BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 039516
(345 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 76/244 (31%), Positives = 128/244 (52%), Gaps = 30/244 (12%)
Query: 43 GKFPNEQEVAIKRLAWTSGQG-RVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEF 101
G+ + VA+KRL QG ++FQ E ++I+ + NL++L G + ERLLVY +
Sbjct: 57 GRLADGTLVAVKRLKEERXQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPY 116
Query: 102 MPNKSLDSSFS-------------------GTFKDLLCLHKYSRLRVIHRDLKASNILLD 142
M N S+ S G+ + L LH + ++IHRD+KA+NILLD
Sbjct: 117 MANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLD 176
Query: 143 DQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLK 202
++ + DFG+A++ + + GT G+++ EY +G S KTDVFG+GV++L+
Sbjct: 177 EEFEAVVGDFGLAKLMDYKDXHVXXA-VRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLE 235
Query: 203 IVCGKKNNKSYHTERPLNLVGIAWQLWNEG----KDLE-LIDLTLDGSCPPNE-DAFLLV 256
++ G+ +++ R N + W +G K LE L+D+ L G+ E + + V
Sbjct: 236 LITGQ---RAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQV 292
Query: 257 SCVC 260
+ +C
Sbjct: 293 ALLC 296
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 110 bits (276), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 75/244 (30%), Positives = 127/244 (52%), Gaps = 30/244 (12%)
Query: 43 GKFPNEQEVAIKRLAWTSGQG-RVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEF 101
G+ + VA+KRL QG ++FQ E ++I+ + NL++L G + ERLLVY +
Sbjct: 49 GRLADGXLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPY 108
Query: 102 MPNKSLDSSFS-------------------GTFKDLLCLHKYSRLRVIHRDLKASNILLD 142
M N S+ S G+ + L LH + ++IHRD+KA+NILLD
Sbjct: 109 MANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLD 168
Query: 143 DQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLK 202
++ + DFG+A++ + + G G+++ EY +G S KTDVFG+GV++L+
Sbjct: 169 EEFEAVVGDFGLAKLMDYKDXHVXXA-VRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLE 227
Query: 203 IVCGKKNNKSYHTERPLNLVGIAWQLWNEG----KDLE-LIDLTLDGSCPPNE-DAFLLV 256
++ G+ +++ R N + W +G K LE L+D+ L G+ E + + V
Sbjct: 228 LITGQ---RAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQV 284
Query: 257 SCVC 260
+ +C
Sbjct: 285 ALLC 288
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 107 bits (268), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 71/187 (37%), Positives = 105/187 (56%), Gaps = 32/187 (17%)
Query: 45 FPNEQEVAIKRLAW----TSGQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYE 100
+ N VA+K+LA T+ + + +F E K++AK Q+ NLV+LLG S G++ LVY
Sbjct: 51 YVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYV 110
Query: 101 FMPNKSLDSSFS------------------GTFKDLLCLHKYSRLRVIHRDLKASNILLD 142
+MPN SL S G + LH+ IHRD+K++NILLD
Sbjct: 111 YMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLD 167
Query: 143 DQLNTKISDFGMARIFGVNESGANT---NRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVL 199
+ KISDFG+AR +E A T +RIVGT YM+ E + G ++ K+D++ FGV+
Sbjct: 168 EAFTAKISDFGLAR---ASEKFAQTVMXSRIVGTTAYMAPE-ALRGEITPKSDIYSFGVV 223
Query: 200 VLKIVCG 206
+L+I+ G
Sbjct: 224 LLEIITG 230
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 71/187 (37%), Positives = 104/187 (55%), Gaps = 32/187 (17%)
Query: 45 FPNEQEVAIKRLAW----TSGQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYE 100
+ N VA+K+LA T+ + + +F E K++AK Q+ NLV+LLG S G++ LVY
Sbjct: 51 YVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYV 110
Query: 101 FMPNKSLDSSFS------------------GTFKDLLCLHKYSRLRVIHRDLKASNILLD 142
+MPN SL S G + LH+ IHRD+K++NILLD
Sbjct: 111 YMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLD 167
Query: 143 DQLNTKISDFGMARIFGVNESGANT---NRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVL 199
+ KISDFG+AR +E A T RIVGT YM+ E + G ++ K+D++ FGV+
Sbjct: 168 EAFTAKISDFGLAR---ASEKFAQTVMXXRIVGTTAYMAPE-ALRGEITPKSDIYSFGVV 223
Query: 200 VLKIVCG 206
+L+I+ G
Sbjct: 224 LLEIITG 230
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 68/184 (36%), Positives = 100/184 (54%), Gaps = 26/184 (14%)
Query: 45 FPNEQEVAIKRLAW----TSGQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYE 100
+ N VA+K+LA T+ + + +F E K++AK Q+ NLV+LLG S G++ LVY
Sbjct: 45 YVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYV 104
Query: 101 FMPNKSLDSSFS------------------GTFKDLLCLHKYSRLRVIHRDLKASNILLD 142
+MPN SL S G + LH+ IHRD+K++NILLD
Sbjct: 105 YMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLD 161
Query: 143 DQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLK 202
+ KISDFG+AR RIVGT YM+ E + G ++ K+D++ FGV++L+
Sbjct: 162 EAFTAKISDFGLARASEKFAQXVMXXRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLE 220
Query: 203 IVCG 206
I+ G
Sbjct: 221 IITG 224
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 102 bits (253), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 66/184 (35%), Positives = 98/184 (53%), Gaps = 26/184 (14%)
Query: 45 FPNEQEVAIKRLAW----TSGQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYE 100
+ N VA+K+LA T+ + + +F E K+ AK Q+ NLV+LLG S G++ LVY
Sbjct: 42 YVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYV 101
Query: 101 FMPNKSLDSSFS------------------GTFKDLLCLHKYSRLRVIHRDLKASNILLD 142
+ PN SL S G + LH+ IHRD+K++NILLD
Sbjct: 102 YXPNGSLLDRLSCLDGTPPLSWHXRCKIAQGAANGINFLHENHH---IHRDIKSANILLD 158
Query: 143 DQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLK 202
+ KISDFG+AR +RIVGT Y + E + G ++ K+D++ FGV++L+
Sbjct: 159 EAFTAKISDFGLARASEKFAQXVXXSRIVGTTAYXAPE-ALRGEITPKSDIYSFGVVLLE 217
Query: 203 IVCG 206
I+ G
Sbjct: 218 IITG 221
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 112/225 (49%), Gaps = 22/225 (9%)
Query: 43 GKFPNEQEVAIKRLAWTSGQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFM 102
G + +VA+KR S QG EF+ E + ++ ++ +LV L+G E +L+Y++M
Sbjct: 58 GVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYM 117
Query: 103 PNKSLDSSFSGTFKDL------------LC------LHKYSRLRVIHRDLKASNILLDDQ 144
N +L G+ DL +C LH +IHRD+K+ NILLD+
Sbjct: 118 ENGNLKRHLYGS--DLPTMSMSWEQRLEICIGAARGLHYLHTRAIIHRDVKSINILLDEN 175
Query: 145 LNTKISDFGMARIFGVNESGANTNRIV-GTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKI 203
KI+DFG+++ G + +V GT GY+ EY + G ++ K+DV+ FGV++ ++
Sbjct: 176 FVPKITDFGISKK-GTELDQTHLXXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEV 234
Query: 204 VCGKKNNKSYHTERPLNLVGIAWQLWNEGKDLELIDLTLDGSCPP 248
+C + +NL A + N G+ +++D L P
Sbjct: 235 LCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPNLADKIRP 279
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 84.3 bits (207), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 112/225 (49%), Gaps = 22/225 (9%)
Query: 43 GKFPNEQEVAIKRLAWTSGQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFM 102
G + +VA+KR S QG EF+ E + ++ ++ +LV L+G E +L+Y++M
Sbjct: 58 GVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYM 117
Query: 103 PNKSLDSSFSGTFKDL------------LC------LHKYSRLRVIHRDLKASNILLDDQ 144
N +L G+ DL +C LH +IHRD+K+ NILLD+
Sbjct: 118 ENGNLKRHLYGS--DLPTMSMSWEQRLEICIGAARGLHYLHTRAIIHRDVKSINILLDEN 175
Query: 145 LNTKISDFGMARIFGVNESGANTNRIV-GTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKI 203
KI+DFG+++ G + +V GT GY+ EY + G ++ K+DV+ FGV++ ++
Sbjct: 176 FVPKITDFGISKK-GTELGQTHLXXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEV 234
Query: 204 VCGKKNNKSYHTERPLNLVGIAWQLWNEGKDLELIDLTLDGSCPP 248
+C + +NL A + N G+ +++D L P
Sbjct: 235 LCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPNLADKIRP 279
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 92/183 (50%), Gaps = 25/183 (13%)
Query: 44 KFPNEQEVAIKRLAWTSG---QGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYE 100
+ P +++V + A +G + R +F +EA ++ + + N+++L G G ++V E
Sbjct: 71 RVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTE 130
Query: 101 FMPNKSLDS------------SFSGTFKDLLCLHKY-SRLRVIHRDLKASNILLDDQLNT 147
+M N SLD+ G + + +Y S L +HRDL A N+L+D L
Sbjct: 131 YMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVC 190
Query: 148 KISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKT-----DVFGFGVLVLK 202
K+SDFG++R+ + A T T G + + +T ++ +T DV+ FGV++ +
Sbjct: 191 KVSDFGLSRVLEDDPDAAXTT----TGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWE 246
Query: 203 IVC 205
++
Sbjct: 247 VLA 249
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 92/183 (50%), Gaps = 25/183 (13%)
Query: 44 KFPNEQEVAIKRLAWTSG---QGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYE 100
+ P +++V + A +G + R +F +EA ++ + + N+++L G G ++V E
Sbjct: 71 RVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTE 130
Query: 101 FMPNKSLDS------------SFSGTFKDLLCLHKY-SRLRVIHRDLKASNILLDDQLNT 147
+M N SLD+ G + + +Y S L +HRDL A N+L+D L
Sbjct: 131 YMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVC 190
Query: 148 KISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKT-----DVFGFGVLVLK 202
K+SDFG++R+ + A T T G + + +T ++ +T DV+ FGV++ +
Sbjct: 191 KVSDFGLSRVLEDDPDAAYTT----TGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWE 246
Query: 203 IVC 205
++
Sbjct: 247 VLA 249
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 104/210 (49%), Gaps = 41/210 (19%)
Query: 44 KFPNEQE--VAIK--RLAWTSGQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVY 99
K P+++E VAIK ++ +T Q R +F EA ++ + + N+++L G + ++V
Sbjct: 67 KLPSKKEISVAIKTLKVGYTEKQRR-DFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVT 125
Query: 100 EFMPNKSLDS------------SFSGTFKDLLCLHKY-SRLRVIHRDLKASNILLDDQLN 146
E+M N SLDS G + + KY S + +HRDL A NIL++ L
Sbjct: 126 EYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLV 185
Query: 147 TKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIK-----TDVFGFGVLVL 201
K+SDFG+AR+ + A T R G + + +T ++ + +DV+ +G+++
Sbjct: 186 CKVSDFGLARVLEDDPEAAYTTR----GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLW 241
Query: 202 KIVCGKKNNKSYHTERPLNLVGIAWQLWNE 231
+++ + ERP W++ N+
Sbjct: 242 EVMS--------YGERPY------WEMSNQ 257
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 89/183 (48%), Gaps = 23/183 (12%)
Query: 40 ILVGKFPNEQEVAIKRLAWTSGQGRVE---FQNEAKLIAKLQYTNLVKLLGCSIHGEERL 96
+ +G + +VA+K L QG + F EA L+ +LQ+ LV+L + E
Sbjct: 35 VWMGYYNGHTKVAVKSLK----QGSMSPDAFLAEANLMKQLQHQRLVRLYAV-VTQEPIY 89
Query: 97 LVYEFMPNKSL------DSSFSGTFKDLLCLHK--------YSRLRVIHRDLKASNILLD 142
++ E+M N SL S T LL + IHRDL+A+NIL+
Sbjct: 90 IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVS 149
Query: 143 DQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLK 202
D L+ KI+DFG+AR+ NE A + + E GT +IK+DV+ FG+L+ +
Sbjct: 150 DTLSCKIADFGLARLIEDNEXTAREGAKFPI-KWTAPEAINYGTFTIKSDVWSFGILLTE 208
Query: 203 IVC 205
IV
Sbjct: 209 IVT 211
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 109/229 (47%), Gaps = 51/229 (22%)
Query: 35 TRDRVILVGKF----------PNEQE--VAIK--RLAWTSGQGRVEFQNEAKLIAKLQYT 80
T +RVI G+F P ++E VAIK ++ +T Q R +F EA ++ + +
Sbjct: 25 TIERVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRR-DFLGEASIMGQFDHP 83
Query: 81 NLVKLLGCSIHGEERLLVYEFMPNKSLDS------------SFSGTFKDLLCLHKY-SRL 127
N++ L G + ++V E+M N SLD+ G + + KY S +
Sbjct: 84 NIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTVIQLVGMLRGISAGMKYLSDM 143
Query: 128 RVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTV 187
+HRDL A NIL++ L K+SDFG++R+ + A T R G + + +T +
Sbjct: 144 GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR----GGKIPIRWTAPEAI 199
Query: 188 SIK-----TDVFGFGVLVLKIVCGKKNNKSYHTERPLNLVGIAWQLWNE 231
+ + +DV+ +G+++ ++V + ERP W++ N+
Sbjct: 200 AFRKFTSASDVWSYGIVMWEVVS--------YGERPY------WEMTNQ 234
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 89/183 (48%), Gaps = 23/183 (12%)
Query: 40 ILVGKFPNEQEVAIKRLAWTSGQGRVE---FQNEAKLIAKLQYTNLVKLLGCSIHGEERL 96
+ +G + +VA+K L QG + F EA L+ +LQ+ LV+L + E
Sbjct: 37 VWMGYYNGHTKVAVKSLK----QGSMSPDAFLAEANLMKQLQHQRLVRLYAV-VTQEPIY 91
Query: 97 LVYEFMPNKSL------DSSFSGTFKDLLCLHK--------YSRLRVIHRDLKASNILLD 142
++ E+M N SL S T LL + IHRDL+A+NIL+
Sbjct: 92 IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVS 151
Query: 143 DQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLK 202
D L+ KI+DFG+AR+ NE A + + E GT +IK+DV+ FG+L+ +
Sbjct: 152 DTLSCKIADFGLARLIEDNEXTAREGAKF-PIKWTAPEAINYGTFTIKSDVWSFGILLTE 210
Query: 203 IVC 205
IV
Sbjct: 211 IVT 213
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 89/183 (48%), Gaps = 23/183 (12%)
Query: 40 ILVGKFPNEQEVAIKRLAWTSGQGRVE---FQNEAKLIAKLQYTNLVKLLGCSIHGEERL 96
+ +G + +VA+K L QG + F EA L+ +LQ+ LV+L + E
Sbjct: 38 VWMGYYNGHTKVAVKSLK----QGSMSPDAFLAEANLMKQLQHQRLVRLYAV-VTQEPIY 92
Query: 97 LVYEFMPNKSL------DSSFSGTFKDLLCLHK--------YSRLRVIHRDLKASNILLD 142
++ E+M N SL S T LL + IHRDL+A+NIL+
Sbjct: 93 IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVS 152
Query: 143 DQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLK 202
D L+ KI+DFG+AR+ NE A + + E GT +IK+DV+ FG+L+ +
Sbjct: 153 DTLSCKIADFGLARLIEDNEXTAREGAKF-PIKWTAPEAINYGTFTIKSDVWSFGILLTE 211
Query: 203 IVC 205
IV
Sbjct: 212 IVT 214
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 89/183 (48%), Gaps = 23/183 (12%)
Query: 40 ILVGKFPNEQEVAIKRLAWTSGQGRVE---FQNEAKLIAKLQYTNLVKLLGCSIHGEERL 96
+ +G + +VA+K L QG + F EA L+ +LQ+ LV+L + E
Sbjct: 29 VWMGYYNGHTKVAVKSLK----QGSMSPDAFLAEANLMKQLQHQRLVRLYAV-VTQEPIY 83
Query: 97 LVYEFMPNKSL------DSSFSGTFKDLLCLHK--------YSRLRVIHRDLKASNILLD 142
++ E+M N SL S T LL + IHRDL+A+NIL+
Sbjct: 84 IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVS 143
Query: 143 DQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLK 202
D L+ KI+DFG+AR+ NE A + + E GT +IK+DV+ FG+L+ +
Sbjct: 144 DTLSCKIADFGLARLIEDNEXTAREGAKFPI-KWTAPEAINYGTFTIKSDVWSFGILLTE 202
Query: 203 IVC 205
IV
Sbjct: 203 IVT 205
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 89/183 (48%), Gaps = 23/183 (12%)
Query: 40 ILVGKFPNEQEVAIKRLAWTSGQGRVE---FQNEAKLIAKLQYTNLVKLLGCSIHGEERL 96
+ +G + +VA+K L QG + F EA L+ +LQ+ LV+L + E
Sbjct: 31 VWMGYYNGHTKVAVKSLK----QGSMSPDAFLAEANLMKQLQHQRLVRLYAV-VTQEPIY 85
Query: 97 LVYEFMPNKSL------DSSFSGTFKDLLCLHK--------YSRLRVIHRDLKASNILLD 142
++ E+M N SL S T LL + IHRDL+A+NIL+
Sbjct: 86 IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVS 145
Query: 143 DQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLK 202
D L+ KI+DFG+AR+ NE A + + E GT +IK+DV+ FG+L+ +
Sbjct: 146 DTLSCKIADFGLARLIEDNEXTAREGAKFPI-KWTAPEAINYGTFTIKSDVWSFGILLTE 204
Query: 203 IVC 205
IV
Sbjct: 205 IVT 207
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 104/210 (49%), Gaps = 41/210 (19%)
Query: 44 KFPNEQE--VAIK--RLAWTSGQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVY 99
K P+++E VAIK ++ +T Q R +F EA ++ + + N+++L G + ++V
Sbjct: 55 KLPSKKEISVAIKTLKVGYTEKQRR-DFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVT 113
Query: 100 EFMPNKSLDS------------SFSGTFKDLLCLHKY-SRLRVIHRDLKASNILLDDQLN 146
E+M N SLDS G + + KY S + +HRDL A NIL++ L
Sbjct: 114 EYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLV 173
Query: 147 TKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIK-----TDVFGFGVLVL 201
K+SDFG++R+ + A T R G + + +T ++ + +DV+ +G+++
Sbjct: 174 CKVSDFGLSRVLEDDPEAAYTTR----GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLW 229
Query: 202 KIVCGKKNNKSYHTERPLNLVGIAWQLWNE 231
+++ + ERP W++ N+
Sbjct: 230 EVMS--------YGERPY------WEMSNQ 245
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 89/183 (48%), Gaps = 23/183 (12%)
Query: 40 ILVGKFPNEQEVAIKRLAWTSGQGRVE---FQNEAKLIAKLQYTNLVKLLGCSIHGEERL 96
+ +G + +VA+K L QG + F EA L+ +LQ+ LV+L + E
Sbjct: 39 VWMGYYNGHTKVAVKSLK----QGSMSPDAFLAEANLMKQLQHQRLVRLYAV-VTQEPIY 93
Query: 97 LVYEFMPNKSL------DSSFSGTFKDLLCLHK--------YSRLRVIHRDLKASNILLD 142
++ E+M N SL S T LL + IHRDL+A+NIL+
Sbjct: 94 IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVS 153
Query: 143 DQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLK 202
D L+ KI+DFG+AR+ NE A + + E GT +IK+DV+ FG+L+ +
Sbjct: 154 DTLSCKIADFGLARLIEDNEYTAREGAKFPI-KWTAPEAINYGTFTIKSDVWSFGILLTE 212
Query: 203 IVC 205
IV
Sbjct: 213 IVT 215
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 89/183 (48%), Gaps = 23/183 (12%)
Query: 40 ILVGKFPNEQEVAIKRLAWTSGQGRVE---FQNEAKLIAKLQYTNLVKLLGCSIHGEERL 96
+ +G + +VA+K L QG + F EA L+ +LQ+ LV+L + E
Sbjct: 34 VWMGYYNGHTKVAVKSLK----QGSMSPDAFLAEANLMKQLQHQRLVRLYAV-VTQEPIY 88
Query: 97 LVYEFMPNKSL------DSSFSGTFKDLLCLHK--------YSRLRVIHRDLKASNILLD 142
++ E+M N SL S T LL + IHRDL+A+NIL+
Sbjct: 89 IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVS 148
Query: 143 DQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLK 202
D L+ KI+DFG+AR+ NE A + + E GT +IK+DV+ FG+L+ +
Sbjct: 149 DTLSCKIADFGLARLIEDNEYTAREGAKFPI-KWTAPEAINYGTFTIKSDVWSFGILLTE 207
Query: 203 IVC 205
IV
Sbjct: 208 IVT 210
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 89/183 (48%), Gaps = 23/183 (12%)
Query: 40 ILVGKFPNEQEVAIKRLAWTSGQGRVE---FQNEAKLIAKLQYTNLVKLLGCSIHGEERL 96
+ +G + +VA+K L QG + F EA L+ +LQ+ LV+L + E
Sbjct: 30 VWMGYYNGHTKVAVKSLK----QGSMSPDAFLAEANLMKQLQHQRLVRLYAV-VTQEPIY 84
Query: 97 LVYEFMPNKSL------DSSFSGTFKDLLCLHK--------YSRLRVIHRDLKASNILLD 142
++ E+M N SL S T LL + IHRDL+A+NIL+
Sbjct: 85 IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVS 144
Query: 143 DQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLK 202
D L+ KI+DFG+AR+ NE A + + E GT +IK+DV+ FG+L+ +
Sbjct: 145 DTLSCKIADFGLARLIEDNEXTAREGAKFPI-KWTAPEAINYGTFTIKSDVWSFGILLTE 203
Query: 203 IVC 205
IV
Sbjct: 204 IVT 206
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 89/183 (48%), Gaps = 23/183 (12%)
Query: 40 ILVGKFPNEQEVAIKRLAWTSGQGRVE---FQNEAKLIAKLQYTNLVKLLGCSIHGEERL 96
+ +G + +VA+K L QG + F EA L+ +LQ+ LV+L + E
Sbjct: 29 VWMGYYNGHTKVAVKSLK----QGSMSPDAFLAEANLMKQLQHQRLVRLYAV-VTQEPIY 83
Query: 97 LVYEFMPNKSL------DSSFSGTFKDLLCLHK--------YSRLRVIHRDLKASNILLD 142
++ E+M N SL S T LL + IHRDL+A+NIL+
Sbjct: 84 IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVS 143
Query: 143 DQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLK 202
D L+ KI+DFG+AR+ NE A + + E GT +IK+DV+ FG+L+ +
Sbjct: 144 DTLSCKIADFGLARLIEDNEXTAREGAKFPI-KWTAPEAINYGTFTIKSDVWSFGILLTE 202
Query: 203 IVC 205
IV
Sbjct: 203 IVT 205
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 104/210 (49%), Gaps = 41/210 (19%)
Query: 44 KFPNEQE--VAIK--RLAWTSGQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVY 99
K P+++E VAIK ++ +T Q R +F EA ++ + + N+++L G + ++V
Sbjct: 65 KLPSKKEISVAIKTLKVGYTEKQRR-DFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVT 123
Query: 100 EFMPNKSLDS------------SFSGTFKDLLCLHKY-SRLRVIHRDLKASNILLDDQLN 146
E+M N SLDS G + + KY S + +HRDL A NIL++ L
Sbjct: 124 EYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLV 183
Query: 147 TKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIK-----TDVFGFGVLVL 201
K+SDFG++R+ + A T R G + + +T ++ + +DV+ +G+++
Sbjct: 184 CKVSDFGLSRVLEDDPEAAYTTR----GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLW 239
Query: 202 KIVCGKKNNKSYHTERPLNLVGIAWQLWNE 231
+++ + ERP W++ N+
Sbjct: 240 EVMS--------YGERPY------WEMSNQ 255
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 89/183 (48%), Gaps = 23/183 (12%)
Query: 40 ILVGKFPNEQEVAIKRLAWTSGQGRVE---FQNEAKLIAKLQYTNLVKLLGCSIHGEERL 96
+ +G + +VA+K L QG + F EA L+ +LQ+ LV+L + E
Sbjct: 35 VWMGYYNGHTKVAVKSLK----QGSMSPDAFLAEANLMKQLQHQRLVRLYAV-VTQEPIY 89
Query: 97 LVYEFMPNKSL------DSSFSGTFKDLLCLHK--------YSRLRVIHRDLKASNILLD 142
++ E+M N SL S T LL + IHRDL+A+NIL+
Sbjct: 90 IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVS 149
Query: 143 DQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLK 202
D L+ KI+DFG+AR+ NE A + + E GT +IK+DV+ FG+L+ +
Sbjct: 150 DTLSCKIADFGLARLIEDNEYTAREGAKFPI-KWTAPEAINYGTFTIKSDVWSFGILLTE 208
Query: 203 IVC 205
IV
Sbjct: 209 IVT 211
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 104/210 (49%), Gaps = 41/210 (19%)
Query: 44 KFPNEQE--VAIK--RLAWTSGQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVY 99
K P+++E VAIK ++ +T Q R +F EA ++ + + N+++L G + ++V
Sbjct: 67 KLPSKKEISVAIKTLKVGYTEKQRR-DFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVT 125
Query: 100 EFMPNKSLDS------------SFSGTFKDLLCLHKY-SRLRVIHRDLKASNILLDDQLN 146
E+M N SLDS G + + KY S + +HRDL A NIL++ L
Sbjct: 126 EYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLV 185
Query: 147 TKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIK-----TDVFGFGVLVL 201
K+SDFG++R+ + A T R G + + +T ++ + +DV+ +G+++
Sbjct: 186 CKVSDFGLSRVLEDDPEAAYTTR----GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLW 241
Query: 202 KIVCGKKNNKSYHTERPLNLVGIAWQLWNE 231
+++ + ERP W++ N+
Sbjct: 242 EVMS--------YGERPY------WEMSNQ 257
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 104/210 (49%), Gaps = 41/210 (19%)
Query: 44 KFPNEQE--VAIK--RLAWTSGQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVY 99
K P+++E VAIK ++ +T Q R +F EA ++ + + N+++L G + ++V
Sbjct: 67 KLPSKKEISVAIKTLKVGYTEKQRR-DFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVT 125
Query: 100 EFMPNKSLDS------------SFSGTFKDLLCLHKY-SRLRVIHRDLKASNILLDDQLN 146
E+M N SLDS G + + KY S + +HRDL A NIL++ L
Sbjct: 126 EYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLV 185
Query: 147 TKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIK-----TDVFGFGVLVL 201
K+SDFG++R+ + A T R G + + +T ++ + +DV+ +G+++
Sbjct: 186 CKVSDFGLSRVLEDDPEAAYTTR----GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLW 241
Query: 202 KIVCGKKNNKSYHTERPLNLVGIAWQLWNE 231
+++ + ERP W++ N+
Sbjct: 242 EVMS--------YGERPY------WEMSNQ 257
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 104/210 (49%), Gaps = 41/210 (19%)
Query: 44 KFPNEQE--VAIK--RLAWTSGQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVY 99
K P+++E VAIK ++ +T Q R +F EA ++ + + N+++L G + ++V
Sbjct: 67 KLPSKKEISVAIKTLKVGYTEKQRR-DFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVT 125
Query: 100 EFMPNKSLDS------------SFSGTFKDLLCLHKY-SRLRVIHRDLKASNILLDDQLN 146
E+M N SLDS G + + KY S + +HRDL A NIL++ L
Sbjct: 126 EYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLV 185
Query: 147 TKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIK-----TDVFGFGVLVL 201
K+SDFG++R+ + A T R G + + +T ++ + +DV+ +G+++
Sbjct: 186 CKVSDFGLSRVLEDDPEAAYTTR----GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLW 241
Query: 202 KIVCGKKNNKSYHTERPLNLVGIAWQLWNE 231
+++ + ERP W++ N+
Sbjct: 242 EVMS--------YGERPY------WEMSNQ 257
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 104/210 (49%), Gaps = 41/210 (19%)
Query: 44 KFPNEQE--VAIK--RLAWTSGQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVY 99
K P+++E VAIK ++ +T Q R +F EA ++ + + N+++L G + ++V
Sbjct: 67 KLPSKKEISVAIKTLKVGYTEKQRR-DFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVT 125
Query: 100 EFMPNKSLDS------------SFSGTFKDLLCLHKY-SRLRVIHRDLKASNILLDDQLN 146
E+M N SLDS G + + KY S + +HRDL A NIL++ L
Sbjct: 126 EYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLV 185
Query: 147 TKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIK-----TDVFGFGVLVL 201
K+SDFG++R+ + A T R G + + +T ++ + +DV+ +G+++
Sbjct: 186 CKVSDFGLSRVLEDDPEAAYTTR----GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLW 241
Query: 202 KIVCGKKNNKSYHTERPLNLVGIAWQLWNE 231
+++ + ERP W++ N+
Sbjct: 242 EVMS--------YGERPY------WEMSNQ 257
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 104/210 (49%), Gaps = 41/210 (19%)
Query: 44 KFPNEQE--VAIK--RLAWTSGQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVY 99
K P+++E VAIK ++ +T Q R +F EA ++ + + N+++L G + ++V
Sbjct: 67 KLPSKKEISVAIKTLKVGYTEKQRR-DFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVT 125
Query: 100 EFMPNKSLDS------------SFSGTFKDLLCLHKY-SRLRVIHRDLKASNILLDDQLN 146
E+M N SLDS G + + KY S + +HRDL A NIL++ L
Sbjct: 126 EYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGFVHRDLAARNILINSNLV 185
Query: 147 TKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIK-----TDVFGFGVLVL 201
K+SDFG++R+ + A T R G + + +T ++ + +DV+ +G+++
Sbjct: 186 CKVSDFGLSRVLEDDPEAAYTTR----GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLW 241
Query: 202 KIVCGKKNNKSYHTERPLNLVGIAWQLWNE 231
+++ + ERP W++ N+
Sbjct: 242 EVMS--------YGERPY------WEMSNQ 257
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 104/210 (49%), Gaps = 41/210 (19%)
Query: 44 KFPNEQE--VAIK--RLAWTSGQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVY 99
K P+++E VAIK ++ +T Q R +F EA ++ + + N+++L G + ++V
Sbjct: 38 KLPSKKEISVAIKTLKVGYTEKQRR-DFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVT 96
Query: 100 EFMPNKSLDS------------SFSGTFKDLLCLHKY-SRLRVIHRDLKASNILLDDQLN 146
E+M N SLDS G + + KY S + +HRDL A NIL++ L
Sbjct: 97 EYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLV 156
Query: 147 TKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIK-----TDVFGFGVLVL 201
K+SDFG++R+ + A T R G + + +T ++ + +DV+ +G+++
Sbjct: 157 CKVSDFGLSRVLEDDPEAAYTTR----GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLW 212
Query: 202 KIVCGKKNNKSYHTERPLNLVGIAWQLWNE 231
+++ + ERP W++ N+
Sbjct: 213 EVMS--------YGERPY------WEMSNQ 228
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 103/210 (49%), Gaps = 41/210 (19%)
Query: 44 KFPNEQE--VAIK--RLAWTSGQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVY 99
K P+++E VAIK ++ +T Q R +F EA ++ + + N+++L G + ++V
Sbjct: 67 KLPSKKEISVAIKTLKVGYTEKQRR-DFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVT 125
Query: 100 EFMPNKSLDS------------SFSGTFKDLLCLHKY-SRLRVIHRDLKASNILLDDQLN 146
E+M N SLDS G + + KY S + +HRDL A NIL++ L
Sbjct: 126 EYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLV 185
Query: 147 TKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIK-----TDVFGFGVLVL 201
K+SDFG+ R+ + A T R G + + +T ++ + +DV+ +G+++
Sbjct: 186 CKVSDFGLGRVLEDDPEAAYTTR----GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLW 241
Query: 202 KIVCGKKNNKSYHTERPLNLVGIAWQLWNE 231
+++ + ERP W++ N+
Sbjct: 242 EVMS--------YGERPY------WEMSNQ 257
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 89/183 (48%), Gaps = 23/183 (12%)
Query: 40 ILVGKFPNEQEVAIKRLAWTSGQGRVE---FQNEAKLIAKLQYTNLVKLLGCSIHGEERL 96
+ +G + +VA+K L QG + F EA L+ +LQ+ LV+L + E
Sbjct: 29 VWMGYYNGHTKVAVKSLK----QGSMSPDAFLAEANLMKQLQHQRLVRLYAV-VTQEPIY 83
Query: 97 LVYEFMPNKSL------DSSFSGTFKDLLCLHK--------YSRLRVIHRDLKASNILLD 142
++ E+M N SL S T LL + IHRDL+A+NIL+
Sbjct: 84 IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVS 143
Query: 143 DQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLK 202
D L+ KI+DFG+AR+ NE A + + E GT +IK+DV+ FG+L+ +
Sbjct: 144 DTLSCKIADFGLARLIEDNEYTAREGAKFPI-KWTAPEAINYGTFTIKSDVWSFGILLTE 202
Query: 203 IVC 205
IV
Sbjct: 203 IVT 205
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 89/183 (48%), Gaps = 23/183 (12%)
Query: 40 ILVGKFPNEQEVAIKRLAWTSGQGRVE---FQNEAKLIAKLQYTNLVKLLGCSIHGEERL 96
+ +G + +VA+K L QG + F EA L+ +LQ+ LV+L + E
Sbjct: 24 VWMGYYNGHTKVAVKSLK----QGSMSPDAFLAEANLMKQLQHQRLVRLYAV-VTQEPIY 78
Query: 97 LVYEFMPNKSL------DSSFSGTFKDLLCLHK--------YSRLRVIHRDLKASNILLD 142
++ E+M N SL S T LL + IHRDL+A+NIL+
Sbjct: 79 IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVS 138
Query: 143 DQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLK 202
D L+ KI+DFG+AR+ NE A + + E GT +IK+DV+ FG+L+ +
Sbjct: 139 DTLSCKIADFGLARLIEDNEYTAREGAKFPI-KWTAPEAINYGTFTIKSDVWSFGILLTE 197
Query: 203 IVC 205
IV
Sbjct: 198 IVT 200
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 103/210 (49%), Gaps = 41/210 (19%)
Query: 44 KFPNEQE--VAIK--RLAWTSGQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVY 99
K P+++E VAIK ++ +T Q R +F EA ++ + + N+++L G + ++V
Sbjct: 67 KLPSKKEISVAIKTLKVGYTEKQRR-DFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVT 125
Query: 100 EFMPNKSLDS------------SFSGTFKDLLCLHKY-SRLRVIHRDLKASNILLDDQLN 146
E M N SLDS G + + KY S + +HRDL A NIL++ L
Sbjct: 126 EXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGAVHRDLAARNILINSNLV 185
Query: 147 TKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIK-----TDVFGFGVLVL 201
K+SDFG++R+ + A T R G + + +T ++ + +DV+ +G+++
Sbjct: 186 CKVSDFGLSRVLEDDPEAAYTTR----GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLW 241
Query: 202 KIVCGKKNNKSYHTERPLNLVGIAWQLWNE 231
+++ + ERP W++ N+
Sbjct: 242 EVMS--------YGERPY------WEMSNQ 257
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/185 (31%), Positives = 90/185 (48%), Gaps = 27/185 (14%)
Query: 40 ILVGKFPNEQEVAIKRLAWTSGQGRVE---FQNEAKLIAKLQYTNLVKLLGCSIHGEERL 96
+ +G + +VA+K L QG + F EA L+ +LQ+ LV+L + E
Sbjct: 29 VWMGYYNGHTKVAVKSLK----QGSMSPDAFLAEANLMKQLQHQRLVRLYAV-VTQEPIY 83
Query: 97 LVYEFMPNKSL------DSSFSGTFKDLLCLHK--------YSRLRVIHRDLKASNILLD 142
++ E+M N SL S T LL + IHRDL+A+NIL+
Sbjct: 84 IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVS 143
Query: 143 DQLNTKISDFGMARIFGVNESGANTNRIVGTYG--YMSLEYTMSGTVSIKTDVFGFGVLV 200
D L+ KI+DFG+AR+ E T R + + + E GT +IK+DV+ FG+L+
Sbjct: 144 DTLSCKIADFGLARLI---EDAEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILL 200
Query: 201 LKIVC 205
+IV
Sbjct: 201 TEIVT 205
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 100/199 (50%), Gaps = 35/199 (17%)
Query: 37 DRVILVGKF----------PNEQE--VAIKRL-AWTSGQGRVEFQNEAKLIAKLQYTNLV 83
++VI VG+F P ++E VAIK L A + + R +F +EA ++ + + N++
Sbjct: 34 EKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNII 93
Query: 84 KLLGCSIHGEERLLVYEFMPNKSLDS------------SFSGTFKDLLCLHKY-SRLRVI 130
L G + +++ E+M N SLD+ G + + KY S + +
Sbjct: 94 HLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSDMSAV 153
Query: 131 HRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIK 190
HRDL A NIL++ L K+SDFGM+R+ + A T R G + + +T ++ +
Sbjct: 154 HRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTR----GGKIPIRWTAPEAIAYR 209
Query: 191 -----TDVFGFGVLVLKIV 204
+DV+ +G+++ +++
Sbjct: 210 KFTSASDVWSYGIVMWEVM 228
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 103/210 (49%), Gaps = 41/210 (19%)
Query: 44 KFPNEQE--VAIK--RLAWTSGQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVY 99
K P+++E VAIK ++ +T Q R +F EA ++ + + N+++L G + ++V
Sbjct: 67 KLPSKKEISVAIKTLKVGYTEKQRR-DFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVT 125
Query: 100 EFMPNKSLDS------------SFSGTFKDLLCLHKY-SRLRVIHRDLKASNILLDDQLN 146
E M N SLDS G + + KY S + +HRDL A NIL++ L
Sbjct: 126 EXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLV 185
Query: 147 TKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIK-----TDVFGFGVLVL 201
K+SDFG++R+ + A T R G + + +T ++ + +DV+ +G+++
Sbjct: 186 CKVSDFGLSRVLEDDPEAAYTTR----GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLW 241
Query: 202 KIVCGKKNNKSYHTERPLNLVGIAWQLWNE 231
+++ + ERP W++ N+
Sbjct: 242 EVMS--------YGERPY------WEMSNQ 257
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 103/210 (49%), Gaps = 41/210 (19%)
Query: 44 KFPNEQE--VAIK--RLAWTSGQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVY 99
K P+++E VAIK ++ +T Q R +F EA ++ + + N+++L G + ++V
Sbjct: 38 KLPSKKEISVAIKTLKVGYTEKQRR-DFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVT 96
Query: 100 EFMPNKSLDS------------SFSGTFKDLLCLHKY-SRLRVIHRDLKASNILLDDQLN 146
E M N SLDS G + + KY S + +HRDL A NIL++ L
Sbjct: 97 EXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLV 156
Query: 147 TKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIK-----TDVFGFGVLVL 201
K+SDFG++R+ + A T R G + + +T ++ + +DV+ +G+++
Sbjct: 157 CKVSDFGLSRVLEDDPEAAYTTR----GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLW 212
Query: 202 KIVCGKKNNKSYHTERPLNLVGIAWQLWNE 231
+++ + ERP W++ N+
Sbjct: 213 EVMS--------YGERPY------WEMSNQ 228
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 100/199 (50%), Gaps = 35/199 (17%)
Query: 37 DRVILVGKF----------PNEQE--VAIKRL-AWTSGQGRVEFQNEAKLIAKLQYTNLV 83
++VI VG+F P ++E VAIK L A + + R +F +EA ++ + + N++
Sbjct: 19 EKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNII 78
Query: 84 KLLGCSIHGEERLLVYEFMPNKSLDS------------SFSGTFKDLLCLHKY-SRLRVI 130
L G + +++ E+M N SLD+ G + + KY S + +
Sbjct: 79 HLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSDMSYV 138
Query: 131 HRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIK 190
HRDL A NIL++ L K+SDFGM+R+ + A T R G + + +T ++ +
Sbjct: 139 HRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTR----GGKIPIRWTAPEAIAYR 194
Query: 191 -----TDVFGFGVLVLKIV 204
+DV+ +G+++ +++
Sbjct: 195 KFTSASDVWSYGIVMWEVM 213
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 100/199 (50%), Gaps = 35/199 (17%)
Query: 37 DRVILVGKF----------PNEQE--VAIKRL-AWTSGQGRVEFQNEAKLIAKLQYTNLV 83
++VI VG+F P ++E VAIK L A + + R +F +EA ++ + + N++
Sbjct: 13 EKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNII 72
Query: 84 KLLGCSIHGEERLLVYEFMPNKSLDS------------SFSGTFKDLLCLHKY-SRLRVI 130
L G + +++ E+M N SLD+ G + + KY S + +
Sbjct: 73 HLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSDMSYV 132
Query: 131 HRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIK 190
HRDL A NIL++ L K+SDFGM+R+ + A T R G + + +T ++ +
Sbjct: 133 HRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTR----GGKIPIRWTAPEAIAYR 188
Query: 191 -----TDVFGFGVLVLKIV 204
+DV+ +G+++ +++
Sbjct: 189 KFTSASDVWSYGIVMWEVM 207
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 95/192 (49%), Gaps = 25/192 (13%)
Query: 33 EQTRDRVILVGKFPNEQEVAIKRL--AWTSGQGRVEFQNEAKLIAKLQYTNLVKLLGCSI 90
E R R+ GK E VAIK L +T Q R EF +EA ++ + ++ N+++L G
Sbjct: 31 EVCRGRLKAPGK--KESCVAIKTLKGGYTERQRR-EFLSEASIMGQFEHPNIIRLEGVVT 87
Query: 91 HGEERLLVYEFMPNKSLDS------------SFSGTFKDLLCLHKY-SRLRVIHRDLKAS 137
+ +++ EFM N +LDS G + + +Y + + +HRDL A
Sbjct: 88 NSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASGMRYLAEMSYVHRDLAAR 147
Query: 138 NILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIK-----TD 192
NIL++ L K+SDFG++R N S +G G + + +T ++ + +D
Sbjct: 148 NILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLG--GKIPIRWTAPEAIAFRKFTSASD 205
Query: 193 VFGFGVLVLKIV 204
+ +G+++ +++
Sbjct: 206 AWSYGIVMWEVM 217
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 58/183 (31%), Positives = 89/183 (48%), Gaps = 23/183 (12%)
Query: 40 ILVGKFPNEQEVAIKRLAWTSGQGRVE---FQNEAKLIAKLQYTNLVKLLGCSIHGEERL 96
+ +G + +VA+K L QG + F EA L+ +LQ+ LV+L + E
Sbjct: 25 VWMGYYNGHTKVAVKSLK----QGSMSPDAFLAEANLMKQLQHQRLVRLYAV-VTQEPIY 79
Query: 97 LVYEFMPNKSL------DSSFSGTFKDLLCLHK--------YSRLRVIHRDLKASNILLD 142
++ E+M N SL S T LL + IHR+L+A+NIL+
Sbjct: 80 IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRNLRAANILVS 139
Query: 143 DQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLK 202
D L+ KI+DFG+AR+ NE A + + E GT +IK+DV+ FG+L+ +
Sbjct: 140 DTLSCKIADFGLARLIEDNEYTAREGAKFPI-KWTAPEAINYGTFTIKSDVWSFGILLTE 198
Query: 203 IVC 205
IV
Sbjct: 199 IVT 201
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 95/192 (49%), Gaps = 25/192 (13%)
Query: 33 EQTRDRVILVGKFPNEQEVAIKRL--AWTSGQGRVEFQNEAKLIAKLQYTNLVKLLGCSI 90
E R R+ GK E VAIK L +T Q R EF +EA ++ + ++ N+++L G
Sbjct: 29 EVCRGRLKAPGK--KESCVAIKTLKGGYTERQRR-EFLSEASIMGQFEHPNIIRLEGVVT 85
Query: 91 HGEERLLVYEFMPNKSLDS------------SFSGTFKDLLCLHKY-SRLRVIHRDLKAS 137
+ +++ EFM N +LDS G + + +Y + + +HRDL A
Sbjct: 86 NSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASGMRYLAEMSYVHRDLAAR 145
Query: 138 NILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIK-----TD 192
NIL++ L K+SDFG++R N S +G G + + +T ++ + +D
Sbjct: 146 NILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLG--GKIPIRWTAPEAIAFRKFTSASD 203
Query: 193 VFGFGVLVLKIV 204
+ +G+++ +++
Sbjct: 204 AWSYGIVMWEVM 215
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 106/228 (46%), Gaps = 50/228 (21%)
Query: 35 TRDRVILVGKF-------------PNEQEVAIKRL-AWTSGQGRVEFQNEAKLIAKLQYT 80
TR +VI G+F E VAIK L A + + RV+F EA ++ + +
Sbjct: 47 TRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHH 106
Query: 81 NLVKLLGCSIHGEERLLVYEFMPNKSLD-------SSFS-----GTFKDLLCLHKY-SRL 127
N+++L G + +++ E+M N +LD FS G + + KY + +
Sbjct: 107 NIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANM 166
Query: 128 RVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTV 187
+HRDL A NIL++ L K+SDFG++R+ + T + G + + +T +
Sbjct: 167 NYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTT----SGGKIPIRWTAPEAI 222
Query: 188 SIK-----TDVFGFGVLVLKIVCGKKNNKSYHTERPLNLVGIAWQLWN 230
S + +DV+ FG+++ +++ + ERP W+L N
Sbjct: 223 SYRKFTSASDVWSFGIVMWEVMT--------YGERPY------WELSN 256
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 85/182 (46%), Gaps = 22/182 (12%)
Query: 40 ILVGKFPNEQEVAIKRLAWTSGQGRVE-FQNEAKLIAKLQYTNLVKLLGCSIHGEERLLV 98
+ +G + N +VA+K L G V+ F EA L+ LQ+ LV+L E ++
Sbjct: 29 VWMGYYNNSTKVAVKTL--KPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTREEPIYII 86
Query: 99 YEFMPNKSLDS----------------SFSGTFKDLLCLHKYSRLRVIHRDLKASNILLD 142
E+M SL FS + + R IHRDL+A+N+L+
Sbjct: 87 TEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAY--IERKNYIHRDLRAANVLVS 144
Query: 143 DQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLK 202
+ L KI+DFG+AR+ NE A + + E G +IK+DV+ FG+L+ +
Sbjct: 145 ESLMCKIADFGLARVIEDNEYTAREGAKFPI-KWTAPEAINFGCFTIKSDVWSFGILLYE 203
Query: 203 IV 204
IV
Sbjct: 204 IV 205
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 97/200 (48%), Gaps = 37/200 (18%)
Query: 37 DRVILVGKF----------PNEQEVAIK----RLAWTSGQGRVEFQNEAKLIAKLQYTNL 82
+RVI G+F P +++VA+ ++ +T Q R +F EA ++ + + N+
Sbjct: 48 ERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRR-DFLCEASIMGQFDHPNV 106
Query: 83 VKLLGCSIHGEERLLVYEFMPNKSLDS------------SFSGTFKDLLCLHKY-SRLRV 129
V L G G+ ++V EFM N +LD+ G + + +Y + +
Sbjct: 107 VHLEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTVIQLVGMLRGIAAGMRYLADMGY 166
Query: 130 IHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSI 189
+HRDL A NIL++ L K+SDFG++R+ + T T G + + +T +
Sbjct: 167 VHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTT----TGGKIPVRWTAPEAIQY 222
Query: 190 K-----TDVFGFGVLVLKIV 204
+ +DV+ +G+++ +++
Sbjct: 223 RKFTSASDVWSYGIVMWEVM 242
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 90/183 (49%), Gaps = 25/183 (13%)
Query: 44 KFPNEQE--VAIKRL--AWTSGQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVY 99
K P ++E VAIK L +T Q R +F +EA ++ + + N++ L G +++
Sbjct: 55 KLPGKREIFVAIKTLKSGYTEKQRR-DFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIIT 113
Query: 100 EFMPNKSLDS------------SFSGTFKDLLCLHKY-SRLRVIHRDLKASNILLDDQLN 146
EFM N SLDS G + + KY + + +HRDL A NIL++ L
Sbjct: 114 EFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMNYVHRDLAARNILVNSNLV 173
Query: 147 TKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIK-----TDVFGFGVLVL 201
K+SDFG++R + S +G G + + +T + + +DV+ +G+++
Sbjct: 174 CKVSDFGLSRFLEDDTSDPTYTSALG--GKIPIRWTAPEAIQYRKFTSASDVWSYGIVMW 231
Query: 202 KIV 204
+++
Sbjct: 232 EVM 234
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 85/182 (46%), Gaps = 22/182 (12%)
Query: 40 ILVGKFPNEQEVAIKRLAWTSGQGRVE-FQNEAKLIAKLQYTNLVKLLGCSIHGEERLLV 98
+ +G + N +VA+K L G V+ F EA L+ LQ+ LV+L E ++
Sbjct: 28 VWMGYYNNSTKVAVKTL--KPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYII 85
Query: 99 YEFMPNKSLDS----------------SFSGTFKDLLCLHKYSRLRVIHRDLKASNILLD 142
EFM SL FS + + R IHRDL+A+N+L+
Sbjct: 86 TEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAY--IERKNYIHRDLRAANVLVS 143
Query: 143 DQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLK 202
+ L KI+DFG+AR+ NE A + + E G +IK++V+ FG+L+ +
Sbjct: 144 ESLMCKIADFGLARVIEDNEYTAREGAKFPI-KWTAPEAINFGCFTIKSNVWSFGILLYE 202
Query: 203 IV 204
IV
Sbjct: 203 IV 204
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 84/179 (46%), Gaps = 17/179 (9%)
Query: 40 ILVGKFPNEQEVAIKRLAWTSGQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVY 99
+ +G + VAIK L F EA+++ KL++ LV+L + E +V
Sbjct: 34 VWMGTWNGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQLYAV-VSEEPIYIVI 91
Query: 100 EFMPNKSLDSSFSGTFKDLLCLHK--------------YSRLRVIHRDLKASNILLDDQL 145
E+M SL G L L + R+ +HRDL+A+NIL+ + L
Sbjct: 92 EYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENL 151
Query: 146 NTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKIV 204
K++DFG+AR+ NE A + + E + G +IK+DV+ FG+L+ ++
Sbjct: 152 VCKVADFGLARLIEDNEXTARQGAKF-PIKWTAPEAALYGRFTIKSDVWSFGILLTELT 209
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 84/179 (46%), Gaps = 17/179 (9%)
Query: 40 ILVGKFPNEQEVAIKRLAWTSGQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVY 99
+ +G + VAIK L F EA+++ KL++ LV+L + E +V
Sbjct: 25 VWMGTWNGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQLYAV-VSEEPIYIVT 82
Query: 100 EFMPNKSLDSSFSGTFKDLLCLHK--------------YSRLRVIHRDLKASNILLDDQL 145
E+M SL G L L + R+ +HRDL+A+NIL+ + L
Sbjct: 83 EYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENL 142
Query: 146 NTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKIV 204
K++DFG+AR+ NE A + + E + G +IK+DV+ FG+L+ ++
Sbjct: 143 VCKVADFGLARLIEDNEYTARQGAKF-PIKWTAPEAALYGRFTIKSDVWSFGILLTELT 200
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 96/214 (44%), Gaps = 50/214 (23%)
Query: 41 LVGKFPNEQ--EVAIKRLA-WTSGQGRVEFQNEAKLIAKLQYTNLVKLLG---------- 87
L G P EQ VAIK L G R EF++EA L A+LQ+ N+V LLG
Sbjct: 47 LFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSM 106
Query: 88 ----CSIHGEERLLVYEFMPNKSLDSSFSGTFKDLLC-------------------LHKY 124
CS HG+ ++EF+ +S S T D +
Sbjct: 107 IFSYCS-HGD----LHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYL 161
Query: 125 SRLRVIHRDLKASNILLDDQLNTKISDFGMAR-IFGVNESGANTNRIVGTYGYMSLEYTM 183
S V+H+DL N+L+ D+LN KISD G+ R ++ + N ++ +M+ E M
Sbjct: 162 SSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPI-RWMAPEAIM 220
Query: 184 SGTVSIKTDVFGFGVLV-------LKIVCGKKNN 210
G SI +D++ +GV++ L+ CG N
Sbjct: 221 YGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQ 254
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 84/179 (46%), Gaps = 17/179 (9%)
Query: 40 ILVGKFPNEQEVAIKRLAWTSGQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVY 99
+ +G + VAIK L F EA+++ KL++ LV+L + E +V
Sbjct: 34 VWMGTWNGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQLYAV-VSEEPIYIVI 91
Query: 100 EFMPNKSLDSSFSGTFKDLLCLHK--------------YSRLRVIHRDLKASNILLDDQL 145
E+M SL G L L + R+ +HRDL+A+NIL+ + L
Sbjct: 92 EYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENL 151
Query: 146 NTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKIV 204
K++DFG+AR+ NE A + + E + G +IK+DV+ FG+L+ ++
Sbjct: 152 VCKVADFGLARLIEDNEYTARQGAKF-PIKWTAPEAALYGRFTIKSDVWSFGILLTELT 209
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 84/179 (46%), Gaps = 17/179 (9%)
Query: 40 ILVGKFPNEQEVAIKRLAWTSGQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVY 99
+ +G + VAIK L F EA+++ KL++ LV+L + E +V
Sbjct: 23 VWMGTWNGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQLYAV-VSEEPIYIVT 80
Query: 100 EFMPNKSLDSSFSGTFKDLLCLHK--------------YSRLRVIHRDLKASNILLDDQL 145
E+M SL G L L + R+ +HRDL+A+NIL+ + L
Sbjct: 81 EYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENL 140
Query: 146 NTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKIV 204
K++DFG+AR+ NE A + + E + G +IK+DV+ FG+L+ ++
Sbjct: 141 VCKVADFGLARLIEDNEYTARQGAKF-PIKWTAPEAALYGRFTIKSDVWSFGILLTELT 198
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 84/179 (46%), Gaps = 17/179 (9%)
Query: 40 ILVGKFPNEQEVAIKRLAWTSGQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVY 99
+ +G + VAIK L F EA+++ KL++ LV+L + E +V
Sbjct: 34 VWMGTWNGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQLYAV-VSEEPIYIVT 91
Query: 100 EFMPNKSLDSSFSGTFKDLLCLHK--------------YSRLRVIHRDLKASNILLDDQL 145
E+M SL G L L + R+ +HRDL+A+NIL+ + L
Sbjct: 92 EYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENL 151
Query: 146 NTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKIV 204
K++DFG+AR+ NE A + + E + G +IK+DV+ FG+L+ ++
Sbjct: 152 VCKVADFGLARLIEDNEYTARQGAKF-PIKWTAPEAALYGRFTIKSDVWSFGILLTELT 209
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 84/179 (46%), Gaps = 17/179 (9%)
Query: 40 ILVGKFPNEQEVAIKRLAWTSGQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVY 99
+ +G + VAIK L F EA+++ KL++ LV+L + E +V
Sbjct: 34 VWMGTWNGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQLYAV-VSEEPIYIVC 91
Query: 100 EFMPNKSLDSSFSGTFKDLLCLHK--------------YSRLRVIHRDLKASNILLDDQL 145
E+M SL G L L + R+ +HRDL+A+NIL+ + L
Sbjct: 92 EYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENL 151
Query: 146 NTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKIV 204
K++DFG+AR+ NE A + + E + G +IK+DV+ FG+L+ ++
Sbjct: 152 VCKVADFGLARLIEDNEYTARQGAKF-PIKWTAPEAALYGRFTIKSDVWSFGILLTELT 209
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 84/179 (46%), Gaps = 17/179 (9%)
Query: 40 ILVGKFPNEQEVAIKRLAWTSGQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVY 99
+ +G + VAIK L F EA+++ KL++ LV+L + E +V
Sbjct: 24 VWMGTWNGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQLYAV-VSEEPIXIVT 81
Query: 100 EFMPNKSLDSSFSGTFKDLLCLHK--------------YSRLRVIHRDLKASNILLDDQL 145
E+M SL G L L + R+ +HRDL+A+NIL+ + L
Sbjct: 82 EYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENL 141
Query: 146 NTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKIV 204
K++DFG+AR+ NE A + + E + G +IK+DV+ FG+L+ ++
Sbjct: 142 VCKVADFGLARLIEDNEXTARQGAKF-PIKWTAPEAALYGRFTIKSDVWSFGILLTELT 199
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 96/214 (44%), Gaps = 50/214 (23%)
Query: 41 LVGKFPNEQ--EVAIKRLA-WTSGQGRVEFQNEAKLIAKLQYTNLVKLLG---------- 87
L G P EQ VAIK L G R EF++EA L A+LQ+ N+V LLG
Sbjct: 30 LFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSM 89
Query: 88 ----CSIHGEERLLVYEFMPNKSLDSSFSGTFKDLLC-------------------LHKY 124
CS HG+ ++EF+ +S S T D +
Sbjct: 90 IFSYCS-HGD----LHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYL 144
Query: 125 SRLRVIHRDLKASNILLDDQLNTKISDFGMAR-IFGVNESGANTNRIVGTYGYMSLEYTM 183
S V+H+DL N+L+ D+LN KISD G+ R ++ + N ++ +M+ E M
Sbjct: 145 SSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIR-WMAPEAIM 203
Query: 184 SGTVSIKTDVFGFGVLV-------LKIVCGKKNN 210
G SI +D++ +GV++ L+ CG N
Sbjct: 204 YGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQ 237
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 97/249 (38%), Gaps = 53/249 (21%)
Query: 51 VAIKRLAWTSGQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSLDSS 110
VA+K L S R +FQ EA+L+ LQ+ ++V+ G G L+V+E+M + L+
Sbjct: 51 VAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRF 110
Query: 111 FSGTFKD-------------------LLCLHK--------YSRLRVIHRDLKASNILLDD 143
D LL + + L +HRDL N L+
Sbjct: 111 LRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQ 170
Query: 144 QLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKI 203
L KI DFGM+R + R + +M E + + ++DV+ FGV++ +I
Sbjct: 171 GLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEI 230
Query: 204 VCGKKNNKSYHTERPLNLVGIAWQLWNEGKDLELIDLTLDG-------SCPPNEDAFLLV 256
K Q W + + E ID G +CPP A ++
Sbjct: 231 FTYGK------------------QPWYQLSNTEAIDCITQGRELERPRACPPEVYA-IMR 271
Query: 257 SCVCKSKQQ 265
C + QQ
Sbjct: 272 GCWQREPQQ 280
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 84/179 (46%), Gaps = 17/179 (9%)
Query: 40 ILVGKFPNEQEVAIKRLAWTSGQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVY 99
+ +G + VAIK L F EA+++ KL++ LV+L + E +V
Sbjct: 27 VWMGTWNGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQLYAV-VSEEPIYIVT 84
Query: 100 EFMPNKSLDSSFSGTFKDLLCLHK--------------YSRLRVIHRDLKASNILLDDQL 145
E+M SL G L L + R+ +HRDL+A+NIL+ + L
Sbjct: 85 EYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENL 144
Query: 146 NTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKIV 204
K++DFG+AR+ NE A + + E + G +IK+DV+ FG+L+ ++
Sbjct: 145 VCKVADFGLARLIEDNEYTARQGAKF-PIKWTAPEAALYGRFTIKSDVWSFGILLTELT 202
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 97/249 (38%), Gaps = 53/249 (21%)
Query: 51 VAIKRLAWTSGQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSLDSS 110
VA+K L S R +FQ EA+L+ LQ+ ++V+ G G L+V+E+M + L+
Sbjct: 45 VAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRF 104
Query: 111 FSGTFKD-------------------LLCLHK--------YSRLRVIHRDLKASNILLDD 143
D LL + + L +HRDL N L+
Sbjct: 105 LRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQ 164
Query: 144 QLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKI 203
L KI DFGM+R + R + +M E + + ++DV+ FGV++ +I
Sbjct: 165 GLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEI 224
Query: 204 VCGKKNNKSYHTERPLNLVGIAWQLWNEGKDLELIDLTLDG-------SCPPNEDAFLLV 256
K Q W + + E ID G +CPP A ++
Sbjct: 225 FTYGK------------------QPWYQLSNTEAIDCITQGRELERPRACPPEVYA-IMR 265
Query: 257 SCVCKSKQQ 265
C + QQ
Sbjct: 266 GCWQREPQQ 274
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 84/179 (46%), Gaps = 17/179 (9%)
Query: 40 ILVGKFPNEQEVAIKRLAWTSGQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVY 99
+ +G + VAIK L F EA+++ K+++ LV+L + E +V
Sbjct: 34 VWMGTWNGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKIRHEKLVQLYAV-VSEEPIYIVT 91
Query: 100 EFMPNKSLDSSFSGTFKDLLCLHK--------------YSRLRVIHRDLKASNILLDDQL 145
E+M SL G L L + R+ +HRDL+A+NIL+ + L
Sbjct: 92 EYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENL 151
Query: 146 NTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKIV 204
K++DFG+AR+ NE A + + E + G +IK+DV+ FG+L+ ++
Sbjct: 152 VCKVADFGLARLIEDNEYTARQGAKF-PIKWTAPEAALYGRFTIKSDVWSFGILLTELT 209
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 83/179 (46%), Gaps = 17/179 (9%)
Query: 40 ILVGKFPNEQEVAIKRLAWTSGQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVY 99
+ +G + VAIK L F EA+++ KL++ LV+L + E +V
Sbjct: 34 VWMGTWNGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQLYAV-VSEEPIYIVT 91
Query: 100 EFMPNKSLDSSFSGTFKDLLCLHK--------------YSRLRVIHRDLKASNILLDDQL 145
E+M SL G L L + R+ +HRDL A+NIL+ + L
Sbjct: 92 EYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLAAANILVGENL 151
Query: 146 NTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKIV 204
K++DFG+AR+ NE A + + E + G +IK+DV+ FG+L+ ++
Sbjct: 152 VCKVADFGLARLIEDNEYTARQGAKF-PIKWTAPEAALYGRFTIKSDVWSFGILLTELT 209
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 89/181 (49%), Gaps = 19/181 (10%)
Query: 40 ILVGKFPNEQEVAIKRLAWTSGQGRVE-FQNEAKLIAKLQYTNLVKLLGCSIHGEERLLV 98
+ + + +VA+K + G VE F EA ++ LQ+ LVKL + E ++
Sbjct: 31 VWMATYNKHTKVAVKTM--KPGSMSVEAFLAEANVMKTLQHDKLVKLHAV-VTKEPIYII 87
Query: 99 YEFMPNKSLDS---SFSGTFKDLLCLHKYS-----------RLRVIHRDLKASNILLDDQ 144
EFM SL S G+ + L L +S + IHRDL+A+NIL+
Sbjct: 88 TEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSAS 147
Query: 145 LNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKIV 204
L KI+DFG+AR+ NE A + + E G+ +IK+DV+ FG+L+++IV
Sbjct: 148 LVCKIADFGLARVIEDNEYTAREGAKF-PIKWTAPEAINFGSFTIKSDVWSFGILLMEIV 206
Query: 205 C 205
Sbjct: 207 T 207
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 97/249 (38%), Gaps = 53/249 (21%)
Query: 51 VAIKRLAWTSGQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSLDSS 110
VA+K L S R +FQ EA+L+ LQ+ ++V+ G G L+V+E+M + L+
Sbjct: 74 VAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRF 133
Query: 111 FSGTFKD-------------------LLCLHK--------YSRLRVIHRDLKASNILLDD 143
D LL + + L +HRDL N L+
Sbjct: 134 LRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQ 193
Query: 144 QLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKI 203
L KI DFGM+R + R + +M E + + ++DV+ FGV++ +I
Sbjct: 194 GLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEI 253
Query: 204 VCGKKNNKSYHTERPLNLVGIAWQLWNEGKDLELIDLTLDG-------SCPPNEDAFLLV 256
K Q W + + E ID G +CPP A ++
Sbjct: 254 FTYGK------------------QPWYQLSNTEAIDCITQGRELERPRACPPEVYA-IMR 294
Query: 257 SCVCKSKQQ 265
C + QQ
Sbjct: 295 GCWQREPQQ 303
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 84/179 (46%), Gaps = 17/179 (9%)
Query: 40 ILVGKFPNEQEVAIKRLAWTSGQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVY 99
+ +G + VAIK L F EA+++ KL++ LV+L + E +V
Sbjct: 31 VWMGTWNGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQLYAV-VSEEPIYIVT 88
Query: 100 EFMPNKSLDSSFSGTFKDLLCLHK--------------YSRLRVIHRDLKASNILLDDQL 145
E+M SL G L L + R+ +HRDL+A+NIL+ + L
Sbjct: 89 EYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMNYVHRDLRAANILVGENL 148
Query: 146 NTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKIV 204
K++DFG+AR+ NE A + + E + G +IK+DV+ FG+L+ ++
Sbjct: 149 VCKVADFGLARLIEDNEWTARQGAKF-PIKWTAPEAALYGRFTIKSDVWSFGILLTELT 206
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 84/179 (46%), Gaps = 17/179 (9%)
Query: 40 ILVGKFPNEQEVAIKRLAWTSGQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVY 99
+ +G + VAIK L F EA+++ KL++ LV+L + E +V
Sbjct: 31 VWMGTWNGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQLYAV-VSEEPIYIVT 88
Query: 100 EFMPNKSLDSSFSGTFKDLLCLHK--------------YSRLRVIHRDLKASNILLDDQL 145
E+M SL G L L + R+ +HRDL+A+NIL+ + L
Sbjct: 89 EYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMNYVHRDLRAANILVGENL 148
Query: 146 NTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKIV 204
K++DFG+AR+ NE A + + E + G +IK+DV+ FG+L+ ++
Sbjct: 149 VCKVADFGLARLIEDNEYTARQGAKF-PIKWTAPEAALYGRFTIKSDVWSFGILLTELT 206
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 84/179 (46%), Gaps = 17/179 (9%)
Query: 40 ILVGKFPNEQEVAIKRLAWTSGQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVY 99
+ +G + VAIK L F EA+++ KL++ LV+L + E +V
Sbjct: 200 VWMGTWNGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQLYAV-VSEEPIYIVT 257
Query: 100 EFMPNKSLDSSFSGTFKDLLCLHK--------------YSRLRVIHRDLKASNILLDDQL 145
E+M SL G L L + R+ +HRDL+A+NIL+ + L
Sbjct: 258 EYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENL 317
Query: 146 NTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKIV 204
K++DFG+AR+ NE A + + E + G +IK+DV+ FG+L+ ++
Sbjct: 318 VCKVADFGLARLIEDNEYTARQGAKF-PIKWTAPEAALYGRFTIKSDVWSFGILLTELT 375
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 84/179 (46%), Gaps = 17/179 (9%)
Query: 40 ILVGKFPNEQEVAIKRLAWTSGQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVY 99
+ +G + VAIK L F EA+++ KL++ LV+L + E +V
Sbjct: 200 VWMGTWNGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQLYAV-VSEEPIYIVT 257
Query: 100 EFMPNKSLDSSFSGTFKDLLCLHK--------------YSRLRVIHRDLKASNILLDDQL 145
E+M SL G L L + R+ +HRDL+A+NIL+ + L
Sbjct: 258 EYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENL 317
Query: 146 NTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKIV 204
K++DFG+AR+ NE A + + E + G +IK+DV+ FG+L+ ++
Sbjct: 318 VCKVADFGLARLIEDNEYTARQGAKF-PIKWTAPEAALYGRFTIKSDVWSFGILLTELT 375
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 83/179 (46%), Gaps = 17/179 (9%)
Query: 40 ILVGKFPNEQEVAIKRLAWTSGQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVY 99
+ +G + VAIK L F EA+++ KL++ LV+L + E +V
Sbjct: 34 VWMGTWNGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQLYAV-VSEEPIYIVM 91
Query: 100 EFMPNKSLDSSFSGTFKDLLCLHK--------------YSRLRVIHRDLKASNILLDDQL 145
E+M L G L L + R+ +HRDL+A+NIL+ + L
Sbjct: 92 EYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENL 151
Query: 146 NTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKIV 204
K++DFG+AR+ NE A + + E + G +IK+DV+ FG+L+ ++
Sbjct: 152 VCKVADFGLARLIEDNEYTARQGAKF-PIKWTAPEAALYGRFTIKSDVWSFGILLTELT 209
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 83/179 (46%), Gaps = 17/179 (9%)
Query: 40 ILVGKFPNEQEVAIKRLAWTSGQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVY 99
+ +G + VAIK L F EA+++ KL++ LV+L + E +V
Sbjct: 34 VWMGTWNGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQLYAV-VSEEPIYIVT 91
Query: 100 EFMPNKSLDSSFSGTFKDLLCLHK--------------YSRLRVIHRDLKASNILLDDQL 145
E+M L G L L + R+ +HRDL+A+NIL+ + L
Sbjct: 92 EYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENL 151
Query: 146 NTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKIV 204
K++DFG+AR+ NE A + + E + G +IK+DV+ FG+L+ ++
Sbjct: 152 VCKVADFGLARLIEDNEYTARQGAKF-PIKWTAPEAALYGRFTIKSDVWSFGILLTELT 209
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 83/179 (46%), Gaps = 17/179 (9%)
Query: 40 ILVGKFPNEQEVAIKRLAWTSGQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVY 99
+ +G + VAIK L F EA+++ KL++ LV+L + E +V
Sbjct: 201 VWMGTWNGTTRVAIKTLK-PGNMSPEAFLQEAQVMKKLRHEKLVQLYAV-VSEEPIYIVT 258
Query: 100 EFMPNKSLDSSFSGTFKDLLCLHK--------------YSRLRVIHRDLKASNILLDDQL 145
E+M SL G L L + R+ +HRDL+A+NIL+ + L
Sbjct: 259 EYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENL 318
Query: 146 NTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKIV 204
K++DFG+ R+ NE A + + E + G +IK+DV+ FG+L+ ++
Sbjct: 319 VCKVADFGLGRLIEDNEYTARQGAKF-PIKWTAPEAALYGRFTIKSDVWSFGILLTELT 376
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 93/197 (47%), Gaps = 33/197 (16%)
Query: 44 KFPNEQE--VAIKRL--AWTSGQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVY 99
K P ++E VAIK L +T Q R +F +EA ++ + + N++ L G +++
Sbjct: 29 KLPGKREIFVAIKTLKSGYTEKQRR-DFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIIT 87
Query: 100 EFMPNKSLDS------------SFSGTFKDLLCLHKY-SRLRVIHRDLKASNILLDDQLN 146
EFM N SLDS G + + KY + + +HR L A NIL++ L
Sbjct: 88 EFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMNYVHRALAARNILVNSNLV 147
Query: 147 TKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIK-----TDVFGFGVLVL 201
K+SDFG++R + S +G G + + +T + + +DV+ +G+++
Sbjct: 148 CKVSDFGLSRFLEDDTSDPTYTSALG--GKIPIRWTAPEAIQYRKFTSASDVWSYGIVMW 205
Query: 202 KIVCGKKNNKSYHTERP 218
+++ + ERP
Sbjct: 206 EVMS--------YGERP 214
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 84/179 (46%), Gaps = 17/179 (9%)
Query: 40 ILVGKFPNEQEVAIKRLAWTSGQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVY 99
+ +G + VAIK L F EA+++ KL++ LV+L + E +V
Sbjct: 200 VWMGTWNGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQLYAV-VSEEPIYIVG 257
Query: 100 EFMPNKSLDSSFSGTFKDLLCLHK--------------YSRLRVIHRDLKASNILLDDQL 145
E+M SL G L L + R+ +HRDL+A+NIL+ + L
Sbjct: 258 EYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENL 317
Query: 146 NTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKIV 204
K++DFG+AR+ NE A + + E + G +IK+DV+ FG+L+ ++
Sbjct: 318 VCKVADFGLARLIEDNEYTARQGAKF-PIKWTAPEAALYGRFTIKSDVWSFGILLTELT 375
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 88/169 (52%), Gaps = 17/169 (10%)
Query: 51 VAIKRLAWTSG-QGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSLDS 109
VAIK L T+G + VEF +EA ++A + + +LV+LLG + +L V + MP+ L
Sbjct: 47 VAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSPTIQL-VTQLMPHGCL-L 104
Query: 110 SFSGTFKDLL--------CLHKYSRL------RVIHRDLKASNILLDDQLNTKISDFGMA 155
+ KD + C+ + R++HRDL A N+L+ + KI+DFG+A
Sbjct: 105 EYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLA 164
Query: 156 RIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKIV 204
R+ +E N + +M+LE + ++DV+ +GV + +++
Sbjct: 165 RLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELM 213
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 89/181 (49%), Gaps = 19/181 (10%)
Query: 40 ILVGKFPNEQEVAIKRLAWTSGQGRVE-FQNEAKLIAKLQYTNLVKLLGCSIHGEERLLV 98
+ + + +VA+K + G VE F EA ++ LQ+ LVKL + E ++
Sbjct: 204 VWMATYNKHTKVAVKTM--KPGSMSVEAFLAEANVMKTLQHDKLVKLHAV-VTKEPIYII 260
Query: 99 YEFMPNKSLDS---SFSGTFKDLLCLHKYS-----------RLRVIHRDLKASNILLDDQ 144
EFM SL S G+ + L L +S + IHRDL+A+NIL+
Sbjct: 261 TEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSAS 320
Query: 145 LNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKIV 204
L KI+DFG+AR+ NE A + + E G+ +IK+DV+ FG+L+++IV
Sbjct: 321 LVCKIADFGLARVIEDNEYTAREGAKF-PIKWTAPEAINFGSFTIKSDVWSFGILLMEIV 379
Query: 205 C 205
Sbjct: 380 T 380
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 85/179 (47%), Gaps = 17/179 (9%)
Query: 40 ILVGKFPNEQEVAIKRLAWTSGQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVY 99
+ +G + VAIK L + F EA+++ KL++ LV+L + E +V
Sbjct: 283 VWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAV-VSEEPIYIVT 340
Query: 100 EFMPNKSLDSSFSGTFKDLLCLHK--------------YSRLRVIHRDLKASNILLDDQL 145
E+M SL G L L + R+ +HRDL+A+NIL+ + L
Sbjct: 341 EYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENL 400
Query: 146 NTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKIV 204
K++DFG+AR+ NE A + + E + G +IK+DV+ FG+L+ ++
Sbjct: 401 VCKVADFGLARLIEDNEYTARQGAKF-PIKWTAPEAALYGRFTIKSDVWSFGILLTELT 458
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 88/169 (52%), Gaps = 17/169 (10%)
Query: 51 VAIKRLAWTSG-QGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSLDS 109
VAIK L T+G + VEF +EA ++A + + +LV+LLG + +L V + MP+ L
Sbjct: 70 VAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSPTIQL-VTQLMPHGCL-L 127
Query: 110 SFSGTFKDLL--------CLHKYSRL------RVIHRDLKASNILLDDQLNTKISDFGMA 155
+ KD + C+ + R++HRDL A N+L+ + KI+DFG+A
Sbjct: 128 EYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLA 187
Query: 156 RIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKIV 204
R+ +E N + +M+LE + ++DV+ +GV + +++
Sbjct: 188 RLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELM 236
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 84/179 (46%), Gaps = 30/179 (16%)
Query: 47 NEQEVAIKRLAWTSGQGRVEFQN---EAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMP 103
N + VAIK+++++ Q ++Q+ E + + KL++ N ++ GC + LV E+
Sbjct: 78 NSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCL 137
Query: 104 NKSLD---------------SSFSGTFKDLLCLHKYSRLRVIHRDLKASNILLDDQLNTK 148
+ D + G + L LH ++ +IHRD+KA NILL + K
Sbjct: 138 GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHN---MIHRDVKAGNILLSEPGLVK 194
Query: 149 ISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMS---GTVSIKTDVFGFGVLVLKIV 204
+ DFG A I A N VGT +M+ E ++ G K DV+ G+ +++
Sbjct: 195 LGDFGSASIM------APANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELA 247
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 84/179 (46%), Gaps = 30/179 (16%)
Query: 47 NEQEVAIKRLAWTSGQGRVEFQN---EAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMP 103
N + VAIK+++++ Q ++Q+ E + + KL++ N ++ GC + LV E+
Sbjct: 39 NSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCL 98
Query: 104 NKSLD---------------SSFSGTFKDLLCLHKYSRLRVIHRDLKASNILLDDQLNTK 148
+ D + G + L LH ++ +IHRD+KA NILL + K
Sbjct: 99 GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHN---MIHRDVKAGNILLSEPGLVK 155
Query: 149 ISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMS---GTVSIKTDVFGFGVLVLKIV 204
+ DFG A I A N VGT +M+ E ++ G K DV+ G+ +++
Sbjct: 156 LGDFGSASIM------APANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELA 208
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 77/162 (47%), Gaps = 26/162 (16%)
Query: 68 QNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSLDSSFSG--TFKDLLC----- 120
+ EAKL A L++ N++ L G + LV EF L+ SG D+L
Sbjct: 54 RQEAKLFAMLKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDILVNWAVQ 113
Query: 121 -------LHKYSRLRVIHRDLKASNILLDDQLNT--------KISDFGMARIFGVNESGA 165
LH + + +IHRDLK+SNIL+ ++ KI+DFG+AR +
Sbjct: 114 IARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREW----HRT 169
Query: 166 NTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKIVCGK 207
G Y +M+ E + S +DV+ +GVL+ +++ G+
Sbjct: 170 TKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGE 211
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 87/180 (48%), Gaps = 17/180 (9%)
Query: 40 ILVGKFPNEQEVAIKRLAWTSGQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVY 99
+ +G + +VAIK L F EA+++ KL++ LV+L + E +V
Sbjct: 25 VWMGTWNGNTKVAIKTLK-PGTMSPESFLEEAQIMKKLKHDKLVQLYAV-VSEEPIYIVT 82
Query: 100 EFMPNKSL-DSSFSGTFKDL-------------LCLHKYSRLRVIHRDLKASNILLDDQL 145
E+M SL D G + L + R+ IHRDL+++NIL+ + L
Sbjct: 83 EYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSANILVGNGL 142
Query: 146 NTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKIVC 205
KI+DFG+AR+ NE A + + E + G +IK+DV+ FG+L+ ++V
Sbjct: 143 ICKIADFGLARLIEDNEXTARQGAKF-PIKWTAPEAALYGRFTIKSDVWSFGILLTELVT 201
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 80/181 (44%), Gaps = 23/181 (12%)
Query: 46 PNEQEVAIKRLAWT-SGQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFM-- 102
P+ +VA+K L S Q ++F EA +I+KL + N+V+ +G S+ R ++ E M
Sbjct: 59 PSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAG 118
Query: 103 -----------PNKSLDSSFS-----GTFKDLLCLHKY-SRLRVIHRDLKASNILLD--- 142
P S SS + +D+ C +Y IHRD+ A N LL
Sbjct: 119 GDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPG 178
Query: 143 DQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLK 202
KI DFGMAR + +M E M G + KTD + FGVL+ +
Sbjct: 179 PGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWE 238
Query: 203 I 203
I
Sbjct: 239 I 239
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 80/181 (44%), Gaps = 23/181 (12%)
Query: 46 PNEQEVAIKRLAWT-SGQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFM-- 102
P+ +VA+K L S Q ++F EA +I+KL + N+V+ +G S+ R ++ E M
Sbjct: 73 PSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAG 132
Query: 103 -----------PNKSLDSSFS-----GTFKDLLCLHKY-SRLRVIHRDLKASNILL---D 142
P S SS + +D+ C +Y IHRD+ A N LL
Sbjct: 133 GDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPG 192
Query: 143 DQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLK 202
KI DFGMAR + +M E M G + KTD + FGVL+ +
Sbjct: 193 PGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWE 252
Query: 203 I 203
I
Sbjct: 253 I 253
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 46/78 (58%)
Query: 129 VIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVS 188
+IHRDLK NILL++ ++ +I+DFG A++ A N VGT Y+S E + S
Sbjct: 153 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSAS 212
Query: 189 IKTDVFGFGVLVLKIVCG 206
+D++ G ++ ++V G
Sbjct: 213 KSSDLWALGCIIYQLVAG 230
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 77/178 (43%), Gaps = 25/178 (14%)
Query: 51 VAIKRLAWTSGQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSLDSS 110
VA+K L S R +F EA+L+ LQ+ ++VK G + G+ ++V+E+M + L+
Sbjct: 46 VAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKF 105
Query: 111 FSGTFKDLLC---------------LHKYSRL----------RVIHRDLKASNILLDDQL 145
D + LH ++ +HRDL N L+ + L
Sbjct: 106 LRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENL 165
Query: 146 NTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKI 203
KI DFGM+R + + +M E M + ++DV+ GV++ +I
Sbjct: 166 LVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEI 223
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 80/174 (45%), Gaps = 24/174 (13%)
Query: 46 PNEQEVAIKRLAWTSGQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNK 105
P E+E +KR F+ E ++L + N+V ++ + LV E++
Sbjct: 48 PREKEETLKR-----------FEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGP 96
Query: 106 SL------------DSSFSGTFKDLLCLHKYSRLRVIHRDLKASNILLDDQLNTKISDFG 153
+L D++ + T + L + +R++HRD+K NIL+D KI DFG
Sbjct: 97 TLSEYIESHGPLSVDTAINFTNQILDGIKHAHDMRIVHRDIKPQNILIDSNKTLKIFDFG 156
Query: 154 MARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKIVCGK 207
+A+ S TN ++GT Y S E TD++ G+++ +++ G+
Sbjct: 157 IAKALS-ETSLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGE 209
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 79/181 (43%), Gaps = 23/181 (12%)
Query: 46 PNEQEVAIKRLAWT-SGQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFM-- 102
P+ +VA+K L S Q ++F EA +I+K + N+V+ +G S+ R ++ E M
Sbjct: 58 PSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAG 117
Query: 103 -----------PNKSLDSSFS-----GTFKDLLCLHKY-SRLRVIHRDLKASNILL---D 142
P S SS + +D+ C +Y IHRD+ A N LL
Sbjct: 118 GDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPG 177
Query: 143 DQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLK 202
KI DFGMAR + +M E M G + KTD + FGVL+ +
Sbjct: 178 PGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWE 237
Query: 203 I 203
I
Sbjct: 238 I 238
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 79/181 (43%), Gaps = 23/181 (12%)
Query: 46 PNEQEVAIKRLAWT-SGQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFM-- 102
P+ +VA+K L S Q ++F EA +I+K + N+V+ +G S+ R ++ E M
Sbjct: 50 PSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAG 109
Query: 103 -----------PNKSLDSSFS-----GTFKDLLCLHKY-SRLRVIHRDLKASNILL---D 142
P S SS + +D+ C +Y IHRD+ A N LL
Sbjct: 110 GDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPG 169
Query: 143 DQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLK 202
KI DFGMAR + +M E M G + KTD + FGVL+ +
Sbjct: 170 PGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWE 229
Query: 203 I 203
I
Sbjct: 230 I 230
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 79/181 (43%), Gaps = 23/181 (12%)
Query: 46 PNEQEVAIKRLAWT-SGQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFM-- 102
P+ +VA+K L S Q ++F EA +I+K + N+V+ +G S+ R ++ E M
Sbjct: 58 PSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAG 117
Query: 103 -----------PNKSLDSSFS-----GTFKDLLCLHKY-SRLRVIHRDLKASNILL---D 142
P S SS + +D+ C +Y IHRD+ A N LL
Sbjct: 118 GDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPG 177
Query: 143 DQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLK 202
KI DFGMAR + +M E M G + KTD + FGVL+ +
Sbjct: 178 PGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWE 237
Query: 203 I 203
I
Sbjct: 238 I 238
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 80/169 (47%), Gaps = 19/169 (11%)
Query: 68 QNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKS-LDSSFSGTF----------- 115
Q E ++++ + + K G + G + ++ E++ S LD +G F
Sbjct: 69 QQEITVLSQCDSSYVTKYYGSYLKGSKLWIIMEYLGGGSALDLLRAGPFDEFQIATMLKE 128
Query: 116 --KDLLCLHKYSRLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGT 173
K L LH + IHRD+KA+N+LL +Q + K++DFG+A + ++ N VGT
Sbjct: 129 ILKGLDYLHSEKK---IHRDIKAANVLLSEQGDVKLADFGVAG--QLTDTQIKRNTFVGT 183
Query: 174 YGYMSLEYTMSGTVSIKTDVFGFGVLVLKIVCGKKNNKSYHTERPLNLV 222
+M+ E K D++ G+ +++ G+ N H R L L+
Sbjct: 184 PFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLI 232
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 79/181 (43%), Gaps = 23/181 (12%)
Query: 46 PNEQEVAIKRLAWT-SGQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFM-- 102
P+ +VA+K L S Q ++F EA +I+K + N+V+ +G S+ R ++ E M
Sbjct: 75 PSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAG 134
Query: 103 -----------PNKSLDSSFS-----GTFKDLLCLHKY-SRLRVIHRDLKASNILLD--- 142
P S SS + +D+ C +Y IHRD+ A N LL
Sbjct: 135 GDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPG 194
Query: 143 DQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLK 202
KI DFGMAR + +M E M G + KTD + FGVL+ +
Sbjct: 195 PGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWE 254
Query: 203 I 203
I
Sbjct: 255 I 255
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 81/184 (44%), Gaps = 29/184 (15%)
Query: 46 PNEQEVAIKRLAWT-SGQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFM-- 102
P+ +VA+K L S Q ++F EA +I+K + N+V+ +G S+ R ++ E M
Sbjct: 99 PSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAG 158
Query: 103 -----------PNKSLDSSFS-----GTFKDLLCLHKY-SRLRVIHRDLKASNILL---D 142
P S SS + +D+ C +Y IHRD+ A N LL
Sbjct: 159 GDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPG 218
Query: 143 DQLNTKISDFGMARIF---GVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVL 199
KI DFGMAR G G V +M E M G + KTD + FGVL
Sbjct: 219 PGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVK---WMPPEAFMEGIFTSKTDTWSFGVL 275
Query: 200 VLKI 203
+ +I
Sbjct: 276 LWEI 279
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 79/181 (43%), Gaps = 23/181 (12%)
Query: 46 PNEQEVAIKRLAWT-SGQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFM-- 102
P+ +VA+K L S Q ++F EA +I+K + N+V+ +G S+ R ++ E M
Sbjct: 73 PSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAG 132
Query: 103 -----------PNKSLDSSFS-----GTFKDLLCLHKY-SRLRVIHRDLKASNILL---D 142
P S SS + +D+ C +Y IHRD+ A N LL
Sbjct: 133 GDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPG 192
Query: 143 DQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLK 202
KI DFGMAR + +M E M G + KTD + FGVL+ +
Sbjct: 193 PGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWE 252
Query: 203 I 203
I
Sbjct: 253 I 253
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 78/272 (28%), Positives = 122/272 (44%), Gaps = 46/272 (16%)
Query: 51 VAIKRLAWTSGQGRVEFQ-NEAKLIAKLQYTNLVKLLGCSIHGEERL-LVYEFMPN---K 105
VA+K + S +G E L+ +L++ N+V+L IH E +L LV+EFM N K
Sbjct: 33 VALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDV-IHTENKLTLVFEFMDNDLKK 91
Query: 106 SLDSSFSG-TFKDL-LCLHKYSRL------------RVIHRDLKASNILLDDQLNTKISD 151
+DS G T + L L L KY + +++HRDLK N+L++ + K+ D
Sbjct: 92 YMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENKILHRDLKPQNLLINKRGQLKLGD 151
Query: 152 FGMARIFGVNESGANTNRIVGTYGYMSLEYTM-SGTVSIKTDVFGFGVLVLKIVCGKKNN 210
FG+AR FG+ + ++ V T Y + + M S T S D++ G ++ +++ GK
Sbjct: 152 FGLARAFGIPVNTFSSE--VVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKP-- 207
Query: 211 KSYHTERPLNLVGIAWQLWNEGKDLELIDLTLDGSCPPNEDAFLLVSCVCKSKQQIDVQC 270
L+ D E + L D PNE + V+ + K I +
Sbjct: 208 -----------------LFPGTNDEEQLKLIFDIMGTPNESLWPSVTKLPKYNPNIQQRP 250
Query: 271 PMLFPCLLM----NLLPGLYLKNLHFLLMLPP 298
P +L L G + LH LL L P
Sbjct: 251 PRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNP 282
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 79/181 (43%), Gaps = 23/181 (12%)
Query: 46 PNEQEVAIKRLAWT-SGQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFM-- 102
P+ +VA+K L S Q ++F EA +I+K + N+V+ +G S+ R ++ E M
Sbjct: 59 PSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAG 118
Query: 103 -----------PNKSLDSSFS-----GTFKDLLCLHKY-SRLRVIHRDLKASNILLD--- 142
P S SS + +D+ C +Y IHRD+ A N LL
Sbjct: 119 GDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPG 178
Query: 143 DQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLK 202
KI DFGMAR + +M E M G + KTD + FGVL+ +
Sbjct: 179 PGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWE 238
Query: 203 I 203
I
Sbjct: 239 I 239
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 79/181 (43%), Gaps = 23/181 (12%)
Query: 46 PNEQEVAIKRLAWT-SGQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFM-- 102
P+ +VA+K L S Q ++F EA +I+K + N+V+ +G S+ R ++ E M
Sbjct: 85 PSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAG 144
Query: 103 -----------PNKSLDSSFS-----GTFKDLLCLHKY-SRLRVIHRDLKASNILLD--- 142
P S SS + +D+ C +Y IHRD+ A N LL
Sbjct: 145 GDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPG 204
Query: 143 DQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLK 202
KI DFGMAR + +M E M G + KTD + FGVL+ +
Sbjct: 205 PGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWE 264
Query: 203 I 203
I
Sbjct: 265 I 265
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 81/184 (44%), Gaps = 29/184 (15%)
Query: 46 PNEQEVAIKRLAWT-SGQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFM-- 102
P+ +VA+K L S Q ++F EA +I+K + N+V+ +G S+ R ++ E M
Sbjct: 76 PSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAG 135
Query: 103 -----------PNKSLDSSFS-----GTFKDLLCLHKY-SRLRVIHRDLKASNILL---D 142
P S SS + +D+ C +Y IHRD+ A N LL
Sbjct: 136 GDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPG 195
Query: 143 DQLNTKISDFGMARIF---GVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVL 199
KI DFGMAR G G V +M E M G + KTD + FGVL
Sbjct: 196 PGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVK---WMPPEAFMEGIFTSKTDTWSFGVL 252
Query: 200 VLKI 203
+ +I
Sbjct: 253 LWEI 256
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 79/181 (43%), Gaps = 23/181 (12%)
Query: 46 PNEQEVAIKRLAWT-SGQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFM-- 102
P+ +VA+K L S Q ++F EA +I+K + N+V+ +G S+ R ++ E M
Sbjct: 65 PSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAG 124
Query: 103 -----------PNKSLDSSFS-----GTFKDLLCLHKY-SRLRVIHRDLKASNILLD--- 142
P S SS + +D+ C +Y IHRD+ A N LL
Sbjct: 125 GDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPG 184
Query: 143 DQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLK 202
KI DFGMAR + +M E M G + KTD + FGVL+ +
Sbjct: 185 PGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWE 244
Query: 203 I 203
I
Sbjct: 245 I 245
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 79/181 (43%), Gaps = 23/181 (12%)
Query: 46 PNEQEVAIKRLAWT-SGQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFM-- 102
P+ +VA+K L S Q ++F EA +I+K + N+V+ +G S+ R ++ E M
Sbjct: 73 PSPLQVAVKTLPEVYSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAG 132
Query: 103 -----------PNKSLDSSFS-----GTFKDLLCLHKY-SRLRVIHRDLKASNILL---D 142
P S SS + +D+ C +Y IHRD+ A N LL
Sbjct: 133 GDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPG 192
Query: 143 DQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLK 202
KI DFGMAR + +M E M G + KTD + FGVL+ +
Sbjct: 193 PGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWE 252
Query: 203 I 203
I
Sbjct: 253 I 253
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 83/192 (43%), Gaps = 15/192 (7%)
Query: 30 IQQEQTRDRVILVGKFPNEQEVAIKRLAWTS--GQGRVEF-QNEAKLIAKLQYTNLVKLL 86
I E + V+L + +E AIK L + +V + E ++++L + VKL
Sbjct: 44 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY 103
Query: 87 GCSIHGEERLLVYEFMPNKSL------DSSFSGTFKDLLCLHKYSRLR------VIHRDL 134
C E+ + N L SF T S L +IHRDL
Sbjct: 104 FCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDL 163
Query: 135 KASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVF 194
K NILL++ ++ +I+DFG A++ A N VGT Y+S E + +D++
Sbjct: 164 KPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLW 223
Query: 195 GFGVLVLKIVCG 206
G ++ ++V G
Sbjct: 224 ALGCIIYQLVAG 235
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 45/78 (57%)
Query: 129 VIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVS 188
+IHRDLK NILL++ ++ +I+DFG A++ A N VGT Y+S E +
Sbjct: 131 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAC 190
Query: 189 IKTDVFGFGVLVLKIVCG 206
+D++ G ++ ++V G
Sbjct: 191 KSSDLWALGCIIYQLVAG 208
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 45/78 (57%)
Query: 129 VIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVS 188
+IHRDLK NILL++ ++ +I+DFG A++ A N VGT Y+S E +
Sbjct: 130 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAC 189
Query: 189 IKTDVFGFGVLVLKIVCG 206
+D++ G ++ ++V G
Sbjct: 190 KSSDLWALGCIIYQLVAG 207
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 45/78 (57%)
Query: 129 VIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVS 188
+IHRDLK NILL++ ++ +I+DFG A++ A N VGT Y+S E +
Sbjct: 129 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAC 188
Query: 189 IKTDVFGFGVLVLKIVCG 206
+D++ G ++ ++V G
Sbjct: 189 KSSDLWALGCIIYQLVAG 206
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 45/78 (57%)
Query: 129 VIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVS 188
+IHRDLK NILL++ ++ +I+DFG A++ A N VGT Y+S E +
Sbjct: 128 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAC 187
Query: 189 IKTDVFGFGVLVLKIVCG 206
+D++ G ++ ++V G
Sbjct: 188 KSSDLWALGCIIYQLVAG 205
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 87/179 (48%), Gaps = 17/179 (9%)
Query: 39 VILVGKFPNEQEVAIKRLAWTSGQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLV 98
++ +G + N+ +VAIK + +F EA+++ KL + LV+L G + LV
Sbjct: 25 LVHLGYWLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLV 83
Query: 99 YEFMPNKSLDSSFSGTFKDL--------LCLHKYSRLR------VIHRDLKASNILLDDQ 144
+EFM + L S + T + L +CL + VIHRDL A N L+ +
Sbjct: 84 FEFMEHGCL-SDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGEN 142
Query: 145 LNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKI 203
K+SDFGM R F +++ ++ + S E S K+DV+ FGVL+ ++
Sbjct: 143 QVIKVSDFGMTR-FVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEV 200
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 78/181 (43%), Gaps = 23/181 (12%)
Query: 48 EQEVAIKRL-AWTSGQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKS 106
E VAIK + S + R+EF NEA ++ + ++V+LLG G+ L++ E M
Sbjct: 40 ETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGD 99
Query: 107 LDSSFSGTFKDL-----LCLHKYSRL-----------------RVIHRDLKASNILLDDQ 144
L S ++ L S++ + +HRDL A N ++ +
Sbjct: 100 LKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAED 159
Query: 145 LNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKIV 204
KI DFGM R + + + +MS E G + +DV+ FGV++ +I
Sbjct: 160 FTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIA 219
Query: 205 C 205
Sbjct: 220 T 220
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 87/179 (48%), Gaps = 17/179 (9%)
Query: 39 VILVGKFPNEQEVAIKRLAWTSGQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLV 98
++ +G + N+ +VAIK + +F EA+++ KL + LV+L G + LV
Sbjct: 20 LVHLGYWLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLV 78
Query: 99 YEFMPNKSLDSSFSGTFKDL--------LCLHKYSRLR------VIHRDLKASNILLDDQ 144
+EFM + L S + T + L +CL + VIHRDL A N L+ +
Sbjct: 79 FEFMEHGCL-SDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGEN 137
Query: 145 LNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKI 203
K+SDFGM R F +++ ++ + S E S K+DV+ FGVL+ ++
Sbjct: 138 QVIKVSDFGMTR-FVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEV 195
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 88/181 (48%), Gaps = 29/181 (16%)
Query: 40 ILVGKFPNEQEVAIKRLAWTSGQGRVE-FQNEAKLIAKLQYTNLVKLLGCSIHGEERLLV 98
+ + + +VA+K + G VE F EA ++ LQ+ LVKL + E ++
Sbjct: 198 VWMATYNKHTKVAVKTM--KPGSMSVEAFLAEANVMKTLQHDKLVKLHAV-VTKEPIYII 254
Query: 99 YEFMPNKSLDS---SFSGTFKDLLCLHKYS-----------RLRVIHRDLKASNILLDDQ 144
EFM SL S G+ + L L +S + IHRDL+A+NIL+
Sbjct: 255 TEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSAS 314
Query: 145 LNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKIV 204
L KI+DFG+AR+ GA + + E G+ +IK+DV+ FG+L+++IV
Sbjct: 315 LVCKIADFGLARV------GAKF-----PIKWTAPEAINFGSFTIKSDVWSFGILLMEIV 363
Query: 205 C 205
Sbjct: 364 T 364
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 45/78 (57%)
Query: 129 VIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVS 188
+IHRDLK NILL++ ++ +I+DFG A++ A N VGT Y+S E +
Sbjct: 135 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAC 194
Query: 189 IKTDVFGFGVLVLKIVCG 206
+D++ G ++ ++V G
Sbjct: 195 KSSDLWALGCIIYQLVAG 212
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 84/180 (46%), Gaps = 16/180 (8%)
Query: 51 VAIKRLAWTSGQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSLDSS 110
VA+K++ Q R NE ++ Q+ N+V++ + G+E +V EF+ +L
Sbjct: 57 VAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDI 116
Query: 111 FSGTFKD--------LLCLHKYSRLR---VIHRDLKASNILLDDQLNTKISDFGMARIFG 159
+ T + L L S L VIHRD+K+ +ILL K+SDFG
Sbjct: 117 VTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFC--AQ 174
Query: 160 VNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKIVCGKKNNKSYHTERPL 219
V++ +VGT +M+ E + D++ G++V+++V G+ Y E PL
Sbjct: 175 VSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGE---PPYFNEPPL 231
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 45/78 (57%)
Query: 129 VIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVS 188
+IHRDLK NILL++ ++ +I+DFG A++ A N VGT Y+S E +
Sbjct: 154 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSAC 213
Query: 189 IKTDVFGFGVLVLKIVCG 206
+D++ G ++ ++V G
Sbjct: 214 KSSDLWALGCIIYQLVAG 231
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 84/180 (46%), Gaps = 16/180 (8%)
Query: 51 VAIKRLAWTSGQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSLDSS 110
VA+K++ Q R NE ++ Q+ N+V++ + G+E +V EF+ +L
Sbjct: 59 VAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDI 118
Query: 111 FSGTFKD--------LLCLHKYSRLR---VIHRDLKASNILLDDQLNTKISDFGMARIFG 159
+ T + L L S L VIHRD+K+ +ILL K+SDFG
Sbjct: 119 VTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFC--AQ 176
Query: 160 VNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKIVCGKKNNKSYHTERPL 219
V++ +VGT +M+ E + D++ G++V+++V G+ Y E PL
Sbjct: 177 VSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGE---PPYFNEPPL 233
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 87/179 (48%), Gaps = 17/179 (9%)
Query: 39 VILVGKFPNEQEVAIKRLAWTSGQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLV 98
++ +G + N+ +VAIK + +F EA+++ KL + LV+L G + LV
Sbjct: 22 LVHLGYWLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLV 80
Query: 99 YEFMPNKSLDSSFSGTFKDL--------LCLHKYSRLR------VIHRDLKASNILLDDQ 144
+EFM + L S + T + L +CL + VIHRDL A N L+ +
Sbjct: 81 FEFMEHGCL-SDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGEN 139
Query: 145 LNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKI 203
K+SDFGM R F +++ ++ + S E S K+DV+ FGVL+ ++
Sbjct: 140 QVIKVSDFGMTR-FVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEV 197
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 84/180 (46%), Gaps = 16/180 (8%)
Query: 51 VAIKRLAWTSGQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSLDSS 110
VA+K++ Q R NE ++ Q+ N+V++ + G+E +V EF+ +L
Sbjct: 48 VAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDI 107
Query: 111 FSGTFKD--------LLCLHKYSRLR---VIHRDLKASNILLDDQLNTKISDFGMARIFG 159
+ T + L L S L VIHRD+K+ +ILL K+SDFG
Sbjct: 108 VTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCA--Q 165
Query: 160 VNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKIVCGKKNNKSYHTERPL 219
V++ +VGT +M+ E + D++ G++V+++V G+ Y E PL
Sbjct: 166 VSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGE---PPYFNEPPL 222
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 45/78 (57%)
Query: 129 VIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVS 188
+IHRDLK NILL++ ++ +I+DFG A++ A N VGT Y+S E +
Sbjct: 151 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAC 210
Query: 189 IKTDVFGFGVLVLKIVCG 206
+D++ G ++ ++V G
Sbjct: 211 KSSDLWALGCIIYQLVAG 228
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 45/78 (57%)
Query: 129 VIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVS 188
+IHRDLK NILL++ ++ +I+DFG A++ A N VGT Y+S E +
Sbjct: 153 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAC 212
Query: 189 IKTDVFGFGVLVLKIVCG 206
+D++ G ++ ++V G
Sbjct: 213 KSSDLWALGCIIYQLVAG 230
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 77/183 (42%), Gaps = 27/183 (14%)
Query: 48 EQEVAIKRL-AWTSGQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKS 106
E VAIK + S + R+EF NEA ++ + ++V+LLG G+ L++ E M
Sbjct: 49 ETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGD 108
Query: 107 LDS------------------------SFSGTFKDLLCLHKYSRLRVIHRDLKASNILLD 142
L S +G D + ++ +HRDL A N ++
Sbjct: 109 LKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKF--VHRDLAARNCMVA 166
Query: 143 DQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLK 202
+ KI DFGM R + + + +MS E G + +DV+ FGV++ +
Sbjct: 167 EDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWE 226
Query: 203 IVC 205
I
Sbjct: 227 IAT 229
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 45/78 (57%)
Query: 129 VIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVS 188
+IHRDLK NILL++ ++ +I+DFG A++ A N VGT Y+S E +
Sbjct: 151 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAC 210
Query: 189 IKTDVFGFGVLVLKIVCG 206
+D++ G ++ ++V G
Sbjct: 211 KSSDLWALGCIIYQLVAG 228
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 84/180 (46%), Gaps = 16/180 (8%)
Query: 51 VAIKRLAWTSGQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSLDSS 110
VA+K++ Q R NE ++ Q+ N+V++ + G+E +V EF+ +L
Sbjct: 179 VAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDI 238
Query: 111 FSGTFKD--------LLCLHKYSRLR---VIHRDLKASNILLDDQLNTKISDFGMARIFG 159
+ T + L L S L VIHRD+K+ +ILL K+SDFG
Sbjct: 239 VTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFC--AQ 296
Query: 160 VNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKIVCGKKNNKSYHTERPL 219
V++ +VGT +M+ E + D++ G++V+++V G+ Y E PL
Sbjct: 297 VSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGE---PPYFNEPPL 353
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 45/78 (57%)
Query: 129 VIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVS 188
+IHRDLK NILL++ ++ +I+DFG A++ A N VGT Y+S E +
Sbjct: 150 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSAC 209
Query: 189 IKTDVFGFGVLVLKIVCG 206
+D++ G ++ ++V G
Sbjct: 210 KSSDLWALGCIIYQLVAG 227
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 45/78 (57%)
Query: 129 VIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVS 188
+IHRDLK NILL++ ++ +I+DFG A++ A N VGT Y+S E +
Sbjct: 153 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAC 212
Query: 189 IKTDVFGFGVLVLKIVCG 206
+D++ G ++ ++V G
Sbjct: 213 KSSDLWALGCIIYQLVAG 230
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 45/78 (57%)
Query: 129 VIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVS 188
+IHRDLK NILL++ ++ +I+DFG A++ A N VGT Y+S E +
Sbjct: 151 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAC 210
Query: 189 IKTDVFGFGVLVLKIVCG 206
+D++ G ++ ++V G
Sbjct: 211 KSSDLWALGCIIYQLVAG 228
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 86/179 (48%), Gaps = 17/179 (9%)
Query: 39 VILVGKFPNEQEVAIKRLAWTSGQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLV 98
++ +G + N+ +VAIK + +F EA+++ KL + LV+L G + LV
Sbjct: 22 LVHLGYWLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLV 80
Query: 99 YEFMPNKSLDSSFSGTFKDL--------LCLH------KYSRLRVIHRDLKASNILLDDQ 144
+EFM + L S + T + L +CL VIHRDL A N L+ +
Sbjct: 81 FEFMEHGCL-SDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEASVIHRDLAARNCLVGEN 139
Query: 145 LNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKI 203
K+SDFGM R F +++ ++ + S E S K+DV+ FGVL+ ++
Sbjct: 140 QVIKVSDFGMTR-FVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEV 197
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 45/78 (57%)
Query: 129 VIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVS 188
+IHRDLK NILL++ ++ +I+DFG A++ A N VGT Y+S E +
Sbjct: 154 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAC 213
Query: 189 IKTDVFGFGVLVLKIVCG 206
+D++ G ++ ++V G
Sbjct: 214 KSSDLWALGCIIYQLVAG 231
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 45/78 (57%)
Query: 129 VIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVS 188
+IHRDLK NILL++ ++ +I+DFG A++ A N VGT Y+S E +
Sbjct: 153 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAX 212
Query: 189 IKTDVFGFGVLVLKIVCG 206
+D++ G ++ ++V G
Sbjct: 213 KSSDLWALGCIIYQLVAG 230
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 45/78 (57%)
Query: 129 VIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVS 188
+IHRDLK NILL++ ++ +I+DFG A++ A N VGT Y+S E +
Sbjct: 151 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPELLTEKSAC 210
Query: 189 IKTDVFGFGVLVLKIVCG 206
+D++ G ++ ++V G
Sbjct: 211 KSSDLWALGCIIYQLVAG 228
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 45/78 (57%)
Query: 129 VIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVS 188
+IHRDLK NILL++ ++ +I+DFG A++ A N VGT Y+S E +
Sbjct: 150 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAC 209
Query: 189 IKTDVFGFGVLVLKIVCG 206
+D++ G ++ ++V G
Sbjct: 210 KSSDLWALGCIIYQLVAG 227
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 78/181 (43%), Gaps = 28/181 (15%)
Query: 51 VAIKRLAWTSGQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSLDSS 110
VA+K L + R +FQ EA+L+ LQ+ ++VK G G+ ++V+E+M + L+
Sbjct: 48 VAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKF 107
Query: 111 FSGTFKDLLC------------------LHKYSRL----------RVIHRDLKASNILLD 142
D + LH S++ +HRDL N L+
Sbjct: 108 LRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVG 167
Query: 143 DQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLK 202
L KI DFGM+R + + +M E M + ++DV+ FGV++ +
Sbjct: 168 ANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWE 227
Query: 203 I 203
I
Sbjct: 228 I 228
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 45/78 (57%)
Query: 129 VIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVS 188
+IHRDLK NILL++ ++ +I+DFG A++ A N VGT Y+S E +
Sbjct: 153 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAC 212
Query: 189 IKTDVFGFGVLVLKIVCG 206
+D++ G ++ ++V G
Sbjct: 213 KSSDLWALGCIIYQLVAG 230
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 79/152 (51%), Gaps = 17/152 (11%)
Query: 70 EAKLIAKLQYTNLVKLLGCSIHGEERL-LVYEFMPN---KSLDSSFSGTFKDLLCLHKYS 125
E L+ +L + N+V L+ IH E L LV+EFM K LD + +G + ++ Y
Sbjct: 69 EISLLKELHHPNIVSLIDV-IHSERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQ 127
Query: 126 RLR---------VIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGY 176
LR ++HRDLK N+L++ K++DFG+AR FG+ + T+ +V T Y
Sbjct: 128 LLRGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLARAFGI-PVRSYTHEVV-TLWY 185
Query: 177 MSLEYTM-SGTVSIKTDVFGFGVLVLKIVCGK 207
+ + M S S D++ G + +++ GK
Sbjct: 186 RAPDVLMGSKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 79/152 (51%), Gaps = 17/152 (11%)
Query: 70 EAKLIAKLQYTNLVKLLGCSIHGEERL-LVYEFMPN---KSLDSSFSGTFKDLLCLHKYS 125
E L+ +L + N+V L+ IH E L LV+EFM K LD + +G + ++ Y
Sbjct: 69 EISLLKELHHPNIVSLIDV-IHSERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQ 127
Query: 126 RLR---------VIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGY 176
LR ++HRDLK N+L++ K++DFG+AR FG+ + T+ +V T Y
Sbjct: 128 LLRGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLARAFGI-PVRSYTHEVV-TLWY 185
Query: 177 MSLEYTM-SGTVSIKTDVFGFGVLVLKIVCGK 207
+ + M S S D++ G + +++ GK
Sbjct: 186 RAPDVLMGSKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 84/180 (46%), Gaps = 16/180 (8%)
Query: 51 VAIKRLAWTSGQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSLDSS 110
VA+K++ Q R NE ++ Q+ N+V++ + G+E +V EF+ +L
Sbjct: 102 VAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDI 161
Query: 111 FSGTFKD--------LLCLHKYSRLR---VIHRDLKASNILLDDQLNTKISDFGMARIFG 159
+ T + L L S L VIHRD+K+ +ILL K+SDFG
Sbjct: 162 VTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFC--AQ 219
Query: 160 VNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKIVCGKKNNKSYHTERPL 219
V++ +VGT +M+ E + D++ G++V+++V G+ Y E PL
Sbjct: 220 VSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGE---PPYFNEPPL 276
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 90/188 (47%), Gaps = 28/188 (14%)
Query: 51 VAIKRLAWTSGQGRVEFQNEAKLIAKLQYTNLVKLLG-CSIHGEERL-LVYEFMPNKSLD 108
VA+K+L ++ + +F+ E +++ LQ+ N+VK G C G L L+ E++P SL
Sbjct: 42 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 101
Query: 109 SSFSGTFK--DLLCLHKYSRL-----------RVIHRDLKASNILLDDQLNTKISDFGMA 155
+ D + L +Y+ R IHRDL NIL++++ KI DFG+
Sbjct: 102 DYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 161
Query: 156 RI-------FGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKIVCGKK 208
++ F V E G + + Y T S S+ +DV+ FGV++ ++ +
Sbjct: 162 KVLPQDKEFFKVKEPGESP-----IFWYAPESLTES-KFSVASDVWSFGVVLYELFTYIE 215
Query: 209 NNKSYHTE 216
+KS E
Sbjct: 216 KSKSPPAE 223
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 84/180 (46%), Gaps = 16/180 (8%)
Query: 51 VAIKRLAWTSGQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSLDSS 110
VA+K++ Q R NE ++ Q+ N+V++ + G+E +V EF+ +L
Sbjct: 52 VAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDI 111
Query: 111 FSGTFKD--------LLCLHKYSRLR---VIHRDLKASNILLDDQLNTKISDFGMARIFG 159
+ T + L L S L VIHRD+K+ +ILL K+SDFG
Sbjct: 112 VTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCA--Q 169
Query: 160 VNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKIVCGKKNNKSYHTERPL 219
V++ +VGT +M+ E + D++ G++V+++V G+ Y E PL
Sbjct: 170 VSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGE---PPYFNEPPL 226
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 45/78 (57%)
Query: 129 VIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVS 188
+IHRDLK NILL++ ++ +I+DFG A++ A N VGT Y+S E +
Sbjct: 156 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAC 215
Query: 189 IKTDVFGFGVLVLKIVCG 206
+D++ G ++ ++V G
Sbjct: 216 KSSDLWALGCIIYQLVAG 233
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 85/170 (50%), Gaps = 17/170 (10%)
Query: 52 AIKRLAWTSGQGRV-EFQNEAKLIAKLQYTNLVKLLGCSIHGE-ERLLVYEFMPNKSL-- 107
A+K L + G V +F E ++ + N++ LLG + E L+V +M + L
Sbjct: 61 AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 120
Query: 108 ---DSSFSGTFKDLLCL-------HKY-SRLRVIHRDLKASNILLDDQLNTKISDFGMAR 156
+ + + T KDL+ KY + + +HRDL A N +LD++ K++DFG+AR
Sbjct: 121 FIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 180
Query: 157 IFGVNESGANTNRIVG--TYGYMSLEYTMSGTVSIKTDVFGFGVLVLKIV 204
E + N+ +M+LE + + K+DV+ FGVL+ +++
Sbjct: 181 DMYDKEXXSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELM 230
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 88/179 (49%), Gaps = 17/179 (9%)
Query: 39 VILVGKFPNEQEVAIKRLAWTSGQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLV 98
++ +G + N+ +VAIK + S +F EA+++ KL + LV+L G + LV
Sbjct: 42 LVHLGYWLNKDKVAIKTIKEGS-MSEDDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLV 100
Query: 99 YEFMPNKSLDSSFSGTFKDL--------LCLHKYSRLR------VIHRDLKASNILLDDQ 144
+EFM + L S + T + L +CL + VIHRDL A N L+ +
Sbjct: 101 FEFMEHGCL-SDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGEN 159
Query: 145 LNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKI 203
K+SDFGM R F +++ ++ + S E S K+DV+ FGVL+ ++
Sbjct: 160 QVIKVSDFGMTR-FVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEV 217
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 45/78 (57%)
Query: 129 VIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVS 188
+IHRDLK NILL++ ++ +I+DFG A++ A N VGT Y+S E +
Sbjct: 153 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAC 212
Query: 189 IKTDVFGFGVLVLKIVCG 206
+D++ G ++ ++V G
Sbjct: 213 KSSDLWALGCIIYQLVAG 230
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 85/182 (46%), Gaps = 16/182 (8%)
Query: 49 QEVAIKRLAWTSGQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSLD 108
QEVAI+++ + NE ++ + + N+V L + G+E +V E++ SL
Sbjct: 46 QEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLT 105
Query: 109 SSFSGTFKD--------LLCLHKYSRL---RVIHRDLKASNILLDDQLNTKISDFGMARI 157
+ T D CL L +VIHRD+K+ NILL + K++DFG
Sbjct: 106 DVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQ 165
Query: 158 FGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKIVCGKKNNKSYHTER 217
+S +T +VGT +M+ E K D++ G++ ++++ G+ Y E
Sbjct: 166 ITPEQSKRST--MVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGE---PPYLNEN 220
Query: 218 PL 219
PL
Sbjct: 221 PL 222
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 79/181 (43%), Gaps = 23/181 (12%)
Query: 46 PNEQEVAIKRLAWT-SGQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFM-- 102
P+ +VA+K L S Q ++F EA +I+K + N+V+ +G S+ R ++ E M
Sbjct: 59 PSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAG 118
Query: 103 -----------PNKSLDSSFS-----GTFKDLLCLHKY-SRLRVIHRDLKASNILLD--- 142
P S SS + +D+ C +Y IHRD+ A N LL
Sbjct: 119 GDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPG 178
Query: 143 DQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLK 202
KI DFGMA+ + +M E M G + KTD + FGVL+ +
Sbjct: 179 PGRVAKIGDFGMAQDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWE 238
Query: 203 I 203
I
Sbjct: 239 I 239
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 52/95 (54%), Gaps = 2/95 (2%)
Query: 128 RVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTV 187
R IHRD+KA+N+LL +Q + K++DFG+A + ++ N VGT +M+ E
Sbjct: 136 RKIHRDIKAANVLLSEQGDVKLADFGVAG--QLTDTQIKRNXFVGTPFWMAPEVIKQSAY 193
Query: 188 SIKTDVFGFGVLVLKIVCGKKNNKSYHTERPLNLV 222
K D++ G+ +++ G+ N H R L L+
Sbjct: 194 DFKADIWSLGITAIELAKGEPPNSDLHPMRVLFLI 228
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 80/178 (44%), Gaps = 15/178 (8%)
Query: 39 VILVGKFPNEQEVAIKRLAWTSGQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLV 98
V+ GK+ + +VAIK + EF EAK++ L + LV+L G ++
Sbjct: 39 VVKYGKWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFII 97
Query: 99 YEFMPNKSL------------DSSFSGTFKDLLCLHKY-SRLRVIHRDLKASNILLDDQL 145
E+M N L KD+ +Y + +HRDL A N L++DQ
Sbjct: 98 TEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQG 157
Query: 146 NTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKI 203
K+SDFG++R +E ++ + E M S K+D++ FGVL+ +I
Sbjct: 158 VVKVSDFGLSRYVLDDEETSSVGSKFPVR-WSPPEVLMYSKFSSKSDIWAFGVLMWEI 214
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 89/188 (47%), Gaps = 28/188 (14%)
Query: 51 VAIKRLAWTSGQGRVEFQNEAKLIAKLQYTNLVKLLG-CSIHGEERL-LVYEFMPNKSLD 108
VA+K+L ++ + +F+ E +++ LQ+ N+VK G C G L L+ E++P SL
Sbjct: 45 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 104
Query: 109 SSFSGTFK--DLLCLHKYSRL-----------RVIHRDLKASNILLDDQLNTKISDFGMA 155
+ D + L +Y+ R IHRDL NIL++++ KI DFG+
Sbjct: 105 DYLQAHAERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 164
Query: 156 RIF-------GVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKIVCGKK 208
++ V E G + + Y T S S+ +DV+ FGV++ ++ +
Sbjct: 165 KVLPQDKEXXKVKEPGESP-----IFWYAPESLTES-KFSVASDVWSFGVVLYELFTYIE 218
Query: 209 NNKSYHTE 216
+KS E
Sbjct: 219 KSKSPPAE 226
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 89/188 (47%), Gaps = 28/188 (14%)
Query: 51 VAIKRLAWTSGQGRVEFQNEAKLIAKLQYTNLVKLLG-CSIHGEERL-LVYEFMPNKSLD 108
VA+K+L ++ + +F+ E +++ LQ+ N+VK G C G L L+ EF+P SL
Sbjct: 45 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEFLPYGSLR 104
Query: 109 SSFSGTFK--DLLCLHKYSRL-----------RVIHRDLKASNILLDDQLNTKISDFGMA 155
+ D + L +Y+ R IHRDL NIL++++ KI DFG+
Sbjct: 105 EYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 164
Query: 156 RIF-------GVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKIVCGKK 208
++ V E G + + Y T S S+ +DV+ FGV++ ++ +
Sbjct: 165 KVLPQDKEXXKVKEPGESP-----IFWYAPESLTES-KFSVASDVWSFGVVLYELFTYIE 218
Query: 209 NNKSYHTE 216
+KS E
Sbjct: 219 KSKSPPAE 226
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 82/178 (46%), Gaps = 15/178 (8%)
Query: 39 VILVGKFPNEQEVAIKRLAWTSGQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLV 98
V+ GK+ + +VAIK + EF EAK++ L + LV+L G ++
Sbjct: 23 VVKYGKWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFII 81
Query: 99 YEFMPN-------KSLDSSFSG-----TFKDLLCLHKY-SRLRVIHRDLKASNILLDDQL 145
E+M N + + F KD+ +Y + +HRDL A N L++DQ
Sbjct: 82 TEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQG 141
Query: 146 NTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKI 203
K+SDFG++R +E ++ + E M S K+D++ FGVL+ +I
Sbjct: 142 VVKVSDFGLSRYVLDDEYTSSVGSKFPV-RWSPPEVLMYSKFSSKSDIWAFGVLMWEI 198
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 82/178 (46%), Gaps = 15/178 (8%)
Query: 39 VILVGKFPNEQEVAIKRLAWTSGQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLV 98
V+ GK+ + +VAIK + EF EAK++ L + LV+L G ++
Sbjct: 24 VVKYGKWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFII 82
Query: 99 YEFMPNKSL------------DSSFSGTFKDLLCLHKY-SRLRVIHRDLKASNILLDDQL 145
E+M N L KD+ +Y + +HRDL A N L++DQ
Sbjct: 83 TEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQG 142
Query: 146 NTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKI 203
K+SDFG++R + +++ ++ + E M S K+D++ FGVL+ +I
Sbjct: 143 VVKVSDFGLSR-YVLDDEYTSSRGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEI 199
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 78/181 (43%), Gaps = 23/181 (12%)
Query: 48 EQEVAIKRL-AWTSGQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKS 106
E VAIK + S + R+EF NEA ++ + ++V+LLG G+ L++ E M
Sbjct: 55 ETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGD 114
Query: 107 LDSSFSGTFKDL-----LCLHKYSRL-----------------RVIHRDLKASNILLDDQ 144
L S ++ L S++ + +HRDL A N ++ +
Sbjct: 115 LKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAED 174
Query: 145 LNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKIV 204
KI DFGM R + + + +MS E G + +DV+ FGV++ +I
Sbjct: 175 FTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIA 234
Query: 205 C 205
Sbjct: 235 T 235
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 80/178 (44%), Gaps = 15/178 (8%)
Query: 39 VILVGKFPNEQEVAIKRLAWTSGQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLV 98
V+ GK+ + +VAIK + EF EAK++ L + LV+L G ++
Sbjct: 24 VVKYGKWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFII 82
Query: 99 YEFMPNKSL------------DSSFSGTFKDLLCLHKY-SRLRVIHRDLKASNILLDDQL 145
E+M N L KD+ +Y + +HRDL A N L++DQ
Sbjct: 83 TEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQG 142
Query: 146 NTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKI 203
K+SDFG++R +E ++ + E M S K+D++ FGVL+ +I
Sbjct: 143 VVKVSDFGLSRYVLDDEYTSSVGSKFPV-RWSPPEVLMYSKFSSKSDIWAFGVLMWEI 199
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 80/178 (44%), Gaps = 15/178 (8%)
Query: 39 VILVGKFPNEQEVAIKRLAWTSGQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLV 98
V+ GK+ + +VAIK + EF EAK++ L + LV+L G ++
Sbjct: 19 VVKYGKWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFII 77
Query: 99 YEFMPNKSL------------DSSFSGTFKDLLCLHKY-SRLRVIHRDLKASNILLDDQL 145
E+M N L KD+ +Y + +HRDL A N L++DQ
Sbjct: 78 TEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQG 137
Query: 146 NTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKI 203
K+SDFG++R +E ++ + E M S K+D++ FGVL+ +I
Sbjct: 138 VVKVSDFGLSRYVLDDEYTSSVGSKFPV-RWSPPEVLMYSKFSSKSDIWAFGVLMWEI 194
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 85/170 (50%), Gaps = 17/170 (10%)
Query: 52 AIKRLAWTSGQGRV-EFQNEAKLIAKLQYTNLVKLLGCSIHGE-ERLLVYEFMPNKSL-- 107
A+K L + G V +F E ++ + N++ LLG + E L+V +M + L
Sbjct: 81 AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 140
Query: 108 ---DSSFSGTFKDLLCL-------HKY-SRLRVIHRDLKASNILLDDQLNTKISDFGMAR 156
+ + + T KDL+ KY + + +HRDL A N +LD++ K++DFG+AR
Sbjct: 141 FIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 200
Query: 157 IFGVNESGANTNRIVG--TYGYMSLEYTMSGTVSIKTDVFGFGVLVLKIV 204
E + N+ +M+LE + + K+DV+ FGVL+ +++
Sbjct: 201 DMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELM 250
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 85/170 (50%), Gaps = 17/170 (10%)
Query: 52 AIKRLAWTSGQGRV-EFQNEAKLIAKLQYTNLVKLLGCSIHGE-ERLLVYEFMPNKSL-- 107
A+K L + G V +F E ++ + N++ LLG + E L+V +M + L
Sbjct: 62 AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 121
Query: 108 ---DSSFSGTFKDLLCL-------HKY-SRLRVIHRDLKASNILLDDQLNTKISDFGMAR 156
+ + + T KDL+ KY + + +HRDL A N +LD++ K++DFG+AR
Sbjct: 122 FIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 181
Query: 157 IFGVNESGANTNRIVG--TYGYMSLEYTMSGTVSIKTDVFGFGVLVLKIV 204
E + N+ +M+LE + + K+DV+ FGVL+ +++
Sbjct: 182 DMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELM 231
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 85/170 (50%), Gaps = 17/170 (10%)
Query: 52 AIKRLAWTSGQGRV-EFQNEAKLIAKLQYTNLVKLLGCSIHGE-ERLLVYEFMPNKSL-- 107
A+K L + G V +F E ++ + N++ LLG + E L+V +M + L
Sbjct: 57 AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 116
Query: 108 ---DSSFSGTFKDLLCL-------HKY-SRLRVIHRDLKASNILLDDQLNTKISDFGMAR 156
+ + + T KDL+ KY + + +HRDL A N +LD++ K++DFG+AR
Sbjct: 117 FIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 176
Query: 157 IFGVNESGANTNRIVG--TYGYMSLEYTMSGTVSIKTDVFGFGVLVLKIV 204
E + N+ +M+LE + + K+DV+ FGVL+ +++
Sbjct: 177 DMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELM 226
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 86/179 (48%), Gaps = 17/179 (9%)
Query: 39 VILVGKFPNEQEVAIKRLAWTSGQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLV 98
++ +G + N+ +VAIK + +F EA+++ KL + LV+L G + LV
Sbjct: 23 LVHLGYWLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLV 81
Query: 99 YEFMPNKSLDSSFSGTFKDL--------LCLHKYSRLR------VIHRDLKASNILLDDQ 144
EFM + L S + T + L +CL + VIHRDL A N L+ +
Sbjct: 82 TEFMEHGCL-SDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGEN 140
Query: 145 LNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKI 203
K+SDFGM R F +++ ++ + S E S K+DV+ FGVL+ ++
Sbjct: 141 QVIKVSDFGMTR-FVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEV 198
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 85/170 (50%), Gaps = 17/170 (10%)
Query: 52 AIKRLAWTSGQGRV-EFQNEAKLIAKLQYTNLVKLLGCSIHGE-ERLLVYEFMPNKSL-- 107
A+K L + G V +F E ++ + N++ LLG + E L+V +M + L
Sbjct: 61 AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 120
Query: 108 ---DSSFSGTFKDLLCL-------HKY-SRLRVIHRDLKASNILLDDQLNTKISDFGMAR 156
+ + + T KDL+ KY + + +HRDL A N +LD++ K++DFG+AR
Sbjct: 121 FIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 180
Query: 157 IFGVNESGANTNRIVG--TYGYMSLEYTMSGTVSIKTDVFGFGVLVLKIV 204
E + N+ +M+LE + + K+DV+ FGVL+ +++
Sbjct: 181 DMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELM 230
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 85/170 (50%), Gaps = 17/170 (10%)
Query: 52 AIKRLAWTSGQGRV-EFQNEAKLIAKLQYTNLVKLLGCSIHGE-ERLLVYEFMPNKSL-- 107
A+K L + G V +F E ++ + N++ LLG + E L+V +M + L
Sbjct: 62 AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 121
Query: 108 ---DSSFSGTFKDLLCL-------HKY-SRLRVIHRDLKASNILLDDQLNTKISDFGMAR 156
+ + + T KDL+ KY + + +HRDL A N +LD++ K++DFG+AR
Sbjct: 122 FIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 181
Query: 157 IFGVNESGANTNRIVG--TYGYMSLEYTMSGTVSIKTDVFGFGVLVLKIV 204
E + N+ +M+LE + + K+DV+ FGVL+ +++
Sbjct: 182 DMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELM 231
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 80/178 (44%), Gaps = 15/178 (8%)
Query: 39 VILVGKFPNEQEVAIKRLAWTSGQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLV 98
V+ GK+ + +VAIK + EF EAK++ L + LV+L G ++
Sbjct: 39 VVKYGKWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFII 97
Query: 99 YEFMPNKSL------------DSSFSGTFKDLLCLHKY-SRLRVIHRDLKASNILLDDQL 145
E+M N L KD+ +Y + +HRDL A N L++DQ
Sbjct: 98 TEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQG 157
Query: 146 NTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKI 203
K+SDFG++R +E ++ + E M S K+D++ FGVL+ +I
Sbjct: 158 VVKVSDFGLSRYVLDDEYTSSVGSKFPV-RWSPPEVLMYSKFSSKSDIWAFGVLMWEI 214
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 80/178 (44%), Gaps = 15/178 (8%)
Query: 39 VILVGKFPNEQEVAIKRLAWTSGQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLV 98
V+ GK+ + +VAIK + EF EAK++ L + LV+L G ++
Sbjct: 30 VVKYGKWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFII 88
Query: 99 YEFMPNKSL------------DSSFSGTFKDLLCLHKY-SRLRVIHRDLKASNILLDDQL 145
E+M N L KD+ +Y + +HRDL A N L++DQ
Sbjct: 89 TEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQG 148
Query: 146 NTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKI 203
K+SDFG++R +E ++ + E M S K+D++ FGVL+ +I
Sbjct: 149 VVKVSDFGLSRYVLDDEYTSSVGSKFPV-RWSPPEVLMYSKFSSKSDIWAFGVLMWEI 205
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 85/170 (50%), Gaps = 17/170 (10%)
Query: 52 AIKRLAWTSGQGRV-EFQNEAKLIAKLQYTNLVKLLGCSIHGE-ERLLVYEFMPNKSL-- 107
A+K L + G V +F E ++ + N++ LLG + E L+V +M + L
Sbjct: 59 AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 118
Query: 108 ---DSSFSGTFKDLLCL-------HKY-SRLRVIHRDLKASNILLDDQLNTKISDFGMAR 156
+ + + T KDL+ KY + + +HRDL A N +LD++ K++DFG+AR
Sbjct: 119 FIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 178
Query: 157 IFGVNESGANTNRIVG--TYGYMSLEYTMSGTVSIKTDVFGFGVLVLKIV 204
E + N+ +M+LE + + K+DV+ FGVL+ +++
Sbjct: 179 DMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELM 228
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 77/183 (42%), Gaps = 27/183 (14%)
Query: 48 EQEVAIKRL-AWTSGQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKS 106
E VAIK + S + R+EF NEA ++ + ++V+LLG G+ L++ E M
Sbjct: 55 ETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGD 114
Query: 107 LDS------------------------SFSGTFKDLLCLHKYSRLRVIHRDLKASNILLD 142
L S +G D + ++ +HRDL A N ++
Sbjct: 115 LKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKF--VHRDLAARNCMVA 172
Query: 143 DQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLK 202
+ KI DFGM R + + + +MS E G + +DV+ FGV++ +
Sbjct: 173 EDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWE 232
Query: 203 IVC 205
I
Sbjct: 233 IAT 235
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 77/183 (42%), Gaps = 27/183 (14%)
Query: 48 EQEVAIKRL-AWTSGQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKS 106
E VAIK + S + R+EF NEA ++ + ++V+LLG G+ L++ E M
Sbjct: 46 ETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGD 105
Query: 107 LDS------------------------SFSGTFKDLLCLHKYSRLRVIHRDLKASNILLD 142
L S +G D + ++ +HRDL A N ++
Sbjct: 106 LKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKF--VHRDLAARNCMVA 163
Query: 143 DQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLK 202
+ KI DFGM R + + + +MS E G + +DV+ FGV++ +
Sbjct: 164 EDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWE 223
Query: 203 IVC 205
I
Sbjct: 224 IAT 226
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 85/170 (50%), Gaps = 17/170 (10%)
Query: 52 AIKRLAWTSGQGRV-EFQNEAKLIAKLQYTNLVKLLGCSIHGE-ERLLVYEFMPNKSL-- 107
A+K L + G V +F E ++ + N++ LLG + E L+V +M + L
Sbjct: 54 AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 113
Query: 108 ---DSSFSGTFKDLLCL-------HKY-SRLRVIHRDLKASNILLDDQLNTKISDFGMAR 156
+ + + T KDL+ KY + + +HRDL A N +LD++ K++DFG+AR
Sbjct: 114 FIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 173
Query: 157 IFGVNESGANTNRIVG--TYGYMSLEYTMSGTVSIKTDVFGFGVLVLKIV 204
E + N+ +M+LE + + K+DV+ FGVL+ +++
Sbjct: 174 DMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELM 223
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 85/170 (50%), Gaps = 17/170 (10%)
Query: 52 AIKRLAWTSGQGRV-EFQNEAKLIAKLQYTNLVKLLGCSIHGE-ERLLVYEFMPNKSL-- 107
A+K L + G V +F E ++ + N++ LLG + E L+V +M + L
Sbjct: 80 AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 139
Query: 108 ---DSSFSGTFKDLLCL-------HKY-SRLRVIHRDLKASNILLDDQLNTKISDFGMAR 156
+ + + T KDL+ KY + + +HRDL A N +LD++ K++DFG+AR
Sbjct: 140 FIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 199
Query: 157 IFGVNESGANTNRIVG--TYGYMSLEYTMSGTVSIKTDVFGFGVLVLKIV 204
E + N+ +M+LE + + K+DV+ FGVL+ +++
Sbjct: 200 DMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELM 249
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 77/183 (42%), Gaps = 27/183 (14%)
Query: 48 EQEVAIKRL-AWTSGQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKS 106
E VAIK + S + R+EF NEA ++ + ++V+LLG G+ L++ E M
Sbjct: 45 ETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGD 104
Query: 107 LDS------------------------SFSGTFKDLLCLHKYSRLRVIHRDLKASNILLD 142
L S +G D + ++ +HRDL A N ++
Sbjct: 105 LKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKF--VHRDLAARNCMVA 162
Query: 143 DQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLK 202
+ KI DFGM R + + + +MS E G + +DV+ FGV++ +
Sbjct: 163 EDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWE 222
Query: 203 IVC 205
I
Sbjct: 223 IAT 225
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 78/181 (43%), Gaps = 23/181 (12%)
Query: 48 EQEVAIKRL-AWTSGQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKS 106
E VAIK + S + R+EF NEA ++ + ++V+LLG G+ L++ E M
Sbjct: 48 ETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGD 107
Query: 107 LDSSFSGTFKDL-----LCLHKYSRL-----------------RVIHRDLKASNILLDDQ 144
L S ++ L S++ + +HRDL A N ++ +
Sbjct: 108 LKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAED 167
Query: 145 LNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKIV 204
KI DFGM R + + + +MS E G + +DV+ FGV++ +I
Sbjct: 168 FTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIA 227
Query: 205 C 205
Sbjct: 228 T 228
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 77/183 (42%), Gaps = 27/183 (14%)
Query: 48 EQEVAIKRL-AWTSGQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKS 106
E VAIK + S + R+EF NEA ++ + ++V+LLG G+ L++ E M
Sbjct: 42 ETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGD 101
Query: 107 LDS------------------------SFSGTFKDLLCLHKYSRLRVIHRDLKASNILLD 142
L S +G D + ++ +HRDL A N ++
Sbjct: 102 LKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKF--VHRDLAARNCMVA 159
Query: 143 DQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLK 202
+ KI DFGM R + + + +MS E G + +DV+ FGV++ +
Sbjct: 160 EDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWE 219
Query: 203 IVC 205
I
Sbjct: 220 IAT 222
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 85/170 (50%), Gaps = 17/170 (10%)
Query: 52 AIKRLAWTSGQGRV-EFQNEAKLIAKLQYTNLVKLLGCSIHGE-ERLLVYEFMPNKSL-- 107
A+K L + G V +F E ++ + N++ LLG + E L+V +M + L
Sbjct: 60 AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 119
Query: 108 ---DSSFSGTFKDLLCL-------HKY-SRLRVIHRDLKASNILLDDQLNTKISDFGMAR 156
+ + + T KDL+ KY + + +HRDL A N +LD++ K++DFG+AR
Sbjct: 120 FIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 179
Query: 157 IFGVNESGANTNRIVG--TYGYMSLEYTMSGTVSIKTDVFGFGVLVLKIV 204
E + N+ +M+LE + + K+DV+ FGVL+ +++
Sbjct: 180 DMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELM 229
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 78/181 (43%), Gaps = 23/181 (12%)
Query: 48 EQEVAIKRL-AWTSGQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKS 106
E VAIK + S + R+EF NEA ++ + ++V+LLG G+ L++ E M
Sbjct: 48 ETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGD 107
Query: 107 LDSSFSGTFKDL-----LCLHKYSRL-----------------RVIHRDLKASNILLDDQ 144
L S ++ L S++ + +HRDL A N ++ +
Sbjct: 108 LKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAED 167
Query: 145 LNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKIV 204
KI DFGM R + + + +MS E G + +DV+ FGV++ +I
Sbjct: 168 FTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIA 227
Query: 205 C 205
Sbjct: 228 T 228
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 77/183 (42%), Gaps = 27/183 (14%)
Query: 48 EQEVAIKRL-AWTSGQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKS 106
E VAIK + S + R+EF NEA ++ + ++V+LLG G+ L++ E M
Sbjct: 49 ETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGD 108
Query: 107 LDS------------------------SFSGTFKDLLCLHKYSRLRVIHRDLKASNILLD 142
L S +G D + ++ +HRDL A N ++
Sbjct: 109 LKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKF--VHRDLAARNCMVA 166
Query: 143 DQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLK 202
+ KI DFGM R + + + +MS E G + +DV+ FGV++ +
Sbjct: 167 EDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWE 226
Query: 203 IVC 205
I
Sbjct: 227 IAT 229
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 84/182 (46%), Gaps = 16/182 (8%)
Query: 49 QEVAIKRLAWTSGQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSLD 108
QEVAI+++ + NE ++ + + N+V L + G+E +V E++ SL
Sbjct: 46 QEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLT 105
Query: 109 SSFSGTFKD--------LLCLHKYSRL---RVIHRDLKASNILLDDQLNTKISDFGMARI 157
+ T D CL L +VIHRD+K+ NILL + K++DFG
Sbjct: 106 DVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQ 165
Query: 158 FGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKIVCGKKNNKSYHTER 217
+S + +VGT +M+ E K D++ G++ ++++ G+ Y E
Sbjct: 166 ITPEQS--KRSEMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGE---PPYLNEN 220
Query: 218 PL 219
PL
Sbjct: 221 PL 222
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 90/189 (47%), Gaps = 36/189 (19%)
Query: 51 VAIKRLAWTSGQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEER---LLVYEFMPNKSL 107
VA+K+L + + +FQ E +++ L +VK G S +G R LV E++P
Sbjct: 39 VAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVS-YGPGRPELRLVMEYLP---- 93
Query: 108 DSSFSGTFKDLLCLHKY----SRL-----------------RVIHRDLKASNILLDDQLN 146
SG +D L H+ SRL R +HRDL A NIL++ + +
Sbjct: 94 ----SGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAH 149
Query: 147 TKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTV-SIKTDVFGFGVLVLKIV- 204
KI+DFG+A++ +++ + + ++S + S ++DV+ FGV++ ++
Sbjct: 150 VKIADFGLAKLLPLDKDXXVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 209
Query: 205 -CGKKNNKS 212
C K + S
Sbjct: 210 YCDKSCSPS 218
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 93/208 (44%), Gaps = 17/208 (8%)
Query: 49 QEVAIKRLAWTSGQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSLD 108
++VA+K++ Q R NE ++ + N+V + + G+E +V EF+ +L
Sbjct: 71 KQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSYLVGDELWVVMEFLEGGALT 130
Query: 109 SSFSGTFKD--------LLCLHKYSRLR---VIHRDLKASNILLDDQLNTKISDFGMARI 157
+ T + L L S L VIHRD+K+ +ILL K+SDFG
Sbjct: 131 DIVTHTRMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILLTSDGRIKLSDFGFCA- 189
Query: 158 FGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKIVCGKKNNKSYHTER 217
V++ +VGT +M+ E + D++ G++V++++ G+ Y E
Sbjct: 190 -QVSKEVPKRKXLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGE---PPYFNEP 245
Query: 218 PLN-LVGIAWQLWNEGKDLELIDLTLDG 244
PL + I L KDL + L G
Sbjct: 246 PLQAMRRIRDSLPPRVKDLHKVSSVLRG 273
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 77/183 (42%), Gaps = 27/183 (14%)
Query: 48 EQEVAIKRL-AWTSGQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKS 106
E VAIK + S + R+EF NEA ++ + ++V+LLG G+ L++ E M
Sbjct: 77 ETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGD 136
Query: 107 LDS------------------------SFSGTFKDLLCLHKYSRLRVIHRDLKASNILLD 142
L S +G D + ++ +HRDL A N ++
Sbjct: 137 LKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKF--VHRDLAARNCMVA 194
Query: 143 DQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLK 202
+ KI DFGM R + + + +MS E G + +DV+ FGV++ +
Sbjct: 195 EDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWE 254
Query: 203 IVC 205
I
Sbjct: 255 IAT 257
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 89/188 (47%), Gaps = 28/188 (14%)
Query: 51 VAIKRLAWTSGQGRVEFQNEAKLIAKLQYTNLVKLLG-CSIHGEERL-LVYEFMPNKSLD 108
VA+K+L ++ + +F+ E +++ LQ+ N+VK G C G L L+ E++P SL
Sbjct: 40 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 99
Query: 109 SSFSGTFK--DLLCLHKYSRL-----------RVIHRDLKASNILLDDQLNTKISDFGMA 155
+ D + L +Y+ R IHRDL NIL++++ KI DFG+
Sbjct: 100 DYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 159
Query: 156 RIF-------GVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKIVCGKK 208
++ V E G + + Y T S S+ +DV+ FGV++ ++ +
Sbjct: 160 KVLPQDKEXXKVKEPGESP-----IFWYAPESLTES-KFSVASDVWSFGVVLYELFTYIE 213
Query: 209 NNKSYHTE 216
+KS E
Sbjct: 214 KSKSPPAE 221
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 89/188 (47%), Gaps = 28/188 (14%)
Query: 51 VAIKRLAWTSGQGRVEFQNEAKLIAKLQYTNLVKLLG-CSIHGEERL-LVYEFMPNKSLD 108
VA+K+L ++ + +F+ E +++ LQ+ N+VK G C G L L+ E++P SL
Sbjct: 46 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 105
Query: 109 SSFSGTFK--DLLCLHKYSRL-----------RVIHRDLKASNILLDDQLNTKISDFGMA 155
+ D + L +Y+ R IHRDL NIL++++ KI DFG+
Sbjct: 106 DYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 165
Query: 156 RIF-------GVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKIVCGKK 208
++ V E G + + Y T S S+ +DV+ FGV++ ++ +
Sbjct: 166 KVLPQDKEXXKVKEPGESP-----IFWYAPESLTES-KFSVASDVWSFGVVLYELFTYIE 219
Query: 209 NNKSYHTE 216
+KS E
Sbjct: 220 KSKSPPAE 227
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 89/188 (47%), Gaps = 28/188 (14%)
Query: 51 VAIKRLAWTSGQGRVEFQNEAKLIAKLQYTNLVKLLG-CSIHGEERL-LVYEFMPNKSLD 108
VA+K+L ++ + +F+ E +++ LQ+ N+VK G C G L L+ E++P SL
Sbjct: 41 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 100
Query: 109 SSFSGTFK--DLLCLHKYSRL-----------RVIHRDLKASNILLDDQLNTKISDFGMA 155
+ D + L +Y+ R IHRDL NIL++++ KI DFG+
Sbjct: 101 DYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 160
Query: 156 RIF-------GVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKIVCGKK 208
++ V E G + + Y SL S+ +DV+ FGV++ ++ +
Sbjct: 161 KVLPQDKEXXKVKEPGESP---IFWYAPESL---TESKFSVASDVWSFGVVLYELFTYIE 214
Query: 209 NNKSYHTE 216
+KS E
Sbjct: 215 KSKSPPAE 222
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 84/182 (46%), Gaps = 16/182 (8%)
Query: 49 QEVAIKRLAWTSGQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSLD 108
QEVAI+++ + NE ++ + + N+V L + G+E +V E++ SL
Sbjct: 46 QEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLT 105
Query: 109 SSFSGTFKD--------LLCLHKYSRL---RVIHRDLKASNILLDDQLNTKISDFGMARI 157
+ T D CL L +VIHRD+K+ NILL + K++DFG
Sbjct: 106 DVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQ 165
Query: 158 FGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKIVCGKKNNKSYHTER 217
+S + +VGT +M+ E K D++ G++ ++++ G+ Y E
Sbjct: 166 ITPEQS--KRSXMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGE---PPYLNEN 220
Query: 218 PL 219
PL
Sbjct: 221 PL 222
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 84/170 (49%), Gaps = 17/170 (10%)
Query: 52 AIKRLAWTSGQGRV-EFQNEAKLIAKLQYTNLVKLLGCSIHGE-ERLLVYEFMPNKSL-- 107
A+K L + G V +F E ++ + N++ LLG + E L+V +M + L
Sbjct: 62 AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 121
Query: 108 ---DSSFSGTFKDLLC--------LHKYSRLRVIHRDLKASNILLDDQLNTKISDFGMAR 156
+ + + T KDL+ + + + +HRDL A N +LD++ K++DFG+AR
Sbjct: 122 FIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 181
Query: 157 IFGVNESGANTNRIVG--TYGYMSLEYTMSGTVSIKTDVFGFGVLVLKIV 204
E + N+ +M+LE + + K+DV+ FGVL+ +++
Sbjct: 182 DMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELM 231
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 84/170 (49%), Gaps = 17/170 (10%)
Query: 52 AIKRLAWTSGQGRV-EFQNEAKLIAKLQYTNLVKLLGCSIHGE-ERLLVYEFMPNKSL-- 107
A+K L + G V +F E ++ + N++ LLG + E L+V +M + L
Sbjct: 60 AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 119
Query: 108 ---DSSFSGTFKDLLC--------LHKYSRLRVIHRDLKASNILLDDQLNTKISDFGMAR 156
+ + + T KDL+ + + + +HRDL A N +LD++ K++DFG+AR
Sbjct: 120 FIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 179
Query: 157 IFGVNESGANTNRIVG--TYGYMSLEYTMSGTVSIKTDVFGFGVLVLKIV 204
E + N+ +M+LE + + K+DV+ FGVL+ +++
Sbjct: 180 DMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELM 229
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 84/182 (46%), Gaps = 16/182 (8%)
Query: 49 QEVAIKRLAWTSGQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSLD 108
QEVAI+++ + NE ++ + + N+V L + G+E +V E++ SL
Sbjct: 47 QEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLT 106
Query: 109 SSFSGTFKD--------LLCLHKYSRL---RVIHRDLKASNILLDDQLNTKISDFGMARI 157
+ T D CL L +VIHRD+K+ NILL + K++DFG
Sbjct: 107 DVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQ 166
Query: 158 FGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKIVCGKKNNKSYHTER 217
+S + +VGT +M+ E K D++ G++ ++++ G+ Y E
Sbjct: 167 ITPEQS--KRSXMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGE---PPYLNEN 221
Query: 218 PL 219
PL
Sbjct: 222 PL 223
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 89/188 (47%), Gaps = 28/188 (14%)
Query: 51 VAIKRLAWTSGQGRVEFQNEAKLIAKLQYTNLVKLLG-CSIHGEERL-LVYEFMPNKSLD 108
VA+K+L ++ + +F+ E +++ LQ+ N+VK G C G L L+ E++P SL
Sbjct: 42 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 101
Query: 109 SSFSGTFK--DLLCLHKYSRL-----------RVIHRDLKASNILLDDQLNTKISDFGMA 155
+ D + L +Y+ R IHRDL NIL++++ KI DFG+
Sbjct: 102 DYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 161
Query: 156 RIF-------GVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKIVCGKK 208
++ V E G + + Y T S S+ +DV+ FGV++ ++ +
Sbjct: 162 KVLPQDKEXXKVKEPGESP-----IFWYAPESLTES-KFSVASDVWSFGVVLYELFTYIE 215
Query: 209 NNKSYHTE 216
+KS E
Sbjct: 216 KSKSPPAE 223
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 84/170 (49%), Gaps = 17/170 (10%)
Query: 52 AIKRLAWTSGQGRV-EFQNEAKLIAKLQYTNLVKLLGCSIHGE-ERLLVYEFMPNKSL-- 107
A+K L + G V +F E ++ + N++ LLG + E L+V +M + L
Sbjct: 62 AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 121
Query: 108 ---DSSFSGTFKDLLC--------LHKYSRLRVIHRDLKASNILLDDQLNTKISDFGMAR 156
+ + + T KDL+ + + + +HRDL A N +LD++ K++DFG+AR
Sbjct: 122 FIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 181
Query: 157 IFGVNESGANTNRIVG--TYGYMSLEYTMSGTVSIKTDVFGFGVLVLKIV 204
E + N+ +M+LE + + K+DV+ FGVL+ +++
Sbjct: 182 DMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELM 231
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 83/167 (49%), Gaps = 19/167 (11%)
Query: 54 KRLAWTSGQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSLD----- 108
K LA + QGR+E E + L++ +++KL +E ++V E+ N+ D
Sbjct: 40 KVLAKSDMQGRIE--REISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQR 97
Query: 109 -----SSFSGTFKDLLCLHKY-SRLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNE 162
F+ ++ +Y R +++HRDLK N+LLD+ LN KI+DFG++ I
Sbjct: 98 DKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIM---T 154
Query: 163 SGANTNRIVGTYGYMSLEYTMSGTVSI--KTDVFGFGVLVLKIVCGK 207
G G+ Y + E +SG + + DV+ GV++ ++C +
Sbjct: 155 DGNFLKTSCGSPNYAAPE-VISGKLYAGPEVDVWSCGVILYVMLCRR 200
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 89/188 (47%), Gaps = 28/188 (14%)
Query: 51 VAIKRLAWTSGQGRVEFQNEAKLIAKLQYTNLVKLLG-CSIHGEERL-LVYEFMPNKSLD 108
VA+K+L ++ + +F+ E +++ LQ+ N+VK G C G L L+ E++P SL
Sbjct: 45 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 104
Query: 109 SSFSGTFK--DLLCLHKYSRL-----------RVIHRDLKASNILLDDQLNTKISDFGMA 155
+ D + L +Y+ R IHRDL NIL++++ KI DFG+
Sbjct: 105 DYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 164
Query: 156 RIF-------GVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKIVCGKK 208
++ V E G + + Y T S S+ +DV+ FGV++ ++ +
Sbjct: 165 KVLPQDKEXXKVKEPGESP-----IFWYAPESLTES-KFSVASDVWSFGVVLYELFTYIE 218
Query: 209 NNKSYHTE 216
+KS E
Sbjct: 219 KSKSPPAE 226
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 84/170 (49%), Gaps = 17/170 (10%)
Query: 52 AIKRLAWTSGQGRV-EFQNEAKLIAKLQYTNLVKLLGCSIHGE-ERLLVYEFMPNKSL-- 107
A+K L + G V +F E ++ + N++ LLG + E L+V +M + L
Sbjct: 67 AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 126
Query: 108 ---DSSFSGTFKDLLC--------LHKYSRLRVIHRDLKASNILLDDQLNTKISDFGMAR 156
+ + + T KDL+ + + + +HRDL A N +LD++ K++DFG+AR
Sbjct: 127 FIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 186
Query: 157 IFGVNESGANTNRIVG--TYGYMSLEYTMSGTVSIKTDVFGFGVLVLKIV 204
E + N+ +M+LE + + K+DV+ FGVL+ +++
Sbjct: 187 DMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELM 236
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 89/188 (47%), Gaps = 28/188 (14%)
Query: 51 VAIKRLAWTSGQGRVEFQNEAKLIAKLQYTNLVKLLG-CSIHGEERL-LVYEFMPNKSLD 108
VA+K+L ++ + +F+ E +++ LQ+ N+VK G C G L L+ E++P SL
Sbjct: 42 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 101
Query: 109 SSFSGTFK--DLLCLHKYSRL-----------RVIHRDLKASNILLDDQLNTKISDFGMA 155
+ D + L +Y+ R IHRDL NIL++++ KI DFG+
Sbjct: 102 DYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 161
Query: 156 RIF-------GVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKIVCGKK 208
++ V E G + + Y T S S+ +DV+ FGV++ ++ +
Sbjct: 162 KVLPQDKEXXKVKEPGESP-----IFWYAPESLTES-KFSVASDVWSFGVVLYELFTYIE 215
Query: 209 NNKSYHTE 216
+KS E
Sbjct: 216 KSKSPPAE 223
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 84/170 (49%), Gaps = 17/170 (10%)
Query: 52 AIKRLAWTSGQGRV-EFQNEAKLIAKLQYTNLVKLLGCSIHGE-ERLLVYEFMPNKSL-- 107
A+K L + G V +F E ++ + N++ LLG + E L+V +M + L
Sbjct: 63 AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 122
Query: 108 ---DSSFSGTFKDLLC--------LHKYSRLRVIHRDLKASNILLDDQLNTKISDFGMAR 156
+ + + T KDL+ + + + +HRDL A N +LD++ K++DFG+AR
Sbjct: 123 FIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 182
Query: 157 IFGVNESGANTNRIVG--TYGYMSLEYTMSGTVSIKTDVFGFGVLVLKIV 204
E + N+ +M+LE + + K+DV+ FGVL+ +++
Sbjct: 183 DMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELM 232
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 89/188 (47%), Gaps = 28/188 (14%)
Query: 51 VAIKRLAWTSGQGRVEFQNEAKLIAKLQYTNLVKLLG-CSIHGEERL-LVYEFMPNKSLD 108
VA+K+L ++ + +F+ E +++ LQ+ N+VK G C G L L+ E++P SL
Sbjct: 48 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 107
Query: 109 SSFSGTFK--DLLCLHKYSRL-----------RVIHRDLKASNILLDDQLNTKISDFGMA 155
+ D + L +Y+ R IHRDL NIL++++ KI DFG+
Sbjct: 108 DYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 167
Query: 156 RIF-------GVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKIVCGKK 208
++ V E G + + Y T S S+ +DV+ FGV++ ++ +
Sbjct: 168 KVLPQDKEXXKVKEPGESP-----IFWYAPESLTES-KFSVASDVWSFGVVLYELFTYIE 221
Query: 209 NNKSYHTE 216
+KS E
Sbjct: 222 KSKSPPAE 229
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 82/191 (42%), Gaps = 39/191 (20%)
Query: 51 VAIKRL-AWTSGQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSLDS 109
VA+K L S + +FQ EA L+A+ N+VKLLG G+ L++E+M L+
Sbjct: 80 VAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNE 139
Query: 110 SFSGTFKDLLCLHKYS----RLRV--------------------------------IHRD 133
+C +S R RV +HRD
Sbjct: 140 FLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRD 199
Query: 134 LKASNILLDDQLNTKISDFGMAR-IFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTD 192
L N L+ + + KI+DFG++R I+ + A+ N + +M E + ++D
Sbjct: 200 LATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPI-RWMPPESIFYNRYTTESD 258
Query: 193 VFGFGVLVLKI 203
V+ +GV++ +I
Sbjct: 259 VWAYGVVLWEI 269
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 89/188 (47%), Gaps = 28/188 (14%)
Query: 51 VAIKRLAWTSGQGRVEFQNEAKLIAKLQYTNLVKLLG-CSIHGEERL-LVYEFMPNKSLD 108
VA+K+L ++ + +F+ E +++ LQ+ N+VK G C G L L+ E++P SL
Sbjct: 47 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 106
Query: 109 SSFSGTFK--DLLCLHKYSRL-----------RVIHRDLKASNILLDDQLNTKISDFGMA 155
+ D + L +Y+ R IHRDL NIL++++ KI DFG+
Sbjct: 107 DYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 166
Query: 156 RIF-------GVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKIVCGKK 208
++ V E G + + Y T S S+ +DV+ FGV++ ++ +
Sbjct: 167 KVLPQDKEXXKVKEPGESP-----IFWYAPESLTES-KFSVASDVWSFGVVLYELFTYIE 220
Query: 209 NNKSYHTE 216
+KS E
Sbjct: 221 KSKSPPAE 228
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 84/170 (49%), Gaps = 17/170 (10%)
Query: 52 AIKRLAWTSGQGRV-EFQNEAKLIAKLQYTNLVKLLGCSIHGE-ERLLVYEFMPNKSL-- 107
A+K L + G V +F E ++ + N++ LLG + E L+V +M + L
Sbjct: 121 AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 180
Query: 108 ---DSSFSGTFKDLLC--------LHKYSRLRVIHRDLKASNILLDDQLNTKISDFGMAR 156
+ + + T KDL+ + + + +HRDL A N +LD++ K++DFG+AR
Sbjct: 181 FIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 240
Query: 157 IFGVNESGANTNRIVG--TYGYMSLEYTMSGTVSIKTDVFGFGVLVLKIV 204
E + N+ +M+LE + + K+DV+ FGVL+ +++
Sbjct: 241 DMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELM 290
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 90/188 (47%), Gaps = 34/188 (18%)
Query: 51 VAIKRLAWTSGQGRVEFQNEAKLIAKLQYTNLVKLLGCSI-HGEERL-LVYEFMPNKSLD 108
VA+K+L + + +FQ E +++ L +VK G S G + L LV E++P
Sbjct: 42 VAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLP----- 96
Query: 109 SSFSGTFKDLLCLHKY----SRL-----------------RVIHRDLKASNILLDDQLNT 147
SG +D L H+ SRL R +HRDL A NIL++ + +
Sbjct: 97 ---SGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHV 153
Query: 148 KISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTV-SIKTDVFGFGVLVLKIV-- 204
KI+DFG+A++ +++ + + ++S + S ++DV+ FGV++ ++
Sbjct: 154 KIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTY 213
Query: 205 CGKKNNKS 212
C K + S
Sbjct: 214 CDKSCSPS 221
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 89/188 (47%), Gaps = 28/188 (14%)
Query: 51 VAIKRLAWTSGQGRVEFQNEAKLIAKLQYTNLVKLLG-CSIHGEERL-LVYEFMPNKSLD 108
VA+K+L ++ + +F+ E +++ LQ+ N+VK G C G L L+ E++P SL
Sbjct: 73 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 132
Query: 109 SSFSGTFK--DLLCLHKYSRL-----------RVIHRDLKASNILLDDQLNTKISDFGMA 155
+ D + L +Y+ R IHRDL NIL++++ KI DFG+
Sbjct: 133 DYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 192
Query: 156 RIF-------GVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKIVCGKK 208
++ V E G + + Y T S S+ +DV+ FGV++ ++ +
Sbjct: 193 KVLPQDKEXXKVKEPGESP-----IFWYAPESLTES-KFSVASDVWSFGVVLYELFTYIE 246
Query: 209 NNKSYHTE 216
+KS E
Sbjct: 247 KSKSPPAE 254
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 67/149 (44%), Gaps = 19/149 (12%)
Query: 75 AKLQYTNLVKLLGCSIHGEERLLVYEF---------------MPNKSLDSSFSGTFKDLL 119
A L + N+VK G G + L E+ MP F ++
Sbjct: 60 AMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV 119
Query: 120 CLHKYSRLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSL 179
LH + + HRD+K N+LLD++ N KISDFG+A +F N N++ GT Y++
Sbjct: 120 YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 176
Query: 180 EYTMSGTVSIK-TDVFGFGVLVLKIVCGK 207
E + DV+ G+++ ++ G+
Sbjct: 177 ELLKRREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 90/188 (47%), Gaps = 34/188 (18%)
Query: 51 VAIKRLAWTSGQGRVEFQNEAKLIAKLQYTNLVKLLGCSI-HGEERL-LVYEFMPNKSLD 108
VA+K+L + + +FQ E +++ L +VK G S G + L LV E++P
Sbjct: 43 VAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLP----- 97
Query: 109 SSFSGTFKDLLCLHKY----SRL-----------------RVIHRDLKASNILLDDQLNT 147
SG +D L H+ SRL R +HRDL A NIL++ + +
Sbjct: 98 ---SGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHV 154
Query: 148 KISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTV-SIKTDVFGFGVLVLKIV-- 204
KI+DFG+A++ +++ + + ++S + S ++DV+ FGV++ ++
Sbjct: 155 KIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTY 214
Query: 205 CGKKNNKS 212
C K + S
Sbjct: 215 CDKSCSPS 222
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 77/181 (42%), Gaps = 23/181 (12%)
Query: 48 EQEVAIKRL-AWTSGQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKS 106
E VAIK + S + R+EF NEA ++ + ++V+LLG G+ L++ E M
Sbjct: 42 ETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGD 101
Query: 107 LDSSFSGTFKDL-----LCLHKYSRL-----------------RVIHRDLKASNILLDDQ 144
L S ++ L S++ + +HRDL A N + +
Sbjct: 102 LKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCXVAED 161
Query: 145 LNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKIV 204
KI DFGM R + + + +MS E G + +DV+ FGV++ +I
Sbjct: 162 FTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIA 221
Query: 205 C 205
Sbjct: 222 T 222
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 84/170 (49%), Gaps = 17/170 (10%)
Query: 52 AIKRLAWTSGQGRV-EFQNEAKLIAKLQYTNLVKLLGCSIHGE-ERLLVYEFMPNKSL-- 107
A+K L + G V +F E ++ + N++ LLG + E L+V +M + L
Sbjct: 63 AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 122
Query: 108 ---DSSFSGTFKDLLC--------LHKYSRLRVIHRDLKASNILLDDQLNTKISDFGMAR 156
+ + + T KDL+ + + + +HRDL A N +LD++ K++DFG+AR
Sbjct: 123 FIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 182
Query: 157 IFGVNESGANTNRIVG--TYGYMSLEYTMSGTVSIKTDVFGFGVLVLKIV 204
E + N+ +M+LE + + K+DV+ FGVL+ +++
Sbjct: 183 DMLDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELM 232
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 82/165 (49%), Gaps = 19/165 (11%)
Query: 54 KRLAWTSGQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSLD----- 108
K LA + QGR+E E + L++ +++KL +E ++V E+ N+ D
Sbjct: 44 KVLAKSDMQGRIE--REISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQR 101
Query: 109 -----SSFSGTFKDLLCLHKY-SRLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNE 162
F+ ++ +Y R +++HRDLK N+LLD+ LN KI+DFG++ I
Sbjct: 102 DKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIM---T 158
Query: 163 SGANTNRIVGTYGYMSLEYTMSGTVSI--KTDVFGFGVLVLKIVC 205
G G+ Y + E +SG + + DV+ GV++ ++C
Sbjct: 159 DGNFLKTSCGSPNYAAPE-VISGKLYAGPEVDVWSCGVILYVMLC 202
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 85/182 (46%), Gaps = 16/182 (8%)
Query: 49 QEVAIKRLAWTSGQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSLD 108
QEVAI+++ + NE ++ + + N+V L + G+E +V E++ SL
Sbjct: 47 QEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLT 106
Query: 109 SSFSGTFKD--------LLCLHKYSRL---RVIHRDLKASNILLDDQLNTKISDFGMARI 157
+ T D CL L +VIHR++K+ NILL + K++DFG
Sbjct: 107 DVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRNIKSDNILLGMDGSVKLTDFGFCAQ 166
Query: 158 FGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKIVCGKKNNKSYHTER 217
+S +T +VGT +M+ E K D++ G++ ++++ G+ Y E
Sbjct: 167 ITPEQSKRST--MVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGE---PPYLNEN 221
Query: 218 PL 219
PL
Sbjct: 222 PL 223
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 85/186 (45%), Gaps = 22/186 (11%)
Query: 49 QEVAIKRLAWTSGQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSLD 108
++VA+K + Q R NE ++ Q+ N+V++ + GEE ++ EF+ +L
Sbjct: 71 RQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQGGALT 130
Query: 109 SSFS--------------GTFKDLLCLHKYSRLRVIHRDLKASNILLDDQLNTKISDFGM 154
S + L LH VIHRD+K+ +ILL K+SDFG
Sbjct: 131 DIVSQVRLNEEQIATVCEAVLQALAYLHAQG---VIHRDIKSDSILLTLDGRVKLSDFGF 187
Query: 155 ARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKIVCGKKNNKSYH 214
+++ +VGT +M+ E + + D++ G++V+++V G+ Y
Sbjct: 188 CA--QISKDVPKRKXLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGE---PPYF 242
Query: 215 TERPLN 220
++ P+
Sbjct: 243 SDSPVQ 248
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 89/188 (47%), Gaps = 28/188 (14%)
Query: 51 VAIKRLAWTSGQGRVEFQNEAKLIAKLQYTNLVKLLG-CSIHGEERL-LVYEFMPNKSLD 108
VA+K+L ++ + +F+ E +++ LQ+ N+VK G C G L L+ E++P SL
Sbjct: 49 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 108
Query: 109 SSFSGTFK--DLLCLHKYSRL-----------RVIHRDLKASNILLDDQLNTKISDFGMA 155
+ D + L +Y+ R IHRDL NIL++++ KI DFG+
Sbjct: 109 DYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 168
Query: 156 RIF-------GVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKIVCGKK 208
++ V E G + + Y T S S+ +DV+ FGV++ ++ +
Sbjct: 169 KVLPQDKEXXKVKEPGESP-----IFWYAPESLTES-KFSVASDVWSFGVVLYELFTYIE 222
Query: 209 NNKSYHTE 216
+KS E
Sbjct: 223 KSKSPPAE 230
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 89/188 (47%), Gaps = 28/188 (14%)
Query: 51 VAIKRLAWTSGQGRVEFQNEAKLIAKLQYTNLVKLLG-CSIHGEERL-LVYEFMPNKSLD 108
VA+K+L ++ + +F+ E +++ LQ+ N+VK G C G L L+ E++P SL
Sbjct: 60 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 119
Query: 109 SSFSGTFK--DLLCLHKYSRL-----------RVIHRDLKASNILLDDQLNTKISDFGMA 155
+ D + L +Y+ R IHRDL NIL++++ KI DFG+
Sbjct: 120 DYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 179
Query: 156 RIF-------GVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKIVCGKK 208
++ V E G + + Y T S S+ +DV+ FGV++ ++ +
Sbjct: 180 KVLPQDKEXXKVKEPGESP-----IFWYAPESLTES-KFSVASDVWSFGVVLYELFTYIE 233
Query: 209 NNKSYHTE 216
+KS E
Sbjct: 234 KSKSPPAE 241
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 82/165 (49%), Gaps = 19/165 (11%)
Query: 54 KRLAWTSGQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSLD----- 108
K LA + QGR+E E + L++ +++KL +E ++V E+ N+ D
Sbjct: 49 KVLAKSDMQGRIE--REISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQR 106
Query: 109 -----SSFSGTFKDLLCLHKY-SRLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNE 162
F+ ++ +Y R +++HRDLK N+LLD+ LN KI+DFG++ I
Sbjct: 107 DKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIM---T 163
Query: 163 SGANTNRIVGTYGYMSLEYTMSGTVSI--KTDVFGFGVLVLKIVC 205
G G+ Y + E +SG + + DV+ GV++ ++C
Sbjct: 164 DGNFLKTSCGSPNYAAPE-VISGKLYAGPEVDVWSCGVILYVMLC 207
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 82/165 (49%), Gaps = 19/165 (11%)
Query: 54 KRLAWTSGQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSLD----- 108
K LA + QGR+E E + L++ +++KL +E ++V E+ N+ D
Sbjct: 50 KVLAKSDMQGRIE--REISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQR 107
Query: 109 -----SSFSGTFKDLLCLHKY-SRLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNE 162
F+ ++ +Y R +++HRDLK N+LLD+ LN KI+DFG++ I
Sbjct: 108 DKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIM---T 164
Query: 163 SGANTNRIVGTYGYMSLEYTMSGTVSI--KTDVFGFGVLVLKIVC 205
G G+ Y + E +SG + + DV+ GV++ ++C
Sbjct: 165 DGNFLKTSCGSPNYAAPE-VISGKLYAGPEVDVWSCGVILYVMLC 208
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 90/188 (47%), Gaps = 34/188 (18%)
Query: 51 VAIKRLAWTSGQGRVEFQNEAKLIAKLQYTNLVKLLGCSI-HGEERL-LVYEFMPNKSLD 108
VA+K+L + + +FQ E +++ L +VK G S G + L LV E++P
Sbjct: 55 VAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLP----- 109
Query: 109 SSFSGTFKDLLCLHKY----SRL-----------------RVIHRDLKASNILLDDQLNT 147
SG +D L H+ SRL R +HRDL A NIL++ + +
Sbjct: 110 ---SGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHV 166
Query: 148 KISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTV-SIKTDVFGFGVLVLKIV-- 204
KI+DFG+A++ +++ + + ++S + S ++DV+ FGV++ ++
Sbjct: 167 KIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTY 226
Query: 205 CGKKNNKS 212
C K + S
Sbjct: 227 CDKSCSPS 234
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 89/188 (47%), Gaps = 28/188 (14%)
Query: 51 VAIKRLAWTSGQGRVEFQNEAKLIAKLQYTNLVKLLG-CSIHGEERL-LVYEFMPNKSLD 108
VA+K+L ++ + +F+ E +++ LQ+ N+VK G C G L L+ E++P SL
Sbjct: 60 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 119
Query: 109 SSFSGTFK--DLLCLHKYSRL-----------RVIHRDLKASNILLDDQLNTKISDFGMA 155
+ D + L +Y+ R IHRDL NIL++++ KI DFG+
Sbjct: 120 DYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 179
Query: 156 RIF-------GVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKIVCGKK 208
++ V E G + + Y T S S+ +DV+ FGV++ ++ +
Sbjct: 180 KVLPQDKEXXKVKEPGESP-----IFWYAPESLTES-KFSVASDVWSFGVVLYELFTYIE 233
Query: 209 NNKSYHTE 216
+KS E
Sbjct: 234 KSKSPPAE 241
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 66/147 (44%), Gaps = 19/147 (12%)
Query: 77 LQYTNLVKLLGCSIHGEERLLVYEF---------------MPNKSLDSSFSGTFKDLLCL 121
L + N+VK G G + L E+ MP F ++ L
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 121
Query: 122 HKYSRLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEY 181
H + + HRD+K N+LLD++ N KISDFG+A +F N N++ GT Y++ E
Sbjct: 122 HG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPEL 178
Query: 182 TMSGTVSIK-TDVFGFGVLVLKIVCGK 207
+ DV+ G+++ ++ G+
Sbjct: 179 LKRREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 66/147 (44%), Gaps = 19/147 (12%)
Query: 77 LQYTNLVKLLGCSIHGEERLLVYEF---------------MPNKSLDSSFSGTFKDLLCL 121
L + N+VK G G + L E+ MP F ++ L
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 120
Query: 122 HKYSRLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEY 181
H + + HRD+K N+LLD++ N KISDFG+A +F N N++ GT Y++ E
Sbjct: 121 HG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPEL 177
Query: 182 TMSGTVSIK-TDVFGFGVLVLKIVCGK 207
+ DV+ G+++ ++ G+
Sbjct: 178 LKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 66/147 (44%), Gaps = 19/147 (12%)
Query: 77 LQYTNLVKLLGCSIHGEERLLVYEF---------------MPNKSLDSSFSGTFKDLLCL 121
L + N+VK G G + L E+ MP F ++ L
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 120
Query: 122 HKYSRLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEY 181
H + + HRD+K N+LLD++ N KISDFG+A +F N N++ GT Y++ E
Sbjct: 121 HG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPEL 177
Query: 182 TMSGTVSIK-TDVFGFGVLVLKIVCGK 207
+ DV+ G+++ ++ G+
Sbjct: 178 LKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 89/184 (48%), Gaps = 28/184 (15%)
Query: 51 VAIKRLAWTSGQGRVEFQNEAKLIAKLQYTNLVKLLG-CSIHGEERL-LVYEFMPNKSLD 108
VA+K+L ++ + +F+ E +++ LQ+ N+VK G C G L L+ E++P SL
Sbjct: 43 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 102
Query: 109 SSFSGTFK--DLLCLHKYSRL-----------RVIHRDLKASNILLDDQLNTKISDFGMA 155
+ D + L +Y+ R IHR+L NIL++++ KI DFG+
Sbjct: 103 DYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRNLATRNILVENENRVKIGDFGLT 162
Query: 156 RI-------FGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKIVCGKK 208
++ + V E G + + Y T S S+ +DV+ FGV++ ++ +
Sbjct: 163 KVLPQDKEYYKVKEPGESP-----IFWYAPESLTES-KFSVASDVWSFGVVLYELFTYIE 216
Query: 209 NNKS 212
+KS
Sbjct: 217 KSKS 220
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 66/147 (44%), Gaps = 19/147 (12%)
Query: 77 LQYTNLVKLLGCSIHGEERLLVYEF---------------MPNKSLDSSFSGTFKDLLCL 121
L + N+VK G G + L E+ MP F ++ L
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 120
Query: 122 HKYSRLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEY 181
H + + HRD+K N+LLD++ N KISDFG+A +F N N++ GT Y++ E
Sbjct: 121 HG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPEL 177
Query: 182 TMSGTVSIK-TDVFGFGVLVLKIVCGK 207
+ DV+ G+++ ++ G+
Sbjct: 178 LKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 66/147 (44%), Gaps = 19/147 (12%)
Query: 77 LQYTNLVKLLGCSIHGEERLLVYEF---------------MPNKSLDSSFSGTFKDLLCL 121
L + N+VK G G + L E+ MP F ++ L
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 120
Query: 122 HKYSRLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEY 181
H + + HRD+K N+LLD++ N KISDFG+A +F N N++ GT Y++ E
Sbjct: 121 HG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPEL 177
Query: 182 TMSGTVSIK-TDVFGFGVLVLKIVCGK 207
+ DV+ G+++ ++ G+
Sbjct: 178 LKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 66/147 (44%), Gaps = 19/147 (12%)
Query: 77 LQYTNLVKLLGCSIHGEERLLVYEF---------------MPNKSLDSSFSGTFKDLLCL 121
L + N+VK G G + L E+ MP F ++ L
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 121
Query: 122 HKYSRLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEY 181
H + + HRD+K N+LLD++ N KISDFG+A +F N N++ GT Y++ E
Sbjct: 122 HG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 178
Query: 182 TMSGTVSIK-TDVFGFGVLVLKIVCGK 207
+ DV+ G+++ ++ G+
Sbjct: 179 LKRREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 66/147 (44%), Gaps = 19/147 (12%)
Query: 77 LQYTNLVKLLGCSIHGEERLLVYEF---------------MPNKSLDSSFSGTFKDLLCL 121
L + N+VK G G + L E+ MP F ++ L
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 120
Query: 122 HKYSRLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEY 181
H + + HRD+K N+LLD++ N KISDFG+A +F N N++ GT Y++ E
Sbjct: 121 HG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 177
Query: 182 TMSGTVSIK-TDVFGFGVLVLKIVCGK 207
+ DV+ G+++ ++ G+
Sbjct: 178 LKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 66/147 (44%), Gaps = 19/147 (12%)
Query: 77 LQYTNLVKLLGCSIHGEERLLVYEF---------------MPNKSLDSSFSGTFKDLLCL 121
L + N+VK G G + L E+ MP F ++ L
Sbjct: 60 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 119
Query: 122 HKYSRLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEY 181
H + + HRD+K N+LLD++ N KISDFG+A +F N N++ GT Y++ E
Sbjct: 120 HG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 176
Query: 182 TMSGTVSIK-TDVFGFGVLVLKIVCGK 207
+ DV+ G+++ ++ G+
Sbjct: 177 LKRREFHAEPVDVWSCGIVLTAMLAGE 203
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 79/181 (43%), Gaps = 23/181 (12%)
Query: 48 EQEVAIKRLAWTSG-QGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKS 106
E VA+K + ++ + R+EF NEA ++ ++V+LLG G+ L+V E M +
Sbjct: 47 ETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGD 106
Query: 107 LDSSFSG--------------TFKDLLCLHK--------YSRLRVIHRDLKASNILLDDQ 144
L S T ++++ + + + +HRDL A N ++
Sbjct: 107 LKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHD 166
Query: 145 LNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKIV 204
KI DFGM R + + + +M+ E G + +D++ FGV++ +I
Sbjct: 167 FTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEIT 226
Query: 205 C 205
Sbjct: 227 S 227
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 79/181 (43%), Gaps = 23/181 (12%)
Query: 48 EQEVAIKRLAWTSG-QGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKS 106
E VA+K + ++ + R+EF NEA ++ ++V+LLG G+ L+V E M +
Sbjct: 44 ETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGD 103
Query: 107 LDSSFSG--------------TFKDLLCLHK--------YSRLRVIHRDLKASNILLDDQ 144
L S T ++++ + + + +HRDL A N ++
Sbjct: 104 LKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHD 163
Query: 145 LNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKIV 204
KI DFGM R + + + +M+ E G + +D++ FGV++ +I
Sbjct: 164 FTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEIT 223
Query: 205 C 205
Sbjct: 224 S 224
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 66/147 (44%), Gaps = 19/147 (12%)
Query: 77 LQYTNLVKLLGCSIHGEERLLVYEF---------------MPNKSLDSSFSGTFKDLLCL 121
L + N+VK G G + L E+ MP F ++ L
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 120
Query: 122 HKYSRLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEY 181
H + + HRD+K N+LLD++ N KISDFG+A +F N N++ GT Y++ E
Sbjct: 121 HG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 177
Query: 182 TMSGTVSIK-TDVFGFGVLVLKIVCGK 207
+ DV+ G+++ ++ G+
Sbjct: 178 LKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 66/147 (44%), Gaps = 19/147 (12%)
Query: 77 LQYTNLVKLLGCSIHGEERLLVYEF---------------MPNKSLDSSFSGTFKDLLCL 121
L + N+VK G G + L E+ MP F ++ L
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 120
Query: 122 HKYSRLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEY 181
H + + HRD+K N+LLD++ N KISDFG+A +F N N++ GT Y++ E
Sbjct: 121 HG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 177
Query: 182 TMSGTVSIK-TDVFGFGVLVLKIVCGK 207
+ DV+ G+++ ++ G+
Sbjct: 178 LKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 66/147 (44%), Gaps = 19/147 (12%)
Query: 77 LQYTNLVKLLGCSIHGEERLLVYEF---------------MPNKSLDSSFSGTFKDLLCL 121
L + N+VK G G + L E+ MP F ++ L
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 120
Query: 122 HKYSRLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEY 181
H + + HRD+K N+LLD++ N KISDFG+A +F N N++ GT Y++ E
Sbjct: 121 HG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 177
Query: 182 TMSGTVSIK-TDVFGFGVLVLKIVCGK 207
+ DV+ G+++ ++ G+
Sbjct: 178 LKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 66/147 (44%), Gaps = 19/147 (12%)
Query: 77 LQYTNLVKLLGCSIHGEERLLVYEF---------------MPNKSLDSSFSGTFKDLLCL 121
L + N+VK G G + L E+ MP F ++ L
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 120
Query: 122 HKYSRLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEY 181
H + + HRD+K N+LLD++ N KISDFG+A +F N N++ GT Y++ E
Sbjct: 121 HG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 177
Query: 182 TMSGTVSIK-TDVFGFGVLVLKIVCGK 207
+ DV+ G+++ ++ G+
Sbjct: 178 LKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 79/181 (43%), Gaps = 23/181 (12%)
Query: 48 EQEVAIKRLAWTSG-QGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKS 106
E VA+K + ++ + R+EF NEA ++ ++V+LLG G+ L+V E M +
Sbjct: 47 ETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGD 106
Query: 107 LDSSFSG--------------TFKDLLCLHK--------YSRLRVIHRDLKASNILLDDQ 144
L S T ++++ + + + +HRDL A N ++
Sbjct: 107 LKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHD 166
Query: 145 LNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKIV 204
KI DFGM R + + + +M+ E G + +D++ FGV++ +I
Sbjct: 167 FTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEIT 226
Query: 205 C 205
Sbjct: 227 S 227
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 66/147 (44%), Gaps = 19/147 (12%)
Query: 77 LQYTNLVKLLGCSIHGEERLLVYEF---------------MPNKSLDSSFSGTFKDLLCL 121
L + N+VK G G + L E+ MP F ++ L
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 120
Query: 122 HKYSRLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEY 181
H + + HRD+K N+LLD++ N KISDFG+A +F N N++ GT Y++ E
Sbjct: 121 HG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 177
Query: 182 TMSGTVSIK-TDVFGFGVLVLKIVCGK 207
+ DV+ G+++ ++ G+
Sbjct: 178 LKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 66/147 (44%), Gaps = 19/147 (12%)
Query: 77 LQYTNLVKLLGCSIHGEERLLVYEF---------------MPNKSLDSSFSGTFKDLLCL 121
L + N+VK G G + L E+ MP F ++ L
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 121
Query: 122 HKYSRLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEY 181
H + + HRD+K N+LLD++ N KISDFG+A +F N N++ GT Y++ E
Sbjct: 122 HG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 178
Query: 182 TMSGTVSIK-TDVFGFGVLVLKIVCGK 207
+ DV+ G+++ ++ G+
Sbjct: 179 LKRREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 66/147 (44%), Gaps = 19/147 (12%)
Query: 77 LQYTNLVKLLGCSIHGEERLLVYEF---------------MPNKSLDSSFSGTFKDLLCL 121
L + N+VK G G + L E+ MP F ++ L
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 120
Query: 122 HKYSRLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEY 181
H + + HRD+K N+LLD++ N KISDFG+A +F N N++ GT Y++ E
Sbjct: 121 HG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 177
Query: 182 TMSGTVSIK-TDVFGFGVLVLKIVCGK 207
+ DV+ G+++ ++ G+
Sbjct: 178 LKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 66/147 (44%), Gaps = 19/147 (12%)
Query: 77 LQYTNLVKLLGCSIHGEERLLVYEF---------------MPNKSLDSSFSGTFKDLLCL 121
L + N+VK G G + L E+ MP F ++ L
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 121
Query: 122 HKYSRLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEY 181
H + + HRD+K N+LLD++ N KISDFG+A +F N N++ GT Y++ E
Sbjct: 122 HG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 178
Query: 182 TMSGTVSIK-TDVFGFGVLVLKIVCGK 207
+ DV+ G+++ ++ G+
Sbjct: 179 LKRREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 66/147 (44%), Gaps = 19/147 (12%)
Query: 77 LQYTNLVKLLGCSIHGEERLLVYEF---------------MPNKSLDSSFSGTFKDLLCL 121
L + N+VK G G + L E+ MP F ++ L
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 121
Query: 122 HKYSRLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEY 181
H + + HRD+K N+LLD++ N KISDFG+A +F N N++ GT Y++ E
Sbjct: 122 HG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 178
Query: 182 TMSGTVSIK-TDVFGFGVLVLKIVCGK 207
+ DV+ G+++ ++ G+
Sbjct: 179 LKRREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 66/147 (44%), Gaps = 19/147 (12%)
Query: 77 LQYTNLVKLLGCSIHGEERLLVYEF---------------MPNKSLDSSFSGTFKDLLCL 121
L + N+VK G G + L E+ MP F ++ L
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 121
Query: 122 HKYSRLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEY 181
H + + HRD+K N+LLD++ N KISDFG+A +F N N++ GT Y++ E
Sbjct: 122 HG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 178
Query: 182 TMSGTVSIK-TDVFGFGVLVLKIVCGK 207
+ DV+ G+++ ++ G+
Sbjct: 179 LKRREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 66/147 (44%), Gaps = 19/147 (12%)
Query: 77 LQYTNLVKLLGCSIHGEERLLVYEF---------------MPNKSLDSSFSGTFKDLLCL 121
L + N+VK G G + L E+ MP F ++ L
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 120
Query: 122 HKYSRLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEY 181
H + + HRD+K N+LLD++ N KISDFG+A +F N N++ GT Y++ E
Sbjct: 121 HG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 177
Query: 182 TMSGTVSIK-TDVFGFGVLVLKIVCGK 207
+ DV+ G+++ ++ G+
Sbjct: 178 LKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 46/75 (61%), Gaps = 2/75 (2%)
Query: 129 VIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVS 188
V+HRDLK +N+ LD + N K+ DFG+ARI + S A T VGT YMS E + +
Sbjct: 137 VLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKT--FVGTPYYMSPEQMNRMSYN 194
Query: 189 IKTDVFGFGVLVLKI 203
K+D++ G L+ ++
Sbjct: 195 EKSDIWSLGCLLYEL 209
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 66/147 (44%), Gaps = 19/147 (12%)
Query: 77 LQYTNLVKLLGCSIHGEERLLVYEF---------------MPNKSLDSSFSGTFKDLLCL 121
L + N+VK G G + L E+ MP F ++ L
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 121
Query: 122 HKYSRLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEY 181
H + + HRD+K N+LLD++ N KISDFG+A +F N N++ GT Y++ E
Sbjct: 122 HG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 178
Query: 182 TMSGTVSIK-TDVFGFGVLVLKIVCGK 207
+ DV+ G+++ ++ G+
Sbjct: 179 LKRREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 47/87 (54%), Gaps = 3/87 (3%)
Query: 121 LHKYSRLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLE 180
L R R+++RDLK NILLDD + +ISD G+A V E R VGT GYM+ E
Sbjct: 299 LEDLHRERIVYRDLKPENILLDDHGHIRISDLGLA--VHVPEGQTIKGR-VGTVGYMAPE 355
Query: 181 YTMSGTVSIKTDVFGFGVLVLKIVCGK 207
+ + D + G L+ +++ G+
Sbjct: 356 VVKNERYTFSPDWWALGCLLYEMIAGQ 382
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 75/153 (49%), Gaps = 15/153 (9%)
Query: 66 EFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSLDSSFSGTFKD----LLCL 121
EF EA ++ ++++ NLV+LLG +V E+MP +L ++ ++ L
Sbjct: 74 EFLKEAAVMKEIKHPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYLRECNREEVTAVVLL 133
Query: 122 HKYSRLR----------VIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIV 171
+ +++ IHRDL A N L+ + K++DFG++R+ + A+
Sbjct: 134 YMATQISSAMEYLEKKNFIHRDLAARNCLVGENHVVKVADFGLSRLMTGDTYTAHAGAKF 193
Query: 172 GTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKIV 204
+ + E T SIK+DV+ FGVL+ +I
Sbjct: 194 PI-KWTAPESLAYNTFSIKSDVWAFGVLLWEIA 225
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 108/237 (45%), Gaps = 42/237 (17%)
Query: 51 VAIKRLAWTSGQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERL-LVYEFMPN----- 104
+ +K L + + F E K++ L++ N++K +G ++ ++RL + E++
Sbjct: 38 MVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGV-LYKDKRLNFITEYIKGGTLRG 96
Query: 105 --KSLDSSFSGT-----FKDLLCLHKY-SRLRVIHRDLKASNILLDDQLNTKISDFGMAR 156
KS+DS + + KD+ Y + +IHRDL + N L+ + N ++DFG+AR
Sbjct: 97 IIKSMDSQYPWSQRVSFAKDIASGMAYLHSMNIIHRDLNSHNCLVRENKNVVVADFGLAR 156
Query: 157 IFGVNESGANTNR------------IVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKIV 204
+ ++ R +VG +M+ E + K DVF FG+++ +I+
Sbjct: 157 LMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEII 216
Query: 205 CGKKNNKSYHTERPLNLVGIAWQLWNEGKDLELIDLTLDGSCPPN-EDAFLLVSCVC 260
G+ N + R ++ G+ + + LD CPPN +F ++ C
Sbjct: 217 -GRVNADPDYLPRTMDF-GLNVRGF------------LDRYCPPNCPPSFFPITVRC 259
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 47/87 (54%), Gaps = 3/87 (3%)
Query: 121 LHKYSRLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLE 180
L R R+++RDLK NILLDD + +ISD G+A V E R VGT GYM+ E
Sbjct: 299 LEDLHRERIVYRDLKPENILLDDHGHIRISDLGLA--VHVPEGQTIKGR-VGTVGYMAPE 355
Query: 181 YTMSGTVSIKTDVFGFGVLVLKIVCGK 207
+ + D + G L+ +++ G+
Sbjct: 356 VVKNERYTFSPDWWALGCLLYEMIAGQ 382
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 80/154 (51%), Gaps = 18/154 (11%)
Query: 69 NEAKLIAKLQYTNLVKLLGCSIHGEERL-LVYEFMPN---KSLDSS-FSGTFKDLLCLHK 123
E L+ +L + N+VKLL IH E +L LV+EF+ K +D+S +G L+ +
Sbjct: 58 REISLLKELNHPNIVKLLDV-IHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL 116
Query: 124 YSRL---------RVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTY 174
+ L RV+HRDLK N+L++ + K++DFG+AR FGV T+ +V T
Sbjct: 117 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR-TYTHEVV-TL 174
Query: 175 GYMSLEYTMSGT-VSIKTDVFGFGVLVLKIVCGK 207
Y + E + S D++ G + ++V +
Sbjct: 175 WYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRR 208
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 97/230 (42%), Gaps = 51/230 (22%)
Query: 50 EVAIKRL-AWTSGQGRVEFQNEAKLIAKL-QYTNLVKLLGCSIHGEERLLVYEFMPNKSL 107
+ AIKR+ + S +F E +++ KL + N++ LLG H L E+ P+ +L
Sbjct: 44 DAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNL 103
Query: 108 ------------DSSFS------GTFKDLLCLH----------KYSRLRVIHRDLKASNI 139
D +F+ T LH S+ + IHRDL A NI
Sbjct: 104 LDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNI 163
Query: 140 LLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVL 199
L+ + KI+DFG++R V V SL Y++ T +DV+ +GVL
Sbjct: 164 LVGENYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTT---NSDVWSYGVL 220
Query: 200 VLKIV-------CG-------KKNNKSYHTERPLN----LVGIAWQLWNE 231
+ +IV CG +K + Y E+PLN + + Q W E
Sbjct: 221 LWEIVSLGGTPYCGMTCAELYEKLPQGYRLEKPLNCDDEVYDLMRQCWRE 270
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 45/75 (60%), Gaps = 2/75 (2%)
Query: 129 VIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVS 188
V+HRDLK +N+ LD + N K+ DFG+ARI +E A VGT YMS E + +
Sbjct: 137 VLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDFA--KEFVGTPYYMSPEQMNRMSYN 194
Query: 189 IKTDVFGFGVLVLKI 203
K+D++ G L+ ++
Sbjct: 195 EKSDIWSLGCLLYEL 209
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 97/230 (42%), Gaps = 51/230 (22%)
Query: 50 EVAIKRL-AWTSGQGRVEFQNEAKLIAKL-QYTNLVKLLGCSIHGEERLLVYEFMPNKSL 107
+ AIKR+ + S +F E +++ KL + N++ LLG H L E+ P+ +L
Sbjct: 54 DAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNL 113
Query: 108 ------------DSSFS------GTFKDLLCLH----------KYSRLRVIHRDLKASNI 139
D +F+ T LH S+ + IHRDL A NI
Sbjct: 114 LDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNI 173
Query: 140 LLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVL 199
L+ + KI+DFG++R V V SL Y++ T +DV+ +GVL
Sbjct: 174 LVGENYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTT---NSDVWSYGVL 230
Query: 200 VLKIV-------CG-------KKNNKSYHTERPLN----LVGIAWQLWNE 231
+ +IV CG +K + Y E+PLN + + Q W E
Sbjct: 231 LWEIVSLGGTPYCGMTCAELYEKLPQGYRLEKPLNCDDEVYDLMRQCWRE 280
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 53/96 (55%), Gaps = 6/96 (6%)
Query: 122 HKYSRLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEY 181
H ++R V++RDLK +NILLD+ + +ISD G+A F + A+ VGT+GYM+ E
Sbjct: 306 HMHNRF-VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS----VGTHGYMAPEV 360
Query: 182 TMSGTV-SIKTDVFGFGVLVLKIVCGKKNNKSYHTE 216
G D F G ++ K++ G + + T+
Sbjct: 361 LQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTK 396
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 80/154 (51%), Gaps = 18/154 (11%)
Query: 69 NEAKLIAKLQYTNLVKLLGCSIHGEERL-LVYEFMPN---KSLDSS-FSGTFKDLLCLHK 123
E L+ +L + N+VKLL IH E +L LV+EF+ K +D+S +G L+ +
Sbjct: 55 REISLLKELNHPNIVKLLDV-IHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL 113
Query: 124 YSRL---------RVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTY 174
+ L RV+HRDLK N+L++ + K++DFG+AR FGV T+ +V T
Sbjct: 114 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEVV-TL 171
Query: 175 GYMSLEYTMS-GTVSIKTDVFGFGVLVLKIVCGK 207
Y + E + S D++ G + ++V +
Sbjct: 172 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 205
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 76/153 (49%), Gaps = 22/153 (14%)
Query: 67 FQNEAKLIAKLQYTNLVKLLGCSIHGEERL-LVYEFMPNKSLDSSFSGTFKDLL---CLH 122
F EA ++ +L+++NLV+LLG + + L +V E+M SL + +L CL
Sbjct: 52 FLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLL 111
Query: 123 KYSRLRV------------IHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRI 170
K+S L V +HRDL A N+L+ + K+SDFG+ + E+ + +
Sbjct: 112 KFS-LDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTK-----EASSTQDTG 165
Query: 171 VGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKI 203
+ + E S K+DV+ FG+L+ +I
Sbjct: 166 KLPVKWTAPEALREAAFSTKSDVWSFGILLWEI 198
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 79/181 (43%), Gaps = 23/181 (12%)
Query: 48 EQEVAIKRLAWTSG-QGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKS 106
E VA+K + ++ + R+EF NEA ++ ++V+LLG G+ L+V E M +
Sbjct: 47 ETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGD 106
Query: 107 LDSSFSG--------------TFKDLLCLHK--------YSRLRVIHRDLKASNILLDDQ 144
L S T ++++ + + + +HRDL A N ++
Sbjct: 107 LKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHD 166
Query: 145 LNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKIV 204
KI DFGM R + + + +M+ E G + +D++ FGV++ +I
Sbjct: 167 FTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEIT 226
Query: 205 C 205
Sbjct: 227 S 227
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 53/96 (55%), Gaps = 6/96 (6%)
Query: 122 HKYSRLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEY 181
H ++R V++RDLK +NILLD+ + +ISD G+A F + A+ VGT+GYM+ E
Sbjct: 307 HMHNRF-VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS----VGTHGYMAPEV 361
Query: 182 TMSGTV-SIKTDVFGFGVLVLKIVCGKKNNKSYHTE 216
G D F G ++ K++ G + + T+
Sbjct: 362 LQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTK 397
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 53/96 (55%), Gaps = 6/96 (6%)
Query: 122 HKYSRLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEY 181
H ++R V++RDLK +NILLD+ + +ISD G+A F + A+ VGT+GYM+ E
Sbjct: 307 HMHNRF-VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS----VGTHGYMAPEV 361
Query: 182 TMSGTV-SIKTDVFGFGVLVLKIVCGKKNNKSYHTE 216
G D F G ++ K++ G + + T+
Sbjct: 362 LQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTK 397
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 80/154 (51%), Gaps = 18/154 (11%)
Query: 69 NEAKLIAKLQYTNLVKLLGCSIHGEERL-LVYEFMPN---KSLDSS-FSGTFKDLLCLHK 123
E L+ +L + N+VKLL IH E +L LV+EF+ K +D+S +G L+ +
Sbjct: 51 REISLLKELNHPNIVKLLDV-IHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL 109
Query: 124 YSRL---------RVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTY 174
+ L RV+HRDLK N+L++ + K++DFG+AR FGV T+ +V T
Sbjct: 110 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEVV-TL 167
Query: 175 GYMSLEYTMSGT-VSIKTDVFGFGVLVLKIVCGK 207
Y + E + S D++ G + ++V +
Sbjct: 168 WYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 53/96 (55%), Gaps = 6/96 (6%)
Query: 122 HKYSRLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEY 181
H ++R V++RDLK +NILLD+ + +ISD G+A F + A+ VGT+GYM+ E
Sbjct: 307 HMHNRF-VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS----VGTHGYMAPEV 361
Query: 182 TMSGTV-SIKTDVFGFGVLVLKIVCGKKNNKSYHTE 216
G D F G ++ K++ G + + T+
Sbjct: 362 LQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTK 397
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 81/178 (45%), Gaps = 15/178 (8%)
Query: 39 VILVGKFPNEQEVAIKRLAWTSGQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLV 98
V+ +GK+ + +VA+K + EF EA+ + KL + LVK G +V
Sbjct: 23 VVKLGKWKGQYDVAVKMIK-EGSMSEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIV 81
Query: 99 YEFMPNKSLDSSFSGTFKDL-------LC------LHKYSRLRVIHRDLKASNILLDDQL 145
E++ N L + K L +C + + IHRDL A N L+D L
Sbjct: 82 TEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESHQFIHRDLAARNCLVDRDL 141
Query: 146 NTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKI 203
K+SDFGM R + +++ ++ + + E S K+DV+ FG+L+ ++
Sbjct: 142 CVKVSDFGMTR-YVLDDQYVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEV 198
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 80/154 (51%), Gaps = 18/154 (11%)
Query: 69 NEAKLIAKLQYTNLVKLLGCSIHGEERL-LVYEFMPN---KSLDSS-FSGTFKDLLCLHK 123
E L+ +L + N+VKLL IH E +L LV+EF+ K +D+S +G L+ +
Sbjct: 51 REISLLKELNHPNIVKLLDV-IHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL 109
Query: 124 YSRL---------RVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTY 174
+ L RV+HRDLK N+L++ + K++DFG+AR FGV T+ +V T
Sbjct: 110 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEVV-TL 167
Query: 175 GYMSLEYTMS-GTVSIKTDVFGFGVLVLKIVCGK 207
Y + E + S D++ G + ++V +
Sbjct: 168 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 80/154 (51%), Gaps = 18/154 (11%)
Query: 69 NEAKLIAKLQYTNLVKLLGCSIHGEERL-LVYEFMPN---KSLDSS-FSGTFKDLLCLHK 123
E L+ +L + N+VKLL IH E +L LV+EF+ K +D+S +G L+ +
Sbjct: 50 REISLLKELNHPNIVKLLDV-IHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL 108
Query: 124 YSRL---------RVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTY 174
+ L RV+HRDLK N+L++ + K++DFG+AR FGV T+ +V T
Sbjct: 109 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEVV-TL 166
Query: 175 GYMSLEYTMS-GTVSIKTDVFGFGVLVLKIVCGK 207
Y + E + S D++ G + ++V +
Sbjct: 167 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 80/154 (51%), Gaps = 18/154 (11%)
Query: 69 NEAKLIAKLQYTNLVKLLGCSIHGEERL-LVYEFMPN---KSLDSS-FSGTFKDLLCLHK 123
E L+ +L + N+VKLL IH E +L LV+EF+ K +D+S +G L+ +
Sbjct: 51 REISLLKELNHPNIVKLLDV-IHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL 109
Query: 124 YSRL---------RVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTY 174
+ L RV+HRDLK N+L++ + K++DFG+AR FGV T+ +V T
Sbjct: 110 FQLLQGLSFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEVV-TL 167
Query: 175 GYMSLEYTMS-GTVSIKTDVFGFGVLVLKIVCGK 207
Y + E + S D++ G + ++V +
Sbjct: 168 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 61/106 (57%), Gaps = 15/106 (14%)
Query: 69 NEAKLIAKLQYTNLVKLLGCSIHGEERL-LVYEFMP---NKSLDSS-FSGTFKDLLCLHK 123
E L+ +L + N+VKLL IH E +L LV+EF+ K +D+S +G L+ +
Sbjct: 54 REISLLKELNHPNIVKLLDV-IHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYL 112
Query: 124 YSRL---------RVIHRDLKASNILLDDQLNTKISDFGMARIFGV 160
+ L RV+HRDLK N+L++ + K++DFG+AR FGV
Sbjct: 113 FQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGV 158
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 80/154 (51%), Gaps = 18/154 (11%)
Query: 69 NEAKLIAKLQYTNLVKLLGCSIHGEERL-LVYEFMPN---KSLDSS-FSGTFKDLLCLHK 123
E L+ +L + N+VKLL IH E +L LV+EF+ K +D+S +G L+ +
Sbjct: 51 REISLLKELNHPNIVKLLDV-IHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL 109
Query: 124 YSRL---------RVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTY 174
+ L RV+HRDLK N+L++ + K++DFG+AR FGV T+ +V T
Sbjct: 110 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEVV-TL 167
Query: 175 GYMSLEYTMS-GTVSIKTDVFGFGVLVLKIVCGK 207
Y + E + S D++ G + ++V +
Sbjct: 168 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 80/154 (51%), Gaps = 18/154 (11%)
Query: 69 NEAKLIAKLQYTNLVKLLGCSIHGEERL-LVYEFMPN---KSLDSS-FSGTFKDLLCLHK 123
E L+ +L + N+VKLL IH E +L LV+EF+ K +D+S +G L+ +
Sbjct: 50 REISLLKELNHPNIVKLLDV-IHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL 108
Query: 124 YSRL---------RVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTY 174
+ L RV+HRDLK N+L++ + K++DFG+AR FGV T+ +V T
Sbjct: 109 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEVV-TL 166
Query: 175 GYMSLEYTMS-GTVSIKTDVFGFGVLVLKIVCGK 207
Y + E + S D++ G + ++V +
Sbjct: 167 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 85/190 (44%), Gaps = 23/190 (12%)
Query: 49 QEVAIKRLAWTSGQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEF------- 101
Q VAIK++ S E E ++ + ++VK G + +V E+
Sbjct: 55 QIVAIKQVPVESDLQ--EIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVS 112
Query: 102 ----MPNKSLDSS-----FSGTFKDLLCLHKYSRLRVIHRDLKASNILLDDQLNTKISDF 152
+ NK+L T K L LH +R IHRD+KA NILL+ + + K++DF
Sbjct: 113 DIIRLRNKTLTEDEIATILQSTLKGLEYLH---FMRKIHRDIKAGNILLNTEGHAKLADF 169
Query: 153 GMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKIVCGKKNNKS 212
G+A + + A N ++GT +M+ E + D++ G+ +++ GK
Sbjct: 170 GVAG--QLTDXMAKRNXVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYAD 227
Query: 213 YHTERPLNLV 222
H R + ++
Sbjct: 228 IHPMRAIFMI 237
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 61/106 (57%), Gaps = 15/106 (14%)
Query: 69 NEAKLIAKLQYTNLVKLLGCSIHGEERL-LVYEFMP---NKSLDSS-FSGTFKDLLCLHK 123
E L+ +L + N+VKLL IH E +L LV+EF+ K +D+S +G L+ +
Sbjct: 52 REISLLKELNHPNIVKLLDV-IHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYL 110
Query: 124 YSRL---------RVIHRDLKASNILLDDQLNTKISDFGMARIFGV 160
+ L RV+HRDLK N+L++ + K++DFG+AR FGV
Sbjct: 111 FQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGV 156
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 80/154 (51%), Gaps = 18/154 (11%)
Query: 69 NEAKLIAKLQYTNLVKLLGCSIHGEERL-LVYEFMPN---KSLDSS-FSGTFKDLLCLHK 123
E L+ +L + N+VKLL IH E +L LV+EF+ K +D+S +G L+ +
Sbjct: 58 REISLLKELNHPNIVKLLDV-IHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL 116
Query: 124 YSRL---------RVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTY 174
+ L RV+HRDLK N+L++ + K++DFG+AR FGV T+ +V T
Sbjct: 117 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR-TYTHEVV-TL 174
Query: 175 GYMSLEYTMS-GTVSIKTDVFGFGVLVLKIVCGK 207
Y + E + S D++ G + ++V +
Sbjct: 175 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 208
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 55/104 (52%), Gaps = 7/104 (6%)
Query: 129 VIHRDLKASNILLDDQLNTKISDFGMAR-IFGVNESGANTNRIVGTYGYMSLEYTMSGTV 187
+IHRD+K +NIL+ K+ DFG+AR I S T ++GT Y+S E +V
Sbjct: 137 IIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQARGDSV 196
Query: 188 SIKTDVFGFGVLVLKIVCGKKNNKSYHTERPLNLVGIAWQLWNE 231
++DV+ G ++ +++ G+ + + P V +A+Q E
Sbjct: 197 DARSDVYSLGCVLYEVLTGE---PPFTGDSP---VSVAYQHVRE 234
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 80/154 (51%), Gaps = 18/154 (11%)
Query: 69 NEAKLIAKLQYTNLVKLLGCSIHGEERL-LVYEFMPN---KSLDSS-FSGTFKDLLCLHK 123
E L+ +L + N+VKLL IH E +L LV+EF+ K +D+S +G L+ +
Sbjct: 50 REISLLKELNHPNIVKLLDV-IHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL 108
Query: 124 YSRL---------RVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTY 174
+ L RV+HRDLK N+L++ + K++DFG+AR FGV T+ +V T
Sbjct: 109 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEVV-TL 166
Query: 175 GYMSLEYTMS-GTVSIKTDVFGFGVLVLKIVCGK 207
Y + E + S D++ G + ++V +
Sbjct: 167 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 80/154 (51%), Gaps = 18/154 (11%)
Query: 69 NEAKLIAKLQYTNLVKLLGCSIHGEERL-LVYEFMPN---KSLDSS-FSGTFKDLLCLHK 123
E L+ +L + N+VKLL IH E +L LV+EF+ K +D+S +G L+ +
Sbjct: 51 REISLLKELNHPNIVKLLDV-IHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL 109
Query: 124 YSRL---------RVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTY 174
+ L RV+HRDLK N+L++ + K++DFG+AR FGV T+ +V T
Sbjct: 110 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEVV-TL 167
Query: 175 GYMSLEYTMS-GTVSIKTDVFGFGVLVLKIVCGK 207
Y + E + S D++ G + ++V +
Sbjct: 168 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 80/154 (51%), Gaps = 18/154 (11%)
Query: 69 NEAKLIAKLQYTNLVKLLGCSIHGEERL-LVYEFMPN---KSLDSS-FSGTFKDLLCLHK 123
E L+ +L + N+VKLL IH E +L LV+EF+ K +D+S +G L+ +
Sbjct: 52 REISLLKELNHPNIVKLLDV-IHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL 110
Query: 124 YSRL---------RVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTY 174
+ L RV+HRDLK N+L++ + K++DFG+AR FGV T+ +V T
Sbjct: 111 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEVV-TL 168
Query: 175 GYMSLEYTMS-GTVSIKTDVFGFGVLVLKIVCGK 207
Y + E + S D++ G + ++V +
Sbjct: 169 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 79/181 (43%), Gaps = 23/181 (12%)
Query: 48 EQEVAIKRLAWTSG-QGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKS 106
E VA+K + ++ + R+EF NEA ++ ++V+LLG G+ L+V E M +
Sbjct: 46 ETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGD 105
Query: 107 LDSSFSG--------------TFKDLLCLHK--------YSRLRVIHRDLKASNILLDDQ 144
L S T ++++ + + + +HRDL A N ++
Sbjct: 106 LKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHD 165
Query: 145 LNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKIV 204
KI DFGM R + + + +M+ E G + +D++ FGV++ +I
Sbjct: 166 FTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEIT 225
Query: 205 C 205
Sbjct: 226 S 226
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 45/75 (60%), Gaps = 2/75 (2%)
Query: 129 VIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVS 188
V+HRDLK +N+ LD + N K+ DFG+ARI + S A VGT YMS E + +
Sbjct: 137 VLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKA--FVGTPYYMSPEQMNRMSYN 194
Query: 189 IKTDVFGFGVLVLKI 203
K+D++ G L+ ++
Sbjct: 195 EKSDIWSLGCLLYEL 209
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 61/106 (57%), Gaps = 15/106 (14%)
Query: 69 NEAKLIAKLQYTNLVKLLGCSIHGEERL-LVYEFMPN---KSLDSS-FSGTFKDLLCLHK 123
E L+ +L + N+VKLL IH E +L LV+EF+ K +D+S +G L+ +
Sbjct: 50 REISLLKELNHPNIVKLLDV-IHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL 108
Query: 124 YSRL---------RVIHRDLKASNILLDDQLNTKISDFGMARIFGV 160
+ L RV+HRDLK N+L++ + K++DFG+AR FGV
Sbjct: 109 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGV 154
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 83/169 (49%), Gaps = 17/169 (10%)
Query: 51 VAIKRL-AWTSGQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSLDS 109
VAIK L TS + E +EA ++A + ++ +LLG + +L++ + MP L
Sbjct: 47 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCL-L 104
Query: 110 SFSGTFKDLL--------CLHKYSRL------RVIHRDLKASNILLDDQLNTKISDFGMA 155
+ KD + C+ + R++HRDL A N+L+ + KI+DFG+A
Sbjct: 105 DYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 164
Query: 156 RIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKIV 204
++ G E + +M+LE + + ++DV+ +GV V +++
Sbjct: 165 KLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELM 213
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 61/106 (57%), Gaps = 15/106 (14%)
Query: 69 NEAKLIAKLQYTNLVKLLGCSIHGEERL-LVYEFMPN---KSLDSS-FSGTFKDLLCLHK 123
E L+ +L + N+VKLL IH E +L LV+EF+ K +D+S +G L+ +
Sbjct: 53 REISLLKELNHPNIVKLLDV-IHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL 111
Query: 124 YSRL---------RVIHRDLKASNILLDDQLNTKISDFGMARIFGV 160
+ L RV+HRDLK N+L++ + K++DFG+AR FGV
Sbjct: 112 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGV 157
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/105 (38%), Positives = 61/105 (58%), Gaps = 15/105 (14%)
Query: 70 EAKLIAKLQYTNLVKLLGCSIHGEERL-LVYEFMPN---KSLDSS-FSGTFKDLLCLHKY 124
E L+ +L + N+VKLL IH E +L LV+EF+ K +D+S +G L+ + +
Sbjct: 52 EISLLKELNHPNIVKLLDV-IHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLF 110
Query: 125 SRL---------RVIHRDLKASNILLDDQLNTKISDFGMARIFGV 160
L RV+HRDLK N+L++ + K++DFG+AR FGV
Sbjct: 111 QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGV 155
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 61/106 (57%), Gaps = 15/106 (14%)
Query: 69 NEAKLIAKLQYTNLVKLLGCSIHGEERL-LVYEFMPN---KSLDSS-FSGTFKDLLCLHK 123
E L+ +L + N+VKLL IH E +L LV+EF+ K +D+S +G L+ +
Sbjct: 53 REISLLKELNHPNIVKLLDV-IHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL 111
Query: 124 YSRL---------RVIHRDLKASNILLDDQLNTKISDFGMARIFGV 160
+ L RV+HRDLK N+L++ + K++DFG+AR FGV
Sbjct: 112 FQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGV 157
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 59/105 (56%), Gaps = 15/105 (14%)
Query: 70 EAKLIAKLQYTNLVKLLGCSIHGEERL-LVYEFMPNKSLD----SSFSGTFKDLLCLHKY 124
E L+ +L + N+VKLL IH E +L LV+EF+ D S+ +G L+ + +
Sbjct: 52 EISLLKELNHPNIVKLLDV-IHTENKLYLVFEFLHQDLKDFMDASALTGIPLPLIKSYLF 110
Query: 125 SRL---------RVIHRDLKASNILLDDQLNTKISDFGMARIFGV 160
L RV+HRDLK N+L++ + K++DFG+AR FGV
Sbjct: 111 QLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGV 155
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 61/106 (57%), Gaps = 15/106 (14%)
Query: 69 NEAKLIAKLQYTNLVKLLGCSIHGEERL-LVYEFMPN---KSLDSS-FSGTFKDLLCLHK 123
E L+ +L + N+VKLL IH E +L LV+EF+ K +D+S +G L+ +
Sbjct: 54 REISLLKELNHPNIVKLLDV-IHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL 112
Query: 124 YSRL---------RVIHRDLKASNILLDDQLNTKISDFGMARIFGV 160
+ L RV+HRDLK N+L++ + K++DFG+AR FGV
Sbjct: 113 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGV 158
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 61/106 (57%), Gaps = 15/106 (14%)
Query: 69 NEAKLIAKLQYTNLVKLLGCSIHGEERL-LVYEFMPN---KSLDSS-FSGTFKDLLCLHK 123
E L+ +L + N+VKLL IH E +L LV+EF+ K +D+S +G L+ +
Sbjct: 54 REISLLKELNHPNIVKLLDV-IHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL 112
Query: 124 YSRL---------RVIHRDLKASNILLDDQLNTKISDFGMARIFGV 160
+ L RV+HRDLK N+L++ + K++DFG+AR FGV
Sbjct: 113 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGV 158
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 61/106 (57%), Gaps = 15/106 (14%)
Query: 69 NEAKLIAKLQYTNLVKLLGCSIHGEERL-LVYEFMPN---KSLDSS-FSGTFKDLLCLHK 123
E L+ +L + N+VKLL IH E +L LV+EF+ K +D+S +G L+ +
Sbjct: 53 REISLLKELNHPNIVKLLDV-IHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL 111
Query: 124 YSRL---------RVIHRDLKASNILLDDQLNTKISDFGMARIFGV 160
+ L RV+HRDLK N+L++ + K++DFG+AR FGV
Sbjct: 112 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGV 157
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 83/169 (49%), Gaps = 17/169 (10%)
Query: 51 VAIKRL-AWTSGQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSLDS 109
VAIK L TS + E +EA ++A + ++ +LLG + +L++ + MP L
Sbjct: 51 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCL-L 108
Query: 110 SFSGTFKDLL--------CLHKYSRL------RVIHRDLKASNILLDDQLNTKISDFGMA 155
+ KD + C+ + R++HRDL A N+L+ + KI+DFG+A
Sbjct: 109 DYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 168
Query: 156 RIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKIV 204
++ G E + +M+LE + + ++DV+ +GV V +++
Sbjct: 169 KLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELM 217
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 83/169 (49%), Gaps = 17/169 (10%)
Query: 51 VAIKRL-AWTSGQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSLDS 109
VAIK L TS + E +EA ++A + ++ +LLG + +L++ + MP L
Sbjct: 48 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGXL-L 105
Query: 110 SFSGTFKDLL--------CLHKYSRL------RVIHRDLKASNILLDDQLNTKISDFGMA 155
+ KD + C+ + R++HRDL A N+L+ + KI+DFG+A
Sbjct: 106 DYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 165
Query: 156 RIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKIV 204
++ G E + +M+LE + + ++DV+ +GV V +++
Sbjct: 166 KLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELM 214
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 61/106 (57%), Gaps = 15/106 (14%)
Query: 69 NEAKLIAKLQYTNLVKLLGCSIHGEERL-LVYEFMPN---KSLDSS-FSGTFKDLLCLHK 123
E L+ +L + N+VKLL IH E +L LV+EF+ K +D+S +G L+ +
Sbjct: 50 REISLLKELNHPNIVKLLDV-IHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL 108
Query: 124 YSRL---------RVIHRDLKASNILLDDQLNTKISDFGMARIFGV 160
+ L RV+HRDLK N+L++ + K++DFG+AR FGV
Sbjct: 109 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGV 154
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 61/106 (57%), Gaps = 15/106 (14%)
Query: 69 NEAKLIAKLQYTNLVKLLGCSIHGEERL-LVYEFMPN---KSLDSS-FSGTFKDLLCLHK 123
E L+ +L + N+VKLL IH E +L LV+EF+ K +D+S +G L+ +
Sbjct: 52 REISLLKELNHPNIVKLLDV-IHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL 110
Query: 124 YSRL---------RVIHRDLKASNILLDDQLNTKISDFGMARIFGV 160
+ L RV+HRDLK N+L++ + K++DFG+AR FGV
Sbjct: 111 FQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGV 156
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 61/106 (57%), Gaps = 15/106 (14%)
Query: 69 NEAKLIAKLQYTNLVKLLGCSIHGEERL-LVYEFMPN---KSLDSS-FSGTFKDLLCLHK 123
E L+ +L + N+VKLL IH E +L LV+EF+ K +D+S +G L+ +
Sbjct: 51 REISLLKELNHPNIVKLLDV-IHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL 109
Query: 124 YSRL---------RVIHRDLKASNILLDDQLNTKISDFGMARIFGV 160
+ L RV+HRDLK N+L++ + K++DFG+AR FGV
Sbjct: 110 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGV 155
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 83/169 (49%), Gaps = 17/169 (10%)
Query: 51 VAIKRL-AWTSGQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSLDS 109
VAIK L TS + E +EA ++A + ++ +LLG + +L++ + MP L
Sbjct: 48 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCL-L 105
Query: 110 SFSGTFKDLL--------CLHKYSRL------RVIHRDLKASNILLDDQLNTKISDFGMA 155
+ KD + C+ + R++HRDL A N+L+ + KI+DFG+A
Sbjct: 106 DYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 165
Query: 156 RIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKIV 204
++ G E + +M+LE + + ++DV+ +GV V +++
Sbjct: 166 KLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELM 214
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 61/106 (57%), Gaps = 15/106 (14%)
Query: 69 NEAKLIAKLQYTNLVKLLGCSIHGEERL-LVYEFMPN---KSLDSS-FSGTFKDLLCLHK 123
E L+ +L + N+VKLL IH E +L LV+EF+ K +D+S +G L+ +
Sbjct: 51 REISLLKELNHPNIVKLLDV-IHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL 109
Query: 124 YSRL---------RVIHRDLKASNILLDDQLNTKISDFGMARIFGV 160
+ L RV+HRDLK N+L++ + K++DFG+AR FGV
Sbjct: 110 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGV 155
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/105 (38%), Positives = 61/105 (58%), Gaps = 15/105 (14%)
Query: 70 EAKLIAKLQYTNLVKLLGCSIHGEERL-LVYEFMPN---KSLDSS-FSGTFKDLLCLHKY 124
E L+ +L + N+VKLL IH E +L LV+EF+ K +D+S +G L+ + +
Sbjct: 53 EISLLKELNHPNIVKLLDV-IHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLF 111
Query: 125 SRL---------RVIHRDLKASNILLDDQLNTKISDFGMARIFGV 160
L RV+HRDLK N+L++ + K++DFG+AR FGV
Sbjct: 112 QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGV 156
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 61/106 (57%), Gaps = 15/106 (14%)
Query: 69 NEAKLIAKLQYTNLVKLLGCSIHGEERL-LVYEFMPN---KSLDSS-FSGTFKDLLCLHK 123
E L+ +L + N+VKLL IH E +L LV+EF+ K +D+S +G L+ +
Sbjct: 55 REISLLKELNHPNIVKLLDV-IHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL 113
Query: 124 YSRL---------RVIHRDLKASNILLDDQLNTKISDFGMARIFGV 160
+ L RV+HRDLK N+L++ + K++DFG+AR FGV
Sbjct: 114 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGV 159
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 61/106 (57%), Gaps = 15/106 (14%)
Query: 69 NEAKLIAKLQYTNLVKLLGCSIHGEERL-LVYEFMPN---KSLDSS-FSGTFKDLLCLHK 123
E L+ +L + N+VKLL IH E +L LV+EF+ K +D+S +G L+ +
Sbjct: 52 REISLLKELNHPNIVKLLDV-IHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL 110
Query: 124 YSRL---------RVIHRDLKASNILLDDQLNTKISDFGMARIFGV 160
+ L RV+HRDLK N+L++ + K++DFG+AR FGV
Sbjct: 111 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGV 156
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 84/194 (43%), Gaps = 28/194 (14%)
Query: 66 EFQNEAKLIAKLQYTNLVKLLGCSIHGEERL-LVYEFMPNKSL----------DSSFSGT 114
+ + E ++ + L++ N++++ H +R+ L+ EF P L D S T
Sbjct: 60 QLRREIEIQSHLRHPNILRMYNY-FHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSAT 118
Query: 115 FKDLLC--LHKYSRLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVG 172
F + L LH +VIHRD+K N+L+ + KI+DFG + V+ + G
Sbjct: 119 FMEELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFG----WSVHAPSLRRRXMCG 174
Query: 173 TYGYMSLEYTMSGTVSIKTDVFGFGVLVLKIVCGKKN-NKSYHTERPLNLVGIAWQLWNE 231
T Y+ E T K D++ GVL + + G + HTE +V +
Sbjct: 175 TLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNV------- 227
Query: 232 GKDLELIDLTLDGS 245
DL+ DGS
Sbjct: 228 --DLKFPPFLSDGS 239
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 84/194 (43%), Gaps = 28/194 (14%)
Query: 66 EFQNEAKLIAKLQYTNLVKLLGCSIHGEERL-LVYEFMPNKSL----------DSSFSGT 114
+ + E ++ + L++ N++++ H +R+ L+ EF P L D S T
Sbjct: 60 QLRREIEIQSHLRHPNILRMYNY-FHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSAT 118
Query: 115 FKDLLC--LHKYSRLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVG 172
F + L LH +VIHRD+K N+L+ + KI+DFG + V+ + G
Sbjct: 119 FMEELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFG----WSVHAPSLRRRXMCG 174
Query: 173 TYGYMSLEYTMSGTVSIKTDVFGFGVLVLKIVCGKKN-NKSYHTERPLNLVGIAWQLWNE 231
T Y+ E T K D++ GVL + + G + HTE +V +
Sbjct: 175 TLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNV------- 227
Query: 232 GKDLELIDLTLDGS 245
DL+ DGS
Sbjct: 228 --DLKFPPFLSDGS 239
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 82/169 (48%), Gaps = 17/169 (10%)
Query: 51 VAIKRL-AWTSGQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSLDS 109
VAIK L TS + E +EA ++A + ++ +LLG + +L+ + MP L
Sbjct: 57 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCL-L 114
Query: 110 SFSGTFKDLL--------CLHKYSRL------RVIHRDLKASNILLDDQLNTKISDFGMA 155
+ KD + C+ + R++HRDL A N+L+ + KI+DFG+A
Sbjct: 115 DYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 174
Query: 156 RIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKIV 204
++ G E + +M+LE + + ++DV+ +GV V +++
Sbjct: 175 KLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELM 223
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 84/194 (43%), Gaps = 28/194 (14%)
Query: 66 EFQNEAKLIAKLQYTNLVKLLGCSIHGEERL-LVYEFMPNKSL----------DSSFSGT 114
+ + E ++ + L++ N++++ H +R+ L+ EF P L D S T
Sbjct: 61 QLRREIEIQSHLRHPNILRMYNY-FHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSAT 119
Query: 115 FKDLLC--LHKYSRLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVG 172
F + L LH +VIHRD+K N+L+ + KI+DFG + V+ + G
Sbjct: 120 FMEELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFG----WSVHAPSLRRRXMCG 175
Query: 173 TYGYMSLEYTMSGTVSIKTDVFGFGVLVLKIVCGKKN-NKSYHTERPLNLVGIAWQLWNE 231
T Y+ E T K D++ GVL + + G + HTE +V +
Sbjct: 176 TLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNV------- 228
Query: 232 GKDLELIDLTLDGS 245
DL+ DGS
Sbjct: 229 --DLKFPPFLSDGS 240
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 83/169 (49%), Gaps = 17/169 (10%)
Query: 51 VAIKRL-AWTSGQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSLDS 109
VAIK L TS + E +EA ++A + ++ +LLG + +L++ + MP L
Sbjct: 50 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCL-L 107
Query: 110 SFSGTFKDLL--------CLHKYSRL------RVIHRDLKASNILLDDQLNTKISDFGMA 155
+ KD + C+ + R++HRDL A N+L+ + KI+DFG+A
Sbjct: 108 DYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 167
Query: 156 RIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKIV 204
++ G E + +M+LE + + ++DV+ +GV V +++
Sbjct: 168 KLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELM 216
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 82/169 (48%), Gaps = 17/169 (10%)
Query: 51 VAIKRL-AWTSGQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSLDS 109
VAIK L TS + E +EA ++A + ++ +LLG + +L+ + MP L
Sbjct: 47 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCL-L 104
Query: 110 SFSGTFKDLL--------CLHKYSRL------RVIHRDLKASNILLDDQLNTKISDFGMA 155
+ KD + C+ + R++HRDL A N+L+ + KI+DFG+A
Sbjct: 105 DYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 164
Query: 156 RIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKIV 204
++ G E + +M+LE + + ++DV+ +GV V +++
Sbjct: 165 KLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELM 213
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 83/169 (49%), Gaps = 17/169 (10%)
Query: 51 VAIKRL-AWTSGQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSLDS 109
VAIK L TS + E +EA ++A + ++ +LLG + +L++ + MP L
Sbjct: 54 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCL-L 111
Query: 110 SFSGTFKDLL--------CLHKYSRL------RVIHRDLKASNILLDDQLNTKISDFGMA 155
+ KD + C+ + R++HRDL A N+L+ + KI+DFG+A
Sbjct: 112 DYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 171
Query: 156 RIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKIV 204
++ G E + +M+LE + + ++DV+ +GV V +++
Sbjct: 172 KLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELM 220
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 82/169 (48%), Gaps = 17/169 (10%)
Query: 51 VAIKRL-AWTSGQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSLDS 109
VAIK L TS + E +EA ++A + ++ +LLG + +L+ + MP L
Sbjct: 47 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGXL-L 104
Query: 110 SFSGTFKDLL--------CLHKYSRL------RVIHRDLKASNILLDDQLNTKISDFGMA 155
+ KD + C+ + R++HRDL A N+L+ + KI+DFG+A
Sbjct: 105 DYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 164
Query: 156 RIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKIV 204
++ G E + +M+LE + + ++DV+ +GV V +++
Sbjct: 165 KLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELM 213
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 86/168 (51%), Gaps = 15/168 (8%)
Query: 51 VAIKRLAW-TSGQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSL-- 107
VAIK L TS + E +EA ++A + + +LLG + +L V + MP L
Sbjct: 49 VAIKVLRENTSPKANKEILDEAYVMAGVGSPYVSRLLGICLTSTVQL-VTQLMPYGCLLD 107
Query: 108 ---DSSFSGTFKDLL--CLH------KYSRLRVIHRDLKASNILLDDQLNTKISDFGMAR 156
++ +DLL C+ +R++HRDL A N+L+ + KI+DFG+AR
Sbjct: 108 HVRENRGRLGSQDLLNWCMQIAKGMSYLEDVRLVHRDLAARNVLVKSPNHVKITDFGLAR 167
Query: 157 IFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKIV 204
+ ++E+ + + +M+LE + + ++DV+ +GV V +++
Sbjct: 168 LLDIDETEYHADGGKVPIKWMALESILRRRFTHQSDVWSYGVTVWELM 215
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 83/169 (49%), Gaps = 17/169 (10%)
Query: 51 VAIKRL-AWTSGQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSLDS 109
VAIK L TS + E +EA ++A + ++ +LLG + +L++ + MP L
Sbjct: 49 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCL-L 106
Query: 110 SFSGTFKDLL--------CLHKYSRL------RVIHRDLKASNILLDDQLNTKISDFGMA 155
+ KD + C+ + R++HRDL A N+L+ + KI+DFG+A
Sbjct: 107 DYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 166
Query: 156 RIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKIV 204
++ G E + +M+LE + + ++DV+ +GV V +++
Sbjct: 167 KLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELM 215
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 59/106 (55%), Gaps = 15/106 (14%)
Query: 69 NEAKLIAKLQYTNLVKLLGCSIHGEERL-LVYEFMPNKSLD----SSFSGTFKDLLCLHK 123
E L+ +L + N+VKLL IH E +L LV+EF+ D S+ +G L+ +
Sbjct: 54 REISLLKELNHPNIVKLLDV-IHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYL 112
Query: 124 YSRL---------RVIHRDLKASNILLDDQLNTKISDFGMARIFGV 160
+ L RV+HRDLK N+L++ + K++DFG+AR FGV
Sbjct: 113 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGV 158
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/105 (38%), Positives = 61/105 (58%), Gaps = 15/105 (14%)
Query: 70 EAKLIAKLQYTNLVKLLGCSIHGEERL-LVYEFMPN---KSLDSS-FSGTFKDLLCLHKY 124
E L+ +L + N+VKLL IH E +L LV+EF+ K +D+S +G L+ + +
Sbjct: 52 EISLLKELNHPNIVKLLDV-IHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLF 110
Query: 125 SRL---------RVIHRDLKASNILLDDQLNTKISDFGMARIFGV 160
L RV+HRDLK N+L++ + K++DFG+AR FGV
Sbjct: 111 QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGV 155
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 82/169 (48%), Gaps = 17/169 (10%)
Query: 51 VAIKRL-AWTSGQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSLDS 109
VAIK L TS + E +EA ++A + ++ +LLG + +L+ + MP L
Sbjct: 53 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCL-L 110
Query: 110 SFSGTFKDLL--------CLHKYSRL------RVIHRDLKASNILLDDQLNTKISDFGMA 155
+ KD + C+ + R++HRDL A N+L+ + KI+DFG+A
Sbjct: 111 DYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 170
Query: 156 RIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKIV 204
++ G E + +M+LE + + ++DV+ +GV V +++
Sbjct: 171 KLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELM 219
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 96/213 (45%), Gaps = 30/213 (14%)
Query: 21 NSSLDWHMYIQQEQTRDRV-------ILVGKFPNEQEVAIKRLAWTSGQGRVEFQNEAKL 73
+SS DW + Q R+ + GK+ + V + + + Q F+NE +
Sbjct: 3 DSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGV 62
Query: 74 IAKLQYTNLVKLLG----------------CSIHGEERLLVYEFMPNKSLDSSFSGTFKD 117
+ K ++ N++ +G S++ ++ +F K +D + T +
Sbjct: 63 LRKTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIA-RQTAQG 121
Query: 118 LLCLHKYSRLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYM 177
+ LH S +IHRDLK++NI L + L KI DFG+A + ++ G+ +M
Sbjct: 122 MDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWM 178
Query: 178 SLEYTM---SGTVSIKTDVFGFGVLVLKIVCGK 207
+ E S ++DV+ FG+++ +++ G+
Sbjct: 179 APEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 211
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 96/214 (44%), Gaps = 30/214 (14%)
Query: 20 ENSSLDWHMYIQQEQTRDRV-------ILVGKFPNEQEVAIKRLAWTSGQGRVEFQNEAK 72
+SS DW + Q R+ + GK+ + V + + + Q F+NE
Sbjct: 25 RDSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVG 84
Query: 73 LIAKLQYTNLVKLLG----------------CSIHGEERLLVYEFMPNKSLDSSFSGTFK 116
++ K ++ N++ +G S++ ++ +F K +D + T +
Sbjct: 85 VLRKTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQ-TAQ 143
Query: 117 DLLCLHKYSRLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGY 176
+ LH S +IHRDLK++NI L + L KI DFG+A + ++ G+ +
Sbjct: 144 GMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILW 200
Query: 177 MSLEYTM---SGTVSIKTDVFGFGVLVLKIVCGK 207
M+ E S ++DV+ FG+++ +++ G+
Sbjct: 201 MAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 234
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 78/181 (43%), Gaps = 23/181 (12%)
Query: 48 EQEVAIKRLAWTSG-QGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKS 106
E VA+K + ++ + R+EF NEA ++ ++V+LLG G+ L+V E M +
Sbjct: 47 ETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGD 106
Query: 107 LDSSFSG--------------TFKDLLCLHK--------YSRLRVIHRDLKASNILLDDQ 144
L S T ++++ + + + +HRDL A N ++
Sbjct: 107 LKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHD 166
Query: 145 LNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKIV 204
KI DFGM R + + +M+ E G + +D++ FGV++ +I
Sbjct: 167 FTVKIGDFGMTRDIYETAYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEIT 226
Query: 205 C 205
Sbjct: 227 S 227
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 82/169 (48%), Gaps = 17/169 (10%)
Query: 51 VAIKRL-AWTSGQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSLDS 109
VAIK L TS + E +EA ++A + ++ +LLG + +L+ + MP L
Sbjct: 47 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCL-L 104
Query: 110 SFSGTFKDLL--------CLHKYSRL------RVIHRDLKASNILLDDQLNTKISDFGMA 155
+ KD + C+ + R++HRDL A N+L+ + KI+DFG+A
Sbjct: 105 DYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 164
Query: 156 RIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKIV 204
++ G E + +M+LE + + ++DV+ +GV V +++
Sbjct: 165 KLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELM 213
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 96/213 (45%), Gaps = 30/213 (14%)
Query: 21 NSSLDWHMYIQQEQTRDRV-------ILVGKFPNEQEVAIKRLAWTSGQGRVEFQNEAKL 73
+SS DW + Q R+ + GK+ + V + + + Q F+NE +
Sbjct: 3 DSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGV 62
Query: 74 IAKLQYTNLVKLLG----------------CSIHGEERLLVYEFMPNKSLDSSFSGTFKD 117
+ K ++ N++ +G S++ ++ +F K +D + T +
Sbjct: 63 LRKTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIA-RQTAQG 121
Query: 118 LLCLHKYSRLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYM 177
+ LH S +IHRDLK++NI L + L KI DFG+A + ++ G+ +M
Sbjct: 122 MDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWM 178
Query: 178 SLEYTM---SGTVSIKTDVFGFGVLVLKIVCGK 207
+ E S ++DV+ FG+++ +++ G+
Sbjct: 179 APEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 211
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 96/214 (44%), Gaps = 30/214 (14%)
Query: 20 ENSSLDWHMYIQQEQTRDRV-------ILVGKFPNEQEVAIKRLAWTSGQGRVEFQNEAK 72
+SS DW + Q R+ + GK+ + V + + + Q F+NE
Sbjct: 24 RDSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVG 83
Query: 73 LIAKLQYTNLVKLLG----------------CSIHGEERLLVYEFMPNKSLDSSFSGTFK 116
++ K ++ N++ +G S++ ++ +F K +D + T +
Sbjct: 84 VLRKTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIA-RQTAQ 142
Query: 117 DLLCLHKYSRLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGY 176
+ LH S +IHRDLK++NI L + L KI DFG+A + ++ G+ +
Sbjct: 143 GMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILW 199
Query: 177 MSLEYTM---SGTVSIKTDVFGFGVLVLKIVCGK 207
M+ E S ++DV+ FG+++ +++ G+
Sbjct: 200 MAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 233
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 59/105 (56%), Gaps = 15/105 (14%)
Query: 70 EAKLIAKLQYTNLVKLLGCSIHGEERL-LVYEFMPNKSLD----SSFSGTFKDLLCLHKY 124
E L+ +L + N+VKLL IH E +L LV+EF+ D S+ +G L+ + +
Sbjct: 54 EISLLKELNHPNIVKLLDV-IHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLF 112
Query: 125 SRL---------RVIHRDLKASNILLDDQLNTKISDFGMARIFGV 160
L RV+HRDLK N+L++ + K++DFG+AR FGV
Sbjct: 113 QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGV 157
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 55/104 (52%), Gaps = 7/104 (6%)
Query: 129 VIHRDLKASNILLDDQLNTKISDFGMAR-IFGVNESGANTNRIVGTYGYMSLEYTMSGTV 187
+IHRD+K +NI++ K+ DFG+AR I S T ++GT Y+S E +V
Sbjct: 137 IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSV 196
Query: 188 SIKTDVFGFGVLVLKIVCGKKNNKSYHTERPLNLVGIAWQLWNE 231
++DV+ G ++ +++ G+ + + P V +A+Q E
Sbjct: 197 DARSDVYSLGCVLYEVLTGE---PPFTGDSP---VSVAYQHVRE 234
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 87/186 (46%), Gaps = 20/186 (10%)
Query: 38 RVILVGKFPNEQEVAIK---RLAWTSGQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEE 94
+V L + +Q+VA+K R + + E + L++ +++KL +
Sbjct: 24 KVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTD 83
Query: 95 RLLVYEFMPNKSLDSSFSGT----------FKDLLCLHKY-SRLRVIHRDLKASNILLDD 143
++V E+ + D F+ ++C +Y R +++HRDLK N+LLDD
Sbjct: 84 IVMVIEYAGGELFDYIVEKKRMTEDEGRRFFQQIICAIEYCHRHKIVHRDLKPENLLLDD 143
Query: 144 QLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSI--KTDVFGFGVLVL 201
LN KI+DFG++ I G G+ Y + E ++G + + DV+ G+++
Sbjct: 144 NLNVKIADFGLSNIMT---DGNFLKTSCGSPNYAAPE-VINGKLYAGPEVDVWSCGIVLY 199
Query: 202 KIVCGK 207
++ G+
Sbjct: 200 VMLVGR 205
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 55/104 (52%), Gaps = 7/104 (6%)
Query: 129 VIHRDLKASNILLDDQLNTKISDFGMAR-IFGVNESGANTNRIVGTYGYMSLEYTMSGTV 187
+IHRD+K +NI++ K+ DFG+AR I S T ++GT Y+S E +V
Sbjct: 137 IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSV 196
Query: 188 SIKTDVFGFGVLVLKIVCGKKNNKSYHTERPLNLVGIAWQLWNE 231
++DV+ G ++ +++ G+ + + P V +A+Q E
Sbjct: 197 DARSDVYSLGCVLYEVLTGE---PPFTGDSP---VSVAYQHVRE 234
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 82/169 (48%), Gaps = 17/169 (10%)
Query: 51 VAIKRL-AWTSGQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSLDS 109
VAIK L TS + E +EA ++A + ++ +LLG + +L+ + MP L
Sbjct: 49 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCL-L 106
Query: 110 SFSGTFKDLL--------CLHKYSRL------RVIHRDLKASNILLDDQLNTKISDFGMA 155
+ KD + C+ + R++HRDL A N+L+ + KI+DFG+A
Sbjct: 107 DYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 166
Query: 156 RIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKIV 204
++ G E + +M+LE + + ++DV+ +GV V +++
Sbjct: 167 KLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELM 215
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 82/169 (48%), Gaps = 17/169 (10%)
Query: 51 VAIKRL-AWTSGQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSLDS 109
VAIK L TS + E +EA ++A + ++ +LLG + +L+ + MP L
Sbjct: 50 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCL-L 107
Query: 110 SFSGTFKDLL--------CLHKYSRL------RVIHRDLKASNILLDDQLNTKISDFGMA 155
+ KD + C+ + R++HRDL A N+L+ + KI+DFG+A
Sbjct: 108 DYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 167
Query: 156 RIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKIV 204
++ G E + +M+LE + + ++DV+ +GV V +++
Sbjct: 168 KLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELM 216
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 55/104 (52%), Gaps = 7/104 (6%)
Query: 129 VIHRDLKASNILLDDQLNTKISDFGMAR-IFGVNESGANTNRIVGTYGYMSLEYTMSGTV 187
+IHRD+K +NI++ K+ DFG+AR I S T ++GT Y+S E +V
Sbjct: 137 IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSV 196
Query: 188 SIKTDVFGFGVLVLKIVCGKKNNKSYHTERPLNLVGIAWQLWNE 231
++DV+ G ++ +++ G+ + + P V +A+Q E
Sbjct: 197 DARSDVYSLGCVLYEVLTGE---PPFTGDSP---VSVAYQHVRE 234
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 82/169 (48%), Gaps = 17/169 (10%)
Query: 51 VAIKRL-AWTSGQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSLDS 109
VAIK L TS + E +EA ++A + ++ +LLG + +L+ + MP L
Sbjct: 44 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCL-L 101
Query: 110 SFSGTFKDLL--------CLHKYSRL------RVIHRDLKASNILLDDQLNTKISDFGMA 155
+ KD + C+ + R++HRDL A N+L+ + KI+DFG+A
Sbjct: 102 DYVREHKDNIGSQYLLNWCVQIAEGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 161
Query: 156 RIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKIV 204
++ G E + +M+LE + + ++DV+ +GV V +++
Sbjct: 162 KLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELM 210
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 82/169 (48%), Gaps = 17/169 (10%)
Query: 51 VAIKRL-AWTSGQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSLDS 109
VAIK L TS + E +EA ++A + ++ +LLG + +L+ + MP L
Sbjct: 50 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCL-L 107
Query: 110 SFSGTFKDLL--------CLHKYSRL------RVIHRDLKASNILLDDQLNTKISDFGMA 155
+ KD + C+ + R++HRDL A N+L+ + KI+DFG+A
Sbjct: 108 DYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 167
Query: 156 RIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKIV 204
++ G E + +M+LE + + ++DV+ +GV V +++
Sbjct: 168 KLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELM 216
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 82/169 (48%), Gaps = 17/169 (10%)
Query: 51 VAIKRL-AWTSGQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSLDS 109
VAIK L TS + E +EA ++A + ++ +LLG + +L+ + MP L
Sbjct: 50 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCL-L 107
Query: 110 SFSGTFKDLL--------CLHKYSRL------RVIHRDLKASNILLDDQLNTKISDFGMA 155
+ KD + C+ + R++HRDL A N+L+ + KI+DFG+A
Sbjct: 108 DYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 167
Query: 156 RIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKIV 204
++ G E + +M+LE + + ++DV+ +GV V +++
Sbjct: 168 KLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELM 216
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 82/169 (48%), Gaps = 17/169 (10%)
Query: 51 VAIKRL-AWTSGQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSLDS 109
VAIK L TS + E +EA ++A + ++ +LLG + +L+ + MP L
Sbjct: 72 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCL-L 129
Query: 110 SFSGTFKDLL--------CLHKYSRL------RVIHRDLKASNILLDDQLNTKISDFGMA 155
+ KD + C+ + R++HRDL A N+L+ + KI+DFG+A
Sbjct: 130 DYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 189
Query: 156 RIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKIV 204
++ G E + +M+LE + + ++DV+ +GV V +++
Sbjct: 190 KLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELM 238
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 82/169 (48%), Gaps = 17/169 (10%)
Query: 51 VAIKRL-AWTSGQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSLDS 109
VAIK L TS + E +EA ++A + ++ +LLG + +L+ + MP L
Sbjct: 41 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCL-L 98
Query: 110 SFSGTFKDLL--------CLHKYSRL------RVIHRDLKASNILLDDQLNTKISDFGMA 155
+ KD + C+ + R++HRDL A N+L+ + KI+DFG+A
Sbjct: 99 DYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 158
Query: 156 RIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKIV 204
++ G E + +M+LE + + ++DV+ +GV V +++
Sbjct: 159 KLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELM 207
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 82/169 (48%), Gaps = 17/169 (10%)
Query: 51 VAIKRL-AWTSGQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSLDS 109
VAIK L TS + E +EA ++A + ++ +LLG + +L+ + MP L
Sbjct: 54 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCL-L 111
Query: 110 SFSGTFKDLL--------CLHKYSRL------RVIHRDLKASNILLDDQLNTKISDFGMA 155
+ KD + C+ + R++HRDL A N+L+ + KI+DFG+A
Sbjct: 112 DYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 171
Query: 156 RIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKIV 204
++ G E + +M+LE + + ++DV+ +GV V +++
Sbjct: 172 KLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELM 220
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 76/153 (49%), Gaps = 22/153 (14%)
Query: 67 FQNEAKLIAKLQYTNLVKLLGCSIHGEERL-LVYEFMPNKSLDSSFSGTFKDLL---CLH 122
F EA ++ +L+++NLV+LLG + + L +V E+M SL + +L CL
Sbjct: 46 FLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLL 105
Query: 123 KYSRLRV------------IHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRI 170
K+S L V +HRDL A N+L+ + K+SDFG+ + E+ + +
Sbjct: 106 KFS-LDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTK-----EASSTQDTG 159
Query: 171 VGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKI 203
+ + E S K+DV+ FG+L+ +I
Sbjct: 160 KLPVKWTAPEALREKKFSTKSDVWSFGILLWEI 192
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 82/169 (48%), Gaps = 17/169 (10%)
Query: 51 VAIKRL-AWTSGQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSLDS 109
VAIK L TS + E +EA ++A + ++ +LLG + +L+ + MP L
Sbjct: 47 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCL-L 104
Query: 110 SFSGTFKDLL--------CLHKYSRL------RVIHRDLKASNILLDDQLNTKISDFGMA 155
+ KD + C+ + R++HRDL A N+L+ + KI+DFG+A
Sbjct: 105 DYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 164
Query: 156 RIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKIV 204
++ G E + +M+LE + + ++DV+ +GV V +++
Sbjct: 165 KLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELM 213
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 82/169 (48%), Gaps = 17/169 (10%)
Query: 51 VAIKRL-AWTSGQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSLDS 109
VAIK L TS + E +EA ++A + ++ +LLG + +L+ + MP L
Sbjct: 54 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCL-L 111
Query: 110 SFSGTFKDLL--------CLHKYSRL------RVIHRDLKASNILLDDQLNTKISDFGMA 155
+ KD + C+ + R++HRDL A N+L+ + KI+DFG+A
Sbjct: 112 DYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 171
Query: 156 RIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKIV 204
++ G E + +M+LE + + ++DV+ +GV V +++
Sbjct: 172 KLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELM 220
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 76/153 (49%), Gaps = 22/153 (14%)
Query: 67 FQNEAKLIAKLQYTNLVKLLGCSIHGEERL-LVYEFMPNKSLDSSFSGTFKDLL---CLH 122
F EA ++ +L+++NLV+LLG + + L +V E+M SL + +L CL
Sbjct: 233 FLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLL 292
Query: 123 KYSRLRV------------IHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRI 170
K+S L V +HRDL A N+L+ + K+SDFG+ + E+ + +
Sbjct: 293 KFS-LDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTK-----EASSTQDTG 346
Query: 171 VGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKI 203
+ + E S K+DV+ FG+L+ +I
Sbjct: 347 KLPVKWTAPEALREKKFSTKSDVWSFGILLWEI 379
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 46/80 (57%), Gaps = 1/80 (1%)
Query: 129 VIHRDLKASNILLDDQLNTKISDFGMAR-IFGVNESGANTNRIVGTYGYMSLEYTMSGTV 187
+IHRD+K +NI++ K+ DFG+AR I S T ++GT Y+S E +V
Sbjct: 137 IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSV 196
Query: 188 SIKTDVFGFGVLVLKIVCGK 207
++DV+ G ++ +++ G+
Sbjct: 197 DARSDVYSLGCVLYEVLTGE 216
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 95/212 (44%), Gaps = 30/212 (14%)
Query: 22 SSLDWHMYIQQEQTRDRV-------ILVGKFPNEQEVAIKRLAWTSGQGRVEFQNEAKLI 74
SS DW + Q R+ + GK+ + V + + + Q F+NE ++
Sbjct: 1 SSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVL 60
Query: 75 AKLQYTNLVKLLG----------------CSIHGEERLLVYEFMPNKSLDSSFSGTFKDL 118
K ++ N++ +G S++ ++ +F K +D + T + +
Sbjct: 61 RKTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIA-RQTAQGM 119
Query: 119 LCLHKYSRLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMS 178
LH S +IHRDLK++NI L + L KI DFG+A + ++ G+ +M+
Sbjct: 120 DYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMA 176
Query: 179 LEYTM---SGTVSIKTDVFGFGVLVLKIVCGK 207
E S ++DV+ FG+++ +++ G+
Sbjct: 177 PEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 208
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 76/153 (49%), Gaps = 22/153 (14%)
Query: 67 FQNEAKLIAKLQYTNLVKLLGCSIHGEERL-LVYEFMPNKSLDSSFSGTFKDLL---CLH 122
F EA ++ +L+++NLV+LLG + + L +V E+M SL + +L CL
Sbjct: 61 FLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLL 120
Query: 123 KYSRLRV------------IHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRI 170
K+S L V +HRDL A N+L+ + K+SDFG+ + E+ + +
Sbjct: 121 KFS-LDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTK-----EASSTQDTG 174
Query: 171 VGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKI 203
+ + E S K+DV+ FG+L+ +I
Sbjct: 175 KLPVKWTAPEALREKKFSTKSDVWSFGILLWEI 207
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 55/104 (52%), Gaps = 7/104 (6%)
Query: 129 VIHRDLKASNILLDDQLNTKISDFGMAR-IFGVNESGANTNRIVGTYGYMSLEYTMSGTV 187
+IHRD+K +NI++ K+ DFG+AR I S T ++GT Y+S E +V
Sbjct: 154 IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSV 213
Query: 188 SIKTDVFGFGVLVLKIVCGKKNNKSYHTERPLNLVGIAWQLWNE 231
++DV+ G ++ +++ G+ + + P V +A+Q E
Sbjct: 214 DARSDVYSLGCVLYEVLTGE---PPFTGDSP---VSVAYQHVRE 251
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 82/169 (48%), Gaps = 17/169 (10%)
Query: 51 VAIKRL-AWTSGQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSLDS 109
VAIK L TS + E +EA ++A + ++ +LLG + +L++ + MP L
Sbjct: 51 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCL-L 108
Query: 110 SFSGTFKDLL--------CLHKYSRL------RVIHRDLKASNILLDDQLNTKISDFGMA 155
+ KD + C+ + R++HRDL A N+L+ + KI+DFG A
Sbjct: 109 DYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRA 168
Query: 156 RIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKIV 204
++ G E + +M+LE + + ++DV+ +GV V +++
Sbjct: 169 KLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELM 217
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 97/230 (42%), Gaps = 51/230 (22%)
Query: 50 EVAIKRL-AWTSGQGRVEFQNEAKLIAKL-QYTNLVKLLGCSIHGEERLLVYEFMPNKSL 107
+ AIKR+ + S +F E +++ KL + N++ LLG H L E+ P+ +L
Sbjct: 51 DAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNL 110
Query: 108 ------------DSSFS------GTFKDLLCLH----------KYSRLRVIHRDLKASNI 139
D +F+ T LH S+ + IHR+L A NI
Sbjct: 111 LDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRNLAARNI 170
Query: 140 LLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVL 199
L+ + KI+DFG++R V V SL Y++ T +DV+ +GVL
Sbjct: 171 LVGENYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTT---NSDVWSYGVL 227
Query: 200 VLKIV-------CG-------KKNNKSYHTERPLN----LVGIAWQLWNE 231
+ +IV CG +K + Y E+PLN + + Q W E
Sbjct: 228 LWEIVSLGGTPYCGMTCAELYEKLPQGYRLEKPLNCDDEVYDLMRQCWRE 277
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 86/179 (48%), Gaps = 25/179 (13%)
Query: 50 EVAIKRLAWTSG--QGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSL 107
+VA+K L T+ Q F+NE ++ K ++ N++ +G S + +V ++ SL
Sbjct: 32 DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST-APQLAIVTQWCEGSSL 90
Query: 108 -------DSSFS---------GTFKDLLCLHKYSRLRVIHRDLKASNILLDDQLNTKISD 151
++ F T + + LH S +IHRDLK++NI L + L KI D
Sbjct: 91 YHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGD 147
Query: 152 FGMARIFGVNESGANTNRIVGTYGYMSLEYTM---SGTVSIKTDVFGFGVLVLKIVCGK 207
FG+A + ++ G+ +M+ E S ++DV+ FG+++ +++ G+
Sbjct: 148 FGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 206
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 86/179 (48%), Gaps = 25/179 (13%)
Query: 50 EVAIKRLAWTSG--QGRVEFQNEAKLIAKLQYTNLVKLLG----------------CSIH 91
+VA+K L T+ Q F+NE ++ K ++ N++ +G S++
Sbjct: 32 DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQLAIVTQWCEGSSLY 91
Query: 92 GEERLLVYEFMPNKSLDSSFSGTFKDLLCLHKYSRLRVIHRDLKASNILLDDQLNTKISD 151
++ +F K +D + T + + LH S +IHRDLK++NI L + L KI D
Sbjct: 92 HHLHIIETKFEMIKLIDIA-RQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGD 147
Query: 152 FGMARIFGVNESGANTNRIVGTYGYMSLEYTM---SGTVSIKTDVFGFGVLVLKIVCGK 207
FG+A + ++ G+ +M+ E S ++DV+ FG+++ +++ G+
Sbjct: 148 FGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 206
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 82/169 (48%), Gaps = 17/169 (10%)
Query: 51 VAIKRL-AWTSGQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSLDS 109
VAIK L TS + E +EA ++A + ++ +LLG + +L++ + MP L
Sbjct: 49 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCL-L 106
Query: 110 SFSGTFKDLL--------CLHKYSRL------RVIHRDLKASNILLDDQLNTKISDFGMA 155
+ KD + C+ + R++HRDL A N+L+ + KI+DFG A
Sbjct: 107 DYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRA 166
Query: 156 RIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKIV 204
++ G E + +M+LE + + ++DV+ +GV V +++
Sbjct: 167 KLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELM 215
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 82/169 (48%), Gaps = 17/169 (10%)
Query: 51 VAIKRL-AWTSGQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSLDS 109
VAIK L TS + E +EA ++A + ++ +LLG + +L++ + MP L
Sbjct: 49 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCL-L 106
Query: 110 SFSGTFKDLL--------CLHKYSRL------RVIHRDLKASNILLDDQLNTKISDFGMA 155
+ KD + C+ + R++HRDL A N+L+ + KI+DFG A
Sbjct: 107 DYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRA 166
Query: 156 RIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKIV 204
++ G E + +M+LE + + ++DV+ +GV V +++
Sbjct: 167 KLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELM 215
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 79/181 (43%), Gaps = 23/181 (12%)
Query: 48 EQEVAIKRLAWTSG-QGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKS 106
E VA+K + ++ + R+EF NEA ++ ++V+LLG G+ L+V E M +
Sbjct: 47 ETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGD 106
Query: 107 LDSSFSG--------------TFKDLLCLHK--------YSRLRVIHRDLKASNILLDDQ 144
L S T ++++ + + + +HR+L A N ++
Sbjct: 107 LKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRNLAARNCMVAHD 166
Query: 145 LNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKIV 204
KI DFGM R + + + +M+ E G + +D++ FGV++ +I
Sbjct: 167 FTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEIT 226
Query: 205 C 205
Sbjct: 227 S 227
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 43/82 (52%), Gaps = 2/82 (2%)
Query: 126 RLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSG 185
R RVIHRDLK N+ L++ L KI DFG+A V G + GT Y++ E
Sbjct: 139 RNRVIHRDLKLGNLFLNEDLEVKIGDFGLAT--KVEYDGERKKTLCGTPNYIAPEVLSKK 196
Query: 186 TVSIKTDVFGFGVLVLKIVCGK 207
S + DV+ G ++ ++ GK
Sbjct: 197 GHSFEVDVWSIGCIMYTLLVGK 218
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 85/186 (45%), Gaps = 21/186 (11%)
Query: 38 RVILVGKFPNEQEVAIKRLAWTSGQGRV-EFQNEAKLIAKLQYTNLVKLLGCSIHGEERL 96
VIL ++ VAIK +A + +G+ +NE ++ K+++ N+V L G
Sbjct: 33 EVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLY 92
Query: 97 LVYEFMPNKSL-------------DSSFSGTFKDLLCLHKYSRLRVIHRDLKASNIL--- 140
L+ + + L D+S F+ L + L ++HRDLK N+L
Sbjct: 93 LIMQLVSGGELFDRIVEKGFYTERDAS-RLIFQVLDAVKYLHDLGIVHRDLKPENLLYYS 151
Query: 141 LDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLV 200
LD+ ISDFG++++ + G+ + GT GY++ E S D + GV+
Sbjct: 152 LDEDSKIMISDFGLSKM---EDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIA 208
Query: 201 LKIVCG 206
++CG
Sbjct: 209 YILLCG 214
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 43/82 (52%), Gaps = 2/82 (2%)
Query: 126 RLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSG 185
R RVIHRDLK N+ L++ L KI DFG+A V G + GT Y++ E
Sbjct: 135 RNRVIHRDLKLGNLFLNEDLEVKIGDFGLAT--KVEYDGERKKTLCGTPNYIAPEVLSKK 192
Query: 186 TVSIKTDVFGFGVLVLKIVCGK 207
S + DV+ G ++ ++ GK
Sbjct: 193 GHSFEVDVWSIGCIMYTLLVGK 214
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 43/82 (52%), Gaps = 2/82 (2%)
Query: 126 RLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSG 185
R RVIHRDLK N+ L++ L KI DFG+A V G + GT Y++ E
Sbjct: 135 RNRVIHRDLKLGNLFLNEDLEVKIGDFGLAT--KVEYDGERKKTLCGTPNYIAPEVLSKK 192
Query: 186 TVSIKTDVFGFGVLVLKIVCGK 207
S + DV+ G ++ ++ GK
Sbjct: 193 GHSFEVDVWSIGCIMYTLLVGK 214
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 79/181 (43%), Gaps = 23/181 (12%)
Query: 48 EQEVAIKRLAWTSG-QGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKS 106
E VA+K + ++ + R+EF NEA ++ ++V+LLG G+ L+V E M +
Sbjct: 48 ETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGD 107
Query: 107 LDSSFSG--------------TFKDLLCLHK--------YSRLRVIHRDLKASNILLDDQ 144
L S T ++++ + + + +HR+L A N ++
Sbjct: 108 LKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRNLAARNCMVAHD 167
Query: 145 LNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKIV 204
KI DFGM R + + + +M+ E G + +D++ FGV++ +I
Sbjct: 168 FTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEIT 227
Query: 205 C 205
Sbjct: 228 S 228
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 81/169 (47%), Gaps = 17/169 (10%)
Query: 51 VAIKRL-AWTSGQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSLDS 109
VAIK L TS + E +EA ++A + ++ +LLG + +L+ + MP L
Sbjct: 47 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCL-L 104
Query: 110 SFSGTFKDLL--------CLHKYSRL------RVIHRDLKASNILLDDQLNTKISDFGMA 155
+ KD + C+ + R++HRDL A N+L+ + KI+DFG A
Sbjct: 105 DYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRA 164
Query: 156 RIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKIV 204
++ G E + +M+LE + + ++DV+ +GV V +++
Sbjct: 165 KLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELM 213
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 58/113 (51%), Gaps = 9/113 (7%)
Query: 129 VIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVS 188
+++RDLK NILLD + KI+DFGM + + + A TN GT Y++ E + +
Sbjct: 140 IVYRDLKLDNILLDKDGHIKIADFGMCKENMLGD--AKTNEFCGTPDYIAPEILLGQKYN 197
Query: 189 IKTDVFGFGVLVLKIVCGKK------NNKSYHTERPLNLVGIAWQLWNEGKDL 235
D + FGVL+ +++ G+ + +H+ R N W L E KDL
Sbjct: 198 HSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYPRW-LEKEAKDL 249
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 85/186 (45%), Gaps = 21/186 (11%)
Query: 38 RVILVGKFPNEQEVAIKRLAWTSGQGRV-EFQNEAKLIAKLQYTNLVKLLGCSIHGEERL 96
VIL ++ VAIK +A + +G+ +NE ++ K+++ N+V L G
Sbjct: 33 EVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLY 92
Query: 97 LVYEFMPNKSL-------------DSSFSGTFKDLLCLHKYSRLRVIHRDLKASNIL--- 140
L+ + + L D+S F+ L + L ++HRDLK N+L
Sbjct: 93 LIMQLVSGGELFDRIVEKGFYTERDAS-RLIFQVLDAVKYLHDLGIVHRDLKPENLLYYS 151
Query: 141 LDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLV 200
LD+ ISDFG++++ + G+ + GT GY++ E S D + GV+
Sbjct: 152 LDEDSKIMISDFGLSKM---EDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIA 208
Query: 201 LKIVCG 206
++CG
Sbjct: 209 YILLCG 214
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 61/107 (57%), Gaps = 17/107 (15%)
Query: 69 NEAKLIAKLQYTNLVKLLGCSIHGEERL-LVYEFMPNKSLD-----SSFSGTFKDLLCLH 122
E L+ +L + N+VKLL IH E +L LV+EF+ ++ L S+ +G L+ +
Sbjct: 54 REISLLKELNHPNIVKLLDV-IHTENKLYLVFEFL-HQDLKTFMDASALTGIPLPLIKSY 111
Query: 123 KYSRL---------RVIHRDLKASNILLDDQLNTKISDFGMARIFGV 160
+ L RV+HRDLK N+L++ + K++DFG+AR FGV
Sbjct: 112 LFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGV 158
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 96/213 (45%), Gaps = 30/213 (14%)
Query: 21 NSSLDWHMYIQQEQTRDRV-------ILVGKFPNEQEVAIKRLAWTSGQGRVEFQNEAKL 73
+SS DW + Q R+ + GK+ + V + + + Q F+NE +
Sbjct: 2 DSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGV 61
Query: 74 IAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSL-------DSSFS---------GTFKD 117
+ K ++ N++ +G S + +V ++ SL ++ F T +
Sbjct: 62 LRKTRHVNILLFMGYSTK-PQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARG 120
Query: 118 LLCLHKYSRLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYM 177
+ LH S +IHRDLK++NI L + KI DFG+A + ++ G+ +M
Sbjct: 121 MDYLHAKS---IIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWM 177
Query: 178 SLEYTM---SGTVSIKTDVFGFGVLVLKIVCGK 207
+ E S S ++DV+ FG+++ +++ G+
Sbjct: 178 APEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQ 210
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 66/150 (44%), Gaps = 17/150 (11%)
Query: 69 NEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSLDSSFS--GTFKD--------- 117
NE +++ + + LVKL +V E+MP + S G F +
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQ 149
Query: 118 -LLCLHKYSRLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGY 176
+L L +I+RDLK N+L+D Q K++DFG A+ T + GT Y
Sbjct: 150 IVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAK-----RVKGRTWXLCGTPEY 204
Query: 177 MSLEYTMSGTVSIKTDVFGFGVLVLKIVCG 206
++ E +S + D + GVL+ ++ G
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 81/169 (47%), Gaps = 17/169 (10%)
Query: 51 VAIKRL-AWTSGQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSLDS 109
VAIK L TS + E +EA ++A + ++ +LLG + +L+ + MP L
Sbjct: 49 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCL-L 106
Query: 110 SFSGTFKDLL--------CLHKYSRL------RVIHRDLKASNILLDDQLNTKISDFGMA 155
+ KD + C+ + R++HRDL A N+L+ + KI+DFG A
Sbjct: 107 DYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRA 166
Query: 156 RIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKIV 204
++ G E + +M+LE + + ++DV+ +GV V +++
Sbjct: 167 KLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELM 215
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 85/186 (45%), Gaps = 21/186 (11%)
Query: 38 RVILVGKFPNEQEVAIKRLAWTSGQGRV-EFQNEAKLIAKLQYTNLVKLLGCSIHGEERL 96
VIL ++ VAIK +A + +G+ +NE ++ K+++ N+V L G
Sbjct: 33 EVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLY 92
Query: 97 LVYEFMPNKSL-------------DSSFSGTFKDLLCLHKYSRLRVIHRDLKASNIL--- 140
L+ + + L D+S F+ L + L ++HRDLK N+L
Sbjct: 93 LIMQLVSGGELFDRIVEKGFYTERDAS-RLIFQVLDAVKYLHDLGIVHRDLKPENLLYYS 151
Query: 141 LDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLV 200
LD+ ISDFG++++ + G+ + GT GY++ E S D + GV+
Sbjct: 152 LDEDSKIMISDFGLSKM---EDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIA 208
Query: 201 LKIVCG 206
++CG
Sbjct: 209 YILLCG 214
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 85/186 (45%), Gaps = 21/186 (11%)
Query: 38 RVILVGKFPNEQEVAIKRLAWTSGQGRV-EFQNEAKLIAKLQYTNLVKLLGCSIHGEERL 96
VIL ++ VAIK +A + +G+ +NE ++ K+++ N+V L G
Sbjct: 33 EVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLY 92
Query: 97 LVYEFMPNKSL-------------DSSFSGTFKDLLCLHKYSRLRVIHRDLKASNIL--- 140
L+ + + L D+S F+ L + L ++HRDLK N+L
Sbjct: 93 LIMQLVSGGELFDRIVEKGFYTERDAS-RLIFQVLDAVKYLHDLGIVHRDLKPENLLYYS 151
Query: 141 LDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLV 200
LD+ ISDFG++++ + G+ + GT GY++ E S D + GV+
Sbjct: 152 LDEDSKIMISDFGLSKM---EDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIA 208
Query: 201 LKIVCG 206
++CG
Sbjct: 209 YILLCG 214
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 66/150 (44%), Gaps = 17/150 (11%)
Query: 69 NEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSLDSSFS--GTFKD--------- 117
NE +++ + + LVKL +V E+MP + S G F +
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQ 149
Query: 118 -LLCLHKYSRLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGY 176
+L L +I+RDLK N+L+D Q K++DFG A+ T + GT Y
Sbjct: 150 IVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAK-----RVKGRTWXLCGTPEY 204
Query: 177 MSLEYTMSGTVSIKTDVFGFGVLVLKIVCG 206
++ E +S + D + GVL+ ++ G
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 76/176 (43%), Gaps = 25/176 (14%)
Query: 51 VAIKRLA---WTSGQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSL 107
VA+K++ + R + E L+ +L + N++K I E +V E L
Sbjct: 60 VALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLELADAGDL 119
Query: 108 DSSFSGTFKDL---------------LCL---HKYSRLRVIHRDLKASNILLDDQLNTKI 149
S FK LC H +SR RV+HRD+K +N+ + K+
Sbjct: 120 -SRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSR-RVMHRDIKPANVFITATGVVKL 177
Query: 150 SDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKIVC 205
D G+ R F + A++ +VGT YMS E + K+D++ G L+ ++
Sbjct: 178 GDLGLGRFFSSKTTAAHS--LVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAA 231
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 43/82 (52%), Gaps = 2/82 (2%)
Query: 126 RLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSG 185
R RVIHRDLK N+ L++ L KI DFG+A V G + GT Y++ E
Sbjct: 157 RNRVIHRDLKLGNLFLNEDLEVKIGDFGLAT--KVEYDGERKKVLCGTPNYIAPEVLSKK 214
Query: 186 TVSIKTDVFGFGVLVLKIVCGK 207
S + DV+ G ++ ++ GK
Sbjct: 215 GHSFEVDVWSIGCIMYTLLVGK 236
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 81/169 (47%), Gaps = 17/169 (10%)
Query: 51 VAIKRL-AWTSGQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSLDS 109
VAIK L TS + E +EA ++A + ++ +LLG + +L+ + MP L
Sbjct: 54 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCL-L 111
Query: 110 SFSGTFKDLL--------CLHKYSRL------RVIHRDLKASNILLDDQLNTKISDFGMA 155
+ KD + C+ + R++HRDL A N+L+ + KI+DFG A
Sbjct: 112 DYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRA 171
Query: 156 RIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKIV 204
++ G E + +M+LE + + ++DV+ +GV V +++
Sbjct: 172 KLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELM 220
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 58/113 (51%), Gaps = 9/113 (7%)
Query: 129 VIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVS 188
+++RDLK NILLD + KI+DFGM + + + A TN GT Y++ E + +
Sbjct: 139 IVYRDLKLDNILLDKDGHIKIADFGMCKENMLGD--AKTNXFCGTPDYIAPEILLGQKYN 196
Query: 189 IKTDVFGFGVLVLKIVCGKK------NNKSYHTERPLNLVGIAWQLWNEGKDL 235
D + FGVL+ +++ G+ + +H+ R N W L E KDL
Sbjct: 197 HSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYPRW-LEKEAKDL 248
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 43/82 (52%), Gaps = 2/82 (2%)
Query: 126 RLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSG 185
R RVIHRDLK N+ L++ L KI DFG+A V G + GT Y++ E
Sbjct: 159 RNRVIHRDLKLGNLFLNEDLEVKIGDFGLAT--KVEYDGERKKVLCGTPNYIAPEVLSKK 216
Query: 186 TVSIKTDVFGFGVLVLKIVCGK 207
S + DV+ G ++ ++ GK
Sbjct: 217 GHSFEVDVWSIGCIMYTLLVGK 238
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 43/82 (52%), Gaps = 2/82 (2%)
Query: 126 RLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSG 185
R RVIHRDLK N+ L++ L KI DFG+A V G + GT Y++ E
Sbjct: 133 RNRVIHRDLKLGNLFLNEDLEVKIGDFGLAT--KVEYDGERKKVLCGTPNYIAPEVLSKK 190
Query: 186 TVSIKTDVFGFGVLVLKIVCGK 207
S + DV+ G ++ ++ GK
Sbjct: 191 GHSFEVDVWSIGCIMYTLLVGK 212
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 88/188 (46%), Gaps = 31/188 (16%)
Query: 38 RVILVGKFPNEQEVAIK-----RLAWTSGQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHG 92
R IL G+ EVAIK +L TS Q + E +++ L + N+VKL I
Sbjct: 32 RHILTGR-----EVAIKIIDKTQLNPTSLQ---KLFREVRIMKILNHPNIVKLFEV-IET 82
Query: 93 EERL-LVYEFMPNKSL-----------DSSFSGTFKDLLCLHKY-SRLRVIHRDLKASNI 139
E+ L L+ E+ + + F+ ++ +Y + R++HRDLKA N+
Sbjct: 83 EKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENL 142
Query: 140 LLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLE-YTMSGTVSIKTDVFGFGV 198
LLD +N KI+DFG + F V G + G+ Y + E + + DV+ GV
Sbjct: 143 LLDADMNIKIADFGFSNEFTV---GGKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGV 199
Query: 199 LVLKIVCG 206
++ +V G
Sbjct: 200 ILYTLVSG 207
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 70/158 (44%), Gaps = 21/158 (13%)
Query: 66 EFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSLD----------------- 108
EF E ++ +L++ N+V +G +V E++ SL
Sbjct: 80 EFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRR 139
Query: 109 -SSFSGTFKDLLCLHKYSRLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANT 167
S K + LH + ++HRDLK+ N+L+D + K+ DFG++R+ +
Sbjct: 140 LSMAYDVAKGMNYLHNRNP-PIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKA--SXFLXS 196
Query: 168 NRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKIVC 205
GT +M+ E + K+DV+ FGV++ ++
Sbjct: 197 KXAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELAT 234
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 41/79 (51%), Gaps = 2/79 (2%)
Query: 129 VIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVS 188
+I+RDLK N+LLDD N +ISD G+A ++ T GT G+M+ E +
Sbjct: 310 IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQT--KTKGYAGTPGFMAPELLLGEEYD 367
Query: 189 IKTDVFGFGVLVLKIVCGK 207
D F GV + +++ +
Sbjct: 368 FSVDYFALGVTLYEMIAAR 386
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 41/79 (51%), Gaps = 2/79 (2%)
Query: 129 VIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVS 188
+I+RDLK N+LLDD N +ISD G+A ++ T GT G+M+ E +
Sbjct: 310 IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQT--KTKGYAGTPGFMAPELLLGEEYD 367
Query: 189 IKTDVFGFGVLVLKIVCGK 207
D F GV + +++ +
Sbjct: 368 FSVDYFALGVTLYEMIAAR 386
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 41/79 (51%), Gaps = 2/79 (2%)
Query: 129 VIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVS 188
+I+RDLK N+LLDD N +ISD G+A ++ T GT G+M+ E +
Sbjct: 310 IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQT--KTKGYAGTPGFMAPELLLGEEYD 367
Query: 189 IKTDVFGFGVLVLKIVCGK 207
D F GV + +++ +
Sbjct: 368 FSVDYFALGVTLYEMIAAR 386
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 41/79 (51%), Gaps = 2/79 (2%)
Query: 129 VIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVS 188
+I+RDLK N+LLDD N +ISD G+A ++ T GT G+M+ E +
Sbjct: 310 IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQT--KTKGYAGTPGFMAPELLLGEEYD 367
Query: 189 IKTDVFGFGVLVLKIVCGK 207
D F GV + +++ +
Sbjct: 368 FSVDYFALGVTLYEMIAAR 386
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 87/188 (46%), Gaps = 31/188 (16%)
Query: 38 RVILVGKFPNEQEVAIK-----RLAWTSGQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHG 92
R IL G+ EVAIK +L TS Q + E +++ L + N+VKL I
Sbjct: 35 RHILTGR-----EVAIKIIDKTQLNPTSLQ---KLFREVRIMKILNHPNIVKLFEV-IET 85
Query: 93 EERL-LVYEFMPNKSL-----------DSSFSGTFKDLLCLHKY-SRLRVIHRDLKASNI 139
E+ L L+ E+ + + F+ ++ +Y + R++HRDLKA N+
Sbjct: 86 EKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENL 145
Query: 140 LLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLE-YTMSGTVSIKTDVFGFGV 198
LLD +N KI+DFG + F V G + G Y + E + + DV+ GV
Sbjct: 146 LLDADMNIKIADFGFSNEFTV---GGKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGV 202
Query: 199 LVLKIVCG 206
++ +V G
Sbjct: 203 ILYTLVSG 210
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 77/160 (48%), Gaps = 16/160 (10%)
Query: 59 TSGQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSLDSSFSGTFKDL 118
TS + E +EA ++A + ++ +LLG + +L+ + MP L + KD
Sbjct: 90 TSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCL-LDYVREHKDN 147
Query: 119 L--------CLHKYSRL------RVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESG 164
+ C+ + R++HRDL A N+L+ + KI+DFG+A++ G E
Sbjct: 148 IGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE 207
Query: 165 ANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKIV 204
+ +M+LE + + ++DV+ +GV V +++
Sbjct: 208 YHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELM 247
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 80/190 (42%), Gaps = 29/190 (15%)
Query: 42 VGKFPNEQEVAIKRL--AWTSGQGRVEFQNEAKLIAKLQYTNLVKLLG-CSIHGEERLLV 98
+ K + VA+K L T + R LI + N+V LLG C+ G +++
Sbjct: 51 IDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVI 110
Query: 99 YEF-----------------MPNKSLDSSFSGTFKDLLC--------LHKYSRLRVIHRD 133
EF +P K L F T + L+C + + + IHRD
Sbjct: 111 VEFCKFGNLSTYLRSKRNEFVPYKDLYKDFL-TLEHLICYSFQVAKGMEFLASRKXIHRD 169
Query: 134 LKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDV 193
L A NILL ++ KI DFG+AR + +M+ E +I++DV
Sbjct: 170 LAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDV 229
Query: 194 FGFGVLVLKI 203
+ FGVL+ +I
Sbjct: 230 WSFGVLLWEI 239
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 43/80 (53%), Gaps = 2/80 (2%)
Query: 128 RVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTV 187
RVIHRDLK N+ L+D ++ KI DFG+A + G + GT Y++ E
Sbjct: 162 RVIHRDLKLGNLFLNDDMDVKIGDFGLAT--KIEFDGERKKXLCGTPNYIAPEVLCKKGH 219
Query: 188 SIKTDVFGFGVLVLKIVCGK 207
S + D++ G ++ ++ GK
Sbjct: 220 SFEVDIWSLGCILYTLLVGK 239
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 43/80 (53%), Gaps = 2/80 (2%)
Query: 128 RVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTV 187
RVIHRDLK N+ L+D ++ KI DFG+A + G + GT Y++ E
Sbjct: 162 RVIHRDLKLGNLFLNDDMDVKIGDFGLAT--KIEFDGERKKTLCGTPNYIAPEVLCKKGH 219
Query: 188 SIKTDVFGFGVLVLKIVCGK 207
S + D++ G ++ ++ GK
Sbjct: 220 SFEVDIWSLGCILYTLLVGK 239
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 95/214 (44%), Gaps = 30/214 (14%)
Query: 20 ENSSLDWHMYIQQEQTRDRV-------ILVGKFPNEQEVAIKRLAWTSGQGRVEFQNEAK 72
+SS DW + Q R+ + GK+ + V + + + Q F+NE
Sbjct: 17 RDSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVG 76
Query: 73 LIAKLQYTNLVKLLG----------------CSIHGEERLLVYEFMPNKSLDSSFSGTFK 116
++ K ++ N++ +G S++ ++ +F K +D + T +
Sbjct: 77 VLRKTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIA-RQTAQ 135
Query: 117 DLLCLHKYSRLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGY 176
+ LH S +IHRDLK++NI L + L KI DFG+A ++ G+ +
Sbjct: 136 GMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILW 192
Query: 177 MSLEYTM---SGTVSIKTDVFGFGVLVLKIVCGK 207
M+ E S ++DV+ FG+++ +++ G+
Sbjct: 193 MAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 226
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 54/101 (53%), Gaps = 5/101 (4%)
Query: 125 SRLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVG--TYGYMSLEYT 182
+ ++++HRDL A NIL+ + KISDFG++R V E + R G +M++E
Sbjct: 167 AEMKLVHRDLAARNILVAEGRKMKISDFGLSR--DVYEEDSXVKRSQGRIPVKWMAIESL 224
Query: 183 MSGTVSIKTDVFGFGVLVLKIVC-GKKNNKSYHTERPLNLV 222
+ ++DV+ FGVL+ +IV G ER NL+
Sbjct: 225 FDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLL 265
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 49/93 (52%), Gaps = 2/93 (2%)
Query: 130 IHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSI 189
IHRD+KA+N+LL + K++DFG+A + ++ N VGT +M+ E
Sbjct: 126 IHRDIKAANVLLSEHGEVKLADFGVAG--QLTDTQIKRNXFVGTPFWMAPEVIKQSAYDS 183
Query: 190 KTDVFGFGVLVLKIVCGKKNNKSYHTERPLNLV 222
K D++ G+ +++ G+ + H + L L+
Sbjct: 184 KADIWSLGITAIELARGEPPHSELHPMKVLFLI 216
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 95/213 (44%), Gaps = 30/213 (14%)
Query: 21 NSSLDWHMYIQQEQTRDRV-------ILVGKFPNEQEVAIKRLAWTSGQGRVEFQNEAKL 73
+SS DW + Q R+ + GK+ + V + + + Q F+NE +
Sbjct: 26 DSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGV 85
Query: 74 IAKLQYTNLVKLLG----------------CSIHGEERLLVYEFMPNKSLDSSFSGTFKD 117
+ K ++ N++ +G S++ ++ +F K +D + T +
Sbjct: 86 LRKTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQ-TAQG 144
Query: 118 LLCLHKYSRLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYM 177
+ LH S +IHRDLK++NI L + L KI DFG+A ++ G+ +M
Sbjct: 145 MDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWM 201
Query: 178 SLEYTM---SGTVSIKTDVFGFGVLVLKIVCGK 207
+ E S ++DV+ FG+++ +++ G+
Sbjct: 202 APEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 234
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 50/95 (52%), Gaps = 2/95 (2%)
Query: 128 RVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTV 187
+ IHRD+KA+N+LL + K++DFG+A + ++ N VGT +M+ E
Sbjct: 139 KKIHRDIKAANVLLSEHGEVKLADFGVAG--QLTDTQIKRNXFVGTPFWMAPEVIKQSAY 196
Query: 188 SIKTDVFGFGVLVLKIVCGKKNNKSYHTERPLNLV 222
K D++ G+ +++ G+ + H + L L+
Sbjct: 197 DSKADIWSLGITAIELARGEPPHSELHPMKVLFLI 231
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 72/158 (45%), Gaps = 21/158 (13%)
Query: 66 EFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSLD----------------- 108
EF E ++ +L++ N+V +G +V E++ SL
Sbjct: 80 EFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRR 139
Query: 109 -SSFSGTFKDLLCLHKYSRLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANT 167
S K + LH + ++HR+LK+ N+L+D + K+ DFG++R+ + ++
Sbjct: 140 LSMAYDVAKGMNYLHNRNP-PIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKA--STFLSS 196
Query: 168 NRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKIVC 205
GT +M+ E + K+DV+ FGV++ ++
Sbjct: 197 KSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELAT 234
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 43/80 (53%), Gaps = 2/80 (2%)
Query: 128 RVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTV 187
RVIHRDLK N+ L+D ++ KI DFG+A + G + GT Y++ E
Sbjct: 146 RVIHRDLKLGNLFLNDDMDVKIGDFGLAT--KIEFDGERKKDLCGTPNYIAPEVLCKKGH 203
Query: 188 SIKTDVFGFGVLVLKIVCGK 207
S + D++ G ++ ++ GK
Sbjct: 204 SFEVDIWSLGCILYTLLVGK 223
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 80/200 (40%), Gaps = 37/200 (18%)
Query: 66 EFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSL--------DSSFSGTFKD 117
EF EA ++ ++++ NLV+LLG ++ EFM +L S
Sbjct: 53 EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLL 112
Query: 118 LLCLHKYSRLR------VIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIV 171
+ S + IHRDL A N L+ + K++DFG++R+ + A+
Sbjct: 113 YMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKF 172
Query: 172 GTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKIVCGKKN--------------NKSYHTER 217
+ + E SIK+DV+ FGVL+ +I + K Y ER
Sbjct: 173 PI-KWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLEKDYRMER 231
Query: 218 P-------LNLVGIAWQLWN 230
P L+ WQ WN
Sbjct: 232 PEGCPEKVYELMRACWQ-WN 250
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 49/93 (52%), Gaps = 2/93 (2%)
Query: 130 IHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSI 189
IHRD+KA+N+LL + K++DFG+A + ++ N VGT +M+ E
Sbjct: 126 IHRDIKAANVLLSEHGEVKLADFGVAG--QLTDTQIKRNTFVGTPFWMAPEVIKQSAYDS 183
Query: 190 KTDVFGFGVLVLKIVCGKKNNKSYHTERPLNLV 222
K D++ G+ +++ G+ + H + L L+
Sbjct: 184 KADIWSLGITAIELARGEPPHSELHPMKVLFLI 216
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 84/200 (42%), Gaps = 37/200 (18%)
Query: 66 EFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSLDSSFSGTFKD----LLCL 121
EF EA ++ ++++ NLV+LLG ++ EFM +L + ++ L
Sbjct: 60 EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLL 119
Query: 122 HKYSRLR----------VIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIV 171
+ +++ IHRDL A N L+ + K++DFG++R+ + A+
Sbjct: 120 YMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKF 179
Query: 172 GTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKIVCGKKN--------------NKSYHTER 217
+ + E SIK+DV+ FGVL+ +I + K Y ER
Sbjct: 180 PI-KWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMER 238
Query: 218 P-------LNLVGIAWQLWN 230
P L+ WQ WN
Sbjct: 239 PEGCPEKVYELMRACWQ-WN 257
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 43/80 (53%), Gaps = 2/80 (2%)
Query: 128 RVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTV 187
RVIHRDLK N+ L+D ++ KI DFG+A + G + GT Y++ E
Sbjct: 162 RVIHRDLKLGNLFLNDDMDVKIGDFGLAT--KIEFDGERKKDLCGTPNYIAPEVLCKKGH 219
Query: 188 SIKTDVFGFGVLVLKIVCGK 207
S + D++ G ++ ++ GK
Sbjct: 220 SFEVDIWSLGCILYTLLVGK 239
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 80/152 (52%), Gaps = 19/152 (12%)
Query: 70 EAKLIAKLQYTNLVKLLGCSIHGEERL-LVYEFMPN---KSLDSSFSG----TFKDLL-- 119
E ++ +L+++N+VKL IH ++RL LV+E + K LD G T K L
Sbjct: 50 EISILKELKHSNIVKLYDV-IHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQ 108
Query: 120 ----CLHKYSRLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYG 175
+ + R RV+HRDLK N+L++ + KI+DFG+AR FG+ T+ IV T
Sbjct: 109 LLNGIAYCHDR-RVLHRDLKPQNLLINREGELKIADFGLARAFGI-PVRKYTHEIV-TLW 165
Query: 176 YMSLEYTM-SGTVSIKTDVFGFGVLVLKIVCG 206
Y + + M S S D++ G + ++V G
Sbjct: 166 YRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 84/200 (42%), Gaps = 37/200 (18%)
Query: 66 EFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSLDSSFSGTFKD----LLCL 121
EF EA ++ ++++ NLV+LLG ++ EFM +L + ++ L
Sbjct: 60 EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLL 119
Query: 122 HKYSRLR----------VIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIV 171
+ +++ IHRDL A N L+ + K++DFG++R+ + A+
Sbjct: 120 YMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF 179
Query: 172 GTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKIVCGKKN--------------NKSYHTER 217
+ + E SIK+DV+ FGVL+ +I + K Y ER
Sbjct: 180 PI-KWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMER 238
Query: 218 P-------LNLVGIAWQLWN 230
P L+ WQ WN
Sbjct: 239 PEGCPEKVYELMRACWQ-WN 257
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 84/200 (42%), Gaps = 37/200 (18%)
Query: 66 EFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSLDSSFSGTFKD----LLCL 121
EF EA ++ ++++ NLV+LLG ++ EFM +L + ++ L
Sbjct: 56 EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLL 115
Query: 122 HKYSRLR----------VIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIV 171
+ +++ IHRDL A N L+ + K++DFG++R+ + A+
Sbjct: 116 YMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKF 175
Query: 172 GTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKIVCGKKN--------------NKSYHTER 217
+ + E SIK+DV+ FGVL+ +I + K Y ER
Sbjct: 176 PI-KWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMER 234
Query: 218 P-------LNLVGIAWQLWN 230
P L+ WQ WN
Sbjct: 235 PEGCPEKVYELMRACWQ-WN 253
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 54/101 (53%), Gaps = 5/101 (4%)
Query: 125 SRLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVG--TYGYMSLEYT 182
+ ++++HRDL A NIL+ + KISDFG++R V E + R G +M++E
Sbjct: 167 AEMKLVHRDLAARNILVAEGRKMKISDFGLSR--DVYEEDSYVKRSQGRIPVKWMAIESL 224
Query: 183 MSGTVSIKTDVFGFGVLVLKIVC-GKKNNKSYHTERPLNLV 222
+ ++DV+ FGVL+ +IV G ER NL+
Sbjct: 225 FDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLL 265
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 89/214 (41%), Gaps = 31/214 (14%)
Query: 37 DRVILVGKF------------PNEQEVAIKRLAWTSGQGRVE-FQNEAKLIAKLQYTNLV 83
DRVI G F N + AIK L+ + +VE F E L+ L + N++
Sbjct: 26 DRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVL 85
Query: 84 KLLGCSI--------------HGEERLLVYEFMPNKSLDSSFSGTFKDLLCLHKYSRLRV 129
L+G + HG+ + N ++ S + + + +
Sbjct: 86 ALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAEQKF 145
Query: 130 IHRDLKASNILLDDQLNTKISDFGMAR-IFGVNESGANTNRIVG-TYGYMSLEYTMSGTV 187
+HRDL A N +LD+ K++DFG+AR I +R + +LE +
Sbjct: 146 VHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTALESLQTYRF 205
Query: 188 SIKTDVFGFGVLVLKIVCGKKNNKSYHTERPLNL 221
+ K+DV+ FGVL+ +++ + Y P +L
Sbjct: 206 TTKSDVWSFGVLLWELLT--RGAPPYRHIDPFDL 237
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 80/200 (40%), Gaps = 37/200 (18%)
Query: 66 EFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSL--------DSSFSGTFKD 117
EF EA ++ ++++ NLV+LLG ++ EFM +L S
Sbjct: 53 EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLL 112
Query: 118 LLCLHKYSRLR------VIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIV 171
+ S + IHRDL A N L+ + K++DFG++R+ + A+
Sbjct: 113 YMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKF 172
Query: 172 GTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKIVCGKKN--------------NKSYHTER 217
+ + E SIK+DV+ FGVL+ +I + K Y ER
Sbjct: 173 PI-KWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLEKDYRMER 231
Query: 218 P-------LNLVGIAWQLWN 230
P L+ WQ WN
Sbjct: 232 PEGCPEKVYELMRACWQ-WN 250
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 94/213 (44%), Gaps = 40/213 (18%)
Query: 46 PNEQEVAIKRLAWTSGQGRV-EFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPN 104
P +++VAIKR+ Q + E E + +++ + N+V + +E LV + +
Sbjct: 38 PKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSG 97
Query: 105 KSL-------------------DSSFSGTFKDLL----CLHKYSRLRVIHRDLKASNILL 141
S+ +S+ + +++L LHK + IHRD+KA NILL
Sbjct: 98 GSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQ---IHRDVKAGNILL 154
Query: 142 DDQLNTKISDFGMARIFGVNESGANTNR------IVGTYGYMSLEYT-MSGTVSIKTDVF 194
+ + +I+DFG++ +G + R VGT +M+ E K D++
Sbjct: 155 GEDGSVQIADFGVSAFLA---TGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIW 211
Query: 195 GFGVLVLKIVCGKKNNKSYHTERPLNLVGIAWQ 227
FG+ +++ G YH P+ ++ + Q
Sbjct: 212 SFGITAIELATGA---APYHKYPPMKVLMLTLQ 241
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 60/105 (57%), Gaps = 15/105 (14%)
Query: 70 EAKLIAKLQYTNLVKLLGCSIHGEERL-LVYEFMPN---KSLDSS-FSGTFKDLLCLHKY 124
E L+ +L + N+VKLL IH E +L LV+E + K +D+S +G L+ + +
Sbjct: 55 EISLLKELNHPNIVKLLDV-IHTENKLYLVFEHVDQDLKKFMDASALTGIPLPLIKSYLF 113
Query: 125 SRL---------RVIHRDLKASNILLDDQLNTKISDFGMARIFGV 160
L RV+HRDLK N+L++ + K++DFG+AR FGV
Sbjct: 114 QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGV 158
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 84/200 (42%), Gaps = 37/200 (18%)
Query: 66 EFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSLDSSFSGTFKD----LLCL 121
EF EA ++ ++++ NLV+LLG ++ EFM +L + ++ L
Sbjct: 60 EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLL 119
Query: 122 HKYSRLR----------VIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIV 171
+ +++ IHRDL A N L+ + K++DFG++R+ + A+
Sbjct: 120 YMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF 179
Query: 172 GTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKIVCGKKN--------------NKSYHTER 217
+ + E SIK+DV+ FGVL+ +I + K Y ER
Sbjct: 180 PI-KWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMER 238
Query: 218 P-------LNLVGIAWQLWN 230
P L+ WQ WN
Sbjct: 239 PEGCPEKVYELMRACWQ-WN 257
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 84/200 (42%), Gaps = 37/200 (18%)
Query: 66 EFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSLDSSFSGTFKD----LLCL 121
EF EA ++ ++++ NLV+LLG ++ EFM +L + ++ L
Sbjct: 59 EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLL 118
Query: 122 HKYSRLR----------VIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIV 171
+ +++ IHRDL A N L+ + K++DFG++R+ + A+
Sbjct: 119 YMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF 178
Query: 172 GTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKIVCGKKN--------------NKSYHTER 217
+ + E SIK+DV+ FGVL+ +I + K Y ER
Sbjct: 179 PI-KWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMER 237
Query: 218 P-------LNLVGIAWQLWN 230
P L+ WQ WN
Sbjct: 238 PEGCPEKVYELMRACWQ-WN 256
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 94/213 (44%), Gaps = 40/213 (18%)
Query: 46 PNEQEVAIKRLAWTSGQGRV-EFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPN 104
P +++VAIKR+ Q + E E + +++ + N+V + +E LV + +
Sbjct: 33 PKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSG 92
Query: 105 KSL-------------------DSSFSGTFKDLL----CLHKYSRLRVIHRDLKASNILL 141
S+ +S+ + +++L LHK + IHRD+KA NILL
Sbjct: 93 GSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQ---IHRDVKAGNILL 149
Query: 142 DDQLNTKISDFGMARIFGVNESGANTNR------IVGTYGYMSLEYT-MSGTVSIKTDVF 194
+ + +I+DFG++ +G + R VGT +M+ E K D++
Sbjct: 150 GEDGSVQIADFGVSAFLA---TGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIW 206
Query: 195 GFGVLVLKIVCGKKNNKSYHTERPLNLVGIAWQ 227
FG+ +++ G YH P+ ++ + Q
Sbjct: 207 SFGITAIELATGA---APYHKYPPMKVLMLTLQ 236
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 84/200 (42%), Gaps = 37/200 (18%)
Query: 66 EFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSLDSSFSGTFKD----LLCL 121
EF EA ++ ++++ NLV+LLG ++ EFM +L + ++ L
Sbjct: 55 EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLL 114
Query: 122 HKYSRLR----------VIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIV 171
+ +++ IHRDL A N L+ + K++DFG++R+ + A+
Sbjct: 115 YMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF 174
Query: 172 GTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKIVCGKKN--------------NKSYHTER 217
+ + E SIK+DV+ FGVL+ +I + K Y ER
Sbjct: 175 PI-KWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMER 233
Query: 218 P-------LNLVGIAWQLWN 230
P L+ WQ WN
Sbjct: 234 PEGCPEKVYELMRACWQ-WN 252
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/152 (32%), Positives = 80/152 (52%), Gaps = 19/152 (12%)
Query: 70 EAKLIAKLQYTNLVKLLGCSIHGEERL-LVYEFMPN---KSLDSSFSG----TFKDLL-- 119
E ++ +L+++N+VKL IH ++RL LV+E + K LD G T K L
Sbjct: 50 EISILKELKHSNIVKLYDV-IHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQ 108
Query: 120 ----CLHKYSRLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYG 175
+ + R RV+HRDLK N+L++ + KI+DFG+AR FG+ T+ +V T
Sbjct: 109 LLNGIAYCHDR-RVLHRDLKPQNLLINREGELKIADFGLARAFGI-PVRKYTHEVV-TLW 165
Query: 176 YMSLEYTM-SGTVSIKTDVFGFGVLVLKIVCG 206
Y + + M S S D++ G + ++V G
Sbjct: 166 YRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/152 (32%), Positives = 80/152 (52%), Gaps = 19/152 (12%)
Query: 70 EAKLIAKLQYTNLVKLLGCSIHGEERL-LVYEFMPN---KSLDSSFSG----TFKDLL-- 119
E ++ +L+++N+VKL IH ++RL LV+E + K LD G T K L
Sbjct: 50 EISILKELKHSNIVKLYDV-IHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQ 108
Query: 120 ----CLHKYSRLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYG 175
+ + R RV+HRDLK N+L++ + KI+DFG+AR FG+ T+ +V T
Sbjct: 109 LLNGIAYCHDR-RVLHRDLKPQNLLINREGELKIADFGLARAFGI-PVRKYTHEVV-TLW 165
Query: 176 YMSLEYTM-SGTVSIKTDVFGFGVLVLKIVCG 206
Y + + M S S D++ G + ++V G
Sbjct: 166 YRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 49/93 (52%), Gaps = 2/93 (2%)
Query: 130 IHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSI 189
IHRD+KA+N+LL + K++DFG+A + ++ N VGT +M+ E
Sbjct: 146 IHRDIKAANVLLSEHGEVKLADFGVAG--QLTDTQIKRNTFVGTPFWMAPEVIKQSAYDS 203
Query: 190 KTDVFGFGVLVLKIVCGKKNNKSYHTERPLNLV 222
K D++ G+ +++ G+ + H + L L+
Sbjct: 204 KADIWSLGITAIELARGEPPHSELHPMKVLFLI 236
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 91/189 (48%), Gaps = 42/189 (22%)
Query: 50 EVAIKRLAWTSGQGRVE-FQNEAKLIAKL-QYTNLVKLLGCSIHGEERLLVYE------- 100
+VA+K L T+ E +E K+++ L Q+ N+V LLG HG L++ E
Sbjct: 78 KVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDL 137
Query: 101 --FMPNKS----LDSSFS-----GTFKDLLCLHKYSRL----------RVIHRDLKASNI 139
F+ KS D +F+ + +DLL H S++ IHRD+ A N+
Sbjct: 138 LNFLRRKSRVLETDPAFAIANSTASTRDLL--HFSSQVAQGMAFLASKNCIHRDVAARNV 195
Query: 140 LLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYG-----YMSLEYTMSGTVSIKTDVF 194
LL + KI DFG+AR +N+S N IV +M+ E ++++DV+
Sbjct: 196 LLTNGHVAKIGDFGLARDI-MNDS----NYIVKGNARLPVKWMAPESIFDCVYTVQSDVW 250
Query: 195 GFGVLVLKI 203
+G+L+ +I
Sbjct: 251 SYGILLWEI 259
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 78/177 (44%), Gaps = 25/177 (14%)
Query: 51 VAIKRLAWTSGQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSL--- 107
V + + + G + + EA + L++ ++V+LL +V+EFM L
Sbjct: 57 VDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFE 116
Query: 108 -----DSSFSGTFKDLLCLHKYSRL----------RVIHRDLKASNILLDDQLNT---KI 149
D+ F + + + H ++ +IHRD+K N+LL + N+ K+
Sbjct: 117 IVKRADAGF--VYSEAVASHYMRQILEALRYCHDNNIIHRDVKPENVLLASKENSAPVKL 174
Query: 150 SDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKIVCG 206
DFG+A G ESG VGT +M+ E DV+G GV++ ++ G
Sbjct: 175 GDFGVAIQLG--ESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSG 229
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Query: 116 KDLLCLHKYSRLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYG 175
+D+ L + + HRD+K+ N+LL + L I+DFG+A F +S +T+ VGT
Sbjct: 139 EDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRR 198
Query: 176 YMSLEYTMSGTVSIKTDVF 194
YM+ E + G ++ + D F
Sbjct: 199 YMAPE-VLEGAINFQRDAF 216
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 84/200 (42%), Gaps = 37/200 (18%)
Query: 66 EFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSLDSSFSGTFKD----LLCL 121
EF EA ++ ++++ NLV+LLG ++ EFM +L + ++ L
Sbjct: 55 EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLL 114
Query: 122 HKYSRLR----------VIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIV 171
+ +++ IHRDL A N L+ + K++DFG++R+ + A+
Sbjct: 115 YMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF 174
Query: 172 GTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKIVCGKKN--------------NKSYHTER 217
+ + E SIK+DV+ FGVL+ +I + K Y ER
Sbjct: 175 PI-KWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMER 233
Query: 218 P-------LNLVGIAWQLWN 230
P L+ WQ WN
Sbjct: 234 PEGCPEKVYELMRACWQ-WN 252
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 80/200 (40%), Gaps = 37/200 (18%)
Query: 66 EFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSL--------DSSFSGTFKD 117
EF EA ++ ++++ NLV+LLG ++ EFM +L S
Sbjct: 55 EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLL 114
Query: 118 LLCLHKYSRLR------VIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIV 171
+ S + IHRDL A N L+ + K++DFG++R+ + A+
Sbjct: 115 YMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF 174
Query: 172 GTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKIVCGKKN--------------NKSYHTER 217
+ + E SIK+DV+ FGVL+ +I + K Y ER
Sbjct: 175 PI-KWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMER 233
Query: 218 P-------LNLVGIAWQLWN 230
P L+ WQ WN
Sbjct: 234 PEGCPEKVYELMRACWQ-WN 252
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 79/185 (42%), Gaps = 30/185 (16%)
Query: 49 QEVAIKRL--AWTSGQGRVEFQNEAKLIAKLQYTNLVKLLG-CSIHGEERLLVYEF---- 101
+ VA+K L T + R LI + N+V LLG C+ G +++ EF
Sbjct: 59 RTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 118
Query: 102 -------------MPNKSLDSSFSG--TFKDLLC--------LHKYSRLRVIHRDLKASN 138
+P K+ + + T + L+C + + + IHRDL A N
Sbjct: 119 NLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARN 178
Query: 139 ILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGV 198
ILL ++ KI DFG+AR + +M+ E +I++DV+ FGV
Sbjct: 179 ILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGV 238
Query: 199 LVLKI 203
L+ +I
Sbjct: 239 LLWEI 243
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 80/200 (40%), Gaps = 37/200 (18%)
Query: 66 EFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSL--------DSSFSGTFKD 117
EF EA ++ ++++ NLV+LLG ++ EFM +L S
Sbjct: 55 EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLL 114
Query: 118 LLCLHKYSRLR------VIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIV 171
+ S + IHRDL A N L+ + K++DFG++R+ + A+
Sbjct: 115 YMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF 174
Query: 172 GTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKIVCGKKN--------------NKSYHTER 217
+ + E SIK+DV+ FGVL+ +I + K Y ER
Sbjct: 175 PI-KWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMER 233
Query: 218 P-------LNLVGIAWQLWN 230
P L+ WQ WN
Sbjct: 234 PEGCPEKVYELMRACWQ-WN 252
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 84/200 (42%), Gaps = 37/200 (18%)
Query: 66 EFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSLDSSFSGTFKD----LLCL 121
EF EA ++ ++++ NLV+LLG ++ EFM +L + ++ L
Sbjct: 57 EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLL 116
Query: 122 HKYSRLR----------VIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIV 171
+ +++ IHRDL A N L+ + K++DFG++R+ + A+
Sbjct: 117 YMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF 176
Query: 172 GTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKIVCGKKN--------------NKSYHTER 217
+ + E SIK+DV+ FGVL+ +I + K Y ER
Sbjct: 177 PI-KWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMER 235
Query: 218 P-------LNLVGIAWQLWN 230
P L+ WQ WN
Sbjct: 236 PEGCPEKVYELMRACWQ-WN 254
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 78/189 (41%), Gaps = 27/189 (14%)
Query: 42 VGKFPNEQEVAIKRL--AWTSGQGRVEFQNEAKLIAKLQYTNLVKLLG-CSIHGEERLLV 98
+ K + VA+K L T + R LI + N+V LLG C+ G +++
Sbjct: 51 IDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVI 110
Query: 99 YEFMPNKSLDS----------SFSGTFKDLLCLHKY--------------SRLRVIHRDL 134
EF +L + + +KD L L + + IHRDL
Sbjct: 111 VEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYSFQVAKGMEFLASRKXIHRDL 170
Query: 135 KASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVF 194
A NILL ++ KI DFG+AR + +M+ E +I++DV+
Sbjct: 171 AARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVW 230
Query: 195 GFGVLVLKI 203
FGVL+ +I
Sbjct: 231 SFGVLLWEI 239
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 66/150 (44%), Gaps = 17/150 (11%)
Query: 69 NEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSLDSSFS--GTFKD--------- 117
NE +++ + + LVKL +V E++P + S G F +
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQ 149
Query: 118 -LLCLHKYSRLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGY 176
+L L +I+RDLK N+L+D Q K++DFG A+ T + GT Y
Sbjct: 150 IVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAK-----RVKGRTWXLCGTPEY 204
Query: 177 MSLEYTMSGTVSIKTDVFGFGVLVLKIVCG 206
++ E +S + D + GVL+ ++ G
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 80/200 (40%), Gaps = 37/200 (18%)
Query: 66 EFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSL--------DSSFSGTFKD 117
EF EA ++ ++++ NLV+LLG ++ EFM +L S
Sbjct: 55 EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLL 114
Query: 118 LLCLHKYSRLR------VIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIV 171
+ S + IHRDL A N L+ + K++DFG++R+ + A+
Sbjct: 115 YMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF 174
Query: 172 GTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKIVCGKKN--------------NKSYHTER 217
+ + E SIK+DV+ FGVL+ +I + K Y ER
Sbjct: 175 PI-KWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMER 233
Query: 218 P-------LNLVGIAWQLWN 230
P L+ WQ WN
Sbjct: 234 PEGCPEKVYELMRACWQ-WN 252
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 84/200 (42%), Gaps = 37/200 (18%)
Query: 66 EFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSLDSSFSGTFKD----LLCL 121
EF EA ++ ++++ NLV+LLG ++ EFM +L + ++ L
Sbjct: 60 EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLL 119
Query: 122 HKYSRLR----------VIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIV 171
+ +++ IHRDL A N L+ + K++DFG++R+ + A+
Sbjct: 120 YMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF 179
Query: 172 GTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKIVCGKKN--------------NKSYHTER 217
+ + E SIK+DV+ FGVL+ +I + K Y ER
Sbjct: 180 PI-KWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMER 238
Query: 218 P-------LNLVGIAWQLWN 230
P L+ WQ WN
Sbjct: 239 PEGCPEKVYELMRACWQ-WN 257
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 80/200 (40%), Gaps = 37/200 (18%)
Query: 66 EFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSL--------DSSFSGTFKD 117
EF EA ++ ++++ NLV+LLG ++ EFM +L S
Sbjct: 60 EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLL 119
Query: 118 LLCLHKYSRLR------VIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIV 171
+ S + IHRDL A N L+ + K++DFG++R+ + A+
Sbjct: 120 YMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF 179
Query: 172 GTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKIVCGKKN--------------NKSYHTER 217
+ + E SIK+DV+ FGVL+ +I + K Y ER
Sbjct: 180 PI-KWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMER 238
Query: 218 P-------LNLVGIAWQLWN 230
P L+ WQ WN
Sbjct: 239 PEGCPEKVYELMRACWQ-WN 257
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 88/187 (47%), Gaps = 38/187 (20%)
Query: 50 EVAIKRLAWTSGQGRVE-FQNEAKLIAKL-QYTNLVKLLGCSIHGEERLLVYE------- 100
+VA+K L T+ E +E K+++ L Q+ N+V LLG HG L++ E
Sbjct: 78 KVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDL 137
Query: 101 --FMPNKS----LDSSFS---GTFKDLLCLHKYSRL----------RVIHRDLKASNILL 141
F+ KS D +F+ T LH S++ IHRD+ A N+LL
Sbjct: 138 LNFLRRKSRVLETDPAFAIANSTLSTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLL 197
Query: 142 DDQLNTKISDFGMARIFGVNESGANTNRIVGTYG-----YMSLEYTMSGTVSIKTDVFGF 196
+ KI DFG+AR +N+S N IV +M+ E ++++DV+ +
Sbjct: 198 TNGHVAKIGDFGLARDI-MNDS----NYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSY 252
Query: 197 GVLVLKI 203
G+L+ +I
Sbjct: 253 GILLWEI 259
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 84/200 (42%), Gaps = 37/200 (18%)
Query: 66 EFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSLDSSFSGTFKD----LLCL 121
EF EA ++ ++++ NLV+LLG ++ EFM +L + ++ L
Sbjct: 57 EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLL 116
Query: 122 HKYSRLR----------VIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIV 171
+ +++ IHRDL A N L+ + K++DFG++R+ + A+
Sbjct: 117 YMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF 176
Query: 172 GTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKIVCGKKN--------------NKSYHTER 217
+ + E SIK+DV+ FGVL+ +I + K Y ER
Sbjct: 177 PI-KWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMER 235
Query: 218 P-------LNLVGIAWQLWN 230
P L+ WQ WN
Sbjct: 236 PEGCPEKVYELMRACWQ-WN 254
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 80/200 (40%), Gaps = 37/200 (18%)
Query: 66 EFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSL--------DSSFSGTFKD 117
EF EA ++ ++++ NLV+LLG ++ EFM +L S
Sbjct: 55 EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLL 114
Query: 118 LLCLHKYSRLR------VIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIV 171
+ S + IHRDL A N L+ + K++DFG++R+ + A+
Sbjct: 115 YMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF 174
Query: 172 GTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKIVCGKKN--------------NKSYHTER 217
+ + E SIK+DV+ FGVL+ +I + K Y ER
Sbjct: 175 PI-KWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMER 233
Query: 218 P-------LNLVGIAWQLWN 230
P L+ WQ WN
Sbjct: 234 PEGCPEKVYELMRACWQ-WN 252
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 83/175 (47%), Gaps = 21/175 (12%)
Query: 49 QEVAIKRLAWTSGQGRV-EFQNEAKLIAKLQYTNLVKLLG-CSIHGEERL-LVYEFMPNK 105
++VA+K L SG + + + E +++ L + N+VK G C+ G + L+ EF+P+
Sbjct: 51 EQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSG 110
Query: 106 SLDSSFSGTFKDLLCLHKYSRLRV--------------IHRDLKASNILLDDQLNTKISD 151
SL K+ + L + + V +HRDL A N+L++ + KI D
Sbjct: 111 SLKEYLPKN-KNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGD 169
Query: 152 FGMARIFGVNESGANT--NRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKIV 204
FG+ + ++ +R + Y + E M I +DV+ FGV + +++
Sbjct: 170 FGLTKAIETDKEXXTVKDDRDSPVFWY-APECLMQSKFYIASDVWSFGVTLHELL 223
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 83/175 (47%), Gaps = 21/175 (12%)
Query: 49 QEVAIKRLAWTSGQGRV-EFQNEAKLIAKLQYTNLVKLLG-CSIHGEERL-LVYEFMPNK 105
++VA+K L SG + + + E +++ L + N+VK G C+ G + L+ EF+P+
Sbjct: 39 EQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSG 98
Query: 106 SLDSSFSGTFKDLLCLHKYSRLRV--------------IHRDLKASNILLDDQLNTKISD 151
SL K+ + L + + V +HRDL A N+L++ + KI D
Sbjct: 99 SLKEYLPKN-KNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGD 157
Query: 152 FGMARIFGVNESGANT--NRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKIV 204
FG+ + ++ +R + Y + E M I +DV+ FGV + +++
Sbjct: 158 FGLTKAIETDKEXXTVKDDRDSPVFWY-APECLMQSKFYIASDVWSFGVTLHELL 211
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 53/101 (52%), Gaps = 5/101 (4%)
Query: 125 SRLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVG--TYGYMSLEYT 182
+ + ++HRDL A NIL+ + KISDFG++R V E + R G +M++E
Sbjct: 167 AEMSLVHRDLAARNILVAEGRKMKISDFGLSR--DVYEEDSXVKRSQGRIPVKWMAIESL 224
Query: 183 MSGTVSIKTDVFGFGVLVLKIVC-GKKNNKSYHTERPLNLV 222
+ ++DV+ FGVL+ +IV G ER NL+
Sbjct: 225 FDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLL 265
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 84/200 (42%), Gaps = 37/200 (18%)
Query: 66 EFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSLDSSFSGTFKD----LLCL 121
EF EA ++ ++++ NLV+LLG ++ EFM +L + ++ L
Sbjct: 68 EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLL 127
Query: 122 HKYSRLR----------VIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIV 171
+ +++ IHRDL A N L+ + K++DFG++R+ + A+
Sbjct: 128 YMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF 187
Query: 172 GTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKIVCGKKN--------------NKSYHTER 217
+ + E SIK+DV+ FGVL+ +I + K Y ER
Sbjct: 188 PI-KWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMER 246
Query: 218 P-------LNLVGIAWQLWN 230
P L+ WQ WN
Sbjct: 247 PEGCPEKVYELMRACWQ-WN 265
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 65/154 (42%), Gaps = 16/154 (10%)
Query: 66 EFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPN----------KSLDSSFSGTF 115
+ + E ++ + L++ N+++L G L+ E+ P D + T+
Sbjct: 59 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATY 118
Query: 116 KDLLC--LHKYSRLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGT 173
L L RVIHRD+K N+LL KI+DFG + V+ + + GT
Sbjct: 119 ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGT 174
Query: 174 YGYMSLEYTMSGTVSIKTDVFGFGVLVLKIVCGK 207
Y+ E K D++ GVL + + GK
Sbjct: 175 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 208
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 85/179 (47%), Gaps = 25/179 (13%)
Query: 50 EVAIKRLAWTSG--QGRVEFQNEAKLIAKLQYTNLVKLLG----------------CSIH 91
+VA+K L T+ Q F+NE ++ K ++ N++ +G S++
Sbjct: 32 DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQLAIVTQWCEGSSLY 91
Query: 92 GEERLLVYEFMPNKSLDSSFSGTFKDLLCLHKYSRLRVIHRDLKASNILLDDQLNTKISD 151
++ +F K +D + T + + LH S +IHRDLK++NI L + L KI D
Sbjct: 92 HHLHIIETKFEMIKLIDIA-RQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGD 147
Query: 152 FGMARIFGVNESGANTNRIVGTYGYMSLEYTM---SGTVSIKTDVFGFGVLVLKIVCGK 207
FG+A ++ G+ +M+ E S ++DV+ FG+++ +++ G+
Sbjct: 148 FGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 206
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 68/154 (44%), Gaps = 16/154 (10%)
Query: 66 EFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSL----------DSSFSGTF 115
+ + E ++ + L++ N+++L G L+ E+ P ++ D + T+
Sbjct: 80 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY 139
Query: 116 KDLLC--LHKYSRLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGT 173
L L RVIHRD+K N+LL KI+DFG + V+ + + + GT
Sbjct: 140 ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRDDLCGT 195
Query: 174 YGYMSLEYTMSGTVSIKTDVFGFGVLVLKIVCGK 207
Y+ E K D++ GVL + + GK
Sbjct: 196 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 229
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 65/154 (42%), Gaps = 16/154 (10%)
Query: 66 EFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPN----------KSLDSSFSGTF 115
+ + E ++ + L++ N+++L G L+ E+ P D + T+
Sbjct: 59 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATY 118
Query: 116 KDLLC--LHKYSRLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGT 173
L L RVIHRD+K N+LL KI+DFG + V+ + + GT
Sbjct: 119 ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRXXLXGT 174
Query: 174 YGYMSLEYTMSGTVSIKTDVFGFGVLVLKIVCGK 207
Y+ E K D++ GVL + + GK
Sbjct: 175 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 208
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 95/213 (44%), Gaps = 30/213 (14%)
Query: 21 NSSLDWHMYIQQEQTRDRV-------ILVGKFPNEQEVAIKRLAWTSGQGRVEFQNEAKL 73
+SS DW + Q R+ + GK+ + V + + + Q F+NE +
Sbjct: 14 DSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGV 73
Query: 74 IAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSL-------DSSFS---------GTFKD 117
+ K ++ N++ +G S + +V ++ SL ++ F T +
Sbjct: 74 LRKTRHVNILLFMGYSTK-PQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARG 132
Query: 118 LLCLHKYSRLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYM 177
+ LH S +IHRDLK++NI L + KI DFG+A ++ G+ +M
Sbjct: 133 MDYLHAKS---IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWM 189
Query: 178 SLEYTM---SGTVSIKTDVFGFGVLVLKIVCGK 207
+ E S S ++DV+ FG+++ +++ G+
Sbjct: 190 APEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQ 222
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 80/200 (40%), Gaps = 37/200 (18%)
Query: 66 EFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSL--------DSSFSGTFKD 117
EF EA ++ ++++ NLV+LLG ++ EFM +L S
Sbjct: 53 EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLL 112
Query: 118 LLCLHKYSRLR------VIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIV 171
+ S + IHRDL A N L+ + K++DFG++R+ + A+
Sbjct: 113 YMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTFTAHAGAKF 172
Query: 172 GTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKIVCGKKN--------------NKSYHTER 217
+ + E SIK+DV+ FGVL+ +I + K Y ER
Sbjct: 173 PI-KWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLEKDYRMER 231
Query: 218 P-------LNLVGIAWQLWN 230
P L+ WQ WN
Sbjct: 232 PEGCPEKVYELMRACWQ-WN 250
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 67/154 (43%), Gaps = 16/154 (10%)
Query: 66 EFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSL----------DSSFSGTF 115
+ + E ++ + L++ N+++L G L+ E+ P ++ D + T+
Sbjct: 54 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY 113
Query: 116 KDLLC--LHKYSRLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGT 173
L L RVIHRD+K N+LL KI+DFG + V+ + + GT
Sbjct: 114 ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTELCGT 169
Query: 174 YGYMSLEYTMSGTVSIKTDVFGFGVLVLKIVCGK 207
Y+ E K D++ GVL + + GK
Sbjct: 170 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 77/191 (40%), Gaps = 29/191 (15%)
Query: 42 VGKFPNEQEVAIKRL--AWTSGQGRVEFQNEAKLIAKLQYTNLVKLLG-CSIHGEERLLV 98
+ K + VA+K L T + R LI + N+V LLG C+ G +++
Sbjct: 53 IDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVI 112
Query: 99 YEFMPNKSLDSSFSGT------------FKDLLCLHKY--------------SRLRVIHR 132
EF +L + +KD L L + + IHR
Sbjct: 113 VEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXYSFQVAKGMEFLASRKXIHR 172
Query: 133 DLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTD 192
DL A NILL ++ KI DFG+AR + +M+ E +I++D
Sbjct: 173 DLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSD 232
Query: 193 VFGFGVLVLKI 203
V+ FGVL+ +I
Sbjct: 233 VWSFGVLLWEI 243
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 75/156 (48%), Gaps = 24/156 (15%)
Query: 70 EAKLIAKLQYTNLVKLLGCSIHGEERL-LVYE--------FM--------PNKSLDSSFS 112
E L+ +L + N+VKLL IH E +L LV+E FM P + S
Sbjct: 51 EISLLKELNHPNIVKLLDV-IHTENKLYLVFEHVHQDLKTFMDASALTGIPLPLIKSYLF 109
Query: 113 GTFKDLLCLHKYSRLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVG 172
+ L H + RV+HRDLK N+L++ + K++DFG+AR FGV T+ +V
Sbjct: 110 QLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEVV- 164
Query: 173 TYGYMSLEYTMS-GTVSIKTDVFGFGVLVLKIVCGK 207
T Y + E + S D++ G + ++V +
Sbjct: 165 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 67/154 (43%), Gaps = 16/154 (10%)
Query: 66 EFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSL----------DSSFSGTF 115
+ + E ++ + L++ N+++L G L+ E+ P ++ D + T+
Sbjct: 80 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY 139
Query: 116 KDLLC--LHKYSRLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGT 173
L L RVIHRD+K N+LL KI+DFG + V+ + + GT
Sbjct: 140 ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGT 195
Query: 174 YGYMSLEYTMSGTVSIKTDVFGFGVLVLKIVCGK 207
Y+ E K D++ GVL + + GK
Sbjct: 196 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 229
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 66/150 (44%), Gaps = 17/150 (11%)
Query: 69 NEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSLDSSFS--GTFKD--------- 117
NE +++ + + LVKL +V E+ P + S G F +
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQ 149
Query: 118 -LLCLHKYSRLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGY 176
+L L +I+RDLK N+++D Q K++DFG+A+ T + GT Y
Sbjct: 150 IVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGLAK-----RVKGRTWXLCGTPEY 204
Query: 177 MSLEYTMSGTVSIKTDVFGFGVLVLKIVCG 206
++ E +S + D + GVL+ ++ G
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 84/203 (41%), Gaps = 43/203 (21%)
Query: 66 EFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSLDSSFSGTFKD----LLCL 121
EF EA ++ ++++ NLV+LLG ++ EFM +L + ++ L
Sbjct: 56 EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLL 115
Query: 122 HKYSRLR----------VIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIV 171
+ +++ IHRDL A N L+ + K++DFG++R+ +G
Sbjct: 116 YMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLM----TGDTYTAPA 171
Query: 172 GT---YGYMSLEYTMSGTVSIKTDVFGFGVLVLKIVCGKKN--------------NKSYH 214
G + + E SIK+DV+ FGVL+ +I + K Y
Sbjct: 172 GAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYR 231
Query: 215 TERP-------LNLVGIAWQLWN 230
ERP L+ WQ WN
Sbjct: 232 MERPEGCPEKVYELMRACWQ-WN 253
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 68/154 (44%), Gaps = 16/154 (10%)
Query: 66 EFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSL----------DSSFSGTF 115
+ + E ++ + L++ N+++L G L+ E+ P ++ D + T+
Sbjct: 55 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY 114
Query: 116 KDLLC--LHKYSRLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGT 173
L L RVIHRD+K N+LL KI+DFG + V+ + + + GT
Sbjct: 115 ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRDTLCGT 170
Query: 174 YGYMSLEYTMSGTVSIKTDVFGFGVLVLKIVCGK 207
Y+ E K D++ GVL + + GK
Sbjct: 171 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 204
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 84/203 (41%), Gaps = 43/203 (21%)
Query: 66 EFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSLDSSFSGTFKD----LLCL 121
EF EA ++ ++++ NLV+LLG ++ EFM +L + ++ L
Sbjct: 57 EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLL 116
Query: 122 HKYSRLR----------VIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIV 171
+ +++ IHRDL A N L+ + K++DFG++R+ +G
Sbjct: 117 YMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLM----TGDTYTAPA 172
Query: 172 GT---YGYMSLEYTMSGTVSIKTDVFGFGVLVLKIVCGKKN--------------NKSYH 214
G + + E SIK+DV+ FGVL+ +I + K Y
Sbjct: 173 GAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYR 232
Query: 215 TERP-------LNLVGIAWQLWN 230
ERP L+ WQ WN
Sbjct: 233 MERPEGCPEKVYELMRACWQ-WN 254
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 68/154 (44%), Gaps = 16/154 (10%)
Query: 66 EFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSL----------DSSFSGTF 115
+ + E ++ + L++ N+++L G L+ E+ P ++ D + T+
Sbjct: 57 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY 116
Query: 116 KDLLC--LHKYSRLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGT 173
L L RVIHRD+K N+LL KI+DFG + V+ + + + GT
Sbjct: 117 ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRDDLCGT 172
Query: 174 YGYMSLEYTMSGTVSIKTDVFGFGVLVLKIVCGK 207
Y+ E K D++ GVL + + GK
Sbjct: 173 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 67/154 (43%), Gaps = 16/154 (10%)
Query: 66 EFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSL----------DSSFSGTF 115
+ + E ++ + L++ N+++L G L+ E+ P ++ D + T+
Sbjct: 54 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY 113
Query: 116 KDLLC--LHKYSRLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGT 173
L L RVIHRD+K N+LL KI+DFG + V+ + + GT
Sbjct: 114 ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGT 169
Query: 174 YGYMSLEYTMSGTVSIKTDVFGFGVLVLKIVCGK 207
Y+ E K D++ GVL + + GK
Sbjct: 170 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 67/154 (43%), Gaps = 16/154 (10%)
Query: 66 EFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSL----------DSSFSGTF 115
+ + E ++ + L++ N+++L G L+ E+ P ++ D + T+
Sbjct: 53 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY 112
Query: 116 KDLLC--LHKYSRLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGT 173
L L RVIHRD+K N+LL KI+DFG + V+ + + GT
Sbjct: 113 ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGT 168
Query: 174 YGYMSLEYTMSGTVSIKTDVFGFGVLVLKIVCGK 207
Y+ E K D++ GVL + + GK
Sbjct: 169 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 202
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 67/154 (43%), Gaps = 16/154 (10%)
Query: 66 EFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSL----------DSSFSGTF 115
+ + E ++ + L++ N+++L G L+ E+ P ++ D + T+
Sbjct: 54 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY 113
Query: 116 KDLLC--LHKYSRLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGT 173
L L RVIHRD+K N+LL KI+DFG + V+ + + GT
Sbjct: 114 ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTXLCGT 169
Query: 174 YGYMSLEYTMSGTVSIKTDVFGFGVLVLKIVCGK 207
Y+ E K D++ GVL + + GK
Sbjct: 170 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 67/154 (43%), Gaps = 16/154 (10%)
Query: 66 EFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSL----------DSSFSGTF 115
+ + E ++ + L++ N+++L G L+ E+ P ++ D + T+
Sbjct: 57 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY 116
Query: 116 KDLLC--LHKYSRLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGT 173
L L RVIHRD+K N+LL KI+DFG + V+ + + GT
Sbjct: 117 ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGT 172
Query: 174 YGYMSLEYTMSGTVSIKTDVFGFGVLVLKIVCGK 207
Y+ E K D++ GVL + + GK
Sbjct: 173 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 85/179 (47%), Gaps = 25/179 (13%)
Query: 50 EVAIKRLAWTSG--QGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSL 107
+VA+K L T+ Q F+NE ++ K ++ N++ +G S + +V ++ SL
Sbjct: 48 DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST-APQLAIVTQWCEGSSL 106
Query: 108 -------DSSFS---------GTFKDLLCLHKYSRLRVIHRDLKASNILLDDQLNTKISD 151
++ F T + + LH S +IHRDLK++NI L + KI D
Sbjct: 107 YHHLHASETKFEMKKLIDIARQTARGMDYLHAKS---IIHRDLKSNNIFLHEDNTVKIGD 163
Query: 152 FGMARIFGVNESGANTNRIVGTYGYMSLEYTM---SGTVSIKTDVFGFGVLVLKIVCGK 207
FG+A ++ G+ +M+ E S S ++DV+ FG+++ +++ G+
Sbjct: 164 FGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQ 222
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 67/154 (43%), Gaps = 16/154 (10%)
Query: 66 EFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSL----------DSSFSGTF 115
+ + E ++ + L++ N+++L G L+ E+ P ++ D + T+
Sbjct: 71 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY 130
Query: 116 KDLLC--LHKYSRLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGT 173
L L RVIHRD+K N+LL KI+DFG + V+ + + GT
Sbjct: 131 ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGT 186
Query: 174 YGYMSLEYTMSGTVSIKTDVFGFGVLVLKIVCGK 207
Y+ E K D++ GVL + + GK
Sbjct: 187 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 220
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 87/188 (46%), Gaps = 31/188 (16%)
Query: 38 RVILVGKFPNEQEVAIK-----RLAWTSGQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHG 92
R +L G+ EVA+K +L TS Q + E +++ L + N+VKL I
Sbjct: 35 RHVLTGR-----EVAVKIIDKTQLNPTSLQ---KLFREVRIMKILNHPNIVKLFEV-IET 85
Query: 93 EERL-LVYEFMPNKSL-----------DSSFSGTFKDLLCLHKYSRLR-VIHRDLKASNI 139
E+ L LV E+ + + F+ ++ +Y + ++HRDLKA N+
Sbjct: 86 EKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKYIVHRDLKAENL 145
Query: 140 LLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLE-YTMSGTVSIKTDVFGFGV 198
LLD +N KI+DFG + F V G + G+ Y + E + + DV+ GV
Sbjct: 146 LLDGDMNIKIADFGFSNEFTV---GNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGV 202
Query: 199 LVLKIVCG 206
++ +V G
Sbjct: 203 ILYTLVSG 210
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 67/154 (43%), Gaps = 16/154 (10%)
Query: 66 EFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSL----------DSSFSGTF 115
+ + E ++ + L++ N+++L G L+ E+ P ++ D + T+
Sbjct: 54 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY 113
Query: 116 KDLLC--LHKYSRLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGT 173
L L RVIHRD+K N+LL KI+DFG + V+ + + GT
Sbjct: 114 ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTDLCGT 169
Query: 174 YGYMSLEYTMSGTVSIKTDVFGFGVLVLKIVCGK 207
Y+ E K D++ GVL + + GK
Sbjct: 170 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 67/154 (43%), Gaps = 16/154 (10%)
Query: 66 EFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSL----------DSSFSGTF 115
+ + E ++ + L++ N+++L G L+ E+ P ++ D + T+
Sbjct: 59 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY 118
Query: 116 KDLLC--LHKYSRLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGT 173
L L RVIHRD+K N+LL KI+DFG + V+ + + GT
Sbjct: 119 ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGT 174
Query: 174 YGYMSLEYTMSGTVSIKTDVFGFGVLVLKIVCGK 207
Y+ E K D++ GVL + + GK
Sbjct: 175 LDYLPPEXIEGRXHDEKVDLWSLGVLCYEFLVGK 208
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 67/154 (43%), Gaps = 16/154 (10%)
Query: 66 EFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSL----------DSSFSGTF 115
+ + E ++ + L++ N+++L G L+ E+ P ++ D + T+
Sbjct: 59 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY 118
Query: 116 KDLLC--LHKYSRLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGT 173
L L RVIHRD+K N+LL KI+DFG + V+ + + GT
Sbjct: 119 ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGT 174
Query: 174 YGYMSLEYTMSGTVSIKTDVFGFGVLVLKIVCGK 207
Y+ E K D++ GVL + + GK
Sbjct: 175 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 208
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 67/154 (43%), Gaps = 16/154 (10%)
Query: 66 EFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSL----------DSSFSGTF 115
+ + E ++ + L++ N+++L G L+ E+ P ++ D + T+
Sbjct: 54 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY 113
Query: 116 KDLLC--LHKYSRLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGT 173
L L RVIHRD+K N+LL KI+DFG + V+ + + GT
Sbjct: 114 ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTDLCGT 169
Query: 174 YGYMSLEYTMSGTVSIKTDVFGFGVLVLKIVCGK 207
Y+ E K D++ GVL + + GK
Sbjct: 170 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 48/90 (53%), Gaps = 5/90 (5%)
Query: 118 LLCLHKYSRLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYM 177
L LHK +I+RDLK N++LD + + KI+DFGM + ++ G T GT Y+
Sbjct: 133 LFFLHKRG---IIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMD--GVTTREFCGTPDYI 187
Query: 178 SLEYTMSGTVSIKTDVFGFGVLVLKIVCGK 207
+ E D + +GVL+ +++ G+
Sbjct: 188 APEIIAYQPYGKSVDWWAYGVLLYEMLAGQ 217
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 75/186 (40%), Gaps = 31/186 (16%)
Query: 49 QEVAIKRL--AWTSGQGRVEFQNEAKLIAKLQYTNLVKLLG-CSIHGEERLLVYEFMPNK 105
+ VA+K L T + R LI + N+V LLG C+ G +++ EF
Sbjct: 58 RTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 117
Query: 106 SLDSSFSGT--------------FKDLLCLHKY--------------SRLRVIHRDLKAS 137
+L + +KD L L + + IHRDL A
Sbjct: 118 NLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAAR 177
Query: 138 NILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFG 197
NILL ++ KI DFG+AR + +M+ E +I++DV+ FG
Sbjct: 178 NILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFG 237
Query: 198 VLVLKI 203
VL+ +I
Sbjct: 238 VLLWEI 243
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 66/150 (44%), Gaps = 17/150 (11%)
Query: 69 NEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSLDSSFS--GTFKD--------- 117
NE +++ + + LVKL +V E++P + S G F +
Sbjct: 83 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQ 142
Query: 118 -LLCLHKYSRLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGY 176
+L L +I+RDLK N+L+D Q +++DFG A+ T + GT Y
Sbjct: 143 IVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEY 197
Query: 177 MSLEYTMSGTVSIKTDVFGFGVLVLKIVCG 206
++ E +S + D + GVL+ ++ G
Sbjct: 198 LAPEIILSKGYNKAVDWWALGVLIYEMAAG 227
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 66/150 (44%), Gaps = 17/150 (11%)
Query: 69 NEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSLDSSFS--GTFKD--------- 117
NE +++ + + LVKL +V E++P + S G F +
Sbjct: 90 NEKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQ 149
Query: 118 -LLCLHKYSRLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGY 176
+L L +I+RDLK N+L+D Q +++DFG A+ T + GT Y
Sbjct: 150 IVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEY 204
Query: 177 MSLEYTMSGTVSIKTDVFGFGVLVLKIVCG 206
++ E +S + D + GVL+ ++ G
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 66/150 (44%), Gaps = 17/150 (11%)
Query: 69 NEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSLDSSFS--GTFKD--------- 117
NE +++ + + LVKL +V E++P + S G F +
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQ 149
Query: 118 -LLCLHKYSRLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGY 176
+L L +I+RDLK N+L+D Q +++DFG A+ T + GT Y
Sbjct: 150 IVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEY 204
Query: 177 MSLEYTMSGTVSIKTDVFGFGVLVLKIVCG 206
++ E +S + D + GVL+ ++ G
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 67/154 (43%), Gaps = 16/154 (10%)
Query: 66 EFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSL----------DSSFSGTF 115
+ + E ++ + L++ N+++L G L+ E+ P ++ D + T+
Sbjct: 56 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY 115
Query: 116 KDLLC--LHKYSRLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGT 173
L L RVIHRD+K N+LL KI+DFG + V+ + + GT
Sbjct: 116 ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRXXLCGT 171
Query: 174 YGYMSLEYTMSGTVSIKTDVFGFGVLVLKIVCGK 207
Y+ E K D++ GVL + + GK
Sbjct: 172 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 205
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 81/173 (46%), Gaps = 22/173 (12%)
Query: 51 VAIKRLAWTSGQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKS---- 106
A K + S + ++ E +++A + +VKLLG H + ++ EF P +
Sbjct: 39 AAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAI 98
Query: 107 ---LDSSFSGTFKDLLCLHKYSRL------RVIHRDLKASNILLDDQLNTKISDFGMARI 157
LD + ++C L R+IHRDLKA N+L+ + + +++DFG++
Sbjct: 99 MLELDRGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVS-- 156
Query: 158 FGVN-ESGANTNRIVGTYGYMSLEYTMSGTV-----SIKTDVFGFGVLVLKIV 204
N ++ + +GT +M+ E M T+ K D++ G+ ++++
Sbjct: 157 -AKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMA 208
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 66/150 (44%), Gaps = 17/150 (11%)
Query: 69 NEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSLDSSFS--GTFKD--------- 117
NE +++ + + LVKL +V E++P + S G F +
Sbjct: 90 NEKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQ 149
Query: 118 -LLCLHKYSRLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGY 176
+L L +I+RDLK N+L+D Q +++DFG A+ T + GT Y
Sbjct: 150 IVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEY 204
Query: 177 MSLEYTMSGTVSIKTDVFGFGVLVLKIVCG 206
++ E +S + D + GVL+ ++ G
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 65/150 (43%), Gaps = 17/150 (11%)
Query: 69 NEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSLDSSFS--GTFKD--------- 117
NE +++ + + LVKL +V E+ P + S G F +
Sbjct: 91 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQ 150
Query: 118 -LLCLHKYSRLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGY 176
+L L +I+RDLK N+++D Q K++DFG A+ T + GT Y
Sbjct: 151 IVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAK-----RVKGRTWXLCGTPEY 205
Query: 177 MSLEYTMSGTVSIKTDVFGFGVLVLKIVCG 206
++ E +S + D + GVL+ ++ G
Sbjct: 206 LAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 66/150 (44%), Gaps = 17/150 (11%)
Query: 69 NEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSLDSSFS--GTFKD--------- 117
NE +++ + + LVKL +V E++P + S G F +
Sbjct: 76 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQ 135
Query: 118 -LLCLHKYSRLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGY 176
+L L +I+RDLK N+L+D Q +++DFG A+ T + GT Y
Sbjct: 136 IVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWTLCGTPEY 190
Query: 177 MSLEYTMSGTVSIKTDVFGFGVLVLKIVCG 206
++ E +S + D + GVL+ ++ G
Sbjct: 191 LAPEIILSKGYNKAVDWWALGVLIYEMAAG 220
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 66/150 (44%), Gaps = 17/150 (11%)
Query: 69 NEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSLDSSFS--GTFKD--------- 117
NE +++ + + LVKL +V E++P + S G F +
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQ 149
Query: 118 -LLCLHKYSRLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGY 176
+L L +I+RDLK N+L+D Q +++DFG A+ T + GT Y
Sbjct: 150 IVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEY 204
Query: 177 MSLEYTMSGTVSIKTDVFGFGVLVLKIVCG 206
++ E +S + D + GVL+ ++ G
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 66/150 (44%), Gaps = 17/150 (11%)
Query: 69 NEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSLDSSFS--GTFKD--------- 117
NE +++ + + LVKL +V E++P + S G F +
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQ 149
Query: 118 -LLCLHKYSRLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGY 176
+L L +I+RDLK N+L+D Q +++DFG A+ T + GT Y
Sbjct: 150 IVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEY 204
Query: 177 MSLEYTMSGTVSIKTDVFGFGVLVLKIVCG 206
++ E +S + D + GVL+ ++ G
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 65/150 (43%), Gaps = 17/150 (11%)
Query: 69 NEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSLDSSFS--GTFKD--------- 117
NE +++ + + LVKL +V E+ P + S G F +
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQ 149
Query: 118 -LLCLHKYSRLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGY 176
+L L +I+RDLK N+++D Q K++DFG A+ T + GT Y
Sbjct: 150 IVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAK-----RVKGRTWXLCGTPEY 204
Query: 177 MSLEYTMSGTVSIKTDVFGFGVLVLKIVCG 206
++ E +S + D + GVL+ ++ G
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 66/150 (44%), Gaps = 17/150 (11%)
Query: 69 NEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSLDSSFS--GTFKD--------- 117
NE +++ + + LVKL +V E++P + S G F +
Sbjct: 90 NEKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQ 149
Query: 118 -LLCLHKYSRLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGY 176
+L L +I+RDLK N+L+D Q +++DFG A+ T + GT Y
Sbjct: 150 IVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEY 204
Query: 177 MSLEYTMSGTVSIKTDVFGFGVLVLKIVCG 206
++ E +S + D + GVL+ ++ G
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 66/150 (44%), Gaps = 17/150 (11%)
Query: 69 NEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSLDSSFS--GTFKD--------- 117
NE +++ + + LVKL +V E++P + S G F +
Sbjct: 91 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQ 150
Query: 118 -LLCLHKYSRLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGY 176
+L L +I+RDLK N+L+D Q +++DFG A+ T + GT Y
Sbjct: 151 IVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEY 205
Query: 177 MSLEYTMSGTVSIKTDVFGFGVLVLKIVCG 206
++ E +S + D + GVL+ ++ G
Sbjct: 206 LAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 66/150 (44%), Gaps = 17/150 (11%)
Query: 69 NEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSLDSSFS--GTFKD--------- 117
NE +++ + + LVKL +V E++P + S G F +
Sbjct: 91 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQ 150
Query: 118 -LLCLHKYSRLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGY 176
+L L +I+RDLK N+L+D Q +++DFG A+ T + GT Y
Sbjct: 151 IVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEY 205
Query: 177 MSLEYTMSGTVSIKTDVFGFGVLVLKIVCG 206
++ E +S + D + GVL+ ++ G
Sbjct: 206 LAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 66/150 (44%), Gaps = 17/150 (11%)
Query: 69 NEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSLDSSFS--GTFKD--------- 117
NE +++ + + LVKL +V E++P + S G F +
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQ 149
Query: 118 -LLCLHKYSRLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGY 176
+L L +I+RDLK N+L+D Q +++DFG A+ T + GT Y
Sbjct: 150 IVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEY 204
Query: 177 MSLEYTMSGTVSIKTDVFGFGVLVLKIVCG 206
++ E +S + D + GVL+ ++ G
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 65/150 (43%), Gaps = 17/150 (11%)
Query: 69 NEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSLDSSFS--GTFKD--------- 117
NE +++ + + LVKL +V E+ P + S G F +
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQ 149
Query: 118 -LLCLHKYSRLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGY 176
+L L +I+RDLK N+++D Q K++DFG A+ T + GT Y
Sbjct: 150 IVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAK-----RVKGRTWXLCGTPEY 204
Query: 177 MSLEYTMSGTVSIKTDVFGFGVLVLKIVCG 206
++ E +S + D + GVL+ ++ G
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 66/150 (44%), Gaps = 17/150 (11%)
Query: 69 NEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSLDSSFS--GTFKD--------- 117
NE +++ + + LVKL +V E++P + S G F +
Sbjct: 83 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQ 142
Query: 118 -LLCLHKYSRLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGY 176
+L L +I+RDLK N+L+D Q +++DFG A+ T + GT Y
Sbjct: 143 IVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEY 197
Query: 177 MSLEYTMSGTVSIKTDVFGFGVLVLKIVCG 206
++ E +S + D + GVL+ ++ G
Sbjct: 198 LAPEIILSKGYNKAVDWWALGVLIYEMAAG 227
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 66/150 (44%), Gaps = 17/150 (11%)
Query: 69 NEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSLDSSFS--GTFKD--------- 117
NE +++ + + LVKL +V E++P + S G F +
Sbjct: 91 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQ 150
Query: 118 -LLCLHKYSRLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGY 176
+L L +I+RDLK N+L+D Q +++DFG A+ T + GT Y
Sbjct: 151 IVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEY 205
Query: 177 MSLEYTMSGTVSIKTDVFGFGVLVLKIVCG 206
++ E +S + D + GVL+ ++ G
Sbjct: 206 LAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 66/150 (44%), Gaps = 17/150 (11%)
Query: 69 NEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSLDSSFS--GTFKD--------- 117
NE +++ + + LVKL +V E++P + S G F +
Sbjct: 91 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQ 150
Query: 118 -LLCLHKYSRLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGY 176
+L L +I+RDLK N+L+D Q +++DFG A+ T + GT Y
Sbjct: 151 IVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEY 205
Query: 177 MSLEYTMSGTVSIKTDVFGFGVLVLKIVCG 206
++ E +S + D + GVL+ ++ G
Sbjct: 206 LAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 67/154 (43%), Gaps = 16/154 (10%)
Query: 66 EFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSL----------DSSFSGTF 115
+ + E ++ + L++ N+++L G L+ E+ P ++ D + T+
Sbjct: 57 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY 116
Query: 116 KDLLC--LHKYSRLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGT 173
L L RVIHRD+K N+LL KI+DFG + V+ + + GT
Sbjct: 117 ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGT 172
Query: 174 YGYMSLEYTMSGTVSIKTDVFGFGVLVLKIVCGK 207
Y+ E K D++ GVL + + GK
Sbjct: 173 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 66/150 (44%), Gaps = 17/150 (11%)
Query: 69 NEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSLDSSFS--GTFKD--------- 117
NE +++ + + LVKL +V E++P + S G F +
Sbjct: 91 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQ 150
Query: 118 -LLCLHKYSRLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGY 176
+L L +I+RDLK N+L+D Q +++DFG A+ T + GT Y
Sbjct: 151 IVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEY 205
Query: 177 MSLEYTMSGTVSIKTDVFGFGVLVLKIVCG 206
++ E +S + D + GVL+ ++ G
Sbjct: 206 LAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 66/150 (44%), Gaps = 17/150 (11%)
Query: 69 NEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSLDSSFS--GTFKD--------- 117
NE +++ + + LVKL +V E++P + S G F +
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQ 149
Query: 118 -LLCLHKYSRLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGY 176
+L L +I+RDLK N+L+D Q +++DFG A+ T + GT Y
Sbjct: 150 IVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEY 204
Query: 177 MSLEYTMSGTVSIKTDVFGFGVLVLKIVCG 206
++ E +S + D + GVL+ ++ G
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 74/154 (48%), Gaps = 22/154 (14%)
Query: 70 EAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKS-------LDSSFSGTFKDLLCLH 122
E +++A + +VKLLG H + ++ EF P + LD + ++C
Sbjct: 66 EIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQ 125
Query: 123 KYSRL------RVIHRDLKASNILLDDQLNTKISDFGMARIFGVN-ESGANTNRIVGTYG 175
L R+IHRDLKA N+L+ + + +++DFG++ N ++ + +GT
Sbjct: 126 MLEALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVS---AKNLKTLQKRDSFIGTPY 182
Query: 176 YMSLEYTMSGTV-----SIKTDVFGFGVLVLKIV 204
+M+ E M T+ K D++ G+ ++++
Sbjct: 183 WMAPEVVMCETMKDTPYDYKADIWSLGITLIEMA 216
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 67/154 (43%), Gaps = 16/154 (10%)
Query: 66 EFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSL----------DSSFSGTF 115
+ + E ++ + L++ N+++L G L+ E+ P ++ D + T+
Sbjct: 55 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY 114
Query: 116 KDLLC--LHKYSRLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGT 173
L L RVIHRD+K N+LL KI+DFG + V+ + + GT
Sbjct: 115 ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTDLCGT 170
Query: 174 YGYMSLEYTMSGTVSIKTDVFGFGVLVLKIVCGK 207
Y+ E K D++ GVL + + GK
Sbjct: 171 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 204
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 67/154 (43%), Gaps = 16/154 (10%)
Query: 66 EFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSL----------DSSFSGTF 115
+ + E ++ + L++ N+++L G L+ E+ P ++ D + T+
Sbjct: 57 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY 116
Query: 116 KDLLC--LHKYSRLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGT 173
L L RVIHRD+K N+LL KI+DFG + V+ + + GT
Sbjct: 117 ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRXXLCGT 172
Query: 174 YGYMSLEYTMSGTVSIKTDVFGFGVLVLKIVCGK 207
Y+ E K D++ GVL + + GK
Sbjct: 173 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 85/196 (43%), Gaps = 26/196 (13%)
Query: 50 EVAIK----RLAWTSGQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNK 105
EVAIK + + +G + QNE K+ +L++ ++++L LV E N
Sbjct: 38 EVAIKMIDKKAMYKAGMVQ-RVQNEVKIHCQLKHPSILELYNYFEDSNYVYLVLEMCHNG 96
Query: 106 SLDSSFSGTFK----------------DLLCLHKYSRLRVIHRDLKASNILLDDQLNTKI 149
++ K +L LH + ++HRDL SN+LL +N KI
Sbjct: 97 EMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSHG---ILHRDLTLSNLLLTRNMNIKI 153
Query: 150 SDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKIVCGKKN 209
+DFG+A + T + GT Y+S E +++DV+ G + ++ G+
Sbjct: 154 ADFGLATQLKMPHEKHYT--LCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPP 211
Query: 210 NKSYHTERPLNLVGIA 225
+ + LN V +A
Sbjct: 212 FDTDTVKNTLNKVVLA 227
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 67/154 (43%), Gaps = 16/154 (10%)
Query: 66 EFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSL----------DSSFSGTF 115
+ + E ++ + L++ N+++L G L+ E+ P ++ D + T+
Sbjct: 54 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY 113
Query: 116 KDLLC--LHKYSRLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGT 173
L L RVIHRD+K N+LL KI+DFG + V+ + + GT
Sbjct: 114 ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRXXLCGT 169
Query: 174 YGYMSLEYTMSGTVSIKTDVFGFGVLVLKIVCGK 207
Y+ E K D++ GVL + + GK
Sbjct: 170 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 66/150 (44%), Gaps = 17/150 (11%)
Query: 69 NEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSLDSSFS--GTFKD--------- 117
NE +++ + + LVKL +V E++P + S G F +
Sbjct: 91 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQ 150
Query: 118 -LLCLHKYSRLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGY 176
+L L +I+RDLK N+L+D Q +++DFG A+ T + GT Y
Sbjct: 151 IVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWTLCGTPEY 205
Query: 177 MSLEYTMSGTVSIKTDVFGFGVLVLKIVCG 206
++ E +S + D + GVL+ ++ G
Sbjct: 206 LAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 67/154 (43%), Gaps = 16/154 (10%)
Query: 66 EFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSL----------DSSFSGTF 115
+ + E ++ + L++ N+++L G L+ E+ P ++ D + T+
Sbjct: 59 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY 118
Query: 116 KDLLC--LHKYSRLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGT 173
L L RVIHRD+K N+LL KI+DFG + V+ + + GT
Sbjct: 119 ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTDLCGT 174
Query: 174 YGYMSLEYTMSGTVSIKTDVFGFGVLVLKIVCGK 207
Y+ E K D++ GVL + + GK
Sbjct: 175 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 208
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 67/154 (43%), Gaps = 16/154 (10%)
Query: 66 EFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSL----------DSSFSGTF 115
+ + E ++ + L++ N+++L G L+ E+ P ++ D + T+
Sbjct: 51 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY 110
Query: 116 KDLLC--LHKYSRLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGT 173
L L RVIHRD+K N+LL KI+DFG + V+ + + GT
Sbjct: 111 ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGT 166
Query: 174 YGYMSLEYTMSGTVSIKTDVFGFGVLVLKIVCGK 207
Y+ E K D++ GVL + + GK
Sbjct: 167 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 200
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 66/150 (44%), Gaps = 17/150 (11%)
Query: 69 NEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSLDSSFS--GTFKD--------- 117
NE +++ + + LVKL +V E++P + S G F +
Sbjct: 111 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQ 170
Query: 118 -LLCLHKYSRLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGY 176
+L L +I+RDLK N+L+D Q +++DFG A+ T + GT Y
Sbjct: 171 IVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEY 225
Query: 177 MSLEYTMSGTVSIKTDVFGFGVLVLKIVCG 206
++ E +S + D + GVL+ ++ G
Sbjct: 226 LAPEIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 67/154 (43%), Gaps = 16/154 (10%)
Query: 66 EFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSL----------DSSFSGTF 115
+ + E ++ + L++ N+++L G L+ E+ P ++ D + T+
Sbjct: 58 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY 117
Query: 116 KDLLC--LHKYSRLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGT 173
L L RVIHRD+K N+LL KI+DFG + V+ + + GT
Sbjct: 118 ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGT 173
Query: 174 YGYMSLEYTMSGTVSIKTDVFGFGVLVLKIVCGK 207
Y+ E K D++ GVL + + GK
Sbjct: 174 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 207
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 67/154 (43%), Gaps = 16/154 (10%)
Query: 66 EFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSL----------DSSFSGTF 115
+ + E ++ + L++ N+++L G L+ E+ P ++ D + T+
Sbjct: 54 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY 113
Query: 116 KDLLC--LHKYSRLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGT 173
L L RVIHRD+K N+LL KI+DFG + V+ + + GT
Sbjct: 114 ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRAALCGT 169
Query: 174 YGYMSLEYTMSGTVSIKTDVFGFGVLVLKIVCGK 207
Y+ E K D++ GVL + + GK
Sbjct: 170 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 84/185 (45%), Gaps = 25/185 (13%)
Query: 38 RVILVGKFPNEQEVAIKRLAWT--SGQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEER 95
R IL GK EVA+K + T + + E +++ L + N+VKL I E+
Sbjct: 34 RHILTGK-----EVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV-IETEKT 87
Query: 96 L-LVYEFMPNKSL-----------DSSFSGTFKDLLCLHKYSRLR-VIHRDLKASNILLD 142
L LV E+ + + F+ ++ +Y + ++HRDLKA N+LLD
Sbjct: 88 LYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLD 147
Query: 143 DQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLE-YTMSGTVSIKTDVFGFGVLVL 201
+N KI+DFG + F G + G+ Y + E + + DV+ GV++
Sbjct: 148 ADMNIKIADFGFSNEFTF---GNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILY 204
Query: 202 KIVCG 206
+V G
Sbjct: 205 TLVSG 209
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 47/84 (55%), Gaps = 2/84 (2%)
Query: 124 YSRLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTM 183
+S V++RDLK N++LD + KI+DFG+ + G+ + GA GT Y++ E
Sbjct: 268 HSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKE-GIKD-GATMKTFCGTPEYLAPEVLE 325
Query: 184 SGTVSIKTDVFGFGVLVLKIVCGK 207
D +G GV++ +++CG+
Sbjct: 326 DNDYGRAVDWWGLGVVMYEMMCGR 349
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 86/183 (46%), Gaps = 34/183 (18%)
Query: 50 EVAIKRLAWTSGQGRVE-FQNEAKLIAKL-QYTNLVKLLGCSIHGEERLLVYE------- 100
+VA+K L T+ E +E K+++ L Q+ N+V LLG HG L++ E
Sbjct: 70 KVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDL 129
Query: 101 --FMPNKS---LDSSFSGTFKDLLCLHKYSRL----------RVIHRDLKASNILLDDQL 145
F+ K+ LD + LH S++ IHRD+ A N+LL +
Sbjct: 130 LNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGH 189
Query: 146 NTKISDFGMARIFGVNESGANTNRIVGTYG-----YMSLEYTMSGTVSIKTDVFGFGVLV 200
KI DFG+AR +N+S N IV +M+ E ++++DV+ +G+L+
Sbjct: 190 VAKIGDFGLARDI-MNDS----NYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILL 244
Query: 201 LKI 203
+I
Sbjct: 245 WEI 247
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 84/185 (45%), Gaps = 25/185 (13%)
Query: 38 RVILVGKFPNEQEVAIKRLAWT--SGQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEER 95
R IL GK EVA+K + T + + E +++ L + N+VKL I E+
Sbjct: 34 RHILTGK-----EVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV-IETEKT 87
Query: 96 L-LVYEFMPNKSL-----------DSSFSGTFKDLLCLHKYSRLR-VIHRDLKASNILLD 142
L LV E+ + + F+ ++ +Y + ++HRDLKA N+LLD
Sbjct: 88 LYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLD 147
Query: 143 DQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLE-YTMSGTVSIKTDVFGFGVLVL 201
+N KI+DFG + F G + G+ Y + E + + DV+ GV++
Sbjct: 148 ADMNIKIADFGFSNEFTF---GNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILY 204
Query: 202 KIVCG 206
+V G
Sbjct: 205 TLVSG 209
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 47/84 (55%), Gaps = 2/84 (2%)
Query: 124 YSRLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTM 183
+S V++RDLK N++LD + KI+DFG+ + G+ + GA GT Y++ E
Sbjct: 265 HSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKE-GIKD-GATMKTFCGTPEYLAPEVLE 322
Query: 184 SGTVSIKTDVFGFGVLVLKIVCGK 207
D +G GV++ +++CG+
Sbjct: 323 DNDYGRAVDWWGLGVVMYEMMCGR 346
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 67/154 (43%), Gaps = 16/154 (10%)
Query: 66 EFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSL----------DSSFSGTF 115
+ + E ++ + L++ N+++L G L+ E+ P ++ D + T+
Sbjct: 57 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY 116
Query: 116 KDLLC--LHKYSRLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGT 173
L L RVIHRD+K N+LL KI+DFG + V+ + + GT
Sbjct: 117 ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRAALCGT 172
Query: 174 YGYMSLEYTMSGTVSIKTDVFGFGVLVLKIVCGK 207
Y+ E K D++ GVL + + GK
Sbjct: 173 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 83/187 (44%), Gaps = 27/187 (14%)
Query: 51 VAIKRLAWTSG-QGRVEFQNEAKLIAKLQYTNLVKLLGC-SIHGEERL-LVYEFMPNKSL 107
VA+K L G Q R +Q E +++ L + ++VK GC GE+ + LV E++P SL
Sbjct: 40 VAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSL 99
Query: 108 DSSFSGT---------FKDLLC--LHKYSRLRVIHRDLKASNILLDDQLNTKISDFGMAR 156
F +C + IHR L A N+LLD+ KI DFG+A+
Sbjct: 100 RDYLPRHCVGLAQLLLFAQQICEGMAYLHAQHYIHRALAARNVLLDNDRLVKIGDFGLAK 159
Query: 157 I-------FGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKIVCGKKN 209
+ V E G + + + E +DV+ FGV + +++ +
Sbjct: 160 AVPEGHEYYRVREDGDS------PVFWYAPECLKECKFYYASDVWSFGVTLYELLTYCDS 213
Query: 210 NKSYHTE 216
N+S HT+
Sbjct: 214 NQSPHTK 220
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 83/187 (44%), Gaps = 27/187 (14%)
Query: 51 VAIKRLAWTSG-QGRVEFQNEAKLIAKLQYTNLVKLLGC-SIHGEERL-LVYEFMPNKSL 107
VA+K L G Q R +Q E +++ L + ++VK GC GE+ + LV E++P SL
Sbjct: 41 VAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSL 100
Query: 108 DSSFSGT---------FKDLLC--LHKYSRLRVIHRDLKASNILLDDQLNTKISDFGMAR 156
F +C + IHR L A N+LLD+ KI DFG+A+
Sbjct: 101 RDYLPRHCVGLAQLLLFAQQICEGMAYLHAQHYIHRALAARNVLLDNDRLVKIGDFGLAK 160
Query: 157 I-------FGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKIVCGKKN 209
+ V E G + + + E +DV+ FGV + +++ +
Sbjct: 161 AVPEGHEYYRVREDGDS------PVFWYAPECLKECKFYYASDVWSFGVTLYELLTYCDS 214
Query: 210 NKSYHTE 216
N+S HT+
Sbjct: 215 NQSPHTK 221
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 86/183 (46%), Gaps = 34/183 (18%)
Query: 50 EVAIKRLAWTSGQGRVE-FQNEAKLIAKL-QYTNLVKLLGCSIHGEERLLVYE------- 100
+VA+K L T+ E +E K+++ L Q+ N+V LLG HG L++ E
Sbjct: 78 KVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDL 137
Query: 101 --FMPNKS---LDSSFSGTFKDLLCLHKYSRL----------RVIHRDLKASNILLDDQL 145
F+ K+ LD + LH S++ IHRD+ A N+LL +
Sbjct: 138 LNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGH 197
Query: 146 NTKISDFGMARIFGVNESGANTNRIVGTYG-----YMSLEYTMSGTVSIKTDVFGFGVLV 200
KI DFG+AR +N+S N IV +M+ E ++++DV+ +G+L+
Sbjct: 198 VAKIGDFGLARDI-MNDS----NYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILL 252
Query: 201 LKI 203
+I
Sbjct: 253 WEI 255
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 75/186 (40%), Gaps = 31/186 (16%)
Query: 49 QEVAIKRL--AWTSGQGRVEFQNEAKLIAKLQYTNLVKLLG-CSIHGEERLLVYEFMPNK 105
+ VA+K L T + R LI + N+V LLG C+ G +++ EF
Sbjct: 58 RTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 117
Query: 106 SLDSSFSGT--------------FKDLLCLHKY--------------SRLRVIHRDLKAS 137
+L + +KD L L + + IHRDL A
Sbjct: 118 NLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAAR 177
Query: 138 NILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFG 197
NILL ++ KI DFG+AR + +M+ E +I++DV+ FG
Sbjct: 178 NILLSEKNVVKICDFGLARDIYKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFG 237
Query: 198 VLVLKI 203
VL+ +I
Sbjct: 238 VLLWEI 243
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 75/186 (40%), Gaps = 31/186 (16%)
Query: 49 QEVAIKRL--AWTSGQGRVEFQNEAKLIAKLQYTNLVKLLG-CSIHGEERLLVYEFMPNK 105
+ VA+K L T + R LI + N+V LLG C+ G +++ EF
Sbjct: 49 RTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 108
Query: 106 SLDSSFSGT--------------FKDLLCLHKY--------------SRLRVIHRDLKAS 137
+L + +KD L L + + IHRDL A
Sbjct: 109 NLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAAR 168
Query: 138 NILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFG 197
NILL ++ KI DFG+AR + +M+ E +I++DV+ FG
Sbjct: 169 NILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFG 228
Query: 198 VLVLKI 203
VL+ +I
Sbjct: 229 VLLWEI 234
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 75/160 (46%), Gaps = 22/160 (13%)
Query: 61 GQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMP----------NKSLDSS 110
G+ R E QN + ++ +++KL + +V E++ N LD
Sbjct: 61 GKIRREIQN----LKLFRHPHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGRLDEK 116
Query: 111 FSGT-FKDLLCLHKY-SRLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTN 168
S F+ +L Y R V+HRDLK N+LLD +N KI+DFG++ + G
Sbjct: 117 ESRRLFQQILSGVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMS---DGEFLR 173
Query: 169 RIVGTYGYMSLEYTMSGTV--SIKTDVFGFGVLVLKIVCG 206
G+ Y + E +SG + + D++ GV++ ++CG
Sbjct: 174 XSCGSPNYAAPE-VISGRLYAGPEVDIWSSGVILYALLCG 212
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 84/185 (45%), Gaps = 25/185 (13%)
Query: 38 RVILVGKFPNEQEVAIKRLAWT--SGQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEER 95
R IL GK EVA+K + T + + E +++ L + N+VKL I E+
Sbjct: 27 RHILTGK-----EVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV-IETEKT 80
Query: 96 L-LVYEFMPNKSL-----------DSSFSGTFKDLLCLHKYSRLR-VIHRDLKASNILLD 142
L LV E+ + + F+ ++ +Y + ++HRDLKA N+LLD
Sbjct: 81 LYLVMEYASGGEVFDYLVAHGWMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLD 140
Query: 143 DQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLE-YTMSGTVSIKTDVFGFGVLVL 201
+N KI+DFG + F G + G+ Y + E + + DV+ GV++
Sbjct: 141 ADMNIKIADFGFSNEFTF---GNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILY 197
Query: 202 KIVCG 206
+V G
Sbjct: 198 TLVSG 202
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 66/150 (44%), Gaps = 17/150 (11%)
Query: 69 NEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSLDSSFS--GTFKD--------- 117
NE +++ + + LVKL +V E+ P + S G F +
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQ 149
Query: 118 -LLCLHKYSRLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGY 176
+L L +I+RDLK N+++D Q +++DFG+A+ T + GT Y
Sbjct: 150 IVLTFEYLHSLDLIYRDLKPENLMIDQQGYIQVTDFGLAK-----RVKGRTWXLCGTPEY 204
Query: 177 MSLEYTMSGTVSIKTDVFGFGVLVLKIVCG 206
++ E +S + D + GVL+ ++ G
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 52/98 (53%), Gaps = 8/98 (8%)
Query: 114 TFKDLL-CLHKYSR-------LRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGA 165
TFKDL+ C ++ +R + IHRDL A N+L+ + KI+DFG+AR +
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYK 214
Query: 166 NTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKI 203
NT +M+ E + ++DV+ FGVL+ +I
Sbjct: 215 NTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 252
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 84/185 (45%), Gaps = 25/185 (13%)
Query: 38 RVILVGKFPNEQEVAIKRLAWT--SGQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEER 95
R IL GK EVA++ + T + + E +++ L + N+VKL I E+
Sbjct: 34 RHILTGK-----EVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV-IETEKT 87
Query: 96 L-LVYEFMPNKSL-----------DSSFSGTFKDLLCLHKYSRLR-VIHRDLKASNILLD 142
L LV E+ + + F+ ++ +Y + ++HRDLKA N+LLD
Sbjct: 88 LYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLD 147
Query: 143 DQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLE-YTMSGTVSIKTDVFGFGVLVL 201
+N KI+DFG + F G + G+ Y + E + + DV+ GV++
Sbjct: 148 ADMNIKIADFGFSNEFTF---GNKLDEFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILY 204
Query: 202 KIVCG 206
+V G
Sbjct: 205 TLVSG 209
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 83/185 (44%), Gaps = 25/185 (13%)
Query: 38 RVILVGKFPNEQEVAIKRLAWT--SGQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEER 95
R IL GK EVA+K + T + + E +++ L + N+VKL I E+
Sbjct: 34 RHILTGK-----EVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV-IETEKT 87
Query: 96 L-LVYEFMPNKSL-----------DSSFSGTFKDLLCLHKYSRLR-VIHRDLKASNILLD 142
L LV E+ + + F+ ++ +Y + ++HRDLKA N+LLD
Sbjct: 88 LYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLD 147
Query: 143 DQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLE-YTMSGTVSIKTDVFGFGVLVL 201
+N KI+DFG + F G + G Y + E + + DV+ GV++
Sbjct: 148 ADMNIKIADFGFSNEFTF---GNKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILY 204
Query: 202 KIVCG 206
+V G
Sbjct: 205 TLVSG 209
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 47/84 (55%), Gaps = 2/84 (2%)
Query: 124 YSRLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTM 183
+S V++RDLK N++LD + KI+DFG+ + G+ + GA GT Y++ E
Sbjct: 127 HSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKE-GIKD-GATMKXFCGTPEYLAPEVLE 184
Query: 184 SGTVSIKTDVFGFGVLVLKIVCGK 207
D +G GV++ +++CG+
Sbjct: 185 DNDYGRAVDWWGLGVVMYEMMCGR 208
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 90/197 (45%), Gaps = 30/197 (15%)
Query: 51 VAIKRLAWTSG-QGRVEFQNEAKLIAKLQYTNLVKLLGC-SIHGEERL-LVYEFMPNKSL 107
VA+K L G Q R ++ E ++ L + +++K GC GE+ L LV E++P SL
Sbjct: 46 VAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSL 105
Query: 108 DSSFSGT---------FKDLLC--LHKYSRLRVIHRDLKASNILLDDQLNTKISDFGMAR 156
F +C + IHR+L A N+LLD+ KI DFG+A+
Sbjct: 106 RDYLPRHSIGLAQLLLFAQQICEGMAYLHSQHYIHRNLAARNVLLDNDRLVKIGDFGLAK 165
Query: 157 I-------FGVNESGANTNRIVGTYGYMSL-EYTMSGTVSIKTDVFGFGVLVLKIVCGKK 208
+ V E G + V Y L EY +DV+ FGV + +++
Sbjct: 166 AVPEGHEYYRVREDGDSP---VFWYAPECLKEYKF----YYASDVWSFGVTLYELLTHCD 218
Query: 209 NNKSYHTERPLNLVGIA 225
+++S T + L L+GIA
Sbjct: 219 SSQSPPT-KFLELIGIA 234
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 75/186 (40%), Gaps = 31/186 (16%)
Query: 49 QEVAIKRL--AWTSGQGRVEFQNEAKLIAKLQYTNLVKLLG-CSIHGEERLLVYEFMPNK 105
+ VA+K L T + R LI + N+V LLG C+ G +++ EF
Sbjct: 49 RTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFG 108
Query: 106 SLDSSFSGT--------------FKDLLCLHKY--------------SRLRVIHRDLKAS 137
+L + +KD L L + + IHRDL A
Sbjct: 109 NLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAAR 168
Query: 138 NILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFG 197
NILL ++ KI DFG+AR + +M+ E +I++DV+ FG
Sbjct: 169 NILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFG 228
Query: 198 VLVLKI 203
VL+ +I
Sbjct: 229 VLLWEI 234
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 64/150 (42%), Gaps = 17/150 (11%)
Query: 69 NEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSLDSSFS--GTFKD--------- 117
NE ++ + + LVKL +V E+ P + S G F +
Sbjct: 91 NEKRIQQAVNFPFLVKLEFSFKDNSNLYMVLEYAPGGEMFSHLRRIGRFSEPHARFYAAQ 150
Query: 118 -LLCLHKYSRLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGY 176
+L L +I+RDLK N+L+D Q K++DFG A+ T + GT Y
Sbjct: 151 IVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAK-----RVKGRTWXLCGTPEY 205
Query: 177 MSLEYTMSGTVSIKTDVFGFGVLVLKIVCG 206
++ E +S + D + GVL+ ++ G
Sbjct: 206 LAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 96/222 (43%), Gaps = 31/222 (13%)
Query: 50 EVAIKRLAWTSGQGRVE-FQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSLD 108
+VAIK L + + E EA+++ +L +V+L+G E +LV E L
Sbjct: 39 DVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLVMEMAGGGPLH 97
Query: 109 SSFSGTFKDLLC------LHKYS-------RLRVIHRDLKASNILLDDQLNTKISDFGMA 155
G +++ LH+ S +HRDL A N+LL ++ KISDFG++
Sbjct: 98 KFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRHYAKISDFGLS 157
Query: 156 RIFGVNESGANTNRIVGTY--GYMSLEYTMSGTVSIKTDVFGFGVLVLKIVC-GKKNNKS 212
+ G ++S T R G + + + E S ++DV+ +GV + + + G+K K
Sbjct: 158 KALGADDS-YYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKK 216
Query: 213 YHTERPLNLVGIAWQLWNEGKDLELIDLTLDGSCPPNEDAFL 254
+ + +GK +E CPP A +
Sbjct: 217 MKGPEVMAFI-------EQGKRME-----CPPECPPELYALM 246
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 49/88 (55%), Gaps = 2/88 (2%)
Query: 119 LCLHKYSRLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMS 178
L L L +I+RDLK NILLD++ + K++DFG+++ +E A + GT YM+
Sbjct: 137 LALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYS--FCGTVEYMA 194
Query: 179 LEYTMSGTVSIKTDVFGFGVLVLKIVCG 206
E + D + FGVL+ +++ G
Sbjct: 195 PEVVNRRGHTQSADWWSFGVLMFEMLTG 222
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 47/84 (55%), Gaps = 2/84 (2%)
Query: 124 YSRLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTM 183
+S V++RDLK N++LD + KI+DFG+ + G+ + GA GT Y++ E
Sbjct: 125 HSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKE-GIKD-GATMKXFCGTPEYLAPEVLE 182
Query: 184 SGTVSIKTDVFGFGVLVLKIVCGK 207
D +G GV++ +++CG+
Sbjct: 183 DNDYGRAVDWWGLGVVMYEMMCGR 206
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 47/84 (55%), Gaps = 2/84 (2%)
Query: 124 YSRLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTM 183
+S V++RDLK N++LD + KI+DFG+ + G+ + GA GT Y++ E
Sbjct: 126 HSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKE-GIKD-GATMKXFCGTPEYLAPEVLE 183
Query: 184 SGTVSIKTDVFGFGVLVLKIVCGK 207
D +G GV++ +++CG+
Sbjct: 184 DNDYGRAVDWWGLGVVMYEMMCGR 207
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 90/197 (45%), Gaps = 30/197 (15%)
Query: 51 VAIKRLAWTSG-QGRVEFQNEAKLIAKLQYTNLVKLLGC-SIHGEERL-LVYEFMPNKSL 107
VA+K L G Q R ++ E ++ L + +++K GC GE+ L LV E++P SL
Sbjct: 46 VAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSL 105
Query: 108 DSSFSGT---------FKDLLC--LHKYSRLRVIHRDLKASNILLDDQLNTKISDFGMAR 156
F +C + IHR+L A N+LLD+ KI DFG+A+
Sbjct: 106 RDYLPRHSIGLAQLLLFAQQICEGMAYLHAQHYIHRNLAARNVLLDNDRLVKIGDFGLAK 165
Query: 157 I-------FGVNESGANTNRIVGTYGYMSL-EYTMSGTVSIKTDVFGFGVLVLKIVCGKK 208
+ V E G + V Y L EY +DV+ FGV + +++
Sbjct: 166 AVPEGHEYYRVREDGDSP---VFWYAPECLKEYKF----YYASDVWSFGVTLYELLTHCD 218
Query: 209 NNKSYHTERPLNLVGIA 225
+++S T + L L+GIA
Sbjct: 219 SSQSPPT-KFLELIGIA 234
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 88/193 (45%), Gaps = 48/193 (24%)
Query: 50 EVAIKRLAWTSGQGRVE-FQNEAKLIAKL-QYTNLVKLLGCSIHGEERLLV--------- 98
+VA+K L T+ E +E K+++ L Q+ N+V LLG HG L++
Sbjct: 78 KVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDL 137
Query: 99 -------------YEFMPNKSLDSSFSGTFKDLLCLHKYSRL----------RVIHRDLK 135
Y + P+ + + S +DLL H S++ IHRD+
Sbjct: 138 LNFLRRKRPPGLEYSYNPSHNPEEQLSS--RDLL--HFSSQVAQGMAFLASKNCIHRDVA 193
Query: 136 ASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYG-----YMSLEYTMSGTVSIK 190
A N+LL + KI DFG+AR +N+S N IV +M+ E +++
Sbjct: 194 ARNVLLTNGHVAKIGDFGLARDI-MNDS----NYIVKGNARLPVKWMAPESIFDCVYTVQ 248
Query: 191 TDVFGFGVLVLKI 203
+DV+ +G+L+ +I
Sbjct: 249 SDVWSYGILLWEI 261
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 70/158 (44%), Gaps = 24/158 (15%)
Query: 67 FQNEAKLIAKLQYTNLVKL-------------LGCSIHGE--ERLLVYEFMPNKSLDSSF 111
+NE ++ K+++ N+V L + GE +R++ F K +
Sbjct: 67 IENEIAVLRKIKHENIVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLI 126
Query: 112 SGTFKDLLCLHKYSRLRVIHRDLKASNILL---DDQLNTKISDFGMARIFGVNESGANTN 168
+ LH R+ ++HRDLK N+L D++ ISDFG++++ G G +
Sbjct: 127 RQVLDAVYYLH---RMGIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEG---KGDVMS 180
Query: 169 RIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKIVCG 206
GT GY++ E S D + GV+ ++CG
Sbjct: 181 TACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 218
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 75/186 (40%), Gaps = 31/186 (16%)
Query: 49 QEVAIKRL--AWTSGQGRVEFQNEAKLIAKLQYTNLVKLLG-CSIHGEERLLVYEFMPNK 105
+ VA+K L T + R LI + N+V LLG C+ G +++ EF
Sbjct: 58 RTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 117
Query: 106 SLDSSFSGT--------------FKDLLCLHKY--------------SRLRVIHRDLKAS 137
+L + +KD L L + + IHRDL A
Sbjct: 118 NLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAAR 177
Query: 138 NILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFG 197
NILL ++ KI DFG+AR + +M+ E +I++DV+ FG
Sbjct: 178 NILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFG 237
Query: 198 VLVLKI 203
VL+ +I
Sbjct: 238 VLLWEI 243
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 65/150 (43%), Gaps = 17/150 (11%)
Query: 69 NEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSLDSSFS--GTFKD--------- 117
NE +++ + + LVKL +V E+ P + S G F +
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQ 149
Query: 118 -LLCLHKYSRLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGY 176
+L L +I+RDLK N+++D Q +++DFG A+ T + GT Y
Sbjct: 150 IVLTFEYLHSLDLIYRDLKPENLMIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEY 204
Query: 177 MSLEYTMSGTVSIKTDVFGFGVLVLKIVCG 206
++ E +S + D + GVL+ ++ G
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 84/185 (45%), Gaps = 25/185 (13%)
Query: 38 RVILVGKFPNEQEVAIKRLAWT--SGQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEER 95
R IL GK EVA++ + T + + E +++ L + N+VKL I E+
Sbjct: 34 RHILTGK-----EVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV-IETEKT 87
Query: 96 L-LVYEFMPNKSL-----------DSSFSGTFKDLLCLHKYSRLR-VIHRDLKASNILLD 142
L LV E+ + + F+ ++ +Y + ++HRDLKA N+LLD
Sbjct: 88 LYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLD 147
Query: 143 DQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLE-YTMSGTVSIKTDVFGFGVLVL 201
+N KI+DFG + F G + G+ Y + E + + DV+ GV++
Sbjct: 148 ADMNIKIADFGFSNEFTF---GNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILY 204
Query: 202 KIVCG 206
+V G
Sbjct: 205 TLVSG 209
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 77/187 (41%), Gaps = 40/187 (21%)
Query: 48 EQEVAIKRLAWTSGQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSL 107
E+ VAIK+L+ FQN+ AK Y LV L+ C H L+ F P KSL
Sbjct: 43 ERNVAIKKLSRP-------FQNQTH--AKRAYRELV-LMKCVNHKNIIGLLNVFTPQKSL 92
Query: 108 DS--------------------------SFSGTFKDLLCLHKY-SRLRVIHRDLKASNIL 140
+ S +LC K+ +IHRDLK SNI+
Sbjct: 93 EEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIV 152
Query: 141 LDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLV 200
+ KI DFG+AR G S T +V Y Y + E + D++ G ++
Sbjct: 153 VKSDCTLKILDFGLARTAGT--SFMMTPYVVTRY-YRAPEVILGMGYKENVDLWSVGCIM 209
Query: 201 LKIVCGK 207
++VC K
Sbjct: 210 GEMVCHK 216
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 77/187 (41%), Gaps = 40/187 (21%)
Query: 48 EQEVAIKRLAWTSGQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSL 107
E+ VAIK+L+ FQN+ AK Y LV L+ C H L+ F P KSL
Sbjct: 54 ERNVAIKKLSRP-------FQNQTH--AKRAYRELV-LMKCVNHKNIIGLLNVFTPQKSL 103
Query: 108 DS--------------------------SFSGTFKDLLCLHKY-SRLRVIHRDLKASNIL 140
+ S +LC K+ +IHRDLK SNI+
Sbjct: 104 EEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIV 163
Query: 141 LDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLV 200
+ KI DFG+AR G S T +V Y Y + E + D++ G ++
Sbjct: 164 VKSDCTLKILDFGLARTAGT--SFMMTPYVVTRY-YRAPEVILGMGYKENVDLWSVGCIM 220
Query: 201 LKIVCGK 207
++VC K
Sbjct: 221 GEMVCHK 227
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 74/184 (40%), Gaps = 31/184 (16%)
Query: 51 VAIKRL--AWTSGQGRVEFQNEAKLIAKLQYTNLVKLLG-CSIHGEERLLVYEFMPNKSL 107
VA+K L T + R LI + N+V LLG C+ G +++ EF +L
Sbjct: 62 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 121
Query: 108 DSSFSGT--------------FKDLLCLHKY--------------SRLRVIHRDLKASNI 139
+ +KD L L + + IHRDL A NI
Sbjct: 122 STYLRSKRNEFVPYKEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNI 181
Query: 140 LLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVL 199
LL ++ KI DFG+AR + +M+ E +I++DV+ FGVL
Sbjct: 182 LLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVL 241
Query: 200 VLKI 203
+ +I
Sbjct: 242 LWEI 245
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 55/99 (55%), Gaps = 10/99 (10%)
Query: 114 TFKDLL-CLHKYSR-------LRVIHRDLKASNILLDDQLNTKISDFGMAR-IFGVNESG 164
TFKDL+ C ++ +R + IHRDL A N+L+ + KI+DFG+AR I ++
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXK 214
Query: 165 ANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKI 203
TN + +M+ E + ++DV+ FGVL+ +I
Sbjct: 215 KTTNGRLPV-KWMAPEALFDRVYTHQSDVWSFGVLMWEI 252
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 49/88 (55%), Gaps = 2/88 (2%)
Query: 119 LCLHKYSRLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMS 178
L L L +I+RDLK NILLD++ + K++DFG+++ +E A + GT YM+
Sbjct: 138 LALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYS--FCGTVEYMA 195
Query: 179 LEYTMSGTVSIKTDVFGFGVLVLKIVCG 206
E + D + FGVL+ +++ G
Sbjct: 196 PEVVNRRGHTQSADWWSFGVLMFEMLTG 223
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 51/94 (54%), Gaps = 2/94 (2%)
Query: 129 VIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVS 188
V++RD+K N++LD + KI+DFG+ + G+++ GA GT Y++ E
Sbjct: 126 VVYRDIKLENLMLDKDGHIKITDFGLCKE-GISD-GATMKXFCGTPEYLAPEVLEDNDYG 183
Query: 189 IKTDVFGFGVLVLKIVCGKKNNKSYHTERPLNLV 222
D +G GV++ +++CG+ + ER L+
Sbjct: 184 RAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELI 217
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 68/154 (44%), Gaps = 15/154 (9%)
Query: 66 EFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSLDSSFSGTFKDLL------ 119
EF EA ++ ++++ NLV+LLG ++ EFM +L + +
Sbjct: 301 EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLL 360
Query: 120 --------CLHKYSRLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIV 171
+ + IHR+L A N L+ + K++DFG++R+ + A+
Sbjct: 361 YMATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF 420
Query: 172 GTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKIVC 205
+ + E SIK+DV+ FGVL+ +I
Sbjct: 421 -PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 453
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 67/153 (43%), Gaps = 16/153 (10%)
Query: 66 EFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSL----------DSSFSGTF 115
+ + E ++ + L++ N+++L G L+ E+ P ++ D + T+
Sbjct: 58 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATY 117
Query: 116 KDLLC--LHKYSRLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGT 173
L L RVIHRD+K N+LL KI+DFG + V+ + + + GT
Sbjct: 118 ITELANALSYCHSKRVIHRDIKPENLLLGSNGELKIADFG----WSVHAPSSRRDTLCGT 173
Query: 174 YGYMSLEYTMSGTVSIKTDVFGFGVLVLKIVCG 206
Y+ E K D++ GVL + + G
Sbjct: 174 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG 206
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 51/94 (54%), Gaps = 2/94 (2%)
Query: 129 VIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVS 188
V++RD+K N++LD + KI+DFG+ + G+++ GA GT Y++ E
Sbjct: 131 VVYRDIKLENLMLDKDGHIKITDFGLCKE-GISD-GATMKXFCGTPEYLAPEVLEDNDYG 188
Query: 189 IKTDVFGFGVLVLKIVCGKKNNKSYHTERPLNLV 222
D +G GV++ +++CG+ + ER L+
Sbjct: 189 RAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELI 222
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 68/154 (44%), Gaps = 15/154 (9%)
Query: 66 EFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSL--------DSSFSGTFKD 117
EF EA ++ ++++ NLV+LLG ++ EFM +L S
Sbjct: 262 EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLL 321
Query: 118 LLCLHKYSRLR------VIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIV 171
+ S + IHR+L A N L+ + K++DFG++R+ + A+
Sbjct: 322 YMATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF 381
Query: 172 GTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKIVC 205
+ + E SIK+DV+ FGVL+ +I
Sbjct: 382 PI-KWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 414
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 55/99 (55%), Gaps = 10/99 (10%)
Query: 114 TFKDLL-CLHKYSR-------LRVIHRDLKASNILLDDQLNTKISDFGMAR-IFGVNESG 164
TFKDL+ C ++ +R + IHRDL A N+L+ + KI+DFG+AR I ++
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXK 214
Query: 165 ANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKI 203
TN + +M+ E + ++DV+ FGVL+ +I
Sbjct: 215 KTTNGRLPV-KWMAPEALFDRVYTHQSDVWSFGVLMWEI 252
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 49/88 (55%), Gaps = 2/88 (2%)
Query: 119 LCLHKYSRLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMS 178
L L L +I+RDLK NILLD++ + K++DFG+++ +E A + GT YM+
Sbjct: 137 LALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYS--FCGTVEYMA 194
Query: 179 LEYTMSGTVSIKTDVFGFGVLVLKIVCG 206
E + D + FGVL+ +++ G
Sbjct: 195 PEVVNRRGHTQSADWWSFGVLMFEMLTG 222
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 75/159 (47%), Gaps = 25/159 (15%)
Query: 66 EFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSL-----------DSSFSGT 114
E NE L+ L + N++KL + LV EF L + +
Sbjct: 92 EIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAANI 151
Query: 115 FKDLLC----LHKYSRLRVIHRDLKASNILLDDQ---LNTKISDFGMARIFGVNESGANT 167
K +L LHK++ ++HRD+K NILL+++ LN KI DFG++ F + +
Sbjct: 152 MKQILSGICYLHKHN---IVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDR 208
Query: 168 NRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKIVCG 206
+GT Y++ E + + K DV+ GV++ ++CG
Sbjct: 209 ---LGTAYYIAPE-VLKKKYNEKCDVWSCGVIMYILLCG 243
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 73/158 (46%), Gaps = 23/158 (14%)
Query: 67 FQNEAKLIAKLQYTNLVKLLGCSIHGE-ERLLVYEFMPNKSLDSSFSGTFKDLLCLHKYS 125
FQ E++L ++Y N L+ H + +R L E S + S L L+
Sbjct: 79 FQTESRLFFVIEYVNGGDLM---FHMQRQRKLPEEHARFYSAEIS--------LALNYLH 127
Query: 126 RLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSG 185
+I+RDLK N+LLD + + K++D+GM + G+ G T+ GT Y++ E
Sbjct: 128 ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKE-GLR-PGDTTSXFCGTPNYIAPEILRGE 185
Query: 186 TVSIKTDVFGFGVLVLKIVCGKKNNKSYHTERPLNLVG 223
D + GVL+ +++ G+ P ++VG
Sbjct: 186 DYGFSVDWWALGVLMFEMMAGRS---------PFDIVG 214
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 64/150 (42%), Gaps = 17/150 (11%)
Query: 69 NEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSLDSSFS--GTFKD--------- 117
NE +++ + + L KL +V E+ P + S G F +
Sbjct: 91 NEKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQ 150
Query: 118 -LLCLHKYSRLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGY 176
+L L +I+RDLK N+++D Q K++DFG A+ T + GT Y
Sbjct: 151 IVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAK-----RVKGRTWXLCGTPEY 205
Query: 177 MSLEYTMSGTVSIKTDVFGFGVLVLKIVCG 206
++ E +S + D + GVL+ ++ G
Sbjct: 206 LAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 68/154 (44%), Gaps = 15/154 (9%)
Query: 66 EFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSLDSSFSGTFKDLL------ 119
EF EA ++ ++++ NLV+LLG ++ EFM +L + +
Sbjct: 259 EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLL 318
Query: 120 --------CLHKYSRLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIV 171
+ + IHR+L A N L+ + K++DFG++R+ + A+
Sbjct: 319 YMATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF 378
Query: 172 GTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKIVC 205
+ + E SIK+DV+ FGVL+ +I
Sbjct: 379 PI-KWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 411
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 73/158 (46%), Gaps = 23/158 (14%)
Query: 67 FQNEAKLIAKLQYTNLVKLLGCSIHGE-ERLLVYEFMPNKSLDSSFSGTFKDLLCLHKYS 125
FQ E++L ++Y N L+ H + +R L E S + S L L+
Sbjct: 122 FQTESRLFFVIEYVNGGDLM---FHMQRQRKLPEEHARFYSAEIS--------LALNYLH 170
Query: 126 RLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSG 185
+I+RDLK N+LLD + + K++D+GM + G+ G T+ GT Y++ E
Sbjct: 171 ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKE-GLR-PGDTTSTFCGTPNYIAPEILRGE 228
Query: 186 TVSIKTDVFGFGVLVLKIVCGKKNNKSYHTERPLNLVG 223
D + GVL+ +++ G+ P ++VG
Sbjct: 229 DYGFSVDWWALGVLMFEMMAGRS---------PFDIVG 257
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 11/85 (12%)
Query: 129 VIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYM-------SLEY 181
++HRDLK NILLDD + ++SDFG + E G + GT GY+ S++
Sbjct: 221 IVHRDLKPENILLDDNMQIRLSDFGFSCHL---EPGEKLRELCGTPGYLAPEILKCSMDE 277
Query: 182 TMSGTVSIKTDVFGFGVLVLKIVCG 206
T G + D++ GV++ ++ G
Sbjct: 278 THPG-YGKEVDLWACGVILFTLLAG 301
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 89/197 (45%), Gaps = 30/197 (15%)
Query: 51 VAIKRLAWTSG-QGRVEFQNEAKLIAKLQYTNLVKLLGC-SIHGEERL-LVYEFMPNKSL 107
VA+K L +G Q R ++ E ++ L + +++K GC G L LV E++P SL
Sbjct: 63 VAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSL 122
Query: 108 DSSFSGT---------FKDLLC--LHKYSRLRVIHRDLKASNILLDDQLNTKISDFGMAR 156
F +C + IHRDL A N+LLD+ KI DFG+A+
Sbjct: 123 RDYLPRHSIGLAQLLLFAQQICEGMAYLHAQHYIHRDLAARNVLLDNDRLVKIGDFGLAK 182
Query: 157 I-------FGVNESGANTNRIVGTYGYMSL-EYTMSGTVSIKTDVFGFGVLVLKIVCGKK 208
+ V E G + V Y L EY +DV+ FGV + +++
Sbjct: 183 AVPEGHEXYRVREDG---DSPVFWYAPECLKEYKF----YYASDVWSFGVTLYELLTHCD 235
Query: 209 NNKSYHTERPLNLVGIA 225
+++S T + L L+GIA
Sbjct: 236 SSQSPPT-KFLELIGIA 251
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 64/150 (42%), Gaps = 17/150 (11%)
Query: 69 NEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSLDSSFS--GTFKD--------- 117
NE +++ + + L KL +V E+ P + S G F +
Sbjct: 91 NEKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQ 150
Query: 118 -LLCLHKYSRLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGY 176
+L L +I+RDLK N+++D Q K++DFG A+ T + GT Y
Sbjct: 151 IVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAK-----RVKGRTWXLCGTPEY 205
Query: 177 MSLEYTMSGTVSIKTDVFGFGVLVLKIVCG 206
++ E +S + D + GVL+ ++ G
Sbjct: 206 LAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 73/158 (46%), Gaps = 23/158 (14%)
Query: 67 FQNEAKLIAKLQYTNLVKLLGCSIHGE-ERLLVYEFMPNKSLDSSFSGTFKDLLCLHKYS 125
FQ E++L ++Y N L+ H + +R L E S + S L L+
Sbjct: 75 FQTESRLFFVIEYVNGGDLM---FHMQRQRKLPEEHARFYSAEIS--------LALNYLH 123
Query: 126 RLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSG 185
+I+RDLK N+LLD + + K++D+GM + G+ G T+ GT Y++ E
Sbjct: 124 ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKE-GLR-PGDTTSXFCGTPNYIAPEILRGE 181
Query: 186 TVSIKTDVFGFGVLVLKIVCGKKNNKSYHTERPLNLVG 223
D + GVL+ +++ G+ P ++VG
Sbjct: 182 DYGFSVDWWALGVLMFEMMAGRS---------PFDIVG 210
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 64/150 (42%), Gaps = 17/150 (11%)
Query: 69 NEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSLDSSFS--GTFKD--------- 117
NE +++ + + L KL +V E+ P + S G F +
Sbjct: 91 NEKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQ 150
Query: 118 -LLCLHKYSRLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGY 176
+L L +I+RDLK N+++D Q K++DFG A+ T + GT Y
Sbjct: 151 IVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAK-----RVKGRTWXLCGTPEY 205
Query: 177 MSLEYTMSGTVSIKTDVFGFGVLVLKIVCG 206
++ E +S + D + GVL+ ++ G
Sbjct: 206 LAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 67/154 (43%), Gaps = 16/154 (10%)
Query: 66 EFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSL----------DSSFSGTF 115
+ + E ++ + L++ N+++L G L+ E+ P ++ D + T+
Sbjct: 56 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY 115
Query: 116 KDLLC--LHKYSRLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGT 173
L L RVIHRD+K N+LL KI++FG + V+ + + GT
Sbjct: 116 ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIANFG----WSVHAPSSRRTTLCGT 171
Query: 174 YGYMSLEYTMSGTVSIKTDVFGFGVLVLKIVCGK 207
Y+ E K D++ GVL + + GK
Sbjct: 172 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 205
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 85/178 (47%), Gaps = 28/178 (15%)
Query: 49 QEVAIKRLAW------TSGQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFM 102
Q VAIK++ G R + E KL+ +L + N++ LL H LV++FM
Sbjct: 36 QIVAIKKIKLGHRSEAKDGINRTALR-EIKLLQELSHPNIIGLLDAFGHKSNISLVFDFM 94
Query: 103 PN---------------KSLDSSFSGTFKDLLCLHKYSRLRVIHRDLKASNILLDDQLNT 147
+ + T + L LH++ ++HRDLK +N+LLD+
Sbjct: 95 ETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHW---ILHRDLKPNNLLLDENGVL 151
Query: 148 KISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTV-SIKTDVFGFGVLVLKIV 204
K++DFG+A+ FG + + A +++V T Y + E + + D++ G ++ +++
Sbjct: 152 KLADFGLAKSFG-SPNRAYXHQVV-TRWYRAPELLFGARMYGVGVDMWAVGCILAELL 207
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 73/158 (46%), Gaps = 23/158 (14%)
Query: 67 FQNEAKLIAKLQYTNLVKLLGCSIHGE-ERLLVYEFMPNKSLDSSFSGTFKDLLCLHKYS 125
FQ E++L ++Y N L+ H + +R L E S + S L L+
Sbjct: 90 FQTESRLFFVIEYVNGGDLM---FHMQRQRKLPEEHARFYSAEIS--------LALNYLH 138
Query: 126 RLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSG 185
+I+RDLK N+LLD + + K++D+GM + G+ G T+ GT Y++ E
Sbjct: 139 ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKE-GLR-PGDTTSXFCGTPNYIAPEILRGE 196
Query: 186 TVSIKTDVFGFGVLVLKIVCGKKNNKSYHTERPLNLVG 223
D + GVL+ +++ G+ P ++VG
Sbjct: 197 DYGFSVDWWALGVLMFEMMAGRS---------PFDIVG 225
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 75/186 (40%), Gaps = 31/186 (16%)
Query: 49 QEVAIKRL--AWTSGQGRVEFQNEAKLIAKLQYTNLVKLLG-CSIHGEERLLVYEFMPNK 105
+ VA+K L T + R LI + N+V LLG C+ G +++ EF
Sbjct: 95 RTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 154
Query: 106 SLDSSFSGT--------------FKDLLCLHKY--------------SRLRVIHRDLKAS 137
+L + +KD L L + + IHRDL A
Sbjct: 155 NLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAAR 214
Query: 138 NILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFG 197
NILL ++ KI DFG+AR + +M+ E +I++DV+ FG
Sbjct: 215 NILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFG 274
Query: 198 VLVLKI 203
VL+ +I
Sbjct: 275 VLLWEI 280
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 91/192 (47%), Gaps = 36/192 (18%)
Query: 51 VAIKRLAWTSGQGRVE-------FQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMP 103
VAIK L +G E FQ E +++ L + N+VKL G +H R +V EF+P
Sbjct: 47 VAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGL-MHNPPR-MVMEFVP 104
Query: 104 -----NKSLDSSFSGTFK-------DLLCLHKYSRLR---VIHRDLKASNILL-----DD 143
++ LD + + D+ +Y + + ++HRDL++ NI L +
Sbjct: 105 CGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENA 164
Query: 144 QLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSI--KTDVFGFGVLVL 201
+ K++DFG+++ +S + + ++G + +M+ E + S K D + F +++
Sbjct: 165 PVCAKVADFGLSQ-----QSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILY 219
Query: 202 KIVCGKKNNKSY 213
I+ G+ Y
Sbjct: 220 TILTGEGPFDEY 231
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 51/94 (54%), Gaps = 2/94 (2%)
Query: 129 VIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVS 188
V++RD+K N++LD + KI+DFG+ + G+++ GA GT Y++ E
Sbjct: 126 VVYRDIKLENLMLDKDGHIKITDFGLCKE-GISD-GATMKXFCGTPEYLAPEVLEDNDYG 183
Query: 189 IKTDVFGFGVLVLKIVCGKKNNKSYHTERPLNLV 222
D +G GV++ +++CG+ + ER L+
Sbjct: 184 RAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELI 217
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 42/78 (53%), Gaps = 2/78 (2%)
Query: 129 VIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVS 188
+I+RDLK N+LLD + + K++DFGM + N G T GT Y++ E
Sbjct: 145 IIYRDLKLDNVLLDHEGHCKLADFGMCKEGICN--GVTTATFCGTPDYIAPEILQEMLYG 202
Query: 189 IKTDVFGFGVLVLKIVCG 206
D + GVL+ +++CG
Sbjct: 203 PAVDWWAMGVLLYEMLCG 220
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 48/80 (60%), Gaps = 4/80 (5%)
Query: 128 RVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTV 187
+++HRD+K SNIL++ + K+ DFG++ ++E N VGT YMS E
Sbjct: 128 KIMHRDVKPSNILVNSRGEIKLCDFGVSGQL-IDEM---ANEFVGTRSYMSPERLQGTHY 183
Query: 188 SIKTDVFGFGVLVLKIVCGK 207
S+++D++ G+ ++++ G+
Sbjct: 184 SVQSDIWSMGLSLVEMAVGR 203
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 51/94 (54%), Gaps = 2/94 (2%)
Query: 129 VIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVS 188
V++RD+K N++LD + KI+DFG+ + G+++ GA GT Y++ E
Sbjct: 126 VVYRDIKLENLMLDKDGHIKITDFGLCKE-GISD-GATMKXFCGTPEYLAPEVLEDNDYG 183
Query: 189 IKTDVFGFGVLVLKIVCGKKNNKSYHTERPLNLV 222
D +G GV++ +++CG+ + ER L+
Sbjct: 184 RAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELI 217
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 75/186 (40%), Gaps = 31/186 (16%)
Query: 49 QEVAIKRL--AWTSGQGRVEFQNEAKLIAKLQYTNLVKLLG-CSIHGEERLLVYEFMPNK 105
+ VA+K L T + R LI + N+V LLG C+ G +++ EF
Sbjct: 49 RTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFG 108
Query: 106 SLDSSFSGT--------------FKDLLCLHKY--------------SRLRVIHRDLKAS 137
+L + +KD L L + + IHRDL A
Sbjct: 109 NLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAAR 168
Query: 138 NILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFG 197
NILL ++ KI DFG+AR + +M+ E +I++DV+ FG
Sbjct: 169 NILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFG 228
Query: 198 VLVLKI 203
VL+ +I
Sbjct: 229 VLLWEI 234
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 76/187 (40%), Gaps = 40/187 (21%)
Query: 48 EQEVAIKRLAWTSGQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSL 107
E+ VAIK+L+ FQN+ AK Y LV L+ C H L+ F P KSL
Sbjct: 49 ERNVAIKKLSRP-------FQNQTH--AKRAYRELV-LMKCVNHKNIIGLLNVFTPQKSL 98
Query: 108 DS--------------------------SFSGTFKDLLCLHKY-SRLRVIHRDLKASNIL 140
+ S +LC K+ +IHRDLK SNI+
Sbjct: 99 EEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIV 158
Query: 141 LDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLV 200
+ KI DFG+AR G S +V Y Y + E + D++ G ++
Sbjct: 159 VKSDCTLKILDFGLARTAGT--SFMMEPEVVTRY-YRAPEVILGMGYKENVDIWSVGCIM 215
Query: 201 LKIVCGK 207
++VC K
Sbjct: 216 GEMVCHK 222
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 50/80 (62%), Gaps = 4/80 (5%)
Query: 128 RVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTV 187
+++HRD+K SNIL++ + K+ DFG++ + +S AN+ VGT YMS E
Sbjct: 187 KIMHRDVKPSNILVNSRGEIKLCDFGVSG--QLIDSMANS--FVGTRSYMSPERLQGTHY 242
Query: 188 SIKTDVFGFGVLVLKIVCGK 207
S+++D++ G+ ++++ G+
Sbjct: 243 SVQSDIWSMGLSLVEMAVGR 262
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 75/186 (40%), Gaps = 31/186 (16%)
Query: 49 QEVAIKRL--AWTSGQGRVEFQNEAKLIAKLQYTNLVKLLG-CSIHGEERLLVYEFMPNK 105
+ VA+K L T + R LI + N+V LLG C+ G +++ EF
Sbjct: 49 RTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFG 108
Query: 106 SLDSSFSGT--------------FKDLLCLHKY--------------SRLRVIHRDLKAS 137
+L + +KD L L + + IHRDL A
Sbjct: 109 NLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAAR 168
Query: 138 NILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFG 197
NILL ++ KI DFG+AR + +M+ E +I++DV+ FG
Sbjct: 169 NILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFG 228
Query: 198 VLVLKI 203
VL+ +I
Sbjct: 229 VLLWEI 234
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 49/88 (55%), Gaps = 2/88 (2%)
Query: 119 LCLHKYSRLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMS 178
L L L +I+RDLK NILLD++ + K++DFG+++ +E A + GT YM+
Sbjct: 141 LGLDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYS--FCGTVEYMA 198
Query: 179 LEYTMSGTVSIKTDVFGFGVLVLKIVCG 206
E S D + +GVL+ +++ G
Sbjct: 199 PEVVNRQGHSHSADWWSYGVLMFEMLTG 226
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 51/94 (54%), Gaps = 2/94 (2%)
Query: 129 VIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVS 188
V++RD+K N++LD + KI+DFG+ + G+++ GA GT Y++ E
Sbjct: 129 VVYRDIKLENLMLDKDGHIKITDFGLCKE-GISD-GATMKTFCGTPEYLAPEVLEDNDYG 186
Query: 189 IKTDVFGFGVLVLKIVCGKKNNKSYHTERPLNLV 222
D +G GV++ +++CG+ + ER L+
Sbjct: 187 RAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELI 220
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 67/154 (43%), Gaps = 16/154 (10%)
Query: 66 EFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSL----------DSSFSGTF 115
+ + E ++ + L++ N+++L G L+ E+ P ++ D + T+
Sbjct: 57 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY 116
Query: 116 KDLLC--LHKYSRLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGT 173
L L RVIHRD+K N+LL KI++FG + V+ + + GT
Sbjct: 117 ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIANFG----WSVHAPSSRRTTLCGT 172
Query: 174 YGYMSLEYTMSGTVSIKTDVFGFGVLVLKIVCGK 207
Y+ E K D++ GVL + + GK
Sbjct: 173 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 51/94 (54%), Gaps = 2/94 (2%)
Query: 129 VIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVS 188
V++RD+K N++LD + KI+DFG+ + G+++ GA GT Y++ E
Sbjct: 126 VVYRDIKLENLMLDKDGHIKITDFGLCKE-GISD-GATMKTFCGTPEYLAPEVLEDNDYG 183
Query: 189 IKTDVFGFGVLVLKIVCGKKNNKSYHTERPLNLV 222
D +G GV++ +++CG+ + ER L+
Sbjct: 184 RAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELI 217
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 69/162 (42%), Gaps = 32/162 (19%)
Query: 66 EFQNEAKLIAKLQYTNLVKLLGCSIHGEERL-LVYEFMPNKSLDSSFSGTFKDLLCLHKY 124
+ + E ++ + L++ N+++L G H R+ L+ E+ P +++L L K+
Sbjct: 54 QLRREVEIQSHLRHPNILRLYGY-FHDSTRVYLILEYAP-------LGTVYRELQKLSKF 105
Query: 125 SRLR-------------------VIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGA 165
R VIHRD+K N+LL KI+DFG + V+ +
Sbjct: 106 DEQRTATYITELANALSYCHSKKVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSS 161
Query: 166 NTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKIVCGK 207
+ GT Y+ E K D++ GVL + + GK
Sbjct: 162 RRAALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 66/153 (43%), Gaps = 16/153 (10%)
Query: 66 EFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSL----------DSSFSGTF 115
+ + E ++ + L++ N+++L G L+ E+ P ++ D + T+
Sbjct: 58 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATY 117
Query: 116 KDLLC--LHKYSRLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGT 173
L L RVIHRD+K N+LL KI+DFG + V+ + + GT
Sbjct: 118 ITELANALSYCHSKRVIHRDIKPENLLLGSNGELKIADFG----WSVHAPSSRRTTLCGT 173
Query: 174 YGYMSLEYTMSGTVSIKTDVFGFGVLVLKIVCG 206
Y+ E K D++ GVL + + G
Sbjct: 174 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG 206
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 50/80 (62%), Gaps = 4/80 (5%)
Query: 128 RVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTV 187
+++HRD+K SNIL++ + K+ DFG++ + +S AN+ VGT YMS E
Sbjct: 152 KIMHRDVKPSNILVNSRGEIKLCDFGVSG--QLIDSMANS--FVGTRSYMSPERLQGTHY 207
Query: 188 SIKTDVFGFGVLVLKIVCGK 207
S+++D++ G+ ++++ G+
Sbjct: 208 SVQSDIWSMGLSLVEMAVGR 227
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 89/208 (42%), Gaps = 35/208 (16%)
Query: 27 HMYIQQEQTRDRVILVGKFP-------NEQEVAIKRLAWTSGQGRVEFQNEAKLIAKLQY 79
HM +E + V+ G F ++VAIK++ S R F E + ++++ +
Sbjct: 4 HMIDYKEIEVEEVVGRGAFGVVCKAKWRAKDVAIKQI--ESESERKAFIVELRQLSRVNH 61
Query: 80 TNLVKLLGCSIHGEERLLVYEFMPNKSLDSSFSGT------------------FKDLLCL 121
N+VKL G ++ LV E+ SL + G + + L
Sbjct: 62 PNIVKLYGACLN--PVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYL 119
Query: 122 HKYSRLRVIHRDLKASNILLDDQLNT-KISDFGMARIFGVNESGANTNRIVGTYGYMSLE 180
H +IHRDLK N+LL KI DFG A ++ N+ G+ +M+ E
Sbjct: 120 HSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDI---QTHMTNNK--GSAAWMAPE 174
Query: 181 YTMSGTVSIKTDVFGFGVLVLKIVCGKK 208
S K DVF +G+++ +++ +K
Sbjct: 175 VFEGSNYSEKCDVFSWGIILWEVITRRK 202
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 47/98 (47%)
Query: 106 SLDSSFSGTFKDLLCLHKYSRLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGA 165
+++ S +F+ + S + IHRDL A NILL + KI DFG+AR N
Sbjct: 197 TMEDLISYSFQVARGMEFLSSRKCIHRDLAARNILLSENNVVKICDFGLARDIYKNPDYV 256
Query: 166 NTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKI 203
+M+ E S K+DV+ +GVL+ +I
Sbjct: 257 RKGDTRLPLKWMAPESIFDKIYSTKSDVWSYGVLLWEI 294
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 89/208 (42%), Gaps = 35/208 (16%)
Query: 27 HMYIQQEQTRDRVILVGKFP-------NEQEVAIKRLAWTSGQGRVEFQNEAKLIAKLQY 79
HM +E + V+ G F ++VAIK++ S R F E + ++++ +
Sbjct: 3 HMIDYKEIEVEEVVGRGAFGVVCKAKWRAKDVAIKQI--ESESERKAFIVELRQLSRVNH 60
Query: 80 TNLVKLLGCSIHGEERLLVYEFMPNKSLDSSFSGT------------------FKDLLCL 121
N+VKL G ++ LV E+ SL + G + + L
Sbjct: 61 PNIVKLYGACLN--PVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYL 118
Query: 122 HKYSRLRVIHRDLKASNILLDDQLNT-KISDFGMARIFGVNESGANTNRIVGTYGYMSLE 180
H +IHRDLK N+LL KI DFG A ++ N+ G+ +M+ E
Sbjct: 119 HSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDI---QTHMTNNK--GSAAWMAPE 173
Query: 181 YTMSGTVSIKTDVFGFGVLVLKIVCGKK 208
S K DVF +G+++ +++ +K
Sbjct: 174 VFEGSNYSEKCDVFSWGIILWEVITRRK 201
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 51/94 (54%), Gaps = 2/94 (2%)
Query: 129 VIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVS 188
V++RD+K N++LD + KI+DFG+ + G+++ GA GT Y++ E
Sbjct: 126 VVYRDIKLENLMLDKDGHIKITDFGLCKE-GISD-GATMKTFCGTPEYLAPEVLEDNDYG 183
Query: 189 IKTDVFGFGVLVLKIVCGKKNNKSYHTERPLNLV 222
D +G GV++ +++CG+ + ER L+
Sbjct: 184 RAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELI 217
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 44/81 (54%), Gaps = 6/81 (7%)
Query: 129 VIHRDLKASNILLDDQLNTKISDFGMAR--IFGVNESGANTNRIVGTYGYMSLEYTMSGT 186
+I+RDLK N++LD + + KI+DFGM + I+ G T GT Y++ E
Sbjct: 463 IIYRDLKLDNVMLDSEGHIKIADFGMCKENIW----DGVTTKXFCGTPDYIAPEIIAYQP 518
Query: 187 VSIKTDVFGFGVLVLKIVCGK 207
D + FGVL+ +++ G+
Sbjct: 519 YGKSVDWWAFGVLLYEMLAGQ 539
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 78/184 (42%), Gaps = 26/184 (14%)
Query: 38 RVILVGKF-PNEQEVAIKRLAWTSGQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERL 96
R++ + KF ++ + +K++A E KL+ +L++ NLV LL +
Sbjct: 51 RIVAIKKFLESDDDKMVKKIA----------MREIKLLKQLRHENLVNLLEVCKKKKRWY 100
Query: 97 LVYEFMPNKSLDS-SFSGTFKDLLCLHKY-----------SRLRVIHRDLKASNILLDDQ 144
LV+EF+ + LD D + KY +IHRD+K NIL+
Sbjct: 101 LVFEFVDHTILDDLELFPNGLDYQVVQKYLFQIINGIGFCHSHNIIHRDIKPENILVSQS 160
Query: 145 LNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKT-DVFGFGVLVLKI 203
K+ DFG AR G + V T Y + E + K DV+ G LV ++
Sbjct: 161 GVVKLCDFGFARTLAA--PGEVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEM 218
Query: 204 VCGK 207
G+
Sbjct: 219 FMGE 222
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 60/116 (51%), Gaps = 17/116 (14%)
Query: 69 NEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSLDSSFSGTFKDLLCLHKYSRLR 128
NE +I +L T+L +++ + ++ + + + T + + LH +
Sbjct: 87 NEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQ-----------TLRAVKVLHGSN--- 132
Query: 129 VIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMS 184
VIHRDLK SN+L++ + K+ DFG+ARI ++ES A+ + G M+ EY +
Sbjct: 133 VIHRDLKPSNLLINSNCDLKVCDFGLARI--IDESAADNSEPTGQQSGMT-EYVAT 185
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 50/80 (62%), Gaps = 4/80 (5%)
Query: 128 RVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTV 187
+++HRD+K SNIL++ + K+ DFG++ + +S AN+ VGT YMS E
Sbjct: 125 KIMHRDVKPSNILVNSRGEIKLCDFGVSG--QLIDSMANS--FVGTRSYMSPERLQGTHY 180
Query: 188 SIKTDVFGFGVLVLKIVCGK 207
S+++D++ G+ ++++ G+
Sbjct: 181 SVQSDIWSMGLSLVEMAVGR 200
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 66/154 (42%), Gaps = 16/154 (10%)
Query: 66 EFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSL----------DSSFSGTF 115
+ + E ++ + L++ N+++L G L+ E+ P ++ D + T+
Sbjct: 55 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY 114
Query: 116 KDLLC--LHKYSRLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGT 173
L L RVIHRD+K N+LL KI+DFG + + + + GT
Sbjct: 115 ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG----WSCHAPSSRRTTLSGT 170
Query: 174 YGYMSLEYTMSGTVSIKTDVFGFGVLVLKIVCGK 207
Y+ E K D++ GVL + + GK
Sbjct: 171 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 204
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 46/82 (56%), Gaps = 3/82 (3%)
Query: 129 VIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTM---SG 185
+IHRD+K++NI L + L KI DFG+A + + G+ +M+ E +
Sbjct: 153 IIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNN 212
Query: 186 TVSIKTDVFGFGVLVLKIVCGK 207
S ++DV+ +G+++ +++ G+
Sbjct: 213 PFSFQSDVYSYGIVLYELMTGE 234
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 55/99 (55%), Gaps = 10/99 (10%)
Query: 114 TFKDLL-CLHKYSR-------LRVIHRDLKASNILLDDQLNTKISDFGMAR-IFGVNESG 164
TFKDL+ C ++ +R + IHRDL A N+L+ + KI+DFG+AR I ++
Sbjct: 144 TFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYK 203
Query: 165 ANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKI 203
TN + +M+ E + ++DV+ FGVL+ +I
Sbjct: 204 KTTNGRLPV-KWMAPEALFDRVYTHQSDVWSFGVLMWEI 241
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 78/192 (40%), Gaps = 53/192 (27%)
Query: 64 RVEFQNE-----AKLIAKLQYTNLVKLLGC-------SIHGEERLLVYEFMPNKSLDSSF 111
RV++ NE K +AKL + N+V GC ++ L ++ P S +SS
Sbjct: 44 RVKYNNEKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSDDSLESSDYDPENSKNSSR 103
Query: 112 SGT--------------------------FKDLLCLHKYSRL----------RVIHRDLK 135
S T +L L + ++ ++IHRDLK
Sbjct: 104 SKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLIHRDLK 163
Query: 136 ASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFG 195
SNI L D KI DFG+ + + G T R GT YMS E S + D++
Sbjct: 164 PSNIFLVDTKQVKIGDFGL--VTSLKNDGKRT-RSKGTLRYMSPEQISSQDYGKEVDLYA 220
Query: 196 FGVLVLKI--VC 205
G+++ ++ VC
Sbjct: 221 LGLILAELLHVC 232
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 55/99 (55%), Gaps = 10/99 (10%)
Query: 114 TFKDLL-CLHKYSR-------LRVIHRDLKASNILLDDQLNTKISDFGMAR-IFGVNESG 164
TFKDL+ C ++ +R + IHRDL A N+L+ + KI+DFG+AR I ++
Sbjct: 142 TFKDLVSCTYQLARGMEYLASQKCIHRDLTARNVLVTENNVMKIADFGLARDINNIDYYK 201
Query: 165 ANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKI 203
TN + +M+ E + ++DV+ FGVL+ +I
Sbjct: 202 KTTNGRLPV-KWMAPEALFDRVYTHQSDVWSFGVLMWEI 239
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 50/80 (62%), Gaps = 4/80 (5%)
Query: 128 RVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTV 187
+++HRD+K SNIL++ + K+ DFG++ + +S AN+ VGT YMS E
Sbjct: 125 KIMHRDVKPSNILVNSRGEIKLCDFGVSG--QLIDSMANS--FVGTRSYMSPERLQGTHY 180
Query: 188 SIKTDVFGFGVLVLKIVCGK 207
S+++D++ G+ ++++ G+
Sbjct: 181 SVQSDIWSMGLSLVEMAVGR 200
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 53/95 (55%), Gaps = 7/95 (7%)
Query: 115 FKDLLCLHKY-SRLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGT 173
F+ +L Y R V+HRDLK N+LLD +N KI+DFG++ + E ++ G+
Sbjct: 117 FQQILSAVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRDS---CGS 173
Query: 174 YGYMSLEYTMSGTVSI--KTDVFGFGVLVLKIVCG 206
Y + E +SG + + D++ GV++ ++CG
Sbjct: 174 PNYAAPE-VISGRLYAGPEVDIWSCGVILYALLCG 207
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 50/80 (62%), Gaps = 4/80 (5%)
Query: 128 RVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTV 187
+++HRD+K SNIL++ + K+ DFG++ + +S AN+ VGT YMS E
Sbjct: 125 KIMHRDVKPSNILVNSRGEIKLCDFGVSG--QLIDSMANS--FVGTRSYMSPERLQGTHY 180
Query: 188 SIKTDVFGFGVLVLKIVCGK 207
S+++D++ G+ ++++ G+
Sbjct: 181 SVQSDIWSMGLSLVEMAVGR 200
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 96/222 (43%), Gaps = 31/222 (13%)
Query: 50 EVAIKRLAWTSGQGRVE-FQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSLD 108
+VAIK L + + E EA+++ +L +V+L+G E +LV E L
Sbjct: 365 DVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGV-CQAEALMLVMEMAGGGPLH 423
Query: 109 SSFSGTFKDLLC------LHKYS-------RLRVIHRDLKASNILLDDQLNTKISDFGMA 155
G +++ LH+ S +HR+L A N+LL ++ KISDFG++
Sbjct: 424 KFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRNLAARNVLLVNRHYAKISDFGLS 483
Query: 156 RIFGVNESGANTNRIVGTYG--YMSLEYTMSGTVSIKTDVFGFGVLVLKIVC-GKKNNKS 212
+ G ++S T R G + + + E S ++DV+ +GV + + + G+K K
Sbjct: 484 KALGADDS-YYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKK 542
Query: 213 YHTERPLNLVGIAWQLWNEGKDLELIDLTLDGSCPPNEDAFL 254
+ + +GK +E CPP A +
Sbjct: 543 MKGPEVMAFI-------EQGKRME-----CPPECPPELYALM 572
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 50/80 (62%), Gaps = 4/80 (5%)
Query: 128 RVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTV 187
+++HRD+K SNIL++ + K+ DFG++ + +S AN+ VGT YMS E
Sbjct: 125 KIMHRDVKPSNILVNSRGEIKLCDFGVSG--QLIDSMANS--FVGTRSYMSPERLQGTHY 180
Query: 188 SIKTDVFGFGVLVLKIVCGK 207
S+++D++ G+ ++++ G+
Sbjct: 181 SVQSDIWSMGLSLVEMAVGR 200
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 50/80 (62%), Gaps = 4/80 (5%)
Query: 128 RVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTV 187
+++HRD+K SNIL++ + K+ DFG++ + +S AN+ VGT YMS E
Sbjct: 125 KIMHRDVKPSNILVNSRGEIKLCDFGVSG--QLIDSMANS--FVGTRSYMSPERLQGTHY 180
Query: 188 SIKTDVFGFGVLVLKIVCGK 207
S+++D++ G+ ++++ G+
Sbjct: 181 SVQSDIWSMGLSLVEMAVGR 200
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 55/99 (55%), Gaps = 10/99 (10%)
Query: 114 TFKDLL-CLHKYSR-------LRVIHRDLKASNILLDDQLNTKISDFGMAR-IFGVNESG 164
TFKDL+ C ++ +R + IHRDL A N+L+ + KI+DFG+AR I ++
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYK 214
Query: 165 ANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKI 203
TN + +M+ E + ++DV+ FGVL+ +I
Sbjct: 215 KTTNGRLPV-KWMAPEALFDRVYTHQSDVWSFGVLMWEI 252
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 51/95 (53%), Gaps = 7/95 (7%)
Query: 115 FKDLLCLHKY-SRLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGT 173
F+ +L Y R V+HRDLK N+LLD +N KI+DFG++ + G G+
Sbjct: 117 FQQILSAVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMM---SDGEFLRTSCGS 173
Query: 174 YGYMSLEYTMSGTVSI--KTDVFGFGVLVLKIVCG 206
Y + E +SG + + D++ GV++ ++CG
Sbjct: 174 PNYAAPE-VISGRLYAGPEVDIWSCGVILYALLCG 207
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 120 CLHKYSRLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSL 179
C + + + HRD K+ N+LL L ++DFG+A F + +T+ VGT YM+
Sbjct: 135 CRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQVGTRRYMAP 194
Query: 180 EYTMSGTVSIKTDVF 194
E + G ++ + D F
Sbjct: 195 E-VLEGAINFQRDAF 208
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 55/99 (55%), Gaps = 10/99 (10%)
Query: 114 TFKDLL-CLHKYSR-------LRVIHRDLKASNILLDDQLNTKISDFGMAR-IFGVNESG 164
TFKDL+ C ++ +R + IHRDL A N+L+ + KI+DFG+AR I ++
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYK 214
Query: 165 ANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKI 203
TN + +M+ E + ++DV+ FGVL+ +I
Sbjct: 215 KTTNGRLPV-KWMAPEALFDRVYTHQSDVWSFGVLMWEI 252
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 72/163 (44%), Gaps = 32/163 (19%)
Query: 66 EFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSLDSSFSGTFKDLLCLHKYS 125
+ + EA++ KLQ+ N+V+L LV++ + L F+D++ YS
Sbjct: 50 KLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGEL-------FEDIVAREFYS 102
Query: 126 RLR-------------------VIHRDLKASNILLDDQLN---TKISDFGMARIFGVNES 163
++HR+LK N+LL + K++DFG+A VN+S
Sbjct: 103 EADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDS 160
Query: 164 GANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKIVCG 206
A + GT GY+S E S D++ GV++ ++ G
Sbjct: 161 EA-WHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 202
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 55/99 (55%), Gaps = 10/99 (10%)
Query: 114 TFKDLL-CLHKYSR-------LRVIHRDLKASNILLDDQLNTKISDFGMAR-IFGVNESG 164
TFKDL+ C ++ +R + IHRDL A N+L+ + KI+DFG+AR I ++
Sbjct: 201 TFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYK 260
Query: 165 ANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKI 203
TN + +M+ E + ++DV+ FGVL+ +I
Sbjct: 261 KTTNGRLPV-KWMAPEALFDRVYTHQSDVWSFGVLMWEI 298
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 57/110 (51%), Gaps = 16/110 (14%)
Query: 69 NEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSLDSSFSGTFKDLLCLHKYSRLR 128
NE +I +L T+L +++ + ++ + + + T + + LH +
Sbjct: 87 NEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQ-----------TLRAVKVLHGSN--- 132
Query: 129 VIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMS 178
VIHRDLK SN+L++ + K+ DFG+ARI ++ES A+ + G M+
Sbjct: 133 VIHRDLKPSNLLINSNCDLKVCDFGLARI--IDESAADNSEPTGQQSGMT 180
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 55/99 (55%), Gaps = 10/99 (10%)
Query: 114 TFKDLL-CLHKYSR-------LRVIHRDLKASNILLDDQLNTKISDFGMAR-IFGVNESG 164
TFKDL+ C ++ +R + IHRDL A N+L+ + KI+DFG+AR I ++
Sbjct: 147 TFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYK 206
Query: 165 ANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKI 203
TN + +M+ E + ++DV+ FGVL+ +I
Sbjct: 207 KTTNGRLPV-KWMAPEALFDRVYTHQSDVWSFGVLMWEI 244
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 54/97 (55%), Gaps = 13/97 (13%)
Query: 117 DLLC-LHKYSRLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYG 175
+++C LHK L ++HRDLK NILLDD +N K++DFG + + G + GT
Sbjct: 122 EVICALHK---LNIVHRDLKPENILLDDDMNIKLTDFGFSCQL---DPGEKLREVCGTPS 175
Query: 176 YMS---LEYTMSGT---VSIKTDVFGFGVLVLKIVCG 206
Y++ +E +M+ + D++ GV++ ++ G
Sbjct: 176 YLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 212
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 40/76 (52%)
Query: 128 RVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTV 187
+ IHRDL A NILL ++ KI DFG+AR + +M+ E
Sbjct: 218 KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVY 277
Query: 188 SIKTDVFGFGVLVLKI 203
+I++DV+ FGVL+ +I
Sbjct: 278 TIQSDVWSFGVLLWEI 293
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 55/99 (55%), Gaps = 10/99 (10%)
Query: 114 TFKDLL-CLHKYSR-------LRVIHRDLKASNILLDDQLNTKISDFGMAR-IFGVNESG 164
TFKDL+ C ++ +R + IHRDL A N+L+ + KI+DFG+AR I ++
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYK 214
Query: 165 ANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKI 203
TN + +M+ E + ++DV+ FGVL+ +I
Sbjct: 215 KTTNGRLPV-KWMAPEALFDRVYTHQSDVWSFGVLMWEI 252
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 55/99 (55%), Gaps = 10/99 (10%)
Query: 114 TFKDLL-CLHKYSR-------LRVIHRDLKASNILLDDQLNTKISDFGMAR-IFGVNESG 164
TFKDL+ C ++ +R + IHRDL A N+L+ + KI+DFG+AR I ++
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYK 214
Query: 165 ANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKI 203
TN + +M+ E + ++DV+ FGVL+ +I
Sbjct: 215 KTTNGRLPV-KWMAPEALFDRVYTHQSDVWSFGVLMWEI 252
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 66/150 (44%), Gaps = 17/150 (11%)
Query: 69 NEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSLDSSFS--GTFKD--------- 117
NE +++ + + LVKL +V E++ + S G F +
Sbjct: 77 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQ 136
Query: 118 -LLCLHKYSRLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGY 176
+L L +I+RDLK N+L+D+Q +++DFG A+ T + GT Y
Sbjct: 137 IVLTFEYLHSLDLIYRDLKPENLLIDEQGYIQVTDFGFAK-----RVKGRTWXLCGTPEY 191
Query: 177 MSLEYTMSGTVSIKTDVFGFGVLVLKIVCG 206
++ E +S + D + GVL+ ++ G
Sbjct: 192 LAPEIILSKGYNKAVDWWALGVLIYEMAAG 221
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 65/150 (43%), Gaps = 17/150 (11%)
Query: 69 NEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSLDSSFS--GTFKD--------- 117
NE +++ + + LVKL +V E++ + S G F +
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQ 149
Query: 118 -LLCLHKYSRLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGY 176
+L L +I+RDLK N+L+D Q +++DFG A+ T + GT Y
Sbjct: 150 IVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLAGTPEY 204
Query: 177 MSLEYTMSGTVSIKTDVFGFGVLVLKIVCG 206
++ E +S + D + GVL+ ++ G
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 90/192 (46%), Gaps = 36/192 (18%)
Query: 51 VAIKRLAWTSGQGRVE-------FQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMP 103
VAIK L +G E FQ E +++ L + N+VKL G +H R +V EF+P
Sbjct: 47 VAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGL-MHNPPR-MVMEFVP 104
Query: 104 -----NKSLDSSFSGTFK-------DLLCLHKYSRLR---VIHRDLKASNILL-----DD 143
++ LD + + D+ +Y + + ++HRDL++ NI L +
Sbjct: 105 CGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENA 164
Query: 144 QLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSI--KTDVFGFGVLVL 201
+ K++DFG ++ +S + + ++G + +M+ E + S K D + F +++
Sbjct: 165 PVCAKVADFGTSQ-----QSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILY 219
Query: 202 KIVCGKKNNKSY 213
I+ G+ Y
Sbjct: 220 TILTGEGPFDEY 231
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 40/76 (52%)
Query: 128 RVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTV 187
+ IHRDL A NILL ++ KI DFG+AR + +M+ E
Sbjct: 213 KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVY 272
Query: 188 SIKTDVFGFGVLVLKI 203
+I++DV+ FGVL+ +I
Sbjct: 273 TIQSDVWSFGVLLWEI 288
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 72/163 (44%), Gaps = 32/163 (19%)
Query: 66 EFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSLDSSFSGTFKDLLCLHKYS 125
+ + EA++ KLQ+ N+V+L LV++ + L F+D++ YS
Sbjct: 51 KLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGEL-------FEDIVAREFYS 103
Query: 126 RLR-------------------VIHRDLKASNILLDDQLN---TKISDFGMARIFGVNES 163
++HR+LK N+LL + K++DFG+A VN+S
Sbjct: 104 EADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDS 161
Query: 164 GANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKIVCG 206
A + GT GY+S E S D++ GV++ ++ G
Sbjct: 162 EA-WHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 203
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 44/81 (54%), Gaps = 6/81 (7%)
Query: 129 VIHRDLKASNILLDDQLNTKISDFGMAR--IFGVNESGANTNRIVGTYGYMSLEYTMSGT 186
+I+RDLK N++LD + + KI+DFGM + I+ G T GT Y++ E
Sbjct: 142 IIYRDLKLDNVMLDSEGHIKIADFGMCKENIW----DGVTTKXFCGTPDYIAPEIIAYQP 197
Query: 187 VSIKTDVFGFGVLVLKIVCGK 207
D + FGVL+ +++ G+
Sbjct: 198 YGKSVDWWAFGVLLYEMLAGQ 218
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 54/97 (55%), Gaps = 13/97 (13%)
Query: 117 DLLC-LHKYSRLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYG 175
+++C LHK L ++HRDLK NILLDD +N K++DFG + + G + GT
Sbjct: 135 EVICALHK---LNIVHRDLKPENILLDDDMNIKLTDFGFSCQL---DPGEKLREVCGTPS 188
Query: 176 YMS---LEYTMSGT---VSIKTDVFGFGVLVLKIVCG 206
Y++ +E +M+ + D++ GV++ ++ G
Sbjct: 189 YLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 225
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 81/185 (43%), Gaps = 25/185 (13%)
Query: 38 RVILVGKFPNEQEVAIKRLAWT--SGQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEER 95
R IL GK EVA+K + T + + E ++ L + N+VKL I E+
Sbjct: 34 RHILTGK-----EVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPNIVKLFEV-IETEKT 87
Query: 96 L-LVYEFMPNKSL-----------DSSFSGTFKDLLCLHKYSRLR-VIHRDLKASNILLD 142
L LV E+ + + F+ ++ +Y + ++HRDLKA N+LLD
Sbjct: 88 LYLVXEYASGGEVFDYLVAHGRXKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLD 147
Query: 143 DQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLE-YTMSGTVSIKTDVFGFGVLVL 201
N KI+DFG + F G + G Y + E + + DV+ GV++
Sbjct: 148 ADXNIKIADFGFSNEFTF---GNKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILY 204
Query: 202 KIVCG 206
+V G
Sbjct: 205 TLVSG 209
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 81/180 (45%), Gaps = 27/180 (15%)
Query: 47 NEQEVAIKRLAWTSGQGR--VEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPN 104
+QE A+K + S + + E +L+ KL + N++KL +V E
Sbjct: 46 TQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTG 105
Query: 105 KSL-------------DSS--FSGTFKDLLCLHKYSRLRVIHRDLKASNILLDDQ---LN 146
L D++ F + +HK++ ++HRDLK NILL+ + +
Sbjct: 106 GELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHN---IVHRDLKPENILLESKEKDCD 162
Query: 147 TKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKIVCG 206
KI DFG++ F N + +GT Y++ E + GT K DV+ GV++ ++ G
Sbjct: 163 IKIIDFGLSTCFQQNTKMKDR---IGTAYYIAPE-VLRGTYDEKCDVWSAGVILYILLSG 218
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 81/180 (45%), Gaps = 27/180 (15%)
Query: 47 NEQEVAIKRLAWTSGQGR--VEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPN 104
+QE A+K + S + + E +L+ KL + N++KL +V E
Sbjct: 46 TQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTG 105
Query: 105 KSL-------------DSS--FSGTFKDLLCLHKYSRLRVIHRDLKASNILLDDQ---LN 146
L D++ F + +HK++ ++HRDLK NILL+ + +
Sbjct: 106 GELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHN---IVHRDLKPENILLESKEKDCD 162
Query: 147 TKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKIVCG 206
KI DFG++ F N + +GT Y++ E + GT K DV+ GV++ ++ G
Sbjct: 163 IKIIDFGLSTCFQQNTKMKDR---IGTAYYIAPE-VLRGTYDEKCDVWSAGVILYILLSG 218
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 55/99 (55%), Gaps = 10/99 (10%)
Query: 114 TFKDLL-CLHKYSR-------LRVIHRDLKASNILLDDQLNTKISDFGMAR-IFGVNESG 164
TFKDL+ C ++ +R + IHRDL A N+L+ + KI+DFG+AR I ++
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYK 214
Query: 165 ANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKI 203
TN + +M+ E + ++DV+ FGVL+ +I
Sbjct: 215 KTTNGRLPV-KWMAPEALFDRVYTHQSDVWSFGVLMWEI 252
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 40/76 (52%)
Query: 128 RVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTV 187
+ IHRDL A NILL ++ KI DFG+AR + +M+ E
Sbjct: 220 KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVY 279
Query: 188 SIKTDVFGFGVLVLKI 203
+I++DV+ FGVL+ +I
Sbjct: 280 TIQSDVWSFGVLLWEI 295
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 76/187 (40%), Gaps = 40/187 (21%)
Query: 48 EQEVAIKRLAWTSGQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSL 107
E+ VAIK+L+ FQN+ AK Y LV L+ C H L+ F P KSL
Sbjct: 49 ERNVAIKKLSRP-------FQNQTH--AKRAYRELV-LMKCVNHKNIIGLLNVFTPQKSL 98
Query: 108 DS--------------------------SFSGTFKDLLCLHKY-SRLRVIHRDLKASNIL 140
+ S +LC K+ +IHRDLK SNI+
Sbjct: 99 EEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIV 158
Query: 141 LDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLV 200
+ KI DFG+AR G S +V Y Y + E + D++ G ++
Sbjct: 159 VKSDCTLKILDFGLARTAGT--SFMMEPEVVTRY-YRAPEVILGMGYKENVDLWSVGCIM 215
Query: 201 LKIVCGK 207
++VC K
Sbjct: 216 GEMVCHK 222
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 72/163 (44%), Gaps = 32/163 (19%)
Query: 66 EFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSLDSSFSGTFKDLLCLHKYS 125
+ + EA++ KLQ+ N+V+L LV++ + L F+D++ YS
Sbjct: 51 KLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGEL-------FEDIVAREFYS 103
Query: 126 RLR-------------------VIHRDLKASNILLDDQLN---TKISDFGMARIFGVNES 163
++HR+LK N+LL + K++DFG+A VN+S
Sbjct: 104 EADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDS 161
Query: 164 GANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKIVCG 206
A + GT GY+S E S D++ GV++ ++ G
Sbjct: 162 EA-WHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 203
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 40/76 (52%)
Query: 128 RVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTV 187
+ IHRDL A NILL ++ KI DFG+AR + +M+ E
Sbjct: 211 KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVY 270
Query: 188 SIKTDVFGFGVLVLKI 203
+I++DV+ FGVL+ +I
Sbjct: 271 TIQSDVWSFGVLLWEI 286
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 55/104 (52%), Gaps = 16/104 (15%)
Query: 69 NEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSLDSSFSGTFKDLLCLHKYSRLR 128
NE +I +L T+L +++ + ++ + + + T + + LH +
Sbjct: 87 NEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQ-----------TLRAVKVLHGSN--- 132
Query: 129 VIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVG 172
VIHRDLK SN+L++ + K+ DFG+ARI ++ES A+ + G
Sbjct: 133 VIHRDLKPSNLLINSNCDLKVCDFGLARI--IDESAADNSEPTG 174
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 50/80 (62%), Gaps = 4/80 (5%)
Query: 128 RVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTV 187
+++HRD+K SNIL++ + K+ DFG++ + +S AN+ VGT YMS E
Sbjct: 144 KIMHRDVKPSNILVNSRGEIKLCDFGVSG--QLIDSMANS--FVGTRSYMSPERLQGTHY 199
Query: 188 SIKTDVFGFGVLVLKIVCGK 207
S+++D++ G+ ++++ G+
Sbjct: 200 SVQSDIWSMGLSLVEMAVGR 219
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 54/97 (55%), Gaps = 13/97 (13%)
Query: 117 DLLC-LHKYSRLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYG 175
+++C LHK L ++HRDLK NILLDD +N K++DFG + + G + GT
Sbjct: 135 EVICALHK---LNIVHRDLKPENILLDDDMNIKLTDFGFSCQL---DPGEKLRSVCGTPS 188
Query: 176 YMS---LEYTMSGT---VSIKTDVFGFGVLVLKIVCG 206
Y++ +E +M+ + D++ GV++ ++ G
Sbjct: 189 YLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 225
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 44/90 (48%), Gaps = 7/90 (7%)
Query: 122 HKYSRLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEY 181
H L++IHRD+K SNILLD N K+ DFG++ G R G YM+ E
Sbjct: 140 HLKENLKIIHRDIKPSNILLDRSGNIKLCDFGIS---GQLVDSIAKTRDAGCRPYMAPER 196
Query: 182 TMSGT----VSIKTDVFGFGVLVLKIVCGK 207
+++DV+ G+ + ++ G+
Sbjct: 197 IDPSASRQGYDVRSDVWSLGITLYELATGR 226
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 49/98 (50%), Gaps = 8/98 (8%)
Query: 114 TFKDLLCLH-------KYSRLR-VIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGA 165
TF+DLLC ++ + +HRDL A N+L+ KI DFG+AR + +
Sbjct: 170 TFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYV 229
Query: 166 NTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKI 203
+M+ E G +IK+DV+ +G+L+ +I
Sbjct: 230 VRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEI 267
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 65/150 (43%), Gaps = 17/150 (11%)
Query: 69 NEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSLDSSFS--GTFKD--------- 117
NE +++ + + LVKL +V E++ + S G F +
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQ 149
Query: 118 -LLCLHKYSRLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGY 176
+L L +I+RDLK N+L+D Q +++DFG A+ T + GT Y
Sbjct: 150 IVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLXGTPEY 204
Query: 177 MSLEYTMSGTVSIKTDVFGFGVLVLKIVCG 206
++ E +S + D + GVL+ ++ G
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 72/163 (44%), Gaps = 32/163 (19%)
Query: 66 EFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSLDSSFSGTFKDLLCLHKYS 125
+ + EA++ KLQ+ N+V+L LV++ + L F+D++ YS
Sbjct: 74 KLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGEL-------FEDIVAREFYS 126
Query: 126 RLR-------------------VIHRDLKASNILLDDQLN---TKISDFGMARIFGVNES 163
++HR+LK N+LL + K++DFG+A VN+S
Sbjct: 127 EADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDS 184
Query: 164 GANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKIVCG 206
A + GT GY+S E S D++ GV++ ++ G
Sbjct: 185 EA-WHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 226
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 65/150 (43%), Gaps = 17/150 (11%)
Query: 69 NEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSLDSSFS--GTFKD--------- 117
NE +++ + + LVKL +V E++ + S G F +
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQ 149
Query: 118 -LLCLHKYSRLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGY 176
+L L +I+RDLK N+L+D Q +++DFG A+ T + GT Y
Sbjct: 150 IVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEY 204
Query: 177 MSLEYTMSGTVSIKTDVFGFGVLVLKIVCG 206
++ E +S + D + GVL+ ++ G
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 79/189 (41%), Gaps = 23/189 (12%)
Query: 39 VILVGK-FPNEQEVAIKRLAWTSGQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLL 97
++ G+ N+ +AIK + + E L L++ N+V+ LG +
Sbjct: 37 IVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKI 96
Query: 98 VYEFMPNKSLDS---SFSGTFKD------------LLCLHKYSRLRVIHRDLKASNILLD 142
E +P SL + S G KD L L +++HRD+K N+L++
Sbjct: 97 FMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLIN 156
Query: 143 DQLNT-KISDFGMA-RIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSI--KTDVFGFGV 198
KISDFG + R+ G+N T GT YM+ E G D++ G
Sbjct: 157 TYSGVLKISDFGTSKRLAGINPC---TETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGC 213
Query: 199 LVLKIVCGK 207
++++ GK
Sbjct: 214 TIIEMATGK 222
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 65/150 (43%), Gaps = 17/150 (11%)
Query: 69 NEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSLDSSFS--GTFKD--------- 117
NE +++ + + LVKL +V E++ + S G F +
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQ 149
Query: 118 -LLCLHKYSRLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGY 176
+L L +I+RDLK N+L+D Q +++DFG A+ T + GT Y
Sbjct: 150 IVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEY 204
Query: 177 MSLEYTMSGTVSIKTDVFGFGVLVLKIVCG 206
++ E +S + D + GVL+ ++ G
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYQMAAG 234
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 80/179 (44%), Gaps = 32/179 (17%)
Query: 51 VAIKRLAWTSGQGRVEFQN--EAKLIAKLQ---YTNLVKLLG-CSIHGEER----LLVYE 100
VA+KR+ +G+ + E ++ L+ + N+V+L C++ +R LV+E
Sbjct: 40 VALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFE 99
Query: 101 FM----------------PNKSLDSSFSGTFKDLLCLHKYSRLRVIHRDLKASNILLDDQ 144
+ P +++ + L LH + RV+HRDLK NIL+
Sbjct: 100 HVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSS 156
Query: 145 LNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKI 203
K++DFG+ARI+ + +V T Y + E + + + D++ G + ++
Sbjct: 157 GQIKLADFGLARIYSFQMA---LTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEM 212
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 65/150 (43%), Gaps = 17/150 (11%)
Query: 69 NEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSLDSSFS--GTFKD--------- 117
NE +++ + + LVKL +V E++ + S G F +
Sbjct: 85 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQ 144
Query: 118 -LLCLHKYSRLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGY 176
+L L +I+RDLK N+L+D Q +++DFG A+ T + GT Y
Sbjct: 145 IVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEY 199
Query: 177 MSLEYTMSGTVSIKTDVFGFGVLVLKIVCG 206
++ E +S + D + GVL+ ++ G
Sbjct: 200 LAPEIILSKGYNKAVDWWALGVLIYEMAAG 229
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 65/150 (43%), Gaps = 17/150 (11%)
Query: 69 NEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSLDSSFS--GTFKD--------- 117
NE +++ + + LVKL +V E++ + S G F +
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQ 149
Query: 118 -LLCLHKYSRLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGY 176
+L L +I+RDLK N+L+D Q +++DFG A+ T + GT Y
Sbjct: 150 IVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEY 204
Query: 177 MSLEYTMSGTVSIKTDVFGFGVLVLKIVCG 206
++ E +S + D + GVL+ ++ G
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 70/161 (43%), Gaps = 35/161 (21%)
Query: 64 RVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSLDSSFSGTFKDLLCLHK 123
+ +F EA+++ + + N+V+L+G + +V E + G F L
Sbjct: 156 KAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQG--------GDFLTFLRTEG 207
Query: 124 YSRLRV----------------------IHRDLKASNILLDDQLNTKISDFGMAR--IFG 159
+RLRV IHRDL A N L+ ++ KISDFGM+R G
Sbjct: 208 -ARLRVKTLLQMVGDAAAGMEYLESKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADG 266
Query: 160 VNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLV 200
V + ++ + + E G S ++DV+ FG+L+
Sbjct: 267 VXAASGGLRQV--PVKWTAPEALNYGRYSSESDVWSFGILL 305
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 65/150 (43%), Gaps = 17/150 (11%)
Query: 69 NEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSLDSSFS--GTFKD--------- 117
NE +++ + + LVKL +V E++ + S G F +
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQ 149
Query: 118 -LLCLHKYSRLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGY 176
+L L +I+RDLK N+L+D Q +++DFG A+ T + GT Y
Sbjct: 150 IVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEY 204
Query: 177 MSLEYTMSGTVSIKTDVFGFGVLVLKIVCG 206
++ E +S + D + GVL+ ++ G
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 65/150 (43%), Gaps = 17/150 (11%)
Query: 69 NEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSLDSSFS--GTFKD--------- 117
NE +++ + + LVKL +V E++ + S G F +
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQ 149
Query: 118 -LLCLHKYSRLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGY 176
+L L +I+RDLK N+L+D Q +++DFG A+ T + GT Y
Sbjct: 150 IVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEY 204
Query: 177 MSLEYTMSGTVSIKTDVFGFGVLVLKIVCG 206
++ E +S + D + GVL+ ++ G
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 65/150 (43%), Gaps = 17/150 (11%)
Query: 69 NEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSLDSSFS--GTFKD--------- 117
NE +++ + + LVKL +V E++ + S G F +
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQ 149
Query: 118 -LLCLHKYSRLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGY 176
+L L +I+RDLK N+L+D Q +++DFG A+ T + GT Y
Sbjct: 150 IVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEY 204
Query: 177 MSLEYTMSGTVSIKTDVFGFGVLVLKIVCG 206
++ E +S + D + GVL+ ++ G
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 65/150 (43%), Gaps = 17/150 (11%)
Query: 69 NEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSLDSSFS--GTFKD--------- 117
NE +++ + + LVKL +V E++ + S G F +
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQ 149
Query: 118 -LLCLHKYSRLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGY 176
+L L +I+RDLK N+L+D Q +++DFG A+ T + GT Y
Sbjct: 150 IVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEY 204
Query: 177 MSLEYTMSGTVSIKTDVFGFGVLVLKIVCG 206
++ E +S + D + GVL+ ++ G
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 55/99 (55%), Gaps = 10/99 (10%)
Query: 114 TFKDLL-CLHKYSR-------LRVIHRDLKASNILLDDQLNTKISDFGMAR-IFGVNESG 164
TFKDL+ C ++ +R + IHRDL A N+L+ + +I+DFG+AR I ++
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMRIADFGLARDINNIDYYK 214
Query: 165 ANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKI 203
TN + +M+ E + ++DV+ FGVL+ +I
Sbjct: 215 KTTNGRLPV-KWMAPEALFDRVYTHQSDVWSFGVLMWEI 252
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 65/150 (43%), Gaps = 17/150 (11%)
Query: 69 NEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSLDSSFS--GTFKD--------- 117
NE +++ + + LVKL +V E++ + S G F +
Sbjct: 91 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQ 150
Query: 118 -LLCLHKYSRLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGY 176
+L L +I+RDLK N+L+D Q +++DFG A+ T + GT Y
Sbjct: 151 IVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEY 205
Query: 177 MSLEYTMSGTVSIKTDVFGFGVLVLKIVCG 206
++ E +S + D + GVL+ ++ G
Sbjct: 206 LAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 65/150 (43%), Gaps = 17/150 (11%)
Query: 69 NEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSLDSSFS--GTFKD--------- 117
NE +++ + + LVKL +V E++ + S G F +
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQ 149
Query: 118 -LLCLHKYSRLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGY 176
+L L +I+RDLK N+L+D Q +++DFG A+ T + GT Y
Sbjct: 150 IVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEY 204
Query: 177 MSLEYTMSGTVSIKTDVFGFGVLVLKIVCG 206
++ E +S + D + GVL+ ++ G
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 61/116 (52%), Gaps = 12/116 (10%)
Query: 97 LVYEFMPNKSLDSSFSGTFKDLL-CLHKYSR-------LRVIHRDLKASNILLDDQLNTK 148
L + F P+ + + S KDL+ C ++ +R + IHRDL A N+L+ + K
Sbjct: 133 LEFSFNPSHNPEEQLSS--KDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMK 190
Query: 149 ISDFGMAR-IFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKI 203
I+DFG+AR I ++ TN + +M+ E + ++DV+ FGVL+ +I
Sbjct: 191 IADFGLARDIHHIDXXKKTTNGRL-PVKWMAPEALFDRIYTHQSDVWSFGVLLWEI 245
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 65/150 (43%), Gaps = 17/150 (11%)
Query: 69 NEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSLDSSFS--GTFKD--------- 117
NE +++ + + LVKL +V E++ + S G F +
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEPHARFYAAQ 149
Query: 118 -LLCLHKYSRLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGY 176
+L L +I+RDLK N+L+D Q +++DFG A+ T + GT Y
Sbjct: 150 IVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEY 204
Query: 177 MSLEYTMSGTVSIKTDVFGFGVLVLKIVCG 206
++ E +S + D + GVL+ ++ G
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 65/150 (43%), Gaps = 17/150 (11%)
Query: 69 NEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSLDSSFS--GTFKD--------- 117
NE +++ + + LVKL +V E++ + S G F +
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQ 149
Query: 118 -LLCLHKYSRLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGY 176
+L L +I+RDLK N+L+D Q +++DFG A+ T + GT Y
Sbjct: 150 IVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEY 204
Query: 177 MSLEYTMSGTVSIKTDVFGFGVLVLKIVCG 206
++ E +S + D + GVL+ ++ G
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 65/150 (43%), Gaps = 17/150 (11%)
Query: 69 NEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSLDSSFS--GTFKD--------- 117
NE +++ + + LVKL +V E++ + S G F +
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQ 149
Query: 118 -LLCLHKYSRLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGY 176
+L L +I+RDLK N+L+D Q +++DFG A+ T + GT Y
Sbjct: 150 IVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEY 204
Query: 177 MSLEYTMSGTVSIKTDVFGFGVLVLKIVCG 206
++ E +S + D + GVL+ ++ G
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 50/80 (62%), Gaps = 4/80 (5%)
Query: 128 RVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTV 187
+++HRD+K SNIL++ + K+ DFG++ + +S AN+ VGT YM+ E
Sbjct: 135 QIMHRDVKPSNILVNSRGEIKLCDFGVSG--QLIDSMANS--FVGTRSYMAPERLQGTHY 190
Query: 188 SIKTDVFGFGVLVLKIVCGK 207
S+++D++ G+ ++++ G+
Sbjct: 191 SVQSDIWSMGLSLVELAVGR 210
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 79/189 (41%), Gaps = 23/189 (12%)
Query: 39 VILVGK-FPNEQEVAIKRLAWTSGQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLL 97
++ G+ N+ +AIK + + E L L++ N+V+ LG +
Sbjct: 23 IVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKI 82
Query: 98 VYEFMPNKSLDS---SFSGTFKD------------LLCLHKYSRLRVIHRDLKASNILLD 142
E +P SL + S G KD L L +++HRD+K N+L++
Sbjct: 83 FMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLIN 142
Query: 143 DQLNT-KISDFGMA-RIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSI--KTDVFGFGV 198
KISDFG + R+ G+N T GT YM+ E G D++ G
Sbjct: 143 TYSGVLKISDFGTSKRLAGINPC---TETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGC 199
Query: 199 LVLKIVCGK 207
++++ GK
Sbjct: 200 TIIEMATGK 208
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 80/172 (46%), Gaps = 18/172 (10%)
Query: 50 EVAIKRLAWTSGQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMP-----N 104
++A K + + + E +NE ++ +L + NL++L + +LV E++ +
Sbjct: 116 KLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGELFD 175
Query: 105 KSLDSSFSGTFKDLLCLHK--------YSRLRVIHRDLKASNILL--DDQLNTKISDFGM 154
+ +D S++ T D + K ++ ++H DLK NIL D KI DFG+
Sbjct: 176 RIIDESYNLTELDTILFMKQICEGIRHMHQMYILHLDLKPENILCVNRDAKQIKIIDFGL 235
Query: 155 ARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKIVCG 206
AR + E N GT +++ E VS TD++ GV+ ++ G
Sbjct: 236 ARRYKPREK-LKVN--FGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSG 284
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 76/186 (40%), Gaps = 40/186 (21%)
Query: 48 EQEVAIKRLAWTSGQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSL 107
E+ VAIK+L+ FQN+ AK Y LV L+ C H L+ F P KSL
Sbjct: 49 ERNVAIKKLSRP-------FQNQTH--AKRAYRELV-LMKCVNHKNIIGLLNVFTPQKSL 98
Query: 108 DS--------------------------SFSGTFKDLLCLHKY-SRLRVIHRDLKASNIL 140
+ S +LC K+ +IHRDLK SNI+
Sbjct: 99 EEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIV 158
Query: 141 LDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLV 200
+ KI DFG+AR G S T +V Y Y + E + D++ G ++
Sbjct: 159 VKSDCTLKILDFGLARTAGT--SFMMTPEVVTRY-YRAPEVILGMGYKENVDIWSVGCIM 215
Query: 201 LKIVCG 206
+++ G
Sbjct: 216 GEMIKG 221
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 81/179 (45%), Gaps = 27/179 (15%)
Query: 48 EQEVAIKRLAWTSGQGR--VEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNK 105
+QE A+K + S + + E +L+ KL + N++KL +V E
Sbjct: 47 QQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGG 106
Query: 106 SL-------------DSS--FSGTFKDLLCLHKYSRLRVIHRDLKASNILLDDQ---LNT 147
L D++ F + +HK++ ++HRDLK NILL+ + +
Sbjct: 107 ELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHN---IVHRDLKPENILLESKEKDCDI 163
Query: 148 KISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKIVCG 206
KI DFG++ F N + +GT Y++ E + GT K DV+ GV++ ++ G
Sbjct: 164 KIIDFGLSTCFQQNTKMKDR---IGTAYYIAPE-VLRGTYDEKCDVWSAGVILYILLSG 218
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 78/175 (44%), Gaps = 32/175 (18%)
Query: 51 VAIKRLAWTSGQGRVEFQN--EAKLIAKLQ---YTNLVKLLG-CSIHGEER----LLVYE 100
VA+KR+ +G+ + E ++ L+ + N+V+L C++ +R LV+E
Sbjct: 40 VALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFE 99
Query: 101 FM----------------PNKSLDSSFSGTFKDLLCLHKYSRLRVIHRDLKASNILLDDQ 144
+ P +++ + L LH + RV+HRDLK NIL+
Sbjct: 100 HVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSS 156
Query: 145 LNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVL 199
K++DFG+ARI+ + +V T Y + E + + + D++ G +
Sbjct: 157 GQIKLADFGLARIYSFQMA---LTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCI 208
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 61/116 (52%), Gaps = 12/116 (10%)
Query: 97 LVYEFMPNKSLDSSFSGTFKDLL-CLHKYSR-------LRVIHRDLKASNILLDDQLNTK 148
L Y + P+ + + S KDL+ C ++ +R + IHRDL A N+L+ + K
Sbjct: 122 LEYSYNPSHNPEEQLSS--KDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMK 179
Query: 149 ISDFGMAR-IFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKI 203
I+DFG+AR I ++ TN + +M+ E + ++DV+ FGVL+ +I
Sbjct: 180 IADFGLARDIHHIDYYKKTTNGRLPV-KWMAPEALFDRIYTHQSDVWSFGVLLWEI 234
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 75/153 (49%), Gaps = 19/153 (12%)
Query: 70 EAKLIAKLQYTNLVKLLGCSIHGEERL-LVYEFMPNKSLDSSFSG-------------TF 115
E L+ L++ N+V L IH E+ L LV+E++ +K L F
Sbjct: 50 EVSLLKDLKHANIVTLHDI-IHTEKSLTLVFEYL-DKDLKQYLDDCGNIINMHNVKLFLF 107
Query: 116 KDLLCLHKYSRLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYG 175
+ L L R +V+HRDLK N+L++++ K++DFG+AR + + N +V T
Sbjct: 108 QLLRGLAYCHRQKVLHRDLKPQNLLINERGELKLADFGLARAKSI-PTKTYDNEVV-TLW 165
Query: 176 YMSLEYTMSGT-VSIKTDVFGFGVLVLKIVCGK 207
Y + + T S + D++G G + ++ G+
Sbjct: 166 YRPPDILLGSTDYSTQIDMWGVGCIFYEMATGR 198
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 78/175 (44%), Gaps = 32/175 (18%)
Query: 51 VAIKRLAWTSGQGRVEFQN--EAKLIAKLQ---YTNLVKLLG-CSIHGEER----LLVYE 100
VA+KR+ +G+ + E ++ L+ + N+V+L C++ +R LV+E
Sbjct: 40 VALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFE 99
Query: 101 FM----------------PNKSLDSSFSGTFKDLLCLHKYSRLRVIHRDLKASNILLDDQ 144
+ P +++ + L LH + RV+HRDLK NIL+
Sbjct: 100 HVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSS 156
Query: 145 LNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVL 199
K++DFG+ARI+ + +V T Y + E + + + D++ G +
Sbjct: 157 GQIKLADFGLARIYSFQMA---LTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCI 208
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 72/156 (46%), Gaps = 27/156 (17%)
Query: 66 EFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSL---DSSFSGTFKDLLC-- 120
+F+NE ++I ++ + G + +E ++YE+M N S+ D F K+ C
Sbjct: 89 DFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFI 148
Query: 121 ------------LHKYSRLR----VIHRDLKASNILLDDQLNTKISDFGMARIFGVNESG 164
L+ +S + + HRD+K SNIL+D K+SDFG + + V++
Sbjct: 149 PIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILMDKNGRVKLSDFGESE-YMVDKKI 207
Query: 165 ANTNRIVGTYGYMSLEY--TMSGTVSIKTDVFGFGV 198
+ GTY +M E+ S K D++ G+
Sbjct: 208 KGSR---GTYEFMPPEFFSNESSYNGAKVDIWSLGI 240
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 70/161 (43%), Gaps = 35/161 (21%)
Query: 64 RVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSLDSSFSGTFKDLLCLHK 123
+ +F EA+++ + + N+V+L+G + +V E + G F L
Sbjct: 156 KAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQG--------GDFLTFLRTEG 207
Query: 124 YSRLRV----------------------IHRDLKASNILLDDQLNTKISDFGMAR--IFG 159
+RLRV IHRDL A N L+ ++ KISDFGM+R G
Sbjct: 208 -ARLRVKTLLQMVGDAAAGMEYLESKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADG 266
Query: 160 VNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLV 200
V + ++ + + E G S ++DV+ FG+L+
Sbjct: 267 VYAASGGLRQV--PVKWTAPEALNYGRYSSESDVWSFGILL 305
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 42/78 (53%), Gaps = 5/78 (6%)
Query: 129 VIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVS 188
+I+RDLK NILLD + KI+DFG A+ T + GT Y++ E + +
Sbjct: 127 IIYRDLKPENILLDKNGHIKITDFGFAKYV-----PDVTYXLCGTPDYIAPEVVSTKPYN 181
Query: 189 IKTDVFGFGVLVLKIVCG 206
D + FG+L+ +++ G
Sbjct: 182 KSIDWWSFGILIYEMLAG 199
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 65/150 (43%), Gaps = 17/150 (11%)
Query: 69 NEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSLDSSFS--GTFKD--------- 117
NE +++ + + LVKL +V E++ + S G F +
Sbjct: 111 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQ 170
Query: 118 -LLCLHKYSRLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGY 176
+L L +I+RDLK N+L+D Q +++DFG A+ T + GT Y
Sbjct: 171 IVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEY 225
Query: 177 MSLEYTMSGTVSIKTDVFGFGVLVLKIVCG 206
++ E +S + D + GVL+ ++ G
Sbjct: 226 LAPEIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 67/151 (44%), Gaps = 19/151 (12%)
Query: 69 NEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSLDSSFS--GTFKD--------- 117
NE +++ + + LVKL +V E++ + S G F +
Sbjct: 111 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQ 170
Query: 118 -LLCLHKYSRLRVIHRDLKASNILLDDQLNTKISDFGMA-RIFGVNESGANTNRIVGTYG 175
+L L +I+RDLK N+L+D Q +++DFG A R+ G T + GT
Sbjct: 171 IVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGA------TWTLCGTPE 224
Query: 176 YMSLEYTMSGTVSIKTDVFGFGVLVLKIVCG 206
Y++ E +S + D + GVL+ ++ G
Sbjct: 225 YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 61/116 (52%), Gaps = 12/116 (10%)
Query: 97 LVYEFMPNKSLDSSFSGTFKDLL-CLHKYSR-------LRVIHRDLKASNILLDDQLNTK 148
L Y + P+ + + S KDL+ C ++ +R + IHRDL A N+L+ + K
Sbjct: 126 LEYSYNPSHNPEEQLSS--KDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMK 183
Query: 149 ISDFGMAR-IFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKI 203
I+DFG+AR I ++ TN + +M+ E + ++DV+ FGVL+ +I
Sbjct: 184 IADFGLARDIHHIDYYKKTTNGRLPV-KWMAPEALFDRIYTHQSDVWSFGVLLWEI 238
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 79/186 (42%), Gaps = 40/186 (21%)
Query: 48 EQEVAIKRLAWTSGQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSL 107
E+ VAIK+L+ FQN+ AK Y LV L+ C H L+ F P KSL
Sbjct: 49 ERNVAIKKLSRP-------FQNQTH--AKRAYRELV-LMKCVNHKNIIGLLNVFTPQKSL 98
Query: 108 -------------DSSFSGTFK-------------DLLCLHKY-SRLRVIHRDLKASNIL 140
D++ S + +LC K+ +IHRDLK SNI+
Sbjct: 99 EEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIV 158
Query: 141 LDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLV 200
+ KI DFG+AR G S T +V Y Y + E + D++ G ++
Sbjct: 159 VKSDATLKILDFGLARTAGT--SFMMTPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIM 215
Query: 201 LKIVCG 206
+++ G
Sbjct: 216 GEMIKG 221
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 61/116 (52%), Gaps = 12/116 (10%)
Query: 97 LVYEFMPNKSLDSSFSGTFKDLL-CLHKYSR-------LRVIHRDLKASNILLDDQLNTK 148
L Y + P+ + + S KDL+ C ++ +R + IHRDL A N+L+ + K
Sbjct: 133 LEYSYNPSHNPEEQLSS--KDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMK 190
Query: 149 ISDFGMAR-IFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKI 203
I+DFG+AR I ++ TN + +M+ E + ++DV+ FGVL+ +I
Sbjct: 191 IADFGLARDIHHIDYYKKTTNGRLPV-KWMAPEALFDRIYTHQSDVWSFGVLLWEI 245
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 61/116 (52%), Gaps = 12/116 (10%)
Query: 97 LVYEFMPNKSLDSSFSGTFKDLL-CLHKYSR-------LRVIHRDLKASNILLDDQLNTK 148
L Y + P+ + + S KDL+ C ++ +R + IHRDL A N+L+ + K
Sbjct: 125 LEYSYNPSHNPEEQLSS--KDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMK 182
Query: 149 ISDFGMAR-IFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKI 203
I+DFG+AR I ++ TN + +M+ E + ++DV+ FGVL+ +I
Sbjct: 183 IADFGLARDIHHIDYYKKTTNGRLPV-KWMAPEALFDRIYTHQSDVWSFGVLLWEI 237
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 61/116 (52%), Gaps = 12/116 (10%)
Query: 97 LVYEFMPNKSLDSSFSGTFKDLL-CLHKYSR-------LRVIHRDLKASNILLDDQLNTK 148
L Y + P+ + + S KDL+ C ++ +R + IHRDL A N+L+ + K
Sbjct: 133 LEYSYNPSHNPEEQLSS--KDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMK 190
Query: 149 ISDFGMAR-IFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKI 203
I+DFG+AR I ++ TN + +M+ E + ++DV+ FGVL+ +I
Sbjct: 191 IADFGLARDIHHIDYYKKTTNGRLPV-KWMAPEALFDRIYTHQSDVWSFGVLLWEI 245
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 79/186 (42%), Gaps = 40/186 (21%)
Query: 48 EQEVAIKRLAWTSGQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSL 107
E+ VAIK+L+ FQN+ AK Y LV L+ C H L+ F P KSL
Sbjct: 49 ERNVAIKKLSRP-------FQNQTH--AKRAYRELV-LMKCVNHKNIIGLLNVFTPQKSL 98
Query: 108 -------------DSSFSGTFK-------------DLLCLHKY-SRLRVIHRDLKASNIL 140
D++ S + +LC K+ +IHRDLK SNI+
Sbjct: 99 EEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIV 158
Query: 141 LDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLV 200
+ KI DFG+AR G S T +V Y Y + E + D++ G ++
Sbjct: 159 VKSDCTLKILDFGLARTAGT--SFMMTPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIM 215
Query: 201 LKIVCG 206
+++ G
Sbjct: 216 GEMIKG 221
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 90/192 (46%), Gaps = 36/192 (18%)
Query: 51 VAIKRLAWTSGQGRVE-------FQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMP 103
VAIK L +G E FQ E +++ L + N+VKL G +H R +V EF+P
Sbjct: 47 VAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGL-MHNPPR-MVMEFVP 104
Query: 104 -----NKSLDSSFSGTFK-------DLLCLHKYSRLR---VIHRDLKASNILL-----DD 143
++ LD + + D+ +Y + + ++HRDL++ NI L +
Sbjct: 105 CGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENA 164
Query: 144 QLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSI--KTDVFGFGVLVL 201
+ K++DF +++ +S + + ++G + +M+ E + S K D + F +++
Sbjct: 165 PVCAKVADFSLSQ-----QSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILY 219
Query: 202 KIVCGKKNNKSY 213
I+ G+ Y
Sbjct: 220 TILTGEGPFDEY 231
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 76/178 (42%), Gaps = 32/178 (17%)
Query: 51 VAIKRLAWTSGQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSLDS- 109
A K + S + ++ E ++A + N+VKLL + ++ EF ++D+
Sbjct: 65 AAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAV 124
Query: 110 ------SFSGTFKDLLCLHKYSRL------RVIHRDLKASNILLDDQLNTKISDFGMARI 157
+ + ++C L ++IHRDLKA NIL + K++DFG+
Sbjct: 125 MLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGV--- 181
Query: 158 FGVNESGANTNRI------VGTYGYMSLEYTMSGT-----VSIKTDVFGFGVLVLKIV 204
S NT I +GT +M+ E M T K DV+ G+ ++++
Sbjct: 182 -----SAKNTRXIQRRDXFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMA 234
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 44/90 (48%), Gaps = 7/90 (7%)
Query: 120 CLHKYSRLRVIHRDLKASNILLDD---QLNTKISDFGMARIFGVNESGANTNRIVGTYGY 176
L + V+H+DLK NIL D KI DFG+A +F +E N GT Y
Sbjct: 136 ALAYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHSTNA---AGTALY 192
Query: 177 MSLEYTMSGTVSIKTDVFGFGVLVLKIVCG 206
M+ E V+ K D++ GV++ ++ G
Sbjct: 193 MAPE-VFKRDVTFKCDIWSAGVVMYFLLTG 221
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 76/178 (42%), Gaps = 32/178 (17%)
Query: 51 VAIKRLAWTSGQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSLDS- 109
A K + S + ++ E ++A + N+VKLL + ++ EF ++D+
Sbjct: 65 AAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAV 124
Query: 110 ------SFSGTFKDLLCLHKYSRL------RVIHRDLKASNILLDDQLNTKISDFGMARI 157
+ + ++C L ++IHRDLKA NIL + K++DFG+
Sbjct: 125 MLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGV--- 181
Query: 158 FGVNESGANTNRI------VGTYGYMSLEYTMSGT-----VSIKTDVFGFGVLVLKIV 204
S NT I +GT +M+ E M T K DV+ G+ ++++
Sbjct: 182 -----SAKNTRXIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMA 234
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 76/177 (42%), Gaps = 25/177 (14%)
Query: 51 VAIKRLAWTSGQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSL--- 107
V + + + G + + EA + L++ ++V+LL +V+EFM L
Sbjct: 57 VDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFE 116
Query: 108 -----DSSFSGTFKDLLCLHKYSRL----------RVIHRDLKASNILLDDQLNT---KI 149
D+ F + + + H ++ +IHRD+K +LL + N+ K+
Sbjct: 117 IVKRADAGF--VYSEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKL 174
Query: 150 SDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKIVCG 206
FG+A G ESG VGT +M+ E DV+G GV++ ++ G
Sbjct: 175 GGFGVAIQLG--ESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSG 229
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 65/150 (43%), Gaps = 17/150 (11%)
Query: 69 NEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSLDSSFS--GTFKD--------- 117
NE +++ + + LVKL +V E++ + S G F +
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQ 149
Query: 118 -LLCLHKYSRLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGY 176
+L L +I+RDLK N+++D Q +++DFG A+ T + GT Y
Sbjct: 150 IVLTFEYLHSLDLIYRDLKPENLIIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEY 204
Query: 177 MSLEYTMSGTVSIKTDVFGFGVLVLKIVCG 206
++ E +S + D + GVL+ ++ G
Sbjct: 205 LAPEIIISKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 76/178 (42%), Gaps = 32/178 (17%)
Query: 51 VAIKRLAWTSGQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSLDS- 109
A K + S + ++ E ++A + N+VKLL + ++ EF ++D+
Sbjct: 65 AAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAV 124
Query: 110 ------SFSGTFKDLLCLHKYSRL------RVIHRDLKASNILLDDQLNTKISDFGMARI 157
+ + ++C L ++IHRDLKA NIL + K++DFG+
Sbjct: 125 MLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGV--- 181
Query: 158 FGVNESGANTNRI------VGTYGYMSLEYTMSGT-----VSIKTDVFGFGVLVLKIV 204
S NT I +GT +M+ E M T K DV+ G+ ++++
Sbjct: 182 -----SAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMA 234
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 76/186 (40%), Gaps = 40/186 (21%)
Query: 48 EQEVAIKRLAWTSGQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSL 107
E+ VAIK+L+ FQN+ AK Y LV L+ C H L+ F P KSL
Sbjct: 50 ERNVAIKKLSRP-------FQNQTH--AKRAYRELV-LMKCVNHKNIIGLLNVFTPQKSL 99
Query: 108 DS--------------------------SFSGTFKDLLCLHKY-SRLRVIHRDLKASNIL 140
+ S +LC K+ +IHRDLK SNI+
Sbjct: 100 EEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIV 159
Query: 141 LDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLV 200
+ KI DFG+AR G S T +V Y Y + E + D++ G ++
Sbjct: 160 VKSDCTLKILDFGLARTAGT--SFMMTPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIM 216
Query: 201 LKIVCG 206
+++ G
Sbjct: 217 GEMIKG 222
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 76/186 (40%), Gaps = 40/186 (21%)
Query: 48 EQEVAIKRLAWTSGQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSL 107
E+ VAIK+L+ FQN+ AK Y LV L+ C H L+ F P KSL
Sbjct: 49 ERNVAIKKLSRP-------FQNQTH--AKRAYRELV-LMKCVNHKNIIGLLNVFTPQKSL 98
Query: 108 DS--------------------------SFSGTFKDLLCLHKY-SRLRVIHRDLKASNIL 140
+ S +LC K+ +IHRDLK SNI+
Sbjct: 99 EEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIV 158
Query: 141 LDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLV 200
+ KI DFG+AR G S T +V Y Y + E + D++ G ++
Sbjct: 159 VKSDCTLKILDFGLARTAGT--SFMMTPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIM 215
Query: 201 LKIVCG 206
+++ G
Sbjct: 216 GEMIKG 221
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 46/90 (51%), Gaps = 9/90 (10%)
Query: 128 RVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMS--- 184
R+IHRD+K NILLD+ + I+DF +A + E+ T + GT YM+ E S
Sbjct: 135 RIIHRDMKPDNILLDEHGHVHITDFNIAAMLP-RETQITT--MAGTKPYMAPEMFSSRKG 191
Query: 185 GTVSIKTDVFGFGVLVLKIVCGKKNNKSYH 214
S D + GV +++ G+ + YH
Sbjct: 192 AGYSFAVDWWSLGVTAYELLRGR---RPYH 218
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 74/157 (47%), Gaps = 20/157 (12%)
Query: 67 FQNEAKLIAKLQYTNLVKLLGCSIHGEERL-LVYEFMPNKSLDSSFSG-----------T 114
F E ++A +V+L C+ ++ L +V E+MP L + S T
Sbjct: 122 FWEERDIMAFANSPWVVQLF-CAFQDDKYLYMVMEYMPGGDLVNLMSNYDVPEKWAKFYT 180
Query: 115 FKDLLCLHKYSRLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESG-ANTNRIVGT 173
+ +L L + +IHRD+K N+LLD + K++DFG ++E+G + + VGT
Sbjct: 181 AEVVLALDAIHSMGLIHRDVKPDNMLLDKHGHLKLADFGTC--MKMDETGMVHCDTAVGT 238
Query: 174 YGYMSLEYTMS----GTVSIKTDVFGFGVLVLKIVCG 206
Y+S E S G + D + GV + +++ G
Sbjct: 239 PDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVG 275
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 61/116 (52%), Gaps = 12/116 (10%)
Query: 97 LVYEFMPNKSLDSSFSGTFKDLL-CLHKYSR-------LRVIHRDLKASNILLDDQLNTK 148
L Y + P+ + + S KDL+ C ++ +R + IHRDL A N+L+ + K
Sbjct: 174 LEYSYNPSHNPEEQLSS--KDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMK 231
Query: 149 ISDFGMAR-IFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKI 203
I+DFG+AR I ++ TN + +M+ E + ++DV+ FGVL+ +I
Sbjct: 232 IADFGLARDIHHIDYYKKTTNGRLPV-KWMAPEALFDRIYTHQSDVWSFGVLLWEI 286
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 73/160 (45%), Gaps = 19/160 (11%)
Query: 63 GRVEFQ---NEAKLIAKLQYTNLVKLLG-CSIHGEERLLVYEFMPNKSL---DSSFSGTF 115
GR FQ + I L + ++V+LLG C G LV +++P SL G
Sbjct: 73 GRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP--GSSLQLVTQYLPLGSLLDHVRQHRGAL 130
Query: 116 KDLLCLHKYSRLR----------VIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGA 165
L L+ ++ ++HR+L A N+LL +++DFG+A + ++
Sbjct: 131 GPQLLLNWGVQIAKGMYYLEEHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQL 190
Query: 166 NTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKIVC 205
+ +M+LE G + ++DV+ +GV V +++
Sbjct: 191 LYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMT 230
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 76/186 (40%), Gaps = 40/186 (21%)
Query: 48 EQEVAIKRLAWTSGQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSL 107
E+ VAIK+L+ FQN+ AK Y LV L+ C H L+ F P KSL
Sbjct: 49 ERNVAIKKLSRP-------FQNQTH--AKRAYRELV-LMKCVNHKNIIGLLNVFTPQKSL 98
Query: 108 DS--------------------------SFSGTFKDLLCLHKY-SRLRVIHRDLKASNIL 140
+ S +LC K+ +IHRDLK SNI+
Sbjct: 99 EEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIV 158
Query: 141 LDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLV 200
+ KI DFG+AR G S T +V Y Y + E + D++ G ++
Sbjct: 159 VKSDCTLKILDFGLARTAGT--SFMMTPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIM 215
Query: 201 LKIVCG 206
+++ G
Sbjct: 216 GEMIKG 221
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 54/113 (47%), Gaps = 10/113 (8%)
Query: 115 FKDLLCLHKYSRLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTY 174
+ L LH++ +VIHRD+K N+LL + K+ DFG++ ++ + N +GT
Sbjct: 139 LRGLSHLHQH---KVIHRDIKGQNVLLTENAEVKLVDFGVS--AQLDRTVGRRNTFIGTP 193
Query: 175 GYMSLEYTM-----SGTVSIKTDVFGFGVLVLKIVCGKKNNKSYHTERPLNLV 222
+M+ E T K+D++ G+ +++ G H R L L+
Sbjct: 194 YWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLI 246
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 49/107 (45%), Gaps = 12/107 (11%)
Query: 103 PNKSLDSSFSGTFKDLLCLHKYSRLRVIHRDLKASNILLD---DQLNTKISDFGMARIFG 159
P ++L S S + LH+ R+IHRDLK NI+L +L KI D G A+
Sbjct: 123 PIRTLLSDISSALR---YLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKEL- 175
Query: 160 VNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKIVCG 206
+ G VGT Y++ E ++ D + FG L + + G
Sbjct: 176 --DQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITG 220
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 76/177 (42%), Gaps = 25/177 (14%)
Query: 51 VAIKRLAWTSGQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSL--- 107
V + + + G + + EA + L++ ++V+LL +V+EFM L
Sbjct: 59 VDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFE 118
Query: 108 -----DSSFSGTFKDLLCLHKYSRL----------RVIHRDLKASNILLDDQLNT---KI 149
D+ F + + + H ++ +IHRD+K +LL + N+ K+
Sbjct: 119 IVKRADAGF--VYSEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKL 176
Query: 150 SDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKIVCG 206
FG+A G ESG VGT +M+ E DV+G GV++ ++ G
Sbjct: 177 GGFGVAIQLG--ESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSG 231
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 49/107 (45%), Gaps = 12/107 (11%)
Query: 103 PNKSLDSSFSGTFKDLLCLHKYSRLRVIHRDLKASNILLD---DQLNTKISDFGMARIFG 159
P ++L S S + LH+ R+IHRDLK NI+L +L KI D G A+
Sbjct: 122 PIRTLLSDISSALR---YLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKEL- 174
Query: 160 VNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKIVCG 206
+ G VGT Y++ E ++ D + FG L + + G
Sbjct: 175 --DQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITG 219
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 64/142 (45%), Gaps = 13/142 (9%)
Query: 67 FQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSLDSSFSGTFKDLLCLHKYSR 126
FQ E KL L Y N +L + ER +E + G +L L +
Sbjct: 128 FQTETKLHLILDYINGGELF-THLSQRERFTEHEV-------QIYVGEI--VLALEHLHK 177
Query: 127 LRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGT 186
L +I+RD+K NILLD + ++DFG+++ F +E+ GT YM+ + G
Sbjct: 178 LGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADET-ERAYDFCGTIEYMAPDIVRGGD 236
Query: 187 VS--IKTDVFGFGVLVLKIVCG 206
D + GVL+ +++ G
Sbjct: 237 SGHDKAVDWWSLGVLMYELLTG 258
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 61/116 (52%), Gaps = 12/116 (10%)
Query: 97 LVYEFMPNKSLDSSFSGTFKDLL-CLHKYSR-------LRVIHRDLKASNILLDDQLNTK 148
L Y + P+ + + S KDL+ C ++ +R + IHRDL A N+L+ + K
Sbjct: 118 LEYCYNPSHNPEEQLSS--KDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMK 175
Query: 149 ISDFGMAR-IFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKI 203
I+DFG+AR I ++ TN + +M+ E + ++DV+ FGVL+ +I
Sbjct: 176 IADFGLARDIHHIDYYKKTTNGRLPV-KWMAPEALFDRIYTHQSDVWSFGVLLWEI 230
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/200 (21%), Positives = 97/200 (48%), Gaps = 22/200 (11%)
Query: 23 SLDWHMYIQQ--EQTRDRVILVGKFPNEQEVAIKRL--AWTSGQGRVEFQNEAKLIAKLQ 78
S++ ++ +Q+ E + + ILV + ++ IK + + S + R E + E ++A ++
Sbjct: 22 SMEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMK 81
Query: 79 YTNLVKLLGCSIHGEERLLVYEFMPN----KSLDSSFSGTFKD--------LLCL---HK 123
+ N+V+ +V ++ K +++ F++ +CL H
Sbjct: 82 HPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHV 141
Query: 124 YSRLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTM 183
+ R +++HRD+K+ NI L ++ DFG+AR+ +N + +GT Y+S E
Sbjct: 142 HDR-KILHRDIKSQNIFLTKDGTVQLGDFGIARV--LNSTVELARACIGTPYYLSPEICE 198
Query: 184 SGTVSIKTDVFGFGVLVLKI 203
+ + K+D++ G ++ ++
Sbjct: 199 NKPYNNKSDIWALGCVLYEL 218
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 52/102 (50%), Gaps = 11/102 (10%)
Query: 129 VIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVS 188
++HRDLK NIL+ K++DFG+ARI+ + A +V T Y + E + T +
Sbjct: 133 IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALAP---VVVTLWYRAPEVLLQSTYA 189
Query: 189 IKTDVFGFGVLVLK------IVCGKKNNKSYHTERPLNLVGI 224
D++ G + + + CG N+++ + +L+G+
Sbjct: 190 TPVDMWSVGCIFAEMFRRKPLFCG--NSEADQLGKIFDLIGL 229
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 73/160 (45%), Gaps = 19/160 (11%)
Query: 63 GRVEFQ---NEAKLIAKLQYTNLVKLLG-CSIHGEERLLVYEFMPNKSL---DSSFSGTF 115
GR FQ + I L + ++V+LLG C G LV +++P SL G
Sbjct: 55 GRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP--GSSLQLVTQYLPLGSLLDHVRQHRGAL 112
Query: 116 KDLLCLHKYSRLR----------VIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGA 165
L L+ ++ ++HR+L A N+LL +++DFG+A + ++
Sbjct: 113 GPQLLLNWGVQIAKGMYYLEEHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQL 172
Query: 166 NTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKIVC 205
+ +M+LE G + ++DV+ +GV V +++
Sbjct: 173 LYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMT 212
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 76/179 (42%), Gaps = 33/179 (18%)
Query: 51 VAIKRLAWTSGQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSLDS- 109
A K + S + ++ E ++A + N+VKLL + ++ EF ++D+
Sbjct: 38 AAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAV 97
Query: 110 ------SFSGTFKDLLCLHKYSRL------RVIHRDLKASNILLDDQLNTKISDFGMARI 157
+ + ++C L ++IHRDLKA NIL + K++DFG+
Sbjct: 98 MLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGV--- 154
Query: 158 FGVNESGANT-------NRIVGTYGYMSLEYTMSGT-----VSIKTDVFGFGVLVLKIV 204
S NT + +GT +M+ E M T K DV+ G+ ++++
Sbjct: 155 -----SAKNTRTXIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMA 208
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 85/196 (43%), Gaps = 47/196 (23%)
Query: 50 EVAIKRLAWTSGQGRVE-FQNEAKLIAKL-QYTNLVKLLGCSIHGEERLLVYEF------ 101
+VA+K L T+ E +E K+++ L Q+ N+V LLG HG L++ E+
Sbjct: 63 KVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDL 122
Query: 102 ----------------MPNK---SLDSSFSGTFKDLLCLHKYSRL----------RVIHR 132
P + LD + LH S++ IHR
Sbjct: 123 LNFLRRKAEAMLGPSLAPGQDPEGLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNCIHR 182
Query: 133 DLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYG-----YMSLEYTMSGTV 187
D+ A N+LL + KI DFG+AR +N+S N IV +M+ E
Sbjct: 183 DVAARNVLLTNGHVAKIGDFGLARDI-MNDS----NYIVKGNARLPVKWMAPESIFDCVY 237
Query: 188 SIKTDVFGFGVLVLKI 203
++++DV+ +G+L+ +I
Sbjct: 238 TVQSDVWSYGILLWEI 253
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 51/99 (51%), Gaps = 20/99 (20%)
Query: 129 VIHRDLKASNILLDDQLNTKISDFGMARIF------------GVNESGANTN-------R 169
++HRD+K SNILL+ + + K++DFG++R F +NE+ N +
Sbjct: 130 LLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTD 189
Query: 170 IVGTYGYMSLEYTMSGTVSIK-TDVFGFGVLVLKIVCGK 207
V T Y + E + T K D++ G ++ +I+CGK
Sbjct: 190 YVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGK 228
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 46/89 (51%), Gaps = 13/89 (14%)
Query: 129 VIHRDLKASNILLDDQLNTKISDFGMAR-------IFGVNE-----SGANTNRIVGTYGY 176
+IHRDLK NI +D+ N KI DFG+A+ I ++ S N +GT Y
Sbjct: 137 IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMY 196
Query: 177 MSLEY-TMSGTVSIKTDVFGFGVLVLKIV 204
++ E +G + K D++ G++ +++
Sbjct: 197 VATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 52/102 (50%), Gaps = 11/102 (10%)
Query: 129 VIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVS 188
++HRDLK NIL+ K++DFG+ARI+ + + +V T Y + E + T +
Sbjct: 133 IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMA---LDPVVVTLWYRAPEVLLQSTYA 189
Query: 189 IKTDVFGFGVLVLK------IVCGKKNNKSYHTERPLNLVGI 224
D++ G + + + CG N+++ + +L+G+
Sbjct: 190 TPVDMWSVGCIFAEMFRRKPLFCG--NSEADQLGKIFDLIGL 229
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 56/98 (57%), Gaps = 8/98 (8%)
Query: 115 FKDLLCLHKYSRL-RVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGT 173
F+DL+ +Y ++IHRD+K SN+L+ + + KI+DFG++ F S A + VGT
Sbjct: 143 FQDLIKGIEYLHYQKIIHRDIKPSNLLVGEDGHIKIADFGVSNEF--KGSDALLSNTVGT 200
Query: 174 YGYMSLEYTMSGTVSIKT----DVFGFGVLVLKIVCGK 207
+M+ E ++S T I + DV+ GV + V G+
Sbjct: 201 PAFMAPE-SLSETRKIFSGKALDVWAMGVTLYCFVFGQ 237
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 61/116 (52%), Gaps = 12/116 (10%)
Query: 97 LVYEFMPNKSLDSSFSGTFKDLL-CLHKYSR-------LRVIHRDLKASNILLDDQLNTK 148
L Y + P+ + + S KDL+ C ++ +R + IHRDL A N+L+ + K
Sbjct: 133 LEYCYNPSHNPEEQLSS--KDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMK 190
Query: 149 ISDFGMAR-IFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKI 203
I+DFG+AR I ++ TN + +M+ E + ++DV+ FGVL+ +I
Sbjct: 191 IADFGLARDIHHIDYYKKTTNGRLPV-KWMAPEALFDRIYTHQSDVWSFGVLLWEI 245
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 78/186 (41%), Gaps = 40/186 (21%)
Query: 48 EQEVAIKRLAWTSGQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSL 107
E+ VAIK+L+ FQN+ AK Y LV L+ H L+ F P KSL
Sbjct: 49 ERNVAIKKLSRP-------FQNQTH--AKRAYRELV-LMKVVNHKNIIGLLNVFTPQKSL 98
Query: 108 -------------DSSFSGTFKDLLCLHKYSRL--------------RVIHRDLKASNIL 140
D++ S + L + S L +IHRDLK SNI+
Sbjct: 99 EEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIV 158
Query: 141 LDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLV 200
+ KI DFG+AR G S T +V Y Y + E + D++ GV++
Sbjct: 159 VKSDATLKILDFGLARTAGT--SFMMTPYVVTRY-YRAPEVILGMGYKENVDIWSVGVIM 215
Query: 201 LKIVCG 206
+++ G
Sbjct: 216 GEMIKG 221
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 46/89 (51%), Gaps = 13/89 (14%)
Query: 129 VIHRDLKASNILLDDQLNTKISDFGMAR-------IFGVNE-----SGANTNRIVGTYGY 176
+IHRDLK NI +D+ N KI DFG+A+ I ++ S N +GT Y
Sbjct: 137 IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMY 196
Query: 177 MSLEY-TMSGTVSIKTDVFGFGVLVLKIV 204
++ E +G + K D++ G++ +++
Sbjct: 197 VATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 78/186 (41%), Gaps = 40/186 (21%)
Query: 48 EQEVAIKRLAWTSGQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSL 107
E+ VAIK+L+ FQN+ AK Y LV L+ H L+ F P KSL
Sbjct: 49 ERNVAIKKLSRP-------FQNQTH--AKRAYRELV-LMKVVNHKNIIGLLNVFTPQKSL 98
Query: 108 -------------DSSFSGTFKDLLCLHKYSRL--------------RVIHRDLKASNIL 140
D++ S + L + S L +IHRDLK SNI+
Sbjct: 99 EEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIV 158
Query: 141 LDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLV 200
+ KI DFG+AR G S T +V Y Y + E + D++ GV++
Sbjct: 159 VKSDATLKILDFGLARTAGT--SFMMTPYVVTRY-YRAPEVILGMGYKENVDIWSVGVIM 215
Query: 201 LKIVCG 206
+++ G
Sbjct: 216 GEMIKG 221
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 65/128 (50%), Gaps = 22/128 (17%)
Query: 51 VAIKRLAWTSGQGRVEFQ--NEAKLIAKLQYTNLVKLLGCSIHGEERL-LVYEFMP---- 103
VA+KR+ V E L+ +L++ N+V+L +H +++L LV+EF
Sbjct: 30 VALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDV-LHSDKKLTLVFEFCDQDLK 88
Query: 104 ------NKSLDSSFSGTFKDLLCLHK-----YSRLRVIHRDLKASNILLDDQLNTKISDF 152
N LD +F L L K +SR V+HRDLK N+L++ K++DF
Sbjct: 89 KYFDSCNGDLDPEIVKSF--LFQLLKGLGFCHSR-NVLHRDLKPQNLLINRNGELKLADF 145
Query: 153 GMARIFGV 160
G+AR FG+
Sbjct: 146 GLARAFGI 153
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 64/150 (42%), Gaps = 17/150 (11%)
Query: 69 NEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSLDSSFS--GTFKD--------- 117
NE +++ + + LVKL +V E++ + S G F +
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQ 149
Query: 118 -LLCLHKYSRLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGY 176
+L L +I+RDLK N+L+D Q +++DFG A+ T + GT Y
Sbjct: 150 IVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEY 204
Query: 177 MSLEYTMSGTVSIKTDVFGFGVLVLKIVCG 206
++ +S + D + GVL+ ++ G
Sbjct: 205 LAPAIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 44/94 (46%), Gaps = 5/94 (5%)
Query: 113 GTFKD-LLCLHKYSRLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIV 171
G +D LL L ++H D+K +NI L + K+ DFG+ G +G
Sbjct: 161 GYLRDTLLALAHLHSQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAGEVQE--- 217
Query: 172 GTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKIVC 205
G YM+ E + G+ DVF G+ +L++ C
Sbjct: 218 GDPRYMAPEL-LQGSYGTAADVFSLGLTILEVAC 250
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/188 (21%), Positives = 79/188 (42%), Gaps = 21/188 (11%)
Query: 22 SSLDWHMYIQQEQTRDRVILVGKFPNEQEVAIKRLAWTSGQGRVEFQNEAKLIAKLQYTN 81
S + Y Q+ +++L +F +E + I + +E + ++ L T+
Sbjct: 61 SPFEHQTYCQRTLREIKILL--RFRHENIIGINDIIRAPT---IEQMKDVYIVQDLMETD 115
Query: 82 LVKLLGCSIHGEERLLVYEFMPNKSLDSSFSGTFKDLLCLHKYSRLRVIHRDLKASNILL 141
L KLL C + + + + + L S V+HRDLK SN+LL
Sbjct: 116 LYKLLKCQHLSNDHICYFLYQILRGLKYIHSAN--------------VLHRDLKPSNLLL 161
Query: 142 DDQLNTKISDFGMARIFGVNESGAN-TNRIVGTYGYMSLEYTMSGTVSIKT-DVFGFGVL 199
+ + KI DFG+AR+ + V T Y + E ++ K+ D++ G +
Sbjct: 162 NTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCI 221
Query: 200 VLKIVCGK 207
+ +++ +
Sbjct: 222 LAEMLSNR 229
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/163 (21%), Positives = 69/163 (42%), Gaps = 24/163 (14%)
Query: 66 EFQNEAKLIAKLQYTNLVKLLGCSIHGEER------LLVYEFMPNKSLDSSFSGT----- 114
EF EA + + + ++ KL+G S+ + +++ FM + L + +
Sbjct: 71 EFLREAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGEN 130
Query: 115 ------------FKDLLCLHKY-SRLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVN 161
D+ C +Y S IHRDL A N +L + + ++DFG++R
Sbjct: 131 PFNLPLQTLVRFMVDIACGMEYLSSRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSG 190
Query: 162 ESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKIV 204
+ +++LE ++ +DV+ FGV + +I+
Sbjct: 191 DYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIM 233
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 70/155 (45%), Gaps = 19/155 (12%)
Query: 67 FQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSL-----------DSSFSGTF 115
F+ E +++ L + N+++L + LV E L +S +
Sbjct: 53 FKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIM 112
Query: 116 KDLLCLHKY-SRLRVIHRDLKASNIL-LDDQLNT--KISDFGMARIFGVNESGANTNRIV 171
KD+L Y +L V HRDLK N L L D ++ K+ DFG+A F + G V
Sbjct: 113 KDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARF---KPGKMMRTKV 169
Query: 172 GTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKIVCG 206
GT Y+S + + G + D + GV++ ++CG
Sbjct: 170 GTPYYVSPQ-VLEGLYGPECDEWSAGVMMYVLLCG 203
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 71/152 (46%), Gaps = 22/152 (14%)
Query: 66 EFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMP----NKSLDSSFSGTFKDLLCL 121
E EA ++ +L +V+++G E +LV E NK L + K+++ L
Sbjct: 58 ELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIEL 116
Query: 122 -HKYS-------RLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGT 173
H+ S +HRDL A N+LL Q KISDFG+++ +E+ T
Sbjct: 117 VHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQ----T 172
Query: 174 YGYMSLEYTMSGTV-----SIKTDVFGFGVLV 200
+G +++ + S K+DV+ FGVL+
Sbjct: 173 HGKWPVKWYAPECINYYKFSSKSDVWSFGVLM 204
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 70/155 (45%), Gaps = 19/155 (12%)
Query: 67 FQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSL-----------DSSFSGTF 115
F+ E +++ L + N+++L + LV E L +S +
Sbjct: 70 FKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIM 129
Query: 116 KDLLCLHKY-SRLRVIHRDLKASNIL-LDDQLNT--KISDFGMARIFGVNESGANTNRIV 171
KD+L Y +L V HRDLK N L L D ++ K+ DFG+A F + G V
Sbjct: 130 KDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARF---KPGKMMRTKV 186
Query: 172 GTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKIVCG 206
GT Y+S + + G + D + GV++ ++CG
Sbjct: 187 GTPYYVSPQ-VLEGLYGPECDEWSAGVMMYVLLCG 220
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 51/102 (50%), Gaps = 11/102 (10%)
Query: 129 VIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVS 188
++HRDLK NIL+ K++DFG+ARI+ + +V T Y + E + T +
Sbjct: 141 IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMA---LTPVVVTLWYRAPEVLLQSTYA 197
Query: 189 IKTDVFGFGVLVLK------IVCGKKNNKSYHTERPLNLVGI 224
D++ G + + + CG N+++ + +L+G+
Sbjct: 198 TPVDMWSVGCIFAEMFRRKPLFCG--NSEADQLGKIFDLIGL 237
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 71/152 (46%), Gaps = 22/152 (14%)
Query: 66 EFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMP----NKSLDSSFSGTFKDLLCL 121
E EA ++ +L +V+++G E +LV E NK L + K+++ L
Sbjct: 72 ELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIEL 130
Query: 122 -HKYS-------RLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGT 173
H+ S +HRDL A N+LL Q KISDFG+++ +E+ T
Sbjct: 131 VHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ----T 186
Query: 174 YGYMSLEYTMSGTV-----SIKTDVFGFGVLV 200
+G +++ + S K+DV+ FGVL+
Sbjct: 187 HGKWPVKWYAPECINYYKFSSKSDVWSFGVLM 218
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 47/93 (50%), Gaps = 8/93 (8%)
Query: 129 VIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEY-----TM 183
VIHRD+K SNILLD++ K+ DFG++ G +R G YM+ E
Sbjct: 146 VIHRDVKPSNILLDERGQIKLCDFGIS---GRLVDDKAKDRSAGCAAYMAPERIDPPDPT 202
Query: 184 SGTVSIKTDVFGFGVLVLKIVCGKKNNKSYHTE 216
I+ DV+ G+ ++++ G+ K+ T+
Sbjct: 203 KPDYDIRADVWSLGISLVELATGQFPYKNCKTD 235
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 71/152 (46%), Gaps = 22/152 (14%)
Query: 66 EFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMP----NKSLDSSFSGTFKDLLCL 121
E EA ++ +L +V+++G E +LV E NK L + K+++ L
Sbjct: 74 ELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIEL 132
Query: 122 -HKYS-------RLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGT 173
H+ S +HRDL A N+LL Q KISDFG+++ +E+ T
Sbjct: 133 VHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ----T 188
Query: 174 YGYMSLEYTMSGTV-----SIKTDVFGFGVLV 200
+G +++ + S K+DV+ FGVL+
Sbjct: 189 HGKWPVKWYAPECINYYKFSSKSDVWSFGVLM 220
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 71/152 (46%), Gaps = 22/152 (14%)
Query: 66 EFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMP----NKSLDSSFSGTFKDLLCL 121
E EA ++ +L +V+++G E +LV E NK L + K+++ L
Sbjct: 74 ELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIEL 132
Query: 122 -HKYS-------RLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGT 173
H+ S +HRDL A N+LL Q KISDFG+++ +E+ T
Sbjct: 133 VHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ----T 188
Query: 174 YGYMSLEYTMSGTV-----SIKTDVFGFGVLV 200
+G +++ + S K+DV+ FGVL+
Sbjct: 189 HGKWPVKWYAPECINYYKFSSKSDVWSFGVLM 220
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 90/199 (45%), Gaps = 48/199 (24%)
Query: 39 VILVGKFPNEQEVAIKRLAWTSGQGRVEFQN---EAKLIAKLQYTNLVKLLGCSIHGEER 95
VIL QE A+K ++ + + + ++ E +L+ +L + N++KL
Sbjct: 48 VILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKL---------- 97
Query: 96 LLVYEFMPNKS----LDSSFSGT--FKDLLCLHKYSRL-------------------RVI 130
YEF +K + ++G F +++ ++S + +++
Sbjct: 98 ---YEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIV 154
Query: 131 HRDLKASNILLDDQ---LNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTV 187
HRDLK N+LL+ + N +I DFG++ F E+ +GT Y++ E + GT
Sbjct: 155 HRDLKPENLLLESKSKDANIRIIDFGLSTHF---EASKKMKDKIGTAYYIAPE-VLHGTY 210
Query: 188 SIKTDVFGFGVLVLKIVCG 206
K DV+ GV++ ++ G
Sbjct: 211 DEKCDVWSTGVILYILLSG 229
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Query: 129 VIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVS 188
+I+RDLK NI+L+ Q + K++DFG+ + G T+ GT YM+ E M +
Sbjct: 142 IIYRDLKPENIMLNHQGHVKLTDFGLCK--ESIHDGTVTHXFCGTIEYMAPEILMRSGHN 199
Query: 189 IKTDVFGFGVLVLKIVCG 206
D + G L+ ++ G
Sbjct: 200 RAVDWWSLGALMYDMLTG 217
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 71/152 (46%), Gaps = 22/152 (14%)
Query: 66 EFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMP----NKSLDSSFSGTFKDLLCL 121
E EA ++ +L +V+++G E +LV E NK L + K+++ L
Sbjct: 64 ELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIEL 122
Query: 122 -HKYS-------RLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGT 173
H+ S +HRDL A N+LL Q KISDFG+++ +E+ T
Sbjct: 123 VHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ----T 178
Query: 174 YGYMSLEYTMSGTV-----SIKTDVFGFGVLV 200
+G +++ + S K+DV+ FGVL+
Sbjct: 179 HGKWPVKWYAPECINYYKFSSKSDVWSFGVLM 210
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 90/199 (45%), Gaps = 48/199 (24%)
Query: 39 VILVGKFPNEQEVAIKRLAWTSGQGRVEFQN---EAKLIAKLQYTNLVKLLGCSIHGEER 95
VIL QE A+K ++ + + + ++ E +L+ +L + N++KL
Sbjct: 42 VILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKL---------- 91
Query: 96 LLVYEFMPNKS----LDSSFSGT--FKDLLCLHKYSRL-------------------RVI 130
YEF +K + ++G F +++ ++S + +++
Sbjct: 92 ---YEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIV 148
Query: 131 HRDLKASNILLDDQ---LNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTV 187
HRDLK N+LL+ + N +I DFG++ F E+ +GT Y++ E + GT
Sbjct: 149 HRDLKPENLLLESKSKDANIRIIDFGLSTHF---EASKKMKDKIGTAYYIAPE-VLHGTY 204
Query: 188 SIKTDVFGFGVLVLKIVCG 206
K DV+ GV++ ++ G
Sbjct: 205 DEKCDVWSTGVILYILLSG 223
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 71/152 (46%), Gaps = 22/152 (14%)
Query: 66 EFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMP----NKSLDSSFSGTFKDLLCL 121
E EA ++ +L +V+++G E +LV E NK L + K+++ L
Sbjct: 58 ELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIEL 116
Query: 122 -HKYS-------RLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGT 173
H+ S +HRDL A N+LL Q KISDFG+++ +E+ T
Sbjct: 117 VHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ----T 172
Query: 174 YGYMSLEYTMSGTV-----SIKTDVFGFGVLV 200
+G +++ + S K+DV+ FGVL+
Sbjct: 173 HGKWPVKWYAPECINYYKFSSKSDVWSFGVLM 204
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 71/152 (46%), Gaps = 22/152 (14%)
Query: 66 EFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMP----NKSLDSSFSGTFKDLLCL 121
E EA ++ +L +V+++G E +LV E NK L + K+++ L
Sbjct: 52 ELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIEL 110
Query: 122 -HKYS-------RLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGT 173
H+ S +HRDL A N+LL Q KISDFG+++ +E+ T
Sbjct: 111 VHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ----T 166
Query: 174 YGYMSLEYTMSGTV-----SIKTDVFGFGVLV 200
+G +++ + S K+DV+ FGVL+
Sbjct: 167 HGKWPVKWYAPECINYYKFSSKSDVWSFGVLM 198
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Query: 129 VIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVS 188
+I+RDLK NI+L+ Q + K++DFG+ + G T+ GT YM+ E M +
Sbjct: 142 IIYRDLKPENIMLNHQGHVKLTDFGLCK--ESIHDGTVTHTFCGTIEYMAPEILMRSGHN 199
Query: 189 IKTDVFGFGVLVLKIVCG 206
D + G L+ ++ G
Sbjct: 200 RAVDWWSLGALMYDMLTG 217
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 63/134 (47%), Gaps = 26/134 (19%)
Query: 49 QEVAIKRLAWTSGQGRVEFQ--NEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPN-- 104
+ VAIKR+ + V E L+ +LQ+ N+++L H L++E+ N
Sbjct: 60 ETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHLIFEYAENDL 119
Query: 105 -KSLDSSFSGTFKDL------------LCLHKYSRLRVIHRDLKASNILL--DDQLNT-- 147
K +D + + + + C +SR R +HRDLK N+LL D T
Sbjct: 120 KKYMDKNPDVSMRVIKSFLYQLINGVNFC---HSR-RCLHRDLKPQNLLLSVSDASETPV 175
Query: 148 -KISDFGMARIFGV 160
KI DFG+AR FG+
Sbjct: 176 LKIGDFGLARAFGI 189
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 71/152 (46%), Gaps = 22/152 (14%)
Query: 66 EFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMP----NKSLDSSFSGTFKDLLCL 121
E EA ++ +L +V+++G E +LV E NK L + K+++ L
Sbjct: 54 ELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIEL 112
Query: 122 -HKYS-------RLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGT 173
H+ S +HRDL A N+LL Q KISDFG+++ +E+ T
Sbjct: 113 VHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ----T 168
Query: 174 YGYMSLEYTMSGTV-----SIKTDVFGFGVLV 200
+G +++ + S K+DV+ FGVL+
Sbjct: 169 HGKWPVKWYAPECINYYKFSSKSDVWSFGVLM 200
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 75/186 (40%), Gaps = 40/186 (21%)
Query: 48 EQEVAIKRLAWTSGQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSL 107
E+ VAIK+L+ FQN+ AK Y LV L+ C H L+ F P KSL
Sbjct: 51 ERNVAIKKLSRP-------FQNQTH--AKRAYRELV-LMKCVNHKNIIGLLNVFTPQKSL 100
Query: 108 DS--------------------------SFSGTFKDLLCLHKY-SRLRVIHRDLKASNIL 140
+ S +LC K+ +IHRDLK SNI+
Sbjct: 101 EEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIV 160
Query: 141 LDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLV 200
+ KI DFG+AR G S +V Y Y + E + D++ G ++
Sbjct: 161 VKSDCTLKILDFGLARTAGT--SFMMVPFVVTRY-YRAPEVILGMGYKENVDIWSVGCIM 217
Query: 201 LKIVCG 206
+++ G
Sbjct: 218 GEMIKG 223
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 71/152 (46%), Gaps = 22/152 (14%)
Query: 66 EFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMP----NKSLDSSFSGTFKDLLCL 121
E EA ++ +L +V+++G E +LV E NK L + K+++ L
Sbjct: 416 ELLAEANVMQQLDNPYIVRMIGI-CEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIEL 474
Query: 122 -HKYS-------RLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGT 173
H+ S +HRDL A N+LL Q KISDFG+++ +E+ T
Sbjct: 475 VHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ----T 530
Query: 174 YGYMSLEYTMSGTV-----SIKTDVFGFGVLV 200
+G +++ + S K+DV+ FGVL+
Sbjct: 531 HGKWPVKWYAPECINYYKFSSKSDVWSFGVLM 562
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 90/199 (45%), Gaps = 48/199 (24%)
Query: 39 VILVGKFPNEQEVAIKRLAWTSGQGRVEFQN---EAKLIAKLQYTNLVKLLGCSIHGEER 95
VIL QE A+K ++ + + + ++ E +L+ +L + N++KL
Sbjct: 65 VILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKL---------- 114
Query: 96 LLVYEFMPNKS----LDSSFSGT--FKDLLCLHKYSRL-------------------RVI 130
YEF +K + ++G F +++ ++S + +++
Sbjct: 115 ---YEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIV 171
Query: 131 HRDLKASNILLDDQ---LNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTV 187
HRDLK N+LL+ + N +I DFG++ F E+ +GT Y++ E + GT
Sbjct: 172 HRDLKPENLLLESKSKDANIRIIDFGLSTHF---EASKKMKDKIGTAYYIAPE-VLHGTY 227
Query: 188 SIKTDVFGFGVLVLKIVCG 206
K DV+ GV++ ++ G
Sbjct: 228 DEKCDVWSTGVILYILLSG 246
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 71/152 (46%), Gaps = 22/152 (14%)
Query: 66 EFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMP----NKSLDSSFSGTFKDLLCL 121
E EA ++ +L +V+++G E +LV E NK L + K+++ L
Sbjct: 417 ELLAEANVMQQLDNPYIVRMIGI-CEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIEL 475
Query: 122 -HKYS-------RLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGT 173
H+ S +HRDL A N+LL Q KISDFG+++ +E+ T
Sbjct: 476 VHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ----T 531
Query: 174 YGYMSLEYTMSGTV-----SIKTDVFGFGVLV 200
+G +++ + S K+DV+ FGVL+
Sbjct: 532 HGKWPVKWYAPECINYYKFSSKSDVWSFGVLM 563
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 90/199 (45%), Gaps = 48/199 (24%)
Query: 39 VILVGKFPNEQEVAIKRLAWTSGQGRVEFQN---EAKLIAKLQYTNLVKLLGCSIHGEER 95
VIL QE A+K ++ + + + ++ E +L+ +L + N++KL
Sbjct: 66 VILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKL---------- 115
Query: 96 LLVYEFMPNKS----LDSSFSGT--FKDLLCLHKYSRL-------------------RVI 130
YEF +K + ++G F +++ ++S + +++
Sbjct: 116 ---YEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIV 172
Query: 131 HRDLKASNILLDDQ---LNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTV 187
HRDLK N+LL+ + N +I DFG++ F E+ +GT Y++ E + GT
Sbjct: 173 HRDLKPENLLLESKSKDANIRIIDFGLSTHF---EASKKMKDKIGTAYYIAPE-VLHGTY 228
Query: 188 SIKTDVFGFGVLVLKIVCG 206
K DV+ GV++ ++ G
Sbjct: 229 DEKCDVWSTGVILYILLSG 247
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 89/199 (44%), Gaps = 48/199 (24%)
Query: 39 VILVGKFPNEQEVAIKRLAWTSGQGRVEFQN---EAKLIAKLQYTNLVKLLGCSIHGEER 95
VIL QE A+K ++ + + + ++ E +L+ +L + N+ KL
Sbjct: 42 VILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIXKL---------- 91
Query: 96 LLVYEFMPNKS----LDSSFSGT--FKDLLCLHKYSRL-------------------RVI 130
YEF +K + ++G F +++ ++S + +++
Sbjct: 92 ---YEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYXHKNKIV 148
Query: 131 HRDLKASNILLDDQ---LNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTV 187
HRDLK N+LL+ + N +I DFG++ F E+ +GT Y++ E + GT
Sbjct: 149 HRDLKPENLLLESKSKDANIRIIDFGLSTHF---EASKKXKDKIGTAYYIAPE-VLHGTY 204
Query: 188 SIKTDVFGFGVLVLKIVCG 206
K DV+ GV++ ++ G
Sbjct: 205 DEKCDVWSTGVILYILLSG 223
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 64/150 (42%), Gaps = 17/150 (11%)
Query: 69 NEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSLDSSFS--GTFKD--------- 117
NE +++ + + LVKL +V E++ + S G F +
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQ 149
Query: 118 -LLCLHKYSRLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGY 176
+L L +I+RDLK N+L+D Q +++DFG A+ T + GT
Sbjct: 150 IVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEA 204
Query: 177 MSLEYTMSGTVSIKTDVFGFGVLVLKIVCG 206
++ E +S + D + GVL+ ++ G
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 76/187 (40%), Gaps = 40/187 (21%)
Query: 48 EQEVAIKRLAWTSGQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSL 107
++ VAIK+L+ FQN+ AK Y LV L+ C H L+ F P K+L
Sbjct: 43 DRNVAIKKLSRP-------FQNQTH--AKRAYRELV-LMKCVNHKNIISLLNVFTPQKTL 92
Query: 108 DS--------------------------SFSGTFKDLLCLHKY-SRLRVIHRDLKASNIL 140
+ S +LC K+ +IHRDLK SNI+
Sbjct: 93 EEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIV 152
Query: 141 LDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLV 200
+ KI DFG+AR G S T +V Y Y + E + D++ G ++
Sbjct: 153 VKSDCTLKILDFGLARTAGT--SFMMTPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIM 209
Query: 201 LKIVCGK 207
++V K
Sbjct: 210 GEMVRHK 216
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 82/190 (43%), Gaps = 36/190 (18%)
Query: 40 ILVGKFPNEQEVAIKRLAWTSGQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVY 99
+L G+ + + K+L S + + + EA++ L++ N+V+L L++
Sbjct: 44 VLAGQEYAAKIINTKKL---SARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIF 100
Query: 100 EFMPNKSLDSSFSGTFKDLLCLHKYS-------------------RLRVIHRDLKASNIL 140
+ + L F+D++ YS ++ V+HRDLK N+L
Sbjct: 101 DLVTGGEL-------FEDIVAREYYSEADASHCIQQILEAVLHCHQMGVVHRDLKPENLL 153
Query: 141 LDDQLN---TKISDFGMA-RIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGF 196
L +L K++DFG+A + G ++ GT GY+S E D++
Sbjct: 154 LASKLKGAAVKLADFGLAIEVEGEQQAWFG---FAGTPGYLSPEVLRKDPYGKPVDLWAC 210
Query: 197 GVLVLKIVCG 206
GV++ ++ G
Sbjct: 211 GVILYILLVG 220
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 76/187 (40%), Gaps = 40/187 (21%)
Query: 48 EQEVAIKRLAWTSGQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSL 107
++ VAIK+L+ FQN+ AK Y LV L+ C H L+ F P K+L
Sbjct: 49 DRNVAIKKLSRP-------FQNQTH--AKRAYRELV-LMKCVNHKNIISLLNVFTPQKTL 98
Query: 108 DS--------------------------SFSGTFKDLLCLHKY-SRLRVIHRDLKASNIL 140
+ S +LC K+ +IHRDLK SNI+
Sbjct: 99 EEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIV 158
Query: 141 LDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLV 200
+ KI DFG+AR G S T +V Y Y + E + D++ G ++
Sbjct: 159 VKSDCTLKILDFGLARTAGT--SFMMTPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIM 215
Query: 201 LKIVCGK 207
++V K
Sbjct: 216 GEMVRHK 222
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 76/187 (40%), Gaps = 40/187 (21%)
Query: 48 EQEVAIKRLAWTSGQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSL 107
++ VAIK+L+ FQN+ AK Y LV L+ C H L+ F P K+L
Sbjct: 42 DRNVAIKKLSRP-------FQNQTH--AKRAYRELV-LMKCVNHKNIISLLNVFTPQKTL 91
Query: 108 DS--------------------------SFSGTFKDLLCLHKY-SRLRVIHRDLKASNIL 140
+ S +LC K+ +IHRDLK SNI+
Sbjct: 92 EEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIV 151
Query: 141 LDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLV 200
+ KI DFG+AR G S T +V Y Y + E + D++ G ++
Sbjct: 152 VKSDCTLKILDFGLARTAGT--SFMMTPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIM 208
Query: 201 LKIVCGK 207
++V K
Sbjct: 209 GEMVRHK 215
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 76/187 (40%), Gaps = 40/187 (21%)
Query: 48 EQEVAIKRLAWTSGQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSL 107
++ VAIK+L+ FQN+ AK Y LV L+ C H L+ F P K+L
Sbjct: 43 DRNVAIKKLSRP-------FQNQTH--AKRAYRELV-LMKCVNHKNIISLLNVFTPQKTL 92
Query: 108 DS--------------------------SFSGTFKDLLCLHKY-SRLRVIHRDLKASNIL 140
+ S +LC K+ +IHRDLK SNI+
Sbjct: 93 EEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIV 152
Query: 141 LDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLV 200
+ KI DFG+AR G S T +V Y Y + E + D++ G ++
Sbjct: 153 VKSDCTLKILDFGLARTAGT--SFMMTPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIM 209
Query: 201 LKIVCGK 207
++V K
Sbjct: 210 GEMVRHK 216
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 76/187 (40%), Gaps = 40/187 (21%)
Query: 48 EQEVAIKRLAWTSGQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSL 107
++ VAIK+L+ FQN+ AK Y LV L+ C H L+ F P K+L
Sbjct: 48 DRNVAIKKLSRP-------FQNQTH--AKRAYRELV-LMKCVNHKNIISLLNVFTPQKTL 97
Query: 108 DS--------------------------SFSGTFKDLLCLHKY-SRLRVIHRDLKASNIL 140
+ S +LC K+ +IHRDLK SNI+
Sbjct: 98 EEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIV 157
Query: 141 LDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLV 200
+ KI DFG+AR G S T +V Y Y + E + D++ G ++
Sbjct: 158 VKSDCTLKILDFGLARTAGT--SFMMTPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIM 214
Query: 201 LKIVCGK 207
++V K
Sbjct: 215 GEMVRHK 221
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 76/187 (40%), Gaps = 40/187 (21%)
Query: 48 EQEVAIKRLAWTSGQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSL 107
++ VAIK+L+ FQN+ AK Y LV L+ C H L+ F P K+L
Sbjct: 50 DRNVAIKKLSRP-------FQNQTH--AKRAYRELV-LMKCVNHKNIISLLNVFTPQKTL 99
Query: 108 DS--------------------------SFSGTFKDLLCLHKY-SRLRVIHRDLKASNIL 140
+ S +LC K+ +IHRDLK SNI+
Sbjct: 100 EEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIV 159
Query: 141 LDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLV 200
+ KI DFG+AR G S T +V Y Y + E + D++ G ++
Sbjct: 160 VKSDCTLKILDFGLARTAGT--SFMMTPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIM 216
Query: 201 LKIVCGK 207
++V K
Sbjct: 217 GEMVRHK 223
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 76/187 (40%), Gaps = 40/187 (21%)
Query: 48 EQEVAIKRLAWTSGQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSL 107
++ VAIK+L+ FQN+ AK Y LV L+ C H L+ F P K+L
Sbjct: 50 DRNVAIKKLSRP-------FQNQTH--AKRAYRELV-LMKCVNHKNIISLLNVFTPQKTL 99
Query: 108 DS--------------------------SFSGTFKDLLCLHKY-SRLRVIHRDLKASNIL 140
+ S +LC K+ +IHRDLK SNI+
Sbjct: 100 EEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIV 159
Query: 141 LDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLV 200
+ KI DFG+AR G S T +V Y Y + E + D++ G ++
Sbjct: 160 VKSDCTLKILDFGLARTAGT--SFMMTPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIM 216
Query: 201 LKIVCGK 207
++V K
Sbjct: 217 GEMVRHK 223
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 76/187 (40%), Gaps = 40/187 (21%)
Query: 48 EQEVAIKRLAWTSGQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSL 107
++ VAIK+L+ FQN+ AK Y LV L+ C H L+ F P K+L
Sbjct: 49 DRNVAIKKLSRP-------FQNQTH--AKRAYRELV-LMKCVNHKNIISLLNVFTPQKTL 98
Query: 108 DS--------------------------SFSGTFKDLLCLHKY-SRLRVIHRDLKASNIL 140
+ S +LC K+ +IHRDLK SNI+
Sbjct: 99 EEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIV 158
Query: 141 LDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLV 200
+ KI DFG+AR G S T +V Y Y + E + D++ G ++
Sbjct: 159 VKSDCTLKILDFGLARTAGT--SFMMTPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIM 215
Query: 201 LKIVCGK 207
++V K
Sbjct: 216 GEMVRHK 222
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 48/89 (53%), Gaps = 10/89 (11%)
Query: 121 LHKYSRLRVIHRDLKASNILLDDQLN---TKISDFGMARIFGVNESGANTNRIVGTYGYM 177
LHK++ ++HRDLK N+LL+ + KI DFG++ F E G +GT Y+
Sbjct: 137 LHKHN---IVHRDLKPENLLLESKSRDALIKIVDFGLSAHF---EVGGKMKERLGTAYYI 190
Query: 178 SLEYTMSGTVSIKTDVFGFGVLVLKIVCG 206
+ E + K DV+ GV++ ++CG
Sbjct: 191 APE-VLRKKYDEKCDVWSCGVILYILLCG 218
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 76/187 (40%), Gaps = 40/187 (21%)
Query: 48 EQEVAIKRLAWTSGQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSL 107
++ VAIK+L+ FQN+ AK Y LV L+ C H L+ F P K+L
Sbjct: 87 DRNVAIKKLSRP-------FQNQTH--AKRAYRELV-LMKCVNHKNIISLLNVFTPQKTL 136
Query: 108 DS--------------------------SFSGTFKDLLCLHKY-SRLRVIHRDLKASNIL 140
+ S +LC K+ +IHRDLK SNI+
Sbjct: 137 EEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIV 196
Query: 141 LDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLV 200
+ KI DFG+AR G S T +V Y Y + E + D++ G ++
Sbjct: 197 VKSDCTLKILDFGLARTAGT--SFMMTPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIM 253
Query: 201 LKIVCGK 207
++V K
Sbjct: 254 GEMVRHK 260
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 51/102 (50%), Gaps = 11/102 (10%)
Query: 129 VIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVS 188
++HRDLK NIL+ K++DFG+ARI+ + +V T Y + E + T +
Sbjct: 133 IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMA---LFPVVVTLWYRAPEVLLQSTYA 189
Query: 189 IKTDVFGFGVLVLK------IVCGKKNNKSYHTERPLNLVGI 224
D++ G + + + CG N+++ + +L+G+
Sbjct: 190 TPVDMWSVGCIFAEMFRRKPLFCG--NSEADQLGKIFDLIGL 229
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 75/184 (40%), Gaps = 40/184 (21%)
Query: 48 EQEVAIKRLAWTSGQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSL 107
++ VAIK+L+ FQN+ AK Y LV L+ C H L+ F P K+L
Sbjct: 87 DRNVAIKKLSRP-------FQNQTH--AKRAYRELV-LMKCVNHKNIISLLNVFTPQKTL 136
Query: 108 DS--------------------------SFSGTFKDLLCLHKY-SRLRVIHRDLKASNIL 140
+ S +LC K+ +IHRDLK SNI+
Sbjct: 137 EEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIV 196
Query: 141 LDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLV 200
+ KI DFG+AR G S T +V Y Y + E + D++ G ++
Sbjct: 197 VKSDCTLKILDFGLARTAGT--SFMMTPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIM 253
Query: 201 LKIV 204
++V
Sbjct: 254 GEMV 257
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 89/202 (44%), Gaps = 27/202 (13%)
Query: 48 EQEVAIKRLAWTSGQGRVEFQNEAKLIAKLQYTNLVK---LLGCSIH------GEERLLV 98
++ VAIK++ T Q E K+I +L + N+VK +LG S G L
Sbjct: 36 DKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGSLTELN 95
Query: 99 YEFMPNKSLDSSFSGTFKDLLCLHKYSRL---------------RVIHRDLKASNILLD- 142
++ + +++ + + L +++RL V+HRDLK +N+ ++
Sbjct: 96 SVYIVQEYMETDLANVLEQGPLLEEHARLFMYQLLRGLKYIHSANVLHRDLKPANLFINT 155
Query: 143 DQLNTKISDFGMARIFGVNESG-ANTNRIVGTYGYMSLEYTMSGTVSIKT-DVFGFGVLV 200
+ L KI DFG+ARI + S + + + T Y S +S K D++ G +
Sbjct: 156 EDLVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIF 215
Query: 201 LKIVCGKKNNKSYHTERPLNLV 222
+++ GK H + L+
Sbjct: 216 AEMLTGKTLFAGAHELEQMQLI 237
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 74/183 (40%), Gaps = 40/183 (21%)
Query: 51 VAIKRLAWTSGQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSLDS- 109
VA+K+L+ FQN+ AK Y LV LL C H L+ F P K+L+
Sbjct: 52 VAVKKLSRP-------FQNQTH--AKRAYRELV-LLKCVNHKNIISLLNVFTPQKTLEEF 101
Query: 110 -------------------------SFSGTFKDLLCLHKY-SRLRVIHRDLKASNILLDD 143
S +LC K+ +IHRDLK SNI++
Sbjct: 102 QDVYLVMELMDANLCQVIHMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS 161
Query: 144 QLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKI 203
KI DFG+AR N T +V Y Y + E + + D++ G ++ ++
Sbjct: 162 DCTLKILDFGLARTACTN--FMMTPYVVTRY-YRAPEVILGMGYAANVDIWSVGCIMGEL 218
Query: 204 VCG 206
V G
Sbjct: 219 VKG 221
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 61/161 (37%), Gaps = 31/161 (19%)
Query: 51 VAIKRLAWTSGQGRV-----------EFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVY 99
VAIKR+ T GR E +L+ + N++ L +H EE +
Sbjct: 49 VAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHK 108
Query: 100 EFMPNKSLDSSFSGTFKD-----------------LLCLHKYSRLRVIHRDLKASNILLD 142
++ + + + + D LL LH V+HRDL NILL
Sbjct: 109 LYLVTELMRTDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLA 168
Query: 143 DQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTM 183
D + I DF +AR + + AN V Y + E M
Sbjct: 169 DNNDITICDFNLAR---EDTADANKTHYVTHRWYRAPELVM 206
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 78/186 (41%), Gaps = 32/186 (17%)
Query: 38 RVILVGKF-PNEQEVAIKRLAWTSGQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERL 96
+++ + KF +E + IK++A E +++ +L++ NLV LL
Sbjct: 29 QIVAIKKFLESEDDPVIKKIAL----------REIRMLKQLKHPNLVNLLEVFRRKRRLH 78
Query: 97 LVYEF---------------MPNKSLDSSFSGTFKDLLCLHKYSRLRVIHRDLKASNILL 141
LV+E+ +P + S T + + HK++ IHRD+K NIL+
Sbjct: 79 LVFEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHKHN---CIHRDVKPENILI 135
Query: 142 DDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGT-VSIKTDVFGFGVLV 200
K+ DFG AR+ + V T Y S E + T DV+ G +
Sbjct: 136 TKHSVIKLCDFGFARLLTGPSDYYDDE--VATRWYRSPELLVGDTQYGPPVDVWAIGCVF 193
Query: 201 LKIVCG 206
+++ G
Sbjct: 194 AELLSG 199
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 61/161 (37%), Gaps = 31/161 (19%)
Query: 51 VAIKRLAWTSGQGRV-----------EFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVY 99
VAIKR+ T GR E +L+ + N++ L +H EE +
Sbjct: 49 VAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHK 108
Query: 100 EFMPNKSLDSSFSGTFKD-----------------LLCLHKYSRLRVIHRDLKASNILLD 142
++ + + + + D LL LH V+HRDL NILL
Sbjct: 109 LYLVTELMRTDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLA 168
Query: 143 DQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTM 183
D + I DF +AR + + AN V Y + E M
Sbjct: 169 DNNDITICDFNLAR---EDTADANKTHYVTHRWYRAPELVM 206
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 78/186 (41%), Gaps = 40/186 (21%)
Query: 48 EQEVAIKRLAWTSGQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSL 107
E+ VAIK+L+ FQN+ AK Y LV L+ H L+ F P KSL
Sbjct: 49 ERNVAIKKLSRP-------FQNQTH--AKRAYRELV-LMKVVNHKNIIGLLNVFTPQKSL 98
Query: 108 -------------DSSFSGTFK-------------DLLCLHKY-SRLRVIHRDLKASNIL 140
D++ S + +LC K+ +IHRDLK SNI+
Sbjct: 99 EEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIV 158
Query: 141 LDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLV 200
+ KI DFG+AR G S T +V Y Y + E + D++ G ++
Sbjct: 159 VKSDATLKILDFGLARTAGT--SFMMTPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIM 215
Query: 201 LKIVCG 206
+++ G
Sbjct: 216 GEMIKG 221
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 48/89 (53%), Gaps = 10/89 (11%)
Query: 121 LHKYSRLRVIHRDLKASNILLDDQLN---TKISDFGMARIFGVNESGANTNRIVGTYGYM 177
LHK++ ++HRDLK N+LL+ + KI DFG++ F E G +GT Y+
Sbjct: 120 LHKHN---IVHRDLKPENLLLESKSRDALIKIVDFGLSAHF---EVGGKMKERLGTAYYI 173
Query: 178 SLEYTMSGTVSIKTDVFGFGVLVLKIVCG 206
+ E + K DV+ GV++ ++CG
Sbjct: 174 APE-VLRKKYDEKCDVWSCGVILYILLCG 201
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 65/128 (50%), Gaps = 22/128 (17%)
Query: 51 VAIKRLAWTSGQGRVEFQ--NEAKLIAKLQYTNLVKLLGCSIHGEERL-LVYEFMP---- 103
VA+KR+ V E L+ +L++ N+V+L +H +++L LV+EF
Sbjct: 30 VALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDV-LHSDKKLTLVFEFCDQDLK 88
Query: 104 ------NKSLDSSFSGTFKDLLCLHK-----YSRLRVIHRDLKASNILLDDQLNTKISDF 152
N LD +F L L K +SR V+HRDLK N+L++ K+++F
Sbjct: 89 KYFDSCNGDLDPEIVKSF--LFQLLKGLGFCHSR-NVLHRDLKPQNLLINRNGELKLANF 145
Query: 153 GMARIFGV 160
G+AR FG+
Sbjct: 146 GLARAFGI 153
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 77/186 (41%), Gaps = 40/186 (21%)
Query: 48 EQEVAIKRLAWTSGQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSL 107
E+ VAIK+L+ FQN+ AK Y LV L+ H L+ F P KSL
Sbjct: 49 ERNVAIKKLSRP-------FQNQTH--AKRAYRELV-LMKVVNHKNIIGLLNVFTPQKSL 98
Query: 108 -------------DSSFSGTFKDLLCLHKYSRL--------------RVIHRDLKASNIL 140
D++ S + L + S L +IHRDLK SNI+
Sbjct: 99 EEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIV 158
Query: 141 LDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLV 200
+ KI DFG+AR G S T +V Y Y + E + D++ G ++
Sbjct: 159 VKSDATLKILDFGLARTAGT--SFMMTPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIM 215
Query: 201 LKIVCG 206
+++ G
Sbjct: 216 GEMIKG 221
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 44/89 (49%), Gaps = 13/89 (14%)
Query: 129 VIHRDLKASNILLDDQLNTKISDFGMAR-------IFGVNE-----SGANTNRIVGTYGY 176
+IHR+LK NI +D+ N KI DFG+A+ I ++ S N +GT Y
Sbjct: 137 IIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAXY 196
Query: 177 MSLEY-TMSGTVSIKTDVFGFGVLVLKIV 204
++ E +G + K D + G++ + +
Sbjct: 197 VATEVLDGTGHYNEKIDXYSLGIIFFEXI 225
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 49/102 (48%), Gaps = 11/102 (10%)
Query: 117 DLLCLHKYSRLR---------VIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGAN- 166
D +C Y LR V+HRDLK SN+LL+ + KI DFG+AR+ +
Sbjct: 124 DHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGF 183
Query: 167 TNRIVGTYGYMSLEYTMSGTVSIKT-DVFGFGVLVLKIVCGK 207
V T Y + E ++ K+ D++ G ++ +++ +
Sbjct: 184 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 68/155 (43%), Gaps = 19/155 (12%)
Query: 67 FQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSL-----------DSSFSGTF 115
+NE ++ K+++ N+V L LV + + L + S
Sbjct: 53 LENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVI 112
Query: 116 KDLLCLHKYSRLR-VIHRDLKASNIL-LDDQLNTKI--SDFGMARIFGVNESGANTNRIV 171
+ +L KY ++HRDLK N+L L + N+KI +DFG++++ E +
Sbjct: 113 QQVLSAVKYLHENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKM----EQNGIMSTAC 168
Query: 172 GTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKIVCG 206
GT GY++ E S D + GV+ ++CG
Sbjct: 169 GTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCG 203
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 49/102 (48%), Gaps = 11/102 (10%)
Query: 117 DLLCLHKYSRLR---------VIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGAN- 166
D +C Y LR V+HRDLK SN+LL+ + KI DFG+AR+ +
Sbjct: 124 DHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGF 183
Query: 167 TNRIVGTYGYMSLEYTMSGTVSIKT-DVFGFGVLVLKIVCGK 207
V T Y + E ++ K+ D++ G ++ +++ +
Sbjct: 184 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 40/86 (46%), Gaps = 10/86 (11%)
Query: 129 VIHRDLKASNILLDDQLNTKISDFGMARIFGVNE----------SGANTNRIVGTYGYMS 178
++HRDLK SNI K+ DFG+ +E + A VGT YMS
Sbjct: 139 LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMS 198
Query: 179 LEYTMSGTVSIKTDVFGFGVLVLKIV 204
E + S K D+F G+++ +++
Sbjct: 199 PEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 49/102 (48%), Gaps = 11/102 (10%)
Query: 117 DLLCLHKYSRLR---------VIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGAN- 166
D +C Y LR V+HRDLK SN+LL+ + KI DFG+AR+ +
Sbjct: 124 DHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGF 183
Query: 167 TNRIVGTYGYMSLEYTMSGTVSIKT-DVFGFGVLVLKIVCGK 207
V T Y + E ++ K+ D++ G ++ +++ +
Sbjct: 184 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 49/102 (48%), Gaps = 11/102 (10%)
Query: 117 DLLCLHKYSRLR---------VIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGAN- 166
D +C Y LR V+HRDLK SN+LL+ + KI DFG+AR+ +
Sbjct: 128 DHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGF 187
Query: 167 TNRIVGTYGYMSLEYTMSGTVSIKT-DVFGFGVLVLKIVCGK 207
V T Y + E ++ K+ D++ G ++ +++ +
Sbjct: 188 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 49/102 (48%), Gaps = 11/102 (10%)
Query: 117 DLLCLHKYSRLR---------VIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGAN- 166
D +C Y LR V+HRDLK SN+LL+ + KI DFG+AR+ +
Sbjct: 128 DHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGF 187
Query: 167 TNRIVGTYGYMSLEYTMSGTVSIKT-DVFGFGVLVLKIVCGK 207
V T Y + E ++ K+ D++ G ++ +++ +
Sbjct: 188 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 49/102 (48%), Gaps = 11/102 (10%)
Query: 117 DLLCLHKYSRLR---------VIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGAN- 166
D +C Y LR V+HRDLK SN+LL+ + KI DFG+AR+ +
Sbjct: 124 DHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGF 183
Query: 167 TNRIVGTYGYMSLEYTMSGTVSIKT-DVFGFGVLVLKIVCGK 207
V T Y + E ++ K+ D++ G ++ +++ +
Sbjct: 184 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 77/187 (41%), Gaps = 40/187 (21%)
Query: 48 EQEVAIKRLAWTSGQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSL 107
++ VAIK+L+ FQN+ AK Y LV L+ C H L+ F P K+L
Sbjct: 42 DRNVAIKKLSRP-------FQNQTH--AKRAYRELV-LMKCVNHKNIISLLNVFTPQKTL 91
Query: 108 -------------DSSFSGTFKDLLCLHKYSRLR--------------VIHRDLKASNIL 140
D++ + L + S L +IHRDLK SNI+
Sbjct: 92 EEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLXGIKHLHSAGIIHRDLKPSNIV 151
Query: 141 LDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLV 200
+ KI DFG+AR G S T +V Y Y + E + D++ G ++
Sbjct: 152 VKSDXTLKILDFGLARTAGT--SFMMTPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIM 208
Query: 201 LKIVCGK 207
++V K
Sbjct: 209 GEMVRHK 215
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 46/106 (43%), Gaps = 20/106 (18%)
Query: 119 LCLHKYSRLR----------VIHRDLKASNILLDDQLNTKISDFGMARIFGVNE------ 162
+CLH + ++ ++HRDLK SNI K+ DFG+ +E
Sbjct: 165 VCLHIFIQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVL 224
Query: 163 ----SGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKIV 204
+ A VGT YMS E S K D+F G+++ +++
Sbjct: 225 TPMPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELL 270
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 49/102 (48%), Gaps = 11/102 (10%)
Query: 117 DLLCLHKYSRLR---------VIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGAN- 166
D +C Y LR V+HRDLK SN+LL+ + KI DFG+AR+ +
Sbjct: 128 DHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGF 187
Query: 167 TNRIVGTYGYMSLEYTMSGTVSIKT-DVFGFGVLVLKIVCGK 207
V T Y + E ++ K+ D++ G ++ +++ +
Sbjct: 188 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 49/102 (48%), Gaps = 11/102 (10%)
Query: 117 DLLCLHKYSRLR---------VIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGAN- 166
D +C Y LR V+HRDLK SN+LL+ + KI DFG+AR+ +
Sbjct: 129 DHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGF 188
Query: 167 TNRIVGTYGYMSLEYTMSGTVSIKT-DVFGFGVLVLKIVCGK 207
V T Y + E ++ K+ D++ G ++ +++ +
Sbjct: 189 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 49/102 (48%), Gaps = 11/102 (10%)
Query: 117 DLLCLHKYSRLR---------VIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGAN- 166
D +C Y LR V+HRDLK SN+LL+ + KI DFG+AR+ +
Sbjct: 122 DHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGF 181
Query: 167 TNRIVGTYGYMSLEYTMSGTVSIKT-DVFGFGVLVLKIVCGK 207
V T Y + E ++ K+ D++ G ++ +++ +
Sbjct: 182 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 49/102 (48%), Gaps = 11/102 (10%)
Query: 117 DLLCLHKYSRLR---------VIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGAN- 166
D +C Y LR V+HRDLK SN+LL+ + KI DFG+AR+ +
Sbjct: 130 DHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGF 189
Query: 167 TNRIVGTYGYMSLEYTMSGTVSIKT-DVFGFGVLVLKIVCGK 207
V T Y + E ++ K+ D++ G ++ +++ +
Sbjct: 190 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 231
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 49/102 (48%), Gaps = 11/102 (10%)
Query: 117 DLLCLHKYSRLR---------VIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGAN- 166
D +C Y LR V+HRDLK SN+LL+ + KI DFG+AR+ +
Sbjct: 121 DHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGF 180
Query: 167 TNRIVGTYGYMSLEYTMSGTVSIKT-DVFGFGVLVLKIVCGK 207
V T Y + E ++ K+ D++ G ++ +++ +
Sbjct: 181 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 222
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 49/102 (48%), Gaps = 11/102 (10%)
Query: 117 DLLCLHKYSRLR---------VIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGAN- 166
D +C Y LR V+HRDLK SN+LL+ + KI DFG+AR+ +
Sbjct: 128 DHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGF 187
Query: 167 TNRIVGTYGYMSLEYTMSGTVSIKT-DVFGFGVLVLKIVCGK 207
V T Y + E ++ K+ D++ G ++ +++ +
Sbjct: 188 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 41/80 (51%), Gaps = 5/80 (6%)
Query: 128 RVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTV 187
++I+RDLK SNI L D KI DFG+ ++ R GT YMS E S
Sbjct: 142 KLINRDLKPSNIFLVDTKQVKIGDFGLVTSL---KNDGKRXRSKGTLRYMSPEQISSQDY 198
Query: 188 SIKTDVFGFGVLVLKI--VC 205
+ D++ G+++ ++ VC
Sbjct: 199 GKEVDLYALGLILAELLHVC 218
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 73/183 (39%), Gaps = 40/183 (21%)
Query: 51 VAIKRLAWTSGQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSLDS- 109
VA+K+L+ FQN+ AK Y LV LL C H L+ F P K+L+
Sbjct: 50 VAVKKLSRP-------FQNQTH--AKRAYRELV-LLKCVNHKNIISLLNVFTPQKTLEEF 99
Query: 110 -------------------------SFSGTFKDLLCLHKY-SRLRVIHRDLKASNILLDD 143
S +LC K+ +IHRDLK SNI++
Sbjct: 100 QDVYLVMELMDANLCQVIHMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS 159
Query: 144 QLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKI 203
KI DFG+AR N T +V Y Y + E + D++ G ++ ++
Sbjct: 160 DCTLKILDFGLARTASTN--FMMTPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEL 216
Query: 204 VCG 206
V G
Sbjct: 217 VKG 219
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 70/169 (41%), Gaps = 31/169 (18%)
Query: 60 SGQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSLDSSFSGTFKDLL 119
S + + + EA++ L+++N+V+L LV++ + L F+D++
Sbjct: 43 SARDHQKLEREARICRLLKHSNIVRLHDSISEEGFHYLVFDLVTGGEL-------FEDIV 95
Query: 120 CLHKYS-------------------RLRVIHRDLKASNILLDDQLN---TKISDFGMARI 157
YS ++ V+HRDLK N+LL + K++DFG+A
Sbjct: 96 AREYYSEADASHCIQQILEAVLHCHQMGVVHRDLKPENLLLASKCKGAAVKLADFGLA-- 153
Query: 158 FGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKIVCG 206
V GT GY+S E D++ GV++ ++ G
Sbjct: 154 IEVQGDQQAWFGFAGTPGYLSPEVLRKEAYGKPVDIWACGVILYILLVG 202
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 49/102 (48%), Gaps = 11/102 (10%)
Query: 117 DLLCLHKYSRLR---------VIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGAN- 166
D +C Y LR V+HRDLK SN+LL+ + KI DFG+AR+ +
Sbjct: 122 DHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGF 181
Query: 167 TNRIVGTYGYMSLEYTMSGTVSIKT-DVFGFGVLVLKIVCGK 207
V T Y + E ++ K+ D++ G ++ +++ +
Sbjct: 182 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 49/102 (48%), Gaps = 11/102 (10%)
Query: 117 DLLCLHKYSRLR---------VIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGAN- 166
D +C Y LR V+HRDLK SN+LL+ + KI DFG+AR+ +
Sbjct: 144 DHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGF 203
Query: 167 TNRIVGTYGYMSLEYTMSGTVSIKT-DVFGFGVLVLKIVCGK 207
V T Y + E ++ K+ D++ G ++ +++ +
Sbjct: 204 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 67/154 (43%), Gaps = 19/154 (12%)
Query: 66 EFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSLDSSF---SGTFKDLLCLH 122
+F E + L + NL++L G + ++ V E P SL G F L L
Sbjct: 57 DFIREVNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFL-LGTLS 114
Query: 123 KYS-----------RLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGA--NTNR 169
+Y+ R IHRDL A N+LL + KI DFG+ R N+ +R
Sbjct: 115 RYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHR 174
Query: 170 IVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKI 203
V + + + E + T S +D + FGV + ++
Sbjct: 175 KV-PFAWCAPESLKTRTFSHASDTWMFGVTLWEM 207
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 49/102 (48%), Gaps = 11/102 (10%)
Query: 117 DLLCLHKYSRLR---------VIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGAN- 166
D +C Y LR V+HRDLK SN+LL+ + KI DFG+AR+ +
Sbjct: 126 DHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGF 185
Query: 167 TNRIVGTYGYMSLEYTMSGTVSIKT-DVFGFGVLVLKIVCGK 207
V T Y + E ++ K+ D++ G ++ +++ +
Sbjct: 186 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 77/187 (41%), Gaps = 40/187 (21%)
Query: 48 EQEVAIKRLAWTSGQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSL 107
++ VAIK+L+ FQN+ AK Y LV L+ C H L+ F P K+L
Sbjct: 49 DRNVAIKKLSRP-------FQNQTH--AKRAYRELV-LMKCVNHKNIISLLNVFTPQKTL 98
Query: 108 -------------DSSFSGTFKDLLCLHKYSRLR--------------VIHRDLKASNIL 140
D++ + L + S L +IHRDLK SNI+
Sbjct: 99 EEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLXGIKHLHSAGIIHRDLKPSNIV 158
Query: 141 LDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLV 200
+ KI DFG+AR G S T +V Y Y + E + D++ G ++
Sbjct: 159 VKSDXTLKILDFGLARTAGT--SFMMTPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIM 215
Query: 201 LKIVCGK 207
++V K
Sbjct: 216 GEMVRHK 222
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 49/102 (48%), Gaps = 11/102 (10%)
Query: 117 DLLCLHKYSRLR---------VIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGAN- 166
D +C Y LR V+HRDLK SN+LL+ + KI DFG+AR+ +
Sbjct: 132 DHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGF 191
Query: 167 TNRIVGTYGYMSLEYTMSGTVSIKT-DVFGFGVLVLKIVCGK 207
V T Y + E ++ K+ D++ G ++ +++ +
Sbjct: 192 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 233
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 49/102 (48%), Gaps = 11/102 (10%)
Query: 117 DLLCLHKYSRLR---------VIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGAN- 166
D +C Y LR V+HRDLK SN+LL+ + KI DFG+AR+ +
Sbjct: 124 DHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGF 183
Query: 167 TNRIVGTYGYMSLEYTMSGTVSIKT-DVFGFGVLVLKIVCGK 207
V T Y + E ++ K+ D++ G ++ +++ +
Sbjct: 184 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 49/102 (48%), Gaps = 11/102 (10%)
Query: 117 DLLCLHKYSRLR---------VIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGAN- 166
D +C Y LR V+HRDLK SN+LL+ + KI DFG+AR+ +
Sbjct: 126 DHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGF 185
Query: 167 TNRIVGTYGYMSLEYTMSGTVSIKT-DVFGFGVLVLKIVCGK 207
V T Y + E ++ K+ D++ G ++ +++ +
Sbjct: 186 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 67/154 (43%), Gaps = 19/154 (12%)
Query: 66 EFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSLDSSF---SGTFKDLLCLH 122
+F E + L + NL++L G + ++ V E P SL G F L L
Sbjct: 67 DFIREVNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFL-LGTLS 124
Query: 123 KYS-----------RLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGA--NTNR 169
+Y+ R IHRDL A N+LL + KI DFG+ R N+ +R
Sbjct: 125 RYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHR 184
Query: 170 IVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKI 203
V + + + E + T S +D + FGV + ++
Sbjct: 185 KV-PFAWCAPESLKTRTFSHASDTWMFGVTLWEM 217
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 67/154 (43%), Gaps = 19/154 (12%)
Query: 66 EFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSLDSSF---SGTFKDLLCLH 122
+F E + L + NL++L G + ++ V E P SL G F L L
Sbjct: 57 DFIREVNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFL-LGTLS 114
Query: 123 KYS-----------RLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESG--ANTNR 169
+Y+ R IHRDL A N+LL + KI DFG+ R N+ +R
Sbjct: 115 RYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHR 174
Query: 170 IVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKI 203
V + + + E + T S +D + FGV + ++
Sbjct: 175 KV-PFAWCAPESLKTRTFSHASDTWMFGVTLWEM 207
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 53/98 (54%), Gaps = 7/98 (7%)
Query: 122 HKYSRLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEY 181
H +S+L VIHRD+K SN+L++ K+ DFG++ + V++ + + G YM+ E
Sbjct: 124 HLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISG-YLVDDVAKDID--AGCKPYMAPER 180
Query: 182 T----MSGTVSIKTDVFGFGVLVLKIVCGKKNNKSYHT 215
S+K+D++ G+ ++++ + S+ T
Sbjct: 181 INPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGT 218
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 49/102 (48%), Gaps = 11/102 (10%)
Query: 117 DLLCLHKYSRLR---------VIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGAN- 166
D +C Y LR V+HRDLK SN+LL+ + KI DFG+AR+ +
Sbjct: 144 DHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGF 203
Query: 167 TNRIVGTYGYMSLEYTMSGTVSIKT-DVFGFGVLVLKIVCGK 207
V T Y + E ++ K+ D++ G ++ +++ +
Sbjct: 204 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 67/154 (43%), Gaps = 19/154 (12%)
Query: 66 EFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSLDSSF---SGTFKDLLCLH 122
+F E + L + NL++L G + ++ V E P SL G F L L
Sbjct: 61 DFIREVNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFL-LGTLS 118
Query: 123 KYS-----------RLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESG--ANTNR 169
+Y+ R IHRDL A N+LL + KI DFG+ R N+ +R
Sbjct: 119 RYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHR 178
Query: 170 IVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKI 203
V + + + E + T S +D + FGV + ++
Sbjct: 179 KV-PFAWCAPESLKTRTFSHASDTWMFGVTLWEM 211
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 65/138 (47%), Gaps = 24/138 (17%)
Query: 73 LIAKLQYTNLVKLLGCSIHGEERL--LVYEFMPNKSLDSSFSGTFKDLLCLHKYSRLRVI 130
L+ T+L KL+ GE+R+ LVY+ + K L +H +I
Sbjct: 107 LVMPFMGTDLGKLMKHEKLGEDRIQFLVYQML-------------KGLRYIHAAG---II 150
Query: 131 HRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIK 190
HRDLK N+ +++ KI DFG+AR ++ + V T Y + E ++ +
Sbjct: 151 HRDLKPGNLAVNEDCELKILDFGLAR-----QADSEMXGXVVTRWYRAPEVILNWMRYTQ 205
Query: 191 T-DVFGFGVLVLKIVCGK 207
T D++ G ++ +++ GK
Sbjct: 206 TVDIWSVGCIMAEMITGK 223
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 49/102 (48%), Gaps = 11/102 (10%)
Query: 117 DLLCLHKYSRLR---------VIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGAN- 166
D +C Y LR V+HRDLK SN+LL+ + KI DFG+AR+ +
Sbjct: 128 DHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGF 187
Query: 167 TNRIVGTYGYMSLEYTMSGTVSIKT-DVFGFGVLVLKIVCGK 207
V T Y + E ++ K+ D++ G ++ +++ +
Sbjct: 188 LXEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 49/102 (48%), Gaps = 11/102 (10%)
Query: 117 DLLCLHKYSRLR---------VIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGAN- 166
D +C Y LR V+HRDLK SN+LL+ + KI DFG+AR+ +
Sbjct: 129 DHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGF 188
Query: 167 TNRIVGTYGYMSLEYTMSGTVSIKT-DVFGFGVLVLKIVCGK 207
V T Y + E ++ K+ D++ G ++ +++ +
Sbjct: 189 LXEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 67/154 (43%), Gaps = 19/154 (12%)
Query: 66 EFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSLDSSF---SGTFKDLLCLH 122
+F E + L + NL++L G + ++ V E P SL G F L L
Sbjct: 57 DFIREVNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFL-LGTLS 114
Query: 123 KYS-----------RLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESG--ANTNR 169
+Y+ R IHRDL A N+LL + KI DFG+ R N+ +R
Sbjct: 115 RYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHR 174
Query: 170 IVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKI 203
V + + + E + T S +D + FGV + ++
Sbjct: 175 KV-PFAWCAPESLKTRTFSHASDTWMFGVTLWEM 207
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 73/170 (42%), Gaps = 33/170 (19%)
Query: 60 SGQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSLDSSFSGTFKDLL 119
S + + + EA++ L++ N+V+L L+++ + L F+D++
Sbjct: 50 SARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGEL-------FEDIV 102
Query: 120 CLHKYS-------------------RLRVIHRDLKASNILLDDQLN---TKISDFGMA-R 156
YS ++ V+HR+LK N+LL +L K++DFG+A
Sbjct: 103 AREYYSEADASHCIQQILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIE 162
Query: 157 IFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKIVCG 206
+ G ++ GT GY+S E D++ GV++ ++ G
Sbjct: 163 VEGEQQAWFG---FAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVG 209
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 67/154 (43%), Gaps = 19/154 (12%)
Query: 66 EFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSLDSSF---SGTFKDLLCLH 122
+F E + L + NL++L G + ++ V E P SL G F L L
Sbjct: 67 DFIREVNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFL-LGTLS 124
Query: 123 KYS-----------RLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESG--ANTNR 169
+Y+ R IHRDL A N+LL + KI DFG+ R N+ +R
Sbjct: 125 RYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHR 184
Query: 170 IVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKI 203
V + + + E + T S +D + FGV + ++
Sbjct: 185 KV-PFAWCAPESLKTRTFSHASDTWMFGVTLWEM 217
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 74/187 (39%), Gaps = 33/187 (17%)
Query: 44 KFPNEQEVAIKRLAWT--SGQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEF 101
K P QE A K + S + + + EA++ L++ N+V+L LV++
Sbjct: 25 KIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGFHYLVFDL 84
Query: 102 MPNKSLDSSFSGTFKDLLCLHKYSRLR-------------------VIHRDLKASNILLD 142
+ L F+D++ YS ++HRDLK N+LL
Sbjct: 85 VTGGEL-------FEDIVAREYYSEADASHCIQQILESVNHCHLNGIVHRDLKPENLLLA 137
Query: 143 DQ---LNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVL 199
+ K++DFG+A V GT GY+S E D++ GV+
Sbjct: 138 SKSKGAAVKLADFGLA--IEVQGDQQAWFGFAGTPGYLSPEVLRKDPYGKPVDMWACGVI 195
Query: 200 VLKIVCG 206
+ ++ G
Sbjct: 196 LYILLVG 202
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 63/137 (45%), Gaps = 23/137 (16%)
Query: 73 LIAKLQYTNLVKLLGCSIHGEE-RLLVYEFMPNKSLDSSFSGTFKDLLCLHKYSRLRVIH 131
L+ T+L K++G E+ + LVY+ + K L +H V+H
Sbjct: 106 LVMPFMQTDLQKIMGLKFSEEKIQYLVYQML-------------KGLKYIHSAG---VVH 149
Query: 132 RDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKT 191
RDLK N+ +++ KI DFG+AR + A V T Y + E +S +T
Sbjct: 150 RDLKPGNLAVNEDCELKILDFGLAR-----HADAEMTGYVVTRWYRAPEVILSWMHYNQT 204
Query: 192 -DVFGFGVLVLKIVCGK 207
D++ G ++ +++ GK
Sbjct: 205 VDIWSVGCIMAEMLTGK 221
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 74/187 (39%), Gaps = 33/187 (17%)
Query: 44 KFPNEQEVAIKRLAWT--SGQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEF 101
K P QE A K + S + + + EA++ L++ N+V+L LV++
Sbjct: 25 KIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGFHYLVFDL 84
Query: 102 MPNKSLDSSFSGTFKDLLCLHKYSRLR-------------------VIHRDLKASNILLD 142
+ L F+D++ YS ++HRDLK N+LL
Sbjct: 85 VTGGEL-------FEDIVAREYYSEADASHCIQQILESVNHCHLNGIVHRDLKPENLLLA 137
Query: 143 DQ---LNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVL 199
+ K++DFG+A V GT GY+S E D++ GV+
Sbjct: 138 SKSKGAAVKLADFGLA--IEVQGDQQAWFGFAGTPGYLSPEVLRKDPYGKPVDMWACGVI 195
Query: 200 VLKIVCG 206
+ ++ G
Sbjct: 196 LYILLVG 202
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 63/137 (45%), Gaps = 23/137 (16%)
Query: 73 LIAKLQYTNLVKLLGCSIHGEE-RLLVYEFMPNKSLDSSFSGTFKDLLCLHKYSRLRVIH 131
L+ T+L K++G E+ + LVY+ + K L +H V+H
Sbjct: 124 LVMPFMQTDLQKIMGMEFSEEKIQYLVYQML-------------KGLKYIHSAG---VVH 167
Query: 132 RDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKT 191
RDLK N+ +++ KI DFG+AR + A V T Y + E +S +T
Sbjct: 168 RDLKPGNLAVNEDCELKILDFGLAR-----HADAEMTGYVVTRWYRAPEVILSWMHYNQT 222
Query: 192 -DVFGFGVLVLKIVCGK 207
D++ G ++ +++ GK
Sbjct: 223 VDIWSVGCIMAEMLTGK 239
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 67/154 (43%), Gaps = 19/154 (12%)
Query: 66 EFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSLDSSF---SGTFKDLLCLH 122
+F E + L + NL++L G + ++ V E P SL G F L L
Sbjct: 61 DFIREVNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFL-LGTLS 118
Query: 123 KYS-----------RLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESG--ANTNR 169
+Y+ R IHRDL A N+LL + KI DFG+ R N+ +R
Sbjct: 119 RYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHR 178
Query: 170 IVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKI 203
V + + + E + T S +D + FGV + ++
Sbjct: 179 KV-PFAWCAPESLKTRTFSHASDTWMFGVTLWEM 211
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 18/29 (62%), Positives = 23/29 (79%)
Query: 128 RVIHRDLKASNILLDDQLNTKISDFGMAR 156
+VIHRDLK SN+L+++ KI DFGMAR
Sbjct: 179 QVIHRDLKPSNLLVNENCELKIGDFGMAR 207
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 49/102 (48%), Gaps = 11/102 (10%)
Query: 117 DLLCLHKYSRLR---------VIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGAN- 166
D +C Y LR V+HRDLK SN+LL+ + KI DFG+AR+ +
Sbjct: 126 DHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGF 185
Query: 167 TNRIVGTYGYMSLEYTMSGTVSIKT-DVFGFGVLVLKIVCGK 207
V T Y + E ++ K+ D++ G ++ +++ +
Sbjct: 186 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 85/202 (42%), Gaps = 53/202 (26%)
Query: 47 NEQEVAIKRLAWTSGQGRVEFQNEAKL--IAKLQYTNLVKLLGCSIHGEER--------- 95
+E+ VA+K ++ + Q F NE + + +++ N+ + I G+ER
Sbjct: 35 DERPVAVKVFSFANRQN---FINEKNIYRVPLMEHDNIARF----IVGDERVTADGRMEY 87
Query: 96 LLVYEFMPNKSLDSSFS--------------GTFKDLLCLH------KYSRLRVIHRDLK 135
LLV E+ PN SL S + L LH + + + HRDL
Sbjct: 88 LLVMEYYPNGSLXKYLSLHTSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLN 147
Query: 136 ASNILLDDQLNTKISDFGMA------RIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSI 189
+ N+L+ + ISDFG++ R+ E VGT YM+ E + G V++
Sbjct: 148 SRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPE-VLEGAVNL 206
Query: 190 K--------TDVFGFGVLVLKI 203
+ D++ G++ +I
Sbjct: 207 RDXESALKQVDMYALGLIYWEI 228
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 45/94 (47%), Gaps = 12/94 (12%)
Query: 129 VIHRDLKASNILLDDQL---NTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSG 185
++H DLK NILL + KI DFGM+R G I+GT Y++ E
Sbjct: 152 IVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIG---HACELREIMGTPEYLAPEILNYD 208
Query: 186 TVSIKTDVFGFGVLVLKIV------CGKKNNKSY 213
++ TD++ G++ ++ G+ N ++Y
Sbjct: 209 PITTATDMWNIGIIAYMLLTHTSPFVGEDNQETY 242
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 18/29 (62%), Positives = 23/29 (79%)
Query: 128 RVIHRDLKASNILLDDQLNTKISDFGMAR 156
+VIHRDLK SN+L+++ KI DFGMAR
Sbjct: 178 QVIHRDLKPSNLLVNENCELKIGDFGMAR 206
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 47/87 (54%), Gaps = 7/87 (8%)
Query: 122 HKYSRLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEY 181
H +S+L VIHRD+K SN+L++ K+ DFG++ + V+ + G YM+ E
Sbjct: 168 HLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISG-YLVDSVAKTID--AGCKPYMAPER 224
Query: 182 TMS----GTVSIKTDVFGFGVLVLKIV 204
S+K+D++ G+ ++++
Sbjct: 225 INPELNQKGYSVKSDIWSLGITMIELA 251
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 73/170 (42%), Gaps = 22/170 (12%)
Query: 68 QNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSLDSSFSGT--FKDLLC-LHKY 124
+ E +++ KL + ++K+ E+ +V E M L G K+ C L+ Y
Sbjct: 188 ETEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFY 246
Query: 125 SRL---------RVIHRDLKASNILLDDQLN---TKISDFGMARIFGVNESGANTNRIVG 172
L +IHRDLK N+LL Q KI+DFG ++I G + + G
Sbjct: 247 QMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG---ETSLMRTLCG 303
Query: 173 TYGYMSLEYTMS-GTVSI--KTDVFGFGVLVLKIVCGKKNNKSYHTERPL 219
T Y++ E +S GT D + GV++ + G + T+ L
Sbjct: 304 TPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSL 353
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 85/198 (42%), Gaps = 30/198 (15%)
Query: 49 QEVAIKRLA---WTSGQGR-----VEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYE 100
++VAIK ++ + G R + + E +++ KL + ++K+ E+ +V E
Sbjct: 36 KKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNF-FDAEDYYIVLE 94
Query: 101 FMPNKSLDSSFSGT--FKDLLC-LHKYSRL---------RVIHRDLKASNILLDDQLN-- 146
M L G K+ C L+ Y L +IHRDLK N+LL Q
Sbjct: 95 LMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDC 154
Query: 147 -TKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMS-GTVSI--KTDVFGFGVLVLK 202
KI+DFG ++I G + + GT Y++ E +S GT D + GV++
Sbjct: 155 LIKITDFGHSKILG---ETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFI 211
Query: 203 IVCGKKNNKSYHTERPLN 220
+ G + T+ L
Sbjct: 212 CLSGYPPFSEHRTQVSLK 229
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 73/171 (42%), Gaps = 22/171 (12%)
Query: 68 QNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSLDSSFSGT--FKDLLC-LHKY 124
+ E +++ KL + ++K+ E+ +V E M L G K+ C L+ Y
Sbjct: 63 ETEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFY 121
Query: 125 SRL---------RVIHRDLKASNILLDDQLN---TKISDFGMARIFGVNESGANTNRIVG 172
L +IHRDLK N+LL Q KI+DFG ++I G + + G
Sbjct: 122 QMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG---ETSLMRTLCG 178
Query: 173 TYGYMSLEYTMS-GTVSI--KTDVFGFGVLVLKIVCGKKNNKSYHTERPLN 220
T Y++ E +S GT D + GV++ + G + T+ L
Sbjct: 179 TPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLK 229
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 85/198 (42%), Gaps = 30/198 (15%)
Query: 49 QEVAIKRLA---WTSGQGR-----VEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYE 100
++VAIK ++ + G R + + E +++ KL + ++K+ E+ +V E
Sbjct: 36 KKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNF-FDAEDYYIVLE 94
Query: 101 FMPNKSLDSSFSGT--FKDLLC-LHKYSRL---------RVIHRDLKASNILLDDQLN-- 146
M L G K+ C L+ Y L +IHRDLK N+LL Q
Sbjct: 95 LMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDC 154
Query: 147 -TKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMS-GTVSI--KTDVFGFGVLVLK 202
KI+DFG ++I G + + GT Y++ E +S GT D + GV++
Sbjct: 155 LIKITDFGHSKILG---ETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFI 211
Query: 203 IVCGKKNNKSYHTERPLN 220
+ G + T+ L
Sbjct: 212 CLSGYPPFSEHRTQVSLK 229
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 73/171 (42%), Gaps = 22/171 (12%)
Query: 68 QNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSLDSSFSGT--FKDLLC-LHKY 124
+ E +++ KL + ++K+ E+ +V E M L G K+ C L+ Y
Sbjct: 62 ETEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFY 120
Query: 125 SRL---------RVIHRDLKASNILLDDQLN---TKISDFGMARIFGVNESGANTNRIVG 172
L +IHRDLK N+LL Q KI+DFG ++I G + + G
Sbjct: 121 QMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG---ETSLMRTLCG 177
Query: 173 TYGYMSLEYTMS-GTVSI--KTDVFGFGVLVLKIVCGKKNNKSYHTERPLN 220
T Y++ E +S GT D + GV++ + G + T+ L
Sbjct: 178 TPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLK 228
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 55/120 (45%), Gaps = 12/120 (10%)
Query: 117 DLLCLHKYSRLR---------VIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGAN- 166
D +C Y LR V+HRDLK SN+L++ + KI DFG+ARI
Sbjct: 144 DHICYFLYQILRGLKYIHSANVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGF 203
Query: 167 TNRIVGTYGYMSLEYTMSGTVSIKT-DVFGFGVLVLKIVCGKKNNKSYHTERPLN-LVGI 224
V T Y + E ++ K+ D++ G ++ +++ + H LN ++GI
Sbjct: 204 LTEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGI 263
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
Query: 129 VIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVS 188
+IHRDLK SNI++ KI DFG+AR G S T +V Y Y + E +
Sbjct: 147 IIHRDLKPSNIVVKSDXTLKILDFGLARTAGT--SFMMTPYVVTRY-YRAPEVILGMGYK 203
Query: 189 IKTDVFGFGVLVLKIVCGK 207
D++ G ++ ++V K
Sbjct: 204 ENVDIWSVGCIMGEMVRHK 222
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 73/171 (42%), Gaps = 22/171 (12%)
Query: 68 QNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSLDSSFSGT--FKDLLC-LHKY 124
+ E +++ KL + ++K+ E+ +V E M L G K+ C L+ Y
Sbjct: 69 ETEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFY 127
Query: 125 SRL---------RVIHRDLKASNILLDDQLN---TKISDFGMARIFGVNESGANTNRIVG 172
L +IHRDLK N+LL Q KI+DFG ++I G + + G
Sbjct: 128 QMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG---ETSLMRTLCG 184
Query: 173 TYGYMSLEYTMS-GTVSI--KTDVFGFGVLVLKIVCGKKNNKSYHTERPLN 220
T Y++ E +S GT D + GV++ + G + T+ L
Sbjct: 185 TPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLK 235
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 73/170 (42%), Gaps = 22/170 (12%)
Query: 68 QNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSLDSSFSGT--FKDLLC-LHKY 124
+ E +++ KL + ++K+ E+ +V E M L G K+ C L+ Y
Sbjct: 202 ETEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFY 260
Query: 125 SRL---------RVIHRDLKASNILLDDQLN---TKISDFGMARIFGVNESGANTNRIVG 172
L +IHRDLK N+LL Q KI+DFG ++I G + + G
Sbjct: 261 QMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG---ETSLMRTLCG 317
Query: 173 TYGYMSLEYTMS-GTVSI--KTDVFGFGVLVLKIVCGKKNNKSYHTERPL 219
T Y++ E +S GT D + GV++ + G + T+ L
Sbjct: 318 TPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSL 367
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 38/74 (51%)
Query: 130 IHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSI 189
IHRDL A NILL TKI DFG+AR + + +M+ E + +
Sbjct: 190 IHRDLAARNILLTHGRITKICDFGLARHIKNDSNYVVKGNARLPVKWMAPESIFNCVYTF 249
Query: 190 KTDVFGFGVLVLKI 203
++DV+ +G+ + ++
Sbjct: 250 ESDVWSYGIFLWEL 263
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 38/74 (51%)
Query: 130 IHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSI 189
IHRDL A NILL TKI DFG+AR + + +M+ E + +
Sbjct: 185 IHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTF 244
Query: 190 KTDVFGFGVLVLKI 203
++DV+ +G+ + ++
Sbjct: 245 ESDVWSYGIFLWEL 258
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 38/74 (51%)
Query: 130 IHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSI 189
IHRDL A NILL TKI DFG+AR + + +M+ E + +
Sbjct: 183 IHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTF 242
Query: 190 KTDVFGFGVLVLKI 203
++DV+ +G+ + ++
Sbjct: 243 ESDVWSYGIFLWEL 256
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 41.2 bits (95), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 81/189 (42%), Gaps = 30/189 (15%)
Query: 36 RDRVILVGKFPNEQEVAIKRLAWTSGQGRVEFQNEAKLIAKLQYTNLVKL---------- 85
RD+V V E+ + I R S + E ++ L + N++KL
Sbjct: 57 RDKVTHV-----ERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNY 111
Query: 86 ---LGCSIHGEERLLVYEFMPNKSLDSS--FSGTFKDLLCLHKYSRLRVIHRDLKASNIL 140
+ C GE + M +D++ + LHK++ ++HRDLK N+L
Sbjct: 112 YLVMECYKGGELFDEIIHRMKFNEVDAAVIIKQVLSGVTYLHKHN---IVHRDLKPENLL 168
Query: 141 LDDQLN---TKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFG 197
L+ + KI DFG++ +F E+ +GT Y++ E + K DV+ G
Sbjct: 169 LESKEKDALIKIVDFGLSAVF---ENQKKMKERLGTAYYIAPE-VLRKKYDEKCDVWSIG 224
Query: 198 VLVLKIVCG 206
V++ ++ G
Sbjct: 225 VILFILLAG 233
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 41.2 bits (95), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 38/74 (51%)
Query: 130 IHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSI 189
IHRDL A NILL TKI DFG+AR + + +M+ E + +
Sbjct: 190 IHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTF 249
Query: 190 KTDVFGFGVLVLKI 203
++DV+ +G+ + ++
Sbjct: 250 ESDVWSYGIFLWEL 263
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
Query: 129 VIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVS 188
+IHRDLK SNI++ KI DFG+AR G S T +V Y Y + E +
Sbjct: 147 IIHRDLKPSNIVVKSDXTLKILDFGLARTAGT--SFMMTPYVVTRY-YRAPEVILGMGYK 203
Query: 189 IKTDVFGFGVLVLKIVCGK 207
D++ G ++ ++V K
Sbjct: 204 ENVDIWSVGCIMGEMVRHK 222
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
Query: 129 VIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVS 188
+IHRDLK SNI++ KI DFG+AR G S T +V Y Y + E +
Sbjct: 147 IIHRDLKPSNIVVKSDXTLKILDFGLARTAGT--SFMMTPYVVTRY-YRAPEVILGMGYK 203
Query: 189 IKTDVFGFGVLVLKIVCGK 207
D++ G ++ ++V K
Sbjct: 204 ENVDIWSVGCIMGEMVRHK 222
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 66/156 (42%), Gaps = 18/156 (11%)
Query: 67 FQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSLDSSFSG-----------TF 115
F E ++A +V+L +V E+MP L + S T
Sbjct: 121 FWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTA 180
Query: 116 KDLLCLHKYSRLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESG-ANTNRIVGTY 174
+ +L L + IHRD+K N+LLD + K++DFG +N+ G + VGT
Sbjct: 181 EVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTC--MKMNKEGMVRCDTAVGTP 238
Query: 175 GYMSLEYTMS----GTVSIKTDVFGFGVLVLKIVCG 206
Y+S E S G + D + GV + +++ G
Sbjct: 239 DYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVG 274
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 66/156 (42%), Gaps = 18/156 (11%)
Query: 67 FQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSLDSSFSG-----------TF 115
F E ++A +V+L +V E+MP L + S T
Sbjct: 116 FWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTA 175
Query: 116 KDLLCLHKYSRLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESG-ANTNRIVGTY 174
+ +L L + IHRD+K N+LLD + K++DFG +N+ G + VGT
Sbjct: 176 EVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTC--MKMNKEGMVRCDTAVGTP 233
Query: 175 GYMSLEYTMS----GTVSIKTDVFGFGVLVLKIVCG 206
Y+S E S G + D + GV + +++ G
Sbjct: 234 DYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVG 269
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 67/153 (43%), Gaps = 17/153 (11%)
Query: 66 EFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSLDSSFSGTFKDL--LCLHK 123
+F +EA ++ L + ++VKL+G I E ++ E P L L L L
Sbjct: 55 KFMSEAVIMKNLDHPHIVKLIGI-IEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVL 113
Query: 124 YS-----------RLRVIHRDLKASNILLDDQLNTKISDFGMAR-IFGVNESGANTNRIV 171
YS + +HRD+ NIL+ K+ DFG++R I + A+ R+
Sbjct: 114 YSLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRL- 172
Query: 172 GTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKIV 204
+MS E + +DV+ F V + +I+
Sbjct: 173 -PIKWMSPESINFRRFTTASDVWMFAVCMWEIL 204
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 46/87 (52%), Gaps = 5/87 (5%)
Query: 124 YSRLRVIHRDLKASNILL-DDQLNTKISDFGMARIF---GVNESGANTNRIVGTYGYMSL 179
+SR R++H D+KA N+LL D + + DFG A G+ +S + I GT +M+
Sbjct: 202 HSR-RILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDYIPGTETHMAP 260
Query: 180 EYTMSGTVSIKTDVFGFGVLVLKIVCG 206
E + + K DV+ ++L ++ G
Sbjct: 261 EVVLGRSCDAKVDVWSSCCMMLHMLNG 287
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 38/74 (51%)
Query: 130 IHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSI 189
IHRDL A NILL TKI DFG+AR + + +M+ E + +
Sbjct: 167 IHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTF 226
Query: 190 KTDVFGFGVLVLKI 203
++DV+ +G+ + ++
Sbjct: 227 ESDVWSYGIFLWEL 240
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 67/153 (43%), Gaps = 17/153 (11%)
Query: 66 EFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSLDSSFSGTFKDL--LCLHK 123
+F +EA ++ L + ++VKL+G I E ++ E P L L L L
Sbjct: 71 KFMSEAVIMKNLDHPHIVKLIGI-IEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVL 129
Query: 124 YS-----------RLRVIHRDLKASNILLDDQLNTKISDFGMAR-IFGVNESGANTNRIV 171
YS + +HRD+ NIL+ K+ DFG++R I + A+ R+
Sbjct: 130 YSLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRL- 188
Query: 172 GTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKIV 204
+MS E + +DV+ F V + +I+
Sbjct: 189 -PIKWMSPESINFRRFTTASDVWMFAVCMWEIL 220
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 66/156 (42%), Gaps = 18/156 (11%)
Query: 67 FQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSLDSSFSG-----------TF 115
F E ++A +V+L +V E+MP L + S T
Sbjct: 121 FWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTA 180
Query: 116 KDLLCLHKYSRLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESG-ANTNRIVGTY 174
+ +L L + IHRD+K N+LLD + K++DFG +N+ G + VGT
Sbjct: 181 EVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTC--MKMNKEGMVRCDTAVGTP 238
Query: 175 GYMSLEYTMS----GTVSIKTDVFGFGVLVLKIVCG 206
Y+S E S G + D + GV + +++ G
Sbjct: 239 DYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVG 274
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 67/153 (43%), Gaps = 17/153 (11%)
Query: 66 EFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSLDSSFSGTFKDL--LCLHK 123
+F +EA ++ L + ++VKL+G I E ++ E P L L L L
Sbjct: 59 KFMSEAVIMKNLDHPHIVKLIGI-IEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVL 117
Query: 124 YS-----------RLRVIHRDLKASNILLDDQLNTKISDFGMAR-IFGVNESGANTNRIV 171
YS + +HRD+ NIL+ K+ DFG++R I + A+ R+
Sbjct: 118 YSLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRL- 176
Query: 172 GTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKIV 204
+MS E + +DV+ F V + +I+
Sbjct: 177 -PIKWMSPESINFRRFTTASDVWMFAVCMWEIL 208
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 34/54 (62%), Gaps = 3/54 (5%)
Query: 121 LHKYSRLRVIHRDLKASNILLDDQLNTKISDFGMARIFGV---NESGANTNRIV 171
L+ R +++HRD+KA+N+L+ K++DFG+AR F + ++ NR+V
Sbjct: 138 LYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVV 191
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 34/54 (62%), Gaps = 3/54 (5%)
Query: 121 LHKYSRLRVIHRDLKASNILLDDQLNTKISDFGMARIFGV---NESGANTNRIV 171
L+ R +++HRD+KA+N+L+ K++DFG+AR F + ++ NR+V
Sbjct: 137 LYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVV 190
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 34/54 (62%), Gaps = 3/54 (5%)
Query: 121 LHKYSRLRVIHRDLKASNILLDDQLNTKISDFGMARIFGV---NESGANTNRIV 171
L+ R +++HRD+KA+N+L+ K++DFG+AR F + ++ NR+V
Sbjct: 138 LYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVV 191
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 34/54 (62%), Gaps = 3/54 (5%)
Query: 121 LHKYSRLRVIHRDLKASNILLDDQLNTKISDFGMARIFGV---NESGANTNRIV 171
L+ R +++HRD+KA+N+L+ K++DFG+AR F + ++ NR+V
Sbjct: 138 LYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVV 191
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 80/170 (47%), Gaps = 20/170 (11%)
Query: 54 KRLAWTS-GQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLV---------YEFMP 103
+RL+ + G R E + E ++ ++++ N++ L + + +L+ ++F+
Sbjct: 48 RRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLA 107
Query: 104 NK-SLDSSFSGTF-KDLL-CLHKYSRLRVIHRDLKASNILLDDQ----LNTKISDFGMAR 156
K SL + F K +L +H R+ H DLK NI+L D+ K+ DFG+A
Sbjct: 108 EKESLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAH 167
Query: 157 IFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKIVCG 206
E+G I GT +++ E + ++ D++ GV+ ++ G
Sbjct: 168 KI---EAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 77/189 (40%), Gaps = 34/189 (17%)
Query: 42 VGKFPNEQEVA-IKRLAWTSGQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYE 100
V K P ++ A I S + + + EA++ L++ N+V+L LV++
Sbjct: 51 VKKTPTQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGFHYLVFD 110
Query: 101 FMPNKSLDSSFSGTFKDLLCLHKYSRLR-------------------VIHRDLKASNILL 141
+ L F+D++ YS ++HRDLK N+LL
Sbjct: 111 LVTGGEL-------FEDIVAREYYSEADASHCIHQILESVNHIHQHDIVHRDLKPENLLL 163
Query: 142 DDQLN---TKISDFGMA-RIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFG 197
+ K++DFG+A + G ++ GT GY+S E D++ G
Sbjct: 164 ASKCKGAAVKLADFGLAIEVQGEQQAWFG---FAGTPGYLSPEVLRKDPYGKPVDIWACG 220
Query: 198 VLVLKIVCG 206
V++ ++ G
Sbjct: 221 VILYILLVG 229
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 56/130 (43%), Gaps = 20/130 (15%)
Query: 81 NLVKLLGCSIHGEERLLVYEFMPNKSLDSSFSGTFKDLLCLHKYSRLRVIHRDLKASNIL 140
L+K +GC E+R L Y + L LH R++H D+KA N+L
Sbjct: 155 QLIKQMGCLP--EDRALYY-----------LGQALEGLEYLHTR---RILHGDVKADNVL 198
Query: 141 L-DDQLNTKISDFGMARIF---GVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGF 196
L D + DFG A G+ +S + I GT +M+ E M K D++
Sbjct: 199 LSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSS 258
Query: 197 GVLVLKIVCG 206
++L ++ G
Sbjct: 259 CCMMLHMLNG 268
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 41/80 (51%), Gaps = 2/80 (2%)
Query: 127 LRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGT 186
L +++RDLK NILLD Q + ++DFG+ + E + T+ GT Y++ E
Sbjct: 158 LNIVYRDLKPENILLDSQGHIVLTDFGLCK--ENIEHNSTTSTFCGTPEYLAPEVLHKQP 215
Query: 187 VSIKTDVFGFGVLVLKIVCG 206
D + G ++ +++ G
Sbjct: 216 YDRTVDWWCLGAVLYEMLYG 235
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 56/130 (43%), Gaps = 20/130 (15%)
Query: 81 NLVKLLGCSIHGEERLLVYEFMPNKSLDSSFSGTFKDLLCLHKYSRLRVIHRDLKASNIL 140
L+K +GC E+R L Y + L LH R++H D+KA N+L
Sbjct: 153 QLIKQMGCLP--EDRALYY-----------LGQALEGLEYLHTR---RILHGDVKADNVL 196
Query: 141 L-DDQLNTKISDFGMARIF---GVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGF 196
L D + DFG A G+ +S + I GT +M+ E M K D++
Sbjct: 197 LSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSS 256
Query: 197 GVLVLKIVCG 206
++L ++ G
Sbjct: 257 CCMMLHMLNG 266
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 56/130 (43%), Gaps = 20/130 (15%)
Query: 81 NLVKLLGCSIHGEERLLVYEFMPNKSLDSSFSGTFKDLLCLHKYSRLRVIHRDLKASNIL 140
L+K +GC E+R L Y + L LH R++H D+KA N+L
Sbjct: 139 QLIKQMGCLP--EDRALYY-----------LGQALEGLEYLHTR---RILHGDVKADNVL 182
Query: 141 L-DDQLNTKISDFGMARIF---GVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGF 196
L D + DFG A G+ +S + I GT +M+ E M K D++
Sbjct: 183 LSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSS 242
Query: 197 GVLVLKIVCG 206
++L ++ G
Sbjct: 243 CCMMLHMLNG 252
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 80/170 (47%), Gaps = 20/170 (11%)
Query: 54 KRLAWTS-GQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLV---------YEFMP 103
+RL+ + G R E + E ++ ++++ N++ L + + +L+ ++F+
Sbjct: 41 RRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLA 100
Query: 104 NK-SLDSSFSGTF-KDLL-CLHKYSRLRVIHRDLKASNILLDDQ----LNTKISDFGMAR 156
K SL + F K +L +H R+ H DLK NI+L D+ K+ DFG+A
Sbjct: 101 EKESLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAH 160
Query: 157 IFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKIVCG 206
E+G I GT +++ E + ++ D++ GV+ ++ G
Sbjct: 161 KI---EAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 207
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/196 (20%), Positives = 80/196 (40%), Gaps = 32/196 (16%)
Query: 50 EVAIKRLAWTSGQGRV--EFQNEAKLIAKLQYTNLVKLLGCSIHGEER-----LLVYEFM 102
+VA+K + + R EF +EA + + N+++LLG I + +++ FM
Sbjct: 64 KVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGIPKPMVILPFM 123
Query: 103 PNKSLDS-----------------SFSGTFKDL-LCLHKYSRLRVIHRDLKASNILLDDQ 144
L + + D+ L + S +HRDL A N +L D
Sbjct: 124 KYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRNFLHRDLAARNCMLRDD 183
Query: 145 LNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKIV 204
+ ++DFG+++ + ++++E + K+DV+ FGV + +I
Sbjct: 184 MTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIA 243
Query: 205 C-------GKKNNKSY 213
G +N++ Y
Sbjct: 244 TRGMTPYPGVQNHEMY 259
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 76/177 (42%), Gaps = 32/177 (18%)
Query: 59 TSGQGRVEFQNEAKLIAKLQYTNLVKLLG-------------CSIHGEERLLVYEFMPNK 105
TS R +F EA + + + ++VKL+G C++ GE R + +
Sbjct: 47 TSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVWIIMELCTL-GELRSFLQVRKYSL 105
Query: 106 SLDSSFSGTFKDLLCLHKYSRLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGA 165
L S ++ L R +HRD+ A N+L+ K+ DFG++R
Sbjct: 106 DLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM------E 159
Query: 166 NTNRIVGTYGYMSLEYTMSGTVSIK-----TDVFGFGVLVLKIVC-------GKKNN 210
++ + G + +++ +++ + +DV+ FGV + +I+ G KNN
Sbjct: 160 DSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN 216
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 75/162 (46%), Gaps = 19/162 (11%)
Query: 61 GQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLV---------YEFMPNK-SLDSS 110
G R E + E ++ ++++ N++ L + + +L+ ++F+ K SL
Sbjct: 70 GVSREEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTED 129
Query: 111 FSGTF-KDLL-CLHKYSRLRVIHRDLKASNILLDDQ----LNTKISDFGMARIFGVNESG 164
+ F K +L +H R+ H DLK NI+L D+ K+ DFG+A E+G
Sbjct: 130 EATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKI---EAG 186
Query: 165 ANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKIVCG 206
I GT +++ E + ++ D++ GV+ ++ G
Sbjct: 187 NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 228
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 76/177 (42%), Gaps = 32/177 (18%)
Query: 59 TSGQGRVEFQNEAKLIAKLQYTNLVKLLG-------------CSIHGEERLLVYEFMPNK 105
TS R +F EA + + + ++VKL+G C++ GE R + +
Sbjct: 50 TSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVWIIMELCTL-GELRSFLQVRKFSL 108
Query: 106 SLDSSFSGTFKDLLCLHKYSRLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGA 165
L S ++ L R +HRD+ A N+L+ K+ DFG++R
Sbjct: 109 DLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM------E 162
Query: 166 NTNRIVGTYGYMSLEYTMSGTVSIK-----TDVFGFGVLVLKIVC-------GKKNN 210
++ + G + +++ +++ + +DV+ FGV + +I+ G KNN
Sbjct: 163 DSTXXKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN 219
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 6/81 (7%)
Query: 129 VIHRDLKASNILLDD---QLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSG 185
++HRDLK N+L KI+DFG+++I E + GT GY + E
Sbjct: 169 IVHRDLKPENLLYATPAPDAPLKIADFGLSKIV---EHQVLMKTVCGTPGYCAPEILRGC 225
Query: 186 TVSIKTDVFGFGVLVLKIVCG 206
+ D++ G++ ++CG
Sbjct: 226 AYGPEVDMWSVGIITYILLCG 246
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 65/153 (42%), Gaps = 16/153 (10%)
Query: 66 EFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSL----------DSSFSGTF 115
+ + E ++ A L + N+++L L+ E+ P L D + T
Sbjct: 69 QLRREIEIQAHLHHPNILRLYNYFYDRRRIYLILEYAPRGELYKELQKSCTFDEQRTATI 128
Query: 116 KDLLC--LHKYSRLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGT 173
+ L L +VIHRD+K N+LL + KI+DFG + V+ + GT
Sbjct: 129 MEELADALMYCHGKKVIHRDIKPENLLLGLKGELKIADFG----WSVHAPSLRRKTMCGT 184
Query: 174 YGYMSLEYTMSGTVSIKTDVFGFGVLVLKIVCG 206
Y+ E + K D++ GVL +++ G
Sbjct: 185 LDYLPPEMIEGRMHNEKVDLWCIGVLCYELLVG 217
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 76/177 (42%), Gaps = 32/177 (18%)
Query: 59 TSGQGRVEFQNEAKLIAKLQYTNLVKLLG-------------CSIHGEERLLVYEFMPNK 105
TS R +F EA + + + ++VKL+G C++ GE R + +
Sbjct: 50 TSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVWIIMELCTL-GELRSFLQVRKYSL 108
Query: 106 SLDSSFSGTFKDLLCLHKYSRLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGA 165
L S ++ L R +HRD+ A N+L+ K+ DFG++R
Sbjct: 109 DLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM------E 162
Query: 166 NTNRIVGTYGYMSLEYTMSGTVSIK-----TDVFGFGVLVLKIVC-------GKKNN 210
++ + G + +++ +++ + +DV+ FGV + +I+ G KNN
Sbjct: 163 DSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN 219
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 49/96 (51%), Gaps = 8/96 (8%)
Query: 118 LLCLHKYSRLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRI-VGTYGY 176
+L + +L +HRD+K N+LLD + +++DFG +N+ G + + VGT Y
Sbjct: 201 VLAIDSIHQLHYVHRDIKPDNVLLDVNGHIRLADFG--SCLKMNDDGTVQSSVAVGTPDY 258
Query: 177 MSLEYTMS-----GTVSIKTDVFGFGVLVLKIVCGK 207
+S E + G + D + GV + +++ G+
Sbjct: 259 ISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGE 294
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 76/177 (42%), Gaps = 32/177 (18%)
Query: 59 TSGQGRVEFQNEAKLIAKLQYTNLVKLLG-------------CSIHGEERLLVYEFMPNK 105
TS R +F EA + + + ++VKL+G C++ GE R + +
Sbjct: 50 TSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVWIIMELCTL-GELRSFLQVRKYSL 108
Query: 106 SLDSSFSGTFKDLLCLHKYSRLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGA 165
L S ++ L R +HRD+ A N+L+ K+ DFG++R
Sbjct: 109 DLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM------E 162
Query: 166 NTNRIVGTYGYMSLEYTMSGTVSIK-----TDVFGFGVLVLKIVC-------GKKNN 210
++ + G + +++ +++ + +DV+ FGV + +I+ G KNN
Sbjct: 163 DSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN 219
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 76/177 (42%), Gaps = 32/177 (18%)
Query: 59 TSGQGRVEFQNEAKLIAKLQYTNLVKLLG-------------CSIHGEERLLVYEFMPNK 105
TS R +F EA + + + ++VKL+G C++ GE R + +
Sbjct: 52 TSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVWIIMELCTL-GELRSFLQVRKYSL 110
Query: 106 SLDSSFSGTFKDLLCLHKYSRLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGA 165
L S ++ L R +HRD+ A N+L+ K+ DFG++R
Sbjct: 111 DLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM------E 164
Query: 166 NTNRIVGTYGYMSLEYTMSGTVSIK-----TDVFGFGVLVLKIVC-------GKKNN 210
++ + G + +++ +++ + +DV+ FGV + +I+ G KNN
Sbjct: 165 DSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN 221
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 49/96 (51%), Gaps = 8/96 (8%)
Query: 118 LLCLHKYSRLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRI-VGTYGY 176
+L + +L +HRD+K N+LLD + +++DFG +N+ G + + VGT Y
Sbjct: 185 VLAIDSIHQLHYVHRDIKPDNVLLDVNGHIRLADFG--SCLKMNDDGTVQSSVAVGTPDY 242
Query: 177 MSLEYTMS-----GTVSIKTDVFGFGVLVLKIVCGK 207
+S E + G + D + GV + +++ G+
Sbjct: 243 ISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGE 278
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 67/146 (45%), Gaps = 24/146 (16%)
Query: 65 VEFQNEAKLIAKLQYTNLVKLLGCSIHGEE--RLLVYEFMPNKSLDSSFSGTFKDLLCLH 122
+E +E L+ L +L ++ C +E + LVY+ + + L +H
Sbjct: 94 IEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQLL-------------RGLKYIH 140
Query: 123 KYSRLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYT 182
+IHRDLK SN+ +++ +I DFG+AR ++ V T Y + E
Sbjct: 141 SAG---IIHRDLKPSNVAVNEDCELRILDFGLAR-----QADEEMTGYVATRWYRAPEIM 192
Query: 183 MSGTVSIKT-DVFGFGVLVLKIVCGK 207
++ +T D++ G ++ +++ GK
Sbjct: 193 LNWMHYNQTVDIWSVGCIMAELLQGK 218
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 43/80 (53%), Gaps = 6/80 (7%)
Query: 129 VIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGT-V 187
+IHRDLK SN+ +++ KI DFG+AR +G V T Y + E ++
Sbjct: 175 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTG-----YVATRWYRAPEIMLNWMHY 229
Query: 188 SIKTDVFGFGVLVLKIVCGK 207
++ D++ G ++ +++ G+
Sbjct: 230 NMTVDIWSVGCIMAELLTGR 249
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 43/80 (53%), Gaps = 6/80 (7%)
Query: 129 VIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVS 188
+IHRDLK SN+ +++ KI DFG+AR +G V T Y + E ++
Sbjct: 146 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTG-----YVATRWYRAPEIMLNAMHY 200
Query: 189 IKT-DVFGFGVLVLKIVCGK 207
+T D++ G ++ +++ G+
Sbjct: 201 NQTVDIWSVGCIMAELLTGR 220
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 47/86 (54%), Gaps = 5/86 (5%)
Query: 122 HKYSRLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGY---MS 178
H +S+L VIHRD+K SN+L++ K DFG++ + V++ + + Y ++
Sbjct: 151 HLHSKLSVIHRDVKPSNVLINALGQVKXCDFGISG-YLVDDVAKDIDAGCKPYXAPERIN 209
Query: 179 LEYTMSGTVSIKTDVFGFGVLVLKIV 204
E G S+K+D++ G+ +++
Sbjct: 210 PELNQKG-YSVKSDIWSLGITXIELA 234
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 76/177 (42%), Gaps = 32/177 (18%)
Query: 59 TSGQGRVEFQNEAKLIAKLQYTNLVKLLG-------------CSIHGEERLLVYEFMPNK 105
TS R +F EA + + + ++VKL+G C++ GE R + +
Sbjct: 78 TSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVWIIMELCTL-GELRSFLQVRKYSL 136
Query: 106 SLDSSFSGTFKDLLCLHKYSRLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGA 165
L S ++ L R +HRD+ A N+L+ K+ DFG++R
Sbjct: 137 DLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM------E 190
Query: 166 NTNRIVGTYGYMSLEYTMSGTVSIK-----TDVFGFGVLVLKIVC-------GKKNN 210
++ + G + +++ +++ + +DV+ FGV + +I+ G KNN
Sbjct: 191 DSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN 247
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 76/177 (42%), Gaps = 32/177 (18%)
Query: 59 TSGQGRVEFQNEAKLIAKLQYTNLVKLLG-------------CSIHGEERLLVYEFMPNK 105
TS R +F EA + + + ++VKL+G C++ GE R + +
Sbjct: 53 TSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVWIIMELCTL-GELRSFLQVRKYSL 111
Query: 106 SLDSSFSGTFKDLLCLHKYSRLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGA 165
L S ++ L R +HRD+ A N+L+ K+ DFG++R
Sbjct: 112 DLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM------E 165
Query: 166 NTNRIVGTYGYMSLEYTMSGTVSIK-----TDVFGFGVLVLKIVC-------GKKNN 210
++ + G + +++ +++ + +DV+ FGV + +I+ G KNN
Sbjct: 166 DSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN 222
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 76/177 (42%), Gaps = 32/177 (18%)
Query: 59 TSGQGRVEFQNEAKLIAKLQYTNLVKLLG-------------CSIHGEERLLVYEFMPNK 105
TS R +F EA + + + ++VKL+G C++ GE R + +
Sbjct: 55 TSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVWIIMELCTL-GELRSFLQVRKYSL 113
Query: 106 SLDSSFSGTFKDLLCLHKYSRLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGA 165
L S ++ L R +HRD+ A N+L+ K+ DFG++R
Sbjct: 114 DLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM------E 167
Query: 166 NTNRIVGTYGYMSLEYTMSGTVSIK-----TDVFGFGVLVLKIVC-------GKKNN 210
++ + G + +++ +++ + +DV+ FGV + +I+ G KNN
Sbjct: 168 DSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN 224
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 55/127 (43%), Gaps = 16/127 (12%)
Query: 70 EAKLIAKLQYTNLVKLLGC-----------SIHGEERLLVYEFMPNKSLDSSFSG-TFKD 117
E +++++++ N++K+L HG L + LD + F+
Sbjct: 79 EIAILSRVEHANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQ 138
Query: 118 LLCLHKYSRLR-VIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGY 176
L+ Y RL+ +IHRD+K NI++ + K+ DFG A E G GT Y
Sbjct: 139 LVSAVGYLRLKDIIHRDIKDENIVIAEDFTIKLIDFGSAAYL---ERGKLFYTFCGTIEY 195
Query: 177 MSLEYTM 183
+ E M
Sbjct: 196 CAPEVLM 202
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 43/80 (53%), Gaps = 6/80 (7%)
Query: 129 VIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVS 188
+IHRDLK SN+ +++ KI DFG+AR +G V T Y + E ++
Sbjct: 153 IIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTG-----YVATRWYRAPEIMLNWMHY 207
Query: 189 IKT-DVFGFGVLVLKIVCGK 207
+T D++ G ++ +++ G+
Sbjct: 208 NQTVDIWSVGCIMAELLTGR 227
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 43/80 (53%), Gaps = 6/80 (7%)
Query: 129 VIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVS 188
+IHRDLK SN+ +++ KI DFG+AR +G V T Y + E ++
Sbjct: 153 IIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTG-----YVATRWYRAPEIMLNWMHY 207
Query: 189 IKT-DVFGFGVLVLKIVCGK 207
+T D++ G ++ +++ G+
Sbjct: 208 NQTVDIWSVGCIMAELLTGR 227
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 43/80 (53%), Gaps = 6/80 (7%)
Query: 129 VIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVS 188
+IHRDLK SN+ +++ KI DFG+AR +G V T Y + E ++
Sbjct: 153 IIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTG-----YVATRWYRAPEIMLNWMHY 207
Query: 189 IKT-DVFGFGVLVLKIVCGK 207
+T D++ G ++ +++ G+
Sbjct: 208 NQTVDIWSVGCIMAELLTGR 227
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 76/165 (46%), Gaps = 25/165 (15%)
Query: 61 GQGRVEFQNEAKLIAKLQYTNLVKL------------LGCSIHGEERLLVYEFMPNK-SL 107
G R + + E ++ ++Q+ N++ L +G + G E +++F+ K SL
Sbjct: 55 GVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILIGELVAGGE---LFDFLAEKESL 111
Query: 108 DSSFSGTF-KDLL-CLHKYSRLRVIHRDLKASNILLDD----QLNTKISDFGMARIFGVN 161
+ F K +L ++ L++ H DLK NI+L D + KI DFG+A
Sbjct: 112 TEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI--- 168
Query: 162 ESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKIVCG 206
+ G I GT +++ E + ++ D++ GV+ ++ G
Sbjct: 169 DFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 75/162 (46%), Gaps = 19/162 (11%)
Query: 61 GQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLV---------YEFMPNK-SLDSS 110
G R + + E ++ ++Q+ N++ L + + +L+ ++F+ K SL
Sbjct: 55 GVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEE 114
Query: 111 FSGTF-KDLL-CLHKYSRLRVIHRDLKASNILLDD----QLNTKISDFGMARIFGVNESG 164
+ F K +L ++ L++ H DLK NI+L D + KI DFG+A + G
Sbjct: 115 EATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI---DFG 171
Query: 165 ANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKIVCG 206
I GT +++ E + ++ D++ GV+ ++ G
Sbjct: 172 NEFKNIFGTPAFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 67/146 (45%), Gaps = 24/146 (16%)
Query: 65 VEFQNEAKLIAKLQYTNLVKLLGCSIHGEE--RLLVYEFMPNKSLDSSFSGTFKDLLCLH 122
+E +E L+ L +L ++ C +E + LVY+ + + L +H
Sbjct: 102 IEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQLL-------------RGLKYIH 148
Query: 123 KYSRLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYT 182
+IHRDLK SN+ +++ +I DFG+AR ++ V T Y + E
Sbjct: 149 SAG---IIHRDLKPSNVAVNEDSELRILDFGLAR-----QADEEMTGYVATRWYRAPEIM 200
Query: 183 MSGTVSIKT-DVFGFGVLVLKIVCGK 207
++ +T D++ G ++ +++ GK
Sbjct: 201 LNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 75/162 (46%), Gaps = 19/162 (11%)
Query: 61 GQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLV---------YEFMPNK-SLDSS 110
G R + + E ++ ++Q+ N++ L + + +L+ ++F+ K SL
Sbjct: 54 GVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEE 113
Query: 111 FSGTF-KDLL-CLHKYSRLRVIHRDLKASNILLDD----QLNTKISDFGMARIFGVNESG 164
+ F K +L ++ L++ H DLK NI+L D + KI DFG+A + G
Sbjct: 114 EATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI---DFG 170
Query: 165 ANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKIVCG 206
I GT +++ E + ++ D++ GV+ ++ G
Sbjct: 171 NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 212
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 75/162 (46%), Gaps = 19/162 (11%)
Query: 61 GQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLV---------YEFMPNK-SLDSS 110
G R + + E ++ ++Q+ N++ L + + +L+ ++F+ K SL
Sbjct: 54 GVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEE 113
Query: 111 FSGTF-KDLL-CLHKYSRLRVIHRDLKASNILLDD----QLNTKISDFGMARIFGVNESG 164
+ F K +L ++ L++ H DLK NI+L D + KI DFG+A + G
Sbjct: 114 EATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI---DFG 170
Query: 165 ANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKIVCG 206
I GT +++ E + ++ D++ GV+ ++ G
Sbjct: 171 NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 212
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 55/115 (47%), Gaps = 19/115 (16%)
Query: 129 VIHRDLKASNILL----DDQLNTKISDFGMARIFGVN-ESGANTNRIVGTYGYMSLEYTM 183
V+HRDLK +NIL+ ++ KI+D G AR+F + A+ + +V T+ Y + E +
Sbjct: 149 VLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLL 208
Query: 184 SGTVSIKT-DVFGFGVLVLKIVCGK----------KNNKSYHT---ERPLNLVGI 224
K D++ G + +++ + K + YH +R N++G
Sbjct: 209 GARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGF 263
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 75/162 (46%), Gaps = 19/162 (11%)
Query: 61 GQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLV---------YEFMPNK-SLDSS 110
G R + + E ++ ++Q+ N++ L + + +L+ ++F+ K SL
Sbjct: 55 GVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEE 114
Query: 111 FSGTF-KDLL-CLHKYSRLRVIHRDLKASNILLDD----QLNTKISDFGMARIFGVNESG 164
+ F K +L ++ L++ H DLK NI+L D + KI DFG+A + G
Sbjct: 115 EATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI---DFG 171
Query: 165 ANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKIVCG 206
I GT +++ E + ++ D++ GV+ ++ G
Sbjct: 172 NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 43/80 (53%), Gaps = 6/80 (7%)
Query: 129 VIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVS 188
+IHRDLK SN+ +++ KI DFG+AR +G V T Y + E ++
Sbjct: 146 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAG-----FVATRWYRAPEIMLNWMHY 200
Query: 189 IKT-DVFGFGVLVLKIVCGK 207
+T D++ G ++ +++ G+
Sbjct: 201 NQTVDIWSVGCIMAELLTGR 220
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 45/87 (51%), Gaps = 5/87 (5%)
Query: 124 YSRLRVIHRDLKASNILL-DDQLNTKISDFGMARIF---GVNESGANTNRIVGTYGYMSL 179
+SR R++H D+KA N+LL D + + DFG A G+ + + I GT +M+
Sbjct: 183 HSR-RILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDYIPGTETHMAP 241
Query: 180 EYTMSGTVSIKTDVFGFGVLVLKIVCG 206
E + + K DV+ ++L ++ G
Sbjct: 242 EVVLGRSCDAKVDVWSSCCMMLHMLNG 268
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 50/115 (43%), Gaps = 26/115 (22%)
Query: 129 VIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYM---------SL 179
++HRDLK +N L++ + K+ DFG+AR E+G + I M +L
Sbjct: 177 ILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPREDDMNLVTFPHTKNL 236
Query: 180 EYTMSGTVSIK-----------------TDVFGFGVLVLKIVCGKKNNKSYHTER 217
+ ++G V + DV+ G + +++ K N +YH +R
Sbjct: 237 KRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIKENVAYHADR 291
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 43/80 (53%), Gaps = 6/80 (7%)
Query: 129 VIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVS 188
+IHRDLK SN+ +++ KI DFG+AR +G V T Y + E ++
Sbjct: 146 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAG-----FVATRWYRAPEIMLNWMHY 200
Query: 189 IKT-DVFGFGVLVLKIVCGK 207
+T D++ G ++ +++ G+
Sbjct: 201 NQTVDIWSVGCIMAELLTGR 220
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 75/162 (46%), Gaps = 19/162 (11%)
Query: 61 GQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLV---------YEFMPNK-SLDSS 110
G R + + E ++ ++Q+ N++ L + + +L+ ++F+ K SL
Sbjct: 55 GVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEE 114
Query: 111 FSGTF-KDLL-CLHKYSRLRVIHRDLKASNILLDD----QLNTKISDFGMARIFGVNESG 164
+ F K +L ++ L++ H DLK NI+L D + KI DFG+A + G
Sbjct: 115 EATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI---DFG 171
Query: 165 ANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKIVCG 206
I GT +++ E + ++ D++ GV+ ++ G
Sbjct: 172 NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 75/162 (46%), Gaps = 19/162 (11%)
Query: 61 GQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLV---------YEFMPNK-SLDSS 110
G R + + E ++ ++Q+ N++ L + + +L+ ++F+ K SL
Sbjct: 55 GVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEE 114
Query: 111 FSGTF-KDLL-CLHKYSRLRVIHRDLKASNILLDD----QLNTKISDFGMARIFGVNESG 164
+ F K +L ++ L++ H DLK NI+L D + KI DFG+A + G
Sbjct: 115 EATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI---DFG 171
Query: 165 ANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKIVCG 206
I GT +++ E + ++ D++ GV+ ++ G
Sbjct: 172 NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 43/80 (53%), Gaps = 6/80 (7%)
Query: 129 VIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVS 188
+IHRDLK SN+ +++ KI DFG+AR +G V T Y + E ++
Sbjct: 151 IIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTG-----YVATRWYRAPEIMLNWMHY 205
Query: 189 IKT-DVFGFGVLVLKIVCGK 207
+T D++ G ++ +++ G+
Sbjct: 206 NQTVDIWSVGCIMAELLTGR 225
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 43/80 (53%), Gaps = 6/80 (7%)
Query: 129 VIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVS 188
+IHRDLK SN+ +++ KI DFG+AR +G V T Y + E ++
Sbjct: 151 IIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTG-----YVATRWYRAPEIMLNWMHY 205
Query: 189 IKT-DVFGFGVLVLKIVCGK 207
+T D++ G ++ +++ G+
Sbjct: 206 NQTVDIWSVGCIMAELLTGR 225
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 76/177 (42%), Gaps = 32/177 (18%)
Query: 59 TSGQGRVEFQNEAKLIAKLQYTNLVKLLG-------------CSIHGEERLLVYEFMPNK 105
TS R +F EA + + + ++VKL+G C++ GE R + +
Sbjct: 430 TSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVWIIMELCTL-GELRSFLQVRKFSL 488
Query: 106 SLDSSFSGTFKDLLCLHKYSRLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGA 165
L S ++ L R +HRD+ A N+L+ K+ DFG++R
Sbjct: 489 DLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM------E 542
Query: 166 NTNRIVGTYGYMSLEYTMSGTVSIK-----TDVFGFGVLVLKIVC-------GKKNN 210
++ + G + +++ +++ + +DV+ FGV + +I+ G KNN
Sbjct: 543 DSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN 599
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 76/177 (42%), Gaps = 32/177 (18%)
Query: 59 TSGQGRVEFQNEAKLIAKLQYTNLVKLLG-------------CSIHGEERLLVYEFMPNK 105
TS R +F EA + + + ++VKL+G C++ GE R + +
Sbjct: 50 TSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVWIIMELCTL-GELRSFLQVRKFSL 108
Query: 106 SLDSSFSGTFKDLLCLHKYSRLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGA 165
L S ++ L R +HRD+ A N+L+ K+ DFG++R
Sbjct: 109 DLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSATDCVKLGDFGLSRYM------E 162
Query: 166 NTNRIVGTYGYMSLEYTMSGTVSIK-----TDVFGFGVLVLKIVC-------GKKNN 210
++ + G + +++ +++ + +DV+ FGV + +I+ G KNN
Sbjct: 163 DSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN 219
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 43/80 (53%), Gaps = 6/80 (7%)
Query: 129 VIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVS 188
+IHRDLK SN+ +++ KI DFG+AR +G V T Y + E ++
Sbjct: 142 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAG-----FVATRWYRAPEIMLNWMHY 196
Query: 189 IKT-DVFGFGVLVLKIVCGK 207
+T D++ G ++ +++ G+
Sbjct: 197 NQTVDIWSVGCIMAELLTGR 216
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 43/80 (53%), Gaps = 6/80 (7%)
Query: 129 VIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVS 188
+IHRDLK SN+ +++ KI DFG+AR +G V T Y + E ++
Sbjct: 146 IIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTG-----YVATRWYRAPEIMLNWMHY 200
Query: 189 IKT-DVFGFGVLVLKIVCGK 207
+T D++ G ++ +++ G+
Sbjct: 201 NQTVDIWSVGCIMAELLTGR 220
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 43/80 (53%), Gaps = 6/80 (7%)
Query: 129 VIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVS 188
+IHRDLK SN+ +++ KI DFG+AR +G V T Y + E ++
Sbjct: 152 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTG-----YVATRWYRAPEIMLNWMHY 206
Query: 189 IKT-DVFGFGVLVLKIVCGK 207
+T D++ G ++ +++ G+
Sbjct: 207 NQTVDIWSVGCIMAELLTGR 226
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 43/85 (50%), Gaps = 10/85 (11%)
Query: 129 VIHRDLKASNILLDDQLNTKISDFGMARIF--GVNESGANTNRIVGTYGYMSLEYTMSGT 186
+ HRDLK+ NIL+ I+D G+A + N+ N VGT YM+ E + T
Sbjct: 134 IAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPE-VLDET 192
Query: 187 VSI-------KTDVFGFGVLVLKIV 204
+ + + D++ FG+++ ++
Sbjct: 193 IQVDCFDSYKRVDIWAFGLVLWEVA 217
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 43/80 (53%), Gaps = 6/80 (7%)
Query: 129 VIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVS 188
+IHRDLK SN+ +++ KI DFG+AR +G V T Y + E ++
Sbjct: 152 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTG-----YVATRWYRAPEIMLNWMHY 206
Query: 189 IKT-DVFGFGVLVLKIVCGK 207
+T D++ G ++ +++ G+
Sbjct: 207 NQTVDIWSVGCIMAELLTGR 226
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 43/85 (50%), Gaps = 10/85 (11%)
Query: 129 VIHRDLKASNILLDDQLNTKISDFGMARIF--GVNESGANTNRIVGTYGYMSLEYTMSGT 186
+ HRDLK+ NIL+ I+D G+A + N+ N VGT YM+ E + T
Sbjct: 134 IAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPE-VLDET 192
Query: 187 VSI-------KTDVFGFGVLVLKIV 204
+ + + D++ FG+++ ++
Sbjct: 193 IQVDCFDSYKRVDIWAFGLVLWEVA 217
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 43/80 (53%), Gaps = 6/80 (7%)
Query: 129 VIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVS 188
+IHRDLK SN+ +++ KI DFG+AR +G V T Y + E ++
Sbjct: 146 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGX-----VATRWYRAPEIMLNWMHY 200
Query: 189 IKT-DVFGFGVLVLKIVCGK 207
+T D++ G ++ +++ G+
Sbjct: 201 NQTVDIWSVGCIMAELLTGR 220
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 43/80 (53%), Gaps = 6/80 (7%)
Query: 129 VIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVS 188
+IHRDLK SN+ +++ KI DFG+AR +G V T Y + E ++
Sbjct: 146 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTG-----YVATRWYRAPEIMLNWMHY 200
Query: 189 IKT-DVFGFGVLVLKIVCGK 207
+T D++ G ++ +++ G+
Sbjct: 201 NQTVDIWSVGCIMAELLTGR 220
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 43/80 (53%), Gaps = 6/80 (7%)
Query: 129 VIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVS 188
+IHRDLK SN+ +++ KI DFG+AR +G V T Y + E ++
Sbjct: 157 IIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTG-----YVATRWYRAPEIMLNWMHY 211
Query: 189 IKT-DVFGFGVLVLKIVCGK 207
+T D++ G ++ +++ G+
Sbjct: 212 NQTVDIWSVGCIMAELLTGR 231
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 75/162 (46%), Gaps = 19/162 (11%)
Query: 61 GQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLV---------YEFMPNK-SLDSS 110
G R + + E ++ ++Q+ N++ L + + +L+ ++F+ K SL
Sbjct: 55 GVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEE 114
Query: 111 FSGTF-KDLL-CLHKYSRLRVIHRDLKASNILLDD----QLNTKISDFGMARIFGVNESG 164
+ F K +L ++ L++ H DLK NI+L D + KI DFG+A + G
Sbjct: 115 EATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI---DFG 171
Query: 165 ANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKIVCG 206
I GT +++ E + ++ D++ GV+ ++ G
Sbjct: 172 NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 43/80 (53%), Gaps = 6/80 (7%)
Query: 129 VIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVS 188
+IHRDLK SN+ +++ KI DFG+AR +G V T Y + E ++
Sbjct: 146 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTG-----YVATRWYRAPEIMLNWMHY 200
Query: 189 IKT-DVFGFGVLVLKIVCGK 207
+T D++ G ++ +++ G+
Sbjct: 201 NQTVDIWSVGCIMAELLTGR 220
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 43/80 (53%), Gaps = 6/80 (7%)
Query: 129 VIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVS 188
+IHRDLK SN+ +++ KI DFG+AR +G V T Y + E ++
Sbjct: 156 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTG-----YVATRWYRAPEIMLNWMHY 210
Query: 189 IKT-DVFGFGVLVLKIVCGK 207
+T D++ G ++ +++ G+
Sbjct: 211 NQTVDIWSVGCIMAELLTGR 230
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 75/162 (46%), Gaps = 19/162 (11%)
Query: 61 GQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLV---------YEFMPNK-SLDSS 110
G R + + E ++ ++Q+ N++ L + + +L+ ++F+ K SL
Sbjct: 55 GVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEE 114
Query: 111 FSGTF-KDLL-CLHKYSRLRVIHRDLKASNILLDD----QLNTKISDFGMARIFGVNESG 164
+ F K +L ++ L++ H DLK NI+L D + KI DFG+A + G
Sbjct: 115 EATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI---DFG 171
Query: 165 ANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKIVCG 206
I GT +++ E + ++ D++ GV+ ++ G
Sbjct: 172 NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 43/80 (53%), Gaps = 6/80 (7%)
Query: 129 VIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVS 188
+IHRDLK SN+ +++ KI DFG+AR +G V T Y + E ++
Sbjct: 146 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTG-----YVATRWYRAPEIMLNWMHY 200
Query: 189 IKT-DVFGFGVLVLKIVCGK 207
+T D++ G ++ +++ G+
Sbjct: 201 NQTVDIWSVGCIMAELLTGR 220
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 43/80 (53%), Gaps = 6/80 (7%)
Query: 129 VIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVS 188
+IHRDLK SN+ +++ KI DFG+AR +G V T Y + E ++
Sbjct: 153 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTG-----YVATRWYRAPEIMLNWMHY 207
Query: 189 IKT-DVFGFGVLVLKIVCGK 207
+T D++ G ++ +++ G+
Sbjct: 208 NQTVDIWSVGCIMAELLTGR 227
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 43/80 (53%), Gaps = 6/80 (7%)
Query: 129 VIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVS 188
+IHRDLK SN+ +++ KI DFG+AR +G V T Y + E ++
Sbjct: 151 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTG-----YVATRWYRAPEIMLNWMHY 205
Query: 189 IKT-DVFGFGVLVLKIVCGK 207
+T D++ G ++ +++ G+
Sbjct: 206 NQTVDIWSVGCIMAELLTGR 225
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 43/80 (53%), Gaps = 6/80 (7%)
Query: 129 VIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVS 188
+IHRDLK SN+ +++ KI DFG+AR +G V T Y + E ++
Sbjct: 145 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTG-----YVATRWYRAPEIMLNWMHY 199
Query: 189 IKT-DVFGFGVLVLKIVCGK 207
+T D++ G ++ +++ G+
Sbjct: 200 NQTVDIWSVGCIMAELLTGR 219
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 43/80 (53%), Gaps = 6/80 (7%)
Query: 129 VIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVS 188
+IHRDLK SN+ +++ KI DFG+AR +G V T Y + E ++
Sbjct: 148 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTG-----YVATRWYRAPEIMLNWMHY 202
Query: 189 IKT-DVFGFGVLVLKIVCGK 207
+T D++ G ++ +++ G+
Sbjct: 203 NQTVDIWSVGCIMAELLTGR 222
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 43/80 (53%), Gaps = 6/80 (7%)
Query: 129 VIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVS 188
+IHRDLK SN+ +++ KI DFG+AR +G V T Y + E ++
Sbjct: 146 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTG-----YVATRWYRAPEIMLNWMHY 200
Query: 189 IKT-DVFGFGVLVLKIVCGK 207
+T D++ G ++ +++ G+
Sbjct: 201 NQTVDIWSVGCIMAELLTGR 220
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 43/80 (53%), Gaps = 6/80 (7%)
Query: 129 VIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVS 188
+IHRDLK SN+ +++ KI DFG+AR +G V T Y + E ++
Sbjct: 152 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTG-----YVATRWYRAPEIMLNWMHY 206
Query: 189 IKT-DVFGFGVLVLKIVCGK 207
+T D++ G ++ +++ G+
Sbjct: 207 NQTVDIWSVGCIMAELLTGR 226
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 43/80 (53%), Gaps = 6/80 (7%)
Query: 129 VIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVS 188
+IHRDLK SN+ +++ +I DFG+AR ++ V T Y + E ++
Sbjct: 152 IIHRDLKPSNVAVNEDSELRILDFGLAR-----QADEEMTGYVATRWYRAPEIMLNWMHY 206
Query: 189 IKT-DVFGFGVLVLKIVCGK 207
+T D++ G ++ +++ GK
Sbjct: 207 NQTVDIWSVGCIMAELLQGK 226
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 43/80 (53%), Gaps = 6/80 (7%)
Query: 129 VIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVS 188
+IHRDLK SN+ +++ KI DFG+AR +G V T Y + E ++
Sbjct: 146 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTG-----YVATRWYRAPEIMLNWMHY 200
Query: 189 IKT-DVFGFGVLVLKIVCGK 207
+T D++ G ++ +++ G+
Sbjct: 201 NQTVDIWSVGCIMAELLTGR 220
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 75/162 (46%), Gaps = 19/162 (11%)
Query: 61 GQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLV---------YEFMPNK-SLDSS 110
G R + + E ++ ++Q+ N++ L + + +L+ ++F+ K SL
Sbjct: 55 GVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEE 114
Query: 111 FSGTF-KDLL-CLHKYSRLRVIHRDLKASNILLDD----QLNTKISDFGMARIFGVNESG 164
+ F K +L ++ L++ H DLK NI+L D + KI DFG+A + G
Sbjct: 115 EATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI---DFG 171
Query: 165 ANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKIVCG 206
I GT +++ E + ++ D++ GV+ ++ G
Sbjct: 172 NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 43/80 (53%), Gaps = 6/80 (7%)
Query: 129 VIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVS 188
+IHRDLK SN+ +++ KI DFG+AR +G V T Y + E ++
Sbjct: 148 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTG-----YVATRWYRAPEIMLNWMHY 202
Query: 189 IKT-DVFGFGVLVLKIVCGK 207
+T D++ G ++ +++ G+
Sbjct: 203 NQTVDIWSVGCIMAELLTGR 222
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 43/80 (53%), Gaps = 6/80 (7%)
Query: 129 VIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVS 188
+IHRDLK SN+ +++ KI DFG+AR +G V T Y + E ++
Sbjct: 146 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTG-----YVATRWYRAPEIMLNWMHY 200
Query: 189 IKT-DVFGFGVLVLKIVCGK 207
+T D++ G ++ +++ G+
Sbjct: 201 NQTVDIWSVGCIMAELLTGR 220
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 43/80 (53%), Gaps = 6/80 (7%)
Query: 129 VIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVS 188
+IHRDLK SN+ +++ KI DFG+AR +G V T Y + E ++
Sbjct: 148 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTG-----YVATRWYRAPEIMLNWMHY 202
Query: 189 IKT-DVFGFGVLVLKIVCGK 207
+T D++ G ++ +++ G+
Sbjct: 203 NQTVDIWSVGCIMAELLTGR 222
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 75/162 (46%), Gaps = 19/162 (11%)
Query: 61 GQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLV---------YEFMPNK-SLDSS 110
G R + + E ++ ++Q+ N++ L + + +L+ ++F+ K SL
Sbjct: 55 GVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEE 114
Query: 111 FSGTF-KDLL-CLHKYSRLRVIHRDLKASNILLDD----QLNTKISDFGMARIFGVNESG 164
+ F K +L ++ L++ H DLK NI+L D + KI DFG+A + G
Sbjct: 115 EATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI---DFG 171
Query: 165 ANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKIVCG 206
I GT +++ E + ++ D++ GV+ ++ G
Sbjct: 172 NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 43/80 (53%), Gaps = 6/80 (7%)
Query: 129 VIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVS 188
+IHRDLK SN+ +++ KI DFG+AR +G V T Y + E ++
Sbjct: 146 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTG-----YVATRWYRAPEIMLNWMHY 200
Query: 189 IKT-DVFGFGVLVLKIVCGK 207
+T D++ G ++ +++ G+
Sbjct: 201 NQTVDIWSVGCIMAELLTGR 220
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 43/80 (53%), Gaps = 6/80 (7%)
Query: 129 VIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVS 188
+IHRDLK SN+ +++ KI DFG+AR +G V T Y + E ++
Sbjct: 146 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTG-----YVATRWYRAPEIMLNWMHY 200
Query: 189 IKT-DVFGFGVLVLKIVCGK 207
+T D++ G ++ +++ G+
Sbjct: 201 NQTVDIWSVGCIMAELLTGR 220
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 43/80 (53%), Gaps = 6/80 (7%)
Query: 129 VIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVS 188
+IHRDLK SN+ +++ KI DFG+AR +G V T Y + E ++
Sbjct: 151 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTG-----YVATRWYRAPEIMLNWMHY 205
Query: 189 IKT-DVFGFGVLVLKIVCGK 207
+T D++ G ++ +++ G+
Sbjct: 206 NQTVDIWSVGCIMAELLTGR 225
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 43/80 (53%), Gaps = 6/80 (7%)
Query: 129 VIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVS 188
+IHRDLK SN+ +++ KI DFG+AR +G V T Y + E ++
Sbjct: 146 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTG-----YVATRWYRAPEIMLNWMHY 200
Query: 189 IKT-DVFGFGVLVLKIVCGK 207
+T D++ G ++ +++ G+
Sbjct: 201 NQTVDIWSVGCIMAELLTGR 220
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 43/80 (53%), Gaps = 6/80 (7%)
Query: 129 VIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVS 188
+IHRDLK SN+ +++ KI DFG+AR +G V T Y + E ++
Sbjct: 157 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTG-----YVATRWYRAPEIMLNWMHY 211
Query: 189 IKT-DVFGFGVLVLKIVCGK 207
+T D++ G ++ +++ G+
Sbjct: 212 NQTVDIWSVGCIMAELLTGR 231
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 43/80 (53%), Gaps = 6/80 (7%)
Query: 129 VIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVS 188
+IHRDLK SN+ +++ KI DFG+AR +G V T Y + E ++
Sbjct: 143 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTG-----YVATRWYRAPEIMLNWMHY 197
Query: 189 IKT-DVFGFGVLVLKIVCGK 207
+T D++ G ++ +++ G+
Sbjct: 198 NQTVDIWSVGCIMAELLTGR 217
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 43/80 (53%), Gaps = 6/80 (7%)
Query: 129 VIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVS 188
+IHRDLK SN+ +++ KI DFG+AR +G V T Y + E ++
Sbjct: 142 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTG-----YVATRWYRAPEIMLNWMHY 196
Query: 189 IKT-DVFGFGVLVLKIVCGK 207
+T D++ G ++ +++ G+
Sbjct: 197 NQTVDIWSVGCIMAELLTGR 216
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 43/80 (53%), Gaps = 6/80 (7%)
Query: 129 VIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVS 188
+IHRDLK SN+ +++ KI DFG+AR +G V T Y + E ++
Sbjct: 143 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTG-----YVATRWYRAPEIMLNWMHY 197
Query: 189 IKT-DVFGFGVLVLKIVCGK 207
+T D++ G ++ +++ G+
Sbjct: 198 NQTVDIWSVGCIMAELLTGR 217
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 43/80 (53%), Gaps = 6/80 (7%)
Query: 129 VIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVS 188
+IHRDLK SN+ +++ KI DFG+AR +G V T Y + E ++
Sbjct: 165 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTG-----YVATRWYRAPEIMLNWMHY 219
Query: 189 IKT-DVFGFGVLVLKIVCGK 207
+T D++ G ++ +++ G+
Sbjct: 220 NQTVDIWSVGCIMAELLTGR 239
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 43/80 (53%), Gaps = 6/80 (7%)
Query: 129 VIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVS 188
+IHRDLK SN+ +++ KI DFG+AR +G V T Y + E ++
Sbjct: 166 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTG-----YVATRWYRAPEIMLNWMHY 220
Query: 189 IKT-DVFGFGVLVLKIVCGK 207
+T D++ G ++ +++ G+
Sbjct: 221 NQTVDIWSVGCIMAELLTGR 240
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 43/80 (53%), Gaps = 6/80 (7%)
Query: 129 VIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVS 188
+IHRDLK SN+ +++ KI DFG+AR +G V T Y + E ++
Sbjct: 169 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTG-----YVATRWYRAPEIMLNWMHY 223
Query: 189 IKT-DVFGFGVLVLKIVCGK 207
+T D++ G ++ +++ G+
Sbjct: 224 NQTVDIWSVGCIMAELLTGR 243
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 40/78 (51%), Gaps = 4/78 (5%)
Query: 131 HRDLKASNILLDDQLNTKISDFGM-ARIFGVNESGANTNRIVGTYGYMSLEYTMSGT-VS 188
HRDLK N+L D+ K+ DFG+ A+ G + T G+ Y + E + +
Sbjct: 131 HRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQT--CCGSLAYAAPELIQGKSYLG 188
Query: 189 IKTDVFGFGVLVLKIVCG 206
+ DV+ G+L+ ++CG
Sbjct: 189 SEADVWSMGILLYVLMCG 206
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 43/80 (53%), Gaps = 6/80 (7%)
Query: 129 VIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVS 188
+IHRDLK SN+ +++ KI DFG+AR +G V T Y + E ++
Sbjct: 142 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTG-----YVATRWYRAPEIMLNWMHY 196
Query: 189 IKT-DVFGFGVLVLKIVCGK 207
+T D++ G ++ +++ G+
Sbjct: 197 NQTVDIWSVGCIMAELLTGR 216
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 43/80 (53%), Gaps = 6/80 (7%)
Query: 129 VIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVS 188
+IHRDLK SN+ +++ KI DFG+AR +G V T Y + E ++
Sbjct: 158 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTG-----YVATRWYRAPEIMLNWMHY 212
Query: 189 IKT-DVFGFGVLVLKIVCGK 207
+T D++ G ++ +++ G+
Sbjct: 213 NQTVDIWSVGCIMAELLTGR 232
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 43/80 (53%), Gaps = 6/80 (7%)
Query: 129 VIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVS 188
+IHRDLK SN+ +++ KI DFG+AR +G V T Y + E ++
Sbjct: 158 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTG-----YVATRWYRAPEIMLNWMHY 212
Query: 189 IKT-DVFGFGVLVLKIVCGK 207
+T D++ G ++ +++ G+
Sbjct: 213 NQTVDIWSVGCIMAELLTGR 232
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 43/80 (53%), Gaps = 6/80 (7%)
Query: 129 VIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVS 188
+IHRDLK SN+ +++ KI DFG+AR +G V T Y + E ++
Sbjct: 166 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTG-----YVATRWYRAPEIMLNWMHY 220
Query: 189 IKT-DVFGFGVLVLKIVCGK 207
+T D++ G ++ +++ G+
Sbjct: 221 NQTVDIWSVGCIMAELLTGR 240
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 43/80 (53%), Gaps = 6/80 (7%)
Query: 129 VIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVS 188
+IHRDLK SN+ +++ KI DFG+AR +G V T Y + E ++
Sbjct: 158 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTG-----YVATRWYRAPEIMLNWMHY 212
Query: 189 IKT-DVFGFGVLVLKIVCGK 207
+T D++ G ++ +++ G+
Sbjct: 213 NQTVDIWSVGCIMAELLTGR 232
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 43/80 (53%), Gaps = 6/80 (7%)
Query: 129 VIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVS 188
+IHRDLK SN+ +++ KI DFG+AR +G V T Y + E ++
Sbjct: 165 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTG-----YVATRWYRAPEIMLNWMHY 219
Query: 189 IKT-DVFGFGVLVLKIVCGK 207
+T D++ G ++ +++ G+
Sbjct: 220 NQTVDIWSVGCIMAELLTGR 239
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 75/162 (46%), Gaps = 19/162 (11%)
Query: 61 GQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLV---------YEFMPNK-SLDSS 110
G R + + E ++ ++Q+ N++ L + + +L+ ++F+ K SL
Sbjct: 55 GVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEE 114
Query: 111 FSGTF-KDLL-CLHKYSRLRVIHRDLKASNILLDD----QLNTKISDFGMARIFGVNESG 164
+ F K +L ++ L++ H DLK NI+L D + KI DFG+A + G
Sbjct: 115 EATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI---DFG 171
Query: 165 ANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKIVCG 206
I GT +++ E + ++ D++ GV+ ++ G
Sbjct: 172 NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 43/80 (53%), Gaps = 6/80 (7%)
Query: 129 VIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVS 188
+IHRDLK SN+ +++ KI DFG+AR +G V T Y + E ++
Sbjct: 142 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTG-----YVATRWYRAPEIMLNWMHY 196
Query: 189 IKT-DVFGFGVLVLKIVCGK 207
+T D++ G ++ +++ G+
Sbjct: 197 NQTVDIWSVGCIMAELLTGR 216
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 76/177 (42%), Gaps = 32/177 (18%)
Query: 59 TSGQGRVEFQNEAKLIAKLQYTNLVKLLG-------------CSIHGEERLLVYEFMPNK 105
TS R +F EA + + + ++VKL+G C++ GE R + +
Sbjct: 430 TSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVWIIMELCTL-GELRSFLQVRKFSL 488
Query: 106 SLDSSFSGTFKDLLCLHKYSRLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGA 165
L S ++ L R +HRD+ A N+L+ K+ DFG++R
Sbjct: 489 DLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSATDCVKLGDFGLSRYM------E 542
Query: 166 NTNRIVGTYGYMSLEYTMSGTVSIK-----TDVFGFGVLVLKIVC-------GKKNN 210
++ + G + +++ +++ + +DV+ FGV + +I+ G KNN
Sbjct: 543 DSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN 599
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 43/80 (53%), Gaps = 6/80 (7%)
Query: 129 VIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVS 188
+IHRDLK SN+ +++ KI DFG+AR +G V T Y + E ++
Sbjct: 144 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTG-----YVATRWYRAPEIMLNWMHY 198
Query: 189 IKT-DVFGFGVLVLKIVCGK 207
+T D++ G ++ +++ G+
Sbjct: 199 NQTVDIWSVGCIMAELLTGR 218
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 43/85 (50%), Gaps = 10/85 (11%)
Query: 129 VIHRDLKASNILLDDQLNTKISDFGMARIF--GVNESGANTNRIVGTYGYMSLEYTMSGT 186
+ HRDLK+ NIL+ I+D G+A + N+ N VGT YM+ E + T
Sbjct: 163 IAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPE-VLDET 221
Query: 187 VSI-------KTDVFGFGVLVLKIV 204
+ + + D++ FG+++ ++
Sbjct: 222 IQVDCFDSYKRVDIWAFGLVLWEVA 246
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 43/80 (53%), Gaps = 6/80 (7%)
Query: 129 VIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVS 188
+IHRDLK SN+ +++ KI DFG+AR +G V T Y + E ++
Sbjct: 152 IIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTG-----YVATRWYRAPEIMLNWMHY 206
Query: 189 IKT-DVFGFGVLVLKIVCGK 207
+T D++ G ++ +++ G+
Sbjct: 207 NQTVDIWSVGCIMAELLTGR 226
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 43/80 (53%), Gaps = 6/80 (7%)
Query: 129 VIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVS 188
+IHRDLK SN+ +++ KI DFG+AR +G V T Y + E ++
Sbjct: 148 IIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTG-----YVATRWYRAPEIMLNWMHY 202
Query: 189 IKT-DVFGFGVLVLKIVCGK 207
+T D++ G ++ +++ G+
Sbjct: 203 NQTVDIWSVGCIMAELLTGR 222
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 75/162 (46%), Gaps = 19/162 (11%)
Query: 61 GQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLV---------YEFMPNK-SLDSS 110
G R + + E ++ ++Q+ N++ L + + +L+ ++F+ K SL
Sbjct: 55 GVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEE 114
Query: 111 FSGTF-KDLL-CLHKYSRLRVIHRDLKASNILLDD----QLNTKISDFGMARIFGVNESG 164
+ F K +L ++ L++ H DLK NI+L D + KI DFG+A + G
Sbjct: 115 EATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI---DFG 171
Query: 165 ANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKIVCG 206
I GT +++ E + ++ D++ GV+ ++ G
Sbjct: 172 NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 75/162 (46%), Gaps = 19/162 (11%)
Query: 61 GQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLV---------YEFMPNK-SLDSS 110
G R + + E ++ ++Q+ N++ L + + +L+ ++F+ K SL
Sbjct: 55 GVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEE 114
Query: 111 FSGTF-KDLL-CLHKYSRLRVIHRDLKASNILLDD----QLNTKISDFGMARIFGVNESG 164
+ F K +L ++ L++ H DLK NI+L D + KI DFG+A + G
Sbjct: 115 EATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI---DFG 171
Query: 165 ANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKIVCG 206
I GT +++ E + ++ D++ GV+ ++ G
Sbjct: 172 NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 37.4 bits (85), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 42/80 (52%), Gaps = 6/80 (7%)
Query: 129 VIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVS 188
+IHRDLK SN+ +++ KI DFG+AR G V T Y + E ++
Sbjct: 166 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGX-----VATRWYRAPEIMLNWMHY 220
Query: 189 IKT-DVFGFGVLVLKIVCGK 207
+T D++ G ++ +++ G+
Sbjct: 221 NQTVDIWSVGCIMAELLTGR 240
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 84/201 (41%), Gaps = 43/201 (21%)
Query: 40 ILVGKFPNEQEVAIKRLAWTSGQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHG------- 92
+ +GK+ E+ VA+K + +T+ + + E +++ N++ + I G
Sbjct: 53 VWMGKWRGEK-VAVK-VFFTTEEASWFRETEIYQTVLMRHENILGFIAADIKGTGSWTQL 110
Query: 93 ------EERLLVYEFMPNKSLD---------SSFSGTFKDLLC-LHK-----YSRLRVIH 131
E +Y+++ + +LD SS SG LC LH + + H
Sbjct: 111 YLITDYHENGSLYDYLKSTTLDAKSMLKLAYSSVSG-----LCHLHTEIFSTQGKPAIAH 165
Query: 132 RDLKASNILLDDQLNTKISDFGMARIF--GVNESGANTNRIVGTYGYMSLEYTMSG---- 185
RDLK+ NIL+ I+D G+A F NE N VGT YM E
Sbjct: 166 RDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRN 225
Query: 186 --TVSIKTDVFGFGVLVLKIV 204
I D++ FG+++ ++
Sbjct: 226 HFQSYIMADMYSFGLILWEVA 246
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 42/80 (52%), Gaps = 6/80 (7%)
Query: 129 VIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVS 188
+IHRDLK SN+ +++ KI DFG+AR + V T Y + E ++
Sbjct: 169 IIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMXGYVATRWYRAPEIMLNWMHY 223
Query: 189 IKT-DVFGFGVLVLKIVCGK 207
+T D++ G ++ +++ G+
Sbjct: 224 NQTVDIWSVGCIMAELLTGR 243
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 37.4 bits (85), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 21/28 (75%)
Query: 129 VIHRDLKASNILLDDQLNTKISDFGMAR 156
+IHRDLK +N LL+ + KI DFG+AR
Sbjct: 152 IIHRDLKPANCLLNQDCSVKICDFGLAR 179
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 37.0 bits (84), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 43/80 (53%), Gaps = 6/80 (7%)
Query: 129 VIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVS 188
+IHRDLK SN+ +++ KI D+G+AR +G V T Y + E ++
Sbjct: 146 IIHRDLKPSNLAVNEDCELKILDYGLARHTDDEMTG-----YVATRWYRAPEIMLNWMHY 200
Query: 189 IKT-DVFGFGVLVLKIVCGK 207
+T D++ G ++ +++ G+
Sbjct: 201 NQTVDIWSVGCIMAELLTGR 220
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 37.0 bits (84), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 75/166 (45%), Gaps = 19/166 (11%)
Query: 57 AWTSGQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLV---------YEFMPNK-S 106
A G R E + E ++ ++ + N++ L + + +L+ ++F+ K S
Sbjct: 52 ASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKES 111
Query: 107 LDSSFSGTF-KDLLCLHKYSRLRVI-HRDLKASNILLDDQ----LNTKISDFGMARIFGV 160
L + +F K +L Y + I H DLK NI+L D+ + K+ DFG+A
Sbjct: 112 LSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI-- 169
Query: 161 NESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKIVCG 206
E G I GT +++ E + ++ D++ GV+ ++ G
Sbjct: 170 -EDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 37.0 bits (84), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 48/96 (50%), Gaps = 8/96 (8%)
Query: 118 LLCLHKYSRLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRI-VGTYGY 176
++ + +L +HRD+K NIL+D + +++DFG + E G + + VGT Y
Sbjct: 185 VIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSC--LKLMEDGTVQSSVAVGTPDY 242
Query: 177 MSLEYTMS-----GTVSIKTDVFGFGVLVLKIVCGK 207
+S E + G + D + GV + +++ G+
Sbjct: 243 ISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGE 278
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 37.0 bits (84), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 75/166 (45%), Gaps = 19/166 (11%)
Query: 57 AWTSGQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLV---------YEFMPNK-S 106
A G R E + E ++ ++ + N++ L + + +L+ ++F+ K S
Sbjct: 52 ASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKES 111
Query: 107 LDSSFSGTF-KDLLCLHKYSRLRVI-HRDLKASNILLDDQ----LNTKISDFGMARIFGV 160
L + +F K +L Y + I H DLK NI+L D+ + K+ DFG+A
Sbjct: 112 LSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI-- 169
Query: 161 NESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKIVCG 206
E G I GT +++ E + ++ D++ GV+ ++ G
Sbjct: 170 -EDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 37.0 bits (84), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 79/171 (46%), Gaps = 21/171 (12%)
Query: 54 KRLAWTSGQG--RVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLV---------YEFM 102
KR + S +G R E + E ++ ++ + N++ L + + +L+ ++F+
Sbjct: 47 KRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFL 106
Query: 103 PNK-SLDSSFSGTF-KDLLCLHKYSRLRVI-HRDLKASNILLDDQ----LNTKISDFGMA 155
K SL + +F K +L Y + I H DLK NI+L D+ + K+ DFG+A
Sbjct: 107 AQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166
Query: 156 RIFGVNESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKIVCG 206
E G I GT +++ E + ++ D++ GV+ ++ G
Sbjct: 167 HEI---EDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 36.6 bits (83), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 38/82 (46%), Gaps = 5/82 (6%)
Query: 129 VIHRDLKASNILLDDQ---LNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSG 185
V+HRDLK N+L D+ L KI DFG AR+ + T T Y + E
Sbjct: 127 VVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCF--TLHYAAPELLNQN 184
Query: 186 TVSIKTDVFGFGVLVLKIVCGK 207
D++ GV++ ++ G+
Sbjct: 185 GYDESCDLWSLGVILYTMLSGQ 206
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 36.6 bits (83), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 82/193 (42%), Gaps = 32/193 (16%)
Query: 39 VILVGKFPNEQEVAIKRLAWTSGQGRVEFQN-EAKLIAKLQYTNLVKLLGCSIHGEERL- 96
V+ K EVAIK++ F+N E +++ +++ N+V L ++
Sbjct: 55 VVFQAKLVESDEVAIKKVLQDK-----RFKNRELQIMRIVKHPNVVDLKAFFYSNGDKKD 109
Query: 97 -----LVYEFMPNKSLDSS-----FSGTFKDLLC-LHKYSRLR---------VIHRDLKA 136
LV E++P +S T LL L+ Y LR + HRD+K
Sbjct: 110 EVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIGICHRDIKP 169
Query: 137 SNILLDDQLNT-KISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGT-VSIKTDVF 194
N+LLD K+ DFG A+I E N + I Y Y + E T + D++
Sbjct: 170 QNLLLDPPSGVLKLIDFGSAKILIAGE--PNVSXICSRY-YRAPELIFGATNYTTNIDIW 226
Query: 195 GFGVLVLKIVCGK 207
G ++ +++ G+
Sbjct: 227 STGCVMAELMQGQ 239
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 36.6 bits (83), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 75/166 (45%), Gaps = 19/166 (11%)
Query: 57 AWTSGQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLV---------YEFMPNK-S 106
A G R E + E ++ ++ + N++ L + + +L+ ++F+ K S
Sbjct: 52 ASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKES 111
Query: 107 LDSSFSGTF-KDLLCLHKYSRLRVI-HRDLKASNILLDDQ----LNTKISDFGMARIFGV 160
L + +F K +L Y + I H DLK NI+L D+ + K+ DFG+A
Sbjct: 112 LSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI-- 169
Query: 161 NESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKIVCG 206
E G I GT +++ E + ++ D++ GV+ ++ G
Sbjct: 170 -EDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 36.6 bits (83), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 21/28 (75%)
Query: 129 VIHRDLKASNILLDDQLNTKISDFGMAR 156
+IHRDLK +N LL+ + K+ DFG+AR
Sbjct: 150 IIHRDLKPANCLLNQDCSVKVCDFGLAR 177
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 36.6 bits (83), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 75/166 (45%), Gaps = 19/166 (11%)
Query: 57 AWTSGQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLV---------YEFMPNK-S 106
A G R E + E ++ ++ + N++ L + + +L+ ++F+ K S
Sbjct: 52 ASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKES 111
Query: 107 LDSSFSGTF-KDLLCLHKYSRLRVI-HRDLKASNILLDDQ----LNTKISDFGMARIFGV 160
L + +F K +L Y + I H DLK NI+L D+ + K+ DFG+A
Sbjct: 112 LSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI-- 169
Query: 161 NESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKIVCG 206
E G I GT +++ E + ++ D++ GV+ ++ G
Sbjct: 170 -EDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 36.6 bits (83), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 75/166 (45%), Gaps = 19/166 (11%)
Query: 57 AWTSGQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLV---------YEFMPNK-S 106
A G R E + E ++ ++ + N++ L + + +L+ ++F+ K S
Sbjct: 52 ASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKES 111
Query: 107 LDSSFSGTF-KDLLCLHKYSRLRVI-HRDLKASNILLDDQ----LNTKISDFGMARIFGV 160
L + +F K +L Y + I H DLK NI+L D+ + K+ DFG+A
Sbjct: 112 LSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI-- 169
Query: 161 NESGANTNRIVGTYGYMSLEYTMSGTVSIKTDVFGFGVLVLKIVCG 206
E G I GT +++ E + ++ D++ GV+ ++ G
Sbjct: 170 -EDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 36.6 bits (83), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 46/95 (48%), Gaps = 8/95 (8%)
Query: 115 FKDLLCLHKYSRLRVIHRDLKASNILLD-DQLNTKISDFGMARIFGVNESGANTNRIVGT 173
F+ L +H + + HRD+K N+LLD D K+ DFG A+ E N + I
Sbjct: 166 FRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSXICSR 220
Query: 174 YGYMSLEYTMSGT-VSIKTDVFGFGVLVLKIVCGK 207
Y Y + E T + DV+ G ++ +++ G+
Sbjct: 221 Y-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 254
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 36.2 bits (82), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 46/95 (48%), Gaps = 8/95 (8%)
Query: 115 FKDLLCLHKYSRLRVIHRDLKASNILLD-DQLNTKISDFGMARIFGVNESGANTNRIVGT 173
F+ L +H + + HRD+K N+LLD D K+ DFG A+ E N + I
Sbjct: 132 FRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSXICSR 186
Query: 174 YGYMSLEYTMSGT-VSIKTDVFGFGVLVLKIVCGK 207
Y Y + E T + DV+ G ++ +++ G+
Sbjct: 187 Y-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 36.2 bits (82), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 46/95 (48%), Gaps = 8/95 (8%)
Query: 115 FKDLLCLHKYSRLRVIHRDLKASNILLD-DQLNTKISDFGMARIFGVNESGANTNRIVGT 173
F+ L +H + + HRD+K N+LLD D K+ DFG A+ E N + I
Sbjct: 140 FRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSXICSR 194
Query: 174 YGYMSLEYTMSGT-VSIKTDVFGFGVLVLKIVCGK 207
Y Y + E T + DV+ G ++ +++ G+
Sbjct: 195 Y-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 228
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 36.2 bits (82), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 46/95 (48%), Gaps = 8/95 (8%)
Query: 115 FKDLLCLHKYSRLRVIHRDLKASNILLD-DQLNTKISDFGMARIFGVNESGANTNRIVGT 173
F+ L +H + + HRD+K N+LLD D K+ DFG A+ E N + I
Sbjct: 144 FRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSXICSR 198
Query: 174 YGYMSLEYTMSGT-VSIKTDVFGFGVLVLKIVCGK 207
Y Y + E T + DV+ G ++ +++ G+
Sbjct: 199 Y-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 36.2 bits (82), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 46/95 (48%), Gaps = 8/95 (8%)
Query: 115 FKDLLCLHKYSRLRVIHRDLKASNILLD-DQLNTKISDFGMARIFGVNESGANTNRIVGT 173
F+ L +H + + HRD+K N+LLD D K+ DFG A+ E N + I
Sbjct: 151 FRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSXICSR 205
Query: 174 YGYMSLEYTMSGT-VSIKTDVFGFGVLVLKIVCGK 207
Y Y + E T + DV+ G ++ +++ G+
Sbjct: 206 Y-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 239
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 36.2 bits (82), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 46/95 (48%), Gaps = 8/95 (8%)
Query: 115 FKDLLCLHKYSRLRVIHRDLKASNILLD-DQLNTKISDFGMARIFGVNESGANTNRIVGT 173
F+ L +H + + HRD+K N+LLD D K+ DFG A+ E N + I
Sbjct: 132 FRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSXICSR 186
Query: 174 YGYMSLEYTMSGT-VSIKTDVFGFGVLVLKIVCGK 207
Y Y + E T + DV+ G ++ +++ G+
Sbjct: 187 Y-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 36.2 bits (82), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 46/95 (48%), Gaps = 8/95 (8%)
Query: 115 FKDLLCLHKYSRLRVIHRDLKASNILLD-DQLNTKISDFGMARIFGVNESGANTNRIVGT 173
F+ L +H + + HRD+K N+LLD D K+ DFG A+ E N + I
Sbjct: 133 FRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSXICSR 187
Query: 174 YGYMSLEYTMSGT-VSIKTDVFGFGVLVLKIVCGK 207
Y Y + E T + DV+ G ++ +++ G+
Sbjct: 188 Y-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 221
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 36.2 bits (82), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 46/95 (48%), Gaps = 8/95 (8%)
Query: 115 FKDLLCLHKYSRLRVIHRDLKASNILLD-DQLNTKISDFGMARIFGVNESGANTNRIVGT 173
F+ L +H + + HRD+K N+LLD D K+ DFG A+ E N + I
Sbjct: 132 FRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP--NVSXICSR 186
Query: 174 YGYMSLEYTMSGT-VSIKTDVFGFGVLVLKIVCGK 207
Y Y + E T + DV+ G ++ +++ G+
Sbjct: 187 Y-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 36.2 bits (82), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 46/95 (48%), Gaps = 8/95 (8%)
Query: 115 FKDLLCLHKYSRLRVIHRDLKASNILLD-DQLNTKISDFGMARIFGVNESGANTNRIVGT 173
F+ L +H + + HRD+K N+LLD D K+ DFG A+ E N + I
Sbjct: 136 FRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSXICSR 190
Query: 174 YGYMSLEYTMSGT-VSIKTDVFGFGVLVLKIVCGK 207
Y Y + E T + DV+ G ++ +++ G+
Sbjct: 191 Y-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 224
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 36.2 bits (82), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 46/95 (48%), Gaps = 8/95 (8%)
Query: 115 FKDLLCLHKYSRLRVIHRDLKASNILLD-DQLNTKISDFGMARIFGVNESGANTNRIVGT 173
F+ L +H + + HRD+K N+LLD D K+ DFG A+ E N + I
Sbjct: 132 FRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSXICSR 186
Query: 174 YGYMSLEYTMSGT-VSIKTDVFGFGVLVLKIVCGK 207
Y Y + E T + DV+ G ++ +++ G+
Sbjct: 187 Y-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 36.2 bits (82), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 46/95 (48%), Gaps = 8/95 (8%)
Query: 115 FKDLLCLHKYSRLRVIHRDLKASNILLD-DQLNTKISDFGMARIFGVNESGANTNRIVGT 173
F+ L +H + + HRD+K N+LLD D K+ DFG A+ E N + I
Sbjct: 144 FRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSXICSR 198
Query: 174 YGYMSLEYTMSGT-VSIKTDVFGFGVLVLKIVCGK 207
Y Y + E T + DV+ G ++ +++ G+
Sbjct: 199 Y-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 36.2 bits (82), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 46/95 (48%), Gaps = 8/95 (8%)
Query: 115 FKDLLCLHKYSRLRVIHRDLKASNILLD-DQLNTKISDFGMARIFGVNESGANTNRIVGT 173
F+ L +H + + HRD+K N+LLD D K+ DFG A+ E N + I
Sbjct: 166 FRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSYICSR 220
Query: 174 YGYMSLEYTMSGT-VSIKTDVFGFGVLVLKIVCGK 207
Y Y + E T + DV+ G ++ +++ G+
Sbjct: 221 Y-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 254
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 36.2 bits (82), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 46/95 (48%), Gaps = 8/95 (8%)
Query: 115 FKDLLCLHKYSRLRVIHRDLKASNILLD-DQLNTKISDFGMARIFGVNESGANTNRIVGT 173
F+ L +H + + HRD+K N+LLD D K+ DFG A+ E N + I
Sbjct: 132 FRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP--NVSYICSR 186
Query: 174 YGYMSLEYTMSGT-VSIKTDVFGFGVLVLKIVCGK 207
Y Y + E T + DV+ G ++ +++ G+
Sbjct: 187 Y-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 36.2 bits (82), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 46/95 (48%), Gaps = 8/95 (8%)
Query: 115 FKDLLCLHKYSRLRVIHRDLKASNILLD-DQLNTKISDFGMARIFGVNESGANTNRIVGT 173
F+ L +H + + HRD+K N+LLD D K+ DFG A+ E N + I
Sbjct: 132 FRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSYICSR 186
Query: 174 YGYMSLEYTMSGT-VSIKTDVFGFGVLVLKIVCGK 207
Y Y + E T + DV+ G ++ +++ G+
Sbjct: 187 Y-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 36.2 bits (82), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 46/95 (48%), Gaps = 8/95 (8%)
Query: 115 FKDLLCLHKYSRLRVIHRDLKASNILLD-DQLNTKISDFGMARIFGVNESGANTNRIVGT 173
F+ L +H + + HRD+K N+LLD D K+ DFG A+ E N + I
Sbjct: 168 FRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSYICSR 222
Query: 174 YGYMSLEYTMSGT-VSIKTDVFGFGVLVLKIVCGK 207
Y Y + E T + DV+ G ++ +++ G+
Sbjct: 223 Y-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 256
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 36.2 bits (82), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 46/95 (48%), Gaps = 8/95 (8%)
Query: 115 FKDLLCLHKYSRLRVIHRDLKASNILLD-DQLNTKISDFGMARIFGVNESGANTNRIVGT 173
F+ L +H + + HRD+K N+LLD D K+ DFG A+ E N + I
Sbjct: 145 FRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSYICSR 199
Query: 174 YGYMSLEYTMSGT-VSIKTDVFGFGVLVLKIVCGK 207
Y Y + E T + DV+ G ++ +++ G+
Sbjct: 200 Y-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 233
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 36.2 bits (82), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 46/95 (48%), Gaps = 8/95 (8%)
Query: 115 FKDLLCLHKYSRLRVIHRDLKASNILLD-DQLNTKISDFGMARIFGVNESGANTNRIVGT 173
F+ L +H + + HRD+K N+LLD D K+ DFG A+ E N + I
Sbjct: 160 FRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSYICSR 214
Query: 174 YGYMSLEYTMSGT-VSIKTDVFGFGVLVLKIVCGK 207
Y Y + E T + DV+ G ++ +++ G+
Sbjct: 215 Y-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 248
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 36.2 bits (82), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 46/95 (48%), Gaps = 8/95 (8%)
Query: 115 FKDLLCLHKYSRLRVIHRDLKASNILLD-DQLNTKISDFGMARIFGVNESGANTNRIVGT 173
F+ L +H + + HRD+K N+LLD D K+ DFG A+ E N + I
Sbjct: 170 FRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSYICSR 224
Query: 174 YGYMSLEYTMSGT-VSIKTDVFGFGVLVLKIVCGK 207
Y Y + E T + DV+ G ++ +++ G+
Sbjct: 225 Y-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 258
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 36.2 bits (82), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 46/95 (48%), Gaps = 8/95 (8%)
Query: 115 FKDLLCLHKYSRLRVIHRDLKASNILLD-DQLNTKISDFGMARIFGVNESGANTNRIVGT 173
F+ L +H + + HRD+K N+LLD D K+ DFG A+ E N + I
Sbjct: 211 FRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSYICSR 265
Query: 174 YGYMSLEYTMSGT-VSIKTDVFGFGVLVLKIVCGK 207
Y Y + E T + DV+ G ++ +++ G+
Sbjct: 266 Y-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 299
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 36.2 bits (82), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 46/95 (48%), Gaps = 8/95 (8%)
Query: 115 FKDLLCLHKYSRLRVIHRDLKASNILLD-DQLNTKISDFGMARIFGVNESGANTNRIVGT 173
F+ L +H + + HRD+K N+LLD D K+ DFG A+ E N + I
Sbjct: 137 FRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP--NVSYICSR 191
Query: 174 YGYMSLEYTMSGT-VSIKTDVFGFGVLVLKIVCGK 207
Y Y + E T + DV+ G ++ +++ G+
Sbjct: 192 Y-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 225
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 36.2 bits (82), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 46/95 (48%), Gaps = 8/95 (8%)
Query: 115 FKDLLCLHKYSRLRVIHRDLKASNILLD-DQLNTKISDFGMARIFGVNESGANTNRIVGT 173
F+ L +H + + HRD+K N+LLD D K+ DFG A+ E N + I
Sbjct: 132 FRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSYICSR 186
Query: 174 YGYMSLEYTMSGT-VSIKTDVFGFGVLVLKIVCGK 207
Y Y + E T + DV+ G ++ +++ G+
Sbjct: 187 Y-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 35.8 bits (81), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 41/87 (47%), Gaps = 9/87 (10%)
Query: 127 LRVIHRDLKASNILLD-----DQLNTKISDFGMARIFGVN-ESGANTNRIVGTYGYMSLE 180
L ++HRDLK NIL+ ++ ISDFG+ + V S + + + GT G+++ E
Sbjct: 137 LNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPE 196
Query: 181 YTMSG---TVSIKTDVFGFGVLVLKIV 204
+ D+F G + ++
Sbjct: 197 MLSEDCKENPTYTVDIFSAGCVFYYVI 223
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 35.8 bits (81), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 41/85 (48%), Gaps = 10/85 (11%)
Query: 129 VIHRDLKASNILLDDQLNTKISDFGMARIF--GVNESGANTNRIVGTYGYMSLEYTMSGT 186
+ HRD K+ N+L+ L I+D G+A + G + N VGT YM+ E +
Sbjct: 134 IAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRVGTKRYMAPE-VLDEQ 192
Query: 187 VSIK-------TDVFGFGVLVLKIV 204
+ TD++ FG+++ +I
Sbjct: 193 IRTDCFESYKWTDIWAFGLVLWEIA 217
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 35.8 bits (81), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 48/114 (42%), Gaps = 18/114 (15%)
Query: 127 LRVIHRDLKASNILLD-------------DQLNTKISDFGMARIF--GVNESGANTNRIV 171
L++IHRDLK NIL+ + L ISDFG+ + G N N
Sbjct: 152 LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNPS 211
Query: 172 GTYGYMS---LEYTMSGTVSIKTDVFGFGVLVLKIVCGKKNNKSYHTERPLNLV 222
GT G+ + LE + ++ D+F G + I+ K+ R N++
Sbjct: 212 GTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNII 265
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 35.8 bits (81), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 42/80 (52%), Gaps = 6/80 (7%)
Query: 129 VIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVS 188
+IHRDLK SN+ +++ KI DFG+ R +G V T Y + E ++
Sbjct: 146 IIHRDLKPSNLAVNEDSELKILDFGLCRHTDDEMTG-----YVATRWYRAPEIMLNWMHY 200
Query: 189 IKT-DVFGFGVLVLKIVCGK 207
+T D++ G ++ +++ G+
Sbjct: 201 NQTVDIWSVGCIMAELLTGR 220
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 35.8 bits (81), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 48/114 (42%), Gaps = 18/114 (15%)
Query: 127 LRVIHRDLKASNILLD-------------DQLNTKISDFGMARIF--GVNESGANTNRIV 171
L++IHRDLK NIL+ + L ISDFG+ + G N N
Sbjct: 152 LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNPS 211
Query: 172 GTYGYMS---LEYTMSGTVSIKTDVFGFGVLVLKIVCGKKNNKSYHTERPLNLV 222
GT G+ + LE + ++ D+F G + I+ K+ R N++
Sbjct: 212 GTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNII 265
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 35.8 bits (81), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 19/27 (70%)
Query: 129 VIHRDLKASNILLDDQLNTKISDFGMA 155
+IHRDLK N+LL +Q K+ DFG A
Sbjct: 159 IIHRDLKVENLLLSNQGTIKLCDFGSA 185
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 35.8 bits (81), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 72/165 (43%), Gaps = 25/165 (15%)
Query: 67 FQNEAKLIAKLQYTN--LVKLLGCSIHGEERLLVYE---------FMPNKSLDSSFSGTF 115
++NE + KLQ + +++L I + +V E KS+D ++
Sbjct: 57 YRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSY 116
Query: 116 -KDLL-CLHKYSRLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGT 173
K++L +H + ++H DLK +N L+ D + K+ DFG+A + + + VGT
Sbjct: 117 WKNMLEAVHTIHQHGIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGT 175
Query: 174 YGYMSLEYTMSGTVS-----------IKTDVFGFGVLVLKIVCGK 207
YM E + S K+DV+ G ++ + GK
Sbjct: 176 VNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK 220
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 35.4 bits (80), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 59/127 (46%), Gaps = 14/127 (11%)
Query: 67 FQNEAKLIAKLQYTN--LVKLLGCSIHGEERLLVYE---------FMPNKSLDSSFSGTF 115
++NE + KLQ + +++L I + +V E KS+D ++
Sbjct: 53 YRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSY 112
Query: 116 -KDLL-CLHKYSRLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGT 173
K++L +H + ++H DLK +N L+ D + K+ DFG+A + + + VGT
Sbjct: 113 WKNMLEAVHTIHQHGIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGT 171
Query: 174 YGYMSLE 180
YM E
Sbjct: 172 VNYMPPE 178
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 35.4 bits (80), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 72/165 (43%), Gaps = 25/165 (15%)
Query: 67 FQNEAKLIAKLQYTN--LVKLLGCSIHGEERLLVYE---------FMPNKSLDSSFSGTF 115
++NE + KLQ + +++L I + +V E KS+D ++
Sbjct: 73 YRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSY 132
Query: 116 -KDLL-CLHKYSRLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGT 173
K++L +H + ++H DLK +N L+ D + K+ DFG+A + + + VGT
Sbjct: 133 WKNMLEAVHTIHQHGIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGT 191
Query: 174 YGYMSLEYTMSGTVS-----------IKTDVFGFGVLVLKIVCGK 207
YM E + S K+DV+ G ++ + GK
Sbjct: 192 VNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK 236
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 35.4 bits (80), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 72/165 (43%), Gaps = 25/165 (15%)
Query: 67 FQNEAKLIAKLQYTN--LVKLLGCSIHGEERLLVYE---------FMPNKSLDSSFSGTF 115
++NE + KLQ + +++L I + +V E KS+D ++
Sbjct: 101 YRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSY 160
Query: 116 -KDLL-CLHKYSRLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGT 173
K++L +H + ++H DLK +N L+ D + K+ DFG+A + + + VGT
Sbjct: 161 WKNMLEAVHTIHQHGIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGT 219
Query: 174 YGYMSLEYTMSGTVS-----------IKTDVFGFGVLVLKIVCGK 207
YM E + S K+DV+ G ++ + GK
Sbjct: 220 VNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK 264
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 35.4 bits (80), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 47/96 (48%), Gaps = 7/96 (7%)
Query: 115 FKDLLCLHKYSR-LRVIHRDLKASNILLDDQLNT--KISDFGMARIFGVNESGANTNRIV 171
F+ L+ Y+ ++V HRDLK N LLD KI+DFG ++ ++ + V
Sbjct: 121 FQQLISGVSYAHAMQVAHRDLKLENTLLDGSPAPRLKIADFGYSKASVLH---SQPKSAV 177
Query: 172 GTYGYMSLEYTMSGTVSIK-TDVFGFGVLVLKIVCG 206
GT Y++ E + K DV+ GV + ++ G
Sbjct: 178 GTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVG 213
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 35.4 bits (80), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 42/80 (52%), Gaps = 6/80 (7%)
Query: 129 VIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVS 188
+IHRDLK SN+ +++ KI FG+AR +G V T Y + E ++
Sbjct: 146 IIHRDLKPSNLAVNEDCELKILGFGLARHTDDEMTG-----YVATRWYRAPEIMLNWMHY 200
Query: 189 IKT-DVFGFGVLVLKIVCGK 207
+T D++ G ++ +++ G+
Sbjct: 201 NQTVDIWSVGCIMAELLTGR 220
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 35.0 bits (79), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 52/243 (21%), Positives = 101/243 (41%), Gaps = 39/243 (16%)
Query: 67 FQNEAKLIAKLQYTN--LVKLLGCSIHGEERLLVYE---------FMPNKSLDSSFSGTF 115
++NE + KLQ + +++L I + +V E KS+D ++
Sbjct: 54 YRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSY 113
Query: 116 -KDLL-CLHKYSRLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGT 173
K++L +H + ++H DLK +N L+ D + K+ DFG+A + + + VGT
Sbjct: 114 WKNMLEAVHTIHQHGIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGT 172
Query: 174 YGYMSLEYTMSGTVS-----------IKTDVFGFGVLVLKIVCGKKNNKSYHTERPLNLV 222
YM E + S K+DV+ G ++ + GK ++ +N +
Sbjct: 173 VNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP-----FQQIINQI 227
Query: 223 GIAWQLWNEGKDLELIDLTLDGSCPPNEDAFLLVSCVCK--SKQQIDVQCPMLFPCLLMN 280
+ + ++E D+ P +D ++ C K KQ+I + + P + +
Sbjct: 228 SKLHAIIDPNHEIEFPDI-------PEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQ 280
Query: 281 LLP 283
P
Sbjct: 281 THP 283
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 35.0 bits (79), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 42/80 (52%), Gaps = 6/80 (7%)
Query: 129 VIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVS 188
+IHRDLK SN+ +++ KI D G+AR +G V T Y + E ++
Sbjct: 146 IIHRDLKPSNLAVNEDCELKILDAGLARHTDDEMTG-----YVATRWYRAPEIMLNWMHY 200
Query: 189 IKT-DVFGFGVLVLKIVCGK 207
+T D++ G ++ +++ G+
Sbjct: 201 NQTVDIWSVGCIMAELLTGR 220
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 35.0 bits (79), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 39/179 (21%), Positives = 74/179 (41%), Gaps = 26/179 (14%)
Query: 118 LLCLHKYSRLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYM 177
L +H + ++H DLK +N L+ D + K+ DFG+A + + + VGT YM
Sbjct: 165 LEAVHTIHQHGIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGTVNYM 223
Query: 178 SLEYTMSGTVS-----------IKTDVFGFGVLVLKIVCGKKNNKSYHTERPLNLVGIAW 226
E + S K+DV+ G ++ + GK ++ +N +
Sbjct: 224 PPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP-----FQQIINQISKLH 278
Query: 227 QLWNEGKDLELIDLTLDGSCPPNEDAFLLVSCVCK--SKQQIDVQCPMLFPCLLMNLLP 283
+ + ++E D+ P +D ++ C K KQ+I + + P + + P
Sbjct: 279 AIIDPNHEIEFPDI-------PEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHP 330
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 35.0 bits (79), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 42/80 (52%), Gaps = 6/80 (7%)
Query: 129 VIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVS 188
+IHRDLK SN+ +++ KI DF +AR +G V T Y + E ++
Sbjct: 146 IIHRDLKPSNLAVNEDCELKILDFYLARHTDDEMTG-----YVATRWYRAPEIMLNWMHY 200
Query: 189 IKT-DVFGFGVLVLKIVCGK 207
+T D++ G ++ +++ G+
Sbjct: 201 NQTVDIWSVGCIMAELLTGR 220
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 35.0 bits (79), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 44/87 (50%), Gaps = 7/87 (8%)
Query: 122 HKYSRLRVIHRDLKASNILLDDQLN-TKISDFGMARIFGVNESGANTNRIVGTYGYMSLE 180
H +SR V+HRD+K NIL+D + K+ DFG + +E + + GT Y E
Sbjct: 154 HCHSR-GVVHRDIKDENILIDLRRGCAKLIDFGSGALLH-DEPYTDFD---GTRVYSPPE 208
Query: 181 YTMSGTV-SIKTDVFGFGVLVLKIVCG 206
+ ++ V+ G+L+ +VCG
Sbjct: 209 WISRHQYHALPATVWSLGILLYDMVCG 235
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 34.7 bits (78), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 42/80 (52%), Gaps = 6/80 (7%)
Query: 129 VIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVS 188
+IHRDLK SN+ +++ KI D G+AR +G V T Y + E ++
Sbjct: 146 IIHRDLKPSNLAVNEDCELKILDRGLARHTDDEMTG-----YVATRWYRAPEIMLNWMHY 200
Query: 189 IKT-DVFGFGVLVLKIVCGK 207
+T D++ G ++ +++ G+
Sbjct: 201 NQTVDIWSVGCIMAELLTGR 220
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 34.7 bits (78), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Query: 118 LLCLHKYSRLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRI-VGTYGY 176
++ + RL +HRD+K NILLD + +++DFG + G + + VGT Y
Sbjct: 172 VMAIDSVHRLGYVHRDIKPDNILLDRCGHIRLADFG--SCLKLRADGTVRSLVAVGTPDY 229
Query: 177 MSLE 180
+S E
Sbjct: 230 LSPE 233
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 34.3 bits (77), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 69/165 (41%), Gaps = 25/165 (15%)
Query: 63 GRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMP------NKSLDS------- 109
G + E +L+ +L++ N+++L+ ++ EE+ +Y M + LDS
Sbjct: 49 GEANVKKEIQLLRRLRHKNVIQLVDV-LYNEEKQKMYMVMEYCVCGMQEMLDSVPEKRFP 107
Query: 110 --SFSGTFKDLLCLHKYSRLR-VIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGAN 166
G F L+ +Y + ++H+D+K N+LL KIS G+A +
Sbjct: 108 VCQAHGYFCQLIDGLEYLHSQGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDT 167
Query: 167 TNRIVGTYGYMSLEY-----TMSGTVSIKTDVFGFGVLVLKIVCG 206
G+ + E T SG K D++ GV + I G
Sbjct: 168 CRTSQGSPAFQPPEIANGLDTFSG---FKVDIWSAGVTLYNITTG 209
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 34.3 bits (77), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 42/80 (52%), Gaps = 6/80 (7%)
Query: 129 VIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGTVS 188
+IHRDLK SN+ +++ KI D G+AR +G V T Y + E ++
Sbjct: 146 IIHRDLKPSNLAVNEDCELKILDGGLARHTDDEMTG-----YVATRWYRAPEIMLNWMHY 200
Query: 189 IKT-DVFGFGVLVLKIVCGK 207
+T D++ G ++ +++ G+
Sbjct: 201 NQTVDIWSVGCIMAELLTGR 220
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 34.3 bits (77), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 69/167 (41%), Gaps = 42/167 (25%)
Query: 64 RVEFQNEAKLIAKLQYTNLVKLLGC---SIHGEERL-LVYEFMPNKSLDSSFSGTFKDLL 119
R F+ EA+ + LQ+ N+V+ ++ G++ + LV E SGT K L
Sbjct: 69 RQRFKEEAEXLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELXT--------SGTLKTYL 120
Query: 120 CLHKYSRLRV----------------------IHRDLKASNILLDDQLNT-KISDFGMAR 156
K +++V IHRDLK NI + + KI D G+A
Sbjct: 121 KRFKVXKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLAT 180
Query: 157 IFGVNESGANTNRIVGTYGYMSLE-YTMSGTVSIKTDVFGFGVLVLK 202
+ + + ++GT + + E Y S+ DV+ FG L+
Sbjct: 181 L----KRASFAKAVIGTPEFXAPEXYEEKYDESV--DVYAFGXCXLE 221
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 34.3 bits (77), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 71/165 (43%), Gaps = 25/165 (15%)
Query: 67 FQNEAKLIAKLQYTN--LVKLLGCSIHGEERLLVYE---------FMPNKSLDSSFSGTF 115
++NE + KLQ + +++L I + +V E KS+D ++
Sbjct: 73 YRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSY 132
Query: 116 -KDLL-CLHKYSRLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGT 173
K++L +H + ++H DLK +N L+ D + K+ DFG+A + + VGT
Sbjct: 133 WKNMLEAVHTIHQHGIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDXXXVVKDSQVGT 191
Query: 174 YGYMSLEYTMSGTVS-----------IKTDVFGFGVLVLKIVCGK 207
YM E + S K+DV+ G ++ + GK
Sbjct: 192 VNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK 236
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 33.9 bits (76), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 41/83 (49%), Gaps = 6/83 (7%)
Query: 127 LRVIHRDLKASNILLDDQLNT--KISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMS 184
++V HRDLK N LLD KI DFG ++ ++ +T VGT Y++ E +
Sbjct: 134 MQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKST---VGTPAYIAPEVLLK 190
Query: 185 GTVSIK-TDVFGFGVLVLKIVCG 206
K DV+ GV + ++ G
Sbjct: 191 KEYDGKVADVWSCGVTLYVMLVG 213
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 33.9 bits (76), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 41/83 (49%), Gaps = 6/83 (7%)
Query: 127 LRVIHRDLKASNILLDDQLNT--KISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMS 184
++V HRDLK N LLD KI DFG ++ ++ +T VGT Y++ E +
Sbjct: 133 MQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKST---VGTPAYIAPEVLLK 189
Query: 185 GTVSIK-TDVFGFGVLVLKIVCG 206
K DV+ GV + ++ G
Sbjct: 190 KEYDGKVADVWSCGVTLYVMLVG 212
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 33.9 bits (76), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 46/96 (47%), Gaps = 7/96 (7%)
Query: 115 FKDLLCLHKYSR-LRVIHRDLKASNILLDDQLNT--KISDFGMARIFGVNESGANTNRIV 171
F+ LL Y +++ HRDLK N LLD KI DFG ++ ++ +T V
Sbjct: 122 FQQLLSGVSYCHSMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKST---V 178
Query: 172 GTYGYMSLEYTMSGTVSIK-TDVFGFGVLVLKIVCG 206
GT Y++ E + K DV+ GV + ++ G
Sbjct: 179 GTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVG 214
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 33.9 bits (76), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 46/95 (48%), Gaps = 6/95 (6%)
Query: 115 FKDLLCLHKYSRLRVIHRDLKASNILLDDQLNT-KISDFGMARIFGVNESGANTNRIVGT 173
+ + CLH S + V HRD+K N+L+++ T K+ DFG A+ +E N I
Sbjct: 139 IRSIGCLHLPS-VNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSE--PNVAYICSR 195
Query: 174 YGYMSLEYTMSGT-VSIKTDVFGFGVLVLKIVCGK 207
Y Y + E + D++ G + +++ G+
Sbjct: 196 Y-YRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGE 229
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 33.9 bits (76), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Query: 129 VIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYM 177
++H+DLK+ N+ D+ I+DFG+ I GV ++G +++ G++
Sbjct: 151 ILHKDLKSKNVFYDNG-KVVITDFGLFSISGVLQAGRREDKLRIQNGWL 198
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 33.5 bits (75), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 34/154 (22%), Positives = 59/154 (38%), Gaps = 18/154 (11%)
Query: 68 QNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSLDSSFSGTFKDLLCLHKYSRL 127
+ E + ++ L++ LV L E +++YEFM L + + +
Sbjct: 96 RKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYM 155
Query: 128 R-------------VIHRDLKASNILLDDQLNT--KISDFGMARIFGVNESGANTNRIVG 172
R +H DLK NI+ + + K+ DFG+ +S T G
Sbjct: 156 RQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVT---TG 212
Query: 173 TYGYMSLEYTMSGTVSIKTDVFGFGVLVLKIVCG 206
T + + E V TD++ GVL ++ G
Sbjct: 213 TAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSG 246
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 33.5 bits (75), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 34/154 (22%), Positives = 59/154 (38%), Gaps = 18/154 (11%)
Query: 68 QNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKSLDSSFSGTFKDLLCLHKYSRL 127
+ E + ++ L++ LV L E +++YEFM L + + +
Sbjct: 202 RKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYM 261
Query: 128 R-------------VIHRDLKASNILLDDQLNT--KISDFGMARIFGVNESGANTNRIVG 172
R +H DLK NI+ + + K+ DFG+ +S T G
Sbjct: 262 RQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVT---TG 318
Query: 173 TYGYMSLEYTMSGTVSIKTDVFGFGVLVLKIVCG 206
T + + E V TD++ GVL ++ G
Sbjct: 319 TAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSG 352
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 33.5 bits (75), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 47/118 (39%), Gaps = 22/118 (18%)
Query: 127 LRVIHRDLKASNILLD-------------DQLNTKISDFGMARIFGVNESG--ANTNRIV 171
L++IHRDLK NIL+ + L ISDFG+ + +S N N
Sbjct: 134 LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRTNLNNPS 193
Query: 172 GTYGYMSLEYTMSGT-------VSIKTDVFGFGVLVLKIVCGKKNNKSYHTERPLNLV 222
GT G+ + E ++ D+F G + I+ K+ R N++
Sbjct: 194 GTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNII 251
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 33.5 bits (75), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 50/111 (45%), Gaps = 19/111 (17%)
Query: 47 NEQEVAIKRLAWTSGQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKS 106
+E EV +K L F A +++KL + +LV G + G+E +LV EF+ S
Sbjct: 39 HETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDENILVQEFVKFGS 98
Query: 107 LDSSFSGTFKDLLCLHKYSRLRV----------------IHRDLKASNILL 141
LD+ K+ C++ +L V IH ++ A NILL
Sbjct: 99 LDTYLK---KNKNCINILWKLEVAKQLAAAMHFLEENTLIHGNVCAKNILL 146
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 33.5 bits (75), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 44/88 (50%), Gaps = 16/88 (18%)
Query: 129 VIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANT-----NRIVGTYGYMSLEYTM 183
+ HRDLK+ NIL+ I+D G+A ++S +T N VGT YM+ E +
Sbjct: 129 IAHRDLKSKNILVKKNGTCCIADLGLAV---RHDSATDTIDIAPNHRVGTKRYMAPE-VL 184
Query: 184 SGTVSIK-------TDVFGFGVLVLKIV 204
++++K D++ G++ +I
Sbjct: 185 DDSINMKHFESFKRADIYAMGLVFWEIA 212
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 33.5 bits (75), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 44/88 (50%), Gaps = 16/88 (18%)
Query: 129 VIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANT-----NRIVGTYGYMSLEYTM 183
+ HRDLK+ NIL+ I+D G+A ++S +T N VGT YM+ E +
Sbjct: 130 IAHRDLKSKNILVKKNGTCCIADLGLAV---RHDSATDTIDIAPNHRVGTKRYMAPE-VL 185
Query: 184 SGTVSIK-------TDVFGFGVLVLKIV 204
++++K D++ G++ +I
Sbjct: 186 DDSINMKHFESFKRADIYAMGLVFWEIA 213
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 33.1 bits (74), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 40/95 (42%), Gaps = 16/95 (16%)
Query: 78 QYTNLVKLLGCSIHGEERLLVYEFMP-----NKSLDSSFSGTFKDLLCLHKYSRL----- 127
Q+ N++ L G+ LV E M +K L F + LH +
Sbjct: 79 QHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKTVEYLH 138
Query: 128 --RVIHRDLKASNILLDDQLNT----KISDFGMAR 156
V+HRDLK SNIL D+ +I DFG A+
Sbjct: 139 SQGVVHRDLKPSNILYVDESGNPECLRICDFGFAK 173
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 33.1 bits (74), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 40/95 (42%), Gaps = 16/95 (16%)
Query: 78 QYTNLVKLLGCSIHGEERLLVYEFMP-----NKSLDSSFSGTFKDLLCLHKYSRL----- 127
Q+ N++ L G+ LV E M +K L F + LH +
Sbjct: 79 QHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKTVEYLH 138
Query: 128 --RVIHRDLKASNILLDDQLNT----KISDFGMAR 156
V+HRDLK SNIL D+ +I DFG A+
Sbjct: 139 SQGVVHRDLKPSNILYVDESGNPECLRICDFGFAK 173
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 33.1 bits (74), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 44/88 (50%), Gaps = 16/88 (18%)
Query: 129 VIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANT-----NRIVGTYGYMSLEYTM 183
+ HRDLK+ NIL+ I+D G+A ++S +T N VGT YM+ E +
Sbjct: 135 IAHRDLKSKNILVKKNGTCCIADLGLAV---RHDSATDTIDIAPNHRVGTKRYMAPE-VL 190
Query: 184 SGTVSIK-------TDVFGFGVLVLKIV 204
++++K D++ G++ +I
Sbjct: 191 DDSINMKHFESFKRADIYAMGLVFWEIA 218
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 33.1 bits (74), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 38/179 (21%), Positives = 73/179 (40%), Gaps = 26/179 (14%)
Query: 118 LLCLHKYSRLRVIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANTNRIVGTYGYM 177
L +H + ++H DLK +N L+ D + K+ DFG+A + + + VG YM
Sbjct: 165 LEAVHTIHQHGIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGAVNYM 223
Query: 178 SLEYTMSGTVS-----------IKTDVFGFGVLVLKIVCGKKNNKSYHTERPLNLVGIAW 226
E + S K+DV+ G ++ + GK ++ +N +
Sbjct: 224 PPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP-----FQQIINQISKLH 278
Query: 227 QLWNEGKDLELIDLTLDGSCPPNEDAFLLVSCVCK--SKQQIDVQCPMLFPCLLMNLLP 283
+ + ++E D+ P +D ++ C K KQ+I + + P + + P
Sbjct: 279 AIIDPNHEIEFPDI-------PEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHP 330
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 33.1 bits (74), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 44/88 (50%), Gaps = 16/88 (18%)
Query: 129 VIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANT-----NRIVGTYGYMSLEYTM 183
+ HRDLK+ NIL+ I+D G+A ++S +T N VGT YM+ E +
Sbjct: 132 IAHRDLKSKNILVKKNGTCCIADLGLAV---RHDSATDTIDIAPNHRVGTKRYMAPE-VL 187
Query: 184 SGTVSIK-------TDVFGFGVLVLKIV 204
++++K D++ G++ +I
Sbjct: 188 DDSINMKHFESFKRADIYAMGLVFWEIA 215
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 33.1 bits (74), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 44/88 (50%), Gaps = 16/88 (18%)
Query: 129 VIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANT-----NRIVGTYGYMSLEYTM 183
+ HRDLK+ NIL+ I+D G+A ++S +T N VGT YM+ E +
Sbjct: 168 IAHRDLKSKNILVKKNGTCCIADLGLAV---RHDSATDTIDIAPNHRVGTKRYMAPE-VL 223
Query: 184 SGTVSIK-------TDVFGFGVLVLKIV 204
++++K D++ G++ +I
Sbjct: 224 DDSINMKHFESFKRADIYAMGLVFWEIA 251
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 33.1 bits (74), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 44/88 (50%), Gaps = 16/88 (18%)
Query: 129 VIHRDLKASNILLDDQLNTKISDFGMARIFGVNESGANT-----NRIVGTYGYMSLEYTM 183
+ HRDLK+ NIL+ I+D G+A ++S +T N VGT YM+ E +
Sbjct: 155 IAHRDLKSKNILVKKNGTCCIADLGLAV---RHDSATDTIDIAPNHRVGTKRYMAPE-VL 210
Query: 184 SGTVSIK-------TDVFGFGVLVLKIV 204
++++K D++ G++ +I
Sbjct: 211 DDSINMKHFESFKRADIYAMGLVFWEIA 238
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 32.7 bits (73), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 42/94 (44%), Gaps = 13/94 (13%)
Query: 118 LLCLHKYSRLRVIHRDLKASNILLDDQLNT--KISDFGMARIFGVNESGANTNRI---VG 172
L CL + R+IH DLK NILL Q + K+ DFG S R+ +
Sbjct: 210 LQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFG--------SSCYEHQRVYXXIQ 261
Query: 173 TYGYMSLEYTMSGTVSIKTDVFGFGVLVLKIVCG 206
+ Y + E + + D++ G ++ +++ G
Sbjct: 262 SRFYRAPEVILGARYGMPIDMWSLGCILAELLTG 295
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 32.7 bits (73), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 42/94 (44%), Gaps = 13/94 (13%)
Query: 118 LLCLHKYSRLRVIHRDLKASNILLDDQLNT--KISDFGMARIFGVNESGANTNRI---VG 172
L CL + R+IH DLK NILL Q + K+ DFG S R+ +
Sbjct: 210 LQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFG--------SSCYEHQRVYTXIQ 261
Query: 173 TYGYMSLEYTMSGTVSIKTDVFGFGVLVLKIVCG 206
+ Y + E + + D++ G ++ +++ G
Sbjct: 262 SRFYRAPEVILGARYGMPIDMWSLGCILAELLTG 295
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 32.7 bits (73), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 42/94 (44%), Gaps = 13/94 (13%)
Query: 118 LLCLHKYSRLRVIHRDLKASNILLDDQLNT--KISDFGMARIFGVNESGANTNRI---VG 172
L CL + R+IH DLK NILL Q + K+ DFG S R+ +
Sbjct: 210 LQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFG--------SSCYEHQRVYTXIQ 261
Query: 173 TYGYMSLEYTMSGTVSIKTDVFGFGVLVLKIVCG 206
+ Y + E + + D++ G ++ +++ G
Sbjct: 262 SRFYRAPEVILGARYGMPIDMWSLGCILAELLTG 295
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 32.7 bits (73), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 61/119 (51%), Gaps = 11/119 (9%)
Query: 48 EQEVAIKRLAWTSGQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKS- 106
E+++A+K L TS R+ + + +A Q N++ + C + ++ ++ ++S
Sbjct: 49 EEKIALKHLIPTSHPIRIAAELQCLTVAGGQ-DNVMGVKYCFRKNDHVVIAMPYLEHESF 107
Query: 107 LDSSFSGTFKDLL--------CLHKYSRLRVIHRDLKASNILLDDQLNT-KISDFGMAR 156
LD S +F+++ L + + ++HRD+K SN L + +L + DFG+A+
Sbjct: 108 LDILNSLSFQEVREYMLNLFKALKRIHQFGIVHRDVKPSNFLYNRRLKKYALVDFGLAQ 166
>pdb|2CMW|A Chain A, Structure Of Human Casein Kinase 1 Gamma-1 In Complex With
2-(2-Hydroxyethylamino)-6-(3-Chloroanilino)-9-
Isopropylpurine (Casp Target)
Length = 310
Score = 32.3 bits (72), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 41/88 (46%), Gaps = 10/88 (11%)
Query: 129 VIHRDLKASNILLDDQLNTK-----ISDFGMARIFGVNESGANT-----NRIVGTYGYMS 178
+I+RD+K N L+ Q N K I DFG+A+ + E+ + + GT YMS
Sbjct: 118 LIYRDVKPENFLIGRQGNKKEHVIHIIDFGLAKEYIDPETKKHIPYREHKSLTGTARYMS 177
Query: 179 LEYTMSGTVSIKTDVFGFGVLVLKIVCG 206
+ + S + D+ G + + + G
Sbjct: 178 INTHLGKEQSRRDDLEALGHMFMYFLRG 205
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 32.3 bits (72), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 49/111 (44%), Gaps = 19/111 (17%)
Query: 47 NEQEVAIKRLAWTSGQGRVEFQNEAKLIAKLQYTNLVKLLGCSIHGEERLLVYEFMPNKS 106
+E EV +K L F A +++KL + +LV G G+E +LV EF+ S
Sbjct: 39 HETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCFCGDENILVQEFVKFGS 98
Query: 107 LDSSFSGTFKDLLCLHKYSRLRV----------------IHRDLKASNILL 141
LD+ K+ C++ +L V IH ++ A NILL
Sbjct: 99 LDTYLK---KNKNCINILWKLEVAKQLAWAMHFLEENTLIHGNVCAKNILL 146
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 32.3 bits (72), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 40/85 (47%), Gaps = 16/85 (18%)
Query: 129 VIHRDLKASNILLD-DQLNTKISDFGMARIFGVNESGANTNRIV-----GTYGYMSLEYT 182
V+HRD+K NIL+D ++ K+ DFG SGA V GT Y E+
Sbjct: 178 VLHRDIKDENILIDLNRGELKLIDFG---------SGALLKDTVYTDFDGTRVYSPPEWI 228
Query: 183 MSGTVSIKT-DVFGFGVLVLKIVCG 206
++ V+ G+L+ +VCG
Sbjct: 229 RYHRYHGRSAAVWSLGILLYDMVCG 253
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 32.0 bits (71), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 7/67 (10%)
Query: 94 ERLLVYEFMPNKSLDSSFSGTFKDLLCLHKYSRLRVIHRDLKASNILLDDQL----NTKI 149
+++L +F + + K + LH V+HRDLK SNIL D+ + +I
Sbjct: 105 DKILRQKFFSEREASAVLFTITKTVEYLHAQG---VVHRDLKPSNILYVDESGNPESIRI 161
Query: 150 SDFGMAR 156
DFG A+
Sbjct: 162 CDFGFAK 168
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 32.0 bits (71), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 7/67 (10%)
Query: 94 ERLLVYEFMPNKSLDSSFSGTFKDLLCLHKYSRLRVIHRDLKASNILLDDQL----NTKI 149
+++L +F + + K + LH V+HRDLK SNIL D+ + +I
Sbjct: 105 DKILRQKFFSEREASAVLFTITKTVEYLHAQG---VVHRDLKPSNILYVDESGNPESIRI 161
Query: 150 SDFGMAR 156
DFG A+
Sbjct: 162 CDFGFAK 168
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 32.0 bits (71), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 40/85 (47%), Gaps = 16/85 (18%)
Query: 129 VIHRDLKASNILLD-DQLNTKISDFGMARIFGVNESGANTNRIV-----GTYGYMSLEYT 182
V+HRD+K NIL+D ++ K+ DFG SGA V GT Y E+
Sbjct: 150 VLHRDIKDENILIDLNRGELKLIDFG---------SGALLKDTVYTDFDGTRVYSPPEWI 200
Query: 183 MSGTVSIKT-DVFGFGVLVLKIVCG 206
++ V+ G+L+ +VCG
Sbjct: 201 RYHRYHGRSAAVWSLGILLYDMVCG 225
>pdb|3OOS|A Chain A, The Structure Of An AlphaBETA FOLD FAMILY HYDROLASE FROM
BACILLUS Anthracis Str. Sterne
Length = 278
Score = 32.0 bits (71), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 11/21 (52%), Positives = 14/21 (66%)
Query: 267 DVQCPMLFPCLLMNLLPGLYL 287
DVQCP +F C + NL+P L
Sbjct: 232 DVQCPYIFSCEIANLIPNATL 252
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 31.6 bits (70), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 40/85 (47%), Gaps = 16/85 (18%)
Query: 129 VIHRDLKASNILLD-DQLNTKISDFGMARIFGVNESGANTNRIV-----GTYGYMSLEYT 182
V+HRD+K NIL+D ++ K+ DFG SGA V GT Y E+
Sbjct: 178 VLHRDIKDENILIDLNRGELKLIDFG---------SGALLKDTVYTDFDGTRVYSPPEWI 228
Query: 183 MSGTVSIKT-DVFGFGVLVLKIVCG 206
++ V+ G+L+ +VCG
Sbjct: 229 RYHRYHGRSAAVWSLGILLYDMVCG 253
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 31.6 bits (70), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 40/85 (47%), Gaps = 16/85 (18%)
Query: 129 VIHRDLKASNILLD-DQLNTKISDFGMARIFGVNESGANTNRIV-----GTYGYMSLEYT 182
V+HRD+K NIL+D ++ K+ DFG SGA V GT Y E+
Sbjct: 136 VLHRDIKDENILIDLNRGELKLIDFG---------SGALLKDTVYTDFDGTRVYSPPEWI 186
Query: 183 MSGTVSIKT-DVFGFGVLVLKIVCG 206
++ V+ G+L+ +VCG
Sbjct: 187 RYHRYHGRSAAVWSLGILLYDMVCG 211
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 31.6 bits (70), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 40/85 (47%), Gaps = 16/85 (18%)
Query: 129 VIHRDLKASNILLD-DQLNTKISDFGMARIFGVNESGANTNRIV-----GTYGYMSLEYT 182
V+HRD+K NIL+D ++ K+ DFG SGA V GT Y E+
Sbjct: 150 VLHRDIKDENILIDLNRGELKLIDFG---------SGALLKDTVYTDFDGTRVYSPPEWI 200
Query: 183 MSGTVSIKT-DVFGFGVLVLKIVCG 206
++ V+ G+L+ +VCG
Sbjct: 201 RYHRYHGRSAAVWSLGILLYDMVCG 225
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 31.6 bits (70), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 40/85 (47%), Gaps = 16/85 (18%)
Query: 129 VIHRDLKASNILLD-DQLNTKISDFGMARIFGVNESGANTNRIV-----GTYGYMSLEYT 182
V+HRD+K NIL+D ++ K+ DFG SGA V GT Y E+
Sbjct: 163 VLHRDIKDENILIDLNRGELKLIDFG---------SGALLKDTVYTDFDGTRVYSPPEWI 213
Query: 183 MSGTVSIKT-DVFGFGVLVLKIVCG 206
++ V+ G+L+ +VCG
Sbjct: 214 RYHRYHGRSAAVWSLGILLYDMVCG 238
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 31.6 bits (70), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 40/85 (47%), Gaps = 16/85 (18%)
Query: 129 VIHRDLKASNILLD-DQLNTKISDFGMARIFGVNESGANTNRIV-----GTYGYMSLEYT 182
V+HRD+K NIL+D ++ K+ DFG SGA V GT Y E+
Sbjct: 151 VLHRDIKDENILIDLNRGELKLIDFG---------SGALLKDTVYTDFDGTRVYSPPEWI 201
Query: 183 MSGTVSIKT-DVFGFGVLVLKIVCG 206
++ V+ G+L+ +VCG
Sbjct: 202 RYHRYHGRSAAVWSLGILLYDMVCG 226
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 31.6 bits (70), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 40/85 (47%), Gaps = 16/85 (18%)
Query: 129 VIHRDLKASNILLD-DQLNTKISDFGMARIFGVNESGANTNRIV-----GTYGYMSLEYT 182
V+HRD+K NIL+D ++ K+ DFG SGA V GT Y E+
Sbjct: 135 VLHRDIKDENILIDLNRGELKLIDFG---------SGALLKDTVYTDFDGTRVYSPPEWI 185
Query: 183 MSGTVSIKT-DVFGFGVLVLKIVCG 206
++ V+ G+L+ +VCG
Sbjct: 186 RYHRYHGRSAAVWSLGILLYDMVCG 210
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 31.6 bits (70), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 40/85 (47%), Gaps = 16/85 (18%)
Query: 129 VIHRDLKASNILLD-DQLNTKISDFGMARIFGVNESGANTNRIV-----GTYGYMSLEYT 182
V+HRD+K NIL+D ++ K+ DFG SGA V GT Y E+
Sbjct: 151 VLHRDIKDENILIDLNRGELKLIDFG---------SGALLKDTVYTDFDGTRVYSPPEWI 201
Query: 183 MSGTVSIKT-DVFGFGVLVLKIVCG 206
++ V+ G+L+ +VCG
Sbjct: 202 RYHRYHGRSAAVWSLGILLYDMVCG 226
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 31.6 bits (70), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 40/85 (47%), Gaps = 16/85 (18%)
Query: 129 VIHRDLKASNILLD-DQLNTKISDFGMARIFGVNESGANTNRIV-----GTYGYMSLEYT 182
V+HRD+K NIL+D ++ K+ DFG SGA V GT Y E+
Sbjct: 134 VLHRDIKDENILIDLNRGELKLIDFG---------SGALLKDTVYTDFDGTRVYSPPEWI 184
Query: 183 MSGTVSIKT-DVFGFGVLVLKIVCG 206
++ V+ G+L+ +VCG
Sbjct: 185 RYHRYHGRSAAVWSLGILLYDMVCG 209
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 31.6 bits (70), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 40/85 (47%), Gaps = 16/85 (18%)
Query: 129 VIHRDLKASNILLD-DQLNTKISDFGMARIFGVNESGANTNRIV-----GTYGYMSLEYT 182
V+HRD+K NIL+D ++ K+ DFG SGA V GT Y E+
Sbjct: 151 VLHRDIKDENILIDLNRGELKLIDFG---------SGALLKDTVYTDFDGTRVYSPPEWI 201
Query: 183 MSGTVSIKT-DVFGFGVLVLKIVCG 206
++ V+ G+L+ +VCG
Sbjct: 202 RYHRYHGRSAAVWSLGILLYDMVCG 226
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 31.6 bits (70), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 40/85 (47%), Gaps = 16/85 (18%)
Query: 129 VIHRDLKASNILLD-DQLNTKISDFGMARIFGVNESGANTNRIV-----GTYGYMSLEYT 182
V+HRD+K NIL+D ++ K+ DFG SGA V GT Y E+
Sbjct: 136 VLHRDIKDENILIDLNRGELKLIDFG---------SGALLKDTVYTDFDGTRVYSPPEWI 186
Query: 183 MSGTVSIKT-DVFGFGVLVLKIVCG 206
++ V+ G+L+ +VCG
Sbjct: 187 RYHRYHGRSAAVWSLGILLYDMVCG 211
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 31.6 bits (70), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 40/85 (47%), Gaps = 16/85 (18%)
Query: 129 VIHRDLKASNILLD-DQLNTKISDFGMARIFGVNESGANTNRIV-----GTYGYMSLEYT 182
V+HRD+K NIL+D ++ K+ DFG SGA V GT Y E+
Sbjct: 163 VLHRDIKDENILIDLNRGELKLIDFG---------SGALLKDTVYTDFDGTRVYSPPEWI 213
Query: 183 MSGTVSIKT-DVFGFGVLVLKIVCG 206
++ V+ G+L+ +VCG
Sbjct: 214 RYHRYHGRSAAVWSLGILLYDMVCG 238
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 31.6 bits (70), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 29/128 (22%), Positives = 58/128 (45%), Gaps = 20/128 (15%)
Query: 97 LVYEFMPN------KSLDSSFSGTFKDLLCLHKYSRLRVI---------HRDLKASNILL 141
++ E++P+ KS S +L+ ++ Y R + HRD+K N+L+
Sbjct: 115 VIMEYVPDTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNLLV 174
Query: 142 DDQLNT-KISDFGMARIFGVNESGANTNRIVGTYGYMSLEYTMSGT-VSIKTDVFGFGVL 199
+ + NT K+ DFG A+ +E + + Y + E + T + D++ G +
Sbjct: 175 NSKDNTLKLCDFGSAKKLIPSEPSVAX---ICSRFYRAPELMLGATEYTPSIDLWSIGCV 231
Query: 200 VLKIVCGK 207
+++ GK
Sbjct: 232 FGELILGK 239
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 31.6 bits (70), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 40/85 (47%), Gaps = 16/85 (18%)
Query: 129 VIHRDLKASNILLD-DQLNTKISDFGMARIFGVNESGANTNRIV-----GTYGYMSLEYT 182
V+HRD+K NIL+D ++ K+ DFG SGA V GT Y E+
Sbjct: 164 VLHRDIKDENILIDLNRGELKLIDFG---------SGALLKDTVYTDFDGTRVYSPPEWI 214
Query: 183 MSGTVSIKT-DVFGFGVLVLKIVCG 206
++ V+ G+L+ +VCG
Sbjct: 215 RYHRYHGRSAAVWSLGILLYDMVCG 239
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 31.6 bits (70), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 40/85 (47%), Gaps = 16/85 (18%)
Query: 129 VIHRDLKASNILLD-DQLNTKISDFGMARIFGVNESGANTNRIV-----GTYGYMSLEYT 182
V+HRD+K NIL+D ++ K+ DFG SGA V GT Y E+
Sbjct: 163 VLHRDIKDENILIDLNRGELKLIDFG---------SGALLKDTVYTDFDGTRVYSPPEWI 213
Query: 183 MSGTVSIKT-DVFGFGVLVLKIVCG 206
++ V+ G+L+ +VCG
Sbjct: 214 RYHRYHGRSAAVWSLGILLYDMVCG 238
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 31.6 bits (70), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 40/85 (47%), Gaps = 16/85 (18%)
Query: 129 VIHRDLKASNILLD-DQLNTKISDFGMARIFGVNESGANTNRIV-----GTYGYMSLEYT 182
V+HRD+K NIL+D ++ K+ DFG SGA V GT Y E+
Sbjct: 164 VLHRDIKDENILIDLNRGELKLIDFG---------SGALLKDTVYTDFDGTRVYSPPEWI 214
Query: 183 MSGTVSIKT-DVFGFGVLVLKIVCG 206
++ V+ G+L+ +VCG
Sbjct: 215 RYHRYHGRSAAVWSLGILLYDMVCG 239
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 31.6 bits (70), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 40/85 (47%), Gaps = 16/85 (18%)
Query: 129 VIHRDLKASNILLD-DQLNTKISDFGMARIFGVNESGANTNRIV-----GTYGYMSLEYT 182
V+HRD+K NIL+D ++ K+ DFG SGA V GT Y E+
Sbjct: 135 VLHRDIKDENILIDLNRGELKLIDFG---------SGALLKDTVYTDFDGTRVYSPPEWI 185
Query: 183 MSGTVSIKT-DVFGFGVLVLKIVCG 206
++ V+ G+L+ +VCG
Sbjct: 186 RYHRYHGRSAAVWSLGILLYDMVCG 210
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 31.6 bits (70), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 40/85 (47%), Gaps = 16/85 (18%)
Query: 129 VIHRDLKASNILLD-DQLNTKISDFGMARIFGVNESGANTNRIV-----GTYGYMSLEYT 182
V+HRD+K NIL+D ++ K+ DFG SGA V GT Y E+
Sbjct: 178 VLHRDIKDENILIDLNRGELKLIDFG---------SGALLKDTVYTDFDGTRVYSPPEWI 228
Query: 183 MSGTVSIKT-DVFGFGVLVLKIVCG 206
++ V+ G+L+ +VCG
Sbjct: 229 RYHRYHGRSAAVWSLGILLYDMVCG 253
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 31.6 bits (70), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 40/85 (47%), Gaps = 16/85 (18%)
Query: 129 VIHRDLKASNILLD-DQLNTKISDFGMARIFGVNESGANTNRIV-----GTYGYMSLEYT 182
V+HRD+K NIL+D ++ K+ DFG SGA V GT Y E+
Sbjct: 164 VLHRDIKDENILIDLNRGELKLIDFG---------SGALLKDTVYTDFDGTRVYSPPEWI 214
Query: 183 MSGTVSIKT-DVFGFGVLVLKIVCG 206
++ V+ G+L+ +VCG
Sbjct: 215 RYHRYHGRSAAVWSLGILLYDMVCG 239
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 31.6 bits (70), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 40/85 (47%), Gaps = 16/85 (18%)
Query: 129 VIHRDLKASNILLD-DQLNTKISDFGMARIFGVNESGANTNRIV-----GTYGYMSLEYT 182
V+HRD+K NIL+D ++ K+ DFG SGA V GT Y E+
Sbjct: 164 VLHRDIKDENILIDLNRGELKLIDFG---------SGALLKDTVYTDFDGTRVYSPPEWI 214
Query: 183 MSGTVSIKT-DVFGFGVLVLKIVCG 206
++ V+ G+L+ +VCG
Sbjct: 215 RYHRYHGRSAAVWSLGILLYDMVCG 239
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.137 0.416
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,475,633
Number of Sequences: 62578
Number of extensions: 435691
Number of successful extensions: 2433
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 820
Number of HSP's successfully gapped in prelim test: 216
Number of HSP's that attempted gapping in prelim test: 1004
Number of HSP's gapped (non-prelim): 1112
length of query: 345
length of database: 14,973,337
effective HSP length: 100
effective length of query: 245
effective length of database: 8,715,537
effective search space: 2135306565
effective search space used: 2135306565
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 52 (24.6 bits)