hhheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh-----HHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEec
Confidence 3567788899999999999999 56799999999976432 24799999999999999999999999999999999
Q ss_pred CCCCCHHHHHhcC
Q 039514 776 MSNGSLGDWLHSS 788 (790)
Q Consensus 776 ~~~G~L~~~l~~~ 788 (790)
|++|+|.++|+..
T Consensus 132 ~~gg~L~~~l~~~ 144 (336)
T 4g3f_A 132 LEGGSLGQLIKQM 144 (336)
T ss_dssp CTTCBHHHHHHHH
T ss_pred cCCCcHHHHHHHc
Confidence 9999999999764
No 149
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.51 E-value=1.6e-12 Score=140.44 Aligned_cols=146 Identities=15% Similarity=0.097 Sum_probs=76.2
Q ss_pred hhhccCCcceeeeccccccCccccccccccccCeEEeeccccCccCCccccccccccceecccCcccccCCccccCCCCC
Q 039514 379 AISNLSNLLTLVLERNKLTGPISITFGRLQKLQGLYLASNNLVGSFPDELCHIGRLAELALLDNRHSGSIPSCVSNLTSL 458 (790)
Q Consensus 379 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L 458 (790)
.|..+..++.+.+..+.. .+....|..+..++.+....+.+ ....|..+.+|+.+.+.++ +...-..+|.++++|
T Consensus 248 ~f~~~~~l~~~~~~~~~~-~i~~~~F~~~~~l~~~~~~~~~i---~~~~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L 322 (394)
T 4fs7_A 248 VFYGCTDLESISIQNNKL-RIGGSLFYNCSGLKKVIYGSVIV---PEKTFYGCSSLTEVKLLDS-VKFIGEEAFESCTSL 322 (394)
T ss_dssp TTTTCSSCCEEEECCTTC-EECSCTTTTCTTCCEEEECSSEE---CTTTTTTCTTCCEEEECTT-CCEECTTTTTTCTTC
T ss_pred cccccccceeEEcCCCcc-eeeccccccccccceeccCceee---ccccccccccccccccccc-cceechhhhcCCCCC
Confidence 344444444444443322 12333444444444444433322 1223444455555555433 333334556666666
Q ss_pred CeeeccCCccccccCcccccCCCCceEeccCCcccccccccccccccCceEeCcCCcccccCcccccCCcccCee
Q 039514 459 RYLYLGSNRFTFVIPSTFWSLKDILFFDFSSNFLVGTLSFDIGNLKVLLGINLSENNLSGDMPATIGGLKDLQFM 533 (790)
Q Consensus 459 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 533 (790)
+.+++..+ ++.+...+|.++.+|+.+++..+ ++......|.++.+|+.+++..+ ++ .....|.++++|+.+
T Consensus 323 ~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~lp~~-~~-~~~~~F~~c~~L~~I 393 (394)
T 4fs7_A 323 VSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS-LRKIGANAFQGCINLKKVELPKR-LE-QYRYDFEDTTKFKWI 393 (394)
T ss_dssp CEECCCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTBTTCTTCCEEEEEGG-GG-GGGGGBCTTCEEEEE
T ss_pred CEEEeCCc-ccEEhHHhccCCCCCCEEEECcc-ccEehHHHhhCCCCCCEEEECCC-CE-EhhheecCCCCCcEE
Confidence 66666533 55555666666666766666655 55555666777777777777544 32 234567777777654
No 150
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=99.50 E-value=2.7e-14 Score=143.94 Aligned_cols=92 Identities=26% Similarity=0.431 Sum_probs=76.0
Q ss_pred hcCccccceeccCCcEEEEEEE-EcCCcEEEEEEecccch---HHHHHHHHHHHHHhcCCCCceeeEeeEEEeCCeEEEE
Q 039514 697 TDNFAENNIIGRGGFGSVYGAR-LEDGMKIAIKVFHQQCA---SALKSFEAECEVLKKIRHRNLIKVISSCSNDDFKALV 772 (790)
Q Consensus 697 ~~~~~~~~~ig~g~~g~v~~~~-~~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~~~h~nlv~l~~~~~~~~~~~lv 772 (790)
.++|+..+.||+|+||.||+|. ..+|+.||||.+++... ...+.+.+|+++|++++|||||++++++.+++..|+|
T Consensus 12 ig~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~iv 91 (275)
T 3hyh_A 12 IGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMV 91 (275)
T ss_dssp --CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred eeCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEE
Confidence 3689999999999999999999 67899999999975432 2245689999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHhcCC
Q 039514 773 LEYMSNGSLGDWLHSSN 789 (790)
Q Consensus 773 ~e~~~~G~L~~~l~~~~ 789 (790)
|||| +|+|.+++..++
T Consensus 92 mEy~-~g~L~~~l~~~~ 107 (275)
T 3hyh_A 92 IEYA-GNELFDYIVQRD 107 (275)
T ss_dssp EECC-CEEHHHHHHHSC
T ss_pred EeCC-CCCHHHHHHHcC
Confidence 9999 689999997653
No 151
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.48 E-value=7.4e-16 Score=149.28 Aligned_cols=132 Identities=17% Similarity=0.233 Sum_probs=93.2
Q ss_pred cccCCCCCCeeeccCCccccccCcccccCCCCceEeccCCcccccccccccccccCceEeCcCCcccccCcccccCCccc
Q 039514 451 CVSNLTSLRYLYLGSNRFTFVIPSTFWSLKDILFFDFSSNFLVGTLSFDIGNLKVLLGINLSENNLSGDMPATIGGLKDL 530 (790)
Q Consensus 451 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 530 (790)
.+..+++|++|++++|++++ +| .+..+++|+.|++++|.++ .+|..+..+++|+.|++++|++++. | .+..+++|
T Consensus 43 ~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~~L~~L~L~~N~l~~l-~-~~~~l~~L 117 (198)
T 1ds9_A 43 TLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVADTLEELWISYNQIASL-S-GIEKLVNL 117 (198)
T ss_dssp HHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHHHCSEEEEEEEECCCH-H-HHHHHHHS
T ss_pred HHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhcCCcCCEEECcCCcCCcC-C-ccccCCCC
Confidence 56666677777777777665 34 6666677777777777766 3444556667788888888888753 3 57777888
Q ss_pred CeeeCCCCcccccCC-ccccCCCCCCEEECCCCcCcccCCcc----------ccccCCCCeEeCCCCcce
Q 039514 531 QFMDLAYNRLEGPIP-ESFGDLTSLEVLNLSKNKISGSIPKS----------MEKLFYLRELNLSFNELE 589 (790)
Q Consensus 531 ~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~p~~----------~~~l~~L~~L~Ls~N~l~ 589 (790)
++|++++|++++..+ ..+..+++|++|++++|.+++..|.. +..+++|+.|| +|+++
T Consensus 118 ~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~~l~~L~~Ld--~~~i~ 185 (198)
T 1ds9_A 118 RVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKENNATSEYRIEVVKRLPNLKKLD--GMPVD 185 (198)
T ss_dssp SEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHHTTTTHHHHHHHHHHHCSSCSEEC--CGGGT
T ss_pred CEEECCCCcCCchhHHHHHhcCCCCCEEEecCCccccccccccchHHHHHHHHHhCCCcEEEC--CcccC
Confidence 888888888875433 46778888888888888887765543 67788888886 66654
No 152
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.48 E-value=5.8e-12 Score=135.95 Aligned_cols=336 Identities=12% Similarity=0.060 Sum_probs=198.3
Q ss_pred CcceeccccCCCCCCCCEEECCCCCCcccCChhhhCCCCCCEEeCCCCCCcccCCccccCCCCCcEEEccCccCcccCch
Q 039514 64 NLQGTIPSQLGNLSSLTILNLSHNKLSGSVPSSIYTMHTLKFLDFTDNQLSGSVSSFVFNMSSIVDIRLTNNRLSGELPK 143 (790)
Q Consensus 64 ~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~lp~ 143 (790)
.++.+-..+|..+++|+.+.+.. .++.+...+|.++++|+.+++..+ ++.+....|.++.+|+.+.+..+ +. .+..
T Consensus 58 ~VtsIg~~AF~~c~~L~~i~lp~-~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~c~~L~~i~~p~~-l~-~i~~ 133 (394)
T 4fs7_A 58 DVVSIGYAAFQGCRKVTEIKIPS-TVREIGEFAFENCSKLEIINIPDS-VKMIGRCTFSGCYALKSILLPLM-LK-SIGV 133 (394)
T ss_dssp EEEEECTTTTTTCTTEEEEECCT-TCCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCCCCCCTT-CC-EECT
T ss_pred eEeEhHHHHhhCCCCceEEEeCC-CccCcchhHhhCCCCCcEEEeCCC-ceEccchhhcccccchhhcccCc-ee-eecc
Confidence 34545567899999999999974 588888899999999999999765 77778888999999998877654 44 5666
Q ss_pred hhhccCCCCCEEECCCCcCcccCCcCCCCCCCCCeeecccCcccccCcccccccCCCCceecccccccceEEcccccCcc
Q 039514 144 NICNYLPHLKALFLDKNMFHGKIPSALSKCKQLQQLNLQLNNLSGAIPKEIGNLTMLKGISLLYNKLQEALVLGMNNLVG 223 (790)
Q Consensus 144 ~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~l~l~~n~l~~ 223 (790)
..|.+...++...... .......+|.++++|+.+.+..+. ..+....|.++.+|+.+.+..+ ++.
T Consensus 134 ~aF~~~~~~~~~~~~~--~~~i~~~aF~~c~~L~~i~l~~~~-~~I~~~~F~~c~~L~~i~l~~~------------~~~ 198 (394)
T 4fs7_A 134 EAFKGCDFKEITIPEG--VTVIGDEAFATCESLEYVSLPDSM-ETLHNGLFSGCGKLKSIKLPRN------------LKI 198 (394)
T ss_dssp TTTTTCCCSEEECCTT--CCEECTTTTTTCTTCCEEECCTTC-CEECTTTTTTCTTCCBCCCCTT------------CCE
T ss_pred eeeecccccccccCcc--ccccchhhhcccCCCcEEecCCcc-ceeccccccCCCCceEEEcCCC------------ceE
Confidence 6777665444433332 333556789999999999997654 4466778888899988776544 223
Q ss_pred ccCccccCCCCCcEEEcccCCCcccCCcchhcCCCCcceEeecCCcccccCCccccCCCCCCEEeccCCcccccCccccc
Q 039514 224 VLPATIFNMSTLKVLILINNSLSGSLPSRIDLSLPTVEVLILALNRFFGTIPSSITNASKLTVLELGGNTFSGLIPDTIG 303 (790)
Q Consensus 224 ~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~ 303 (790)
+...+|.++..|+.+.+..+... +....+ ....++.+.+... ........|..+..++.+.+..+.. .+....|.
T Consensus 199 I~~~~F~~~~~L~~i~~~~~~~~--i~~~~~-~~~~l~~i~ip~~-~~~i~~~~f~~~~~l~~~~~~~~~~-~i~~~~F~ 273 (394)
T 4fs7_A 199 IRDYCFAECILLENMEFPNSLYY--LGDFAL-SKTGVKNIIIPDS-FTELGKSVFYGCTDLESISIQNNKL-RIGGSLFY 273 (394)
T ss_dssp ECTTTTTTCTTCCBCCCCTTCCE--ECTTTT-TTCCCCEEEECTT-CCEECSSTTTTCSSCCEEEECCTTC-EECSCTTT
T ss_pred eCchhhccccccceeecCCCceE--eehhhc-ccCCCceEEECCC-ceecccccccccccceeEEcCCCcc-eeeccccc
Confidence 34566777888887777655432 222222 2345555555422 2223344555666666666655433 23444555
Q ss_pred CCCCCccccccCCcccCCCCcccccccCCCCCCCCEEEccCCCCcccCCchhhhhcccCcEEEeecCcCcccCchhhhcc
Q 039514 304 NLRNLEWLNLSKNSLTSSTSKLSFLSSLANCKKLRSLKLAGNPLDGFLPSSIGNLSKSLETLVIANCSISGNIPQAISNL 383 (790)
Q Consensus 304 ~l~~L~~L~Ls~n~l~~~~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~~L~~L~l~~n~l~~~~p~~~~~l 383 (790)
....++.+....+.+.. ..+..+.+|+.+.+..+ ++.+...+|.++
T Consensus 274 ~~~~l~~~~~~~~~i~~--------~~F~~~~~L~~i~l~~~--------------------------i~~I~~~aF~~c 319 (394)
T 4fs7_A 274 NCSGLKKVIYGSVIVPE--------KTFYGCSSLTEVKLLDS--------------------------VKFIGEEAFESC 319 (394)
T ss_dssp TCTTCCEEEECSSEECT--------TTTTTCTTCCEEEECTT--------------------------CCEECTTTTTTC
T ss_pred cccccceeccCceeecc--------ccccccccccccccccc--------------------------cceechhhhcCC
Confidence 55555555544433221 12444445555544332 332333445555
Q ss_pred CCcceeeeccccccCccccccccccccCeEEeeccccCccCCccccccccccceecccCcccccCCccccCCCCCCee
Q 039514 384 SNLLTLVLERNKLTGPISITFGRLQKLQGLYLASNNLVGSFPDELCHIGRLAELALLDNRHSGSIPSCVSNLTSLRYL 461 (790)
Q Consensus 384 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L 461 (790)
++|+.+++..+ ++.+...+|.++.+|+.+.+..+ +...-..+|.++.+|+.+++..+- . .+..+|.++++|+.+
T Consensus 320 ~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~lp~~~-~-~~~~~F~~c~~L~~I 393 (394)
T 4fs7_A 320 TSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS-LRKIGANAFQGCINLKKVELPKRL-E-QYRYDFEDTTKFKWI 393 (394)
T ss_dssp TTCCEECCCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTBTTCTTCCEEEEEGGG-G-GGGGGBCTTCEEEEE
T ss_pred CCCCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc-ccEehHHHhhCCCCCCEEEECCCC-E-EhhheecCCCCCcEE
Confidence 55555555432 44444455555555555555443 443444455555555555554331 1 123456666665543
No 153
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.47 E-value=1.5e-13 Score=129.11 Aligned_cols=108 Identities=22% Similarity=0.217 Sum_probs=84.0
Q ss_pred ceEeccCCcccccccccccccccCceEeCcCCcccccCcccccCCcccCeeeCCCCcccccCCccccCCCCCCEEECCCC
Q 039514 483 LFFDFSSNFLVGTLSFDIGNLKVLLGINLSENNLSGDMPATIGGLKDLQFMDLAYNRLEGPIPESFGDLTSLEVLNLSKN 562 (790)
Q Consensus 483 ~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N 562 (790)
+.+++++|.++.. |..+ .+.|++|+|++|+|+++.|..|.++++|++|+|++|+|++..+..|.++++|++|+|++|
T Consensus 12 ~~l~~s~n~l~~i-p~~~--~~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N 88 (170)
T 3g39_A 12 TTVDCSGKSLASV-PTGI--PTTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDN 88 (170)
T ss_dssp TEEECTTSCCSSC-CSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEeCCCCcCcc-CccC--CCCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCC
Confidence 3455555555442 2222 266778888888888888888888888888888888888877778888889999999999
Q ss_pred cCcccCCccccccCCCCeEeCCCCcceecCC
Q 039514 563 KISGSIPKSMEKLFYLRELNLSFNELEGEIP 593 (790)
Q Consensus 563 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 593 (790)
+|++..+..|..+++|++|+|++|++.+.++
T Consensus 89 ~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c~ 119 (170)
T 3g39_A 89 QLKSIPRGAFDNLKSLTHIWLLNNPWDCACS 119 (170)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCBCTTBG
T ss_pred ccCEeCHHHhcCCCCCCEEEeCCCCCCCCch
Confidence 9887777778888899999999998887655
No 154
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.47 E-value=2.1e-13 Score=128.08 Aligned_cols=104 Identities=24% Similarity=0.335 Sum_probs=65.4
Q ss_pred EEECCCCCcceeccccCCCCCCCCEEECCCCCCcccCChhhhCCCCCCEEeCCCCCCcccCCccccCCCCCcEEEccCcc
Q 039514 57 ALDTSQFNLQGTIPSQLGNLSSLTILNLSHNKLSGSVPSSIYTMHTLKFLDFTDNQLSGSVSSFVFNMSSIVDIRLTNNR 136 (790)
Q Consensus 57 ~Ldl~~~~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~ 136 (790)
.+|++++.++. +|..+. ++|++|+|++|.|+++.|..|..+++|++|+|++|+|++.
T Consensus 13 ~l~~s~n~l~~-ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l-------------------- 69 (170)
T 3g39_A 13 TVDCSGKSLAS-VPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVL-------------------- 69 (170)
T ss_dssp EEECTTSCCSS-CCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCC--------------------
T ss_pred EEEeCCCCcCc-cCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCcc--------------------
Confidence 45666666664 555553 5777777777777776677777777777777777766644
Q ss_pred CcccCchhhhccCCCCCEEECCCCcCcccCCcCCCCCCCCCeeecccCcccc
Q 039514 137 LSGELPKNICNYLPHLKALFLDKNMFHGKIPSALSKCKQLQQLNLQLNNLSG 188 (790)
Q Consensus 137 l~~~lp~~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~ 188 (790)
|...|..+++|++|+|++|+|++..+..|..+++|++|+|++|.++.
T Consensus 70 -----~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c 116 (170)
T 3g39_A 70 -----PAGVFDKLTQLTQLSLNDNQLKSIPRGAFDNLKSLTHIWLLNNPWDC 116 (170)
T ss_dssp -----CTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBCT
T ss_pred -----ChhhccCCCCCCEEECCCCccCEeCHHHhcCCCCCCEEEeCCCCCCC
Confidence 44444455555555555555555555556666666666666666653
No 155
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=99.47 E-value=1.4e-14 Score=148.21 Aligned_cols=91 Identities=20% Similarity=0.357 Sum_probs=73.8
Q ss_pred cCccccceeccCCcEEEEEEEE----cCCcEEEEEEecccch--HHHHHHHHHHHHHhcCCCCceeeEeeEEEeCCeEEE
Q 039514 698 DNFAENNIIGRGGFGSVYGARL----EDGMKIAIKVFHQQCA--SALKSFEAECEVLKKIRHRNLIKVISSCSNDDFKAL 771 (790)
Q Consensus 698 ~~~~~~~~ig~g~~g~v~~~~~----~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~~~h~nlv~l~~~~~~~~~~~l 771 (790)
++|+..+.||+|+||.||+|+. .+++.||||.++.... .....+.+|+++|++++|||||++++++.+++..|+
T Consensus 24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~i 103 (304)
T 3ubd_A 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYL 103 (304)
T ss_dssp GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEE
T ss_pred cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEE
Confidence 5699999999999999999984 2478899999975422 223457889999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHhcC
Q 039514 772 VLEYMSNGSLGDWLHSS 788 (790)
Q Consensus 772 v~e~~~~G~L~~~l~~~ 788 (790)
|||||++|+|.+++++.
T Consensus 104 vmEy~~gg~L~~~l~~~ 120 (304)
T 3ubd_A 104 ILDFLRGGDLFTRLSKE 120 (304)
T ss_dssp EECCCTTCEEHHHHHHH
T ss_pred EEEcCCCCCHHHHHHhc
Confidence 99999999999999764
No 156
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=99.46 E-value=6.7e-14 Score=146.92 Aligned_cols=98 Identities=22% Similarity=0.416 Sum_probs=80.9
Q ss_pred HHHHHHhcCccccceeccCCcEEEEEEEEc------CCcEEEEEEecccch-HHHHHHHHHHHHHhcCCC-CceeeEeeE
Q 039514 691 LELLQATDNFAENNIIGRGGFGSVYGARLE------DGMKIAIKVFHQQCA-SALKSFEAECEVLKKIRH-RNLIKVISS 762 (790)
Q Consensus 691 ~~~~~~~~~~~~~~~ig~g~~g~v~~~~~~------~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~~~h-~nlv~l~~~ 762 (790)
.++....++|+..+.||+|+||.||+|.+. +++.||||++..... ...++|.+|+++|.+++| ||||+++|+
T Consensus 57 ~~wEi~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~g~ 136 (353)
T 4ase_A 57 SKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGA 136 (353)
T ss_dssp HHHBCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred cccEecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEEEE
Confidence 344445678999999999999999999843 236899999976543 345679999999999965 999999999
Q ss_pred EEe-CCeEEEEEecCCCCCHHHHHhcC
Q 039514 763 CSN-DDFKALVLEYMSNGSLGDWLHSS 788 (790)
Q Consensus 763 ~~~-~~~~~lv~e~~~~G~L~~~l~~~ 788 (790)
|.+ ++..|+|||||++|+|.++|+..
T Consensus 137 ~~~~~~~~~iV~Ey~~~G~L~~~L~~~ 163 (353)
T 4ase_A 137 CTKPGGPLMVIVEFCKFGNLSTYLRSK 163 (353)
T ss_dssp ECCTTSCCEEEEECCTTEEHHHHHHHT
T ss_pred EEecCCEEEEEEEcCCCCCHHHHHHhc
Confidence 976 45789999999999999999853
No 157
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.45 E-value=1.1e-15 Score=148.03 Aligned_cols=155 Identities=24% Similarity=0.234 Sum_probs=95.7
Q ss_pred hhccCCcceeeeccccccCcccc------ccccccccCeEEeeccccCccCCccccccccccceecccCcccccCCcccc
Q 039514 380 ISNLSNLLTLVLERNKLTGPISI------TFGRLQKLQGLYLASNNLVGSFPDELCHIGRLAELALLDNRHSGSIPSCVS 453 (790)
Q Consensus 380 ~~~l~~L~~L~L~~N~l~~~~~~------~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~p~~~~ 453 (790)
+.....++.++++.+.+.+..+. .+..+++|++|++++|.+.+ +| .+.
T Consensus 14 ~~~~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-------------------------l~-~~~ 67 (198)
T 1ds9_A 14 FEERKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-------------------------IS-SLS 67 (198)
T ss_dssp HHHTTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-------------------------CC-CHH
T ss_pred HHhcccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-------------------------cc-ccc
Confidence 45556666666666666655443 45555555555555555543 33 445
Q ss_pred CCCCCCeeeccCCccccccCcccccCCCCceEeccCCcccccccccccccccCceEeCcCCcccccCc-ccccCCcccCe
Q 039514 454 NLTSLRYLYLGSNRFTFVIPSTFWSLKDILFFDFSSNFLVGTLSFDIGNLKVLLGINLSENNLSGDMP-ATIGGLKDLQF 532 (790)
Q Consensus 454 ~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~-~~~~~l~~L~~ 532 (790)
.+++|++|++++|.++ .+|..+..+++|+.|++++|.+++. + .+..+++|++|++++|++++..+ ..+..+++|++
T Consensus 68 ~l~~L~~L~l~~n~l~-~l~~~~~~~~~L~~L~L~~N~l~~l-~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~ 144 (198)
T 1ds9_A 68 GMENLRILSLGRNLIK-KIENLDAVADTLEELWISYNQIASL-S-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLED 144 (198)
T ss_dssp HHTTCCEEEEEEEEEC-SCSSHHHHHHHCSEEEEEEEECCCH-H-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSE
T ss_pred cCCCCCEEECCCCCcc-cccchhhcCCcCCEEECcCCcCCcC-C-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCE
Confidence 5556666666666665 3344555556666666666666653 2 46667777777777777765433 46777788888
Q ss_pred eeCCCCcccccCCcc----------ccCCCCCCEEECCCCcCc
Q 039514 533 MDLAYNRLEGPIPES----------FGDLTSLEVLNLSKNKIS 565 (790)
Q Consensus 533 L~Ls~N~l~~~~p~~----------~~~l~~L~~L~L~~N~l~ 565 (790)
|++++|.+++.+|.. +..+++|+.|| +|.++
T Consensus 145 L~l~~N~l~~~~~~~~~~~~~~~~~~~~l~~L~~Ld--~~~i~ 185 (198)
T 1ds9_A 145 LLLAGNPLYNDYKENNATSEYRIEVVKRLPNLKKLD--GMPVD 185 (198)
T ss_dssp EEECSCHHHHHHHTTTTHHHHHHHHHHHCSSCSEEC--CGGGT
T ss_pred EEecCCccccccccccchHHHHHHHHHhCCCcEEEC--CcccC
Confidence 888888777665542 67778888776 66555
No 158
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.45 E-value=3.5e-13 Score=126.97 Aligned_cols=103 Identities=21% Similarity=0.341 Sum_probs=67.4
Q ss_pred EEECCCCCcceeccccCCCCCCCCEEECCCCCCcccCChhhhCCCCCCEEeCCCCCCcccCCccccCCCCCcEEEccCcc
Q 039514 57 ALDTSQFNLQGTIPSQLGNLSSLTILNLSHNKLSGSVPSSIYTMHTLKFLDFTDNQLSGSVSSFVFNMSSIVDIRLTNNR 136 (790)
Q Consensus 57 ~Ldl~~~~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~ 136 (790)
.+|++++.++ .+|..+. ++|++|+|++|.|+++.|..|..+++|++|+|++|+|++
T Consensus 16 ~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~--------------------- 71 (174)
T 2r9u_A 16 LVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTA--------------------- 71 (174)
T ss_dssp EEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCC---------------------
T ss_pred EEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCc---------------------
Confidence 5677777774 4566554 677777777777777777777777777777777777764
Q ss_pred CcccCchhhhccCCCCCEEECCCCcCcccCCcCCCCCCCCCeeecccCccc
Q 039514 137 LSGELPKNICNYLPHLKALFLDKNMFHGKIPSALSKCKQLQQLNLQLNNLS 187 (790)
Q Consensus 137 l~~~lp~~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~ 187 (790)
+|..+|..+++|++|+|++|.|++..+..|..+++|++|+|++|.+.
T Consensus 72 ----i~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~~~ 118 (174)
T 2r9u_A 72 ----IPTGVFDKLTQLTQLDLNDNHLKSIPRGAFDNLKSLTHIYLYNNPWD 118 (174)
T ss_dssp ----CCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCBC
T ss_pred ----cChhHhCCcchhhEEECCCCccceeCHHHhccccCCCEEEeCCCCcc
Confidence 44444445555556666666655555555666666666666666665
No 159
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.43 E-value=4.1e-13 Score=126.50 Aligned_cols=107 Identities=21% Similarity=0.211 Sum_probs=79.5
Q ss_pred eEeccCCcccccccccccccccCceEeCcCCcccccCcccccCCcccCeeeCCCCcccccCCccccCCCCCCEEECCCCc
Q 039514 484 FFDFSSNFLVGTLSFDIGNLKVLLGINLSENNLSGDMPATIGGLKDLQFMDLAYNRLEGPIPESFGDLTSLEVLNLSKNK 563 (790)
Q Consensus 484 ~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~ 563 (790)
.+++++|+++.. |..+. +.|+.|+|++|+|++..|..|.++++|++|+|++|+|++..+..|.++++|++|+|++|+
T Consensus 16 ~l~~~~n~l~~i-P~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~ 92 (174)
T 2r9u_A 16 LVNCQNIRLASV-PAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDNH 92 (174)
T ss_dssp EEECCSSCCSSC-CSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEEeCCCCCCcc-CCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCCc
Confidence 455555555322 22222 567778888888887778888888888888888888887777777888888888888888
Q ss_pred CcccCCccccccCCCCeEeCCCCcceecCC
Q 039514 564 ISGSIPKSMEKLFYLRELNLSFNELEGEIP 593 (790)
Q Consensus 564 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 593 (790)
|++..+..|..+++|++|+|++|++.+..+
T Consensus 93 l~~l~~~~~~~l~~L~~L~L~~N~~~c~~~ 122 (174)
T 2r9u_A 93 LKSIPRGAFDNLKSLTHIYLYNNPWDCECR 122 (174)
T ss_dssp CCCCCTTTTTTCTTCSEEECCSSCBCTTBG
T ss_pred cceeCHHHhccccCCCEEEeCCCCcccccc
Confidence 886666668888888888888888876544
No 160
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=99.42 E-value=3.1e-13 Score=152.01 Aligned_cols=92 Identities=22% Similarity=0.374 Sum_probs=83.9
Q ss_pred hcCccccceeccCCcEEEEEEE-EcCCcEEEEEEecccchHHHHHHHHHHHHHhcCCCCceeeEeeEEEeCCeEEEEEec
Q 039514 697 TDNFAENNIIGRGGFGSVYGAR-LEDGMKIAIKVFHQQCASALKSFEAECEVLKKIRHRNLIKVISSCSNDDFKALVLEY 775 (790)
Q Consensus 697 ~~~~~~~~~ig~g~~g~v~~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~~~h~nlv~l~~~~~~~~~~~lv~e~ 775 (790)
.++|+..+.||+|+||.||+|. ..+|+.||+|.+........+.+.+|+.+|+.++|||||++++++.+++..|+||||
T Consensus 156 l~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~ 235 (573)
T 3uto_A 156 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEF 235 (573)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred ccccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEee
Confidence 4679999999999999999999 568999999999876666667789999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhcC
Q 039514 776 MSNGSLGDWLHSS 788 (790)
Q Consensus 776 ~~~G~L~~~l~~~ 788 (790)
|++|+|.++|..+
T Consensus 236 ~~gg~L~~~i~~~ 248 (573)
T 3uto_A 236 MSGGELFEKVADE 248 (573)
T ss_dssp CCCCBHHHHHTCT
T ss_pred cCCCcHHHHHHHh
Confidence 9999999999653
No 161
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=99.37 E-value=6.8e-13 Score=141.81 Aligned_cols=91 Identities=29% Similarity=0.391 Sum_probs=77.7
Q ss_pred cCccccceeccCCcEEEEEEE-EcCCcEEEEEEecccc--hHHHHHHHHHHHHHhcCCCCceeeEeeEEEe------CCe
Q 039514 698 DNFAENNIIGRGGFGSVYGAR-LEDGMKIAIKVFHQQC--ASALKSFEAECEVLKKIRHRNLIKVISSCSN------DDF 768 (790)
Q Consensus 698 ~~~~~~~~ig~g~~g~v~~~~-~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~~~h~nlv~l~~~~~~------~~~ 768 (790)
++|+..+.||+|+||.||+|. ..+|+.||||+++... ....+.+.+|+++|++++|||||++++++.. .+.
T Consensus 54 ~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~ 133 (398)
T 4b99_A 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKS 133 (398)
T ss_dssp SSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCC
T ss_pred CCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCE
Confidence 569999999999999999999 5789999999997543 3345678899999999999999999999764 357
Q ss_pred EEEEEecCCCCCHHHHHhcCC
Q 039514 769 KALVLEYMSNGSLGDWLHSSN 789 (790)
Q Consensus 769 ~~lv~e~~~~G~L~~~l~~~~ 789 (790)
+|+|||||+ |+|.+++...+
T Consensus 134 ~~ivmE~~~-g~L~~~i~~~~ 153 (398)
T 4b99_A 134 VYVVLDLME-SDLHQIIHSSQ 153 (398)
T ss_dssp EEEEEECCS-EEHHHHHTSSS
T ss_pred EEEEEeCCC-CCHHHHHHhcC
Confidence 899999996 68999997643
No 162
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.36 E-value=9.8e-13 Score=139.62 Aligned_cols=108 Identities=19% Similarity=0.213 Sum_probs=92.8
Q ss_pred CCccccccCCCCCcEEEEECCCC-CcceeccccCCCCCCCCEEECCC-CCCcccCChhhhCCCCCCEEeCCCCCCcccCC
Q 039514 41 CTWIGITCDVNSHRVTALDTSQF-NLQGTIPSQLGNLSSLTILNLSH-NKLSGSVPSSIYTMHTLKFLDFTDNQLSGSVS 118 (790)
Q Consensus 41 c~w~gv~c~~~~~~v~~Ldl~~~-~l~~~~~~~~~~l~~L~~L~Ls~-N~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~ 118 (790)
|.|.+|.|+ ++ ++++ +|. |..+++|++|+|++ |.|+++.+..|..+++|++|+|++|+|++..|
T Consensus 8 C~~~~v~~~------------~~n~l~~-ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 73 (347)
T 2ifg_A 8 HGSSGLRCT------------RDGALDS-LHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAP 73 (347)
T ss_dssp SSSSCEECC------------SSCCCTT-TTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECT
T ss_pred ccCCEEEcC------------CCCCCCc-cCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCH
Confidence 666666554 34 5664 687 99999999999996 99999988999999999999999999999999
Q ss_pred ccccCCCCCcEEEccCccCcccCchhhhccCCCCCEEECCCCcCcc
Q 039514 119 SFVFNMSSIVDIRLTNNRLSGELPKNICNYLPHLKALFLDKNMFHG 164 (790)
Q Consensus 119 ~~~~~l~~L~~L~L~~N~l~~~lp~~~~~~l~~L~~L~L~~N~i~~ 164 (790)
..|.++++|+.|+|++|+|+ .+|..+|..++ |++|+|.+|.+..
T Consensus 74 ~~~~~l~~L~~L~l~~N~l~-~~~~~~~~~~~-L~~l~l~~N~~~c 117 (347)
T 2ifg_A 74 DAFHFTPRLSRLNLSFNALE-SLSWKTVQGLS-LQELVLSGNPLHC 117 (347)
T ss_dssp TGGGSCSCCCEEECCSSCCS-CCCSTTTCSCC-CCEEECCSSCCCC
T ss_pred HHhcCCcCCCEEeCCCCccc-eeCHHHcccCC-ceEEEeeCCCccC
Confidence 99999999999999999998 78887777665 8999999888874
No 163
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=99.33 E-value=2.3e-12 Score=143.89 Aligned_cols=93 Identities=24% Similarity=0.395 Sum_probs=77.3
Q ss_pred hcCccccceeccCCcEEEEEEE-EcCCcEEEEEEecccchH---HHH---HHHHHHHHHhcCCCCceeeEeeEEEeCCeE
Q 039514 697 TDNFAENNIIGRGGFGSVYGAR-LEDGMKIAIKVFHQQCAS---ALK---SFEAECEVLKKIRHRNLIKVISSCSNDDFK 769 (790)
Q Consensus 697 ~~~~~~~~~ig~g~~g~v~~~~-~~~~~~vavK~~~~~~~~---~~~---~~~~e~~~l~~~~h~nlv~l~~~~~~~~~~ 769 (790)
.++|+..++||+|+||.||+|+ ..+|+.||||++.+.... ... ....++.+++.++|||||++++++.+.+.+
T Consensus 188 lddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~l 267 (689)
T 3v5w_A 188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKL 267 (689)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEE
T ss_pred hHHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEE
Confidence 3679999999999999999999 567999999999754321 112 223446778888999999999999999999
Q ss_pred EEEEecCCCCCHHHHHhcCC
Q 039514 770 ALVLEYMSNGSLGDWLHSSN 789 (790)
Q Consensus 770 ~lv~e~~~~G~L~~~l~~~~ 789 (790)
|+|||||+||+|.++|++.+
T Consensus 268 ylVmEy~~GGdL~~~l~~~~ 287 (689)
T 3v5w_A 268 SFILDLMNGGDLHYHLSQHG 287 (689)
T ss_dssp EEEECCCCSCBHHHHHHHHC
T ss_pred EEEEecCCCCcHHHHHHhcC
Confidence 99999999999999997643
No 164
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=99.32 E-value=3.8e-12 Score=133.31 Aligned_cols=102 Identities=19% Similarity=0.253 Sum_probs=88.2
Q ss_pred cccCHHHHHHHhcC----------ccccceeccCCcEEEEEEEE-cCCcEEEEEEecccchHHHHHHHHHHHHHhcCCCC
Q 039514 686 RRFSYLELLQATDN----------FAENNIIGRGGFGSVYGARL-EDGMKIAIKVFHQQCASALKSFEAECEVLKKIRHR 754 (790)
Q Consensus 686 ~~~~~~~~~~~~~~----------~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~~~h~ 754 (790)
+.++++++..+++. |...+.||+|+||.||+|.. .+|+.||||.+........+.+.+|+.++++++||
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ 102 (321)
T 2c30_A 23 GVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHF 102 (321)
T ss_dssp --CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCCT
T ss_pred CcCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCCC
Confidence 46788888777764 66778999999999999995 47999999999765555567788999999999999
Q ss_pred ceeeEeeEEEeCCeEEEEEecCCCCCHHHHHhc
Q 039514 755 NLIKVISSCSNDDFKALVLEYMSNGSLGDWLHS 787 (790)
Q Consensus 755 nlv~l~~~~~~~~~~~lv~e~~~~G~L~~~l~~ 787 (790)
||+++++++...+..++||||+++|+|.+++..
T Consensus 103 niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~ 135 (321)
T 2c30_A 103 NVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQ 135 (321)
T ss_dssp TBCCEEEEEEETTEEEEEECCCCSCBHHHHHTT
T ss_pred CcceEEEEEEECCEEEEEEecCCCCCHHHHHHh
Confidence 999999999999999999999999999999865
No 165
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=99.31 E-value=3.3e-12 Score=135.00 Aligned_cols=91 Identities=27% Similarity=0.339 Sum_probs=78.4
Q ss_pred HHhcCccccceeccCCcEEEEEEEE----cCCcEEEEEEecccchHHHHHHHHHHHHHhcC-CCCceeeEeeEEEeCCeE
Q 039514 695 QATDNFAENNIIGRGGFGSVYGARL----EDGMKIAIKVFHQQCASALKSFEAECEVLKKI-RHRNLIKVISSCSNDDFK 769 (790)
Q Consensus 695 ~~~~~~~~~~~ig~g~~g~v~~~~~----~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~~-~h~nlv~l~~~~~~~~~~ 769 (790)
...+.|+..+.||+|+||.||+|+. .+++.||||.+..... ...+.+|++++..+ .|||||++++++.+.+..
T Consensus 18 ~l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~--~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~~ 95 (361)
T 4f9c_A 18 QLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTSH--PIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHV 95 (361)
T ss_dssp GGGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTSC--HHHHHHHHHHHHHTCSBTTBCCCSEEEEETTEE
T ss_pred CccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEccccC--HHHHHHHHHHHHHhcCCCCCceEEEEEEECCEE
Confidence 4557899999999999999999973 2468899999875432 34578999999988 699999999999999999
Q ss_pred EEEEecCCCCCHHHHHhc
Q 039514 770 ALVLEYMSNGSLGDWLHS 787 (790)
Q Consensus 770 ~lv~e~~~~G~L~~~l~~ 787 (790)
|+|||||++|+|.++++.
T Consensus 96 ~lvmE~~~g~~L~~~~~~ 113 (361)
T 4f9c_A 96 VIAMPYLEHESFLDILNS 113 (361)
T ss_dssp EEEEECCCCCCHHHHHTT
T ss_pred EEEEeCCCcccHHHHHcC
Confidence 999999999999999853
No 166
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=99.29 E-value=1e-11 Score=129.41 Aligned_cols=90 Identities=22% Similarity=0.429 Sum_probs=82.6
Q ss_pred cCccccceeccCCcEEEEEEEE-cCCcEEEEEEecccchHHHHHHHHHHHHHhcCCCCceeeEeeEEEeCCeEEEEEecC
Q 039514 698 DNFAENNIIGRGGFGSVYGARL-EDGMKIAIKVFHQQCASALKSFEAECEVLKKIRHRNLIKVISSCSNDDFKALVLEYM 776 (790)
Q Consensus 698 ~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~~~h~nlv~l~~~~~~~~~~~lv~e~~ 776 (790)
++|...+.||+|+||.||+|.. .+++.||+|.+........+.+.+|++++.+++||||+++++++.+++..++||||+
T Consensus 10 ~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~ 89 (310)
T 3s95_A 10 SDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYI 89 (310)
T ss_dssp GGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred hHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEEec
Confidence 5688899999999999999994 578999999997766666778999999999999999999999999999999999999
Q ss_pred CCCCHHHHHhc
Q 039514 777 SNGSLGDWLHS 787 (790)
Q Consensus 777 ~~G~L~~~l~~ 787 (790)
++|+|.++++.
T Consensus 90 ~~~~L~~~l~~ 100 (310)
T 3s95_A 90 KGGTLRGIIKS 100 (310)
T ss_dssp TTCBHHHHHHH
T ss_pred CCCcHHHHHHh
Confidence 99999999976
No 167
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=99.29 E-value=8.2e-12 Score=129.20 Aligned_cols=93 Identities=25% Similarity=0.397 Sum_probs=83.0
Q ss_pred HhcCccccceeccCCcEEEEEEE-EcCCcEEEEEEecccchHHHHHHHHHHHHHhcCCCCceeeEeeEEEeCCeEEEEEe
Q 039514 696 ATDNFAENNIIGRGGFGSVYGAR-LEDGMKIAIKVFHQQCASALKSFEAECEVLKKIRHRNLIKVISSCSNDDFKALVLE 774 (790)
Q Consensus 696 ~~~~~~~~~~ig~g~~g~v~~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~~~h~nlv~l~~~~~~~~~~~lv~e 774 (790)
..++|...+.||+|+||.||+|. ..+++.||||.+........+.+.+|+.++++++||||+++++++..++..++|||
T Consensus 18 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 97 (297)
T 3fxz_A 18 PKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVME 97 (297)
T ss_dssp GGGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred hhhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEE
Confidence 34679999999999999999998 57799999999976554445678899999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhcC
Q 039514 775 YMSNGSLGDWLHSS 788 (790)
Q Consensus 775 ~~~~G~L~~~l~~~ 788 (790)
|+++|+|.+++...
T Consensus 98 ~~~~~~L~~~~~~~ 111 (297)
T 3fxz_A 98 YLAGGSLTDVVTET 111 (297)
T ss_dssp CCTTCBHHHHHHHS
T ss_pred CCCCCCHHHHHhhc
Confidence 99999999998754
No 168
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=99.29 E-value=2.7e-12 Score=139.51 Aligned_cols=99 Identities=22% Similarity=0.324 Sum_probs=84.4
Q ss_pred CHHHHHHHhcCccccceeccCCcEEEEEEEE-cCCcEEEEEEecccchHH---HHHHHHHHHHHhcCCCCceeeEeeEEE
Q 039514 689 SYLELLQATDNFAENNIIGRGGFGSVYGARL-EDGMKIAIKVFHQQCASA---LKSFEAECEVLKKIRHRNLIKVISSCS 764 (790)
Q Consensus 689 ~~~~~~~~~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~~~~---~~~~~~e~~~l~~~~h~nlv~l~~~~~ 764 (790)
.+.++...+++|+..++||+|+||.||+|.. .+++.||||++.+..... ...+.+|+.++..++|||||+++++|.
T Consensus 65 ~~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~ 144 (437)
T 4aw2_A 65 KVKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQ 144 (437)
T ss_dssp HHHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEE
T ss_pred hhhcccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEe
Confidence 3445555678999999999999999999995 458899999997643221 233789999999999999999999999
Q ss_pred eCCeEEEEEecCCCCCHHHHHhc
Q 039514 765 NDDFKALVLEYMSNGSLGDWLHS 787 (790)
Q Consensus 765 ~~~~~~lv~e~~~~G~L~~~l~~ 787 (790)
+++..|+|||||++|+|.++++.
T Consensus 145 ~~~~~~lV~Ey~~gg~L~~~l~~ 167 (437)
T 4aw2_A 145 DDNNLYLVMDYYVGGDLLTLLSK 167 (437)
T ss_dssp CSSEEEEEECCCTTCBHHHHHHT
T ss_pred eCCEEEEEEecCCCCcHHHHHHH
Confidence 99999999999999999999976
No 169
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=99.28 E-value=1e-12 Score=137.90 Aligned_cols=101 Identities=36% Similarity=0.596 Sum_probs=88.6
Q ss_pred cCHHHHHHHhcCccccceeccCCcEEEEEEEEcCCcEEEEEEecccchHHHHHHHHHHHHHhcCCCCceeeEeeEEEeCC
Q 039514 688 FSYLELLQATDNFAENNIIGRGGFGSVYGARLEDGMKIAIKVFHQQCASALKSFEAECEVLKKIRHRNLIKVISSCSNDD 767 (790)
Q Consensus 688 ~~~~~~~~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~~~h~nlv~l~~~~~~~~ 767 (790)
+++.++...+++|+..+.||+|+||.||+|...+++.||||.+........+.+.+|+.++++++||||+++++++..++
T Consensus 29 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 108 (321)
T 2qkw_B 29 VPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERN 108 (321)
T ss_dssp -CCSCCCCCCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTT
T ss_pred ecHHHHHHHHhccCccceeecCCCeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCC
Confidence 34444556778999999999999999999998789999999998765556678999999999999999999999999999
Q ss_pred eEEEEEecCCCCCHHHHHhcC
Q 039514 768 FKALVLEYMSNGSLGDWLHSS 788 (790)
Q Consensus 768 ~~~lv~e~~~~G~L~~~l~~~ 788 (790)
..++||||+++|+|.+++...
T Consensus 109 ~~~lv~e~~~~~~L~~~l~~~ 129 (321)
T 2qkw_B 109 EMILIYKYMENGNLKRHLYGS 129 (321)
T ss_dssp CCEEEEECCTTCBTGGGSSSS
T ss_pred eEEEEEEcCCCCcHHHHHhcc
Confidence 999999999999999988653
No 170
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=99.28 E-value=9.6e-12 Score=130.39 Aligned_cols=93 Identities=27% Similarity=0.468 Sum_probs=82.2
Q ss_pred HhcCccccceeccCCcEEEEEEE-EcCCcEEEEEEecccc--hHHHHHHHHHHHHHhcCCCCceeeEeeEEEeCCeEEEE
Q 039514 696 ATDNFAENNIIGRGGFGSVYGAR-LEDGMKIAIKVFHQQC--ASALKSFEAECEVLKKIRHRNLIKVISSCSNDDFKALV 772 (790)
Q Consensus 696 ~~~~~~~~~~ig~g~~g~v~~~~-~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~~~h~nlv~l~~~~~~~~~~~lv 772 (790)
...+|...+.||+|+||.||+|. ..+|+.||||++.... ....+.+.+|+++++.++||||+++++++.+.+..|+|
T Consensus 13 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv 92 (328)
T 3fe3_A 13 HIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLI 92 (328)
T ss_dssp EETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEE
Confidence 34679999999999999999999 4789999999997543 33456788999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHhcC
Q 039514 773 LEYMSNGSLGDWLHSS 788 (790)
Q Consensus 773 ~e~~~~G~L~~~l~~~ 788 (790)
|||+++|+|.+++...
T Consensus 93 ~e~~~~~~L~~~l~~~ 108 (328)
T 3fe3_A 93 MEYASGGEVFDYLVAH 108 (328)
T ss_dssp ECCCTTCBHHHHHHHH
T ss_pred EECCCCCcHHHHHHHc
Confidence 9999999999998653
No 171
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=99.27 E-value=2.9e-12 Score=134.65 Aligned_cols=107 Identities=39% Similarity=0.671 Sum_probs=92.3
Q ss_pred cccccccCHHHHHHHhcCccccceeccCCcEEEEEEEEcCCcEEEEEEecccchH-HHHHHHHHHHHHhcCCCCceeeEe
Q 039514 682 QATLRRFSYLELLQATDNFAENNIIGRGGFGSVYGARLEDGMKIAIKVFHQQCAS-ALKSFEAECEVLKKIRHRNLIKVI 760 (790)
Q Consensus 682 ~~~~~~~~~~~~~~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~~~h~nlv~l~ 760 (790)
......|++.++....++|...+.||+|+||.||+|...+++.||||++...... ....+.+|++++.+++||||++++
T Consensus 14 ~~~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~ 93 (326)
T 3uim_A 14 LGQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLR 93 (326)
T ss_dssp -CCCEECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCC
T ss_pred cCccceecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceE
Confidence 3445678899999999999999999999999999999778999999999764322 223688999999999999999999
Q ss_pred eEEEeCCeEEEEEecCCCCCHHHHHhcC
Q 039514 761 SSCSNDDFKALVLEYMSNGSLGDWLHSS 788 (790)
Q Consensus 761 ~~~~~~~~~~lv~e~~~~G~L~~~l~~~ 788 (790)
+++...+..++||||+++|+|.++++..
T Consensus 94 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~ 121 (326)
T 3uim_A 94 GFCMTPTERLLVYPYMANGSVASCLRER 121 (326)
T ss_dssp EEECCSSCCEEEEECCTTCBHHHHHHCC
T ss_pred EEEecCCceEEEEEeccCCCHHHHHHhc
Confidence 9999999999999999999999999764
No 172
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=99.25 E-value=2.3e-11 Score=126.62 Aligned_cols=103 Identities=36% Similarity=0.596 Sum_probs=90.8
Q ss_pred cccccCHHHHHHHhcCcccc------ceeccCCcEEEEEEEEcCCcEEEEEEecccc----hHHHHHHHHHHHHHhcCCC
Q 039514 684 TLRRFSYLELLQATDNFAEN------NIIGRGGFGSVYGARLEDGMKIAIKVFHQQC----ASALKSFEAECEVLKKIRH 753 (790)
Q Consensus 684 ~~~~~~~~~~~~~~~~~~~~------~~ig~g~~g~v~~~~~~~~~~vavK~~~~~~----~~~~~~~~~e~~~l~~~~h 753 (790)
....|++.++..++.+|... +.||+|+||.||+|.. +++.||||.+.... ....+.+.+|+.++++++|
T Consensus 11 ~~~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h 89 (307)
T 2nru_A 11 RFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQH 89 (307)
T ss_dssp CCEECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCC
T ss_pred CCCcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCC
Confidence 45678999999999999887 8999999999999986 58899999986532 2345678999999999999
Q ss_pred CceeeEeeEEEeCCeEEEEEecCCCCCHHHHHhc
Q 039514 754 RNLIKVISSCSNDDFKALVLEYMSNGSLGDWLHS 787 (790)
Q Consensus 754 ~nlv~l~~~~~~~~~~~lv~e~~~~G~L~~~l~~ 787 (790)
|||+++++++..++..++||||+++|+|.+++..
T Consensus 90 ~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~ 123 (307)
T 2nru_A 90 ENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSC 123 (307)
T ss_dssp TTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHT
T ss_pred CCeEEEEEEEecCCceEEEEEecCCCcHHHHHHh
Confidence 9999999999999999999999999999999874
No 173
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=99.25 E-value=6.3e-10 Score=119.94 Aligned_cols=332 Identities=11% Similarity=0.159 Sum_probs=187.9
Q ss_pred eccccCCCCC-CCCEEECCCCCCcccCChhhhCCCCCCEEeCCCCC---CcccCCccccCCCCCcEEEccCccCcccCch
Q 039514 68 TIPSQLGNLS-SLTILNLSHNKLSGSVPSSIYTMHTLKFLDFTDNQ---LSGSVSSFVFNMSSIVDIRLTNNRLSGELPK 143 (790)
Q Consensus 68 ~~~~~~~~l~-~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~n~---l~~~~~~~~~~l~~L~~L~L~~N~l~~~lp~ 143 (790)
+-..+|.+.. .|+.+.+.. .++.+...+|.++++|+.+.++.|. ++.+...+|.++.+|+.+.+..+ ++ .++.
T Consensus 54 Ig~~aF~~~~~~L~sI~iP~-svt~Ig~~AF~~C~~L~~i~~~~n~p~~l~~Ig~~aF~~c~~L~~i~~~~~-~~-~I~~ 130 (394)
T 4gt6_A 54 IGDRVFCNYKYVLTSVQIPD-TVTEIGSNAFYNCTSLKRVTIQDNKPSCVKKIGRQAFMFCSELTDIPILDS-VT-EIDS 130 (394)
T ss_dssp ECTTTTTTCCSCCCEEEECT-TCCEECTTTTTTCTTCCEEEEGGGCCCCCCEECTTTTTTCTTCCBCGGGTT-CS-EECT
T ss_pred cCHhhccCCCCcCEEEEECC-CeeEEhHHHhhCCccCceEeecCCCCCeeeEechhhchhcccceeeccCCc-cc-eehh
Confidence 3355677764 588888875 4777888899999999999988764 77677888888888888877655 44 6777
Q ss_pred hhhccCCCCCEEECCCCcCcccCCcCCCCCCCCCeeecccCcccccCcccccccCCCCceecccccccceEEcccccCcc
Q 039514 144 NICNYLPHLKALFLDKNMFHGKIPSALSKCKQLQQLNLQLNNLSGAIPKEIGNLTMLKGISLLYNKLQEALVLGMNNLVG 223 (790)
Q Consensus 144 ~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~l~l~~n~l~~ 223 (790)
..|....+|+.+.+..+ +......+|..+.+|+.+.+..+ ++.+...+|.. ..|+.+.+..+. ..
T Consensus 131 ~aF~~c~~L~~i~lp~~-~~~I~~~~F~~c~~L~~i~~~~~-~~~I~~~aF~~-~~l~~i~ip~~~------------~~ 195 (394)
T 4gt6_A 131 EAFHHCEELDTVTIPEG-VTSVADGMFSYCYSLHTVTLPDS-VTAIEERAFTG-TALTQIHIPAKV------------TR 195 (394)
T ss_dssp TTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTT-CCCSEEEECTTC------------CE
T ss_pred hhhhhhcccccccccce-eeeecccceecccccccccccce-eeEeccccccc-cceeEEEECCcc------------cc
Confidence 88888888999988754 45566778888889998888765 55455566654 567665543321 22
Q ss_pred ccCccccCCCCCcEEEcccCCCcccCCcchhcCCCCcceEeecCCcccccCCccccCCCCCCEEeccCCcccccCccccc
Q 039514 224 VLPATIFNMSTLKVLILINNSLSGSLPSRIDLSLPTVEVLILALNRFFGTIPSSITNASKLTVLELGGNTFSGLIPDTIG 303 (790)
Q Consensus 224 ~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~ 303 (790)
+-..+|.++..++......+... .+...++.......... ..+.....+..+.+.. .++.+...+|.
T Consensus 196 i~~~af~~c~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~ip~-~v~~i~~~aF~ 262 (394)
T 4gt6_A 196 IGTNAFSECFALSTITSDSESYP-AIDNVLYEKSANGDYAL-----------IRYPSQREDPAFKIPN-GVARIETHAFD 262 (394)
T ss_dssp ECTTTTTTCTTCCEEEECCSSSC-BSSSCEEEECTTSCEEE-----------EECCTTCCCSEEECCT-TEEEECTTTTT
T ss_pred cccchhhhccccceecccccccc-cccceeecccccccccc-----------cccccccccceEEcCC-cceEcccceee
Confidence 33455666777777666554432 11111110000000000 0011122233333321 23333344555
Q ss_pred CCCCCccccccCCcccCCCCcccccccCCCCCCCCEEEccCCCCcccCCchhhhhcccCcEEEeecCcCcccCchhhhcc
Q 039514 304 NLRNLEWLNLSKNSLTSSTSKLSFLSSLANCKKLRSLKLAGNPLDGFLPSSIGNLSKSLETLVIANCSISGNIPQAISNL 383 (790)
Q Consensus 304 ~l~~L~~L~Ls~n~l~~~~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~~L~~L~l~~n~l~~~~p~~~~~l 383 (790)
.+..|+.+.+..+... +.. .+|.+++.|+.+.+.. .+.......|... .+|+.+.+..+ ++.+-..+|.++
T Consensus 263 ~c~~L~~i~lp~~~~~-I~~-----~aF~~c~~L~~i~l~~-~i~~I~~~aF~~c-~~L~~i~lp~~-v~~I~~~aF~~C 333 (394)
T 4gt6_A 263 SCAYLASVKMPDSVVS-IGT-----GAFMNCPALQDIEFSS-RITELPESVFAGC-ISLKSIDIPEG-ITQILDDAFAGC 333 (394)
T ss_dssp TCSSCCEEECCTTCCE-ECT-----TTTTTCTTCCEEECCT-TCCEECTTTTTTC-TTCCEEECCTT-CCEECTTTTTTC
T ss_pred ecccccEEecccccce-ecC-----cccccccccccccCCC-cccccCceeecCC-CCcCEEEeCCc-ccEehHhHhhCC
Confidence 5555555555433221 111 2355556666666642 2332223333332 45666666543 444555677777
Q ss_pred CCcceeeeccccccCccccccccccccCeEEeeccccCccCCccccccccccceecccCc
Q 039514 384 SNLLTLVLERNKLTGPISITFGRLQKLQGLYLASNNLVGSFPDELCHIGRLAELALLDNR 443 (790)
Q Consensus 384 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~ 443 (790)
.+|+.+.+..+ ++.+...+|.++.+|+.+++.++.... ..+.....|+.+.+..+.
T Consensus 334 ~~L~~i~ip~s-v~~I~~~aF~~C~~L~~i~~~~~~~~~---~~~~~~~~L~~i~i~~~~ 389 (394)
T 4gt6_A 334 EQLERIAIPSS-VTKIPESAFSNCTALNNIEYSGSRSQW---NAISTDSGLQNLPVAPGS 389 (394)
T ss_dssp TTCCEEEECTT-CCBCCGGGGTTCTTCCEEEESSCHHHH---HTCBCCCCC---------
T ss_pred CCCCEEEECcc-cCEEhHhHhhCCCCCCEEEECCceeeh---hhhhccCCCCEEEeCCCC
Confidence 77777777543 555666777777777777777765431 234455566666655443
No 174
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=99.24 E-value=1.6e-11 Score=130.38 Aligned_cols=93 Identities=26% Similarity=0.403 Sum_probs=81.5
Q ss_pred HhcCccccceeccCCcEEEEEEE-EcCCcEEEEEEecccchH------HHHHHHHHHHHHhcCCCCceeeEeeEEEeCCe
Q 039514 696 ATDNFAENNIIGRGGFGSVYGAR-LEDGMKIAIKVFHQQCAS------ALKSFEAECEVLKKIRHRNLIKVISSCSNDDF 768 (790)
Q Consensus 696 ~~~~~~~~~~ig~g~~g~v~~~~-~~~~~~vavK~~~~~~~~------~~~~~~~e~~~l~~~~h~nlv~l~~~~~~~~~ 768 (790)
..+.|...+.||+|+||.||+|. ..+|+.||||.+...... ..+.+.+|+.++.+++|||||++++++.+.+.
T Consensus 10 ~~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~ 89 (361)
T 2yab_A 10 VEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTD 89 (361)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSE
T ss_pred hhhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCE
Confidence 34678999999999999999999 457899999999754321 24678899999999999999999999999999
Q ss_pred EEEEEecCCCCCHHHHHhcC
Q 039514 769 KALVLEYMSNGSLGDWLHSS 788 (790)
Q Consensus 769 ~~lv~e~~~~G~L~~~l~~~ 788 (790)
.|+||||+++|+|.+++...
T Consensus 90 ~~lv~e~~~gg~L~~~l~~~ 109 (361)
T 2yab_A 90 VVLILELVSGGELFDFLAQK 109 (361)
T ss_dssp EEEEEECCCSCBHHHHHTTC
T ss_pred EEEEEEcCCCCcHHHHHHhc
Confidence 99999999999999998754
No 175
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.23 E-value=2e-11 Score=129.40 Aligned_cols=90 Identities=26% Similarity=0.248 Sum_probs=46.2
Q ss_pred ccccccCceEeCcC-CcccccCcccccCCcccCeeeCCCCcccccCCccccCCCCCCEEECCCCcCcccCCccccccCCC
Q 039514 500 IGNLKVLLGINLSE-NNLSGDMPATIGGLKDLQFMDLAYNRLEGPIPESFGDLTSLEVLNLSKNKISGSIPKSMEKLFYL 578 (790)
Q Consensus 500 ~~~l~~L~~L~Ls~-N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L 578 (790)
+..+++|+.|+|++ |+|+++.+..|.++++|+.|+|++|+|++.+|..|.++++|++|+|++|+|++..+..|..+. |
T Consensus 27 l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~-L 105 (347)
T 2ifg_A 27 LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFNALESLSWKTVQGLS-L 105 (347)
T ss_dssp SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSSCCSCCCSTTTCSCC-C
T ss_pred CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCCCccceeCHHHcccCC-c
Confidence 44444555555553 555544445555555555555555555555555555555555555555555544333443333 5
Q ss_pred CeEeCCCCccee
Q 039514 579 RELNLSFNELEG 590 (790)
Q Consensus 579 ~~L~Ls~N~l~~ 590 (790)
+.|+|++|++.+
T Consensus 106 ~~l~l~~N~~~c 117 (347)
T 2ifg_A 106 QELVLSGNPLHC 117 (347)
T ss_dssp CEEECCSSCCCC
T ss_pred eEEEeeCCCccC
Confidence 555555555544
No 176
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=99.22 E-value=1.7e-11 Score=128.92 Aligned_cols=91 Identities=25% Similarity=0.383 Sum_probs=80.2
Q ss_pred cCccccceeccCCcEEEEEEE-EcCCcEEEEEEecccch---HHHHHHHHHHHHHhcCCCCceeeEeeEEEeCCeEEEEE
Q 039514 698 DNFAENNIIGRGGFGSVYGAR-LEDGMKIAIKVFHQQCA---SALKSFEAECEVLKKIRHRNLIKVISSCSNDDFKALVL 773 (790)
Q Consensus 698 ~~~~~~~~ig~g~~g~v~~~~-~~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~~~h~nlv~l~~~~~~~~~~~lv~ 773 (790)
++|+..+.||+|+||.||+|. ..+|+.||+|.++.... .....+.+|+.++.+++||||+++++++.+.+..|+||
T Consensus 5 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~ 84 (337)
T 1o6l_A 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVM 84 (337)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEEE
Confidence 578899999999999999999 45799999999976432 23456889999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhcC
Q 039514 774 EYMSNGSLGDWLHSS 788 (790)
Q Consensus 774 e~~~~G~L~~~l~~~ 788 (790)
||+++|+|.+++...
T Consensus 85 E~~~gg~L~~~l~~~ 99 (337)
T 1o6l_A 85 EYANGGELFFHLSRE 99 (337)
T ss_dssp ECCTTCBHHHHHHHH
T ss_pred eCCCCCcHHHHHHhc
Confidence 999999999998753
No 177
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=99.22 E-value=1.3e-11 Score=130.16 Aligned_cols=93 Identities=29% Similarity=0.445 Sum_probs=81.1
Q ss_pred HhcCccccceeccCCcEEEEEEE-EcCCcEEEEEEecccch-HHHHHHHHHHHHHhcCCCCceeeEeeEEEeCCeEEEEE
Q 039514 696 ATDNFAENNIIGRGGFGSVYGAR-LEDGMKIAIKVFHQQCA-SALKSFEAECEVLKKIRHRNLIKVISSCSNDDFKALVL 773 (790)
Q Consensus 696 ~~~~~~~~~~ig~g~~g~v~~~~-~~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~~~h~nlv~l~~~~~~~~~~~lv~ 773 (790)
..++|...+.||+|+||.||+|. ..+|+.||||.+..... ...+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 8 l~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lv~ 87 (347)
T 3zgw_A 8 LLKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLETANKIFMVL 87 (347)
T ss_dssp TTTTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC---CCHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HhcCeEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccchHHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEEE
Confidence 45789999999999999999999 57899999999976432 23356889999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhcC
Q 039514 774 EYMSNGSLGDWLHSS 788 (790)
Q Consensus 774 e~~~~G~L~~~l~~~ 788 (790)
||+++|+|.+++...
T Consensus 88 E~~~gg~L~~~l~~~ 102 (347)
T 3zgw_A 88 EYCPGGELFDYIISQ 102 (347)
T ss_dssp ECCTTCBHHHHHHHH
T ss_pred eCCCCCCHHHHHHHc
Confidence 999999999998653
No 178
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=99.22 E-value=1.5e-11 Score=131.50 Aligned_cols=91 Identities=27% Similarity=0.526 Sum_probs=79.4
Q ss_pred cCccccceeccCCcEEEEEEEEc----CCcEEEEEEecccc-hHHHHHHHHHHHHHhcCCCCceeeEeeEEEeCCeEEEE
Q 039514 698 DNFAENNIIGRGGFGSVYGARLE----DGMKIAIKVFHQQC-ASALKSFEAECEVLKKIRHRNLIKVISSCSNDDFKALV 772 (790)
Q Consensus 698 ~~~~~~~~ig~g~~g~v~~~~~~----~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~~~h~nlv~l~~~~~~~~~~~lv 772 (790)
.+|...+.||+|+||.||+|... +++.||||.++... ....++|.+|+.++.+++|||||++++++.+++..++|
T Consensus 45 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 124 (373)
T 2qol_A 45 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIV 124 (373)
T ss_dssp GGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEE
T ss_pred hhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEEE
Confidence 56888999999999999999853 56789999997643 34456799999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHhcC
Q 039514 773 LEYMSNGSLGDWLHSS 788 (790)
Q Consensus 773 ~e~~~~G~L~~~l~~~ 788 (790)
|||+++|+|.++++..
T Consensus 125 ~e~~~~~sL~~~l~~~ 140 (373)
T 2qol_A 125 TEYMENGSLDSFLRKH 140 (373)
T ss_dssp EECCTTCBHHHHHHTT
T ss_pred EeCCCCCcHHHHHHhC
Confidence 9999999999999764
No 179
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=99.22 E-value=2.8e-11 Score=129.70 Aligned_cols=92 Identities=21% Similarity=0.328 Sum_probs=82.8
Q ss_pred hcCccccceeccCCcEEEEEEE-EcCCcEEEEEEecccchHHHHHHHHHHHHHhcCCCCceeeEeeEEEeCCeEEEEEec
Q 039514 697 TDNFAENNIIGRGGFGSVYGAR-LEDGMKIAIKVFHQQCASALKSFEAECEVLKKIRHRNLIKVISSCSNDDFKALVLEY 775 (790)
Q Consensus 697 ~~~~~~~~~ig~g~~g~v~~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~~~h~nlv~l~~~~~~~~~~~lv~e~ 775 (790)
.+.|+..+.||+|+||.||+|. ..+|+.||+|.+..........+.+|+.++.+++|||||++++++.+.+..++||||
T Consensus 50 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E~ 129 (387)
T 1kob_A 50 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEF 129 (387)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEEC
T ss_pred ccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEEc
Confidence 4679999999999999999999 457899999999876555566789999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhcC
Q 039514 776 MSNGSLGDWLHSS 788 (790)
Q Consensus 776 ~~~G~L~~~l~~~ 788 (790)
+++|+|.+++...
T Consensus 130 ~~gg~L~~~l~~~ 142 (387)
T 1kob_A 130 LSGGELFDRIAAE 142 (387)
T ss_dssp CCCCBHHHHTTCT
T ss_pred CCCCcHHHHHHhh
Confidence 9999999998754
No 180
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=99.22 E-value=9e-12 Score=134.30 Aligned_cols=97 Identities=21% Similarity=0.346 Sum_probs=82.5
Q ss_pred HHHHHhcCccccceeccCCcEEEEEEEE-cCCcEEEEEEecccchH---HHHHHHHHHHHHhcCCCCceeeEeeEEEeCC
Q 039514 692 ELLQATDNFAENNIIGRGGFGSVYGARL-EDGMKIAIKVFHQQCAS---ALKSFEAECEVLKKIRHRNLIKVISSCSNDD 767 (790)
Q Consensus 692 ~~~~~~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~~~---~~~~~~~e~~~l~~~~h~nlv~l~~~~~~~~ 767 (790)
++....++|...++||+|+||.||+|+. .+++.||+|++.+.... ..+.+.+|+.++..++|||||++++++.+++
T Consensus 63 ~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~ 142 (410)
T 3v8s_A 63 DLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDR 142 (410)
T ss_dssp HHSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECSS
T ss_pred hcccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEECC
Confidence 3444567899999999999999999994 56899999999763321 1234788999999999999999999999999
Q ss_pred eEEEEEecCCCCCHHHHHhcC
Q 039514 768 FKALVLEYMSNGSLGDWLHSS 788 (790)
Q Consensus 768 ~~~lv~e~~~~G~L~~~l~~~ 788 (790)
..|+|||||++|+|.++++..
T Consensus 143 ~~~lV~E~~~gg~L~~~l~~~ 163 (410)
T 3v8s_A 143 YLYMVMEYMPGGDLVNLMSNY 163 (410)
T ss_dssp EEEEEECCCTTEEHHHHHHHC
T ss_pred EEEEEEeCCCCCcHHHHHHcC
Confidence 999999999999999998753
No 181
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=99.21 E-value=2.5e-11 Score=124.63 Aligned_cols=90 Identities=14% Similarity=0.110 Sum_probs=80.0
Q ss_pred cCccccceeccCCcEEEEEEEE-cCCcEEEEEEecccc---hHHHHHHHHHHHHHhcCCCCceeeEeeEEEeCCeEEEEE
Q 039514 698 DNFAENNIIGRGGFGSVYGARL-EDGMKIAIKVFHQQC---ASALKSFEAECEVLKKIRHRNLIKVISSCSNDDFKALVL 773 (790)
Q Consensus 698 ~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~~~h~nlv~l~~~~~~~~~~~lv~ 773 (790)
.+|...+.||+|+||.||+|.. .+++.||||.+.... ....+.+.+|+..+.+++||||+++++++..++..|+||
T Consensus 31 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 110 (286)
T 3uqc_A 31 GRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVVA 110 (286)
T ss_dssp TTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred CcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEEE
Confidence 5689999999999999999995 568999999997643 233467899999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhc
Q 039514 774 EYMSNGSLGDWLHS 787 (790)
Q Consensus 774 e~~~~G~L~~~l~~ 787 (790)
||+++|+|.++++.
T Consensus 111 e~~~g~~L~~~l~~ 124 (286)
T 3uqc_A 111 EWIRGGSLQEVADT 124 (286)
T ss_dssp ECCCEEEHHHHHTT
T ss_pred EecCCCCHHHHHhc
Confidence 99999999999864
No 182
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=99.21 E-value=3e-11 Score=123.06 Aligned_cols=90 Identities=30% Similarity=0.466 Sum_probs=80.7
Q ss_pred cCccccceeccCCcEEEEEEEEcCCcEEEEEEecccchHHHHHHHHHHHHHhcCCCCceeeEeeEEEeCCeEEEEEecCC
Q 039514 698 DNFAENNIIGRGGFGSVYGARLEDGMKIAIKVFHQQCASALKSFEAECEVLKKIRHRNLIKVISSCSNDDFKALVLEYMS 777 (790)
Q Consensus 698 ~~~~~~~~ig~g~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~~~h~nlv~l~~~~~~~~~~~lv~e~~~ 777 (790)
++|+..+.||+|+||.||+|...+++.||||.+...... .+++.+|++++.+++||||+++++++.+++..++||||++
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~-~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 88 (269)
T 4hcu_A 10 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMS-EEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFME 88 (269)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTSBC-HHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECCT
T ss_pred hhceeeheecCCCccEEEEEEecCCCeEEEEEecccccC-HHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEeCC
Confidence 568889999999999999999878889999999865432 3568899999999999999999999999999999999999
Q ss_pred CCCHHHHHhcC
Q 039514 778 NGSLGDWLHSS 788 (790)
Q Consensus 778 ~G~L~~~l~~~ 788 (790)
+|+|.++++..
T Consensus 89 ~~~L~~~l~~~ 99 (269)
T 4hcu_A 89 HGCLSDYLRTQ 99 (269)
T ss_dssp TCBHHHHHHTT
T ss_pred CCcHHHHHHhc
Confidence 99999999754
No 183
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=99.21 E-value=1.2e-11 Score=133.54 Aligned_cols=98 Identities=24% Similarity=0.385 Sum_probs=83.8
Q ss_pred HHHHHHHhcCccccceeccCCcEEEEEEEE-cCCcEEEEEEecccchH---HHHHHHHHHHHHhcCCCCceeeEeeEEEe
Q 039514 690 YLELLQATDNFAENNIIGRGGFGSVYGARL-EDGMKIAIKVFHQQCAS---ALKSFEAECEVLKKIRHRNLIKVISSCSN 765 (790)
Q Consensus 690 ~~~~~~~~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~~~---~~~~~~~e~~~l~~~~h~nlv~l~~~~~~ 765 (790)
+.+.....++|+..++||+|+||.||+++. .+|+.||||++++.... ..+.+.+|..++.+++|||||++++++.+
T Consensus 53 ~~~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~ 132 (412)
T 2vd5_A 53 LKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQD 132 (412)
T ss_dssp HHHHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEEC
T ss_pred hhhccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEee
Confidence 344445568899999999999999999995 57999999999764322 22347889999999999999999999999
Q ss_pred CCeEEEEEecCCCCCHHHHHhc
Q 039514 766 DDFKALVLEYMSNGSLGDWLHS 787 (790)
Q Consensus 766 ~~~~~lv~e~~~~G~L~~~l~~ 787 (790)
.+..|+|||||++|+|.+++++
T Consensus 133 ~~~~~lVmE~~~gg~L~~~l~~ 154 (412)
T 2vd5_A 133 ENYLYLVMEYYVGGDLLTLLSK 154 (412)
T ss_dssp SSEEEEEECCCCSCBHHHHHHH
T ss_pred CCEEEEEEcCCCCCcHHHHHHh
Confidence 9999999999999999999975
No 184
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=99.21 E-value=1.9e-11 Score=130.58 Aligned_cols=88 Identities=26% Similarity=0.473 Sum_probs=73.9
Q ss_pred cccceeccCCcEEEEEEE-EcCCcEEEEEEecccchHHHHHHHHHHHHHhcCCCCceeeEeeEEEeCCeEEEEEecCCCC
Q 039514 701 AENNIIGRGGFGSVYGAR-LEDGMKIAIKVFHQQCASALKSFEAECEVLKKIRHRNLIKVISSCSNDDFKALVLEYMSNG 779 (790)
Q Consensus 701 ~~~~~ig~g~~g~v~~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~~~h~nlv~l~~~~~~~~~~~lv~e~~~~G 779 (790)
...++||+|+||.||+|. ..+|+.||+|.++.......+++.+|++++.+++|||||++++++...+..++||||+++|
T Consensus 92 ~~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~~ 171 (373)
T 2x4f_A 92 SKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGG 171 (373)
T ss_dssp EEEEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTC
T ss_pred ecceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCC
Confidence 346789999999999998 4678999999998766666678999999999999999999999999999999999999999
Q ss_pred CHHHHHhcC
Q 039514 780 SLGDWLHSS 788 (790)
Q Consensus 780 ~L~~~l~~~ 788 (790)
+|.+++...
T Consensus 172 ~L~~~l~~~ 180 (373)
T 2x4f_A 172 ELFDRIIDE 180 (373)
T ss_dssp EEHHHHHHT
T ss_pred cHHHHHHhc
Confidence 999988653
No 185
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=99.20 E-value=3.4e-11 Score=126.30 Aligned_cols=91 Identities=27% Similarity=0.483 Sum_probs=78.8
Q ss_pred cCccccceeccCCcEEEEEEEEc----CCcEEEEEEeccc-chHHHHHHHHHHHHHhcCCCCceeeEeeEEEeCCeEEEE
Q 039514 698 DNFAENNIIGRGGFGSVYGARLE----DGMKIAIKVFHQQ-CASALKSFEAECEVLKKIRHRNLIKVISSCSNDDFKALV 772 (790)
Q Consensus 698 ~~~~~~~~ig~g~~g~v~~~~~~----~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~~~h~nlv~l~~~~~~~~~~~lv 772 (790)
.+|...+.||+|+||.||+|... .+..||||.+... .....+.+.+|+.++.+++||||+++++++.+++..++|
T Consensus 49 ~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 128 (325)
T 3kul_A 49 SRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIV 128 (325)
T ss_dssp GGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCEEE
T ss_pred hHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccEEE
Confidence 45778899999999999999953 3456999999764 334456799999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHhcC
Q 039514 773 LEYMSNGSLGDWLHSS 788 (790)
Q Consensus 773 ~e~~~~G~L~~~l~~~ 788 (790)
|||+++|+|.++++..
T Consensus 129 ~e~~~~~~L~~~l~~~ 144 (325)
T 3kul_A 129 TEYMENGSLDTFLRTH 144 (325)
T ss_dssp EECCTTCBHHHHHHTT
T ss_pred eeCCCCCcHHHHHHhc
Confidence 9999999999999653
No 186
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=99.20 E-value=2.3e-11 Score=129.03 Aligned_cols=90 Identities=20% Similarity=0.383 Sum_probs=79.1
Q ss_pred cCccccceeccCCcEEEEEEE-EcCCcEEEEEEecccchH-----HHHHHHHHHHHHhcCCCCceeeEeeEEEeCCeEEE
Q 039514 698 DNFAENNIIGRGGFGSVYGAR-LEDGMKIAIKVFHQQCAS-----ALKSFEAECEVLKKIRHRNLIKVISSCSNDDFKAL 771 (790)
Q Consensus 698 ~~~~~~~~ig~g~~g~v~~~~-~~~~~~vavK~~~~~~~~-----~~~~~~~e~~~l~~~~h~nlv~l~~~~~~~~~~~l 771 (790)
+.|...+.||+|+||.||+|. ..+++.||||.+...... ..+.+.+|+.++..++|||||++++++.+++..|+
T Consensus 24 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~l 103 (351)
T 3c0i_A 24 DVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYM 103 (351)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred cceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEE
Confidence 568899999999999999998 467899999999653221 34678999999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHhc
Q 039514 772 VLEYMSNGSLGDWLHS 787 (790)
Q Consensus 772 v~e~~~~G~L~~~l~~ 787 (790)
|||||++|+|.+++..
T Consensus 104 v~e~~~g~~L~~~l~~ 119 (351)
T 3c0i_A 104 VFEFMDGADLCFEIVK 119 (351)
T ss_dssp EEECCSSCBHHHHHHH
T ss_pred EEeCCCCCCHHHHHHH
Confidence 9999999999988754
No 187
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=99.20 E-value=4.3e-11 Score=125.13 Aligned_cols=91 Identities=19% Similarity=0.285 Sum_probs=80.7
Q ss_pred hcCccccceeccCCcEEEEEEE-EcCCcEEEEEEecccchHHHHHHHHHHHHHhcCCCCceeeEeeEEEeCCeEEEEEec
Q 039514 697 TDNFAENNIIGRGGFGSVYGAR-LEDGMKIAIKVFHQQCASALKSFEAECEVLKKIRHRNLIKVISSCSNDDFKALVLEY 775 (790)
Q Consensus 697 ~~~~~~~~~ig~g~~g~v~~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~~~h~nlv~l~~~~~~~~~~~lv~e~ 775 (790)
.++|...+.||+|+||.||+|. ..+++.||+|.+.... .....+.+|+.++..++||||+++++++.+.+..++||||
T Consensus 4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~ 82 (321)
T 1tki_A 4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG-TDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEF 82 (321)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT-HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECC
T ss_pred hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCc-ccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEEe
Confidence 4678899999999999999999 4578999999997543 3345688999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhcC
Q 039514 776 MSNGSLGDWLHSS 788 (790)
Q Consensus 776 ~~~G~L~~~l~~~ 788 (790)
+++|+|.+++...
T Consensus 83 ~~g~~L~~~l~~~ 95 (321)
T 1tki_A 83 ISGLDIFERINTS 95 (321)
T ss_dssp CCCCBHHHHHTSS
T ss_pred CCCCCHHHHHHhc
Confidence 9999999999754
No 188
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=99.20 E-value=3.9e-11 Score=124.77 Aligned_cols=92 Identities=30% Similarity=0.502 Sum_probs=81.1
Q ss_pred HhcCccccceeccCCcEEEEEEEEcCCcEEEEEEecccc--hHHHHHHHHHHHHHhcCCCCceeeEeeEEEeCCeEEEEE
Q 039514 696 ATDNFAENNIIGRGGFGSVYGARLEDGMKIAIKVFHQQC--ASALKSFEAECEVLKKIRHRNLIKVISSCSNDDFKALVL 773 (790)
Q Consensus 696 ~~~~~~~~~~ig~g~~g~v~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~~~h~nlv~l~~~~~~~~~~~lv~ 773 (790)
...+|+..+.||+|+||.||+|.. +|+.||||.+.... ....+++.+|++++++++||||+++++++...+..++||
T Consensus 35 ~~~~y~i~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 113 (309)
T 3p86_A 35 PWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVT 113 (309)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEE-TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCEEEE
T ss_pred ChhHceeeeEeecCCCeEEEEEEE-CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceEEEE
Confidence 456788899999999999999976 58899999997543 334567899999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhcC
Q 039514 774 EYMSNGSLGDWLHSS 788 (790)
Q Consensus 774 e~~~~G~L~~~l~~~ 788 (790)
||+++|+|.++++..
T Consensus 114 e~~~~~~L~~~l~~~ 128 (309)
T 3p86_A 114 EYLSRGSLYRLLHKS 128 (309)
T ss_dssp ECCTTCBHHHHHHST
T ss_pred ecCCCCcHHHHHhhc
Confidence 999999999999764
No 189
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=99.20 E-value=2.4e-09 Score=115.37 Aligned_cols=133 Identities=11% Similarity=0.133 Sum_probs=73.8
Q ss_pred CccccCCCCCCeeeccCCccccccCcccccCCCCceEeccCCcccccccccccccccCceEeCcCCcccccCcccccCCc
Q 039514 449 PSCVSNLTSLRYLYLGSNRFTFVIPSTFWSLKDILFFDFSSNFLVGTLSFDIGNLKVLLGINLSENNLSGDMPATIGGLK 528 (790)
Q Consensus 449 p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~ 528 (790)
..+|.++.+|+.+.+..+.. .+...+|..+..|+.+.+. +.++......|.++.+|+.++|..+ ++.+...+|.++.
T Consensus 258 ~~aF~~c~~L~~i~lp~~~~-~I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~ 334 (394)
T 4gt6_A 258 THAFDSCAYLASVKMPDSVV-SIGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCE 334 (394)
T ss_dssp TTTTTTCSSCCEEECCTTCC-EECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCT
T ss_pred cceeeecccccEEecccccc-eecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCC
Confidence 44566677777777655432 3455566666666666664 3344455556666666666666543 5555566677777
Q ss_pred ccCeeeCCCCcccccCCccccCCCCCCEEECCCCcCcccCCccccccCCCCeEeCCCCcc
Q 039514 529 DLQFMDLAYNRLEGPIPESFGDLTSLEVLNLSKNKISGSIPKSMEKLFYLRELNLSFNEL 588 (790)
Q Consensus 529 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 588 (790)
+|+.+.+..+ ++.+...+|.++++|+.+++.++.... ..+.....|+.+.+..|.+
T Consensus 335 ~L~~i~ip~s-v~~I~~~aF~~C~~L~~i~~~~~~~~~---~~~~~~~~L~~i~i~~~~~ 390 (394)
T 4gt6_A 335 QLERIAIPSS-VTKIPESAFSNCTALNNIEYSGSRSQW---NAISTDSGLQNLPVAPGSI 390 (394)
T ss_dssp TCCEEEECTT-CCBCCGGGGTTCTTCCEEEESSCHHHH---HTCBCCCCC----------
T ss_pred CCCEEEECcc-cCEEhHhHhhCCCCCCEEEECCceeeh---hhhhccCCCCEEEeCCCCE
Confidence 7777776543 554555667777777777776664331 3455556666666555443
No 190
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.20 E-value=5.6e-13 Score=141.76 Aligned_cols=190 Identities=18% Similarity=0.151 Sum_probs=91.8
Q ss_pred ccCcEEEeecCcCcccCchhhhcc-----CCcceeeeccccccCcccccc-ccccccCeEEeeccccCccCCcccccccc
Q 039514 360 KSLETLVIANCSISGNIPQAISNL-----SNLLTLVLERNKLTGPISITF-GRLQKLQGLYLASNNLVGSFPDELCHIGR 433 (790)
Q Consensus 360 ~~L~~L~l~~n~l~~~~p~~~~~l-----~~L~~L~L~~N~l~~~~~~~~-~~l~~L~~L~L~~n~l~~~~~~~~~~l~~ 433 (790)
+.|+.|++++|.++......+... ++|++|+|++|.++......+ ..+++|+.|+|++|.++......++
T Consensus 72 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~---- 147 (372)
T 3un9_A 72 SSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLR---- 147 (372)
T ss_dssp TTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHH----
T ss_pred hhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHH----
Confidence 467777777777765444444332 567777777776654322222 2344556666666655422111111
Q ss_pred ccceecccCcccccCCccc-cCCCCCCeeeccCCccccccCcccccCCCCceEeccCCcccccccccccccccCceEeCc
Q 039514 434 LAELALLDNRHSGSIPSCV-SNLTSLRYLYLGSNRFTFVIPSTFWSLKDILFFDFSSNFLVGTLSFDIGNLKVLLGINLS 512 (790)
Q Consensus 434 L~~L~l~~n~~~~~~p~~~-~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls 512 (790)
..+ ...++|++|+|++|.++...... ++..+...+.|++|+|+
T Consensus 148 ----------------~~L~~~~~~L~~L~Ls~n~l~~~~~~~--------------------l~~~L~~~~~L~~L~Ls 191 (372)
T 3un9_A 148 ----------------DLLLHDQCQITTLRLSNNPLTAAGVAV--------------------LMEGLAGNTSVTHLSLL 191 (372)
T ss_dssp ----------------HHHHSTTCCCCEEECCSSCCHHHHHHH--------------------HHHHHHTCSSCCEEECT
T ss_pred ----------------HHHHhcCCccceeeCCCCCCChHHHHH--------------------HHHHHhcCCCcCEEeCC
Confidence 111 12345666666666654321111 11112233444444455
Q ss_pred CCccccc----CcccccCCcccCeeeCCCCcccccC----CccccCCCCCCEEECCCCcCcccCCccccccC-----CCC
Q 039514 513 ENNLSGD----MPATIGGLKDLQFMDLAYNRLEGPI----PESFGDLTSLEVLNLSKNKISGSIPKSMEKLF-----YLR 579 (790)
Q Consensus 513 ~N~l~~~----~~~~~~~l~~L~~L~Ls~N~l~~~~----p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~-----~L~ 579 (790)
+|.|... ++..+...++|+.|+|++|.|+... +..+...++|++|+|++|.|+......+..+. .|+
T Consensus 192 ~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~l~~~L~~~~~L~~L~Ls~N~i~~~g~~~L~~~~~~~~~~L~ 271 (372)
T 3un9_A 192 HTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALALARAAREHPSLELLHLYFNELSSEGRQVLRDLGGAAEGGAR 271 (372)
T ss_dssp TSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHHHHHHHHHCSSCCEEECTTSSCCHHHHHHHHHCC------CE
T ss_pred CCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHHHHHHHHhCCCCCEEeccCCCCCHHHHHHHHHHhcCCCccch
Confidence 5444321 2334445556666666666665422 23334456777777777777654333333321 155
Q ss_pred eEe--CCCCcce
Q 039514 580 ELN--LSFNELE 589 (790)
Q Consensus 580 ~L~--Ls~N~l~ 589 (790)
.+. +..|.++
T Consensus 272 ~l~~ll~~~~~~ 283 (372)
T 3un9_A 272 VVVSLTEGTAVS 283 (372)
T ss_dssp EECCCC----CH
T ss_pred hhHhhhcCCccC
Confidence 665 5555554
No 191
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=99.20 E-value=3.6e-11 Score=126.63 Aligned_cols=92 Identities=23% Similarity=0.429 Sum_probs=77.8
Q ss_pred hcCccccceeccCCcEEEEEEEE-cCCcEEEEEEecccc-hHHHHHHHHHHHHHhcCCCCceeeEeeEEEeCC-------
Q 039514 697 TDNFAENNIIGRGGFGSVYGARL-EDGMKIAIKVFHQQC-ASALKSFEAECEVLKKIRHRNLIKVISSCSNDD------- 767 (790)
Q Consensus 697 ~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~~~h~nlv~l~~~~~~~~------- 767 (790)
.++|+..+.||+|+||.||+|+. .+|+.||||++.... ....+.+.+|++++++++|||||++++++.+.+
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~ 84 (332)
T 3qd2_B 5 LTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEE 84 (332)
T ss_dssp HHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHH
T ss_pred hhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhh
Confidence 35688999999999999999995 479999999997533 334567999999999999999999999986543
Q ss_pred --------------------------------------------------eEEEEEecCCCCCHHHHHhcC
Q 039514 768 --------------------------------------------------FKALVLEYMSNGSLGDWLHSS 788 (790)
Q Consensus 768 --------------------------------------------------~~~lv~e~~~~G~L~~~l~~~ 788 (790)
..++||||+++|+|.++++..
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~ 155 (332)
T 3qd2_B 85 MDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRR 155 (332)
T ss_dssp HHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTC
T ss_pred hhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcc
Confidence 389999999999999998764
No 192
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=99.19 E-value=2.7e-11 Score=126.31 Aligned_cols=92 Identities=22% Similarity=0.367 Sum_probs=80.6
Q ss_pred hcCccccceeccCCcEEEEEEE-EcCCcEEEEEEecccch---HHHHHHHHHHHHHhcCCCCceeeEeeEEEeCCeEEEE
Q 039514 697 TDNFAENNIIGRGGFGSVYGAR-LEDGMKIAIKVFHQQCA---SALKSFEAECEVLKKIRHRNLIKVISSCSNDDFKALV 772 (790)
Q Consensus 697 ~~~~~~~~~ig~g~~g~v~~~~-~~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~~~h~nlv~l~~~~~~~~~~~lv 772 (790)
.++|+..+.||+|+||.||+++ ..+|+.||+|.++.... ...+.+.+|+.++..++||||+++++++.+.+..|+|
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv 84 (318)
T 1fot_A 5 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMI 84 (318)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEE
T ss_pred hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEE
Confidence 3678899999999999999999 45799999999976432 2345678899999999999999999999999999999
Q ss_pred EecCCCCCHHHHHhcC
Q 039514 773 LEYMSNGSLGDWLHSS 788 (790)
Q Consensus 773 ~e~~~~G~L~~~l~~~ 788 (790)
|||+++|+|.++++..
T Consensus 85 ~e~~~gg~L~~~l~~~ 100 (318)
T 1fot_A 85 MDYIEGGELFSLLRKS 100 (318)
T ss_dssp ECCCCSCBHHHHHHHT
T ss_pred EeCCCCCCHHHHHHHc
Confidence 9999999999999764
No 193
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=99.19 E-value=3e-11 Score=129.06 Aligned_cols=92 Identities=27% Similarity=0.585 Sum_probs=80.0
Q ss_pred hcCccccceeccCCcEEEEEEEE--------cCCcEEEEEEecccc-hHHHHHHHHHHHHHhcC-CCCceeeEeeEEEeC
Q 039514 697 TDNFAENNIIGRGGFGSVYGARL--------EDGMKIAIKVFHQQC-ASALKSFEAECEVLKKI-RHRNLIKVISSCSND 766 (790)
Q Consensus 697 ~~~~~~~~~ig~g~~g~v~~~~~--------~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~~-~h~nlv~l~~~~~~~ 766 (790)
.++|...+.||+|+||.||+|+. .+++.||||.++... ....+++.+|+.++.++ +|||||+++++|.++
T Consensus 80 ~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~ 159 (370)
T 2psq_A 80 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 159 (370)
T ss_dssp GGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSS
T ss_pred HHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccC
Confidence 46788899999999999999984 234679999997643 34456799999999999 899999999999999
Q ss_pred CeEEEEEecCCCCCHHHHHhcC
Q 039514 767 DFKALVLEYMSNGSLGDWLHSS 788 (790)
Q Consensus 767 ~~~~lv~e~~~~G~L~~~l~~~ 788 (790)
+..|+||||+++|+|.++++..
T Consensus 160 ~~~~lv~e~~~~g~L~~~l~~~ 181 (370)
T 2psq_A 160 GPLYVIVEYASKGNLREYLRAR 181 (370)
T ss_dssp SSCEEEEECCTTCBHHHHHHHT
T ss_pred CCEEEEEEcCCCCCHHHHHHhh
Confidence 9999999999999999999864
No 194
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=99.19 E-value=4e-11 Score=123.77 Aligned_cols=92 Identities=28% Similarity=0.480 Sum_probs=80.7
Q ss_pred hcCccccceeccCCcEEEEEEE-EcCCcEEEEEEeccc---chHHHHHHHHHHHHHhcCCCCceeeEeeEEEeCCeEEEE
Q 039514 697 TDNFAENNIIGRGGFGSVYGAR-LEDGMKIAIKVFHQQ---CASALKSFEAECEVLKKIRHRNLIKVISSCSNDDFKALV 772 (790)
Q Consensus 697 ~~~~~~~~~ig~g~~g~v~~~~-~~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~~~h~nlv~l~~~~~~~~~~~lv 772 (790)
.++|...+.||+|+||.||+|. ..+++.||+|.+... .....+.+.+|+..+.+++||||+++++++..++..|+|
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 89 (294)
T 4eqm_A 10 NERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLV 89 (294)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEE
T ss_pred hccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEE
Confidence 3568899999999999999999 567899999998542 233456789999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHhcC
Q 039514 773 LEYMSNGSLGDWLHSS 788 (790)
Q Consensus 773 ~e~~~~G~L~~~l~~~ 788 (790)
|||+++|+|.+++...
T Consensus 90 ~e~~~g~~L~~~l~~~ 105 (294)
T 4eqm_A 90 MEYIEGPTLSEYIESH 105 (294)
T ss_dssp EECCCSCBHHHHHHHH
T ss_pred EeCCCCCCHHHHHHhc
Confidence 9999999999998753
No 195
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=99.19 E-value=3.4e-11 Score=126.32 Aligned_cols=91 Identities=27% Similarity=0.444 Sum_probs=80.1
Q ss_pred cCccccceeccCCcEEEEEEE-EcCCcEEEEEEecccchH------HHHHHHHHHHHHhcCCCCceeeEeeEEEeCCeEE
Q 039514 698 DNFAENNIIGRGGFGSVYGAR-LEDGMKIAIKVFHQQCAS------ALKSFEAECEVLKKIRHRNLIKVISSCSNDDFKA 770 (790)
Q Consensus 698 ~~~~~~~~ig~g~~g~v~~~~-~~~~~~vavK~~~~~~~~------~~~~~~~e~~~l~~~~h~nlv~l~~~~~~~~~~~ 770 (790)
+.|...+.||+|+||.||+|. ..+|+.||||.+...... ..+.+.+|+.++.+++||||+++++++...+..+
T Consensus 11 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~ 90 (326)
T 2y0a_A 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVI 90 (326)
T ss_dssp HHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred cceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence 558889999999999999999 457899999999754321 3567889999999999999999999999999999
Q ss_pred EEEecCCCCCHHHHHhcC
Q 039514 771 LVLEYMSNGSLGDWLHSS 788 (790)
Q Consensus 771 lv~e~~~~G~L~~~l~~~ 788 (790)
+||||+++|+|.+++...
T Consensus 91 lv~e~~~~~~L~~~l~~~ 108 (326)
T 2y0a_A 91 LILELVAGGELFDFLAEK 108 (326)
T ss_dssp EEEECCCSCBHHHHHTTS
T ss_pred EEEEcCCCCCHHHHHHhc
Confidence 999999999999998754
No 196
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=99.19 E-value=3.6e-11 Score=127.96 Aligned_cols=92 Identities=23% Similarity=0.473 Sum_probs=81.3
Q ss_pred hcCccccceeccCCcEEEEEEE-EcCCcEEEEEEecccc--hHHHHHHHHHHHHHhcCCCCceeeEeeEEEeCCeEEEEE
Q 039514 697 TDNFAENNIIGRGGFGSVYGAR-LEDGMKIAIKVFHQQC--ASALKSFEAECEVLKKIRHRNLIKVISSCSNDDFKALVL 773 (790)
Q Consensus 697 ~~~~~~~~~ig~g~~g~v~~~~-~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~~~h~nlv~l~~~~~~~~~~~lv~ 773 (790)
.++|...+.||+|+||.||+|. ..+|+.||||.+.... ....+.+.+|+.++++++|||||++++++.+++..|+||
T Consensus 28 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~ 107 (362)
T 2bdw_A 28 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF 107 (362)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred ccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 4679999999999999999998 4578999999997543 334567889999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhcC
Q 039514 774 EYMSNGSLGDWLHSS 788 (790)
Q Consensus 774 e~~~~G~L~~~l~~~ 788 (790)
||+++|+|.+++...
T Consensus 108 e~~~gg~L~~~l~~~ 122 (362)
T 2bdw_A 108 DLVTGGELFEDIVAR 122 (362)
T ss_dssp CCCCSCBHHHHHTTC
T ss_pred ecCCCCCHHHHHHHc
Confidence 999999999998754
No 197
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=99.19 E-value=3.4e-11 Score=124.10 Aligned_cols=92 Identities=24% Similarity=0.447 Sum_probs=81.2
Q ss_pred hcCccccceeccCCcEEEEEEE-EcCC-------cEEEEEEecccchHHHHHHHHHHHHHhcCCCCceeeEeeEEEeCCe
Q 039514 697 TDNFAENNIIGRGGFGSVYGAR-LEDG-------MKIAIKVFHQQCASALKSFEAECEVLKKIRHRNLIKVISSCSNDDF 768 (790)
Q Consensus 697 ~~~~~~~~~ig~g~~g~v~~~~-~~~~-------~~vavK~~~~~~~~~~~~~~~e~~~l~~~~h~nlv~l~~~~~~~~~ 768 (790)
.++|...+.||+|+||.||+|. ..++ +.||+|.+........+.+.+|+.++++++||||+++++++..++.
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 86 (289)
T 4fvq_A 7 NEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDE 86 (289)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTTC
T ss_pred hhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCCC
Confidence 3568889999999999999998 3344 4799999987666666789999999999999999999999999999
Q ss_pred EEEEEecCCCCCHHHHHhcC
Q 039514 769 KALVLEYMSNGSLGDWLHSS 788 (790)
Q Consensus 769 ~~lv~e~~~~G~L~~~l~~~ 788 (790)
.++||||+++|+|.++++..
T Consensus 87 ~~lv~e~~~~~~L~~~l~~~ 106 (289)
T 4fvq_A 87 NILVQEFVKFGSLDTYLKKN 106 (289)
T ss_dssp CEEEEECCTTCBHHHHHHHT
T ss_pred CEEEEECCCCCCHHHHHHhC
Confidence 99999999999999999764
No 198
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=99.18 E-value=1.9e-11 Score=131.07 Aligned_cols=91 Identities=26% Similarity=0.538 Sum_probs=80.4
Q ss_pred hcCccccceeccCCcEEEEEEEEc-CCcEEEEEEecccch-HHHHHHHHHHHHHhcCCCCceeeEeeEEEeCCeEEEEEe
Q 039514 697 TDNFAENNIIGRGGFGSVYGARLE-DGMKIAIKVFHQQCA-SALKSFEAECEVLKKIRHRNLIKVISSCSNDDFKALVLE 774 (790)
Q Consensus 697 ~~~~~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~~~h~nlv~l~~~~~~~~~~~lv~e 774 (790)
.++|...+.||+|+||.||+|... +++.||||.++.... ...++|.+|+++|++++|||||+++|+|..++..++|||
T Consensus 113 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 192 (377)
T 3cbl_A 113 HEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVME 192 (377)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred hHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEEEE
Confidence 467888999999999999999964 789999999975432 334568899999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhc
Q 039514 775 YMSNGSLGDWLHS 787 (790)
Q Consensus 775 ~~~~G~L~~~l~~ 787 (790)
|+++|+|.++++.
T Consensus 193 ~~~~g~L~~~l~~ 205 (377)
T 3cbl_A 193 LVQGGDFLTFLRT 205 (377)
T ss_dssp CCTTCBHHHHHHH
T ss_pred cCCCCCHHHHHHh
Confidence 9999999999875
No 199
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.18 E-value=1.5e-12 Score=138.37 Aligned_cols=189 Identities=17% Similarity=0.171 Sum_probs=108.8
Q ss_pred CCCCCEEEccCCCCcccCCchhhhh----cccCcEEEeecCcCcccCchhh-hccCCcceeeeccccccCccccccc---
Q 039514 334 CKKLRSLKLAGNPLDGFLPSSIGNL----SKSLETLVIANCSISGNIPQAI-SNLSNLLTLVLERNKLTGPISITFG--- 405 (790)
Q Consensus 334 l~~L~~L~Ls~n~l~~~~p~~~~~l----~~~L~~L~l~~n~l~~~~p~~~-~~l~~L~~L~L~~N~l~~~~~~~~~--- 405 (790)
++.|+.|++++|.++......+... ..+|++|+|++|.++......+ ..+++|+.|+|++|.++......+.
T Consensus 71 ~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L 150 (372)
T 3un9_A 71 LSSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLL 150 (372)
T ss_dssp HTTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHH
T ss_pred HhhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHH
Confidence 3679999999999986544444433 2489999999999975544333 4578999999999999765444432
Q ss_pred --cccccCeEEeeccccCccCCccccccccccceecccCcccccCCccccCCCCCCeeeccCCcccccc----CcccccC
Q 039514 406 --RLQKLQGLYLASNNLVGSFPDELCHIGRLAELALLDNRHSGSIPSCVSNLTSLRYLYLGSNRFTFVI----PSTFWSL 479 (790)
Q Consensus 406 --~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~L~~N~l~~~~----~~~~~~l 479 (790)
..++|+.|+|++|.++..... .++..+..+++|++|+|++|.++... +..+...
T Consensus 151 ~~~~~~L~~L~Ls~n~l~~~~~~--------------------~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~ 210 (372)
T 3un9_A 151 LHDQCQITTLRLSNNPLTAAGVA--------------------VLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRN 210 (372)
T ss_dssp HSTTCCCCEEECCSSCCHHHHHH--------------------HHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGC
T ss_pred HhcCCccceeeCCCCCCChHHHH--------------------HHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcC
Confidence 346677888877776531111 12334455667777777777765422 2223333
Q ss_pred CCCceEeccCCcccccccccccccccCceEeCcCCccccc----CcccccCCcccCeeeCCCCcccccCCccccCC---C
Q 039514 480 KDILFFDFSSNFLVGTLSFDIGNLKVLLGINLSENNLSGD----MPATIGGLKDLQFMDLAYNRLEGPIPESFGDL---T 552 (790)
Q Consensus 480 ~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~----~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l---~ 552 (790)
+ .|+.|+|++|.|+.. +...+...++|++|+|++|.|+......+..+ .
T Consensus 211 ~------------------------~L~~L~Ls~N~i~~~g~~~l~~~L~~~~~L~~L~Ls~N~i~~~g~~~L~~~~~~~ 266 (372)
T 3un9_A 211 R------------------------QLQELNVAYNGAGDTAALALARAAREHPSLELLHLYFNELSSEGRQVLRDLGGAA 266 (372)
T ss_dssp S------------------------CCCEEECCSSCCCHHHHHHHHHHHHHCSSCCEEECTTSSCCHHHHHHHHHCC---
T ss_pred C------------------------CcCeEECCCCCCCHHHHHHHHHHHHhCCCCCEEeccCCCCCHHHHHHHHHHhcCC
Confidence 3 344444444444322 22233344566666666666654433333222 1
Q ss_pred --CCCEEE--CCCCcCcc
Q 039514 553 --SLEVLN--LSKNKISG 566 (790)
Q Consensus 553 --~L~~L~--L~~N~l~~ 566 (790)
.|+.+. +..|.+..
T Consensus 267 ~~~L~~l~~ll~~~~~~~ 284 (372)
T 3un9_A 267 EGGARVVVSLTEGTAVSE 284 (372)
T ss_dssp ---CEEECCCC----CHH
T ss_pred CccchhhHhhhcCCccCH
Confidence 166666 66666653
No 200
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=99.18 E-value=3.2e-11 Score=124.66 Aligned_cols=92 Identities=32% Similarity=0.562 Sum_probs=80.5
Q ss_pred hcCccccceeccCCcEEEEEEEE-----cCCcEEEEEEecccchHHHHHHHHHHHHHhcCCCCceeeEeeEEEe--CCeE
Q 039514 697 TDNFAENNIIGRGGFGSVYGARL-----EDGMKIAIKVFHQQCASALKSFEAECEVLKKIRHRNLIKVISSCSN--DDFK 769 (790)
Q Consensus 697 ~~~~~~~~~ig~g~~g~v~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~~~h~nlv~l~~~~~~--~~~~ 769 (790)
.++|+..+.||+|+||.||+|++ .+++.||||++........+.+.+|++++.+++||||+++++++.. ....
T Consensus 9 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 88 (295)
T 3ugc_A 9 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNL 88 (295)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTSC
T ss_pred HHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCce
Confidence 36788899999999999999984 3678999999987766666789999999999999999999999865 3568
Q ss_pred EEEEecCCCCCHHHHHhcC
Q 039514 770 ALVLEYMSNGSLGDWLHSS 788 (790)
Q Consensus 770 ~lv~e~~~~G~L~~~l~~~ 788 (790)
++||||+++|+|.++++..
T Consensus 89 ~lv~e~~~~~~L~~~l~~~ 107 (295)
T 3ugc_A 89 KLIMEYLPYGSLRDYLQKH 107 (295)
T ss_dssp EEEEECCTTCBHHHHHHHC
T ss_pred EEEEEeCCCCCHHHHHHhc
Confidence 9999999999999999763
No 201
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=99.17 E-value=5.3e-11 Score=125.64 Aligned_cols=91 Identities=23% Similarity=0.364 Sum_probs=79.5
Q ss_pred cCccccceeccCCcEEEEEEEE-cCCcEEEEEEecccc---hHHHHHHHHHHHHHhcC-CCCceeeEeeEEEeCCeEEEE
Q 039514 698 DNFAENNIIGRGGFGSVYGARL-EDGMKIAIKVFHQQC---ASALKSFEAECEVLKKI-RHRNLIKVISSCSNDDFKALV 772 (790)
Q Consensus 698 ~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~~-~h~nlv~l~~~~~~~~~~~lv 772 (790)
++|...+.||+|+||.||+|+. .+++.||||.+.... ....+.+.+|..++.++ +|||||++++++.+.+..|+|
T Consensus 9 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv 88 (345)
T 3a8x_A 9 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFV 88 (345)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEEE
Confidence 5688999999999999999994 568999999997643 23345688999999988 899999999999999999999
Q ss_pred EecCCCCCHHHHHhcC
Q 039514 773 LEYMSNGSLGDWLHSS 788 (790)
Q Consensus 773 ~e~~~~G~L~~~l~~~ 788 (790)
|||+++|+|.++++..
T Consensus 89 ~e~~~gg~L~~~l~~~ 104 (345)
T 3a8x_A 89 IEYVNGGDLMFHMQRQ 104 (345)
T ss_dssp ECCCCSCBHHHHHHHH
T ss_pred EeCCCCCcHHHHHHHc
Confidence 9999999999998753
No 202
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=99.17 E-value=4.1e-11 Score=126.86 Aligned_cols=93 Identities=27% Similarity=0.394 Sum_probs=79.7
Q ss_pred HhcCccccceeccCCcEEEEEEE-EcCCcEEEEEEecccch---HHHHHHHHHHHHHhcC-CCCceeeEeeEEEeCCeEE
Q 039514 696 ATDNFAENNIIGRGGFGSVYGAR-LEDGMKIAIKVFHQQCA---SALKSFEAECEVLKKI-RHRNLIKVISSCSNDDFKA 770 (790)
Q Consensus 696 ~~~~~~~~~~ig~g~~g~v~~~~-~~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~~-~h~nlv~l~~~~~~~~~~~ 770 (790)
..++|+..++||+|+||.||+|+ ..+++.||||+++.... ...+.+.+|..++..+ +|||||++++++.+.+..|
T Consensus 21 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~ 100 (353)
T 3txo_A 21 GIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLF 100 (353)
T ss_dssp --CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEE
T ss_pred chhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEE
Confidence 35789999999999999999999 45789999999976432 2345678899999988 6999999999999999999
Q ss_pred EEEecCCCCCHHHHHhcC
Q 039514 771 LVLEYMSNGSLGDWLHSS 788 (790)
Q Consensus 771 lv~e~~~~G~L~~~l~~~ 788 (790)
+||||+++|+|.++++..
T Consensus 101 lv~E~~~gg~L~~~l~~~ 118 (353)
T 3txo_A 101 FVMEFVNGGDLMFHIQKS 118 (353)
T ss_dssp EEEECCCSCBHHHHHHHH
T ss_pred EEEeCCCCCcHHHHHHHc
Confidence 999999999999998753
No 203
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=99.17 E-value=4e-11 Score=127.01 Aligned_cols=94 Identities=24% Similarity=0.426 Sum_probs=82.3
Q ss_pred HHHHhcCccccceeccCCcEEEEEEE-EcCCcEEEEEEecccc-----hHHHHHHHHHHHHHhcCCCCceeeEeeEEEeC
Q 039514 693 LLQATDNFAENNIIGRGGFGSVYGAR-LEDGMKIAIKVFHQQC-----ASALKSFEAECEVLKKIRHRNLIKVISSCSND 766 (790)
Q Consensus 693 ~~~~~~~~~~~~~ig~g~~g~v~~~~-~~~~~~vavK~~~~~~-----~~~~~~~~~e~~~l~~~~h~nlv~l~~~~~~~ 766 (790)
+....++|...+.||+|+||.||+|. ..+++.||+|.+.... ....+.+.+|++++.+++|||||++++++.+.
T Consensus 21 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~ 100 (345)
T 3hko_A 21 LLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDE 100 (345)
T ss_dssp HHHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred hhhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccC
Confidence 34566789999999999999999999 4678899999997542 23456789999999999999999999999999
Q ss_pred CeEEEEEecCCCCCHHHHHh
Q 039514 767 DFKALVLEYMSNGSLGDWLH 786 (790)
Q Consensus 767 ~~~~lv~e~~~~G~L~~~l~ 786 (790)
+..++||||+++|+|.+++.
T Consensus 101 ~~~~lv~e~~~gg~L~~~l~ 120 (345)
T 3hko_A 101 QYICLVMELCHGGHLLDKLN 120 (345)
T ss_dssp SEEEEEEECCCSCBHHHHEE
T ss_pred CeEEEEEeCCCCCcHHHHHH
Confidence 99999999999999999985
No 204
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=99.17 E-value=4e-11 Score=122.65 Aligned_cols=92 Identities=24% Similarity=0.377 Sum_probs=81.6
Q ss_pred hcCccccceeccCCcEEEEEEEE-cCCcEEEEEEecccchHHHHHHHHHHHHHhcCCCCceeeEeeEEEeCCeEEEEEec
Q 039514 697 TDNFAENNIIGRGGFGSVYGARL-EDGMKIAIKVFHQQCASALKSFEAECEVLKKIRHRNLIKVISSCSNDDFKALVLEY 775 (790)
Q Consensus 697 ~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~~~h~nlv~l~~~~~~~~~~~lv~e~ 775 (790)
.++|...+.||+|+||.||+|.. .+++.||+|.+........+.+.+|++++.+++||||+++++++..++..++||||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 87 (277)
T 3f3z_A 8 NQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMEL 87 (277)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred hhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEec
Confidence 35688999999999999999994 56789999999775555567889999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhcC
Q 039514 776 MSNGSLGDWLHSS 788 (790)
Q Consensus 776 ~~~G~L~~~l~~~ 788 (790)
+++|+|.+++...
T Consensus 88 ~~~~~L~~~~~~~ 100 (277)
T 3f3z_A 88 CTGGELFERVVHK 100 (277)
T ss_dssp CCSCBHHHHHHHH
T ss_pred cCCCcHHHHHHHc
Confidence 9999999988653
No 205
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=99.16 E-value=4.3e-11 Score=126.73 Aligned_cols=91 Identities=27% Similarity=0.364 Sum_probs=74.1
Q ss_pred HhcCccccceeccCCcEEEEEEEE-cCCcEEEEEEecccchHHHHHHHHHHHHHhcCCCCceeeEeeEEEeCCeEEEEEe
Q 039514 696 ATDNFAENNIIGRGGFGSVYGARL-EDGMKIAIKVFHQQCASALKSFEAECEVLKKIRHRNLIKVISSCSNDDFKALVLE 774 (790)
Q Consensus 696 ~~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~~~h~nlv~l~~~~~~~~~~~lv~e 774 (790)
..+.|...+.||+|+||.||+|.. .+++.||||.+.... ..+.+.+|++++.+++||||+++++++...+..++|||
T Consensus 51 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 128 (349)
T 2w4o_A 51 LSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV--DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLE 128 (349)
T ss_dssp GGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC------------CHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred ccCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch--hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEEE
Confidence 346788999999999999999995 468899999997643 33567899999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhcC
Q 039514 775 YMSNGSLGDWLHSS 788 (790)
Q Consensus 775 ~~~~G~L~~~l~~~ 788 (790)
|+++|+|.+++...
T Consensus 129 ~~~~~~L~~~l~~~ 142 (349)
T 2w4o_A 129 LVTGGELFDRIVEK 142 (349)
T ss_dssp CCCSCBHHHHHTTC
T ss_pred eCCCCCHHHHHHhc
Confidence 99999999998764
No 206
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=99.16 E-value=4.8e-11 Score=127.45 Aligned_cols=91 Identities=21% Similarity=0.355 Sum_probs=80.4
Q ss_pred cCccccceeccCCcEEEEEEE-EcCCcEEEEEEecccch---HHHHHHHHHHHHHhcCCCCceeeEeeEEEeCCeEEEEE
Q 039514 698 DNFAENNIIGRGGFGSVYGAR-LEDGMKIAIKVFHQQCA---SALKSFEAECEVLKKIRHRNLIKVISSCSNDDFKALVL 773 (790)
Q Consensus 698 ~~~~~~~~ig~g~~g~v~~~~-~~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~~~h~nlv~l~~~~~~~~~~~lv~ 773 (790)
++|...+.||+|+||.||++. ..+++.||+|.+..... ...+.+.+|+.++.+++|||||++++++.+.+..|+||
T Consensus 15 ~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv~ 94 (384)
T 4fr4_A 15 DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVV 94 (384)
T ss_dssp GGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEE
Confidence 568899999999999999999 45689999999975432 23467889999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhcC
Q 039514 774 EYMSNGSLGDWLHSS 788 (790)
Q Consensus 774 e~~~~G~L~~~l~~~ 788 (790)
||+++|+|.++++..
T Consensus 95 e~~~gg~L~~~l~~~ 109 (384)
T 4fr4_A 95 DLLLGGDLRYHLQQN 109 (384)
T ss_dssp CCCTTEEHHHHHHTT
T ss_pred ecCCCCcHHHHHHhc
Confidence 999999999998764
No 207
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=99.16 E-value=6e-11 Score=125.46 Aligned_cols=91 Identities=24% Similarity=0.388 Sum_probs=80.3
Q ss_pred cCccccceeccCCcEEEEEEEE-cCCcEEEEEEecccch---HHHHHHHHHHHHHhcCCCCceeeEeeEEEeCCeEEEEE
Q 039514 698 DNFAENNIIGRGGFGSVYGARL-EDGMKIAIKVFHQQCA---SALKSFEAECEVLKKIRHRNLIKVISSCSNDDFKALVL 773 (790)
Q Consensus 698 ~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~~~h~nlv~l~~~~~~~~~~~lv~ 773 (790)
++|...+.||+|+||.||+|+. .+|+.||||.+..... ...+.+.+|+.++.+++||||+++++++.+.+..|+||
T Consensus 41 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 120 (350)
T 1rdq_E 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM 120 (350)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEE
Confidence 6788999999999999999994 5789999999976432 23456889999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhcC
Q 039514 774 EYMSNGSLGDWLHSS 788 (790)
Q Consensus 774 e~~~~G~L~~~l~~~ 788 (790)
||+++|+|.++++..
T Consensus 121 e~~~gg~L~~~l~~~ 135 (350)
T 1rdq_E 121 EYVAGGEMFSHLRRI 135 (350)
T ss_dssp ECCTTCBHHHHHHHH
T ss_pred cCCCCCcHHHHHHHc
Confidence 999999999998753
No 208
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=99.16 E-value=4.9e-11 Score=130.09 Aligned_cols=93 Identities=18% Similarity=0.347 Sum_probs=80.1
Q ss_pred HhcCccccceeccCCcEEEEEEE-EcCCcEEEEEEecccc--hHHHHHHHHHHHHHhcCCCCceeeEeeEEEeCCeEEEE
Q 039514 696 ATDNFAENNIIGRGGFGSVYGAR-LEDGMKIAIKVFHQQC--ASALKSFEAECEVLKKIRHRNLIKVISSCSNDDFKALV 772 (790)
Q Consensus 696 ~~~~~~~~~~ig~g~~g~v~~~~-~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~~~h~nlv~l~~~~~~~~~~~lv 772 (790)
..++|+..+.||+|+||.||+|. ..+|+.||+|.+.... ....+.+.+|+.++++++|||||++++++.+++..|+|
T Consensus 9 ~~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv 88 (444)
T 3soa_A 9 FTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLI 88 (444)
T ss_dssp HHHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEE
T ss_pred ccCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEE
Confidence 35679999999999999999998 5679999999997543 23446789999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHhcC
Q 039514 773 LEYMSNGSLGDWLHSS 788 (790)
Q Consensus 773 ~e~~~~G~L~~~l~~~ 788 (790)
|||+++|+|.+++..+
T Consensus 89 ~E~~~gg~L~~~i~~~ 104 (444)
T 3soa_A 89 FDLVTGGELFEDIVAR 104 (444)
T ss_dssp ECCCBCCBHHHHHHHC
T ss_pred EEeCCCCCHHHHHHHc
Confidence 9999999999998764
No 209
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=99.16 E-value=5.1e-11 Score=121.39 Aligned_cols=90 Identities=23% Similarity=0.451 Sum_probs=79.3
Q ss_pred cCccccceeccCCcEEEEEEEEcCCcEEEEEEecccc--hHHHHHHHHHHHHHhcCCCCceeeEeeEEEeC--CeEEEEE
Q 039514 698 DNFAENNIIGRGGFGSVYGARLEDGMKIAIKVFHQQC--ASALKSFEAECEVLKKIRHRNLIKVISSCSND--DFKALVL 773 (790)
Q Consensus 698 ~~~~~~~~ig~g~~g~v~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~~~h~nlv~l~~~~~~~--~~~~lv~ 773 (790)
++|...+.||+|+||.||+|+.. ++.||||.+.... ....+.+.+|+.++++++||||+++++++... +..++||
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 88 (271)
T 3kmu_A 10 KQLNFLTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLIT 88 (271)
T ss_dssp GGCEEEEEEEEETTEEEEEEEET-TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEEE
T ss_pred HHhHHHHHhcCCCcceEEEEEEC-CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEeee
Confidence 56888999999999999999974 8899999997543 34456799999999999999999999999876 7789999
Q ss_pred ecCCCCCHHHHHhcC
Q 039514 774 EYMSNGSLGDWLHSS 788 (790)
Q Consensus 774 e~~~~G~L~~~l~~~ 788 (790)
||+++|+|.++++..
T Consensus 89 e~~~~~~L~~~l~~~ 103 (271)
T 3kmu_A 89 HWMPYGSLYNVLHEG 103 (271)
T ss_dssp ECCTTCBHHHHHHSC
T ss_pred cccCCCcHHHHHhhc
Confidence 999999999999864
No 210
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=99.15 E-value=6.5e-11 Score=120.46 Aligned_cols=90 Identities=28% Similarity=0.450 Sum_probs=80.7
Q ss_pred hcCccccceeccCCcEEEEEEEEcCCcEEEEEEecccchHHHHHHHHHHHHHhcCCCCceeeEeeEEEeCCeEEEEEecC
Q 039514 697 TDNFAENNIIGRGGFGSVYGARLEDGMKIAIKVFHQQCASALKSFEAECEVLKKIRHRNLIKVISSCSNDDFKALVLEYM 776 (790)
Q Consensus 697 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~~~h~nlv~l~~~~~~~~~~~lv~e~~ 776 (790)
.++|...+.||+|+||.||+|...+++.||||.+...... .+++.+|++++.+++||||+++++++..++..++||||+
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~-~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 85 (268)
T 3sxs_A 7 REEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSMS-EDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYI 85 (268)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTTBC-HHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECC
T ss_pred hhheeeeeeeccCCCceEEEEEecCceeEEEEEeccCCCc-HHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEEcc
Confidence 4678889999999999999999888889999999765432 356889999999999999999999999999999999999
Q ss_pred CCCCHHHHHhc
Q 039514 777 SNGSLGDWLHS 787 (790)
Q Consensus 777 ~~G~L~~~l~~ 787 (790)
++|+|.++++.
T Consensus 86 ~~~~L~~~l~~ 96 (268)
T 3sxs_A 86 SNGCLLNYLRS 96 (268)
T ss_dssp TTCBHHHHHHH
T ss_pred CCCcHHHHHHH
Confidence 99999999875
No 211
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=99.15 E-value=8.3e-11 Score=126.80 Aligned_cols=92 Identities=20% Similarity=0.291 Sum_probs=81.4
Q ss_pred hcCccccceeccC--CcEEEEEEEE-cCCcEEEEEEecccc--hHHHHHHHHHHHHHhcCCCCceeeEeeEEEeCCeEEE
Q 039514 697 TDNFAENNIIGRG--GFGSVYGARL-EDGMKIAIKVFHQQC--ASALKSFEAECEVLKKIRHRNLIKVISSCSNDDFKAL 771 (790)
Q Consensus 697 ~~~~~~~~~ig~g--~~g~v~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~~~h~nlv~l~~~~~~~~~~~l 771 (790)
.++|+..+.||+| +||.||+|.. .+|+.||||++.... ....+.+.+|+.++++++|||||++++++.+++..++
T Consensus 24 ~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 103 (389)
T 3gni_B 24 GGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWV 103 (389)
T ss_dssp GGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred CCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEEE
Confidence 3678899999999 9999999994 579999999997543 3344678899999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHhcC
Q 039514 772 VLEYMSNGSLGDWLHSS 788 (790)
Q Consensus 772 v~e~~~~G~L~~~l~~~ 788 (790)
|||||++|+|.+++...
T Consensus 104 v~e~~~~~~L~~~l~~~ 120 (389)
T 3gni_B 104 VTSFMAYGSAKDLICTH 120 (389)
T ss_dssp EEECCTTCBHHHHHHHT
T ss_pred EEEccCCCCHHHHHhhh
Confidence 99999999999998753
No 212
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=99.15 E-value=6.7e-11 Score=121.44 Aligned_cols=90 Identities=24% Similarity=0.455 Sum_probs=78.1
Q ss_pred hcCccccceeccCCcEEEEEEEEcCCcEEEEEEecccchHHHHHHHHHHHHHhcCCCCceeeEeeEEEeCCeEEEEEecC
Q 039514 697 TDNFAENNIIGRGGFGSVYGARLEDGMKIAIKVFHQQCASALKSFEAECEVLKKIRHRNLIKVISSCSNDDFKALVLEYM 776 (790)
Q Consensus 697 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~~~h~nlv~l~~~~~~~~~~~lv~e~~ 776 (790)
.++|...+.||+|+||.||+|...+++.||||.+...... .+++.+|++++.+++||||+++++++.+++..++||||+
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~-~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 101 (283)
T 3gen_A 23 PKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMS-EDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYM 101 (283)
T ss_dssp GGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTSBC-HHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEECCC
T ss_pred HHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCCCC-HHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEecc
Confidence 4678889999999999999999888889999999865432 366889999999999999999999999999999999999
Q ss_pred CCCCHHHHHhc
Q 039514 777 SNGSLGDWLHS 787 (790)
Q Consensus 777 ~~G~L~~~l~~ 787 (790)
++|+|.++++.
T Consensus 102 ~~~~L~~~l~~ 112 (283)
T 3gen_A 102 ANGCLLNYLRE 112 (283)
T ss_dssp TTCBHHHHHHC
T ss_pred CCCcHHHHHHH
Confidence 99999999875
No 213
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=99.15 E-value=4.2e-11 Score=126.19 Aligned_cols=93 Identities=23% Similarity=0.396 Sum_probs=79.5
Q ss_pred HHhcCccccceeccCCcEEEEEEEE-cCCcEEEEEEecccch---HHHHHHHHHHHHHhcC-CCCceeeEeeEEEeCCeE
Q 039514 695 QATDNFAENNIIGRGGFGSVYGARL-EDGMKIAIKVFHQQCA---SALKSFEAECEVLKKI-RHRNLIKVISSCSNDDFK 769 (790)
Q Consensus 695 ~~~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~~-~h~nlv~l~~~~~~~~~~ 769 (790)
...++|...++||+|+||.||+|+. .+|+.||||+++.... ...+.+.+|..++..+ +||||+++++++.+.+..
T Consensus 14 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~ 93 (345)
T 1xjd_A 14 LKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENL 93 (345)
T ss_dssp --CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEE
T ss_pred CChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEE
Confidence 3567899999999999999999994 5789999999976432 2345677899998876 899999999999999999
Q ss_pred EEEEecCCCCCHHHHHhc
Q 039514 770 ALVLEYMSNGSLGDWLHS 787 (790)
Q Consensus 770 ~lv~e~~~~G~L~~~l~~ 787 (790)
|+||||+++|+|.++++.
T Consensus 94 ~lv~E~~~gg~L~~~l~~ 111 (345)
T 1xjd_A 94 FFVMEYLNGGDLMYHIQS 111 (345)
T ss_dssp EEEEECCTTCBHHHHHHH
T ss_pred EEEEeCCCCCcHHHHHHH
Confidence 999999999999999875
No 214
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=99.15 E-value=4.5e-11 Score=127.22 Aligned_cols=90 Identities=22% Similarity=0.308 Sum_probs=79.6
Q ss_pred hcCccccceeccCCcEEEEEEE-EcCCcEEEEEEecccchHHHHHHHHHHHHHhcCCCCceeeEeeEEEeCCeEEEEEec
Q 039514 697 TDNFAENNIIGRGGFGSVYGAR-LEDGMKIAIKVFHQQCASALKSFEAECEVLKKIRHRNLIKVISSCSNDDFKALVLEY 775 (790)
Q Consensus 697 ~~~~~~~~~ig~g~~g~v~~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~~~h~nlv~l~~~~~~~~~~~lv~e~ 775 (790)
.++|...+.||+|+||.||++. ..+++.||||.+...... .+.+.+|+.++++++|||||++++++.+.+..++||||
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~ 97 (361)
T 3uc3_A 19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAI-DENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEY 97 (361)
T ss_dssp TTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTTS-CHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred CCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCccc-cHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEEe
Confidence 4679999999999999999999 457899999999764322 25678999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhc
Q 039514 776 MSNGSLGDWLHS 787 (790)
Q Consensus 776 ~~~G~L~~~l~~ 787 (790)
+++|+|.+++..
T Consensus 98 ~~~~~L~~~l~~ 109 (361)
T 3uc3_A 98 ASGGELYERICN 109 (361)
T ss_dssp CCSCBHHHHHHH
T ss_pred CCCCCHHHHHHh
Confidence 999999999865
No 215
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=99.15 E-value=4.5e-11 Score=125.42 Aligned_cols=92 Identities=26% Similarity=0.460 Sum_probs=75.1
Q ss_pred hcCccccceeccCCcEEEEEEEE----cCCcEEEEEEecccch----HHHHHHHHHHHHHhcCCCCceeeEeeEEEeCCe
Q 039514 697 TDNFAENNIIGRGGFGSVYGARL----EDGMKIAIKVFHQQCA----SALKSFEAECEVLKKIRHRNLIKVISSCSNDDF 768 (790)
Q Consensus 697 ~~~~~~~~~ig~g~~g~v~~~~~----~~~~~vavK~~~~~~~----~~~~~~~~e~~~l~~~~h~nlv~l~~~~~~~~~ 768 (790)
.++|+..+.||+|+||.||++.. .+++.||+|.++.... .....+.+|+.++.+++||||+++++++..++.
T Consensus 16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 95 (327)
T 3a62_A 16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGK 95 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSC
T ss_pred HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCE
Confidence 36789999999999999999985 4789999999976431 233457889999999999999999999999999
Q ss_pred EEEEEecCCCCCHHHHHhcC
Q 039514 769 KALVLEYMSNGSLGDWLHSS 788 (790)
Q Consensus 769 ~~lv~e~~~~G~L~~~l~~~ 788 (790)
.|+||||+++|+|.+++...
T Consensus 96 ~~lv~e~~~~~~L~~~l~~~ 115 (327)
T 3a62_A 96 LYLILEYLSGGELFMQLERE 115 (327)
T ss_dssp EEEEEECCTTEEHHHHHHHH
T ss_pred EEEEEeCCCCCcHHHHHHhC
Confidence 99999999999999998753
No 216
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=99.15 E-value=7.6e-11 Score=123.16 Aligned_cols=91 Identities=25% Similarity=0.362 Sum_probs=79.0
Q ss_pred cCccc-cceeccCCcEEEEEEE-EcCCcEEEEEEecccchHHHHHHHHHHHHHhcC-CCCceeeEeeEEEeCCeEEEEEe
Q 039514 698 DNFAE-NNIIGRGGFGSVYGAR-LEDGMKIAIKVFHQQCASALKSFEAECEVLKKI-RHRNLIKVISSCSNDDFKALVLE 774 (790)
Q Consensus 698 ~~~~~-~~~ig~g~~g~v~~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~~-~h~nlv~l~~~~~~~~~~~lv~e 774 (790)
+.|.. .++||+|+||.||+|. ..+++.||||.+........+.+.+|++++.++ +||||+++++++.+++..++|||
T Consensus 12 ~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e 91 (316)
T 2ac3_A 12 DVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFE 91 (316)
T ss_dssp TSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred eeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEE
Confidence 45666 4789999999999999 567999999999765444456788999999985 79999999999999999999999
Q ss_pred cCCCCCHHHHHhcC
Q 039514 775 YMSNGSLGDWLHSS 788 (790)
Q Consensus 775 ~~~~G~L~~~l~~~ 788 (790)
|+++|+|.+++...
T Consensus 92 ~~~~~~L~~~l~~~ 105 (316)
T 2ac3_A 92 KMRGGSILSHIHKR 105 (316)
T ss_dssp CCTTCBHHHHHHHH
T ss_pred cCCCCcHHHHHhcc
Confidence 99999999998753
No 217
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=99.15 E-value=6.7e-11 Score=129.89 Aligned_cols=89 Identities=31% Similarity=0.535 Sum_probs=78.5
Q ss_pred hcCccccceeccCCcEEEEEEEEcCCcEEEEEEecccchHHHHHHHHHHHHHhcCCCCceeeEeeEEEeCC-eEEEEEec
Q 039514 697 TDNFAENNIIGRGGFGSVYGARLEDGMKIAIKVFHQQCASALKSFEAECEVLKKIRHRNLIKVISSCSNDD-FKALVLEY 775 (790)
Q Consensus 697 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~~~h~nlv~l~~~~~~~~-~~~lv~e~ 775 (790)
.++|...+.||+|+||.||+|... |+.||||.++... ..+.|.+|+++|++++|||||++++++...+ ..|+||||
T Consensus 192 ~~~~~~~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~e~ 268 (450)
T 1k9a_A 192 MKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEY 268 (450)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEET-TEEEEEEEESSCT--TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEEEC
T ss_pred hHHeEEEeeecCcCCeeEEEEEec-CCeEEEEEeCCch--HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEEEe
Confidence 466888999999999999999875 7899999998654 3467899999999999999999999987765 79999999
Q ss_pred CCCCCHHHHHhcC
Q 039514 776 MSNGSLGDWLHSS 788 (790)
Q Consensus 776 ~~~G~L~~~l~~~ 788 (790)
|++|+|.++++..
T Consensus 269 ~~~g~L~~~l~~~ 281 (450)
T 1k9a_A 269 MAKGSLVDYLRSR 281 (450)
T ss_dssp CTTCBHHHHHHHH
T ss_pred cCCCcHHHHHHhc
Confidence 9999999999863
No 218
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=99.15 E-value=6.1e-11 Score=130.43 Aligned_cols=90 Identities=28% Similarity=0.512 Sum_probs=79.9
Q ss_pred HhcCccccceeccCCcEEEEEEEEcCCcEEEEEEecccchHHHHHHHHHHHHHhcCCCCceeeEeeEEEeCCeEEEEEec
Q 039514 696 ATDNFAENNIIGRGGFGSVYGARLEDGMKIAIKVFHQQCASALKSFEAECEVLKKIRHRNLIKVISSCSNDDFKALVLEY 775 (790)
Q Consensus 696 ~~~~~~~~~~ig~g~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~~~h~nlv~l~~~~~~~~~~~lv~e~ 775 (790)
..++|...+.||+|+||.||+|...+++.||||.++.... ..++|.+|+.+|++++|||||++++++. .+..++||||
T Consensus 186 ~~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~lv~e~ 263 (454)
T 1qcf_A 186 PRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSM-SVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYIITEF 263 (454)
T ss_dssp CGGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTSB-CHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEECC
T ss_pred chHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCCc-cHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEEEEee
Confidence 4567888999999999999999988888999999986543 3577999999999999999999999986 5678999999
Q ss_pred CCCCCHHHHHhc
Q 039514 776 MSNGSLGDWLHS 787 (790)
Q Consensus 776 ~~~G~L~~~l~~ 787 (790)
|++|+|.++++.
T Consensus 264 ~~~g~L~~~l~~ 275 (454)
T 1qcf_A 264 MAKGSLLDFLKS 275 (454)
T ss_dssp CTTCBHHHHHHS
T ss_pred cCCCcHHHHHHh
Confidence 999999999974
No 219
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=99.15 E-value=3.1e-11 Score=128.65 Aligned_cols=101 Identities=22% Similarity=0.426 Sum_probs=83.5
Q ss_pred cCHHHHHHHhcCccccceeccCCcEEEEEEEE------cCCcEEEEEEecccc-hHHHHHHHHHHHHHhcC-CCCceeeE
Q 039514 688 FSYLELLQATDNFAENNIIGRGGFGSVYGARL------EDGMKIAIKVFHQQC-ASALKSFEAECEVLKKI-RHRNLIKV 759 (790)
Q Consensus 688 ~~~~~~~~~~~~~~~~~~ig~g~~g~v~~~~~------~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~~-~h~nlv~l 759 (790)
+...+.....++|...+.||+|+||.||+|.. .+++.||||++.... ....+.+.+|++++.++ +|||||++
T Consensus 12 ~~~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~ 91 (359)
T 3vhe_A 12 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNL 91 (359)
T ss_dssp CCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred CCcccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeee
Confidence 33444455678899999999999999999973 245789999997643 33456799999999999 79999999
Q ss_pred eeEEEeCC-eEEEEEecCCCCCHHHHHhcC
Q 039514 760 ISSCSNDD-FKALVLEYMSNGSLGDWLHSS 788 (790)
Q Consensus 760 ~~~~~~~~-~~~lv~e~~~~G~L~~~l~~~ 788 (790)
+++|...+ ..++||||+++|+|.++++..
T Consensus 92 ~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~ 121 (359)
T 3vhe_A 92 LGACTKPGGPLMVIVEFCKFGNLSTYLRSK 121 (359)
T ss_dssp EEEECSTTSCCEEEEECCTTEEHHHHHHTT
T ss_pred eeeeecCCCceEEEEEecCCCcHHHHHHhc
Confidence 99998754 589999999999999999864
No 220
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=99.14 E-value=3.6e-11 Score=125.87 Aligned_cols=92 Identities=23% Similarity=0.356 Sum_probs=78.0
Q ss_pred hcCccccceeccCCcEEEEEEEE-cCCcEEEEEEecccch-HHHHHHHHHHHHHhcCCCCceeeEeeEEEeCCeEEEEEe
Q 039514 697 TDNFAENNIIGRGGFGSVYGARL-EDGMKIAIKVFHQQCA-SALKSFEAECEVLKKIRHRNLIKVISSCSNDDFKALVLE 774 (790)
Q Consensus 697 ~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~~~h~nlv~l~~~~~~~~~~~lv~e 774 (790)
.++|+..+.||+|+||.||+|.. .+++.||||.+..... ...+.+.+|+.+++.++|||||++++++.+++..|+|||
T Consensus 6 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e 85 (323)
T 3tki_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE 85 (323)
T ss_dssp TTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred hhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEE
Confidence 36799999999999999999994 5789999999965432 223568899999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhcC
Q 039514 775 YMSNGSLGDWLHSS 788 (790)
Q Consensus 775 ~~~~G~L~~~l~~~ 788 (790)
|+++|+|.++++..
T Consensus 86 ~~~~~~L~~~l~~~ 99 (323)
T 3tki_A 86 YCSGGELFDRIEPD 99 (323)
T ss_dssp CCTTEEGGGGSBTT
T ss_pred cCCCCcHHHHHhhc
Confidence 99999999988653
No 221
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=99.14 E-value=8.4e-11 Score=124.41 Aligned_cols=93 Identities=27% Similarity=0.517 Sum_probs=81.4
Q ss_pred HhcCccccceeccCCcEEEEEEEEc------CCcEEEEEEecccc-hHHHHHHHHHHHHHhcCCCCceeeEeeEEEeCCe
Q 039514 696 ATDNFAENNIIGRGGFGSVYGARLE------DGMKIAIKVFHQQC-ASALKSFEAECEVLKKIRHRNLIKVISSCSNDDF 768 (790)
Q Consensus 696 ~~~~~~~~~~ig~g~~g~v~~~~~~------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~~~h~nlv~l~~~~~~~~~ 768 (790)
..++|...+.||+|+||.||+|... +++.||||.++... ....+.+.+|+.++.+++||||+++++++..++.
T Consensus 45 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 124 (343)
T 1luf_A 45 PRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKP 124 (343)
T ss_dssp CGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSS
T ss_pred cHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccCCc
Confidence 4577899999999999999999953 34889999997643 3345679999999999999999999999999999
Q ss_pred EEEEEecCCCCCHHHHHhcC
Q 039514 769 KALVLEYMSNGSLGDWLHSS 788 (790)
Q Consensus 769 ~~lv~e~~~~G~L~~~l~~~ 788 (790)
.++||||+++|+|.++++..
T Consensus 125 ~~lv~e~~~~~~L~~~l~~~ 144 (343)
T 1luf_A 125 MCLLFEYMAYGDLNEFLRSM 144 (343)
T ss_dssp CEEEEECCTTCBHHHHHHHT
T ss_pred eEEEEecCCCCcHHHHHHHh
Confidence 99999999999999999763
No 222
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=99.14 E-value=6.4e-11 Score=123.00 Aligned_cols=91 Identities=27% Similarity=0.388 Sum_probs=78.0
Q ss_pred hcCccccceeccCCcEEEEEEEE-cCCcEEEEEEecccchHHHHHHHHHHHHHhcCCCCceeeEeeEEEeCCeEEEEEec
Q 039514 697 TDNFAENNIIGRGGFGSVYGARL-EDGMKIAIKVFHQQCASALKSFEAECEVLKKIRHRNLIKVISSCSNDDFKALVLEY 775 (790)
Q Consensus 697 ~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~~~h~nlv~l~~~~~~~~~~~lv~e~ 775 (790)
.++|...+.||+|+||.||++.. .+|+.||+|.+........+.+.+|+.++.+++||||+++++++...+..++||||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 87 (304)
T 2jam_A 8 RKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQL 87 (304)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred hccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEEc
Confidence 45688899999999999999994 57899999999865444456788999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhc
Q 039514 776 MSNGSLGDWLHS 787 (790)
Q Consensus 776 ~~~G~L~~~l~~ 787 (790)
+++|+|.+++..
T Consensus 88 ~~~~~L~~~l~~ 99 (304)
T 2jam_A 88 VSGGELFDRILE 99 (304)
T ss_dssp CCSCBHHHHHHH
T ss_pred CCCccHHHHHHH
Confidence 999999999864
No 223
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=99.14 E-value=8.1e-11 Score=123.13 Aligned_cols=91 Identities=30% Similarity=0.461 Sum_probs=78.5
Q ss_pred cCccccceeccCCcEEEEEEEE-cCCcEEEEEEecccch-HHHHHHHHHHHHHhcCCCCceeeEeeEEEeCC--eEEEEE
Q 039514 698 DNFAENNIIGRGGFGSVYGARL-EDGMKIAIKVFHQQCA-SALKSFEAECEVLKKIRHRNLIKVISSCSNDD--FKALVL 773 (790)
Q Consensus 698 ~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~~~h~nlv~l~~~~~~~~--~~~lv~ 773 (790)
+.|...+.||+|+||.||+|.. .+++.||||++..... ...+.+.+|++++++++||||+++++++...+ ..++||
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 88 (319)
T 4euu_A 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIM 88 (319)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEE
T ss_pred CCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEEE
Confidence 5688899999999999999994 5689999999975432 33566889999999999999999999998755 789999
Q ss_pred ecCCCCCHHHHHhcC
Q 039514 774 EYMSNGSLGDWLHSS 788 (790)
Q Consensus 774 e~~~~G~L~~~l~~~ 788 (790)
||+++|+|.++++..
T Consensus 89 e~~~~~~L~~~l~~~ 103 (319)
T 4euu_A 89 EFCPCGSLYTVLEEP 103 (319)
T ss_dssp ECCTTCBHHHHHHSG
T ss_pred eCCCCCCHHHHHHHh
Confidence 999999999999753
No 224
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=99.13 E-value=5.2e-11 Score=127.60 Aligned_cols=92 Identities=22% Similarity=0.357 Sum_probs=78.6
Q ss_pred hcCccccceeccCCcEEEEEEEE-cCCcEEEEEEecccchH---HHHHHHHHHHHHhcC-CCCceeeEeeEEEeCCeEEE
Q 039514 697 TDNFAENNIIGRGGFGSVYGARL-EDGMKIAIKVFHQQCAS---ALKSFEAECEVLKKI-RHRNLIKVISSCSNDDFKAL 771 (790)
Q Consensus 697 ~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~~~---~~~~~~~e~~~l~~~-~h~nlv~l~~~~~~~~~~~l 771 (790)
.++|+..++||+|+||.||+|+. .+++.||||++++.... ..+.+.+|..++.++ +|||||++++++.+.+..|+
T Consensus 51 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l 130 (396)
T 4dc2_A 51 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF 130 (396)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEE
T ss_pred hhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEE
Confidence 46799999999999999999994 56889999999765322 223577899998877 89999999999999999999
Q ss_pred EEecCCCCCHHHHHhcC
Q 039514 772 VLEYMSNGSLGDWLHSS 788 (790)
Q Consensus 772 v~e~~~~G~L~~~l~~~ 788 (790)
||||+++|+|.++++..
T Consensus 131 V~E~~~gg~L~~~l~~~ 147 (396)
T 4dc2_A 131 VIEYVNGGDLMFHMQRQ 147 (396)
T ss_dssp EEECCTTCBHHHHHHHH
T ss_pred EEEcCCCCcHHHHHHHc
Confidence 99999999999998753
No 225
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=99.13 E-value=9.8e-11 Score=122.60 Aligned_cols=90 Identities=26% Similarity=0.352 Sum_probs=76.5
Q ss_pred hcCccccceeccCCcEEEEEEEEcCCcEEEEEEecccchHHHHHHHHHHHHHhcCCCCceeeEeeEEEeCC----eEEEE
Q 039514 697 TDNFAENNIIGRGGFGSVYGARLEDGMKIAIKVFHQQCASALKSFEAECEVLKKIRHRNLIKVISSCSNDD----FKALV 772 (790)
Q Consensus 697 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~~~h~nlv~l~~~~~~~~----~~~lv 772 (790)
..+|+..+.||+|+||.||+|+.. ++.||||++..... ....+.+|+.++.+++|||||++++++.... ..++|
T Consensus 23 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~lv 100 (322)
T 3soc_A 23 SMPLQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQDK-QSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLI 100 (322)
T ss_dssp TEEEEEEEEEECSTTCEEEEEEET-TEEEEEEEECGGGH-HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEE
T ss_pred hhhchhhheecccCceEEEEEEEC-CCEEEEEEeecCch-HHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEEE
Confidence 467889999999999999999865 78999999976543 2345667999999999999999999998744 47999
Q ss_pred EecCCCCCHHHHHhcC
Q 039514 773 LEYMSNGSLGDWLHSS 788 (790)
Q Consensus 773 ~e~~~~G~L~~~l~~~ 788 (790)
|||+++|+|.++++..
T Consensus 101 ~e~~~~g~L~~~l~~~ 116 (322)
T 3soc_A 101 TAFHEKGSLSDFLKAN 116 (322)
T ss_dssp EECCTTCBHHHHHHHC
T ss_pred EecCCCCCHHHHHHhc
Confidence 9999999999998753
No 226
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=99.13 E-value=1.1e-10 Score=120.72 Aligned_cols=90 Identities=27% Similarity=0.530 Sum_probs=78.0
Q ss_pred CccccceeccCCcEEEEEEE-EcCCcEEEEEEecccchHHHHHHHHHHHHHhcCCCCceeeEeeEEEeCCeEEEEEecCC
Q 039514 699 NFAENNIIGRGGFGSVYGAR-LEDGMKIAIKVFHQQCASALKSFEAECEVLKKIRHRNLIKVISSCSNDDFKALVLEYMS 777 (790)
Q Consensus 699 ~~~~~~~ig~g~~g~v~~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~~~h~nlv~l~~~~~~~~~~~lv~e~~~ 777 (790)
.|....+||+|+||.||+|. ..+++.||||.+........+.+.+|+.++..++||||+++++++...+..++||||++
T Consensus 23 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 102 (295)
T 2clq_A 23 ENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVP 102 (295)
T ss_dssp TTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCS
T ss_pred CCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeCC
Confidence 35556799999999999999 56789999999977655556778999999999999999999999999999999999999
Q ss_pred CCCHHHHHhcC
Q 039514 778 NGSLGDWLHSS 788 (790)
Q Consensus 778 ~G~L~~~l~~~ 788 (790)
+|+|.++++..
T Consensus 103 ~~~L~~~l~~~ 113 (295)
T 2clq_A 103 GGSLSALLRSK 113 (295)
T ss_dssp EEEHHHHHHHT
T ss_pred CCCHHHHHHhh
Confidence 99999998754
No 227
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=99.13 E-value=3.8e-11 Score=133.46 Aligned_cols=90 Identities=24% Similarity=0.547 Sum_probs=80.4
Q ss_pred hcCccccceeccCCcEEEEEEEEc-CCcEEEEEEecccchHHHHHHHHHHHHHhcCCCCceeeEeeEEEeCCeEEEEEec
Q 039514 697 TDNFAENNIIGRGGFGSVYGARLE-DGMKIAIKVFHQQCASALKSFEAECEVLKKIRHRNLIKVISSCSNDDFKALVLEY 775 (790)
Q Consensus 697 ~~~~~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~~~h~nlv~l~~~~~~~~~~~lv~e~ 775 (790)
..+|...+.||+|+||.||+|... +++.||||.++.... ..++|.+|+.+|++++|||||+++++|..++..++||||
T Consensus 219 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E~ 297 (495)
T 1opk_A 219 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM-EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEF 297 (495)
T ss_dssp GGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSSS-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEEC
T ss_pred HHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCccc-chHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEEEEc
Confidence 456888899999999999999965 488999999976543 356799999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhc
Q 039514 776 MSNGSLGDWLHS 787 (790)
Q Consensus 776 ~~~G~L~~~l~~ 787 (790)
|++|+|.++++.
T Consensus 298 ~~~g~L~~~l~~ 309 (495)
T 1opk_A 298 MTYGNLLDYLRE 309 (495)
T ss_dssp CTTCBHHHHHHH
T ss_pred cCCCCHHHHHHh
Confidence 999999999975
No 228
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=99.13 E-value=9.5e-11 Score=119.12 Aligned_cols=90 Identities=30% Similarity=0.454 Sum_probs=80.8
Q ss_pred cCccccceeccCCcEEEEEEEEcCCcEEEEEEecccchHHHHHHHHHHHHHhcCCCCceeeEeeEEEeCCeEEEEEecCC
Q 039514 698 DNFAENNIIGRGGFGSVYGARLEDGMKIAIKVFHQQCASALKSFEAECEVLKKIRHRNLIKVISSCSNDDFKALVLEYMS 777 (790)
Q Consensus 698 ~~~~~~~~ig~g~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~~~h~nlv~l~~~~~~~~~~~lv~e~~~ 777 (790)
++|...+.||+|+||.||+|...+++.||+|.+...... .+++.+|++++.+++||||+++++++..++..++||||++
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~~-~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 86 (267)
T 3t9t_A 8 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMS-EEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFME 86 (267)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTTBC-HHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECCCT
T ss_pred hheeeeeEecCCCceeEEEEEecCCCeEEEEEccccCCC-HHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeCCC
Confidence 568889999999999999999878889999999865432 3678899999999999999999999999999999999999
Q ss_pred CCCHHHHHhcC
Q 039514 778 NGSLGDWLHSS 788 (790)
Q Consensus 778 ~G~L~~~l~~~ 788 (790)
+|+|.++++..
T Consensus 87 ~~~L~~~~~~~ 97 (267)
T 3t9t_A 87 HGCLSDYLRTQ 97 (267)
T ss_dssp TCBHHHHHHHT
T ss_pred CCcHHHHHhhC
Confidence 99999999764
No 229
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=99.13 E-value=6.8e-11 Score=129.87 Aligned_cols=92 Identities=27% Similarity=0.434 Sum_probs=80.9
Q ss_pred hcCccccceeccCCcEEEEEEEE-cCCcEEEEEEecccchH---HHHHHHHHHHHHhcCCCCceeeEeeEEEeCCeEEEE
Q 039514 697 TDNFAENNIIGRGGFGSVYGARL-EDGMKIAIKVFHQQCAS---ALKSFEAECEVLKKIRHRNLIKVISSCSNDDFKALV 772 (790)
Q Consensus 697 ~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~~~---~~~~~~~e~~~l~~~~h~nlv~l~~~~~~~~~~~lv 772 (790)
..+|...+.||+|+||.||+|.. .+|+.||||.+...... ..+.+.+|+.+++.++||||+++++++.+.+..|+|
T Consensus 15 ~~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv 94 (476)
T 2y94_A 15 IGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMV 94 (476)
T ss_dssp ETTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred ecCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEE
Confidence 36788899999999999999994 57999999999764322 245688999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHhcC
Q 039514 773 LEYMSNGSLGDWLHSS 788 (790)
Q Consensus 773 ~e~~~~G~L~~~l~~~ 788 (790)
|||+++|+|.+++...
T Consensus 95 ~E~~~gg~L~~~l~~~ 110 (476)
T 2y94_A 95 MEYVSGGELFDYICKN 110 (476)
T ss_dssp EECCSSEEHHHHTTSS
T ss_pred EeCCCCCcHHHHHHhc
Confidence 9999999999998754
No 230
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=99.13 E-value=9.8e-11 Score=122.61 Aligned_cols=92 Identities=26% Similarity=0.411 Sum_probs=80.6
Q ss_pred hcCccccceeccCCcEEEEEEE-EcCCcEEEEEEecccchH------HHHHHHHHHHHHhcCCCCceeeEeeEEEeCCeE
Q 039514 697 TDNFAENNIIGRGGFGSVYGAR-LEDGMKIAIKVFHQQCAS------ALKSFEAECEVLKKIRHRNLIKVISSCSNDDFK 769 (790)
Q Consensus 697 ~~~~~~~~~ig~g~~g~v~~~~-~~~~~~vavK~~~~~~~~------~~~~~~~e~~~l~~~~h~nlv~l~~~~~~~~~~ 769 (790)
.+.|...+.||+|+||.||+|. ..+|+.||||.+...... ..+++.+|+.++.+++||||+++++++...+..
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 90 (321)
T 2a2a_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDV 90 (321)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred hccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEE
Confidence 3568899999999999999999 457899999999754321 256789999999999999999999999999999
Q ss_pred EEEEecCCCCCHHHHHhcC
Q 039514 770 ALVLEYMSNGSLGDWLHSS 788 (790)
Q Consensus 770 ~lv~e~~~~G~L~~~l~~~ 788 (790)
++||||+++|+|.+++...
T Consensus 91 ~lv~e~~~~~~L~~~l~~~ 109 (321)
T 2a2a_A 91 VLILELVSGGELFDFLAQK 109 (321)
T ss_dssp EEEECCCCSCBHHHHHHTC
T ss_pred EEEEEcCCCCcHHHHHHhc
Confidence 9999999999999998754
No 231
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=99.12 E-value=5.4e-11 Score=126.97 Aligned_cols=92 Identities=23% Similarity=0.442 Sum_probs=79.8
Q ss_pred hcCccccceeccCCcEEEEEEEEc------CCcEEEEEEeccc-chHHHHHHHHHHHHHhcCCCCceeeEeeEEEeCCeE
Q 039514 697 TDNFAENNIIGRGGFGSVYGARLE------DGMKIAIKVFHQQ-CASALKSFEAECEVLKKIRHRNLIKVISSCSNDDFK 769 (790)
Q Consensus 697 ~~~~~~~~~ig~g~~g~v~~~~~~------~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~~~h~nlv~l~~~~~~~~~~ 769 (790)
.++|...+.||+|+||.||+|.+. +++.||||++... ......++.+|+.++.+++|||||++++++...+..
T Consensus 70 ~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~ 149 (367)
T 3l9p_A 70 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPR 149 (367)
T ss_dssp GGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred HhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCC
Confidence 366888999999999999999842 4678999999754 334456788999999999999999999999999999
Q ss_pred EEEEecCCCCCHHHHHhcC
Q 039514 770 ALVLEYMSNGSLGDWLHSS 788 (790)
Q Consensus 770 ~lv~e~~~~G~L~~~l~~~ 788 (790)
++||||+++|+|.++++..
T Consensus 150 ~lv~e~~~~g~L~~~l~~~ 168 (367)
T 3l9p_A 150 FILLELMAGGDLKSFLRET 168 (367)
T ss_dssp EEEEECCTTEEHHHHHHHH
T ss_pred EEEEEeCCCCCHHHHHHhh
Confidence 9999999999999999753
No 232
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=99.12 E-value=9.7e-11 Score=124.84 Aligned_cols=91 Identities=22% Similarity=0.342 Sum_probs=80.9
Q ss_pred cCccccceeccCCcEEEEEEEE-cCCcEEEEEEecccc-hHHHHHHHHHHHHHhcCCCCceeeEeeEEEeCCeEEEEEec
Q 039514 698 DNFAENNIIGRGGFGSVYGARL-EDGMKIAIKVFHQQC-ASALKSFEAECEVLKKIRHRNLIKVISSCSNDDFKALVLEY 775 (790)
Q Consensus 698 ~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~~~h~nlv~l~~~~~~~~~~~lv~e~ 775 (790)
++|...+.||+|+||.||+|.. .+++.||+|.+.... ....+.+.+|+.++.+++||||+++++++..++..++||||
T Consensus 33 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 112 (360)
T 3eqc_A 33 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEH 112 (360)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEECC
T ss_pred ccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEEEC
Confidence 5688899999999999999994 578999999997653 33456789999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhcC
Q 039514 776 MSNGSLGDWLHSS 788 (790)
Q Consensus 776 ~~~G~L~~~l~~~ 788 (790)
+++|+|.++++..
T Consensus 113 ~~~~~L~~~l~~~ 125 (360)
T 3eqc_A 113 MDGGSLDQVLKKA 125 (360)
T ss_dssp CTTCBHHHHHHHH
T ss_pred CCCCCHHHHHHHc
Confidence 9999999998753
No 233
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=99.12 E-value=1.1e-10 Score=130.10 Aligned_cols=92 Identities=23% Similarity=0.379 Sum_probs=80.5
Q ss_pred hcCccccceeccCCcEEEEEEEE-cCCcEEEEEEecccch---HHHHHHHHHHHHHhcCCCCceeeEeeEEEeCCeEEEE
Q 039514 697 TDNFAENNIIGRGGFGSVYGARL-EDGMKIAIKVFHQQCA---SALKSFEAECEVLKKIRHRNLIKVISSCSNDDFKALV 772 (790)
Q Consensus 697 ~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~~~h~nlv~l~~~~~~~~~~~lv 772 (790)
.++|...++||+|+||.||+|.. .+|+.||||.+..... .....+.+|+.++.+++|||||++++++.+.+..|+|
T Consensus 183 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV 262 (576)
T 2acx_A 183 KNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLV 262 (576)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEEE
Confidence 46688899999999999999994 5799999999976432 2245678999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHhcC
Q 039514 773 LEYMSNGSLGDWLHSS 788 (790)
Q Consensus 773 ~e~~~~G~L~~~l~~~ 788 (790)
||||++|+|.+++...
T Consensus 263 mEy~~gg~L~~~l~~~ 278 (576)
T 2acx_A 263 LTLMNGGDLKFHIYHM 278 (576)
T ss_dssp ECCCCSCBHHHHHHSS
T ss_pred EEcCCCCcHHHHHHhc
Confidence 9999999999998764
No 234
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=99.12 E-value=9.4e-11 Score=120.45 Aligned_cols=90 Identities=29% Similarity=0.422 Sum_probs=79.5
Q ss_pred cCccccceeccCCcEEEEEEE-EcCCcEEEEEEecccch-HHHHHHHHHHHHHhcCCCCceeeEeeEEEeCCeEEEEEec
Q 039514 698 DNFAENNIIGRGGFGSVYGAR-LEDGMKIAIKVFHQQCA-SALKSFEAECEVLKKIRHRNLIKVISSCSNDDFKALVLEY 775 (790)
Q Consensus 698 ~~~~~~~~ig~g~~g~v~~~~-~~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~~~h~nlv~l~~~~~~~~~~~lv~e~ 775 (790)
+.|...+.||+|+||.||++. ..+++.||+|.+..... ...+.+.+|++++++++||||+++++++.+.+..++||||
T Consensus 22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 101 (285)
T 3is5_A 22 DLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMET 101 (285)
T ss_dssp HHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred hheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEEe
Confidence 568889999999999999999 46789999999976432 2356788999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhc
Q 039514 776 MSNGSLGDWLHS 787 (790)
Q Consensus 776 ~~~G~L~~~l~~ 787 (790)
+++|+|.+++..
T Consensus 102 ~~~~~L~~~l~~ 113 (285)
T 3is5_A 102 CEGGELLERIVS 113 (285)
T ss_dssp CSCCBHHHHHHH
T ss_pred CCCCcHHHHHHh
Confidence 999999998853
No 235
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=99.12 E-value=1.3e-10 Score=129.67 Aligned_cols=93 Identities=22% Similarity=0.338 Sum_probs=77.9
Q ss_pred HhcCccccceeccCCcEEEEEEE-EcCCcEEEEEEecccch-------------HHHHHHHHHHHHHhcCCCCceeeEee
Q 039514 696 ATDNFAENNIIGRGGFGSVYGAR-LEDGMKIAIKVFHQQCA-------------SALKSFEAECEVLKKIRHRNLIKVIS 761 (790)
Q Consensus 696 ~~~~~~~~~~ig~g~~g~v~~~~-~~~~~~vavK~~~~~~~-------------~~~~~~~~e~~~l~~~~h~nlv~l~~ 761 (790)
..+.|...+.||+|+||.||+|. ..+++.||||.+..... ...+.+.+|+.++++++|||||++++
T Consensus 34 i~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~ 113 (504)
T 3q5i_A 34 IGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFD 113 (504)
T ss_dssp GGGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEE
T ss_pred cccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEE
Confidence 35779999999999999999999 45689999999975321 12456889999999999999999999
Q ss_pred EEEeCCeEEEEEecCCCCCHHHHHhcC
Q 039514 762 SCSNDDFKALVLEYMSNGSLGDWLHSS 788 (790)
Q Consensus 762 ~~~~~~~~~lv~e~~~~G~L~~~l~~~ 788 (790)
++.+.+..++|||||++|+|.+++...
T Consensus 114 ~~~~~~~~~lv~e~~~gg~L~~~l~~~ 140 (504)
T 3q5i_A 114 VFEDKKYFYLVTEFYEGGELFEQIINR 140 (504)
T ss_dssp EEECSSEEEEEEECCTTCBHHHHHHHH
T ss_pred EEEcCCEEEEEEecCCCCcHHHHHHHc
Confidence 999999999999999999999988653
No 236
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=99.11 E-value=1.4e-10 Score=119.26 Aligned_cols=91 Identities=29% Similarity=0.377 Sum_probs=80.2
Q ss_pred hcCccccceeccCCcEEEEEEEE-cCCcEEEEEEecccc--hHHHHHHHHHHHHHhcC-CCCceeeEeeEEEeCCeEEEE
Q 039514 697 TDNFAENNIIGRGGFGSVYGARL-EDGMKIAIKVFHQQC--ASALKSFEAECEVLKKI-RHRNLIKVISSCSNDDFKALV 772 (790)
Q Consensus 697 ~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~~-~h~nlv~l~~~~~~~~~~~lv 772 (790)
..+|...+.||+|+||.||+|.. .+++.||||.+.... .....++.+|+..+.++ +||||+++++++.+.+..++|
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~lv 89 (289)
T 1x8b_A 10 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQ 89 (289)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEEE
T ss_pred cchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEE
Confidence 46788999999999999999995 478999999997532 23456788999999999 899999999999999999999
Q ss_pred EecCCCCCHHHHHhc
Q 039514 773 LEYMSNGSLGDWLHS 787 (790)
Q Consensus 773 ~e~~~~G~L~~~l~~ 787 (790)
|||+++|+|.++++.
T Consensus 90 ~e~~~~~~L~~~l~~ 104 (289)
T 1x8b_A 90 NEYCNGGSLADAISE 104 (289)
T ss_dssp EECCTTCBHHHHHHH
T ss_pred EEecCCCcHHHHHHh
Confidence 999999999999875
No 237
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=99.11 E-value=1.5e-10 Score=118.44 Aligned_cols=92 Identities=23% Similarity=0.546 Sum_probs=80.6
Q ss_pred hcCccccceeccCCcEEEEEEEE-cCCcEEEEEEecccchH---HHHHHHHHHHHHhcCCCCceeeEeeEEEeCCeEEEE
Q 039514 697 TDNFAENNIIGRGGFGSVYGARL-EDGMKIAIKVFHQQCAS---ALKSFEAECEVLKKIRHRNLIKVISSCSNDDFKALV 772 (790)
Q Consensus 697 ~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~~~---~~~~~~~e~~~l~~~~h~nlv~l~~~~~~~~~~~lv 772 (790)
.++|...+.||+|+||.||+|+. .+|+.||||.+...... ..+.+.+|+.++.+++||||+++++++.+.+..++|
T Consensus 10 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 89 (278)
T 3cok_A 10 IEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLV 89 (278)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEE
T ss_pred cccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEE
Confidence 35688999999999999999994 67899999999754321 236688999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHhcC
Q 039514 773 LEYMSNGSLGDWLHSS 788 (790)
Q Consensus 773 ~e~~~~G~L~~~l~~~ 788 (790)
|||+++|+|.+++...
T Consensus 90 ~e~~~~~~L~~~l~~~ 105 (278)
T 3cok_A 90 LEMCHNGEMNRYLKNR 105 (278)
T ss_dssp EECCTTEEHHHHHHTC
T ss_pred EecCCCCcHHHHHhhc
Confidence 9999999999998764
No 238
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=99.11 E-value=8.6e-11 Score=124.24 Aligned_cols=92 Identities=21% Similarity=0.275 Sum_probs=79.6
Q ss_pred HhcCccccceeccCCcEEEEEEEE-cCCcEEEEEEecccch---HHHHHHHHHHHHHhcC-CCCceeeEeeEEEeCCeEE
Q 039514 696 ATDNFAENNIIGRGGFGSVYGARL-EDGMKIAIKVFHQQCA---SALKSFEAECEVLKKI-RHRNLIKVISSCSNDDFKA 770 (790)
Q Consensus 696 ~~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~~-~h~nlv~l~~~~~~~~~~~ 770 (790)
...+|...++||+|+||.||+|+. .+++.||||.++.... ...+.+.+|..++..+ +||+|+++++++.+.+..|
T Consensus 18 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~ 97 (353)
T 2i0e_A 18 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY 97 (353)
T ss_dssp -CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEE
T ss_pred chHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEE
Confidence 357899999999999999999995 4588999999976432 2345678899999988 7999999999999999999
Q ss_pred EEEecCCCCCHHHHHhc
Q 039514 771 LVLEYMSNGSLGDWLHS 787 (790)
Q Consensus 771 lv~e~~~~G~L~~~l~~ 787 (790)
+||||+++|+|.++++.
T Consensus 98 lv~E~~~gg~L~~~l~~ 114 (353)
T 2i0e_A 98 FVMEYVNGGDLMYHIQQ 114 (353)
T ss_dssp EEEECCCSCBHHHHHHH
T ss_pred EEEeCCCCCcHHHHHHh
Confidence 99999999999999875
No 239
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=99.10 E-value=1.5e-10 Score=120.81 Aligned_cols=92 Identities=32% Similarity=0.544 Sum_probs=80.3
Q ss_pred hcCccccceeccCCcEEEEEEEE------cCCcEEEEEEecccc-hHHHHHHHHHHHHHhcCCCCceeeEeeEEEeCCeE
Q 039514 697 TDNFAENNIIGRGGFGSVYGARL------EDGMKIAIKVFHQQC-ASALKSFEAECEVLKKIRHRNLIKVISSCSNDDFK 769 (790)
Q Consensus 697 ~~~~~~~~~ig~g~~g~v~~~~~------~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~~~h~nlv~l~~~~~~~~~~ 769 (790)
.++|...+.||+|+||.||+|.. .+++.||||.+.... ....+.+.+|++++++++||||+++++++...+..
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 101 (314)
T 2ivs_A 22 RKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPL 101 (314)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSC
T ss_pred hhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCce
Confidence 46788899999999999999984 235789999997543 34456789999999999999999999999999999
Q ss_pred EEEEecCCCCCHHHHHhcC
Q 039514 770 ALVLEYMSNGSLGDWLHSS 788 (790)
Q Consensus 770 ~lv~e~~~~G~L~~~l~~~ 788 (790)
++||||+++|+|.++++..
T Consensus 102 ~lv~e~~~~~~L~~~l~~~ 120 (314)
T 2ivs_A 102 LLIVEYAKYGSLRGFLRES 120 (314)
T ss_dssp EEEEECCTTCBHHHHHHHT
T ss_pred EEEEeecCCCCHHHHHHHH
Confidence 9999999999999999764
No 240
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=99.10 E-value=9.1e-11 Score=123.14 Aligned_cols=91 Identities=26% Similarity=0.390 Sum_probs=78.8
Q ss_pred hcCccccceeccCCcEEEEEEE-EcCCcEEEEEEecccchH---HHHHHHHHHHHHhcCCCCceeeEeeEEEeCCeEEEE
Q 039514 697 TDNFAENNIIGRGGFGSVYGAR-LEDGMKIAIKVFHQQCAS---ALKSFEAECEVLKKIRHRNLIKVISSCSNDDFKALV 772 (790)
Q Consensus 697 ~~~~~~~~~ig~g~~g~v~~~~-~~~~~~vavK~~~~~~~~---~~~~~~~e~~~l~~~~h~nlv~l~~~~~~~~~~~lv 772 (790)
..+|...+.||+|+||.||+|. ..+++.||||.+...... ....+.+|+.+++.++||||+++++++...+..++|
T Consensus 8 i~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv 87 (336)
T 3h4j_B 8 IGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMV 87 (336)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence 3678899999999999999999 577899999999754322 134688999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHhcC
Q 039514 773 LEYMSNGSLGDWLHSS 788 (790)
Q Consensus 773 ~e~~~~G~L~~~l~~~ 788 (790)
|||+ +|+|.+++...
T Consensus 88 ~E~~-~g~l~~~l~~~ 102 (336)
T 3h4j_B 88 IEYA-GGELFDYIVEK 102 (336)
T ss_dssp ECCC-CEEHHHHHHHH
T ss_pred EECC-CCcHHHHHHHc
Confidence 9999 68999998653
No 241
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=99.10 E-value=1.1e-10 Score=122.02 Aligned_cols=91 Identities=19% Similarity=0.302 Sum_probs=78.2
Q ss_pred hcCccccceeccCCcEEEEEEEE-cCCcEEEEEEecccchHHHHHHHHHHHHHhcCCCCceeeEeeEEEe----CCeEEE
Q 039514 697 TDNFAENNIIGRGGFGSVYGARL-EDGMKIAIKVFHQQCASALKSFEAECEVLKKIRHRNLIKVISSCSN----DDFKAL 771 (790)
Q Consensus 697 ~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~~~h~nlv~l~~~~~~----~~~~~l 771 (790)
.++|...+.||+|+||.||++.. .+++.||||++........+.+.+|+.++.+++||||+++++++.. ....++
T Consensus 28 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~l 107 (317)
T 2buj_A 28 NKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWL 107 (317)
T ss_dssp TEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEEE
T ss_pred CeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeEE
Confidence 36789999999999999999994 6789999999977666666789999999999999999999999873 347899
Q ss_pred EEecCCCCCHHHHHhc
Q 039514 772 VLEYMSNGSLGDWLHS 787 (790)
Q Consensus 772 v~e~~~~G~L~~~l~~ 787 (790)
||||+++|+|.+++..
T Consensus 108 v~e~~~~~~L~~~l~~ 123 (317)
T 2buj_A 108 LLPFFKRGTLWNEIER 123 (317)
T ss_dssp EEECCTTCBHHHHHHH
T ss_pred EEEeCCCCcHHHHHHH
Confidence 9999999999999875
No 242
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=99.10 E-value=1.3e-10 Score=119.20 Aligned_cols=90 Identities=29% Similarity=0.440 Sum_probs=79.2
Q ss_pred cCccccceeccCCcEEEEEEEE-cCCcEEEEEEecccch------HHHHHHHHHHHHHhcCCCCceeeEeeEEEeCCeEE
Q 039514 698 DNFAENNIIGRGGFGSVYGARL-EDGMKIAIKVFHQQCA------SALKSFEAECEVLKKIRHRNLIKVISSCSNDDFKA 770 (790)
Q Consensus 698 ~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~~------~~~~~~~~e~~~l~~~~h~nlv~l~~~~~~~~~~~ 770 (790)
++|...+.||+|+||.||+|.. .+++.||||.+..... ...+.+.+|+.++.+++||||+++++++...+..+
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 84 (283)
T 3bhy_A 5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVV 84 (283)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred hhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeEE
Confidence 4588899999999999999995 4789999999865422 12567899999999999999999999999999999
Q ss_pred EEEecCCCCCHHHHHhc
Q 039514 771 LVLEYMSNGSLGDWLHS 787 (790)
Q Consensus 771 lv~e~~~~G~L~~~l~~ 787 (790)
+||||+++|+|.+++..
T Consensus 85 lv~e~~~~~~L~~~l~~ 101 (283)
T 3bhy_A 85 LILELVSGGELFDFLAE 101 (283)
T ss_dssp EEEECCCSCBHHHHHHH
T ss_pred EEEeecCCCcHHHHHHh
Confidence 99999999999999865
No 243
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=99.10 E-value=9.3e-11 Score=121.63 Aligned_cols=92 Identities=23% Similarity=0.419 Sum_probs=78.8
Q ss_pred HhcCccccceeccCCcEEEEEEEE-cCCcEEEEEEecccchHHHHHHHHHHHHHhcCCCCceeeEeeEEEeCCeEEEEEe
Q 039514 696 ATDNFAENNIIGRGGFGSVYGARL-EDGMKIAIKVFHQQCASALKSFEAECEVLKKIRHRNLIKVISSCSNDDFKALVLE 774 (790)
Q Consensus 696 ~~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~~~h~nlv~l~~~~~~~~~~~lv~e 774 (790)
..+.|+..+.||+|+||.||+|.. .+++.||+|.+........+.+.+|+.++.+++||||+++++++..++..++|||
T Consensus 17 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 96 (302)
T 2j7t_A 17 PNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIE 96 (302)
T ss_dssp GGGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEE
T ss_pred CccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEE
Confidence 457789999999999999999995 4689999999976655556778999999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhc
Q 039514 775 YMSNGSLGDWLHS 787 (790)
Q Consensus 775 ~~~~G~L~~~l~~ 787 (790)
|+++|+|.+++..
T Consensus 97 ~~~~~~l~~~~~~ 109 (302)
T 2j7t_A 97 FCPGGAVDAIMLE 109 (302)
T ss_dssp CCTTEEHHHHHHH
T ss_pred eCCCCcHHHHHHh
Confidence 9999999998864
No 244
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=99.10 E-value=2.1e-10 Score=120.47 Aligned_cols=90 Identities=26% Similarity=0.451 Sum_probs=79.9
Q ss_pred cCccccceeccCCcEEEEEEEE-----cCCcEEEEEEecccchHHHHHHHHHHHHHhcCCCCceeeEeeEEE--eCCeEE
Q 039514 698 DNFAENNIIGRGGFGSVYGARL-----EDGMKIAIKVFHQQCASALKSFEAECEVLKKIRHRNLIKVISSCS--NDDFKA 770 (790)
Q Consensus 698 ~~~~~~~~ig~g~~g~v~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~~~h~nlv~l~~~~~--~~~~~~ 770 (790)
++|+..+.||+|+||.||+|++ .+++.||||++........+.+.+|++++++++||||+++++++. .....+
T Consensus 23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 102 (327)
T 3lxl_A 23 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLR 102 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEEE
T ss_pred hhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceEE
Confidence 6788899999999999999984 467899999998776666678999999999999999999999987 456789
Q ss_pred EEEecCCCCCHHHHHhc
Q 039514 771 LVLEYMSNGSLGDWLHS 787 (790)
Q Consensus 771 lv~e~~~~G~L~~~l~~ 787 (790)
+||||+++|+|.+++..
T Consensus 103 lv~e~~~~~~L~~~l~~ 119 (327)
T 3lxl_A 103 LVMEYLPSGCLRDFLQR 119 (327)
T ss_dssp EEEECCTTCBHHHHHHH
T ss_pred EEEeecCCCCHHHHHHh
Confidence 99999999999999875
No 245
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=99.10 E-value=1.4e-10 Score=118.66 Aligned_cols=92 Identities=26% Similarity=0.438 Sum_probs=80.0
Q ss_pred HhcCccccceeccCCcEEEEEEE-EcCCcEEEEEEecccchH---HHHHHHHHHHHHhcCCCCceeeEeeEEEeCCeEEE
Q 039514 696 ATDNFAENNIIGRGGFGSVYGAR-LEDGMKIAIKVFHQQCAS---ALKSFEAECEVLKKIRHRNLIKVISSCSNDDFKAL 771 (790)
Q Consensus 696 ~~~~~~~~~~ig~g~~g~v~~~~-~~~~~~vavK~~~~~~~~---~~~~~~~e~~~l~~~~h~nlv~l~~~~~~~~~~~l 771 (790)
+.++|...+.||+|+||.||+|. ..+++.||||.+...... ....+.+|+.++++++||||+++++++.+.+..++
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 86 (279)
T 3fdn_A 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYL 86 (279)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred ecccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEE
Confidence 34678999999999999999998 456789999999654322 24568899999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHhc
Q 039514 772 VLEYMSNGSLGDWLHS 787 (790)
Q Consensus 772 v~e~~~~G~L~~~l~~ 787 (790)
||||+++|+|.+++..
T Consensus 87 v~e~~~~~~l~~~l~~ 102 (279)
T 3fdn_A 87 ILEYAPLGTVYRELQK 102 (279)
T ss_dssp EECCCTTEEHHHHHHH
T ss_pred EEecCCCCcHHHHHHh
Confidence 9999999999999865
No 246
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=99.10 E-value=5.5e-11 Score=123.89 Aligned_cols=92 Identities=26% Similarity=0.450 Sum_probs=78.2
Q ss_pred hcCccccceeccCCcEEEEEEE-EcCCcEEEEEEecccc---hHHHHHHHHHHHHHhcCCCCceeeEeeEEEeCC----e
Q 039514 697 TDNFAENNIIGRGGFGSVYGAR-LEDGMKIAIKVFHQQC---ASALKSFEAECEVLKKIRHRNLIKVISSCSNDD----F 768 (790)
Q Consensus 697 ~~~~~~~~~ig~g~~g~v~~~~-~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~~~h~nlv~l~~~~~~~~----~ 768 (790)
.++|...+.||+|+||.||+|. ..+++.||||.+.... ......+.+|+.++.+++||||+++++++.... .
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~ 90 (311)
T 3ork_A 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPL 90 (311)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEE
T ss_pred cCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCcc
Confidence 3678999999999999999999 5778999999997643 233457889999999999999999999987643 3
Q ss_pred EEEEEecCCCCCHHHHHhcC
Q 039514 769 KALVLEYMSNGSLGDWLHSS 788 (790)
Q Consensus 769 ~~lv~e~~~~G~L~~~l~~~ 788 (790)
.|+||||+++|+|.++++..
T Consensus 91 ~~lv~e~~~g~~L~~~l~~~ 110 (311)
T 3ork_A 91 PYIVMEYVDGVTLRDIVHTE 110 (311)
T ss_dssp EEEEEECCCEEEHHHHHHHH
T ss_pred cEEEEecCCCCCHHHHHHhc
Confidence 49999999999999998753
No 247
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=99.10 E-value=9.3e-11 Score=128.81 Aligned_cols=90 Identities=30% Similarity=0.511 Sum_probs=79.0
Q ss_pred HhcCccccceeccCCcEEEEEEEEcCCcEEEEEEecccchHHHHHHHHHHHHHhcCCCCceeeEeeEEEeCCeEEEEEec
Q 039514 696 ATDNFAENNIIGRGGFGSVYGARLEDGMKIAIKVFHQQCASALKSFEAECEVLKKIRHRNLIKVISSCSNDDFKALVLEY 775 (790)
Q Consensus 696 ~~~~~~~~~~ig~g~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~~~h~nlv~l~~~~~~~~~~~lv~e~ 775 (790)
..++|...+.||+|+||.||+|....+..||||.++.... ..++|.+|+++|++++|||||++++++.+ +..++||||
T Consensus 182 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv~e~ 259 (452)
T 1fmk_A 182 PRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEY 259 (452)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTSS-CHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECC
T ss_pred ChhHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCCC-CHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEEehh
Confidence 3466888999999999999999988778899999986543 24679999999999999999999999876 678999999
Q ss_pred CCCCCHHHHHhc
Q 039514 776 MSNGSLGDWLHS 787 (790)
Q Consensus 776 ~~~G~L~~~l~~ 787 (790)
|++|+|.++++.
T Consensus 260 ~~~gsL~~~l~~ 271 (452)
T 1fmk_A 260 MSKGSLLDFLKG 271 (452)
T ss_dssp CTTCBHHHHHSH
T ss_pred hcCCCHHHHHHh
Confidence 999999999864
No 248
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=99.10 E-value=1.5e-10 Score=120.48 Aligned_cols=91 Identities=23% Similarity=0.429 Sum_probs=77.7
Q ss_pred hcCccccceeccCCcEEEEEEEEcCCcEEEEEEecccch--HHHHHHHHHHHHHhcCCCCceeeEeeEEEeCCeEEEEEe
Q 039514 697 TDNFAENNIIGRGGFGSVYGARLEDGMKIAIKVFHQQCA--SALKSFEAECEVLKKIRHRNLIKVISSCSNDDFKALVLE 774 (790)
Q Consensus 697 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~~~h~nlv~l~~~~~~~~~~~lv~e 774 (790)
.++|+..+.||+|+||.||+|...+|+.||||++..... ...+.+.+|++++++++|||||++++++.+++..++|||
T Consensus 20 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 99 (311)
T 3niz_A 20 MEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFE 99 (311)
T ss_dssp SCEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEEE
T ss_pred HhhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEEc
Confidence 467889999999999999999987899999999975432 234678899999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhcC
Q 039514 775 YMSNGSLGDWLHSS 788 (790)
Q Consensus 775 ~~~~G~L~~~l~~~ 788 (790)
|+++ +|.+++...
T Consensus 100 ~~~~-~l~~~~~~~ 112 (311)
T 3niz_A 100 FMEK-DLKKVLDEN 112 (311)
T ss_dssp CCSE-EHHHHHHTC
T ss_pred CCCC-CHHHHHHhc
Confidence 9985 888887654
No 249
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=99.10 E-value=2.2e-10 Score=117.59 Aligned_cols=92 Identities=23% Similarity=0.473 Sum_probs=80.6
Q ss_pred hcCccccceeccCCcEEEEEEE-EcCCcEEEEEEecccc--hHHHHHHHHHHHHHhcCCCCceeeEeeEEEeCCeEEEEE
Q 039514 697 TDNFAENNIIGRGGFGSVYGAR-LEDGMKIAIKVFHQQC--ASALKSFEAECEVLKKIRHRNLIKVISSCSNDDFKALVL 773 (790)
Q Consensus 697 ~~~~~~~~~ig~g~~g~v~~~~-~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~~~h~nlv~l~~~~~~~~~~~lv~ 773 (790)
.++|+..+.||+|+||.||+|. ..+++.||+|.+.... ....+.+.+|+.++.+++||||+++++++..++..++||
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 84 (284)
T 3kk8_A 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF 84 (284)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEE
Confidence 4679999999999999999999 4568999999997543 334567889999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhcC
Q 039514 774 EYMSNGSLGDWLHSS 788 (790)
Q Consensus 774 e~~~~G~L~~~l~~~ 788 (790)
||+++|+|.+++...
T Consensus 85 e~~~~~~l~~~~~~~ 99 (284)
T 3kk8_A 85 DLVTGGELFEDIVAR 99 (284)
T ss_dssp CCCCSCBHHHHHHHH
T ss_pred ecCCCCCHHHHHHhc
Confidence 999999999887653
No 250
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=99.09 E-value=2.1e-10 Score=118.49 Aligned_cols=91 Identities=16% Similarity=0.307 Sum_probs=79.8
Q ss_pred hcCccccceeccCCcEEEEEEEE-cCCcEEEEEEecccc---hHHHHHHHHHHHHHhcCCCCceeeEeeEEEeCCeEEEE
Q 039514 697 TDNFAENNIIGRGGFGSVYGARL-EDGMKIAIKVFHQQC---ASALKSFEAECEVLKKIRHRNLIKVISSCSNDDFKALV 772 (790)
Q Consensus 697 ~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~~~h~nlv~l~~~~~~~~~~~lv 772 (790)
.++|...+.||+|+||.||++.. .+++.||+|.+.... ....+.+.+|+.++++++||||+++++++.+++..++|
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 93 (294)
T 2rku_A 14 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV 93 (294)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEE
Confidence 36788899999999999999994 568899999986542 33456788999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHhc
Q 039514 773 LEYMSNGSLGDWLHS 787 (790)
Q Consensus 773 ~e~~~~G~L~~~l~~ 787 (790)
|||+++|+|.+++..
T Consensus 94 ~e~~~~~~L~~~~~~ 108 (294)
T 2rku_A 94 LELCRRRSLLELHKR 108 (294)
T ss_dssp EECCTTCBHHHHHHH
T ss_pred EecCCCCCHHHHHHh
Confidence 999999999998865
No 251
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=99.09 E-value=2.5e-10 Score=118.80 Aligned_cols=91 Identities=34% Similarity=0.461 Sum_probs=78.6
Q ss_pred hcCccccceeccCCcEEEEEEE-EcCCcEEEEEEeccc---chHHHHHHHHHHHHHhcCCCCceeeEeeEEEeCCeEEEE
Q 039514 697 TDNFAENNIIGRGGFGSVYGAR-LEDGMKIAIKVFHQQ---CASALKSFEAECEVLKKIRHRNLIKVISSCSNDDFKALV 772 (790)
Q Consensus 697 ~~~~~~~~~ig~g~~g~v~~~~-~~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~~~h~nlv~l~~~~~~~~~~~lv 772 (790)
..+|...+.||+|+||.||+|. ..+|+.||||.+... .....+.+.+|+.++.+++||||+++++++..++..++|
T Consensus 31 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv 110 (310)
T 2wqm_A 31 LANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIV 110 (310)
T ss_dssp GGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred ccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEEE
Confidence 4578999999999999999999 467899999999752 234456789999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHhc
Q 039514 773 LEYMSNGSLGDWLHS 787 (790)
Q Consensus 773 ~e~~~~G~L~~~l~~ 787 (790)
|||+++|+|.+++..
T Consensus 111 ~e~~~~~~L~~~l~~ 125 (310)
T 2wqm_A 111 LELADAGDLSRMIKH 125 (310)
T ss_dssp EECCCSCBHHHHHHH
T ss_pred EecCCCCCHHHHHHH
Confidence 999999999999864
No 252
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=99.09 E-value=1.7e-10 Score=121.62 Aligned_cols=92 Identities=27% Similarity=0.594 Sum_probs=79.1
Q ss_pred hcCccccceeccCCcEEEEEEEE--------cCCcEEEEEEecccc-hHHHHHHHHHHHHHhcC-CCCceeeEeeEEEeC
Q 039514 697 TDNFAENNIIGRGGFGSVYGARL--------EDGMKIAIKVFHQQC-ASALKSFEAECEVLKKI-RHRNLIKVISSCSND 766 (790)
Q Consensus 697 ~~~~~~~~~ig~g~~g~v~~~~~--------~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~~-~h~nlv~l~~~~~~~ 766 (790)
.++|...+.||+|+||.||+|.. .+++.||||++.... ....+.+.+|++++.++ +||||+++++++..+
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~ 113 (334)
T 2pvf_A 34 RDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 113 (334)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred HhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEccC
Confidence 46788999999999999999985 346789999997643 34456789999999999 899999999999999
Q ss_pred CeEEEEEecCCCCCHHHHHhcC
Q 039514 767 DFKALVLEYMSNGSLGDWLHSS 788 (790)
Q Consensus 767 ~~~~lv~e~~~~G~L~~~l~~~ 788 (790)
+..++||||+++|+|.++++..
T Consensus 114 ~~~~lv~e~~~~~~L~~~l~~~ 135 (334)
T 2pvf_A 114 GPLYVIVEYASKGNLREYLRAR 135 (334)
T ss_dssp SCCEEEEECCTTCBHHHHHHTT
T ss_pred CceEEEEECCCCCcHHHHHHHh
Confidence 9999999999999999999764
No 253
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=99.09 E-value=2.6e-10 Score=116.52 Aligned_cols=91 Identities=27% Similarity=0.425 Sum_probs=80.0
Q ss_pred hcCccccceeccCCcEEEEEEEE-cCCcEEEEEEecccch---HHHHHHHHHHHHHhcCCCCceeeEeeEEEeCCeEEEE
Q 039514 697 TDNFAENNIIGRGGFGSVYGARL-EDGMKIAIKVFHQQCA---SALKSFEAECEVLKKIRHRNLIKVISSCSNDDFKALV 772 (790)
Q Consensus 697 ~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~~~h~nlv~l~~~~~~~~~~~lv 772 (790)
.++|...+.||+|+||.||+|.. .+|+.||||.+..... ...+.+.+|+..+++++||||+++++++...+..++|
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 89 (276)
T 2h6d_A 10 IGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMV 89 (276)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred eccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEE
Confidence 36788999999999999999995 4789999999976432 2245788999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHhc
Q 039514 773 LEYMSNGSLGDWLHS 787 (790)
Q Consensus 773 ~e~~~~G~L~~~l~~ 787 (790)
|||+++|+|.+++..
T Consensus 90 ~e~~~~~~L~~~l~~ 104 (276)
T 2h6d_A 90 MEYVSGGELFDYICK 104 (276)
T ss_dssp EECCCSCBHHHHHHH
T ss_pred EeccCCCcHHHHHhc
Confidence 999999999999865
No 254
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=99.09 E-value=2.2e-10 Score=118.52 Aligned_cols=93 Identities=24% Similarity=0.373 Sum_probs=80.1
Q ss_pred HhcCccccceeccCCcEEEEEEEE-cCCcEEEEEEecccc---------hHHHHHHHHHHHHHhcCC-CCceeeEeeEEE
Q 039514 696 ATDNFAENNIIGRGGFGSVYGARL-EDGMKIAIKVFHQQC---------ASALKSFEAECEVLKKIR-HRNLIKVISSCS 764 (790)
Q Consensus 696 ~~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~---------~~~~~~~~~e~~~l~~~~-h~nlv~l~~~~~ 764 (790)
..++|...+.||+|+||.||+|.. .+|+.||||.+.... ....+.+.+|++++.++. ||||+++++++.
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~ 94 (298)
T 1phk_A 15 FYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYE 94 (298)
T ss_dssp CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEE
T ss_pred hhhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeec
Confidence 347899999999999999999994 578999999996432 122456889999999995 999999999999
Q ss_pred eCCeEEEEEecCCCCCHHHHHhcC
Q 039514 765 NDDFKALVLEYMSNGSLGDWLHSS 788 (790)
Q Consensus 765 ~~~~~~lv~e~~~~G~L~~~l~~~ 788 (790)
.++..++||||+++|+|.+++...
T Consensus 95 ~~~~~~lv~e~~~~~~L~~~l~~~ 118 (298)
T 1phk_A 95 TNTFFFLVFDLMKKGELFDYLTEK 118 (298)
T ss_dssp CSSEEEEEEECCTTCBHHHHHHHH
T ss_pred cCCeEEEEEeccCCCcHHHHHhcc
Confidence 999999999999999999998753
No 255
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=99.09 E-value=1.1e-10 Score=129.91 Aligned_cols=91 Identities=24% Similarity=0.339 Sum_probs=75.7
Q ss_pred hcCccccceeccCCcEEEEEEE-EcCCcEEEEEEecccch--HHHHHHHHHHHHHhcCCCCceeeEeeEEEeCCeEEEEE
Q 039514 697 TDNFAENNIIGRGGFGSVYGAR-LEDGMKIAIKVFHQQCA--SALKSFEAECEVLKKIRHRNLIKVISSCSNDDFKALVL 773 (790)
Q Consensus 697 ~~~~~~~~~ig~g~~g~v~~~~-~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~~~h~nlv~l~~~~~~~~~~~lv~ 773 (790)
.+.|...+.||+|+||.||+|. ..+++.||||.+..... .....+.+|+.+++.++|||||+++++|...+..|+||
T Consensus 36 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 115 (494)
T 3lij_A 36 SEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVM 115 (494)
T ss_dssp HHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 3568899999999999999999 45789999999975432 23466889999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhc
Q 039514 774 EYMSNGSLGDWLHS 787 (790)
Q Consensus 774 e~~~~G~L~~~l~~ 787 (790)
||+++|+|.+++..
T Consensus 116 e~~~~g~L~~~~~~ 129 (494)
T 3lij_A 116 ECYKGGELFDEIIH 129 (494)
T ss_dssp ECCCSCBHHHHHHH
T ss_pred ecCCCCcHHHHHHH
Confidence 99999999998865
No 256
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=99.09 E-value=1.4e-10 Score=120.92 Aligned_cols=92 Identities=22% Similarity=0.464 Sum_probs=80.5
Q ss_pred hcCccccceeccCCcEEEEEEEE------cCCcEEEEEEecccch-HHHHHHHHHHHHHhcC-CCCceeeEeeEEEeCCe
Q 039514 697 TDNFAENNIIGRGGFGSVYGARL------EDGMKIAIKVFHQQCA-SALKSFEAECEVLKKI-RHRNLIKVISSCSNDDF 768 (790)
Q Consensus 697 ~~~~~~~~~ig~g~~g~v~~~~~------~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~~-~h~nlv~l~~~~~~~~~ 768 (790)
.++|...+.||+|+||.||+|.. .+++.||||.+..... ...+.+.+|+.++.++ +||||+++++++..++.
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~ 101 (313)
T 1t46_A 22 RNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGP 101 (313)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred hhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCCC
Confidence 46788899999999999999984 3467899999976543 3456789999999999 89999999999999999
Q ss_pred EEEEEecCCCCCHHHHHhcC
Q 039514 769 KALVLEYMSNGSLGDWLHSS 788 (790)
Q Consensus 769 ~~lv~e~~~~G~L~~~l~~~ 788 (790)
.++||||+++|+|.++++..
T Consensus 102 ~~lv~e~~~~~~L~~~l~~~ 121 (313)
T 1t46_A 102 TLVITEYCCYGDLLNFLRRK 121 (313)
T ss_dssp CEEEEECCTTEEHHHHHHHT
T ss_pred cEEEEecCCCCCHHHHHHhc
Confidence 99999999999999999764
No 257
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=99.09 E-value=7.1e-11 Score=129.69 Aligned_cols=92 Identities=25% Similarity=0.356 Sum_probs=72.5
Q ss_pred hcCccccceeccCCcEEEEEEE-EcCCcEEEEEEecccc---hHHHHHHHHHHHHHhcCCCCceeeEeeEEEeCCeEEEE
Q 039514 697 TDNFAENNIIGRGGFGSVYGAR-LEDGMKIAIKVFHQQC---ASALKSFEAECEVLKKIRHRNLIKVISSCSNDDFKALV 772 (790)
Q Consensus 697 ~~~~~~~~~ig~g~~g~v~~~~-~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~~~h~nlv~l~~~~~~~~~~~lv 772 (790)
.++|+..+.||+|+||.||+|. ..+|+.||||.+.... ......+.+|+.++.+++||||+++++++...+..++|
T Consensus 147 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 226 (446)
T 4ejn_A 147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFV 226 (446)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEE
T ss_pred hHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEE
Confidence 3679999999999999999998 5678999999997642 22345678899999999999999999999999999999
Q ss_pred EecCCCCCHHHHHhcC
Q 039514 773 LEYMSNGSLGDWLHSS 788 (790)
Q Consensus 773 ~e~~~~G~L~~~l~~~ 788 (790)
||||++|+|.+++...
T Consensus 227 ~e~~~~~~L~~~l~~~ 242 (446)
T 4ejn_A 227 MEYANGGELFFHLSRE 242 (446)
T ss_dssp ECCCSSCBHHHHHHHH
T ss_pred EeeCCCCcHHHHHHhc
Confidence 9999999999998653
No 258
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=99.09 E-value=1.7e-10 Score=128.36 Aligned_cols=91 Identities=22% Similarity=0.402 Sum_probs=80.1
Q ss_pred cCccccceeccCCcEEEEEEEE-cCCcEEEEEEecccchH---HHHHHHHHHHHHhcCCCCceeeEeeEEEeCCeEEEEE
Q 039514 698 DNFAENNIIGRGGFGSVYGARL-EDGMKIAIKVFHQQCAS---ALKSFEAECEVLKKIRHRNLIKVISSCSNDDFKALVL 773 (790)
Q Consensus 698 ~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~~~---~~~~~~~e~~~l~~~~h~nlv~l~~~~~~~~~~~lv~ 773 (790)
++|...++||+|+||.||+|+. .+|+.||||++...... ..+.+.+|+.++.+++|||||++++++.+.+..|+||
T Consensus 185 ~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVm 264 (543)
T 3c4z_A 185 DWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVM 264 (543)
T ss_dssp GGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEEE
Confidence 6788889999999999999995 57999999999764322 2356889999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhcC
Q 039514 774 EYMSNGSLGDWLHSS 788 (790)
Q Consensus 774 e~~~~G~L~~~l~~~ 788 (790)
||+++|+|.+++...
T Consensus 265 E~~~gg~L~~~l~~~ 279 (543)
T 3c4z_A 265 TIMNGGDIRYHIYNV 279 (543)
T ss_dssp CCCTTCBHHHHHHTS
T ss_pred EeccCCCHHHHHHHh
Confidence 999999999998753
No 259
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=99.09 E-value=2.2e-10 Score=120.71 Aligned_cols=91 Identities=16% Similarity=0.307 Sum_probs=80.1
Q ss_pred hcCccccceeccCCcEEEEEEEE-cCCcEEEEEEecccc---hHHHHHHHHHHHHHhcCCCCceeeEeeEEEeCCeEEEE
Q 039514 697 TDNFAENNIIGRGGFGSVYGARL-EDGMKIAIKVFHQQC---ASALKSFEAECEVLKKIRHRNLIKVISSCSNDDFKALV 772 (790)
Q Consensus 697 ~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~~~h~nlv~l~~~~~~~~~~~lv 772 (790)
.++|...+.||+|+||.||++.. .+++.||+|.+.... ....+.+.+|+.++++++||||+++++++.+.+..|+|
T Consensus 40 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 119 (335)
T 2owb_A 40 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV 119 (335)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred CCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEE
Confidence 46788899999999999999994 568899999987542 33456788999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHhc
Q 039514 773 LEYMSNGSLGDWLHS 787 (790)
Q Consensus 773 ~e~~~~G~L~~~l~~ 787 (790)
|||+++|+|.+++..
T Consensus 120 ~e~~~~~~L~~~~~~ 134 (335)
T 2owb_A 120 LELCRRRSLLELHKR 134 (335)
T ss_dssp ECCCTTCBHHHHHHH
T ss_pred EecCCCCCHHHHHhc
Confidence 999999999998865
No 260
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=99.08 E-value=1.1e-10 Score=123.19 Aligned_cols=88 Identities=23% Similarity=0.347 Sum_probs=76.2
Q ss_pred hcCccccceeccCCcEEEEEEE-EcCCcEEEEEEecccchHHHHHHHHHHHHHhcC-CCCceeeEeeEEEeCCeEEEEEe
Q 039514 697 TDNFAENNIIGRGGFGSVYGAR-LEDGMKIAIKVFHQQCASALKSFEAECEVLKKI-RHRNLIKVISSCSNDDFKALVLE 774 (790)
Q Consensus 697 ~~~~~~~~~ig~g~~g~v~~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~~-~h~nlv~l~~~~~~~~~~~lv~e 774 (790)
.++|+..+.||+|+||.||+|. ..+++.||||.+..... ...+|++++.++ +|||||++++++.+++..|+|||
T Consensus 21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~----~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E 96 (342)
T 2qr7_A 21 TDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR----DPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTE 96 (342)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC----CCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEEC
T ss_pred cccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC----ChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEEe
Confidence 4668999999999999999999 45789999999976532 234678888877 79999999999999999999999
Q ss_pred cCCCCCHHHHHhcC
Q 039514 775 YMSNGSLGDWLHSS 788 (790)
Q Consensus 775 ~~~~G~L~~~l~~~ 788 (790)
|+++|+|.+++...
T Consensus 97 ~~~gg~L~~~i~~~ 110 (342)
T 2qr7_A 97 LMKGGELLDKILRQ 110 (342)
T ss_dssp CCCSCBHHHHHHTC
T ss_pred CCCCCcHHHHHHHc
Confidence 99999999998764
No 261
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=99.08 E-value=1.7e-10 Score=117.53 Aligned_cols=91 Identities=26% Similarity=0.479 Sum_probs=74.6
Q ss_pred hcCccccceeccCCcEEEEEEEEcCCcEEEEEEecccch----HHHHHHHHHHHHHhcCCCCceeeEeeEEEeCCeEEEE
Q 039514 697 TDNFAENNIIGRGGFGSVYGARLEDGMKIAIKVFHQQCA----SALKSFEAECEVLKKIRHRNLIKVISSCSNDDFKALV 772 (790)
Q Consensus 697 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~vavK~~~~~~~----~~~~~~~~e~~~l~~~~h~nlv~l~~~~~~~~~~~lv 772 (790)
.++|+..+.||+|+||.||+|... ++.||||.+..... ...+.+.+|++++..++||||+++++++..++..++|
T Consensus 6 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 84 (271)
T 3dtc_A 6 FAELTLEEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLV 84 (271)
T ss_dssp TTSEEEEEEEEEETTEEEEEEEET-TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEE
T ss_pred hhheeeeeeeccCCCeEEEEEEEc-CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEE
Confidence 357888999999999999999864 88999999875432 2245788999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHhcC
Q 039514 773 LEYMSNGSLGDWLHSS 788 (790)
Q Consensus 773 ~e~~~~G~L~~~l~~~ 788 (790)
|||+++|+|.++++..
T Consensus 85 ~e~~~~~~L~~~~~~~ 100 (271)
T 3dtc_A 85 MEFARGGPLNRVLSGK 100 (271)
T ss_dssp EECCTTEEHHHHHTSS
T ss_pred EEcCCCCCHHHHhhcC
Confidence 9999999999998643
No 262
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=99.08 E-value=9.7e-11 Score=124.80 Aligned_cols=92 Identities=29% Similarity=0.422 Sum_probs=71.3
Q ss_pred hcCccccceeccCCcEEEEEEEE-cCCcEEEEEEecccch---HHHHHHHHHHHH-HhcCCCCceeeEeeEEEeCCeEEE
Q 039514 697 TDNFAENNIIGRGGFGSVYGARL-EDGMKIAIKVFHQQCA---SALKSFEAECEV-LKKIRHRNLIKVISSCSNDDFKAL 771 (790)
Q Consensus 697 ~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~~---~~~~~~~~e~~~-l~~~~h~nlv~l~~~~~~~~~~~l 771 (790)
.++|+..++||+|+||.||+|+. .+++.||||+++.... .....+.+|..+ ++.++|||||++++++.+.+..|+
T Consensus 37 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~l 116 (373)
T 2r5t_A 37 PSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYF 116 (373)
T ss_dssp GGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEE
Confidence 36799999999999999999994 5688999999976432 223456677776 567899999999999999999999
Q ss_pred EEecCCCCCHHHHHhcC
Q 039514 772 VLEYMSNGSLGDWLHSS 788 (790)
Q Consensus 772 v~e~~~~G~L~~~l~~~ 788 (790)
||||+++|+|.+++++.
T Consensus 117 v~E~~~gg~L~~~l~~~ 133 (373)
T 2r5t_A 117 VLDYINGGELFYHLQRE 133 (373)
T ss_dssp EEECCCSCBHHHHHHHH
T ss_pred EEeCCCCCcHHHHHHhc
Confidence 99999999999998753
No 263
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=99.08 E-value=1.9e-10 Score=123.47 Aligned_cols=92 Identities=28% Similarity=0.555 Sum_probs=79.5
Q ss_pred hcCccccceeccCCcEEEEEEEE-c-------CCcEEEEEEecccc-hHHHHHHHHHHHHHhcC-CCCceeeEeeEEEeC
Q 039514 697 TDNFAENNIIGRGGFGSVYGARL-E-------DGMKIAIKVFHQQC-ASALKSFEAECEVLKKI-RHRNLIKVISSCSND 766 (790)
Q Consensus 697 ~~~~~~~~~ig~g~~g~v~~~~~-~-------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~~-~h~nlv~l~~~~~~~ 766 (790)
.++|...+.||+|+||.||+|+. . +++.||||++.... ....+++.+|++++.++ +|||||++++++..+
T Consensus 68 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~ 147 (382)
T 3tt0_A 68 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD 147 (382)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred hhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeeccC
Confidence 46788899999999999999984 2 23579999997643 34456789999999999 899999999999999
Q ss_pred CeEEEEEecCCCCCHHHHHhcC
Q 039514 767 DFKALVLEYMSNGSLGDWLHSS 788 (790)
Q Consensus 767 ~~~~lv~e~~~~G~L~~~l~~~ 788 (790)
+..++||||+++|+|.++++..
T Consensus 148 ~~~~lv~e~~~~g~L~~~l~~~ 169 (382)
T 3tt0_A 148 GPLYVIVEYASKGNLREYLQAR 169 (382)
T ss_dssp SSCEEEEECCTTCBHHHHHHHT
T ss_pred CceEEEEEecCCCcHHHHHHHh
Confidence 9999999999999999999764
No 264
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=99.08 E-value=2.3e-10 Score=119.03 Aligned_cols=93 Identities=15% Similarity=0.255 Sum_probs=80.8
Q ss_pred HhcCccccceeccCCcEEEEEEEE-cCCcEEEEEEecccch---HHHHHHHHHHHHHhcCCCCceeeEeeEEEeCCeEEE
Q 039514 696 ATDNFAENNIIGRGGFGSVYGARL-EDGMKIAIKVFHQQCA---SALKSFEAECEVLKKIRHRNLIKVISSCSNDDFKAL 771 (790)
Q Consensus 696 ~~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~~~h~nlv~l~~~~~~~~~~~l 771 (790)
..++|...+.||+|+||.||+|.. .+++.||||.+..... ...+.+.+|+.++.+++||||+++++++..++..++
T Consensus 32 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~l 111 (309)
T 2h34_A 32 QFGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYV 111 (309)
T ss_dssp --CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEE
T ss_pred EeccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEE
Confidence 347899999999999999999994 5789999999975432 234678899999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHhcC
Q 039514 772 VLEYMSNGSLGDWLHSS 788 (790)
Q Consensus 772 v~e~~~~G~L~~~l~~~ 788 (790)
||||+++|+|.++++..
T Consensus 112 v~e~~~~~~L~~~l~~~ 128 (309)
T 2h34_A 112 DMRLINGVDLAAMLRRQ 128 (309)
T ss_dssp EEECCCCEEHHHHHHHH
T ss_pred EEEecCCCCHHHHHHhc
Confidence 99999999999998753
No 265
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=99.08 E-value=2.4e-10 Score=119.98 Aligned_cols=92 Identities=32% Similarity=0.563 Sum_probs=79.3
Q ss_pred hcCccccceeccCCcEEEEEEEE-----cCCcEEEEEEecccchHHHHHHHHHHHHHhcCCCCceeeEeeEEEeCC--eE
Q 039514 697 TDNFAENNIIGRGGFGSVYGARL-----EDGMKIAIKVFHQQCASALKSFEAECEVLKKIRHRNLIKVISSCSNDD--FK 769 (790)
Q Consensus 697 ~~~~~~~~~ig~g~~g~v~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~~~h~nlv~l~~~~~~~~--~~ 769 (790)
.++|...+.||+|+||.||+|.+ .+++.||||.+........+.+.+|++++++++||||+++++++...+ ..
T Consensus 40 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 119 (326)
T 2w1i_A 40 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNL 119 (326)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CC
T ss_pred HHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCce
Confidence 35688899999999999999984 368899999998766666678999999999999999999999987643 68
Q ss_pred EEEEecCCCCCHHHHHhcC
Q 039514 770 ALVLEYMSNGSLGDWLHSS 788 (790)
Q Consensus 770 ~lv~e~~~~G~L~~~l~~~ 788 (790)
++||||+++|+|.++++..
T Consensus 120 ~lv~e~~~~~~L~~~l~~~ 138 (326)
T 2w1i_A 120 KLIMEYLPYGSLRDYLQKH 138 (326)
T ss_dssp EEEECCCTTCBHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHhc
Confidence 9999999999999999764
No 266
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=99.08 E-value=2.4e-10 Score=119.78 Aligned_cols=83 Identities=19% Similarity=0.312 Sum_probs=73.6
Q ss_pred cceeccCCcEEEEEEEE-cCCcEEEEEEecccchHHHHHHHHHHHHHhcCC-CCceeeEeeEEEeCCeEEEEEecCCCCC
Q 039514 703 NNIIGRGGFGSVYGARL-EDGMKIAIKVFHQQCASALKSFEAECEVLKKIR-HRNLIKVISSCSNDDFKALVLEYMSNGS 780 (790)
Q Consensus 703 ~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~~~-h~nlv~l~~~~~~~~~~~lv~e~~~~G~ 780 (790)
.+.||+|+||.||+|.. .+++.||||.+.... ...+.+|+.++.++. |||||++++++.+++..|+||||+++|+
T Consensus 16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~~ 92 (325)
T 3kn6_A 16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKRM---EANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGE 92 (325)
T ss_dssp SCCSEEETTEEEEEEEETTTCCEEEEEEEEGGG---HHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCB
T ss_pred CCccccCCCeEEEEEEECCCCCEEEEEEEChhh---hhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCCc
Confidence 47899999999999994 578999999997542 345778999999997 9999999999999999999999999999
Q ss_pred HHHHHhcC
Q 039514 781 LGDWLHSS 788 (790)
Q Consensus 781 L~~~l~~~ 788 (790)
|.++++..
T Consensus 93 L~~~l~~~ 100 (325)
T 3kn6_A 93 LFERIKKK 100 (325)
T ss_dssp HHHHHHHC
T ss_pred HHHHHHhc
Confidence 99999764
No 267
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=99.08 E-value=1.4e-10 Score=121.21 Aligned_cols=90 Identities=20% Similarity=0.440 Sum_probs=65.0
Q ss_pred hcCccccceeccCCcEEEEEEE-EcCCcEEEEEEecccch-HHHHHHHHHHHHHhcCCCCceeeEeeEEEeCCeEEEEEe
Q 039514 697 TDNFAENNIIGRGGFGSVYGAR-LEDGMKIAIKVFHQQCA-SALKSFEAECEVLKKIRHRNLIKVISSCSNDDFKALVLE 774 (790)
Q Consensus 697 ~~~~~~~~~ig~g~~g~v~~~~-~~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~~~h~nlv~l~~~~~~~~~~~lv~e 774 (790)
..+|+..+.||+|+||.||+|. ..+|+.||||.+..... ...+.+.+|++++++++|||||++++++..++..++|||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 83 (317)
T 2pmi_A 4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFE 83 (317)
T ss_dssp ---------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEEE
T ss_pred ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEEE
Confidence 4678889999999999999998 56789999999975432 223568899999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhc
Q 039514 775 YMSNGSLGDWLHS 787 (790)
Q Consensus 775 ~~~~G~L~~~l~~ 787 (790)
|++ |+|.+++..
T Consensus 84 ~~~-~~L~~~l~~ 95 (317)
T 2pmi_A 84 FMD-NDLKKYMDS 95 (317)
T ss_dssp CCC-CBHHHHHHH
T ss_pred ecC-CCHHHHHHh
Confidence 998 699998864
No 268
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=99.08 E-value=1.8e-10 Score=121.86 Aligned_cols=89 Identities=31% Similarity=0.438 Sum_probs=77.1
Q ss_pred cCccccceeccCCcEEEEEEE-EcCCcEEEEEEecccc---hHHHHHHHHHHHHHhcCCCCceeeEeeEEEeCCeEEEEE
Q 039514 698 DNFAENNIIGRGGFGSVYGAR-LEDGMKIAIKVFHQQC---ASALKSFEAECEVLKKIRHRNLIKVISSCSNDDFKALVL 773 (790)
Q Consensus 698 ~~~~~~~~ig~g~~g~v~~~~-~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~~~h~nlv~l~~~~~~~~~~~lv~ 773 (790)
+.|...+.||+|+||.||+|. ..+++.||||++.... ....+++.+|++++.+++|||||++++++..++..++||
T Consensus 54 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 133 (348)
T 1u5q_A 54 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM 133 (348)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEEE
Confidence 458888999999999999999 5679999999997532 233467899999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhc
Q 039514 774 EYMSNGSLGDWLHS 787 (790)
Q Consensus 774 e~~~~G~L~~~l~~ 787 (790)
||++ |++.+++..
T Consensus 134 e~~~-g~l~~~l~~ 146 (348)
T 1u5q_A 134 EYCL-GSASDLLEV 146 (348)
T ss_dssp ECCS-EEHHHHHHH
T ss_pred ecCC-CCHHHHHHH
Confidence 9998 688888753
No 269
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=99.08 E-value=1.2e-10 Score=130.68 Aligned_cols=90 Identities=30% Similarity=0.511 Sum_probs=79.1
Q ss_pred HhcCccccceeccCCcEEEEEEEEcCCcEEEEEEecccchHHHHHHHHHHHHHhcCCCCceeeEeeEEEeCCeEEEEEec
Q 039514 696 ATDNFAENNIIGRGGFGSVYGARLEDGMKIAIKVFHQQCASALKSFEAECEVLKKIRHRNLIKVISSCSNDDFKALVLEY 775 (790)
Q Consensus 696 ~~~~~~~~~~ig~g~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~~~h~nlv~l~~~~~~~~~~~lv~e~ 775 (790)
..++|...+.||+|+||.||+|....++.||||.++.... ..++|.+|+++|++++|||||++++++.+ +..|+||||
T Consensus 265 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~lv~e~ 342 (535)
T 2h8h_A 265 PRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEY 342 (535)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTSS-CHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECC
T ss_pred chhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCCC-CHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceEeeeh
Confidence 3466888999999999999999988788899999986543 24679999999999999999999999876 678999999
Q ss_pred CCCCCHHHHHhc
Q 039514 776 MSNGSLGDWLHS 787 (790)
Q Consensus 776 ~~~G~L~~~l~~ 787 (790)
|++|+|.++++.
T Consensus 343 ~~~gsL~~~l~~ 354 (535)
T 2h8h_A 343 MSKGSLLDFLKG 354 (535)
T ss_dssp CTTEEHHHHHSH
T ss_pred hcCCcHHHHHhh
Confidence 999999999974
No 270
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=99.07 E-value=2.7e-10 Score=118.04 Aligned_cols=91 Identities=27% Similarity=0.457 Sum_probs=78.3
Q ss_pred hcCccccceeccCCcEEEEEEE-EcCCcEEEEEEecccchHHHHHHHHHHHHHhcCCCCceeeEeeEEEe----------
Q 039514 697 TDNFAENNIIGRGGFGSVYGAR-LEDGMKIAIKVFHQQCASALKSFEAECEVLKKIRHRNLIKVISSCSN---------- 765 (790)
Q Consensus 697 ~~~~~~~~~ig~g~~g~v~~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~~~h~nlv~l~~~~~~---------- 765 (790)
.++|+..+.||+|+||.||+|. ..+++.||||.+... ....+.+.+|+.++.+++||||+++++++.+
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~ 83 (303)
T 1zy4_A 5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT-EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTA 83 (303)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEE-HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC----
T ss_pred cccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEecc-HHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhcc
Confidence 4568899999999999999999 457899999999654 2345678899999999999999999998865
Q ss_pred ---CCeEEEEEecCCCCCHHHHHhcC
Q 039514 766 ---DDFKALVLEYMSNGSLGDWLHSS 788 (790)
Q Consensus 766 ---~~~~~lv~e~~~~G~L~~~l~~~ 788 (790)
.+..++||||+++|+|.++++..
T Consensus 84 ~~~~~~~~lv~e~~~~~~L~~~l~~~ 109 (303)
T 1zy4_A 84 VKKKSTLFIQMEYCENGTLYDLIHSE 109 (303)
T ss_dssp --CEEEEEEEEECCCSCBHHHHHHHS
T ss_pred cccCCceEEEEecCCCCCHHHhhhcc
Confidence 35689999999999999999753
No 271
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=99.07 E-value=3e-10 Score=118.35 Aligned_cols=91 Identities=25% Similarity=0.397 Sum_probs=79.4
Q ss_pred cCccccceeccCCcEEEEEEEE-cCCcEEEEEEecccch--HHHHHHHHHHHHHhcCCCCceeeEeeEEEeCCeEEEEEe
Q 039514 698 DNFAENNIIGRGGFGSVYGARL-EDGMKIAIKVFHQQCA--SALKSFEAECEVLKKIRHRNLIKVISSCSNDDFKALVLE 774 (790)
Q Consensus 698 ~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~~~h~nlv~l~~~~~~~~~~~lv~e 774 (790)
++|...+.||+|+||.||+|.. .+|+.||||.+..... ...+.+.+|++++.+++||||+++++++...+..++|||
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (311)
T 4agu_A 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFE 82 (311)
T ss_dssp CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred ccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEEE
Confidence 5788999999999999999995 5689999999865432 234668899999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhcC
Q 039514 775 YMSNGSLGDWLHSS 788 (790)
Q Consensus 775 ~~~~G~L~~~l~~~ 788 (790)
|+++|+|.++++..
T Consensus 83 ~~~~~~l~~~~~~~ 96 (311)
T 4agu_A 83 YCDHTVLHELDRYQ 96 (311)
T ss_dssp CCSEEHHHHHHHTS
T ss_pred eCCCchHHHHHhhh
Confidence 99999999887653
No 272
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=99.07 E-value=1.4e-10 Score=125.20 Aligned_cols=90 Identities=30% Similarity=0.465 Sum_probs=78.0
Q ss_pred cCccccceeccCCcEEEEEEEE-cCCcEEEEEEecccch-HHHHHHHHHHHHHhcCCCCceeeEeeEEEeCC--eEEEEE
Q 039514 698 DNFAENNIIGRGGFGSVYGARL-EDGMKIAIKVFHQQCA-SALKSFEAECEVLKKIRHRNLIKVISSCSNDD--FKALVL 773 (790)
Q Consensus 698 ~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~~~h~nlv~l~~~~~~~~--~~~lv~ 773 (790)
+.|...+.||+|+||.||+|.. .+|+.||||.+..... ...+.+.+|++++++++|||||++++++...+ ..++||
T Consensus 9 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv~ 88 (396)
T 4eut_A 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIM 88 (396)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEE
T ss_pred CceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEEE
Confidence 5688899999999999999994 5689999999975432 23466789999999999999999999998754 789999
Q ss_pred ecCCCCCHHHHHhc
Q 039514 774 EYMSNGSLGDWLHS 787 (790)
Q Consensus 774 e~~~~G~L~~~l~~ 787 (790)
||+++|+|.++++.
T Consensus 89 e~~~~g~L~~~l~~ 102 (396)
T 4eut_A 89 EFCPCGSLYTVLEE 102 (396)
T ss_dssp CCCTTEEHHHHTTS
T ss_pred ecCCCCCHHHHHHh
Confidence 99999999999875
No 273
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=99.07 E-value=1.8e-10 Score=128.07 Aligned_cols=91 Identities=26% Similarity=0.420 Sum_probs=80.3
Q ss_pred cCccccceeccCCcEEEEEEE-EcCCcEEEEEEecccc---hHHHHHHHHHHHHHhcCCCCceeeEeeEEEeCCeEEEEE
Q 039514 698 DNFAENNIIGRGGFGSVYGAR-LEDGMKIAIKVFHQQC---ASALKSFEAECEVLKKIRHRNLIKVISSCSNDDFKALVL 773 (790)
Q Consensus 698 ~~~~~~~~ig~g~~g~v~~~~-~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~~~h~nlv~l~~~~~~~~~~~lv~ 773 (790)
+.|...+.||+|+||.||+|. ..+|+.||||++.... ....+.+.+|+.++++++|||||++++++.+.+..|+||
T Consensus 26 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 105 (484)
T 3nyv_A 26 DRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVG 105 (484)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred CceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEE
Confidence 568889999999999999999 4578999999996432 233567899999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhcC
Q 039514 774 EYMSNGSLGDWLHSS 788 (790)
Q Consensus 774 e~~~~G~L~~~l~~~ 788 (790)
||+++|+|.+++...
T Consensus 106 e~~~~~~L~~~~~~~ 120 (484)
T 3nyv_A 106 EVYTGGELFDEIISR 120 (484)
T ss_dssp CCCCSCBHHHHHHTC
T ss_pred ecCCCCCHHHHHHhc
Confidence 999999999998764
No 274
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=99.07 E-value=4.9e-10 Score=117.09 Aligned_cols=91 Identities=25% Similarity=0.440 Sum_probs=77.5
Q ss_pred cCccccceeccCCcEEEEEEEE-----cCCcEEEEEEecccc-hHHHHHHHHHHHHHhcCCCCceeeEeeEEEe--CCeE
Q 039514 698 DNFAENNIIGRGGFGSVYGARL-----EDGMKIAIKVFHQQC-ASALKSFEAECEVLKKIRHRNLIKVISSCSN--DDFK 769 (790)
Q Consensus 698 ~~~~~~~~ig~g~~g~v~~~~~-----~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~~~h~nlv~l~~~~~~--~~~~ 769 (790)
+.|...+.||+|+||.||++.+ .+++.||||++.... ....+.+.+|++++++++||||+++++++.+ ....
T Consensus 31 r~~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 110 (318)
T 3lxp_A 31 RYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASL 110 (318)
T ss_dssp GGEEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEE
T ss_pred HHHhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceE
Confidence 3358889999999999998864 367899999997653 3445678999999999999999999999987 4678
Q ss_pred EEEEecCCCCCHHHHHhcC
Q 039514 770 ALVLEYMSNGSLGDWLHSS 788 (790)
Q Consensus 770 ~lv~e~~~~G~L~~~l~~~ 788 (790)
++||||+++|+|.+++...
T Consensus 111 ~lv~e~~~~~~L~~~l~~~ 129 (318)
T 3lxp_A 111 QLVMEYVPLGSLRDYLPRH 129 (318)
T ss_dssp EEEECCCTTCBHHHHGGGS
T ss_pred EEEEecccCCcHHHHHhhC
Confidence 9999999999999998764
No 275
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=99.07 E-value=2.5e-10 Score=117.14 Aligned_cols=92 Identities=26% Similarity=0.442 Sum_probs=79.7
Q ss_pred hcCccccceeccCCcEEEEEEEE-cCCcEEEEEEecccch---HHHHHHHHHHHHHhcCCCCceeeEeeEEEeCCeEEEE
Q 039514 697 TDNFAENNIIGRGGFGSVYGARL-EDGMKIAIKVFHQQCA---SALKSFEAECEVLKKIRHRNLIKVISSCSNDDFKALV 772 (790)
Q Consensus 697 ~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~~~h~nlv~l~~~~~~~~~~~lv 772 (790)
.++|...+.||+|+||.||+|.. .+++.||||.+..... ...+.+.+|++++.+++||||+++++++.+++..++|
T Consensus 13 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 92 (284)
T 2vgo_A 13 IDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLM 92 (284)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEE
Confidence 36788999999999999999994 5688999999975432 1245688999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHhcC
Q 039514 773 LEYMSNGSLGDWLHSS 788 (790)
Q Consensus 773 ~e~~~~G~L~~~l~~~ 788 (790)
|||+++|+|.+++...
T Consensus 93 ~e~~~~~~L~~~l~~~ 108 (284)
T 2vgo_A 93 LEFAPRGELYKELQKH 108 (284)
T ss_dssp ECCCTTEEHHHHHHHH
T ss_pred EEeCCCCcHHHHHHhc
Confidence 9999999999998753
No 276
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=99.06 E-value=1.1e-10 Score=122.46 Aligned_cols=96 Identities=23% Similarity=0.428 Sum_probs=82.1
Q ss_pred HHHHHhcCccccceeccCCcEEEEEEEEc------CCcEEEEEEecccc-hHHHHHHHHHHHHHhcCCCCceeeEeeEEE
Q 039514 692 ELLQATDNFAENNIIGRGGFGSVYGARLE------DGMKIAIKVFHQQC-ASALKSFEAECEVLKKIRHRNLIKVISSCS 764 (790)
Q Consensus 692 ~~~~~~~~~~~~~~ig~g~~g~v~~~~~~------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~~~h~nlv~l~~~~~ 764 (790)
+.....++|...+.||+|+||.||+|... +++.||||.+.... ......+.+|+.++++++||||+++++++.
T Consensus 19 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~ 98 (322)
T 1p4o_A 19 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVS 98 (322)
T ss_dssp TTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEEC
T ss_pred hhcchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEEEc
Confidence 33345678999999999999999999843 46789999997543 334567899999999999999999999999
Q ss_pred eCCeEEEEEecCCCCCHHHHHhc
Q 039514 765 NDDFKALVLEYMSNGSLGDWLHS 787 (790)
Q Consensus 765 ~~~~~~lv~e~~~~G~L~~~l~~ 787 (790)
.++..++||||+++|+|.++++.
T Consensus 99 ~~~~~~lv~e~~~~~~L~~~l~~ 121 (322)
T 1p4o_A 99 QGQPTLVIMELMTRGDLKSYLRS 121 (322)
T ss_dssp SSSSCEEEEECCTTCBHHHHHHH
T ss_pred cCCccEEEEEeCCCCcHHHHHHH
Confidence 99999999999999999999875
No 277
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=99.06 E-value=2.8e-10 Score=118.02 Aligned_cols=90 Identities=26% Similarity=0.521 Sum_probs=75.1
Q ss_pred cCccccceeccCCcEEEEEEEE-----cCCcEEEEEEecccch-HHHHHHHHHHHHHhcCCCCceeeEeeEEEeC--CeE
Q 039514 698 DNFAENNIIGRGGFGSVYGARL-----EDGMKIAIKVFHQQCA-SALKSFEAECEVLKKIRHRNLIKVISSCSND--DFK 769 (790)
Q Consensus 698 ~~~~~~~~ig~g~~g~v~~~~~-----~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~~~h~nlv~l~~~~~~~--~~~ 769 (790)
+.|+..+.||+|+||.||+|++ .+++.||||.+..... ...+.+.+|+.++.+++||||+++++++... ...
T Consensus 21 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 100 (302)
T 4e5w_A 21 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGI 100 (302)
T ss_dssp GGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CCE
T ss_pred hhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCceE
Confidence 5588899999999999999984 4688999999975432 2346788999999999999999999999876 668
Q ss_pred EEEEecCCCCCHHHHHhc
Q 039514 770 ALVLEYMSNGSLGDWLHS 787 (790)
Q Consensus 770 ~lv~e~~~~G~L~~~l~~ 787 (790)
++||||+++|+|.++++.
T Consensus 101 ~lv~e~~~~~~L~~~l~~ 118 (302)
T 4e5w_A 101 KLIMEFLPSGSLKEYLPK 118 (302)
T ss_dssp EEEEECCTTCBHHHHHHH
T ss_pred EEEEEeCCCCcHHHHHHh
Confidence 999999999999999854
No 278
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=99.06 E-value=1.5e-10 Score=119.18 Aligned_cols=91 Identities=24% Similarity=0.541 Sum_probs=81.0
Q ss_pred HhcCccccceeccCCcEEEEEEEE-cCCcEEEEEEecccchHHHHHHHHHHHHHhcCCCCceeeEeeEEEeCCeEEEEEe
Q 039514 696 ATDNFAENNIIGRGGFGSVYGARL-EDGMKIAIKVFHQQCASALKSFEAECEVLKKIRHRNLIKVISSCSNDDFKALVLE 774 (790)
Q Consensus 696 ~~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~~~h~nlv~l~~~~~~~~~~~lv~e 774 (790)
...+|...+.||+|+||.||+|.. .+++.||+|.+..... ..+.+.+|+.++++++||||+++++++.+++..++|||
T Consensus 11 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e 89 (288)
T 3kfa_A 11 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM-EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITE 89 (288)
T ss_dssp CGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCST-HHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEE
T ss_pred cccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCHH-HHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEEEE
Confidence 456788899999999999999995 4588999999976533 35678899999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhc
Q 039514 775 YMSNGSLGDWLHS 787 (790)
Q Consensus 775 ~~~~G~L~~~l~~ 787 (790)
|+++|+|.++++.
T Consensus 90 ~~~~~~L~~~~~~ 102 (288)
T 3kfa_A 90 FMTYGNLLDYLRE 102 (288)
T ss_dssp CCTTEEHHHHHHH
T ss_pred cCCCCcHHHHHHh
Confidence 9999999999975
No 279
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=99.06 E-value=2.1e-10 Score=121.46 Aligned_cols=93 Identities=23% Similarity=0.517 Sum_probs=78.5
Q ss_pred HhcCccccceeccCCcEEEEEEEE------cCCcEEEEEEecccc-hHHHHHHHHHHHHHhcC-CCCceeeEeeEEEeCC
Q 039514 696 ATDNFAENNIIGRGGFGSVYGARL------EDGMKIAIKVFHQQC-ASALKSFEAECEVLKKI-RHRNLIKVISSCSNDD 767 (790)
Q Consensus 696 ~~~~~~~~~~ig~g~~g~v~~~~~------~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~~-~h~nlv~l~~~~~~~~ 767 (790)
..++|...+.||+|+||.||+|.. .+++.||||.+.... ....+.+.+|+.++.++ +||||+++++++...+
T Consensus 43 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~ 122 (344)
T 1rjb_A 43 PRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSG 122 (344)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred CHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeCC
Confidence 457788999999999999999984 245689999997543 22346789999999999 8999999999999999
Q ss_pred eEEEEEecCCCCCHHHHHhcC
Q 039514 768 FKALVLEYMSNGSLGDWLHSS 788 (790)
Q Consensus 768 ~~~lv~e~~~~G~L~~~l~~~ 788 (790)
..++||||+++|+|.+++...
T Consensus 123 ~~~lv~e~~~~g~L~~~l~~~ 143 (344)
T 1rjb_A 123 PIYLIFEYCCYGDLLNYLRSK 143 (344)
T ss_dssp SCEEEEECCTTCBHHHHHHTT
T ss_pred ccEEEEecCCCCcHHHHHhhc
Confidence 999999999999999999764
No 280
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=99.06 E-value=3.1e-10 Score=117.72 Aligned_cols=91 Identities=24% Similarity=0.372 Sum_probs=80.4
Q ss_pred hcCccccceeccCCcEEEEEEE-EcCCcEEEEEEecccc-hHHHHHHHHHHHHHhcCCCCceeeEeeEEEeCCeEEEEEe
Q 039514 697 TDNFAENNIIGRGGFGSVYGAR-LEDGMKIAIKVFHQQC-ASALKSFEAECEVLKKIRHRNLIKVISSCSNDDFKALVLE 774 (790)
Q Consensus 697 ~~~~~~~~~ig~g~~g~v~~~~-~~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~~~h~nlv~l~~~~~~~~~~~lv~e 774 (790)
.+.|...+.||+|+||.||+|. ..+++.||||.+.... ....+.+.+|+.++.+++||||+++++++..++..++|||
T Consensus 21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 100 (303)
T 3a7i_A 21 EELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIME 100 (303)
T ss_dssp GGTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred HHHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEE
Confidence 4668899999999999999998 4678999999997543 2345678999999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhc
Q 039514 775 YMSNGSLGDWLHS 787 (790)
Q Consensus 775 ~~~~G~L~~~l~~ 787 (790)
|+++|+|.+++..
T Consensus 101 ~~~~~~L~~~~~~ 113 (303)
T 3a7i_A 101 YLGGGSALDLLEP 113 (303)
T ss_dssp CCTTEEHHHHHTT
T ss_pred eCCCCcHHHHHhc
Confidence 9999999999864
No 281
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=99.05 E-value=1.2e-10 Score=120.61 Aligned_cols=89 Identities=24% Similarity=0.403 Sum_probs=72.2
Q ss_pred hcCccccceeccCCcEEEEEEE-EcCCcEEEEEEecccchH--------------------------HHHHHHHHHHHHh
Q 039514 697 TDNFAENNIIGRGGFGSVYGAR-LEDGMKIAIKVFHQQCAS--------------------------ALKSFEAECEVLK 749 (790)
Q Consensus 697 ~~~~~~~~~ig~g~~g~v~~~~-~~~~~~vavK~~~~~~~~--------------------------~~~~~~~e~~~l~ 749 (790)
.++|...+.||+|+||.||+|. ..+++.||||.+...... ..+.+.+|+++++
T Consensus 12 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~ 91 (298)
T 2zv2_A 12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILK 91 (298)
T ss_dssp ETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHH
T ss_pred ecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHH
Confidence 4678999999999999999998 467899999999654211 1245889999999
Q ss_pred cCCCCceeeEeeEEEe--CCeEEEEEecCCCCCHHHHH
Q 039514 750 KIRHRNLIKVISSCSN--DDFKALVLEYMSNGSLGDWL 785 (790)
Q Consensus 750 ~~~h~nlv~l~~~~~~--~~~~~lv~e~~~~G~L~~~l 785 (790)
+++||||+++++++.. .+..++||||+++|+|.+++
T Consensus 92 ~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~ 129 (298)
T 2zv2_A 92 KLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVP 129 (298)
T ss_dssp TCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSS
T ss_pred hCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHh
Confidence 9999999999999986 56899999999999987654
No 282
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=99.05 E-value=1.7e-10 Score=128.15 Aligned_cols=91 Identities=23% Similarity=0.357 Sum_probs=79.9
Q ss_pred hcCccccceeccCCcEEEEEEE-EcCCcEEEEEEecccc--hHHHHHHHHHHHHHhcCCCCceeeEeeEEEeCCeEEEEE
Q 039514 697 TDNFAENNIIGRGGFGSVYGAR-LEDGMKIAIKVFHQQC--ASALKSFEAECEVLKKIRHRNLIKVISSCSNDDFKALVL 773 (790)
Q Consensus 697 ~~~~~~~~~ig~g~~g~v~~~~-~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~~~h~nlv~l~~~~~~~~~~~lv~ 773 (790)
.++|...+.||+|+||.||+|. ..+++.||||++.... ......+.+|+.++++++|||||++++++...+..|+||
T Consensus 21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 100 (486)
T 3mwu_A 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVG 100 (486)
T ss_dssp HHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEEE
Confidence 3568899999999999999999 4578999999996532 223567889999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhc
Q 039514 774 EYMSNGSLGDWLHS 787 (790)
Q Consensus 774 e~~~~G~L~~~l~~ 787 (790)
||+++|+|.+++..
T Consensus 101 e~~~~~~L~~~~~~ 114 (486)
T 3mwu_A 101 ELYTGGELFDEIIK 114 (486)
T ss_dssp CCCCSCBHHHHHHH
T ss_pred EcCCCCcHHHHHHh
Confidence 99999999998865
No 283
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=99.05 E-value=2.6e-10 Score=116.69 Aligned_cols=91 Identities=19% Similarity=0.385 Sum_probs=78.6
Q ss_pred hcCccccceeccCCcEEEEEEEE-cCCcEEEEEEecccc--hHHHHHHHHHHHHHhcCCCCceeeEeeEEEe--CCeEEE
Q 039514 697 TDNFAENNIIGRGGFGSVYGARL-EDGMKIAIKVFHQQC--ASALKSFEAECEVLKKIRHRNLIKVISSCSN--DDFKAL 771 (790)
Q Consensus 697 ~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~~~h~nlv~l~~~~~~--~~~~~l 771 (790)
.++|+..+.||+|+||.||++.. .+++.||+|.+.... ....+.+.+|+.++++++||||+++++++.. ++..++
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 84 (279)
T 2w5a_A 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYI 84 (279)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEE
T ss_pred hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEE
Confidence 36788999999999999999994 578999999997543 3345678999999999999999999998854 578999
Q ss_pred EEecCCCCCHHHHHhc
Q 039514 772 VLEYMSNGSLGDWLHS 787 (790)
Q Consensus 772 v~e~~~~G~L~~~l~~ 787 (790)
||||+++|+|.+++..
T Consensus 85 v~e~~~~~~L~~~l~~ 100 (279)
T 2w5a_A 85 VMEYCEGGDLASVITK 100 (279)
T ss_dssp EEECCTTEEHHHHHHH
T ss_pred EEeCCCCCCHHHHHHh
Confidence 9999999999999864
No 284
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=99.05 E-value=2.1e-10 Score=120.42 Aligned_cols=93 Identities=24% Similarity=0.407 Sum_probs=77.9
Q ss_pred HHhcCccccceeccCCcEEEEEEE-EcCCcEEEEEEecccchH--HHHHHHHHHHHHhcCCCCceeeEeeEEEeCCeEEE
Q 039514 695 QATDNFAENNIIGRGGFGSVYGAR-LEDGMKIAIKVFHQQCAS--ALKSFEAECEVLKKIRHRNLIKVISSCSNDDFKAL 771 (790)
Q Consensus 695 ~~~~~~~~~~~ig~g~~g~v~~~~-~~~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~~~h~nlv~l~~~~~~~~~~~l 771 (790)
...++|...+.||+|+||.||+|. ..+++.||||++...... ..+.+.+|+.++++++||||+++++++..++..++
T Consensus 31 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 110 (329)
T 3gbz_A 31 TSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHL 110 (329)
T ss_dssp -CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEEE
T ss_pred cchhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEEE
Confidence 355789999999999999999998 567899999999754332 23567899999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHhcC
Q 039514 772 VLEYMSNGSLGDWLHSS 788 (790)
Q Consensus 772 v~e~~~~G~L~~~l~~~ 788 (790)
||||++ |+|.+++...
T Consensus 111 v~e~~~-~~L~~~~~~~ 126 (329)
T 3gbz_A 111 IFEYAE-NDLKKYMDKN 126 (329)
T ss_dssp EEECCS-EEHHHHHHHC
T ss_pred EEecCC-CCHHHHHhhc
Confidence 999998 5999998764
No 285
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=99.05 E-value=2.1e-10 Score=120.37 Aligned_cols=92 Identities=22% Similarity=0.435 Sum_probs=77.5
Q ss_pred hcCccccceeccCCcEEEEEEEE------cCCcEEEEEEeccc-chHHHHHHHHHHHHHhcCCCCceeeEeeEEEeCCeE
Q 039514 697 TDNFAENNIIGRGGFGSVYGARL------EDGMKIAIKVFHQQ-CASALKSFEAECEVLKKIRHRNLIKVISSCSNDDFK 769 (790)
Q Consensus 697 ~~~~~~~~~ig~g~~g~v~~~~~------~~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~~~h~nlv~l~~~~~~~~~~ 769 (790)
.++|...+.||+|+||.||+|.. .+++.||||.+... ......++.+|+.++.+++||||+++++++...+..
T Consensus 29 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 108 (327)
T 2yfx_A 29 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPR 108 (327)
T ss_dssp GGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred hhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCCc
Confidence 46789999999999999999983 35678999999754 334456789999999999999999999999999999
Q ss_pred EEEEecCCCCCHHHHHhcC
Q 039514 770 ALVLEYMSNGSLGDWLHSS 788 (790)
Q Consensus 770 ~lv~e~~~~G~L~~~l~~~ 788 (790)
++||||+++|+|.++++..
T Consensus 109 ~lv~e~~~~~~L~~~l~~~ 127 (327)
T 2yfx_A 109 FILMELMAGGDLKSFLRET 127 (327)
T ss_dssp EEEEECCTTEEHHHHHHHT
T ss_pred EEEEecCCCCcHHHHHHhh
Confidence 9999999999999999864
No 286
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=99.05 E-value=2.2e-10 Score=119.07 Aligned_cols=86 Identities=31% Similarity=0.569 Sum_probs=75.0
Q ss_pred cCccccceeccCCcEEEEEEEEcCCcEEEEEEecccchHHHHHHHHHHHHHhcCCCCceeeEeeEEEeCCeEEEEEecCC
Q 039514 698 DNFAENNIIGRGGFGSVYGARLEDGMKIAIKVFHQQCASALKSFEAECEVLKKIRHRNLIKVISSCSNDDFKALVLEYMS 777 (790)
Q Consensus 698 ~~~~~~~~ig~g~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~~~h~nlv~l~~~~~~~~~~~lv~e~~~ 777 (790)
++|+..+.||+|+||.||+|... ++.||||.+.... ..+.+.+|++++++++||||+++++++. +..++||||++
T Consensus 8 ~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~--~~~~~~~E~~~l~~l~hp~iv~~~~~~~--~~~~lv~e~~~ 82 (307)
T 2eva_A 8 KEIEVEEVVGRGAFGVVCKAKWR-AKDVAIKQIESES--ERKAFIVELRQLSRVNHPNIVKLYGACL--NPVCLVMEYAE 82 (307)
T ss_dssp GGEEEEEEEECCSSSEEEEEEET-TEEEEEEECSSTT--HHHHHHHHHHHHHHCCCTTBCCEEEBCT--TTTEEEEECCT
T ss_pred hHeeeeeEeecCCCceEEEEEEC-CeeEEEEEecChh--HHHHHHHHHHHHhcCCCCCcCeEEEEEc--CCcEEEEEcCC
Confidence 56888899999999999999874 7889999997542 3467899999999999999999999887 34789999999
Q ss_pred CCCHHHHHhcC
Q 039514 778 NGSLGDWLHSS 788 (790)
Q Consensus 778 ~G~L~~~l~~~ 788 (790)
+|+|.++++..
T Consensus 83 ~~~L~~~l~~~ 93 (307)
T 2eva_A 83 GGSLYNVLHGA 93 (307)
T ss_dssp TCBHHHHHHCS
T ss_pred CCCHHHHHhcc
Confidence 99999999864
No 287
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=99.05 E-value=4.8e-10 Score=115.46 Aligned_cols=89 Identities=28% Similarity=0.442 Sum_probs=76.2
Q ss_pred CccccceeccCCcEEEEEEE-EcCCcEEEEEEecccc--hHHHHHHHHHHHHHhcCCCCceeeEeeEEEe----CCeEEE
Q 039514 699 NFAENNIIGRGGFGSVYGAR-LEDGMKIAIKVFHQQC--ASALKSFEAECEVLKKIRHRNLIKVISSCSN----DDFKAL 771 (790)
Q Consensus 699 ~~~~~~~ig~g~~g~v~~~~-~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~~~h~nlv~l~~~~~~----~~~~~l 771 (790)
.|...+.||+|+||.||+|. ..+++.||+|.+.... ....+.+.+|+.++++++||||+++++++.. ....++
T Consensus 27 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~l 106 (290)
T 1t4h_A 27 FLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVL 106 (290)
T ss_dssp EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEE
T ss_pred eEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEEE
Confidence 46777899999999999998 4568899999997543 3445678999999999999999999999865 456899
Q ss_pred EEecCCCCCHHHHHhc
Q 039514 772 VLEYMSNGSLGDWLHS 787 (790)
Q Consensus 772 v~e~~~~G~L~~~l~~ 787 (790)
||||+++|+|.++++.
T Consensus 107 v~e~~~~~~L~~~l~~ 122 (290)
T 1t4h_A 107 VTELMTSGTLKTYLKR 122 (290)
T ss_dssp EEECCCSCBHHHHHHH
T ss_pred EEEecCCCCHHHHHHH
Confidence 9999999999999875
No 288
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=99.05 E-value=3.5e-10 Score=116.31 Aligned_cols=89 Identities=24% Similarity=0.373 Sum_probs=78.0
Q ss_pred cCccccceeccCCcEEEEEEEEcCCcEEEEEEecccchH--HHHHHHHHHHHHhcCCCCceeeEeeEEEeCCeEEEEEec
Q 039514 698 DNFAENNIIGRGGFGSVYGARLEDGMKIAIKVFHQQCAS--ALKSFEAECEVLKKIRHRNLIKVISSCSNDDFKALVLEY 775 (790)
Q Consensus 698 ~~~~~~~~ig~g~~g~v~~~~~~~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~~~h~nlv~l~~~~~~~~~~~lv~e~ 775 (790)
++|...+.||+|+||.||+|...+|+.||||.+...... ..+.+.+|+.++++++||||+++++++...+..++||||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (288)
T 1ob3_A 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH 81 (288)
T ss_dssp CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred ccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEe
Confidence 468889999999999999999878999999999654322 235688999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhc
Q 039514 776 MSNGSLGDWLHS 787 (790)
Q Consensus 776 ~~~G~L~~~l~~ 787 (790)
+++ +|.+++..
T Consensus 82 ~~~-~l~~~~~~ 92 (288)
T 1ob3_A 82 LDQ-DLKKLLDV 92 (288)
T ss_dssp CSE-EHHHHHHT
T ss_pred cCC-CHHHHHHh
Confidence 985 89998875
No 289
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=99.04 E-value=2e-10 Score=117.31 Aligned_cols=91 Identities=22% Similarity=0.350 Sum_probs=80.1
Q ss_pred hcCccccceeccCCcEEEEEEEE-cCCcEEEEEEecccc-hHHHHHHHHHHHHHhcCCCCceeeEeeEEEeCCeEEEEEe
Q 039514 697 TDNFAENNIIGRGGFGSVYGARL-EDGMKIAIKVFHQQC-ASALKSFEAECEVLKKIRHRNLIKVISSCSNDDFKALVLE 774 (790)
Q Consensus 697 ~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~~~h~nlv~l~~~~~~~~~~~lv~e 774 (790)
.++|+..+.||+|+||.||+|.. .+++.||||.+.... ....+.+.+|+.+++.++||||+++++++..++..++|||
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 85 (276)
T 2yex_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE 85 (276)
T ss_dssp HHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred ecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEEE
Confidence 46788999999999999999994 578999999997543 2345678899999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhc
Q 039514 775 YMSNGSLGDWLHS 787 (790)
Q Consensus 775 ~~~~G~L~~~l~~ 787 (790)
|+++|+|.+++..
T Consensus 86 ~~~~~~L~~~l~~ 98 (276)
T 2yex_A 86 YCSGGELFDRIEP 98 (276)
T ss_dssp CCTTEEGGGGSBT
T ss_pred ecCCCcHHHHHhh
Confidence 9999999998764
No 290
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=99.04 E-value=4.5e-10 Score=119.70 Aligned_cols=94 Identities=23% Similarity=0.416 Sum_probs=80.7
Q ss_pred HHHhcCccccceeccCCcEEEEEEEE-cCCcEEEEEEecccch--------HHHHHHHHHHHHHhcC-CCCceeeEeeEE
Q 039514 694 LQATDNFAENNIIGRGGFGSVYGARL-EDGMKIAIKVFHQQCA--------SALKSFEAECEVLKKI-RHRNLIKVISSC 763 (790)
Q Consensus 694 ~~~~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~~--------~~~~~~~~e~~~l~~~-~h~nlv~l~~~~ 763 (790)
....++|...+.||+|+||.||+|.. .+|+.||||.+..... ...+.+.+|+.++.++ +||||+++++++
T Consensus 90 ~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~ 169 (365)
T 2y7j_A 90 KEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSY 169 (365)
T ss_dssp HHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEE
T ss_pred hhhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEE
Confidence 34556799999999999999999996 4799999999865321 1235678999999999 799999999999
Q ss_pred EeCCeEEEEEecCCCCCHHHHHhc
Q 039514 764 SNDDFKALVLEYMSNGSLGDWLHS 787 (790)
Q Consensus 764 ~~~~~~~lv~e~~~~G~L~~~l~~ 787 (790)
......++||||+++|+|.+++..
T Consensus 170 ~~~~~~~lv~e~~~g~~L~~~l~~ 193 (365)
T 2y7j_A 170 ESSSFMFLVFDLMRKGELFDYLTE 193 (365)
T ss_dssp EBSSEEEEEECCCTTCBHHHHHHH
T ss_pred eeCCEEEEEEEeCCCCcHHHHHHh
Confidence 999999999999999999999864
No 291
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=99.04 E-value=1.6e-10 Score=125.55 Aligned_cols=92 Identities=27% Similarity=0.351 Sum_probs=76.5
Q ss_pred HhcCccccceeccCCcEEEEEEE-EcCCcEEEEEEecccch--------HHHHHHHHHHHHHhcCCCCceeeEeeEEEeC
Q 039514 696 ATDNFAENNIIGRGGFGSVYGAR-LEDGMKIAIKVFHQQCA--------SALKSFEAECEVLKKIRHRNLIKVISSCSND 766 (790)
Q Consensus 696 ~~~~~~~~~~ig~g~~g~v~~~~-~~~~~~vavK~~~~~~~--------~~~~~~~~e~~~l~~~~h~nlv~l~~~~~~~ 766 (790)
..++|...+.||+|+||.||+|. ..+++.||||.+..... .....+.+|+.++++++|||||++++++. .
T Consensus 133 ~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~-~ 211 (419)
T 3i6u_A 133 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFD-A 211 (419)
T ss_dssp HHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEE-S
T ss_pred hhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEe-c
Confidence 45789999999999999999998 56789999999975421 11224789999999999999999999985 4
Q ss_pred CeEEEEEecCCCCCHHHHHhcC
Q 039514 767 DFKALVLEYMSNGSLGDWLHSS 788 (790)
Q Consensus 767 ~~~~lv~e~~~~G~L~~~l~~~ 788 (790)
+..++|||||++|+|.+++...
T Consensus 212 ~~~~lv~e~~~~g~L~~~l~~~ 233 (419)
T 3i6u_A 212 EDYYIVLELMEGGELFDKVVGN 233 (419)
T ss_dssp SEEEEEEECCTTCBGGGGTSSS
T ss_pred CceEEEEEcCCCCcHHHHHhcc
Confidence 5689999999999999987654
No 292
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=99.04 E-value=4e-10 Score=118.30 Aligned_cols=91 Identities=34% Similarity=0.660 Sum_probs=77.0
Q ss_pred cCccccceeccCCcEEEEEEE-EcCCcEE--EEEEecccc-hHHHHHHHHHHHHHhcC-CCCceeeEeeEEEeCCeEEEE
Q 039514 698 DNFAENNIIGRGGFGSVYGAR-LEDGMKI--AIKVFHQQC-ASALKSFEAECEVLKKI-RHRNLIKVISSCSNDDFKALV 772 (790)
Q Consensus 698 ~~~~~~~~ig~g~~g~v~~~~-~~~~~~v--avK~~~~~~-~~~~~~~~~e~~~l~~~-~h~nlv~l~~~~~~~~~~~lv 772 (790)
++|...+.||+|+||.||+|. ..+++.+ |||.+.... ....+.+.+|++++.++ +||||+++++++..++..++|
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 104 (327)
T 1fvr_A 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA 104 (327)
T ss_dssp GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEE
T ss_pred HHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEEE
Confidence 678889999999999999999 5567654 999987532 23345688999999999 899999999999999999999
Q ss_pred EecCCCCCHHHHHhcC
Q 039514 773 LEYMSNGSLGDWLHSS 788 (790)
Q Consensus 773 ~e~~~~G~L~~~l~~~ 788 (790)
|||+++|+|.++++..
T Consensus 105 ~e~~~~~~L~~~l~~~ 120 (327)
T 1fvr_A 105 IEYAPHGNLLDFLRKS 120 (327)
T ss_dssp ECCCTTCBHHHHHHTT
T ss_pred EecCCCCCHHHHHHhc
Confidence 9999999999999764
No 293
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=99.03 E-value=4.2e-10 Score=118.33 Aligned_cols=91 Identities=26% Similarity=0.482 Sum_probs=77.1
Q ss_pred cCccccceeccCCcEEEEEEEEc-C----CcEEEEEEecccc-hHHHHHHHHHHHHHhcCCCCceeeEeeEEEeCCeEEE
Q 039514 698 DNFAENNIIGRGGFGSVYGARLE-D----GMKIAIKVFHQQC-ASALKSFEAECEVLKKIRHRNLIKVISSCSNDDFKAL 771 (790)
Q Consensus 698 ~~~~~~~~ig~g~~g~v~~~~~~-~----~~~vavK~~~~~~-~~~~~~~~~e~~~l~~~~h~nlv~l~~~~~~~~~~~l 771 (790)
..|...+.||+|+||.||+|... + +..||||.+.... ......+.+|+.++.+++||||+++++++...+..++
T Consensus 44 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 123 (333)
T 1mqb_A 44 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMI 123 (333)
T ss_dssp TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcEE
Confidence 45666899999999999999843 2 2469999997643 3345678999999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHhcC
Q 039514 772 VLEYMSNGSLGDWLHSS 788 (790)
Q Consensus 772 v~e~~~~G~L~~~l~~~ 788 (790)
||||+++|+|.++++..
T Consensus 124 v~e~~~~~~L~~~l~~~ 140 (333)
T 1mqb_A 124 ITEYMENGALDKFLREK 140 (333)
T ss_dssp EEECCTTEEHHHHHHHT
T ss_pred EEeCCCCCcHHHHHHhC
Confidence 99999999999999754
No 294
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=99.03 E-value=3.6e-10 Score=115.63 Aligned_cols=89 Identities=27% Similarity=0.508 Sum_probs=77.6
Q ss_pred hcCccccceeccCCcEEEEEEEEcCCcEEEEEEecccchHHHHHHHHHHHHHhcCCCCceeeEeeEEEeCCeEEEEEecC
Q 039514 697 TDNFAENNIIGRGGFGSVYGARLEDGMKIAIKVFHQQCASALKSFEAECEVLKKIRHRNLIKVISSCSNDDFKALVLEYM 776 (790)
Q Consensus 697 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~~~h~nlv~l~~~~~~~~~~~lv~e~~ 776 (790)
.++|...+.||+|+||.||+|...+++.||||.+..... ..+.+.+|++++.+++||||+++++++. ++..++||||+
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~ 89 (279)
T 1qpc_A 12 RETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSM-SPDAFLAEANLMKQLQHQRLVRLYAVVT-QEPIYIITEYM 89 (279)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTSS-CHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEEEECC
T ss_pred HHhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCcc-cHHHHHHHHHHHHhCCCcCcceEEEEEc-CCCcEEEEecC
Confidence 467888999999999999999988888999999976432 3467889999999999999999999986 45689999999
Q ss_pred CCCCHHHHHhc
Q 039514 777 SNGSLGDWLHS 787 (790)
Q Consensus 777 ~~G~L~~~l~~ 787 (790)
++|+|.+++..
T Consensus 90 ~~~~L~~~l~~ 100 (279)
T 1qpc_A 90 ENGSLVDFLKT 100 (279)
T ss_dssp TTCBHHHHTTS
T ss_pred CCCCHHHHHhc
Confidence 99999999864
No 295
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=99.03 E-value=3.2e-10 Score=120.79 Aligned_cols=102 Identities=24% Similarity=0.322 Sum_probs=84.6
Q ss_pred ccccCHHHHHHHhcCccccceeccCCcEEEEEEEE-cCCcEEEEEEecccchHHHHHHHHHHHHHhcCC-----CCceee
Q 039514 685 LRRFSYLELLQATDNFAENNIIGRGGFGSVYGARL-EDGMKIAIKVFHQQCASALKSFEAECEVLKKIR-----HRNLIK 758 (790)
Q Consensus 685 ~~~~~~~~~~~~~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~~~-----h~nlv~ 758 (790)
...+++.+.....++|...+.||+|+||.||+|.. .+++.||||.+.... ...+.+..|+.++.+++ |||||+
T Consensus 22 ~~~~~~~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~h~~iv~ 100 (360)
T 3llt_A 22 IVHFSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIK-KYTRSAKIEADILKKIQNDDINNNNIVK 100 (360)
T ss_dssp GGSCCCCTTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCH-HHHHHHHHHHHHHHHTCCCSTTGGGBCC
T ss_pred ceeeeeecceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccch-hhhhhhHHHHHHHHHhcccCCCCCCeec
Confidence 33445554445668899999999999999999994 678999999997532 23456778999998886 999999
Q ss_pred EeeEEEeCCeEEEEEecCCCCCHHHHHhcC
Q 039514 759 VISSCSNDDFKALVLEYMSNGSLGDWLHSS 788 (790)
Q Consensus 759 l~~~~~~~~~~~lv~e~~~~G~L~~~l~~~ 788 (790)
+++++...+..++||||+ +|+|.+++...
T Consensus 101 ~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~ 129 (360)
T 3llt_A 101 YHGKFMYYDHMCLIFEPL-GPSLYEIITRN 129 (360)
T ss_dssp EEEEEEETTEEEEEECCC-CCBHHHHHHHT
T ss_pred ccceeeECCeeEEEEcCC-CCCHHHHHHhc
Confidence 999999999999999999 89999998764
No 296
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=99.03 E-value=4.4e-10 Score=116.51 Aligned_cols=87 Identities=30% Similarity=0.539 Sum_probs=72.2
Q ss_pred cCccccceeccCCcEEEEEEEEcCCcEEEEEEecccchHHHHHHHHHHHHHhc--CCCCceeeEeeEEEeCC----eEEE
Q 039514 698 DNFAENNIIGRGGFGSVYGARLEDGMKIAIKVFHQQCASALKSFEAECEVLKK--IRHRNLIKVISSCSNDD----FKAL 771 (790)
Q Consensus 698 ~~~~~~~~ig~g~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~--~~h~nlv~l~~~~~~~~----~~~l 771 (790)
++|...+.||+|+||.||+|.. +++.||||.+.... ...+.+|.+++.. ++||||+++++++.... ..++
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~---~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~l 78 (303)
T 3gxj_A 3 RTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSRE---ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWL 78 (303)
T ss_dssp GGCCCCEEEEECSSSEEEEC-C-TTSCEEEEECC-TT---HHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSEEEEE
T ss_pred ceeeehhhccCCCCeEEEEEEE-cCcceEEEEecccc---hhhHHHHHHHHHHHhccCcceeeeeeecccCCCccceeEE
Confidence 5688899999999999999976 48899999997543 3456778888877 78999999999998866 7899
Q ss_pred EEecCCCCCHHHHHhcC
Q 039514 772 VLEYMSNGSLGDWLHSS 788 (790)
Q Consensus 772 v~e~~~~G~L~~~l~~~ 788 (790)
||||+++|+|.++++..
T Consensus 79 v~e~~~~g~L~~~l~~~ 95 (303)
T 3gxj_A 79 VSDYHEHGSLFDYLNRY 95 (303)
T ss_dssp EEECCTTCCHHHHHHHC
T ss_pred EEeccCCCCHHHHHhcc
Confidence 99999999999998753
No 297
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=99.02 E-value=7.6e-10 Score=113.76 Aligned_cols=90 Identities=24% Similarity=0.469 Sum_probs=74.9
Q ss_pred cCccccc-eeccCCcEEEEEEEE---cCCcEEEEEEecccc-hHHHHHHHHHHHHHhcCCCCceeeEeeEEEeCCeEEEE
Q 039514 698 DNFAENN-IIGRGGFGSVYGARL---EDGMKIAIKVFHQQC-ASALKSFEAECEVLKKIRHRNLIKVISSCSNDDFKALV 772 (790)
Q Consensus 698 ~~~~~~~-~ig~g~~g~v~~~~~---~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~~~h~nlv~l~~~~~~~~~~~lv 772 (790)
++|.... .||+|+||.||+|.. .+++.||||.++... ....+++.+|++++.+++||||+++++++ ..+..++|
T Consensus 9 ~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~lv 87 (287)
T 1u59_A 9 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLV 87 (287)
T ss_dssp GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSEEEE
T ss_pred HHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCcEEE
Confidence 3455555 899999999999984 357889999998643 34456799999999999999999999999 55678999
Q ss_pred EecCCCCCHHHHHhcC
Q 039514 773 LEYMSNGSLGDWLHSS 788 (790)
Q Consensus 773 ~e~~~~G~L~~~l~~~ 788 (790)
|||+++|+|.+++...
T Consensus 88 ~e~~~~~~L~~~l~~~ 103 (287)
T 1u59_A 88 MEMAGGGPLHKFLVGK 103 (287)
T ss_dssp EECCTTEEHHHHHTTC
T ss_pred EEeCCCCCHHHHHHhC
Confidence 9999999999998643
No 298
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=99.02 E-value=1.6e-10 Score=119.79 Aligned_cols=92 Identities=23% Similarity=0.329 Sum_probs=65.5
Q ss_pred HhcCccccceeccCCcEEEEEEE-EcCCcEEEEEEecccc-hHHHHHHHHHHHHHhcCCCCceeeEeeEEEeCCeEEEEE
Q 039514 696 ATDNFAENNIIGRGGFGSVYGAR-LEDGMKIAIKVFHQQC-ASALKSFEAECEVLKKIRHRNLIKVISSCSNDDFKALVL 773 (790)
Q Consensus 696 ~~~~~~~~~~ig~g~~g~v~~~~-~~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~~~h~nlv~l~~~~~~~~~~~lv~ 773 (790)
..++|...+.||+|+||.||+|. ..+++.||||.+.... ....+++.+|+.++.+++||||+++++++...+..++||
T Consensus 13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 92 (303)
T 2vwi_A 13 NRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVM 92 (303)
T ss_dssp CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEEEEE
T ss_pred chhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEEEe
Confidence 45789999999999999999998 5678999999987543 233466889999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhc
Q 039514 774 EYMSNGSLGDWLHS 787 (790)
Q Consensus 774 e~~~~G~L~~~l~~ 787 (790)
||+++|+|.+++..
T Consensus 93 e~~~~~~L~~~l~~ 106 (303)
T 2vwi_A 93 KLLSGGSVLDIIKH 106 (303)
T ss_dssp ECCTTCBHHHHHHH
T ss_pred hhccCCchHHHHHH
Confidence 99999999999863
No 299
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=99.02 E-value=5.4e-10 Score=115.17 Aligned_cols=89 Identities=24% Similarity=0.406 Sum_probs=75.9
Q ss_pred cCccccceeccCCcEEEEEEEE-cCCcEEEEEEecccc--hHHHHHHHHHHHHHhcCCCCceeeEeeEEEeCCeEEEEEe
Q 039514 698 DNFAENNIIGRGGFGSVYGARL-EDGMKIAIKVFHQQC--ASALKSFEAECEVLKKIRHRNLIKVISSCSNDDFKALVLE 774 (790)
Q Consensus 698 ~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~~~h~nlv~l~~~~~~~~~~~lv~e 774 (790)
++|+..+.||+|+||.||+|.. .+++.||||++.... ....+.+.+|+.++.+++||||+++++++..++..++|||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 81 (292)
T 3o0g_A 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE 81 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEe
Confidence 5688899999999999999994 578999999997533 2334678899999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhc
Q 039514 775 YMSNGSLGDWLHS 787 (790)
Q Consensus 775 ~~~~G~L~~~l~~ 787 (790)
|+++ ++.+++..
T Consensus 82 ~~~~-~l~~~~~~ 93 (292)
T 3o0g_A 82 FCDQ-DLKKYFDS 93 (292)
T ss_dssp CCSE-EHHHHHHH
T ss_pred cCCC-CHHHHHHh
Confidence 9986 66666543
No 300
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=99.02 E-value=4.7e-10 Score=114.52 Aligned_cols=90 Identities=26% Similarity=0.412 Sum_probs=68.7
Q ss_pred cCccccceeccCCcEEEEEEE-EcCCcEEEEEEecccch---HHHHHHHHHHHHHhcCCCCceeeEeeEEEeCCeEEEEE
Q 039514 698 DNFAENNIIGRGGFGSVYGAR-LEDGMKIAIKVFHQQCA---SALKSFEAECEVLKKIRHRNLIKVISSCSNDDFKALVL 773 (790)
Q Consensus 698 ~~~~~~~~ig~g~~g~v~~~~-~~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~~~h~nlv~l~~~~~~~~~~~lv~ 773 (790)
++|+..+.||+|+||.||+|. ..+++.||+|.+..... ...+.+.+|+.++++++||||+++++++.+.+..++||
T Consensus 13 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 92 (275)
T 2eue_A 13 GNYQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI 92 (275)
T ss_dssp CCBCCCC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSCEEEEE
T ss_pred cceEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCeEEEEe
Confidence 578999999999999999998 56789999999975432 22456889999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhcC
Q 039514 774 EYMSNGSLGDWLHSS 788 (790)
Q Consensus 774 e~~~~G~L~~~l~~~ 788 (790)
||+ +|++.+++...
T Consensus 93 e~~-~~~l~~~~~~~ 106 (275)
T 2eue_A 93 EYA-GNELFDYIVQR 106 (275)
T ss_dssp ECC-CEEHHHHHHTS
T ss_pred hhc-CCcHHHHHHhc
Confidence 999 67898887654
No 301
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=99.02 E-value=2.9e-10 Score=116.90 Aligned_cols=90 Identities=27% Similarity=0.457 Sum_probs=75.8
Q ss_pred hcCccccceeccCCcEEEEEEEE-cCCcEEEEEEecccchH---H----HHHHHHHHHHHhcCCCCceeeEeeEEEeCCe
Q 039514 697 TDNFAENNIIGRGGFGSVYGARL-EDGMKIAIKVFHQQCAS---A----LKSFEAECEVLKKIRHRNLIKVISSCSNDDF 768 (790)
Q Consensus 697 ~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~~~---~----~~~~~~e~~~l~~~~h~nlv~l~~~~~~~~~ 768 (790)
.++|...+.||+|+||.||+|.. .+++.||||.+...... . .+.+.+|+.++.+++||||+++++++.+..
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~- 96 (287)
T 4f0f_A 18 DNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP- 96 (287)
T ss_dssp STTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT-
T ss_pred hccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC-
Confidence 36788999999999999999994 67899999998643221 1 157889999999999999999999987655
Q ss_pred EEEEEecCCCCCHHHHHhcC
Q 039514 769 KALVLEYMSNGSLGDWLHSS 788 (790)
Q Consensus 769 ~~lv~e~~~~G~L~~~l~~~ 788 (790)
++||||+++|+|.+++...
T Consensus 97 -~lv~e~~~~~~L~~~l~~~ 115 (287)
T 4f0f_A 97 -RMVMEFVPCGDLYHRLLDK 115 (287)
T ss_dssp -EEEEECCTTCBHHHHHHCT
T ss_pred -eEEEEecCCCCHHHHHhcc
Confidence 6999999999999998654
No 302
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=99.02 E-value=4.4e-10 Score=117.73 Aligned_cols=92 Identities=26% Similarity=0.527 Sum_probs=70.5
Q ss_pred HhcCccccceeccCCcEEEEEEEE-cCCc---EEEEEEeccc--chHHHHHHHHHHHHHhcCCCCceeeEeeEEEeCCeE
Q 039514 696 ATDNFAENNIIGRGGFGSVYGARL-EDGM---KIAIKVFHQQ--CASALKSFEAECEVLKKIRHRNLIKVISSCSNDDFK 769 (790)
Q Consensus 696 ~~~~~~~~~~ig~g~~g~v~~~~~-~~~~---~vavK~~~~~--~~~~~~~~~~e~~~l~~~~h~nlv~l~~~~~~~~~~ 769 (790)
..++|...+.||+|+||.||+|.. .+++ .||||.+... .....+.+.+|++++++++||||+++++++...+..
T Consensus 21 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 100 (323)
T 3qup_A 21 PEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAK 100 (323)
T ss_dssp C---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC---
T ss_pred ChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeeccccc
Confidence 346799999999999999999984 3333 7999999764 233457799999999999999999999999876655
Q ss_pred ------EEEEecCCCCCHHHHHhc
Q 039514 770 ------ALVLEYMSNGSLGDWLHS 787 (790)
Q Consensus 770 ------~lv~e~~~~G~L~~~l~~ 787 (790)
++||||+++|+|.+++..
T Consensus 101 ~~~~~~~~v~e~~~~~~L~~~l~~ 124 (323)
T 3qup_A 101 GRLPIPMVILPFMKHGDLHAFLLA 124 (323)
T ss_dssp ----CEEEEEECCTTCBHHHHHHH
T ss_pred cCCCccEEEEEeccCCcHHHHHHh
Confidence 999999999999999864
No 303
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=99.02 E-value=3.1e-10 Score=118.82 Aligned_cols=91 Identities=30% Similarity=0.395 Sum_probs=74.7
Q ss_pred hcCccccceeccCCcEEEEEEE-EcCCcEEEEEEecccch--------HHHHHHHHHHHHHhcCCCCceeeEeeEEEeCC
Q 039514 697 TDNFAENNIIGRGGFGSVYGAR-LEDGMKIAIKVFHQQCA--------SALKSFEAECEVLKKIRHRNLIKVISSCSNDD 767 (790)
Q Consensus 697 ~~~~~~~~~ig~g~~g~v~~~~-~~~~~~vavK~~~~~~~--------~~~~~~~~e~~~l~~~~h~nlv~l~~~~~~~~ 767 (790)
.++|...+.||+|+||.||+|. ..+++.||||.+..... .....+.+|++++.+++||||+++++++..++
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~ 88 (322)
T 2ycf_A 9 RDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAED 88 (322)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESSS
T ss_pred hhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCCc
Confidence 4678999999999999999999 45689999999965321 11235789999999999999999999987655
Q ss_pred eEEEEEecCCCCCHHHHHhcC
Q 039514 768 FKALVLEYMSNGSLGDWLHSS 788 (790)
Q Consensus 768 ~~~lv~e~~~~G~L~~~l~~~ 788 (790)
.++||||+++|+|.+++...
T Consensus 89 -~~lv~e~~~~~~L~~~~~~~ 108 (322)
T 2ycf_A 89 -YYIVLELMEGGELFDKVVGN 108 (322)
T ss_dssp -EEEEEECCTTEETHHHHSTT
T ss_pred -eEEEEecCCCCcHHHHHhcc
Confidence 89999999999999988653
No 304
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=99.02 E-value=4e-10 Score=117.66 Aligned_cols=99 Identities=22% Similarity=0.420 Sum_probs=81.6
Q ss_pred HHHHHHHhcCccccceeccCCcEEEEEEEE------cCCcEEEEEEecccch-HHHHHHHHHHHHHhcC-CCCceeeEee
Q 039514 690 YLELLQATDNFAENNIIGRGGFGSVYGARL------EDGMKIAIKVFHQQCA-SALKSFEAECEVLKKI-RHRNLIKVIS 761 (790)
Q Consensus 690 ~~~~~~~~~~~~~~~~ig~g~~g~v~~~~~------~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~~-~h~nlv~l~~ 761 (790)
........++|...+.||+|+||.||+|.. .+++.||||.+..... ...+.+.+|+.++.++ +||||+++++
T Consensus 19 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~ 98 (316)
T 2xir_A 19 ASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLG 98 (316)
T ss_dssp HHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred ccceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeEEE
Confidence 334444567899999999999999999983 3468899999976433 3456789999999999 7999999999
Q ss_pred EEEeCC-eEEEEEecCCCCCHHHHHhcC
Q 039514 762 SCSNDD-FKALVLEYMSNGSLGDWLHSS 788 (790)
Q Consensus 762 ~~~~~~-~~~lv~e~~~~G~L~~~l~~~ 788 (790)
++...+ ..++||||+++|+|.+++...
T Consensus 99 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~ 126 (316)
T 2xir_A 99 ACTKPGGPLMVIVEFCKFGNLSTYLRSK 126 (316)
T ss_dssp EECCTTSCCEEEEECCTTEEHHHHHHTC
T ss_pred EEecCCCceEEEEEcCCCCcHHHHHHhc
Confidence 987754 589999999999999999764
No 305
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=99.01 E-value=4.3e-10 Score=115.59 Aligned_cols=92 Identities=23% Similarity=0.339 Sum_probs=80.5
Q ss_pred HhcCccccceeccCCcEEEEEEEE-cCCcEEEEEEecccc--hHHHHHHHHHHHHHhcCCCCceeeEeeEEEeCCeEEEE
Q 039514 696 ATDNFAENNIIGRGGFGSVYGARL-EDGMKIAIKVFHQQC--ASALKSFEAECEVLKKIRHRNLIKVISSCSNDDFKALV 772 (790)
Q Consensus 696 ~~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~~~h~nlv~l~~~~~~~~~~~lv 772 (790)
..++|...+.||+|+||.||+|.. .+++.||||.+.... ....+.+.+|++++++++||||+++++++...+..++|
T Consensus 20 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 99 (287)
T 2wei_A 20 FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIV 99 (287)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred HhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEEE
Confidence 346799999999999999999995 478999999996543 23356788999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHhc
Q 039514 773 LEYMSNGSLGDWLHS 787 (790)
Q Consensus 773 ~e~~~~G~L~~~l~~ 787 (790)
|||+++|+|.+++..
T Consensus 100 ~e~~~~~~L~~~l~~ 114 (287)
T 2wei_A 100 GELYTGGELFDEIIK 114 (287)
T ss_dssp ECCCCSCBHHHHHHH
T ss_pred EEccCCCCHHHHHHh
Confidence 999999999998864
No 306
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=99.01 E-value=4.3e-10 Score=118.39 Aligned_cols=92 Identities=23% Similarity=0.497 Sum_probs=79.5
Q ss_pred HhcCccccceeccCCcEEEEEEEEc-CC-----cEEEEEEecccc-hHHHHHHHHHHHHHhcC-CCCceeeEeeEEEeCC
Q 039514 696 ATDNFAENNIIGRGGFGSVYGARLE-DG-----MKIAIKVFHQQC-ASALKSFEAECEVLKKI-RHRNLIKVISSCSNDD 767 (790)
Q Consensus 696 ~~~~~~~~~~ig~g~~g~v~~~~~~-~~-----~~vavK~~~~~~-~~~~~~~~~e~~~l~~~-~h~nlv~l~~~~~~~~ 767 (790)
..++|...+.||+|+||.||+|... ++ +.||||.+.... ....+.+.+|+.++.++ +||||+++++++..++
T Consensus 44 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 123 (333)
T 2i1m_A 44 PRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGG 123 (333)
T ss_dssp CTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred CHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEecCC
Confidence 4577999999999999999999843 23 479999997643 33456789999999999 8999999999999999
Q ss_pred eEEEEEecCCCCCHHHHHhc
Q 039514 768 FKALVLEYMSNGSLGDWLHS 787 (790)
Q Consensus 768 ~~~lv~e~~~~G~L~~~l~~ 787 (790)
..++||||+++|+|.++++.
T Consensus 124 ~~~lv~e~~~~g~L~~~l~~ 143 (333)
T 2i1m_A 124 PVLVITEYCCYGDLLNFLRR 143 (333)
T ss_dssp SCEEEEECCTTEEHHHHHHH
T ss_pred ceEEEEecCCCCcHHHHHHH
Confidence 99999999999999999874
No 307
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=99.01 E-value=6.1e-10 Score=114.07 Aligned_cols=91 Identities=21% Similarity=0.363 Sum_probs=76.6
Q ss_pred hcCccccceeccCCcEEEEEEEEc----CCcEEEEEEecccc-hHHHHHHHHHHHHHhcCCCCceeeEeeEEEeCCeEEE
Q 039514 697 TDNFAENNIIGRGGFGSVYGARLE----DGMKIAIKVFHQQC-ASALKSFEAECEVLKKIRHRNLIKVISSCSNDDFKAL 771 (790)
Q Consensus 697 ~~~~~~~~~ig~g~~g~v~~~~~~----~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~~~h~nlv~l~~~~~~~~~~~l 771 (790)
.++|+..+.||+|+||.||+|... .+..||+|.+.... ....+.+.+|+.++++++||||+++++++. ++..++
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~l 92 (281)
T 1mp8_A 14 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWI 92 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSCEE
T ss_pred hHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEc-cCccEE
Confidence 467888999999999999999853 24579999987543 334567899999999999999999999984 567899
Q ss_pred EEecCCCCCHHHHHhcC
Q 039514 772 VLEYMSNGSLGDWLHSS 788 (790)
Q Consensus 772 v~e~~~~G~L~~~l~~~ 788 (790)
||||+++|+|.++++..
T Consensus 93 v~e~~~~~~L~~~l~~~ 109 (281)
T 1mp8_A 93 IMELCTLGELRSFLQVR 109 (281)
T ss_dssp EEECCTTEEHHHHHHHT
T ss_pred EEecCCCCCHHHHHHhc
Confidence 99999999999999754
No 308
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=99.00 E-value=9.3e-10 Score=113.93 Aligned_cols=88 Identities=27% Similarity=0.464 Sum_probs=72.1
Q ss_pred hcCccccceeccCCcEEEEEEEEcCCcEEEEEEecccchHHHHHHHHHHHHHhc--CCCCceeeEeeEEEe----CCeEE
Q 039514 697 TDNFAENNIIGRGGFGSVYGARLEDGMKIAIKVFHQQCASALKSFEAECEVLKK--IRHRNLIKVISSCSN----DDFKA 770 (790)
Q Consensus 697 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~--~~h~nlv~l~~~~~~----~~~~~ 770 (790)
.++|+..+.||+|+||.||+|.. +++.||||++.... ...+.+|.+++.. ++||||+++++++.. ....+
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~---~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~ 82 (301)
T 3q4u_A 7 ARDITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSRD---EKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLW 82 (301)
T ss_dssp GGGCEEEEEEEECSSEEEEEEEE-TTEEEEEEEECGGG---HHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEE
T ss_pred cCcEEEEEeeccCCCcEEEEEEE-CCEEEEEEEecccc---chhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeE
Confidence 46788999999999999999987 68999999997643 2445566666655 799999999999765 24689
Q ss_pred EEEecCCCCCHHHHHhcC
Q 039514 771 LVLEYMSNGSLGDWLHSS 788 (790)
Q Consensus 771 lv~e~~~~G~L~~~l~~~ 788 (790)
+||||+++|+|.++++..
T Consensus 83 lv~e~~~~g~L~~~l~~~ 100 (301)
T 3q4u_A 83 LITHYHEMGSLYDYLQLT 100 (301)
T ss_dssp EEECCCTTCBHHHHHTTC
T ss_pred EehhhccCCCHHHHHhhc
Confidence 999999999999998653
No 309
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=99.00 E-value=5.3e-10 Score=127.35 Aligned_cols=83 Identities=24% Similarity=0.469 Sum_probs=71.6
Q ss_pred eeccCCcEEEEEEEEc---CCcEEEEEEecccc-hHHHHHHHHHHHHHhcCCCCceeeEeeEEEeCCeEEEEEecCCCCC
Q 039514 705 IIGRGGFGSVYGARLE---DGMKIAIKVFHQQC-ASALKSFEAECEVLKKIRHRNLIKVISSCSNDDFKALVLEYMSNGS 780 (790)
Q Consensus 705 ~ig~g~~g~v~~~~~~---~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~~~h~nlv~l~~~~~~~~~~~lv~e~~~~G~ 780 (790)
.||+|+||.||+|... ++..||||.++... ....++|.+|+++|++++|||||+++++|.. +..++|||||++|+
T Consensus 343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv~E~~~~g~ 421 (613)
T 2ozo_A 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVMEMAGGGP 421 (613)
T ss_dssp EEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEEEECCTTCB
T ss_pred EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEEEEeCCCCc
Confidence 7999999999999853 45679999997643 2345789999999999999999999999976 56899999999999
Q ss_pred HHHHHhcC
Q 039514 781 LGDWLHSS 788 (790)
Q Consensus 781 L~~~l~~~ 788 (790)
|.++++..
T Consensus 422 L~~~l~~~ 429 (613)
T 2ozo_A 422 LHKFLVGK 429 (613)
T ss_dssp HHHHHTTC
T ss_pred HHHHHhhc
Confidence 99999753
No 310
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=99.00 E-value=1.9e-10 Score=120.72 Aligned_cols=97 Identities=29% Similarity=0.440 Sum_probs=81.8
Q ss_pred HHHHHHHhcCccccceeccCCcEEEEEEEE-cCCcEEEEEEecccchHHHHHHHHHHHHHhcC-CCCceeeEeeEEEe--
Q 039514 690 YLELLQATDNFAENNIIGRGGFGSVYGARL-EDGMKIAIKVFHQQCASALKSFEAECEVLKKI-RHRNLIKVISSCSN-- 765 (790)
Q Consensus 690 ~~~~~~~~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~~-~h~nlv~l~~~~~~-- 765 (790)
+.++......|...+.||+|+||.||+|.. .+++.||||.+..... ..+.+.+|+.++.++ +||||+++++++..
T Consensus 16 ~~~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~ 94 (326)
T 2x7f_A 16 LSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGD-EEEEIKQEINMLKKYSHHRNIATYYGAFIKKN 94 (326)
T ss_dssp CCCCCCCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSS-TTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC
T ss_pred chhccCCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCcc-cHHHHHHHHHHHHhccCCCCeeeeeeEEeecc
Confidence 334445678899999999999999999994 6789999999975432 235688999999998 79999999999987
Q ss_pred ----CCeEEEEEecCCCCCHHHHHhc
Q 039514 766 ----DDFKALVLEYMSNGSLGDWLHS 787 (790)
Q Consensus 766 ----~~~~~lv~e~~~~G~L~~~l~~ 787 (790)
.+..++||||+++|+|.+++..
T Consensus 95 ~~~~~~~~~lv~e~~~~~~L~~~l~~ 120 (326)
T 2x7f_A 95 PPGMDDQLWLVMEFCGAGSVTDLIKN 120 (326)
T ss_dssp --CCCCEEEEEEECCTTEEHHHHHHH
T ss_pred CccccceEEEEEEcCCCCcHHHHHHh
Confidence 4688999999999999999875
No 311
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=99.00 E-value=2.4e-10 Score=118.98 Aligned_cols=89 Identities=21% Similarity=0.268 Sum_probs=73.6
Q ss_pred cCccccceeccCCcEEEEEEEE-cCCcEEEEEEecccc--hHHHHHHHHHHHHHhcC-CCCceeeEeeEEEeCCeEEEEE
Q 039514 698 DNFAENNIIGRGGFGSVYGARL-EDGMKIAIKVFHQQC--ASALKSFEAECEVLKKI-RHRNLIKVISSCSNDDFKALVL 773 (790)
Q Consensus 698 ~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~~-~h~nlv~l~~~~~~~~~~~lv~ 773 (790)
++|+..+.||+|+||.||+|.. .+|+.||||++.... ......+..|+..+.+. +|||||+++++|.+++..++||
T Consensus 57 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv~ 136 (311)
T 3p1a_A 57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQT 136 (311)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEEE
Confidence 5699999999999999999995 479999999986532 23334556666666655 8999999999999999999999
Q ss_pred ecCCCCCHHHHHhc
Q 039514 774 EYMSNGSLGDWLHS 787 (790)
Q Consensus 774 e~~~~G~L~~~l~~ 787 (790)
||+ +|+|.+++..
T Consensus 137 e~~-~~~L~~~~~~ 149 (311)
T 3p1a_A 137 ELC-GPSLQQHCEA 149 (311)
T ss_dssp ECC-CCBHHHHHHH
T ss_pred ecc-CCCHHHHHHh
Confidence 999 6799998765
No 312
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=99.00 E-value=6e-10 Score=116.19 Aligned_cols=90 Identities=27% Similarity=0.406 Sum_probs=73.8
Q ss_pred HHhcCccccceeccCCcEEEEEEEE-cCCcEEEEEEecccchHHHHHHHHHHHHHhcCCCCceeeEeeEEEeCCeEEEEE
Q 039514 695 QATDNFAENNIIGRGGFGSVYGARL-EDGMKIAIKVFHQQCASALKSFEAECEVLKKIRHRNLIKVISSCSNDDFKALVL 773 (790)
Q Consensus 695 ~~~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~~~h~nlv~l~~~~~~~~~~~lv~ 773 (790)
...+.|+..+.||+|+||.||+|.. .+|+.||||.+.... ..+++.+|+.++.+++||||+++++++...+..++||
T Consensus 26 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 103 (314)
T 3com_A 26 QPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES--DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVM 103 (314)
T ss_dssp ----CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS--CCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred cchhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH--HHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEe
Confidence 3457799999999999999999995 568999999997543 2356889999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHh
Q 039514 774 EYMSNGSLGDWLH 786 (790)
Q Consensus 774 e~~~~G~L~~~l~ 786 (790)
||+++|+|.+++.
T Consensus 104 e~~~~~~L~~~~~ 116 (314)
T 3com_A 104 EYCGAGSVSDIIR 116 (314)
T ss_dssp ECCTTEEHHHHHH
T ss_pred ecCCCCCHHHHHH
Confidence 9999999999986
No 313
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=99.00 E-value=5.8e-10 Score=116.60 Aligned_cols=90 Identities=23% Similarity=0.352 Sum_probs=73.1
Q ss_pred hcCccccceeccCCcEEEEEEEE-cCCcEEEEEEecccchHHHHHHHHHHHHHhcCCCCceeeEeeEEE-----------
Q 039514 697 TDNFAENNIIGRGGFGSVYGARL-EDGMKIAIKVFHQQCASALKSFEAECEVLKKIRHRNLIKVISSCS----------- 764 (790)
Q Consensus 697 ~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~~~h~nlv~l~~~~~----------- 764 (790)
.++|...+.||+|+||.||+|.. .+++.||||.+........+++.+|++++++++||||+++++++.
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 89 (320)
T 2i6l_A 10 GSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVG 89 (320)
T ss_dssp TTTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC---
T ss_pred CCceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccccccccc
Confidence 36788999999999999999995 468999999998766666678999999999999999999999873
Q ss_pred ---eCCeEEEEEecCCCCCHHHHHhc
Q 039514 765 ---NDDFKALVLEYMSNGSLGDWLHS 787 (790)
Q Consensus 765 ---~~~~~~lv~e~~~~G~L~~~l~~ 787 (790)
.....++||||++ |+|.++++.
T Consensus 90 ~~~~~~~~~lv~e~~~-~~L~~~~~~ 114 (320)
T 2i6l_A 90 SLTELNSVYIVQEYME-TDLANVLEQ 114 (320)
T ss_dssp -CCSCSEEEEEEECCS-EEHHHHHTT
T ss_pred cccccCceeEEeeccC-CCHHHHhhc
Confidence 3467899999998 699998865
No 314
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=98.99 E-value=2.7e-10 Score=120.91 Aligned_cols=92 Identities=25% Similarity=0.427 Sum_probs=78.5
Q ss_pred hcCccccceeccCCcEEEEEEEE----cCCcEEEEEEecccc----hHHHHHHHHHHHHHhcC-CCCceeeEeeEEEeCC
Q 039514 697 TDNFAENNIIGRGGFGSVYGARL----EDGMKIAIKVFHQQC----ASALKSFEAECEVLKKI-RHRNLIKVISSCSNDD 767 (790)
Q Consensus 697 ~~~~~~~~~ig~g~~g~v~~~~~----~~~~~vavK~~~~~~----~~~~~~~~~e~~~l~~~-~h~nlv~l~~~~~~~~ 767 (790)
..+|...+.||+|+||.||++.. .+++.||||.++... ....+.+.+|++++.++ +||||+++++++...+
T Consensus 53 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 132 (355)
T 1vzo_A 53 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTET 132 (355)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETT
T ss_pred ccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCc
Confidence 36789999999999999999985 478999999997532 12234567899999999 6999999999999999
Q ss_pred eEEEEEecCCCCCHHHHHhcC
Q 039514 768 FKALVLEYMSNGSLGDWLHSS 788 (790)
Q Consensus 768 ~~~lv~e~~~~G~L~~~l~~~ 788 (790)
..++||||+++|+|.+++...
T Consensus 133 ~~~lv~e~~~~~~L~~~l~~~ 153 (355)
T 1vzo_A 133 KLHLILDYINGGELFTHLSQR 153 (355)
T ss_dssp EEEEEECCCCSCBHHHHHHHH
T ss_pred eEEEEeecCCCCCHHHHHHHc
Confidence 999999999999999998753
No 315
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=98.99 E-value=6e-10 Score=118.88 Aligned_cols=89 Identities=20% Similarity=0.299 Sum_probs=75.5
Q ss_pred HhcCccccceeccCCcEEEEEEE------EcCCcEEEEEEecccchHHHHHHHHHHHHHhcCC---CCceeeEeeEEEeC
Q 039514 696 ATDNFAENNIIGRGGFGSVYGAR------LEDGMKIAIKVFHQQCASALKSFEAECEVLKKIR---HRNLIKVISSCSND 766 (790)
Q Consensus 696 ~~~~~~~~~~ig~g~~g~v~~~~------~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~~~---h~nlv~l~~~~~~~ 766 (790)
..++|...+.||+|+||.||+|. ..+++.||||++..... .++.+|+.++.+++ |+||+++++++..+
T Consensus 63 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~---~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~ 139 (365)
T 3e7e_A 63 GSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPANP---WEFYIGTQLMERLKPSMQHMFMKFYSAHLFQ 139 (365)
T ss_dssp SSSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSCCH---HHHHHHHHHHHHSCGGGGGGBCCEEEEEECS
T ss_pred CCEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCCCh---hHHHHHHHHHHHhhhhhhhhhhhhheeeecC
Confidence 34678899999999999999993 56789999999976543 45677777777776 99999999999999
Q ss_pred CeEEEEEecCCCCCHHHHHhc
Q 039514 767 DFKALVLEYMSNGSLGDWLHS 787 (790)
Q Consensus 767 ~~~~lv~e~~~~G~L~~~l~~ 787 (790)
+..++|||||++|+|.++++.
T Consensus 140 ~~~~lv~e~~~~g~L~~~l~~ 160 (365)
T 3e7e_A 140 NGSVLVGELYSYGTLLNAINL 160 (365)
T ss_dssp SCEEEEECCCCSCBHHHHHHH
T ss_pred CCcEEEEeccCCCcHHHHHHH
Confidence 999999999999999999974
No 316
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=98.98 E-value=1.9e-10 Score=121.93 Aligned_cols=87 Identities=17% Similarity=0.307 Sum_probs=77.5
Q ss_pred hcCccccceeccCCcEEEEEEEEcCCcEEEEEEecccchH-----------------HHHHHHHHHHHHhcCCCCceeeE
Q 039514 697 TDNFAENNIIGRGGFGSVYGARLEDGMKIAIKVFHQQCAS-----------------ALKSFEAECEVLKKIRHRNLIKV 759 (790)
Q Consensus 697 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~vavK~~~~~~~~-----------------~~~~~~~e~~~l~~~~h~nlv~l 759 (790)
.++|...+.||+|+||.||+|.. +++.||||.+...... ..+.+.+|+.++.+++||||+++
T Consensus 30 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~ 108 (348)
T 2pml_X 30 INDYRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTC 108 (348)
T ss_dssp ETTEEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCC
T ss_pred cCceEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceE
Confidence 46799999999999999999998 8999999999754221 11678999999999999999999
Q ss_pred eeEEEeCCeEEEEEecCCCCCHHHH
Q 039514 760 ISSCSNDDFKALVLEYMSNGSLGDW 784 (790)
Q Consensus 760 ~~~~~~~~~~~lv~e~~~~G~L~~~ 784 (790)
++++...+..++||||+++|+|.++
T Consensus 109 ~~~~~~~~~~~lv~e~~~~~~L~~~ 133 (348)
T 2pml_X 109 EGIITNYDEVYIIYEYMENDSILKF 133 (348)
T ss_dssp SEEEESSSEEEEEEECCTTCBSSEE
T ss_pred EEEEeeCCeEEEEEeccCCCcHHHH
Confidence 9999999999999999999999887
No 317
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=98.98 E-value=9.2e-10 Score=125.70 Aligned_cols=84 Identities=21% Similarity=0.438 Sum_probs=71.7
Q ss_pred ceeccCCcEEEEEEEE---cCCcEEEEEEecccch--HHHHHHHHHHHHHhcCCCCceeeEeeEEEeCCeEEEEEecCCC
Q 039514 704 NIIGRGGFGSVYGARL---EDGMKIAIKVFHQQCA--SALKSFEAECEVLKKIRHRNLIKVISSCSNDDFKALVLEYMSN 778 (790)
Q Consensus 704 ~~ig~g~~g~v~~~~~---~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~~~h~nlv~l~~~~~~~~~~~lv~e~~~~ 778 (790)
+.||+|+||.||+|.+ .+++.||||+++.... ...+++.+|+++|.+++|||||+++++|.. +..++|||||++
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~lv~E~~~~ 453 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAEL 453 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECCTT
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCEEEEEEccCC
Confidence 5799999999999974 3467899999976432 335789999999999999999999999964 558899999999
Q ss_pred CCHHHHHhcC
Q 039514 779 GSLGDWLHSS 788 (790)
Q Consensus 779 G~L~~~l~~~ 788 (790)
|+|.++++..
T Consensus 454 g~L~~~l~~~ 463 (635)
T 4fl3_A 454 GPLNKYLQQN 463 (635)
T ss_dssp EEHHHHHHHC
T ss_pred CCHHHHHhhC
Confidence 9999999764
No 318
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=98.98 E-value=8.4e-10 Score=113.66 Aligned_cols=91 Identities=20% Similarity=0.405 Sum_probs=74.6
Q ss_pred hcCccccc-eeccCCcEEEEEEEE---cCCcEEEEEEecccch--HHHHHHHHHHHHHhcCCCCceeeEeeEEEeCCeEE
Q 039514 697 TDNFAENN-IIGRGGFGSVYGARL---EDGMKIAIKVFHQQCA--SALKSFEAECEVLKKIRHRNLIKVISSCSNDDFKA 770 (790)
Q Consensus 697 ~~~~~~~~-~ig~g~~g~v~~~~~---~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~~~h~nlv~l~~~~~~~~~~~ 770 (790)
.++|...+ .||+|+||.||+|.. .+++.||||.++.... ...+++.+|+.++.+++||||+++++++ ..+..+
T Consensus 15 ~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~~ 93 (291)
T 1xbb_A 15 RKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWM 93 (291)
T ss_dssp GGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSSEE
T ss_pred chhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCCcE
Confidence 35577767 999999999999963 3468899999975432 2356799999999999999999999999 567789
Q ss_pred EEEecCCCCCHHHHHhcC
Q 039514 771 LVLEYMSNGSLGDWLHSS 788 (790)
Q Consensus 771 lv~e~~~~G~L~~~l~~~ 788 (790)
+||||+++|+|.++++..
T Consensus 94 lv~e~~~~~~L~~~l~~~ 111 (291)
T 1xbb_A 94 LVMEMAELGPLNKYLQQN 111 (291)
T ss_dssp EEEECCTTEEHHHHHHHC
T ss_pred EEEEeCCCCCHHHHHHhC
Confidence 999999999999999764
No 319
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=98.97 E-value=9.7e-10 Score=113.70 Aligned_cols=90 Identities=27% Similarity=0.469 Sum_probs=75.6
Q ss_pred cCccccceeccCCcEEEEEEEE-cCCcEEEEEEecccchH--HHHHHHHHHHHHhcCCCCceeeEeeEEEeCCeEEEEEe
Q 039514 698 DNFAENNIIGRGGFGSVYGARL-EDGMKIAIKVFHQQCAS--ALKSFEAECEVLKKIRHRNLIKVISSCSNDDFKALVLE 774 (790)
Q Consensus 698 ~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~~~h~nlv~l~~~~~~~~~~~lv~e 774 (790)
++|+..+.||+|+||.||+|.. .+|+.||||.+...... ..+.+.+|+.++++++||||+++++++..++..++|||
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (299)
T 2r3i_A 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE 82 (299)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred chhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEEEE
Confidence 5788999999999999999994 57899999999754322 23568899999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhcC
Q 039514 775 YMSNGSLGDWLHSS 788 (790)
Q Consensus 775 ~~~~G~L~~~l~~~ 788 (790)
|++ |+|.+++...
T Consensus 83 ~~~-~~L~~~~~~~ 95 (299)
T 2r3i_A 83 FLH-QDLKKFMDAS 95 (299)
T ss_dssp CCS-EEHHHHHHHT
T ss_pred ccc-CCHHHHHHhh
Confidence 998 6999998754
No 320
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=98.97 E-value=6.4e-10 Score=116.93 Aligned_cols=91 Identities=26% Similarity=0.444 Sum_probs=78.7
Q ss_pred hcCccccceeccCCcEEEEEEEE-cCCcEEEEEEecccc--hHHHHHHHHHHHHHhcCCCCceeeEeeEEEeCCeEEEEE
Q 039514 697 TDNFAENNIIGRGGFGSVYGARL-EDGMKIAIKVFHQQC--ASALKSFEAECEVLKKIRHRNLIKVISSCSNDDFKALVL 773 (790)
Q Consensus 697 ~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~~~h~nlv~l~~~~~~~~~~~lv~ 773 (790)
.++|...+.||+|+||.||+|.. .+|+.||||.+.... ....+.+.+|+.++.+++||||+++++++...+..++||
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 103 (331)
T 4aaa_A 24 MEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVF 103 (331)
T ss_dssp GGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEEE
Confidence 46788999999999999999994 568999999986533 233456889999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhc
Q 039514 774 EYMSNGSLGDWLHS 787 (790)
Q Consensus 774 e~~~~G~L~~~l~~ 787 (790)
||+++|+|.+++..
T Consensus 104 e~~~~~~l~~~~~~ 117 (331)
T 4aaa_A 104 EFVDHTILDDLELF 117 (331)
T ss_dssp ECCSEEHHHHHHHS
T ss_pred ecCCcchHHHHHhh
Confidence 99999998887654
No 321
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=98.97 E-value=2.1e-10 Score=120.60 Aligned_cols=93 Identities=25% Similarity=0.437 Sum_probs=79.6
Q ss_pred HhcCccccceeccCCcEEEEEEE-EcCCcEEEEEEecccchH--------HHHHHHHHHHHHhcCCCCceeeEeeEEEeC
Q 039514 696 ATDNFAENNIIGRGGFGSVYGAR-LEDGMKIAIKVFHQQCAS--------ALKSFEAECEVLKKIRHRNLIKVISSCSND 766 (790)
Q Consensus 696 ~~~~~~~~~~ig~g~~g~v~~~~-~~~~~~vavK~~~~~~~~--------~~~~~~~e~~~l~~~~h~nlv~l~~~~~~~ 766 (790)
..++|...+.||+|+||.||+|. ..+++.||||.+...... ..+.+.+|+.++.+++||||+++++++...
T Consensus 22 ~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~ 101 (335)
T 3dls_A 22 YSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQ 101 (335)
T ss_dssp HHHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECS
T ss_pred cccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeC
Confidence 34679999999999999999998 567899999999754311 223567899999999999999999999999
Q ss_pred CeEEEEEecCCCC-CHHHHHhcC
Q 039514 767 DFKALVLEYMSNG-SLGDWLHSS 788 (790)
Q Consensus 767 ~~~~lv~e~~~~G-~L~~~l~~~ 788 (790)
+..++||||+..| +|.++++..
T Consensus 102 ~~~~lv~e~~~~g~~l~~~~~~~ 124 (335)
T 3dls_A 102 GFFQLVMEKHGSGLDLFAFIDRH 124 (335)
T ss_dssp SEEEEEEECCTTSCBHHHHHHTC
T ss_pred CEEEEEEEeCCCCccHHHHHHhc
Confidence 9999999999887 999998764
No 322
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=98.97 E-value=6.8e-10 Score=118.33 Aligned_cols=99 Identities=21% Similarity=0.285 Sum_probs=82.4
Q ss_pred CHHHHHHHhcCccccceeccCCcEEEEEEEEcCCcEEEEEEecccch-----------HHHHHHHHHHHHHhcCCCCcee
Q 039514 689 SYLELLQATDNFAENNIIGRGGFGSVYGARLEDGMKIAIKVFHQQCA-----------SALKSFEAECEVLKKIRHRNLI 757 (790)
Q Consensus 689 ~~~~~~~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~vavK~~~~~~~-----------~~~~~~~~e~~~l~~~~h~nlv 757 (790)
...++....++|...+.||+|+||.||+|...+|+.||||++..... ...+.+.+|+.++.+++||||+
T Consensus 13 ~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv 92 (362)
T 3pg1_A 13 LIAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNIL 92 (362)
T ss_dssp HHHHHHHTTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBC
T ss_pred HHHHHHHhccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCcc
Confidence 34567778899999999999999999999977799999999854321 1236789999999999999999
Q ss_pred eEeeEEEe-----CCeEEEEEecCCCCCHHHHHhcC
Q 039514 758 KVISSCSN-----DDFKALVLEYMSNGSLGDWLHSS 788 (790)
Q Consensus 758 ~l~~~~~~-----~~~~~lv~e~~~~G~L~~~l~~~ 788 (790)
++++++.. ....|+||||++ |+|.+++...
T Consensus 93 ~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~ 127 (362)
T 3pg1_A 93 GLRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHDQ 127 (362)
T ss_dssp CCSEEEEECCTTTCCEEEEEEECCS-EEHHHHHHCT
T ss_pred ceeeeEEeccCCCcceEEEEEccCC-CCHHHHHHhc
Confidence 99999854 236899999998 6899888754
No 323
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=98.97 E-value=2.8e-10 Score=119.23 Aligned_cols=90 Identities=19% Similarity=0.374 Sum_probs=74.8
Q ss_pred cCccccceeccCCcEEEEEEEE-cCCcEEEEEEecccchHH-HHHHHHHHHHHhcCCCCceeeEeeEEEeCCeEEEEEec
Q 039514 698 DNFAENNIIGRGGFGSVYGARL-EDGMKIAIKVFHQQCASA-LKSFEAECEVLKKIRHRNLIKVISSCSNDDFKALVLEY 775 (790)
Q Consensus 698 ~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~~~~-~~~~~~e~~~l~~~~h~nlv~l~~~~~~~~~~~lv~e~ 775 (790)
++|...+.||+|+||.||+|.. .+++.||||.+....... ...+.+|++++.+++||||+++++++..++..++||||
T Consensus 2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (324)
T 3mtl_A 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY 81 (324)
T ss_dssp CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEecc
Confidence 4688899999999999999994 578999999997543221 12456799999999999999999999999999999999
Q ss_pred CCCCCHHHHHhcC
Q 039514 776 MSNGSLGDWLHSS 788 (790)
Q Consensus 776 ~~~G~L~~~l~~~ 788 (790)
++ |+|.+++...
T Consensus 82 ~~-~~l~~~~~~~ 93 (324)
T 3mtl_A 82 LD-KDLKQYLDDC 93 (324)
T ss_dssp CS-EEHHHHHHHT
T ss_pred cc-cCHHHHHHhc
Confidence 98 5999988754
No 324
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=98.97 E-value=6.8e-10 Score=113.54 Aligned_cols=88 Identities=32% Similarity=0.538 Sum_probs=75.3
Q ss_pred hcCccccceeccCCcEEEEEEEEcCCcEEEEEEecccchHHHHHHHHHHHHHhcCCCCceeeEeeEEEeC-CeEEEEEec
Q 039514 697 TDNFAENNIIGRGGFGSVYGARLEDGMKIAIKVFHQQCASALKSFEAECEVLKKIRHRNLIKVISSCSND-DFKALVLEY 775 (790)
Q Consensus 697 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~~~h~nlv~l~~~~~~~-~~~~lv~e~ 775 (790)
.++|...+.||+|+||.||++.. +|+.||||.++... ..+.+.+|++++.+++||||+++++++... +..++||||
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~ 96 (278)
T 1byg_A 20 MKELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEY 96 (278)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEE-TTEEEEEEECCCCC----HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECC
T ss_pred hhhceEEeEEecCCCceEEEEEE-cCCEEEEEEecchh--HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEec
Confidence 36788999999999999999986 48899999997643 346788999999999999999999997654 478999999
Q ss_pred CCCCCHHHHHhc
Q 039514 776 MSNGSLGDWLHS 787 (790)
Q Consensus 776 ~~~G~L~~~l~~ 787 (790)
+++|+|.+++..
T Consensus 97 ~~~~~L~~~l~~ 108 (278)
T 1byg_A 97 MAKGSLVDYLRS 108 (278)
T ss_dssp CTTEEHHHHHHH
T ss_pred CCCCCHHHHHHh
Confidence 999999999875
No 325
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=98.97 E-value=8.5e-10 Score=120.42 Aligned_cols=91 Identities=25% Similarity=0.372 Sum_probs=78.5
Q ss_pred hcCccccceeccCCcEEEEEEE-EcCCcEEEEEEeccc--chHHHHHHHHHHHHHhcCCCCceeeEeeEEEeC-----Ce
Q 039514 697 TDNFAENNIIGRGGFGSVYGAR-LEDGMKIAIKVFHQQ--CASALKSFEAECEVLKKIRHRNLIKVISSCSND-----DF 768 (790)
Q Consensus 697 ~~~~~~~~~ig~g~~g~v~~~~-~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~~~h~nlv~l~~~~~~~-----~~ 768 (790)
.++|...+.||+|+||.||+|. ..+++.||||++... .....+.+.+|+.++++++|||||++++++... +.
T Consensus 25 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~ 104 (432)
T 3n9x_A 25 PDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDE 104 (432)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred cCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCe
Confidence 4789999999999999999999 567899999999753 234456789999999999999999999999775 57
Q ss_pred EEEEEecCCCCCHHHHHhcC
Q 039514 769 KALVLEYMSNGSLGDWLHSS 788 (790)
Q Consensus 769 ~~lv~e~~~~G~L~~~l~~~ 788 (790)
.|+||||++ |+|.++++..
T Consensus 105 ~~lv~e~~~-~~L~~~~~~~ 123 (432)
T 3n9x_A 105 LYIVLEIAD-SDLKKLFKTP 123 (432)
T ss_dssp EEEEEECCS-EEHHHHHHSS
T ss_pred EEEEEecCC-cCHHHHHhcc
Confidence 899999997 5999998764
No 326
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=98.96 E-value=2.4e-09 Score=113.06 Aligned_cols=91 Identities=29% Similarity=0.507 Sum_probs=77.7
Q ss_pred HHHhcCccccceeccCCcEEEEEEEEcCCcEEEEEEecccchHHHHHHHHHHHHHhc--CCCCceeeEeeEEEeCC----
Q 039514 694 LQATDNFAENNIIGRGGFGSVYGARLEDGMKIAIKVFHQQCASALKSFEAECEVLKK--IRHRNLIKVISSCSNDD---- 767 (790)
Q Consensus 694 ~~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~--~~h~nlv~l~~~~~~~~---- 767 (790)
....++|...+.||+|+||.||+|.. +++.||||.+.... .+.+.+|++++.. ++||||+++++++...+
T Consensus 38 ~~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~---~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~~ 113 (342)
T 1b6c_B 38 RTIARTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSRE---ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWT 113 (342)
T ss_dssp HHHHHHCEEEEEEEEETTEEEEEEEE-TTEEEEEEEECGGG---HHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSCC
T ss_pred ccccccEEEEeeecCCCCcEEEEEEE-cCccEEEEEeCchh---HHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCccc
Confidence 34557799999999999999999987 58999999997543 3557788888876 78999999999998875
Q ss_pred eEEEEEecCCCCCHHHHHhcC
Q 039514 768 FKALVLEYMSNGSLGDWLHSS 788 (790)
Q Consensus 768 ~~~lv~e~~~~G~L~~~l~~~ 788 (790)
..++||||+++|+|.+++++.
T Consensus 114 ~~~lv~e~~~~g~L~~~l~~~ 134 (342)
T 1b6c_B 114 QLWLVSDYHEHGSLFDYLNRY 134 (342)
T ss_dssp CEEEEECCCTTCBHHHHHHHC
T ss_pred eeEEEEeecCCCcHHHHHhcc
Confidence 789999999999999998753
No 327
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=98.96 E-value=4.9e-10 Score=114.92 Aligned_cols=87 Identities=28% Similarity=0.507 Sum_probs=75.0
Q ss_pred hcCccccceeccCCcEEEEEEEE-cCCcEEEEEEecccchHHHHHHHHHHHHHhcCCCCceeeEeeEEEe----------
Q 039514 697 TDNFAENNIIGRGGFGSVYGARL-EDGMKIAIKVFHQQCASALKSFEAECEVLKKIRHRNLIKVISSCSN---------- 765 (790)
Q Consensus 697 ~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~~~h~nlv~l~~~~~~---------- 765 (790)
..+|+..+.||+|+||.||+|.. .+++.||+|.+.... +.+.+|++++.+++||||+++++++..
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~ 85 (284)
T 2a19_B 10 GMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN----EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSK 85 (284)
T ss_dssp HHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS----GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC------
T ss_pred ccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc----HHHHHHHHHHHhCCCCCEEEEeeeEeccccCcccccc
Confidence 35688999999999999999995 478999999997653 246689999999999999999999864
Q ss_pred ------CCeEEEEEecCCCCCHHHHHhc
Q 039514 766 ------DDFKALVLEYMSNGSLGDWLHS 787 (790)
Q Consensus 766 ------~~~~~lv~e~~~~G~L~~~l~~ 787 (790)
....++||||+++|+|.++++.
T Consensus 86 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~ 113 (284)
T 2a19_B 86 NSSRSKTKCLFIQMEFCDKGTLEQWIEK 113 (284)
T ss_dssp ---CCEEEEEEEEECCCCSCBHHHHHHH
T ss_pred cccccCcceEEEEEeccCCCCHHHHHhh
Confidence 3458999999999999999964
No 328
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=98.96 E-value=6.7e-10 Score=118.52 Aligned_cols=90 Identities=29% Similarity=0.564 Sum_probs=74.5
Q ss_pred CccccceeccCCcEEEEEEEEc--CC--cEEEEEEecccc-hHHHHHHHHHHHHHhcCCCCceeeEeeEEEe-CCeEEEE
Q 039514 699 NFAENNIIGRGGFGSVYGARLE--DG--MKIAIKVFHQQC-ASALKSFEAECEVLKKIRHRNLIKVISSCSN-DDFKALV 772 (790)
Q Consensus 699 ~~~~~~~ig~g~~g~v~~~~~~--~~--~~vavK~~~~~~-~~~~~~~~~e~~~l~~~~h~nlv~l~~~~~~-~~~~~lv 772 (790)
.|...+.||+|+||.||+|... ++ ..||||.++... ....++|.+|+.++++++|||||+++++|.. ++..++|
T Consensus 90 ~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv 169 (373)
T 3c1x_A 90 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVV 169 (373)
T ss_dssp EEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEE
T ss_pred eeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEE
Confidence 3566789999999999999842 22 468999987533 3456789999999999999999999999765 5678999
Q ss_pred EecCCCCCHHHHHhcC
Q 039514 773 LEYMSNGSLGDWLHSS 788 (790)
Q Consensus 773 ~e~~~~G~L~~~l~~~ 788 (790)
|||+++|+|.++++..
T Consensus 170 ~e~~~~g~L~~~l~~~ 185 (373)
T 3c1x_A 170 LPYMKHGDLRNFIRNE 185 (373)
T ss_dssp EECCTTCBHHHHHHCT
T ss_pred EECCCCCCHHHHHhhc
Confidence 9999999999999764
No 329
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=98.96 E-value=1.3e-09 Score=115.03 Aligned_cols=90 Identities=24% Similarity=0.375 Sum_probs=78.6
Q ss_pred cCccccceeccCCcEEEEEEEEcCCcEEEEEEeccc--chHHHHHHHHHHHHHhcCCC--CceeeEeeEEEeCCeEEEEE
Q 039514 698 DNFAENNIIGRGGFGSVYGARLEDGMKIAIKVFHQQ--CASALKSFEAECEVLKKIRH--RNLIKVISSCSNDDFKALVL 773 (790)
Q Consensus 698 ~~~~~~~~ig~g~~g~v~~~~~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~~~h--~nlv~l~~~~~~~~~~~lv~ 773 (790)
+.|...+.||+|+||.||++...+++.||||.+... .....+.+.+|+.++.+++| |||+++++++..++..++||
T Consensus 9 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~ 88 (343)
T 3dbq_A 9 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVM 88 (343)
T ss_dssp CEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred CEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEEE
Confidence 568889999999999999999878999999998653 23445678999999999976 99999999999999999999
Q ss_pred ecCCCCCHHHHHhcC
Q 039514 774 EYMSNGSLGDWLHSS 788 (790)
Q Consensus 774 e~~~~G~L~~~l~~~ 788 (790)
| +.+|+|.++++..
T Consensus 89 e-~~~~~L~~~l~~~ 102 (343)
T 3dbq_A 89 E-CGNIDLNSWLKKK 102 (343)
T ss_dssp C-CCSEEHHHHHHHS
T ss_pred e-CCCCCHHHHHHhc
Confidence 9 5678999998764
No 330
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=98.96 E-value=8.8e-10 Score=115.59 Aligned_cols=90 Identities=23% Similarity=0.460 Sum_probs=71.1
Q ss_pred cCccccceeccCCcEEEEEEEE-cCCc----EEEEEEecccc-hHHHHHHHHHHHHHhcCCCCceeeEeeEEEeCCeEEE
Q 039514 698 DNFAENNIIGRGGFGSVYGARL-EDGM----KIAIKVFHQQC-ASALKSFEAECEVLKKIRHRNLIKVISSCSNDDFKAL 771 (790)
Q Consensus 698 ~~~~~~~~ig~g~~g~v~~~~~-~~~~----~vavK~~~~~~-~~~~~~~~~e~~~l~~~~h~nlv~l~~~~~~~~~~~l 771 (790)
.+|...+.||+|+||.||+|.. .+++ .||+|.+.... ....+++.+|+.++++++|||||+++++|..+. .++
T Consensus 15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~~ 93 (327)
T 3poz_A 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQL 93 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS-EEE
T ss_pred HHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC-eEE
Confidence 5688899999999999999984 4454 35888886433 234567999999999999999999999998765 789
Q ss_pred EEecCCCCCHHHHHhcC
Q 039514 772 VLEYMSNGSLGDWLHSS 788 (790)
Q Consensus 772 v~e~~~~G~L~~~l~~~ 788 (790)
|+||+++|+|.++++..
T Consensus 94 v~e~~~~g~L~~~l~~~ 110 (327)
T 3poz_A 94 ITQLMPFGCLLDYVREH 110 (327)
T ss_dssp EEECCTTCBHHHHHHHS
T ss_pred EEEecCCCcHHHHHHhc
Confidence 99999999999999764
No 331
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=98.95 E-value=2.2e-09 Score=113.16 Aligned_cols=90 Identities=30% Similarity=0.505 Sum_probs=74.0
Q ss_pred HHhcCccccceeccCCcEEEEEEEEcCCcEEEEEEecccchHHHHHHHHHHHHHhcC--CCCceeeEeeEEEeC----Ce
Q 039514 695 QATDNFAENNIIGRGGFGSVYGARLEDGMKIAIKVFHQQCASALKSFEAECEVLKKI--RHRNLIKVISSCSND----DF 768 (790)
Q Consensus 695 ~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~~--~h~nlv~l~~~~~~~----~~ 768 (790)
...++|+..+.||+|+||.||+|... ++.||||++..... ..+.+|.+++... +||||+++++++... ..
T Consensus 34 ~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~---~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~ 109 (337)
T 3mdy_A 34 TIAKQIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTTEE---ASWFRETEIYQTVLMRHENILGFIAADIKGTGSWTQ 109 (337)
T ss_dssp THHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEEEGGGH---HHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGGCE
T ss_pred ccccceEEEeEeecCCCeEEEEEEEC-CceEEEEEEecccc---chhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCCCc
Confidence 34577999999999999999999865 89999999965432 3344555555544 899999999999887 78
Q ss_pred EEEEEecCCCCCHHHHHhcC
Q 039514 769 KALVLEYMSNGSLGDWLHSS 788 (790)
Q Consensus 769 ~~lv~e~~~~G~L~~~l~~~ 788 (790)
.++||||+++|+|.++++..
T Consensus 110 ~~lv~e~~~~g~L~~~l~~~ 129 (337)
T 3mdy_A 110 LYLITDYHENGSLYDYLKST 129 (337)
T ss_dssp EEEEECCCTTCBHHHHHHHC
T ss_pred eEEEEeccCCCcHHHHhhcc
Confidence 99999999999999998753
No 332
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=98.95 E-value=1.3e-09 Score=112.70 Aligned_cols=91 Identities=27% Similarity=0.515 Sum_probs=75.2
Q ss_pred cCccccceeccCCcEEEEEEEEcC----CcEEEEEEecccc-hHHHHHHHHHHHHHhcCCCCceeeEeeEEEe-CCeEEE
Q 039514 698 DNFAENNIIGRGGFGSVYGARLED----GMKIAIKVFHQQC-ASALKSFEAECEVLKKIRHRNLIKVISSCSN-DDFKAL 771 (790)
Q Consensus 698 ~~~~~~~~ig~g~~g~v~~~~~~~----~~~vavK~~~~~~-~~~~~~~~~e~~~l~~~~h~nlv~l~~~~~~-~~~~~l 771 (790)
..|...+.||+|+||.||+|.... +..||||.+.... ....+.+.+|+.++++++||||++++++|.. ++..++
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 104 (298)
T 3f66_A 25 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLV 104 (298)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEE
T ss_pred eehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceEE
Confidence 457788999999999999998432 2358999997643 3445678999999999999999999998654 567899
Q ss_pred EEecCCCCCHHHHHhcC
Q 039514 772 VLEYMSNGSLGDWLHSS 788 (790)
Q Consensus 772 v~e~~~~G~L~~~l~~~ 788 (790)
||||+++|+|.++++..
T Consensus 105 v~e~~~~~~L~~~l~~~ 121 (298)
T 3f66_A 105 VLPYMKHGDLRNFIRNE 121 (298)
T ss_dssp EEECCTTCBHHHHHHCT
T ss_pred EEeCCCCCCHHHHHHhc
Confidence 99999999999999753
No 333
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=98.95 E-value=1.5e-09 Score=112.13 Aligned_cols=89 Identities=24% Similarity=0.433 Sum_probs=74.2
Q ss_pred CccccceeccCCcEEEEEEEE-cCCc---EEEEEEecccc-hHHHHHHHHHHHHHhcCCCCceeeEeeEEEeCCeE-EEE
Q 039514 699 NFAENNIIGRGGFGSVYGARL-EDGM---KIAIKVFHQQC-ASALKSFEAECEVLKKIRHRNLIKVISSCSNDDFK-ALV 772 (790)
Q Consensus 699 ~~~~~~~ig~g~~g~v~~~~~-~~~~---~vavK~~~~~~-~~~~~~~~~e~~~l~~~~h~nlv~l~~~~~~~~~~-~lv 772 (790)
.|...+.||+|+||.||+|.. .+++ .||+|.+.... ....+.+.+|+.++++++||||+++++++.+.+.. ++|
T Consensus 22 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v 101 (298)
T 3pls_A 22 VTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVL 101 (298)
T ss_dssp EEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEE
T ss_pred EEccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEE
Confidence 355568999999999999984 3333 79999997643 34456789999999999999999999999876554 999
Q ss_pred EecCCCCCHHHHHhc
Q 039514 773 LEYMSNGSLGDWLHS 787 (790)
Q Consensus 773 ~e~~~~G~L~~~l~~ 787 (790)
|||+++|+|.++++.
T Consensus 102 ~e~~~~~~L~~~~~~ 116 (298)
T 3pls_A 102 LPYMCHGDLLQFIRS 116 (298)
T ss_dssp ECCCTTCBHHHHHHC
T ss_pred EecccCCCHHHHHhc
Confidence 999999999999976
No 334
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=98.94 E-value=1.4e-09 Score=111.27 Aligned_cols=90 Identities=24% Similarity=0.539 Sum_probs=75.8
Q ss_pred hcCccccceeccCCcEEEEEEEEcC----CcEEEEEEecccc-hHHHHHHHHHHHHHhcCCCCceeeEeeEEEeCCeEEE
Q 039514 697 TDNFAENNIIGRGGFGSVYGARLED----GMKIAIKVFHQQC-ASALKSFEAECEVLKKIRHRNLIKVISSCSNDDFKAL 771 (790)
Q Consensus 697 ~~~~~~~~~ig~g~~g~v~~~~~~~----~~~vavK~~~~~~-~~~~~~~~~e~~~l~~~~h~nlv~l~~~~~~~~~~~l 771 (790)
.++|...+.||+|+||.||+|.... ++.||||.+.... ....+.+.+|+.++++++||||+++++++.+ +..++
T Consensus 11 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~ 89 (281)
T 3cc6_A 11 REDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE-EPTWI 89 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECS-SSCEE
T ss_pred ccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CCCEE
Confidence 4678899999999999999998432 3469999997653 3445679999999999999999999999865 45689
Q ss_pred EEecCCCCCHHHHHhc
Q 039514 772 VLEYMSNGSLGDWLHS 787 (790)
Q Consensus 772 v~e~~~~G~L~~~l~~ 787 (790)
||||+++|+|.++++.
T Consensus 90 v~e~~~~~~L~~~l~~ 105 (281)
T 3cc6_A 90 IMELYPYGELGHYLER 105 (281)
T ss_dssp EEECCTTCBHHHHHHH
T ss_pred EEecCCCCCHHHHHHh
Confidence 9999999999999875
No 335
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=98.94 E-value=1.1e-09 Score=117.94 Aligned_cols=87 Identities=17% Similarity=0.282 Sum_probs=71.3
Q ss_pred hcCcccc-ceeccCCcEEEEEEE-EcCCcEEEEEEecccchHHHHHHHHHHHHHh-cCCCCceeeEeeEEEe----CCeE
Q 039514 697 TDNFAEN-NIIGRGGFGSVYGAR-LEDGMKIAIKVFHQQCASALKSFEAECEVLK-KIRHRNLIKVISSCSN----DDFK 769 (790)
Q Consensus 697 ~~~~~~~-~~ig~g~~g~v~~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~-~~~h~nlv~l~~~~~~----~~~~ 769 (790)
.++|... ++||+|+||.||+|. ..+++.||||+++.. ..+.+|+.++. ..+||||+++++++.. .+..
T Consensus 60 ~~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~-----~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~ 134 (400)
T 1nxk_A 60 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCL 134 (400)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEE
T ss_pred cccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCcc-----hhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEE
Confidence 3556665 789999999999998 457899999999643 34567888764 4589999999999875 5678
Q ss_pred EEEEecCCCCCHHHHHhcC
Q 039514 770 ALVLEYMSNGSLGDWLHSS 788 (790)
Q Consensus 770 ~lv~e~~~~G~L~~~l~~~ 788 (790)
|+|||||++|+|.++++..
T Consensus 135 ~lv~E~~~gg~L~~~l~~~ 153 (400)
T 1nxk_A 135 LIVMECLDGGELFSRIQDR 153 (400)
T ss_dssp EEEEECCCSEEHHHHHHCC
T ss_pred EEEEEeCCCCcHHHHHHHh
Confidence 9999999999999999864
No 336
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=98.94 E-value=8e-10 Score=116.92 Aligned_cols=93 Identities=22% Similarity=0.397 Sum_probs=72.5
Q ss_pred HHhcCccccceeccCCcEEEEEEE-EcCCcEEEEEEecccchHH-----HHHHHHHHHHHhcCCCCceeeEeeEEEeCCe
Q 039514 695 QATDNFAENNIIGRGGFGSVYGAR-LEDGMKIAIKVFHQQCASA-----LKSFEAECEVLKKIRHRNLIKVISSCSNDDF 768 (790)
Q Consensus 695 ~~~~~~~~~~~ig~g~~g~v~~~~-~~~~~~vavK~~~~~~~~~-----~~~~~~e~~~l~~~~h~nlv~l~~~~~~~~~ 768 (790)
...++|...+.||+|+||.||+|. ..+|+.||||.+....... .+.+.+|+.++.+++||||+++++++...+.
T Consensus 7 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 86 (346)
T 1ua2_A 7 SRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSN 86 (346)
T ss_dssp ------CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTC
T ss_pred HHhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCc
Confidence 345779999999999999999999 4578999999997533211 2357899999999999999999999999999
Q ss_pred EEEEEecCCCCCHHHHHhcC
Q 039514 769 KALVLEYMSNGSLGDWLHSS 788 (790)
Q Consensus 769 ~~lv~e~~~~G~L~~~l~~~ 788 (790)
.++||||+++ +|.+++...
T Consensus 87 ~~lv~e~~~~-~l~~~~~~~ 105 (346)
T 1ua2_A 87 ISLVFDFMET-DLEVIIKDN 105 (346)
T ss_dssp CEEEEECCSE-EHHHHHTTC
T ss_pred eEEEEEcCCC-CHHHHHHhc
Confidence 9999999986 898888753
No 337
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=98.94 E-value=8.8e-10 Score=121.47 Aligned_cols=91 Identities=22% Similarity=0.323 Sum_probs=68.4
Q ss_pred hcCccccceeccCCcEEEEEEE-EcCCcEEEEEEeccc--chHHHHHHHHHHHHHhcCCCCceeeEeeEEEeC-----Ce
Q 039514 697 TDNFAENNIIGRGGFGSVYGAR-LEDGMKIAIKVFHQQ--CASALKSFEAECEVLKKIRHRNLIKVISSCSND-----DF 768 (790)
Q Consensus 697 ~~~~~~~~~ig~g~~g~v~~~~-~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~~~h~nlv~l~~~~~~~-----~~ 768 (790)
.++|...+.||+|+||.||+|. ..+++.||||++... .....+.+.+|+.++.+++|||||++++++... ..
T Consensus 52 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 131 (458)
T 3rp9_A 52 PDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDE 131 (458)
T ss_dssp CTTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred CCCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCce
Confidence 3679999999999999999998 567899999999653 234456789999999999999999999998543 57
Q ss_pred EEEEEecCCCCCHHHHHhcC
Q 039514 769 KALVLEYMSNGSLGDWLHSS 788 (790)
Q Consensus 769 ~~lv~e~~~~G~L~~~l~~~ 788 (790)
.|+||||+. |+|.++++..
T Consensus 132 ~~lv~e~~~-~~L~~~~~~~ 150 (458)
T 3rp9_A 132 LYVVLEIAD-SDFKKLFRTP 150 (458)
T ss_dssp EEEEECCCS-EEHHHHHHSS
T ss_pred EEEEEeccc-cchhhhcccC
Confidence 899999985 6999998764
No 338
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=98.93 E-value=1.7e-09 Score=111.77 Aligned_cols=87 Identities=17% Similarity=0.306 Sum_probs=72.8
Q ss_pred hcCcccc-ceeccCCcEEEEEEE-EcCCcEEEEEEecccchHHHHHHHHHHHHH-hcCCCCceeeEeeEEEe----CCeE
Q 039514 697 TDNFAEN-NIIGRGGFGSVYGAR-LEDGMKIAIKVFHQQCASALKSFEAECEVL-KKIRHRNLIKVISSCSN----DDFK 769 (790)
Q Consensus 697 ~~~~~~~-~~ig~g~~g~v~~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l-~~~~h~nlv~l~~~~~~----~~~~ 769 (790)
.++|... ++||+|+||.||+|. ..+++.||||.++.. ..+.+|+.++ +..+||||+++++++.. +...
T Consensus 16 ~~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-----~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~ 90 (299)
T 3m2w_A 16 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCL 90 (299)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEE
T ss_pred ccchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEeccc-----HHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceE
Confidence 3556666 789999999999999 467899999999653 3456788887 55689999999999977 6778
Q ss_pred EEEEecCCCCCHHHHHhcC
Q 039514 770 ALVLEYMSNGSLGDWLHSS 788 (790)
Q Consensus 770 ~lv~e~~~~G~L~~~l~~~ 788 (790)
++||||+++|+|.+++...
T Consensus 91 ~lv~e~~~~~~L~~~l~~~ 109 (299)
T 3m2w_A 91 LIVMECLDGGELFSRIQDR 109 (299)
T ss_dssp EEEECCCCSCBHHHHHHHC
T ss_pred EEEEeecCCCcHHHHHHhc
Confidence 9999999999999999764
No 339
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=98.93 E-value=1.9e-09 Score=113.18 Aligned_cols=87 Identities=22% Similarity=0.418 Sum_probs=76.8
Q ss_pred cCccccceeccCCcEEEEEEE-EcCCcEEEEEEecccchHHHHHHHHHHHHHhcCC-CCceeeEeeEEEe--CCeEEEEE
Q 039514 698 DNFAENNIIGRGGFGSVYGAR-LEDGMKIAIKVFHQQCASALKSFEAECEVLKKIR-HRNLIKVISSCSN--DDFKALVL 773 (790)
Q Consensus 698 ~~~~~~~~ig~g~~g~v~~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~~~-h~nlv~l~~~~~~--~~~~~lv~ 773 (790)
++|+..+.||+|+||.||+|. ..+++.||||.+.... .+.+.+|+.++.+++ ||||+++++++.. ....++||
T Consensus 36 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv~ 112 (330)
T 3nsz_A 36 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVK---KKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVF 112 (330)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCC---HHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEEE
T ss_pred CceEEEEEecccCCeEEEEEEECCCCcEEEEEEecccc---hHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEEE
Confidence 678899999999999999998 5678999999997543 356889999999997 9999999999987 66789999
Q ss_pred ecCCCCCHHHHHhc
Q 039514 774 EYMSNGSLGDWLHS 787 (790)
Q Consensus 774 e~~~~G~L~~~l~~ 787 (790)
||+++|+|.++++.
T Consensus 113 e~~~~~~l~~~~~~ 126 (330)
T 3nsz_A 113 EHVNNTDFKQLYQT 126 (330)
T ss_dssp ECCCCCCHHHHGGG
T ss_pred eccCchhHHHHHHh
Confidence 99999999988753
No 340
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=98.93 E-value=7e-10 Score=116.56 Aligned_cols=87 Identities=24% Similarity=0.313 Sum_probs=76.2
Q ss_pred cCccccceeccCCcEEEEEEE-EcCCcEEEEEEecccchHHHHHHHHHHHHHhcC-CCCceeeEeeEEEeCCeEEEEEec
Q 039514 698 DNFAENNIIGRGGFGSVYGAR-LEDGMKIAIKVFHQQCASALKSFEAECEVLKKI-RHRNLIKVISSCSNDDFKALVLEY 775 (790)
Q Consensus 698 ~~~~~~~~ig~g~~g~v~~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~~-~h~nlv~l~~~~~~~~~~~lv~e~ 775 (790)
.+|...+.||+|+||.||+|. ..+++.||||.+..... .+.+.+|++++.++ +||||+++++++..++..++||||
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~ 86 (330)
T 2izr_A 9 PNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSR--APQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLEL 86 (330)
T ss_dssp TTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCS--SCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEEC
T ss_pred CCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccc--hHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEEe
Confidence 578899999999999999999 57799999999865432 23578899999999 899999999999999999999999
Q ss_pred CCCCCHHHHHhc
Q 039514 776 MSNGSLGDWLHS 787 (790)
Q Consensus 776 ~~~G~L~~~l~~ 787 (790)
+ +|+|.+++..
T Consensus 87 ~-~~~L~~~~~~ 97 (330)
T 2izr_A 87 L-GPSLEDLFDL 97 (330)
T ss_dssp C-CCBHHHHHHH
T ss_pred C-CCCHHHHHHH
Confidence 9 9999999875
No 341
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=98.93 E-value=1.8e-09 Score=116.09 Aligned_cols=90 Identities=24% Similarity=0.369 Sum_probs=78.1
Q ss_pred cCccccceeccCCcEEEEEEEEcCCcEEEEEEeccc--chHHHHHHHHHHHHHhcCC--CCceeeEeeEEEeCCeEEEEE
Q 039514 698 DNFAENNIIGRGGFGSVYGARLEDGMKIAIKVFHQQ--CASALKSFEAECEVLKKIR--HRNLIKVISSCSNDDFKALVL 773 (790)
Q Consensus 698 ~~~~~~~~ig~g~~g~v~~~~~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~~~--h~nlv~l~~~~~~~~~~~lv~ 773 (790)
+.|...+.||+|+||.||+|...+++.||||.+... .....+.+.+|+.++.+++ |||||++++++..++..|+||
T Consensus 56 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~ 135 (390)
T 2zmd_A 56 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVM 135 (390)
T ss_dssp EEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred CceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEE
Confidence 458899999999999999999777999999999653 2344567999999999996 599999999999999999999
Q ss_pred ecCCCCCHHHHHhcC
Q 039514 774 EYMSNGSLGDWLHSS 788 (790)
Q Consensus 774 e~~~~G~L~~~l~~~ 788 (790)
| +.+|+|.++++..
T Consensus 136 E-~~~~~L~~~l~~~ 149 (390)
T 2zmd_A 136 E-CGNIDLNSWLKKK 149 (390)
T ss_dssp E-CCSEEHHHHHHHC
T ss_pred e-cCCCCHHHHHHhc
Confidence 9 5688999998764
No 342
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=98.93 E-value=1.8e-09 Score=112.08 Aligned_cols=90 Identities=21% Similarity=0.434 Sum_probs=73.8
Q ss_pred hcCccccceeccCCcEEEEEEE-EcCCcEEEEEEecccch----HHHHHHHHHHHHHhcCCCCceeeEeeEEE--eCCeE
Q 039514 697 TDNFAENNIIGRGGFGSVYGAR-LEDGMKIAIKVFHQQCA----SALKSFEAECEVLKKIRHRNLIKVISSCS--NDDFK 769 (790)
Q Consensus 697 ~~~~~~~~~ig~g~~g~v~~~~-~~~~~~vavK~~~~~~~----~~~~~~~~e~~~l~~~~h~nlv~l~~~~~--~~~~~ 769 (790)
.++|...+.||+|+||.||++. ..+++.||||.+..... ...+.+.+|+.++.+++||||+++++++. ..+..
T Consensus 4 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 83 (305)
T 2wtk_C 4 IGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKM 83 (305)
T ss_dssp -CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CE
T ss_pred ccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeE
Confidence 4679999999999999999999 46789999999976432 23567899999999999999999999984 45578
Q ss_pred EEEEecCCCCCHHHHHhc
Q 039514 770 ALVLEYMSNGSLGDWLHS 787 (790)
Q Consensus 770 ~lv~e~~~~G~L~~~l~~ 787 (790)
++||||+++| +.+++..
T Consensus 84 ~lv~e~~~~~-l~~~~~~ 100 (305)
T 2wtk_C 84 YMVMEYCVCG-MQEMLDS 100 (305)
T ss_dssp EEEEECCSEE-HHHHHHH
T ss_pred EEEehhccCC-HHHHHHh
Confidence 9999999987 7777654
No 343
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=98.93 E-value=1.5e-09 Score=113.07 Aligned_cols=91 Identities=25% Similarity=0.506 Sum_probs=72.7
Q ss_pred HhcCccccceeccCCcEEEEEEEEc----CCcEEEEEEecccc--hHHHHHHHHHHHHHhcCCCCceeeEeeEEEeCC--
Q 039514 696 ATDNFAENNIIGRGGFGSVYGARLE----DGMKIAIKVFHQQC--ASALKSFEAECEVLKKIRHRNLIKVISSCSNDD-- 767 (790)
Q Consensus 696 ~~~~~~~~~~ig~g~~g~v~~~~~~----~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~~~h~nlv~l~~~~~~~~-- 767 (790)
..++|...+.||+|+||.||+|... +++.||||.+.... ....+.+.+|+.++++++||||+++++++...+
T Consensus 32 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~ 111 (313)
T 3brb_A 32 DRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQ 111 (313)
T ss_dssp CGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC----
T ss_pred CHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeecccc
Confidence 4567888999999999999999843 34589999997542 334567899999999999999999999998754
Q ss_pred ---eEEEEEecCCCCCHHHHHh
Q 039514 768 ---FKALVLEYMSNGSLGDWLH 786 (790)
Q Consensus 768 ---~~~lv~e~~~~G~L~~~l~ 786 (790)
..++||||+++|+|.+++.
T Consensus 112 ~~~~~~~v~e~~~~~~L~~~l~ 133 (313)
T 3brb_A 112 GIPKPMVILPFMKYGDLHTYLL 133 (313)
T ss_dssp ---CEEEEEECCTTCBHHHHHH
T ss_pred CCcccEEEEecccCCCHHHHHH
Confidence 3599999999999999985
No 344
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=98.92 E-value=1.1e-09 Score=126.12 Aligned_cols=93 Identities=20% Similarity=0.269 Sum_probs=79.8
Q ss_pred HhcCccccceeccCCcEEEEEEE-EcCCcEEEEEEecccch---HHHHHHHHHHHHHhcC-CCCceeeEeeEEEeCCeEE
Q 039514 696 ATDNFAENNIIGRGGFGSVYGAR-LEDGMKIAIKVFHQQCA---SALKSFEAECEVLKKI-RHRNLIKVISSCSNDDFKA 770 (790)
Q Consensus 696 ~~~~~~~~~~ig~g~~g~v~~~~-~~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~~-~h~nlv~l~~~~~~~~~~~ 770 (790)
...+|+..++||+|+||.||+|+ ..+++.||||+++.... ...+.+..|..++..+ +||+|+++++++.+.+..|
T Consensus 339 ~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~ 418 (674)
T 3pfq_A 339 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY 418 (674)
T ss_dssp -CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEE
T ss_pred cccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEE
Confidence 45789999999999999999999 45788999999976432 2235678899999988 7999999999999999999
Q ss_pred EEEecCCCCCHHHHHhcC
Q 039514 771 LVLEYMSNGSLGDWLHSS 788 (790)
Q Consensus 771 lv~e~~~~G~L~~~l~~~ 788 (790)
+||||+++|+|.++++..
T Consensus 419 lV~E~~~gg~L~~~l~~~ 436 (674)
T 3pfq_A 419 FVMEYVNGGDLMYHIQQV 436 (674)
T ss_dssp EEEECCCSCBHHHHHHHH
T ss_pred EEEeCcCCCcHHHHHHhc
Confidence 999999999999999763
No 345
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=98.92 E-value=9e-08 Score=102.48 Aligned_cols=143 Identities=16% Similarity=0.191 Sum_probs=74.9
Q ss_pred ccCCCCCCEEeccCCcccccCcccccCCCCCccccccCCcccCCCCcccccccCCCCCCCCEEEccCCCCcccCCchhhh
Q 039514 278 ITNASKLTVLELGGNTFSGLIPDTIGNLRNLEWLNLSKNSLTSSTSKLSFLSSLANCKKLRSLKLAGNPLDGFLPSSIGN 357 (790)
Q Consensus 278 ~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~ 357 (790)
+....+|+.+.+..+ +..+....|..+..|+.+.+..+ ++.+.. .++..+.+|+.+.+..+ +.......|..
T Consensus 213 f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~-----~aF~~~~~l~~i~l~~~-i~~i~~~aF~~ 284 (379)
T 4h09_A 213 FSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGS-----FLLQNCTALKTLNFYAK-VKTVPYLLCSG 284 (379)
T ss_dssp TTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECT-----TTTTTCTTCCEEEECCC-CSEECTTTTTT
T ss_pred cccccccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCc-----cccceeehhcccccccc-ceecccccccc
Confidence 334444555544332 23333444555555555555433 222221 23455555666655433 22222223333
Q ss_pred hcccCcEEEeecCcCcccCchhhhccCCcceeeeccccccCccccccccccccCeEEeeccccCccCCcccccc
Q 039514 358 LSKSLETLVIANCSISGNIPQAISNLSNLLTLVLERNKLTGPISITFGRLQKLQGLYLASNNLVGSFPDELCHI 431 (790)
Q Consensus 358 l~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l 431 (790)
. .+|+.+.+.++.++.+...+|.++.+|+.+.+..+ ++.+...+|.++.+|+.+.+..+ ++.+-..+|.+.
T Consensus 285 c-~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~ip~~-v~~I~~~aF~~c 355 (379)
T 4h09_A 285 C-SNLTKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA-LKTIQVYAFKNCKALSTISYPKS-ITLIESGAFEGS 355 (379)
T ss_dssp C-TTCCEEEECCTTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCCCCCCTT-CCEECTTTTTTS
T ss_pred c-cccccccccccccceehhhhhcCCCCCCEEEcCcc-ccEEHHHHhhCCCCCCEEEECCc-cCEEchhHhhCC
Confidence 2 45666776666666555667777777777777543 55555667777777777776543 443444445443
No 346
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=98.91 E-value=1.9e-09 Score=115.99 Aligned_cols=92 Identities=18% Similarity=0.355 Sum_probs=70.5
Q ss_pred HHhcCccccceeccCCcEEEEEEE-EcCCcEEEEEEeccc--chHHHHHHHHHHHHHhcCC-CCceeeEeeEEEeCC--e
Q 039514 695 QATDNFAENNIIGRGGFGSVYGAR-LEDGMKIAIKVFHQQ--CASALKSFEAECEVLKKIR-HRNLIKVISSCSNDD--F 768 (790)
Q Consensus 695 ~~~~~~~~~~~ig~g~~g~v~~~~-~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~~~-h~nlv~l~~~~~~~~--~ 768 (790)
...++|+..+.||+|+||.||+|. ..+|+.||||++... .....+.+.+|+.++.++. |||||++++++...+ .
T Consensus 6 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~ 85 (388)
T 3oz6_A 6 HVLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRD 85 (388)
T ss_dssp HHHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSC
T ss_pred cccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCE
Confidence 356789999999999999999998 567999999998643 2344567889999999997 999999999997644 7
Q ss_pred EEEEEecCCCCCHHHHHhc
Q 039514 769 KALVLEYMSNGSLGDWLHS 787 (790)
Q Consensus 769 ~~lv~e~~~~G~L~~~l~~ 787 (790)
.|+|||||+ |+|.++++.
T Consensus 86 ~~lv~e~~~-~~L~~~~~~ 103 (388)
T 3oz6_A 86 VYLVFDYME-TDLHAVIRA 103 (388)
T ss_dssp EEEEEECCS-EEHHHHHHH
T ss_pred EEEEecccC-cCHHHHHHc
Confidence 899999998 589998875
No 347
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=98.90 E-value=9.7e-10 Score=115.27 Aligned_cols=93 Identities=19% Similarity=0.231 Sum_probs=78.0
Q ss_pred HHhcCcccc-ceeccCCcEEEEEEE-EcCCcEEEEEEecccch--HHHHHHHHHHHHHhcC-CCCceeeEeeEEEeCCeE
Q 039514 695 QATDNFAEN-NIIGRGGFGSVYGAR-LEDGMKIAIKVFHQQCA--SALKSFEAECEVLKKI-RHRNLIKVISSCSNDDFK 769 (790)
Q Consensus 695 ~~~~~~~~~-~~ig~g~~g~v~~~~-~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~~-~h~nlv~l~~~~~~~~~~ 769 (790)
.....|... +.||+|+||.||+|. ..+++.||||.+..... ....++.+|+.++.++ .||||+++++++...+..
T Consensus 25 ~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~~~~ 104 (327)
T 3lm5_A 25 NFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENTSEI 104 (327)
T ss_dssp HHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEE
T ss_pred hhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEeCCeE
Confidence 344556665 889999999999999 45789999999975432 2356788999999999 579999999999999999
Q ss_pred EEEEecCCCCCHHHHHhc
Q 039514 770 ALVLEYMSNGSLGDWLHS 787 (790)
Q Consensus 770 ~lv~e~~~~G~L~~~l~~ 787 (790)
++||||+++|+|.+++..
T Consensus 105 ~lv~e~~~~~~L~~~~~~ 122 (327)
T 3lm5_A 105 ILILEYAAGGEIFSLCLP 122 (327)
T ss_dssp EEEEECCTTEEGGGGGSS
T ss_pred EEEEEecCCCcHHHHHHH
Confidence 999999999999998754
No 348
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=98.90 E-value=2.7e-09 Score=109.76 Aligned_cols=90 Identities=16% Similarity=0.226 Sum_probs=71.9
Q ss_pred hcCccccceeccCCcEEEEEEE-EcCCcEEEEEEecccch-HHH-HHHHHHHHHHhcCCCCceeeEeeEEEeCCeEEEEE
Q 039514 697 TDNFAENNIIGRGGFGSVYGAR-LEDGMKIAIKVFHQQCA-SAL-KSFEAECEVLKKIRHRNLIKVISSCSNDDFKALVL 773 (790)
Q Consensus 697 ~~~~~~~~~ig~g~~g~v~~~~-~~~~~~vavK~~~~~~~-~~~-~~~~~e~~~l~~~~h~nlv~l~~~~~~~~~~~lv~ 773 (790)
.++|+..+.||+|+||.||+|. ..+|+.||||++..... ... +.+.++...++.++||||+++++++..++..++||
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~ 85 (290)
T 3fme_A 6 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICM 85 (290)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEEE
T ss_pred HHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEEE
Confidence 4678899999999999999999 46799999999976432 222 33445555678889999999999999999999999
Q ss_pred ecCCCCCHHHHHhc
Q 039514 774 EYMSNGSLGDWLHS 787 (790)
Q Consensus 774 e~~~~G~L~~~l~~ 787 (790)
||++ |+|.++++.
T Consensus 86 e~~~-~~l~~~l~~ 98 (290)
T 3fme_A 86 ELMD-TSLDKFYKQ 98 (290)
T ss_dssp ECCS-EEHHHHHHH
T ss_pred ehhc-cchHHHHHH
Confidence 9998 588887753
No 349
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=98.90 E-value=1.4e-09 Score=116.75 Aligned_cols=87 Identities=23% Similarity=0.452 Sum_probs=70.0
Q ss_pred HHhcCccccceeccCCcEEEEEEE-EcCCcEEEEEEecccchHHHHHHHHHHHHHhcCCCCceeeEeeEEEe--------
Q 039514 695 QATDNFAENNIIGRGGFGSVYGAR-LEDGMKIAIKVFHQQCASALKSFEAECEVLKKIRHRNLIKVISSCSN-------- 765 (790)
Q Consensus 695 ~~~~~~~~~~~ig~g~~g~v~~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~~~h~nlv~l~~~~~~-------- 765 (790)
...++|...+.||+|+||.||+|. ..+|+.||||++..... ...+|+++++.++|||||++++++..
T Consensus 4 ~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~----~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~ 79 (383)
T 3eb0_A 4 TSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPR----YKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPKP 79 (383)
T ss_dssp --CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTT----SCCHHHHHHTTCCCTTBCCEEEEEEEC-------
T ss_pred cccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcc----hHHHHHHHHHHcCCCCccchhheeeecCcccccc
Confidence 356789999999999999999998 57899999999865432 12379999999999999999999844
Q ss_pred ------------------------------CCeEEEEEecCCCCCHHHHHh
Q 039514 766 ------------------------------DDFKALVLEYMSNGSLGDWLH 786 (790)
Q Consensus 766 ------------------------------~~~~~lv~e~~~~G~L~~~l~ 786 (790)
....++||||++ |+|.+.++
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~ 129 (383)
T 3eb0_A 80 PQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLK 129 (383)
T ss_dssp ------------------------------CCEEEEEECCCS-EEHHHHHH
T ss_pred cccccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHH
Confidence 334889999998 58877765
No 350
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=98.90 E-value=2.5e-09 Score=112.81 Aligned_cols=90 Identities=17% Similarity=0.303 Sum_probs=74.7
Q ss_pred hcCccccceeccCCcEEEEEEE-EcCCcEEEEEEecccc-hHHHHHHHHHHHH-HhcCCCCceeeEeeEEEeCCeEEEEE
Q 039514 697 TDNFAENNIIGRGGFGSVYGAR-LEDGMKIAIKVFHQQC-ASALKSFEAECEV-LKKIRHRNLIKVISSCSNDDFKALVL 773 (790)
Q Consensus 697 ~~~~~~~~~ig~g~~g~v~~~~-~~~~~~vavK~~~~~~-~~~~~~~~~e~~~-l~~~~h~nlv~l~~~~~~~~~~~lv~ 773 (790)
.++|...+.||+|+||.||+|. ..+|+.||||++.... .....++..|... ++.++||||+++++++..++..++||
T Consensus 50 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~ 129 (340)
T 3an0_A 50 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICM 129 (340)
T ss_dssp SSCEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCCHHHHHHHHHHHHHHTTCCCTTTCCEEEEEECSSCEEEEE
T ss_pred hhheeEeeEecccCCEEEEEEEEcCCCCEEEEEEeccccCcHHHHHHHHHHHHHHhhcCCCcEEEEeeEEEeCCcEEEEH
Confidence 4678889999999999999999 4679999999997543 2334455566655 77889999999999999999999999
Q ss_pred ecCCCCCHHHHHhc
Q 039514 774 EYMSNGSLGDWLHS 787 (790)
Q Consensus 774 e~~~~G~L~~~l~~ 787 (790)
||+++ +|.++++.
T Consensus 130 e~~~~-~L~~~l~~ 142 (340)
T 3an0_A 130 ELMDT-SLDKFYKQ 142 (340)
T ss_dssp CCCSE-EHHHHHHH
T ss_pred HHhhC-cHHHHHHH
Confidence 99985 99888763
No 351
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=98.90 E-value=2.9e-09 Score=113.72 Aligned_cols=90 Identities=21% Similarity=0.256 Sum_probs=76.0
Q ss_pred hcCccccceeccCCcEEEEEEE-EcCCcEEEEEEeccc--chHHHHHHHHHHHHHhcCCCCceeeEeeEEEeCC------
Q 039514 697 TDNFAENNIIGRGGFGSVYGAR-LEDGMKIAIKVFHQQ--CASALKSFEAECEVLKKIRHRNLIKVISSCSNDD------ 767 (790)
Q Consensus 697 ~~~~~~~~~ig~g~~g~v~~~~-~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~~~h~nlv~l~~~~~~~~------ 767 (790)
.++|...+.||+|+||.||+|. ..+++.||||.+... .....+.+.+|+.+++.++||||+++++++...+
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~ 103 (371)
T 2xrw_A 24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQ 103 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCC
T ss_pred hhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeecccccccccc
Confidence 4679999999999999999998 567899999999753 2334567889999999999999999999997654
Q ss_pred eEEEEEecCCCCCHHHHHhc
Q 039514 768 FKALVLEYMSNGSLGDWLHS 787 (790)
Q Consensus 768 ~~~lv~e~~~~G~L~~~l~~ 787 (790)
..|+||||+++ +|.+++..
T Consensus 104 ~~~lv~e~~~~-~l~~~~~~ 122 (371)
T 2xrw_A 104 DVYIVMELMDA-NLCQVIQM 122 (371)
T ss_dssp EEEEEEECCSE-EHHHHHHS
T ss_pred ceEEEEEcCCC-CHHHHHhh
Confidence 78999999985 78887753
No 352
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=98.90 E-value=6e-10 Score=119.42 Aligned_cols=90 Identities=16% Similarity=0.219 Sum_probs=72.0
Q ss_pred hcCccccceeccCCcEEEEEEE-EcCCcEEEEEEeccc---chHHHHHHHHHH---HHHhcCCCCceeeEe-------eE
Q 039514 697 TDNFAENNIIGRGGFGSVYGAR-LEDGMKIAIKVFHQQ---CASALKSFEAEC---EVLKKIRHRNLIKVI-------SS 762 (790)
Q Consensus 697 ~~~~~~~~~ig~g~~g~v~~~~-~~~~~~vavK~~~~~---~~~~~~~~~~e~---~~l~~~~h~nlv~l~-------~~ 762 (790)
.++|...+.||+|+||.||+|. ..+|+.||||++... .....+.+.+|+ +.+++++|||||+++ ++
T Consensus 72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~ 151 (377)
T 3byv_A 72 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 151 (377)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEE
T ss_pred CceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhh
Confidence 4678889999999999999999 577999999999743 233456788999 556666899999998 55
Q ss_pred EEeCC-----------------eEEEEEecCCCCCHHHHHhc
Q 039514 763 CSNDD-----------------FKALVLEYMSNGSLGDWLHS 787 (790)
Q Consensus 763 ~~~~~-----------------~~~lv~e~~~~G~L~~~l~~ 787 (790)
+...+ ..|+||||+ +|+|.++++.
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~ 192 (377)
T 3byv_A 152 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEV 192 (377)
T ss_dssp EECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHH
T ss_pred hhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHh
Confidence 55443 278999999 6899999875
No 353
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=98.90 E-value=1.7e-09 Score=113.98 Aligned_cols=89 Identities=24% Similarity=0.367 Sum_probs=76.3
Q ss_pred cCccccceeccCCcEEEEEEE-EcCCcEEEEEEecccchHHHHHHHHHHHHHhcCC-CCceeeEeeEEE--------eCC
Q 039514 698 DNFAENNIIGRGGFGSVYGAR-LEDGMKIAIKVFHQQCASALKSFEAECEVLKKIR-HRNLIKVISSCS--------NDD 767 (790)
Q Consensus 698 ~~~~~~~~ig~g~~g~v~~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~~~-h~nlv~l~~~~~--------~~~ 767 (790)
.+|...+.||+|+||.||+|. ..+++.||||++........+.+.+|+.++.++. ||||+++++++. ...
T Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~~ 107 (337)
T 3ll6_A 28 LRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQA 107 (337)
T ss_dssp EEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSSE
T ss_pred ceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccCCc
Confidence 568889999999999999999 4578999999997666556677899999999996 999999999994 334
Q ss_pred eEEEEEecCCCCCHHHHHhc
Q 039514 768 FKALVLEYMSNGSLGDWLHS 787 (790)
Q Consensus 768 ~~~lv~e~~~~G~L~~~l~~ 787 (790)
..++||||++ |+|.++++.
T Consensus 108 ~~~lv~e~~~-g~L~~~l~~ 126 (337)
T 3ll6_A 108 EFLLLTELCK-GQLVEFLKK 126 (337)
T ss_dssp EEEEEEECCS-EEHHHHHHH
T ss_pred eEEEEEEecC-CCHHHHHHH
Confidence 5899999996 799998864
No 354
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=98.90 E-value=1e-09 Score=116.87 Aligned_cols=90 Identities=27% Similarity=0.408 Sum_probs=70.7
Q ss_pred hcCccccceeccCCcEEEEEEE-EcCCcEEEEEEeccc--chHHHHHHHHHHHHHhcCCCCceeeEeeEEEeCC------
Q 039514 697 TDNFAENNIIGRGGFGSVYGAR-LEDGMKIAIKVFHQQ--CASALKSFEAECEVLKKIRHRNLIKVISSCSNDD------ 767 (790)
Q Consensus 697 ~~~~~~~~~ig~g~~g~v~~~~-~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~~~h~nlv~l~~~~~~~~------ 767 (790)
.+.|...+.||+|+||.||+|. ..+|+.||||.+... .....+.+.+|++++++++||||+++++++...+
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 103 (367)
T 1cm8_A 24 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFT 103 (367)
T ss_dssp BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCC
T ss_pred cceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCc
Confidence 4679999999999999999999 467999999999643 2334567889999999999999999999997653
Q ss_pred eEEEEEecCCCCCHHHHHhc
Q 039514 768 FKALVLEYMSNGSLGDWLHS 787 (790)
Q Consensus 768 ~~~lv~e~~~~G~L~~~l~~ 787 (790)
..|+||||+ +++|.++++.
T Consensus 104 ~~~lv~e~~-~~~L~~~~~~ 122 (367)
T 1cm8_A 104 DFYLVMPFM-GTDLGKLMKH 122 (367)
T ss_dssp CCEEEEECC-SEEHHHHHHH
T ss_pred eEEEEEecC-CCCHHHHHhc
Confidence 469999999 7899999875
No 355
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=98.89 E-value=1.2e-10 Score=122.79 Aligned_cols=89 Identities=24% Similarity=0.325 Sum_probs=69.8
Q ss_pred hcCccccceeccCCcEEEEEEEEcCCcEEEEEEecccch--------HHHHHHHHHHHHHhcCC---------CCceeeE
Q 039514 697 TDNFAENNIIGRGGFGSVYGARLEDGMKIAIKVFHQQCA--------SALKSFEAECEVLKKIR---------HRNLIKV 759 (790)
Q Consensus 697 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~vavK~~~~~~~--------~~~~~~~~e~~~l~~~~---------h~nlv~l 759 (790)
.++|...+.||+|+||.||+|+. +|+.||||++..... ...+.+.+|+.++++++ |||||++
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l 97 (336)
T 2vuw_A 19 TEKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGL 97 (336)
T ss_dssp HHHHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCE
T ss_pred cccchheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhh
Confidence 35688899999999999999987 789999999975421 12366788888888775 7777777
Q ss_pred eeEEE------------------------------eCCeEEEEEecCCCCCHHHHHh
Q 039514 760 ISSCS------------------------------NDDFKALVLEYMSNGSLGDWLH 786 (790)
Q Consensus 760 ~~~~~------------------------------~~~~~~lv~e~~~~G~L~~~l~ 786 (790)
.+.+. ..+..|+|||||++|++.+.+.
T Consensus 98 ~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~ 154 (336)
T 2vuw_A 98 NSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMR 154 (336)
T ss_dssp EEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGT
T ss_pred cceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHH
Confidence 76643 2678999999999997766654
No 356
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=98.89 E-value=1.5e-09 Score=119.35 Aligned_cols=89 Identities=22% Similarity=0.279 Sum_probs=74.6
Q ss_pred hcCccccceeccCCcEEEEEEE-EcCCcEEEEEEeccc--chHHHHHHHHHHHHHhcCCCCceeeEeeEEEeC------C
Q 039514 697 TDNFAENNIIGRGGFGSVYGAR-LEDGMKIAIKVFHQQ--CASALKSFEAECEVLKKIRHRNLIKVISSCSND------D 767 (790)
Q Consensus 697 ~~~~~~~~~ig~g~~g~v~~~~-~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~~~h~nlv~l~~~~~~~------~ 767 (790)
.++|+..+.||+|+||.||+|. ..+++.||||++... .....+.+.+|+.+++.++|||||++++++... .
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 140 (464)
T 3ttj_A 61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQ 140 (464)
T ss_dssp ETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCC
T ss_pred cCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCC
Confidence 4779999999999999999998 567899999999754 233456788999999999999999999999654 4
Q ss_pred eEEEEEecCCCCCHHHHHh
Q 039514 768 FKALVLEYMSNGSLGDWLH 786 (790)
Q Consensus 768 ~~~lv~e~~~~G~L~~~l~ 786 (790)
..|+|||||++| +.+.++
T Consensus 141 ~~~lv~E~~~~~-l~~~~~ 158 (464)
T 3ttj_A 141 DVYLVMELMDAN-LCQVIQ 158 (464)
T ss_dssp EEEEEEECCSEE-HHHHHT
T ss_pred eEEEEEeCCCCC-HHHHHh
Confidence 679999999864 666654
No 357
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=98.89 E-value=1.8e-07 Score=100.08 Aligned_cols=284 Identities=12% Similarity=0.083 Sum_probs=150.7
Q ss_pred cCCccccCCCCCCEEeccCCcccccCcccccCCCCCccccccCCcccCCCCcccccccCCCCCCCCEEEccCCCCcccCC
Q 039514 273 TIPSSITNASKLTVLELGGNTFSGLIPDTIGNLRNLEWLNLSKNSLTSSTSKLSFLSSLANCKKLRSLKLAGNPLDGFLP 352 (790)
Q Consensus 273 ~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~p 352 (790)
....+|.++.+|+.+++..+ ++.+...+|.+. +|+.+.+..+ ++.+.. .+|..+ +|+.+.+..+.. ....
T Consensus 60 Ig~~aF~~C~~L~~I~lp~~-v~~Ig~~aF~~c-~l~~i~~~~~-l~~I~~-----~aF~~~-~L~~i~lp~~~~-~i~~ 129 (379)
T 4h09_A 60 IGEANFNSCYNMTKVTVAST-VTSIGDGAFADT-KLQSYTGMER-VKKFGD-----YVFQGT-DLDDFEFPGATT-EIGN 129 (379)
T ss_dssp ECTTTTTTCTTCCEEEECTT-CCEECTTTTTTC-CCCEEEECTT-CCEECT-----TTTTTC-CCSEEECCTTCC-EECT
T ss_pred hHHHHhhCCCCCCEEEeCCc-ceEechhhhcCC-CCceEECCce-eeEecc-----ceeccC-CcccccCCCccc-cccc
Confidence 34455666666666666533 444555555554 4554444322 222221 123332 566666654422 1112
Q ss_pred chhhhhcccCcEEEeecCcCcccCchhhhccCCcceeeeccccccCccccccccccccCeEEeeccccCccCCccccccc
Q 039514 353 SSIGNLSKSLETLVIANCSISGNIPQAISNLSNLLTLVLERNKLTGPISITFGRLQKLQGLYLASNNLVGSFPDELCHIG 432 (790)
Q Consensus 353 ~~~~~l~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~ 432 (790)
..|.. .+++.+.+..+ ++......|..+.+++.+.+..+.........+ ...... .....+....
T Consensus 130 ~~F~~--~~l~~~~~~~~-v~~i~~~~f~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~-----------~~~~~~~~~~ 194 (379)
T 4h09_A 130 YIFYN--SSVKRIVIPKS-VTTIKDGIGYKAENLEKIEVSSNNKNYVAENYV-LYNKNK-----------TILESYPAAK 194 (379)
T ss_dssp TTTTT--CCCCEEEECTT-CCEECSCTTTTCTTCCEEEECTTCSSEEEETTE-EEETTS-----------SEEEECCTTC
T ss_pred ccccc--ceeeeeeccce-eeccccchhcccccccccccccccceeecccce-eccccc-----------ceeccccccc
Confidence 22222 24555444332 333344455666666666655443221111000 000000 0011111222
Q ss_pred cccceecccCcccccCCccccCCCCCCeeeccCCccccccCcccccCCCCceEeccCCcccccccccccccccCceEeCc
Q 039514 433 RLAELALLDNRHSGSIPSCVSNLTSLRYLYLGSNRFTFVIPSTFWSLKDILFFDFSSNFLVGTLSFDIGNLKVLLGINLS 512 (790)
Q Consensus 433 ~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls 512 (790)
.+..+.+... ........+..+.+|+.+.+..+ +..+....|.....|+.+.+..+ ++......|.++..|+.+.+.
T Consensus 195 ~~~~~~~~~~-~~~i~~~~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~ 271 (379)
T 4h09_A 195 TGTEFTIPST-VKTVTAYGFSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFY 271 (379)
T ss_dssp CCSEEECCTT-CCEECTTTTTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEEC
T ss_pred cccccccccc-eeEEeecccccccccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceeehhcccccc
Confidence 2222222221 11223344555666776666543 44455566677777777777655 555556667777777777775
Q ss_pred CCcccccCcccccCCcccCeeeCCCCcccccCCccccCCCCCCEEECCCCcCcccCCccccccCCCCeEeCCCC
Q 039514 513 ENNLSGDMPATIGGLKDLQFMDLAYNRLEGPIPESFGDLTSLEVLNLSKNKISGSIPKSMEKLFYLRELNLSFN 586 (790)
Q Consensus 513 ~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N 586 (790)
.+ +..+....|.++.+|+.+++.++.++.+...+|.++++|+.+.|..+ ++..-..+|.++.+|+.+.+..+
T Consensus 272 ~~-i~~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~ip~~ 343 (379)
T 4h09_A 272 AK-VKTVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA-LKTIQVYAFKNCKALSTISYPKS 343 (379)
T ss_dssp CC-CSEECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCCCCCCTT
T ss_pred cc-ceeccccccccccccccccccccccceehhhhhcCCCCCCEEEcCcc-ccEEHHHHhhCCCCCCEEEECCc
Confidence 43 55566677888888888888888787777778888888888888654 55555677888888888877544
No 358
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=98.89 E-value=2.7e-09 Score=109.74 Aligned_cols=89 Identities=28% Similarity=0.480 Sum_probs=74.8
Q ss_pred hcCccccceeccCCcEEEEEEEEcCCcEEEEEEecccc--hHHHHHHHHHHHHHhcCCCCceeeEeeEEEeCCeEEEEEe
Q 039514 697 TDNFAENNIIGRGGFGSVYGARLEDGMKIAIKVFHQQC--ASALKSFEAECEVLKKIRHRNLIKVISSCSNDDFKALVLE 774 (790)
Q Consensus 697 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~~~h~nlv~l~~~~~~~~~~~lv~e 774 (790)
..+|...+.||+|+||.||+|... ..||||.+.... ....+.+.+|+.++++++||||+++++++ ..+..++|||
T Consensus 23 ~~~y~~~~~lG~G~~g~Vy~~~~~--~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~lv~e 99 (289)
T 3og7_A 23 DGQITVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAIVTQ 99 (289)
T ss_dssp TTSCEEEEEEEECSSEEEEEEESS--SEEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSCEEEEE
T ss_pred ccceeeeeEecCCCCeEEEEEEEc--CceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCccEEEEE
Confidence 467889999999999999999753 369999997543 34456799999999999999999999966 4566899999
Q ss_pred cCCCCCHHHHHhcC
Q 039514 775 YMSNGSLGDWLHSS 788 (790)
Q Consensus 775 ~~~~G~L~~~l~~~ 788 (790)
|+++|+|.++++..
T Consensus 100 ~~~~~~L~~~l~~~ 113 (289)
T 3og7_A 100 WCEGSSLYHHLHAS 113 (289)
T ss_dssp CCCEEEHHHHHTTC
T ss_pred ecCCCcHHHHHhhc
Confidence 99999999998643
No 359
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=98.87 E-value=8.9e-10 Score=115.47 Aligned_cols=90 Identities=20% Similarity=0.434 Sum_probs=72.8
Q ss_pred cCccccceeccCCcEEEEEEEE-cCCcE----EEEEEecccc-hHHHHHHHHHHHHHhcCCCCceeeEeeEEEeCCeEEE
Q 039514 698 DNFAENNIIGRGGFGSVYGARL-EDGMK----IAIKVFHQQC-ASALKSFEAECEVLKKIRHRNLIKVISSCSNDDFKAL 771 (790)
Q Consensus 698 ~~~~~~~~ig~g~~g~v~~~~~-~~~~~----vavK~~~~~~-~~~~~~~~~e~~~l~~~~h~nlv~l~~~~~~~~~~~l 771 (790)
++|...+.||+|+||.||+|.. .+++. ||+|.+.... ....+.+.+|+.++.+++||||+++++++. ++..++
T Consensus 13 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~ 91 (325)
T 3kex_A 13 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSLQL 91 (325)
T ss_dssp TTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSSEEE
T ss_pred hHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCccEE
Confidence 5688899999999999999994 45554 7888775432 122245678999999999999999999986 456899
Q ss_pred EEecCCCCCHHHHHhcC
Q 039514 772 VLEYMSNGSLGDWLHSS 788 (790)
Q Consensus 772 v~e~~~~G~L~~~l~~~ 788 (790)
||||+++|+|.++++..
T Consensus 92 v~e~~~~~~L~~~l~~~ 108 (325)
T 3kex_A 92 VTQYLPLGSLLDHVRQH 108 (325)
T ss_dssp EEECCTTCBSHHHHHSS
T ss_pred EEEeCCCCCHHHHHHHc
Confidence 99999999999998753
No 360
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=98.87 E-value=3.7e-09 Score=121.21 Aligned_cols=91 Identities=22% Similarity=0.369 Sum_probs=76.6
Q ss_pred hcCccccceeccCCcEEEEEEEEc----CCcEEEEEEecccc-hHHHHHHHHHHHHHhcCCCCceeeEeeEEEeCCeEEE
Q 039514 697 TDNFAENNIIGRGGFGSVYGARLE----DGMKIAIKVFHQQC-ASALKSFEAECEVLKKIRHRNLIKVISSCSNDDFKAL 771 (790)
Q Consensus 697 ~~~~~~~~~ig~g~~g~v~~~~~~----~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~~~h~nlv~l~~~~~~~~~~~l 771 (790)
.++|...+.||+|+||.||+|... .+..||||.+.... ....+.+.+|+.++++++|||||+++|++. ++..|+
T Consensus 389 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~~~l 467 (656)
T 2j0j_A 389 RERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWI 467 (656)
T ss_dssp GGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEE
T ss_pred cccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-cCceEE
Confidence 466888999999999999999853 24679999987543 334567999999999999999999999985 456899
Q ss_pred EEecCCCCCHHHHHhcC
Q 039514 772 VLEYMSNGSLGDWLHSS 788 (790)
Q Consensus 772 v~e~~~~G~L~~~l~~~ 788 (790)
||||+++|+|.++++..
T Consensus 468 v~E~~~~g~L~~~l~~~ 484 (656)
T 2j0j_A 468 IMELCTLGELRSFLQVR 484 (656)
T ss_dssp EEECCTTCBHHHHHHHT
T ss_pred EEEcCCCCcHHHHHHhc
Confidence 99999999999999754
No 361
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=98.86 E-value=5.3e-09 Score=109.66 Aligned_cols=89 Identities=18% Similarity=0.303 Sum_probs=73.1
Q ss_pred hcCccccceeccCCcEEEEEEEE-cCCcEEEEEEecccc-hHHHHHHHHHHH-HHhcCCCCceeeEeeEEEeCCeEEEEE
Q 039514 697 TDNFAENNIIGRGGFGSVYGARL-EDGMKIAIKVFHQQC-ASALKSFEAECE-VLKKIRHRNLIKVISSCSNDDFKALVL 773 (790)
Q Consensus 697 ~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~-~~~~~~~~~e~~-~l~~~~h~nlv~l~~~~~~~~~~~lv~ 773 (790)
.++|...+.||+|+||.||+|.. .+|+.||||.+.... .....++.+|+. +++.++||||+++++++..++..++||
T Consensus 21 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~ 100 (327)
T 3aln_A 21 AEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICM 100 (327)
T ss_dssp SCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEE
Confidence 36788899999999999999995 578999999997643 233445666666 677789999999999999999999999
Q ss_pred ecCCCCCHHHHHh
Q 039514 774 EYMSNGSLGDWLH 786 (790)
Q Consensus 774 e~~~~G~L~~~l~ 786 (790)
||+++ +|.+++.
T Consensus 101 e~~~~-~l~~~~~ 112 (327)
T 3aln_A 101 ELMST-SFDKFYK 112 (327)
T ss_dssp CCCSE-EHHHHHH
T ss_pred eecCC-ChHHHHH
Confidence 99985 7887765
No 362
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=98.86 E-value=1.9e-09 Score=124.90 Aligned_cols=90 Identities=22% Similarity=0.322 Sum_probs=74.4
Q ss_pred cCccccceeccCCcEEEEEEEEc--CCcEEEEEEecccc-hHHHHHHHHHHHHHhcCCCCceeeEeeEEEeCCe-----E
Q 039514 698 DNFAENNIIGRGGFGSVYGARLE--DGMKIAIKVFHQQC-ASALKSFEAECEVLKKIRHRNLIKVISSCSNDDF-----K 769 (790)
Q Consensus 698 ~~~~~~~~ig~g~~g~v~~~~~~--~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~~~h~nlv~l~~~~~~~~~-----~ 769 (790)
++|...+.||+|+||.||+|... +|+.||||.+.... ......+.+|+.++.+++|||||++++++...+. .
T Consensus 80 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~ 159 (681)
T 2pzi_A 80 GQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPVG 159 (681)
T ss_dssp TTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEEE
T ss_pred CceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCcee
Confidence 67999999999999999999954 68999999986533 3445678999999999999999999999987654 7
Q ss_pred EEEEecCCCCCHHHHHhc
Q 039514 770 ALVLEYMSNGSLGDWLHS 787 (790)
Q Consensus 770 ~lv~e~~~~G~L~~~l~~ 787 (790)
|+||||+++|+|.+++..
T Consensus 160 ~lv~E~~~g~~L~~~~~~ 177 (681)
T 2pzi_A 160 YIVMEYVGGQSLKRSKGQ 177 (681)
T ss_dssp EEEEECCCCEECC----C
T ss_pred EEEEEeCCCCcHHHHHhC
Confidence 999999999999887653
No 363
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=98.86 E-value=3.7e-09 Score=111.36 Aligned_cols=88 Identities=33% Similarity=0.478 Sum_probs=69.4
Q ss_pred hcCccccceeccCCcEEEEEEEEcCCcEEEEEEecccchHHHHHHHHHH--HHHhcCCCCceeeEeeEEEe-----CCeE
Q 039514 697 TDNFAENNIIGRGGFGSVYGARLEDGMKIAIKVFHQQCASALKSFEAEC--EVLKKIRHRNLIKVISSCSN-----DDFK 769 (790)
Q Consensus 697 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~--~~l~~~~h~nlv~l~~~~~~-----~~~~ 769 (790)
.++|...+.||+|+||.||+|.. +++.||||++..... ..+..|. ..+..++||||+++++.+.. ....
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~---~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~ 87 (336)
T 3g2f_A 12 LDNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFANR---QNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEY 87 (336)
T ss_dssp TTSEEEEEEEEECSSEEEEEEEE-TTEEEEEEEEEGGGH---HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEE
T ss_pred hHHhheeeecccCCCeEEEEEEE-CCeEEEEEEeeccch---hhHHHHHHHHHHHhccCcchhhheecccccccCCCceE
Confidence 46789999999999999999976 689999999975432 2333344 44556899999999986543 2367
Q ss_pred EEEEecCCCCCHHHHHhcC
Q 039514 770 ALVLEYMSNGSLGDWLHSS 788 (790)
Q Consensus 770 ~lv~e~~~~G~L~~~l~~~ 788 (790)
++||||+++|+|.++++..
T Consensus 88 ~lv~e~~~~g~L~~~l~~~ 106 (336)
T 3g2f_A 88 LLVMEYYPNGSLXKYLSLH 106 (336)
T ss_dssp EEEECCCTTCBHHHHHHHC
T ss_pred EEEEecCCCCcHHHHHhhc
Confidence 8999999999999999754
No 364
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=98.86 E-value=4.1e-09 Score=109.35 Aligned_cols=89 Identities=27% Similarity=0.467 Sum_probs=74.5
Q ss_pred hcCccccceeccCCcEEEEEEEEcCCcEEEEEEeccc--chHHHHHHHHHHHHHhcCCCCceeeEeeEEEeCCeEEEEEe
Q 039514 697 TDNFAENNIIGRGGFGSVYGARLEDGMKIAIKVFHQQ--CASALKSFEAECEVLKKIRHRNLIKVISSCSNDDFKALVLE 774 (790)
Q Consensus 697 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~~~h~nlv~l~~~~~~~~~~~lv~e 774 (790)
..+|...+.||+|+||.||+|... ..+|||.++.. .....+.+.+|++++.+++||||+++++++. .+..++|||
T Consensus 35 ~~~~~~~~~lG~G~~g~Vy~~~~~--~~~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~lv~e 111 (307)
T 3lb7_A 35 ASEVMLSTRIGSGSFGTVYKGKWH--GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMT-KDNLAIVTQ 111 (307)
T ss_dssp TTSCCEEEEEEECSSCEEEEEESS--SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEEE
T ss_pred ccceEEEeEecCCCCeEEEEEEEC--CEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc-cCcEEEEEe
Confidence 467888999999999999999753 46899988753 2334567899999999999999999999875 455899999
Q ss_pred cCCCCCHHHHHhcC
Q 039514 775 YMSNGSLGDWLHSS 788 (790)
Q Consensus 775 ~~~~G~L~~~l~~~ 788 (790)
|+++|+|.++++..
T Consensus 112 ~~~~~~L~~~l~~~ 125 (307)
T 3lb7_A 112 WCEGSSLYKHLHVQ 125 (307)
T ss_dssp CCSSCBHHHHHHTS
T ss_pred cCCCCcHHHHHHhc
Confidence 99999999999743
No 365
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=98.85 E-value=4.2e-09 Score=111.72 Aligned_cols=90 Identities=22% Similarity=0.331 Sum_probs=76.7
Q ss_pred hcCccccceeccCCcEEEEEEEE-cCCcEEEEEEecccc-hHHHHHHHHHHHHHhcCCCCceeeEeeEEEeC-----CeE
Q 039514 697 TDNFAENNIIGRGGFGSVYGARL-EDGMKIAIKVFHQQC-ASALKSFEAECEVLKKIRHRNLIKVISSCSND-----DFK 769 (790)
Q Consensus 697 ~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~~~h~nlv~l~~~~~~~-----~~~ 769 (790)
.++|...+.||+|+||.||+|.. .+|+.||||.+.... ......+.+|+.++.+++||||+++++++... ...
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 89 (353)
T 2b9h_A 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEV 89 (353)
T ss_dssp CTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCE
T ss_pred ccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceE
Confidence 46799999999999999999994 578999999997543 33456788999999999999999999998764 678
Q ss_pred EEEEecCCCCCHHHHHhc
Q 039514 770 ALVLEYMSNGSLGDWLHS 787 (790)
Q Consensus 770 ~lv~e~~~~G~L~~~l~~ 787 (790)
++||||++ |+|.+++..
T Consensus 90 ~lv~e~~~-~~L~~~~~~ 106 (353)
T 2b9h_A 90 YIIQELMQ-TDLHRVIST 106 (353)
T ss_dssp EEEECCCS-EEHHHHHHH
T ss_pred EEEEeccC-ccHHHHHhh
Confidence 99999998 699998765
No 366
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=98.85 E-value=3.7e-09 Score=112.61 Aligned_cols=92 Identities=21% Similarity=0.265 Sum_probs=77.4
Q ss_pred HhcCccccceeccCCcEEEEEEE-EcCCcEEEEEEecccc-hHHHHHHHHHHHHHhcCCCCceeeEeeEEEeC-----Ce
Q 039514 696 ATDNFAENNIIGRGGFGSVYGAR-LEDGMKIAIKVFHQQC-ASALKSFEAECEVLKKIRHRNLIKVISSCSND-----DF 768 (790)
Q Consensus 696 ~~~~~~~~~~ig~g~~g~v~~~~-~~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~~~h~nlv~l~~~~~~~-----~~ 768 (790)
...+|...+.||+|+||.||+|. ..+++.||||.+.... ....+.+.+|++++.+++||||+++++++... ..
T Consensus 25 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 104 (364)
T 3qyz_A 25 VGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKD 104 (364)
T ss_dssp CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCC
T ss_pred ccccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccce
Confidence 34679999999999999999998 4578899999997543 33346789999999999999999999999764 46
Q ss_pred EEEEEecCCCCCHHHHHhcC
Q 039514 769 KALVLEYMSNGSLGDWLHSS 788 (790)
Q Consensus 769 ~~lv~e~~~~G~L~~~l~~~ 788 (790)
.|+||||++ |+|.++++..
T Consensus 105 ~~iv~e~~~-~~L~~~l~~~ 123 (364)
T 3qyz_A 105 VYIVQDLME-TDLYKLLKTQ 123 (364)
T ss_dssp EEEEEECCS-EEHHHHHHHC
T ss_pred EEEEEcccC-cCHHHHHHhC
Confidence 899999998 5999988653
No 367
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=98.85 E-value=3.5e-09 Score=110.03 Aligned_cols=92 Identities=26% Similarity=0.452 Sum_probs=71.9
Q ss_pred HhcCccccceeccCCcEEEEEEE-EcCCcEEEEEEecccch-----HHHHHHHHHHHHHhcC---CCCceeeEeeEEEeC
Q 039514 696 ATDNFAENNIIGRGGFGSVYGAR-LEDGMKIAIKVFHQQCA-----SALKSFEAECEVLKKI---RHRNLIKVISSCSND 766 (790)
Q Consensus 696 ~~~~~~~~~~ig~g~~g~v~~~~-~~~~~~vavK~~~~~~~-----~~~~~~~~e~~~l~~~---~h~nlv~l~~~~~~~ 766 (790)
..++|+..+.||+|+||.||+|. ..+++.||||.+..... .....+.+|+.++.++ +||||+++++++...
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~ 86 (308)
T 3g33_A 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATS 86 (308)
T ss_dssp ---CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEEC
T ss_pred cccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeecc
Confidence 35789999999999999999999 57789999999864321 1123456777776665 599999999999875
Q ss_pred C-----eEEEEEecCCCCCHHHHHhcC
Q 039514 767 D-----FKALVLEYMSNGSLGDWLHSS 788 (790)
Q Consensus 767 ~-----~~~lv~e~~~~G~L~~~l~~~ 788 (790)
. ..++||||++ |+|.++++..
T Consensus 87 ~~~~~~~~~lv~e~~~-~~L~~~~~~~ 112 (308)
T 3g33_A 87 RTDREIKVTLVFEHVD-QDLRTYLDKA 112 (308)
T ss_dssp CSSSEEEEEEEEECCC-CBHHHHHHTC
T ss_pred CCCCceeEEEEehhhh-cCHHHHHhhc
Confidence 5 5899999998 5999998764
No 368
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=98.84 E-value=3.6e-09 Score=110.82 Aligned_cols=91 Identities=24% Similarity=0.481 Sum_probs=75.1
Q ss_pred hcCccccceeccCCcEEEEEEE-EcCCcE----EEEEEecccc-hHHHHHHHHHHHHHhcCCCCceeeEeeEEEeCCeEE
Q 039514 697 TDNFAENNIIGRGGFGSVYGAR-LEDGMK----IAIKVFHQQC-ASALKSFEAECEVLKKIRHRNLIKVISSCSNDDFKA 770 (790)
Q Consensus 697 ~~~~~~~~~ig~g~~g~v~~~~-~~~~~~----vavK~~~~~~-~~~~~~~~~e~~~l~~~~h~nlv~l~~~~~~~~~~~ 770 (790)
..+|...+.||+|+||.||+|. ..+++. ||+|.+.... ....+.+.+|+.++.+++||||+++++++..+. .+
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~~ 92 (327)
T 3lzb_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQ 92 (327)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-EE
T ss_pred HhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-ce
Confidence 3678899999999999999999 445554 5777775432 234567899999999999999999999998765 78
Q ss_pred EEEecCCCCCHHHHHhcC
Q 039514 771 LVLEYMSNGSLGDWLHSS 788 (790)
Q Consensus 771 lv~e~~~~G~L~~~l~~~ 788 (790)
+|+||+++|+|.++++..
T Consensus 93 ~v~~~~~~g~L~~~l~~~ 110 (327)
T 3lzb_A 93 LITQLMPFGCLLDYVREH 110 (327)
T ss_dssp EEECCCSSCBHHHHHHHT
T ss_pred EEEEecCCCcHHHHHHhc
Confidence 999999999999999763
No 369
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=98.84 E-value=5.9e-10 Score=125.60 Aligned_cols=92 Identities=25% Similarity=0.442 Sum_probs=77.0
Q ss_pred hcCccccceeccCCcEEEEEEE-EcCCcEEEEEEeccc-chHHHHHHHHHHHHHhcCCCCceeeEeeEEEe------CCe
Q 039514 697 TDNFAENNIIGRGGFGSVYGAR-LEDGMKIAIKVFHQQ-CASALKSFEAECEVLKKIRHRNLIKVISSCSN------DDF 768 (790)
Q Consensus 697 ~~~~~~~~~ig~g~~g~v~~~~-~~~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~~~h~nlv~l~~~~~~------~~~ 768 (790)
.++|...+.||+|+||.||+|. ..+|+.||||.+... .....+.+.+|++++.+++|||||++++++.. ++.
T Consensus 13 ~grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~ 92 (676)
T 3qa8_A 13 CGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDL 92 (676)
T ss_dssp ----CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSS
T ss_pred CCCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCe
Confidence 3679999999999999999998 467899999998754 33445679999999999999999999999765 667
Q ss_pred EEEEEecCCCCCHHHHHhcC
Q 039514 769 KALVLEYMSNGSLGDWLHSS 788 (790)
Q Consensus 769 ~~lv~e~~~~G~L~~~l~~~ 788 (790)
.++||||+++|+|.++++..
T Consensus 93 ~~LVmEy~~ggsL~~~L~~~ 112 (676)
T 3qa8_A 93 PLLAMEYCEGGDLRKYLNQF 112 (676)
T ss_dssp CCCEEECCSSCBHHHHHHSS
T ss_pred EEEEEEeCCCCCHHHHHHhc
Confidence 89999999999999999763
No 370
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=98.84 E-value=3e-09 Score=109.43 Aligned_cols=89 Identities=26% Similarity=0.426 Sum_probs=68.3
Q ss_pred cCccccceeccCCcEEEEEEEEc--CCc--EEEEEEecccc---hHHHHHHHHHHHHHhcCCCCceeeEeeEEEeCCeEE
Q 039514 698 DNFAENNIIGRGGFGSVYGARLE--DGM--KIAIKVFHQQC---ASALKSFEAECEVLKKIRHRNLIKVISSCSNDDFKA 770 (790)
Q Consensus 698 ~~~~~~~~ig~g~~g~v~~~~~~--~~~--~vavK~~~~~~---~~~~~~~~~e~~~l~~~~h~nlv~l~~~~~~~~~~~ 770 (790)
++|...+.||+|+||.||+|... +++ .||||.++... ....+.+.+|++++.+++||||+++++++..+. .+
T Consensus 18 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~ 96 (291)
T 1u46_A 18 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-MK 96 (291)
T ss_dssp GGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-CE
T ss_pred hHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-ce
Confidence 56888999999999999999843 333 68999987542 234567899999999999999999999998765 88
Q ss_pred EEEecCCCCCHHHHHhc
Q 039514 771 LVLEYMSNGSLGDWLHS 787 (790)
Q Consensus 771 lv~e~~~~G~L~~~l~~ 787 (790)
+||||+++|+|.+++..
T Consensus 97 ~v~e~~~~~~L~~~l~~ 113 (291)
T 1u46_A 97 MVTELAPLGSLLDRLRK 113 (291)
T ss_dssp EEEECCTTCBHHHHHHH
T ss_pred eeEecccCCCHHHHHHh
Confidence 99999999999999875
No 371
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=98.84 E-value=4.6e-09 Score=108.45 Aligned_cols=89 Identities=20% Similarity=0.296 Sum_probs=77.3
Q ss_pred hcCccccceeccCCcEEEEEEE-EcCCcEEEEEEecccchHHHHHHHHHHHHHhcC-CCCceeeEeeEEEeCCeEEEEEe
Q 039514 697 TDNFAENNIIGRGGFGSVYGAR-LEDGMKIAIKVFHQQCASALKSFEAECEVLKKI-RHRNLIKVISSCSNDDFKALVLE 774 (790)
Q Consensus 697 ~~~~~~~~~ig~g~~g~v~~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~~-~h~nlv~l~~~~~~~~~~~lv~e 774 (790)
.++|...+.||+|+||.||+|. ..+++.||||.+..... .+.+.+|+..+.++ +|++++++++++..+...++|||
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e 86 (298)
T 1csn_A 9 GVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSD--APQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVID 86 (298)
T ss_dssp TTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCTT--SCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEE
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCCc--cHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEEE
Confidence 3568899999999999999999 57799999999865422 24577899999999 79999999999999999999999
Q ss_pred cCCCCCHHHHHhcC
Q 039514 775 YMSNGSLGDWLHSS 788 (790)
Q Consensus 775 ~~~~G~L~~~l~~~ 788 (790)
|+ +|+|.++++..
T Consensus 87 ~~-~~~L~~~l~~~ 99 (298)
T 1csn_A 87 LL-GPSLEDLLDLC 99 (298)
T ss_dssp CC-CCBHHHHHHHT
T ss_pred ec-CCCHHHHHHHh
Confidence 99 99999999853
No 372
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=98.83 E-value=1e-09 Score=114.29 Aligned_cols=94 Identities=24% Similarity=0.429 Sum_probs=70.6
Q ss_pred HHhcCccccceeccCCcEEEEEEE-EcCCcEEEEEEecccchH------HHHHHHHHHHHHhcC----CCCceeeEeeEE
Q 039514 695 QATDNFAENNIIGRGGFGSVYGAR-LEDGMKIAIKVFHQQCAS------ALKSFEAECEVLKKI----RHRNLIKVISSC 763 (790)
Q Consensus 695 ~~~~~~~~~~~ig~g~~g~v~~~~-~~~~~~vavK~~~~~~~~------~~~~~~~e~~~l~~~----~h~nlv~l~~~~ 763 (790)
...++|...+.||+|+||.||+|. ..+++.||||.+...... ....+.+|+.++.++ +||||+++++++
T Consensus 28 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~~ 107 (312)
T 2iwi_A 28 AFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWF 107 (312)
T ss_dssp -----CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEEC
T ss_pred hhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEEE
Confidence 345779999999999999999998 567899999999654321 123356788888888 899999999999
Q ss_pred EeCCeEEEEEec-CCCCCHHHHHhcC
Q 039514 764 SNDDFKALVLEY-MSNGSLGDWLHSS 788 (790)
Q Consensus 764 ~~~~~~~lv~e~-~~~G~L~~~l~~~ 788 (790)
...+..++|+|| +++|+|.+++...
T Consensus 108 ~~~~~~~~v~e~~~~~~~L~~~l~~~ 133 (312)
T 2iwi_A 108 ETQEGFMLVLERPLPAQDLFDYITEK 133 (312)
T ss_dssp -----CEEEEECCSSEEEHHHHHHHH
T ss_pred ecCCeEEEEEEecCCCCCHHHHHHhc
Confidence 999999999999 8999999998753
No 373
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=98.83 E-value=4.9e-09 Score=114.40 Aligned_cols=87 Identities=24% Similarity=0.272 Sum_probs=73.7
Q ss_pred cCccccceeccCCcEEEEEEEEcCCcEEEEEEecccchHHHHHHHHHHHHHhcC-CCCceeeEeeEEEeCCeEEEEEecC
Q 039514 698 DNFAENNIIGRGGFGSVYGARLEDGMKIAIKVFHQQCASALKSFEAECEVLKKI-RHRNLIKVISSCSNDDFKALVLEYM 776 (790)
Q Consensus 698 ~~~~~~~~ig~g~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~~-~h~nlv~l~~~~~~~~~~~lv~e~~ 776 (790)
+.|...++||+|+||.||.+...+|+.||||++.... .+.+.+|++++.++ +|||||++++++.+++..|+|||||
T Consensus 15 ~~~~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~~---~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~ 91 (434)
T 2rio_A 15 NLVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDF---CDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELC 91 (434)
T ss_dssp SCEEEEEEEEECSTTCEEEEEESSSSEEEEEEEEGGG---HHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCC
T ss_pred heeeccCeEeeCCCeEEEEEEEECCeEEEEEEEcHHH---HHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecC
Confidence 3455568899999999987767789999999987543 34577899999876 8999999999999999999999999
Q ss_pred CCCCHHHHHhcC
Q 039514 777 SNGSLGDWLHSS 788 (790)
Q Consensus 777 ~~G~L~~~l~~~ 788 (790)
+ |+|.+++...
T Consensus 92 ~-gsL~~~l~~~ 102 (434)
T 2rio_A 92 N-LNLQDLVESK 102 (434)
T ss_dssp S-EEHHHHHHTC
T ss_pred C-CCHHHHHhcc
Confidence 6 6999999764
No 374
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=98.82 E-value=3.9e-09 Score=112.71 Aligned_cols=89 Identities=25% Similarity=0.362 Sum_probs=75.6
Q ss_pred hcCccccceeccCCcEEEEEEE-EcCCcEEEEEEecccc--hHHHHHHHHHHHHHhcCCCCceeeEeeEEEeCCeE----
Q 039514 697 TDNFAENNIIGRGGFGSVYGAR-LEDGMKIAIKVFHQQC--ASALKSFEAECEVLKKIRHRNLIKVISSCSNDDFK---- 769 (790)
Q Consensus 697 ~~~~~~~~~ig~g~~g~v~~~~-~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~~~h~nlv~l~~~~~~~~~~---- 769 (790)
.++|...+.||+|+||.||+|. ..+|+.||||.+.... ....+.+.+|+.++++++||||+++++++...+..
T Consensus 41 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 120 (371)
T 4exu_A 41 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY 120 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCC
T ss_pred cccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccce
Confidence 4678899999999999999998 5678999999997532 33356788999999999999999999999876654
Q ss_pred --EEEEecCCCCCHHHHHh
Q 039514 770 --ALVLEYMSNGSLGDWLH 786 (790)
Q Consensus 770 --~lv~e~~~~G~L~~~l~ 786 (790)
++||||++ |+|.+++.
T Consensus 121 ~~~lv~e~~~-~~l~~~~~ 138 (371)
T 4exu_A 121 DFYLVMPFMQ-TDLQKIMG 138 (371)
T ss_dssp CCEEEEECCC-EEHHHHTT
T ss_pred eEEEEEcccc-ccHHHHhh
Confidence 99999998 68888764
No 375
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=98.82 E-value=6.3e-09 Score=108.33 Aligned_cols=92 Identities=24% Similarity=0.356 Sum_probs=79.3
Q ss_pred HhcCccccceeccCCcEEEEEEEEcCCcEEEEEEeccc--chHHHHHHHHHHHHHhcCC--CCceeeEeeEEEeCCeEEE
Q 039514 696 ATDNFAENNIIGRGGFGSVYGARLEDGMKIAIKVFHQQ--CASALKSFEAECEVLKKIR--HRNLIKVISSCSNDDFKAL 771 (790)
Q Consensus 696 ~~~~~~~~~~ig~g~~g~v~~~~~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~~~--h~nlv~l~~~~~~~~~~~l 771 (790)
..++|...+.||+|+||.||++...+++.||||.+... .....+.+.+|++++.+++ ||||+++++++..++..++
T Consensus 26 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~l 105 (313)
T 3cek_A 26 KGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYM 105 (313)
T ss_dssp TTEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSEEEE
T ss_pred ccceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecCCEEEE
Confidence 34668899999999999999999777999999999653 2344567899999999997 5999999999999999999
Q ss_pred EEecCCCCCHHHHHhcC
Q 039514 772 VLEYMSNGSLGDWLHSS 788 (790)
Q Consensus 772 v~e~~~~G~L~~~l~~~ 788 (790)
||| +.+|+|.+++...
T Consensus 106 v~e-~~~~~L~~~l~~~ 121 (313)
T 3cek_A 106 VME-CGNIDLNSWLKKK 121 (313)
T ss_dssp EEC-CCSEEHHHHHHHC
T ss_pred EEe-cCCCcHHHHHHhc
Confidence 999 6678999998764
No 376
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=98.82 E-value=3.5e-09 Score=112.23 Aligned_cols=90 Identities=24% Similarity=0.447 Sum_probs=74.5
Q ss_pred hcCccccceeccCCcEEEEEEEE-cCCcEEEEEEecccch--HHHHHHHHHHHHHhcCCCCceeeEeeEEEe--------
Q 039514 697 TDNFAENNIIGRGGFGSVYGARL-EDGMKIAIKVFHQQCA--SALKSFEAECEVLKKIRHRNLIKVISSCSN-------- 765 (790)
Q Consensus 697 ~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~~~h~nlv~l~~~~~~-------- 765 (790)
..+|...+.||+|+||.||+|.. .+|+.||||++..... .....+.+|+.++.+++||||+++++++..
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 95 (351)
T 3mi9_A 16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRC 95 (351)
T ss_dssp GGGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC-------
T ss_pred ccceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccC
Confidence 36788999999999999999994 6789999999865332 223567899999999999999999999987
Q ss_pred CCeEEEEEecCCCCCHHHHHhc
Q 039514 766 DDFKALVLEYMSNGSLGDWLHS 787 (790)
Q Consensus 766 ~~~~~lv~e~~~~G~L~~~l~~ 787 (790)
.+..++||||+++ ++.+.+..
T Consensus 96 ~~~~~lv~e~~~~-~l~~~l~~ 116 (351)
T 3mi9_A 96 KGSIYLVFDFCEH-DLAGLLSN 116 (351)
T ss_dssp -CEEEEEEECCSE-EHHHHHHC
T ss_pred CceEEEEEeccCC-CHHHHHhh
Confidence 3468999999985 78777765
No 377
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=98.81 E-value=2.1e-09 Score=114.35 Aligned_cols=90 Identities=22% Similarity=0.389 Sum_probs=68.9
Q ss_pred hcCccccceeccCCcEEEEEEE-EcCCcEEEEEEeccc--chHHHHHHHHHHHHHhcCCCCceeeEeeEEEeC------C
Q 039514 697 TDNFAENNIIGRGGFGSVYGAR-LEDGMKIAIKVFHQQ--CASALKSFEAECEVLKKIRHRNLIKVISSCSND------D 767 (790)
Q Consensus 697 ~~~~~~~~~ig~g~~g~v~~~~-~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~~~h~nlv~l~~~~~~~------~ 767 (790)
.++|...+.||+|+||.||+|. ..+|+.||||++... .....+.+.+|+++++.++||||+++++++... .
T Consensus 28 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~ 107 (367)
T 2fst_X 28 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFN 107 (367)
T ss_dssp ETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred CCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCC
Confidence 4779999999999999999998 567899999999653 233456788999999999999999999998754 5
Q ss_pred eEEEEEecCCCCCHHHHHhc
Q 039514 768 FKALVLEYMSNGSLGDWLHS 787 (790)
Q Consensus 768 ~~~lv~e~~~~G~L~~~l~~ 787 (790)
..|+|+||+ +|+|.++++.
T Consensus 108 ~~~lv~e~~-~~~L~~~~~~ 126 (367)
T 2fst_X 108 DVYLVTHLM-GADLNNIVKC 126 (367)
T ss_dssp CCEEEEECC-CEECC-----
T ss_pred eEEEEeccc-CCCHHHHHhc
Confidence 679999999 6799888764
No 378
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=98.80 E-value=8.4e-09 Score=108.49 Aligned_cols=89 Identities=18% Similarity=0.260 Sum_probs=69.4
Q ss_pred HhcCcccc-ceeccCCcEEEEEEEE-cCCcEEEEEEecccchHHHHHHHHHHHHHhcCCCCceeeEeeEEEe----CCeE
Q 039514 696 ATDNFAEN-NIIGRGGFGSVYGARL-EDGMKIAIKVFHQQCASALKSFEAECEVLKKIRHRNLIKVISSCSN----DDFK 769 (790)
Q Consensus 696 ~~~~~~~~-~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~~~h~nlv~l~~~~~~----~~~~ 769 (790)
..++|... ++||+|+||.||+|.. .+++.||||++..... ..++ ....+....||||+++++++.. +...
T Consensus 26 ~~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~e---~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~ 101 (336)
T 3fhr_A 26 VTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSPK-ARQE---VDHHWQASGGPHIVCILDVYENMHHGKRCL 101 (336)
T ss_dssp GGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESSHH-HHHH---HHHHHHHTTSTTBCCEEEEEEEEETTEEEE
T ss_pred ccceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCcHH-HHHH---HHHHHHhcCCCChHHHHHHHhhccCCCceE
Confidence 34678884 5799999999999994 5789999999975422 1122 2233566789999999999876 4568
Q ss_pred EEEEecCCCCCHHHHHhcC
Q 039514 770 ALVLEYMSNGSLGDWLHSS 788 (790)
Q Consensus 770 ~lv~e~~~~G~L~~~l~~~ 788 (790)
++||||+++|+|.+++...
T Consensus 102 ~lv~e~~~gg~L~~~l~~~ 120 (336)
T 3fhr_A 102 LIIMECMEGGELFSRIQER 120 (336)
T ss_dssp EEEEECCTTEEHHHHHHTC
T ss_pred EEEEeccCCCCHHHHHHhc
Confidence 9999999999999999764
No 379
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=98.78 E-value=4.4e-09 Score=111.54 Aligned_cols=89 Identities=25% Similarity=0.357 Sum_probs=74.4
Q ss_pred hcCccccceeccCCcEEEEEEE-EcCCcEEEEEEecccc--hHHHHHHHHHHHHHhcCCCCceeeEeeEEEeCCe-----
Q 039514 697 TDNFAENNIIGRGGFGSVYGAR-LEDGMKIAIKVFHQQC--ASALKSFEAECEVLKKIRHRNLIKVISSCSNDDF----- 768 (790)
Q Consensus 697 ~~~~~~~~~ig~g~~g~v~~~~-~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~~~h~nlv~l~~~~~~~~~----- 768 (790)
.++|...+.||+|+||.||+|. ..+|+.||||.+.... ....+.+.+|+.++.+++||||+++++++...+.
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 102 (353)
T 3coi_A 23 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY 102 (353)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred CceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccce
Confidence 3678889999999999999999 4679999999996532 3335678899999999999999999999987654
Q ss_pred -EEEEEecCCCCCHHHHHh
Q 039514 769 -KALVLEYMSNGSLGDWLH 786 (790)
Q Consensus 769 -~~lv~e~~~~G~L~~~l~ 786 (790)
.++||||++ |+|.+++.
T Consensus 103 ~~~lv~e~~~-~~l~~~~~ 120 (353)
T 3coi_A 103 DFYLVMPFMQ-TDLQKIMG 120 (353)
T ss_dssp CCEEEEECCS-EEGGGTTT
T ss_pred eEEEEecccc-CCHHHHhc
Confidence 499999998 58877654
No 380
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.78 E-value=3.5e-10 Score=112.62 Aligned_cols=153 Identities=22% Similarity=0.271 Sum_probs=91.0
Q ss_pred CCCCccccccCCCCCcEEEEECCC---CCcceecc-ccCCCC---------CCCCEEECCCCCCcccCChhhhCCCCCCE
Q 039514 39 SVCTWIGITCDVNSHRVTALDTSQ---FNLQGTIP-SQLGNL---------SSLTILNLSHNKLSGSVPSSIYTMHTLKF 105 (790)
Q Consensus 39 ~~c~w~gv~c~~~~~~v~~Ldl~~---~~l~~~~~-~~~~~l---------~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~ 105 (790)
..|.|.|+.|+..+.+|+.+.... ..+.+.++ +.+..+ ..-+.|||+. |...+.|+.
T Consensus 76 ~l~~~~g~i~~~~~~ki~~~v~~~~~~~~~~~~l~~~~~~~Lk~~l~~ryn~~~~~LdLs~----------l~~dp~L~~ 145 (267)
T 3rw6_A 76 ALKAVNYKILDRENRRISIIINSSAPPHTILNELKPEQVEQLKLIMSKRYDGSQQALDLKG----------LRSDPDLVA 145 (267)
T ss_dssp HHHHTTSSCBCTTSCBCCCEEEECCCCHHHHTSCCHHHHHHHHHHHHHTEETTTTEEECTT----------GGGCHHHHH
T ss_pred HHHhcCcEEECCCCCEEEEEEecCCCcccccccCCHHHHHHHHHHHHhccchhccccCHHH----------cCCCcchhh
Confidence 368999999997655665543322 12222222 111111 1234455543 334444444
Q ss_pred --EeCCCCCCc---ccCCccccCCCCCcEEEccCccCcc--cCchhhhccCCCCCEEECCCCcCcccCCcCCCCCC--CC
Q 039514 106 --LDFTDNQLS---GSVSSFVFNMSSIVDIRLTNNRLSG--ELPKNICNYLPHLKALFLDKNMFHGKIPSALSKCK--QL 176 (790)
Q Consensus 106 --L~Ls~n~l~---~~~~~~~~~l~~L~~L~L~~N~l~~--~lp~~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~--~L 176 (790)
++++.|+.. +..+....++++|+.|+|++|+|++ .+|. .+..+++|++|+|++|.|++. ..+..+. +|
T Consensus 146 ~~l~l~~N~~~~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~-~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L 222 (267)
T 3rw6_A 146 QNIDVVLNRRSCMAATLRIIEENIPELLSLNLSNNRLYRLDDMSS-IVQKAPNLKILNLSGNELKSE--RELDKIKGLKL 222 (267)
T ss_dssp TTCCCCTTSHHHHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTT-HHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCC
T ss_pred cCccccCCHHHHHHHHHHHHHhhCCCCCEEECCCCCCCCCccchh-HHhhCCCCCEEECCCCccCCc--hhhhhcccCCc
Confidence 566666433 2222333567778888888888874 3333 336688888888888888865 2334444 88
Q ss_pred CeeecccCcccccCc-------ccccccCCCCcee
Q 039514 177 QQLNLQLNNLSGAIP-------KEIGNLTMLKGIS 204 (790)
Q Consensus 177 ~~L~L~~N~l~~~~~-------~~~~~l~~L~~L~ 204 (790)
++|+|++|.+.+..| ..+..+++|+.||
T Consensus 223 ~~L~L~~Npl~~~~~~~~~y~~~il~~~P~L~~LD 257 (267)
T 3rw6_A 223 EELWLDGNSLCDTFRDQSTYISAIRERFPKLLRLD 257 (267)
T ss_dssp SEEECTTSTTGGGCSSHHHHHHHHHHHCTTCCEES
T ss_pred ceEEccCCcCccccCcchhHHHHHHHHCcccCeEC
Confidence 899999998876554 2467788888765
No 381
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=98.77 E-value=5.3e-09 Score=113.81 Aligned_cols=87 Identities=18% Similarity=0.422 Sum_probs=73.7
Q ss_pred cCccccceeccCCcEEEEEEEEcCCcEEEEEEecccchHHHHHHHHHHHHHhcC-CCCceeeEeeEEEeCCeEEEEEecC
Q 039514 698 DNFAENNIIGRGGFGSVYGARLEDGMKIAIKVFHQQCASALKSFEAECEVLKKI-RHRNLIKVISSCSNDDFKALVLEYM 776 (790)
Q Consensus 698 ~~~~~~~~ig~g~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~~-~h~nlv~l~~~~~~~~~~~lv~e~~ 776 (790)
.+|...++||+|+||.||.....+++.||||++..... ..+.+|+.++.++ +|||||++++++.+.+..|+|||||
T Consensus 24 ~~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~---~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E~~ 100 (432)
T 3p23_A 24 ISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECF---SFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELC 100 (432)
T ss_dssp EEEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTTE---EECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred EEEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHHH---HHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEECC
Confidence 45888899999999997765567899999999965432 1245799999999 7999999999999999999999999
Q ss_pred CCCCHHHHHhcC
Q 039514 777 SNGSLGDWLHSS 788 (790)
Q Consensus 777 ~~G~L~~~l~~~ 788 (790)
+ |+|.+++...
T Consensus 101 ~-g~L~~~l~~~ 111 (432)
T 3p23_A 101 A-ATLQEYVEQK 111 (432)
T ss_dssp S-EEHHHHHHSS
T ss_pred C-CCHHHHHHhc
Confidence 7 6999998764
No 382
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=98.77 E-value=6.7e-09 Score=108.82 Aligned_cols=92 Identities=26% Similarity=0.427 Sum_probs=73.2
Q ss_pred HhcCccccceeccCCcEEEEEEEE--cCCcEEEEEEecccchH--HHHHHHHHHHHHhcC---CCCceeeEeeEEE----
Q 039514 696 ATDNFAENNIIGRGGFGSVYGARL--EDGMKIAIKVFHQQCAS--ALKSFEAECEVLKKI---RHRNLIKVISSCS---- 764 (790)
Q Consensus 696 ~~~~~~~~~~ig~g~~g~v~~~~~--~~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~~---~h~nlv~l~~~~~---- 764 (790)
+.++|...+.||+|+||.||+|.. .+|+.||||.+...... ....+.+|+.++..+ +||||+++++++.
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~ 88 (326)
T 1blx_A 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRT 88 (326)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEEC
T ss_pred chhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeeccc
Confidence 457899999999999999999995 46889999999654321 123455677766655 8999999999987
Q ss_pred -eCCeEEEEEecCCCCCHHHHHhcC
Q 039514 765 -NDDFKALVLEYMSNGSLGDWLHSS 788 (790)
Q Consensus 765 -~~~~~~lv~e~~~~G~L~~~l~~~ 788 (790)
.....++||||++ |+|.+++...
T Consensus 89 ~~~~~~~lv~e~~~-~~L~~~l~~~ 112 (326)
T 1blx_A 89 DRETKLTLVFEHVD-QDLTTYLDKV 112 (326)
T ss_dssp SSEEEEEEEEECCS-CBHHHHHHHS
T ss_pred CCCceEEEEEecCC-CCHHHHHHhc
Confidence 4567899999998 6999998763
No 383
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=98.77 E-value=1.6e-08 Score=110.03 Aligned_cols=90 Identities=18% Similarity=0.320 Sum_probs=75.0
Q ss_pred hcCccccceeccCCcEEEEEEE-EcCCcEEEEEEecccchHHHHHHHHHHHHHhcC------CCCceeeEeeEEEeCCeE
Q 039514 697 TDNFAENNIIGRGGFGSVYGAR-LEDGMKIAIKVFHQQCASALKSFEAECEVLKKI------RHRNLIKVISSCSNDDFK 769 (790)
Q Consensus 697 ~~~~~~~~~ig~g~~g~v~~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~~------~h~nlv~l~~~~~~~~~~ 769 (790)
..+|+..+.||+|+||.||+|. ..+++.||||++.... ...+++.+|++++..+ .|+||+++++++...+..
T Consensus 96 ~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~ 174 (429)
T 3kvw_A 96 AYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEK-RFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHI 174 (429)
T ss_dssp TTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTEE
T ss_pred cCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCcc-chHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCeE
Confidence 4568999999999999999998 5568999999997643 2335567777777665 678999999999999999
Q ss_pred EEEEecCCCCCHHHHHhcC
Q 039514 770 ALVLEYMSNGSLGDWLHSS 788 (790)
Q Consensus 770 ~lv~e~~~~G~L~~~l~~~ 788 (790)
++||||++ |+|.+++...
T Consensus 175 ~lv~e~~~-~~L~~~l~~~ 192 (429)
T 3kvw_A 175 CMTFELLS-MNLYELIKKN 192 (429)
T ss_dssp EEEECCCC-CBHHHHHHHT
T ss_pred EEEEeccC-CCHHHHHHhc
Confidence 99999997 6999998764
No 384
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=98.76 E-value=3.6e-09 Score=112.18 Aligned_cols=85 Identities=18% Similarity=0.219 Sum_probs=71.3
Q ss_pred cCccccceeccCCcEEEEEEEEc---------CCcEEEEEEecccchHHHHHHHHHHHHHhcCCCCceee----------
Q 039514 698 DNFAENNIIGRGGFGSVYGARLE---------DGMKIAIKVFHQQCASALKSFEAECEVLKKIRHRNLIK---------- 758 (790)
Q Consensus 698 ~~~~~~~~ig~g~~g~v~~~~~~---------~~~~vavK~~~~~~~~~~~~~~~e~~~l~~~~h~nlv~---------- 758 (790)
++|...+.||+|+||.||+|... +++.||||.+... +.+.+|++++.+++|||||+
T Consensus 42 ~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 116 (352)
T 2jii_A 42 RQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-----GRLFNEQNFFQRAAKPLQVNKWKKLYSTPL 116 (352)
T ss_dssp CEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT-----STHHHHHHHHHHHCCHHHHHHHHHHTTCTT
T ss_pred CeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-----chHHHHHHHHHHhcccchhhhhhhhccCCc
Confidence 67889999999999999999954 3789999999754 34778999999999999987
Q ss_pred -----EeeEEEe-CCeEEEEEecCCCCCHHHHHhcC
Q 039514 759 -----VISSCSN-DDFKALVLEYMSNGSLGDWLHSS 788 (790)
Q Consensus 759 -----l~~~~~~-~~~~~lv~e~~~~G~L~~~l~~~ 788 (790)
+++++.. ++..++||||+ +|+|.+++...
T Consensus 117 ~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~ 151 (352)
T 2jii_A 117 LAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVS 151 (352)
T ss_dssp CSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHS
T ss_pred cCccchhhccccCCcEEEEEecCC-CcCHHHHHHhC
Confidence 6777776 78899999999 99999999763
No 385
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=98.75 E-value=6e-09 Score=110.12 Aligned_cols=90 Identities=20% Similarity=0.213 Sum_probs=68.8
Q ss_pred cCccccceeccCCcEEEEEEEEc----CCcEEEEEEecccchH-----------HHHHHHHHHHHHhcCCCCceeeEeeE
Q 039514 698 DNFAENNIIGRGGFGSVYGARLE----DGMKIAIKVFHQQCAS-----------ALKSFEAECEVLKKIRHRNLIKVISS 762 (790)
Q Consensus 698 ~~~~~~~~ig~g~~g~v~~~~~~----~~~~vavK~~~~~~~~-----------~~~~~~~e~~~l~~~~h~nlv~l~~~ 762 (790)
++|...+.||+|+||.||+|... +++.||||.+...... ....+.+|+..+..++||||++++++
T Consensus 37 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~~ 116 (345)
T 2v62_A 37 NQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGS 116 (345)
T ss_dssp CEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEEE
T ss_pred ceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeecc
Confidence 56889999999999999999954 5788999998754311 11246788899999999999999999
Q ss_pred EEe----CCeEEEEEecCCCCCHHHHHhcC
Q 039514 763 CSN----DDFKALVLEYMSNGSLGDWLHSS 788 (790)
Q Consensus 763 ~~~----~~~~~lv~e~~~~G~L~~~l~~~ 788 (790)
+.. ....|+||||+ +|+|.+++...
T Consensus 117 ~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~ 145 (345)
T 2v62_A 117 GLTEFKGRSYRFMVMERL-GIDLQKISGQN 145 (345)
T ss_dssp EEEESSSCEEEEEEEECE-EEEHHHHCBGG
T ss_pred cccccCCCcEEEEEEecc-CCCHHHHHHhc
Confidence 988 77899999999 99999998653
No 386
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=98.74 E-value=1.1e-08 Score=108.94 Aligned_cols=91 Identities=16% Similarity=0.256 Sum_probs=71.8
Q ss_pred hcCccccceeccCCcEEEEEEEEcC------CcEEEEEEecccchHH-----------HHHHHHHHHHHhcCCCCceeeE
Q 039514 697 TDNFAENNIIGRGGFGSVYGARLED------GMKIAIKVFHQQCASA-----------LKSFEAECEVLKKIRHRNLIKV 759 (790)
Q Consensus 697 ~~~~~~~~~ig~g~~g~v~~~~~~~------~~~vavK~~~~~~~~~-----------~~~~~~e~~~l~~~~h~nlv~l 759 (790)
.++|...+.||+|+||.||+|.... ++.||||.+....... ...+..|+..+..++||||+++
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~ 113 (364)
T 3op5_A 34 AAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKY 113 (364)
T ss_dssp CCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCE
T ss_pred CCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeE
Confidence 4579999999999999999998643 4789999987543211 1234566777888999999999
Q ss_pred eeEEEeC----CeEEEEEecCCCCCHHHHHhcC
Q 039514 760 ISSCSND----DFKALVLEYMSNGSLGDWLHSS 788 (790)
Q Consensus 760 ~~~~~~~----~~~~lv~e~~~~G~L~~~l~~~ 788 (790)
++++... ...++||||+ +|+|.++++..
T Consensus 114 ~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~ 145 (364)
T 3op5_A 114 WGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEAN 145 (364)
T ss_dssp EEEEEEEETTEEEEEEEEECE-EEEHHHHHHHT
T ss_pred EeeeeeccCCcceEEEEEeCC-CCCHHHHHHhc
Confidence 9998764 4589999999 99999998764
No 387
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=98.74 E-value=1.2e-08 Score=110.16 Aligned_cols=90 Identities=19% Similarity=0.333 Sum_probs=74.0
Q ss_pred hcCccccceeccCCcEEEEEEE-EcCCcEEEEEEecccchHHHHHHHHHHHHHhcCC--------CCceeeEeeEEE---
Q 039514 697 TDNFAENNIIGRGGFGSVYGAR-LEDGMKIAIKVFHQQCASALKSFEAECEVLKKIR--------HRNLIKVISSCS--- 764 (790)
Q Consensus 697 ~~~~~~~~~ig~g~~g~v~~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~~~--------h~nlv~l~~~~~--- 764 (790)
.++|...+.||+|+||.||+|. ..+++.||||.+.... ...+.+.+|++++.+++ |+||+++++++.
T Consensus 36 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~ 114 (397)
T 1wak_A 36 NGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAE-HYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISG 114 (397)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEE
T ss_pred CCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecCC-cchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecC
Confidence 3679999999999999999998 5678999999997542 33466889999998885 888999999987
Q ss_pred -eCCeEEEEEecCCCCCHHHHHhcC
Q 039514 765 -NDDFKALVLEYMSNGSLGDWLHSS 788 (790)
Q Consensus 765 -~~~~~~lv~e~~~~G~L~~~l~~~ 788 (790)
.+...++||||+ +|++.+++...
T Consensus 115 ~~~~~~~lv~e~~-~~~l~~~~~~~ 138 (397)
T 1wak_A 115 VNGTHICMVFEVL-GHHLLKWIIKS 138 (397)
T ss_dssp TTEEEEEEEECCC-CCBHHHHHHHT
T ss_pred CCCceEEEEEecc-CccHHHHHHhc
Confidence 456789999999 56777776543
No 388
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=98.73 E-value=8.7e-09 Score=111.49 Aligned_cols=84 Identities=25% Similarity=0.373 Sum_probs=64.7
Q ss_pred ccc-cceeccCCcEEEEEEEEc---CCcEEEEEEecccchHHHHHHHHHHHHHhcCCCCceeeEeeEEEe--CCeEEEEE
Q 039514 700 FAE-NNIIGRGGFGSVYGARLE---DGMKIAIKVFHQQCASALKSFEAECEVLKKIRHRNLIKVISSCSN--DDFKALVL 773 (790)
Q Consensus 700 ~~~-~~~ig~g~~g~v~~~~~~---~~~~vavK~~~~~~~~~~~~~~~e~~~l~~~~h~nlv~l~~~~~~--~~~~~lv~ 773 (790)
|.. .++||+|+||.||+|... +++.||||.+..... ...+.+|+.++++++|||||++++++.. +...++||
T Consensus 22 y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~--~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~lv~ 99 (405)
T 3rgf_A 22 FEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGI--SMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLF 99 (405)
T ss_dssp EECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSSC--CHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEEEE
T ss_pred hhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCC--CHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEEEE
Confidence 444 458999999999999954 578999999975432 2457899999999999999999999955 67899999
Q ss_pred ecCCCCCHHHHHh
Q 039514 774 EYMSNGSLGDWLH 786 (790)
Q Consensus 774 e~~~~G~L~~~l~ 786 (790)
||+++ +|.+++.
T Consensus 100 e~~~~-~l~~~~~ 111 (405)
T 3rgf_A 100 DYAEH-DLWHIIK 111 (405)
T ss_dssp ECCSE-EHHHHHH
T ss_pred eCCCC-CHHHHHH
Confidence 99974 8888775
No 389
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.73 E-value=4.9e-09 Score=110.26 Aligned_cols=83 Identities=17% Similarity=0.229 Sum_probs=42.2
Q ss_pred cccCceEeCcCCcccccCcccc---cCCcccCeeeCCCCcccccC----CccccCCCCCCEEECCCCcCcccCCccccc-
Q 039514 503 LKVLLGINLSENNLSGDMPATI---GGLKDLQFMDLAYNRLEGPI----PESFGDLTSLEVLNLSKNKISGSIPKSMEK- 574 (790)
Q Consensus 503 l~~L~~L~Ls~N~l~~~~~~~~---~~l~~L~~L~Ls~N~l~~~~----p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~- 574 (790)
+++|+.|+|++|.+....+..+ ..+++|++|+|+.|.+.+.. +..+..+++|+.|+|++|.++...-..+..
T Consensus 251 ~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~d~~~~~l~~a 330 (362)
T 2ra8_A 251 FPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLSDEMKKELQKS 330 (362)
T ss_dssp CTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCCHHHHHHHHHH
T ss_pred CCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCCHHHHHHHHHH
Confidence 5566666666666653222222 13556666666666665432 222234466666666666665432222222
Q ss_pred cCCCCeEeCCCCc
Q 039514 575 LFYLRELNLSFNE 587 (790)
Q Consensus 575 l~~L~~L~Ls~N~ 587 (790)
+ ...++++.|+
T Consensus 331 l--g~~~~~~~~~ 341 (362)
T 2ra8_A 331 L--PMKIDVSDSQ 341 (362)
T ss_dssp C--CSEEECCSBC
T ss_pred c--CCEEEecCCc
Confidence 1 2445666554
No 390
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=98.72 E-value=1.5e-08 Score=108.16 Aligned_cols=89 Identities=16% Similarity=0.104 Sum_probs=60.8
Q ss_pred hcCccccceeccCCcEEEEEEE-EcCCcEEEEEEecccch---HHHHHHHHHH---HHHhcCCCCceeeEe-------eE
Q 039514 697 TDNFAENNIIGRGGFGSVYGAR-LEDGMKIAIKVFHQQCA---SALKSFEAEC---EVLKKIRHRNLIKVI-------SS 762 (790)
Q Consensus 697 ~~~~~~~~~ig~g~~g~v~~~~-~~~~~~vavK~~~~~~~---~~~~~~~~e~---~~l~~~~h~nlv~l~-------~~ 762 (790)
...|...+.||+|+||.||+|. ..+|+.||||++..... ...+.+.+|+ ..+++ +||||++++ ++
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~-~hp~iv~~~~~~~~p~d~ 139 (371)
T 3q60_A 61 ERKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLG-ESPEEARDRRRLLLPSDA 139 (371)
T ss_dssp EEEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC-----------CBCCCCEE
T ss_pred ceeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcc-cChhhhhhceeEEeeehh
Confidence 3458889999999999999999 45789999999986432 2345577774 55556 799988755 34
Q ss_pred EEeC-----------------CeEEEEEecCCCCCHHHHHhc
Q 039514 763 CSND-----------------DFKALVLEYMSNGSLGDWLHS 787 (790)
Q Consensus 763 ~~~~-----------------~~~~lv~e~~~~G~L~~~l~~ 787 (790)
+... ...|+|||||+ |+|.++++.
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~ 180 (371)
T 3q60_A 140 VAVQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFST 180 (371)
T ss_dssp EEETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHH
T ss_pred eecCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHH
Confidence 4332 33799999999 899999975
No 391
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=98.71 E-value=1.7e-08 Score=106.24 Aligned_cols=90 Identities=17% Similarity=0.315 Sum_probs=75.9
Q ss_pred hcCccccceeccCCcEEEEEEEE--cCCcEEEEEEecccchHHHHHHHHHHHHHhcCCCC------ceeeEeeEEEeCCe
Q 039514 697 TDNFAENNIIGRGGFGSVYGARL--EDGMKIAIKVFHQQCASALKSFEAECEVLKKIRHR------NLIKVISSCSNDDF 768 (790)
Q Consensus 697 ~~~~~~~~~ig~g~~g~v~~~~~--~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~~~h~------nlv~l~~~~~~~~~ 768 (790)
.++|...+.||+|+||.||+|.. .+++.||||.+.... ...+.+.+|++++..++|+ +++++++++...+.
T Consensus 13 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~~ 91 (339)
T 1z57_A 13 SARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVD-RYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGH 91 (339)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSSH-HHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETTE
T ss_pred cCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecCC-chhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCCc
Confidence 35789999999999999999984 468899999997543 3346678899888877655 49999999999999
Q ss_pred EEEEEecCCCCCHHHHHhcC
Q 039514 769 KALVLEYMSNGSLGDWLHSS 788 (790)
Q Consensus 769 ~~lv~e~~~~G~L~~~l~~~ 788 (790)
.++||||+ +|+|.+++...
T Consensus 92 ~~lv~e~~-~~~l~~~l~~~ 110 (339)
T 1z57_A 92 ICIVFELL-GLSTYDFIKEN 110 (339)
T ss_dssp EEEEEECC-CCBHHHHHHHT
T ss_pred EEEEEcCC-CCCHHHHHHhc
Confidence 99999999 88999998764
No 392
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=98.71 E-value=1.2e-08 Score=108.41 Aligned_cols=93 Identities=23% Similarity=0.290 Sum_probs=62.9
Q ss_pred HHHHHHhcCccccceeccCCcEEEEEEEE-cCCcEEEEEEecccchHHHHHHHHHHHHHhcCCCCceeeEeeEEEeCC--
Q 039514 691 LELLQATDNFAENNIIGRGGFGSVYGARL-EDGMKIAIKVFHQQCASALKSFEAECEVLKKIRHRNLIKVISSCSNDD-- 767 (790)
Q Consensus 691 ~~~~~~~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~~~h~nlv~l~~~~~~~~-- 767 (790)
.......++|...+.||+|+||.||+|.. .+|+.||||++...... ...+.+|++.+..++||||+++++++...+
T Consensus 16 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~ 94 (360)
T 3e3p_A 16 ERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRF-RNRELQIMQDLAVLHHPNIVQLQSYFYTLGER 94 (360)
T ss_dssp HHHHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECCTTC-CCHHHHHHHHHHHHCCTTBCCEEEEEEEECSS
T ss_pred hhchhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCccc-cHHHHHHHHHHHhcCCCCcccHHHhhhccccc
Confidence 34556778999999999999999999994 57899999998654221 234567788888899999999999987633
Q ss_pred -----eEEEEEecCCCCCHHHHH
Q 039514 768 -----FKALVLEYMSNGSLGDWL 785 (790)
Q Consensus 768 -----~~~lv~e~~~~G~L~~~l 785 (790)
..++||||+++ ++.+.+
T Consensus 95 ~~~~~~~~lv~e~~~~-~l~~~~ 116 (360)
T 3e3p_A 95 DRRDIYLNVVMEYVPD-TLHRCC 116 (360)
T ss_dssp CTTCEEEEEEEECCSC-BHHHHH
T ss_pred cccceeEEEEeecccc-cHHHHH
Confidence 38899999987 555443
No 393
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=98.71 E-value=2.1e-09 Score=112.32 Aligned_cols=91 Identities=22% Similarity=0.463 Sum_probs=77.3
Q ss_pred HhcCccccceeccCCcEEEEEEEEcCCcEEEEEEecccch--HHHHHHHHHHHHHhcCCCCceeeEeeEEEeCCeEEEEE
Q 039514 696 ATDNFAENNIIGRGGFGSVYGARLEDGMKIAIKVFHQQCA--SALKSFEAECEVLKKIRHRNLIKVISSCSNDDFKALVL 773 (790)
Q Consensus 696 ~~~~~~~~~~ig~g~~g~v~~~~~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~~~h~nlv~l~~~~~~~~~~~lv~ 773 (790)
..++|...+.||+|+||.||+|.... .||+|.+..... ...+.+.+|+.++.+++||||+++++++...+..++||
T Consensus 31 ~~~~~~~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~iv~ 108 (319)
T 2y4i_B 31 PFEQLEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIIT 108 (319)
T ss_dssp CCSCEECCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEEEEC
T ss_pred CHHHeEEeeEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceEEEe
Confidence 45778999999999999999998643 599999865322 22345778999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhcC
Q 039514 774 EYMSNGSLGDWLHSS 788 (790)
Q Consensus 774 e~~~~G~L~~~l~~~ 788 (790)
||+++|+|.++++..
T Consensus 109 e~~~~~~L~~~l~~~ 123 (319)
T 2y4i_B 109 SLCKGRTLYSVVRDA 123 (319)
T ss_dssp BCCCSEEHHHHTTSS
T ss_pred ecccCCcHHHHHHhc
Confidence 999999999998764
No 394
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=98.70 E-value=2.5e-08 Score=111.36 Aligned_cols=86 Identities=13% Similarity=0.112 Sum_probs=62.2
Q ss_pred cccceeccCCcEEEEEEEEcCCcEEEEEEecccch--------HHHHHHHHHHHHHhcCCCCceeeEeeEEEeCCeEEEE
Q 039514 701 AENNIIGRGGFGSVYGARLEDGMKIAIKVFHQQCA--------SALKSFEAECEVLKKIRHRNLIKVISSCSNDDFKALV 772 (790)
Q Consensus 701 ~~~~~ig~g~~g~v~~~~~~~~~~vavK~~~~~~~--------~~~~~~~~e~~~l~~~~h~nlv~l~~~~~~~~~~~lv 772 (790)
...++||+|+||.||+|. ..++.+|+|....... ...+.+.+|++++++++||||+++..++...+..|+|
T Consensus 339 ~~~~~LG~G~fg~Vy~~~-~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lV 417 (540)
T 3en9_A 339 IPEHLIGKGAEADIKRDS-YLDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIM 417 (540)
T ss_dssp ---------CCEEEEEEE-CSSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEE
T ss_pred CCCCEEeeCCCEEEEEEE-ECCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEE
Confidence 456799999999999995 4578889988643211 1234589999999999999999777777777888999
Q ss_pred EecCCCCCHHHHHhc
Q 039514 773 LEYMSNGSLGDWLHS 787 (790)
Q Consensus 773 ~e~~~~G~L~~~l~~ 787 (790)
|||+++|+|.++++.
T Consensus 418 mE~~~ggsL~~~l~~ 432 (540)
T 3en9_A 418 MSYINGKLAKDVIED 432 (540)
T ss_dssp EECCCSEEHHHHSTT
T ss_pred EECCCCCCHHHHHHH
Confidence 999999999998764
No 395
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.67 E-value=2.6e-08 Score=104.75 Aligned_cols=59 Identities=20% Similarity=0.422 Sum_probs=29.2
Q ss_pred cccCceEeCcCCccccc----CcccccCCcccCeeeCCCCcccccCCccccC-CCCCCEEECCCCc
Q 039514 503 LKVLLGINLSENNLSGD----MPATIGGLKDLQFMDLAYNRLEGPIPESFGD-LTSLEVLNLSKNK 563 (790)
Q Consensus 503 l~~L~~L~Ls~N~l~~~----~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~-l~~L~~L~L~~N~ 563 (790)
++.|+.|+|+.|.+.+. ++..+..+++|+.|+|++|.++...-..+.. + ...+++++++
T Consensus 278 ~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~d~~~~~l~~al--g~~~~~~~~~ 341 (362)
T 2ra8_A 278 LPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLSDEMKKELQKSL--PMKIDVSDSQ 341 (362)
T ss_dssp GGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCCHHHHHHHHHHC--CSEEECCSBC
T ss_pred CCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCCHHHHHHHHHHc--CCEEEecCCc
Confidence 45566666666655542 2222234566666666666655332222222 1 2446666655
No 396
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=98.67 E-value=7.3e-09 Score=108.18 Aligned_cols=92 Identities=26% Similarity=0.412 Sum_probs=77.5
Q ss_pred HhcCccccceeccCCcEEEEEEE-EcCCcEEEEEEecccchH------HHHHHHHHHHHHhcCC--CCceeeEeeEEEeC
Q 039514 696 ATDNFAENNIIGRGGFGSVYGAR-LEDGMKIAIKVFHQQCAS------ALKSFEAECEVLKKIR--HRNLIKVISSCSND 766 (790)
Q Consensus 696 ~~~~~~~~~~ig~g~~g~v~~~~-~~~~~~vavK~~~~~~~~------~~~~~~~e~~~l~~~~--h~nlv~l~~~~~~~ 766 (790)
...+|...+.||+|+||.||+|. ..+++.||||.+...... ..+.+.+|+.++.+++ ||||+++++++...
T Consensus 41 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~~ 120 (320)
T 3a99_A 41 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERP 120 (320)
T ss_dssp CTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECS
T ss_pred ccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEecC
Confidence 45679999999999999999998 567899999999754321 1234667999999986 59999999999999
Q ss_pred CeEEEEEecCCC-CCHHHHHhc
Q 039514 767 DFKALVLEYMSN-GSLGDWLHS 787 (790)
Q Consensus 767 ~~~~lv~e~~~~-G~L~~~l~~ 787 (790)
+..++|+||+.+ |+|.+++..
T Consensus 121 ~~~~lv~e~~~~~~~L~~~l~~ 142 (320)
T 3a99_A 121 DSFVLILERPEPVQDLFDFITE 142 (320)
T ss_dssp SEEEEEEECCSSEEEHHHHHHH
T ss_pred CcEEEEEEcCCCCccHHHHHhc
Confidence 999999999986 899999875
No 397
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=98.67 E-value=2.6e-08 Score=102.69 Aligned_cols=88 Identities=24% Similarity=0.429 Sum_probs=73.3
Q ss_pred hcCccccceeccCCcEEEEEEE-EcCCcEEEEEEecccchHHHHHHHHHHHHHhcCCCCceeeEeeEE-EeCCeEEEEEe
Q 039514 697 TDNFAENNIIGRGGFGSVYGAR-LEDGMKIAIKVFHQQCASALKSFEAECEVLKKIRHRNLIKVISSC-SNDDFKALVLE 774 (790)
Q Consensus 697 ~~~~~~~~~ig~g~~g~v~~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~~~h~nlv~l~~~~-~~~~~~~lv~e 774 (790)
.++|...+.||+|+||.||+|. ..+++.||||.+..... .+++.+|+.++.+++|++++..++++ ..++..++|||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e 85 (296)
T 3uzp_A 8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVME 85 (296)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSS--CCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred ccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcc--hhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEEE
Confidence 4679999999999999999999 47899999999865432 23578999999999988876655555 56788899999
Q ss_pred cCCCCCHHHHHhc
Q 039514 775 YMSNGSLGDWLHS 787 (790)
Q Consensus 775 ~~~~G~L~~~l~~ 787 (790)
|+ +|+|.++++.
T Consensus 86 ~~-~~~L~~~~~~ 97 (296)
T 3uzp_A 86 LL-GPSLEDLFNF 97 (296)
T ss_dssp CC-CCBHHHHHHH
T ss_pred ec-CCCHHHHHHh
Confidence 99 8999999874
No 398
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=98.65 E-value=1.8e-08 Score=109.32 Aligned_cols=84 Identities=26% Similarity=0.469 Sum_probs=67.5
Q ss_pred cCccccceeccCCcEEEEEEEE-cCCcEEEEEEecccchHHHHHHHHHHHHHhcCCCCceeeEeeEEEeC------CeEE
Q 039514 698 DNFAENNIIGRGGFGSVYGARL-EDGMKIAIKVFHQQCASALKSFEAECEVLKKIRHRNLIKVISSCSND------DFKA 770 (790)
Q Consensus 698 ~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~~~h~nlv~l~~~~~~~------~~~~ 770 (790)
..|...++||+|+||.||+|.. .+|+.||||++..... .+.+|++++++++|||||++++++... .+.+
T Consensus 54 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~~----~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~ 129 (420)
T 1j1b_A 54 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR----FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLN 129 (420)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCTT----SCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEE
T ss_pred ceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccch----hHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEE
Confidence 4588899999999999999995 5689999999865432 234799999999999999999998542 2467
Q ss_pred EEEecCCCCCHHHHHh
Q 039514 771 LVLEYMSNGSLGDWLH 786 (790)
Q Consensus 771 lv~e~~~~G~L~~~l~ 786 (790)
+||||+++ ++.+.++
T Consensus 130 lv~e~~~~-~l~~~~~ 144 (420)
T 1j1b_A 130 LVLDYVPE-TVYRVAR 144 (420)
T ss_dssp EEEECCCE-EHHHHHH
T ss_pred eehhcccc-cHHHHHH
Confidence 99999986 5666553
No 399
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=98.65 E-value=3.7e-08 Score=102.63 Aligned_cols=88 Identities=16% Similarity=0.217 Sum_probs=63.6
Q ss_pred hcCccccceeccCCcEEEEEEEE-cCCcEEEEEEecccch-HHH-HHHHHHHHHHhcCCCCceeeEeeEEEeCCeEEEEE
Q 039514 697 TDNFAENNIIGRGGFGSVYGARL-EDGMKIAIKVFHQQCA-SAL-KSFEAECEVLKKIRHRNLIKVISSCSNDDFKALVL 773 (790)
Q Consensus 697 ~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~~-~~~-~~~~~e~~~l~~~~h~nlv~l~~~~~~~~~~~lv~ 773 (790)
.++|...+.||+|+||.||+|.. .+|+.||||.+..... ... +.+..+..++..++||||+++++++..++..++||
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~ 103 (318)
T 2dyl_A 24 INDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAM 103 (318)
T ss_dssp GGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred hccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEEE
Confidence 46788899999999999999995 5789999999975432 222 33445556678889999999999999999999999
Q ss_pred ecCCCCCHHHHH
Q 039514 774 EYMSNGSLGDWL 785 (790)
Q Consensus 774 e~~~~G~L~~~l 785 (790)
||+ ++.+..+.
T Consensus 104 e~~-~~~~~~l~ 114 (318)
T 2dyl_A 104 ELM-GTCAEKLK 114 (318)
T ss_dssp CCC-SEEHHHHH
T ss_pred ecc-CCcHHHHH
Confidence 999 44454443
No 400
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=98.64 E-value=3e-08 Score=102.21 Aligned_cols=89 Identities=24% Similarity=0.425 Sum_probs=69.8
Q ss_pred HhcCccccceeccCCcEEEEEEE-EcCCcEEEEEEecccchHHHHHHHHHHHHHhcCCCCceeeEeeEE-EeCCeEEEEE
Q 039514 696 ATDNFAENNIIGRGGFGSVYGAR-LEDGMKIAIKVFHQQCASALKSFEAECEVLKKIRHRNLIKVISSC-SNDDFKALVL 773 (790)
Q Consensus 696 ~~~~~~~~~~ig~g~~g~v~~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~~~h~nlv~l~~~~-~~~~~~~lv~ 773 (790)
..++|...+.||+|+||.||+|. ..+++.||||.+..... .+++.+|+.++.+++|++++..++.+ ..++..++||
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~ 84 (296)
T 4hgt_A 7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVM 84 (296)
T ss_dssp ----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC-----CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEE
T ss_pred cCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeeccccc--chHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEE
Confidence 45789999999999999999999 47789999998754322 23477899999999988877666655 6678899999
Q ss_pred ecCCCCCHHHHHhc
Q 039514 774 EYMSNGSLGDWLHS 787 (790)
Q Consensus 774 e~~~~G~L~~~l~~ 787 (790)
||+ +|+|.+++..
T Consensus 85 e~~-~~~L~~~~~~ 97 (296)
T 4hgt_A 85 ELL-GPSLEDLFNF 97 (296)
T ss_dssp ECC-CCBHHHHHHH
T ss_pred Ecc-CCCHHHHHHH
Confidence 999 9999999874
No 401
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=98.62 E-value=2.8e-08 Score=106.20 Aligned_cols=89 Identities=16% Similarity=0.338 Sum_probs=75.1
Q ss_pred hcCccccceeccCCcEEEEEEE-EcCCcEEEEEEecccchHHHHHHHHHHHHHhcCC-----------CCceeeEeeEEE
Q 039514 697 TDNFAENNIIGRGGFGSVYGAR-LEDGMKIAIKVFHQQCASALKSFEAECEVLKKIR-----------HRNLIKVISSCS 764 (790)
Q Consensus 697 ~~~~~~~~~ig~g~~g~v~~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~~~-----------h~nlv~l~~~~~ 764 (790)
..+|...+.||+|+||.||+|. ..+++.||||.+.... ...+.+.+|+.++.+++ ||||+++++++.
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~ 96 (373)
T 1q8y_A 18 DARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDK-VYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFN 96 (373)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEE
T ss_pred CCeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCCc-cchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhh
Confidence 3678999999999999999999 4678999999997543 23456788999888776 899999999987
Q ss_pred eCC----eEEEEEecCCCCCHHHHHhc
Q 039514 765 NDD----FKALVLEYMSNGSLGDWLHS 787 (790)
Q Consensus 765 ~~~----~~~lv~e~~~~G~L~~~l~~ 787 (790)
..+ ..++||||+ +|+|.+++..
T Consensus 97 ~~~~~~~~~~lv~e~~-~~~L~~~~~~ 122 (373)
T 1q8y_A 97 HKGPNGVHVVMVFEVL-GENLLALIKK 122 (373)
T ss_dssp EEETTEEEEEEEECCC-CEEHHHHHHH
T ss_pred ccCCCCceEEEEEecC-CCCHHHHHHH
Confidence 644 789999999 8899999875
No 402
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=98.62 E-value=5.9e-08 Score=104.03 Aligned_cols=91 Identities=24% Similarity=0.363 Sum_probs=75.5
Q ss_pred HhcCccccceeccCCcEEEEEEE-EcCCcEEEEEEecccchHHHHHHHHHHHHHhcCC-CC-----ceeeEeeEEEeCCe
Q 039514 696 ATDNFAENNIIGRGGFGSVYGAR-LEDGMKIAIKVFHQQCASALKSFEAECEVLKKIR-HR-----NLIKVISSCSNDDF 768 (790)
Q Consensus 696 ~~~~~~~~~~ig~g~~g~v~~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~~~-h~-----nlv~l~~~~~~~~~ 768 (790)
..++|...+.||+|+||.||+|. ..+++.||||+++... ....++.+|+.++..++ |+ +++++++++...+.
T Consensus 52 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~ 130 (382)
T 2vx3_A 52 WMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKK-AFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNH 130 (382)
T ss_dssp ETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSSH-HHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETTE
T ss_pred eeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEeccH-HHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCCc
Confidence 45789999999999999999998 4578899999997543 23456777888887774 54 49999999999999
Q ss_pred EEEEEecCCCCCHHHHHhcC
Q 039514 769 KALVLEYMSNGSLGDWLHSS 788 (790)
Q Consensus 769 ~~lv~e~~~~G~L~~~l~~~ 788 (790)
.++||||++ |+|.++++..
T Consensus 131 ~~lv~e~~~-~~L~~~l~~~ 149 (382)
T 2vx3_A 131 LCLVFEMLS-YNLYDLLRNT 149 (382)
T ss_dssp EEEEEECCC-CBHHHHHHHT
T ss_pred eEEEEecCC-CCHHHHHhhc
Confidence 999999996 5999998764
No 403
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=98.59 E-value=3.7e-08 Score=105.95 Aligned_cols=79 Identities=27% Similarity=0.473 Sum_probs=64.1
Q ss_pred cCccccceeccCCcEEEEEEEEcCCcEEEEEEecccchHHHHHHHHHHHHHhcCCCCceeeEeeEEEeCC------eEEE
Q 039514 698 DNFAENNIIGRGGFGSVYGARLEDGMKIAIKVFHQQCASALKSFEAECEVLKKIRHRNLIKVISSCSNDD------FKAL 771 (790)
Q Consensus 698 ~~~~~~~~ig~g~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~~~h~nlv~l~~~~~~~~------~~~l 771 (790)
.+|...++||+|+||.||+|....+..||+|++...... ..+|+++++.++|||||++++++...+ ..++
T Consensus 40 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~~----~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~l 115 (394)
T 4e7w_A 40 IAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKRF----KNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNL 115 (394)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTTS----CCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEEE
T ss_pred ceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcch----HHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEEE
Confidence 568889999999999999999766667999888643221 236999999999999999999986533 3789
Q ss_pred EEecCCCCC
Q 039514 772 VLEYMSNGS 780 (790)
Q Consensus 772 v~e~~~~G~ 780 (790)
||||++++.
T Consensus 116 v~e~~~~~l 124 (394)
T 4e7w_A 116 VLEYVPETV 124 (394)
T ss_dssp EEECCSEEH
T ss_pred EeeccCccH
Confidence 999998753
No 404
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=98.58 E-value=7.1e-08 Score=106.01 Aligned_cols=88 Identities=20% Similarity=0.351 Sum_probs=73.0
Q ss_pred hcCccccceeccCCcEEEEEEE-EcCCcEEEEEEecccchHHHHHHHHHHHHHhcCCC-CceeeEeeEEEeCCeEEEEEe
Q 039514 697 TDNFAENNIIGRGGFGSVYGAR-LEDGMKIAIKVFHQQCASALKSFEAECEVLKKIRH-RNLIKVISSCSNDDFKALVLE 774 (790)
Q Consensus 697 ~~~~~~~~~ig~g~~g~v~~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~~~h-~nlv~l~~~~~~~~~~~lv~e 774 (790)
.++|...+.||+|+||.||+|. ..+++.||||.+..... .+++.+|++++..++| +++..+..++...+..++|||
T Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~--~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme 83 (483)
T 3sv0_A 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK--HPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMD 83 (483)
T ss_dssp TTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCS--SCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred CCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEeccccc--cHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEE
Confidence 3678999999999999999999 46789999998865432 2347789999999976 556667777788899999999
Q ss_pred cCCCCCHHHHHhc
Q 039514 775 YMSNGSLGDWLHS 787 (790)
Q Consensus 775 ~~~~G~L~~~l~~ 787 (790)
|+ +|+|.++++.
T Consensus 84 ~~-g~sL~~ll~~ 95 (483)
T 3sv0_A 84 LL-GPSLEDLFNF 95 (483)
T ss_dssp CC-CCBHHHHHHH
T ss_pred CC-CCCHHHHHHh
Confidence 99 8999999874
No 405
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=98.56 E-value=9.6e-08 Score=97.23 Aligned_cols=89 Identities=18% Similarity=0.200 Sum_probs=68.5
Q ss_pred HHHHHHhcCccccceeccCCcEEEEEEEEcCCcEEEEEEecccch------------------HHHHHHHHHHHHHhcCC
Q 039514 691 LELLQATDNFAENNIIGRGGFGSVYGARLEDGMKIAIKVFHQQCA------------------SALKSFEAECEVLKKIR 752 (790)
Q Consensus 691 ~~~~~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~vavK~~~~~~~------------------~~~~~~~~e~~~l~~~~ 752 (790)
..+......|...+.||+|+||.||+|...+|+.||||.++.... .....+.+|+.++++++
T Consensus 83 ~~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~ 162 (282)
T 1zar_A 83 HRLVRSGKVDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ 162 (282)
T ss_dssp HHHHHTTSCSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHhCCeEEEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc
Confidence 344455566777899999999999999987799999999964321 13456889999999999
Q ss_pred CCceeeEeeEEEeCCeEEEEEecCCCCCHHH
Q 039514 753 HRNLIKVISSCSNDDFKALVLEYMSNGSLGD 783 (790)
Q Consensus 753 h~nlv~l~~~~~~~~~~~lv~e~~~~G~L~~ 783 (790)
| +++.+++.. +..|+||||+++|+|.+
T Consensus 163 ~---~~v~~~~~~-~~~~lvmE~~~g~~L~~ 189 (282)
T 1zar_A 163 G---LAVPKVYAW-EGNAVLMELIDAKELYR 189 (282)
T ss_dssp T---SSSCCEEEE-ETTEEEEECCCCEEGGG
T ss_pred C---CCcCeEEec-cceEEEEEecCCCcHHH
Confidence 4 555555543 45699999999999987
No 406
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=98.54 E-value=1e-07 Score=100.96 Aligned_cols=90 Identities=18% Similarity=0.296 Sum_probs=74.2
Q ss_pred hcCccccceeccCCcEEEEEEEE-cCC-cEEEEEEecccchHHHHHHHHHHHHHhcCCCCc------eeeEeeEEEeCCe
Q 039514 697 TDNFAENNIIGRGGFGSVYGARL-EDG-MKIAIKVFHQQCASALKSFEAECEVLKKIRHRN------LIKVISSCSNDDF 768 (790)
Q Consensus 697 ~~~~~~~~~ig~g~~g~v~~~~~-~~~-~~vavK~~~~~~~~~~~~~~~e~~~l~~~~h~n------lv~l~~~~~~~~~ 768 (790)
.++|...+.||+|+||.||+|.. .++ +.||||.++... ...+.+.+|+.++.+++|++ ++.+++++...+.
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~ 96 (355)
T 2eu9_A 18 QERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVG-KYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGH 96 (355)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETTE
T ss_pred cccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEcccc-cchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCCe
Confidence 36799999999999999999984 344 789999997543 23456788999998887666 8999999999999
Q ss_pred EEEEEecCCCCCHHHHHhcC
Q 039514 769 KALVLEYMSNGSLGDWLHSS 788 (790)
Q Consensus 769 ~~lv~e~~~~G~L~~~l~~~ 788 (790)
.++||||+ +|++.+++...
T Consensus 97 ~~lv~e~~-~~~l~~~l~~~ 115 (355)
T 2eu9_A 97 MCIAFELL-GKNTFEFLKEN 115 (355)
T ss_dssp EEEEEECC-CCBHHHHHHHT
T ss_pred EEEEEecc-CCChHHHHHhc
Confidence 99999999 66788887654
No 407
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.52 E-value=1.8e-08 Score=95.61 Aligned_cols=118 Identities=14% Similarity=0.172 Sum_probs=64.2
Q ss_pred eccccCCCCCCCCEEECCCC-CCccc----CChhhhCCCCCCEEeCCCCCCccc----CCccccCCCCCcEEEccCccCc
Q 039514 68 TIPSQLGNLSSLTILNLSHN-KLSGS----VPSSIYTMHTLKFLDFTDNQLSGS----VSSFVFNMSSIVDIRLTNNRLS 138 (790)
Q Consensus 68 ~~~~~~~~l~~L~~L~Ls~N-~i~~~----~~~~~~~l~~L~~L~Ls~n~l~~~----~~~~~~~l~~L~~L~L~~N~l~ 138 (790)
.+...+...+.|++|+|++| .|... +...+...++|++|+|++|+|... +...+...++|++|+|++|.|.
T Consensus 27 ~l~~~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~ 106 (185)
T 1io0_A 27 TLKRIQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFIS 106 (185)
T ss_dssp HHHHHHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCC
T ss_pred HHHHHHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCC
Confidence 34445666778888888888 77532 334555667778888888777632 2233344455666666666654
Q ss_pred ccC----chhhhccCCCCCEEEC--CCCcCccc----CCcCCCCCCCCCeeecccCcc
Q 039514 139 GEL----PKNICNYLPHLKALFL--DKNMFHGK----IPSALSKCKQLQQLNLQLNNL 186 (790)
Q Consensus 139 ~~l----p~~~~~~l~~L~~L~L--~~N~i~~~----~p~~~~~l~~L~~L~L~~N~l 186 (790)
..- ...+ ...+.|++|+| ++|.|... +...+...++|++|+|++|.+
T Consensus 107 ~~g~~~l~~~L-~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i 163 (185)
T 1io0_A 107 GSGILALVEAL-QSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQ 163 (185)
T ss_dssp HHHHHHHHHGG-GGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSH
T ss_pred HHHHHHHHHHH-HhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCC
Confidence 221 1111 23445555555 55555432 222333345555555555554
No 408
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=98.50 E-value=1.2e-07 Score=106.40 Aligned_cols=84 Identities=18% Similarity=0.076 Sum_probs=63.5
Q ss_pred eccCCcEEEEEEE-EcCCcEEEEEEecccc----------hHHHHHHHHHHHHHhcC-CCCceeeEeeEEEeCCeEEEEE
Q 039514 706 IGRGGFGSVYGAR-LEDGMKIAIKVFHQQC----------ASALKSFEAECEVLKKI-RHRNLIKVISSCSNDDFKALVL 773 (790)
Q Consensus 706 ig~g~~g~v~~~~-~~~~~~vavK~~~~~~----------~~~~~~~~~e~~~l~~~-~h~nlv~l~~~~~~~~~~~lv~ 773 (790)
.+.|++|.+..+. +..|+.||||.+.... ....++|.+|+++|+++ .|+||+++++++.+++..||||
T Consensus 242 ~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLVM 321 (569)
T 4azs_A 242 PYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLVM 321 (569)
T ss_dssp -C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEEE
T ss_pred cccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEEE
Confidence 4566677666555 5568999999996431 22346799999999999 7999999999999999999999
Q ss_pred ecCCCCCHHHHHhcCC
Q 039514 774 EYMSNGSLGDWLHSSN 789 (790)
Q Consensus 774 e~~~~G~L~~~l~~~~ 789 (790)
||++||+|.++|++.+
T Consensus 322 Eyv~G~~L~d~i~~~~ 337 (569)
T 4azs_A 322 EKLPGRLLSDMLAAGE 337 (569)
T ss_dssp ECCCSEEHHHHHHTTC
T ss_pred ecCCCCcHHHHHHhCC
Confidence 9999999999998754
No 409
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.41 E-value=1e-07 Score=94.74 Aligned_cols=81 Identities=23% Similarity=0.320 Sum_probs=38.5
Q ss_pred CCCCCCEEeCCCCCCcc--cCCccccCCCCCcEEEccCccCcccCchhhhccCCCCCEEECCCCcCcccCCc-------C
Q 039514 99 TMHTLKFLDFTDNQLSG--SVSSFVFNMSSIVDIRLTNNRLSGELPKNICNYLPHLKALFLDKNMFHGKIPS-------A 169 (790)
Q Consensus 99 ~l~~L~~L~Ls~n~l~~--~~~~~~~~l~~L~~L~L~~N~l~~~lp~~~~~~l~~L~~L~L~~N~i~~~~p~-------~ 169 (790)
.+++|++|+|++|+|++ .++..+..+++|+.|+|++|+|++.-.-..+..+ +|++|+|++|.+.+..|. .
T Consensus 168 ~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~~~l~~l~~l-~L~~L~L~~Npl~~~~~~~~~y~~~i 246 (267)
T 3rw6_A 168 NIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSERELDKIKGL-KLEELWLDGNSLCDTFRDQSTYISAI 246 (267)
T ss_dssp HCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSGGGGGGGTTS-CCSEEECTTSTTGGGCSSHHHHHHHH
T ss_pred hCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCchhhhhcccC-CcceEEccCCcCccccCcchhHHHHH
Confidence 44555555555555554 2234444555555555555555521011111122 566666666665544331 2
Q ss_pred CCCCCCCCeee
Q 039514 170 LSKCKQLQQLN 180 (790)
Q Consensus 170 ~~~l~~L~~L~ 180 (790)
+..+++|+.||
T Consensus 247 l~~~P~L~~LD 257 (267)
T 3rw6_A 247 RERFPKLLRLD 257 (267)
T ss_dssp HHHCTTCCEES
T ss_pred HHHCcccCeEC
Confidence 44555565554
No 410
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.33 E-value=1.4e-07 Score=89.26 Aligned_cols=97 Identities=13% Similarity=0.179 Sum_probs=65.9
Q ss_pred cCChhhhCCCCCCEEeCCCC-CCccc----CCccccCCCCCcEEEccCccCcccCchhh---hccCCCCCEEECCCCcCc
Q 039514 92 SVPSSIYTMHTLKFLDFTDN-QLSGS----VSSFVFNMSSIVDIRLTNNRLSGELPKNI---CNYLPHLKALFLDKNMFH 163 (790)
Q Consensus 92 ~~~~~~~~l~~L~~L~Ls~n-~l~~~----~~~~~~~l~~L~~L~L~~N~l~~~lp~~~---~~~l~~L~~L~L~~N~i~ 163 (790)
.+...+...+.|++|+|++| .|... +...+...++|++|+|++|.+...-...+ +...+.|++|+|++|.|.
T Consensus 27 ~l~~~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~ 106 (185)
T 1io0_A 27 TLKRIQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFIS 106 (185)
T ss_dssp HHHHHHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCC
T ss_pred HHHHHHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCC
Confidence 34556777889999999999 88643 34455667888888888888763221111 234567888888888877
Q ss_pred cc----CCcCCCCCCCCCeeec--ccCcccc
Q 039514 164 GK----IPSALSKCKQLQQLNL--QLNNLSG 188 (790)
Q Consensus 164 ~~----~p~~~~~l~~L~~L~L--~~N~l~~ 188 (790)
.. +..++...++|++|+| ++|.|+.
T Consensus 107 ~~g~~~l~~~L~~n~~L~~L~L~~~~N~i~~ 137 (185)
T 1io0_A 107 GSGILALVEALQSNTSLIELRIDNQSQPLGN 137 (185)
T ss_dssp HHHHHHHHHGGGGCSSCCEEECCCCSSCCCH
T ss_pred HHHHHHHHHHHHhCCCceEEEecCCCCCCCH
Confidence 53 3455666677777777 6677754
No 411
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=97.97 E-value=4.9e-06 Score=83.40 Aligned_cols=82 Identities=18% Similarity=0.240 Sum_probs=59.2
Q ss_pred ccccceeccCCcEEEEEEEE-cCCcE--EEEEEecccch------------------------HHHHHHHHHHHHHhcCC
Q 039514 700 FAENNIIGRGGFGSVYGARL-EDGMK--IAIKVFHQQCA------------------------SALKSFEAECEVLKKIR 752 (790)
Q Consensus 700 ~~~~~~ig~g~~g~v~~~~~-~~~~~--vavK~~~~~~~------------------------~~~~~~~~e~~~l~~~~ 752 (790)
|...+.||+|+||.||+|.. .+|+. ||||.++.... .....+.+|+..+.+++
T Consensus 49 ~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~ 128 (258)
T 1zth_A 49 TAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAK 128 (258)
T ss_dssp EEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHH
T ss_pred hhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHH
Confidence 56778999999999999996 78999 99998754311 11235789999999998
Q ss_pred CCce--eeEeeEEEeCCeEEEEEecCCC-C----CHHHHH
Q 039514 753 HRNL--IKVISSCSNDDFKALVLEYMSN-G----SLGDWL 785 (790)
Q Consensus 753 h~nl--v~l~~~~~~~~~~~lv~e~~~~-G----~L~~~l 785 (790)
|+++ ...+++ +..++||||+.+ | +|.++.
T Consensus 129 ~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~ 164 (258)
T 1zth_A 129 EAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELG 164 (258)
T ss_dssp HTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHG
T ss_pred hCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHh
Confidence 8764 233322 356899999942 4 676654
No 412
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=97.75 E-value=5.2e-06 Score=86.86 Aligned_cols=85 Identities=12% Similarity=0.119 Sum_probs=55.3
Q ss_pred cCccccceeccCCcEEEEEEEEcCCcEEEEEEecccch--------------HHHH--------HHHHHHHHHhcCCCCc
Q 039514 698 DNFAENNIIGRGGFGSVYGARLEDGMKIAIKVFHQQCA--------------SALK--------SFEAECEVLKKIRHRN 755 (790)
Q Consensus 698 ~~~~~~~~ig~g~~g~v~~~~~~~~~~vavK~~~~~~~--------------~~~~--------~~~~e~~~l~~~~h~n 755 (790)
.-|.....||+|+||.||.|...+|+.||||.++.... .... ...+|.+.|.++.+..
T Consensus 95 ~iY~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~g 174 (397)
T 4gyi_A 95 DVYSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEG 174 (397)
T ss_dssp SCSEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CEEEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcC
Confidence 34888999999999999999988899999998753210 0011 1234666666665444
Q ss_pred eeeEeeEEEeCCeEEEEEecCCCCCHHHH
Q 039514 756 LIKVISSCSNDDFKALVLEYMSNGSLGDW 784 (790)
Q Consensus 756 lv~l~~~~~~~~~~~lv~e~~~~G~L~~~ 784 (790)
+.-...+.... .++||||++++.|.+.
T Consensus 175 v~vp~p~~~~~--~~LVME~i~G~~L~~l 201 (397)
T 4gyi_A 175 FPVPEPIAQSR--HTIVMSLVDALPMRQV 201 (397)
T ss_dssp CSCCCEEEEET--TEEEEECCSCEEGGGC
T ss_pred CCCCeeeeccC--ceEEEEecCCccHhhh
Confidence 32211111122 3699999998887654
No 413
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=97.65 E-value=3.6e-05 Score=83.02 Aligned_cols=57 Identities=18% Similarity=0.207 Sum_probs=46.1
Q ss_pred hcCccccceeccCCcEEEEEEE-EcCCcEEEEEEecccch---HHHHHHHHHHHHHhcCCC
Q 039514 697 TDNFAENNIIGRGGFGSVYGAR-LEDGMKIAIKVFHQQCA---SALKSFEAECEVLKKIRH 753 (790)
Q Consensus 697 ~~~~~~~~~ig~g~~g~v~~~~-~~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~~~h 753 (790)
...|...++||+|+||.||+|. ..+|+.||||++..... ...+.+.+|+.++..++|
T Consensus 77 ~~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~ 137 (413)
T 3dzo_A 77 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRG 137 (413)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTT
T ss_pred ceeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhcc
Confidence 3557788999999999999999 66799999999974322 224678899999999987
No 414
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.54 E-value=2.2e-05 Score=72.16 Aligned_cols=35 Identities=17% Similarity=-0.018 Sum_probs=19.8
Q ss_pred CCCEEECCCCc-CcccCCcCCCCCCCCCeeecccCc
Q 039514 151 HLKALFLDKNM-FHGKIPSALSKCKQLQQLNLQLNN 185 (790)
Q Consensus 151 ~L~~L~L~~N~-i~~~~p~~~~~l~~L~~L~L~~N~ 185 (790)
+|++|+|++|. ++..--.++..+++|++|+|+++.
T Consensus 115 ~L~~L~Ls~C~~ITD~Gl~~L~~~~~L~~L~L~~c~ 150 (176)
T 3e4g_A 115 SMLEMEIISCGNVTDKGIIALHHFRNLKYLFLSDLP 150 (176)
T ss_dssp HCCEEEEESCTTCCHHHHHHGGGCTTCCEEEEESCT
T ss_pred CCCEEEcCCCCcCCHHHHHHHhcCCCCCEEECCCCC
Confidence 45566665553 444333345566677777776664
No 415
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.53 E-value=2.3e-05 Score=72.03 Aligned_cols=82 Identities=15% Similarity=0.118 Sum_probs=37.3
Q ss_pred CCceEeccCCcccccccccccccccCceEeCcCCc-ccccCcccccCC----cccCeeeCCCCc-ccccCCccccCCCCC
Q 039514 481 DILFFDFSSNFLVGTLSFDIGNLKVLLGINLSENN-LSGDMPATIGGL----KDLQFMDLAYNR-LEGPIPESFGDLTSL 554 (790)
Q Consensus 481 ~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~-l~~~~~~~~~~l----~~L~~L~Ls~N~-l~~~~p~~~~~l~~L 554 (790)
.|+.||++++.+++..-..+..+++|++|+|++|. |+..--..+..+ ++|++|+|+++. ++...-..+..+++|
T Consensus 62 ~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~L 141 (176)
T 3e4g_A 62 KIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRNL 141 (176)
T ss_dssp CEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTTC
T ss_pred eEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCCC
Confidence 34444444444443333334455555555555553 443222233332 245555555543 443322334445555
Q ss_pred CEEECCCC
Q 039514 555 EVLNLSKN 562 (790)
Q Consensus 555 ~~L~L~~N 562 (790)
+.|+++++
T Consensus 142 ~~L~L~~c 149 (176)
T 3e4g_A 142 KYLFLSDL 149 (176)
T ss_dssp CEEEEESC
T ss_pred CEEECCCC
Confidence 55555554
No 416
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=97.24 E-value=7.2e-05 Score=70.09 Aligned_cols=68 Identities=13% Similarity=0.179 Sum_probs=42.1
Q ss_pred ccCCCCCCCCEEECCCC-CCcc----cCChhhhCCCCCCEEeCCCCCCcccC----CccccCCCCCcEEEccCccCc
Q 039514 71 SQLGNLSSLTILNLSHN-KLSG----SVPSSIYTMHTLKFLDFTDNQLSGSV----SSFVFNMSSIVDIRLTNNRLS 138 (790)
Q Consensus 71 ~~~~~l~~L~~L~Ls~N-~i~~----~~~~~~~~l~~L~~L~Ls~n~l~~~~----~~~~~~l~~L~~L~L~~N~l~ 138 (790)
..+.+-+.|+.|+|++| .|.. .+..++..-+.|+.|+|++|+|.... ...+..-++|+.|+|++|.|.
T Consensus 35 ~ll~~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig 111 (197)
T 1pgv_A 35 RLREDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLT 111 (197)
T ss_dssp HHHTTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCC
T ss_pred HHHhcCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCC
Confidence 34455667888888875 6652 23455566677888888888876332 233334556666666666665
No 417
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=97.06 E-value=0.00096 Score=66.73 Aligned_cols=91 Identities=12% Similarity=0.073 Sum_probs=71.2
Q ss_pred HHHHhcCccccceeccCCcEEEEEEEEcCCcEEEEEEecccchHHHHHHHHHHHHHhcCC-CCceeeEeeEEEeCCeEEE
Q 039514 693 LLQATDNFAENNIIGRGGFGSVYGARLEDGMKIAIKVFHQQCASALKSFEAECEVLKKIR-HRNLIKVISSCSNDDFKAL 771 (790)
Q Consensus 693 ~~~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~~~-h~nlv~l~~~~~~~~~~~l 771 (790)
+......|......|.|+.+.||++... ++.+++|............+.+|++++..+. |..+.++++++...+..|+
T Consensus 9 l~~~l~~~~~~~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~l 87 (263)
T 3tm0_A 9 LKKLIEKYRCVKDTEGMSPAKVYKLVGE-NENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNL 87 (263)
T ss_dssp HHHHHTTSEEEECCSCCSSSEEEEEECS-SCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEE
T ss_pred HHHHhccceeEeeccCCCCCeEEEEECC-CCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEE
Confidence 3445567888888898999999998744 6789999987532222235778999988874 6677789999988899999
Q ss_pred EEecCCCCCHHHH
Q 039514 772 VLEYMSNGSLGDW 784 (790)
Q Consensus 772 v~e~~~~G~L~~~ 784 (790)
||||++|.++.+.
T Consensus 88 v~e~i~G~~l~~~ 100 (263)
T 3tm0_A 88 LMSEADGVLCSEE 100 (263)
T ss_dssp EEECCSSEEHHHH
T ss_pred EEEecCCeehhhc
Confidence 9999999988765
No 418
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.97 E-value=0.0012 Score=57.63 Aligned_cols=56 Identities=20% Similarity=0.290 Sum_probs=44.8
Q ss_pred EEECCCCCcc-eeccccCCCCCCCCEEECCCCCCcccCChhhhCCCCCCEEeCCCCCCc
Q 039514 57 ALDTSQFNLQ-GTIPSQLGNLSSLTILNLSHNKLSGSVPSSIYTMHTLKFLDFTDNQLS 114 (790)
Q Consensus 57 ~Ldl~~~~l~-~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~n~l~ 114 (790)
.+|.++++++ ..+|..+. ++|++|+|++|+|+.+.+..|..+++|++|+|++|.+.
T Consensus 12 ~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp EEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred EEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 5678888886 46676665 37899999999998888888888888888888888764
No 419
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.94 E-value=0.0014 Score=57.31 Aligned_cols=58 Identities=22% Similarity=0.326 Sum_probs=42.1
Q ss_pred eeeCCCCccc-ccCCccccCCCCCCEEECCCCcCcccCCccccccCCCCeEeCCCCcceec
Q 039514 532 FMDLAYNRLE-GPIPESFGDLTSLEVLNLSKNKISGSIPKSMEKLFYLRELNLSFNELEGE 591 (790)
Q Consensus 532 ~L~Ls~N~l~-~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 591 (790)
.++.+++.++ ..+|..+. ++|+.|+|++|+|+...+..|..+++|+.|+|++|++.+.
T Consensus 12 ~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~Cd 70 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWRCD 70 (130)
T ss_dssp EEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCBCS
T ss_pred EEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCeecc
Confidence 5677777775 23444332 4688888888888877777788888888888888888653
No 420
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=96.65 E-value=0.002 Score=65.18 Aligned_cols=77 Identities=18% Similarity=0.178 Sum_probs=59.6
Q ss_pred cccceeccCCcEEEEEEEEcCCcEEEEEEecccchHHHHHHHHHHHHHhcCCCC---ceeeEeeEEEeCCeEEEEEecCC
Q 039514 701 AENNIIGRGGFGSVYGARLEDGMKIAIKVFHQQCASALKSFEAECEVLKKIRHR---NLIKVISSCSNDDFKALVLEYMS 777 (790)
Q Consensus 701 ~~~~~ig~g~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~~~h~---nlv~l~~~~~~~~~~~lv~e~~~ 777 (790)
...+.+|.|.++.||++...+|+.++||............|.+|++.++.+.|. .+.+++++. ..++||||++
T Consensus 18 ~~~~~l~gG~~n~vy~v~~~dG~~~vvK~~~~~~~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~----~~~lvme~l~ 93 (288)
T 3d1u_A 18 AAVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEWVD 93 (288)
T ss_dssp EEEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEECCC
T ss_pred cceeeeCCcchhheEEEEeCCCCeEEEEecCCCCcchhHHHHHHHHHHHHHHhcCCCCcCeEEEec----CcEEEEEecc
Confidence 345789999999999999888999999997543222235688999999999765 466676653 3689999999
Q ss_pred CCCH
Q 039514 778 NGSL 781 (790)
Q Consensus 778 ~G~L 781 (790)
++.+
T Consensus 94 g~~~ 97 (288)
T 3d1u_A 94 ERPP 97 (288)
T ss_dssp CCCC
T ss_pred cCCC
Confidence 9875
No 421
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=96.50 E-value=0.0014 Score=61.39 Aligned_cols=91 Identities=13% Similarity=0.165 Sum_probs=57.1
Q ss_pred ChhhhCCCCCCEEeCCCC-CCccc----CCccccCCCCCcEEEccCccCcccCchhh---hccCCCCCEEECCCCcCccc
Q 039514 94 PSSIYTMHTLKFLDFTDN-QLSGS----VSSFVFNMSSIVDIRLTNNRLSGELPKNI---CNYLPHLKALFLDKNMFHGK 165 (790)
Q Consensus 94 ~~~~~~l~~L~~L~Ls~n-~l~~~----~~~~~~~l~~L~~L~L~~N~l~~~lp~~~---~~~l~~L~~L~L~~N~i~~~ 165 (790)
...+..-+.|++|+|++| +|... +-..+..-+.|+.|+|++|.|...--..+ ...-+.|++|+|++|.|...
T Consensus 34 ~~ll~~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~ 113 (197)
T 1pgv_A 34 NRLREDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPE 113 (197)
T ss_dssp HHHHTTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHH
T ss_pred HHHHhcCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHH
Confidence 344455678999999985 77532 34445567788888888888763221111 13346788888888877642
Q ss_pred ----CCcCCCCCCCCCeeecccC
Q 039514 166 ----IPSALSKCKQLQQLNLQLN 184 (790)
Q Consensus 166 ----~p~~~~~l~~L~~L~L~~N 184 (790)
+..++..-+.|++|+|++|
T Consensus 114 Ga~ala~aL~~N~tL~~L~L~n~ 136 (197)
T 1pgv_A 114 LLARLLRSTLVTQSIVEFKADNQ 136 (197)
T ss_dssp HHHHHHHHTTTTCCCSEEECCCC
T ss_pred HHHHHHHHHhhCCceeEEECCCC
Confidence 3334555566777777654
No 422
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=96.28 E-value=0.0017 Score=64.71 Aligned_cols=82 Identities=11% Similarity=0.040 Sum_probs=59.3
Q ss_pred cCccccceeccCCcEEEEEEEEcCCcEEEEEEecccchHHHHHHHHHHHHHhcCCCCce--eeEeeEEEeCCeEEEEEec
Q 039514 698 DNFAENNIIGRGGFGSVYGARLEDGMKIAIKVFHQQCASALKSFEAECEVLKKIRHRNL--IKVISSCSNDDFKALVLEY 775 (790)
Q Consensus 698 ~~~~~~~~ig~g~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~~~h~nl--v~l~~~~~~~~~~~lv~e~ 775 (790)
..+....+.+.|..+.||++...+|+.+++|...... ...+.+|+.++..+.+..+ .+++++...++..++||||
T Consensus 20 ~~~~~~~~~~gg~~~~v~~~~~~~g~~~vlK~~~~~~---~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~ 96 (264)
T 1nd4_A 20 FGYDWAQQTIGCSDAAVFRLSAQGRPVLFVKTDLSGA---LNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGE 96 (264)
T ss_dssp TTCEEEECSCTTSSCEEEEEECTTSCCEEEEEECSCT---TSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEEC
T ss_pred CCCceEecccCCCCceEEEEecCCCCeEEEEeCCccc---chhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEe
Confidence 3444433334566799999987778889999976542 2346688888888854454 4588888777788999999
Q ss_pred CCCCCHH
Q 039514 776 MSNGSLG 782 (790)
Q Consensus 776 ~~~G~L~ 782 (790)
++|+++.
T Consensus 97 i~G~~l~ 103 (264)
T 1nd4_A 97 VPGQDLL 103 (264)
T ss_dssp CSSEETT
T ss_pred cCCcccC
Confidence 9998774
No 423
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=92.42 E-value=0.12 Score=51.94 Aligned_cols=78 Identities=19% Similarity=0.232 Sum_probs=53.9
Q ss_pred ccccceeccCCcEEEEEEEEcCCcEEEEEEecccchHHHHHHHHHHHHHhcCC-C-C-ceeeEeeEEEeCCeEEEEEecC
Q 039514 700 FAENNIIGRGGFGSVYGARLEDGMKIAIKVFHQQCASALKSFEAECEVLKKIR-H-R-NLIKVISSCSNDDFKALVLEYM 776 (790)
Q Consensus 700 ~~~~~~ig~g~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~~~-h-~-nlv~l~~~~~~~~~~~lv~e~~ 776 (790)
+.....+|.|..+.||+.++.+|+.|.||+-..........|.+|.+.|..+. . + -+.+.+++ .. -++||||+
T Consensus 17 v~~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~--~~--~~lv~e~l 92 (288)
T 3f7w_A 17 VAAVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGW--DD--RTLAMEWV 92 (288)
T ss_dssp EEEEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEE--ET--TEEEEECC
T ss_pred eEEEEecCCCCCeEEEEEEECCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEec--cC--ceEEEEee
Confidence 44567789999999999999999999999876443322345778888887763 2 1 12333332 22 36899999
Q ss_pred CCCCH
Q 039514 777 SNGSL 781 (790)
Q Consensus 777 ~~G~L 781 (790)
+.+..
T Consensus 93 ~~~~~ 97 (288)
T 3f7w_A 93 DERPP 97 (288)
T ss_dssp CCCCC
T ss_pred cccCC
Confidence 87653
No 424
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=92.24 E-value=0.086 Score=55.06 Aligned_cols=79 Identities=11% Similarity=0.200 Sum_probs=55.4
Q ss_pred ccceeccCCcEEEEEEEEcCCcEEEEEEec--ccch-HHHHHHHHHHHHHhcCC--CCceeeEeeEEEeC---CeEEEEE
Q 039514 702 ENNIIGRGGFGSVYGARLEDGMKIAIKVFH--QQCA-SALKSFEAECEVLKKIR--HRNLIKVISSCSND---DFKALVL 773 (790)
Q Consensus 702 ~~~~ig~g~~g~v~~~~~~~~~~vavK~~~--~~~~-~~~~~~~~e~~~l~~~~--h~nlv~l~~~~~~~---~~~~lv~ 773 (790)
..+.++.|.++.||+....+ ..+++|+.. .... .....+.+|.+++..+. +..+.++++++.+. +..|+||
T Consensus 42 ~~~~l~~G~sn~~y~v~~~~-~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vm 120 (359)
T 3dxp_A 42 SVEQFKGGQSNPTFKLVTPG-QTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIM 120 (359)
T ss_dssp EEEECCC-CCSCEEEEECSS-CEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEE
T ss_pred eEEEcCCcccceEEEEEECC-ceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEE
Confidence 35678999999999987654 578888876 4321 12345778999998886 45577888888765 4589999
Q ss_pred ecCCCCCH
Q 039514 774 EYMSNGSL 781 (790)
Q Consensus 774 e~~~~G~L 781 (790)
||+++..+
T Consensus 121 e~v~G~~l 128 (359)
T 3dxp_A 121 EFVSGRVL 128 (359)
T ss_dssp ECCCCBCC
T ss_pred EecCCeec
Confidence 99998766
No 425
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=90.71 E-value=0.75 Score=46.60 Aligned_cols=76 Identities=14% Similarity=0.172 Sum_probs=58.5
Q ss_pred ccceeccCCcEEEEEEEEcCCcEEEEEEecccchHHHHHHHHHHHHHhcCC---CCceeeEeeEEEeCCeEEEEEecCCC
Q 039514 702 ENNIIGRGGFGSVYGARLEDGMKIAIKVFHQQCASALKSFEAECEVLKKIR---HRNLIKVISSCSNDDFKALVLEYMSN 778 (790)
Q Consensus 702 ~~~~ig~g~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~~~---h~nlv~l~~~~~~~~~~~lv~e~~~~ 778 (790)
..+.++.|....+|+... +++.++||...... ...+.+|.+.|..+. ..-+.+.++++...+..++||||+++
T Consensus 40 ~~~~l~gG~~n~~y~v~~-~~~~~vlK~~~~~~---~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~G 115 (312)
T 3jr1_A 40 HKEKLYSGEMNEIWLIND-EVQTVFVKINERSY---RSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALNK 115 (312)
T ss_dssp EEEEECCSSSSEEEEEES-SSCEEEEEEEEGGG---HHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCCC
T ss_pred eeEEeCCccceeeeEEEE-CCCeEEEEeCCccc---HHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEeccC
Confidence 456789999999999875 46788889876542 456778888887773 34567788888777889999999998
Q ss_pred CCH
Q 039514 779 GSL 781 (790)
Q Consensus 779 G~L 781 (790)
+.+
T Consensus 116 ~~~ 118 (312)
T 3jr1_A 116 SKN 118 (312)
T ss_dssp CCC
T ss_pred CCC
Confidence 754
No 426
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=88.72 E-value=0.33 Score=51.34 Aligned_cols=75 Identities=20% Similarity=0.231 Sum_probs=48.2
Q ss_pred cceeccCCcEEEEEEEE-cCCcEEEEEEecccch-------HHHHHHHHHHHHHhcCCC--Ccee-eEeeEEEeCCeEEE
Q 039514 703 NNIIGRGGFGSVYGARL-EDGMKIAIKVFHQQCA-------SALKSFEAECEVLKKIRH--RNLI-KVISSCSNDDFKAL 771 (790)
Q Consensus 703 ~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~~-------~~~~~~~~e~~~l~~~~h--~nlv-~l~~~~~~~~~~~l 771 (790)
.+.+|.|.++.||++.. .+++.|+||...+... .....+.+|.+++..+.+ +..+ +++.+ +.+..++
T Consensus 35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~~~l 112 (397)
T 2olc_A 35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVT 112 (397)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEE
T ss_pred EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCccEE
Confidence 46789999999999974 3568899998754321 012345678888876632 4444 44433 3455689
Q ss_pred EEecCCCC
Q 039514 772 VLEYMSNG 779 (790)
Q Consensus 772 v~e~~~~G 779 (790)
||||+++.
T Consensus 113 vmE~l~g~ 120 (397)
T 2olc_A 113 VMEDLSHL 120 (397)
T ss_dssp EECCCTTS
T ss_pred EEEeCCCc
Confidence 99999864
No 427
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=86.51 E-value=2.9 Score=41.09 Aligned_cols=77 Identities=12% Similarity=-0.008 Sum_probs=55.0
Q ss_pred eeccCCcE-EEEEEEE-cCCcEEEEEEecccchHHHHHHHHHHHHHhcCC-CCceeeEeeEEEeCCeEEEEEecCCCCCH
Q 039514 705 IIGRGGFG-SVYGARL-EDGMKIAIKVFHQQCASALKSFEAECEVLKKIR-HRNLIKVISSCSNDDFKALVLEYMSNGSL 781 (790)
Q Consensus 705 ~ig~g~~g-~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~~~-h~nlv~l~~~~~~~~~~~lv~e~~~~G~L 781 (790)
.+..|..| .||+... .++..+.||+-.... ..++.+|...|..+. +--+-++++++.+++..|+|||++++.++
T Consensus 31 ~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~~---~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~~~ 107 (272)
T 4gkh_A 31 RDNVGQSGATIYRLYGKPNAPELFLKHGKGSV---ANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKTA 107 (272)
T ss_dssp EEECSSSSCEEEEEECCTTCCCEEEEEEETHH---HHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSEEH
T ss_pred EccCCCcCCeEEEEEecCCCeEEEEEECCCCC---HhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCccc
Confidence 44555555 6898773 456778999876542 345778888887774 22245688888888999999999999777
Q ss_pred HHH
Q 039514 782 GDW 784 (790)
Q Consensus 782 ~~~ 784 (790)
.+.
T Consensus 108 ~~~ 110 (272)
T 4gkh_A 108 FQV 110 (272)
T ss_dssp HHH
T ss_pred ccc
Confidence 654
No 428
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=86.43 E-value=1.3 Score=45.02 Aligned_cols=74 Identities=12% Similarity=0.180 Sum_probs=52.8
Q ss_pred CccccceeccCCcEEEEEEEEcCCcEEEEEEecccchHHHHHHHHHHHHHhcCCC---Cc-eeeEeeEEEeCCeEEEEEe
Q 039514 699 NFAENNIIGRGGFGSVYGARLEDGMKIAIKVFHQQCASALKSFEAECEVLKKIRH---RN-LIKVISSCSNDDFKALVLE 774 (790)
Q Consensus 699 ~~~~~~~ig~g~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~~~h---~n-lv~l~~~~~~~~~~~lv~e 774 (790)
.+...+.++.|..+.||+. |+.+++|...... ....+.+|.+++..+.+ +- +.+++++ +..|+|||
T Consensus 38 ~i~~v~~l~~G~~n~vy~v----g~~~vlR~~~~~~--~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~----~~~~lvme 107 (320)
T 3r70_A 38 KINELRYLSSGDDSDTFLC----NEQYVVKVPKRDS--VRISQKRELELYRFLENCKLSYQIPAVVYQ----SDRFNIMK 107 (320)
T ss_dssp CCSCEEEEEECSSEEEEEE----TTTEEEEEESSHH--HHHHHHHHHHHHHHHTTSCCSSBCCCEEEE----CSSCEEEE
T ss_pred ceEEEEeCCCCCCceEEEE----CCEEEEEeCCcHH--HHHHHHHHHHHHHHHHhcCCCCCcceEEec----CCcEEEEe
Confidence 4556678999999999987 6778888775432 13457889988887765 21 2334443 56689999
Q ss_pred cCCCCCHH
Q 039514 775 YMSNGSLG 782 (790)
Q Consensus 775 ~~~~G~L~ 782 (790)
|++|..+.
T Consensus 108 ~i~G~~l~ 115 (320)
T 3r70_A 108 YIKGERIT 115 (320)
T ss_dssp CCCCBCCC
T ss_pred ecCCcccc
Confidence 99998775
No 429
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=84.17 E-value=2.9 Score=43.30 Aligned_cols=75 Identities=9% Similarity=0.112 Sum_probs=54.2
Q ss_pred cccceeccCCcEEEEEEEEcCCcEEEEEEecccchHHHHHHHHHHHHHhcCCCCc--eeeEeeEEEeC-CeEEEEEecCC
Q 039514 701 AENNIIGRGGFGSVYGARLEDGMKIAIKVFHQQCASALKSFEAECEVLKKIRHRN--LIKVISSCSND-DFKALVLEYMS 777 (790)
Q Consensus 701 ~~~~~ig~g~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~~~h~n--lv~l~~~~~~~-~~~~lv~e~~~ 777 (790)
...+.++.|....+|+... +++.+++|..... ..+.+|..++..+.... +.++++++... +..|+||||++
T Consensus 44 ~~i~~l~gG~~n~~y~v~~-~g~~~vlK~~~~~-----~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~g~~~lv~e~l~ 117 (362)
T 3ovc_A 44 SDLMQLSEGEESRAFSFDV-GGRGYVLRVNSCA-----DGFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCISRRAQ 117 (362)
T ss_dssp EEEEEEEECSSEEEEEEEE-TTEEEEEEEESCC-----HHHHHHHHHHHHHCCSSSCCCCEEEEEESSSSCEEEEEECCC
T ss_pred ceEEECCCCCcceEEEEEE-CCcEEEEEeCCch-----hhHHHHHHHHHHHHhcCCCCceEEEeccCCCCCeEEEEEecC
Confidence 3456789999999998875 5788999987653 24677888887775433 34566666654 56899999999
Q ss_pred CCCH
Q 039514 778 NGSL 781 (790)
Q Consensus 778 ~G~L 781 (790)
+..+
T Consensus 118 G~~l 121 (362)
T 3ovc_A 118 GVTL 121 (362)
T ss_dssp SEET
T ss_pred CCCc
Confidence 7554
No 430
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=82.93 E-value=2.5 Score=42.54 Aligned_cols=75 Identities=11% Similarity=0.061 Sum_probs=53.4
Q ss_pred cceeccCCcEEEEEEEEcCCcEEEEEEecccchHHHHHHHHHHHHHhcCCCC---ceeeEeeEEE-eCCeEEEEEecCCC
Q 039514 703 NNIIGRGGFGSVYGARLEDGMKIAIKVFHQQCASALKSFEAECEVLKKIRHR---NLIKVISSCS-NDDFKALVLEYMSN 778 (790)
Q Consensus 703 ~~~ig~g~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~~~h~---nlv~l~~~~~-~~~~~~lv~e~~~~ 778 (790)
.+.++.|....||+. |+.++||.... ......+.+|.+++..+.+. -+.+.+.++. ..+..++||||++|
T Consensus 24 v~~l~~G~~n~v~~v----g~~~VlR~~~~--~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~G 97 (306)
T 3tdw_A 24 VESLGEGFRNYAILV----NGDWVFRFPKS--QQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQG 97 (306)
T ss_dssp EEEEEECSSEEEEEE----TTTEEEEEESS--HHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCCS
T ss_pred eeecCCCcceeEEEE----CCEEEEEecCC--chHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccCC
Confidence 466889999999987 56788887532 22345688999999988642 2345565654 34567899999998
Q ss_pred CCHHH
Q 039514 779 GSLGD 783 (790)
Q Consensus 779 G~L~~ 783 (790)
..+.+
T Consensus 98 ~~l~~ 102 (306)
T 3tdw_A 98 QILGE 102 (306)
T ss_dssp EECHH
T ss_pred eECch
Confidence 77765
No 431
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=76.53 E-value=1 Score=46.63 Aligned_cols=80 Identities=9% Similarity=0.012 Sum_probs=52.7
Q ss_pred ccee-ccCCcEEEEEEEEc-------CCcEEEEEEecccc---hHHHHHHHHHHHHHhcCC-C--CceeeEeeEEEeC--
Q 039514 703 NNII-GRGGFGSVYGARLE-------DGMKIAIKVFHQQC---ASALKSFEAECEVLKKIR-H--RNLIKVISSCSND-- 766 (790)
Q Consensus 703 ~~~i-g~g~~g~v~~~~~~-------~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~~~-h--~nlv~l~~~~~~~-- 766 (790)
.+.| +.|..+.+|+.... +++.+++|...... ......+.+|..++..+. + -.+.++++++.+.
T Consensus 25 ~~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~ 104 (357)
T 3ats_A 25 ESGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDV 104 (357)
T ss_dssp EEEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTT
T ss_pred EEECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCc
Confidence 4567 88999999987754 26678888875432 101134567777777663 2 2355677776554
Q ss_pred -CeEEEEEecCCCCCHH
Q 039514 767 -DFKALVLEYMSNGSLG 782 (790)
Q Consensus 767 -~~~~lv~e~~~~G~L~ 782 (790)
+..|+||||+++..+.
T Consensus 105 ~g~~~~v~e~l~G~~l~ 121 (357)
T 3ats_A 105 LGTPFFLMDYVEGVVPP 121 (357)
T ss_dssp TSSCEEEEECCCCBCCC
T ss_pred cCCceEEEEecCCCChh
Confidence 3568999999986553
No 432
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=74.17 E-value=0.33 Score=52.35 Aligned_cols=60 Identities=10% Similarity=0.050 Sum_probs=17.2
Q ss_pred cceeccCCcEEEEEEEEcC-CcEEEE------EEecccch--HHHHHHHHHHHHHhcCCCCceeeEeeEEEe
Q 039514 703 NNIIGRGGFGSVYGARLED-GMKIAI------KVFHQQCA--SALKSFEAECEVLKKIRHRNLIKVISSCSN 765 (790)
Q Consensus 703 ~~~ig~g~~g~v~~~~~~~-~~~vav------K~~~~~~~--~~~~~~~~e~~~l~~~~h~nlv~l~~~~~~ 765 (790)
.+.+| ||.||+|.+.. ..+||| |..+.+.. .....|.+|..++...+|||+++.+++...
T Consensus 147 ~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~~ 215 (463)
T 3cxl_A 147 YEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFKVH 215 (463)
T ss_dssp TTTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEEEE
T ss_pred cccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceEEe
Confidence 34555 99999999653 367888 76654322 223468899999999999999998887643
No 433
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=70.61 E-value=3.1 Score=41.73 Aligned_cols=75 Identities=16% Similarity=0.155 Sum_probs=50.3
Q ss_pred cceeccCCcEEEEEEEEcCCcEEEEEEecccchHHHHHHHHHHHHHhcCC-CCce--eeEeeEEEeCC---eEEEEEecC
Q 039514 703 NNIIGRGGFGSVYGARLEDGMKIAIKVFHQQCASALKSFEAECEVLKKIR-HRNL--IKVISSCSNDD---FKALVLEYM 776 (790)
Q Consensus 703 ~~~ig~g~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~~~-h~nl--v~l~~~~~~~~---~~~lv~e~~ 776 (790)
.+.++.|....||+.. ..+++|..... .....+.+|.+++..+. +..+ .+.++.....+ ..|+||||+
T Consensus 25 i~~~~~G~~n~v~~v~----~~~vlR~~~~~--~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~i 98 (304)
T 3sg8_A 25 IEISGEGNDCIAYEIN----RDFIFKFPKHS--RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTKI 98 (304)
T ss_dssp CCEEEECSSEEEEEST----TSEEEEEESSH--HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEECC
T ss_pred eEecCCCCcceEEEEC----CEEEEEecCCc--chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEccc
Confidence 4568999999999753 56888886543 23456788999998773 3332 33444433332 458999999
Q ss_pred CCCCHHH
Q 039514 777 SNGSLGD 783 (790)
Q Consensus 777 ~~G~L~~ 783 (790)
+|..+.+
T Consensus 99 ~G~~l~~ 105 (304)
T 3sg8_A 99 KGVPLTP 105 (304)
T ss_dssp CCEECCH
T ss_pred CCeECCc
Confidence 9977654
No 434
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=64.48 E-value=11 Score=38.18 Aligned_cols=73 Identities=11% Similarity=0.201 Sum_probs=40.8
Q ss_pred ceeccCCcEEEEEEEEcCCcEEEEEEecccchHHHHHHHHHHHHHhcC-----CCCceeeEe-e--EEEeCCeEEEEEec
Q 039514 704 NIIGRGGFGSVYGARLEDGMKIAIKVFHQQCASALKSFEAECEVLKKI-----RHRNLIKVI-S--SCSNDDFKALVLEY 775 (790)
Q Consensus 704 ~~ig~g~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~~-----~h~nlv~l~-~--~~~~~~~~~lv~e~ 775 (790)
+.++.|..+.||+....+| .+++|+..... .+...|..++..+ ..|.++.-. | +...++..++||||
T Consensus 38 ~~l~gG~~n~~~~v~~~~~-~~vlk~~~~~~----~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~~~ 112 (346)
T 2q83_A 38 DVIQGNQMALVWKVHTDSG-AVCLKRIHRPE----KKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVYDW 112 (346)
T ss_dssp EECC----CEEEEEEETTE-EEEEEEECSCH----HHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEEEC
T ss_pred eeccccccCcEEEEEeCCC-CEEEEecCCCH----HHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEEEe
Confidence 4566677889999887655 58899987632 1222334443333 334444311 1 12346778999999
Q ss_pred CCCCCH
Q 039514 776 MSNGSL 781 (790)
Q Consensus 776 ~~~G~L 781 (790)
++|..+
T Consensus 113 i~G~~~ 118 (346)
T 2q83_A 113 IEGRPF 118 (346)
T ss_dssp CCCBCC
T ss_pred ecCccC
Confidence 998654
No 435
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=59.50 E-value=20 Score=36.00 Aligned_cols=75 Identities=11% Similarity=0.124 Sum_probs=46.4
Q ss_pred ceeccCCcEEEEEEEEcCCcEEEEEEecccchHHHHHHHHHHHHHhcCCCCc--eeeEeeE-----EEeCCeEEEEEecC
Q 039514 704 NIIGRGGFGSVYGARLEDGMKIAIKVFHQQCASALKSFEAECEVLKKIRHRN--LIKVISS-----CSNDDFKALVLEYM 776 (790)
Q Consensus 704 ~~ig~g~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~~~h~n--lv~l~~~-----~~~~~~~~lv~e~~ 776 (790)
..++ |....||+....+|+.+++|....... ....+..|..++..+.... +.+++.. ...++..++||||+
T Consensus 32 ~~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~~-~~~~~~~E~~~~~~L~~~g~~vp~~~~~~g~~~~~~~g~~~~l~~~i 109 (328)
T 1zyl_A 32 TPLN-SYENRVYQFQDEDRRRFVVKFYRPERW-TADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPSV 109 (328)
T ss_dssp EEEC-CSSSEEEEECCTTCCCEEEEEECTTTS-CHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEECC
T ss_pred Eeec-CcccceEEEEcCCCCEEEEEEcCCCCC-CHHHHHHHHHHHHHHHHcCCeecceeecCCcEEEEECCEEEEEEEec
Confidence 4566 778899988776777899999874321 1234556666666553111 2333332 22355678899999
Q ss_pred CCCC
Q 039514 777 SNGS 780 (790)
Q Consensus 777 ~~G~ 780 (790)
+|..
T Consensus 110 ~G~~ 113 (328)
T 1zyl_A 110 GGRQ 113 (328)
T ss_dssp CCEE
T ss_pred CCCC
Confidence 8743
No 436
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=54.60 E-value=15 Score=36.90 Aligned_cols=90 Identities=7% Similarity=0.021 Sum_probs=48.8
Q ss_pred cCHHHHHHHhcCccc-----cceeccCCcEEEEEEEEcCCcEEEEEEecccchHHHHHHHHHHHHHhcCC-----CCcee
Q 039514 688 FSYLELLQATDNFAE-----NNIIGRGGFGSVYGARLEDGMKIAIKVFHQQCASALKSFEAECEVLKKIR-----HRNLI 757 (790)
Q Consensus 688 ~~~~~~~~~~~~~~~-----~~~ig~g~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~~~-----h~nlv 757 (790)
++.+++......|.. .+.|+.|....+|+....+| .+++|...... ...++..|+.++..+. -|.++
T Consensus 7 ~~~~~l~~~l~~~~~~~~~~~~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~~--~~~~l~~e~~~l~~L~~~g~~vP~~~ 83 (322)
T 2ppq_A 7 ITEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTTKD-PLILTLYEKRV--EKNDLPFFLGLMQHLAAKGLSCPLPL 83 (322)
T ss_dssp CCHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEESSC-CEEEEEECC-----CCHHHHHHHHHHHHHHTTCCCCCBC
T ss_pred CCHHHHHHHHHhCCCCcceEeeccCCCcccceEEEEeCCc-cEEEEEeCCCC--CHHHHHHHHHHHHHHHHCCCCCCccc
Confidence 444555555555543 34567788899999887665 67888886521 1123445666665542 23333
Q ss_pred eEe-e--EEEeCCeEEEEEecCCCCC
Q 039514 758 KVI-S--SCSNDDFKALVLEYMSNGS 780 (790)
Q Consensus 758 ~l~-~--~~~~~~~~~lv~e~~~~G~ 780 (790)
... | +....+..+++++|++|..
T Consensus 84 ~~~~g~~~~~~~g~~~~l~~~l~G~~ 109 (322)
T 2ppq_A 84 PRKDGELLGELSGRPAALISFLEGMW 109 (322)
T ss_dssp CBTTCCSCEEETTEEEEEEECCCCBC
T ss_pred CCCCCCEEEEECCEEEEEEEeCCCcC
Confidence 210 1 1122456789999999754
No 437
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=43.69 E-value=46 Score=26.64 Aligned_cols=45 Identities=20% Similarity=0.157 Sum_probs=21.7
Q ss_pred ccccCcccccCCcccCeeeCCCCcccccCCccccCCCCCCEEECCC
Q 039514 516 LSGDMPATIGGLKDLQFMDLAYNRLEGPIPESFGDLTSLEVLNLSK 561 (790)
Q Consensus 516 l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 561 (790)
++.+-...|.++.+|+.+.+..+ ++.+...+|.++.+|+.+.+.+
T Consensus 8 vt~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~ 52 (100)
T 2lz0_A 8 VVGMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTG 52 (100)
T ss_dssp CCSSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECC
T ss_pred cCEecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcC
Confidence 33344445555555555555443 3334444555555555555543
No 438
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=41.12 E-value=26 Score=28.11 Aligned_cols=18 Identities=6% Similarity=-0.092 Sum_probs=7.6
Q ss_pred cCChhhhCCCCCCEEeCC
Q 039514 92 SVPSSIYTMHTLKFLDFT 109 (790)
Q Consensus 92 ~~~~~~~~l~~L~~L~Ls 109 (790)
+...+|.++..|+.+.+-
T Consensus 11 I~~~aF~~c~~L~~i~iP 28 (100)
T 2lz0_A 11 MDKSLFAGNTVIREITVQ 28 (100)
T ss_dssp SCSCTTTTCTTCCCEEEC
T ss_pred ecHHHhcCCCCCcEEEcC
Confidence 334444444444444443
No 439
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=35.58 E-value=34 Score=35.89 Aligned_cols=74 Identities=14% Similarity=0.087 Sum_probs=43.2
Q ss_pred ccceeccCCcEEEEEEEEcCCcEEEEEEeccc--------c-hHHHHHHHHHHHHHh-cCCCCceeeEeeEEEeCCeEEE
Q 039514 702 ENNIIGRGGFGSVYGARLEDGMKIAIKVFHQQ--------C-ASALKSFEAECEVLK-KIRHRNLIKVISSCSNDDFKAL 771 (790)
Q Consensus 702 ~~~~ig~g~~g~v~~~~~~~~~~vavK~~~~~--------~-~~~~~~~~~e~~~l~-~~~h~nlv~l~~~~~~~~~~~l 771 (790)
..+.+|.|..+.||++.. +++.++||...+. . ......+..|+..+. ...+..+.+++.+. .+..++
T Consensus 38 ~i~~l~~G~~n~vyrv~~-~~~~~vvK~~~p~~~~~~~~~~~~~~~~~~E~e~l~~~~~~~~~~vP~v~~~~--~~~~~l 114 (420)
T 2pyw_A 38 VIKEVGDGNLNFVFIVVG-SSGSLVIKQALPYIRCIGESWPMTKERAYFEATTLRKHGNLSPDHVPEVYHFD--RTMALI 114 (420)
T ss_dssp EEEECCCSSSCEEEEEEC-SSCEEEEEECCSBCTTTCTTSBCCTTHHHHHHHHHHHHHHHSGGGSCCEEEEE--TTTTEE
T ss_pred EEEEccCCCcEEEEEEEc-CCceEEEEECchhhcccCcccccchhHHHHHHHHHHHHHhhCCCCCCeEEEEC--CCccEE
Confidence 346789999999998864 4678999943211 0 001223333433222 11223445555554 466789
Q ss_pred EEecC-CC
Q 039514 772 VLEYM-SN 778 (790)
Q Consensus 772 v~e~~-~~ 778 (790)
||||+ ++
T Consensus 115 v~e~l~~g 122 (420)
T 2pyw_A 115 GMRYLEPP 122 (420)
T ss_dssp EECCCCTT
T ss_pred EEeecCCc
Confidence 99999 76
No 440
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=33.88 E-value=44 Score=35.18 Aligned_cols=72 Identities=19% Similarity=0.260 Sum_probs=47.4
Q ss_pred cceeccCCcEEEEEEEEcC--------CcEEEEEEecccchHHHHHHHHHHHHHhcCCCCce-eeEeeEEEeCCeEEEEE
Q 039514 703 NNIIGRGGFGSVYGARLED--------GMKIAIKVFHQQCASALKSFEAECEVLKKIRHRNL-IKVISSCSNDDFKALVL 773 (790)
Q Consensus 703 ~~~ig~g~~g~v~~~~~~~--------~~~vavK~~~~~~~~~~~~~~~e~~~l~~~~h~nl-v~l~~~~~~~~~~~lv~ 773 (790)
.+.|+.|....||++...+ ++.|.+|+...... ...+.+|..++..+...++ .++++.+. + .+|+
T Consensus 78 v~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~~~--~~~li~E~~~l~~L~~~g~~P~l~~~~~--~--g~v~ 151 (429)
T 1nw1_A 78 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNPET--ESHLVAESVIFTLLSERHLGPKLYGIFS--G--GRLE 151 (429)
T ss_dssp EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSCCC--HHHHHHHHHHHHHHHHTTSSSCEEEEET--T--EEEE
T ss_pred EEEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCCCc--HHHHHHHHHHHHHHHhCCCCCcEEEEeC--C--CEEE
Confidence 3568888899999998753 47888988844211 1345578888877743334 45666543 2 3899
Q ss_pred ecCCCCC
Q 039514 774 EYMSNGS 780 (790)
Q Consensus 774 e~~~~G~ 780 (790)
||+++..
T Consensus 152 e~l~G~~ 158 (429)
T 1nw1_A 152 EYIPSRP 158 (429)
T ss_dssp CCCCEEE
T ss_pred EEeCCcc
Confidence 9998633
No 441
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=26.98 E-value=90 Score=31.16 Aligned_cols=78 Identities=8% Similarity=0.092 Sum_probs=38.7
Q ss_pred ceeccCCcEE-EEEEEEcCCcEEEEEEecccchHHHHHHHHHHHHHhcCC-C-CceeeEeeEEEeCCeEEEEEecCCCCC
Q 039514 704 NIIGRGGFGS-VYGARLEDGMKIAIKVFHQQCASALKSFEAECEVLKKIR-H-RNLIKVISSCSNDDFKALVLEYMSNGS 780 (790)
Q Consensus 704 ~~ig~g~~g~-v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~~~-h-~nlv~l~~~~~~~~~~~lv~e~~~~G~ 780 (790)
+.++.|+... +|+....+|+.+++|....... .++..|+.++..+. + -.+.+++.+..+.+ ++|||++.+..
T Consensus 24 ~~l~gg~s~~~~~r~~~~~~~~~vlk~~~~~~~---~~~~~e~~~l~~L~~~g~~vP~v~~~d~~~g--~ll~e~l~~~~ 98 (333)
T 3csv_A 24 TPLAGDASSRRYQRLRSPTGAKAVLMDWSPEEG---GDTQPFVDLAQYLRNLDISAPEIYAEEHARG--LLLIEDLGDAL 98 (333)
T ss_dssp CC--------CCEEEECTTCCEEEEEECCTTTT---CCSHHHHHHHHHHHHTTCBCCCEEEEETTTT--EEEECCCCSCB
T ss_pred eECCCCCCCceEEEEEcCCCCeEEEEECCCCCC---ccccHHHHHHHHHHhCCCCCCceeeecCCCC--EEEEeeCCCcc
Confidence 3455555444 5565544467777776554321 12234555555442 1 12344555543333 78999998777
Q ss_pred HHHHHh
Q 039514 781 LGDWLH 786 (790)
Q Consensus 781 L~~~l~ 786 (790)
+.+++.
T Consensus 99 l~~~l~ 104 (333)
T 3csv_A 99 FTEVIN 104 (333)
T ss_dssp HHHHHH
T ss_pred hHHHhc
Confidence 776664
No 442
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=25.30 E-value=49 Score=34.14 Aligned_cols=73 Identities=11% Similarity=0.225 Sum_probs=41.7
Q ss_pred ceeccCCcEEEEEEEEc--------CCcEEEEEEecccchHHHHHHHHHHHHHhcCCCCce-eeEeeEEEeCCeEEEEEe
Q 039514 704 NIIGRGGFGSVYGARLE--------DGMKIAIKVFHQQCASALKSFEAECEVLKKIRHRNL-IKVISSCSNDDFKALVLE 774 (790)
Q Consensus 704 ~~ig~g~~g~v~~~~~~--------~~~~vavK~~~~~~~~~~~~~~~e~~~l~~~~h~nl-v~l~~~~~~~~~~~lv~e 774 (790)
+.+..|.-..+|++... +++.|.+|+..... .....+.+|.++++.+.-..+ .++++++.. .+|||
T Consensus 56 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~~-~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~----g~v~e 130 (379)
T 3feg_A 56 YPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAIL-QGVDSLVLESVMFAILAERSLGPQLYGVFPE----GRLEQ 130 (379)
T ss_dssp EEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC----CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT----EEEEE
T ss_pred EEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCcc-chHHHHHHHHHHHHHHHhcCCCCeEEEEcCC----ccEEE
Confidence 45666777888988764 24688888864421 123445688888877742223 455655532 28999
Q ss_pred cCCCCCH
Q 039514 775 YMSNGSL 781 (790)
Q Consensus 775 ~~~~G~L 781 (790)
|++|..+
T Consensus 131 ~i~G~~l 137 (379)
T 3feg_A 131 YIPSRPL 137 (379)
T ss_dssp CCSEEEC
T ss_pred EecCccC
Confidence 9987543
No 443
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=24.17 E-value=44 Score=32.96 Aligned_cols=69 Identities=10% Similarity=0.079 Sum_probs=40.1
Q ss_pred cceeccCCcEEEEEEEEcCCcEEEEEEecccchHHHHHHHHHHHHHhcCCCCce-eeEeeEEEeCCeEEEEEecCCCC
Q 039514 703 NNIIGRGGFGSVYGARLEDGMKIAIKVFHQQCASALKSFEAECEVLKKIRHRNL-IKVISSCSNDDFKALVLEYMSNG 779 (790)
Q Consensus 703 ~~~ig~g~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~~~h~nl-v~l~~~~~~~~~~~lv~e~~~~G 779 (790)
.+.++.|....+|+. +.+.+|......... ....+|..++..+....+ .+++++ ..+.-++|+||++.|
T Consensus 23 i~~l~gG~tN~~~~~-----~~~vlR~~~~~~~~~-~~r~~E~~~l~~l~~~g~~P~~~~~--~~~~~~~v~e~i~~g 92 (301)
T 3dxq_A 23 PLERLGGLTNLVFRA-----GDLCLRIPGKGTEEY-INRANEAVAAREAAKAGVSPEVLHV--DPATGVMVTRYIAGA 92 (301)
T ss_dssp CEEEESCSSEEEEEE-----TTEEEEEECC----C-CCHHHHHHHHHHHHHTTSSCCEEEE--CTTTCCEEEECCTTC
T ss_pred eeEcCCcccccccee-----eeEEEECCCCCccce-eCHHHHHHHHHHHHHcCCCCceEEE--ECCCCEEEEeecCCC
Confidence 678999999999988 567888776532110 112356666655532223 234443 333457899999433
Done!