Query 039518
Match_columns 617
No_of_seqs 685 out of 3403
Neff 6.2
Searched_HMMs 29240
Date Mon Mar 25 18:03:38 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/039518.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/039518hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2p7i_A Hypothetical protein; p 99.6 2E-15 6.7E-20 148.6 14.5 130 228-362 42-197 (250)
2 4hg2_A Methyltransferase type 99.6 3.6E-16 1.2E-20 159.2 8.2 97 229-331 40-136 (257)
3 1vl5_A Unknown conserved prote 99.6 7.3E-15 2.5E-19 147.3 16.3 133 227-363 36-189 (260)
4 3h2b_A SAM-dependent methyltra 99.6 3.9E-15 1.3E-19 143.4 13.8 131 230-363 43-181 (203)
5 3l8d_A Methyltransferase; stru 99.6 3.4E-15 1.2E-19 147.3 13.7 130 228-361 53-197 (242)
6 1pjz_A Thiopurine S-methyltran 99.6 1.7E-15 5.9E-20 147.8 9.5 131 227-361 21-173 (203)
7 1xtp_A LMAJ004091AAA; SGPP, st 99.6 1.9E-15 6.6E-20 150.2 9.7 134 227-362 92-236 (254)
8 3ujc_A Phosphoethanolamine N-m 99.6 1.5E-14 5.2E-19 144.3 15.4 135 225-362 52-204 (266)
9 3g5l_A Putative S-adenosylmeth 99.6 8.1E-15 2.8E-19 146.2 13.3 102 227-331 43-146 (253)
10 1xxl_A YCGJ protein; structura 99.6 2.7E-14 9.4E-19 141.9 16.9 133 226-362 19-172 (239)
11 3hnr_A Probable methyltransfer 99.6 1.4E-14 4.7E-19 141.1 14.0 136 228-368 45-205 (220)
12 3dh0_A SAM dependent methyltra 99.6 1.9E-14 6.4E-19 140.1 14.3 135 227-362 36-179 (219)
13 2o57_A Putative sarcosine dime 99.6 1.4E-14 4.9E-19 148.0 13.6 132 226-361 80-231 (297)
14 3bus_A REBM, methyltransferase 99.6 2.4E-14 8.1E-19 144.2 15.0 133 226-361 59-213 (273)
15 3dli_A Methyltransferase; PSI- 99.6 1.5E-14 5.1E-19 143.5 12.9 128 227-360 40-180 (240)
16 3e23_A Uncharacterized protein 99.6 1.7E-14 5.8E-19 140.0 12.3 131 228-363 43-181 (211)
17 3f4k_A Putative methyltransfer 99.6 3E-14 1E-18 142.0 14.3 131 226-360 44-192 (257)
18 4gek_A TRNA (CMO5U34)-methyltr 99.6 1.2E-14 4.1E-19 148.1 11.5 104 226-331 68-179 (261)
19 3dlc_A Putative S-adenosyl-L-m 99.5 3.1E-14 1.1E-18 137.4 13.7 129 231-362 46-201 (219)
20 3kkz_A Uncharacterized protein 99.5 3E-14 1E-18 143.6 14.0 131 226-360 44-192 (267)
21 3dtn_A Putative methyltransfer 99.5 8.5E-14 2.9E-18 137.0 16.3 102 227-331 43-149 (234)
22 2p35_A Trans-aconitate 2-methy 99.5 5.9E-14 2E-18 139.8 15.2 101 227-332 32-134 (259)
23 1nkv_A Hypothetical protein YJ 99.5 1.8E-14 6.2E-19 143.5 11.4 131 226-360 34-183 (256)
24 3sm3_A SAM-dependent methyltra 99.5 6.6E-14 2.2E-18 136.8 15.1 132 228-363 30-206 (235)
25 3ou2_A SAM-dependent methyltra 99.5 5.6E-14 1.9E-18 136.0 14.3 132 227-362 45-203 (218)
26 3ccf_A Cyclopropane-fatty-acyl 99.5 6.4E-14 2.2E-18 142.3 15.2 101 227-332 56-156 (279)
27 3vc1_A Geranyl diphosphate 2-C 99.5 6.7E-14 2.3E-18 144.9 15.1 133 226-363 115-268 (312)
28 2ex4_A Adrenal gland protein A 99.5 4.2E-14 1.4E-18 140.4 12.9 134 228-363 79-224 (241)
29 3bkw_A MLL3908 protein, S-aden 99.5 5.9E-14 2E-18 138.3 13.9 101 228-331 43-145 (243)
30 3pfg_A N-methyltransferase; N, 99.5 1.4E-13 4.9E-18 138.1 16.3 99 228-330 50-151 (263)
31 3gu3_A Methyltransferase; alph 99.5 1.3E-13 4.4E-18 140.9 15.8 105 226-332 20-128 (284)
32 3jwg_A HEN1, methyltransferase 99.5 1.6E-13 5.4E-18 133.9 15.7 131 228-361 29-189 (219)
33 3cgg_A SAM-dependent methyltra 99.5 2.7E-13 9.4E-18 128.1 16.9 125 228-361 46-172 (195)
34 3lcc_A Putative methyl chlorid 99.5 1.1E-13 3.8E-18 136.6 14.7 129 230-362 68-205 (235)
35 4htf_A S-adenosylmethionine-de 99.5 7.2E-14 2.5E-18 142.1 13.7 131 229-363 69-231 (285)
36 3i9f_A Putative type 11 methyl 99.5 6.9E-14 2.4E-18 130.9 12.5 128 227-363 16-147 (170)
37 3ege_A Putative methyltransfer 99.5 2.5E-14 8.5E-19 144.2 10.1 140 208-361 21-175 (261)
38 4fsd_A Arsenic methyltransfera 99.5 5.3E-14 1.8E-18 150.5 12.5 136 226-362 81-249 (383)
39 2gb4_A Thiopurine S-methyltran 99.5 1E-13 3.4E-18 140.6 13.8 131 228-362 68-225 (252)
40 3ocj_A Putative exported prote 99.5 1.4E-13 4.7E-18 142.1 14.8 135 226-362 116-289 (305)
41 3e8s_A Putative SAM dependent 99.5 1.4E-13 4.8E-18 133.5 13.2 129 228-362 52-207 (227)
42 1vlm_A SAM-dependent methyltra 99.5 1.9E-13 6.4E-18 133.9 14.1 124 229-362 48-186 (219)
43 3mgg_A Methyltransferase; NYSG 99.5 1.6E-13 5.6E-18 138.5 13.5 137 225-363 34-197 (276)
44 2aot_A HMT, histamine N-methyl 99.5 1.5E-13 5E-18 141.0 13.3 133 227-360 51-217 (292)
45 1kpg_A CFA synthase;, cyclopro 99.5 4.1E-13 1.4E-17 136.5 16.4 133 224-362 60-226 (287)
46 4e2x_A TCAB9; kijanose, tetron 99.5 3.8E-14 1.3E-18 152.5 8.8 133 225-361 104-250 (416)
47 3cc8_A Putative methyltransfer 99.5 4.2E-13 1.4E-17 130.4 15.2 130 228-363 32-184 (230)
48 1y8c_A S-adenosylmethionine-de 99.5 1.9E-13 6.4E-18 134.5 12.6 115 208-331 22-143 (246)
49 2gs9_A Hypothetical protein TT 99.5 1.4E-13 4.8E-18 133.3 11.4 99 228-332 36-134 (211)
50 3jwh_A HEN1; methyltransferase 99.5 2.4E-13 8.2E-18 132.6 12.9 101 228-330 29-141 (217)
51 2avn_A Ubiquinone/menaquinone 99.5 1.5E-13 5E-18 138.3 11.2 101 228-332 54-154 (260)
52 2yqz_A Hypothetical protein TT 99.5 2.1E-13 7.1E-18 136.0 12.1 99 227-329 38-140 (263)
53 3bxo_A N,N-dimethyltransferase 99.5 5.9E-13 2E-17 130.8 14.5 100 228-331 40-142 (239)
54 3g2m_A PCZA361.24; SAM-depende 99.4 3.7E-13 1.3E-17 138.1 12.8 98 231-332 85-192 (299)
55 2a14_A Indolethylamine N-methy 99.4 8.8E-14 3E-18 140.8 7.9 134 227-362 54-236 (263)
56 3hem_A Cyclopropane-fatty-acyl 99.4 6E-13 2E-17 136.8 14.2 102 224-331 68-184 (302)
57 3ofk_A Nodulation protein S; N 99.4 3.3E-13 1.1E-17 131.2 11.1 101 227-332 50-156 (216)
58 2xvm_A Tellurite resistance pr 99.4 1.2E-12 4.1E-17 124.8 14.7 131 228-364 32-173 (199)
59 3thr_A Glycine N-methyltransfe 99.4 2.3E-13 8E-18 138.5 10.3 114 207-331 43-176 (293)
60 2kw5_A SLR1183 protein; struct 99.4 6.9E-13 2.4E-17 127.5 12.9 126 231-363 32-170 (202)
61 1ve3_A Hypothetical protein PH 99.4 7.5E-13 2.6E-17 129.0 13.1 100 229-331 39-143 (227)
62 2fk8_A Methoxy mycolic acid sy 99.4 1.3E-12 4.5E-17 135.0 15.0 103 224-332 86-196 (318)
63 1ri5_A MRNA capping enzyme; me 99.4 7.7E-13 2.6E-17 134.3 12.6 104 227-332 63-176 (298)
64 2vdw_A Vaccinia virus capping 99.4 6.3E-13 2.2E-17 138.2 11.5 103 227-331 47-170 (302)
65 3g5t_A Trans-aconitate 3-methy 99.4 6.8E-13 2.3E-17 136.2 11.4 100 228-329 36-148 (299)
66 2p8j_A S-adenosylmethionine-de 99.4 7.9E-13 2.7E-17 127.4 11.1 101 228-331 23-129 (209)
67 3mti_A RRNA methylase; SAM-dep 99.4 6.7E-13 2.3E-17 126.0 10.4 102 227-331 21-136 (185)
68 3m33_A Uncharacterized protein 99.4 1.5E-12 5.2E-17 128.3 13.2 118 228-364 48-167 (226)
69 2pxx_A Uncharacterized protein 99.4 7.4E-13 2.5E-17 127.6 10.2 102 228-331 42-160 (215)
70 3orh_A Guanidinoacetate N-meth 99.4 3.7E-13 1.3E-17 134.4 8.3 143 208-361 48-207 (236)
71 2i62_A Nicotinamide N-methyltr 99.4 8.7E-13 3E-17 131.6 10.6 134 227-362 55-237 (265)
72 2g72_A Phenylethanolamine N-me 99.4 8.8E-13 3E-17 134.7 10.5 133 228-362 71-254 (289)
73 3m70_A Tellurite resistance pr 99.4 4.2E-12 1.4E-16 129.1 14.4 100 228-331 120-224 (286)
74 3e05_A Precorrin-6Y C5,15-meth 99.3 1.7E-11 5.9E-16 118.4 16.5 121 226-359 38-163 (204)
75 2zfu_A Nucleomethylin, cerebra 99.3 3.2E-12 1.1E-16 124.2 11.2 111 228-362 67-177 (215)
76 1yzh_A TRNA (guanine-N(7)-)-me 99.3 9.7E-12 3.3E-16 121.4 14.4 125 229-363 42-181 (214)
77 1zx0_A Guanidinoacetate N-meth 99.3 1.2E-12 4.3E-17 129.7 8.0 100 228-330 60-170 (236)
78 3lpm_A Putative methyltransfer 99.3 3.8E-12 1.3E-16 128.3 11.6 122 228-360 49-197 (259)
79 3g07_A 7SK snRNA methylphospha 99.3 3.8E-12 1.3E-16 131.0 11.7 103 228-331 46-221 (292)
80 3bkx_A SAM-dependent methyltra 99.3 2.9E-12 1E-16 129.0 10.6 104 226-331 41-160 (275)
81 3evz_A Methyltransferase; NYSG 99.3 1.5E-11 5.2E-16 120.7 15.4 126 227-361 54-203 (230)
82 3grz_A L11 mtase, ribosomal pr 99.3 2.5E-11 8.4E-16 117.2 16.0 141 202-363 39-184 (205)
83 3iv6_A Putative Zn-dependent a 99.3 3.6E-12 1.2E-16 130.2 10.5 103 225-332 42-150 (261)
84 3p9n_A Possible methyltransfer 99.3 7.3E-12 2.5E-16 119.8 12.0 122 205-332 25-155 (189)
85 1wzn_A SAM-dependent methyltra 99.3 9.7E-12 3.3E-16 123.6 13.3 102 227-332 40-147 (252)
86 2ld4_A Anamorsin; methyltransf 99.3 4.9E-12 1.7E-16 119.4 10.3 116 224-356 8-128 (176)
87 3d2l_A SAM-dependent methyltra 99.3 6.1E-12 2.1E-16 123.8 11.2 98 229-331 34-138 (243)
88 3q87_B N6 adenine specific DNA 99.3 1.3E-11 4.5E-16 116.8 12.6 117 229-363 24-148 (170)
89 2r3s_A Uncharacterized protein 99.3 1.8E-11 6.2E-16 127.1 14.1 132 227-361 164-320 (335)
90 2fca_A TRNA (guanine-N(7)-)-me 99.3 2E-11 6.9E-16 119.8 13.5 123 229-361 39-176 (213)
91 4df3_A Fibrillarin-like rRNA/T 99.3 2E-11 7E-16 122.6 13.7 135 222-361 71-214 (233)
92 3htx_A HEN1; HEN1, small RNA m 99.3 2.7E-11 9.1E-16 139.4 16.1 104 228-333 721-837 (950)
93 3hm2_A Precorrin-6Y C5,15-meth 99.3 3.4E-11 1.2E-15 112.8 14.0 119 227-360 24-149 (178)
94 3eey_A Putative rRNA methylase 99.3 4.4E-12 1.5E-16 121.6 7.9 104 227-331 21-140 (197)
95 3mq2_A 16S rRNA methyltransfer 99.3 7.6E-12 2.6E-16 122.0 9.7 133 227-361 26-181 (218)
96 3ggd_A SAM-dependent methyltra 99.3 3.3E-12 1.1E-16 126.6 7.2 102 227-331 55-164 (245)
97 3dmg_A Probable ribosomal RNA 99.3 2.4E-12 8.1E-17 138.2 6.4 102 228-332 233-342 (381)
98 3njr_A Precorrin-6Y methylase; 99.3 5.2E-11 1.8E-15 116.3 15.3 118 227-361 54-177 (204)
99 1dus_A MJ0882; hypothetical pr 99.3 2.4E-11 8.2E-16 114.6 12.4 100 228-331 52-158 (194)
100 1nt2_A Fibrillarin-like PRE-rR 99.3 1.6E-11 5.6E-16 120.6 11.6 102 224-331 53-162 (210)
101 3dp7_A SAM-dependent methyltra 99.3 1.7E-11 5.8E-16 130.0 12.5 132 228-362 179-340 (363)
102 3i53_A O-methyltransferase; CO 99.3 6.5E-11 2.2E-15 123.4 16.7 134 224-361 165-318 (332)
103 1xdz_A Methyltransferase GIDB; 99.3 1.6E-11 5.4E-16 122.3 11.4 122 227-360 69-198 (240)
104 1p91_A Ribosomal RNA large sub 99.3 8.6E-12 2.9E-16 125.5 8.9 96 228-332 85-180 (269)
105 2frn_A Hypothetical protein PH 99.3 6.5E-11 2.2E-15 121.2 15.4 124 228-361 125-254 (278)
106 2yxd_A Probable cobalt-precorr 99.2 5.3E-11 1.8E-15 111.4 13.1 122 228-368 35-161 (183)
107 3bgv_A MRNA CAP guanine-N7 met 99.2 1.2E-11 4.1E-16 127.8 8.9 102 228-331 34-156 (313)
108 1l3i_A Precorrin-6Y methyltran 99.2 5.8E-11 2E-15 111.7 12.9 118 227-360 32-156 (192)
109 1fbn_A MJ fibrillarin homologu 99.2 6.9E-11 2.4E-15 116.9 13.3 130 224-362 70-211 (230)
110 3fpf_A Mtnas, putative unchara 99.2 3E-11 1E-15 125.4 10.2 101 224-331 118-223 (298)
111 1af7_A Chemotaxis receptor met 99.2 5.4E-11 1.8E-15 122.2 12.1 102 229-330 106-252 (274)
112 1qzz_A RDMB, aclacinomycin-10- 99.2 1.2E-10 4.3E-15 122.9 15.2 132 226-361 180-336 (374)
113 3gwz_A MMCR; methyltransferase 99.2 1.1E-10 3.7E-15 124.1 14.7 131 226-361 200-353 (369)
114 3p2e_A 16S rRNA methylase; met 99.2 3.2E-11 1.1E-15 119.9 9.6 133 228-361 24-182 (225)
115 2pwy_A TRNA (adenine-N(1)-)-me 99.2 1.1E-10 3.7E-15 116.2 13.4 122 226-362 94-222 (258)
116 3ckk_A TRNA (guanine-N(7)-)-me 99.2 8.6E-11 2.9E-15 117.6 12.5 102 228-331 46-169 (235)
117 2ipx_A RRNA 2'-O-methyltransfe 99.2 3.8E-11 1.3E-15 118.7 9.0 132 224-360 73-213 (233)
118 3lbf_A Protein-L-isoaspartate 99.2 5.8E-11 2E-15 114.9 10.1 96 227-332 76-176 (210)
119 3mcz_A O-methyltransferase; ad 99.2 1.4E-10 4.9E-15 121.6 13.9 131 229-361 180-336 (352)
120 3dxy_A TRNA (guanine-N(7)-)-me 99.2 3.1E-11 1.1E-15 119.4 8.0 101 229-331 35-151 (218)
121 1yb2_A Hypothetical protein TA 99.2 1.4E-10 4.7E-15 118.0 13.1 121 225-361 107-234 (275)
122 2ip2_A Probable phenazine-spec 99.2 1.3E-10 4.6E-15 120.9 13.2 128 230-361 169-319 (334)
123 3id6_C Fibrillarin-like rRNA/T 99.2 2.1E-10 7.1E-15 115.2 14.1 131 223-361 71-213 (232)
124 3g89_A Ribosomal RNA small sub 99.2 8.7E-11 3E-15 118.6 11.2 122 227-360 79-208 (249)
125 2nxc_A L11 mtase, ribosomal pr 99.2 6.7E-11 2.3E-15 119.4 10.2 120 227-362 119-242 (254)
126 3reo_A (ISO)eugenol O-methyltr 99.2 1.6E-10 5.5E-15 122.9 13.6 131 226-362 201-353 (368)
127 2ift_A Putative methylase HI07 99.2 4.2E-11 1.5E-15 116.4 8.3 103 228-334 53-167 (201)
128 1x19_A CRTF-related protein; m 99.2 1.3E-10 4.6E-15 122.5 12.8 133 226-362 188-346 (359)
129 3q7e_A Protein arginine N-meth 99.2 9.4E-11 3.2E-15 124.0 11.3 100 227-329 65-172 (349)
130 1fp1_D Isoliquiritigenin 2'-O- 99.2 6.7E-11 2.3E-15 125.6 10.1 128 227-361 208-357 (372)
131 3lst_A CALO1 methyltransferase 99.2 2.5E-10 8.7E-15 120.1 14.4 131 225-361 181-333 (348)
132 2ozv_A Hypothetical protein AT 99.1 2.2E-10 7.7E-15 115.9 13.2 104 227-331 35-171 (260)
133 3hp7_A Hemolysin, putative; st 99.1 1.8E-10 6.2E-15 119.3 12.7 127 228-360 85-228 (291)
134 1tw3_A COMT, carminomycin 4-O- 99.1 2.5E-10 8.4E-15 120.1 13.9 133 226-362 181-337 (360)
135 3fzg_A 16S rRNA methylase; met 99.1 2.3E-11 8E-16 118.5 5.5 100 228-330 49-152 (200)
136 2b3t_A Protein methyltransfera 99.1 1.6E-10 5.4E-15 117.5 11.9 122 228-360 109-259 (276)
137 1jsx_A Glucose-inhibited divis 99.1 1.5E-10 5.2E-15 111.5 11.0 114 229-360 66-184 (207)
138 1vbf_A 231AA long hypothetical 99.1 9.1E-11 3.1E-15 115.2 9.4 96 227-332 69-167 (231)
139 1fp2_A Isoflavone O-methyltran 99.1 1.2E-10 4.2E-15 122.5 11.0 128 227-361 187-338 (352)
140 2pjd_A Ribosomal RNA small sub 99.1 7.6E-12 2.6E-16 131.8 1.5 100 229-331 197-304 (343)
141 3p9c_A Caffeic acid O-methyltr 99.1 2.2E-10 7.7E-15 121.7 12.6 130 227-362 200-351 (364)
142 3mb5_A SAM-dependent methyltra 99.1 2.3E-10 7.8E-15 114.2 11.9 120 226-361 91-219 (255)
143 1ws6_A Methyltransferase; stru 99.1 7E-11 2.4E-15 109.7 7.6 119 204-333 22-150 (171)
144 2fhp_A Methylase, putative; al 99.1 1.6E-10 5.4E-15 109.0 10.0 120 204-333 26-157 (187)
145 4dzr_A Protein-(glutamine-N5) 99.1 1.1E-11 3.9E-16 119.0 2.1 123 227-360 29-188 (215)
146 2fyt_A Protein arginine N-meth 99.1 2E-10 6.8E-15 121.1 11.6 99 227-328 63-169 (340)
147 3r0q_C Probable protein argini 99.1 2.3E-10 7.9E-15 122.2 11.3 101 226-330 61-169 (376)
148 4dcm_A Ribosomal RNA large sub 99.1 5.4E-11 1.9E-15 127.3 6.4 134 228-372 222-367 (375)
149 2qe6_A Uncharacterized protein 99.1 2E-10 6.9E-15 117.5 10.2 103 229-332 78-198 (274)
150 2fpo_A Methylase YHHF; structu 99.1 1.8E-10 6.2E-15 112.0 9.3 116 207-332 39-162 (202)
151 1i9g_A Hypothetical protein RV 99.1 3E-10 1E-14 114.9 11.0 99 226-331 97-204 (280)
152 3bwc_A Spermidine synthase; SA 99.1 3.1E-10 1.1E-14 117.8 11.3 127 228-360 95-236 (304)
153 1ixk_A Methyltransferase; open 99.1 2.4E-10 8.1E-15 119.3 10.1 129 227-360 117-271 (315)
154 3uwp_A Histone-lysine N-methyl 99.1 1.3E-10 4.6E-15 125.3 8.4 102 226-331 171-289 (438)
155 1ej0_A FTSJ; methyltransferase 99.1 1.5E-10 5E-15 107.0 7.5 97 227-331 21-137 (180)
156 2esr_A Methyltransferase; stru 99.1 1.2E-10 4.2E-15 109.5 6.9 101 228-332 31-140 (177)
157 3opn_A Putative hemolysin; str 99.1 4.4E-11 1.5E-15 119.7 4.0 127 228-362 37-182 (232)
158 2vdv_E TRNA (guanine-N(7)-)-me 99.1 6.7E-10 2.3E-14 111.0 12.5 103 227-331 48-174 (246)
159 1o54_A SAM-dependent O-methylt 99.1 7.9E-10 2.7E-14 112.3 13.2 120 226-361 110-236 (277)
160 3bzb_A Uncharacterized protein 99.1 9E-10 3.1E-14 112.7 13.7 128 228-361 79-234 (281)
161 1dl5_A Protein-L-isoaspartate 99.1 2.1E-10 7.1E-15 119.4 8.6 98 227-331 74-176 (317)
162 1g6q_1 HnRNP arginine N-methyl 99.1 7.5E-10 2.6E-14 116.0 12.6 98 228-328 38-143 (328)
163 1g8a_A Fibrillarin-like PRE-rR 99.1 1.1E-09 3.7E-14 107.5 12.9 132 224-361 69-209 (227)
164 3gdh_A Trimethylguanosine synt 99.0 1.4E-11 4.8E-16 121.9 -0.8 97 228-329 78-180 (241)
165 2yxe_A Protein-L-isoaspartate 99.0 3E-10 1E-14 110.2 8.1 99 227-332 76-179 (215)
166 2y1w_A Histone-arginine methyl 99.0 6.9E-10 2.4E-14 117.2 11.0 100 227-330 49-155 (348)
167 1i1n_A Protein-L-isoaspartate 99.0 5.8E-10 2E-14 109.2 9.3 98 227-332 76-184 (226)
168 1zg3_A Isoflavanone 4'-O-methy 99.0 6.8E-10 2.3E-14 117.1 10.2 127 228-361 193-344 (358)
169 2yvl_A TRMI protein, hypotheti 99.0 1.6E-09 5.5E-14 107.1 12.2 96 227-331 90-191 (248)
170 2pbf_A Protein-L-isoaspartate 99.0 4.5E-10 1.5E-14 110.0 7.8 98 227-331 79-194 (227)
171 3u81_A Catechol O-methyltransf 99.0 4.5E-10 1.5E-14 110.2 7.7 102 228-331 58-171 (221)
172 4a6d_A Hydroxyindole O-methylt 99.0 5.6E-09 1.9E-13 110.4 16.2 132 226-361 177-331 (353)
173 1ne2_A Hypothetical protein TA 99.0 4.8E-09 1.7E-13 100.8 13.9 114 228-359 51-165 (200)
174 3tfw_A Putative O-methyltransf 99.0 9.3E-10 3.2E-14 110.4 9.2 100 228-331 63-171 (248)
175 3ntv_A MW1564 protein; rossman 99.0 9.2E-10 3.2E-14 109.1 9.0 99 228-331 71-177 (232)
176 2plw_A Ribosomal RNA methyltra 99.0 6.4E-10 2.2E-14 106.6 7.6 99 227-331 21-155 (201)
177 2qm3_A Predicted methyltransfe 99.0 7.2E-09 2.4E-13 110.4 15.5 131 228-366 172-311 (373)
178 1jg1_A PIMT;, protein-L-isoasp 99.0 8.6E-10 2.9E-14 109.2 7.6 96 227-332 90-191 (235)
179 2bm8_A Cephalosporin hydroxyla 99.0 3.7E-10 1.3E-14 112.9 5.0 97 229-330 82-187 (236)
180 1o9g_A RRNA methyltransferase; 98.9 1E-09 3.6E-14 109.6 8.3 104 228-331 51-215 (250)
181 3a27_A TYW2, uncharacterized p 98.9 2.9E-09 9.8E-14 108.7 11.6 124 227-359 118-246 (272)
182 2igt_A SAM dependent methyltra 98.9 1E-09 3.5E-14 115.6 8.4 126 228-359 153-299 (332)
183 3tma_A Methyltransferase; thum 98.9 1.7E-09 5.7E-14 114.2 10.0 122 227-360 202-335 (354)
184 3dr5_A Putative O-methyltransf 98.9 7E-10 2.4E-14 109.9 6.7 98 229-330 57-163 (221)
185 3tm4_A TRNA (guanine N2-)-meth 98.9 4.8E-09 1.6E-13 111.9 13.4 120 228-361 217-349 (373)
186 2b25_A Hypothetical protein; s 98.9 9.5E-10 3.3E-14 115.0 7.6 99 226-331 103-220 (336)
187 1r18_A Protein-L-isoaspartate( 98.9 1.1E-09 3.7E-14 107.7 7.5 97 227-331 83-195 (227)
188 3tr6_A O-methyltransferase; ce 98.9 9.1E-10 3.1E-14 107.6 6.5 100 228-331 64-175 (225)
189 3c3p_A Methyltransferase; NP_9 98.9 1.3E-09 4.3E-14 105.8 7.4 97 229-330 57-160 (210)
190 3ajd_A Putative methyltransfer 98.9 1.6E-09 5.5E-14 110.4 8.2 128 227-359 82-236 (274)
191 2yxl_A PH0851 protein, 450AA l 98.9 3.9E-09 1.3E-13 115.4 11.7 130 226-360 257-415 (450)
192 1u2z_A Histone-lysine N-methyl 98.9 1.4E-09 4.8E-14 118.5 8.0 103 226-331 240-360 (433)
193 1wy7_A Hypothetical protein PH 98.9 4.8E-08 1.7E-12 94.0 17.9 120 227-361 48-172 (207)
194 2gpy_A O-methyltransferase; st 98.9 1.9E-09 6.4E-14 106.3 7.8 98 228-330 54-160 (233)
195 3lec_A NADB-rossmann superfami 98.9 1.1E-08 3.8E-13 102.5 13.1 120 228-361 21-146 (230)
196 2wa2_A Non-structural protein 98.9 4.1E-10 1.4E-14 115.7 2.7 96 226-330 80-193 (276)
197 3duw_A OMT, O-methyltransferas 98.9 2.4E-09 8.3E-14 104.5 8.0 100 228-331 58-168 (223)
198 4azs_A Methyltransferase WBDD; 98.9 7.7E-10 2.6E-14 124.4 5.0 98 229-330 67-173 (569)
199 3adn_A Spermidine synthase; am 98.9 4.7E-09 1.6E-13 108.7 10.3 101 229-331 84-199 (294)
200 3b3j_A Histone-arginine methyl 98.9 4.4E-09 1.5E-13 116.1 10.5 99 227-329 157-262 (480)
201 2oxt_A Nucleoside-2'-O-methylt 98.9 5.6E-10 1.9E-14 114.0 2.9 97 226-330 72-185 (265)
202 3gnl_A Uncharacterized protein 98.9 1.4E-08 4.9E-13 102.5 12.9 120 228-361 21-146 (244)
203 1xj5_A Spermidine synthase 1; 98.9 5.3E-09 1.8E-13 110.3 10.0 102 228-331 120-236 (334)
204 3sso_A Methyltransferase; macr 98.8 6.9E-10 2.4E-14 119.4 2.8 96 229-331 217-325 (419)
205 3m6w_A RRNA methylase; rRNA me 98.8 3E-09 1E-13 116.8 7.3 129 227-360 100-255 (464)
206 4hc4_A Protein arginine N-meth 98.8 1.1E-08 3.7E-13 109.6 11.2 97 228-329 83-188 (376)
207 3k6r_A Putative transferase PH 98.8 4.2E-08 1.4E-12 100.9 14.9 135 227-371 124-264 (278)
208 2nyu_A Putative ribosomal RNA 98.8 1.8E-09 6.3E-14 102.8 4.3 99 227-331 21-146 (196)
209 3kr9_A SAM-dependent methyltra 98.8 3E-08 1E-12 99.1 13.0 119 228-361 15-140 (225)
210 2hnk_A SAM-dependent O-methylt 98.8 5.6E-09 1.9E-13 103.5 7.6 99 228-330 60-181 (239)
211 1sqg_A SUN protein, FMU protei 98.8 9.3E-09 3.2E-13 111.6 9.9 127 227-359 245-399 (429)
212 2b78_A Hypothetical protein SM 98.8 6.7E-09 2.3E-13 111.3 8.6 126 228-358 212-356 (385)
213 3cbg_A O-methyltransferase; cy 98.8 5.4E-09 1.8E-13 103.7 7.3 99 229-331 73-183 (232)
214 1iy9_A Spermidine synthase; ro 98.8 8E-09 2.7E-13 105.7 8.7 102 228-331 75-190 (275)
215 4dmg_A Putative uncharacterize 98.8 2.1E-08 7.3E-13 107.9 11.9 125 228-358 214-351 (393)
216 1inl_A Spermidine synthase; be 98.8 9.5E-09 3.2E-13 106.3 8.8 101 229-331 91-206 (296)
217 3r3h_A O-methyltransferase, SA 98.8 9.8E-10 3.4E-14 110.2 1.2 99 229-331 61-171 (242)
218 2i7c_A Spermidine synthase; tr 98.8 7.4E-09 2.5E-13 106.3 7.7 102 228-331 78-193 (283)
219 1uir_A Polyamine aminopropyltr 98.8 1.1E-08 3.7E-13 106.7 8.7 101 228-330 77-195 (314)
220 2b2c_A Spermidine synthase; be 98.8 8.6E-09 3E-13 107.7 7.9 100 229-330 109-222 (314)
221 2o07_A Spermidine synthase; st 98.8 9.6E-09 3.3E-13 106.8 7.9 101 228-330 95-209 (304)
222 3gjy_A Spermidine synthase; AP 98.8 1.2E-08 4.1E-13 106.8 8.5 120 207-331 68-201 (317)
223 2pt6_A Spermidine synthase; tr 98.8 1E-08 3.5E-13 107.3 8.0 102 228-331 116-231 (321)
224 2h00_A Methyltransferase 10 do 98.8 3.9E-09 1.3E-13 105.4 4.5 100 228-328 65-190 (254)
225 1sui_A Caffeoyl-COA O-methyltr 98.7 4.6E-09 1.6E-13 105.6 4.9 98 229-330 80-190 (247)
226 2avd_A Catechol-O-methyltransf 98.7 5E-09 1.7E-13 102.6 4.9 100 228-331 69-180 (229)
227 2frx_A Hypothetical protein YE 98.7 2.1E-08 7.3E-13 110.6 10.4 123 228-355 117-266 (479)
228 3giw_A Protein of unknown func 98.7 8.8E-09 3E-13 105.8 6.7 101 230-331 80-201 (277)
229 3dou_A Ribosomal RNA large sub 98.7 6.9E-09 2.4E-13 100.4 5.5 95 227-330 24-139 (191)
230 3c0k_A UPF0064 protein YCCW; P 98.7 3.1E-08 1E-12 106.3 11.0 125 228-358 220-364 (396)
231 3m4x_A NOL1/NOP2/SUN family pr 98.7 1E-08 3.4E-13 112.5 7.2 129 227-360 104-259 (456)
232 2p41_A Type II methyltransfera 98.7 3.3E-09 1.1E-13 110.4 2.8 100 226-331 80-192 (305)
233 2cmg_A Spermidine synthase; tr 98.7 2.1E-08 7.3E-13 102.1 8.3 92 228-331 72-172 (262)
234 1mjf_A Spermidine synthase; sp 98.7 1.7E-08 5.7E-13 103.5 7.4 99 228-330 75-193 (281)
235 2as0_A Hypothetical protein PH 98.7 3.1E-08 1.1E-12 106.1 9.4 124 228-357 217-359 (396)
236 1nv8_A HEMK protein; class I a 98.7 4.2E-08 1.4E-12 100.8 9.9 99 229-331 124-250 (284)
237 3v97_A Ribosomal RNA large sub 98.7 3.4E-08 1.2E-12 113.8 10.1 104 228-333 539-660 (703)
238 2f8l_A Hypothetical protein LM 98.7 2.8E-08 9.4E-13 104.5 8.6 124 228-356 130-278 (344)
239 3c3y_A Pfomt, O-methyltransfer 98.7 1.5E-08 5E-13 101.1 6.1 98 229-330 71-181 (237)
240 1wxx_A TT1595, hypothetical pr 98.7 5.1E-08 1.7E-12 104.1 10.3 123 228-357 209-349 (382)
241 2xyq_A Putative 2'-O-methyl tr 98.6 3.6E-08 1.2E-12 102.0 7.3 118 223-360 58-193 (290)
242 3lcv_B Sisomicin-gentamicin re 98.6 1.1E-07 3.7E-12 96.8 9.9 130 229-360 133-268 (281)
243 1zq9_A Probable dimethyladenos 98.6 6.9E-08 2.4E-12 99.2 8.2 95 227-327 27-144 (285)
244 3frh_A 16S rRNA methylase; met 98.6 8.2E-08 2.8E-12 96.7 8.4 97 227-328 104-204 (253)
245 2yx1_A Hypothetical protein MJ 98.5 2.4E-07 8.2E-12 97.3 11.2 92 228-331 195-292 (336)
246 2h1r_A Dimethyladenosine trans 98.5 1.7E-07 6E-12 96.9 8.3 69 227-300 41-114 (299)
247 1uwv_A 23S rRNA (uracil-5-)-me 98.5 1.7E-06 5.8E-11 94.0 15.9 117 227-360 285-410 (433)
248 2jjq_A Uncharacterized RNA met 98.5 9.1E-07 3.1E-11 96.1 13.7 96 227-331 289-388 (425)
249 2ih2_A Modification methylase 98.5 1.1E-07 3.7E-12 101.7 6.2 120 229-357 40-187 (421)
250 1qam_A ERMC' methyltransferase 98.4 4.8E-07 1.7E-11 90.7 8.6 69 227-299 29-101 (244)
251 1yub_A Ermam, rRNA methyltrans 98.4 1.2E-08 4.3E-13 102.0 -3.4 99 227-330 28-145 (245)
252 3dmg_A Probable ribosomal RNA 98.3 1.1E-05 3.6E-10 86.5 17.7 281 230-573 47-341 (381)
253 2xvm_A Tellurite resistance pr 98.3 5.2E-07 1.8E-11 85.4 6.6 117 469-596 34-172 (199)
254 3e8s_A Putative SAM dependent 98.3 1.5E-06 5E-11 83.8 7.8 134 469-612 54-227 (227)
255 2qfm_A Spermine synthase; sper 98.2 9.9E-07 3.4E-11 93.8 6.9 102 228-331 188-315 (364)
256 3pfg_A N-methyltransferase; N, 98.2 8.9E-07 3E-11 88.4 6.1 113 449-571 32-150 (263)
257 2okc_A Type I restriction enzy 98.2 9E-07 3.1E-11 96.4 6.5 117 208-332 158-309 (445)
258 2zfu_A Nucleomethylin, cerebra 98.2 5.4E-06 1.8E-10 80.0 11.1 149 440-612 26-191 (215)
259 3gru_A Dimethyladenosine trans 98.2 8.6E-07 2.9E-11 91.9 5.5 83 208-300 37-122 (295)
260 3jwg_A HEN1, methyltransferase 98.2 2.5E-06 8.5E-11 82.7 8.4 160 443-612 7-210 (219)
261 2b9e_A NOL1/NOP2/SUN domain fa 98.2 4E-06 1.4E-10 87.3 9.7 106 227-333 101-237 (309)
262 3h2b_A SAM-dependent methyltra 98.2 2E-06 6.7E-11 82.2 6.5 133 469-611 43-194 (203)
263 1kpg_A CFA synthase;, cyclopro 98.2 1.3E-06 4.5E-11 88.3 5.3 107 457-572 56-168 (287)
264 3ldu_A Putative methylase; str 98.2 3E-06 1E-10 90.8 8.4 104 227-331 194-345 (385)
265 3k0b_A Predicted N6-adenine-sp 98.1 4.2E-06 1.4E-10 90.0 8.7 103 228-331 201-351 (393)
266 3i9f_A Putative type 11 methyl 98.1 6.5E-06 2.2E-10 76.3 8.4 126 469-612 19-160 (170)
267 1y8c_A S-adenosylmethionine-de 98.1 8.7E-06 3E-10 79.4 9.4 114 447-571 20-141 (246)
268 3dlc_A Putative S-adenosyl-L-m 98.1 5.4E-06 1.8E-10 79.3 7.6 94 470-572 46-148 (219)
269 3axs_A Probable N(2),N(2)-dime 98.1 5.1E-06 1.8E-10 89.3 7.9 98 228-330 52-158 (392)
270 3ocj_A Putative exported prote 98.1 3.2E-06 1.1E-10 86.8 6.0 139 463-612 116-304 (305)
271 3mti_A RRNA methylase; SAM-dep 98.1 3E-06 1E-10 79.9 5.4 144 463-611 20-183 (185)
272 3evf_A RNA-directed RNA polyme 98.1 3.5E-06 1.2E-10 86.1 6.2 104 226-330 72-184 (277)
273 3ldg_A Putative uncharacterize 98.1 7.9E-06 2.7E-10 87.7 9.2 103 228-331 194-344 (384)
274 4hg2_A Methyltransferase type 98.1 1.3E-06 4.5E-11 88.5 3.0 93 469-571 41-134 (257)
275 3tqs_A Ribosomal RNA small sub 98.1 4.8E-06 1.7E-10 84.4 7.0 81 208-299 16-103 (255)
276 3hnr_A Probable methyltransfer 98.0 2.7E-06 9.3E-11 82.1 4.7 132 468-612 46-212 (220)
277 3hem_A Cyclopropane-fatty-acyl 98.0 2.9E-06 9.9E-11 86.7 4.8 107 456-572 63-183 (302)
278 2fk8_A Methoxy mycolic acid sy 98.0 3.7E-06 1.3E-10 86.5 5.3 110 454-572 79-194 (318)
279 1nkv_A Hypothetical protein YJ 98.0 3.3E-06 1.1E-10 83.5 4.5 105 455-572 26-140 (256)
280 1xtp_A LMAJ004091AAA; SGPP, st 98.0 1.6E-06 5.4E-11 85.6 2.2 122 466-594 92-235 (254)
281 2o57_A Putative sarcosine dime 98.0 4.7E-06 1.6E-10 84.6 5.7 99 462-572 79-187 (297)
282 4dcm_A Ribosomal RNA large sub 98.0 0.0001 3.6E-09 78.6 16.4 97 469-571 224-333 (375)
283 3ofk_A Nodulation protein S; N 98.0 4.4E-06 1.5E-10 80.6 5.2 102 463-572 47-154 (216)
284 3dli_A Methyltransferase; PSI- 98.0 1.8E-06 6.1E-11 85.1 2.4 93 469-571 43-139 (240)
285 3bxo_A N,N-dimethyltransferase 98.0 5.2E-06 1.8E-10 81.0 5.7 115 448-572 21-141 (239)
286 1dus_A MJ0882; hypothetical pr 98.0 5.3E-06 1.8E-10 77.6 5.4 125 458-594 45-180 (194)
287 2p7i_A Hypothetical protein; p 98.0 2.7E-06 9.2E-11 83.0 3.5 92 470-572 45-141 (250)
288 4e2x_A TCAB9; kijanose, tetron 98.0 1.6E-06 5.6E-11 92.8 2.1 145 441-595 79-251 (416)
289 3bt7_A TRNA (uracil-5-)-methyl 98.0 1.9E-05 6.4E-10 83.8 10.2 92 229-330 214-326 (369)
290 3lcc_A Putative methyl chlorid 98.0 1.7E-05 5.9E-10 77.6 9.1 118 469-595 68-205 (235)
291 3dh0_A SAM dependent methyltra 98.0 1E-05 3.4E-10 78.1 7.3 139 459-612 31-193 (219)
292 2dul_A N(2),N(2)-dimethylguano 98.0 5.6E-06 1.9E-10 88.6 5.8 97 228-330 47-164 (378)
293 1xxl_A YCGJ protein; structura 98.0 6.7E-06 2.3E-10 81.1 5.9 105 456-572 12-124 (239)
294 3fut_A Dimethyladenosine trans 97.9 1.4E-05 4.9E-10 81.7 8.2 82 208-300 34-118 (271)
295 3bus_A REBM, methyltransferase 97.9 5.1E-06 1.8E-10 83.0 4.8 104 457-572 53-166 (273)
296 1jsx_A Glucose-inhibited divis 97.9 1.9E-05 6.3E-10 75.6 8.2 151 444-612 44-205 (207)
297 3eey_A Putative rRNA methylase 97.9 8.8E-06 3E-10 77.4 5.8 143 463-613 20-189 (197)
298 3ou2_A SAM-dependent methyltra 97.9 4.3E-06 1.5E-10 80.2 3.6 95 469-572 48-146 (218)
299 3grz_A L11 mtase, ribosomal pr 97.9 1.2E-05 4.3E-10 77.0 6.8 116 469-595 62-183 (205)
300 3m70_A Tellurite resistance pr 97.9 6.4E-06 2.2E-10 83.3 5.0 116 469-595 122-258 (286)
301 3f4k_A Putative methyltransfer 97.9 7.1E-06 2.4E-10 81.1 4.9 103 457-572 37-150 (257)
302 1xdz_A Methyltransferase GIDB; 97.9 3.1E-05 1.1E-09 76.5 9.6 155 445-612 47-219 (240)
303 3e23_A Uncharacterized protein 97.9 8.2E-06 2.8E-10 78.5 4.9 118 469-595 45-180 (211)
304 3cc8_A Putative methyltransfer 97.9 1.1E-05 3.7E-10 77.7 5.6 97 467-572 32-130 (230)
305 1vl5_A Unknown conserved prote 97.9 8.4E-06 2.9E-10 81.1 4.9 95 467-572 37-140 (260)
306 3l8d_A Methyltransferase; stru 97.9 7.2E-06 2.5E-10 80.2 4.3 116 469-594 55-197 (242)
307 2i62_A Nicotinamide N-methyltr 97.9 2.6E-05 8.8E-10 77.2 8.4 125 467-595 56-237 (265)
308 1l3i_A Precorrin-6Y methyltran 97.9 1.2E-05 4E-10 75.2 5.4 119 461-594 29-157 (192)
309 2efj_A 3,7-dimethylxanthine me 97.9 8.8E-05 3E-09 79.5 12.8 104 229-333 53-228 (384)
310 2yqz_A Hypothetical protein TT 97.9 1.2E-05 4.1E-10 79.5 5.7 94 468-571 40-140 (263)
311 3ujc_A Phosphoethanolamine N-m 97.9 4.7E-06 1.6E-10 82.4 2.6 96 469-572 57-159 (266)
312 3d2l_A SAM-dependent methyltra 97.9 2.4E-05 8.2E-10 76.4 7.6 93 469-570 35-135 (243)
313 3ege_A Putative methyltransfer 97.8 1.4E-05 4.8E-10 80.0 5.8 94 469-572 36-130 (261)
314 2yxd_A Probable cobalt-precorr 97.8 2.1E-05 7.3E-10 72.9 6.6 118 459-595 29-155 (183)
315 3b5i_A S-adenosyl-L-methionine 97.8 2.3E-05 8E-10 83.7 7.8 104 228-332 52-227 (374)
316 3thr_A Glycine N-methyltransfe 97.8 7.1E-06 2.4E-10 83.0 3.6 96 469-572 59-175 (293)
317 4auk_A Ribosomal RNA large sub 97.8 0.00033 1.1E-08 74.5 16.3 142 208-359 191-335 (375)
318 3hm2_A Precorrin-6Y C5,15-meth 97.8 3.9E-05 1.3E-09 71.2 8.2 118 461-593 21-149 (178)
319 3mgg_A Methyltransferase; NYSG 97.8 7.3E-06 2.5E-10 82.2 3.4 94 469-572 39-142 (276)
320 3cgg_A SAM-dependent methyltra 97.8 1.9E-05 6.6E-10 73.8 5.9 136 469-612 48-195 (195)
321 3ccf_A Cyclopropane-fatty-acyl 97.8 1.6E-05 5.3E-10 80.2 5.6 92 469-571 59-153 (279)
322 3kkz_A Uncharacterized protein 97.8 1E-05 3.4E-10 81.0 3.8 93 469-572 48-150 (267)
323 2p35_A Trans-aconitate 2-methy 97.8 1.9E-05 6.7E-10 77.9 5.8 91 469-572 35-132 (259)
324 3hp7_A Hemolysin, putative; st 97.8 2.7E-05 9.3E-10 80.5 7.0 128 469-610 87-247 (291)
325 2ar0_A M.ecoki, type I restric 97.8 1.4E-05 4.8E-10 89.3 5.3 105 228-332 169-314 (541)
326 2gs9_A Hypothetical protein TT 97.8 3.3E-05 1.1E-09 74.1 7.2 93 468-572 37-132 (211)
327 3sm3_A SAM-dependent methyltra 97.8 1.6E-05 5.6E-10 76.9 5.1 98 469-572 32-141 (235)
328 3e05_A Precorrin-6Y C5,15-meth 97.8 4.1E-05 1.4E-09 73.4 7.7 144 436-594 10-165 (204)
329 3njr_A Precorrin-6Y methylase; 97.8 5.4E-05 1.8E-09 73.4 8.4 142 436-594 25-177 (204)
330 1m6e_X S-adenosyl-L-methionnin 97.8 0.0001 3.5E-09 78.3 11.1 103 229-332 52-211 (359)
331 3gu3_A Methyltransferase; alph 97.8 2.5E-05 8.6E-10 79.2 6.1 96 468-574 23-128 (284)
332 3orh_A Guanidinoacetate N-meth 97.7 1.1E-05 3.8E-10 80.1 3.3 100 469-571 62-169 (236)
333 3ftd_A Dimethyladenosine trans 97.7 8.4E-05 2.9E-09 74.8 9.7 82 208-299 18-102 (249)
334 3evz_A Methyltransferase; NYSG 97.7 4.8E-05 1.6E-09 74.1 7.7 138 469-611 57-219 (230)
335 3uzu_A Ribosomal RNA small sub 97.7 1.6E-05 5.6E-10 81.5 4.5 76 208-290 29-106 (279)
336 4htf_A S-adenosylmethionine-de 97.7 1E-05 3.6E-10 81.7 3.0 94 469-572 70-173 (285)
337 1vlm_A SAM-dependent methyltra 97.7 2.8E-05 9.7E-10 75.4 6.0 112 469-594 49-185 (219)
338 2avn_A Ubiquinone/menaquinone 97.7 3E-05 1E-09 77.4 6.3 96 468-572 55-152 (260)
339 4gqb_A Protein arginine N-meth 97.7 0.00014 4.9E-09 82.4 12.4 117 208-327 336-464 (637)
340 2pxx_A Uncharacterized protein 97.7 3.4E-05 1.2E-09 73.6 6.1 137 469-611 44-197 (215)
341 3vc1_A Geranyl diphosphate 2-C 97.7 1.8E-05 6E-10 81.5 4.2 93 468-572 118-221 (312)
342 3jwh_A HEN1; methyltransferase 97.7 2.3E-05 7.8E-10 75.8 4.7 118 448-574 12-143 (217)
343 2r6z_A UPF0341 protein in RSP 97.7 2.2E-05 7.6E-10 79.6 4.8 73 228-303 83-172 (258)
344 3g5l_A Putative S-adenosylmeth 97.7 3.1E-05 1.1E-09 76.5 5.5 96 467-571 44-144 (253)
345 2ex4_A Adrenal gland protein A 97.7 5.9E-05 2E-09 74.2 7.3 121 468-595 80-223 (241)
346 3g5t_A Trans-aconitate 3-methy 97.7 1.9E-05 6.7E-10 80.4 3.8 93 467-570 36-147 (299)
347 1nt2_A Fibrillarin-like PRE-rR 97.7 4.9E-05 1.7E-09 74.3 6.5 100 462-571 54-160 (210)
348 2qy6_A UPF0209 protein YFCK; s 97.7 6.3E-05 2.2E-09 76.3 7.5 121 228-361 60-232 (257)
349 4dzr_A Protein-(glutamine-N5) 97.7 2E-05 6.8E-10 75.1 3.4 161 445-612 12-205 (215)
350 1ej0_A FTSJ; methyltransferase 97.7 9.5E-05 3.3E-09 67.5 7.9 134 463-612 20-178 (180)
351 2aot_A HMT, histamine N-methyl 97.7 1.4E-05 4.7E-10 81.5 2.4 97 468-571 53-171 (292)
352 3q87_B N6 adenine specific DNA 97.6 0.00011 3.6E-09 69.0 8.3 130 470-610 26-160 (170)
353 1m6y_A S-adenosyl-methyltransf 97.6 2E-05 6.9E-10 81.8 3.4 71 227-298 25-104 (301)
354 2g72_A Phenylethanolamine N-me 97.6 8.7E-05 3E-09 75.2 8.0 64 528-594 173-253 (289)
355 3g2m_A PCZA361.24; SAM-depende 97.6 2.2E-05 7.6E-10 80.0 3.5 94 470-572 85-190 (299)
356 3v97_A Ribosomal RNA large sub 97.6 8.6E-05 3E-09 85.5 8.6 104 228-331 190-348 (703)
357 3khk_A Type I restriction-modi 97.6 9.2E-05 3.1E-09 82.8 8.4 103 231-333 247-398 (544)
358 1pjz_A Thiopurine S-methyltran 97.6 7.2E-05 2.5E-09 72.2 6.5 132 454-595 11-174 (203)
359 3g89_A Ribosomal RNA small sub 97.6 9.9E-05 3.4E-09 74.1 7.6 156 445-612 57-229 (249)
360 1wzn_A SAM-dependent methyltra 97.6 3.7E-05 1.3E-09 75.8 4.4 96 468-571 42-144 (252)
361 3bkw_A MLL3908 protein, S-aden 97.6 2.4E-05 8.3E-10 76.3 2.8 95 468-572 44-144 (243)
362 1ve3_A Hypothetical protein PH 97.6 5.1E-05 1.7E-09 73.2 5.1 115 449-573 20-143 (227)
363 2kw5_A SLR1183 protein; struct 97.6 5.5E-05 1.9E-09 72.0 5.0 113 470-594 32-168 (202)
364 3ua3_A Protein arginine N-meth 97.5 0.0001 3.4E-09 84.1 7.5 97 230-327 411-531 (745)
365 3ll7_A Putative methyltransfer 97.5 6E-05 2E-09 81.5 5.4 102 228-332 93-211 (410)
366 3o4f_A Spermidine synthase; am 97.5 0.00037 1.3E-08 72.0 11.1 101 229-331 84-199 (294)
367 3opn_A Putative hemolysin; str 97.5 0.00014 4.8E-09 72.3 7.6 129 469-611 39-201 (232)
368 3lpm_A Putative methyltransfer 97.5 0.00012 4.2E-09 73.1 7.3 124 469-594 51-198 (259)
369 3r0q_C Probable protein argini 97.5 9.4E-05 3.2E-09 78.7 6.6 115 453-571 47-168 (376)
370 1zx0_A Guanidinoacetate N-meth 97.5 3.6E-05 1.2E-09 75.7 3.0 99 469-573 62-171 (236)
371 2plw_A Ribosomal RNA methyltra 97.5 0.00015 5.2E-09 68.8 7.2 135 463-611 20-195 (201)
372 4fsd_A Arsenic methyltransfera 97.5 3.6E-05 1.2E-09 81.9 3.0 93 469-572 85-203 (383)
373 3lkd_A Type I restriction-modi 97.5 0.00025 8.5E-09 79.3 9.9 123 208-333 204-361 (542)
374 3m33_A Uncharacterized protein 97.5 6.4E-05 2.2E-09 73.5 4.5 108 469-591 50-161 (226)
375 3dtn_A Putative methyltransfer 97.5 6E-05 2E-09 73.5 4.3 95 469-572 46-148 (234)
376 3gcz_A Polyprotein; flavivirus 97.5 3.7E-05 1.3E-09 78.7 2.5 105 225-330 87-201 (282)
377 3s1s_A Restriction endonucleas 97.5 0.00018 6E-09 83.3 8.3 107 227-333 320-468 (878)
378 2frn_A Hypothetical protein PH 97.5 0.00011 3.9E-09 74.6 6.1 112 469-594 127-254 (278)
379 4fzv_A Putative methyltransfer 97.4 0.00037 1.3E-08 74.0 10.1 112 225-337 145-291 (359)
380 3fpf_A Mtnas, putative unchara 97.4 8.2E-05 2.8E-09 77.1 4.9 145 450-612 107-264 (298)
381 3duw_A OMT, O-methyltransferas 97.4 7.8E-05 2.7E-09 72.3 4.4 131 469-612 60-222 (223)
382 2b3t_A Protein methyltransfera 97.4 0.00011 3.8E-09 74.2 5.7 136 469-611 111-275 (276)
383 1qyr_A KSGA, high level kasuga 97.4 6.3E-05 2.1E-09 76.0 3.5 71 227-300 20-98 (252)
384 2p8j_A S-adenosylmethionine-de 97.4 5.7E-05 1.9E-09 72.1 3.0 96 469-572 25-128 (209)
385 3u81_A Catechol O-methyltransf 97.4 7.2E-05 2.5E-09 72.8 3.8 132 468-612 59-213 (221)
386 3ntv_A MW1564 protein; rossman 97.4 0.00019 6.6E-09 70.6 6.5 126 469-612 73-231 (232)
387 2bm8_A Cephalosporin hydroxyla 97.4 0.00014 4.7E-09 72.3 5.4 112 469-591 83-213 (236)
388 3dp7_A SAM-dependent methyltra 97.4 5.6E-05 1.9E-09 79.7 2.7 97 467-572 179-287 (363)
389 3q7e_A Protein arginine N-meth 97.4 0.00011 3.7E-09 77.4 4.8 99 469-571 68-172 (349)
390 2nxc_A L11 mtase, ribosomal pr 97.4 9.4E-05 3.2E-09 74.2 4.0 113 469-595 122-242 (254)
391 2oyr_A UPF0341 protein YHIQ; a 97.4 8.7E-05 3E-09 75.4 3.6 90 230-324 90-194 (258)
392 1qzz_A RDMB, aclacinomycin-10- 97.4 0.00016 5.5E-09 75.9 5.8 138 465-612 180-356 (374)
393 3ggd_A SAM-dependent methyltra 97.3 4.7E-05 1.6E-09 74.9 1.4 97 469-572 58-163 (245)
394 1ri5_A MRNA capping enzyme; me 97.3 5.1E-05 1.7E-09 76.4 1.7 100 469-573 66-175 (298)
395 4gek_A TRNA (CMO5U34)-methyltr 97.3 4.3E-05 1.5E-09 77.4 1.1 101 463-572 68-178 (261)
396 3tfw_A Putative O-methyltransf 97.3 0.00032 1.1E-08 69.8 7.2 131 469-612 65-225 (248)
397 3bkx_A SAM-dependent methyltra 97.3 0.00025 8.5E-09 70.7 6.4 102 463-572 41-159 (275)
398 1vbf_A 231AA long hypothetical 97.3 8.1E-05 2.8E-09 72.5 2.7 101 455-573 60-166 (231)
399 3iv6_A Putative Zn-dependent a 97.3 6.7E-05 2.3E-09 76.3 2.1 108 454-571 34-147 (261)
400 3i53_A O-methyltransferase; CO 97.3 0.00016 5.4E-09 74.9 5.0 135 463-611 165-331 (332)
401 1yzh_A TRNA (guanine-N(7)-)-me 97.3 0.00017 5.9E-09 69.7 4.8 122 469-594 43-179 (214)
402 3bgv_A MRNA CAP guanine-N7 met 97.3 8.4E-05 2.9E-09 76.3 2.6 102 468-573 35-156 (313)
403 3g07_A 7SK snRNA methylphospha 97.3 4E-05 1.4E-09 78.4 0.1 46 527-572 175-220 (292)
404 1x19_A CRTF-related protein; m 97.2 0.00027 9.4E-09 74.0 6.1 98 463-572 186-295 (359)
405 3tr6_A O-methyltransferase; ce 97.2 0.00014 4.6E-09 70.6 3.5 126 469-612 66-224 (225)
406 1g6q_1 HnRNP arginine N-methyl 97.2 0.00016 5.5E-09 75.4 4.0 95 469-570 40-143 (328)
407 2ip2_A Probable phenazine-spec 97.2 0.00032 1.1E-08 72.5 6.2 133 463-611 164-333 (334)
408 2a14_A Indolethylamine N-methy 97.2 0.00014 4.7E-09 73.1 3.2 43 528-572 155-197 (263)
409 2ipx_A RRNA 2'-O-methyltransfe 97.2 0.00023 7.7E-09 69.8 4.7 133 469-611 79-231 (233)
410 3cvo_A Methyltransferase-like 97.2 0.0017 5.9E-08 63.5 10.8 119 230-370 32-182 (202)
411 2gb4_A Thiopurine S-methyltran 97.2 0.00016 5.6E-09 72.7 3.6 119 469-595 70-225 (252)
412 2vdw_A Vaccinia virus capping 97.2 0.0002 6.9E-09 74.0 4.3 100 469-573 50-170 (302)
413 3eld_A Methyltransferase; flav 97.2 0.00045 1.5E-08 71.2 6.6 101 227-330 80-191 (300)
414 3c6k_A Spermine synthase; sper 97.2 0.00072 2.5E-08 72.2 8.5 100 228-330 205-331 (381)
415 3lst_A CALO1 methyltransferase 97.2 0.00018 6.3E-09 75.2 3.8 99 463-572 180-286 (348)
416 2r3s_A Uncharacterized protein 97.2 0.00042 1.4E-08 71.3 6.4 135 466-612 164-335 (335)
417 1tw3_A COMT, carminomycin 4-O- 97.2 0.00057 1.9E-08 71.4 7.4 139 464-612 180-356 (360)
418 3gwz_A MMCR; methyltransferase 97.1 0.00052 1.8E-08 72.4 7.0 136 463-612 198-369 (369)
419 3mcz_A O-methyltransferase; ad 97.1 0.00022 7.6E-09 74.2 4.1 138 463-612 174-349 (352)
420 1g8a_A Fibrillarin-like PRE-rR 97.1 0.00028 9.6E-09 68.6 4.5 133 463-612 71-227 (227)
421 3p9n_A Possible methyltransfer 97.1 0.00018 6.2E-09 68.0 2.7 122 443-573 22-154 (189)
422 3mb5_A SAM-dependent methyltra 97.1 0.00097 3.3E-08 65.8 8.0 112 459-588 87-211 (255)
423 3dou_A Ribosomal RNA large sub 97.1 0.0019 6.6E-08 61.9 9.9 132 469-611 27-180 (191)
424 3r3h_A O-methyltransferase, SA 97.1 0.00077 2.6E-08 67.1 7.3 130 468-612 61-220 (242)
425 2y1w_A Histone-arginine methyl 97.1 0.00072 2.5E-08 71.0 7.3 95 469-571 52-154 (348)
426 2yvl_A TRMI protein, hypotheti 97.1 0.001 3.5E-08 65.1 7.9 117 455-590 81-208 (248)
427 2oxt_A Nucleoside-2'-O-methylt 97.1 0.00047 1.6E-08 70.0 5.4 133 469-610 76-226 (265)
428 2fca_A TRNA (guanine-N(7)-)-me 97.0 0.00046 1.6E-08 67.1 5.0 119 469-592 40-174 (213)
429 3dxy_A TRNA (guanine-N(7)-)-me 97.0 0.00022 7.5E-09 70.0 2.6 115 468-585 35-164 (218)
430 3lbf_A Protein-L-isoaspartate 97.0 0.00027 9.2E-09 67.7 3.1 100 457-574 69-176 (210)
431 2pwy_A TRNA (adenine-N(1)-)-me 97.0 0.00087 3E-08 66.0 6.8 115 458-590 89-217 (258)
432 1fbn_A MJ fibrillarin homologu 97.0 0.00051 1.7E-08 67.3 5.0 131 469-612 76-228 (230)
433 2fyt_A Protein arginine N-meth 97.0 0.00053 1.8E-08 71.9 5.2 94 469-569 66-168 (340)
434 2esr_A Methyltransferase; stru 97.0 6.5E-05 2.2E-09 70.1 -1.7 97 469-574 33-140 (177)
435 3c3p_A Methyltransferase; NP_9 97.0 0.00037 1.3E-08 67.0 3.6 91 469-572 58-160 (210)
436 2p41_A Type II methyltransfera 97.0 0.00047 1.6E-08 71.4 4.5 97 469-571 84-190 (305)
437 2vdv_E TRNA (guanine-N(7)-)-me 96.9 0.00035 1.2E-08 69.3 3.2 116 469-589 51-191 (246)
438 3id6_C Fibrillarin-like rRNA/T 96.9 0.00056 1.9E-08 68.3 4.7 98 463-571 74-180 (232)
439 2k4m_A TR8_protein, UPF0146 pr 96.9 0.00056 1.9E-08 63.7 4.3 97 208-329 20-120 (153)
440 3cbg_A O-methyltransferase; cy 96.9 0.00034 1.2E-08 68.9 2.2 125 469-612 74-232 (232)
441 1i1n_A Protein-L-isoaspartate 96.8 0.00034 1.2E-08 67.9 2.1 98 457-572 67-182 (226)
442 1yb2_A Hypothetical protein TA 96.8 0.0017 5.9E-08 65.4 7.3 112 462-591 107-231 (275)
443 1p91_A Ribosomal RNA large sub 96.8 0.00071 2.4E-08 67.4 4.1 87 469-572 87-178 (269)
444 2ozv_A Hypothetical protein AT 96.8 0.0026 8.8E-08 63.8 7.9 121 468-591 37-188 (260)
445 1o54_A SAM-dependent O-methylt 96.7 0.0018 6.2E-08 65.1 6.7 115 458-590 105-232 (277)
446 1ws6_A Methyltransferase; stru 96.7 0.00015 5.2E-09 66.5 -1.2 94 469-573 43-148 (171)
447 2ld4_A Anamorsin; methyltransf 96.7 0.00085 2.9E-08 62.5 3.9 58 527-589 61-128 (176)
448 3ckk_A TRNA (guanine-N(7)-)-me 96.7 0.001 3.5E-08 66.0 4.6 119 469-592 48-190 (235)
449 2gpy_A O-methyltransferase; st 96.7 0.00053 1.8E-08 67.0 2.4 92 469-572 56-160 (233)
450 3sso_A Methyltransferase; macr 96.7 0.00016 5.5E-09 77.8 -1.6 122 455-591 204-361 (419)
451 3p2e_A 16S rRNA methylase; met 96.7 0.00079 2.7E-08 66.3 3.2 98 469-570 26-137 (225)
452 2wa2_A Non-structural protein 96.6 0.0017 5.7E-08 66.4 5.5 95 469-571 84-192 (276)
453 2b25_A Hypothetical protein; s 96.6 0.0024 8.3E-08 66.2 6.7 97 460-572 100-219 (336)
454 2hnk_A SAM-dependent O-methylt 96.6 0.00092 3.2E-08 65.7 3.3 125 469-613 62-232 (239)
455 2yxe_A Protein-L-isoaspartate 96.6 0.00071 2.4E-08 65.0 2.4 99 456-574 68-179 (215)
456 3dr5_A Putative O-methyltransf 96.6 0.001 3.5E-08 65.4 3.5 127 470-613 59-214 (221)
457 2ift_A Putative methylase HI07 96.6 0.00064 2.2E-08 65.4 1.9 126 469-612 55-194 (201)
458 3htx_A HEN1; HEN1, small RNA m 96.6 0.0055 1.9E-07 71.3 9.8 113 450-572 706-834 (950)
459 3gdh_A Trimethylguanosine synt 96.6 0.00012 4E-09 71.9 -3.5 93 469-572 80-181 (241)
460 2nyu_A Putative ribosomal RNA 96.5 0.0024 8.1E-08 60.1 5.5 98 463-572 20-145 (196)
461 1jg1_A PIMT;, protein-L-isoasp 96.5 0.001 3.4E-08 65.3 2.5 98 457-573 83-190 (235)
462 3reo_A (ISO)eugenol O-methyltr 96.4 0.0017 5.7E-08 68.7 4.0 95 465-572 201-300 (368)
463 1fp1_D Isoliquiritigenin 2'-O- 96.4 0.0013 4.5E-08 69.3 3.2 97 465-572 207-306 (372)
464 1r18_A Protein-L-isoaspartate( 96.4 0.00037 1.3E-08 68.0 -1.1 91 463-572 82-194 (227)
465 1i9g_A Hypothetical protein RV 96.4 0.0037 1.3E-07 62.5 6.3 109 458-584 92-216 (280)
466 2igt_A SAM dependent methyltra 96.4 0.0024 8.1E-08 66.9 5.0 118 469-592 155-299 (332)
467 2avd_A Catechol-O-methyltransf 96.4 0.0021 7.3E-08 62.2 4.3 125 469-612 71-229 (229)
468 3a27_A TYW2, uncharacterized p 96.4 0.0019 6.4E-08 65.4 3.9 113 463-593 117-247 (272)
469 3c3y_A Pfomt, O-methyltransfer 96.3 0.0015 5.2E-08 64.6 2.7 127 468-613 71-237 (237)
470 3mq2_A 16S rRNA methyltransfer 96.3 0.0031 1E-07 60.7 4.8 120 469-594 29-181 (218)
471 1mjf_A Spermidine synthase; sp 96.3 0.0039 1.3E-07 63.4 5.7 138 469-612 77-239 (281)
472 3p9c_A Caffeic acid O-methyltr 96.3 0.0023 7.8E-08 67.5 4.0 95 465-572 199-298 (364)
473 2pbf_A Protein-L-isoaspartate 96.3 0.00052 1.8E-08 66.6 -0.9 93 463-572 78-193 (227)
474 1dl5_A Protein-L-isoaspartate 96.2 0.00098 3.3E-08 68.8 0.9 101 455-574 65-177 (317)
475 2fhp_A Methylase, putative; al 96.2 0.00084 2.9E-08 62.5 0.3 96 469-573 46-155 (187)
476 1iy9_A Spermidine synthase; ro 96.2 0.0072 2.5E-07 61.3 7.2 144 467-613 75-237 (275)
477 2px2_A Genome polyprotein [con 96.2 0.0039 1.3E-07 63.1 5.0 102 225-330 70-183 (269)
478 1nv8_A HEMK protein; class I a 96.2 0.0026 8.9E-08 64.9 3.9 151 445-612 106-282 (284)
479 2pjd_A Ribosomal RNA small sub 96.2 0.00062 2.1E-08 71.2 -0.9 97 469-572 198-303 (343)
480 1sui_A Caffeoyl-COA O-methyltr 96.2 0.003 1E-07 63.0 4.1 93 469-572 81-190 (247)
481 4df3_A Fibrillarin-like rRNA/T 96.2 0.0052 1.8E-07 61.4 5.7 101 461-571 73-181 (233)
482 3adn_A Spermidine synthase; am 96.1 0.015 5.1E-07 59.8 8.9 144 467-613 83-246 (294)
483 3b3j_A Histone-arginine methyl 96.1 0.0027 9.4E-08 69.8 3.4 93 469-570 160-261 (480)
484 2xyq_A Putative 2'-O-methyl tr 96.0 0.011 3.8E-07 60.8 7.7 134 462-611 60-210 (290)
485 2fpo_A Methylase YHHF; structu 96.0 0.002 6.8E-08 62.0 1.9 97 469-574 56-162 (202)
486 4hc4_A Protein arginine N-meth 96.0 0.0069 2.4E-07 64.6 6.2 114 451-571 65-188 (376)
487 1inl_A Spermidine synthase; be 96.0 0.0046 1.6E-07 63.5 4.5 142 469-613 92-253 (296)
488 3bwc_A Spermidine synthase; SA 96.0 0.0076 2.6E-07 62.0 6.2 141 468-612 96-258 (304)
489 2wk1_A NOVP; transferase, O-me 96.0 0.07 2.4E-06 54.7 13.2 88 275-371 190-281 (282)
490 1ixk_A Methyltransferase; open 95.9 0.007 2.4E-07 62.6 5.5 105 461-571 114-245 (315)
491 1fp2_A Isoflavone O-methyltran 95.9 0.0018 6.1E-08 67.6 1.0 93 467-572 188-288 (352)
492 1xj5_A Spermidine synthase 1; 95.9 0.0079 2.7E-07 63.1 5.8 101 467-571 120-234 (334)
493 2qe6_A Uncharacterized protein 95.8 0.009 3.1E-07 60.5 5.9 101 466-573 76-197 (274)
494 1o9g_A RRNA methyltransferase; 95.8 0.0024 8.2E-08 63.1 1.2 47 528-574 167-216 (250)
495 3lkz_A Non-structural protein 95.8 0.089 3.1E-06 54.2 12.7 125 226-360 92-229 (321)
496 3tma_A Methyltransferase; thum 95.7 0.011 3.9E-07 61.7 6.4 133 469-611 205-353 (354)
497 2vz8_A Fatty acid synthase; tr 95.7 0.0018 6.2E-08 84.0 0.2 103 228-331 1240-1349(2512)
498 1wy7_A Hypothetical protein PH 95.6 0.034 1.1E-06 52.7 8.7 115 469-594 51-172 (207)
499 3bzb_A Uncharacterized protein 95.6 0.0032 1.1E-07 63.9 1.5 94 469-570 81-203 (281)
500 2pt6_A Spermidine synthase; tr 95.5 0.0086 2.9E-07 62.3 4.5 141 469-613 118-278 (321)
No 1
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.63 E-value=2e-15 Score=148.58 Aligned_cols=130 Identities=15% Similarity=0.102 Sum_probs=105.5
Q ss_pred CCCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHhCC-CcEEEEecCCCCCCCCCCeeEEEecccccccc
Q 039518 228 GVFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALERGI-GAMISALSTKQLPYPSSSFEMVHCSRCRVDWH 306 (617)
Q Consensus 228 ~g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~erg~-~~~~~~~d~~~Lpf~d~sFDlV~~s~~l~h~~ 306 (617)
++.+|||||||+|.++..+++.+. .++++|+++.+++.|+++.. ++.+..+|++.+ +++++||+|++..+++|+.
T Consensus 42 ~~~~vLDiGcG~G~~~~~l~~~~~---~v~gvD~s~~~~~~a~~~~~~~v~~~~~d~~~~-~~~~~fD~v~~~~~l~~~~ 117 (250)
T 2p7i_A 42 RPGNLLELGSFKGDFTSRLQEHFN---DITCVEASEEAISHAQGRLKDGITYIHSRFEDA-QLPRRYDNIVLTHVLEHID 117 (250)
T ss_dssp CSSCEEEESCTTSHHHHHHTTTCS---CEEEEESCHHHHHHHHHHSCSCEEEEESCGGGC-CCSSCEEEEEEESCGGGCS
T ss_pred CCCcEEEECCCCCHHHHHHHHhCC---cEEEEeCCHHHHHHHHHhhhCCeEEEEccHHHc-CcCCcccEEEEhhHHHhhc
Confidence 445699999999999999998876 57788999999999998865 688888888887 4688999999999888876
Q ss_pred cchHHHHHHHH-HhccCCeEEEEEeCCCCCC------------CC----------C--ChhhHHHHHHHHHHcCceEEEE
Q 039518 307 ANDGILLKEVD-RVLRPNGYFVYSAPPAYRK------------DK----------D--YPLIWDKLVNLTTAMCWKLIAR 361 (617)
Q Consensus 307 ~d~~~~L~el~-RvLrPGG~Liis~p~~~~~------------~~----------~--~~~~W~~le~La~~~gw~~v~~ 361 (617)
++..+|+++. |+|||||++++++|..... .. . ....-+++.+++++.||+++..
T Consensus 118 -~~~~~l~~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~ 196 (250)
T 2p7i_A 118 -DPVALLKRINDDWLAEGGRLFLVCPNANAVSRQIAVKMGIISHNSAVTEAEFAHGHRCTYALDTLERDASRAGLQVTYR 196 (250)
T ss_dssp -SHHHHHHHHHHTTEEEEEEEEEEEECTTCHHHHHHHHTTSSSSTTCCCHHHHHTTCCCCCCHHHHHHHHHHTTCEEEEE
T ss_pred -CHHHHHHHHHHHhcCCCCEEEEEcCChHHHHHHHHHHcCccccchhcccccccccccccCCHHHHHHHHHHCCCeEEEE
Confidence 8899999999 9999999999998754210 00 0 0112345889999999999875
Q ss_pred e
Q 039518 362 K 362 (617)
Q Consensus 362 ~ 362 (617)
.
T Consensus 197 ~ 197 (250)
T 2p7i_A 197 S 197 (250)
T ss_dssp E
T ss_pred e
Confidence 4
No 2
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.62 E-value=3.6e-16 Score=159.19 Aligned_cols=97 Identities=23% Similarity=0.280 Sum_probs=85.5
Q ss_pred CCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHhCCCcEEEEecCCCCCCCCCCeeEEEecccccccccc
Q 039518 229 VFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALERGIGAMISALSTKQLPYPSSSFEMVHCSRCRVDWHAN 308 (617)
Q Consensus 229 g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~erg~~~~~~~~d~~~Lpf~d~sFDlV~~s~~l~h~~~d 308 (617)
+.+|||||||+|.++..|++++. .++++|+|+.|++.|+++ .++.+.+++++++|+++++||+|+|+.++ ||. +
T Consensus 40 ~~~vLDvGcGtG~~~~~l~~~~~---~v~gvD~s~~ml~~a~~~-~~v~~~~~~~e~~~~~~~sfD~v~~~~~~-h~~-~ 113 (257)
T 4hg2_A 40 RGDALDCGCGSGQASLGLAEFFE---RVHAVDPGEAQIRQALRH-PRVTYAVAPAEDTGLPPASVDVAIAAQAM-HWF-D 113 (257)
T ss_dssp SSEEEEESCTTTTTHHHHHTTCS---EEEEEESCHHHHHTCCCC-TTEEEEECCTTCCCCCSSCEEEEEECSCC-TTC-C
T ss_pred CCCEEEEcCCCCHHHHHHHHhCC---EEEEEeCcHHhhhhhhhc-CCceeehhhhhhhcccCCcccEEEEeeeh-hHh-h
Confidence 35699999999999999999875 577889999999988653 46889999999999999999999999876 666 6
Q ss_pred hHHHHHHHHHhccCCeEEEEEeC
Q 039518 309 DGILLKEVDRVLRPNGYFVYSAP 331 (617)
Q Consensus 309 ~~~~L~el~RvLrPGG~Liis~p 331 (617)
+..++.|+.|+|||||.|++...
T Consensus 114 ~~~~~~e~~rvLkpgG~l~~~~~ 136 (257)
T 4hg2_A 114 LDRFWAELRRVARPGAVFAAVTY 136 (257)
T ss_dssp HHHHHHHHHHHEEEEEEEEEEEE
T ss_pred HHHHHHHHHHHcCCCCEEEEEEC
Confidence 88999999999999999998764
No 3
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.61 E-value=7.3e-15 Score=147.34 Aligned_cols=133 Identities=18% Similarity=0.238 Sum_probs=104.2
Q ss_pred CCCCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHh----C-CCcEEEEecCCCCCCCCCCeeEEEeccc
Q 039518 227 AGVFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALER----G-IGAMISALSTKQLPYPSSSFEMVHCSRC 301 (617)
Q Consensus 227 ~~g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~er----g-~~~~~~~~d~~~Lpf~d~sFDlV~~s~~ 301 (617)
.++.+|||||||+|.++..|++++. .++++|+++.+++.|+++ + .++.+..+|++.+|+++++||+|+++.+
T Consensus 36 ~~~~~vLDiGcG~G~~~~~l~~~~~---~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~l~~~~~~fD~V~~~~~ 112 (260)
T 1vl5_A 36 KGNEEVLDVATGGGHVANAFAPFVK---KVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAEQMPFTDERFHIVTCRIA 112 (260)
T ss_dssp CSCCEEEEETCTTCHHHHHHGGGSS---EEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC-CCCSCTTCEEEEEEESC
T ss_pred CCCCEEEEEeCCCCHHHHHHHHhCC---EEEEEeCCHHHHHHHHHHHHhcCCCceEEEEecHHhCCCCCCCEEEEEEhhh
Confidence 3566799999999999999998864 788889999999998876 3 3478899999999999999999999988
Q ss_pred ccccccchHHHHHHHHHhccCCeEEEEEeCCCCCC----------------CCCChhhHHHHHHHHHHcCceEEEEee
Q 039518 302 RVDWHANDGILLKEVDRVLRPNGYFVYSAPPAYRK----------------DKDYPLIWDKLVNLTTAMCWKLIARKI 363 (617)
Q Consensus 302 l~h~~~d~~~~L~el~RvLrPGG~Liis~p~~~~~----------------~~~~~~~W~~le~La~~~gw~~v~~~~ 363 (617)
++|+. ++..+|.++.|+|||||+++++++..... ..........+.+++++.||+.+....
T Consensus 113 l~~~~-d~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~ 189 (260)
T 1vl5_A 113 AHHFP-NPASFVSEAYRVLKKGGQLLLVDNSAPENDAFDVFYNYVEKERDYSHHRAWKKSDWLKMLEEAGFELEELHC 189 (260)
T ss_dssp GGGCS-CHHHHHHHHHHHEEEEEEEEEEEEEBCSSHHHHHHHHHHHHHHCTTCCCCCBHHHHHHHHHHHTCEEEEEEE
T ss_pred hHhcC-CHHHHHHHHHHHcCCCCEEEEEEcCCCCCHHHHHHHHHHHHhcCccccCCCCHHHHHHHHHHCCCeEEEEEE
Confidence 88776 89999999999999999999975421110 000011134578888999999776443
No 4
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.61 E-value=3.9e-15 Score=143.42 Aligned_cols=131 Identities=11% Similarity=0.085 Sum_probs=108.9
Q ss_pred CeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHhCCCcEEEEecCCCCCCCCCCeeEEEecccccccc-cc
Q 039518 230 FQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALERGIGAMISALSTKQLPYPSSSFEMVHCSRCRVDWH-AN 308 (617)
Q Consensus 230 ~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~erg~~~~~~~~d~~~Lpf~d~sFDlV~~s~~l~h~~-~d 308 (617)
.+|||+|||+|.++..|++++. .++++|+++.+++.|+++..++.+..+|+..+++++++||+|+++.+++|+. ++
T Consensus 43 ~~vLDiGcG~G~~~~~l~~~~~---~v~gvD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~ 119 (203)
T 3h2b_A 43 GVILDVGSGTGRWTGHLASLGH---QIEGLEPATRLVELARQTHPSVTFHHGTITDLSDSPKRWAGLLAWYSLIHMGPGE 119 (203)
T ss_dssp SCEEEETCTTCHHHHHHHHTTC---CEEEECCCHHHHHHHHHHCTTSEEECCCGGGGGGSCCCEEEEEEESSSTTCCTTT
T ss_pred CeEEEecCCCCHHHHHHHhcCC---eEEEEeCCHHHHHHHHHhCCCCeEEeCcccccccCCCCeEEEEehhhHhcCCHHH
Confidence 4599999999999999999865 5778899999999999998889999999999999899999999999888876 57
Q ss_pred hHHHHHHHHHhccCCeEEEEEeCCCCCCC-------CCChhhHHHHHHHHHHcCceEEEEee
Q 039518 309 DGILLKEVDRVLRPNGYFVYSAPPAYRKD-------KDYPLIWDKLVNLTTAMCWKLIARKI 363 (617)
Q Consensus 309 ~~~~L~el~RvLrPGG~Liis~p~~~~~~-------~~~~~~W~~le~La~~~gw~~v~~~~ 363 (617)
+..+|+++.++|+|||+++++.+...... .......+++.+++++.||+++....
T Consensus 120 ~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~ 181 (203)
T 3h2b_A 120 LPDALVALRMAVEDGGGLLMSFFSGPSLEPMYHPVATAYRWPLPELAQALETAGFQVTSSHW 181 (203)
T ss_dssp HHHHHHHHHHTEEEEEEEEEEEECCSSCEEECCSSSCEEECCHHHHHHHHHHTTEEEEEEEE
T ss_pred HHHHHHHHHHHcCCCcEEEEEEccCCchhhhhchhhhhccCCHHHHHHHHHHCCCcEEEEEe
Confidence 89999999999999999999975432210 00111245699999999999988543
No 5
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.61 E-value=3.4e-15 Score=147.31 Aligned_cols=130 Identities=22% Similarity=0.194 Sum_probs=105.8
Q ss_pred CCCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHh--CCCcEEEEecCCCCCCCCCCeeEEEeccccccc
Q 039518 228 GVFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALER--GIGAMISALSTKQLPYPSSSFEMVHCSRCRVDW 305 (617)
Q Consensus 228 ~g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~er--g~~~~~~~~d~~~Lpf~d~sFDlV~~s~~l~h~ 305 (617)
++.+|||||||+|.++..+++++. .++++|+++.+++.|+++ ..++.+..+|+..+++++++||+|++..+++|+
T Consensus 53 ~~~~vLDiG~G~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~ 129 (242)
T 3l8d_A 53 KEAEVLDVGCGDGYGTYKLSRTGY---KAVGVDISEVMIQKGKERGEGPDLSFIKGDLSSLPFENEQFEAIMAINSLEWT 129 (242)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTC---EEEEEESCHHHHHHHHTTTCBTTEEEEECBTTBCSSCTTCEEEEEEESCTTSS
T ss_pred CCCeEEEEcCCCCHHHHHHHHcCC---eEEEEECCHHHHHHHHhhcccCCceEEEcchhcCCCCCCCccEEEEcChHhhc
Confidence 455799999999999999999865 677889999999999987 446788899999999999999999999988877
Q ss_pred ccchHHHHHHHHHhccCCeEEEEEeCCCCCCCC-------------CChhhHHHHHHHHHHcCceEEEE
Q 039518 306 HANDGILLKEVDRVLRPNGYFVYSAPPAYRKDK-------------DYPLIWDKLVNLTTAMCWKLIAR 361 (617)
Q Consensus 306 ~~d~~~~L~el~RvLrPGG~Liis~p~~~~~~~-------------~~~~~W~~le~La~~~gw~~v~~ 361 (617)
. ++..++.++.++|+|||+++++++....... .....-..+.+++++.||+++..
T Consensus 130 ~-~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~ 197 (242)
T 3l8d_A 130 E-EPLRALNEIKRVLKSDGYACIAILGPTAKPRENSYPRLYGKDVVCNTMMPWEFEQLVKEQGFKVVDG 197 (242)
T ss_dssp S-CHHHHHHHHHHHEEEEEEEEEEEECTTCGGGGGGGGGGGTCCCSSCCCCHHHHHHHHHHTTEEEEEE
T ss_pred c-CHHHHHHHHHHHhCCCeEEEEEEcCCcchhhhhhhhhhccccccccCCCHHHHHHHHHHcCCEEEEe
Confidence 5 8999999999999999999998743221110 00011245889999999999874
No 6
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.59 E-value=1.7e-15 Score=147.77 Aligned_cols=131 Identities=8% Similarity=0.007 Sum_probs=98.0
Q ss_pred CCCCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHh-----------------CCCcEEEEecCCCCCCC
Q 039518 227 AGVFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALER-----------------GIGAMISALSTKQLPYP 289 (617)
Q Consensus 227 ~~g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~er-----------------g~~~~~~~~d~~~Lpf~ 289 (617)
.++.+|||+|||+|..+..|++++. .++++|+|+.|++.|+++ ..++.+.++|+.+++++
T Consensus 21 ~~~~~vLD~GCG~G~~~~~la~~g~---~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~l~~~ 97 (203)
T 1pjz_A 21 VPGARVLVPLCGKSQDMSWLSGQGY---HVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALTAR 97 (203)
T ss_dssp CTTCEEEETTTCCSHHHHHHHHHCC---EEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSSTHH
T ss_pred CCCCEEEEeCCCCcHhHHHHHHCCC---eEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECccccCCcc
Confidence 4566899999999999999999875 678889999999999886 24678999999999977
Q ss_pred C-CCeeEEEecccccccc-cchHHHHHHHHHhccCCeEEEEEeCCCCC---CCCCChhhHHHHHHHHHHcCceEEEE
Q 039518 290 S-SSFEMVHCSRCRVDWH-ANDGILLKEVDRVLRPNGYFVYSAPPAYR---KDKDYPLIWDKLVNLTTAMCWKLIAR 361 (617)
Q Consensus 290 d-~sFDlV~~s~~l~h~~-~d~~~~L~el~RvLrPGG~Liis~p~~~~---~~~~~~~~W~~le~La~~~gw~~v~~ 361 (617)
+ ++||+|++..+++++. ++...+++++.|+|||||++++.+..... ..+.....-+++.++++. ||+++..
T Consensus 98 ~~~~fD~v~~~~~l~~l~~~~~~~~l~~~~r~LkpgG~~~l~~~~~~~~~~~~~~~~~~~~el~~~~~~-gf~i~~~ 173 (203)
T 1pjz_A 98 DIGHCAAFYDRAAMIALPADMRERYVQHLEALMPQACSGLLITLEYDQALLEGPPFSVPQTWLHRVMSG-NWEVTKV 173 (203)
T ss_dssp HHHSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSEEEEEEEEESSCSSSSSSCCCCCCHHHHHHTSCS-SEEEEEE
T ss_pred cCCCEEEEEECcchhhCCHHHHHHHHHHHHHHcCCCcEEEEEEEecCccccCCCCCCCCHHHHHHHhcC-CcEEEEe
Confidence 5 7999999988777766 23567999999999999985444321111 111111123457777776 8887653
No 7
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.59 E-value=1.9e-15 Score=150.23 Aligned_cols=134 Identities=13% Similarity=0.145 Sum_probs=106.6
Q ss_pred CCCCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHhC---CCcEEEEecCCCCCCCCCCeeEEEeccccc
Q 039518 227 AGVFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALERG---IGAMISALSTKQLPYPSSSFEMVHCSRCRV 303 (617)
Q Consensus 227 ~~g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~erg---~~~~~~~~d~~~Lpf~d~sFDlV~~s~~l~ 303 (617)
.++.+|||||||+|.++..|++++. ..++++|+++.+++.|+++. .++.+..+|+..+++++++||+|+++.+++
T Consensus 92 ~~~~~vLDiG~G~G~~~~~l~~~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~ 169 (254)
T 1xtp_A 92 HGTSRALDCGAGIGRITKNLLTKLY--ATTDLLEPVKHMLEEAKRELAGMPVGKFILASMETATLPPNTYDLIVIQWTAI 169 (254)
T ss_dssp CCCSEEEEETCTTTHHHHHTHHHHC--SEEEEEESCHHHHHHHHHHTTTSSEEEEEESCGGGCCCCSSCEEEEEEESCGG
T ss_pred cCCCEEEEECCCcCHHHHHHHHhhc--CEEEEEeCCHHHHHHHHHHhccCCceEEEEccHHHCCCCCCCeEEEEEcchhh
Confidence 4567899999999999999988753 26788999999999999885 357888889988999889999999999888
Q ss_pred ccc-cchHHHHHHHHHhccCCeEEEEEeCCCCCCC-------CCChhhHHHHHHHHHHcCceEEEEe
Q 039518 304 DWH-ANDGILLKEVDRVLRPNGYFVYSAPPAYRKD-------KDYPLIWDKLVNLTTAMCWKLIARK 362 (617)
Q Consensus 304 h~~-~d~~~~L~el~RvLrPGG~Liis~p~~~~~~-------~~~~~~W~~le~La~~~gw~~v~~~ 362 (617)
|+. +++..+|.++.++|||||+++++++...... ......-+.+.+++++.||+++...
T Consensus 170 ~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~ 236 (254)
T 1xtp_A 170 YLTDADFVKFFKHCQQALTPNGYIFFKENCSTGDRFLVDKEDSSLTRSDIHYKRLFNESGVRVVKEA 236 (254)
T ss_dssp GSCHHHHHHHHHHHHHHEEEEEEEEEEEEBC--CCEEEETTTTEEEBCHHHHHHHHHHHTCCEEEEE
T ss_pred hCCHHHHHHHHHHHHHhcCCCeEEEEEecCCCcccceecccCCcccCCHHHHHHHHHHCCCEEEEee
Confidence 875 3578999999999999999999885221110 0111123568899999999988753
No 8
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.58 E-value=1.5e-14 Score=144.26 Aligned_cols=135 Identities=18% Similarity=0.222 Sum_probs=108.2
Q ss_pred ccCCCCeEEEECCCCcHHHHHhccC-CCcEEEeeecCCcHHHHHHHHHhC---CCcEEEEecCCCCCCCCCCeeEEEecc
Q 039518 225 RSAGVFQVLDVGCGVASFSAFLLPL-DIQTMSFAPKDGHENQIQFALERG---IGAMISALSTKQLPYPSSSFEMVHCSR 300 (617)
Q Consensus 225 r~~~g~rVLDIGCGtG~~a~~La~~-gv~~v~v~~iDis~~~lq~A~erg---~~~~~~~~d~~~Lpf~d~sFDlV~~s~ 300 (617)
...++.+|||||||+|.++..++++ +. .++++|+++.+++.|+++. .++.+..+|+..+|+++++||+|+++.
T Consensus 52 ~~~~~~~vLdiG~G~G~~~~~l~~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~ 128 (266)
T 3ujc_A 52 ELNENSKVLDIGSGLGGGCMYINEKYGA---HTHGIDICSNIVNMANERVSGNNKIIFEANDILTKEFPENNFDLIYSRD 128 (266)
T ss_dssp CCCTTCEEEEETCTTSHHHHHHHHHHCC---EEEEEESCHHHHHHHHHTCCSCTTEEEEECCTTTCCCCTTCEEEEEEES
T ss_pred CCCCCCEEEEECCCCCHHHHHHHHHcCC---EEEEEeCCHHHHHHHHHHhhcCCCeEEEECccccCCCCCCcEEEEeHHH
Confidence 4567788999999999999999987 43 6788899999999999986 467889999999999999999999999
Q ss_pred cccccc-cchHHHHHHHHHhccCCeEEEEEeCCCCCCCCCCh-------------hhHHHHHHHHHHcCceEEEEe
Q 039518 301 CRVDWH-ANDGILLKEVDRVLRPNGYFVYSAPPAYRKDKDYP-------------LIWDKLVNLTTAMCWKLIARK 362 (617)
Q Consensus 301 ~l~h~~-~d~~~~L~el~RvLrPGG~Liis~p~~~~~~~~~~-------------~~W~~le~La~~~gw~~v~~~ 362 (617)
+++|+. .++..+++++.|+|||||.+++.++.......... ..-+.+.+++++.||+.+...
T Consensus 129 ~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~ 204 (266)
T 3ujc_A 129 AILALSLENKNKLFQKCYKWLKPTGTLLITDYCATEKENWDDEFKEYVKQRKYTLITVEEYADILTACNFKNVVSK 204 (266)
T ss_dssp CGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEESCGGGCCHHHHHHHHHHTCCCCCHHHHHHHHHHTTCEEEEEE
T ss_pred HHHhcChHHHHHHHHHHHHHcCCCCEEEEEEeccCCcccchHHHHHHHhcCCCCCCCHHHHHHHHHHcCCeEEEEE
Confidence 888874 47889999999999999999998753221000000 013348888999999987643
No 9
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.58 E-value=8.1e-15 Score=146.22 Aligned_cols=102 Identities=18% Similarity=0.176 Sum_probs=91.0
Q ss_pred CCCCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHhC--CCcEEEEecCCCCCCCCCCeeEEEecccccc
Q 039518 227 AGVFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALERG--IGAMISALSTKQLPYPSSSFEMVHCSRCRVD 304 (617)
Q Consensus 227 ~~g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~erg--~~~~~~~~d~~~Lpf~d~sFDlV~~s~~l~h 304 (617)
.++.+|||||||+|.++..+++.+.. .++++|+++.+++.|+++. .++.+..+|+..+++++++||+|+++.+++|
T Consensus 43 ~~~~~vLD~GcG~G~~~~~l~~~~~~--~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~ 120 (253)
T 3g5l_A 43 FNQKTVLDLGCGFGWHCIYAAEHGAK--KVLGIDLSERMLTEAKRKTTSPVVCYEQKAIEDIAIEPDAYNVVLSSLALHY 120 (253)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHTTCS--EEEEEESCHHHHHHHHHHCCCTTEEEEECCGGGCCCCTTCEEEEEEESCGGG
T ss_pred cCCCEEEEECCCCCHHHHHHHHcCCC--EEEEEECCHHHHHHHHHhhccCCeEEEEcchhhCCCCCCCeEEEEEchhhhh
Confidence 46778999999999999999998764 6788999999999999885 4688899999999999999999999998777
Q ss_pred cccchHHHHHHHHHhccCCeEEEEEeC
Q 039518 305 WHANDGILLKEVDRVLRPNGYFVYSAP 331 (617)
Q Consensus 305 ~~~d~~~~L~el~RvLrPGG~Liis~p 331 (617)
+ +++..+|+++.++|||||.++++.+
T Consensus 121 ~-~~~~~~l~~~~~~LkpgG~l~~~~~ 146 (253)
T 3g5l_A 121 I-ASFDDICKKVYINLKSSGSFIFSVE 146 (253)
T ss_dssp C-SCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred h-hhHHHHHHHHHHHcCCCcEEEEEeC
Confidence 6 4899999999999999999999854
No 10
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.58 E-value=2.7e-14 Score=141.92 Aligned_cols=133 Identities=18% Similarity=0.263 Sum_probs=105.3
Q ss_pred cCCCCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHh----C-CCcEEEEecCCCCCCCCCCeeEEEecc
Q 039518 226 SAGVFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALER----G-IGAMISALSTKQLPYPSSSFEMVHCSR 300 (617)
Q Consensus 226 ~~~g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~er----g-~~~~~~~~d~~~Lpf~d~sFDlV~~s~ 300 (617)
+.++.+|||||||+|.++..+++.+. .++++|+++.+++.|+++ + .++.+..+|++.+|+++++||+|+++.
T Consensus 19 ~~~~~~vLDiGcG~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~ 95 (239)
T 1xxl_A 19 CRAEHRVLDIGAGAGHTALAFSPYVQ---ECIGVDATKEMVEVASSFAQEKGVENVRFQQGTAESLPFPDDSFDIITCRY 95 (239)
T ss_dssp CCTTCEEEEESCTTSHHHHHHGGGSS---EEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBTTBCCSCTTCEEEEEEES
T ss_pred cCCCCEEEEEccCcCHHHHHHHHhCC---EEEEEECCHHHHHHHHHHHHHcCCCCeEEEecccccCCCCCCcEEEEEECC
Confidence 34567899999999999999998865 678889999999988765 3 357888999999999999999999998
Q ss_pred cccccccchHHHHHHHHHhccCCeEEEEEeCCCCCC----------------CCCChhhHHHHHHHHHHcCceEEEEe
Q 039518 301 CRVDWHANDGILLKEVDRVLRPNGYFVYSAPPAYRK----------------DKDYPLIWDKLVNLTTAMCWKLIARK 362 (617)
Q Consensus 301 ~l~h~~~d~~~~L~el~RvLrPGG~Liis~p~~~~~----------------~~~~~~~W~~le~La~~~gw~~v~~~ 362 (617)
+++|+. ++..+|.++.|+|||||++++.++..... .........++.+++++.||+.+...
T Consensus 96 ~l~~~~-~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGf~~~~~~ 172 (239)
T 1xxl_A 96 AAHHFS-DVRKAVREVARVLKQDGRFLLVDHYAPEDPVLDEFVNHLNRLRDPSHVRESSLSEWQAMFSANQLAYQDIQ 172 (239)
T ss_dssp CGGGCS-CHHHHHHHHHHHEEEEEEEEEEEECBCSSHHHHHHHHHHHHHHCTTCCCCCBHHHHHHHHHHTTEEEEEEE
T ss_pred chhhcc-CHHHHHHHHHHHcCCCcEEEEEEcCCCCChhHHHHHHHHHHhccccccCCCCHHHHHHHHHHCCCcEEEEE
Confidence 888876 89999999999999999999986432110 00011123457888899999877643
No 11
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.58 E-value=1.4e-14 Score=141.15 Aligned_cols=136 Identities=13% Similarity=0.155 Sum_probs=106.8
Q ss_pred CCCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHhCC-CcEEEEecCCCCCCCCCCeeEEEecccccccc
Q 039518 228 GVFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALERGI-GAMISALSTKQLPYPSSSFEMVHCSRCRVDWH 306 (617)
Q Consensus 228 ~g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~erg~-~~~~~~~d~~~Lpf~d~sFDlV~~s~~l~h~~ 306 (617)
++.+|||+|||+|.++..|++++. .++++|+++.+++.|+++.. ++.+..+|+..++++ ++||+|+++.+++|+.
T Consensus 45 ~~~~vLDiGcG~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~d~~~~~~~-~~fD~v~~~~~l~~~~ 120 (220)
T 3hnr_A 45 SFGNVLEFGVGTGNLTNKLLLAGR---TVYGIEPSREMRMIAKEKLPKEFSITEGDFLSFEVP-TSIDTIVSTYAFHHLT 120 (220)
T ss_dssp CCSEEEEECCTTSHHHHHHHHTTC---EEEEECSCHHHHHHHHHHSCTTCCEESCCSSSCCCC-SCCSEEEEESCGGGSC
T ss_pred CCCeEEEeCCCCCHHHHHHHhCCC---eEEEEeCCHHHHHHHHHhCCCceEEEeCChhhcCCC-CCeEEEEECcchhcCC
Confidence 455799999999999999998864 67888999999999999865 688889999999988 8999999998887776
Q ss_pred cchHH--HHHHHHHhccCCeEEEEEeCCCCCCCCC----------------------ChhhHHHHHHHHHHcCceEEEEe
Q 039518 307 ANDGI--LLKEVDRVLRPNGYFVYSAPPAYRKDKD----------------------YPLIWDKLVNLTTAMCWKLIARK 362 (617)
Q Consensus 307 ~d~~~--~L~el~RvLrPGG~Liis~p~~~~~~~~----------------------~~~~W~~le~La~~~gw~~v~~~ 362 (617)
++.. +|+++.++|||||.++++++........ .-..-+.+.++++++||+++...
T Consensus 121 -~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~v~~~~ 199 (220)
T 3hnr_A 121 -DDEKNVAIAKYSQLLNKGGKIVFADTIFADQDAYDKTVEAAKQRGFHQLANDLQTEYYTRIPVMQTIFENNGFHVTFTR 199 (220)
T ss_dssp -HHHHHHHHHHHHHHSCTTCEEEEEEECBSSHHHHHHHHHHHHHTTCHHHHHHHHHSCCCBHHHHHHHHHHTTEEEEEEE
T ss_pred -hHHHHHHHHHHHHhcCCCCEEEEEeccccChHHHHHHHHHHHhCCCccchhhcchhhcCCHHHHHHHHHHCCCEEEEee
Confidence 5655 9999999999999999997532211000 00012458889999999988766
Q ss_pred eeeEEE
Q 039518 363 IQTAIW 368 (617)
Q Consensus 363 ~~~~Iw 368 (617)
.....|
T Consensus 200 ~~~~~w 205 (220)
T 3hnr_A 200 LNHFVW 205 (220)
T ss_dssp CSSSEE
T ss_pred ccceEE
Confidence 553333
No 12
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.57 E-value=1.9e-14 Score=140.08 Aligned_cols=135 Identities=16% Similarity=0.197 Sum_probs=107.1
Q ss_pred CCCCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHh----CC-CcEEEEecCCCCCCCCCCeeEEEeccc
Q 039518 227 AGVFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALER----GI-GAMISALSTKQLPYPSSSFEMVHCSRC 301 (617)
Q Consensus 227 ~~g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~er----g~-~~~~~~~d~~~Lpf~d~sFDlV~~s~~ 301 (617)
.++.+|||+|||+|.++..+++.+.....++++|+++.+++.|+++ +. ++.+..+|+..+++++++||+|+++.+
T Consensus 36 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~ 115 (219)
T 3dh0_A 36 KEGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLGLKNVEVLKSEENKIPLPDNTVDFIFMAFT 115 (219)
T ss_dssp CTTCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECBTTBCSSCSSCEEEEEEESC
T ss_pred CCCCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCcEEEEecccccCCCCCCCeeEEEeehh
Confidence 4556799999999999999988752223788899999999998876 33 588899999999999999999999998
Q ss_pred ccccccchHHHHHHHHHhccCCeEEEEEeCCCCCCCC--C--ChhhHHHHHHHHHHcCceEEEEe
Q 039518 302 RVDWHANDGILLKEVDRVLRPNGYFVYSAPPAYRKDK--D--YPLIWDKLVNLTTAMCWKLIARK 362 (617)
Q Consensus 302 l~h~~~d~~~~L~el~RvLrPGG~Liis~p~~~~~~~--~--~~~~W~~le~La~~~gw~~v~~~ 362 (617)
++|+. ++..+++++.++|+|||.+++++........ . .....+++.+++++.||+.+...
T Consensus 116 l~~~~-~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~ 179 (219)
T 3dh0_A 116 FHELS-EPLKFLEELKRVAKPFAYLAIIDWKKEERDKGPPPEEVYSEWEVGLILEDAGIRVGRVV 179 (219)
T ss_dssp GGGCS-SHHHHHHHHHHHEEEEEEEEEEEECSSCCSSSCCGGGSCCHHHHHHHHHHTTCEEEEEE
T ss_pred hhhcC-CHHHHHHHHHHHhCCCeEEEEEEecccccccCCchhcccCHHHHHHHHHHCCCEEEEEE
Confidence 88775 8999999999999999999998753222111 0 11114568999999999988754
No 13
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.57 E-value=1.4e-14 Score=148.04 Aligned_cols=132 Identities=16% Similarity=0.160 Sum_probs=105.2
Q ss_pred cCCCCeEEEECCCCcHHHHHhccC-CCcEEEeeecCCcHHHHHHHHHh----CC--CcEEEEecCCCCCCCCCCeeEEEe
Q 039518 226 SAGVFQVLDVGCGVASFSAFLLPL-DIQTMSFAPKDGHENQIQFALER----GI--GAMISALSTKQLPYPSSSFEMVHC 298 (617)
Q Consensus 226 ~~~g~rVLDIGCGtG~~a~~La~~-gv~~v~v~~iDis~~~lq~A~er----g~--~~~~~~~d~~~Lpf~d~sFDlV~~ 298 (617)
+.++.+|||||||+|.++..|++. +. .++++|+++.+++.|+++ +. ++.+..+|+..+|+++++||+|++
T Consensus 80 ~~~~~~vLDiGcG~G~~~~~l~~~~~~---~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~ 156 (297)
T 2o57_A 80 LQRQAKGLDLGAGYGGAARFLVRKFGV---SIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLEIPCEDNSYDFIWS 156 (297)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHCC---EEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTSCSSCTTCEEEEEE
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHhCC---EEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEcCcccCCCCCCCEeEEEe
Confidence 346678999999999999999886 44 678889999999988875 33 478899999999999999999999
Q ss_pred cccccccccchHHHHHHHHHhccCCeEEEEEeCCCCCCCCCC--hh-----------hHHHHHHHHHHcCceEEEE
Q 039518 299 SRCRVDWHANDGILLKEVDRVLRPNGYFVYSAPPAYRKDKDY--PL-----------IWDKLVNLTTAMCWKLIAR 361 (617)
Q Consensus 299 s~~l~h~~~d~~~~L~el~RvLrPGG~Liis~p~~~~~~~~~--~~-----------~W~~le~La~~~gw~~v~~ 361 (617)
..+++|+. ++..+|+++.|+|||||+++++++......... .. .-..+.+++++.||+++..
T Consensus 157 ~~~l~~~~-~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~ 231 (297)
T 2o57_A 157 QDAFLHSP-DKLKVFQECARVLKPRGVMAITDPMKEDGIDKSSIQPILDRIKLHDMGSLGLYRSLAKECGLVTLRT 231 (297)
T ss_dssp ESCGGGCS-CHHHHHHHHHHHEEEEEEEEEEEEEECTTCCGGGGHHHHHHHTCSSCCCHHHHHHHHHHTTEEEEEE
T ss_pred cchhhhcC-CHHHHHHHHHHHcCCCeEEEEEEeccCCCCchHHHHHHHHHhcCCCCCCHHHHHHHHHHCCCeEEEE
Confidence 99888876 799999999999999999999976322111100 00 1234778889999988764
No 14
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.56 E-value=2.4e-14 Score=144.24 Aligned_cols=133 Identities=21% Similarity=0.215 Sum_probs=104.1
Q ss_pred cCCCCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHh----CC--CcEEEEecCCCCCCCCCCeeEEEec
Q 039518 226 SAGVFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALER----GI--GAMISALSTKQLPYPSSSFEMVHCS 299 (617)
Q Consensus 226 ~~~g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~er----g~--~~~~~~~d~~~Lpf~d~sFDlV~~s 299 (617)
+.++.+|||||||+|.++..+++.. ...++++|+++.+++.|+++ +. ++.+..+|+..+|+++++||+|++.
T Consensus 59 ~~~~~~vLDiGcG~G~~~~~l~~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~ 136 (273)
T 3bus_A 59 VRSGDRVLDVGCGIGKPAVRLATAR--DVRVTGISISRPQVNQANARATAAGLANRVTFSYADAMDLPFEDASFDAVWAL 136 (273)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHS--CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCSCTTCEEEEEEE
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHhc--CCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECccccCCCCCCCccEEEEe
Confidence 4567789999999999999998753 13788899999999988876 43 4788899999999999999999999
Q ss_pred ccccccccchHHHHHHHHHhccCCeEEEEEeCCCCCCCCC----------------ChhhHHHHHHHHHHcCceEEEE
Q 039518 300 RCRVDWHANDGILLKEVDRVLRPNGYFVYSAPPAYRKDKD----------------YPLIWDKLVNLTTAMCWKLIAR 361 (617)
Q Consensus 300 ~~l~h~~~d~~~~L~el~RvLrPGG~Liis~p~~~~~~~~----------------~~~~W~~le~La~~~gw~~v~~ 361 (617)
.+++|+. ++..+|+++.++|||||+++++++........ ....-+.+.+++++.||+++..
T Consensus 137 ~~l~~~~-~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~ 213 (273)
T 3bus_A 137 ESLHHMP-DRGRALREMARVLRPGGTVAIADFVLLAPVEGAKKEAVDAFRAGGGVLSLGGIDEYESDVRQAELVVTST 213 (273)
T ss_dssp SCTTTSS-CHHHHHHHHHTTEEEEEEEEEEEEEESSCCCHHHHHHHHHHHHHHTCCCCCCHHHHHHHHHHTTCEEEEE
T ss_pred chhhhCC-CHHHHHHHHHHHcCCCeEEEEEEeeccCCCChhHHHHHHHHHhhcCccCCCCHHHHHHHHHHcCCeEEEE
Confidence 8888775 78999999999999999999987532211100 0001234788888999988763
No 15
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.56 E-value=1.5e-14 Score=143.54 Aligned_cols=128 Identities=19% Similarity=0.214 Sum_probs=101.5
Q ss_pred CCCCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHhCCCcEEEEecCCCC--CCCCCCeeEEEecccccc
Q 039518 227 AGVFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALERGIGAMISALSTKQL--PYPSSSFEMVHCSRCRVD 304 (617)
Q Consensus 227 ~~g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~erg~~~~~~~~d~~~L--pf~d~sFDlV~~s~~l~h 304 (617)
.++.+|||||||+|.++..+++.+. .++++|+++.+++.|+++ +.+..+|..++ |+++++||+|+|+.+++|
T Consensus 40 ~~~~~vLDiGcG~G~~~~~l~~~~~---~v~gvD~s~~~~~~a~~~---~~~~~~d~~~~~~~~~~~~fD~i~~~~~l~~ 113 (240)
T 3dli_A 40 KGCRRVLDIGCGRGEFLELCKEEGI---ESIGVDINEDMIKFCEGK---FNVVKSDAIEYLKSLPDKYLDGVMISHFVEH 113 (240)
T ss_dssp TTCSCEEEETCTTTHHHHHHHHHTC---CEEEECSCHHHHHHHHTT---SEEECSCHHHHHHTSCTTCBSEEEEESCGGG
T ss_pred cCCCeEEEEeCCCCHHHHHHHhCCC---cEEEEECCHHHHHHHHhh---cceeeccHHHHhhhcCCCCeeEEEECCchhh
Confidence 3567799999999999999998866 467889999999999987 67777777665 788999999999998888
Q ss_pred ccc-chHHHHHHHHHhccCCeEEEEEeCCCCCC--------CCC--ChhhHHHHHHHHHHcCceEEE
Q 039518 305 WHA-NDGILLKEVDRVLRPNGYFVYSAPPAYRK--------DKD--YPLIWDKLVNLTTAMCWKLIA 360 (617)
Q Consensus 305 ~~~-d~~~~L~el~RvLrPGG~Liis~p~~~~~--------~~~--~~~~W~~le~La~~~gw~~v~ 360 (617)
+.. +...+++++.|+|||||++++.++..... .+. ....-+.+.+++++.||+.+.
T Consensus 114 ~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~~~~ 180 (240)
T 3dli_A 114 LDPERLFELLSLCYSKMKYSSYIVIESPNPTSLYSLINFYIDPTHKKPVHPETLKFILEYLGFRDVK 180 (240)
T ss_dssp SCGGGHHHHHHHHHHHBCTTCCEEEEEECTTSHHHHHHHTTSTTCCSCCCHHHHHHHHHHHTCEEEE
T ss_pred CCcHHHHHHHHHHHHHcCCCcEEEEEeCCcchhHHHHHHhcCccccccCCHHHHHHHHHHCCCeEEE
Confidence 762 34899999999999999999998753210 011 111135688999999999776
No 16
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.55 E-value=1.7e-14 Score=139.98 Aligned_cols=131 Identities=20% Similarity=0.255 Sum_probs=104.7
Q ss_pred CCCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHhCCCcEEEEecCCCCCCCCCCeeEEEecccccccc-
Q 039518 228 GVFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALERGIGAMISALSTKQLPYPSSSFEMVHCSRCRVDWH- 306 (617)
Q Consensus 228 ~g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~erg~~~~~~~~d~~~Lpf~d~sFDlV~~s~~l~h~~- 306 (617)
++.+|||+|||+|.++..+++++. .++++|+++.+++.|+++. ++.+..+++..++ ++++||+|+|+.+++|+.
T Consensus 43 ~~~~vLDiGcG~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~-~~~~~~~d~~~~~-~~~~fD~v~~~~~l~~~~~ 117 (211)
T 3e23_A 43 AGAKILELGCGAGYQAEAMLAAGF---DVDATDGSPELAAEASRRL-GRPVRTMLFHQLD-AIDAYDAVWAHACLLHVPR 117 (211)
T ss_dssp TTCEEEESSCTTSHHHHHHHHTTC---EEEEEESCHHHHHHHHHHH-TSCCEECCGGGCC-CCSCEEEEEECSCGGGSCH
T ss_pred CCCcEEEECCCCCHHHHHHHHcCC---eEEEECCCHHHHHHHHHhc-CCceEEeeeccCC-CCCcEEEEEecCchhhcCH
Confidence 456799999999999999998865 6778899999999999874 4566778888888 788999999999888876
Q ss_pred cchHHHHHHHHHhccCCeEEEEEeCCCCCCCCC------ChhhHHHHHHHHHHcC-ceEEEEee
Q 039518 307 ANDGILLKEVDRVLRPNGYFVYSAPPAYRKDKD------YPLIWDKLVNLTTAMC-WKLIARKI 363 (617)
Q Consensus 307 ~d~~~~L~el~RvLrPGG~Liis~p~~~~~~~~------~~~~W~~le~La~~~g-w~~v~~~~ 363 (617)
++...+|+++.++|||||+++++.+........ ....-+.+.+++++.| |+++....
T Consensus 118 ~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aG~f~~~~~~~ 181 (211)
T 3e23_A 118 DELADVLKLIWRALKPGGLFYASYKSGEGEGRDKLARYYNYPSEEWLRARYAEAGTWASVAVES 181 (211)
T ss_dssp HHHHHHHHHHHHHEEEEEEEEEEEECCSSCEECTTSCEECCCCHHHHHHHHHHHCCCSEEEEEE
T ss_pred HHHHHHHHHHHHhcCCCcEEEEEEcCCCcccccccchhccCCCHHHHHHHHHhCCCcEEEEEEe
Confidence 467789999999999999999997644321110 0012456899999999 99987543
No 17
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.55 E-value=3e-14 Score=141.99 Aligned_cols=131 Identities=13% Similarity=0.170 Sum_probs=104.5
Q ss_pred cCCCCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHh----CCC--cEEEEecCCCCCCCCCCeeEEEec
Q 039518 226 SAGVFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALER----GIG--AMISALSTKQLPYPSSSFEMVHCS 299 (617)
Q Consensus 226 ~~~g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~er----g~~--~~~~~~d~~~Lpf~d~sFDlV~~s 299 (617)
+.++.+|||||||+|.++..+++.+.. .++++|+++.+++.|+++ +.. +.+..+|+..+|+++++||+|+++
T Consensus 44 ~~~~~~vLDiG~G~G~~~~~l~~~~~~--~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~ 121 (257)
T 3f4k_A 44 LTDDAKIADIGCGTGGQTLFLADYVKG--QITGIDLFPDFIEIFNENAVKANCADRVKGITGSMDNLPFQNEELDLIWSE 121 (257)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHCCS--EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCSSCTTCEEEEEEE
T ss_pred CCCCCeEEEeCCCCCHHHHHHHHhCCC--eEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCCCCCCCEEEEEec
Confidence 356678999999999999999988643 788899999999988876 433 788999999999999999999999
Q ss_pred ccccccccchHHHHHHHHHhccCCeEEEEEeCCCCCCCCC--Chhh----------HHHHHHHHHHcCceEEE
Q 039518 300 RCRVDWHANDGILLKEVDRVLRPNGYFVYSAPPAYRKDKD--YPLI----------WDKLVNLTTAMCWKLIA 360 (617)
Q Consensus 300 ~~l~h~~~d~~~~L~el~RvLrPGG~Liis~p~~~~~~~~--~~~~----------W~~le~La~~~gw~~v~ 360 (617)
.+++|+ ++..+++++.++|||||+++++++........ .... ...+.++++++||+.+.
T Consensus 122 ~~l~~~--~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~ 192 (257)
T 3f4k_A 122 GAIYNI--GFERGMNEWSKYLKKGGFIAVSEASWFTSERPAEIEDFWMDAYPEISVIPTCIDKMERAGYTPTA 192 (257)
T ss_dssp SCSCCC--CHHHHHHHHHTTEEEEEEEEEEEEEESSSCCCHHHHHHHHHHCTTCCBHHHHHHHHHHTTEEEEE
T ss_pred ChHhhc--CHHHHHHHHHHHcCCCcEEEEEEeeccCCCChHHHHHHHHHhCCCCCCHHHHHHHHHHCCCeEEE
Confidence 888776 68899999999999999999998531111111 0111 23478888999998876
No 18
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.55 E-value=1.2e-14 Score=148.11 Aligned_cols=104 Identities=15% Similarity=0.113 Sum_probs=86.2
Q ss_pred cCCCCeEEEECCCCcHHHHHhccCC-CcEEEeeecCCcHHHHHHHHHh----C--CCcEEEEecCCCCCCCCCCeeEEEe
Q 039518 226 SAGVFQVLDVGCGVASFSAFLLPLD-IQTMSFAPKDGHENQIQFALER----G--IGAMISALSTKQLPYPSSSFEMVHC 298 (617)
Q Consensus 226 ~~~g~rVLDIGCGtG~~a~~La~~g-v~~v~v~~iDis~~~lq~A~er----g--~~~~~~~~d~~~Lpf~d~sFDlV~~ 298 (617)
++++.+|||||||+|.++..|+++. .....++++|+|+.|++.|+++ + .++.+..+|+.++|++ .||+|++
T Consensus 68 ~~~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~D~~~~~~~--~~d~v~~ 145 (261)
T 4gek_A 68 VQPGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGDIRDIAIE--NASMVVL 145 (261)
T ss_dssp CCTTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCTTTCCCC--SEEEEEE
T ss_pred CCCCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhccCceEEEeeccccccccc--cccccee
Confidence 4678899999999999999998762 2334788999999999999886 2 3578889999988874 5999999
Q ss_pred cccccccc-cchHHHHHHHHHhccCCeEEEEEeC
Q 039518 299 SRCRVDWH-ANDGILLKEVDRVLRPNGYFVYSAP 331 (617)
Q Consensus 299 s~~l~h~~-~d~~~~L~el~RvLrPGG~Liis~p 331 (617)
+.+++++. ++...+|++++|+|||||.|++++.
T Consensus 146 ~~~l~~~~~~~~~~~l~~i~~~LkpGG~lii~e~ 179 (261)
T 4gek_A 146 NFTLQFLEPSERQALLDKIYQGLNPGGALVLSEK 179 (261)
T ss_dssp ESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred eeeeeecCchhHhHHHHHHHHHcCCCcEEEEEec
Confidence 98777665 2345789999999999999999875
No 19
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.55 E-value=3.1e-14 Score=137.42 Aligned_cols=129 Identities=13% Similarity=0.142 Sum_probs=103.0
Q ss_pred eEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHh----C--CCcEEEEecCCCCCCCCCCeeEEEecccccc
Q 039518 231 QVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALER----G--IGAMISALSTKQLPYPSSSFEMVHCSRCRVD 304 (617)
Q Consensus 231 rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~er----g--~~~~~~~~d~~~Lpf~d~sFDlV~~s~~l~h 304 (617)
+|||+|||+|.++..|+++ ....++++|+++.+++.|+++ + .++.+..+|+..+++++++||+|+++.+++|
T Consensus 46 ~vLdiG~G~G~~~~~l~~~--~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~l~~ 123 (219)
T 3dlc_A 46 TCIDIGSGPGALSIALAKQ--SDFSIRALDFSKHMNEIALKNIADANLNDRIQIVQGDVHNIPIEDNYADLIVSRGSVFF 123 (219)
T ss_dssp EEEEETCTTSHHHHHHHHH--SEEEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECBTTBCSSCTTCEEEEEEESCGGG
T ss_pred EEEEECCCCCHHHHHHHHc--CCCeEEEEECCHHHHHHHHHHHHhccccCceEEEEcCHHHCCCCcccccEEEECchHhh
Confidence 6999999999999999987 234788999999999999887 3 3578899999999999999999999998888
Q ss_pred cccchHHHHHHHHHhccCCeEEEEEeCCCCCCC------------C---------CChhhHHHHHHHHHHcCceEEEEe
Q 039518 305 WHANDGILLKEVDRVLRPNGYFVYSAPPAYRKD------------K---------DYPLIWDKLVNLTTAMCWKLIARK 362 (617)
Q Consensus 305 ~~~d~~~~L~el~RvLrPGG~Liis~p~~~~~~------------~---------~~~~~W~~le~La~~~gw~~v~~~ 362 (617)
+ .++..+++++.++|+|||.++++++...... + .....-+.+.+++++.||+.+...
T Consensus 124 ~-~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~~~ 201 (219)
T 3dlc_A 124 W-EDVATAFREIYRILKSGGKTYIGGGFGNKELRDSISAEMIRKNPDWKEFNRKNISQENVERFQNVLDEIGISSYEII 201 (219)
T ss_dssp C-SCHHHHHHHHHHHEEEEEEEEEEECCSSHHHHHHHHHHHHHHCTTHHHHHHHHSSHHHHHHHHHHHHHHTCSSEEEE
T ss_pred c-cCHHHHHHHHHHhCCCCCEEEEEeccCcHHHHHHHHHHHHHhHHHHHhhhhhccccCCHHHHHHHHHHcCCCeEEEE
Confidence 7 4899999999999999999999864321100 0 000011448889999999877644
No 20
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.55 E-value=3e-14 Score=143.61 Aligned_cols=131 Identities=15% Similarity=0.178 Sum_probs=104.8
Q ss_pred cCCCCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHh----CC--CcEEEEecCCCCCCCCCCeeEEEec
Q 039518 226 SAGVFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALER----GI--GAMISALSTKQLPYPSSSFEMVHCS 299 (617)
Q Consensus 226 ~~~g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~er----g~--~~~~~~~d~~~Lpf~d~sFDlV~~s 299 (617)
+.++.+|||||||+|.++..+++.+. ..++++|+++.+++.|+++ ++ ++.+..+|+.++|+++++||+|+|+
T Consensus 44 ~~~~~~vLDiGcG~G~~~~~la~~~~--~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~i~~~ 121 (267)
T 3kkz_A 44 LTEKSLIADIGCGTGGQTMVLAGHVT--GQVTGLDFLSGFIDIFNRNARQSGLQNRVTGIVGSMDDLPFRNEELDLIWSE 121 (267)
T ss_dssp CCTTCEEEEETCTTCHHHHHHHTTCS--SEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCCTTCEEEEEES
T ss_pred CCCCCEEEEeCCCCCHHHHHHHhccC--CEEEEEeCCHHHHHHHHHHHHHcCCCcCcEEEEcChhhCCCCCCCEEEEEEc
Confidence 45678899999999999999998832 2788899999999998876 43 3889999999999999999999999
Q ss_pred ccccccccchHHHHHHHHHhccCCeEEEEEeCCCCCCCCC--ChhhH----------HHHHHHHHHcCceEEE
Q 039518 300 RCRVDWHANDGILLKEVDRVLRPNGYFVYSAPPAYRKDKD--YPLIW----------DKLVNLTTAMCWKLIA 360 (617)
Q Consensus 300 ~~l~h~~~d~~~~L~el~RvLrPGG~Liis~p~~~~~~~~--~~~~W----------~~le~La~~~gw~~v~ 360 (617)
.+++|+ ++..+++++.++|||||+++++++........ ....| ..+.++++++||+.+.
T Consensus 122 ~~~~~~--~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~ 192 (267)
T 3kkz_A 122 GAIYNI--GFERGLNEWRKYLKKGGYLAVSECSWFTDERPAEINDFWMDAYPEIDTIPNQVAKIHKAGYLPVA 192 (267)
T ss_dssp SCGGGT--CHHHHHHHHGGGEEEEEEEEEEEEEESSSCCCHHHHHHHHHHCTTCEEHHHHHHHHHHTTEEEEE
T ss_pred CCceec--CHHHHHHHHHHHcCCCCEEEEEEeeecCCCChHHHHHHHHHhCCCCCCHHHHHHHHHHCCCEEEE
Confidence 988776 78999999999999999999987632111111 11122 3478888999999886
No 21
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.54 E-value=8.5e-14 Score=136.99 Aligned_cols=102 Identities=20% Similarity=0.272 Sum_probs=87.3
Q ss_pred CCCCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHhCC---CcEEEEecCCCCCCCCCCeeEEEeccccc
Q 039518 227 AGVFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALERGI---GAMISALSTKQLPYPSSSFEMVHCSRCRV 303 (617)
Q Consensus 227 ~~g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~erg~---~~~~~~~d~~~Lpf~d~sFDlV~~s~~l~ 303 (617)
.++.+|||||||+|.++..+++.... ..++++|+++.+++.|+++.. ++.+..+|+..++++ ++||+|+++.+++
T Consensus 43 ~~~~~vLDiG~G~G~~~~~l~~~~~~-~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~-~~fD~v~~~~~l~ 120 (234)
T 3dtn_A 43 TENPDILDLGAGTGLLSAFLMEKYPE-ATFTLVDMSEKMLEIAKNRFRGNLKVKYIEADYSKYDFE-EKYDMVVSALSIH 120 (234)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHCTT-CEEEEEESCHHHHHHHHHHTCSCTTEEEEESCTTTCCCC-SCEEEEEEESCGG
T ss_pred CCCCeEEEecCCCCHHHHHHHHhCCC-CeEEEEECCHHHHHHHHHhhccCCCEEEEeCchhccCCC-CCceEEEEeCccc
Confidence 46688999999999999999987422 278889999999999998743 678899999999887 8999999999888
Q ss_pred ccccchH--HHHHHHHHhccCCeEEEEEeC
Q 039518 304 DWHANDG--ILLKEVDRVLRPNGYFVYSAP 331 (617)
Q Consensus 304 h~~~d~~--~~L~el~RvLrPGG~Liis~p 331 (617)
|+. ++. .+++++.|+|||||.++++++
T Consensus 121 ~~~-~~~~~~~l~~~~~~LkpgG~l~~~~~ 149 (234)
T 3dtn_A 121 HLE-DEDKKELYKRSYSILKESGIFINADL 149 (234)
T ss_dssp GSC-HHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred cCC-HHHHHHHHHHHHHhcCCCcEEEEEEe
Confidence 875 444 599999999999999999874
No 22
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.54 E-value=5.9e-14 Score=139.85 Aligned_cols=101 Identities=14% Similarity=0.177 Sum_probs=89.1
Q ss_pred CCCCeEEEECCCCcHHHHHhccC--CCcEEEeeecCCcHHHHHHHHHhCCCcEEEEecCCCCCCCCCCeeEEEecccccc
Q 039518 227 AGVFQVLDVGCGVASFSAFLLPL--DIQTMSFAPKDGHENQIQFALERGIGAMISALSTKQLPYPSSSFEMVHCSRCRVD 304 (617)
Q Consensus 227 ~~g~rVLDIGCGtG~~a~~La~~--gv~~v~v~~iDis~~~lq~A~erg~~~~~~~~d~~~Lpf~d~sFDlV~~s~~l~h 304 (617)
.++.+|||||||+|.++..++++ +. .++++|+++.+++.|+++..++.+..+|++.++ ++++||+|+++.++++
T Consensus 32 ~~~~~vLdiG~G~G~~~~~l~~~~~~~---~v~~~D~s~~~~~~a~~~~~~~~~~~~d~~~~~-~~~~fD~v~~~~~l~~ 107 (259)
T 2p35_A 32 ERVLNGYDLGCGPGNSTELLTDRYGVN---VITGIDSDDDMLEKAADRLPNTNFGKADLATWK-PAQKADLLYANAVFQW 107 (259)
T ss_dssp SCCSSEEEETCTTTHHHHHHHHHHCTT---SEEEEESCHHHHHHHHHHSTTSEEEECCTTTCC-CSSCEEEEEEESCGGG
T ss_pred CCCCEEEEecCcCCHHHHHHHHhCCCC---EEEEEECCHHHHHHHHHhCCCcEEEECChhhcC-ccCCcCEEEEeCchhh
Confidence 45667999999999999999887 43 577889999999999998777899999999988 7889999999987776
Q ss_pred cccchHHHHHHHHHhccCCeEEEEEeCC
Q 039518 305 WHANDGILLKEVDRVLRPNGYFVYSAPP 332 (617)
Q Consensus 305 ~~~d~~~~L~el~RvLrPGG~Liis~p~ 332 (617)
+ .++..+|.++.++|||||+++++.+.
T Consensus 108 ~-~~~~~~l~~~~~~L~pgG~l~~~~~~ 134 (259)
T 2p35_A 108 V-PDHLAVLSQLMDQLESGGVLAVQMPD 134 (259)
T ss_dssp S-TTHHHHHHHHGGGEEEEEEEEEEEEC
T ss_pred C-CCHHHHHHHHHHhcCCCeEEEEEeCC
Confidence 6 48999999999999999999999863
No 23
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.54 E-value=1.8e-14 Score=143.52 Aligned_cols=131 Identities=12% Similarity=0.049 Sum_probs=101.9
Q ss_pred cCCCCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHh----CC--CcEEEEecCCCCCCCCCCeeEEEec
Q 039518 226 SAGVFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALER----GI--GAMISALSTKQLPYPSSSFEMVHCS 299 (617)
Q Consensus 226 ~~~g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~er----g~--~~~~~~~d~~~Lpf~d~sFDlV~~s 299 (617)
+.++.+|||||||+|.++..+++... ..++++|+++.+++.|+++ ++ ++.+..+|+.++++ +++||+|+|.
T Consensus 34 ~~~~~~VLDiGcG~G~~~~~la~~~~--~~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~-~~~fD~V~~~ 110 (256)
T 1nkv_A 34 MKPGTRILDLGSGSGEMLCTWARDHG--ITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAGYVA-NEKCDVAACV 110 (256)
T ss_dssp CCTTCEEEEETCTTCHHHHHHHHHTC--CEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCTTCCC-SSCEEEEEEE
T ss_pred CCCCCEEEEECCCCCHHHHHHHHhcC--CeEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECChHhCCc-CCCCCEEEEC
Confidence 34667899999999999999987631 2678889999999998765 43 48889999999987 8899999999
Q ss_pred ccccccccchHHHHHHHHHhccCCeEEEEEeCCCCCCCCC-------------ChhhHHHHHHHHHHcCceEEE
Q 039518 300 RCRVDWHANDGILLKEVDRVLRPNGYFVYSAPPAYRKDKD-------------YPLIWDKLVNLTTAMCWKLIA 360 (617)
Q Consensus 300 ~~l~h~~~d~~~~L~el~RvLrPGG~Liis~p~~~~~~~~-------------~~~~W~~le~La~~~gw~~v~ 360 (617)
.+++|+. ++..+|+++.|+|||||+++++++........ .......+.++++++||+.+.
T Consensus 111 ~~~~~~~-~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~ 183 (256)
T 1nkv_A 111 GATWIAG-GFAGAEELLAQSLKPGGIMLIGEPYWRQLPATEEIAQACGVSSTSDFLTLPGLVGAFDDLGYDVVE 183 (256)
T ss_dssp SCGGGTS-SSHHHHHHHTTSEEEEEEEEEEEEEETTCCSSHHHHHTTTCSCGGGSCCHHHHHHHHHTTTBCCCE
T ss_pred CChHhcC-CHHHHHHHHHHHcCCCeEEEEecCcccCCCChHHHHHHHhcccccccCCHHHHHHHHHHCCCeeEE
Confidence 8887766 78999999999999999999987532111100 001124578888999998765
No 24
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.54 E-value=6.6e-14 Score=136.82 Aligned_cols=132 Identities=22% Similarity=0.230 Sum_probs=105.3
Q ss_pred CCCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHhC----C------CcEEEEecCCCCCCCCCCeeEEE
Q 039518 228 GVFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALERG----I------GAMISALSTKQLPYPSSSFEMVH 297 (617)
Q Consensus 228 ~g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~erg----~------~~~~~~~d~~~Lpf~d~sFDlV~ 297 (617)
++.+|||+|||+|.++..+++++. .++++|+++.+++.|+++. . ++.+...++..+++++++||+|+
T Consensus 30 ~~~~vLdiG~G~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~ 106 (235)
T 3sm3_A 30 EDDEILDIGCGSGKISLELASKGY---SVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENASSLSFHDSSFDFAV 106 (235)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTC---EEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTSCCSCTTCEEEEE
T ss_pred CCCeEEEECCCCCHHHHHHHhCCC---eEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEecccccCCCCCceeEEE
Confidence 456799999999999999999865 6788899999999999863 2 35788889999999999999999
Q ss_pred ecccccccccchH---HHHHHHHHhccCCeEEEEEeCCCCCCCCC--------------------------------Chh
Q 039518 298 CSRCRVDWHANDG---ILLKEVDRVLRPNGYFVYSAPPAYRKDKD--------------------------------YPL 342 (617)
Q Consensus 298 ~s~~l~h~~~d~~---~~L~el~RvLrPGG~Liis~p~~~~~~~~--------------------------------~~~ 342 (617)
++.+++|+. ++. .+++++.++|||||+++++++...+.... ...
T Consensus 107 ~~~~l~~~~-~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (235)
T 3sm3_A 107 MQAFLTSVP-DPKERSRIIKEVFRVLKPGAYLYLVEFGQNWHLKLYRKRYLHDFPITKEEGSFLARDPETGETEFIAHHF 185 (235)
T ss_dssp EESCGGGCC-CHHHHHHHHHHHHHHEEEEEEEEEEEEBCCTTSHHHHHHHHHHHHHHCSTTEEEEECTTTCCEEEEEECB
T ss_pred EcchhhcCC-CHHHHHHHHHHHHHHcCCCeEEEEEECCcchhHHHHHHHhhhhccchhhhcceEecccccCCcceeeEeC
Confidence 998888776 566 89999999999999999987543221100 011
Q ss_pred hHHHHHHHHHHcCceEEEEee
Q 039518 343 IWDKLVNLTTAMCWKLIARKI 363 (617)
Q Consensus 343 ~W~~le~La~~~gw~~v~~~~ 363 (617)
.-+++.++++++||+++....
T Consensus 186 ~~~~l~~ll~~aGf~~~~~~~ 206 (235)
T 3sm3_A 186 TEKELVFLLTDCRFEIDYFRV 206 (235)
T ss_dssp CHHHHHHHHHTTTEEEEEEEE
T ss_pred CHHHHHHHHHHcCCEEEEEEe
Confidence 245688999999999987544
No 25
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.54 E-value=5.6e-14 Score=135.98 Aligned_cols=132 Identities=15% Similarity=0.125 Sum_probs=103.4
Q ss_pred CCCCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHhC-CCcEEEEecCCCCCCCCCCeeEEEeccccccc
Q 039518 227 AGVFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALERG-IGAMISALSTKQLPYPSSSFEMVHCSRCRVDW 305 (617)
Q Consensus 227 ~~g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~erg-~~~~~~~~d~~~Lpf~d~sFDlV~~s~~l~h~ 305 (617)
.++.+|||||||+|.++..+++++. .++++|+++.+++.|++.+ .++.+..+|+..+ +++++||+|+++.+++|+
T Consensus 45 ~~~~~vLdiG~G~G~~~~~l~~~~~---~v~~~D~s~~~~~~a~~~~~~~~~~~~~d~~~~-~~~~~~D~v~~~~~l~~~ 120 (218)
T 3ou2_A 45 NIRGDVLELASGTGYWTRHLSGLAD---RVTALDGSAEMIAEAGRHGLDNVEFRQQDLFDW-TPDRQWDAVFFAHWLAHV 120 (218)
T ss_dssp TSCSEEEEESCTTSHHHHHHHHHSS---EEEEEESCHHHHHHHGGGCCTTEEEEECCTTSC-CCSSCEEEEEEESCGGGS
T ss_pred CCCCeEEEECCCCCHHHHHHHhcCC---eEEEEeCCHHHHHHHHhcCCCCeEEEecccccC-CCCCceeEEEEechhhcC
Confidence 4556899999999999999998854 6778899999999999877 5688889999888 788999999999988887
Q ss_pred ccc-hHHHHHHHHHhccCCeEEEEEeCCCCCCC----------C-------CC--------hhhHHHHHHHHHHcCceEE
Q 039518 306 HAN-DGILLKEVDRVLRPNGYFVYSAPPAYRKD----------K-------DY--------PLIWDKLVNLTTAMCWKLI 359 (617)
Q Consensus 306 ~~d-~~~~L~el~RvLrPGG~Liis~p~~~~~~----------~-------~~--------~~~W~~le~La~~~gw~~v 359 (617)
... ...+|+++.++|+|||.++++++...... + .. ...-+++.+++++.||++.
T Consensus 121 ~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~v~ 200 (218)
T 3ou2_A 121 PDDRFEAFWESVRSAVAPGGVVEFVDVTDHERRLEQQDDSEPEVAVRRTLQDGRSFRIVKVFRSPAELTERLTALGWSCS 200 (218)
T ss_dssp CHHHHHHHHHHHHHHEEEEEEEEEEEECCCC------------CEEEEECTTSCEEEEECCCCCHHHHHHHHHHTTEEEE
T ss_pred CHHHHHHHHHHHHHHcCCCeEEEEEeCCCCccccchhhhcccccceeeecCCcchhhHhhcCCCHHHHHHHHHHCCCEEE
Confidence 622 37899999999999999999875321000 0 00 0013568899999999966
Q ss_pred EEe
Q 039518 360 ARK 362 (617)
Q Consensus 360 ~~~ 362 (617)
...
T Consensus 201 ~~~ 203 (218)
T 3ou2_A 201 VDE 203 (218)
T ss_dssp EEE
T ss_pred eee
Confidence 543
No 26
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.53 E-value=6.4e-14 Score=142.29 Aligned_cols=101 Identities=13% Similarity=0.145 Sum_probs=88.7
Q ss_pred CCCCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHhCCCcEEEEecCCCCCCCCCCeeEEEecccccccc
Q 039518 227 AGVFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALERGIGAMISALSTKQLPYPSSSFEMVHCSRCRVDWH 306 (617)
Q Consensus 227 ~~g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~erg~~~~~~~~d~~~Lpf~d~sFDlV~~s~~l~h~~ 306 (617)
.++.+|||||||+|.++..+++.+. .++++|+++.+++.|+++..++.+..+|++.+|+ +++||+|+++.+++++.
T Consensus 56 ~~~~~vLDiGcG~G~~~~~l~~~~~---~v~gvD~s~~~~~~a~~~~~~~~~~~~d~~~~~~-~~~fD~v~~~~~l~~~~ 131 (279)
T 3ccf_A 56 QPGEFILDLGCGTGQLTEKIAQSGA---EVLGTDNAATMIEKARQNYPHLHFDVADARNFRV-DKPLDAVFSNAMLHWVK 131 (279)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHTTC---EEEEEESCHHHHHHHHHHCTTSCEEECCTTTCCC-SSCEEEEEEESCGGGCS
T ss_pred CCCCEEEEecCCCCHHHHHHHhCCC---eEEEEECCHHHHHHHHhhCCCCEEEECChhhCCc-CCCcCEEEEcchhhhCc
Confidence 3556799999999999999998554 6788899999999999987778899999999987 57899999998777665
Q ss_pred cchHHHHHHHHHhccCCeEEEEEeCC
Q 039518 307 ANDGILLKEVDRVLRPNGYFVYSAPP 332 (617)
Q Consensus 307 ~d~~~~L~el~RvLrPGG~Liis~p~ 332 (617)
++..+|.++.|+|||||++++..+.
T Consensus 132 -d~~~~l~~~~~~LkpgG~l~~~~~~ 156 (279)
T 3ccf_A 132 -EPEAAIASIHQALKSGGRFVAEFGG 156 (279)
T ss_dssp -CHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred -CHHHHHHHHHHhcCCCcEEEEEecC
Confidence 8999999999999999999998764
No 27
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.53 E-value=6.7e-14 Score=144.89 Aligned_cols=133 Identities=11% Similarity=0.014 Sum_probs=106.4
Q ss_pred cCCCCeEEEECCCCcHHHHHhccC-CCcEEEeeecCCcHHHHHHHHHh----CC--CcEEEEecCCCCCCCCCCeeEEEe
Q 039518 226 SAGVFQVLDVGCGVASFSAFLLPL-DIQTMSFAPKDGHENQIQFALER----GI--GAMISALSTKQLPYPSSSFEMVHC 298 (617)
Q Consensus 226 ~~~g~rVLDIGCGtG~~a~~La~~-gv~~v~v~~iDis~~~lq~A~er----g~--~~~~~~~d~~~Lpf~d~sFDlV~~ 298 (617)
+.++.+|||||||+|.++..|+++ +. .++++|+++.+++.|+++ ++ ++.+..+|+..+|+++++||+|++
T Consensus 115 ~~~~~~vLDiGcG~G~~~~~la~~~~~---~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~ 191 (312)
T 3vc1_A 115 AGPDDTLVDAGCGRGGSMVMAHRRFGS---RVEGVTLSAAQADFGNRRARELRIDDHVRSRVCNMLDTPFDKGAVTASWN 191 (312)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHHCC---EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCCTTCEEEEEE
T ss_pred CCCCCEEEEecCCCCHHHHHHHHHcCC---EEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhcCCCCCCCEeEEEE
Confidence 567889999999999999999987 54 678889999999998875 43 488999999999999999999999
Q ss_pred cccccccccchHHHHHHHHHhccCCeEEEEEeCCCCCCCCCChh--------------hHHHHHHHHHHcCceEEEEee
Q 039518 299 SRCRVDWHANDGILLKEVDRVLRPNGYFVYSAPPAYRKDKDYPL--------------IWDKLVNLTTAMCWKLIARKI 363 (617)
Q Consensus 299 s~~l~h~~~d~~~~L~el~RvLrPGG~Liis~p~~~~~~~~~~~--------------~W~~le~La~~~gw~~v~~~~ 363 (617)
+.+++|+ ++..+|.++.|+|||||++++.++........... .-+.+.+++++.||+++....
T Consensus 192 ~~~l~~~--~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~aGf~~~~~~~ 268 (312)
T 3vc1_A 192 NESTMYV--DLHDLFSEHSRFLKVGGRYVTITGCWNPRYGQPSKWVSQINAHFECNIHSRREYLRAMADNRLVPHTIVD 268 (312)
T ss_dssp ESCGGGS--CHHHHHHHHHHHEEEEEEEEEEEEEECTTTCSCCHHHHHHHHHHTCCCCBHHHHHHHHHTTTEEEEEEEE
T ss_pred CCchhhC--CHHHHHHHHHHHcCCCcEEEEEEccccccccchhHHHHHHHhhhcCCCCCHHHHHHHHHHCCCEEEEEEe
Confidence 9888776 49999999999999999999987533221111110 123478899999999887543
No 28
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.53 E-value=4.2e-14 Score=140.43 Aligned_cols=134 Identities=17% Similarity=0.104 Sum_probs=105.0
Q ss_pred CCCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHhCC-----CcEEEEecCCCCCCCCCCeeEEEecccc
Q 039518 228 GVFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALERGI-----GAMISALSTKQLPYPSSSFEMVHCSRCR 302 (617)
Q Consensus 228 ~g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~erg~-----~~~~~~~d~~~Lpf~d~sFDlV~~s~~l 302 (617)
++.+|||||||+|.++..|++++. ..++++|+++.+++.|+++.. ++.+..+|+..+++++++||+|++..++
T Consensus 79 ~~~~vLDiGcG~G~~~~~l~~~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l 156 (241)
T 2ex4_A 79 GTSCALDCGAGIGRITKRLLLPLF--REVDMVDITEDFLVQAKTYLGEEGKRVRNYFCCGLQDFTPEPDSYDVIWIQWVI 156 (241)
T ss_dssp CCSEEEEETCTTTHHHHHTTTTTC--SEEEEEESCHHHHHHHHHHTGGGGGGEEEEEECCGGGCCCCSSCEEEEEEESCG
T ss_pred CCCEEEEECCCCCHHHHHHHHhcC--CEEEEEeCCHHHHHHHHHHhhhcCCceEEEEEcChhhcCCCCCCEEEEEEcchh
Confidence 567899999999999999988763 378889999999999998743 3678888988898888899999999988
Q ss_pred ccccc-chHHHHHHHHHhccCCeEEEEEeCCCCC------CCCCChhhHHHHHHHHHHcCceEEEEee
Q 039518 303 VDWHA-NDGILLKEVDRVLRPNGYFVYSAPPAYR------KDKDYPLIWDKLVNLTTAMCWKLIARKI 363 (617)
Q Consensus 303 ~h~~~-d~~~~L~el~RvLrPGG~Liis~p~~~~------~~~~~~~~W~~le~La~~~gw~~v~~~~ 363 (617)
+|+.+ +...+|+++.++|+|||+++++++.... ........-+++.+++++.||+++....
T Consensus 157 ~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~ 224 (241)
T 2ex4_A 157 GHLTDQHLAEFLRRCKGSLRPNGIIVIKDNMAQEGVILDDVDSSVCRDLDVVRRIICSAGLSLLAEER 224 (241)
T ss_dssp GGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEBSSSEEEETTTTEEEEBHHHHHHHHHHTTCCEEEEEE
T ss_pred hhCCHHHHHHHHHHHHHhcCCCeEEEEEEccCCCcceecccCCcccCCHHHHHHHHHHcCCeEEEeee
Confidence 88762 1348999999999999999998753221 0011111245689999999999887543
No 29
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=99.53 E-value=5.9e-14 Score=138.31 Aligned_cols=101 Identities=24% Similarity=0.360 Sum_probs=88.7
Q ss_pred CCCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHhCC--CcEEEEecCCCCCCCCCCeeEEEeccccccc
Q 039518 228 GVFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALERGI--GAMISALSTKQLPYPSSSFEMVHCSRCRVDW 305 (617)
Q Consensus 228 ~g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~erg~--~~~~~~~d~~~Lpf~d~sFDlV~~s~~l~h~ 305 (617)
++.+|||||||+|.++..+++++.. .++++|+++.+++.|+++.. ++.+..+|+..+++++++||+|+++.+++|+
T Consensus 43 ~~~~vLdiG~G~G~~~~~l~~~~~~--~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~ 120 (243)
T 3bkw_A 43 GGLRIVDLGCGFGWFCRWAHEHGAS--YVLGLDLSEKMLARARAAGPDTGITYERADLDKLHLPQDSFDLAYSSLALHYV 120 (243)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTTCS--EEEEEESCHHHHHHHHHTSCSSSEEEEECCGGGCCCCTTCEEEEEEESCGGGC
T ss_pred CCCEEEEEcCcCCHHHHHHHHCCCC--eEEEEcCCHHHHHHHHHhcccCCceEEEcChhhccCCCCCceEEEEecccccc
Confidence 4567999999999999999988652 67888999999999998754 4788888998888888999999999887776
Q ss_pred ccchHHHHHHHHHhccCCeEEEEEeC
Q 039518 306 HANDGILLKEVDRVLRPNGYFVYSAP 331 (617)
Q Consensus 306 ~~d~~~~L~el~RvLrPGG~Liis~p 331 (617)
. ++..+|+++.++|+|||+++++++
T Consensus 121 ~-~~~~~l~~~~~~L~pgG~l~~~~~ 145 (243)
T 3bkw_A 121 E-DVARLFRTVHQALSPGGHFVFSTE 145 (243)
T ss_dssp S-CHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred c-hHHHHHHHHHHhcCcCcEEEEEeC
Confidence 5 899999999999999999999874
No 30
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.52 E-value=1.4e-13 Score=138.14 Aligned_cols=99 Identities=17% Similarity=0.189 Sum_probs=87.3
Q ss_pred CCCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHhCCCcEEEEecCCCCCCCCCCeeEEEecc-cccccc
Q 039518 228 GVFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALERGIGAMISALSTKQLPYPSSSFEMVHCSR-CRVDWH 306 (617)
Q Consensus 228 ~g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~erg~~~~~~~~d~~~Lpf~d~sFDlV~~s~-~l~h~~ 306 (617)
++.+|||||||+|.++..|++++. .++++|+++.+++.|+++..++.+..+|+..+++ +++||+|+|+. +++|+.
T Consensus 50 ~~~~vLDiGcG~G~~~~~l~~~~~---~v~gvD~s~~~~~~a~~~~~~~~~~~~d~~~~~~-~~~fD~v~~~~~~l~~~~ 125 (263)
T 3pfg_A 50 KAASLLDVACGTGMHLRHLADSFG---TVEGLELSADMLAIARRRNPDAVLHHGDMRDFSL-GRRFSAVTCMFSSIGHLA 125 (263)
T ss_dssp TCCEEEEETCTTSHHHHHHTTTSS---EEEEEESCHHHHHHHHHHCTTSEEEECCTTTCCC-SCCEEEEEECTTGGGGSC
T ss_pred CCCcEEEeCCcCCHHHHHHHHcCC---eEEEEECCHHHHHHHHhhCCCCEEEECChHHCCc-cCCcCEEEEcCchhhhcC
Confidence 346799999999999999999875 6788899999999999987788999999999887 78999999997 777765
Q ss_pred --cchHHHHHHHHHhccCCeEEEEEe
Q 039518 307 --ANDGILLKEVDRVLRPNGYFVYSA 330 (617)
Q Consensus 307 --~d~~~~L~el~RvLrPGG~Liis~ 330 (617)
++...+|+++.++|||||++++..
T Consensus 126 ~~~~~~~~l~~~~~~L~pgG~l~i~~ 151 (263)
T 3pfg_A 126 GQAELDAALERFAAHVLPDGVVVVEP 151 (263)
T ss_dssp HHHHHHHHHHHHHHTEEEEEEEEECC
T ss_pred CHHHHHHHHHHHHHhcCCCcEEEEEe
Confidence 456789999999999999999963
No 31
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.52 E-value=1.3e-13 Score=140.88 Aligned_cols=105 Identities=14% Similarity=0.266 Sum_probs=89.8
Q ss_pred cCCCCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHh----CCCcEEEEecCCCCCCCCCCeeEEEeccc
Q 039518 226 SAGVFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALER----GIGAMISALSTKQLPYPSSSFEMVHCSRC 301 (617)
Q Consensus 226 ~~~g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~er----g~~~~~~~~d~~~Lpf~d~sFDlV~~s~~ 301 (617)
..++.+|||||||+|.++..+++.......++++|+++.+++.|+++ +.++.+.++|+.+++++ ++||+|++..+
T Consensus 20 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~-~~fD~v~~~~~ 98 (284)
T 3gu3_A 20 ITKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLPYDSEFLEGDATEIELN-DKYDIAICHAF 98 (284)
T ss_dssp CCSCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHSSSSEEEEEESCTTTCCCS-SCEEEEEEESC
T ss_pred cCCCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEcchhhcCcC-CCeeEEEECCh
Confidence 34667899999999999999998743323788899999999999876 34688889999998874 68999999988
Q ss_pred ccccccchHHHHHHHHHhccCCeEEEEEeCC
Q 039518 302 RVDWHANDGILLKEVDRVLRPNGYFVYSAPP 332 (617)
Q Consensus 302 l~h~~~d~~~~L~el~RvLrPGG~Liis~p~ 332 (617)
++|+. ++..+++++.++|||||++++.++.
T Consensus 99 l~~~~-~~~~~l~~~~~~LkpgG~l~~~~~~ 128 (284)
T 3gu3_A 99 LLHMT-TPETMLQKMIHSVKKGGKIICFEPH 128 (284)
T ss_dssp GGGCS-SHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred hhcCC-CHHHHHHHHHHHcCCCCEEEEEecc
Confidence 77765 8899999999999999999999875
No 32
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.52 E-value=1.6e-13 Score=133.88 Aligned_cols=131 Identities=14% Similarity=0.089 Sum_probs=98.7
Q ss_pred CCCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHhCC----------CcEEEEecCCCCCCCCCCeeEEE
Q 039518 228 GVFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALERGI----------GAMISALSTKQLPYPSSSFEMVH 297 (617)
Q Consensus 228 ~g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~erg~----------~~~~~~~d~~~Lpf~d~sFDlV~ 297 (617)
++.+|||||||+|.++..|++++.. ..++++|+++.+++.|+++.. ++.+..+|+..+++++++||+|+
T Consensus 29 ~~~~vLDiGcG~G~~~~~l~~~~~~-~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~ 107 (219)
T 3jwg_A 29 NAKKVIDLGCGEGNLLSLLLKDKSF-EQITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLFQSSLVYRDKRFSGYDAAT 107 (219)
T ss_dssp TCCEEEEETCTTCHHHHHHHTSTTC-CEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEEECCSSSCCGGGTTCSEEE
T ss_pred CCCEEEEecCCCCHHHHHHHhcCCC-CEEEEEECCHHHHHHHHHHHHhhccccccCcceEEEeCcccccccccCCCCEEE
Confidence 3457999999999999999987642 378899999999999988632 57888899988888888999999
Q ss_pred ecccccccccch--HHHHHHHHHhccCCeEEEEEeCCCCCC-----C-------CCChh--hHHH----HHHHHHHcCce
Q 039518 298 CSRCRVDWHAND--GILLKEVDRVLRPNGYFVYSAPPAYRK-----D-------KDYPL--IWDK----LVNLTTAMCWK 357 (617)
Q Consensus 298 ~s~~l~h~~~d~--~~~L~el~RvLrPGG~Liis~p~~~~~-----~-------~~~~~--~W~~----le~La~~~gw~ 357 (617)
|+.+++|+. ++ ..+++++.++|||||.++.+.. ..+. . ..+.. .-++ +.+++++.||+
T Consensus 108 ~~~~l~~~~-~~~~~~~l~~~~~~LkpgG~~i~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~Gf~ 185 (219)
T 3jwg_A 108 VIEVIEHLD-ENRLQAFEKVLFEFTRPQTVIVSTPN-KEYNFHYGNLFEGNLRHRDHRFEWTRKEFQTWAVKVAEKYGYS 185 (219)
T ss_dssp EESCGGGCC-HHHHHHHHHHHHTTTCCSEEEEEEEB-GGGGGCCCCT-----GGGCCTTSBCHHHHHHHHHHHHHHHTEE
T ss_pred EHHHHHhCC-HHHHHHHHHHHHHhhCCCEEEEEccc-hhhhhhhcccCcccccccCceeeecHHHHHHHHHHHHHHCCcE
Confidence 999888875 44 6899999999999996655432 2110 0 01100 1122 44889999998
Q ss_pred EEEE
Q 039518 358 LIAR 361 (617)
Q Consensus 358 ~v~~ 361 (617)
+...
T Consensus 186 v~~~ 189 (219)
T 3jwg_A 186 VRFL 189 (219)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 8765
No 33
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.52 E-value=2.7e-13 Score=128.14 Aligned_cols=125 Identities=14% Similarity=0.139 Sum_probs=103.5
Q ss_pred CCCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHhCCCcEEEEecCCCCCCCCCCeeEEEec-ccccccc
Q 039518 228 GVFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALERGIGAMISALSTKQLPYPSSSFEMVHCS-RCRVDWH 306 (617)
Q Consensus 228 ~g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~erg~~~~~~~~d~~~Lpf~d~sFDlV~~s-~~l~h~~ 306 (617)
++.+|||+|||+|.++..+++.+. .++++|+++.+++.++++..++.+...|+..+++++++||+|+++ .++++..
T Consensus 46 ~~~~vLdiG~G~G~~~~~l~~~~~---~v~~~D~~~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~~D~i~~~~~~~~~~~ 122 (195)
T 3cgg_A 46 RGAKILDAGCGQGRIGGYLSKQGH---DVLGTDLDPILIDYAKQDFPEARWVVGDLSVDQISETDFDLIVSAGNVMGFLA 122 (195)
T ss_dssp TTCEEEEETCTTTHHHHHHHHTTC---EEEEEESCHHHHHHHHHHCTTSEEEECCTTTSCCCCCCEEEEEECCCCGGGSC
T ss_pred CCCeEEEECCCCCHHHHHHHHCCC---cEEEEcCCHHHHHHHHHhCCCCcEEEcccccCCCCCCceeEEEECCcHHhhcC
Confidence 566799999999999999998864 678889999999999998877899999998888888999999998 4555543
Q ss_pred -cchHHHHHHHHHhccCCeEEEEEeCCCCCCCCCChhhHHHHHHHHHHcCceEEEE
Q 039518 307 -ANDGILLKEVDRVLRPNGYFVYSAPPAYRKDKDYPLIWDKLVNLTTAMCWKLIAR 361 (617)
Q Consensus 307 -~d~~~~L~el~RvLrPGG~Liis~p~~~~~~~~~~~~W~~le~La~~~gw~~v~~ 361 (617)
++...++.++.++|+|||.+++..+.... .. ...+.+++++.||+++..
T Consensus 123 ~~~~~~~l~~~~~~l~~~G~l~~~~~~~~~----~~--~~~~~~~l~~~Gf~~~~~ 172 (195)
T 3cgg_A 123 EDGREPALANIHRALGADGRAVIGFGAGRG----WV--FGDFLEVAERVGLELENA 172 (195)
T ss_dssp HHHHHHHHHHHHHHEEEEEEEEEEEETTSS----CC--HHHHHHHHHHHTEEEEEE
T ss_pred hHHHHHHHHHHHHHhCCCCEEEEEeCCCCC----cC--HHHHHHHHHHcCCEEeee
Confidence 34578999999999999999998764321 11 556888899999998764
No 34
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.52 E-value=1.1e-13 Score=136.60 Aligned_cols=129 Identities=13% Similarity=0.071 Sum_probs=102.2
Q ss_pred CeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHhCC------CcEEEEecCCCCCCCCCCeeEEEeccccc
Q 039518 230 FQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALERGI------GAMISALSTKQLPYPSSSFEMVHCSRCRV 303 (617)
Q Consensus 230 ~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~erg~------~~~~~~~d~~~Lpf~d~sFDlV~~s~~l~ 303 (617)
.+|||||||+|.++..|++.+. .++++|+++.+++.|+++.. ++.+..+|+..++ ++++||+|+++.+++
T Consensus 68 ~~vLDiGcG~G~~~~~l~~~~~---~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-~~~~fD~v~~~~~l~ 143 (235)
T 3lcc_A 68 GRALVPGCGGGHDVVAMASPER---FVVGLDISESALAKANETYGSSPKAEYFSFVKEDVFTWR-PTELFDLIFDYVFFC 143 (235)
T ss_dssp EEEEEETCTTCHHHHHHCBTTE---EEEEECSCHHHHHHHHHHHTTSGGGGGEEEECCCTTTCC-CSSCEEEEEEESSTT
T ss_pred CCEEEeCCCCCHHHHHHHhCCC---eEEEEECCHHHHHHHHHHhhccCCCcceEEEECchhcCC-CCCCeeEEEEChhhh
Confidence 4799999999999999988654 68889999999999988743 3788889988877 456899999998887
Q ss_pred ccc-cchHHHHHHHHHhccCCeEEEEEeCCCCCCC--CCChhhHHHHHHHHHHcCceEEEEe
Q 039518 304 DWH-ANDGILLKEVDRVLRPNGYFVYSAPPAYRKD--KDYPLIWDKLVNLTTAMCWKLIARK 362 (617)
Q Consensus 304 h~~-~d~~~~L~el~RvLrPGG~Liis~p~~~~~~--~~~~~~W~~le~La~~~gw~~v~~~ 362 (617)
++. ++...++.++.++|||||++++...+..... +......+.+.++++..||+++...
T Consensus 144 ~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~ 205 (235)
T 3lcc_A 144 AIEPEMRPAWAKSMYELLKPDGELITLMYPITDHVGGPPYKVDVSTFEEVLVPIGFKAVSVE 205 (235)
T ss_dssp TSCGGGHHHHHHHHHHHEEEEEEEEEEECCCSCCCSCSSCCCCHHHHHHHHGGGTEEEEEEE
T ss_pred cCCHHHHHHHHHHHHHHCCCCcEEEEEEecccccCCCCCccCCHHHHHHHHHHcCCeEEEEE
Confidence 775 3678899999999999999999875432211 1111224668999999999988743
No 35
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.52 E-value=7.2e-14 Score=142.14 Aligned_cols=131 Identities=15% Similarity=0.127 Sum_probs=104.7
Q ss_pred CCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHh----C--CCcEEEEecCCCCC-CCCCCeeEEEeccc
Q 039518 229 VFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALER----G--IGAMISALSTKQLP-YPSSSFEMVHCSRC 301 (617)
Q Consensus 229 g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~er----g--~~~~~~~~d~~~Lp-f~d~sFDlV~~s~~ 301 (617)
+.+|||||||+|.++..+++.+. .++++|+++.+++.|+++ + .++.+..+|+..++ +++++||+|+++.+
T Consensus 69 ~~~vLDiGcG~G~~~~~l~~~~~---~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~~ 145 (285)
T 4htf_A 69 KLRVLDAGGGEGQTAIKMAERGH---QVILCDLSAQMIDRAKQAAEAKGVSDNMQFIHCAAQDVASHLETPVDLILFHAV 145 (285)
T ss_dssp CCEEEEETCTTCHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHHC-CCGGGEEEEESCGGGTGGGCSSCEEEEEEESC
T ss_pred CCEEEEeCCcchHHHHHHHHCCC---EEEEEECCHHHHHHHHHHHHhcCCCcceEEEEcCHHHhhhhcCCCceEEEECch
Confidence 46799999999999999999865 678889999999999876 3 34778889998887 78899999999988
Q ss_pred ccccccchHHHHHHHHHhccCCeEEEEEeCCCCC-------------------------CCCCChhhHHHHHHHHHHcCc
Q 039518 302 RVDWHANDGILLKEVDRVLRPNGYFVYSAPPAYR-------------------------KDKDYPLIWDKLVNLTTAMCW 356 (617)
Q Consensus 302 l~h~~~d~~~~L~el~RvLrPGG~Liis~p~~~~-------------------------~~~~~~~~W~~le~La~~~gw 356 (617)
++|+. ++..+|+++.++|||||++++..+.... ........-+++.+++++.||
T Consensus 146 l~~~~-~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf 224 (285)
T 4htf_A 146 LEWVA-DPRSVLQTLWSVLRPGGVLSLMFYNAHGLLMHNMVAGNFDYVQAGMPKKKKRTLSPDYPRDPTQVYLWLEEAGW 224 (285)
T ss_dssp GGGCS-CHHHHHHHHHHTEEEEEEEEEEEEBHHHHHHHHHHTTCHHHHHTTCCCC----CCCSCCBCHHHHHHHHHHTTC
T ss_pred hhccc-CHHHHHHHHHHHcCCCeEEEEEEeCCchHHHHHHHhcCHHHHhhhccccccccCCCCCCCCHHHHHHHHHHCCC
Confidence 87775 8899999999999999999998752100 000111123568999999999
Q ss_pred eEEEEee
Q 039518 357 KLIARKI 363 (617)
Q Consensus 357 ~~v~~~~ 363 (617)
+++....
T Consensus 225 ~v~~~~~ 231 (285)
T 4htf_A 225 QIMGKTG 231 (285)
T ss_dssp EEEEEEE
T ss_pred ceeeeee
Confidence 9887543
No 36
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.51 E-value=6.9e-14 Score=130.92 Aligned_cols=128 Identities=14% Similarity=0.142 Sum_probs=101.2
Q ss_pred CCCCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHhCCCcEEEEecCCCCCCCCCCeeEEEecccccccc
Q 039518 227 AGVFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALERGIGAMISALSTKQLPYPSSSFEMVHCSRCRVDWH 306 (617)
Q Consensus 227 ~~g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~erg~~~~~~~~d~~~Lpf~d~sFDlV~~s~~l~h~~ 306 (617)
.++.+|||+|||+|.++..+++.+ . .++++|+++.+++.|+++..++.+...| +++++++||+|+++.+++|+.
T Consensus 16 ~~~~~vLDiG~G~G~~~~~l~~~~--~-~v~~vD~s~~~~~~a~~~~~~v~~~~~d---~~~~~~~~D~v~~~~~l~~~~ 89 (170)
T 3i9f_A 16 GKKGVIVDYGCGNGFYCKYLLEFA--T-KLYCIDINVIALKEVKEKFDSVITLSDP---KEIPDNSVDFILFANSFHDMD 89 (170)
T ss_dssp SCCEEEEEETCTTCTTHHHHHTTE--E-EEEEECSCHHHHHHHHHHCTTSEEESSG---GGSCTTCEEEEEEESCSTTCS
T ss_pred CCCCeEEEECCCCCHHHHHHHhhc--C-eEEEEeCCHHHHHHHHHhCCCcEEEeCC---CCCCCCceEEEEEccchhccc
Confidence 455679999999999999999876 2 7889999999999999987678888777 778889999999999888775
Q ss_pred cchHHHHHHHHHhccCCeEEEEEeCCCCCCCCC----ChhhHHHHHHHHHHcCceEEEEee
Q 039518 307 ANDGILLKEVDRVLRPNGYFVYSAPPAYRKDKD----YPLIWDKLVNLTTAMCWKLIARKI 363 (617)
Q Consensus 307 ~d~~~~L~el~RvLrPGG~Liis~p~~~~~~~~----~~~~W~~le~La~~~gw~~v~~~~ 363 (617)
++..+++++.|+|||||++++.+......... ....-+++.++++ ||+.+....
T Consensus 90 -~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--Gf~~~~~~~ 147 (170)
T 3i9f_A 90 -DKQHVISEVKRILKDDGRVIIIDWRKENTGIGPPLSIRMDEKDYMGWFS--NFVVEKRFN 147 (170)
T ss_dssp -CHHHHHHHHHHHEEEEEEEEEEEECSSCCSSSSCGGGCCCHHHHHHHTT--TEEEEEEEC
T ss_pred -CHHHHHHHHHHhcCCCCEEEEEEcCccccccCchHhhhcCHHHHHHHHh--CcEEEEccC
Confidence 89999999999999999999987533221111 0111344777777 999887543
No 37
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=99.51 E-value=2.5e-14 Score=144.25 Aligned_cols=140 Identities=14% Similarity=0.108 Sum_probs=106.9
Q ss_pred HHHHHHHhhhhhccCCcccCCCCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHhCCCcEEEEecCCCCC
Q 039518 208 EYIQRLGNMMTNETGNLRSAGVFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALERGIGAMISALSTKQLP 287 (617)
Q Consensus 208 ~Y~~~L~~~L~~~~~~lr~~~g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~erg~~~~~~~~d~~~Lp 287 (617)
.+.+.+.+.++ ..++.+|||||||+|.++..+++.+. .++++|+++.+++.|+++. ++.+..+|++.+|
T Consensus 21 ~~~~~l~~~~~-------~~~~~~vLDiGcG~G~~~~~l~~~~~---~v~gvD~s~~~~~~a~~~~-~~~~~~~d~~~~~ 89 (261)
T 3ege_A 21 RIVNAIINLLN-------LPKGSVIADIGAGTGGYSVALANQGL---FVYAVEPSIVMRQQAVVHP-QVEWFTGYAENLA 89 (261)
T ss_dssp HHHHHHHHHHC-------CCTTCEEEEETCTTSHHHHHHHTTTC---EEEEECSCHHHHHSSCCCT-TEEEECCCTTSCC
T ss_pred HHHHHHHHHhC-------CCCCCEEEEEcCcccHHHHHHHhCCC---EEEEEeCCHHHHHHHHhcc-CCEEEECchhhCC
Confidence 44555555543 23556799999999999999998654 6788899999999887766 7889999999999
Q ss_pred CCCCCeeEEEecccccccccchHHHHHHHHHhccCCeEEEEEeCCCCCCC-CC----Ch----------hhHHHHHHHHH
Q 039518 288 YPSSSFEMVHCSRCRVDWHANDGILLKEVDRVLRPNGYFVYSAPPAYRKD-KD----YP----------LIWDKLVNLTT 352 (617)
Q Consensus 288 f~d~sFDlV~~s~~l~h~~~d~~~~L~el~RvLrPGG~Liis~p~~~~~~-~~----~~----------~~W~~le~La~ 352 (617)
+++++||+|++..+++|+. ++..+++++.|+|| ||++++.++...... .. .. ..-+.+. +++
T Consensus 90 ~~~~~fD~v~~~~~l~~~~-~~~~~l~~~~~~Lk-gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~ 166 (261)
T 3ege_A 90 LPDKSVDGVISILAIHHFS-HLEKSFQEMQRIIR-DGTIVLLTFDIRLAQRIWLYDYFPFLWEDALRFLPLDEQIN-LLQ 166 (261)
T ss_dssp SCTTCBSEEEEESCGGGCS-SHHHHHHHHHHHBC-SSCEEEEEECGGGCCCCGGGGTCHHHHHHHHTSCCHHHHHH-HHH
T ss_pred CCCCCEeEEEEcchHhhcc-CHHHHHHHHHHHhC-CcEEEEEEcCCchhHHHHHHHHHHHHhhhhhhhCCCHHHHH-HHH
Confidence 9999999999999888874 89999999999999 998888765321111 00 00 0112366 889
Q ss_pred HcCceEEEE
Q 039518 353 AMCWKLIAR 361 (617)
Q Consensus 353 ~~gw~~v~~ 361 (617)
++||+.+..
T Consensus 167 ~aGF~~v~~ 175 (261)
T 3ege_A 167 ENTKRRVEA 175 (261)
T ss_dssp HHHCSEEEE
T ss_pred HcCCCceeE
Confidence 999987764
No 38
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.51 E-value=5.3e-14 Score=150.49 Aligned_cols=136 Identities=24% Similarity=0.199 Sum_probs=107.0
Q ss_pred cCCCCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHh---------C----CCcEEEEecCCCC------
Q 039518 226 SAGVFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALER---------G----IGAMISALSTKQL------ 286 (617)
Q Consensus 226 ~~~g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~er---------g----~~~~~~~~d~~~L------ 286 (617)
..++.+|||||||+|.++..|++.......++++|+++.+++.|+++ | .++.+..+|+..+
T Consensus 81 ~~~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~~~ 160 (383)
T 4fsd_A 81 SLEGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAEPE 160 (383)
T ss_dssp GGTTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCBSC
T ss_pred CCCCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhcccC
Confidence 45778999999999999999987621122788899999999999986 4 5788999999887
Q ss_pred CCCCCCeeEEEecccccccccchHHHHHHHHHhccCCeEEEEEeCCCCCCCCC--------------ChhhHHHHHHHHH
Q 039518 287 PYPSSSFEMVHCSRCRVDWHANDGILLKEVDRVLRPNGYFVYSAPPAYRKDKD--------------YPLIWDKLVNLTT 352 (617)
Q Consensus 287 pf~d~sFDlV~~s~~l~h~~~d~~~~L~el~RvLrPGG~Liis~p~~~~~~~~--------------~~~~W~~le~La~ 352 (617)
++++++||+|+++.+++++. ++..+|+++.|+|||||+|+++++........ ....++++.++++
T Consensus 161 ~~~~~~fD~V~~~~~l~~~~-d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~ 239 (383)
T 4fsd_A 161 GVPDSSVDIVISNCVCNLST-NKLALFKEIHRVLRDGGELYFSDVYADRRLSEAAQQDPILYGECLGGALYLEDFRRLVA 239 (383)
T ss_dssp CCCTTCEEEEEEESCGGGCS-CHHHHHHHHHHHEEEEEEEEEEEEEESSCCCHHHHHCHHHHHTTCTTCCBHHHHHHHHH
T ss_pred CCCCCCEEEEEEccchhcCC-CHHHHHHHHHHHcCCCCEEEEEEeccccccCHhHhhhHHHhhcccccCCCHHHHHHHHH
Confidence 89999999999998777665 89999999999999999999986532211100 0012466899999
Q ss_pred HcCceEEEEe
Q 039518 353 AMCWKLIARK 362 (617)
Q Consensus 353 ~~gw~~v~~~ 362 (617)
+.||+.+...
T Consensus 240 ~aGF~~v~~~ 249 (383)
T 4fsd_A 240 EAGFRDVRLV 249 (383)
T ss_dssp HTTCCCEEEE
T ss_pred HCCCceEEEE
Confidence 9999877543
No 39
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.51 E-value=1e-13 Score=140.58 Aligned_cols=131 Identities=11% Similarity=0.034 Sum_probs=98.9
Q ss_pred CCCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHhC----------------------CCcEEEEecCCC
Q 039518 228 GVFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALERG----------------------IGAMISALSTKQ 285 (617)
Q Consensus 228 ~g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~erg----------------------~~~~~~~~d~~~ 285 (617)
++.+|||+|||+|..+.+|+++|. .|+++|+|+.+++.|+++. .++.+.++|+..
T Consensus 68 ~~~~vLD~GCG~G~~~~~La~~G~---~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~~~ 144 (252)
T 2gb4_A 68 SGLRVFFPLCGKAIEMKWFADRGH---TVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSIFD 144 (252)
T ss_dssp CSCEEEETTCTTCTHHHHHHHTTC---EEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCTTT
T ss_pred CCCeEEEeCCCCcHHHHHHHHCCC---eEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECcccc
Confidence 456799999999999999999976 6788899999999997653 457889999999
Q ss_pred CCCCC-CCeeEEEeccccccccc-chHHHHHHHHHhccCCeEEEEEeCCCC---CCCCCChhhHHHHHHHHHHcCceEEE
Q 039518 286 LPYPS-SSFEMVHCSRCRVDWHA-NDGILLKEVDRVLRPNGYFVYSAPPAY---RKDKDYPLIWDKLVNLTTAMCWKLIA 360 (617)
Q Consensus 286 Lpf~d-~sFDlV~~s~~l~h~~~-d~~~~L~el~RvLrPGG~Liis~p~~~---~~~~~~~~~W~~le~La~~~gw~~v~ 360 (617)
+++++ ++||+|++..+++++.. +...+++++.|+|||||++++.+.... ...+.....-+++.+++.. +|+++.
T Consensus 145 l~~~~~~~FD~V~~~~~l~~l~~~~~~~~l~~~~~~LkpGG~l~l~~~~~~~~~~~g~~~~~~~~el~~~l~~-~f~v~~ 223 (252)
T 2gb4_A 145 LPRANIGKFDRIWDRGALVAINPGDHDRYADIILSLLRKEFQYLVAVLSYDPTKHAGPPFYVPSAELKRLFGT-KCSMQC 223 (252)
T ss_dssp GGGGCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEEEEEEEEEEECCTTSCCCSSCCCCHHHHHHHHTT-TEEEEE
T ss_pred CCcccCCCEEEEEEhhhhhhCCHHHHHHHHHHHHHHcCCCeEEEEEEEecCCccCCCCCCCCCHHHHHHHhhC-CeEEEE
Confidence 98764 89999999887777763 456799999999999999975432111 1111111123567777766 588776
Q ss_pred Ee
Q 039518 361 RK 362 (617)
Q Consensus 361 ~~ 362 (617)
..
T Consensus 224 ~~ 225 (252)
T 2gb4_A 224 LE 225 (252)
T ss_dssp EE
T ss_pred Ee
Confidence 43
No 40
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.50 E-value=1.4e-13 Score=142.07 Aligned_cols=135 Identities=12% Similarity=0.028 Sum_probs=103.2
Q ss_pred cCCCCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHhC----CC--cEEEEecCCCCCCCCCCeeEEEec
Q 039518 226 SAGVFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALERG----IG--AMISALSTKQLPYPSSSFEMVHCS 299 (617)
Q Consensus 226 ~~~g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~erg----~~--~~~~~~d~~~Lpf~d~sFDlV~~s 299 (617)
+.++.+|||||||+|.++..|+........++++|+++.+++.|+++. .. +.+..+|+..++++ ++||+|+++
T Consensus 116 l~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~-~~fD~v~~~ 194 (305)
T 3ocj_A 116 LRPGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGHALAGQITLHRQDAWKLDTR-EGYDLLTSN 194 (305)
T ss_dssp CCTTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEECCGGGCCCC-SCEEEEECC
T ss_pred CCCCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhcCCCCceEEEECchhcCCcc-CCeEEEEEC
Confidence 356778999999999999999633222347889999999999998873 22 78899999999987 899999999
Q ss_pred ccccccccchHH---HHHHHHHhccCCeEEEEEeCCCCCC----CC----C----------------------ChhhHHH
Q 039518 300 RCRVDWHANDGI---LLKEVDRVLRPNGYFVYSAPPAYRK----DK----D----------------------YPLIWDK 346 (617)
Q Consensus 300 ~~l~h~~~d~~~---~L~el~RvLrPGG~Liis~p~~~~~----~~----~----------------------~~~~W~~ 346 (617)
.+++|+. ++.. +++++.++|||||+++++....... .. . ....-++
T Consensus 195 ~~~~~~~-~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (305)
T 3ocj_A 195 GLNIYEP-DDARVTELYRRFWQALKPGGALVTSFLTPPPALSPDSPWDMQAIDPHDLQLQQLVFTRLIQPRWNALRTHAQ 273 (305)
T ss_dssp SSGGGCC-CHHHHHHHHHHHHHHEEEEEEEEEECCCCCTTTCTTCCCCGGGSCHHHHHHHHHHHHHTTCCSCCCCCCHHH
T ss_pred ChhhhcC-CHHHHHHHHHHHHHhcCCCeEEEEEecCCCCcccccccceeeccccchhhhhhhHHHHHHhhhhhccCCHHH
Confidence 8888876 4544 7999999999999999987422110 00 0 0012456
Q ss_pred HHHHHHHcCceEEEEe
Q 039518 347 LVNLTTAMCWKLIARK 362 (617)
Q Consensus 347 le~La~~~gw~~v~~~ 362 (617)
+.+++++.||+.+...
T Consensus 274 ~~~~l~~aGF~~v~~~ 289 (305)
T 3ocj_A 274 TRAQLEEAGFTDLRFE 289 (305)
T ss_dssp HHHHHHHTTCEEEEEE
T ss_pred HHHHHHHCCCEEEEEE
Confidence 8899999999998765
No 41
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.49 E-value=1.4e-13 Score=133.51 Aligned_cols=129 Identities=19% Similarity=0.236 Sum_probs=100.1
Q ss_pred CCCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHhCCCcEEEEecCCCC---CCCC-CCeeEEEeccccc
Q 039518 228 GVFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALERGIGAMISALSTKQL---PYPS-SSFEMVHCSRCRV 303 (617)
Q Consensus 228 ~g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~erg~~~~~~~~d~~~L---pf~d-~sFDlV~~s~~l~ 303 (617)
++.+|||||||+|.++..+++.+. .++++|+++.+++.|+++ ..+.+...+...+ ++.. ++||+|+++.+++
T Consensus 52 ~~~~vLdiG~G~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~-~~~~~~~~~~~~~~~~~~~~~~~fD~v~~~~~l~ 127 (227)
T 3e8s_A 52 QPERVLDLGCGEGWLLRALADRGI---EAVGVDGDRTLVDAARAA-GAGEVHLASYAQLAEAKVPVGKDYDLICANFALL 127 (227)
T ss_dssp CCSEEEEETCTTCHHHHHHHTTTC---EEEEEESCHHHHHHHHHT-CSSCEEECCHHHHHTTCSCCCCCEEEEEEESCCC
T ss_pred CCCEEEEeCCCCCHHHHHHHHCCC---EEEEEcCCHHHHHHHHHh-cccccchhhHHhhcccccccCCCccEEEECchhh
Confidence 346799999999999999999865 678889999999999998 4566777776555 5444 4599999998776
Q ss_pred ccccchHHHHHHHHHhccCCeEEEEEeCCCCCCCCC-----------------------ChhhHHHHHHHHHHcCceEEE
Q 039518 304 DWHANDGILLKEVDRVLRPNGYFVYSAPPAYRKDKD-----------------------YPLIWDKLVNLTTAMCWKLIA 360 (617)
Q Consensus 304 h~~~d~~~~L~el~RvLrPGG~Liis~p~~~~~~~~-----------------------~~~~W~~le~La~~~gw~~v~ 360 (617)
..++..+++++.++|||||+++++++........ .....+++.++++++||+++.
T Consensus 128 --~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~ 205 (227)
T 3e8s_A 128 --HQDIIELLSAMRTLLVPGGALVIQTLHPWSVADGDYQDGWREESFAGFAGDWQPMPWYFRTLASWLNALDMAGLRLVS 205 (227)
T ss_dssp --SSCCHHHHHHHHHTEEEEEEEEEEECCTTTTCTTCCSCEEEEECCTTSSSCCCCEEEEECCHHHHHHHHHHTTEEEEE
T ss_pred --hhhHHHHHHHHHHHhCCCeEEEEEecCccccCccccccccchhhhhccccCcccceEEEecHHHHHHHHHHcCCeEEE
Confidence 4589999999999999999999998743221110 001246689999999999887
Q ss_pred Ee
Q 039518 361 RK 362 (617)
Q Consensus 361 ~~ 362 (617)
..
T Consensus 206 ~~ 207 (227)
T 3e8s_A 206 LQ 207 (227)
T ss_dssp EE
T ss_pred Ee
Confidence 43
No 42
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.49 E-value=1.9e-13 Score=133.93 Aligned_cols=124 Identities=17% Similarity=0.197 Sum_probs=100.7
Q ss_pred CCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHhCCCcEEEEecCCCCCCCCCCeeEEEecccccccccc
Q 039518 229 VFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALERGIGAMISALSTKQLPYPSSSFEMVHCSRCRVDWHAN 308 (617)
Q Consensus 229 g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~erg~~~~~~~~d~~~Lpf~d~sFDlV~~s~~l~h~~~d 308 (617)
+.+|||||||+|.++..++++ +++|+++.+++.|+++ ++.+..+++..+++++++||+|++..+++|+. +
T Consensus 48 ~~~vLDiG~G~G~~~~~l~~~-------~~vD~s~~~~~~a~~~--~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~-~ 117 (219)
T 1vlm_A 48 EGRGVEIGVGTGRFAVPLKIK-------IGVEPSERMAEIARKR--GVFVLKGTAENLPLKDESFDFALMVTTICFVD-D 117 (219)
T ss_dssp SSCEEEETCTTSTTHHHHTCC-------EEEESCHHHHHHHHHT--TCEEEECBTTBCCSCTTCEEEEEEESCGGGSS-C
T ss_pred CCcEEEeCCCCCHHHHHHHHH-------hccCCCHHHHHHHHhc--CCEEEEcccccCCCCCCCeeEEEEcchHhhcc-C
Confidence 567999999999999999876 5679999999999988 57788889989998889999999998887765 8
Q ss_pred hHHHHHHHHHhccCCeEEEEEeCCCCCC---------------CCCChhhHHHHHHHHHHcCceEEEEe
Q 039518 309 DGILLKEVDRVLRPNGYFVYSAPPAYRK---------------DKDYPLIWDKLVNLTTAMCWKLIARK 362 (617)
Q Consensus 309 ~~~~L~el~RvLrPGG~Liis~p~~~~~---------------~~~~~~~W~~le~La~~~gw~~v~~~ 362 (617)
+..+|+++.++|+|||.++++.+..... ........+++.+++++.||+++...
T Consensus 118 ~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Gf~~~~~~ 186 (219)
T 1vlm_A 118 PERALKEAYRILKKGGYLIVGIVDRESFLGREYEKNKEKSVFYKNARFFSTEELMDLMRKAGFEEFKVV 186 (219)
T ss_dssp HHHHHHHHHHHEEEEEEEEEEEECSSSHHHHHHHHTTTC-CCSTTCCCCCHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHHcCCCcEEEEEEeCCccHHHHHHHHHhcCcchhcccccCCHHHHHHHHHHCCCeEEEEe
Confidence 8999999999999999999987643210 00011124568999999999988744
No 43
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.49 E-value=1.6e-13 Score=138.48 Aligned_cols=137 Identities=18% Similarity=0.238 Sum_probs=106.6
Q ss_pred ccCCCCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHh----CC-CcEEEEecCCCCCCCCCCeeEEEec
Q 039518 225 RSAGVFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALER----GI-GAMISALSTKQLPYPSSSFEMVHCS 299 (617)
Q Consensus 225 r~~~g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~er----g~-~~~~~~~d~~~Lpf~d~sFDlV~~s 299 (617)
...++.+|||||||+|.++..++++... ..++++|+++.+++.|+++ +. ++.+...|+..+++++++||+|+++
T Consensus 34 ~~~~~~~vLDiG~G~G~~~~~l~~~~~~-~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~ 112 (276)
T 3mgg_A 34 VYPPGAKVLEAGCGIGAQTVILAKNNPD-AEITSIDISPESLEKARENTEKNGIKNVKFLQANIFSLPFEDSSFDHIFVC 112 (276)
T ss_dssp CCCTTCEEEETTCTTSHHHHHHHHHCTT-SEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGCCSCTTCEEEEEEE
T ss_pred cCCCCCeEEEecCCCCHHHHHHHHhCCC-CEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEcccccCCCCCCCeeEEEEe
Confidence 3456788999999999999999987432 2788899999999998876 33 5788889999999999999999999
Q ss_pred ccccccccchHHHHHHHHHhccCCeEEEEEeCCCCCC--CCCCh---hhH-----------------HHHHHHHHHcCce
Q 039518 300 RCRVDWHANDGILLKEVDRVLRPNGYFVYSAPPAYRK--DKDYP---LIW-----------------DKLVNLTTAMCWK 357 (617)
Q Consensus 300 ~~l~h~~~d~~~~L~el~RvLrPGG~Liis~p~~~~~--~~~~~---~~W-----------------~~le~La~~~gw~ 357 (617)
.+++|+. ++..++.++.++|||||++++.++..... .+... ..| ..+..++++.||+
T Consensus 113 ~~l~~~~-~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~ 191 (276)
T 3mgg_A 113 FVLEHLQ-SPEEALKSLKKVLKPGGTITVIEGDHGSCYFHPEGKKAIEAWNCLIRVQAYMKGNSLVGRQIYPLLQESGFE 191 (276)
T ss_dssp SCGGGCS-CHHHHHHHHHHHEEEEEEEEEEEECGGGCEEESCCHHHHHHHHHHHHHHHHTTCCTTGGGGHHHHHHHTTCE
T ss_pred chhhhcC-CHHHHHHHHHHHcCCCcEEEEEEcCCCCceECCCcHHHHHHHHHHHHHHHhcCCCcchHHHHHHHHHHCCCC
Confidence 8887776 78899999999999999999987532110 01111 111 2377789999999
Q ss_pred EEEEee
Q 039518 358 LIARKI 363 (617)
Q Consensus 358 ~v~~~~ 363 (617)
.+....
T Consensus 192 ~v~~~~ 197 (276)
T 3mgg_A 192 KIRVEP 197 (276)
T ss_dssp EEEEEE
T ss_pred eEEEee
Confidence 887543
No 44
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=99.49 E-value=1.5e-13 Score=140.99 Aligned_cols=133 Identities=11% Similarity=0.064 Sum_probs=90.8
Q ss_pred CCCCeEEEECCCCcHHHHHh----ccCCCcE-EEeeecCCcHHHHHHHHHh-----CC-CcEE--EEecCCCCC------
Q 039518 227 AGVFQVLDVGCGVASFSAFL----LPLDIQT-MSFAPKDGHENQIQFALER-----GI-GAMI--SALSTKQLP------ 287 (617)
Q Consensus 227 ~~g~rVLDIGCGtG~~a~~L----a~~gv~~-v~v~~iDis~~~lq~A~er-----g~-~~~~--~~~d~~~Lp------ 287 (617)
.++.+|||||||+|.++..+ +.+...+ +.++++|+|+.|++.|+++ ++ ++.+ ..++.+.++
T Consensus 51 ~~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml~~a~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 130 (292)
T 2aot_A 51 KSEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKTSNLENVKFAWHKETSSEYQSRMLEK 130 (292)
T ss_dssp CSEEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHHHHHHHHHHTCSSCTTEEEEEECSCHHHHHHHHHTT
T ss_pred CCCCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHHHHHHHHHHHhccCCCcceEEEEecchhhhhhhhccc
Confidence 46778999999999766533 3322222 2458899999999998876 22 2333 334444443
Q ss_pred CCCCCeeEEEecccccccccchHHHHHHHHHhccCCeEEEEEeCCCCCC-------------C--CCChhhHHHHHHHHH
Q 039518 288 YPSSSFEMVHCSRCRVDWHANDGILLKEVDRVLRPNGYFVYSAPPAYRK-------------D--KDYPLIWDKLVNLTT 352 (617)
Q Consensus 288 f~d~sFDlV~~s~~l~h~~~d~~~~L~el~RvLrPGG~Liis~p~~~~~-------------~--~~~~~~W~~le~La~ 352 (617)
+++++||+|+++.+++|+. |+..+|++++|+|||||++++..+..... . ......-.++.++++
T Consensus 131 ~~~~~fD~V~~~~~l~~~~-d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 209 (292)
T 2aot_A 131 KELQKWDFIHMIQMLYYVK-DIPATLKFFHSLLGTNAKMLIIVVSGSSGWDKLWKKYGSRFPQDDLCQYITSDDLTQMLD 209 (292)
T ss_dssp TCCCCEEEEEEESCGGGCS-CHHHHHHHHHHTEEEEEEEEEEEECTTSHHHHHHHHHGGGSCCCTTCCCCCHHHHHHHHH
T ss_pred cCCCceeEEEEeeeeeecC-CHHHHHHHHHHHcCCCcEEEEEEecCCccHHHHHHHHHHhccCCCcccCCCHHHHHHHHH
Confidence 5688999999999887766 89999999999999999999976432100 0 000011234777888
Q ss_pred HcCceEEE
Q 039518 353 AMCWKLIA 360 (617)
Q Consensus 353 ~~gw~~v~ 360 (617)
++||+.+.
T Consensus 210 ~aGf~~~~ 217 (292)
T 2aot_A 210 NLGLKYEC 217 (292)
T ss_dssp HHTCCEEE
T ss_pred HCCCceEE
Confidence 88887664
No 45
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.48 E-value=4.1e-13 Score=136.48 Aligned_cols=133 Identities=11% Similarity=0.083 Sum_probs=102.2
Q ss_pred cccCCCCeEEEECCCCcHHHHHhccC-CCcEEEeeecCCcHHHHHHHHHh----C--CCcEEEEecCCCCCCCCCCeeEE
Q 039518 224 LRSAGVFQVLDVGCGVASFSAFLLPL-DIQTMSFAPKDGHENQIQFALER----G--IGAMISALSTKQLPYPSSSFEMV 296 (617)
Q Consensus 224 lr~~~g~rVLDIGCGtG~~a~~La~~-gv~~v~v~~iDis~~~lq~A~er----g--~~~~~~~~d~~~Lpf~d~sFDlV 296 (617)
+.+.++.+|||||||+|.++..+++. +. .++++|+++.+++.|+++ + .++.+..+|+.++| ++||+|
T Consensus 60 ~~~~~~~~vLDiGcG~G~~~~~l~~~~~~---~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~---~~fD~v 133 (287)
T 1kpg_A 60 LGLQPGMTLLDVGCGWGATMMRAVEKYDV---NVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGWEQFD---EPVDRI 133 (287)
T ss_dssp TTCCTTCEEEEETCTTSHHHHHHHHHHCC---EEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCGGGCC---CCCSEE
T ss_pred cCCCCcCEEEEECCcccHHHHHHHHHcCC---EEEEEECCHHHHHHHHHHHHhcCCCCCeEEEECChhhCC---CCeeEE
Confidence 34567788999999999999999854 44 788899999999999886 3 25778888887776 789999
Q ss_pred Eecccccccc-cchHHHHHHHHHhccCCeEEEEEeCCCCCCC-------CC-------------------ChhhHHHHHH
Q 039518 297 HCSRCRVDWH-ANDGILLKEVDRVLRPNGYFVYSAPPAYRKD-------KD-------------------YPLIWDKLVN 349 (617)
Q Consensus 297 ~~s~~l~h~~-~d~~~~L~el~RvLrPGG~Liis~p~~~~~~-------~~-------------------~~~~W~~le~ 349 (617)
++..+++|+. +++..+++++.|+|||||.+++.++...... +. ....-+++.+
T Consensus 134 ~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~ 213 (287)
T 1kpg_A 134 VSIGAFEHFGHERYDAFFSLAHRLLPADGVMLLHTITGLHPKEIHERGLPMSFTFARFLKFIVTEIFPGGRLPSIPMVQE 213 (287)
T ss_dssp EEESCGGGTCTTTHHHHHHHHHHHSCTTCEEEEEEEEECCHHHHTTTTCSCHHHHHHHHHHHHHHTSTTCCCCCHHHHHH
T ss_pred EEeCchhhcChHHHHHHHHHHHHhcCCCCEEEEEEecCCCccccccccccccccccchhhhHHheeCCCCCCCCHHHHHH
Confidence 9999888885 4788999999999999999999875321100 00 0001345788
Q ss_pred HHHHcCceEEEEe
Q 039518 350 LTTAMCWKLIARK 362 (617)
Q Consensus 350 La~~~gw~~v~~~ 362 (617)
++++.||+++...
T Consensus 214 ~l~~aGf~~~~~~ 226 (287)
T 1kpg_A 214 CASANGFTVTRVQ 226 (287)
T ss_dssp HHHTTTCEEEEEE
T ss_pred HHHhCCcEEEEEE
Confidence 8889999988743
No 46
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=99.48 E-value=3.8e-14 Score=152.50 Aligned_cols=133 Identities=12% Similarity=0.168 Sum_probs=103.4
Q ss_pred ccCCCCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHhCCCcEE---EEecCCCCCCCCCCeeEEEeccc
Q 039518 225 RSAGVFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALERGIGAMI---SALSTKQLPYPSSSFEMVHCSRC 301 (617)
Q Consensus 225 r~~~g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~erg~~~~~---~~~d~~~Lpf~d~sFDlV~~s~~ 301 (617)
...++.+|||||||+|.++..|++++. .++++|+++.+++.|++++.+... ...+.+.+|+++++||+|+++.+
T Consensus 104 ~~~~~~~VLDiGcG~G~~~~~l~~~g~---~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~fD~I~~~~v 180 (416)
T 4e2x_A 104 LTGPDPFIVEIGCNDGIMLRTIQEAGV---RHLGFEPSSGVAAKAREKGIRVRTDFFEKATADDVRRTEGPANVIYAANT 180 (416)
T ss_dssp TCSSSCEEEEETCTTTTTHHHHHHTTC---EEEEECCCHHHHHHHHTTTCCEECSCCSHHHHHHHHHHHCCEEEEEEESC
T ss_pred CCCCCCEEEEecCCCCHHHHHHHHcCC---cEEEECCCHHHHHHHHHcCCCcceeeechhhHhhcccCCCCEEEEEECCh
Confidence 345677899999999999999999876 678889999999999998765432 12334556777899999999999
Q ss_pred ccccccchHHHHHHHHHhccCCeEEEEEeCCC-------CCC----CCCChhhHHHHHHHHHHcCceEEEE
Q 039518 302 RVDWHANDGILLKEVDRVLRPNGYFVYSAPPA-------YRK----DKDYPLIWDKLVNLTTAMCWKLIAR 361 (617)
Q Consensus 302 l~h~~~d~~~~L~el~RvLrPGG~Liis~p~~-------~~~----~~~~~~~W~~le~La~~~gw~~v~~ 361 (617)
++|+. ++..+|+++.|+|||||++++..|.. .+. ........+.+.+++++.||+++..
T Consensus 181 l~h~~-d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~ll~~aGf~~~~~ 250 (416)
T 4e2x_A 181 LCHIP-YVQSVLEGVDALLAPDGVFVFEDPYLGDIVAKTSFDQIFDEHFFLFSATSVQGMAQRCGFELVDV 250 (416)
T ss_dssp GGGCT-THHHHHHHHHHHEEEEEEEEEEEECHHHHHHHTCGGGCSTTCCEECCHHHHHHHHHHTTEEEEEE
T ss_pred HHhcC-CHHHHHHHHHHHcCCCeEEEEEeCChHHhhhhcchhhhhhhhhhcCCHHHHHHHHHHcCCEEEEE
Confidence 88886 89999999999999999999987641 111 1111111356899999999998864
No 47
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=99.48 E-value=4.2e-13 Score=130.39 Aligned_cols=130 Identities=13% Similarity=0.185 Sum_probs=103.4
Q ss_pred CCCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHhCCCcEEEEecCCC--CCCCCCCeeEEEeccccccc
Q 039518 228 GVFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALERGIGAMISALSTKQ--LPYPSSSFEMVHCSRCRVDW 305 (617)
Q Consensus 228 ~g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~erg~~~~~~~~d~~~--Lpf~d~sFDlV~~s~~l~h~ 305 (617)
++.+|||+|||+|.++..+++.+ ..++++|+++.+++.++++.. .+..+|+.. +++++++||+|+++.+++|+
T Consensus 32 ~~~~vLdiG~G~G~~~~~l~~~~---~~~~~~D~~~~~~~~~~~~~~--~~~~~d~~~~~~~~~~~~fD~v~~~~~l~~~ 106 (230)
T 3cc8_A 32 EWKEVLDIGCSSGALGAAIKENG---TRVSGIEAFPEAAEQAKEKLD--HVVLGDIETMDMPYEEEQFDCVIFGDVLEHL 106 (230)
T ss_dssp TCSEEEEETCTTSHHHHHHHTTT---CEEEEEESSHHHHHHHHTTSS--EEEESCTTTCCCCSCTTCEEEEEEESCGGGS
T ss_pred CCCcEEEeCCCCCHHHHHHHhcC---CeEEEEeCCHHHHHHHHHhCC--cEEEcchhhcCCCCCCCccCEEEECChhhhc
Confidence 55679999999999999999885 378889999999999987753 567778765 67788899999999888877
Q ss_pred ccchHHHHHHHHHhccCCeEEEEEeCCCCC------------CCC---------CChhhHHHHHHHHHHcCceEEEEee
Q 039518 306 HANDGILLKEVDRVLRPNGYFVYSAPPAYR------------KDK---------DYPLIWDKLVNLTTAMCWKLIARKI 363 (617)
Q Consensus 306 ~~d~~~~L~el~RvLrPGG~Liis~p~~~~------------~~~---------~~~~~W~~le~La~~~gw~~v~~~~ 363 (617)
. ++..++.++.++|+|||+++++.|.... ... ......+++.+++++.||+++....
T Consensus 107 ~-~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~ 184 (230)
T 3cc8_A 107 F-DPWAVIEKVKPYIKQNGVILASIPNVSHISVLAPLLAGNWTYTEYGLLDKTHIRFFTFNEMLRMFLKAGYSISKVDR 184 (230)
T ss_dssp S-CHHHHHHHTGGGEEEEEEEEEEEECTTSHHHHHHHHTTCCCCBSSSTTBTTCCCCCCHHHHHHHHHHTTEEEEEEEE
T ss_pred C-CHHHHHHHHHHHcCCCCEEEEEeCCcchHHHHHHHhcCCceeccCCCCCcceEEEecHHHHHHHHHHcCCeEEEEEe
Confidence 6 7899999999999999999999865211 100 0111245689999999999887544
No 48
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.47 E-value=1.9e-13 Score=134.50 Aligned_cols=115 Identities=15% Similarity=0.226 Sum_probs=93.1
Q ss_pred HHHHHHHhhhhhccCCcccCCCCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHh----CCCcEEEEecC
Q 039518 208 EYIQRLGNMMTNETGNLRSAGVFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALER----GIGAMISALST 283 (617)
Q Consensus 208 ~Y~~~L~~~L~~~~~~lr~~~g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~er----g~~~~~~~~d~ 283 (617)
.+.+.+.+.+... ..++.+|||+|||+|.++..+++.+. .++++|+++.+++.|+++ +.++.+..+|+
T Consensus 22 ~~~~~~~~~l~~~-----~~~~~~vLdiG~G~G~~~~~l~~~~~---~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~d~ 93 (246)
T 1y8c_A 22 KWSDFIIEKCVEN-----NLVFDDYLDLACGTGNLTENLCPKFK---NTWAVDLSQEMLSEAENKFRSQGLKPRLACQDI 93 (246)
T ss_dssp HHHHHHHHHHHTT-----TCCTTEEEEETCTTSTTHHHHGGGSS---EEEEECSCHHHHHHHHHHHHHTTCCCEEECCCG
T ss_pred HHHHHHHHHHHHh-----CCCCCeEEEeCCCCCHHHHHHHHCCC---cEEEEECCHHHHHHHHHHHhhcCCCeEEEeccc
Confidence 4445555555322 12456799999999999999998865 678889999999998876 34688888999
Q ss_pred CCCCCCCCCeeEEEecc-cccccc--cchHHHHHHHHHhccCCeEEEEEeC
Q 039518 284 KQLPYPSSSFEMVHCSR-CRVDWH--ANDGILLKEVDRVLRPNGYFVYSAP 331 (617)
Q Consensus 284 ~~Lpf~d~sFDlV~~s~-~l~h~~--~d~~~~L~el~RvLrPGG~Liis~p 331 (617)
..++++ ++||+|+++. +++|+. +++..+|+++.++|+|||.++++.+
T Consensus 94 ~~~~~~-~~fD~v~~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 143 (246)
T 1y8c_A 94 SNLNIN-RKFDLITCCLDSTNYIIDSDDLKKYFKAVSNHLKEGGVFIFDIN 143 (246)
T ss_dssp GGCCCS-CCEEEEEECTTGGGGCCSHHHHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred ccCCcc-CCceEEEEcCccccccCCHHHHHHHHHHHHHhcCCCcEEEEEec
Confidence 888877 8899999998 888874 4678899999999999999999765
No 49
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=99.47 E-value=1.4e-13 Score=133.31 Aligned_cols=99 Identities=23% Similarity=0.231 Sum_probs=87.6
Q ss_pred CCCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHhCCCcEEEEecCCCCCCCCCCeeEEEeccccccccc
Q 039518 228 GVFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALERGIGAMISALSTKQLPYPSSSFEMVHCSRCRVDWHA 307 (617)
Q Consensus 228 ~g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~erg~~~~~~~~d~~~Lpf~d~sFDlV~~s~~l~h~~~ 307 (617)
++.+|||+|||+|.++..+ +.. .++++|+++.+++.|+++..++.+..+|+..+|+++++||+|+++.+++|+.
T Consensus 36 ~~~~vLdiG~G~G~~~~~l---~~~--~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~- 109 (211)
T 2gs9_A 36 PGESLLEVGAGTGYWLRRL---PYP--QKVGVEPSEAMLAVGRRRAPEATWVRAWGEALPFPGESFDVVLLFTTLEFVE- 109 (211)
T ss_dssp CCSEEEEETCTTCHHHHHC---CCS--EEEEECCCHHHHHHHHHHCTTSEEECCCTTSCCSCSSCEEEEEEESCTTTCS-
T ss_pred CCCeEEEECCCCCHhHHhC---CCC--eEEEEeCCHHHHHHHHHhCCCcEEEEcccccCCCCCCcEEEEEEcChhhhcC-
Confidence 5678999999999999888 331 6788899999999999987678888999999999999999999998887765
Q ss_pred chHHHHHHHHHhccCCeEEEEEeCC
Q 039518 308 NDGILLKEVDRVLRPNGYFVYSAPP 332 (617)
Q Consensus 308 d~~~~L~el~RvLrPGG~Liis~p~ 332 (617)
++..+++++.++|||||.+++++++
T Consensus 110 ~~~~~l~~~~~~L~pgG~l~i~~~~ 134 (211)
T 2gs9_A 110 DVERVLLEARRVLRPGGALVVGVLE 134 (211)
T ss_dssp CHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred CHHHHHHHHHHHcCCCCEEEEEecC
Confidence 8999999999999999999999864
No 50
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.47 E-value=2.4e-13 Score=132.60 Aligned_cols=101 Identities=14% Similarity=0.115 Sum_probs=84.5
Q ss_pred CCCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHhCC----------CcEEEEecCCCCCCCCCCeeEEE
Q 039518 228 GVFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALERGI----------GAMISALSTKQLPYPSSSFEMVH 297 (617)
Q Consensus 228 ~g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~erg~----------~~~~~~~d~~~Lpf~d~sFDlV~ 297 (617)
++.+|||||||+|.++..|++++.. ..++++|+++.+++.|+++.. ++.+..+|+..+++++++||+|+
T Consensus 29 ~~~~vLDiGcG~G~~~~~l~~~~~~-~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~ 107 (217)
T 3jwh_A 29 NARRVIDLGCGQGNLLKILLKDSFF-EQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQGALTYQDKRFHGYDAAT 107 (217)
T ss_dssp TCCEEEEETCTTCHHHHHHHHCTTC-SEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEECCTTSCCGGGCSCSEEE
T ss_pred CCCEEEEeCCCCCHHHHHHHhhCCC-CEEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEeCCcccccccCCCcCEEe
Confidence 4457999999999999999987642 278889999999999988721 57888888887777778999999
Q ss_pred ecccccccccch--HHHHHHHHHhccCCeEEEEEe
Q 039518 298 CSRCRVDWHAND--GILLKEVDRVLRPNGYFVYSA 330 (617)
Q Consensus 298 ~s~~l~h~~~d~--~~~L~el~RvLrPGG~Liis~ 330 (617)
|+.+++|+. ++ ..+++++.++|||||.++++.
T Consensus 108 ~~~~l~~~~-~~~~~~~l~~~~~~LkpgG~li~~~ 141 (217)
T 3jwh_A 108 VIEVIEHLD-LSRLGAFERVLFEFAQPKIVIVTTP 141 (217)
T ss_dssp EESCGGGCC-HHHHHHHHHHHHTTTCCSEEEEEEE
T ss_pred eHHHHHcCC-HHHHHHHHHHHHHHcCCCEEEEEcc
Confidence 999888875 44 789999999999999777654
No 51
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.46 E-value=1.5e-13 Score=138.35 Aligned_cols=101 Identities=26% Similarity=0.450 Sum_probs=89.4
Q ss_pred CCCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHhCCCcEEEEecCCCCCCCCCCeeEEEeccccccccc
Q 039518 228 GVFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALERGIGAMISALSTKQLPYPSSSFEMVHCSRCRVDWHA 307 (617)
Q Consensus 228 ~g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~erg~~~~~~~~d~~~Lpf~d~sFDlV~~s~~l~h~~~ 307 (617)
++.+|||||||+|.++..|++.+. .++++|+++.+++.|+++.... +..+|+..+++++++||+|++..+++|+..
T Consensus 54 ~~~~vLDiGcG~G~~~~~l~~~~~---~v~gvD~s~~~l~~a~~~~~~~-~~~~d~~~~~~~~~~fD~v~~~~~~~~~~~ 129 (260)
T 2avn_A 54 NPCRVLDLGGGTGKWSLFLQERGF---EVVLVDPSKEMLEVAREKGVKN-VVEAKAEDLPFPSGAFEAVLALGDVLSYVE 129 (260)
T ss_dssp SCCEEEEETCTTCHHHHHHHTTTC---EEEEEESCHHHHHHHHHHTCSC-EEECCTTSCCSCTTCEEEEEECSSHHHHCS
T ss_pred CCCeEEEeCCCcCHHHHHHHHcCC---eEEEEeCCHHHHHHHHhhcCCC-EEECcHHHCCCCCCCEEEEEEcchhhhccc
Confidence 456799999999999999998864 6788899999999999886543 778899999998999999999888888876
Q ss_pred chHHHHHHHHHhccCCeEEEEEeCC
Q 039518 308 NDGILLKEVDRVLRPNGYFVYSAPP 332 (617)
Q Consensus 308 d~~~~L~el~RvLrPGG~Liis~p~ 332 (617)
++..+|+++.++|||||.++++.++
T Consensus 130 ~~~~~l~~~~~~LkpgG~l~~~~~~ 154 (260)
T 2avn_A 130 NKDKAFSEIRRVLVPDGLLIATVDN 154 (260)
T ss_dssp CHHHHHHHHHHHEEEEEEEEEEEEB
T ss_pred cHHHHHHHHHHHcCCCeEEEEEeCC
Confidence 7999999999999999999998863
No 52
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.46 E-value=2.1e-13 Score=135.99 Aligned_cols=99 Identities=16% Similarity=0.205 Sum_probs=88.1
Q ss_pred CCCCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHh----CCCcEEEEecCCCCCCCCCCeeEEEecccc
Q 039518 227 AGVFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALER----GIGAMISALSTKQLPYPSSSFEMVHCSRCR 302 (617)
Q Consensus 227 ~~g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~er----g~~~~~~~~d~~~Lpf~d~sFDlV~~s~~l 302 (617)
.++.+|||+|||+|.++..+++++. .++++|+++.+++.|+++ ..++.+..+|++.+|+++++||+|+++.++
T Consensus 38 ~~~~~vLDiG~G~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l 114 (263)
T 2yqz_A 38 GEEPVFLELGVGTGRIALPLIARGY---RYIALDADAAMLEVFRQKIAGVDRKVQVVQADARAIPLPDESVHGVIVVHLW 114 (263)
T ss_dssp SSCCEEEEETCTTSTTHHHHHTTTC---EEEEEESCHHHHHHHHHHTTTSCTTEEEEESCTTSCCSCTTCEEEEEEESCG
T ss_pred CCCCEEEEeCCcCCHHHHHHHHCCC---EEEEEECCHHHHHHHHHHhhccCCceEEEEcccccCCCCCCCeeEEEECCch
Confidence 4667899999999999999998864 678889999999999987 346888999999999999999999999877
Q ss_pred cccccchHHHHHHHHHhccCCeEEEEE
Q 039518 303 VDWHANDGILLKEVDRVLRPNGYFVYS 329 (617)
Q Consensus 303 ~h~~~d~~~~L~el~RvLrPGG~Liis 329 (617)
+++. ++..++.++.++|||||++++.
T Consensus 115 ~~~~-~~~~~l~~~~~~L~pgG~l~~~ 140 (263)
T 2yqz_A 115 HLVP-DWPKVLAEAIRVLKPGGALLEG 140 (263)
T ss_dssp GGCT-THHHHHHHHHHHEEEEEEEEEE
T ss_pred hhcC-CHHHHHHHHHHHCCCCcEEEEE
Confidence 7665 8899999999999999999987
No 53
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=99.45 E-value=5.9e-13 Score=130.79 Aligned_cols=100 Identities=17% Similarity=0.122 Sum_probs=85.7
Q ss_pred CCCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHhCCCcEEEEecCCCCCCCCCCeeEEEecc-cccccc
Q 039518 228 GVFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALERGIGAMISALSTKQLPYPSSSFEMVHCSR-CRVDWH 306 (617)
Q Consensus 228 ~g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~erg~~~~~~~~d~~~Lpf~d~sFDlV~~s~-~l~h~~ 306 (617)
++.+|||+|||+|.++..+++++. .++++|+++.+++.|+++..++.+..+|+..+++ +++||+|+|+. +++|+.
T Consensus 40 ~~~~vLdiG~G~G~~~~~l~~~~~---~v~~~D~s~~~~~~a~~~~~~~~~~~~d~~~~~~-~~~~D~v~~~~~~~~~~~ 115 (239)
T 3bxo_A 40 EASSLLDVACGTGTHLEHFTKEFG---DTAGLELSEDMLTHARKRLPDATLHQGDMRDFRL-GRKFSAVVSMFSSVGYLK 115 (239)
T ss_dssp TCCEEEEETCTTSHHHHHHHHHHS---EEEEEESCHHHHHHHHHHCTTCEEEECCTTTCCC-SSCEEEEEECTTGGGGCC
T ss_pred CCCeEEEecccCCHHHHHHHHhCC---cEEEEeCCHHHHHHHHHhCCCCEEEECCHHHccc-CCCCcEEEEcCchHhhcC
Confidence 456799999999999999998765 6788899999999999987778999999988887 77899999755 566653
Q ss_pred --cchHHHHHHHHHhccCCeEEEEEeC
Q 039518 307 --ANDGILLKEVDRVLRPNGYFVYSAP 331 (617)
Q Consensus 307 --~d~~~~L~el~RvLrPGG~Liis~p 331 (617)
++...+|+++.++|+|||.++++.+
T Consensus 116 ~~~~~~~~l~~~~~~L~pgG~l~~~~~ 142 (239)
T 3bxo_A 116 TTEELGAAVASFAEHLEPGGVVVVEPW 142 (239)
T ss_dssp SHHHHHHHHHHHHHTEEEEEEEEECCC
T ss_pred CHHHHHHHHHHHHHhcCCCeEEEEEec
Confidence 4567899999999999999999864
No 54
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.45 E-value=3.7e-13 Score=138.12 Aligned_cols=98 Identities=16% Similarity=0.157 Sum_probs=83.6
Q ss_pred eEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHhC--------CCcEEEEecCCCCCCCCCCeeEEEecccc
Q 039518 231 QVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALERG--------IGAMISALSTKQLPYPSSSFEMVHCSRCR 302 (617)
Q Consensus 231 rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~erg--------~~~~~~~~d~~~Lpf~d~sFDlV~~s~~l 302 (617)
+|||||||+|.++..|++++. .++++|+++.+++.|+++. .++.+..+|+..+++ +++||+|+|+..+
T Consensus 85 ~vLDlGcG~G~~~~~l~~~~~---~v~gvD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~-~~~fD~v~~~~~~ 160 (299)
T 3g2m_A 85 PVLELAAGMGRLTFPFLDLGW---EVTALELSTSVLAAFRKRLAEAPADVRDRCTLVQGDMSAFAL-DKRFGTVVISSGS 160 (299)
T ss_dssp CEEEETCTTTTTHHHHHTTTC---CEEEEESCHHHHHHHHHHHHTSCHHHHTTEEEEECBTTBCCC-SCCEEEEEECHHH
T ss_pred cEEEEeccCCHHHHHHHHcCC---eEEEEECCHHHHHHHHHHHhhcccccccceEEEeCchhcCCc-CCCcCEEEECCcc
Confidence 599999999999999999865 5778899999999998762 458899999999987 6889999987666
Q ss_pred ccccc--chHHHHHHHHHhccCCeEEEEEeCC
Q 039518 303 VDWHA--NDGILLKEVDRVLRPNGYFVYSAPP 332 (617)
Q Consensus 303 ~h~~~--d~~~~L~el~RvLrPGG~Liis~p~ 332 (617)
+++.. +...+|+++.++|||||+|++.++.
T Consensus 161 ~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 192 (299)
T 3g2m_A 161 INELDEADRRGLYASVREHLEPGGKFLLSLAM 192 (299)
T ss_dssp HTTSCHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred cccCCHHHHHHHHHHHHHHcCCCcEEEEEeec
Confidence 66653 3578999999999999999998754
No 55
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=99.44 E-value=8.8e-14 Score=140.83 Aligned_cols=134 Identities=10% Similarity=-0.015 Sum_probs=97.4
Q ss_pred CCCCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHhC------C--------------------------
Q 039518 227 AGVFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALERG------I-------------------------- 274 (617)
Q Consensus 227 ~~g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~erg------~-------------------------- 274 (617)
.++.+|||||||+|.++..++..+.. .|+++|+|+.+++.|+++. .
T Consensus 54 ~~g~~vLDiGCG~G~~~~~~~~~~~~--~v~g~D~s~~~l~~a~~~~~~~~~~~d~s~~~~~~~~~~~~~~~~~~~~~~~ 131 (263)
T 2a14_A 54 LQGDTLIDIGSGPTIYQVLAACDSFQ--DITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEGNSGRWEEKEEKL 131 (263)
T ss_dssp CCEEEEEESSCTTCCGGGTTGGGTEE--EEEEEESCHHHHHHHHHHHHTCTTCCCCHHHHHHHHHHTTCGGGHHHHHHHH
T ss_pred CCCceEEEeCCCccHHHHHHHHhhhc--ceeeccccHHHHHHHHHHHhcCCCcccchHHHHHHHhcCCCCcchhhHHHHH
Confidence 46778999999999888777776643 6889999999999887641 0
Q ss_pred --Cc-EEEEecCCC-CCC---CCCCeeEEEecccccccc---cchHHHHHHHHHhccCCeEEEEEeCCCCC--C-C----
Q 039518 275 --GA-MISALSTKQ-LPY---PSSSFEMVHCSRCRVDWH---ANDGILLKEVDRVLRPNGYFVYSAPPAYR--K-D---- 337 (617)
Q Consensus 275 --~~-~~~~~d~~~-Lpf---~d~sFDlV~~s~~l~h~~---~d~~~~L~el~RvLrPGG~Liis~p~~~~--~-~---- 337 (617)
.+ .+..+|+.. .|+ ..++||+|+++.+++|.. ++...+++++.|+|||||+|++++..... . .
T Consensus 132 ~~~i~~~~~~D~~~~~~~~~~~~~~fD~V~~~~~l~~i~~~~~~~~~~l~~i~r~LKPGG~li~~~~~~~~~~~~g~~~~ 211 (263)
T 2a14_A 132 RAAVKRVLKCDVHLGNPLAPAVLPLADCVLTLLAMECACCSLDAYRAALCNLASLLKPGGHLVTTVTLRLPSYMVGKREF 211 (263)
T ss_dssp HHHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEESSCCEEEETTEEE
T ss_pred HhhhheEEeccccCCCCCCccccCCCCEeeehHHHHHhcCCHHHHHHHHHHHHHHcCCCcEEEEEEeecCccceeCCeEe
Confidence 01 266778766 344 357899999999888753 35578999999999999999999742110 0 0
Q ss_pred CCChhhHHHHHHHHHHcCceEEEEe
Q 039518 338 KDYPLIWDKLVNLTTAMCWKLIARK 362 (617)
Q Consensus 338 ~~~~~~W~~le~La~~~gw~~v~~~ 362 (617)
......-+++.+++++.||+++...
T Consensus 212 ~~~~~~~~~l~~~l~~aGF~i~~~~ 236 (263)
T 2a14_A 212 SCVALEKGEVEQAVLDAGFDIEQLL 236 (263)
T ss_dssp ECCCCCHHHHHHHHHHTTEEEEEEE
T ss_pred eccccCHHHHHHHHHHCCCEEEEEe
Confidence 0001124468899999999988643
No 56
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.44 E-value=6e-13 Score=136.78 Aligned_cols=102 Identities=13% Similarity=0.138 Sum_probs=85.6
Q ss_pred cccCCCCeEEEECCCCcHHHHHhccC-CCcEEEeeecCCcHHHHHHHHHh----CC--CcEEEEecCCCCCCCCCCeeEE
Q 039518 224 LRSAGVFQVLDVGCGVASFSAFLLPL-DIQTMSFAPKDGHENQIQFALER----GI--GAMISALSTKQLPYPSSSFEMV 296 (617)
Q Consensus 224 lr~~~g~rVLDIGCGtG~~a~~La~~-gv~~v~v~~iDis~~~lq~A~er----g~--~~~~~~~d~~~Lpf~d~sFDlV 296 (617)
+.+.++.+|||||||+|.++..++++ +. .++++|+++.+++.|+++ +. ++.+..+|+.++ +++||+|
T Consensus 68 ~~~~~~~~vLDiGcG~G~~~~~la~~~~~---~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~---~~~fD~v 141 (302)
T 3hem_A 68 LNLEPGMTLLDIGCGWGSTMRHAVAEYDV---NVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGWEEF---DEPVDRI 141 (302)
T ss_dssp TCCCTTCEEEEETCTTSHHHHHHHHHHCC---EEEEEECCHHHHHHHHHHHHHSCCSSCEEEEECCGGGC---CCCCSEE
T ss_pred cCCCCcCEEEEeeccCcHHHHHHHHhCCC---EEEEEECCHHHHHHHHHHHHhcCCCCceEEEECCHHHc---CCCccEE
Confidence 34567788999999999999999987 53 688899999999999876 43 377888888776 6899999
Q ss_pred Eeccccccccc--------chHHHHHHHHHhccCCeEEEEEeC
Q 039518 297 HCSRCRVDWHA--------NDGILLKEVDRVLRPNGYFVYSAP 331 (617)
Q Consensus 297 ~~s~~l~h~~~--------d~~~~L~el~RvLrPGG~Liis~p 331 (617)
+++.+++|+.+ +...+++++.++|||||.+++.+.
T Consensus 142 ~~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 184 (302)
T 3hem_A 142 VSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHTI 184 (302)
T ss_dssp EEESCGGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEEEE
T ss_pred EEcchHHhcCccccccchhHHHHHHHHHHHhcCCCcEEEEEEE
Confidence 99998888741 237899999999999999999875
No 57
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.44 E-value=3.3e-13 Score=131.19 Aligned_cols=101 Identities=18% Similarity=0.262 Sum_probs=86.9
Q ss_pred CCCCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHhCC---CcEEEEecCCCCCCCCCCeeEEEeccccc
Q 039518 227 AGVFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALERGI---GAMISALSTKQLPYPSSSFEMVHCSRCRV 303 (617)
Q Consensus 227 ~~g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~erg~---~~~~~~~d~~~Lpf~d~sFDlV~~s~~l~ 303 (617)
.++.+|||+|||+|.++..|++.+ ..++++|+++.+++.|+++.. ++.+..+|+..++ ++++||+|+|+.+++
T Consensus 50 ~~~~~vLDiGcG~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~-~~~~fD~v~~~~~l~ 125 (216)
T 3ofk_A 50 GAVSNGLEIGCAAGAFTEKLAPHC---KRLTVIDVMPRAIGRACQRTKRWSHISWAATDILQFS-TAELFDLIVVAEVLY 125 (216)
T ss_dssp SSEEEEEEECCTTSHHHHHHGGGE---EEEEEEESCHHHHHHHHHHTTTCSSEEEEECCTTTCC-CSCCEEEEEEESCGG
T ss_pred CCCCcEEEEcCCCCHHHHHHHHcC---CEEEEEECCHHHHHHHHHhcccCCCeEEEEcchhhCC-CCCCccEEEEccHHH
Confidence 355679999999999999999875 378899999999999998742 5788999998888 688999999999888
Q ss_pred ccccch---HHHHHHHHHhccCCeEEEEEeCC
Q 039518 304 DWHAND---GILLKEVDRVLRPNGYFVYSAPP 332 (617)
Q Consensus 304 h~~~d~---~~~L~el~RvLrPGG~Liis~p~ 332 (617)
|+. ++ ..++.++.++|||||+++++++.
T Consensus 126 ~~~-~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 156 (216)
T 3ofk_A 126 YLE-DMTQMRTAIDNMVKMLAPGGHLVFGSAR 156 (216)
T ss_dssp GSS-SHHHHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred hCC-CHHHHHHHHHHHHHHcCCCCEEEEEecC
Confidence 776 44 56799999999999999998753
No 58
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.44 E-value=1.2e-12 Score=124.77 Aligned_cols=131 Identities=14% Similarity=0.201 Sum_probs=98.7
Q ss_pred CCCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHh----CC-CcEEEEecCCCCCCCCCCeeEEEecccc
Q 039518 228 GVFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALER----GI-GAMISALSTKQLPYPSSSFEMVHCSRCR 302 (617)
Q Consensus 228 ~g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~er----g~-~~~~~~~d~~~Lpf~d~sFDlV~~s~~l 302 (617)
++.+|||+|||+|.++..+++.+. .++++|+++.+++.|+++ +. ++.+..+|+..+++ +++||+|+++.++
T Consensus 32 ~~~~vLdiG~G~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~-~~~~D~v~~~~~l 107 (199)
T 2xvm_A 32 KPGKTLDLGCGNGRNSLYLAANGY---DVDAWDKNAMSIANVERIKSIENLDNLHTRVVDLNNLTF-DRQYDFILSTVVL 107 (199)
T ss_dssp CSCEEEEETCTTSHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHHHHTCTTEEEEECCGGGCCC-CCCEEEEEEESCG
T ss_pred CCCeEEEEcCCCCHHHHHHHHCCC---eEEEEECCHHHHHHHHHHHHhCCCCCcEEEEcchhhCCC-CCCceEEEEcchh
Confidence 455799999999999999998865 678889999999988764 44 57888899988888 8899999999888
Q ss_pred cccc-cchHHHHHHHHHhccCCeEEEEEeCCCCCC--CC---CChhhHHHHHHHHHHcCceEEEEeee
Q 039518 303 VDWH-ANDGILLKEVDRVLRPNGYFVYSAPPAYRK--DK---DYPLIWDKLVNLTTAMCWKLIARKIQ 364 (617)
Q Consensus 303 ~h~~-~d~~~~L~el~RvLrPGG~Liis~p~~~~~--~~---~~~~~W~~le~La~~~gw~~v~~~~~ 364 (617)
+|+. ++...++.++.++|+|||++++..+..... .+ .....-+++.++++. |+++.....
T Consensus 108 ~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--f~~~~~~~~ 173 (199)
T 2xvm_A 108 MFLEAKTIPGLIANMQRCTKPGGYNLIVAAMDTADYPCTVGFPFAFKEGELRRYYEG--WERVKYNED 173 (199)
T ss_dssp GGSCGGGHHHHHHHHHHTEEEEEEEEEEEEBCCSSSCCCSCCSCCBCTTHHHHHTTT--SEEEEEECC
T ss_pred hhCCHHHHHHHHHHHHHhcCCCeEEEEEEeeccCCcCCCCCCCCccCHHHHHHHhcC--CeEEEeccc
Confidence 7765 367889999999999999988865321111 00 000012346666665 888876544
No 59
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=99.43 E-value=2.3e-13 Score=138.54 Aligned_cols=114 Identities=24% Similarity=0.388 Sum_probs=93.4
Q ss_pred hHHHHHHHhhhhhccCCcccCCCCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHhC---------CCcE
Q 039518 207 PEYIQRLGNMMTNETGNLRSAGVFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALERG---------IGAM 277 (617)
Q Consensus 207 ~~Y~~~L~~~L~~~~~~lr~~~g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~erg---------~~~~ 277 (617)
..+.+.+.+.++.. ++.+|||||||+|.++..|++.+. .++++|+++.+++.|+++. .++.
T Consensus 43 ~~~~~~l~~~l~~~-------~~~~vLDiGcG~G~~~~~l~~~~~---~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~ 112 (293)
T 3thr_A 43 AEYKAWLLGLLRQH-------GCHRVLDVACGTGVDSIMLVEEGF---SVTSVDASDKMLKYALKERWNRRKEPAFDKWV 112 (293)
T ss_dssp HHHHHHHHHHHHHT-------TCCEEEETTCTTSHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHHHTTTSHHHHTCE
T ss_pred HHHHHHHHHHhccc-------CCCEEEEecCCCCHHHHHHHHCCC---eEEEEECCHHHHHHHHHhhhhcccccccceee
Confidence 45556666665432 345799999999999999999876 6788899999999998652 2466
Q ss_pred EEEecCCCCC---CCCCCeeEEEec-ccccccccc-------hHHHHHHHHHhccCCeEEEEEeC
Q 039518 278 ISALSTKQLP---YPSSSFEMVHCS-RCRVDWHAN-------DGILLKEVDRVLRPNGYFVYSAP 331 (617)
Q Consensus 278 ~~~~d~~~Lp---f~d~sFDlV~~s-~~l~h~~~d-------~~~~L~el~RvLrPGG~Liis~p 331 (617)
+..++...++ +++++||+|+|. .+++|+. + ...+++++.++|||||+++++.+
T Consensus 113 ~~~~d~~~~~~~~~~~~~fD~V~~~g~~l~~~~-~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 176 (293)
T 3thr_A 113 IEEANWLTLDKDVPAGDGFDAVICLGNSFAHLP-DSKGDQSEHRLALKNIASMVRPGGLLVIDHR 176 (293)
T ss_dssp EEECCGGGHHHHSCCTTCEEEEEECTTCGGGSC-CSSSSSHHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred EeecChhhCccccccCCCeEEEEEcChHHhhcC-ccccCHHHHHHHHHHHHHHcCCCeEEEEEeC
Confidence 7788888877 888999999998 7787776 5 78899999999999999999876
No 60
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=99.43 E-value=6.9e-13 Score=127.55 Aligned_cols=126 Identities=13% Similarity=0.121 Sum_probs=97.5
Q ss_pred eEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHh----CCCcEEEEecCCCCCCCCCCeeEEEecccccccc
Q 039518 231 QVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALER----GIGAMISALSTKQLPYPSSSFEMVHCSRCRVDWH 306 (617)
Q Consensus 231 rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~er----g~~~~~~~~d~~~Lpf~d~sFDlV~~s~~l~h~~ 306 (617)
+|||||||+|.++..+++.+. .++++|+++.+++.|+++ +.++.+..+|+..+++++++||+|+++. .|+.
T Consensus 32 ~vLdiGcG~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~--~~~~ 106 (202)
T 2kw5_A 32 KILCLAEGEGRNACFLASLGY---EVTAVDQSSVGLAKAKQLAQEKGVKITTVQSNLADFDIVADAWEGIVSIF--CHLP 106 (202)
T ss_dssp EEEECCCSCTHHHHHHHTTTC---EEEEECSSHHHHHHHHHHHHHHTCCEEEECCBTTTBSCCTTTCSEEEEEC--CCCC
T ss_pred CEEEECCCCCHhHHHHHhCCC---eEEEEECCHHHHHHHHHHHHhcCCceEEEEcChhhcCCCcCCccEEEEEh--hcCC
Confidence 699999999999999998865 678889999999998876 5578888899988888889999999864 3443
Q ss_pred -cchHHHHHHHHHhccCCeEEEEEeCCCCCC-----CC---CChhhHHHHHHHHHHcCceEEEEee
Q 039518 307 -ANDGILLKEVDRVLRPNGYFVYSAPPAYRK-----DK---DYPLIWDKLVNLTTAMCWKLIARKI 363 (617)
Q Consensus 307 -~d~~~~L~el~RvLrPGG~Liis~p~~~~~-----~~---~~~~~W~~le~La~~~gw~~v~~~~ 363 (617)
++...++.++.++|+|||+++++++..... .+ .....-+++.++++ ||+++....
T Consensus 107 ~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~--Gf~v~~~~~ 170 (202)
T 2kw5_A 107 SSLRQQLYPKVYQGLKPGGVFILEGFAPEQLQYNTGGPKDLDLLPKLETLQSELP--SLNWLIANN 170 (202)
T ss_dssp HHHHHHHHHHHHTTCCSSEEEEEEEECTTTGGGTSCCSSSGGGCCCHHHHHHHCS--SSCEEEEEE
T ss_pred HHHHHHHHHHHHHhcCCCcEEEEEEeccccccCCCCCCCcceeecCHHHHHHHhc--CceEEEEEE
Confidence 467889999999999999999997643211 01 01111344777776 999887543
No 61
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.43 E-value=7.5e-13 Score=128.99 Aligned_cols=100 Identities=27% Similarity=0.367 Sum_probs=86.2
Q ss_pred CCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHh----CCCcEEEEecCCCCCCCCCCeeEEEecccccc
Q 039518 229 VFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALER----GIGAMISALSTKQLPYPSSSFEMVHCSRCRVD 304 (617)
Q Consensus 229 g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~er----g~~~~~~~~d~~~Lpf~d~sFDlV~~s~~l~h 304 (617)
+.+|||+|||+|.++..+++.+. .++++|+++.+++.|+++ +.++.+..+|+..+++++++||+|+++.++++
T Consensus 39 ~~~vLDlG~G~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~~~~ 115 (227)
T 1ve3_A 39 RGKVLDLACGVGGFSFLLEDYGF---EVVGVDISEDMIRKAREYAKSRESNVEFIVGDARKLSFEDKTFDYVIFIDSIVH 115 (227)
T ss_dssp CCEEEEETCTTSHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHHHTTCCCEEEECCTTSCCSCTTCEEEEEEESCGGG
T ss_pred CCeEEEEeccCCHHHHHHHHcCC---EEEEEECCHHHHHHHHHHHHhcCCCceEEECchhcCCCCCCcEEEEEEcCchHh
Confidence 56799999999999999998876 678889999999998876 46688999999888888889999999877333
Q ss_pred cc-cchHHHHHHHHHhccCCeEEEEEeC
Q 039518 305 WH-ANDGILLKEVDRVLRPNGYFVYSAP 331 (617)
Q Consensus 305 ~~-~d~~~~L~el~RvLrPGG~Liis~p 331 (617)
+. .++..++.++.++|+|||.+++..+
T Consensus 116 ~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 143 (227)
T 1ve3_A 116 FEPLELNQVFKEVRRVLKPSGKFIMYFT 143 (227)
T ss_dssp CCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCHHHHHHHHHHHHHHcCCCcEEEEEec
Confidence 33 4678899999999999999999875
No 62
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.42 E-value=1.3e-12 Score=135.03 Aligned_cols=103 Identities=12% Similarity=0.119 Sum_probs=87.6
Q ss_pred cccCCCCeEEEECCCCcHHHHHhccC-CCcEEEeeecCCcHHHHHHHHHh----CC--CcEEEEecCCCCCCCCCCeeEE
Q 039518 224 LRSAGVFQVLDVGCGVASFSAFLLPL-DIQTMSFAPKDGHENQIQFALER----GI--GAMISALSTKQLPYPSSSFEMV 296 (617)
Q Consensus 224 lr~~~g~rVLDIGCGtG~~a~~La~~-gv~~v~v~~iDis~~~lq~A~er----g~--~~~~~~~d~~~Lpf~d~sFDlV 296 (617)
+.+.++.+|||||||+|.++..+++. +. .++++|+++.+++.|+++ +. .+.+..+|+.++| ++||+|
T Consensus 86 ~~~~~~~~vLDiGcG~G~~~~~la~~~~~---~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~---~~fD~v 159 (318)
T 2fk8_A 86 LDLKPGMTLLDIGCGWGTTMRRAVERFDV---NVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGWEDFA---EPVDRI 159 (318)
T ss_dssp SCCCTTCEEEEESCTTSHHHHHHHHHHCC---EEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCGGGCC---CCCSEE
T ss_pred cCCCCcCEEEEEcccchHHHHHHHHHCCC---EEEEEECCHHHHHHHHHHHHhcCCCCceEEEECChHHCC---CCcCEE
Confidence 34567788999999999999999887 54 678889999999999886 33 3778888887775 789999
Q ss_pred Eecccccccc-cchHHHHHHHHHhccCCeEEEEEeCC
Q 039518 297 HCSRCRVDWH-ANDGILLKEVDRVLRPNGYFVYSAPP 332 (617)
Q Consensus 297 ~~s~~l~h~~-~d~~~~L~el~RvLrPGG~Liis~p~ 332 (617)
++..+++|+. +++..++.++.++|||||.+++.++.
T Consensus 160 ~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 196 (318)
T 2fk8_A 160 VSIEAFEHFGHENYDDFFKRCFNIMPADGRMTVQSSV 196 (318)
T ss_dssp EEESCGGGTCGGGHHHHHHHHHHHSCTTCEEEEEEEE
T ss_pred EEeChHHhcCHHHHHHHHHHHHHhcCCCcEEEEEEec
Confidence 9999888875 47899999999999999999998764
No 63
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.42 E-value=7.7e-13 Score=134.27 Aligned_cols=104 Identities=22% Similarity=0.226 Sum_probs=86.8
Q ss_pred CCCCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHh----CC--CcEEEEecCCCCCC-CCCCeeEEEec
Q 039518 227 AGVFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALER----GI--GAMISALSTKQLPY-PSSSFEMVHCS 299 (617)
Q Consensus 227 ~~g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~er----g~--~~~~~~~d~~~Lpf-~d~sFDlV~~s 299 (617)
.++.+|||||||+|.++..+++.+.. .++++|+++.+++.|+++ +. ++.+..+|+..+++ ++++||+|++.
T Consensus 63 ~~~~~vLDiGcG~G~~~~~l~~~~~~--~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~ 140 (298)
T 1ri5_A 63 KRGDSVLDLGCGKGGDLLKYERAGIG--EYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYGRHMDLGKEFDVISSQ 140 (298)
T ss_dssp CTTCEEEEETCTTTTTHHHHHHHTCS--EEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTTSCCCCSSCEEEEEEE
T ss_pred CCCCeEEEECCCCCHHHHHHHHCCCC--EEEEEECCHHHHHHHHHHHHhcCCCccEEEEECCccccccCCCCCcCEEEEC
Confidence 45678999999999999998877532 678899999999999876 22 46888889988888 68899999999
Q ss_pred cccccc---ccchHHHHHHHHHhccCCeEEEEEeCC
Q 039518 300 RCRVDW---HANDGILLKEVDRVLRPNGYFVYSAPP 332 (617)
Q Consensus 300 ~~l~h~---~~d~~~~L~el~RvLrPGG~Liis~p~ 332 (617)
.++++. .+++..+|.++.++|||||+++++++.
T Consensus 141 ~~l~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 176 (298)
T 1ri5_A 141 FSFHYAFSTSESLDIAQRNIARHLRPGGYFIMTVPS 176 (298)
T ss_dssp SCGGGGGSSHHHHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred chhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEECC
Confidence 877652 246788999999999999999999864
No 64
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=99.41 E-value=6.3e-13 Score=138.17 Aligned_cols=103 Identities=11% Similarity=0.083 Sum_probs=78.5
Q ss_pred CCCCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHh----CCC-------cEEEEecC------CCC--C
Q 039518 227 AGVFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALER----GIG-------AMISALST------KQL--P 287 (617)
Q Consensus 227 ~~g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~er----g~~-------~~~~~~d~------~~L--p 287 (617)
.++.+|||||||+|..+..++..+.. .++++|+|+.+++.|+++ +.. +.+.+.++ +.+ +
T Consensus 47 ~~~~~VLDlGCG~G~~l~~~~~~~~~--~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~~~ 124 (302)
T 2vdw_A 47 SNKRKVLAIDFGNGADLEKYFYGEIA--LLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSSVREV 124 (302)
T ss_dssp CSCCEEEETTCTTTTTHHHHHHTTCS--EEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHHHHTT
T ss_pred CCCCeEEEEecCCcHhHHHHHhcCCC--eEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcccchhhhhhhcc
Confidence 35788999999999766655555432 688999999999999886 221 34556655 323 3
Q ss_pred CCCCCeeEEEecccccccc--cchHHHHHHHHHhccCCeEEEEEeC
Q 039518 288 YPSSSFEMVHCSRCRVDWH--ANDGILLKEVDRVLRPNGYFVYSAP 331 (617)
Q Consensus 288 f~d~sFDlV~~s~~l~h~~--~d~~~~L~el~RvLrPGG~Liis~p 331 (617)
+++++||+|+|..++++.. ++...+|+++.|+|||||+|+++++
T Consensus 125 ~~~~~FD~V~~~~~lhy~~~~~~~~~~l~~~~r~LkpGG~~i~~~~ 170 (302)
T 2vdw_A 125 FYFGKFNIIDWQFAIHYSFHPRHYATVMNNLSELTASGGKVLITTM 170 (302)
T ss_dssp CCSSCEEEEEEESCGGGTCSTTTHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred ccCCCeeEEEECchHHHhCCHHHHHHHHHHHHHHcCCCCEEEEEeC
Confidence 5678999999998765532 3567899999999999999999886
No 65
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.40 E-value=6.8e-13 Score=136.16 Aligned_cols=100 Identities=14% Similarity=0.113 Sum_probs=85.6
Q ss_pred CCCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHh-------CCCcEEEEecCCCCCCCC------CCee
Q 039518 228 GVFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALER-------GIGAMISALSTKQLPYPS------SSFE 294 (617)
Q Consensus 228 ~g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~er-------g~~~~~~~~d~~~Lpf~d------~sFD 294 (617)
++.+|||||||+|.++..|++.......++++|+++.+++.|+++ ..++.+.++|++.+++++ ++||
T Consensus 36 ~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD 115 (299)
T 3g5t_A 36 ERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSPDTYKNVSFKISSSDDFKFLGADSVDKQKID 115 (299)
T ss_dssp CCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC-CCTTEEEEECCTTCCGGGCTTTTTSSCEE
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhccCCCCceEEEEcCHHhCCccccccccCCCee
Confidence 566799999999999999995311123678899999999999886 457889999999998877 8999
Q ss_pred EEEecccccccccchHHHHHHHHHhccCCeEEEEE
Q 039518 295 MVHCSRCRVDWHANDGILLKEVDRVLRPNGYFVYS 329 (617)
Q Consensus 295 lV~~s~~l~h~~~d~~~~L~el~RvLrPGG~Liis 329 (617)
+|+++.+++|+ ++..++.++.++|||||.+++.
T Consensus 116 ~V~~~~~l~~~--~~~~~l~~~~~~LkpgG~l~i~ 148 (299)
T 3g5t_A 116 MITAVECAHWF--DFEKFQRSAYANLRKDGTIAIW 148 (299)
T ss_dssp EEEEESCGGGS--CHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEeHhhHHHHh--CHHHHHHHHHHhcCCCcEEEEE
Confidence 99999877776 8999999999999999999984
No 66
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=99.40 E-value=7.9e-13 Score=127.43 Aligned_cols=101 Identities=19% Similarity=0.143 Sum_probs=85.2
Q ss_pred CCCeEEEECCCCcHH-HHHhccCCCcEEEeeecCCcHHHHHHHHHh----CCCcEEEEecCCCCCCCCCCeeEEEecccc
Q 039518 228 GVFQVLDVGCGVASF-SAFLLPLDIQTMSFAPKDGHENQIQFALER----GIGAMISALSTKQLPYPSSSFEMVHCSRCR 302 (617)
Q Consensus 228 ~g~rVLDIGCGtG~~-a~~La~~gv~~v~v~~iDis~~~lq~A~er----g~~~~~~~~d~~~Lpf~d~sFDlV~~s~~l 302 (617)
++.+|||+|||+|.+ ...++..+. .++++|+++.+++.|+++ +.++.+..+|+..+++++++||+|+++.++
T Consensus 23 ~~~~vLDiGcG~G~~~~~~~~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l 99 (209)
T 2p8j_A 23 LDKTVLDCGAGGDLPPLSIFVEDGY---KTYGIEISDLQLKKAENFSRENNFKLNISKGDIRKLPFKDESMSFVYSYGTI 99 (209)
T ss_dssp SCSEEEEESCCSSSCTHHHHHHTTC---EEEEEECCHHHHHHHHHHHHHHTCCCCEEECCTTSCCSCTTCEEEEEECSCG
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCC---EEEEEECCHHHHHHHHHHHHhcCCceEEEECchhhCCCCCCceeEEEEcChH
Confidence 456799999999987 445555554 678889999999988765 566888899999999989999999999888
Q ss_pred cccc-cchHHHHHHHHHhccCCeEEEEEeC
Q 039518 303 VDWH-ANDGILLKEVDRVLRPNGYFVYSAP 331 (617)
Q Consensus 303 ~h~~-~d~~~~L~el~RvLrPGG~Liis~p 331 (617)
+|+. +++..+++++.++|||||+++++..
T Consensus 100 ~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 129 (209)
T 2p8j_A 100 FHMRKNDVKEAIDEIKRVLKPGGLACINFL 129 (209)
T ss_dssp GGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred HhCCHHHHHHHHHHHHHHcCCCcEEEEEEe
Confidence 8874 5688899999999999999999875
No 67
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.40 E-value=6.7e-13 Score=126.03 Aligned_cols=102 Identities=15% Similarity=0.065 Sum_probs=78.4
Q ss_pred CCCCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHh----C-CCcEEEEecCCCCC-CCCCCeeEEEecc
Q 039518 227 AGVFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALER----G-IGAMISALSTKQLP-YPSSSFEMVHCSR 300 (617)
Q Consensus 227 ~~g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~er----g-~~~~~~~~d~~~Lp-f~d~sFDlV~~s~ 300 (617)
.++.+|||+|||+|.++..|++++. .++++|+++.+++.|+++ + .++.+...+.+.++ +.+++||+|+++.
T Consensus 21 ~~~~~vLDiGcG~G~~~~~la~~~~---~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~~~~~l~~~~~~~fD~v~~~~ 97 (185)
T 3mti_A 21 DDESIVVDATMGNGNDTAFLAGLSK---KVYAFDVQEQALGKTSQRLSDLGIENTELILDGHENLDHYVREPIRAAIFNL 97 (185)
T ss_dssp CTTCEEEESCCTTSHHHHHHHTTSS---EEEEEESCHHHHHHHHHHHHHHTCCCEEEEESCGGGGGGTCCSCEEEEEEEE
T ss_pred CCCCEEEEEcCCCCHHHHHHHHhCC---EEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCcHHHHHhhccCCcCEEEEeC
Confidence 4567899999999999999998843 678889999999999876 4 35677776666653 4578899999873
Q ss_pred ccccc--------ccchHHHHHHHHHhccCCeEEEEEeC
Q 039518 301 CRVDW--------HANDGILLKEVDRVLRPNGYFVYSAP 331 (617)
Q Consensus 301 ~l~h~--------~~d~~~~L~el~RvLrPGG~Liis~p 331 (617)
..++. ..+...++.++.++|||||.+++...
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 136 (185)
T 3mti_A 98 GYLPSADKSVITKPHTTLEAIEKILDRLEVGGRLAIMIY 136 (185)
T ss_dssp C-----------CHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred CCCCCcchhcccChhhHHHHHHHHHHhcCCCcEEEEEEe
Confidence 33222 23456789999999999999999874
No 68
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=99.40 E-value=1.5e-12 Score=128.32 Aligned_cols=118 Identities=18% Similarity=0.292 Sum_probs=97.2
Q ss_pred CCCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHhCCCcEEEEecC-CCCCCC-CCCeeEEEeccccccc
Q 039518 228 GVFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALERGIGAMISALST-KQLPYP-SSSFEMVHCSRCRVDW 305 (617)
Q Consensus 228 ~g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~erg~~~~~~~~d~-~~Lpf~-d~sFDlV~~s~~l~h~ 305 (617)
++.+|||||||+|.++..|++.+. .++++|+++.+++.|+++..++.+..+|+ +.+|++ +++||+|+++
T Consensus 48 ~~~~vLDiGcG~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~~~fD~v~~~------ 118 (226)
T 3m33_A 48 PQTRVLEAGCGHGPDAARFGPQAA---RWAAYDFSPELLKLARANAPHADVYEWNGKGELPAGLGAPFGLIVSR------ 118 (226)
T ss_dssp TTCEEEEESCTTSHHHHHHGGGSS---EEEEEESCHHHHHHHHHHCTTSEEEECCSCSSCCTTCCCCEEEEEEE------
T ss_pred CCCeEEEeCCCCCHHHHHHHHcCC---EEEEEECCHHHHHHHHHhCCCceEEEcchhhccCCcCCCCEEEEEeC------
Confidence 456799999999999999999864 67888999999999999977889999998 678888 8999999986
Q ss_pred ccchHHHHHHHHHhccCCeEEEEEeCCCCCCCCCChhhHHHHHHHHHHcCceEEEEeee
Q 039518 306 HANDGILLKEVDRVLRPNGYFVYSAPPAYRKDKDYPLIWDKLVNLTTAMCWKLIARKIQ 364 (617)
Q Consensus 306 ~~d~~~~L~el~RvLrPGG~Liis~p~~~~~~~~~~~~W~~le~La~~~gw~~v~~~~~ 364 (617)
.++..++.++.++|||||.++...... . ...+.+.+++.||+.+.....
T Consensus 119 -~~~~~~l~~~~~~LkpgG~l~~~~~~~----~-----~~~~~~~l~~~Gf~~~~~~~~ 167 (226)
T 3m33_A 119 -RGPTSVILRLPELAAPDAHFLYVGPRL----N-----VPEVPERLAAVGWDIVAEDHV 167 (226)
T ss_dssp -SCCSGGGGGHHHHEEEEEEEEEEESSS----C-----CTHHHHHHHHTTCEEEEEEEE
T ss_pred -CCHHHHHHHHHHHcCCCcEEEEeCCcC----C-----HHHHHHHHHHCCCeEEEEEee
Confidence 266788999999999999999433211 0 234778889999998876544
No 69
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=99.39 E-value=7.4e-13 Score=127.55 Aligned_cols=102 Identities=22% Similarity=0.240 Sum_probs=86.9
Q ss_pred CCCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHhC---CCcEEEEecCCCCCCCCCCeeEEEecccccc
Q 039518 228 GVFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALERG---IGAMISALSTKQLPYPSSSFEMVHCSRCRVD 304 (617)
Q Consensus 228 ~g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~erg---~~~~~~~~d~~~Lpf~d~sFDlV~~s~~l~h 304 (617)
++.+|||+|||+|.++..+++.+.. .++++|+++.+++.|+++. .++.+..+|+..+++++++||+|+++.++.+
T Consensus 42 ~~~~vLdiGcG~G~~~~~l~~~~~~--~v~~~D~s~~~~~~a~~~~~~~~~i~~~~~d~~~~~~~~~~fD~v~~~~~~~~ 119 (215)
T 2pxx_A 42 PEDRILVLGCGNSALSYELFLGGFP--NVTSVDYSSVVVAAMQACYAHVPQLRWETMDVRKLDFPSASFDVVLEKGTLDA 119 (215)
T ss_dssp TTCCEEEETCTTCSHHHHHHHTTCC--CEEEEESCHHHHHHHHHHTTTCTTCEEEECCTTSCCSCSSCEEEEEEESHHHH
T ss_pred CCCeEEEECCCCcHHHHHHHHcCCC--cEEEEeCCHHHHHHHHHhcccCCCcEEEEcchhcCCCCCCcccEEEECcchhh
Confidence 4567999999999999999988753 6788899999999999874 3578889999889988899999999876654
Q ss_pred cc--------------cchHHHHHHHHHhccCCeEEEEEeC
Q 039518 305 WH--------------ANDGILLKEVDRVLRPNGYFVYSAP 331 (617)
Q Consensus 305 ~~--------------~d~~~~L~el~RvLrPGG~Liis~p 331 (617)
.. .+...++.++.++|||||.+++.++
T Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~ 160 (215)
T 2pxx_A 120 LLAGERDPWTVSSEGVHTVDQVLSEVSRVLVPGGRFISMTS 160 (215)
T ss_dssp HTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEEEEEEEEES
T ss_pred hccccccccccccchhHHHHHHHHHHHHhCcCCCEEEEEeC
Confidence 42 3457899999999999999999886
No 70
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.39 E-value=3.7e-13 Score=134.42 Aligned_cols=143 Identities=15% Similarity=0.170 Sum_probs=97.1
Q ss_pred HHHHHHHhhhhhccCCcccCCCCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHh----CCCcEEEEecC
Q 039518 208 EYIQRLGNMMTNETGNLRSAGVFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALER----GIGAMISALST 283 (617)
Q Consensus 208 ~Y~~~L~~~L~~~~~~lr~~~g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~er----g~~~~~~~~d~ 283 (617)
.+.+.+.+.+. .+|.+|||||||+|..+.++++..+. +++++|+++.+++.|+++ +..+.+..++.
T Consensus 48 ~~m~~~a~~~~--------~~G~rVLdiG~G~G~~~~~~~~~~~~--~v~~id~~~~~~~~a~~~~~~~~~~~~~~~~~a 117 (236)
T 3orh_A 48 PYMHALAAAAS--------SKGGRVLEVGFGMAIAASKVQEAPID--EHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLW 117 (236)
T ss_dssp HHHHHHHHHHT--------TTCEEEEEECCTTSHHHHHHTTSCEE--EEEEEECCHHHHHHHHHHGGGCSSEEEEEESCH
T ss_pred HHHHHHHHhhc--------cCCCeEEEECCCccHHHHHHHHhCCc--EEEEEeCCHHHHHHHHHHHhhCCCceEEEeehH
Confidence 45555555543 35667999999999999999887643 788999999999999986 44566777765
Q ss_pred CCC--CCCCCCeeEEEe-----cccccccccchHHHHHHHHHhccCCeEEEEEeCCC---CCCC--CCChhhHH-HHHHH
Q 039518 284 KQL--PYPSSSFEMVHC-----SRCRVDWHANDGILLKEVDRVLRPNGYFVYSAPPA---YRKD--KDYPLIWD-KLVNL 350 (617)
Q Consensus 284 ~~L--pf~d~sFDlV~~-----s~~l~h~~~d~~~~L~el~RvLrPGG~Liis~p~~---~~~~--~~~~~~W~-~le~L 350 (617)
+.+ ++++++||.|+. ....+|.. ++..++.++.|+|||||.|++..... .... ......+. .....
T Consensus 118 ~~~~~~~~~~~FD~i~~D~~~~~~~~~~~~-~~~~~~~e~~rvLkPGG~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (236)
T 3orh_A 118 EDVAPTLPDGHFDGILYDTYPLSEETWHTH-QFNFIKNHAFRLLKPGGVLTYCNLTSWGELMKSKYSDITIMFEETQVPA 196 (236)
T ss_dssp HHHGGGSCTTCEEEEEECCCCCBGGGTTTH-HHHHHHHTHHHHEEEEEEEEECCHHHHHHHTTTTCSCHHHHHHHHTHHH
T ss_pred HhhcccccccCCceEEEeeeecccchhhhc-chhhhhhhhhheeCCCCEEEEEecCCchhhhhhhhhhhhhhhHHHHHHH
Confidence 443 578899999974 33334433 78899999999999999998853100 0000 01111122 24556
Q ss_pred HHHcCceEEEE
Q 039518 351 TTAMCWKLIAR 361 (617)
Q Consensus 351 a~~~gw~~v~~ 361 (617)
+.+.||+....
T Consensus 197 L~eaGF~~~~i 207 (236)
T 3orh_A 197 LLEAGFRRENI 207 (236)
T ss_dssp HHHHTCCGGGE
T ss_pred HHHcCCeEEEE
Confidence 67789986553
No 71
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=99.39 E-value=8.7e-13 Score=131.61 Aligned_cols=134 Identities=10% Similarity=0.121 Sum_probs=100.3
Q ss_pred CCCCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHhCC--C-----------------------------
Q 039518 227 AGVFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALERGI--G----------------------------- 275 (617)
Q Consensus 227 ~~g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~erg~--~----------------------------- 275 (617)
.++.+|||+|||+|.++..+++.+. ..++++|+++.+++.|+++.. +
T Consensus 55 ~~~~~vLDlGcG~G~~~~~l~~~~~--~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 132 (265)
T 2i62_A 55 VKGELLIDIGSGPTIYQLLSACESF--TEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEKL 132 (265)
T ss_dssp CCEEEEEEESCTTCCGGGTTGGGTE--EEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHHH
T ss_pred cCCCEEEEECCCccHHHHHHhhccc--CeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHHHHh
Confidence 3567899999999999999888765 478899999999999987622 1
Q ss_pred ---c-EEEEecCCCCC-CCC---CCeeEEEecccccccc---cchHHHHHHHHHhccCCeEEEEEeCCCCC--CC-----
Q 039518 276 ---A-MISALSTKQLP-YPS---SSFEMVHCSRCRVDWH---ANDGILLKEVDRVLRPNGYFVYSAPPAYR--KD----- 337 (617)
Q Consensus 276 ---~-~~~~~d~~~Lp-f~d---~sFDlV~~s~~l~h~~---~d~~~~L~el~RvLrPGG~Liis~p~~~~--~~----- 337 (617)
+ .+..+|+..++ +++ ++||+|+++.++++.. .++..+|.++.++|||||+|+++++.... ..
T Consensus 133 ~~~v~~~~~~d~~~~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~~~~~~~~~~~ 212 (265)
T 2i62_A 133 RRAIKQVLKCDVTQSQPLGGVSLPPADCLLSTLCLDAACPDLPAYRTALRNLGSLLKPGGFLVMVDALKSSYYMIGEQKF 212 (265)
T ss_dssp HHHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEESSCCEEEETTEEE
T ss_pred hhhheeEEEeeeccCCCCCccccCCccEEEEhhhhhhhcCChHHHHHHHHHHHhhCCCCcEEEEEecCCCceEEcCCccc
Confidence 5 77888887654 355 8999999998887433 36788999999999999999998742210 00
Q ss_pred CCChhhHHHHHHHHHHcCceEEEEe
Q 039518 338 KDYPLIWDKLVNLTTAMCWKLIARK 362 (617)
Q Consensus 338 ~~~~~~W~~le~La~~~gw~~v~~~ 362 (617)
......-+.+.+++++.||+++...
T Consensus 213 ~~~~~~~~~~~~~l~~aGf~~~~~~ 237 (265)
T 2i62_A 213 SSLPLGWETVRDAVEEAGYTIEQFE 237 (265)
T ss_dssp ECCCCCHHHHHHHHHHTTCEEEEEE
T ss_pred cccccCHHHHHHHHHHCCCEEEEEE
Confidence 0001113468899999999988754
No 72
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=99.38 E-value=8.8e-13 Score=134.67 Aligned_cols=133 Identities=13% Similarity=0.075 Sum_probs=92.3
Q ss_pred CCCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHhCC---------------------------------
Q 039518 228 GVFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALERGI--------------------------------- 274 (617)
Q Consensus 228 ~g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~erg~--------------------------------- 274 (617)
++.+|||||||+|.++..++.... ..++++|+++.+++.|+++..
T Consensus 71 ~~~~vLDiGcG~G~~~~l~~~~~~--~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 148 (289)
T 2g72_A 71 SGRTLIDIGSGPTVYQLLSACSHF--EDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKGECWQDKERQLR 148 (289)
T ss_dssp CCSEEEEETCTTCCGGGTTGGGGC--SEEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCSCCCHHHHHHHHH
T ss_pred CCCeEEEECCCcChHHHHhhccCC--CeEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcCcccchhhhHHHHH
Confidence 567899999999995544443222 278899999999998877311
Q ss_pred --CcEEEEecCCC-CCC-----CCCCeeEEEecccccccc---cchHHHHHHHHHhccCCeEEEEEeCCC-CC-CCC---
Q 039518 275 --GAMISALSTKQ-LPY-----PSSSFEMVHCSRCRVDWH---ANDGILLKEVDRVLRPNGYFVYSAPPA-YR-KDK--- 338 (617)
Q Consensus 275 --~~~~~~~d~~~-Lpf-----~d~sFDlV~~s~~l~h~~---~d~~~~L~el~RvLrPGG~Liis~p~~-~~-~~~--- 338 (617)
.+.+..+|+.. +|+ ++++||+|+|+.++++.. +++..+|+++.|+|||||+|+++.... .+ ...
T Consensus 149 ~~~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~r~LkpGG~l~~~~~~~~~~~~~~~~~ 228 (289)
T 2g72_A 149 ARVKRVLPIDVHQPQPLGAGSPAPLPADALVSAFCLEAVSPDLASFQRALDHITTLLRPGGHLLLIGALEESWYLAGEAR 228 (289)
T ss_dssp HHEEEEECCCTTSSSTTCSSCSSCSSEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEEESCCEEEETTEE
T ss_pred hhhceEEecccCCCCCccccccCCCCCCEEEehhhhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEEecCcceEEcCCee
Confidence 02345557766 664 356799999998877743 368899999999999999999974211 00 000
Q ss_pred --CChhhHHHHHHHHHHcCceEEEEe
Q 039518 339 --DYPLIWDKLVNLTTAMCWKLIARK 362 (617)
Q Consensus 339 --~~~~~W~~le~La~~~gw~~v~~~ 362 (617)
.....-+.+.+++++.||+++...
T Consensus 229 ~~~~~~~~~~l~~~l~~aGf~~~~~~ 254 (289)
T 2g72_A 229 LTVVPVSEEEVREALVRSGYKVRDLR 254 (289)
T ss_dssp EECCCCCHHHHHHHHHHTTEEEEEEE
T ss_pred eeeccCCHHHHHHHHHHcCCeEEEee
Confidence 001124568899999999988743
No 73
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.37 E-value=4.2e-12 Score=129.12 Aligned_cols=100 Identities=19% Similarity=0.278 Sum_probs=85.5
Q ss_pred CCCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHh----CCCcEEEEecCCCCCCCCCCeeEEEeccccc
Q 039518 228 GVFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALER----GIGAMISALSTKQLPYPSSSFEMVHCSRCRV 303 (617)
Q Consensus 228 ~g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~er----g~~~~~~~~d~~~Lpf~d~sFDlV~~s~~l~ 303 (617)
++.+|||+|||+|.++..|++++. .++++|+++.+++.|+++ +.++.+..+|+..+++ +++||+|+++.+++
T Consensus 120 ~~~~vLD~GcG~G~~~~~l~~~g~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~-~~~fD~i~~~~~~~ 195 (286)
T 3m70_A 120 SPCKVLDLGCGQGRNSLYLSLLGY---DVTSWDHNENSIAFLNETKEKENLNISTALYDINAANI-QENYDFIVSTVVFM 195 (286)
T ss_dssp CSCEEEEESCTTCHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCGGGCCC-CSCEEEEEECSSGG
T ss_pred CCCcEEEECCCCCHHHHHHHHCCC---eEEEEECCHHHHHHHHHHHHHcCCceEEEEeccccccc-cCCccEEEEccchh
Confidence 455799999999999999999865 678889999999988775 5578899999988887 78899999998887
Q ss_pred ccc-cchHHHHHHHHHhccCCeEEEEEeC
Q 039518 304 DWH-ANDGILLKEVDRVLRPNGYFVYSAP 331 (617)
Q Consensus 304 h~~-~d~~~~L~el~RvLrPGG~Liis~p 331 (617)
|+. ++...++.++.++|+|||.+++...
T Consensus 196 ~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 224 (286)
T 3m70_A 196 FLNRERVPSIIKNMKEHTNVGGYNLIVAA 224 (286)
T ss_dssp GSCGGGHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred hCCHHHHHHHHHHHHHhcCCCcEEEEEEe
Confidence 775 3456899999999999999888653
No 74
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.35 E-value=1.7e-11 Score=118.42 Aligned_cols=121 Identities=15% Similarity=0.060 Sum_probs=94.0
Q ss_pred cCCCCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHh----CC-CcEEEEecCCCCCCCCCCeeEEEecc
Q 039518 226 SAGVFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALER----GI-GAMISALSTKQLPYPSSSFEMVHCSR 300 (617)
Q Consensus 226 ~~~g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~er----g~-~~~~~~~d~~~Lpf~d~sFDlV~~s~ 300 (617)
..++.+|||+|||+|.++..+++.+.. ..++++|+++.+++.|+++ +. ++.+..+|+.......++||+|++..
T Consensus 38 ~~~~~~vLDiG~G~G~~~~~la~~~~~-~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D~i~~~~ 116 (204)
T 3e05_A 38 LQDDLVMWDIGAGSASVSIEASNLMPN-GRIFALERNPQYLGFIRDNLKKFVARNVTLVEAFAPEGLDDLPDPDRVFIGG 116 (204)
T ss_dssp CCTTCEEEEETCTTCHHHHHHHHHCTT-SEEEEEECCHHHHHHHHHHHHHHTCTTEEEEECCTTTTCTTSCCCSEEEESC
T ss_pred CCCCCEEEEECCCCCHHHHHHHHHCCC-CEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeCChhhhhhcCCCCCEEEECC
Confidence 345678999999999999999988632 2788899999999999875 43 47788888755443447799999876
Q ss_pred cccccccchHHHHHHHHHhccCCeEEEEEeCCCCCCCCCChhhHHHHHHHHHHcCceEE
Q 039518 301 CRVDWHANDGILLKEVDRVLRPNGYFVYSAPPAYRKDKDYPLIWDKLVNLTTAMCWKLI 359 (617)
Q Consensus 301 ~l~h~~~d~~~~L~el~RvLrPGG~Liis~p~~~~~~~~~~~~W~~le~La~~~gw~~v 359 (617)
... +...++.++.++|+|||.+++..+.. ...+.+.+.+++.||...
T Consensus 117 ~~~----~~~~~l~~~~~~LkpgG~l~~~~~~~--------~~~~~~~~~l~~~g~~~~ 163 (204)
T 3e05_A 117 SGG----MLEEIIDAVDRRLKSEGVIVLNAVTL--------DTLTKAVEFLEDHGYMVE 163 (204)
T ss_dssp CTT----CHHHHHHHHHHHCCTTCEEEEEECBH--------HHHHHHHHHHHHTTCEEE
T ss_pred CCc----CHHHHHHHHHHhcCCCeEEEEEeccc--------ccHHHHHHHHHHCCCcee
Confidence 432 67899999999999999999987521 225568888899999433
No 75
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=99.34 E-value=3.2e-12 Score=124.21 Aligned_cols=111 Identities=17% Similarity=0.242 Sum_probs=89.1
Q ss_pred CCCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHhCCCcEEEEecCCCCCCCCCCeeEEEeccccccccc
Q 039518 228 GVFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALERGIGAMISALSTKQLPYPSSSFEMVHCSRCRVDWHA 307 (617)
Q Consensus 228 ~g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~erg~~~~~~~~d~~~Lpf~d~sFDlV~~s~~l~h~~~ 307 (617)
++.+|||||||+|.++..++ . .++++|+++. .+.+..+|+..+|+++++||+|+++.+++ + .
T Consensus 67 ~~~~vLDiG~G~G~~~~~l~---~---~v~~~D~s~~----------~~~~~~~d~~~~~~~~~~fD~v~~~~~l~-~-~ 128 (215)
T 2zfu_A 67 ASLVVADFGCGDCRLASSIR---N---PVHCFDLASL----------DPRVTVCDMAQVPLEDESVDVAVFCLSLM-G-T 128 (215)
T ss_dssp TTSCEEEETCTTCHHHHHCC---S---CEEEEESSCS----------STTEEESCTTSCSCCTTCEEEEEEESCCC-S-S
T ss_pred CCCeEEEECCcCCHHHHHhh---c---cEEEEeCCCC----------CceEEEeccccCCCCCCCEeEEEEehhcc-c-c
Confidence 45679999999999999884 1 4566677765 46678889988999899999999998774 4 5
Q ss_pred chHHHHHHHHHhccCCeEEEEEeCCCCCCCCCChhhHHHHHHHHHHcCceEEEEe
Q 039518 308 NDGILLKEVDRVLRPNGYFVYSAPPAYRKDKDYPLIWDKLVNLTTAMCWKLIARK 362 (617)
Q Consensus 308 d~~~~L~el~RvLrPGG~Liis~p~~~~~~~~~~~~W~~le~La~~~gw~~v~~~ 362 (617)
++..++.++.++|+|||+++++++..... .-+.+.+++++.||+++...
T Consensus 129 ~~~~~l~~~~~~L~~gG~l~i~~~~~~~~------~~~~~~~~l~~~Gf~~~~~~ 177 (215)
T 2zfu_A 129 NIRDFLEEANRVLKPGGLLKVAEVSSRFE------DVRTFLRAVTKLGFKIVSKD 177 (215)
T ss_dssp CHHHHHHHHHHHEEEEEEEEEEECGGGCS------CHHHHHHHHHHTTEEEEEEE
T ss_pred CHHHHHHHHHHhCCCCeEEEEEEcCCCCC------CHHHHHHHHHHCCCEEEEEe
Confidence 89999999999999999999987532211 14568899999999988744
No 76
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.34 E-value=9.7e-12 Score=121.40 Aligned_cols=125 Identities=14% Similarity=0.222 Sum_probs=95.9
Q ss_pred CCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHh----CC-CcEEEEecCCCCC--CCCCCeeEEEeccc
Q 039518 229 VFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALER----GI-GAMISALSTKQLP--YPSSSFEMVHCSRC 301 (617)
Q Consensus 229 g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~er----g~-~~~~~~~d~~~Lp--f~d~sFDlV~~s~~ 301 (617)
+.+|||||||+|.++..+++.... ..+.++|+++.+++.|+++ +. ++.+..+|+..++ +++++||+|+++..
T Consensus 42 ~~~vLDiGcG~G~~~~~la~~~p~-~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~D~i~~~~~ 120 (214)
T 1yzh_A 42 NPIHVEVGSGKGAFVSGMAKQNPD-INYIGIDIQKSVLSYALDKVLEVGVPNIKLLWVDGSDLTDYFEDGEIDRLYLNFS 120 (214)
T ss_dssp CCEEEEESCTTSHHHHHHHHHCTT-SEEEEEESCHHHHHHHHHHHHHHCCSSEEEEECCSSCGGGTSCTTCCSEEEEESC
T ss_pred CCeEEEEccCcCHHHHHHHHHCCC-CCEEEEEcCHHHHHHHHHHHHHcCCCCEEEEeCCHHHHHhhcCCCCCCEEEEECC
Confidence 456999999999999999887532 2688899999999988875 43 5788889988877 77889999998753
Q ss_pred cccccc--------chHHHHHHHHHhccCCeEEEEEeCCCCCCCCCChhhHHHHHHHHHHcCceEEEEee
Q 039518 302 RVDWHA--------NDGILLKEVDRVLRPNGYFVYSAPPAYRKDKDYPLIWDKLVNLTTAMCWKLIARKI 363 (617)
Q Consensus 302 l~h~~~--------d~~~~L~el~RvLrPGG~Liis~p~~~~~~~~~~~~W~~le~La~~~gw~~v~~~~ 363 (617)
.+|.. ....++.++.++|+|||.+++.+.. ....+.+.+++++.||+.+....
T Consensus 121 -~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~--------~~~~~~~~~~~~~~g~~~~~~~~ 181 (214)
T 1yzh_A 121 -DPWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFKTDN--------RGLFEYSLVSFSQYGMKLNGVWL 181 (214)
T ss_dssp -CCCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEEESC--------HHHHHHHHHHHHHHTCEEEEEES
T ss_pred -CCccccchhhhccCCHHHHHHHHHHcCCCcEEEEEeCC--------HHHHHHHHHHHHHCCCeeeeccc
Confidence 23321 1257999999999999999998631 11245577778888998876443
No 77
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.34 E-value=1.2e-12 Score=129.65 Aligned_cols=100 Identities=15% Similarity=0.130 Sum_probs=81.0
Q ss_pred CCCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHhC----CCcEEEEecCCCC--CCCCCCeeEEEe-cc
Q 039518 228 GVFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALERG----IGAMISALSTKQL--PYPSSSFEMVHC-SR 300 (617)
Q Consensus 228 ~g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~erg----~~~~~~~~d~~~L--pf~d~sFDlV~~-s~ 300 (617)
++.+|||||||+|.++..|++.+.. .++++|+++.+++.|+++. .++.+..+|++++ ++++++||+|++ .+
T Consensus 60 ~~~~vLDiGcGtG~~~~~l~~~~~~--~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~V~~d~~ 137 (236)
T 1zx0_A 60 KGGRVLEVGFGMAIAASKVQEAPID--EHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAPTLPDGHFDGILYDTY 137 (236)
T ss_dssp TCEEEEEECCTTSHHHHHHHTSCEE--EEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHGGGSCTTCEEEEEECCC
T ss_pred CCCeEEEEeccCCHHHHHHHhcCCC--eEEEEcCCHHHHHHHHHHHHhcCCCeEEEecCHHHhhcccCCCceEEEEECCc
Confidence 4567999999999999999776542 7889999999999998863 5578888888887 888999999998 44
Q ss_pred cccccc----cchHHHHHHHHHhccCCeEEEEEe
Q 039518 301 CRVDWH----ANDGILLKEVDRVLRPNGYFVYSA 330 (617)
Q Consensus 301 ~l~h~~----~d~~~~L~el~RvLrPGG~Liis~ 330 (617)
.+ +.. .+...++.++.|+|||||+|++..
T Consensus 138 ~~-~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~ 170 (236)
T 1zx0_A 138 PL-SEETWHTHQFNFIKNHAFRLLKPGGVLTYCN 170 (236)
T ss_dssp CC-BGGGTTTHHHHHHHHTHHHHEEEEEEEEECC
T ss_pred cc-chhhhhhhhHHHHHHHHHHhcCCCeEEEEEe
Confidence 32 211 234578999999999999999864
No 78
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.33 E-value=3.8e-12 Score=128.32 Aligned_cols=122 Identities=11% Similarity=0.112 Sum_probs=94.3
Q ss_pred CCCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHh----CC--CcEEEEecCCCCC--CCCCCeeEEEec
Q 039518 228 GVFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALER----GI--GAMISALSTKQLP--YPSSSFEMVHCS 299 (617)
Q Consensus 228 ~g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~er----g~--~~~~~~~d~~~Lp--f~d~sFDlV~~s 299 (617)
++.+|||+|||+|.++..+++++.. .++++|+++.+++.|+++ +. ++.+..+|+.+++ +++++||+|+++
T Consensus 49 ~~~~vLDlG~G~G~~~~~la~~~~~--~v~gvDi~~~~~~~a~~n~~~~~~~~~v~~~~~D~~~~~~~~~~~~fD~Ii~n 126 (259)
T 3lpm_A 49 RKGKIIDLCSGNGIIPLLLSTRTKA--KIVGVEIQERLADMAKRSVAYNQLEDQIEIIEYDLKKITDLIPKERADIVTCN 126 (259)
T ss_dssp SCCEEEETTCTTTHHHHHHHTTCCC--EEEEECCSHHHHHHHHHHHHHTTCTTTEEEECSCGGGGGGTSCTTCEEEEEEC
T ss_pred CCCEEEEcCCchhHHHHHHHHhcCC--cEEEEECCHHHHHHHHHHHHHCCCcccEEEEECcHHHhhhhhccCCccEEEEC
Confidence 5678999999999999999988653 788999999999999876 43 3788888887765 557899999997
Q ss_pred cccccc-------------------ccchHHHHHHHHHhccCCeEEEEEeCCCCCCCCCChhhHHHHHHHHHHcCceEEE
Q 039518 300 RCRVDW-------------------HANDGILLKEVDRVLRPNGYFVYSAPPAYRKDKDYPLIWDKLVNLTTAMCWKLIA 360 (617)
Q Consensus 300 ~~l~h~-------------------~~d~~~~L~el~RvLrPGG~Liis~p~~~~~~~~~~~~W~~le~La~~~gw~~v~ 360 (617)
...... ..+...++.++.++|||||.+++..++.. ..++...+++.+|....
T Consensus 127 pPy~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~---------~~~~~~~l~~~~~~~~~ 197 (259)
T 3lpm_A 127 PPYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANFVHRPER---------LLDIIDIMRKYRLEPKR 197 (259)
T ss_dssp CCC-----------------------HHHHHHHHHHHHHEEEEEEEEEEECTTT---------HHHHHHHHHHTTEEEEE
T ss_pred CCCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEEEEcHHH---------HHHHHHHHHHCCCceEE
Confidence 433222 01245799999999999999999765321 45677788888988765
No 79
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.33 E-value=3.8e-12 Score=130.97 Aligned_cols=103 Identities=17% Similarity=0.146 Sum_probs=82.4
Q ss_pred CCCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHhC----------------------------------
Q 039518 228 GVFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALERG---------------------------------- 273 (617)
Q Consensus 228 ~g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~erg---------------------------------- 273 (617)
++.+|||||||+|.++..|+++... ..++++|+++.+++.|+++.
T Consensus 46 ~~~~VLDiGCG~G~~~~~la~~~~~-~~v~gvDis~~~i~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 124 (292)
T 3g07_A 46 RGRDVLDLGCNVGHLTLSIACKWGP-SRMVGLDIDSRLIHSARQNIRHYLSEELRLPPQTLEGDPGAEGEEGTTTVRKRS 124 (292)
T ss_dssp TTSEEEEESCTTCHHHHHHHHHTCC-SEEEEEESCHHHHHHHHHTC----------------------------------
T ss_pred CCCcEEEeCCCCCHHHHHHHHHcCC-CEEEEECCCHHHHHHHHHHHHhhhhhhccccccccccccccccccccccccccc
Confidence 5678999999999999999987321 27889999999999998762
Q ss_pred -----------------------------CCcEEEEecCCCCC-----CCCCCeeEEEecccccccc-----cchHHHHH
Q 039518 274 -----------------------------IGAMISALSTKQLP-----YPSSSFEMVHCSRCRVDWH-----ANDGILLK 314 (617)
Q Consensus 274 -----------------------------~~~~~~~~d~~~Lp-----f~d~sFDlV~~s~~l~h~~-----~d~~~~L~ 314 (617)
.++.+..+|....+ +.+++||+|+|..++++++ ++...+++
T Consensus 125 ~~p~~~~~~~g~~~~p~~~~~~~~~~~~p~~v~f~~~d~~~~~~~~~~~~~~~fD~I~~~~vl~~ihl~~~~~~~~~~l~ 204 (292)
T 3g07_A 125 CFPASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRDDLVEAQTPEYDVVLCLSLTKWVHLNWGDEGLKRMFR 204 (292)
T ss_dssp -----------------CCSSTTCCSSTTTTEEEEECCCCCSSHHHHTTCCCCEEEEEEESCHHHHHHHHHHHHHHHHHH
T ss_pred cccchhhhccCccccccccccccccccccccceEEecccccCccccccccCCCcCEEEEChHHHHhhhcCCHHHHHHHHH
Confidence 24677777765443 5678999999998775542 25678999
Q ss_pred HHHHhccCCeEEEEEeC
Q 039518 315 EVDRVLRPNGYFVYSAP 331 (617)
Q Consensus 315 el~RvLrPGG~Liis~p 331 (617)
+++++|+|||+|++...
T Consensus 205 ~~~~~LkpGG~lil~~~ 221 (292)
T 3g07_A 205 RIYRHLRPGGILVLEPQ 221 (292)
T ss_dssp HHHHHEEEEEEEEEECC
T ss_pred HHHHHhCCCcEEEEecC
Confidence 99999999999999754
No 80
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.33 E-value=2.9e-12 Score=129.04 Aligned_cols=104 Identities=13% Similarity=0.040 Sum_probs=82.5
Q ss_pred cCCCCeEEEECCCCcHHHHHhccC-CCcEEEeeecCCcHH------HHHHHHHh----C--CCcEEEEec---CCCCCCC
Q 039518 226 SAGVFQVLDVGCGVASFSAFLLPL-DIQTMSFAPKDGHEN------QIQFALER----G--IGAMISALS---TKQLPYP 289 (617)
Q Consensus 226 ~~~g~rVLDIGCGtG~~a~~La~~-gv~~v~v~~iDis~~------~lq~A~er----g--~~~~~~~~d---~~~Lpf~ 289 (617)
+.++.+|||||||+|.++..++++ +.. ..++++|+++. +++.|+++ + .++.+..+| ...+|++
T Consensus 41 ~~~~~~vLDiGcG~G~~~~~l~~~~g~~-~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~ 119 (275)
T 3bkx_A 41 VKPGEKILEIGCGQGDLSAVLADQVGSS-GHVTGIDIASPDYGAPLTLGQAWNHLLAGPLGDRLTVHFNTNLSDDLGPIA 119 (275)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHHCTT-CEEEEECSSCTTCCSSSCHHHHHHHHHTSTTGGGEEEECSCCTTTCCGGGT
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHhCCC-CEEEEEECCccccccHHHHHHHHHHHHhcCCCCceEEEECChhhhccCCCC
Confidence 456778999999999999999987 332 26788899886 77887765 2 247777777 4566778
Q ss_pred CCCeeEEEecccccccccchHHHHHHHHHhccCCeEEEEEeC
Q 039518 290 SSSFEMVHCSRCRVDWHANDGILLKEVDRVLRPNGYFVYSAP 331 (617)
Q Consensus 290 d~sFDlV~~s~~l~h~~~d~~~~L~el~RvLrPGG~Liis~p 331 (617)
+++||+|+++.+++|+. ++..+++.+.++++|||++++.+.
T Consensus 120 ~~~fD~v~~~~~l~~~~-~~~~~~~~~~~l~~~gG~l~~~~~ 160 (275)
T 3bkx_A 120 DQHFDRVVLAHSLWYFA-SANALALLFKNMAAVCDHVDVAEW 160 (275)
T ss_dssp TCCCSEEEEESCGGGSS-CHHHHHHHHHHHTTTCSEEEEEEE
T ss_pred CCCEEEEEEccchhhCC-CHHHHHHHHHHHhCCCCEEEEEEe
Confidence 89999999999888776 677777777777888999999864
No 81
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.33 E-value=1.5e-11 Score=120.68 Aligned_cols=126 Identities=13% Similarity=0.131 Sum_probs=95.0
Q ss_pred CCCCeEEEECCC-CcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHh----CCCcEEEEecCCCC-CCCCCCeeEEEecc
Q 039518 227 AGVFQVLDVGCG-VASFSAFLLPLDIQTMSFAPKDGHENQIQFALER----GIGAMISALSTKQL-PYPSSSFEMVHCSR 300 (617)
Q Consensus 227 ~~g~rVLDIGCG-tG~~a~~La~~gv~~v~v~~iDis~~~lq~A~er----g~~~~~~~~d~~~L-pf~d~sFDlV~~s~ 300 (617)
.++.+|||+||| +|.++..+++.. ...++++|+++.+++.|+++ +.++.+..+|+..+ ++++++||+|+++.
T Consensus 54 ~~~~~vLDlG~G~~G~~~~~la~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~I~~np 131 (230)
T 3evz_A 54 RGGEVALEIGTGHTAMMALMAEKFF--NCKVTATEVDEEFFEYARRNIERNNSNVRLVKSNGGIIKGVVEGTFDVIFSAP 131 (230)
T ss_dssp CSSCEEEEECCTTTCHHHHHHHHHH--CCEEEEEECCHHHHHHHHHHHHHTTCCCEEEECSSCSSTTTCCSCEEEEEECC
T ss_pred CCCCEEEEcCCCHHHHHHHHHHHhc--CCEEEEEECCHHHHHHHHHHHHHhCCCcEEEeCCchhhhhcccCceeEEEECC
Confidence 356789999999 999999998873 23678889999999998865 55788888886433 45678999999875
Q ss_pred cccccc------------------cchHHHHHHHHHhccCCeEEEEEeCCCCCCCCCChhhHHHHHHHHHHcCceEEEE
Q 039518 301 CRVDWH------------------ANDGILLKEVDRVLRPNGYFVYSAPPAYRKDKDYPLIWDKLVNLTTAMCWKLIAR 361 (617)
Q Consensus 301 ~l~h~~------------------~d~~~~L~el~RvLrPGG~Liis~p~~~~~~~~~~~~W~~le~La~~~gw~~v~~ 361 (617)
..++.. +....++.++.++|||||++++..+.. ......+.+++++.||.....
T Consensus 132 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~-------~~~~~~~~~~l~~~g~~~~~~ 203 (230)
T 3evz_A 132 PYYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALYLPDK-------EKLLNVIKERGIKLGYSVKDI 203 (230)
T ss_dssp CCC---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEEEESC-------HHHHHHHHHHHHHTTCEEEEE
T ss_pred CCcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEEeccc-------HhHHHHHHHHHHHcCCceEEE
Confidence 443322 113678999999999999999976521 122456888889999976653
No 82
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.32 E-value=2.5e-11 Score=117.25 Aligned_cols=141 Identities=17% Similarity=0.135 Sum_probs=101.4
Q ss_pred ccCChhHHHHHHHhhhhhccCCcccCCCCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHh----CCC-c
Q 039518 202 FKHGAPEYIQRLGNMMTNETGNLRSAGVFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALER----GIG-A 276 (617)
Q Consensus 202 F~~~a~~Y~~~L~~~L~~~~~~lr~~~g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~er----g~~-~ 276 (617)
|..+.......+.+.+... ..++.+|||+|||+|.++..+++.+.. .+.++|+++.+++.|+++ +.. +
T Consensus 39 f~~~~~~~~~~~~~~l~~~-----~~~~~~vLDiG~G~G~~~~~l~~~~~~--~v~~vD~s~~~~~~a~~~~~~~~~~~v 111 (205)
T 3grz_A 39 FGTGNHQTTQLAMLGIERA-----MVKPLTVADVGTGSGILAIAAHKLGAK--SVLATDISDESMTAAEENAALNGIYDI 111 (205)
T ss_dssp ---CCHHHHHHHHHHHHHH-----CSSCCEEEEETCTTSHHHHHHHHTTCS--EEEEEESCHHHHHHHHHHHHHTTCCCC
T ss_pred cCCCCCccHHHHHHHHHHh-----ccCCCEEEEECCCCCHHHHHHHHCCCC--EEEEEECCHHHHHHHHHHHHHcCCCce
Confidence 4444444444444444321 134567999999999999999887542 678899999999999876 443 7
Q ss_pred EEEEecCCCCCCCCCCeeEEEecccccccccchHHHHHHHHHhccCCeEEEEEeCCCCCCCCCChhhHHHHHHHHHHcCc
Q 039518 277 MISALSTKQLPYPSSSFEMVHCSRCRVDWHANDGILLKEVDRVLRPNGYFVYSAPPAYRKDKDYPLIWDKLVNLTTAMCW 356 (617)
Q Consensus 277 ~~~~~d~~~Lpf~d~sFDlV~~s~~l~h~~~d~~~~L~el~RvLrPGG~Liis~p~~~~~~~~~~~~W~~le~La~~~gw 356 (617)
.+..+|+... .+++||+|+++..++ ....+++++.++|+|||++++++... ...+.+.+++++.||
T Consensus 112 ~~~~~d~~~~--~~~~fD~i~~~~~~~----~~~~~l~~~~~~L~~gG~l~~~~~~~--------~~~~~~~~~~~~~Gf 177 (205)
T 3grz_A 112 ALQKTSLLAD--VDGKFDLIVANILAE----ILLDLIPQLDSHLNEDGQVIFSGIDY--------LQLPKIEQALAENSF 177 (205)
T ss_dssp EEEESSTTTT--CCSCEEEEEEESCHH----HHHHHGGGSGGGEEEEEEEEEEEEEG--------GGHHHHHHHHHHTTE
T ss_pred EEEecccccc--CCCCceEEEECCcHH----HHHHHHHHHHHhcCCCCEEEEEecCc--------ccHHHHHHHHHHcCC
Confidence 7888877554 468999999876443 24678999999999999999975321 124568889999999
Q ss_pred eEEEEee
Q 039518 357 KLIARKI 363 (617)
Q Consensus 357 ~~v~~~~ 363 (617)
+.+....
T Consensus 178 ~~~~~~~ 184 (205)
T 3grz_A 178 QIDLKMR 184 (205)
T ss_dssp EEEEEEE
T ss_pred ceEEeec
Confidence 9887543
No 83
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=99.32 E-value=3.6e-12 Score=130.17 Aligned_cols=103 Identities=11% Similarity=-0.043 Sum_probs=81.6
Q ss_pred ccCCCCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHhCCCcEEEEecCCCCCC-----CCCCeeEEEec
Q 039518 225 RSAGVFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALERGIGAMISALSTKQLPY-----PSSSFEMVHCS 299 (617)
Q Consensus 225 r~~~g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~erg~~~~~~~~d~~~Lpf-----~d~sFDlV~~s 299 (617)
.+.++.+|||||||+|.++..|++++. .++++|+|+.|++.|+++.... ....+...++. .+++||+|+++
T Consensus 42 ~l~~g~~VLDlGcGtG~~a~~La~~g~---~V~gvD~S~~ml~~Ar~~~~~~-~v~~~~~~~~~~~~~~~~~~fD~Vv~~ 117 (261)
T 3iv6_A 42 NIVPGSTVAVIGASTRFLIEKALERGA---SVTVFDFSQRMCDDLAEALADR-CVTIDLLDITAEIPKELAGHFDFVLND 117 (261)
T ss_dssp TCCTTCEEEEECTTCHHHHHHHHHTTC---EEEEEESCHHHHHHHHHHTSSS-CCEEEECCTTSCCCGGGTTCCSEEEEE
T ss_pred CCCCcCEEEEEeCcchHHHHHHHhcCC---EEEEEECCHHHHHHHHHHHHhc-cceeeeeecccccccccCCCccEEEEh
Confidence 345677899999999999999999875 6788899999999999885432 22333444433 25789999999
Q ss_pred ccccccc-cchHHHHHHHHHhccCCeEEEEEeCC
Q 039518 300 RCRVDWH-ANDGILLKEVDRVLRPNGYFVYSAPP 332 (617)
Q Consensus 300 ~~l~h~~-~d~~~~L~el~RvLrPGG~Liis~p~ 332 (617)
.+++|+. ++...++.++.++| |||.++++.+.
T Consensus 118 ~~l~~~~~~~~~~~l~~l~~lL-PGG~l~lS~~~ 150 (261)
T 3iv6_A 118 RLINRFTTEEARRACLGMLSLV-GSGTVRASVKL 150 (261)
T ss_dssp SCGGGSCHHHHHHHHHHHHHHH-TTSEEEEEEEB
T ss_pred hhhHhCCHHHHHHHHHHHHHhC-cCcEEEEEecc
Confidence 8888876 45677999999999 99999999753
No 84
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.32 E-value=7.3e-12 Score=119.77 Aligned_cols=122 Identities=15% Similarity=0.090 Sum_probs=91.5
Q ss_pred ChhHHHHHHHhhhhhccCCcccCCCCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHh----CC-CcEEE
Q 039518 205 GAPEYIQRLGNMMTNETGNLRSAGVFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALER----GI-GAMIS 279 (617)
Q Consensus 205 ~a~~Y~~~L~~~L~~~~~~lr~~~g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~er----g~-~~~~~ 279 (617)
..+...+.+.+.+..... .++.+|||+|||+|.++..+++++.. .++++|+++.+++.|+++ +. ++.+.
T Consensus 25 ~~~~~~~~l~~~l~~~~~----~~~~~vLDlgcG~G~~~~~~~~~~~~--~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~ 98 (189)
T 3p9n_A 25 TTDRVRESLFNIVTARRD----LTGLAVLDLYAGSGALGLEALSRGAA--SVLFVESDQRSAAVIARNIEALGLSGATLR 98 (189)
T ss_dssp -CHHHHHHHHHHHHHHSC----CTTCEEEEETCTTCHHHHHHHHTTCS--EEEEEECCHHHHHHHHHHHHHHTCSCEEEE
T ss_pred CcHHHHHHHHHHHHhccC----CCCCEEEEeCCCcCHHHHHHHHCCCC--eEEEEECCHHHHHHHHHHHHHcCCCceEEE
Confidence 344555555555543211 24567999999999999988887643 678899999999998875 43 57888
Q ss_pred EecCCCCC--CCCCCeeEEEecccccccccchHHHHHHHHH--hccCCeEEEEEeCC
Q 039518 280 ALSTKQLP--YPSSSFEMVHCSRCRVDWHANDGILLKEVDR--VLRPNGYFVYSAPP 332 (617)
Q Consensus 280 ~~d~~~Lp--f~d~sFDlV~~s~~l~h~~~d~~~~L~el~R--vLrPGG~Liis~p~ 332 (617)
.+|+.+++ +++++||+|+++...++..++...++.++.+ +|+|||.+++..+.
T Consensus 99 ~~d~~~~~~~~~~~~fD~i~~~~p~~~~~~~~~~~l~~~~~~~~L~pgG~l~~~~~~ 155 (189)
T 3p9n_A 99 RGAVAAVVAAGTTSPVDLVLADPPYNVDSADVDAILAALGTNGWTREGTVAVVERAT 155 (189)
T ss_dssp ESCHHHHHHHCCSSCCSEEEECCCTTSCHHHHHHHHHHHHHSSSCCTTCEEEEEEET
T ss_pred EccHHHHHhhccCCCccEEEECCCCCcchhhHHHHHHHHHhcCccCCCeEEEEEecC
Confidence 88876653 4578999999986554433568889999999 99999999998764
No 85
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.32 E-value=9.7e-12 Score=123.59 Aligned_cols=102 Identities=20% Similarity=0.284 Sum_probs=84.0
Q ss_pred CCCCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHh----CCCcEEEEecCCCCCCCCCCeeEEEecccc
Q 039518 227 AGVFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALER----GIGAMISALSTKQLPYPSSSFEMVHCSRCR 302 (617)
Q Consensus 227 ~~g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~er----g~~~~~~~~d~~~Lpf~d~sFDlV~~s~~l 302 (617)
.++.+|||+|||+|.++..|++++. .++++|+++.+++.|+++ +.++.+..+|+..++++ ++||+|+|....
T Consensus 40 ~~~~~vLDlGcG~G~~~~~l~~~~~---~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~-~~fD~v~~~~~~ 115 (252)
T 1wzn_A 40 REVRRVLDLACGTGIPTLELAERGY---EVVGLDLHEEMLRVARRKAKERNLKIEFLQGDVLEIAFK-NEFDAVTMFFST 115 (252)
T ss_dssp SCCCEEEEETCTTCHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHHHTTCCCEEEESCGGGCCCC-SCEEEEEECSSG
T ss_pred cCCCEEEEeCCCCCHHHHHHHHCCC---eEEEEECCHHHHHHHHHHHHhcCCceEEEECChhhcccC-CCccEEEEcCCc
Confidence 3566899999999999999998865 678889999999998865 55788999999888865 679999986444
Q ss_pred cccc--cchHHHHHHHHHhccCCeEEEEEeCC
Q 039518 303 VDWH--ANDGILLKEVDRVLRPNGYFVYSAPP 332 (617)
Q Consensus 303 ~h~~--~d~~~~L~el~RvLrPGG~Liis~p~ 332 (617)
+++. ++...++.++.++|+|||.+++..+.
T Consensus 116 ~~~~~~~~~~~~l~~~~~~L~pgG~li~~~~~ 147 (252)
T 1wzn_A 116 IMYFDEEDLRKLFSKVAEALKPGGVFITDFPC 147 (252)
T ss_dssp GGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred hhcCCHHHHHHHHHHHHHHcCCCeEEEEeccc
Confidence 4433 35678999999999999999998763
No 86
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=99.31 E-value=4.9e-12 Score=119.43 Aligned_cols=116 Identities=19% Similarity=0.117 Sum_probs=91.2
Q ss_pred cccCCCCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHhCC-CcEEEEecCCCCCC---CCCCeeEEEec
Q 039518 224 LRSAGVFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALERGI-GAMISALSTKQLPY---PSSSFEMVHCS 299 (617)
Q Consensus 224 lr~~~g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~erg~-~~~~~~~d~~~Lpf---~d~sFDlV~~s 299 (617)
+.+.+|.+|||||||. + .+|+++.|++.|+++.. ++.+..+|++++++ ++++||+|+|+
T Consensus 8 ~g~~~g~~vL~~~~g~----------------v-~vD~s~~ml~~a~~~~~~~~~~~~~d~~~~~~~~~~~~~fD~V~~~ 70 (176)
T 2ld4_A 8 FGISAGQFVAVVWDKS----------------S-PVEALKGLVDKLQALTGNEGRVSVENIKQLLQSAHKESSFDIILSG 70 (176)
T ss_dssp TTCCTTSEEEEEECTT----------------S-CHHHHHHHHHHHHHHTTTTSEEEEEEGGGGGGGCCCSSCEEEEEEC
T ss_pred cCCCCCCEEEEecCCc----------------e-eeeCCHHHHHHHHHhcccCcEEEEechhcCccccCCCCCEeEEEEC
Confidence 4567888999999996 1 26999999999998843 48888999988887 78999999999
Q ss_pred ccccccccchHHHHHHHHHhccCCeEEEEEeCCCCCCC-CCChhhHHHHHHHHHHcCc
Q 039518 300 RCRVDWHANDGILLKEVDRVLRPNGYFVYSAPPAYRKD-KDYPLIWDKLVNLTTAMCW 356 (617)
Q Consensus 300 ~~l~h~~~d~~~~L~el~RvLrPGG~Liis~p~~~~~~-~~~~~~W~~le~La~~~gw 356 (617)
.+++|+..++..++++++|+|||||+|++..|...... .......+++.+++++.||
T Consensus 71 ~~l~~~~~~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf 128 (176)
T 2ld4_A 71 LVPGSTTLHSAEILAEIARILRPGGCLFLKEPVETAVDNNSKVKTASKLCSALTLSGL 128 (176)
T ss_dssp CSTTCCCCCCHHHHHHHHHHEEEEEEEEEEEEEESSSCSSSSSCCHHHHHHHHHHTTC
T ss_pred ChhhhcccCHHHHHHHHHHHCCCCEEEEEEcccccccccccccCCHHHHHHHHHHCCC
Confidence 88877635889999999999999999999765322111 1111224668899999999
No 87
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=99.31 E-value=6.1e-12 Score=123.79 Aligned_cols=98 Identities=15% Similarity=0.229 Sum_probs=83.3
Q ss_pred CCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHh----CCCcEEEEecCCCCCCCCCCeeEEEecc-ccc
Q 039518 229 VFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALER----GIGAMISALSTKQLPYPSSSFEMVHCSR-CRV 303 (617)
Q Consensus 229 g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~er----g~~~~~~~~d~~~Lpf~d~sFDlV~~s~-~l~ 303 (617)
+.+|||+|||+|.++..+++. ..++++|+++.+++.|+++ +.++.+..+|+..++++ ++||+|++.. +++
T Consensus 34 ~~~vLdiG~G~G~~~~~l~~~----~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~-~~fD~v~~~~~~~~ 108 (243)
T 3d2l_A 34 GKRIADIGCGTGTATLLLADH----YEVTGVDLSEEMLEIAQEKAMETNRHVDFWVQDMRELELP-EPVDAITILCDSLN 108 (243)
T ss_dssp TCEEEEESCTTCHHHHHHTTT----SEEEEEESCHHHHHHHHHHHHHTTCCCEEEECCGGGCCCS-SCEEEEEECTTGGG
T ss_pred CCeEEEecCCCCHHHHHHhhC----CeEEEEECCHHHHHHHHHhhhhcCCceEEEEcChhhcCCC-CCcCEEEEeCCchh
Confidence 457999999999999999887 3788899999999999876 45688889998888876 7899999876 666
Q ss_pred ccc--cchHHHHHHHHHhccCCeEEEEEeC
Q 039518 304 DWH--ANDGILLKEVDRVLRPNGYFVYSAP 331 (617)
Q Consensus 304 h~~--~d~~~~L~el~RvLrPGG~Liis~p 331 (617)
|+. ++...+++++.++|+|||.+++..+
T Consensus 109 ~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 138 (243)
T 3d2l_A 109 YLQTEADVKQTFDSAARLLTDGGKLLFDVH 138 (243)
T ss_dssp GCCSHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred hcCCHHHHHHHHHHHHHhcCCCeEEEEEcC
Confidence 663 4567899999999999999999765
No 88
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.30 E-value=1.3e-11 Score=116.84 Aligned_cols=117 Identities=11% Similarity=0.015 Sum_probs=92.2
Q ss_pred CCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHhCCCcEEEEecCCCCCCCCCCeeEEEeccccccccc-
Q 039518 229 VFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALERGIGAMISALSTKQLPYPSSSFEMVHCSRCRVDWHA- 307 (617)
Q Consensus 229 g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~erg~~~~~~~~d~~~Lpf~d~sFDlV~~s~~l~h~~~- 307 (617)
+.+|||+|||+|.++..+++++ .++++|+++.+++. ..++.+..+|+.. ++++++||+|+++..+++..+
T Consensus 24 ~~~vLD~GcG~G~~~~~l~~~~----~v~gvD~s~~~~~~----~~~~~~~~~d~~~-~~~~~~fD~i~~n~~~~~~~~~ 94 (170)
T 3q87_B 24 MKIVLDLGTSTGVITEQLRKRN----TVVSTDLNIRALES----HRGGNLVRADLLC-SINQESVDVVVFNPPYVPDTDD 94 (170)
T ss_dssp SCEEEEETCTTCHHHHHHTTTS----EEEEEESCHHHHHT----CSSSCEEECSTTT-TBCGGGCSEEEECCCCBTTCCC
T ss_pred CCeEEEeccCccHHHHHHHhcC----cEEEEECCHHHHhc----ccCCeEEECChhh-hcccCCCCEEEECCCCccCCcc
Confidence 4579999999999999999887 67888999999887 4457888888876 667789999999876554332
Q ss_pred -------chHHHHHHHHHhccCCeEEEEEeCCCCCCCCCChhhHHHHHHHHHHcCceEEEEee
Q 039518 308 -------NDGILLKEVDRVLRPNGYFVYSAPPAYRKDKDYPLIWDKLVNLTTAMCWKLIARKI 363 (617)
Q Consensus 308 -------d~~~~L~el~RvLrPGG~Liis~p~~~~~~~~~~~~W~~le~La~~~gw~~v~~~~ 363 (617)
+...++.++.+.| |||.+++..+.. ..-+.+.+++++.||+.+....
T Consensus 95 ~~~~~~~~~~~~~~~~~~~l-pgG~l~~~~~~~--------~~~~~l~~~l~~~gf~~~~~~~ 148 (170)
T 3q87_B 95 PIIGGGYLGREVIDRFVDAV-TVGMLYLLVIEA--------NRPKEVLARLEERGYGTRILKV 148 (170)
T ss_dssp TTTBCCGGGCHHHHHHHHHC-CSSEEEEEEEGG--------GCHHHHHHHHHHTTCEEEEEEE
T ss_pred ccccCCcchHHHHHHHHhhC-CCCEEEEEEecC--------CCHHHHHHHHHHCCCcEEEEEe
Confidence 2357889999999 999999987421 1145688889999999876543
No 89
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=99.29 E-value=1.8e-11 Score=127.07 Aligned_cols=132 Identities=13% Similarity=0.120 Sum_probs=100.4
Q ss_pred CCCCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHh----CC--CcEEEEecCCCCCCCCCCeeEEEecc
Q 039518 227 AGVFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALER----GI--GAMISALSTKQLPYPSSSFEMVHCSR 300 (617)
Q Consensus 227 ~~g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~er----g~--~~~~~~~d~~~Lpf~d~sFDlV~~s~ 300 (617)
.++.+|||||||+|.++..++++... ..++++|++ .+++.|+++ +. .+.+..+|+...+++++ ||+|++++
T Consensus 164 ~~~~~vlDvG~G~G~~~~~l~~~~p~-~~~~~~D~~-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~-~D~v~~~~ 240 (335)
T 2r3s_A 164 IEPLKVLDISASHGLFGIAVAQHNPN-AEIFGVDWA-SVLEVAKENARIQGVASRYHTIAGSAFEVDYGND-YDLVLLPN 240 (335)
T ss_dssp CCCSEEEEETCTTCHHHHHHHHHCTT-CEEEEEECH-HHHHHHHHHHHHHTCGGGEEEEESCTTTSCCCSC-EEEEEEES
T ss_pred CCCCEEEEECCCcCHHHHHHHHHCCC-CeEEEEecH-HHHHHHHHHHHhcCCCcceEEEecccccCCCCCC-CcEEEEcc
Confidence 34567999999999999999887432 278888999 999988875 33 37888889887777665 99999999
Q ss_pred cccccc-cchHHHHHHHHHhccCCeEEEEEeCCCCCCCC------------------CChhhHHHHHHHHHHcCceEEEE
Q 039518 301 CRVDWH-ANDGILLKEVDRVLRPNGYFVYSAPPAYRKDK------------------DYPLIWDKLVNLTTAMCWKLIAR 361 (617)
Q Consensus 301 ~l~h~~-~d~~~~L~el~RvLrPGG~Liis~p~~~~~~~------------------~~~~~W~~le~La~~~gw~~v~~ 361 (617)
+++++. ++...+|+++.++|+|||++++.++....... .....-+++.+++++.||+.+..
T Consensus 241 ~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~ll~~aGf~~~~~ 320 (335)
T 2r3s_A 241 FLHHFDVATCEQLLRKIKTALAVEGKVIVFDFIPNSDRITPPDAAAFSLVMLATTPNGDAYTFAEYESMFSNAGFSHSQL 320 (335)
T ss_dssp CGGGSCHHHHHHHHHHHHHHEEEEEEEEEEECCCCTTSSCSHHHHHHHHHHHHHSSSCCCCCHHHHHHHHHHTTCSEEEE
T ss_pred hhccCCHHHHHHHHHHHHHhCCCCcEEEEEeecCCCCcCCchHHHHHHHHHHeeCCCCCcCCHHHHHHHHHHCCCCeeeE
Confidence 988886 23478999999999999999998764322110 00111345788899999988764
No 90
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.29 E-value=2e-11 Score=119.83 Aligned_cols=123 Identities=11% Similarity=0.156 Sum_probs=92.3
Q ss_pred CCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHh----CC-CcEEEEecCCCCC--CCCCCeeEEEeccc
Q 039518 229 VFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALER----GI-GAMISALSTKQLP--YPSSSFEMVHCSRC 301 (617)
Q Consensus 229 g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~er----g~-~~~~~~~d~~~Lp--f~d~sFDlV~~s~~ 301 (617)
+.+|||||||+|.++..|++.... ..+.++|+++.+++.|+++ +. ++.+..+|+..++ +++++||.|++...
T Consensus 39 ~~~vLDiGcG~G~~~~~la~~~p~-~~v~giD~s~~~l~~a~~~~~~~~~~nv~~~~~d~~~l~~~~~~~~~d~v~~~~~ 117 (213)
T 2fca_A 39 NPIHIEVGTGKGQFISGMAKQNPD-INYIGIELFKSVIVTAVQKVKDSEAQNVKLLNIDADTLTDVFEPGEVKRVYLNFS 117 (213)
T ss_dssp CCEEEEECCTTSHHHHHHHHHCTT-SEEEEECSCHHHHHHHHHHHHHSCCSSEEEECCCGGGHHHHCCTTSCCEEEEESC
T ss_pred CceEEEEecCCCHHHHHHHHHCCC-CCEEEEEechHHHHHHHHHHHHcCCCCEEEEeCCHHHHHhhcCcCCcCEEEEECC
Confidence 446999999999999999887432 2788899999999998875 44 5788888887776 77889999987542
Q ss_pred ccccccc--------hHHHHHHHHHhccCCeEEEEEeCCCCCCCCCChhhHHHHHHHHHHcCceEEEE
Q 039518 302 RVDWHAN--------DGILLKEVDRVLRPNGYFVYSAPPAYRKDKDYPLIWDKLVNLTTAMCWKLIAR 361 (617)
Q Consensus 302 l~h~~~d--------~~~~L~el~RvLrPGG~Liis~p~~~~~~~~~~~~W~~le~La~~~gw~~v~~ 361 (617)
.+|... ...++.++.++|+|||.|++.+.. ....+.+...++..||.....
T Consensus 118 -~p~~~~~~~~~rl~~~~~l~~~~~~LkpgG~l~~~td~--------~~~~~~~~~~~~~~g~~~~~~ 176 (213)
T 2fca_A 118 -DPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFKTDN--------RGLFEYSLKSFSEYGLLLTYV 176 (213)
T ss_dssp -CCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEEESC--------HHHHHHHHHHHHHHTCEEEEE
T ss_pred -CCCcCccccccccCcHHHHHHHHHHcCCCCEEEEEeCC--------HHHHHHHHHHHHHCCCccccc
Confidence 233311 367899999999999999998731 112344666677778876653
No 91
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.29 E-value=2e-11 Score=122.58 Aligned_cols=135 Identities=7% Similarity=0.003 Sum_probs=97.7
Q ss_pred CCcccCCCCeEEEECCCCcHHHHHhccC-CCcEEEeeecCCcHHHHHHHHHhC---CCcEEEEecC---CCCCCCCCCee
Q 039518 222 GNLRSAGVFQVLDVGCGVASFSAFLLPL-DIQTMSFAPKDGHENQIQFALERG---IGAMISALST---KQLPYPSSSFE 294 (617)
Q Consensus 222 ~~lr~~~g~rVLDIGCGtG~~a~~La~~-gv~~v~v~~iDis~~~lq~A~erg---~~~~~~~~d~---~~Lpf~d~sFD 294 (617)
..+.++||.+|||+|||+|.++..|++. |... .+.++|+++.+++.++++. .++....++. ...++..+++|
T Consensus 71 ~~l~ikpG~~VldlG~G~G~~~~~la~~VG~~G-~V~avD~s~~~~~~l~~~a~~~~ni~~V~~d~~~p~~~~~~~~~vD 149 (233)
T 4df3_A 71 IELPVKEGDRILYLGIASGTTASHMSDIIGPRG-RIYGVEFAPRVMRDLLTVVRDRRNIFPILGDARFPEKYRHLVEGVD 149 (233)
T ss_dssp SCCCCCTTCEEEEETCTTSHHHHHHHHHHCTTC-EEEEEECCHHHHHHHHHHSTTCTTEEEEESCTTCGGGGTTTCCCEE
T ss_pred hhcCCCCCCEEEEecCcCCHHHHHHHHHhCCCc-eEEEEeCCHHHHHHHHHhhHhhcCeeEEEEeccCccccccccceEE
Confidence 4578899999999999999999999986 4443 6788899999999888763 2455566554 33456778999
Q ss_pred EEEecccccccccchHHHHHHHHHhccCCeEEEEEeCCCC--CCCCCChhhHHHHHHHHHHcCceEEEE
Q 039518 295 MVHCSRCRVDWHANDGILLKEVDRVLRPNGYFVYSAPPAY--RKDKDYPLIWDKLVNLTTAMCWKLIAR 361 (617)
Q Consensus 295 lV~~s~~l~h~~~d~~~~L~el~RvLrPGG~Liis~p~~~--~~~~~~~~~W~~le~La~~~gw~~v~~ 361 (617)
+|++.. +.+.+...++.++.++|||||+++++..... ...+.. ....+..+.++..||+.+..
T Consensus 150 vVf~d~---~~~~~~~~~l~~~~r~LKpGG~lvI~ik~r~~d~~~p~~-~~~~~ev~~L~~~GF~l~e~ 214 (233)
T 4df3_A 150 GLYADV---AQPEQAAIVVRNARFFLRDGGYMLMAIKARSIDVTTEPS-EVYKREIKTLMDGGLEIKDV 214 (233)
T ss_dssp EEEECC---CCTTHHHHHHHHHHHHEEEEEEEEEEEECCHHHHHTCCC-HHHHHHHHHHHHTTCCEEEE
T ss_pred EEEEec---cCChhHHHHHHHHHHhccCCCEEEEEEecccCCCCCChH-HHHHHHHHHHHHCCCEEEEE
Confidence 998642 3345678899999999999999999753111 011111 12344555667889998764
No 92
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=99.29 E-value=2.7e-11 Score=139.44 Aligned_cols=104 Identities=16% Similarity=0.187 Sum_probs=88.1
Q ss_pred CCCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHh----------C-CCcEEEEecCCCCCCCCCCeeEE
Q 039518 228 GVFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALER----------G-IGAMISALSTKQLPYPSSSFEMV 296 (617)
Q Consensus 228 ~g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~er----------g-~~~~~~~~d~~~Lpf~d~sFDlV 296 (617)
++.+|||||||+|.++..|++++.....++++|+++.+++.|+++ + .++.+.++|+..+++++++||+|
T Consensus 721 ~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~nVefiqGDa~dLp~~d~sFDlV 800 (950)
T 3htx_A 721 SASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNVKSATLYDGSILEFDSRLHDVDIG 800 (950)
T ss_dssp CCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCSEEEEEESCTTSCCTTSCSCCEE
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCCCceEEEECchHhCCcccCCeeEE
Confidence 456799999999999999999873333788999999999999872 2 35889999999999999999999
Q ss_pred EecccccccccchH--HHHHHHHHhccCCeEEEEEeCCC
Q 039518 297 HCSRCRVDWHANDG--ILLKEVDRVLRPNGYFVYSAPPA 333 (617)
Q Consensus 297 ~~s~~l~h~~~d~~--~~L~el~RvLrPGG~Liis~p~~ 333 (617)
+|..+++|+. ++. .++.++.|+|||| .+++++|+.
T Consensus 801 V~~eVLeHL~-dp~l~~~L~eI~RvLKPG-~LIISTPN~ 837 (950)
T 3htx_A 801 TCLEVIEHME-EDQACEFGEKVLSLFHPK-LLIVSTPNY 837 (950)
T ss_dssp EEESCGGGSC-HHHHHHHHHHHHHTTCCS-EEEEEECBG
T ss_pred EEeCchhhCC-hHHHHHHHHHHHHHcCCC-EEEEEecCc
Confidence 9999888877 333 5899999999999 888888753
No 93
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.28 E-value=3.4e-11 Score=112.79 Aligned_cols=119 Identities=12% Similarity=0.024 Sum_probs=89.1
Q ss_pred CCCCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHh----CCC--cEEEEecC-CCCCCCCCCeeEEEec
Q 039518 227 AGVFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALER----GIG--AMISALST-KQLPYPSSSFEMVHCS 299 (617)
Q Consensus 227 ~~g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~er----g~~--~~~~~~d~-~~Lpf~d~sFDlV~~s 299 (617)
.++.+|||+|||+|.++..+++... ...++++|+++.+++.|+++ +.+ + +...+. +.++..+++||+|+++
T Consensus 24 ~~~~~vldiG~G~G~~~~~l~~~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~-~~~~d~~~~~~~~~~~~D~i~~~ 101 (178)
T 3hm2_A 24 KPHETLWDIGGGSGSIAIEWLRSTP-QTTAVCFEISEERRERILSNAINLGVSDRI-AVQQGAPRAFDDVPDNPDVIFIG 101 (178)
T ss_dssp CTTEEEEEESTTTTHHHHHHHTTSS-SEEEEEECSCHHHHHHHHHHHHTTTCTTSE-EEECCTTGGGGGCCSCCSEEEEC
T ss_pred cCCCeEEEeCCCCCHHHHHHHHHCC-CCeEEEEeCCHHHHHHHHHHHHHhCCCCCE-EEecchHhhhhccCCCCCEEEEC
Confidence 4567899999999999999988742 24788999999999999876 443 4 555665 3344333889999998
Q ss_pred ccccccccchHHHHHHHHHhccCCeEEEEEeCCCCCCCCCChhhHHHHHHHHHHcCceEEE
Q 039518 300 RCRVDWHANDGILLKEVDRVLRPNGYFVYSAPPAYRKDKDYPLIWDKLVNLTTAMCWKLIA 360 (617)
Q Consensus 300 ~~l~h~~~d~~~~L~el~RvLrPGG~Liis~p~~~~~~~~~~~~W~~le~La~~~gw~~v~ 360 (617)
.++++ ..+++++.++|+|||.+++..... .....+..+.+..+++...
T Consensus 102 ~~~~~-----~~~l~~~~~~L~~gG~l~~~~~~~--------~~~~~~~~~~~~~~~~~~~ 149 (178)
T 3hm2_A 102 GGLTA-----PGVFAAAWKRLPVGGRLVANAVTV--------ESEQMLWALRKQFGGTISS 149 (178)
T ss_dssp C-TTC-----TTHHHHHHHTCCTTCEEEEEECSH--------HHHHHHHHHHHHHCCEEEE
T ss_pred CcccH-----HHHHHHHHHhcCCCCEEEEEeecc--------ccHHHHHHHHHHcCCeeEE
Confidence 76654 568999999999999999987421 1244577777888876654
No 94
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.28 E-value=4.4e-12 Score=121.60 Aligned_cols=104 Identities=14% Similarity=0.106 Sum_probs=81.8
Q ss_pred CCCCeEEEECCCCcHHHHHhccC-CCcEEEeeecCCcHHHHHHHHHh----CC--CcEEEEecCCCCC-CCCCCeeEEEe
Q 039518 227 AGVFQVLDVGCGVASFSAFLLPL-DIQTMSFAPKDGHENQIQFALER----GI--GAMISALSTKQLP-YPSSSFEMVHC 298 (617)
Q Consensus 227 ~~g~rVLDIGCGtG~~a~~La~~-gv~~v~v~~iDis~~~lq~A~er----g~--~~~~~~~d~~~Lp-f~d~sFDlV~~ 298 (617)
.++.+|||+|||+|.++..++++ +... .++++|+++.+++.|+++ +. ++.+..+|+..++ +.+++||+|++
T Consensus 21 ~~~~~vLDlGcG~G~~~~~l~~~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~ 99 (197)
T 3eey_A 21 KEGDTVVDATCGNGNDTAFLASLVGENG-RVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQNMDKYIDCPVKAVMF 99 (197)
T ss_dssp CTTCEEEESCCTTSHHHHHHHHHHCTTC-EEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCGGGGGGTCCSCEEEEEE
T ss_pred CCCCEEEEcCCCCCHHHHHHHHHhCCCC-EEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHhhhccCCceEEEE
Confidence 45667999999999999999886 2222 788899999999999876 33 5788888887776 66789999998
Q ss_pred ccccccc--------ccchHHHHHHHHHhccCCeEEEEEeC
Q 039518 299 SRCRVDW--------HANDGILLKEVDRVLRPNGYFVYSAP 331 (617)
Q Consensus 299 s~~l~h~--------~~d~~~~L~el~RvLrPGG~Liis~p 331 (617)
+..+... ..+...++.++.++|||||++++...
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~~ 140 (197)
T 3eey_A 100 NLGYLPSGDHSISTRPETTIQALSKAMELLVTGGIITVVIY 140 (197)
T ss_dssp EESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred cCCcccCcccccccCcccHHHHHHHHHHhCcCCCEEEEEEc
Confidence 7544221 12345799999999999999999874
No 95
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=99.28 E-value=7.6e-12 Score=121.99 Aligned_cols=133 Identities=16% Similarity=0.106 Sum_probs=93.6
Q ss_pred CCCCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHH----HH----hCC-CcEEEEecCCCCCCCCCCeeEEE
Q 039518 227 AGVFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFA----LE----RGI-GAMISALSTKQLPYPSSSFEMVH 297 (617)
Q Consensus 227 ~~g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A----~e----rg~-~~~~~~~d~~~Lpf~d~sFDlV~ 297 (617)
.++.+|||||||+|.++..|+++... ..++++|+++.+++.+ ++ .+. ++.+..+|+.++|+++++ |.|+
T Consensus 26 ~~~~~vLDiGcG~G~~~~~la~~~p~-~~v~gvD~s~~~l~~~~~~a~~~~~~~~~~~v~~~~~d~~~l~~~~~~-d~v~ 103 (218)
T 3mq2_A 26 QYDDVVLDVGTGDGKHPYKVARQNPS-RLVVALDADKSRMEKISAKAAAKPAKGGLPNLLYLWATAERLPPLSGV-GELH 103 (218)
T ss_dssp TSSEEEEEESCTTCHHHHHHHHHCTT-EEEEEEESCGGGGHHHHHHHTSCGGGTCCTTEEEEECCSTTCCSCCCE-EEEE
T ss_pred cCCCEEEEecCCCCHHHHHHHHHCCC-CEEEEEECCHHHHHHHHHHHHHhhhhcCCCceEEEecchhhCCCCCCC-CEEE
Confidence 35567999999999999999987432 3788999999977753 21 233 578899999999998777 7776
Q ss_pred eccc---cc-ccccchHHHHHHHHHhccCCeEEEEEeCCCCCCC--------CCCh-hh-HHHHHHHHHHcCceEEEE
Q 039518 298 CSRC---RV-DWHANDGILLKEVDRVLRPNGYFVYSAPPAYRKD--------KDYP-LI-WDKLVNLTTAMCWKLIAR 361 (617)
Q Consensus 298 ~s~~---l~-h~~~d~~~~L~el~RvLrPGG~Liis~p~~~~~~--------~~~~-~~-W~~le~La~~~gw~~v~~ 361 (617)
.... .+ |+..++..+++++.|+|||||.++++.....+.. +... .. -+.+..++++.||++...
T Consensus 104 ~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~i~~~ 181 (218)
T 3mq2_A 104 VLMPWGSLLRGVLGSSPEMLRGMAAVCRPGASFLVALNLHAWRPSVPEVGEHPEPTPDSADEWLAPRYAEAGWKLADC 181 (218)
T ss_dssp EESCCHHHHHHHHTSSSHHHHHHHHTEEEEEEEEEEEEGGGBTTBCGGGTTCCCCCHHHHHHHHHHHHHHTTEEEEEE
T ss_pred EEccchhhhhhhhccHHHHHHHHHHHcCCCcEEEEEeccccccccccccccCCccchHHHHHHHHHHHHHcCCCceee
Confidence 3321 11 1334668899999999999999999753222211 1111 11 123788899999998764
No 96
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=99.28 E-value=3.3e-12 Score=126.63 Aligned_cols=102 Identities=11% Similarity=0.060 Sum_probs=84.2
Q ss_pred CCCCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHhCC--CcEEEEecCCCCCCCC-----CCeeEEEec
Q 039518 227 AGVFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALERGI--GAMISALSTKQLPYPS-----SSFEMVHCS 299 (617)
Q Consensus 227 ~~g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~erg~--~~~~~~~d~~~Lpf~d-----~sFDlV~~s 299 (617)
.++.+|||||||+|.++..|++.+. .++++|+++.+++.|+++.. ++.+..+|+.++++.. ..||+|+++
T Consensus 55 ~~~~~vLD~GcG~G~~~~~la~~~~---~v~gvD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~v~~~ 131 (245)
T 3ggd_A 55 NPELPLIDFACGNGTQTKFLSQFFP---RVIGLDVSKSALEIAAKENTAANISYRLLDGLVPEQAAQIHSEIGDANIYMR 131 (245)
T ss_dssp CTTSCEEEETCTTSHHHHHHHHHSS---CEEEEESCHHHHHHHHHHSCCTTEEEEECCTTCHHHHHHHHHHHCSCEEEEE
T ss_pred CCCCeEEEEcCCCCHHHHHHHHhCC---CEEEEECCHHHHHHHHHhCcccCceEEECcccccccccccccccCccEEEEc
Confidence 4566799999999999999998876 57788999999999998743 5788888887765432 349999999
Q ss_pred ccccccc-cchHHHHHHHHHhccCCeEEEEEeC
Q 039518 300 RCRVDWH-ANDGILLKEVDRVLRPNGYFVYSAP 331 (617)
Q Consensus 300 ~~l~h~~-~d~~~~L~el~RvLrPGG~Liis~p 331 (617)
.++++.. ++...+++++.++|||||++++.+.
T Consensus 132 ~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 164 (245)
T 3ggd_A 132 TGFHHIPVEKRELLGQSLRILLGKQGAMYLIEL 164 (245)
T ss_dssp SSSTTSCGGGHHHHHHHHHHHHTTTCEEEEEEE
T ss_pred chhhcCCHHHHHHHHHHHHHHcCCCCEEEEEeC
Confidence 8776665 2578999999999999999988864
No 97
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.27 E-value=2.4e-12 Score=138.20 Aligned_cols=102 Identities=15% Similarity=0.140 Sum_probs=86.2
Q ss_pred CCCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHh----CCCcEEEEecCCCCCCCCCCeeEEEeccccc
Q 039518 228 GVFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALER----GIGAMISALSTKQLPYPSSSFEMVHCSRCRV 303 (617)
Q Consensus 228 ~g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~er----g~~~~~~~~d~~~Lpf~d~sFDlV~~s~~l~ 303 (617)
++.+|||+|||+|.++..+++++. .++++|+++.+++.|+++ +..+.+...|+...+.++++||+|+++..++
T Consensus 233 ~~~~VLDlGcG~G~~~~~la~~g~---~V~gvDis~~al~~A~~n~~~~~~~v~~~~~D~~~~~~~~~~fD~Ii~npp~~ 309 (381)
T 3dmg_A 233 RGRQVLDLGAGYGALTLPLARMGA---EVVGVEDDLASVLSLQKGLEANALKAQALHSDVDEALTEEARFDIIVTNPPFH 309 (381)
T ss_dssp TTCEEEEETCTTSTTHHHHHHTTC---EEEEEESBHHHHHHHHHHHHHTTCCCEEEECSTTTTSCTTCCEEEEEECCCCC
T ss_pred CCCEEEEEeeeCCHHHHHHHHcCC---EEEEEECCHHHHHHHHHHHHHcCCCeEEEEcchhhccccCCCeEEEEECCchh
Confidence 456799999999999999999864 678889999999998875 5568899999988877778999999987665
Q ss_pred cc----ccchHHHHHHHHHhccCCeEEEEEeCC
Q 039518 304 DW----HANDGILLKEVDRVLRPNGYFVYSAPP 332 (617)
Q Consensus 304 h~----~~d~~~~L~el~RvLrPGG~Liis~p~ 332 (617)
+. ..+...++.++.++|+|||.++++.+.
T Consensus 310 ~~~~~~~~~~~~~l~~~~~~LkpGG~l~iv~n~ 342 (381)
T 3dmg_A 310 VGGAVILDVAQAFVNVAAARLRPGGVFFLVSNP 342 (381)
T ss_dssp TTCSSCCHHHHHHHHHHHHHEEEEEEEEEEECT
T ss_pred hcccccHHHHHHHHHHHHHhcCcCcEEEEEEcC
Confidence 41 235678999999999999999998754
No 98
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.27 E-value=5.2e-11 Score=116.25 Aligned_cols=118 Identities=14% Similarity=-0.006 Sum_probs=91.2
Q ss_pred CCCCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHh----CC--CcEEEEecCCCCCCCCCCeeEEEecc
Q 039518 227 AGVFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALER----GI--GAMISALSTKQLPYPSSSFEMVHCSR 300 (617)
Q Consensus 227 ~~g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~er----g~--~~~~~~~d~~~Lpf~d~sFDlV~~s~ 300 (617)
.++.+|||+|||+|.++..+++++. .++++|+++.+++.|+++ +. ++.+..+|+.+......+||+|++..
T Consensus 54 ~~~~~vLDlGcG~G~~~~~la~~~~---~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~~D~v~~~~ 130 (204)
T 3njr_A 54 RRGELLWDIGGGSGSVSVEWCLAGG---RAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPAALADLPLPEAVFIGG 130 (204)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTGGGTTSCCCSEEEECS
T ss_pred CCCCEEEEecCCCCHHHHHHHHcCC---EEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhhhcccCCCCCEEEECC
Confidence 4566799999999999999998843 678889999999998876 44 47888888876322345799999765
Q ss_pred cccccccchHHHHHHHHHhccCCeEEEEEeCCCCCCCCCChhhHHHHHHHHHHcCceEEEE
Q 039518 301 CRVDWHANDGILLKEVDRVLRPNGYFVYSAPPAYRKDKDYPLIWDKLVNLTTAMCWKLIAR 361 (617)
Q Consensus 301 ~l~h~~~d~~~~L~el~RvLrPGG~Liis~p~~~~~~~~~~~~W~~le~La~~~gw~~v~~ 361 (617)
.+ +.. ++.++.++|||||.++++... ......+.+.+++.|+++...
T Consensus 131 ~~-----~~~-~l~~~~~~LkpgG~lv~~~~~--------~~~~~~~~~~l~~~g~~i~~i 177 (204)
T 3njr_A 131 GG-----SQA-LYDRLWEWLAPGTRIVANAVT--------LESETLLTQLHARHGGQLLRI 177 (204)
T ss_dssp CC-----CHH-HHHHHHHHSCTTCEEEEEECS--------HHHHHHHHHHHHHHCSEEEEE
T ss_pred cc-----cHH-HHHHHHHhcCCCcEEEEEecC--------cccHHHHHHHHHhCCCcEEEE
Confidence 22 456 999999999999999998752 122455777788888776653
No 99
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.27 E-value=2.4e-11 Score=114.60 Aligned_cols=100 Identities=15% Similarity=0.110 Sum_probs=82.0
Q ss_pred CCCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHh----CCC---cEEEEecCCCCCCCCCCeeEEEecc
Q 039518 228 GVFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALER----GIG---AMISALSTKQLPYPSSSFEMVHCSR 300 (617)
Q Consensus 228 ~g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~er----g~~---~~~~~~d~~~Lpf~d~sFDlV~~s~ 300 (617)
++.+|||+|||+|.++..+++.+. .+.++|+++.+++.|+++ +.+ +.+...|+.. ++++++||+|+++.
T Consensus 52 ~~~~vLdiG~G~G~~~~~~~~~~~---~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~D~v~~~~ 127 (194)
T 1dus_A 52 KDDDILDLGCGYGVIGIALADEVK---STTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYE-NVKDRKYNKIITNP 127 (194)
T ss_dssp TTCEEEEETCTTSHHHHHHGGGSS---EEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTT-TCTTSCEEEEEECC
T ss_pred CCCeEEEeCCCCCHHHHHHHHcCC---eEEEEECCHHHHHHHHHHHHHcCCCccceEEEECchhc-ccccCCceEEEECC
Confidence 566799999999999999998833 678889999999998876 443 7788888766 34577899999987
Q ss_pred cccccccchHHHHHHHHHhccCCeEEEEEeC
Q 039518 301 CRVDWHANDGILLKEVDRVLRPNGYFVYSAP 331 (617)
Q Consensus 301 ~l~h~~~d~~~~L~el~RvLrPGG~Liis~p 331 (617)
.+++...+...+++++.++|+|||.+++..+
T Consensus 128 ~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 158 (194)
T 1dus_A 128 PIRAGKEVLHRIIEEGKELLKDNGEIWVVIQ 158 (194)
T ss_dssp CSTTCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CcccchhHHHHHHHHHHHHcCCCCEEEEEEC
Confidence 5544334677899999999999999999886
No 100
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.27 E-value=1.6e-11 Score=120.64 Aligned_cols=102 Identities=13% Similarity=0.089 Sum_probs=75.0
Q ss_pred cccCCCCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHH----HHHHhCCCcEEEEecCCC----CCCCCCCeeE
Q 039518 224 LRSAGVFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQ----FALERGIGAMISALSTKQ----LPYPSSSFEM 295 (617)
Q Consensus 224 lr~~~g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq----~A~erg~~~~~~~~d~~~----Lpf~d~sFDl 295 (617)
+.+.++.+|||+|||+|.++..|++.... ..++++|+++.+++ .|+++ .++.+..+|+.. .+++ ++||+
T Consensus 53 ~~~~~g~~VLDlGcGtG~~~~~la~~~~~-~~V~gvD~s~~~l~~~~~~a~~~-~~v~~~~~d~~~~~~~~~~~-~~fD~ 129 (210)
T 1nt2_A 53 LKLRGDERVLYLGAASGTTVSHLADIVDE-GIIYAVEYSAKPFEKLLELVRER-NNIIPLLFDASKPWKYSGIV-EKVDL 129 (210)
T ss_dssp CCCCSSCEEEEETCTTSHHHHHHHHHTTT-SEEEEECCCHHHHHHHHHHHHHC-SSEEEECSCTTCGGGTTTTC-CCEEE
T ss_pred cCCCCCCEEEEECCcCCHHHHHHHHHcCC-CEEEEEECCHHHHHHHHHHHhcC-CCeEEEEcCCCCchhhcccc-cceeE
Confidence 44567889999999999999999876422 27889999997653 34433 356666777755 3444 78999
Q ss_pred EEecccccccccchHHHHHHHHHhccCCeEEEEEeC
Q 039518 296 VHCSRCRVDWHANDGILLKEVDRVLRPNGYFVYSAP 331 (617)
Q Consensus 296 V~~s~~l~h~~~d~~~~L~el~RvLrPGG~Liis~p 331 (617)
|+++. .. ..+...++.++.|+|||||.|+++.+
T Consensus 130 V~~~~-~~--~~~~~~~l~~~~r~LkpgG~l~i~~~ 162 (210)
T 1nt2_A 130 IYQDI-AQ--KNQIEILKANAEFFLKEKGEVVIMVK 162 (210)
T ss_dssp EEECC-CS--TTHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EEEec-cC--hhHHHHHHHHHHHHhCCCCEEEEEEe
Confidence 99872 22 22345569999999999999999853
No 101
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=99.27 E-value=1.7e-11 Score=130.03 Aligned_cols=132 Identities=11% Similarity=0.094 Sum_probs=99.1
Q ss_pred CCCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHh----CC--CcEEEEecCCCC--CCCCCCeeEEEec
Q 039518 228 GVFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALER----GI--GAMISALSTKQL--PYPSSSFEMVHCS 299 (617)
Q Consensus 228 ~g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~er----g~--~~~~~~~d~~~L--pf~d~sFDlV~~s 299 (617)
+..+|||||||+|.++..++++.... .++++|+ +.+++.|+++ +. ++.+..+|+... |++ ++||+|+++
T Consensus 179 ~~~~vlDvG~G~G~~~~~l~~~~p~~-~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~p-~~~D~v~~~ 255 (363)
T 3dp7_A 179 HPKRLLDIGGNTGKWATQCVQYNKEV-EVTIVDL-PQQLEMMRKQTAGLSGSERIHGHGANLLDRDVPFP-TGFDAVWMS 255 (363)
T ss_dssp CCSEEEEESCTTCHHHHHHHHHSTTC-EEEEEEC-HHHHHHHHHHHTTCTTGGGEEEEECCCCSSSCCCC-CCCSEEEEE
T ss_pred CCCEEEEeCCCcCHHHHHHHHhCCCC-EEEEEeC-HHHHHHHHHHHHhcCcccceEEEEccccccCCCCC-CCcCEEEEe
Confidence 34579999999999999999865433 6788898 8999999876 32 478888888765 566 789999999
Q ss_pred cccccccc-chHHHHHHHHHhccCCeEEEEEeCCCCCCCCC---------------------ChhhHHHHHHHHHHcCce
Q 039518 300 RCRVDWHA-NDGILLKEVDRVLRPNGYFVYSAPPAYRKDKD---------------------YPLIWDKLVNLTTAMCWK 357 (617)
Q Consensus 300 ~~l~h~~~-d~~~~L~el~RvLrPGG~Liis~p~~~~~~~~---------------------~~~~W~~le~La~~~gw~ 357 (617)
.++++|.+ +...+|+++.++|+|||++++.++........ .....+++.++++++||+
T Consensus 256 ~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~AGf~ 335 (363)
T 3dp7_A 256 QFLDCFSEEEVISILTRVAQSIGKDSKVYIMETLWDRQRYETASYCLTQISLYFTAMANGNSKMFHSDDLIRCIENAGLE 335 (363)
T ss_dssp SCSTTSCHHHHHHHHHHHHHHCCTTCEEEEEECCTTSCSSHHHHHHHHHHHHHHHHSSCSSCCSCCHHHHHHHHHTTTEE
T ss_pred chhhhCCHHHHHHHHHHHHHhcCCCcEEEEEeeccCCccccchhhHHHHhhhhHHhhhCCCCcccCHHHHHHHHHHcCCe
Confidence 99988873 23578999999999999999987533221110 011244578888888988
Q ss_pred EEEEe
Q 039518 358 LIARK 362 (617)
Q Consensus 358 ~v~~~ 362 (617)
.+...
T Consensus 336 ~v~~~ 340 (363)
T 3dp7_A 336 VEEIQ 340 (363)
T ss_dssp ESCCC
T ss_pred EEEEE
Confidence 77643
No 102
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=99.27 E-value=6.5e-11 Score=123.42 Aligned_cols=134 Identities=19% Similarity=0.100 Sum_probs=99.8
Q ss_pred cccCCCCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHh----C--CCcEEEEecCCCCCCCCCCeeEEE
Q 039518 224 LRSAGVFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALER----G--IGAMISALSTKQLPYPSSSFEMVH 297 (617)
Q Consensus 224 lr~~~g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~er----g--~~~~~~~~d~~~Lpf~d~sFDlV~ 297 (617)
+...++.+|||||||+|.++..++++.... .++++|+ +.+++.|+++ + ..+.+..+|+. .+++. +||+|+
T Consensus 165 ~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~-~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~-~~~p~-~~D~v~ 240 (332)
T 3i53_A 165 YDWAALGHVVDVGGGSGGLLSALLTAHEDL-SGTVLDL-QGPASAAHRRFLDTGLSGRAQVVVGSFF-DPLPA-GAGGYV 240 (332)
T ss_dssp SCCGGGSEEEEETCTTSHHHHHHHHHCTTC-EEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTT-SCCCC-SCSEEE
T ss_pred CCCCCCCEEEEeCCChhHHHHHHHHHCCCC-eEEEecC-HHHHHHHHHhhhhcCcCcCeEEecCCCC-CCCCC-CCcEEE
Confidence 334556789999999999999998865432 5677899 8999988865 3 34788888885 45555 799999
Q ss_pred ecccccccccc-hHHHHHHHHHhccCCeEEEEEeCCCCCCCCCC-------------hhhHHHHHHHHHHcCceEEEE
Q 039518 298 CSRCRVDWHAN-DGILLKEVDRVLRPNGYFVYSAPPAYRKDKDY-------------PLIWDKLVNLTTAMCWKLIAR 361 (617)
Q Consensus 298 ~s~~l~h~~~d-~~~~L~el~RvLrPGG~Liis~p~~~~~~~~~-------------~~~W~~le~La~~~gw~~v~~ 361 (617)
+.+++++|.++ ...+|+++.++|+|||++++.++......+.. ....+++.+++++.||+.+..
T Consensus 241 ~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~d~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~ 318 (332)
T 3i53_A 241 LSAVLHDWDDLSAVAILRRCAEAAGSGGVVLVIEAVAGDEHAGTGMDLRMLTYFGGKERSLAELGELAAQAGLAVRAA 318 (332)
T ss_dssp EESCGGGSCHHHHHHHHHHHHHHHTTTCEEEEEECCCC---CCHHHHHHHHHHHSCCCCCHHHHHHHHHHTTEEEEEE
T ss_pred EehhhccCCHHHHHHHHHHHHHhcCCCCEEEEEeecCCCCCccHHHHHHHHhhCCCCCCCHHHHHHHHHHCCCEEEEE
Confidence 99999988732 47899999999999999999876332211100 011344888999999998764
No 103
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.27 E-value=1.6e-11 Score=122.30 Aligned_cols=122 Identities=16% Similarity=0.100 Sum_probs=93.2
Q ss_pred CCCCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHh----CC-CcEEEEecCCCCCCC---CCCeeEEEe
Q 039518 227 AGVFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALER----GI-GAMISALSTKQLPYP---SSSFEMVHC 298 (617)
Q Consensus 227 ~~g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~er----g~-~~~~~~~d~~~Lpf~---d~sFDlV~~ 298 (617)
.++.+|||||||+|.++..|+..... ..++++|+++.+++.|+++ +. ++.+..+|+++++++ +++||+|+|
T Consensus 69 ~~~~~vLDiG~G~G~~~~~la~~~~~-~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~V~~ 147 (240)
T 1xdz_A 69 NQVNTICDVGAGAGFPSLPIKICFPH-LHVTIVDSLNKRITFLEKLSEALQLENTTFCHDRAETFGQRKDVRESYDIVTA 147 (240)
T ss_dssp GGCCEEEEECSSSCTTHHHHHHHCTT-CEEEEEESCHHHHHHHHHHHHHHTCSSEEEEESCHHHHTTCTTTTTCEEEEEE
T ss_pred CCCCEEEEecCCCCHHHHHHHHhCCC-CEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEeccHHHhcccccccCCccEEEE
Confidence 45678999999999999999853222 2688899999999988764 54 578888888777764 678999998
Q ss_pred cccccccccchHHHHHHHHHhccCCeEEEEEeCCCCCCCCCChhhHHHHHHHHHHcCceEEE
Q 039518 299 SRCRVDWHANDGILLKEVDRVLRPNGYFVYSAPPAYRKDKDYPLIWDKLVNLTTAMCWKLIA 360 (617)
Q Consensus 299 s~~l~h~~~d~~~~L~el~RvLrPGG~Liis~p~~~~~~~~~~~~W~~le~La~~~gw~~v~ 360 (617)
.. ..+...++.++.++|+|||++++..... .......+.+.++..||+.+.
T Consensus 148 ~~-----~~~~~~~l~~~~~~LkpgG~l~~~~g~~------~~~~~~~~~~~l~~~g~~~~~ 198 (240)
T 1xdz_A 148 RA-----VARLSVLSELCLPLVKKNGLFVALKAAS------AEEELNAGKKAITTLGGELEN 198 (240)
T ss_dssp EC-----CSCHHHHHHHHGGGEEEEEEEEEEECC-------CHHHHHHHHHHHHHTTEEEEE
T ss_pred ec-----cCCHHHHHHHHHHhcCCCCEEEEEeCCC------chHHHHHHHHHHHHcCCeEeE
Confidence 64 2468899999999999999999874311 112234567778889998765
No 104
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=99.25 E-value=8.6e-12 Score=125.52 Aligned_cols=96 Identities=21% Similarity=0.330 Sum_probs=82.2
Q ss_pred CCCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHhCCCcEEEEecCCCCCCCCCCeeEEEeccccccccc
Q 039518 228 GVFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALERGIGAMISALSTKQLPYPSSSFEMVHCSRCRVDWHA 307 (617)
Q Consensus 228 ~g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~erg~~~~~~~~d~~~Lpf~d~sFDlV~~s~~l~h~~~ 307 (617)
++.+|||||||+|.++..+++... ...++++|+++.+++.|++++.++.+...|...+|+++++||+|+++.+.
T Consensus 85 ~~~~vLdiG~G~G~~~~~l~~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~~----- 158 (269)
T 1p91_A 85 KATAVLDIGCGEGYYTHAFADALP-EITTFGLDVSKVAIKAAAKRYPQVTFCVASSHRLPFSDTSMDAIIRIYAP----- 158 (269)
T ss_dssp TCCEEEEETCTTSTTHHHHHHTCT-TSEEEEEESCHHHHHHHHHHCTTSEEEECCTTSCSBCTTCEEEEEEESCC-----
T ss_pred CCCEEEEECCCCCHHHHHHHHhCC-CCeEEEEeCCHHHHHHHHHhCCCcEEEEcchhhCCCCCCceeEEEEeCCh-----
Confidence 456799999999999999988731 12678889999999999999888899999999999999999999986531
Q ss_pred chHHHHHHHHHhccCCeEEEEEeCC
Q 039518 308 NDGILLKEVDRVLRPNGYFVYSAPP 332 (617)
Q Consensus 308 d~~~~L~el~RvLrPGG~Liis~p~ 332 (617)
..+.++.|+|||||.+++.++.
T Consensus 159 ---~~l~~~~~~L~pgG~l~~~~~~ 180 (269)
T 1p91_A 159 ---CKAEELARVVKPGGWVITATPG 180 (269)
T ss_dssp ---CCHHHHHHHEEEEEEEEEEEEC
T ss_pred ---hhHHHHHHhcCCCcEEEEEEcC
Confidence 2589999999999999999874
No 105
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.25 E-value=6.5e-11 Score=121.18 Aligned_cols=124 Identities=7% Similarity=0.072 Sum_probs=96.0
Q ss_pred CCCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHh----CCC--cEEEEecCCCCCCCCCCeeEEEeccc
Q 039518 228 GVFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALER----GIG--AMISALSTKQLPYPSSSFEMVHCSRC 301 (617)
Q Consensus 228 ~g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~er----g~~--~~~~~~d~~~Lpf~d~sFDlV~~s~~ 301 (617)
++.+|||+|||+|.++..+++.+.. .++++|+++.+++.|+++ +.. +.+..+|+.+++. +++||+|++..
T Consensus 125 ~~~~VLDlgcG~G~~~~~la~~~~~--~V~~vD~s~~~~~~a~~n~~~n~~~~~v~~~~~D~~~~~~-~~~fD~Vi~~~- 200 (278)
T 2frn_A 125 PDELVVDMFAGIGHLSLPIAVYGKA--KVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPG-ENIADRILMGY- 200 (278)
T ss_dssp TTCEEEETTCTTTTTHHHHHHHTCC--EEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCC-CSCEEEEEECC-
T ss_pred CCCEEEEecccCCHHHHHHHHhCCC--EEEEEECCHHHHHHHHHHHHHcCCCceEEEEECCHHHhcc-cCCccEEEECC-
Confidence 4667999999999999999988764 678889999999998875 443 6788889888876 77899999753
Q ss_pred ccccccchHHHHHHHHHhccCCeEEEEEeCCCCCCCCCChhhHHHHHHHHHHcCceEEEE
Q 039518 302 RVDWHANDGILLKEVDRVLRPNGYFVYSAPPAYRKDKDYPLIWDKLVNLTTAMCWKLIAR 361 (617)
Q Consensus 302 l~h~~~d~~~~L~el~RvLrPGG~Liis~p~~~~~~~~~~~~W~~le~La~~~gw~~v~~ 361 (617)
+.....++.++.++|+|||.+++.+......... ...+.+.+.++..||+....
T Consensus 201 ----p~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~--~~~~~i~~~~~~~G~~~~~~ 254 (278)
T 2frn_A 201 ----VVRTHEFIPKALSIAKDGAIIHYHNTVPEKLMPR--EPFETFKRITKEYGYDVEKL 254 (278)
T ss_dssp ----CSSGGGGHHHHHHHEEEEEEEEEEEEEEGGGTTT--TTHHHHHHHHHHTTCEEEEE
T ss_pred ----chhHHHHHHHHHHHCCCCeEEEEEEeeccccccc--cHHHHHHHHHHHcCCeeEEe
Confidence 2245678999999999999999976432111111 22567888999999987663
No 106
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.24 E-value=5.3e-11 Score=111.36 Aligned_cols=122 Identities=14% Similarity=0.065 Sum_probs=95.5
Q ss_pred CCCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHh----CC-CcEEEEecCCCCCCCCCCeeEEEecccc
Q 039518 228 GVFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALER----GI-GAMISALSTKQLPYPSSSFEMVHCSRCR 302 (617)
Q Consensus 228 ~g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~er----g~-~~~~~~~d~~~Lpf~d~sFDlV~~s~~l 302 (617)
++.+|||+|||+|.++..+++.+. .++++|+++.+++.|+++ +. ++.+..+|+.. ++++++||+|+++.+
T Consensus 35 ~~~~vLdiG~G~G~~~~~l~~~~~---~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~~~-~~~~~~~D~i~~~~~- 109 (183)
T 2yxd_A 35 KDDVVVDVGCGSGGMTVEIAKRCK---FVYAIDYLDGAIEVTKQNLAKFNIKNCQIIKGRAED-VLDKLEFNKAFIGGT- 109 (183)
T ss_dssp TTCEEEEESCCCSHHHHHHHTTSS---EEEEEECSHHHHHHHHHHHHHTTCCSEEEEESCHHH-HGGGCCCSEEEECSC-
T ss_pred CCCEEEEeCCCCCHHHHHHHhcCC---eEEEEeCCHHHHHHHHHHHHHcCCCcEEEEECCccc-cccCCCCcEEEECCc-
Confidence 456799999999999999988333 678889999999998876 33 57788888766 666789999999875
Q ss_pred cccccchHHHHHHHHHhccCCeEEEEEeCCCCCCCCCChhhHHHHHHHHHHcCceEEEEeeeeEEE
Q 039518 303 VDWHANDGILLKEVDRVLRPNGYFVYSAPPAYRKDKDYPLIWDKLVNLTTAMCWKLIARKIQTAIW 368 (617)
Q Consensus 303 ~h~~~d~~~~L~el~RvLrPGG~Liis~p~~~~~~~~~~~~W~~le~La~~~gw~~v~~~~~~~Iw 368 (617)
.+...++.++.++ |||.+++..+. .....++.+.+++.||.+...+.....+
T Consensus 110 ----~~~~~~l~~~~~~--~gG~l~~~~~~--------~~~~~~~~~~l~~~g~~~~~~~~~~~~~ 161 (183)
T 2yxd_A 110 ----KNIEKIIEILDKK--KINHIVANTIV--------LENAAKIINEFESRGYNVDAVNVFISYA 161 (183)
T ss_dssp ----SCHHHHHHHHHHT--TCCEEEEEESC--------HHHHHHHHHHHHHTTCEEEEEEEEEEEE
T ss_pred ----ccHHHHHHHHhhC--CCCEEEEEecc--------cccHHHHHHHHHHcCCeEEEEEeeeehh
Confidence 4788899999999 99999998752 1224557888889998877665554444
No 107
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=99.23 E-value=1.2e-11 Score=127.81 Aligned_cols=102 Identities=19% Similarity=0.274 Sum_probs=82.5
Q ss_pred CCCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHhC------------CCcEEEEecCCCCC----CC--
Q 039518 228 GVFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALERG------------IGAMISALSTKQLP----YP-- 289 (617)
Q Consensus 228 ~g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~erg------------~~~~~~~~d~~~Lp----f~-- 289 (617)
++.+|||+|||+|.++..+++.+. ..++++|+++.+++.|+++. .++.+.++|+..++ ++
T Consensus 34 ~~~~VLDlGcG~G~~~~~l~~~~~--~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~ 111 (313)
T 3bgv_A 34 RDITVLDLGCGKGGDLLKWKKGRI--NKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKELLIDKFRDP 111 (313)
T ss_dssp -CCEEEEETCTTTTTHHHHHHTTC--SEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCSTTTCSST
T ss_pred CCCEEEEECCCCcHHHHHHHhcCC--CEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecccccchhhhcccC
Confidence 456799999999999999987643 27888999999999998762 24778889988876 53
Q ss_pred CCCeeEEEeccccccc-c--cchHHHHHHHHHhccCCeEEEEEeC
Q 039518 290 SSSFEMVHCSRCRVDW-H--ANDGILLKEVDRVLRPNGYFVYSAP 331 (617)
Q Consensus 290 d~sFDlV~~s~~l~h~-~--~d~~~~L~el~RvLrPGG~Liis~p 331 (617)
+++||+|+|+.++++. . ++...+|.++.++|||||+++++++
T Consensus 112 ~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~ 156 (313)
T 3bgv_A 112 QMCFDICSCQFVCHYSFESYEQADMMLRNACERLSPGGYFIGTTP 156 (313)
T ss_dssp TCCEEEEEEETCGGGGGGSHHHHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred CCCEEEEEEecchhhccCCHHHHHHHHHHHHHHhCCCcEEEEecC
Confidence 4589999999876554 1 3456899999999999999999986
No 108
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.23 E-value=5.8e-11 Score=111.74 Aligned_cols=118 Identities=12% Similarity=0.100 Sum_probs=91.2
Q ss_pred CCCCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHh----CC--CcEEEEecCCCCCCCC-CCeeEEEec
Q 039518 227 AGVFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALER----GI--GAMISALSTKQLPYPS-SSFEMVHCS 299 (617)
Q Consensus 227 ~~g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~er----g~--~~~~~~~d~~~Lpf~d-~sFDlV~~s 299 (617)
.++.+|||+|||+|.++..+++.+ ..++++|+++.+++.|+++ +. .+.+..+|... ++++ ++||+|++.
T Consensus 32 ~~~~~vldiG~G~G~~~~~l~~~~---~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~~D~v~~~ 107 (192)
T 1l3i_A 32 GKNDVAVDVGCGTGGVTLELAGRV---RRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPE-ALCKIPDIDIAVVG 107 (192)
T ss_dssp CTTCEEEEESCTTSHHHHHHHTTS---SEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHH-HHTTSCCEEEEEES
T ss_pred CCCCEEEEECCCCCHHHHHHHHhc---CEEEEEECCHHHHHHHHHHHHHcCCCcceEEEecCHHH-hcccCCCCCEEEEC
Confidence 456679999999999999999887 3788899999999998874 33 56777777654 2333 589999987
Q ss_pred ccccccccchHHHHHHHHHhccCCeEEEEEeCCCCCCCCCChhhHHHHHHHHHHcCceEEE
Q 039518 300 RCRVDWHANDGILLKEVDRVLRPNGYFVYSAPPAYRKDKDYPLIWDKLVNLTTAMCWKLIA 360 (617)
Q Consensus 300 ~~l~h~~~d~~~~L~el~RvLrPGG~Liis~p~~~~~~~~~~~~W~~le~La~~~gw~~v~ 360 (617)
.++. +...++.++.++|+|||.+++..+. ......+.+++++.||.+..
T Consensus 108 ~~~~----~~~~~l~~~~~~l~~gG~l~~~~~~--------~~~~~~~~~~l~~~g~~~~~ 156 (192)
T 1l3i_A 108 GSGG----ELQEILRIIKDKLKPGGRIIVTAIL--------LETKFEAMECLRDLGFDVNI 156 (192)
T ss_dssp CCTT----CHHHHHHHHHHTEEEEEEEEEEECB--------HHHHHHHHHHHHHTTCCCEE
T ss_pred CchH----HHHHHHHHHHHhcCCCcEEEEEecC--------cchHHHHHHHHHHCCCceEE
Confidence 6443 4678999999999999999998752 12245678888899995444
No 109
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.22 E-value=6.9e-11 Score=116.87 Aligned_cols=130 Identities=12% Similarity=0.092 Sum_probs=92.2
Q ss_pred cccCCCCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHhC---CCcEEEEecCCC----CCCCCCCeeEE
Q 039518 224 LRSAGVFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALERG---IGAMISALSTKQ----LPYPSSSFEMV 296 (617)
Q Consensus 224 lr~~~g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~erg---~~~~~~~~d~~~----Lpf~d~sFDlV 296 (617)
+.+.++.+|||+|||+|.++..|++.... ..+.++|+++.+++.|+++. .++.+..+|+.. +++. ++||+|
T Consensus 70 ~~~~~~~~VLDlGcG~G~~~~~la~~~~~-~~v~gvD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~~~-~~~D~v 147 (230)
T 1fbn_A 70 MPIKRDSKILYLGASAGTTPSHVADIADK-GIVYAIEYAPRIMRELLDACAERENIIPILGDANKPQEYANIV-EKVDVI 147 (230)
T ss_dssp CCCCTTCEEEEESCCSSHHHHHHHHHTTT-SEEEEEESCHHHHHHHHHHTTTCTTEEEEECCTTCGGGGTTTS-CCEEEE
T ss_pred cCCCCCCEEEEEcccCCHHHHHHHHHcCC-cEEEEEECCHHHHHHHHHHhhcCCCeEEEECCCCCcccccccC-ccEEEE
Confidence 34457788999999999999999887322 26888999999999888763 357777888877 7766 789999
Q ss_pred Eecccccccccch---HHHHHHHHHhccCCeEEEEEeCCCCCC-CCCChhhH-HHHHHHHHHcCceEEEEe
Q 039518 297 HCSRCRVDWHAND---GILLKEVDRVLRPNGYFVYSAPPAYRK-DKDYPLIW-DKLVNLTTAMCWKLIARK 362 (617)
Q Consensus 297 ~~s~~l~h~~~d~---~~~L~el~RvLrPGG~Liis~p~~~~~-~~~~~~~W-~~le~La~~~gw~~v~~~ 362 (617)
++ +.. ++ ..++.++.++|||||+++++....... .+...... +.+. ++++.||+.+...
T Consensus 148 ~~-----~~~-~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~l~-~l~~~Gf~~~~~~ 211 (230)
T 1fbn_A 148 YE-----DVA-QPNQAEILIKNAKWFLKKGGYGMIAIKARSIDVTKDPKEIFKEQKE-ILEAGGFKIVDEV 211 (230)
T ss_dssp EE-----CCC-STTHHHHHHHHHHHHEEEEEEEEEEEEGGGTCSSSCHHHHHHHHHH-HHHHHTEEEEEEE
T ss_pred EE-----ecC-ChhHHHHHHHHHHHhCCCCcEEEEEEecCCCCCCCCHHHhhHHHHH-HHHHCCCEEEEEE
Confidence 82 222 44 678999999999999999963211111 11111112 3466 7788899877643
No 110
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.21 E-value=3e-11 Score=125.40 Aligned_cols=101 Identities=11% Similarity=0.156 Sum_probs=80.8
Q ss_pred cccCCCCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHh----CC-CcEEEEecCCCCCCCCCCeeEEEe
Q 039518 224 LRSAGVFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALER----GI-GAMISALSTKQLPYPSSSFEMVHC 298 (617)
Q Consensus 224 lr~~~g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~er----g~-~~~~~~~d~~~Lpf~d~sFDlV~~ 298 (617)
+++.++.+|||||||+|.++..++.+.. ...++++|+++++++.|+++ |. ++.+..+|+..+| +++||+|++
T Consensus 118 a~l~~g~rVLDIGcG~G~~ta~~lA~~~-ga~V~gIDis~~~l~~Ar~~~~~~gl~~v~~v~gDa~~l~--d~~FDvV~~ 194 (298)
T 3fpf_A 118 GRFRRGERAVFIGGGPLPLTGILLSHVY-GMRVNVVEIEPDIAELSRKVIEGLGVDGVNVITGDETVID--GLEFDVLMV 194 (298)
T ss_dssp TTCCTTCEEEEECCCSSCHHHHHHHHTT-CCEEEEEESSHHHHHHHHHHHHHHTCCSEEEEESCGGGGG--GCCCSEEEE
T ss_pred cCCCCcCEEEEECCCccHHHHHHHHHcc-CCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEECchhhCC--CCCcCEEEE
Confidence 4567899999999999977655433311 23788899999999999876 54 5788888887775 789999997
Q ss_pred cccccccccchHHHHHHHHHhccCCeEEEEEeC
Q 039518 299 SRCRVDWHANDGILLKEVDRVLRPNGYFVYSAP 331 (617)
Q Consensus 299 s~~l~h~~~d~~~~L~el~RvLrPGG~Liis~p 331 (617)
... .++...+++++.|+|||||.+++...
T Consensus 195 ~a~----~~d~~~~l~el~r~LkPGG~Lvv~~~ 223 (298)
T 3fpf_A 195 AAL----AEPKRRVFRNIHRYVDTETRIIYRTY 223 (298)
T ss_dssp CTT----CSCHHHHHHHHHHHCCTTCEEEEEEC
T ss_pred CCC----ccCHHHHHHHHHHHcCCCcEEEEEcC
Confidence 542 35788999999999999999999864
No 111
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=99.21 E-value=5.4e-11 Score=122.25 Aligned_cols=102 Identities=12% Similarity=0.202 Sum_probs=79.3
Q ss_pred CCeEEEECCCCcH----HHHHhccC-CC-c-EEEeeecCCcHHHHHHHHHhC----------------------------
Q 039518 229 VFQVLDVGCGVAS----FSAFLLPL-DI-Q-TMSFAPKDGHENQIQFALERG---------------------------- 273 (617)
Q Consensus 229 g~rVLDIGCGtG~----~a~~La~~-gv-~-~v~v~~iDis~~~lq~A~erg---------------------------- 273 (617)
+.+|||+|||||. ++..|++. +. . ...|.++|+|+.+++.|+++.
T Consensus 106 ~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~~~~~ 185 (274)
T 1af7_A 106 EYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGPHEGL 185 (274)
T ss_dssp CEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCTTSCSE
T ss_pred CcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHHhcCCchhhhhcCCHHHHHHHhhccccCCCCc
Confidence 4679999999997 66666554 21 1 238899999999999998751
Q ss_pred --------CCcEEEEecCCCCCCC-CCCeeEEEeccccccccc-chHHHHHHHHHhccCCeEEEEEe
Q 039518 274 --------IGAMISALSTKQLPYP-SSSFEMVHCSRCRVDWHA-NDGILLKEVDRVLRPNGYFVYSA 330 (617)
Q Consensus 274 --------~~~~~~~~d~~~Lpf~-d~sFDlV~~s~~l~h~~~-d~~~~L~el~RvLrPGG~Liis~ 330 (617)
..+.+...|+...|++ .++||+|+|.++++++.+ ....++.++++.|+|||+|++..
T Consensus 186 ~~v~~~lr~~V~F~~~dl~~~~~~~~~~fDlI~crnvliyf~~~~~~~vl~~~~~~L~pgG~L~lg~ 252 (274)
T 1af7_A 186 VRVRQELANYVEFSSVNLLEKQYNVPGPFDAIFCRNVMIYFDKTTQEDILRRFVPLLKPDGLLFAGH 252 (274)
T ss_dssp EEECHHHHTTEEEEECCTTCSSCCCCCCEEEEEECSSGGGSCHHHHHHHHHHHGGGEEEEEEEEECT
T ss_pred eeechhhcccCeEEecccCCCCCCcCCCeeEEEECCchHhCCHHHHHHHHHHHHHHhCCCcEEEEEe
Confidence 1366777888776665 578999999998888762 23789999999999999999953
No 112
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=99.21 E-value=1.2e-10 Score=122.88 Aligned_cols=132 Identities=19% Similarity=0.200 Sum_probs=95.7
Q ss_pred cCCCCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHh----CC--CcEEEEecCCCCCCCCCCeeEEEec
Q 039518 226 SAGVFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALER----GI--GAMISALSTKQLPYPSSSFEMVHCS 299 (617)
Q Consensus 226 ~~~g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~er----g~--~~~~~~~d~~~Lpf~d~sFDlV~~s 299 (617)
..++.+|||||||+|.++..+++.... ..++++|+ +.+++.|+++ +. ++.+..+|+.+ +++.+ ||+|+++
T Consensus 180 ~~~~~~vlDvG~G~G~~~~~l~~~~~~-~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~~~-~D~v~~~ 255 (374)
T 1qzz_A 180 WSAVRHVLDVGGGNGGMLAAIALRAPH-LRGTLVEL-AGPAERARRRFADAGLADRVTVAEGDFFK-PLPVT-ADVVLLS 255 (374)
T ss_dssp CTTCCEEEEETCTTSHHHHHHHHHCTT-CEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTS-CCSCC-EEEEEEE
T ss_pred CCCCCEEEEECCCcCHHHHHHHHHCCC-CEEEEEeC-HHHHHHHHHHHHhcCCCCceEEEeCCCCC-cCCCC-CCEEEEe
Confidence 345678999999999999999987543 26778899 9999988875 33 47888888754 44443 9999999
Q ss_pred ccccccccc-hHHHHHHHHHhccCCeEEEEEeC--CCCCCCCC----------------ChhhHHHHHHHHHHcCceEEE
Q 039518 300 RCRVDWHAN-DGILLKEVDRVLRPNGYFVYSAP--PAYRKDKD----------------YPLIWDKLVNLTTAMCWKLIA 360 (617)
Q Consensus 300 ~~l~h~~~d-~~~~L~el~RvLrPGG~Liis~p--~~~~~~~~----------------~~~~W~~le~La~~~gw~~v~ 360 (617)
.++++|.+. ...+|+++.++|+|||++++.++ ........ ....-+++.+++++.||+.+.
T Consensus 256 ~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGf~~~~ 335 (374)
T 1qzz_A 256 FVLLNWSDEDALTILRGCVRALEPGGRLLVLDRADVEGDGADRFFSTLLDLRMLTFMGGRVRTRDEVVDLAGSAGLALAS 335 (374)
T ss_dssp SCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEECCH-------HHHHHHHHHHHHHHHSCCCCCHHHHHHHHHTTTEEEEE
T ss_pred ccccCCCHHHHHHHHHHHHHhcCCCcEEEEEechhhcCCCCCcchhhhcchHHHHhCCCcCCCHHHHHHHHHHCCCceEE
Confidence 999888732 24899999999999999999876 22111000 001134477888899998876
Q ss_pred E
Q 039518 361 R 361 (617)
Q Consensus 361 ~ 361 (617)
.
T Consensus 336 ~ 336 (374)
T 1qzz_A 336 E 336 (374)
T ss_dssp E
T ss_pred E
Confidence 4
No 113
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=99.20 E-value=1.1e-10 Score=124.08 Aligned_cols=131 Identities=14% Similarity=0.099 Sum_probs=98.8
Q ss_pred cCCCCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHh----C--CCcEEEEecCCCCCCCCCCeeEEEec
Q 039518 226 SAGVFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALER----G--IGAMISALSTKQLPYPSSSFEMVHCS 299 (617)
Q Consensus 226 ~~~g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~er----g--~~~~~~~~d~~~Lpf~d~sFDlV~~s 299 (617)
..++.+|||||||+|.++..++++.... .++++|+ +.+++.|+++ + ..+.+..+|+. .+++. .||+|++.
T Consensus 200 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~-~~~~~D~-~~~~~~a~~~~~~~~l~~~v~~~~~d~~-~~~p~-~~D~v~~~ 275 (369)
T 3gwz_A 200 FSGAATAVDIGGGRGSLMAAVLDAFPGL-RGTLLER-PPVAEEARELLTGRGLADRCEILPGDFF-ETIPD-GADVYLIK 275 (369)
T ss_dssp CTTCSEEEEETCTTSHHHHHHHHHCTTC-EEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTT-TCCCS-SCSEEEEE
T ss_pred CccCcEEEEeCCCccHHHHHHHHHCCCC-eEEEEcC-HHHHHHHHHhhhhcCcCCceEEeccCCC-CCCCC-CceEEEhh
Confidence 3456789999999999999999875432 6678899 8999888865 3 34788888886 56666 79999999
Q ss_pred ccccccccchH--HHHHHHHHhccCCeEEEEEeCCCCCCCCCC---------------hhhHHHHHHHHHHcCceEEEE
Q 039518 300 RCRVDWHANDG--ILLKEVDRVLRPNGYFVYSAPPAYRKDKDY---------------PLIWDKLVNLTTAMCWKLIAR 361 (617)
Q Consensus 300 ~~l~h~~~d~~--~~L~el~RvLrPGG~Liis~p~~~~~~~~~---------------~~~W~~le~La~~~gw~~v~~ 361 (617)
+++++|. +.. .+|+++.++|+|||++++.++......... ....+++.+++++.||+.+..
T Consensus 276 ~vlh~~~-d~~~~~~L~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~d~~~~~~~~g~~~t~~e~~~ll~~aGf~~~~~ 353 (369)
T 3gwz_A 276 HVLHDWD-DDDVVRILRRIATAMKPDSRLLVIDNLIDERPAASTLFVDLLLLVLVGGAERSESEFAALLEKSGLRVERS 353 (369)
T ss_dssp SCGGGSC-HHHHHHHHHHHHTTCCTTCEEEEEEEBCCSSCCHHHHHHHHHHHHHHSCCCBCHHHHHHHHHTTTEEEEEE
T ss_pred hhhccCC-HHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCchhHhhHHHHhhcCCccCCHHHHHHHHHHCCCeEEEE
Confidence 9998887 443 799999999999999999875322111100 011344788999999998874
No 114
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=99.20 E-value=3.2e-11 Score=119.89 Aligned_cols=133 Identities=11% Similarity=0.050 Sum_probs=86.8
Q ss_pred CCCeEEEECCCCcHHHHHhccCCCcEEEeeecCCc-HHHHHHH---HHh----CC-CcEEEEecCCCCCCC-CCCeeEEE
Q 039518 228 GVFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGH-ENQIQFA---LER----GI-GAMISALSTKQLPYP-SSSFEMVH 297 (617)
Q Consensus 228 ~g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis-~~~lq~A---~er----g~-~~~~~~~d~~~Lpf~-d~sFDlV~ 297 (617)
++.+|||||||+|.++..|+++... ..++++|+| +.+++.| +++ +. ++.+..++++.+|.. .+.+|.|+
T Consensus 24 ~~~~vLDiGCG~G~~~~~la~~~~~-~~v~GvD~s~~~ml~~A~~A~~~~~~~~~~~v~~~~~d~~~l~~~~~d~v~~i~ 102 (225)
T 3p2e_A 24 FDRVHIDLGTGDGRNIYKLAINDQN-TFYIGIDPVKENLFDISKKIIKKPSKGGLSNVVFVIAAAESLPFELKNIADSIS 102 (225)
T ss_dssp CSEEEEEETCTTSHHHHHHHHTCTT-EEEEEECSCCGGGHHHHHHHTSCGGGTCCSSEEEECCBTTBCCGGGTTCEEEEE
T ss_pred CCCEEEEEeccCcHHHHHHHHhCCC-CEEEEEeCCHHHHHHHHHHHHHHHHHcCCCCeEEEEcCHHHhhhhccCeEEEEE
Confidence 4556999999999999999865433 378899999 7777666 432 43 478888898888632 24566666
Q ss_pred ecccc----cccccchHHHHHHHHHhccCCeEEEEEeCCCCC-C--------CCCChhhH-H--HHHHHHHHcCceEEEE
Q 039518 298 CSRCR----VDWHANDGILLKEVDRVLRPNGYFVYSAPPAYR-K--------DKDYPLIW-D--KLVNLTTAMCWKLIAR 361 (617)
Q Consensus 298 ~s~~l----~h~~~d~~~~L~el~RvLrPGG~Liis~p~~~~-~--------~~~~~~~W-~--~le~La~~~gw~~v~~ 361 (617)
++... .+...+...+|.++.|+|||||.+++....... . .+.....| . ++..++++.||++...
T Consensus 103 ~~~~~~~~~~~~~~~~~~~l~~~~r~LkpGG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~l~~aGf~v~~~ 182 (225)
T 3p2e_A 103 ILFPWGTLLEYVIKPNRDILSNVADLAKKEAHFEFVTTYSDSYEEAEIKKRGLPLLSKAYFLSEQYKAELSNSGFRIDDV 182 (225)
T ss_dssp EESCCHHHHHHHHTTCHHHHHHHHTTEEEEEEEEEEECCCC--------------CCHHHHHSHHHHHHHHHHTCEEEEE
T ss_pred EeCCCcHHhhhhhcchHHHHHHHHHhcCCCcEEEEEEeccccchhchhhhcCCCCCChhhcchHHHHHHHHHcCCCeeee
Confidence 54321 111123457899999999999999994321110 0 01111112 1 2788889999998764
No 115
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.20 E-value=1.1e-10 Score=116.21 Aligned_cols=122 Identities=15% Similarity=0.143 Sum_probs=95.8
Q ss_pred cCCCCeEEEECCCCcHHHHHhccC-CCcEEEeeecCCcHHHHHHHHHh-----C-CCcEEEEecCCCCCCCCCCeeEEEe
Q 039518 226 SAGVFQVLDVGCGVASFSAFLLPL-DIQTMSFAPKDGHENQIQFALER-----G-IGAMISALSTKQLPYPSSSFEMVHC 298 (617)
Q Consensus 226 ~~~g~rVLDIGCGtG~~a~~La~~-gv~~v~v~~iDis~~~lq~A~er-----g-~~~~~~~~d~~~Lpf~d~sFDlV~~ 298 (617)
+.++.+|||+|||+|.++..+++. +.. ..+.++|+++.+++.|+++ + .++.+...|+.+.++++++||+|++
T Consensus 94 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~-~~v~~~D~~~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~~~~~~~~D~v~~ 172 (258)
T 2pwy_A 94 LAPGMRVLEAGTGSGGLTLFLARAVGEK-GLVESYEARPHHLAQAERNVRAFWQVENVRFHLGKLEEAELEEAAYDGVAL 172 (258)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTT-SEEEEEESCHHHHHHHHHHHHHHCCCCCEEEEESCGGGCCCCTTCEEEEEE
T ss_pred CCCCCEEEEECCCcCHHHHHHHHHhCCC-CEEEEEeCCHHHHHHHHHHHHHhcCCCCEEEEECchhhcCCCCCCcCEEEE
Confidence 356778999999999999999887 322 2678889999999999876 4 3578888898888888889999997
Q ss_pred cccccccccchHHHHHHHHHhccCCeEEEEEeCCCCCCCCCChhhHHHHHHHHHHcCceEEEEe
Q 039518 299 SRCRVDWHANDGILLKEVDRVLRPNGYFVYSAPPAYRKDKDYPLIWDKLVNLTTAMCWKLIARK 362 (617)
Q Consensus 299 s~~l~h~~~d~~~~L~el~RvLrPGG~Liis~p~~~~~~~~~~~~W~~le~La~~~gw~~v~~~ 362 (617)
. . .++..++.++.++|+|||.+++..+.. ....++.+.+++.||..+...
T Consensus 173 ~-----~-~~~~~~l~~~~~~L~~gG~l~~~~~~~--------~~~~~~~~~l~~~gf~~~~~~ 222 (258)
T 2pwy_A 173 D-----L-MEPWKVLEKAALALKPDRFLVAYLPNI--------TQVLELVRAAEAHPFRLERVL 222 (258)
T ss_dssp E-----S-SCGGGGHHHHHHHEEEEEEEEEEESCH--------HHHHHHHHHHTTTTEEEEEEE
T ss_pred C-----C-cCHHHHHHHHHHhCCCCCEEEEEeCCH--------HHHHHHHHHHHHCCCceEEEE
Confidence 3 2 366789999999999999999988632 124456666777899876643
No 116
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=99.19 E-value=8.6e-11 Score=117.62 Aligned_cols=102 Identities=19% Similarity=0.194 Sum_probs=78.0
Q ss_pred CCCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHh----------C-CCcEEEEecCCC-CC--CCCCCe
Q 039518 228 GVFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALER----------G-IGAMISALSTKQ-LP--YPSSSF 293 (617)
Q Consensus 228 ~g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~er----------g-~~~~~~~~d~~~-Lp--f~d~sF 293 (617)
++.+|||||||+|.++..|++..... .+.++|+++.+++.|+++ + .++.+..+|+.. ++ +++++|
T Consensus 46 ~~~~vLDiGcG~G~~~~~la~~~p~~-~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~~~~l~~~~~~~~~ 124 (235)
T 3ckk_A 46 AQVEFADIGCGYGGLLVELSPLFPDT-LILGLEIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSNAMKHLPNFFYKGQL 124 (235)
T ss_dssp CCEEEEEETCTTCHHHHHHGGGSTTS-EEEEEESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECCTTTCHHHHCCTTCE
T ss_pred CCCeEEEEccCCcHHHHHHHHHCCCC-eEEEEECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECcHHHhhhhhCCCcCe
Confidence 44569999999999999999875432 688999999999988643 2 357888889876 66 788999
Q ss_pred eEEEecccccccccc--------hHHHHHHHHHhccCCeEEEEEeC
Q 039518 294 EMVHCSRCRVDWHAN--------DGILLKEVDRVLRPNGYFVYSAP 331 (617)
Q Consensus 294 DlV~~s~~l~h~~~d--------~~~~L~el~RvLrPGG~Liis~p 331 (617)
|.|++... .+|... ...++.++.++|||||.|++.+.
T Consensus 125 D~v~~~~~-dp~~k~~h~krr~~~~~~l~~~~~~LkpGG~l~~~td 169 (235)
T 3ckk_A 125 TKMFFLFP-DPHFKRTKHKWRIISPTLLAEYAYVLRVGGLVYTITD 169 (235)
T ss_dssp EEEEEESC-C-----------CCCHHHHHHHHHHEEEEEEEEEEES
T ss_pred eEEEEeCC-CchhhhhhhhhhhhhHHHHHHHHHHCCCCCEEEEEeC
Confidence 99986532 223211 14699999999999999999874
No 117
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.18 E-value=3.8e-11 Score=118.73 Aligned_cols=132 Identities=11% Similarity=0.052 Sum_probs=89.2
Q ss_pred cccCCCCeEEEECCCCcHHHHHhccC-CCcEEEeeecCCcHHHHH----HHHHhCCCcEEEEecCCC---CCCCCCCeeE
Q 039518 224 LRSAGVFQVLDVGCGVASFSAFLLPL-DIQTMSFAPKDGHENQIQ----FALERGIGAMISALSTKQ---LPYPSSSFEM 295 (617)
Q Consensus 224 lr~~~g~rVLDIGCGtG~~a~~La~~-gv~~v~v~~iDis~~~lq----~A~erg~~~~~~~~d~~~---Lpf~d~sFDl 295 (617)
+.+.++.+|||+|||+|.++..|+++ +.. ..+.++|+++.+++ .|+++ .++.+..+|+.. +++.+++||+
T Consensus 73 ~~~~~~~~vLDlG~G~G~~~~~la~~~g~~-~~v~gvD~s~~~i~~~~~~a~~~-~~v~~~~~d~~~~~~~~~~~~~~D~ 150 (233)
T 2ipx_A 73 IHIKPGAKVLYLGAASGTTVSHVSDIVGPD-GLVYAVEFSHRSGRDLINLAKKR-TNIIPVIEDARHPHKYRMLIAMVDV 150 (233)
T ss_dssp CCCCTTCEEEEECCTTSHHHHHHHHHHCTT-CEEEEECCCHHHHHHHHHHHHHC-TTEEEECSCTTCGGGGGGGCCCEEE
T ss_pred ecCCCCCEEEEEcccCCHHHHHHHHHhCCC-cEEEEEECCHHHHHHHHHHhhcc-CCeEEEEcccCChhhhcccCCcEEE
Confidence 34567889999999999999999886 222 26788899977544 44443 567888888866 4556789999
Q ss_pred EEecccccccccchHHHHHHHHHhccCCeEEEEEeCCCCCCC-CCChhhHHHHHHHHHHcCceEEE
Q 039518 296 VHCSRCRVDWHANDGILLKEVDRVLRPNGYFVYSAPPAYRKD-KDYPLIWDKLVNLTTAMCWKLIA 360 (617)
Q Consensus 296 V~~s~~l~h~~~d~~~~L~el~RvLrPGG~Liis~p~~~~~~-~~~~~~W~~le~La~~~gw~~v~ 360 (617)
|++... .......++.++.++|||||.++++..+..... ......+.+-.+++++.||+.+.
T Consensus 151 V~~~~~---~~~~~~~~~~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~ 213 (233)
T 2ipx_A 151 IFADVA---QPDQTRIVALNAHTFLRNGGHFVISIKANCIDSTASAEAVFASEVKKMQQENMKPQE 213 (233)
T ss_dssp EEECCC---CTTHHHHHHHHHHHHEEEEEEEEEEEEHHHHCSSSCHHHHHHHHHHTTGGGTEEEEE
T ss_pred EEEcCC---CccHHHHHHHHHHHHcCCCeEEEEEEcccccccCCCHHHHHHHHHHHHHHCCCceEE
Confidence 998543 222235568899999999999999765311000 11111122224666788998876
No 118
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.18 E-value=5.8e-11 Score=114.89 Aligned_cols=96 Identities=15% Similarity=0.086 Sum_probs=80.0
Q ss_pred CCCCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHh----CC-CcEEEEecCCCCCCCCCCeeEEEeccc
Q 039518 227 AGVFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALER----GI-GAMISALSTKQLPYPSSSFEMVHCSRC 301 (617)
Q Consensus 227 ~~g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~er----g~-~~~~~~~d~~~Lpf~d~sFDlV~~s~~ 301 (617)
.++.+|||+|||+|.++..+++.+. .++++|+++.+++.|+++ +. ++.+..+|....+.++++||+|++..+
T Consensus 76 ~~~~~vLdiG~G~G~~~~~la~~~~---~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D~i~~~~~ 152 (210)
T 3lbf_A 76 TPQSRVLEIGTGSGYQTAILAHLVQ---HVCSVERIKGLQWQARRRLKNLDLHNVSTRHGDGWQGWQARAPFDAIIVTAA 152 (210)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHSS---EEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGGGCCEEEEEESSB
T ss_pred CCCCEEEEEcCCCCHHHHHHHHhCC---EEEEEecCHHHHHHHHHHHHHcCCCceEEEECCcccCCccCCCccEEEEccc
Confidence 4567899999999999999998843 678889999999999876 33 478888888776666789999999887
Q ss_pred ccccccchHHHHHHHHHhccCCeEEEEEeCC
Q 039518 302 RVDWHANDGILLKEVDRVLRPNGYFVYSAPP 332 (617)
Q Consensus 302 l~h~~~d~~~~L~el~RvLrPGG~Liis~p~ 332 (617)
++++.+ ++.++|||||+++++.+.
T Consensus 153 ~~~~~~-------~~~~~L~pgG~lv~~~~~ 176 (210)
T 3lbf_A 153 PPEIPT-------ALMTQLDEGGILVLPVGE 176 (210)
T ss_dssp CSSCCT-------HHHHTEEEEEEEEEEECS
T ss_pred hhhhhH-------HHHHhcccCcEEEEEEcC
Confidence 776652 689999999999999874
No 119
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=99.18 E-value=1.4e-10 Score=121.57 Aligned_cols=131 Identities=11% Similarity=0.062 Sum_probs=96.9
Q ss_pred CCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHh----CC--CcEEEEecCCCCC-CCCCCeeEEEeccc
Q 039518 229 VFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALER----GI--GAMISALSTKQLP-YPSSSFEMVHCSRC 301 (617)
Q Consensus 229 g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~er----g~--~~~~~~~d~~~Lp-f~d~sFDlV~~s~~ 301 (617)
+.+|||||||+|.++..++++... ..++++|+ +.+++.|+++ +. .+.+..+|+...+ +..+.||+|+++.+
T Consensus 180 ~~~vlDvG~G~G~~~~~l~~~~p~-~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~D~v~~~~v 257 (352)
T 3mcz_A 180 ARTVIDLAGGHGTYLAQVLRRHPQ-LTGQIWDL-PTTRDAARKTIHAHDLGGRVEFFEKNLLDARNFEGGAADVVMLNDC 257 (352)
T ss_dssp CCEEEEETCTTCHHHHHHHHHCTT-CEEEEEEC-GGGHHHHHHHHHHTTCGGGEEEEECCTTCGGGGTTCCEEEEEEESC
T ss_pred CCEEEEeCCCcCHHHHHHHHhCCC-CeEEEEEC-HHHHHHHHHHHHhcCCCCceEEEeCCcccCcccCCCCccEEEEecc
Confidence 678999999999999999987543 35667788 6677777654 43 3788888887765 23456999999999
Q ss_pred cccccc-chHHHHHHHHHhccCCeEEEEEeCCCCCCCC------------------CChhhHHHHHHHHHHcCceEEEE
Q 039518 302 RVDWHA-NDGILLKEVDRVLRPNGYFVYSAPPAYRKDK------------------DYPLIWDKLVNLTTAMCWKLIAR 361 (617)
Q Consensus 302 l~h~~~-d~~~~L~el~RvLrPGG~Liis~p~~~~~~~------------------~~~~~W~~le~La~~~gw~~v~~ 361 (617)
+++|.+ +...+|+++.++|+|||++++.++....... ......+++.+++++.||+.+..
T Consensus 258 lh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~ 336 (352)
T 3mcz_A 258 LHYFDAREAREVIGHAAGLVKPGGALLILTMTMNDDRVTPALSADFSLHMMVNTNHGELHPTPWIAGVVRDAGLAVGER 336 (352)
T ss_dssp GGGSCHHHHHHHHHHHHHTEEEEEEEEEEEECCCTTSSSSHHHHHHHHHHHHHSTTCCCCCHHHHHHHHHHTTCEEEEE
T ss_pred cccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCCchHHHhhHHHHhhCCCCCcCCHHHHHHHHHHCCCceeee
Confidence 988873 2478999999999999999998743221110 00112345888999999998873
No 120
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.17 E-value=3.1e-11 Score=119.42 Aligned_cols=101 Identities=17% Similarity=0.217 Sum_probs=79.4
Q ss_pred CCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHh----CC-CcEEEEecCCCC-C--CCCCCeeEEEecc
Q 039518 229 VFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALER----GI-GAMISALSTKQL-P--YPSSSFEMVHCSR 300 (617)
Q Consensus 229 g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~er----g~-~~~~~~~d~~~L-p--f~d~sFDlV~~s~ 300 (617)
+.+|||||||+|.++..+++..... .+.++|+++.+++.|+++ +. ++.+..+|+..+ + +++++||.|++.+
T Consensus 35 ~~~vLDiGcG~G~~~~~lA~~~p~~-~v~giD~s~~~l~~a~~~~~~~~l~nv~~~~~Da~~~l~~~~~~~~~d~v~~~~ 113 (218)
T 3dxy_A 35 APVTLEIGFGMGASLVAMAKDRPEQ-DFLGIEVHSPGVGACLASAHEEGLSNLRVMCHDAVEVLHKMIPDNSLRMVQLFF 113 (218)
T ss_dssp CCEEEEESCTTCHHHHHHHHHCTTS-EEEEECSCHHHHHHHHHHHHHTTCSSEEEECSCHHHHHHHHSCTTCEEEEEEES
T ss_pred CCeEEEEeeeChHHHHHHHHHCCCC-eEEEEEecHHHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHcCCCChheEEEeC
Confidence 4569999999999999999875433 688899999999888765 43 578888887663 3 6789999999764
Q ss_pred cccccccch--------HHHHHHHHHhccCCeEEEEEeC
Q 039518 301 CRVDWHAND--------GILLKEVDRVLRPNGYFVYSAP 331 (617)
Q Consensus 301 ~l~h~~~d~--------~~~L~el~RvLrPGG~Liis~p 331 (617)
. .+|.... ..++.++.|+|||||+|++++.
T Consensus 114 ~-~p~~~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i~td 151 (218)
T 3dxy_A 114 P-DPWHKARHNKRRIVQVPFAELVKSKLQLGGVFHMATD 151 (218)
T ss_dssp C-CCCCSGGGGGGSSCSHHHHHHHHHHEEEEEEEEEEES
T ss_pred C-CCccchhhhhhhhhhHHHHHHHHHHcCCCcEEEEEeC
Confidence 2 3444221 2599999999999999999874
No 121
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.17 E-value=1.4e-10 Score=118.00 Aligned_cols=121 Identities=14% Similarity=0.186 Sum_probs=94.0
Q ss_pred ccCCCCeEEEECCCCcHHHHHhccC-CCcEEEeeecCCcHHHHHHHHHh-----CC-CcEEEEecCCCCCCCCCCeeEEE
Q 039518 225 RSAGVFQVLDVGCGVASFSAFLLPL-DIQTMSFAPKDGHENQIQFALER-----GI-GAMISALSTKQLPYPSSSFEMVH 297 (617)
Q Consensus 225 r~~~g~rVLDIGCGtG~~a~~La~~-gv~~v~v~~iDis~~~lq~A~er-----g~-~~~~~~~d~~~Lpf~d~sFDlV~ 297 (617)
...++.+|||+|||+|.++..+++. +. ...++++|+++.+++.|+++ +. ++.+..+|+.. ++++++||+|+
T Consensus 107 ~~~~~~~VLD~G~G~G~~~~~la~~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~g~~~v~~~~~d~~~-~~~~~~fD~Vi 184 (275)
T 1yb2_A 107 GLRPGMDILEVGVGSGNMSSYILYALNG-KGTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRSDIAD-FISDQMYDAVI 184 (275)
T ss_dssp CCCTTCEEEEECCTTSHHHHHHHHHHTT-SSEEEEECSCHHHHHHHHHHHHTTSCCTTEEEECSCTTT-CCCSCCEEEEE
T ss_pred CCCCcCEEEEecCCCCHHHHHHHHHcCC-CCEEEEEECCHHHHHHHHHHHHhcCCCCcEEEEECchhc-cCcCCCccEEE
Confidence 4567788999999999999999886 22 12678889999999998876 43 47788888766 66778999999
Q ss_pred ecccccccccchHHHHHHHHHhccCCeEEEEEeCCCCCCCCCChhhHHHHHHHHHHcCceEEEE
Q 039518 298 CSRCRVDWHANDGILLKEVDRVLRPNGYFVYSAPPAYRKDKDYPLIWDKLVNLTTAMCWKLIAR 361 (617)
Q Consensus 298 ~s~~l~h~~~d~~~~L~el~RvLrPGG~Liis~p~~~~~~~~~~~~W~~le~La~~~gw~~v~~ 361 (617)
+ +. .++..++.++.++|+|||.++++++.. ...+.+.+.++..||..+..
T Consensus 185 ~-----~~-~~~~~~l~~~~~~LkpgG~l~i~~~~~--------~~~~~~~~~l~~~Gf~~~~~ 234 (275)
T 1yb2_A 185 A-----DI-PDPWNHVQKIASMMKPGSVATFYLPNF--------DQSEKTVLSLSASGMHHLET 234 (275)
T ss_dssp E-----CC-SCGGGSHHHHHHTEEEEEEEEEEESSH--------HHHHHHHHHSGGGTEEEEEE
T ss_pred E-----cC-cCHHHHHHHHHHHcCCCCEEEEEeCCH--------HHHHHHHHHHHHCCCeEEEE
Confidence 7 23 367789999999999999999998632 11345666677789887663
No 122
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=99.17 E-value=1.3e-10 Score=120.91 Aligned_cols=128 Identities=16% Similarity=0.109 Sum_probs=95.5
Q ss_pred CeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHh------CCCcEEEEecCCCCCCCCCCeeEEEeccccc
Q 039518 230 FQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALER------GIGAMISALSTKQLPYPSSSFEMVHCSRCRV 303 (617)
Q Consensus 230 ~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~er------g~~~~~~~~d~~~Lpf~d~sFDlV~~s~~l~ 303 (617)
.+|||||||+|.++..++++... ..++++|+ +.+++.|+++ ...+.+..+|+.+ +++ ++||+|++..+++
T Consensus 169 ~~vlDvG~G~G~~~~~l~~~~p~-~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~-~~~D~v~~~~vl~ 244 (334)
T 2ip2_A 169 RSFVDVGGGSGELTKAILQAEPS-ARGVMLDR-EGSLGVARDNLSSLLAGERVSLVGGDMLQ-EVP-SNGDIYLLSRIIG 244 (334)
T ss_dssp CEEEEETCTTCHHHHHHHHHCTT-CEEEEEEC-TTCTHHHHHHTHHHHHTTSEEEEESCTTT-CCC-SSCSEEEEESCGG
T ss_pred CEEEEeCCCchHHHHHHHHHCCC-CEEEEeCc-HHHHHHHHHHHhhcCCCCcEEEecCCCCC-CCC-CCCCEEEEchhcc
Confidence 67999999999999999887433 26778899 8888888775 2357888888766 555 6799999999998
Q ss_pred cccc-chHHHHHHHHHhccCCeEEEEEeCCCCCCCCC----------------ChhhHHHHHHHHHHcCceEEEE
Q 039518 304 DWHA-NDGILLKEVDRVLRPNGYFVYSAPPAYRKDKD----------------YPLIWDKLVNLTTAMCWKLIAR 361 (617)
Q Consensus 304 h~~~-d~~~~L~el~RvLrPGG~Liis~p~~~~~~~~----------------~~~~W~~le~La~~~gw~~v~~ 361 (617)
+|.+ +...+|+++.++|+|||++++.+......... ....-+++.+++++.||+.+..
T Consensus 245 ~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~ 319 (334)
T 2ip2_A 245 DLDEAASLRLLGNCREAMAGDGRVVVIERTISASEPSPMSVLWDVHLFMACAGRHRTTEEVVDLLGRGGFAVERI 319 (334)
T ss_dssp GCCHHHHHHHHHHHHHHSCTTCEEEEEECCBCSSSCCHHHHHHHHHHHHHHSCCCCBHHHHHHHHHHTTEEEEEE
T ss_pred CCCHHHHHHHHHHHHHhcCCCCEEEEEEeccCCCCCcchhHHhhhHhHhhCCCcCCCHHHHHHHHHHCCCceeEE
Confidence 8872 23489999999999999999987532211110 0011344788889999987764
No 123
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=99.17 E-value=2.1e-10 Score=115.16 Aligned_cols=131 Identities=10% Similarity=0.035 Sum_probs=87.5
Q ss_pred CcccCCCCeEEEECCCCcHHHHHhccC-CCcEEEeeecCCcHHHH----HHHHHhCCCcEEEEecCCCCC---CCCCCee
Q 039518 223 NLRSAGVFQVLDVGCGVASFSAFLLPL-DIQTMSFAPKDGHENQI----QFALERGIGAMISALSTKQLP---YPSSSFE 294 (617)
Q Consensus 223 ~lr~~~g~rVLDIGCGtG~~a~~La~~-gv~~v~v~~iDis~~~l----q~A~erg~~~~~~~~d~~~Lp---f~d~sFD 294 (617)
.+.+.+|.+|||+|||+|.++..+++. +... .+.++|+++.++ +.|+++ .++.+..+|+.... ...++||
T Consensus 71 ~~~l~~g~~VLDlG~GtG~~t~~la~~v~~~G-~V~avD~s~~~l~~l~~~a~~r-~nv~~i~~Da~~~~~~~~~~~~~D 148 (232)
T 3id6_C 71 TNPIRKGTKVLYLGAASGTTISHVSDIIELNG-KAYGVEFSPRVVRELLLVAQRR-PNIFPLLADARFPQSYKSVVENVD 148 (232)
T ss_dssp CCSCCTTCEEEEETCTTSHHHHHHHHHHTTTS-EEEEEECCHHHHHHHHHHHHHC-TTEEEEECCTTCGGGTTTTCCCEE
T ss_pred hcCCCCCCEEEEEeecCCHHHHHHHHHhCCCC-EEEEEECcHHHHHHHHHHhhhc-CCeEEEEcccccchhhhccccceE
Confidence 356788999999999999999999875 3222 678889999775 344444 46788888876532 1246899
Q ss_pred EEEecccccccccchH-HHHHHHHHhccCCeEEEEEeCCCC--C-CCCCChhhHHHHHHHHHHcCceEEEE
Q 039518 295 MVHCSRCRVDWHANDG-ILLKEVDRVLRPNGYFVYSAPPAY--R-KDKDYPLIWDKLVNLTTAMCWKLIAR 361 (617)
Q Consensus 295 lV~~s~~l~h~~~d~~-~~L~el~RvLrPGG~Liis~p~~~--~-~~~~~~~~W~~le~La~~~gw~~v~~ 361 (617)
+|++.... . +.. .++..+.++|||||.|+++..... . ..+... .+.....++..||+++..
T Consensus 149 ~I~~d~a~---~-~~~~il~~~~~~~LkpGG~lvisik~~~~d~t~~~~e~--~~~~~~~L~~~gf~~~~~ 213 (232)
T 3id6_C 149 VLYVDIAQ---P-DQTDIAIYNAKFFLKVNGDMLLVIKARSIDVTKDPKEI--YKTEVEKLENSNFETIQI 213 (232)
T ss_dssp EEEECCCC---T-THHHHHHHHHHHHEEEEEEEEEEEC-------CCSSSS--TTHHHHHHHHTTEEEEEE
T ss_pred EEEecCCC---h-hHHHHHHHHHHHhCCCCeEEEEEEccCCcccCCCHHHH--HHHHHHHHHHCCCEEEEE
Confidence 99987422 3 343 445566779999999999864321 1 111111 334556667779998874
No 124
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.17 E-value=8.7e-11 Score=118.59 Aligned_cols=122 Identities=17% Similarity=0.123 Sum_probs=93.2
Q ss_pred CCCCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHh----CC-CcEEEEecCCCCCCC---CCCeeEEEe
Q 039518 227 AGVFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALER----GI-GAMISALSTKQLPYP---SSSFEMVHC 298 (617)
Q Consensus 227 ~~g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~er----g~-~~~~~~~d~~~Lpf~---d~sFDlV~~ 298 (617)
.++.+|||||||+|..+..|+..... ..++++|+++.+++.|+++ +. ++.+..+++++++.. +++||+|+|
T Consensus 79 ~~~~~vLDiG~G~G~~~i~la~~~~~-~~v~~vD~s~~~~~~a~~~~~~~~l~~v~~~~~d~~~~~~~~~~~~~fD~I~s 157 (249)
T 3g89_A 79 QGPLRVLDLGTGAGFPGLPLKIVRPE-LELVLVDATRKKVAFVERAIEVLGLKGARALWGRAEVLAREAGHREAYARAVA 157 (249)
T ss_dssp CSSCEEEEETCTTTTTHHHHHHHCTT-CEEEEEESCHHHHHHHHHHHHHHTCSSEEEEECCHHHHTTSTTTTTCEEEEEE
T ss_pred CCCCEEEEEcCCCCHHHHHHHHHCCC-CEEEEEECCHHHHHHHHHHHHHhCCCceEEEECcHHHhhcccccCCCceEEEE
Confidence 46778999999999999999876432 2788899999999998875 54 478888888777643 478999997
Q ss_pred cccccccccchHHHHHHHHHhccCCeEEEEEeCCCCCCCCCChhhHHHHHHHHHHcCceEEE
Q 039518 299 SRCRVDWHANDGILLKEVDRVLRPNGYFVYSAPPAYRKDKDYPLIWDKLVNLTTAMCWKLIA 360 (617)
Q Consensus 299 s~~l~h~~~d~~~~L~el~RvLrPGG~Liis~p~~~~~~~~~~~~W~~le~La~~~gw~~v~ 360 (617)
..+ .+...++.++.++|||||++++.... ........+...++..||+...
T Consensus 158 ~a~-----~~~~~ll~~~~~~LkpgG~l~~~~g~------~~~~e~~~~~~~l~~~G~~~~~ 208 (249)
T 3g89_A 158 RAV-----APLCVLSELLLPFLEVGGAAVAMKGP------RVEEELAPLPPALERLGGRLGE 208 (249)
T ss_dssp ESS-----CCHHHHHHHHGGGEEEEEEEEEEECS------CCHHHHTTHHHHHHHHTEEEEE
T ss_pred CCc-----CCHHHHHHHHHHHcCCCeEEEEEeCC------CcHHHHHHHHHHHHHcCCeEEE
Confidence 532 35778999999999999999886531 1111234467777888998775
No 125
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.17 E-value=6.7e-11 Score=119.41 Aligned_cols=120 Identities=13% Similarity=0.055 Sum_probs=92.7
Q ss_pred CCCCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHh----CCCcEEEEecCCCCCCCCCCeeEEEecccc
Q 039518 227 AGVFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALER----GIGAMISALSTKQLPYPSSSFEMVHCSRCR 302 (617)
Q Consensus 227 ~~g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~er----g~~~~~~~~d~~~Lpf~d~sFDlV~~s~~l 302 (617)
.++.+|||+|||+|.++..+++.+. .+.++|+++.+++.|+++ +..+.+..++.... +++++||+|+++...
T Consensus 119 ~~~~~VLDiGcG~G~l~~~la~~g~---~v~gvDi~~~~v~~a~~n~~~~~~~v~~~~~d~~~~-~~~~~fD~Vv~n~~~ 194 (254)
T 2nxc_A 119 RPGDKVLDLGTGSGVLAIAAEKLGG---KALGVDIDPMVLPQAEANAKRNGVRPRFLEGSLEAA-LPFGPFDLLVANLYA 194 (254)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHTTC---EEEEEESCGGGHHHHHHHHHHTTCCCEEEESCHHHH-GGGCCEEEEEEECCH
T ss_pred CCCCEEEEecCCCcHHHHHHHHhCC---eEEEEECCHHHHHHHHHHHHHcCCcEEEEECChhhc-CcCCCCCEEEECCcH
Confidence 3456799999999999999998876 678889999999988875 44467777665442 446789999986432
Q ss_pred cccccchHHHHHHHHHhccCCeEEEEEeCCCCCCCCCChhhHHHHHHHHHHcCceEEEEe
Q 039518 303 VDWHANDGILLKEVDRVLRPNGYFVYSAPPAYRKDKDYPLIWDKLVNLTTAMCWKLIARK 362 (617)
Q Consensus 303 ~h~~~d~~~~L~el~RvLrPGG~Liis~p~~~~~~~~~~~~W~~le~La~~~gw~~v~~~ 362 (617)
. ....++.++.++|+|||++++++... ...+.+.+++++.||+++...
T Consensus 195 ~----~~~~~l~~~~~~LkpgG~lils~~~~--------~~~~~v~~~l~~~Gf~~~~~~ 242 (254)
T 2nxc_A 195 E----LHAALAPRYREALVPGGRALLTGILK--------DRAPLVREAMAGAGFRPLEEA 242 (254)
T ss_dssp H----HHHHHHHHHHHHEEEEEEEEEEEEEG--------GGHHHHHHHHHHTTCEEEEEE
T ss_pred H----HHHHHHHHHHHHcCCCCEEEEEeecc--------CCHHHHHHHHHHCCCEEEEEe
Confidence 2 35679999999999999999986421 114568888999999987754
No 126
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=99.16 E-value=1.6e-10 Score=122.87 Aligned_cols=131 Identities=15% Similarity=0.081 Sum_probs=97.4
Q ss_pred cCCCCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHhCCCcEEEEecCCCCCCCCCCeeEEEeccccccc
Q 039518 226 SAGVFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALERGIGAMISALSTKQLPYPSSSFEMVHCSRCRVDW 305 (617)
Q Consensus 226 ~~~g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~erg~~~~~~~~d~~~Lpf~d~sFDlV~~s~~l~h~ 305 (617)
..++.+|||||||+|.++..++++.... .++..|+ +.+++.|+++ .++.+..+|+.+ |++++ |+|+++.++|+|
T Consensus 201 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~-~~~~~D~-~~~~~~a~~~-~~v~~~~~d~~~-~~p~~--D~v~~~~vlh~~ 274 (368)
T 3reo_A 201 FEGLTTIVDVGGGTGAVASMIVAKYPSI-NAINFDL-PHVIQDAPAF-SGVEHLGGDMFD-GVPKG--DAIFIKWICHDW 274 (368)
T ss_dssp TTTCSEEEEETCTTSHHHHHHHHHCTTC-EEEEEEC-HHHHTTCCCC-TTEEEEECCTTT-CCCCC--SEEEEESCGGGB
T ss_pred ccCCCEEEEeCCCcCHHHHHHHHhCCCC-EEEEEeh-HHHHHhhhhc-CCCEEEecCCCC-CCCCC--CEEEEechhhcC
Confidence 4566789999999999999999875433 5677898 7787777654 458888899876 77754 999999999988
Q ss_pred cc-chHHHHHHHHHhccCCeEEEEEeCCCCCCCCCC---------------------hhhHHHHHHHHHHcCceEEEEe
Q 039518 306 HA-NDGILLKEVDRVLRPNGYFVYSAPPAYRKDKDY---------------------PLIWDKLVNLTTAMCWKLIARK 362 (617)
Q Consensus 306 ~~-d~~~~L~el~RvLrPGG~Liis~p~~~~~~~~~---------------------~~~W~~le~La~~~gw~~v~~~ 362 (617)
.+ +...+|++++++|+|||+++|.+.......... ...-+++.++++++||+.+...
T Consensus 275 ~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~g~~rt~~e~~~ll~~AGF~~v~~~ 353 (368)
T 3reo_A 275 SDEHCLKLLKNCYAALPDHGKVIVAEYILPPSPDPSIATKVVIHTDALMLAYNPGGKERTEKEFQALAMASGFRGFKVA 353 (368)
T ss_dssp CHHHHHHHHHHHHHHSCTTCEEEEEECCCCSSCCCCHHHHHHHHHHHHHHHHSSBCCCCCHHHHHHHHHHTTCCEEEEE
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCchhhhHHHhhhHHHHhhcCCCccCCHHHHHHHHHHCCCeeeEEE
Confidence 73 245789999999999999999875322211110 0112347889999999988743
No 127
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.16 E-value=4.2e-11 Score=116.35 Aligned_cols=103 Identities=12% Similarity=0.021 Sum_probs=80.1
Q ss_pred CCCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHh----CC---CcEEEEecCCCCC--CCCCC-eeEEE
Q 039518 228 GVFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALER----GI---GAMISALSTKQLP--YPSSS-FEMVH 297 (617)
Q Consensus 228 ~g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~er----g~---~~~~~~~d~~~Lp--f~d~s-FDlV~ 297 (617)
++.+|||+|||+|.++..++.++.. .++++|+++.+++.|+++ +. ++.+..+|+.++. +++++ ||+|+
T Consensus 53 ~~~~vLDlGcGtG~~~~~~~~~~~~--~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~ 130 (201)
T 2ift_A 53 HQSECLDGFAGSGSLGFEALSRQAK--KVTFLELDKTVANQLKKNLQTLKCSSEQAEVINQSSLDFLKQPQNQPHFDVVF 130 (201)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTTCS--EEEEECSCHHHHHHHHHHHHHTTCCTTTEEEECSCHHHHTTSCCSSCCEEEEE
T ss_pred CCCeEEEcCCccCHHHHHHHHccCC--EEEEEECCHHHHHHHHHHHHHhCCCccceEEEECCHHHHHHhhccCCCCCEEE
Confidence 3457999999999999988777643 688899999999999875 43 5788888875543 23678 99999
Q ss_pred ecccccccccchHHHHHHH--HHhccCCeEEEEEeCCCC
Q 039518 298 CSRCRVDWHANDGILLKEV--DRVLRPNGYFVYSAPPAY 334 (617)
Q Consensus 298 ~s~~l~h~~~d~~~~L~el--~RvLrPGG~Liis~p~~~ 334 (617)
+...+ + ..+...++.++ .|+|+|||.++++..+..
T Consensus 131 ~~~~~-~-~~~~~~~l~~~~~~~~LkpgG~l~i~~~~~~ 167 (201)
T 2ift_A 131 LDPPF-H-FNLAEQAISLLCENNWLKPNALIYVETEKDK 167 (201)
T ss_dssp ECCCS-S-SCHHHHHHHHHHHTTCEEEEEEEEEEEESSS
T ss_pred ECCCC-C-CccHHHHHHHHHhcCccCCCcEEEEEECCCC
Confidence 87653 3 34567788888 778999999999876443
No 128
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=99.16 E-value=1.3e-10 Score=122.46 Aligned_cols=133 Identities=17% Similarity=0.186 Sum_probs=99.2
Q ss_pred cCCCCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHh----CC--CcEEEEecCCCCCCCCCCeeEEEec
Q 039518 226 SAGVFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALER----GI--GAMISALSTKQLPYPSSSFEMVHCS 299 (617)
Q Consensus 226 ~~~g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~er----g~--~~~~~~~d~~~Lpf~d~sFDlV~~s 299 (617)
..++.+|||||||+|.++..++++... ..++++|+ +.+++.|+++ +. .+.+..+|+.+.|+++. |+|+++
T Consensus 188 ~~~~~~vLDvG~G~G~~~~~l~~~~p~-~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~--D~v~~~ 263 (359)
T 1x19_A 188 LDGVKKMIDVGGGIGDISAAMLKHFPE-LDSTILNL-PGAIDLVNENAAEKGVADRMRGIAVDIYKESYPEA--DAVLFC 263 (359)
T ss_dssp CTTCCEEEEESCTTCHHHHHHHHHCTT-CEEEEEEC-GGGHHHHHHHHHHTTCTTTEEEEECCTTTSCCCCC--SEEEEE
T ss_pred CCCCCEEEEECCcccHHHHHHHHHCCC-CeEEEEec-HHHHHHHHHHHHhcCCCCCEEEEeCccccCCCCCC--CEEEEe
Confidence 345678999999999999999987543 26778899 8888888865 33 37888899888777654 999999
Q ss_pred cccccccc-chHHHHHHHHHhccCCeEEEEEeCCCCCC-CC------------CCh------hhHHHHHHHHHHcCceEE
Q 039518 300 RCRVDWHA-NDGILLKEVDRVLRPNGYFVYSAPPAYRK-DK------------DYP------LIWDKLVNLTTAMCWKLI 359 (617)
Q Consensus 300 ~~l~h~~~-d~~~~L~el~RvLrPGG~Liis~p~~~~~-~~------------~~~------~~W~~le~La~~~gw~~v 359 (617)
.++++|.+ +...+|+++.++|+|||++++.+...... .+ ... ...+++.+++++.||+.+
T Consensus 264 ~vlh~~~d~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~t~~e~~~ll~~aGf~~v 343 (359)
T 1x19_A 264 RILYSANEQLSTIMCKKAFDAMRSGGRLLILDMVIDDPENPNFDYLSHYILGAGMPFSVLGFKEQARYKEILESLGYKDV 343 (359)
T ss_dssp SCGGGSCHHHHHHHHHHHHTTCCTTCEEEEEEECCCCTTSCCHHHHHHHGGGGGSSCCCCCCCCGGGHHHHHHHHTCEEE
T ss_pred chhccCCHHHHHHHHHHHHHhcCCCCEEEEEecccCCCCCchHHHHHHHHHhcCCCCcccCCCCHHHHHHHHHHCCCceE
Confidence 99988873 36789999999999999998886322110 00 000 123447888899999987
Q ss_pred EEe
Q 039518 360 ARK 362 (617)
Q Consensus 360 ~~~ 362 (617)
...
T Consensus 344 ~~~ 346 (359)
T 1x19_A 344 TMV 346 (359)
T ss_dssp EEE
T ss_pred EEE
Confidence 643
No 129
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=99.16 E-value=9.4e-11 Score=123.96 Aligned_cols=100 Identities=15% Similarity=0.192 Sum_probs=80.4
Q ss_pred CCCCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHh----CCC--cEEEEecCCCCCCCCCCeeEEEecc
Q 039518 227 AGVFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALER----GIG--AMISALSTKQLPYPSSSFEMVHCSR 300 (617)
Q Consensus 227 ~~g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~er----g~~--~~~~~~d~~~Lpf~d~sFDlV~~s~ 300 (617)
.++.+|||||||+|.++..+++++.. .+.++|+++ +++.|+++ +.. +.+..++++++++++++||+|++..
T Consensus 65 ~~~~~VLDvGcG~G~~~~~la~~g~~--~v~gvD~s~-~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~Iis~~ 141 (349)
T 3q7e_A 65 FKDKVVLDVGSGTGILCMFAAKAGAR--KVIGIECSS-ISDYAVKIVKANKLDHVVTIIKGKVEEVELPVEKVDIIISEW 141 (349)
T ss_dssp HTTCEEEEESCTTSHHHHHHHHTTCS--EEEEEECST-HHHHHHHHHHHTTCTTTEEEEESCTTTCCCSSSCEEEEEECC
T ss_pred CCCCEEEEEeccchHHHHHHHHCCCC--EEEEECcHH-HHHHHHHHHHHcCCCCcEEEEECcHHHccCCCCceEEEEEcc
Confidence 35567999999999999999998542 678889994 77777764 443 7899999999999989999999864
Q ss_pred ccc--ccccchHHHHHHHHHhccCCeEEEEE
Q 039518 301 CRV--DWHANDGILLKEVDRVLRPNGYFVYS 329 (617)
Q Consensus 301 ~l~--h~~~d~~~~L~el~RvLrPGG~Liis 329 (617)
+.. +...+...++.++.|+|||||+++..
T Consensus 142 ~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~ 172 (349)
T 3q7e_A 142 MGYCLFYESMLNTVLHARDKWLAPDGLIFPD 172 (349)
T ss_dssp CBBTBTBTCCHHHHHHHHHHHEEEEEEEESC
T ss_pred ccccccCchhHHHHHHHHHHhCCCCCEEccc
Confidence 322 22357888999999999999999743
No 130
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=99.16 E-value=6.7e-11 Score=125.62 Aligned_cols=128 Identities=13% Similarity=0.086 Sum_probs=94.9
Q ss_pred CCCCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHhCCCcEEEEecCCCCCCCCCCeeEEEecccccccc
Q 039518 227 AGVFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALERGIGAMISALSTKQLPYPSSSFEMVHCSRCRVDWH 306 (617)
Q Consensus 227 ~~g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~erg~~~~~~~~d~~~Lpf~d~sFDlV~~s~~l~h~~ 306 (617)
.++.+|||||||+|.++..++++.... .+.++|+ +.+++.|++. ..+.+..+|+.. ++++ ||+|+++.+++||.
T Consensus 208 ~~~~~vLDvG~G~G~~~~~l~~~~~~~-~~~~~D~-~~~~~~a~~~-~~v~~~~~d~~~-~~~~--~D~v~~~~~lh~~~ 281 (372)
T 1fp1_D 208 EGISTLVDVGGGSGRNLELIISKYPLI-KGINFDL-PQVIENAPPL-SGIEHVGGDMFA-SVPQ--GDAMILKAVCHNWS 281 (372)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTC-EEEEEEC-HHHHTTCCCC-TTEEEEECCTTT-CCCC--EEEEEEESSGGGSC
T ss_pred CCCCEEEEeCCCCcHHHHHHHHHCCCC-eEEEeCh-HHHHHhhhhc-CCCEEEeCCccc-CCCC--CCEEEEecccccCC
Confidence 456789999999999999999876543 5667799 8888877653 347888888866 6664 99999999998887
Q ss_pred cchH--HHHHHHHHhccCCeEEEEEeCCCCCCCCC--------------------ChhhHHHHHHHHHHcCceEEEE
Q 039518 307 ANDG--ILLKEVDRVLRPNGYFVYSAPPAYRKDKD--------------------YPLIWDKLVNLTTAMCWKLIAR 361 (617)
Q Consensus 307 ~d~~--~~L~el~RvLrPGG~Liis~p~~~~~~~~--------------------~~~~W~~le~La~~~gw~~v~~ 361 (617)
++. .+|+++.++|+|||++++.+......... .....+++.+++++.||+.+..
T Consensus 282 -d~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~ 357 (372)
T 1fp1_D 282 -DEKCIEFLSNCHKALSPNGKVIIVEFILPEEPNTSEESKLVSTLDNLMFITVGGRERTEKQYEKLSKLSGFSKFQV 357 (372)
T ss_dssp -HHHHHHHHHHHHHHEEEEEEEEEEEEEECSSCCSSHHHHHHHHHHHHHHHHHSCCCEEHHHHHHHHHHTTCSEEEE
T ss_pred -HHHHHHHHHHHHHhcCCCCEEEEEEeccCCCCccchHHHHHHHhhHHHHhccCCccCCHHHHHHHHHHCCCceEEE
Confidence 555 89999999999999999985321111000 0011234778888889887764
No 131
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=99.15 E-value=2.5e-10 Score=120.06 Aligned_cols=131 Identities=16% Similarity=0.026 Sum_probs=93.3
Q ss_pred ccCCCCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHH--h--CCCcEEEEecCCCCCCCCCCeeEEEecc
Q 039518 225 RSAGVFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALE--R--GIGAMISALSTKQLPYPSSSFEMVHCSR 300 (617)
Q Consensus 225 r~~~g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~e--r--g~~~~~~~~d~~~Lpf~d~sFDlV~~s~ 300 (617)
...++.+|||||||+|.++..++++.... .++.+|+++.. ..++. . ...+.+..+|+. .+++ +||+|+++.
T Consensus 181 ~~~~~~~vLDvG~G~G~~~~~l~~~~p~~-~~~~~D~~~~~-~~~~~~~~~~~~~v~~~~~d~~-~~~p--~~D~v~~~~ 255 (348)
T 3lst_A 181 DFPATGTVADVGGGRGGFLLTVLREHPGL-QGVLLDRAEVV-ARHRLDAPDVAGRWKVVEGDFL-REVP--HADVHVLKR 255 (348)
T ss_dssp CCCSSEEEEEETCTTSHHHHHHHHHCTTE-EEEEEECHHHH-TTCCCCCGGGTTSEEEEECCTT-TCCC--CCSEEEEES
T ss_pred CccCCceEEEECCccCHHHHHHHHHCCCC-EEEEecCHHHh-hcccccccCCCCCeEEEecCCC-CCCC--CCcEEEEeh
Confidence 34567789999999999999999875543 56778885433 31110 1 224788888875 3445 899999999
Q ss_pred cccccccch--HHHHHHHHHhccCCeEEEEEeCCCCCCCCCC----------------hhhHHHHHHHHHHcCceEEEE
Q 039518 301 CRVDWHAND--GILLKEVDRVLRPNGYFVYSAPPAYRKDKDY----------------PLIWDKLVNLTTAMCWKLIAR 361 (617)
Q Consensus 301 ~l~h~~~d~--~~~L~el~RvLrPGG~Liis~p~~~~~~~~~----------------~~~W~~le~La~~~gw~~v~~ 361 (617)
++++|. +. ..+|+++.++|||||++++.+.......... ....+++.+++++.||+.+..
T Consensus 256 vlh~~~-d~~~~~~L~~~~~~LkpgG~l~i~e~~~~~~~~~~~~~~~d~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~ 333 (348)
T 3lst_A 256 ILHNWG-DEDSVRILTNCRRVMPAHGRVLVIDAVVPEGNDAHQSKEMDFMMLAARTGQERTAAELEPLFTAAGLRLDRV 333 (348)
T ss_dssp CGGGSC-HHHHHHHHHHHHHTCCTTCEEEEEECCBCSSSSCCHHHHHHHHHHHTTSCCCCBHHHHHHHHHHTTEEEEEE
T ss_pred hccCCC-HHHHHHHHHHHHHhcCCCCEEEEEEeccCCCCCcchhhhcChhhhhcCCCcCCCHHHHHHHHHHCCCceEEE
Confidence 998887 44 6899999999999999999875322211110 112345888999999998764
No 132
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.15 E-value=2.2e-10 Score=115.94 Aligned_cols=104 Identities=10% Similarity=0.037 Sum_probs=81.8
Q ss_pred CCCCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHhCCC---------cEEEEecCCCC-------CCCC
Q 039518 227 AGVFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALERGIG---------AMISALSTKQL-------PYPS 290 (617)
Q Consensus 227 ~~g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~erg~~---------~~~~~~d~~~L-------pf~d 290 (617)
.++.+|||+|||+|.++..++++... ..++++|+++.+++.|+++... +.+..+|+.++ ++++
T Consensus 35 ~~~~~VLDlG~G~G~~~l~la~~~~~-~~v~gvDi~~~~~~~a~~n~~~~~~~~l~~~v~~~~~D~~~~~~~~~~~~~~~ 113 (260)
T 2ozv_A 35 DRACRIADLGAGAGAAGMAVAARLEK-AEVTLYERSQEMAEFARRSLELPDNAAFSARIEVLEADVTLRAKARVEAGLPD 113 (260)
T ss_dssp CSCEEEEECCSSSSHHHHHHHHHCTT-EEEEEEESSHHHHHHHHHHTTSGGGTTTGGGEEEEECCTTCCHHHHHHTTCCT
T ss_pred cCCCEEEEeCChHhHHHHHHHHhCCC-CeEEEEECCHHHHHHHHHHHHhhhhCCCcceEEEEeCCHHHHhhhhhhhccCC
Confidence 45678999999999999999987543 4789999999999999986432 67888888776 3567
Q ss_pred CCeeEEEeccccccc-----------------ccchHHHHHHHHHhccCCeEEEEEeC
Q 039518 291 SSFEMVHCSRCRVDW-----------------HANDGILLKEVDRVLRPNGYFVYSAP 331 (617)
Q Consensus 291 ~sFDlV~~s~~l~h~-----------------~~d~~~~L~el~RvLrPGG~Liis~p 331 (617)
++||+|+++...... ......++.++.++|+|||.|++..+
T Consensus 114 ~~fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 171 (260)
T 2ozv_A 114 EHFHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSGGQLSLISR 171 (260)
T ss_dssp TCEEEEEECCCC---------------------CCHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred CCcCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCCCEEEEEEc
Confidence 899999997322211 12367889999999999999999875
No 133
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=99.15 E-value=1.8e-10 Score=119.31 Aligned_cols=127 Identities=10% Similarity=0.183 Sum_probs=88.0
Q ss_pred CCCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHhCCCcEEE-EecCCCCC---CCCCCeeEEEeccccc
Q 039518 228 GVFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALERGIGAMIS-ALSTKQLP---YPSSSFEMVHCSRCRV 303 (617)
Q Consensus 228 ~g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~erg~~~~~~-~~d~~~Lp---f~d~sFDlV~~s~~l~ 303 (617)
++.+|||||||||.++..|++++.. .++++|+++.|++.+.++...+... ..++..++ ++..+||+|++..+++
T Consensus 85 ~g~~vLDiGcGTG~~t~~L~~~ga~--~V~aVDvs~~mL~~a~r~~~rv~~~~~~ni~~l~~~~l~~~~fD~v~~d~sf~ 162 (291)
T 3hp7_A 85 EDMITIDIGASTGGFTDVMLQNGAK--LVYAVDVGTNQLVWKLRQDDRVRSMEQYNFRYAEPVDFTEGLPSFASIDVSFI 162 (291)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTCS--EEEEECSSSSCSCHHHHTCTTEEEECSCCGGGCCGGGCTTCCCSEEEECCSSS
T ss_pred cccEEEecCCCccHHHHHHHhCCCC--EEEEEECCHHHHHHHHHhCcccceecccCceecchhhCCCCCCCEEEEEeeHh
Confidence 4567999999999999999988643 6788899999998876654443322 22333333 3445699999876554
Q ss_pred ccccchHHHHHHHHHhccCCeEEEEEeCCCCCCCCC-------------ChhhHHHHHHHHHHcCceEEE
Q 039518 304 DWHANDGILLKEVDRVLRPNGYFVYSAPPAYRKDKD-------------YPLIWDKLVNLTTAMCWKLIA 360 (617)
Q Consensus 304 h~~~d~~~~L~el~RvLrPGG~Liis~p~~~~~~~~-------------~~~~W~~le~La~~~gw~~v~ 360 (617)
+...+|.++.|+|+|||.+++..-|....... +...-+++..+++..||.+..
T Consensus 163 ----sl~~vL~e~~rvLkpGG~lv~lvkPqfe~~~~~~~~~G~vrd~~~~~~~~~~v~~~~~~~Gf~v~~ 228 (291)
T 3hp7_A 163 ----SLNLILPALAKILVDGGQVVALVKPQFEAGREQIGKNGIVRESSIHEKVLETVTAFAVDYGFSVKG 228 (291)
T ss_dssp ----CGGGTHHHHHHHSCTTCEEEEEECGGGTSCGGGCC-CCCCCCHHHHHHHHHHHHHHHHHTTEEEEE
T ss_pred ----hHHHHHHHHHHHcCcCCEEEEEECcccccChhhcCCCCccCCHHHHHHHHHHHHHHHHHCCCEEEE
Confidence 34679999999999999999974332211110 011233477888899999776
No 134
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=99.15 E-value=2.5e-10 Score=120.11 Aligned_cols=133 Identities=17% Similarity=0.167 Sum_probs=96.4
Q ss_pred cCCCCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHh----CC--CcEEEEecCCCCCCCCCCeeEEEec
Q 039518 226 SAGVFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALER----GI--GAMISALSTKQLPYPSSSFEMVHCS 299 (617)
Q Consensus 226 ~~~g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~er----g~--~~~~~~~d~~~Lpf~d~sFDlV~~s 299 (617)
..++.+|||||||+|.++..++++.... .++++|+ +.+++.|+++ +. ++.+..+|+.+ +++. .||+|+++
T Consensus 181 ~~~~~~vLDvG~G~G~~~~~l~~~~~~~-~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~~-~~D~v~~~ 256 (360)
T 1tw3_A 181 WTNVRHVLDVGGGKGGFAAAIARRAPHV-SATVLEM-AGTVDTARSYLKDEGLSDRVDVVEGDFFE-PLPR-KADAIILS 256 (360)
T ss_dssp CTTCSEEEEETCTTSHHHHHHHHHCTTC-EEEEEEC-TTHHHHHHHHHHHTTCTTTEEEEECCTTS-CCSS-CEEEEEEE
T ss_pred CccCcEEEEeCCcCcHHHHHHHHhCCCC-EEEEecC-HHHHHHHHHHHHhcCCCCceEEEeCCCCC-CCCC-CccEEEEc
Confidence 3456789999999999999998875432 5667788 7888888764 33 47888888754 4444 49999999
Q ss_pred ccccccccc-hHHHHHHHHHhccCCeEEEEEeCC-CCCCCCCC----------------hhhHHHHHHHHHHcCceEEEE
Q 039518 300 RCRVDWHAN-DGILLKEVDRVLRPNGYFVYSAPP-AYRKDKDY----------------PLIWDKLVNLTTAMCWKLIAR 361 (617)
Q Consensus 300 ~~l~h~~~d-~~~~L~el~RvLrPGG~Liis~p~-~~~~~~~~----------------~~~W~~le~La~~~gw~~v~~ 361 (617)
.++++|.+. ...+++++.++|+|||++++.++. ........ ...-+++.+++++.||+.+..
T Consensus 257 ~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~ 336 (360)
T 1tw3_A 257 FVLLNWPDHDAVRILTRCAEALEPGGRILIHERDDLHENSFNEQFTELDLRMLVFLGGALRTREKWDGLAASAGLVVEEV 336 (360)
T ss_dssp SCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEECCBCGGGCCSHHHHHHHHHHHHHHSCCCCBHHHHHHHHHHTTEEEEEE
T ss_pred ccccCCCHHHHHHHHHHHHHhcCCCcEEEEEEEeccCCCCCcchhhhccHHHhhhcCCcCCCHHHHHHHHHHCCCeEEEE
Confidence 998888732 257999999999999999998764 21111000 011344788899999988764
Q ss_pred e
Q 039518 362 K 362 (617)
Q Consensus 362 ~ 362 (617)
.
T Consensus 337 ~ 337 (360)
T 1tw3_A 337 R 337 (360)
T ss_dssp E
T ss_pred E
Confidence 3
No 135
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=99.14 E-value=2.3e-11 Score=118.53 Aligned_cols=100 Identities=11% Similarity=0.179 Sum_probs=80.7
Q ss_pred CCCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHh----CCCcEEEEecCCCCCCCCCCeeEEEeccccc
Q 039518 228 GVFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALER----GIGAMISALSTKQLPYPSSSFEMVHCSRCRV 303 (617)
Q Consensus 228 ~g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~er----g~~~~~~~~d~~~Lpf~d~sFDlV~~s~~l~ 303 (617)
+..+|||+|||+|.++..++.....+ .+.++|+++.|++.++++ |....+.+.|.... .+.++||+|+...++|
T Consensus 49 ~~~~VLDlGCG~GplAl~l~~~~p~a-~~~A~Di~~~~leiar~~~~~~g~~~~v~~~d~~~~-~~~~~~DvVLa~k~LH 126 (200)
T 3fzg_A 49 HVSSILDFGCGFNPLALYQWNENEKI-IYHAYDIDRAEIAFLSSIIGKLKTTIKYRFLNKESD-VYKGTYDVVFLLKMLP 126 (200)
T ss_dssp CCSEEEEETCTTHHHHHHHHCSSCCC-EEEEECSCHHHHHHHHHHHHHSCCSSEEEEECCHHH-HTTSEEEEEEEETCHH
T ss_pred CCCeEEEecCCCCHHHHHHHhcCCCC-EEEEEeCCHHHHHHHHHHHHhcCCCccEEEeccccc-CCCCCcChhhHhhHHH
Confidence 35579999999999999998886666 899999999999999876 55545555665433 4568899999998777
Q ss_pred ccccchHHHHHHHHHhccCCeEEEEEe
Q 039518 304 DWHANDGILLKEVDRVLRPNGYFVYSA 330 (617)
Q Consensus 304 h~~~d~~~~L~el~RvLrPGG~Liis~ 330 (617)
+. ++....+.++.+.|+|||.++-..
T Consensus 127 lL-~~~~~al~~v~~~L~pggvfISfp 152 (200)
T 3fzg_A 127 VL-KQQDVNILDFLQLFHTQNFVISFP 152 (200)
T ss_dssp HH-HHTTCCHHHHHHTCEEEEEEEEEE
T ss_pred hh-hhhHHHHHHHHHHhCCCCEEEEeC
Confidence 77 677778889999999999877543
No 136
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.14 E-value=1.6e-10 Score=117.51 Aligned_cols=122 Identities=12% Similarity=0.128 Sum_probs=90.4
Q ss_pred CCCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHh----CC-CcEEEEecCCCCCCCCCCeeEEEecccc
Q 039518 228 GVFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALER----GI-GAMISALSTKQLPYPSSSFEMVHCSRCR 302 (617)
Q Consensus 228 ~g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~er----g~-~~~~~~~d~~~Lpf~d~sFDlV~~s~~l 302 (617)
++.+|||+|||+|.++..+++.... ..++++|+++.+++.|+++ +. ++.+..+|... ++++++||+|+++...
T Consensus 109 ~~~~vLDlG~GsG~~~~~la~~~~~-~~v~~vD~s~~~l~~a~~n~~~~~~~~v~~~~~d~~~-~~~~~~fD~Iv~npPy 186 (276)
T 2b3t_A 109 QPCRILDLGTGTGAIALALASERPD-CEIIAVDRMPDAVSLAQRNAQHLAIKNIHILQSDWFS-ALAGQQFAMIVSNPPY 186 (276)
T ss_dssp SCCEEEEETCTTSHHHHHHHHHCTT-SEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCSTTG-GGTTCCEEEEEECCCC
T ss_pred CCCEEEEecCCccHHHHHHHHhCCC-CEEEEEECCHHHHHHHHHHHHHcCCCceEEEEcchhh-hcccCCccEEEECCCC
Confidence 4557999999999999999865322 2688899999999998876 44 47777777755 2446789999997332
Q ss_pred cc-------------cc-----------cchHHHHHHHHHhccCCeEEEEEeCCCCCCCCCChhhHHHHHHHHHHcCceE
Q 039518 303 VD-------------WH-----------ANDGILLKEVDRVLRPNGYFVYSAPPAYRKDKDYPLIWDKLVNLTTAMCWKL 358 (617)
Q Consensus 303 ~h-------------~~-----------~d~~~~L~el~RvLrPGG~Liis~p~~~~~~~~~~~~W~~le~La~~~gw~~ 358 (617)
+. .+ .+...++.++.++|+|||++++..+.. . -+.+.+++++.||+.
T Consensus 187 ~~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~LkpgG~l~~~~~~~------~---~~~~~~~l~~~Gf~~ 257 (276)
T 2b3t_A 187 IDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGWQ------Q---GEAVRQAFILAGYHD 257 (276)
T ss_dssp BCTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEEEEEEEEEECCSS------C---HHHHHHHHHHTTCTT
T ss_pred CCccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcCCCCEEEEEECch------H---HHHHHHHHHHCCCcE
Confidence 21 11 234678999999999999999975421 1 355888888999976
Q ss_pred EE
Q 039518 359 IA 360 (617)
Q Consensus 359 v~ 360 (617)
+.
T Consensus 258 v~ 259 (276)
T 2b3t_A 258 VE 259 (276)
T ss_dssp CC
T ss_pred EE
Confidence 54
No 137
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=99.14 E-value=1.5e-10 Score=111.50 Aligned_cols=114 Identities=14% Similarity=0.110 Sum_probs=86.2
Q ss_pred CCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHh----CC-CcEEEEecCCCCCCCCCCeeEEEeccccc
Q 039518 229 VFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALER----GI-GAMISALSTKQLPYPSSSFEMVHCSRCRV 303 (617)
Q Consensus 229 g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~er----g~-~~~~~~~d~~~Lpf~d~sFDlV~~s~~l~ 303 (617)
+.+|||+|||+|.++..++..... ..++++|+++.+++.|+++ +. ++.+..+|+..++ ++++||+|++.. +
T Consensus 66 ~~~vLDiG~G~G~~~~~l~~~~~~-~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~-~~~~~D~i~~~~-~- 141 (207)
T 1jsx_A 66 GERFIDVGTGPGLPGIPLSIVRPE-AHFTLLDSLGKRVRFLRQVQHELKLENIEPVQSRVEEFP-SEPPFDGVISRA-F- 141 (207)
T ss_dssp SSEEEEETCTTTTTHHHHHHHCTT-SEEEEEESCHHHHHHHHHHHHHTTCSSEEEEECCTTTSC-CCSCEEEEECSC-S-
T ss_pred CCeEEEECCCCCHHHHHHHHHCCC-CEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEecchhhCC-ccCCcCEEEEec-c-
Confidence 567999999999999999876322 2678899999999988875 44 3778888887766 467899999753 2
Q ss_pred ccccchHHHHHHHHHhccCCeEEEEEeCCCCCCCCCChhhHHHHHHHHHHcCceEEE
Q 039518 304 DWHANDGILLKEVDRVLRPNGYFVYSAPPAYRKDKDYPLIWDKLVNLTTAMCWKLIA 360 (617)
Q Consensus 304 h~~~d~~~~L~el~RvLrPGG~Liis~p~~~~~~~~~~~~W~~le~La~~~gw~~v~ 360 (617)
.+...++.++.++|+|||++++..... . -+++..+.+ ||+.+.
T Consensus 142 ---~~~~~~l~~~~~~L~~gG~l~~~~~~~------~---~~~~~~~~~--g~~~~~ 184 (207)
T 1jsx_A 142 ---ASLNDMVSWCHHLPGEQGRFYALKGQM------P---EDEIALLPE--EYQVES 184 (207)
T ss_dssp ---SSHHHHHHHHTTSEEEEEEEEEEESSC------C---HHHHHTSCT--TEEEEE
T ss_pred ---CCHHHHHHHHHHhcCCCcEEEEEeCCC------c---hHHHHHHhc--CCceee
Confidence 367889999999999999999975321 1 233444444 888765
No 138
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=99.14 E-value=9.1e-11 Score=115.18 Aligned_cols=96 Identities=10% Similarity=0.055 Sum_probs=78.5
Q ss_pred CCCCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHhCC---CcEEEEecCCCCCCCCCCeeEEEeccccc
Q 039518 227 AGVFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALERGI---GAMISALSTKQLPYPSSSFEMVHCSRCRV 303 (617)
Q Consensus 227 ~~g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~erg~---~~~~~~~d~~~Lpf~d~sFDlV~~s~~l~ 303 (617)
.++.+|||||||+|.++..+++.+. .++++|+++.+++.|+++.. ++.+..+|.......+++||+|++..+++
T Consensus 69 ~~~~~vLdiG~G~G~~~~~l~~~~~---~v~~vD~~~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~~~~ 145 (231)
T 1vbf_A 69 HKGQKVLEIGTGIGYYTALIAEIVD---KVVSVEINEKMYNYASKLLSYYNNIKLILGDGTLGYEEEKPYDRVVVWATAP 145 (231)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHSS---EEEEEESCHHHHHHHHHHHTTCSSEEEEESCGGGCCGGGCCEEEEEESSBBS
T ss_pred CCCCEEEEEcCCCCHHHHHHHHHcC---EEEEEeCCHHHHHHHHHHHhhcCCeEEEECCcccccccCCCccEEEECCcHH
Confidence 4566899999999999999998763 77888999999999998732 57788888766333467899999998777
Q ss_pred ccccchHHHHHHHHHhccCCeEEEEEeCC
Q 039518 304 DWHANDGILLKEVDRVLRPNGYFVYSAPP 332 (617)
Q Consensus 304 h~~~d~~~~L~el~RvLrPGG~Liis~p~ 332 (617)
++. .++.++|+|||.++++.++
T Consensus 146 ~~~-------~~~~~~L~pgG~l~~~~~~ 167 (231)
T 1vbf_A 146 TLL-------CKPYEQLKEGGIMILPIGV 167 (231)
T ss_dssp SCC-------HHHHHTEEEEEEEEEEECS
T ss_pred HHH-------HHHHHHcCCCcEEEEEEcC
Confidence 654 3689999999999998763
No 139
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=99.14 E-value=1.2e-10 Score=122.54 Aligned_cols=128 Identities=11% Similarity=0.069 Sum_probs=95.8
Q ss_pred CCCCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHhCCCcEEEEecCCCCCCCCCCeeEEEecccccccc
Q 039518 227 AGVFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALERGIGAMISALSTKQLPYPSSSFEMVHCSRCRVDWH 306 (617)
Q Consensus 227 ~~g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~erg~~~~~~~~d~~~Lpf~d~sFDlV~~s~~l~h~~ 306 (617)
.++.+|||||||+|.++..++++.... .++++|+ +.+++.|++. ..+.+..+|+.. ++++ ||+|+++.++++|.
T Consensus 187 ~~~~~vlDvG~G~G~~~~~l~~~~p~~-~~~~~D~-~~~~~~a~~~-~~v~~~~~d~~~-~~p~--~D~v~~~~~lh~~~ 260 (352)
T 1fp2_A 187 DGLESIVDVGGGTGTTAKIICETFPKL-KCIVFDR-PQVVENLSGS-NNLTYVGGDMFT-SIPN--ADAVLLKYILHNWT 260 (352)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTC-EEEEEEC-HHHHTTCCCB-TTEEEEECCTTT-CCCC--CSEEEEESCGGGSC
T ss_pred ccCceEEEeCCCccHHHHHHHHHCCCC-eEEEeeC-HHHHhhcccC-CCcEEEeccccC-CCCC--ccEEEeehhhccCC
Confidence 456789999999999999999874432 6788899 8888887654 247888888755 5553 99999999999887
Q ss_pred cchH--HHHHHHHHhccC---CeEEEEEeCCCCCCCCC-------------------ChhhHHHHHHHHHHcCceEEEE
Q 039518 307 ANDG--ILLKEVDRVLRP---NGYFVYSAPPAYRKDKD-------------------YPLIWDKLVNLTTAMCWKLIAR 361 (617)
Q Consensus 307 ~d~~--~~L~el~RvLrP---GG~Liis~p~~~~~~~~-------------------~~~~W~~le~La~~~gw~~v~~ 361 (617)
+.. .+|+++.++||| ||++++.++........ ....-+++.+++++.||+.+..
T Consensus 261 -d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~t~~e~~~ll~~aGf~~~~~ 338 (352)
T 1fp2_A 261 -DKDCLRILKKCKEAVTNDGKRGKVTIIDMVIDKKKDENQVTQIKLLMDVNMACLNGKERNEEEWKKLFIEAGFQHYKI 338 (352)
T ss_dssp -HHHHHHHHHHHHHHHSGGGCCCEEEEEECEECTTTSCHHHHHHHHHHHHHGGGGTCCCEEHHHHHHHHHHTTCCEEEE
T ss_pred -HHHHHHHHHHHHHhCCCCCCCcEEEEEEeecCCCCCccchhhhHhhccHHHHhccCCCCCHHHHHHHHHHCCCCeeEE
Confidence 555 899999999999 99999987532211100 0011345788888999987764
No 140
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=99.13 E-value=7.6e-12 Score=131.78 Aligned_cols=100 Identities=19% Similarity=0.181 Sum_probs=80.3
Q ss_pred CCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHh----CCCcEEEEecCCCCCCCCCCeeEEEecccccc
Q 039518 229 VFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALER----GIGAMISALSTKQLPYPSSSFEMVHCSRCRVD 304 (617)
Q Consensus 229 g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~er----g~~~~~~~~d~~~Lpf~d~sFDlV~~s~~l~h 304 (617)
+.+|||+|||+|.++..+++++... .++++|+++.+++.|+++ +....+...|.... .+++||+|+++..+++
T Consensus 197 ~~~VLDlGcG~G~~~~~la~~~~~~-~v~~vD~s~~~l~~a~~~~~~~~~~~~~~~~d~~~~--~~~~fD~Iv~~~~~~~ 273 (343)
T 2pjd_A 197 KGKVLDVGCGAGVLSVAFARHSPKI-RLTLCDVSAPAVEASRATLAANGVEGEVFASNVFSE--VKGRFDMIISNPPFHD 273 (343)
T ss_dssp CSBCCBTTCTTSHHHHHHHHHCTTC-BCEEEESBHHHHHHHHHHHHHTTCCCEEEECSTTTT--CCSCEEEEEECCCCCS
T ss_pred CCeEEEecCccCHHHHHHHHHCCCC-EEEEEECCHHHHHHHHHHHHHhCCCCEEEEcccccc--ccCCeeEEEECCCccc
Confidence 3469999999999999999876433 678899999999988875 55667777776544 4678999999876654
Q ss_pred c----ccchHHHHHHHHHhccCCeEEEEEeC
Q 039518 305 W----HANDGILLKEVDRVLRPNGYFVYSAP 331 (617)
Q Consensus 305 ~----~~d~~~~L~el~RvLrPGG~Liis~p 331 (617)
. ..+...++.++.++|||||.+++..+
T Consensus 274 g~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 304 (343)
T 2pjd_A 274 GMQTSLDAAQTLIRGAVRHLNSGGELRIVAN 304 (343)
T ss_dssp SSHHHHHHHHHHHHHHGGGEEEEEEEEEEEE
T ss_pred CccCCHHHHHHHHHHHHHhCCCCcEEEEEEc
Confidence 1 23567899999999999999999875
No 141
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=99.13 E-value=2.2e-10 Score=121.65 Aligned_cols=130 Identities=17% Similarity=0.084 Sum_probs=97.0
Q ss_pred CCCCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHhCCCcEEEEecCCCCCCCCCCeeEEEecccccccc
Q 039518 227 AGVFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALERGIGAMISALSTKQLPYPSSSFEMVHCSRCRVDWH 306 (617)
Q Consensus 227 ~~g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~erg~~~~~~~~d~~~Lpf~d~sFDlV~~s~~l~h~~ 306 (617)
.+..+|||||||+|.++..++++.... .++..|+ +.+++.|+++ .++.+..+|+.. |++++ |+|++..++|+|.
T Consensus 200 ~~~~~vlDvG~G~G~~~~~l~~~~p~~-~~~~~D~-~~~~~~a~~~-~~v~~~~~D~~~-~~p~~--D~v~~~~vlh~~~ 273 (364)
T 3p9c_A 200 EGLGTLVDVGGGVGATVAAIAAHYPTI-KGVNFDL-PHVISEAPQF-PGVTHVGGDMFK-EVPSG--DTILMKWILHDWS 273 (364)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTC-EEEEEEC-HHHHTTCCCC-TTEEEEECCTTT-CCCCC--SEEEEESCGGGSC
T ss_pred cCCCEEEEeCCCCCHHHHHHHHHCCCC-eEEEecC-HHHHHhhhhc-CCeEEEeCCcCC-CCCCC--CEEEehHHhccCC
Confidence 456789999999999999999875433 5677898 7777776653 468899999877 77765 9999999999987
Q ss_pred -cchHHHHHHHHHhccCCeEEEEEeCCCCCCCCCC---------------------hhhHHHHHHHHHHcCceEEEEe
Q 039518 307 -ANDGILLKEVDRVLRPNGYFVYSAPPAYRKDKDY---------------------PLIWDKLVNLTTAMCWKLIARK 362 (617)
Q Consensus 307 -~d~~~~L~el~RvLrPGG~Liis~p~~~~~~~~~---------------------~~~W~~le~La~~~gw~~v~~~ 362 (617)
++...+|++++++|||||+++|.+.......... ...-+++.++++++||+.+...
T Consensus 274 d~~~~~~L~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~~m~~~~~~g~~rt~~e~~~ll~~AGF~~v~~~ 351 (364)
T 3p9c_A 274 DQHCATLLKNCYDALPAHGKVVLVQCILPVNPEANPSSQGVFHVDMIMLAHNPGGRERYEREFQALARGAGFTGVKST 351 (364)
T ss_dssp HHHHHHHHHHHHHHSCTTCEEEEEECCBCSSCCSSHHHHHHHHHHHHHHHHCSSCCCCBHHHHHHHHHHTTCCEEEEE
T ss_pred HHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCcchhhhhHHHhHHHHHhcccCCccCCHHHHHHHHHHCCCceEEEE
Confidence 3356799999999999999999875322111100 0112347889999999988743
No 142
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.13 E-value=2.3e-10 Score=114.18 Aligned_cols=120 Identities=14% Similarity=0.174 Sum_probs=93.1
Q ss_pred cCCCCeEEEECCCCcHHHHHhccC-CCcEEEeeecCCcHHHHHHHHHh----CCC--cEEEEecCCCCCCCCCCeeEEEe
Q 039518 226 SAGVFQVLDVGCGVASFSAFLLPL-DIQTMSFAPKDGHENQIQFALER----GIG--AMISALSTKQLPYPSSSFEMVHC 298 (617)
Q Consensus 226 ~~~g~rVLDIGCGtG~~a~~La~~-gv~~v~v~~iDis~~~lq~A~er----g~~--~~~~~~d~~~Lpf~d~sFDlV~~ 298 (617)
..++.+|||+|||+|.++..+++. +.. ..+.++|+++.+++.|+++ +.+ +.+..+|+.+. +++++||+|++
T Consensus 91 ~~~~~~vldiG~G~G~~~~~l~~~~~~~-~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~~~~~~D~v~~ 168 (255)
T 3mb5_A 91 ISPGDFIVEAGVGSGALTLFLANIVGPE-GRVVSYEIREDFAKLAWENIKWAGFDDRVTIKLKDIYEG-IEEENVDHVIL 168 (255)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTT-SEEEEECSCHHHHHHHHHHHHHHTCTTTEEEECSCGGGC-CCCCSEEEEEE
T ss_pred CCCCCEEEEecCCchHHHHHHHHHhCCC-eEEEEEecCHHHHHHHHHHHHHcCCCCceEEEECchhhc-cCCCCcCEEEE
Confidence 356778999999999999999987 422 2678889999999999876 443 77888887644 67788999997
Q ss_pred cccccccccchHHHHHHHHHhccCCeEEEEEeCCCCCCCCCChhhHHHHHHHHHHcC--ceEEEE
Q 039518 299 SRCRVDWHANDGILLKEVDRVLRPNGYFVYSAPPAYRKDKDYPLIWDKLVNLTTAMC--WKLIAR 361 (617)
Q Consensus 299 s~~l~h~~~d~~~~L~el~RvLrPGG~Liis~p~~~~~~~~~~~~W~~le~La~~~g--w~~v~~ 361 (617)
. . .++..++.++.++|+|||.+++..+.. ....++.+.+++.| |..+..
T Consensus 169 ~-----~-~~~~~~l~~~~~~L~~gG~l~~~~~~~--------~~~~~~~~~l~~~g~~f~~~~~ 219 (255)
T 3mb5_A 169 D-----L-PQPERVVEHAAKALKPGGFFVAYTPCS--------NQVMRLHEKLREFKDYFMKPRT 219 (255)
T ss_dssp C-----S-SCGGGGHHHHHHHEEEEEEEEEEESSH--------HHHHHHHHHHHHTGGGBSCCEE
T ss_pred C-----C-CCHHHHHHHHHHHcCCCCEEEEEECCH--------HHHHHHHHHHHHcCCCccccEE
Confidence 4 2 366789999999999999999987632 12445777778888 876653
No 143
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.13 E-value=7e-11 Score=109.71 Aligned_cols=119 Identities=15% Similarity=0.165 Sum_probs=85.7
Q ss_pred CChhHHHHHHHhhhhhccCCcccCCCCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHh----CCCcEEE
Q 039518 204 HGAPEYIQRLGNMMTNETGNLRSAGVFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALER----GIGAMIS 279 (617)
Q Consensus 204 ~~a~~Y~~~L~~~L~~~~~~lr~~~g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~er----g~~~~~~ 279 (617)
.......+.+.+.+... ..++.+|||+|||+|.++..+++++.. ++++|+++.+++.|+++ +.++.+.
T Consensus 22 ~~~~~~~~~~~~~~~~~-----~~~~~~vLD~GcG~G~~~~~l~~~~~~---v~~vD~~~~~~~~a~~~~~~~~~~~~~~ 93 (171)
T 1ws6_A 22 PSPVRLRKALFDYLRLR-----YPRRGRFLDPFAGSGAVGLEAASEGWE---AVLVEKDPEAVRLLKENVRRTGLGARVV 93 (171)
T ss_dssp CCCHHHHHHHHHHHHHH-----CTTCCEEEEETCSSCHHHHHHHHTTCE---EEEECCCHHHHHHHHHHHHHHTCCCEEE
T ss_pred CCHHHHHHHHHHHHHhh-----ccCCCeEEEeCCCcCHHHHHHHHCCCe---EEEEeCCHHHHHHHHHHHHHcCCceEEE
Confidence 34445555555555321 113456999999999999999998764 78899999999998875 4467788
Q ss_pred EecCCC-CCC---CCCCeeEEEecccccccccchHHHHHHHH--HhccCCeEEEEEeCCC
Q 039518 280 ALSTKQ-LPY---PSSSFEMVHCSRCRVDWHANDGILLKEVD--RVLRPNGYFVYSAPPA 333 (617)
Q Consensus 280 ~~d~~~-Lpf---~d~sFDlV~~s~~l~h~~~d~~~~L~el~--RvLrPGG~Liis~p~~ 333 (617)
.+|+.+ ++. ..++||+|+++..++ .+....+..+. ++|+|||.++++.+..
T Consensus 94 ~~d~~~~~~~~~~~~~~~D~i~~~~~~~---~~~~~~~~~~~~~~~L~~gG~~~~~~~~~ 150 (171)
T 1ws6_A 94 ALPVEVFLPEAKAQGERFTVAFMAPPYA---MDLAALFGELLASGLVEAGGLYVLQHPKD 150 (171)
T ss_dssp CSCHHHHHHHHHHTTCCEEEEEECCCTT---SCTTHHHHHHHHHTCEEEEEEEEEEEETT
T ss_pred eccHHHHHHhhhccCCceEEEEECCCCc---hhHHHHHHHHHhhcccCCCcEEEEEeCCc
Confidence 877655 221 134799999886543 34556677777 9999999999988643
No 144
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.12 E-value=1.6e-10 Score=109.04 Aligned_cols=120 Identities=9% Similarity=0.006 Sum_probs=87.0
Q ss_pred CChhHHHHHHHhhhhhccCCcccCCCCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHh----CC--CcE
Q 039518 204 HGAPEYIQRLGNMMTNETGNLRSAGVFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALER----GI--GAM 277 (617)
Q Consensus 204 ~~a~~Y~~~L~~~L~~~~~~lr~~~g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~er----g~--~~~ 277 (617)
.....+.+.+.+.+.. ..++.+|||+|||+|.++..+++++. ..++++|+++.+++.|+++ +. ++.
T Consensus 26 p~~~~~~~~~~~~l~~------~~~~~~vLD~GcG~G~~~~~~~~~~~--~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~ 97 (187)
T 2fhp_A 26 PTTDKVKESIFNMIGP------YFDGGMALDLYSGSGGLAIEAVSRGM--DKSICIEKNFAALKVIKENIAITKEPEKFE 97 (187)
T ss_dssp CCCHHHHHHHHHHHCS------CCSSCEEEETTCTTCHHHHHHHHTTC--SEEEEEESCHHHHHHHHHHHHHHTCGGGEE
T ss_pred cCHHHHHHHHHHHHHh------hcCCCCEEEeCCccCHHHHHHHHcCC--CEEEEEECCHHHHHHHHHHHHHhCCCcceE
Confidence 3445566666655521 13456799999999999998888653 2688899999999988875 43 477
Q ss_pred EEEecCCCC----CCCCCCeeEEEecccccccccchHHHHHHH--HHhccCCeEEEEEeCCC
Q 039518 278 ISALSTKQL----PYPSSSFEMVHCSRCRVDWHANDGILLKEV--DRVLRPNGYFVYSAPPA 333 (617)
Q Consensus 278 ~~~~d~~~L----pf~d~sFDlV~~s~~l~h~~~d~~~~L~el--~RvLrPGG~Liis~p~~ 333 (617)
+..+|+.+. ++.+++||+|+++...+ ..+....+..+ .++|+|||.+++..+..
T Consensus 98 ~~~~d~~~~~~~~~~~~~~fD~i~~~~~~~--~~~~~~~~~~l~~~~~L~~gG~l~~~~~~~ 157 (187)
T 2fhp_A 98 VRKMDANRALEQFYEEKLQFDLVLLDPPYA--KQEIVSQLEKMLERQLLTNEAVIVCETDKT 157 (187)
T ss_dssp EEESCHHHHHHHHHHTTCCEEEEEECCCGG--GCCHHHHHHHHHHTTCEEEEEEEEEEEETT
T ss_pred EEECcHHHHHHHHHhcCCCCCEEEECCCCC--chhHHHHHHHHHHhcccCCCCEEEEEeCCc
Confidence 888876542 22367899999876532 23566777777 99999999999987643
No 145
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.12 E-value=1.1e-11 Score=119.00 Aligned_cols=123 Identities=11% Similarity=-0.037 Sum_probs=76.6
Q ss_pred CCCCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHhCC----CcEEEEecCCCCCCCC-----CCeeEEE
Q 039518 227 AGVFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALERGI----GAMISALSTKQLPYPS-----SSFEMVH 297 (617)
Q Consensus 227 ~~g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~erg~----~~~~~~~d~~~Lpf~d-----~sFDlV~ 297 (617)
.++.+|||+|||+|.++..+++.... ..++++|+++.+++.|+++.. ++.+..+|+.+ ++++ ++||+|+
T Consensus 29 ~~~~~vLDiG~G~G~~~~~l~~~~~~-~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~-~~~~~~~~~~~fD~i~ 106 (215)
T 4dzr_A 29 PSGTRVIDVGTGSGCIAVSIALACPG-VSVTAVDLSMDALAVARRNAERFGAVVDWAAADGIE-WLIERAERGRPWHAIV 106 (215)
T ss_dssp CTTEEEEEEESSBCHHHHHHHHHCTT-EEEEEEECC-------------------CCHHHHHH-HHHHHHHTTCCBSEEE
T ss_pred CCCCEEEEecCCHhHHHHHHHHhCCC-CeEEEEECCHHHHHHHHHHHHHhCCceEEEEcchHh-hhhhhhhccCcccEEE
Confidence 35667999999999999999988543 378899999999999887632 45556666655 5554 8999999
Q ss_pred ecccccccc------cc-------------------hHHHHHHHHHhccCCeE-EEEEeCCCCCCCCCChhhHHHHHHHH
Q 039518 298 CSRCRVDWH------AN-------------------DGILLKEVDRVLRPNGY-FVYSAPPAYRKDKDYPLIWDKLVNLT 351 (617)
Q Consensus 298 ~s~~l~h~~------~d-------------------~~~~L~el~RvLrPGG~-Liis~p~~~~~~~~~~~~W~~le~La 351 (617)
++...++.. .+ ...++.++.++|||||+ +++..+. .. .+.+.+++
T Consensus 107 ~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~-------~~--~~~~~~~l 177 (215)
T 4dzr_A 107 SNPPYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLARGRAGVFLEVGH-------NQ--ADEVARLF 177 (215)
T ss_dssp ECCCCCC------------------------CTTHHHHHHHTCCGGGBCSSSEEEEEECTT-------SC--HHHHHHHT
T ss_pred ECCCCCCCccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHHhcCCCeEEEEEECC-------cc--HHHHHHHH
Confidence 964332211 00 16788999999999999 5554431 11 45577888
Q ss_pred H--HcCceEEE
Q 039518 352 T--AMCWKLIA 360 (617)
Q Consensus 352 ~--~~gw~~v~ 360 (617)
+ ..||..+.
T Consensus 178 ~~~~~gf~~~~ 188 (215)
T 4dzr_A 178 APWRERGFRVR 188 (215)
T ss_dssp GGGGGGTEECC
T ss_pred HHhhcCCceEE
Confidence 8 88887655
No 146
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=99.12 E-value=2e-10 Score=121.10 Aligned_cols=99 Identities=16% Similarity=0.145 Sum_probs=79.2
Q ss_pred CCCCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHh----C--CCcEEEEecCCCCCCCCCCeeEEEecc
Q 039518 227 AGVFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALER----G--IGAMISALSTKQLPYPSSSFEMVHCSR 300 (617)
Q Consensus 227 ~~g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~er----g--~~~~~~~~d~~~Lpf~d~sFDlV~~s~ 300 (617)
.++.+|||||||+|.++..+++.+. ..+.++|+++ +++.|+++ + .++.+..+|+.++++++++||+|++..
T Consensus 63 ~~~~~VLDiGcGtG~ls~~la~~g~--~~v~gvD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~Ivs~~ 139 (340)
T 2fyt_A 63 FKDKVVLDVGCGTGILSMFAAKAGA--KKVLGVDQSE-ILYQAMDIIRLNKLEDTITLIKGKIEEVHLPVEKVDVIISEW 139 (340)
T ss_dssp TTTCEEEEETCTTSHHHHHHHHTTC--SEEEEEESST-HHHHHHHHHHHTTCTTTEEEEESCTTTSCCSCSCEEEEEECC
T ss_pred cCCCEEEEeeccCcHHHHHHHHcCC--CEEEEEChHH-HHHHHHHHHHHcCCCCcEEEEEeeHHHhcCCCCcEEEEEEcC
Confidence 4566799999999999999998864 2678889996 88887765 3 357888999999998888999999875
Q ss_pred cc--cccccchHHHHHHHHHhccCCeEEEE
Q 039518 301 CR--VDWHANDGILLKEVDRVLRPNGYFVY 328 (617)
Q Consensus 301 ~l--~h~~~d~~~~L~el~RvLrPGG~Lii 328 (617)
.. .+...+...++.++.|+|||||.++.
T Consensus 140 ~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 169 (340)
T 2fyt_A 140 MGYFLLFESMLDSVLYAKNKYLAKGGSVYP 169 (340)
T ss_dssp CBTTBTTTCHHHHHHHHHHHHEEEEEEEES
T ss_pred chhhccCHHHHHHHHHHHHhhcCCCcEEEc
Confidence 21 22234577899999999999999973
No 147
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=99.10 E-value=2.3e-10 Score=122.22 Aligned_cols=101 Identities=15% Similarity=0.148 Sum_probs=80.6
Q ss_pred cCCCCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHh----CCC--cEEEEecCCCCCCCCCCeeEEEec
Q 039518 226 SAGVFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALER----GIG--AMISALSTKQLPYPSSSFEMVHCS 299 (617)
Q Consensus 226 ~~~g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~er----g~~--~~~~~~d~~~Lpf~d~sFDlV~~s 299 (617)
..++.+|||||||+|.++..+++++.. .++++|++ .+++.|+++ +.. +.+..+|+++++++ ++||+|++.
T Consensus 61 ~~~~~~VLDlGcGtG~ls~~la~~g~~--~V~gvD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~-~~~D~Iv~~ 136 (376)
T 3r0q_C 61 HFEGKTVLDVGTGSGILAIWSAQAGAR--KVYAVEAT-KMADHARALVKANNLDHIVEVIEGSVEDISLP-EKVDVIISE 136 (376)
T ss_dssp TTTTCEEEEESCTTTHHHHHHHHTTCS--EEEEEESS-TTHHHHHHHHHHTTCTTTEEEEESCGGGCCCS-SCEEEEEEC
T ss_pred cCCCCEEEEeccCcCHHHHHHHhcCCC--EEEEEccH-HHHHHHHHHHHHcCCCCeEEEEECchhhcCcC-CcceEEEEc
Confidence 346678999999999999999998753 67788999 888887765 433 78899999998877 889999986
Q ss_pred ccccccc--cchHHHHHHHHHhccCCeEEEEEe
Q 039518 300 RCRVDWH--ANDGILLKEVDRVLRPNGYFVYSA 330 (617)
Q Consensus 300 ~~l~h~~--~d~~~~L~el~RvLrPGG~Liis~ 330 (617)
...+... .....++.++.++|||||.++++.
T Consensus 137 ~~~~~l~~e~~~~~~l~~~~~~LkpgG~li~~~ 169 (376)
T 3r0q_C 137 WMGYFLLRESMFDSVISARDRWLKPTGVMYPSH 169 (376)
T ss_dssp CCBTTBTTTCTHHHHHHHHHHHEEEEEEEESSE
T ss_pred ChhhcccchHHHHHHHHHHHhhCCCCeEEEEec
Confidence 4222222 457789999999999999998754
No 148
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.10 E-value=5.4e-11 Score=127.32 Aligned_cols=134 Identities=16% Similarity=0.093 Sum_probs=92.0
Q ss_pred CCCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHh----CC----CcEEEEecCCCCCCCCCCeeEEEec
Q 039518 228 GVFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALER----GI----GAMISALSTKQLPYPSSSFEMVHCS 299 (617)
Q Consensus 228 ~g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~er----g~----~~~~~~~d~~~Lpf~d~sFDlV~~s 299 (617)
++.+|||+|||+|.++..+++++.. ..++++|+++.+++.|+++ ++ ++.+...|+.. ++++++||+|+|+
T Consensus 222 ~~~~VLDlGcG~G~~s~~la~~~p~-~~V~gvD~s~~al~~Ar~n~~~ngl~~~~~v~~~~~D~~~-~~~~~~fD~Ii~n 299 (375)
T 4dcm_A 222 LEGEIVDLGCGNGVIGLTLLDKNPQ-AKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALS-GVEPFRFNAVLCN 299 (375)
T ss_dssp CCSEEEEETCTTCHHHHHHHHHCTT-CEEEEEESCHHHHHHHHHHHHHHCGGGGGGEEEEECSTTT-TCCTTCEEEEEEC
T ss_pred CCCeEEEEeCcchHHHHHHHHHCCC-CEEEEEECcHHHHHHHHHHHHHcCCCcCceEEEEechhhc-cCCCCCeeEEEEC
Confidence 3467999999999999999988532 2788899999999988875 32 36668888765 5677899999998
Q ss_pred ccccccc---c-chHHHHHHHHHhccCCeEEEEEeCCCCCCCCCChhhHHHHHHHHHHcCceEEEEeeeeEEEeecc
Q 039518 300 RCRVDWH---A-NDGILLKEVDRVLRPNGYFVYSAPPAYRKDKDYPLIWDKLVNLTTAMCWKLIARKIQTAIWIKEE 372 (617)
Q Consensus 300 ~~l~h~~---~-d~~~~L~el~RvLrPGG~Liis~p~~~~~~~~~~~~W~~le~La~~~gw~~v~~~~~~~IwqKp~ 372 (617)
..+++.. . ....++.++.++|+|||.++++.+... . .-..++++.. ..+.+.......|++...
T Consensus 300 ppfh~~~~~~~~~~~~~l~~~~~~LkpgG~l~iv~n~~~------~-~~~~l~~~fg--~~~~~a~~~~F~V~~~~~ 367 (375)
T 4dcm_A 300 PPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHL------D-YFHKLKKIFG--NCTTIATNNKFVVLKAVK 367 (375)
T ss_dssp CCC-------CCHHHHHHHHHHHHEEEEEEEEEEEETTS------C-HHHHHHHHHS--CCEEEEECSSEEEEEEEC
T ss_pred CCcccCcccCHHHHHHHHHHHHHhCCCCcEEEEEEECCc------C-HHHHHHHhcC--CEEEEeeCCCEEEEEEcC
Confidence 7665421 1 124689999999999999999874221 1 0112333322 356666666666655443
No 149
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=99.10 E-value=2e-10 Score=117.52 Aligned_cols=103 Identities=10% Similarity=0.027 Sum_probs=81.0
Q ss_pred CCeEEEECCCC---cHHHHHhccCCCcEEEeeecCCcHHHHHHHHHhC---CCcEEEEecCCCCC-----------CCCC
Q 039518 229 VFQVLDVGCGV---ASFSAFLLPLDIQTMSFAPKDGHENQIQFALERG---IGAMISALSTKQLP-----------YPSS 291 (617)
Q Consensus 229 g~rVLDIGCGt---G~~a~~La~~gv~~v~v~~iDis~~~lq~A~erg---~~~~~~~~d~~~Lp-----------f~d~ 291 (617)
..+|||||||+ |.++..+.+.... ..++++|+++.+++.|+++. ..+.+..+|+.+.+ ++..
T Consensus 78 ~~~vLDlGcG~pt~G~~~~~~~~~~p~-~~v~~vD~sp~~l~~Ar~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~d~~ 156 (274)
T 2qe6_A 78 ISQFLDLGSGLPTVQNTHEVAQSVNPD-ARVVYVDIDPMVLTHGRALLAKDPNTAVFTADVRDPEYILNHPDVRRMIDFS 156 (274)
T ss_dssp CCEEEEETCCSCCSSCHHHHHHHHCTT-CEEEEEESSHHHHHHHHHHHTTCTTEEEEECCTTCHHHHHHSHHHHHHCCTT
T ss_pred CCEEEEECCCCCCCChHHHHHHHhCCC-CEEEEEECChHHHHHHHHhcCCCCCeEEEEeeCCCchhhhccchhhccCCCC
Confidence 35799999999 9887766654332 27888999999999998863 35788888876421 2335
Q ss_pred CeeEEEeccccccccc-chHHHHHHHHHhccCCeEEEEEeCC
Q 039518 292 SFEMVHCSRCRVDWHA-NDGILLKEVDRVLRPNGYFVYSAPP 332 (617)
Q Consensus 292 sFDlV~~s~~l~h~~~-d~~~~L~el~RvLrPGG~Liis~p~ 332 (617)
+||+|+++.+++++.+ ++..+|+++.++|+|||+|+++...
T Consensus 157 ~~d~v~~~~vlh~~~d~~~~~~l~~~~~~L~pGG~l~i~~~~ 198 (274)
T 2qe6_A 157 RPAAIMLVGMLHYLSPDVVDRVVGAYRDALAPGSYLFMTSLV 198 (274)
T ss_dssp SCCEEEETTTGGGSCTTTHHHHHHHHHHHSCTTCEEEEEEEB
T ss_pred CCEEEEEechhhhCCcHHHHHHHHHHHHhCCCCcEEEEEEec
Confidence 8999999988877763 3789999999999999999999754
No 150
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.09 E-value=1.8e-10 Score=111.98 Aligned_cols=116 Identities=10% Similarity=-0.024 Sum_probs=85.7
Q ss_pred hHHHHHHHhhhhhccCCcccCCCCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHh----CC-CcEEEEe
Q 039518 207 PEYIQRLGNMMTNETGNLRSAGVFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALER----GI-GAMISAL 281 (617)
Q Consensus 207 ~~Y~~~L~~~L~~~~~~lr~~~g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~er----g~-~~~~~~~ 281 (617)
....+.+.+.+... .++.+|||+|||+|.++..+++++.. .++++|+++.+++.|+++ +. ++.+..+
T Consensus 39 ~~~~~~l~~~l~~~------~~~~~vLDlgcG~G~~~~~l~~~~~~--~V~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~ 110 (202)
T 2fpo_A 39 DRVRETLFNWLAPV------IVDAQCLDCFAGSGALGLEALSRYAA--GATLIEMDRAVSQQLIKNLATLKAGNARVVNS 110 (202)
T ss_dssp HHHHHHHHHHHHHH------HTTCEEEETTCTTCHHHHHHHHTTCS--EEEEECSCHHHHHHHHHHHHHTTCCSEEEECS
T ss_pred HHHHHHHHHHHHhh------cCCCeEEEeCCCcCHHHHHHHhcCCC--EEEEEECCHHHHHHHHHHHHHcCCCcEEEEEC
Confidence 34445555555321 13457999999999999988877653 688899999999999875 33 5788888
Q ss_pred cCCC-CCCCCCCeeEEEecccccccccchHHHHHHHHH--hccCCeEEEEEeCC
Q 039518 282 STKQ-LPYPSSSFEMVHCSRCRVDWHANDGILLKEVDR--VLRPNGYFVYSAPP 332 (617)
Q Consensus 282 d~~~-Lpf~d~sFDlV~~s~~l~h~~~d~~~~L~el~R--vLrPGG~Liis~p~ 332 (617)
|+.+ ++..+++||+|++... .+. .+...++.++.+ +|+|||.++++..+
T Consensus 111 D~~~~~~~~~~~fD~V~~~~p-~~~-~~~~~~l~~l~~~~~L~pgG~l~i~~~~ 162 (202)
T 2fpo_A 111 NAMSFLAQKGTPHNIVFVDPP-FRR-GLLEETINLLEDNGWLADEALIYVESEV 162 (202)
T ss_dssp CHHHHHSSCCCCEEEEEECCS-SST-TTHHHHHHHHHHTTCEEEEEEEEEEEEG
T ss_pred CHHHHHhhcCCCCCEEEECCC-CCC-CcHHHHHHHHHhcCccCCCcEEEEEECC
Confidence 8755 5666778999998754 232 356778888865 59999999998753
No 151
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.09 E-value=3e-10 Score=114.91 Aligned_cols=99 Identities=15% Similarity=0.133 Sum_probs=81.5
Q ss_pred cCCCCeEEEECCCCcHHHHHhccC-CCcEEEeeecCCcHHHHHHHHHh-----C---CCcEEEEecCCCCCCCCCCeeEE
Q 039518 226 SAGVFQVLDVGCGVASFSAFLLPL-DIQTMSFAPKDGHENQIQFALER-----G---IGAMISALSTKQLPYPSSSFEMV 296 (617)
Q Consensus 226 ~~~g~rVLDIGCGtG~~a~~La~~-gv~~v~v~~iDis~~~lq~A~er-----g---~~~~~~~~d~~~Lpf~d~sFDlV 296 (617)
+.++.+|||+|||+|.++..+++. +.. ..+.++|+++.+++.|+++ + .++.+..+|+..+++++++||+|
T Consensus 97 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~-~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d~~~~~~~~~~~D~v 175 (280)
T 1i9g_A 97 IFPGARVLEAGAGSGALTLSLLRAVGPA-GQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDLADSELPDGSVDRA 175 (280)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTT-SEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCGGGCCCCTTCEEEE
T ss_pred CCCCCEEEEEcccccHHHHHHHHHhCCC-CEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEECchHhcCCCCCceeEE
Confidence 356778999999999999999885 221 2678889999999998876 3 35788888988888888899999
Q ss_pred EecccccccccchHHHHHHHHHhccCCeEEEEEeC
Q 039518 297 HCSRCRVDWHANDGILLKEVDRVLRPNGYFVYSAP 331 (617)
Q Consensus 297 ~~s~~l~h~~~d~~~~L~el~RvLrPGG~Liis~p 331 (617)
++. . .++..++.++.++|+|||++++..+
T Consensus 176 ~~~-----~-~~~~~~l~~~~~~L~pgG~l~~~~~ 204 (280)
T 1i9g_A 176 VLD-----M-LAPWEVLDAVSRLLVAGGVLMVYVA 204 (280)
T ss_dssp EEE-----S-SCGGGGHHHHHHHEEEEEEEEEEES
T ss_pred EEC-----C-cCHHHHHHHHHHhCCCCCEEEEEeC
Confidence 973 2 2566899999999999999999986
No 152
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=99.09 E-value=3.1e-10 Score=117.82 Aligned_cols=127 Identities=13% Similarity=0.107 Sum_probs=92.5
Q ss_pred CCCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHhC---------CCcEEEEecCCCCCC--CCCCeeEE
Q 039518 228 GVFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALERG---------IGAMISALSTKQLPY--PSSSFEMV 296 (617)
Q Consensus 228 ~g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~erg---------~~~~~~~~d~~~Lpf--~d~sFDlV 296 (617)
++.+|||||||+|.++..+++... ...++++|+++.+++.|+++. .++.+..+|...++. ++++||+|
T Consensus 95 ~~~~VLdiG~G~G~~~~~l~~~~~-~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~fDvI 173 (304)
T 3bwc_A 95 KPERVLIIGGGDGGVLREVLRHGT-VEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLAFVRQTPDNTYDVV 173 (304)
T ss_dssp SCCEEEEEECTTSHHHHHHHTCTT-CCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHSSCTTCEEEE
T ss_pred CCCeEEEEcCCCCHHHHHHHhCCC-CCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHHhccCCceeEE
Confidence 456899999999999999987632 237888999999999998764 347788888765543 47889999
Q ss_pred Eecccccccccch----HHHHHHHHHhccCCeEEEEEeCCCCCCCCCChhhHHHHHHHHHHcCceEEE
Q 039518 297 HCSRCRVDWHAND----GILLKEVDRVLRPNGYFVYSAPPAYRKDKDYPLIWDKLVNLTTAMCWKLIA 360 (617)
Q Consensus 297 ~~s~~l~h~~~d~----~~~L~el~RvLrPGG~Liis~p~~~~~~~~~~~~W~~le~La~~~gw~~v~ 360 (617)
++........ .. ..+++++.++|+|||.+++....... .......+.+.+++.||..+.
T Consensus 174 i~d~~~~~~~-~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~----~~~~~~~~~~~l~~~GF~~v~ 236 (304)
T 3bwc_A 174 IIDTTDPAGP-ASKLFGEAFYKDVLRILKPDGICCNQGESIWL----DLELIEKMSRFIRETGFASVQ 236 (304)
T ss_dssp EEECC----------CCHHHHHHHHHHEEEEEEEEEEECCTTT----CHHHHHHHHHHHHHHTCSEEE
T ss_pred EECCCCcccc-chhhhHHHHHHHHHHhcCCCcEEEEecCCccc----chHHHHHHHHHHHhCCCCcEE
Confidence 9864332222 11 57899999999999999998653211 122245577888888998665
No 153
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=99.08 E-value=2.4e-10 Score=119.30 Aligned_cols=129 Identities=16% Similarity=0.083 Sum_probs=91.9
Q ss_pred CCCCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHh----CC-CcEEEEecCCCCCCCCCCeeEEEecc-
Q 039518 227 AGVFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALER----GI-GAMISALSTKQLPYPSSSFEMVHCSR- 300 (617)
Q Consensus 227 ~~g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~er----g~-~~~~~~~d~~~Lpf~d~sFDlV~~s~- 300 (617)
.++.+|||+|||+|..+..|++.......+.++|+++.+++.++++ +. ++.+..+|+..++..+++||+|++..
T Consensus 117 ~~g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g~~~v~~~~~D~~~~~~~~~~fD~Il~d~P 196 (315)
T 1ixk_A 117 KPGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGVLNVILFHSSSLHIGELNVEFDKILLDAP 196 (315)
T ss_dssp CTTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTCCSEEEESSCGGGGGGGCCCEEEEEEECC
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhCCCeEEEEECChhhcccccccCCEEEEeCC
Confidence 4667899999999999999987532223678899999999988776 55 57788888877765567899999731
Q ss_pred -----cccc-------ccc--------chHHHHHHHHHhccCCeEEEEEeCCCCCCCCCChhhHHHHHHHHHHcCceEEE
Q 039518 301 -----CRVD-------WHA--------NDGILLKEVDRVLRPNGYFVYSAPPAYRKDKDYPLIWDKLVNLTTAMCWKLIA 360 (617)
Q Consensus 301 -----~l~h-------~~~--------d~~~~L~el~RvLrPGG~Liis~p~~~~~~~~~~~~W~~le~La~~~gw~~v~ 360 (617)
.+.+ |.. ....+|.++.++|||||++++++-..... +. -..+..++++.+|+.+.
T Consensus 197 csg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpGG~lv~stcs~~~~--En---e~~v~~~l~~~~~~~~~ 271 (315)
T 1ixk_A 197 CTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYSTCSLEPE--EN---EFVIQWALDNFDVELLP 271 (315)
T ss_dssp TTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCCGG--GT---HHHHHHHHHHSSEEEEC
T ss_pred CCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEeCCCChH--Hh---HHHHHHHHhcCCCEEec
Confidence 1111 110 01478999999999999999987543322 11 22367777888877654
No 154
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=99.08 E-value=1.3e-10 Score=125.28 Aligned_cols=102 Identities=13% Similarity=0.085 Sum_probs=81.8
Q ss_pred cCCCCeEEEECCCCcHHHHHhccC-CCcEEEeeecCCcHHHHHHHHHh-----------C---CCcEEEEecCCCCCCCC
Q 039518 226 SAGVFQVLDVGCGVASFSAFLLPL-DIQTMSFAPKDGHENQIQFALER-----------G---IGAMISALSTKQLPYPS 290 (617)
Q Consensus 226 ~~~g~rVLDIGCGtG~~a~~La~~-gv~~v~v~~iDis~~~lq~A~er-----------g---~~~~~~~~d~~~Lpf~d 290 (617)
+.++.+|||||||+|.++..++.. +.. .+.++|+++.+++.|+++ | .++.+..+|+..+|+.+
T Consensus 171 l~~gd~VLDLGCGtG~l~l~lA~~~g~~--kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~~rVefi~GD~~~lp~~d 248 (438)
T 3uwp_A 171 MTDDDLFVDLGSGVGQVVLQVAAATNCK--HHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLERGDFLSEEWRE 248 (438)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHCCCS--EEEEEECCHHHHHHHHHHHHHHHHHHHHHTBCCCEEEEEECCTTSHHHHH
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHCCCC--EEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEECcccCCcccc
Confidence 456778999999999999988864 332 578899999988888652 3 35889999999888754
Q ss_pred --CCeeEEEecccccccccchHHHHHHHHHhccCCeEEEEEeC
Q 039518 291 --SSFEMVHCSRCRVDWHANDGILLKEVDRVLRPNGYFVYSAP 331 (617)
Q Consensus 291 --~sFDlV~~s~~l~h~~~d~~~~L~el~RvLrPGG~Liis~p 331 (617)
..||+|+++..+ + .++....|.+++|+|||||.|+++.+
T Consensus 249 ~~~~aDVVf~Nn~~-F-~pdl~~aL~Ei~RvLKPGGrIVssE~ 289 (438)
T 3uwp_A 249 RIANTSVIFVNNFA-F-GPEVDHQLKERFANMKEGGRIVSSKP 289 (438)
T ss_dssp HHHTCSEEEECCTT-C-CHHHHHHHHHHHTTSCTTCEEEESSC
T ss_pred ccCCccEEEEcccc-c-CchHHHHHHHHHHcCCCCcEEEEeec
Confidence 479999987643 3 35788899999999999999998754
No 155
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=99.08 E-value=1.5e-10 Score=106.99 Aligned_cols=97 Identities=15% Similarity=0.116 Sum_probs=75.3
Q ss_pred CCCCeEEEECCCCcHHHHHhccC-CCcEEEeeecCCcHHHHHHHHHhCCCcEEEEecCCCCC--------CCCCCeeEEE
Q 039518 227 AGVFQVLDVGCGVASFSAFLLPL-DIQTMSFAPKDGHENQIQFALERGIGAMISALSTKQLP--------YPSSSFEMVH 297 (617)
Q Consensus 227 ~~g~rVLDIGCGtG~~a~~La~~-gv~~v~v~~iDis~~~lq~A~erg~~~~~~~~d~~~Lp--------f~d~sFDlV~ 297 (617)
.++.+|||+|||+|.++..+++. +.. ..++++|+++ +++. .++.+..+|+..++ +++++||+|+
T Consensus 21 ~~~~~vLd~G~G~G~~~~~l~~~~~~~-~~v~~~D~~~-~~~~-----~~~~~~~~d~~~~~~~~~~~~~~~~~~~D~i~ 93 (180)
T 1ej0_A 21 KPGMTVVDLGAAPGGWSQYVVTQIGGK-GRIIACDLLP-MDPI-----VGVDFLQGDFRDELVMKALLERVGDSKVQVVM 93 (180)
T ss_dssp CTTCEEEEESCTTCHHHHHHHHHHCTT-CEEEEEESSC-CCCC-----TTEEEEESCTTSHHHHHHHHHHHTTCCEEEEE
T ss_pred CCCCeEEEeCCCCCHHHHHHHHHhCCC-CeEEEEECcc-cccc-----CcEEEEEcccccchhhhhhhccCCCCceeEEE
Confidence 45668999999999999999887 332 2677788887 5432 35778888888776 6778999999
Q ss_pred ecccccccccch-----------HHHHHHHHHhccCCeEEEEEeC
Q 039518 298 CSRCRVDWHAND-----------GILLKEVDRVLRPNGYFVYSAP 331 (617)
Q Consensus 298 ~s~~l~h~~~d~-----------~~~L~el~RvLrPGG~Liis~p 331 (617)
++..+++.. +. ..++.++.++|+|||.++++.+
T Consensus 94 ~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 137 (180)
T 1ej0_A 94 SDMAPNMSG-TPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVF 137 (180)
T ss_dssp ECCCCCCCS-CHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred ECCCccccC-CCccchHHHHHHHHHHHHHHHHHcCCCcEEEEEEe
Confidence 976544332 33 6889999999999999999875
No 156
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.08 E-value=1.2e-10 Score=109.55 Aligned_cols=101 Identities=8% Similarity=0.052 Sum_probs=77.2
Q ss_pred CCCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHh----CC--CcEEEEecCCC-CCCCCCCeeEEEecc
Q 039518 228 GVFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALER----GI--GAMISALSTKQ-LPYPSSSFEMVHCSR 300 (617)
Q Consensus 228 ~g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~er----g~--~~~~~~~d~~~-Lpf~d~sFDlV~~s~ 300 (617)
++.+|||+|||+|.++..+++++. ..++++|+++.+++.|+++ +. ++.+..+|+.+ ++..+++||+|+++.
T Consensus 31 ~~~~vLDlGcG~G~~~~~l~~~~~--~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~fD~i~~~~ 108 (177)
T 2esr_A 31 NGGRVLDLFAGSGGLAIEAVSRGM--SAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAERAIDCLTGRFDLVFLDP 108 (177)
T ss_dssp CSCEEEEETCTTCHHHHHHHHTTC--CEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHHHHHHBCSCEEEEEECC
T ss_pred CCCeEEEeCCCCCHHHHHHHHcCC--CEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcHHHhHHhhcCCCCEEEECC
Confidence 456799999999999999998753 3688899999999999875 33 36777777655 344456799999875
Q ss_pred cccccccchHHHHHHHH--HhccCCeEEEEEeCC
Q 039518 301 CRVDWHANDGILLKEVD--RVLRPNGYFVYSAPP 332 (617)
Q Consensus 301 ~l~h~~~d~~~~L~el~--RvLrPGG~Liis~p~ 332 (617)
..+ . ......+..+. ++|+|||.+++..+.
T Consensus 109 ~~~-~-~~~~~~~~~l~~~~~L~~gG~l~~~~~~ 140 (177)
T 2esr_A 109 PYA-K-ETIVATIEALAAKNLLSEQVMVVCETDK 140 (177)
T ss_dssp SSH-H-HHHHHHHHHHHHTTCEEEEEEEEEEEET
T ss_pred CCC-c-chHHHHHHHHHhCCCcCCCcEEEEEECC
Confidence 432 1 24566777776 999999999998764
No 157
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=99.07 E-value=4.4e-11 Score=119.72 Aligned_cols=127 Identities=13% Similarity=0.211 Sum_probs=81.4
Q ss_pred CCCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHhCCCcEEEE-ecC-----CCCCCCCCCeeEEEeccc
Q 039518 228 GVFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALERGIGAMISA-LST-----KQLPYPSSSFEMVHCSRC 301 (617)
Q Consensus 228 ~g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~erg~~~~~~~-~d~-----~~Lpf~d~sFDlV~~s~~ 301 (617)
.+.+|||||||+|.++..|++++.. .++++|+++.|++.|+++...+.... .++ ..++ ...||.+.+..+
T Consensus 37 ~g~~VLDiGcGtG~~t~~la~~g~~--~V~gvDis~~ml~~a~~~~~~~~~~~~~~~~~~~~~~~~--~~~~d~~~~D~v 112 (232)
T 3opn_A 37 NGKTCLDIGSSTGGFTDVMLQNGAK--LVYALDVGTNQLAWKIRSDERVVVMEQFNFRNAVLADFE--QGRPSFTSIDVS 112 (232)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTCS--EEEEECSSCCCCCHHHHTCTTEEEECSCCGGGCCGGGCC--SCCCSEEEECCS
T ss_pred CCCEEEEEccCCCHHHHHHHhcCCC--EEEEEcCCHHHHHHHHHhCccccccccceEEEeCHhHcC--cCCCCEEEEEEE
Confidence 3567999999999999999998643 68889999999999887654432211 111 1222 112344433322
Q ss_pred ccccccchHHHHHHHHHhccCCeEEEEEeCCCCCCCC----------C---ChhhHHHHHHHHHHcCceEEEEe
Q 039518 302 RVDWHANDGILLKEVDRVLRPNGYFVYSAPPAYRKDK----------D---YPLIWDKLVNLTTAMCWKLIARK 362 (617)
Q Consensus 302 l~h~~~d~~~~L~el~RvLrPGG~Liis~p~~~~~~~----------~---~~~~W~~le~La~~~gw~~v~~~ 362 (617)
+.+ ...+|.++.|+|||||++++...+...... + +....+++.+++++.||+++...
T Consensus 113 ~~~----l~~~l~~i~rvLkpgG~lv~~~~p~~e~~~~~~~~~G~~~d~~~~~~~~~~l~~~l~~aGf~v~~~~ 182 (232)
T 3opn_A 113 FIS----LDLILPPLYEILEKNGEVAALIKPQFEAGREQVGKNGIIRDPKVHQMTIEKVLKTATQLGFSVKGLT 182 (232)
T ss_dssp SSC----GGGTHHHHHHHSCTTCEEEEEECHHHHSCHHHHC-CCCCCCHHHHHHHHHHHHHHHHHHTEEEEEEE
T ss_pred hhh----HHHHHHHHHHhccCCCEEEEEECcccccCHHHhCcCCeecCcchhHHHHHHHHHHHHHCCCEEEEEE
Confidence 222 257999999999999999997421111000 0 11123448888999999987643
No 158
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=99.07 E-value=6.7e-10 Score=110.98 Aligned_cols=103 Identities=16% Similarity=0.192 Sum_probs=78.0
Q ss_pred CCCCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHh------------CC-CcEEEEecCCC-CC--CCC
Q 039518 227 AGVFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALER------------GI-GAMISALSTKQ-LP--YPS 290 (617)
Q Consensus 227 ~~g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~er------------g~-~~~~~~~d~~~-Lp--f~d 290 (617)
.++.+|||||||+|.++..+++.+.. ..++++|+++.+++.|+++ +. ++.+..+|+.. ++ +++
T Consensus 48 ~~~~~vLDiGcG~G~~~~~la~~~~~-~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~nv~~~~~D~~~~l~~~~~~ 126 (246)
T 2vdv_E 48 TKKVTIADIGCGFGGLMIDLSPAFPE-DLILGMEIRVQVTNYVEDRIIALRNNTASKHGFQNINVLRGNAMKFLPNFFEK 126 (246)
T ss_dssp SCCEEEEEETCTTSHHHHHHHHHSTT-SEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTTTEEEEECCTTSCGGGTSCT
T ss_pred CCCCEEEEEcCCCCHHHHHHHHhCCC-CCEEEEEcCHHHHHHHHHHHHHHhhccccccCCCcEEEEeccHHHHHHHhccc
Confidence 34567999999999999999987643 2688899999999888653 43 57888888865 66 778
Q ss_pred CCeeEEEecccccccccc--------hHHHHHHHHHhccCCeEEEEEeC
Q 039518 291 SSFEMVHCSRCRVDWHAN--------DGILLKEVDRVLRPNGYFVYSAP 331 (617)
Q Consensus 291 ~sFDlV~~s~~l~h~~~d--------~~~~L~el~RvLrPGG~Liis~p 331 (617)
++||.|+.... ..|... ...++.++.++|+|||.|++.+.
T Consensus 127 ~~~d~v~~~~p-~p~~k~~~~~~r~~~~~~l~~~~~~LkpgG~l~~~td 174 (246)
T 2vdv_E 127 GQLSKMFFCFP-DPHFKQRKHKARIITNTLLSEYAYVLKEGGVVYTITD 174 (246)
T ss_dssp TCEEEEEEESC-CCC------CSSCCCHHHHHHHHHHEEEEEEEEEEES
T ss_pred cccCEEEEECC-CcccccchhHHhhccHHHHHHHHHHcCCCCEEEEEec
Confidence 89999985421 111100 04799999999999999999763
No 159
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.07 E-value=7.9e-10 Score=112.27 Aligned_cols=120 Identities=12% Similarity=0.122 Sum_probs=92.6
Q ss_pred cCCCCeEEEECCCCcHHHHHhccC-CCcEEEeeecCCcHHHHHHHHHh----CC--CcEEEEecCCCCCCCCCCeeEEEe
Q 039518 226 SAGVFQVLDVGCGVASFSAFLLPL-DIQTMSFAPKDGHENQIQFALER----GI--GAMISALSTKQLPYPSSSFEMVHC 298 (617)
Q Consensus 226 ~~~g~rVLDIGCGtG~~a~~La~~-gv~~v~v~~iDis~~~lq~A~er----g~--~~~~~~~d~~~Lpf~d~sFDlV~~ 298 (617)
+.++.+|||+|||+|.++..+++. +.. ..+.++|+++.+++.|+++ +. ++.+...|+.+. +++++||+|++
T Consensus 110 ~~~~~~VLDiG~G~G~~~~~la~~~~~~-~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~~~~~~D~V~~ 187 (277)
T 1o54_A 110 VKEGDRIIDTGVGSGAMCAVLARAVGSS-GKVFAYEKREEFAKLAESNLTKWGLIERVTIKVRDISEG-FDEKDVDALFL 187 (277)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHTTTT-CEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCCGGGC-CSCCSEEEEEE
T ss_pred CCCCCEEEEECCcCCHHHHHHHHHhCCC-cEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHc-ccCCccCEEEE
Confidence 456778999999999999999887 432 2778889999999999876 43 567777787665 66778999997
Q ss_pred cccccccccchHHHHHHHHHhccCCeEEEEEeCCCCCCCCCChhhHHHHHHHHHHcCceEEEE
Q 039518 299 SRCRVDWHANDGILLKEVDRVLRPNGYFVYSAPPAYRKDKDYPLIWDKLVNLTTAMCWKLIAR 361 (617)
Q Consensus 299 s~~l~h~~~d~~~~L~el~RvLrPGG~Liis~p~~~~~~~~~~~~W~~le~La~~~gw~~v~~ 361 (617)
. . .++..++.++.++|+|||.+++..+.. ....++.+.+++.||..+..
T Consensus 188 ~-----~-~~~~~~l~~~~~~L~pgG~l~~~~~~~--------~~~~~~~~~l~~~gf~~~~~ 236 (277)
T 1o54_A 188 D-----V-PDPWNYIDKCWEALKGGGRFATVCPTT--------NQVQETLKKLQELPFIRIEV 236 (277)
T ss_dssp C-----C-SCGGGTHHHHHHHEEEEEEEEEEESSH--------HHHHHHHHHHHHSSEEEEEE
T ss_pred C-----C-cCHHHHHHHHHHHcCCCCEEEEEeCCH--------HHHHHHHHHHHHCCCceeEE
Confidence 4 2 366789999999999999999988631 11445666677789986653
No 160
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=99.07 E-value=9e-10 Score=112.74 Aligned_cols=128 Identities=11% Similarity=-0.003 Sum_probs=88.7
Q ss_pred CCCeEEEECCCCcHHHHHhccCCCcEEEeeecCC-cHHHHHHHHHhC---------------CCcEEEEecCCCCC--C-
Q 039518 228 GVFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDG-HENQIQFALERG---------------IGAMISALSTKQLP--Y- 288 (617)
Q Consensus 228 ~g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDi-s~~~lq~A~erg---------------~~~~~~~~d~~~Lp--f- 288 (617)
++.+|||+|||+|.++..+++.+.. .++++|+ ++.+++.|+++. .++.+...+..+.. +
T Consensus 79 ~~~~vLDlG~G~G~~~~~~a~~~~~--~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 156 (281)
T 3bzb_A 79 AGKTVCELGAGAGLVSIVAFLAGAD--QVVATDYPDPEILNSLESNIREHTANSCSSETVKRASPKVVPYRWGDSPDSLQ 156 (281)
T ss_dssp TTCEEEETTCTTSHHHHHHHHTTCS--EEEEEECSCHHHHHHHHHHHHTTCC----------CCCEEEECCTTSCTHHHH
T ss_pred CCCeEEEecccccHHHHHHHHcCCC--EEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCCCCeEEEEecCCCccHHHH
Confidence 5567999999999999999887642 6788899 899999887653 13444443322211 1
Q ss_pred ---CCCCeeEEEecccccccccchHHHHHHHHHhcc---C--CeEEEEEeCCCCCCCCCChhhHHHHHHHHHHcC-ceEE
Q 039518 289 ---PSSSFEMVHCSRCRVDWHANDGILLKEVDRVLR---P--NGYFVYSAPPAYRKDKDYPLIWDKLVNLTTAMC-WKLI 359 (617)
Q Consensus 289 ---~d~sFDlV~~s~~l~h~~~d~~~~L~el~RvLr---P--GG~Liis~p~~~~~~~~~~~~W~~le~La~~~g-w~~v 359 (617)
++++||+|+++.++++. .+...++.++.++|+ | ||.+++...+........ -..+.+.+++.| |++.
T Consensus 157 ~~~~~~~fD~Ii~~dvl~~~-~~~~~ll~~l~~~Lk~~~p~~gG~l~v~~~~~~~~~~~~---~~~~~~~l~~~G~f~v~ 232 (281)
T 3bzb_A 157 RCTGLQRFQVVLLADLLSFH-QAHDALLRSVKMLLALPANDPTAVALVTFTHHRPHLAER---DLAFFRLVNADGALIAE 232 (281)
T ss_dssp HHHSCSSBSEEEEESCCSCG-GGHHHHHHHHHHHBCCTTTCTTCEEEEEECC-----------CTHHHHHHHHSTTEEEE
T ss_pred hhccCCCCCEEEEeCcccCh-HHHHHHHHHHHHHhcccCCCCCCEEEEEEEeeecccchh---HHHHHHHHHhcCCEEEE
Confidence 35789999998877664 478899999999999 9 999877654322111110 123556778889 9877
Q ss_pred EE
Q 039518 360 AR 361 (617)
Q Consensus 360 ~~ 361 (617)
..
T Consensus 233 ~~ 234 (281)
T 3bzb_A 233 PW 234 (281)
T ss_dssp EE
T ss_pred Ee
Confidence 64
No 161
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=99.06 E-value=2.1e-10 Score=119.41 Aligned_cols=98 Identities=11% Similarity=0.055 Sum_probs=79.4
Q ss_pred CCCCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHh----CC-CcEEEEecCCCCCCCCCCeeEEEeccc
Q 039518 227 AGVFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALER----GI-GAMISALSTKQLPYPSSSFEMVHCSRC 301 (617)
Q Consensus 227 ~~g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~er----g~-~~~~~~~d~~~Lpf~d~sFDlV~~s~~ 301 (617)
.++.+|||||||+|.++..+++.+.....++++|+++.+++.|+++ +. ++.+..+|..+.+.++++||+|++..+
T Consensus 74 ~~~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~~~v~~~~~d~~~~~~~~~~fD~Iv~~~~ 153 (317)
T 1dl5_A 74 DKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGDGYYGVPEFSPYDVIFVTVG 153 (317)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGGGCCEEEEEECSB
T ss_pred CCcCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCCeEEEECChhhccccCCCeEEEEEcCC
Confidence 4667899999999999999988754322578889999999999876 43 478888888776555678999999987
Q ss_pred ccccccchHHHHHHHHHhccCCeEEEEEeC
Q 039518 302 RVDWHANDGILLKEVDRVLRPNGYFVYSAP 331 (617)
Q Consensus 302 l~h~~~d~~~~L~el~RvLrPGG~Liis~p 331 (617)
+++.. .++.++|||||.++++..
T Consensus 154 ~~~~~-------~~~~~~LkpgG~lvi~~~ 176 (317)
T 1dl5_A 154 VDEVP-------ETWFTQLKEGGRVIVPIN 176 (317)
T ss_dssp BSCCC-------HHHHHHEEEEEEEEEEBC
T ss_pred HHHHH-------HHHHHhcCCCcEEEEEEC
Confidence 76654 578899999999999864
No 162
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=99.05 E-value=7.5e-10 Score=115.98 Aligned_cols=98 Identities=19% Similarity=0.184 Sum_probs=77.7
Q ss_pred CCCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHh----CC--CcEEEEecCCCCCCCCCCeeEEEeccc
Q 039518 228 GVFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALER----GI--GAMISALSTKQLPYPSSSFEMVHCSRC 301 (617)
Q Consensus 228 ~g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~er----g~--~~~~~~~d~~~Lpf~d~sFDlV~~s~~ 301 (617)
++.+|||||||+|.++..+++.+.. .+.++|++ .+++.|+++ +. .+.+..+++.++++++++||+|++...
T Consensus 38 ~~~~VLDiGcGtG~ls~~la~~g~~--~v~~vD~s-~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~Ivs~~~ 114 (328)
T 1g6q_1 38 KDKIVLDVGCGTGILSMFAAKHGAK--HVIGVDMS-SIIEMAKELVELNGFSDKITLLRGKLEDVHLPFPKVDIIISEWM 114 (328)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTCCS--EEEEEESS-THHHHHHHHHHHTTCTTTEEEEESCTTTSCCSSSCEEEEEECCC
T ss_pred CCCEEEEecCccHHHHHHHHHCCCC--EEEEEChH-HHHHHHHHHHHHcCCCCCEEEEECchhhccCCCCcccEEEEeCc
Confidence 3457999999999999999988642 67788998 577777664 43 478888999999888889999998743
Q ss_pred cccc--ccchHHHHHHHHHhccCCeEEEE
Q 039518 302 RVDW--HANDGILLKEVDRVLRPNGYFVY 328 (617)
Q Consensus 302 l~h~--~~d~~~~L~el~RvLrPGG~Lii 328 (617)
.... ...+..++.++.++|+|||.++.
T Consensus 115 ~~~l~~~~~~~~~l~~~~~~LkpgG~li~ 143 (328)
T 1g6q_1 115 GYFLLYESMMDTVLYARDHYLVEGGLIFP 143 (328)
T ss_dssp BTTBSTTCCHHHHHHHHHHHEEEEEEEES
T ss_pred hhhcccHHHHHHHHHHHHhhcCCCeEEEE
Confidence 2222 24577899999999999999974
No 163
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=99.05 E-value=1.1e-09 Score=107.51 Aligned_cols=132 Identities=9% Similarity=0.060 Sum_probs=87.8
Q ss_pred cccCCCCeEEEECCCCcHHHHHhccC-CCcEEEeeecCCcHHHHHHHHHh---CCCcEEEEecCCCCC---CCCCCeeEE
Q 039518 224 LRSAGVFQVLDVGCGVASFSAFLLPL-DIQTMSFAPKDGHENQIQFALER---GIGAMISALSTKQLP---YPSSSFEMV 296 (617)
Q Consensus 224 lr~~~g~rVLDIGCGtG~~a~~La~~-gv~~v~v~~iDis~~~lq~A~er---g~~~~~~~~d~~~Lp---f~d~sFDlV 296 (617)
+.+.++.+|||+|||+|.++..|+++ +... .+.++|+++.+++.+.++ ..++.+..+|+.... ...++||+|
T Consensus 69 ~~~~~~~~vLDlG~G~G~~~~~la~~~~~~~-~v~~vD~s~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~D~v 147 (227)
T 1g8a_A 69 FPIKPGKSVLYLGIASGTTASHVSDIVGWEG-KIFGIEFSPRVLRELVPIVEERRNIVPILGDATKPEEYRALVPKVDVI 147 (227)
T ss_dssp CCCCTTCEEEEETTTSTTHHHHHHHHHCTTS-EEEEEESCHHHHHHHHHHHSSCTTEEEEECCTTCGGGGTTTCCCEEEE
T ss_pred cCCCCCCEEEEEeccCCHHHHHHHHHhCCCe-EEEEEECCHHHHHHHHHHHhccCCCEEEEccCCCcchhhcccCCceEE
Confidence 34567788999999999999999876 3222 678889999988877664 235788888876631 124589999
Q ss_pred EecccccccccchHHHHHHHHHhccCCeEEEEEeCCCCCCC-CCChhhH-HHHHHHHHHcCceEEEE
Q 039518 297 HCSRCRVDWHANDGILLKEVDRVLRPNGYFVYSAPPAYRKD-KDYPLIW-DKLVNLTTAMCWKLIAR 361 (617)
Q Consensus 297 ~~s~~l~h~~~d~~~~L~el~RvLrPGG~Liis~p~~~~~~-~~~~~~W-~~le~La~~~gw~~v~~ 361 (617)
++... .......++.++.++|||||+++++........ +...... +++..+ ... |+.+..
T Consensus 148 ~~~~~---~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~l~~l-~~~-f~~~~~ 209 (227)
T 1g8a_A 148 FEDVA---QPTQAKILIDNAEVYLKRGGYGMIAVKSRSIDVTKEPEQVFREVEREL-SEY-FEVIER 209 (227)
T ss_dssp EECCC---STTHHHHHHHHHHHHEEEEEEEEEEEEGGGTCTTSCHHHHHHHHHHHH-HTT-SEEEEE
T ss_pred EECCC---CHhHHHHHHHHHHHhcCCCCEEEEEEecCCCCCCCChhhhhHHHHHHH-Hhh-ceeeeE
Confidence 97642 222234559999999999999999743221111 1111111 235666 555 887753
No 164
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=99.05 E-value=1.4e-11 Score=121.95 Aligned_cols=97 Identities=15% Similarity=0.112 Sum_probs=79.9
Q ss_pred CCCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHh----CC--CcEEEEecCCCCCCCCCCeeEEEeccc
Q 039518 228 GVFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALER----GI--GAMISALSTKQLPYPSSSFEMVHCSRC 301 (617)
Q Consensus 228 ~g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~er----g~--~~~~~~~d~~~Lpf~d~sFDlV~~s~~ 301 (617)
++.+|||+|||+|.++..+++.+. .++++|+++.+++.|+++ ++ ++.+..+|+..++ ++++||+|+++..
T Consensus 78 ~~~~vLD~gcG~G~~~~~la~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~-~~~~~D~v~~~~~ 153 (241)
T 3gdh_A 78 KCDVVVDAFCGVGGNTIQFALTGM---RVIAIDIDPVKIALARNNAEVYGIADKIEFICGDFLLLA-SFLKADVVFLSPP 153 (241)
T ss_dssp CCSEEEETTCTTSHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHG-GGCCCSEEEECCC
T ss_pred CCCEEEECccccCHHHHHHHHcCC---EEEEEECCHHHHHHHHHHHHHcCCCcCeEEEECChHHhc-ccCCCCEEEECCC
Confidence 456799999999999999999873 678899999999998875 43 5888888887776 5679999999876
Q ss_pred ccccccchHHHHHHHHHhccCCeEEEEE
Q 039518 302 RVDWHANDGILLKEVDRVLRPNGYFVYS 329 (617)
Q Consensus 302 l~h~~~d~~~~L~el~RvLrPGG~Liis 329 (617)
+++.. +....+.++.++|+|||.+++.
T Consensus 154 ~~~~~-~~~~~~~~~~~~L~pgG~~i~~ 180 (241)
T 3gdh_A 154 WGGPD-YATAETFDIRTMMSPDGFEIFR 180 (241)
T ss_dssp CSSGG-GGGSSSBCTTTSCSSCHHHHHH
T ss_pred cCCcc-hhhhHHHHHHhhcCCcceeHHH
Confidence 65543 5555788999999999997764
No 165
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=99.04 E-value=3e-10 Score=110.22 Aligned_cols=99 Identities=11% Similarity=0.090 Sum_probs=76.5
Q ss_pred CCCCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHh----CC-CcEEEEecCCCCCCCCCCeeEEEeccc
Q 039518 227 AGVFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALER----GI-GAMISALSTKQLPYPSSSFEMVHCSRC 301 (617)
Q Consensus 227 ~~g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~er----g~-~~~~~~~d~~~Lpf~d~sFDlV~~s~~ 301 (617)
.++.+|||||||+|.++..+++.......++++|+++.+++.|+++ +. ++.+...|.......+++||+|++..+
T Consensus 76 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~~ 155 (215)
T 2yxe_A 76 KPGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGYDNVIVIVGDGTLGYEPLAPYDRIYTTAA 155 (215)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTCTTEEEEESCGGGCCGGGCCEEEEEESSB
T ss_pred CCCCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCcccCCCCCCCeeEEEECCc
Confidence 4566899999999999999988741112678889999999999876 33 467777776432223678999999987
Q ss_pred ccccccchHHHHHHHHHhccCCeEEEEEeCC
Q 039518 302 RVDWHANDGILLKEVDRVLRPNGYFVYSAPP 332 (617)
Q Consensus 302 l~h~~~d~~~~L~el~RvLrPGG~Liis~p~ 332 (617)
++++. .++.++|||||.+++..++
T Consensus 156 ~~~~~-------~~~~~~L~pgG~lv~~~~~ 179 (215)
T 2yxe_A 156 GPKIP-------EPLIRQLKDGGKLLMPVGR 179 (215)
T ss_dssp BSSCC-------HHHHHTEEEEEEEEEEESS
T ss_pred hHHHH-------HHHHHHcCCCcEEEEEECC
Confidence 77654 4889999999999998863
No 166
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=99.03 E-value=6.9e-10 Score=117.17 Aligned_cols=100 Identities=15% Similarity=0.167 Sum_probs=79.7
Q ss_pred CCCCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHh----CC--CcEEEEecCCCCCCCCCCeeEEEecc
Q 039518 227 AGVFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALER----GI--GAMISALSTKQLPYPSSSFEMVHCSR 300 (617)
Q Consensus 227 ~~g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~er----g~--~~~~~~~d~~~Lpf~d~sFDlV~~s~ 300 (617)
.++.+|||||||+|.++..+++.+.. .++++|+++ +++.|+++ +. ++.+..+|+++++++ ++||+|++..
T Consensus 49 ~~~~~VLDiGcGtG~ls~~la~~g~~--~V~~vD~s~-~~~~a~~~~~~~~l~~~v~~~~~d~~~~~~~-~~~D~Ivs~~ 124 (348)
T 2y1w_A 49 FKDKIVLDVGCGSGILSFFAAQAGAR--KIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVEEVSLP-EQVDIIISEP 124 (348)
T ss_dssp TTTCEEEEETCTTSHHHHHHHHTTCS--EEEEEECST-HHHHHHHHHHHTTCTTTEEEEESCTTTCCCS-SCEEEEEECC
T ss_pred CCcCEEEEcCCCccHHHHHHHhCCCC--EEEEECCHH-HHHHHHHHHHHcCCCCcEEEEEcchhhCCCC-CceeEEEEeC
Confidence 35668999999999999999987642 677788885 66777654 43 478888999888765 5799999987
Q ss_pred cccccc-cchHHHHHHHHHhccCCeEEEEEe
Q 039518 301 CRVDWH-ANDGILLKEVDRVLRPNGYFVYSA 330 (617)
Q Consensus 301 ~l~h~~-~d~~~~L~el~RvLrPGG~Liis~ 330 (617)
..+|+. ++....+.++.++|+|||.+++..
T Consensus 125 ~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~ 155 (348)
T 2y1w_A 125 MGYMLFNERMLESYLHAKKYLKPSGNMFPTI 155 (348)
T ss_dssp CBTTBTTTSHHHHHHHGGGGEEEEEEEESCE
T ss_pred chhcCChHHHHHHHHHHHhhcCCCeEEEEec
Confidence 777765 445678889999999999999754
No 167
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=99.02 E-value=5.8e-10 Score=109.19 Aligned_cols=98 Identities=12% Similarity=0.140 Sum_probs=77.6
Q ss_pred CCCCeEEEECCCCcHHHHHhccC-CCcEEEeeecCCcHHHHHHHHHh----C------CCcEEEEecCCCCCCCCCCeeE
Q 039518 227 AGVFQVLDVGCGVASFSAFLLPL-DIQTMSFAPKDGHENQIQFALER----G------IGAMISALSTKQLPYPSSSFEM 295 (617)
Q Consensus 227 ~~g~rVLDIGCGtG~~a~~La~~-gv~~v~v~~iDis~~~lq~A~er----g------~~~~~~~~d~~~Lpf~d~sFDl 295 (617)
.++.+|||+|||+|.++..+++. +.. ..++++|+++.+++.|+++ + .++.+..+|....+..+++||+
T Consensus 76 ~~~~~vLDiG~G~G~~~~~la~~~~~~-~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~ 154 (226)
T 1i1n_A 76 HEGAKALDVGSGSGILTACFARMVGCT-GKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMGYAEEAPYDA 154 (226)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHCTT-CEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGCCGGGCCEEE
T ss_pred CCCCEEEEEcCCcCHHHHHHHHHhCCC-cEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCcccCcccCCCcCE
Confidence 46678999999999999999876 322 2678889999999988765 2 2577888887766555778999
Q ss_pred EEecccccccccchHHHHHHHHHhccCCeEEEEEeCC
Q 039518 296 VHCSRCRVDWHANDGILLKEVDRVLRPNGYFVYSAPP 332 (617)
Q Consensus 296 V~~s~~l~h~~~d~~~~L~el~RvLrPGG~Liis~p~ 332 (617)
|++.....++ +.++.++|||||.++++.++
T Consensus 155 i~~~~~~~~~-------~~~~~~~LkpgG~lv~~~~~ 184 (226)
T 1i1n_A 155 IHVGAAAPVV-------PQALIDQLKPGGRLILPVGP 184 (226)
T ss_dssp EEECSBBSSC-------CHHHHHTEEEEEEEEEEESC
T ss_pred EEECCchHHH-------HHHHHHhcCCCcEEEEEEec
Confidence 9988765443 36889999999999998763
No 168
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=99.01 E-value=6.8e-10 Score=117.11 Aligned_cols=127 Identities=13% Similarity=0.120 Sum_probs=93.2
Q ss_pred CCCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHhCCCcEEEEecCCCCCCCCCCeeEEEeccccccccc
Q 039518 228 GVFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALERGIGAMISALSTKQLPYPSSSFEMVHCSRCRVDWHA 307 (617)
Q Consensus 228 ~g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~erg~~~~~~~~d~~~Lpf~d~sFDlV~~s~~l~h~~~ 307 (617)
++.+|||||||+|.++..++++.... .++.+|+ +.+++.|++. ..+.+..+|+.. +++ +||+|+++.++++|.
T Consensus 193 ~~~~vlDvG~G~G~~~~~l~~~~p~~-~~~~~D~-~~~~~~a~~~-~~v~~~~~d~~~-~~~--~~D~v~~~~vlh~~~- 265 (358)
T 1zg3_A 193 GLESLVDVGGGTGGVTKLIHEIFPHL-KCTVFDQ-PQVVGNLTGN-ENLNFVGGDMFK-SIP--SADAVLLKWVLHDWN- 265 (358)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTS-EEEEEEC-HHHHSSCCCC-SSEEEEECCTTT-CCC--CCSEEEEESCGGGSC-
T ss_pred CCCEEEEECCCcCHHHHHHHHHCCCC-eEEEecc-HHHHhhcccC-CCcEEEeCccCC-CCC--CceEEEEcccccCCC-
Confidence 44679999999999999999875432 5667798 6777766642 347888888866 665 499999999988887
Q ss_pred chH--HHHHHHHHhccC---CeEEEEEeCCCCCCCCC-----C---------------hhhHHHHHHHHHHcCceEEEE
Q 039518 308 NDG--ILLKEVDRVLRP---NGYFVYSAPPAYRKDKD-----Y---------------PLIWDKLVNLTTAMCWKLIAR 361 (617)
Q Consensus 308 d~~--~~L~el~RvLrP---GG~Liis~p~~~~~~~~-----~---------------~~~W~~le~La~~~gw~~v~~ 361 (617)
++. .+|+++.++|+| ||++++.+......... . ....+++.+++++.||+.+..
T Consensus 266 d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~g~~~t~~e~~~ll~~aGf~~~~~ 344 (358)
T 1zg3_A 266 DEQSLKILKNSKEAISHKGKDGKVIIIDISIDETSDDRGLTELQLDYDLVMLTMFLGKERTKQEWEKLIYDAGFSSYKI 344 (358)
T ss_dssp HHHHHHHHHHHHHHTGGGGGGCEEEEEECEECTTCSCHHHHHHHHHHHHHHHHHHSCCCEEHHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHHHHHHhCCCCCCCcEEEEEEeccCCCCccchhhhHHHhhCHHHhccCCCCCCCHHHHHHHHHHcCCCeeEE
Confidence 555 899999999999 99999987532111110 0 011234778888999987764
No 169
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=99.01 E-value=1.6e-09 Score=107.08 Aligned_cols=96 Identities=16% Similarity=0.148 Sum_probs=78.3
Q ss_pred CCCCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHh----CC--CcEEEEecCCCCCCCCCCeeEEEecc
Q 039518 227 AGVFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALER----GI--GAMISALSTKQLPYPSSSFEMVHCSR 300 (617)
Q Consensus 227 ~~g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~er----g~--~~~~~~~d~~~Lpf~d~sFDlV~~s~ 300 (617)
.++.+|||+|||+|.++..+++.+ ..+.++|+++.+++.|+++ +. ++.+...|+.+..+++++||+|++.
T Consensus 90 ~~~~~vldiG~G~G~~~~~l~~~~---~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~- 165 (248)
T 2yvl_A 90 NKEKRVLEFGTGSGALLAVLSEVA---GEVWTFEAVEEFYKTAQKNLKKFNLGKNVKFFNVDFKDAEVPEGIFHAAFVD- 165 (248)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHS---SEEEEECSCHHHHHHHHHHHHHTTCCTTEEEECSCTTTSCCCTTCBSEEEEC-
T ss_pred CCCCEEEEeCCCccHHHHHHHHhC---CEEEEEecCHHHHHHHHHHHHHcCCCCcEEEEEcChhhcccCCCcccEEEEC-
Confidence 466789999999999999998873 3678889999999999876 33 4677777776654366789999973
Q ss_pred cccccccchHHHHHHHHHhccCCeEEEEEeC
Q 039518 301 CRVDWHANDGILLKEVDRVLRPNGYFVYSAP 331 (617)
Q Consensus 301 ~l~h~~~d~~~~L~el~RvLrPGG~Liis~p 331 (617)
..++..++.++.++|+|||.+++..+
T Consensus 166 -----~~~~~~~l~~~~~~L~~gG~l~~~~~ 191 (248)
T 2yvl_A 166 -----VREPWHYLEKVHKSLMEGAPVGFLLP 191 (248)
T ss_dssp -----SSCGGGGHHHHHHHBCTTCEEEEEES
T ss_pred -----CcCHHHHHHHHHHHcCCCCEEEEEeC
Confidence 22667899999999999999999886
No 170
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=99.00 E-value=4.5e-10 Score=110.04 Aligned_cols=98 Identities=14% Similarity=0.142 Sum_probs=77.8
Q ss_pred CCCCeEEEECCCCcHHHHHhccCCC----cEEEeeecCCcHHHHHHHHHh----C------CCcEEEEecCCCCC----C
Q 039518 227 AGVFQVLDVGCGVASFSAFLLPLDI----QTMSFAPKDGHENQIQFALER----G------IGAMISALSTKQLP----Y 288 (617)
Q Consensus 227 ~~g~rVLDIGCGtG~~a~~La~~gv----~~v~v~~iDis~~~lq~A~er----g------~~~~~~~~d~~~Lp----f 288 (617)
.++.+|||||||+|.++..+++... ....++++|+++.+++.|+++ + .++.+..+|..... .
T Consensus 79 ~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~ 158 (227)
T 2pbf_A 79 KPGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNIYQVNEEEKK 158 (227)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCGGGCCHHHHH
T ss_pred CCCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECChHhcccccCc
Confidence 4567899999999999999987642 122678889999999998876 3 35788888877654 5
Q ss_pred CCCCeeEEEecccccccccchHHHHHHHHHhccCCeEEEEEeC
Q 039518 289 PSSSFEMVHCSRCRVDWHANDGILLKEVDRVLRPNGYFVYSAP 331 (617)
Q Consensus 289 ~d~sFDlV~~s~~l~h~~~d~~~~L~el~RvLrPGG~Liis~p 331 (617)
..++||+|++.....++ +.++.++|+|||.+++..+
T Consensus 159 ~~~~fD~I~~~~~~~~~-------~~~~~~~LkpgG~lv~~~~ 194 (227)
T 2pbf_A 159 ELGLFDAIHVGASASEL-------PEILVDLLAENGKLIIPIE 194 (227)
T ss_dssp HHCCEEEEEECSBBSSC-------CHHHHHHEEEEEEEEEEEE
T ss_pred cCCCcCEEEECCchHHH-------HHHHHHhcCCCcEEEEEEc
Confidence 56789999988765543 4788999999999999875
No 171
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.00 E-value=4.5e-10 Score=110.19 Aligned_cols=102 Identities=14% Similarity=0.165 Sum_probs=75.2
Q ss_pred CCCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHh----CC--CcEEEEecCCC-CCCC-----CCCeeE
Q 039518 228 GVFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALER----GI--GAMISALSTKQ-LPYP-----SSSFEM 295 (617)
Q Consensus 228 ~g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~er----g~--~~~~~~~d~~~-Lpf~-----d~sFDl 295 (617)
++.+|||||||+|..+..+++.......++++|+++.+++.|+++ +. .+.+..+|+.. ++.. .++||+
T Consensus 58 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~l~~~~~~~~~~~fD~ 137 (221)
T 3u81_A 58 SPSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFAGLQDKVTILNGASQDLIPQLKKKYDVDTLDM 137 (221)
T ss_dssp CCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHGGGTTTTSCCCCCSE
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHcCCCCceEEEECCHHHHHHHHHHhcCCCceEE
Confidence 345699999999999999988522123788889999999999875 44 37888887633 3322 268999
Q ss_pred EEecccccccccchHHHHHHHHHhccCCeEEEEEeC
Q 039518 296 VHCSRCRVDWHANDGILLKEVDRVLRPNGYFVYSAP 331 (617)
Q Consensus 296 V~~s~~l~h~~~d~~~~L~el~RvLrPGG~Liis~p 331 (617)
|++.....++. +...++.++ ++|||||++++...
T Consensus 138 V~~d~~~~~~~-~~~~~~~~~-~~LkpgG~lv~~~~ 171 (221)
T 3u81_A 138 VFLDHWKDRYL-PDTLLLEKC-GLLRKGTVLLADNV 171 (221)
T ss_dssp EEECSCGGGHH-HHHHHHHHT-TCCCTTCEEEESCC
T ss_pred EEEcCCcccch-HHHHHHHhc-cccCCCeEEEEeCC
Confidence 99875444443 445677777 99999999998653
No 172
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=98.99 E-value=5.6e-09 Score=110.44 Aligned_cols=132 Identities=12% Similarity=0.044 Sum_probs=97.1
Q ss_pred cCCCCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHhC-----CCcEEEEecCCCCCCCCCCeeEEEecc
Q 039518 226 SAGVFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALERG-----IGAMISALSTKQLPYPSSSFEMVHCSR 300 (617)
Q Consensus 226 ~~~g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~erg-----~~~~~~~~d~~~Lpf~d~sFDlV~~s~ 300 (617)
..+..+|||||||+|.++..++++.+.. .++..|. +.+++.|+++. .++.+..+|+...|.+ .+|+|++.+
T Consensus 177 ~~~~~~v~DvGgG~G~~~~~l~~~~p~~-~~~~~dl-p~v~~~a~~~~~~~~~~rv~~~~gD~~~~~~~--~~D~~~~~~ 252 (353)
T 4a6d_A 177 LSVFPLMCDLGGGAGALAKECMSLYPGC-KITVFDI-PEVVWTAKQHFSFQEEEQIDFQEGDFFKDPLP--EADLYILAR 252 (353)
T ss_dssp GGGCSEEEEETCTTSHHHHHHHHHCSSC-EEEEEEC-HHHHHHHHHHSCC--CCSEEEEESCTTTSCCC--CCSEEEEES
T ss_pred cccCCeEEeeCCCCCHHHHHHHHhCCCc-eeEeccC-HHHHHHHHHhhhhcccCceeeecCccccCCCC--CceEEEeee
Confidence 3455679999999999999999986643 4455676 67788887752 3478888888665554 479999999
Q ss_pred cccccccc-hHHHHHHHHHhccCCeEEEEEeCCCCCCCCCC-----------------hhhHHHHHHHHHHcCceEEEE
Q 039518 301 CRVDWHAN-DGILLKEVDRVLRPNGYFVYSAPPAYRKDKDY-----------------PLIWDKLVNLTTAMCWKLIAR 361 (617)
Q Consensus 301 ~l~h~~~d-~~~~L~el~RvLrPGG~Liis~p~~~~~~~~~-----------------~~~W~~le~La~~~gw~~v~~ 361 (617)
++|+|.++ -..+|+++++.|+|||.++|.+.......... .+.-+++.++++++||+.+..
T Consensus 253 vlh~~~d~~~~~iL~~~~~al~pgg~lli~e~~~~~~~~~~~~~~~~dl~ml~~~~g~ert~~e~~~ll~~AGf~~v~v 331 (353)
T 4a6d_A 253 VLHDWADGKCSHLLERIYHTCKPGGGILVIESLLDEDRRGPLLTQLYSLNMLVQTEGQERTPTHYHMLLSSAGFRDFQF 331 (353)
T ss_dssp SGGGSCHHHHHHHHHHHHHHCCTTCEEEEEECCCCTTSCCCHHHHHHHHHHHHSSSCCCCCHHHHHHHHHHHTCEEEEE
T ss_pred ecccCCHHHHHHHHHHHHhhCCCCCEEEEEEeeeCCCCCCCHHHHHHHHHHHHhCCCcCCCHHHHHHHHHHCCCceEEE
Confidence 99999832 35789999999999999999875332211110 011344788999999998764
No 173
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=98.98 E-value=4.8e-09 Score=100.79 Aligned_cols=114 Identities=13% Similarity=0.025 Sum_probs=83.8
Q ss_pred CCCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHhCCCcEEEEecCCCCCCCCCCeeEEEeccccccccc
Q 039518 228 GVFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALERGIGAMISALSTKQLPYPSSSFEMVHCSRCRVDWHA 307 (617)
Q Consensus 228 ~g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~erg~~~~~~~~d~~~Lpf~d~sFDlV~~s~~l~h~~~ 307 (617)
++.+|||+|||+|.++..+++.+.. .++++|+++.+++.|+++..++.+..+|+..++ ++||+|+++..++++..
T Consensus 51 ~~~~vlD~gcG~G~~~~~l~~~~~~--~v~~vD~~~~~~~~a~~~~~~~~~~~~d~~~~~---~~~D~v~~~~p~~~~~~ 125 (200)
T 1ne2_A 51 GGRSVIDAGTGNGILACGSYLLGAE--SVTAFDIDPDAIETAKRNCGGVNFMVADVSEIS---GKYDTWIMNPPFGSVVK 125 (200)
T ss_dssp BTSEEEEETCTTCHHHHHHHHTTBS--EEEEEESCHHHHHHHHHHCTTSEEEECCGGGCC---CCEEEEEECCCC-----
T ss_pred CCCEEEEEeCCccHHHHHHHHcCCC--EEEEEECCHHHHHHHHHhcCCCEEEECcHHHCC---CCeeEEEECCCchhccC
Confidence 5668999999999999999987532 578899999999999988667889999988875 68999999877766652
Q ss_pred -chHHHHHHHHHhccCCeEEEEEeCCCCCCCCCChhhHHHHHHHHHHcCceEE
Q 039518 308 -NDGILLKEVDRVLRPNGYFVYSAPPAYRKDKDYPLIWDKLVNLTTAMCWKLI 359 (617)
Q Consensus 308 -d~~~~L~el~RvLrPGG~Liis~p~~~~~~~~~~~~W~~le~La~~~gw~~v 359 (617)
....++.++.++| |+ ++++.++ ..+..+.++++..| +..
T Consensus 126 ~~~~~~l~~~~~~~--g~-~~~~~~~---------~~~~~~~~~~~~~g-~~~ 165 (200)
T 1ne2_A 126 HSDRAFIDKAFETS--MW-IYSIGNA---------KARDFLRREFSARG-DVF 165 (200)
T ss_dssp --CHHHHHHHHHHE--EE-EEEEEEG---------GGHHHHHHHHHHHE-EEE
T ss_pred chhHHHHHHHHHhc--Cc-EEEEEcC---------chHHHHHHHHHHCC-CEE
Confidence 2357899999998 55 4444321 11455777788887 433
No 174
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=98.98 E-value=9.3e-10 Score=110.40 Aligned_cols=100 Identities=14% Similarity=0.131 Sum_probs=77.4
Q ss_pred CCCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHh----CC--CcEEEEecCCC-CCCC--CCCeeEEEe
Q 039518 228 GVFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALER----GI--GAMISALSTKQ-LPYP--SSSFEMVHC 298 (617)
Q Consensus 228 ~g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~er----g~--~~~~~~~d~~~-Lpf~--d~sFDlV~~ 298 (617)
++.+|||||||+|..+..|++.......++++|+++.+++.|+++ +. ++.+..+|+.+ ++.. .++||+|++
T Consensus 63 ~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~l~~~~~~~~fD~V~~ 142 (248)
T 3tfw_A 63 QAKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGVDQRVTLREGPALQSLESLGECPAFDLIFI 142 (248)
T ss_dssp TCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHTCCSCCCCSEEEE
T ss_pred CCCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHhcCCCCCeEEEEE
Confidence 445799999999999999998733123788899999999999876 44 47888888644 3332 348999997
Q ss_pred cccccccccchHHHHHHHHHhccCCeEEEEEeC
Q 039518 299 SRCRVDWHANDGILLKEVDRVLRPNGYFVYSAP 331 (617)
Q Consensus 299 s~~l~h~~~d~~~~L~el~RvLrPGG~Liis~p 331 (617)
.. ...+...++.++.++|||||++++...
T Consensus 143 d~----~~~~~~~~l~~~~~~LkpGG~lv~~~~ 171 (248)
T 3tfw_A 143 DA----DKPNNPHYLRWALRYSRPGTLIIGDNV 171 (248)
T ss_dssp CS----CGGGHHHHHHHHHHTCCTTCEEEEECC
T ss_pred CC----chHHHHHHHHHHHHhcCCCeEEEEeCC
Confidence 53 233567799999999999999998764
No 175
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=98.98 E-value=9.2e-10 Score=109.12 Aligned_cols=99 Identities=13% Similarity=0.197 Sum_probs=77.9
Q ss_pred CCCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHh----CC--CcEEEEecCCCC-C-CCCCCeeEEEec
Q 039518 228 GVFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALER----GI--GAMISALSTKQL-P-YPSSSFEMVHCS 299 (617)
Q Consensus 228 ~g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~er----g~--~~~~~~~d~~~L-p-f~d~sFDlV~~s 299 (617)
++.+|||||||+|.++..|++... ...++++|+++.+++.|+++ +. ++.+..+|+... + ..+++||+|++.
T Consensus 71 ~~~~vLDiG~G~G~~~~~la~~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~V~~~ 149 (232)
T 3ntv_A 71 NVKNILEIGTAIGYSSMQFASISD-DIHVTTIERNETMIQYAKQNLATYHFENQVRIIEGNALEQFENVNDKVYDMIFID 149 (232)
T ss_dssp TCCEEEEECCSSSHHHHHHHTTCT-TCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCHHHHTTSCEEEEEEE
T ss_pred CCCEEEEEeCchhHHHHHHHHhCC-CCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhhccCCccEEEEc
Confidence 345699999999999999998533 23788899999999999875 43 578888887553 4 346899999965
Q ss_pred ccccccccchHHHHHHHHHhccCCeEEEEEeC
Q 039518 300 RCRVDWHANDGILLKEVDRVLRPNGYFVYSAP 331 (617)
Q Consensus 300 ~~l~h~~~d~~~~L~el~RvLrPGG~Liis~p 331 (617)
. ...+...++.++.++|||||++++...
T Consensus 150 ~----~~~~~~~~l~~~~~~LkpgG~lv~d~~ 177 (232)
T 3ntv_A 150 A----AKAQSKKFFEIYTPLLKHQGLVITDNV 177 (232)
T ss_dssp T----TSSSHHHHHHHHGGGEEEEEEEEEECT
T ss_pred C----cHHHHHHHHHHHHHhcCCCeEEEEeeC
Confidence 3 234677899999999999999988543
No 176
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=98.98 E-value=6.4e-10 Score=106.59 Aligned_cols=99 Identities=8% Similarity=0.037 Sum_probs=72.2
Q ss_pred CCCCeEEEECCCCcHHHHHhccCCCc-EEEeeecCCcHHHHHHHHHhCCCcEEEEecCCCCC------------------
Q 039518 227 AGVFQVLDVGCGVASFSAFLLPLDIQ-TMSFAPKDGHENQIQFALERGIGAMISALSTKQLP------------------ 287 (617)
Q Consensus 227 ~~g~rVLDIGCGtG~~a~~La~~gv~-~v~v~~iDis~~~lq~A~erg~~~~~~~~d~~~Lp------------------ 287 (617)
.++.+|||+|||+|.++..++++... ...++++|+++.+ ...++.+..+|+..++
T Consensus 21 ~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~------~~~~v~~~~~d~~~~~~~~~~~~~~i~~~~~~~~ 94 (201)
T 2plw_A 21 KKNKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMD------PIPNVYFIQGEIGKDNMNNIKNINYIDNMNNNSV 94 (201)
T ss_dssp CTTEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCC------CCTTCEEEECCTTTTSSCCC-----------CHH
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccC------CCCCceEEEccccchhhhhhccccccccccchhh
Confidence 45678999999999999999886431 2367888888732 1234778888887776
Q ss_pred -------CCCCCeeEEEecccccccc---cch-------HHHHHHHHHhccCCeEEEEEeC
Q 039518 288 -------YPSSSFEMVHCSRCRVDWH---AND-------GILLKEVDRVLRPNGYFVYSAP 331 (617)
Q Consensus 288 -------f~d~sFDlV~~s~~l~h~~---~d~-------~~~L~el~RvLrPGG~Liis~p 331 (617)
+++++||+|+|..+.+... .+. ..++.++.++|||||.|++...
T Consensus 95 ~~~~~~~~~~~~fD~v~~~~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~ 155 (201)
T 2plw_A 95 DYKLKEILQDKKIDIILSDAAVPCIGNKIDDHLNSCELTLSITHFMEQYINIGGTYIVKMY 155 (201)
T ss_dssp HHHHHHHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred HHHHHhhcCCCcccEEEeCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEe
Confidence 5678999999876443211 122 2378999999999999999763
No 177
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=98.95 E-value=7.2e-09 Score=110.40 Aligned_cols=131 Identities=11% Similarity=0.024 Sum_probs=95.7
Q ss_pred CCCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHh----CC-CcEEEEecCCC-CCC-CCCCeeEEEecc
Q 039518 228 GVFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALER----GI-GAMISALSTKQ-LPY-PSSSFEMVHCSR 300 (617)
Q Consensus 228 ~g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~er----g~-~~~~~~~d~~~-Lpf-~d~sFDlV~~s~ 300 (617)
++.+|||+| |+|.++..++..+.. ..++++|+++.+++.|+++ |. ++.+..+|+.. +|. .+++||+|+++.
T Consensus 172 ~~~~VLDlG-G~G~~~~~la~~~~~-~~v~~vDi~~~~l~~a~~~~~~~g~~~v~~~~~D~~~~l~~~~~~~fD~Vi~~~ 249 (373)
T 2qm3_A 172 ENKDIFVLG-DDDLTSIALMLSGLP-KRIAVLDIDERLTKFIEKAANEIGYEDIEIFTFDLRKPLPDYALHKFDTFITDP 249 (373)
T ss_dssp TTCEEEEES-CTTCHHHHHHHHTCC-SEEEEECSCHHHHHHHHHHHHHHTCCCEEEECCCTTSCCCTTTSSCBSEEEECC
T ss_pred CCCEEEEEC-CCCHHHHHHHHhCCC-CEEEEEECCHHHHHHHHHHHHHcCCCCEEEEEChhhhhchhhccCCccEEEECC
Confidence 467899999 999999999887642 2678899999999999876 55 68888889877 764 457899999875
Q ss_pred cccccccchHHHHHHHHHhccCCeE-EEEEeCCCCCCCCCChhhHHHHHHHHH-HcCceEEEEeeeeE
Q 039518 301 CRVDWHANDGILLKEVDRVLRPNGY-FVYSAPPAYRKDKDYPLIWDKLVNLTT-AMCWKLIARKIQTA 366 (617)
Q Consensus 301 ~l~h~~~d~~~~L~el~RvLrPGG~-Liis~p~~~~~~~~~~~~W~~le~La~-~~gw~~v~~~~~~~ 366 (617)
..... ....++.++.++|||||. ++++... .......|..+.+++. ..|+.......+..
T Consensus 250 p~~~~--~~~~~l~~~~~~LkpgG~~~~~~~~~----~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~ 311 (373)
T 2qm3_A 250 PETLE--AIRAFVGRGIATLKGPRCAGYFGITR----RESSLDKWREIQKLLLNEFNVVITDIIRNFN 311 (373)
T ss_dssp CSSHH--HHHHHHHHHHHTBCSTTCEEEEEECT----TTCCHHHHHHHHHHHHHTSCCEEEEEEEEEE
T ss_pred CCchH--HHHHHHHHHHHHcccCCeEEEEEEec----CcCCHHHHHHHHHHHHHhcCcchhhhhhhhh
Confidence 43322 257899999999999994 4665532 1122223566778777 88987765444433
No 178
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=98.95 E-value=8.6e-10 Score=109.20 Aligned_cols=96 Identities=11% Similarity=0.194 Sum_probs=75.0
Q ss_pred CCCCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHh----CC-CcEEEEecCCCCCCCCC-CeeEEEecc
Q 039518 227 AGVFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALER----GI-GAMISALSTKQLPYPSS-SFEMVHCSR 300 (617)
Q Consensus 227 ~~g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~er----g~-~~~~~~~d~~~Lpf~d~-sFDlV~~s~ 300 (617)
.++.+|||||||+|.++..+++... ..++++|+++.+++.|+++ +. ++.+..+|. ..+++++ .||+|++..
T Consensus 90 ~~~~~vLdiG~G~G~~~~~la~~~~--~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~-~~~~~~~~~fD~Ii~~~ 166 (235)
T 1jg1_A 90 KPGMNILEVGTGSGWNAALISEIVK--TDVYTIERIPELVEFAKRNLERAGVKNVHVILGDG-SKGFPPKAPYDVIIVTA 166 (235)
T ss_dssp CTTCCEEEECCTTSHHHHHHHHHHC--SCEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCG-GGCCGGGCCEEEEEECS
T ss_pred CCCCEEEEEeCCcCHHHHHHHHHhC--CEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEECCc-ccCCCCCCCccEEEECC
Confidence 4556799999999999999988753 3677889999999999875 33 467777776 4455544 499999987
Q ss_pred cccccccchHHHHHHHHHhccCCeEEEEEeCC
Q 039518 301 CRVDWHANDGILLKEVDRVLRPNGYFVYSAPP 332 (617)
Q Consensus 301 ~l~h~~~d~~~~L~el~RvLrPGG~Liis~p~ 332 (617)
++.++. .++.++|+|||.++++.++
T Consensus 167 ~~~~~~-------~~~~~~L~pgG~lvi~~~~ 191 (235)
T 1jg1_A 167 GAPKIP-------EPLIEQLKIGGKLIIPVGS 191 (235)
T ss_dssp BBSSCC-------HHHHHTEEEEEEEEEEECS
T ss_pred cHHHHH-------HHHHHhcCCCcEEEEEEec
Confidence 766554 3789999999999999863
No 179
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=98.95 E-value=3.7e-10 Score=112.93 Aligned_cols=97 Identities=13% Similarity=0.116 Sum_probs=76.2
Q ss_pred CCeEEEECCCCcHHHHHhccC----CCcEEEeeecCCcHHHHHHHHHhCCCcEEEEecCCCC---CCCC-CCeeEEEecc
Q 039518 229 VFQVLDVGCGVASFSAFLLPL----DIQTMSFAPKDGHENQIQFALERGIGAMISALSTKQL---PYPS-SSFEMVHCSR 300 (617)
Q Consensus 229 g~rVLDIGCGtG~~a~~La~~----gv~~v~v~~iDis~~~lq~A~erg~~~~~~~~d~~~L---pf~d-~sFDlV~~s~ 300 (617)
+.+|||||||+|..+..|++. +. ...++++|+++.+++.|+....++.+..+|...+ ++.+ .+||+|++..
T Consensus 82 ~~~VLDiG~GtG~~t~~la~~~~~~~~-~~~V~gvD~s~~~l~~a~~~~~~v~~~~gD~~~~~~l~~~~~~~fD~I~~d~ 160 (236)
T 2bm8_A 82 PRTIVELGVYNGGSLAWFRDLTKIMGI-DCQVIGIDRDLSRCQIPASDMENITLHQGDCSDLTTFEHLREMAHPLIFIDN 160 (236)
T ss_dssp CSEEEEECCTTSHHHHHHHHHHHHTTC-CCEEEEEESCCTTCCCCGGGCTTEEEEECCSSCSGGGGGGSSSCSSEEEEES
T ss_pred CCEEEEEeCCCCHHHHHHHHhhhhcCC-CCEEEEEeCChHHHHHHhccCCceEEEECcchhHHHHHhhccCCCCEEEECC
Confidence 346999999999999999875 22 2367888999999888775455688899998774 5444 4799999764
Q ss_pred cccccccchHHHHHHHHH-hccCCeEEEEEe
Q 039518 301 CRVDWHANDGILLKEVDR-VLRPNGYFVYSA 330 (617)
Q Consensus 301 ~l~h~~~d~~~~L~el~R-vLrPGG~Liis~ 330 (617)
. | .+...++.++.| +|||||++++.+
T Consensus 161 ~--~--~~~~~~l~~~~r~~LkpGG~lv~~d 187 (236)
T 2bm8_A 161 A--H--ANTFNIMKWAVDHLLEEGDYFIIED 187 (236)
T ss_dssp S--C--SSHHHHHHHHHHHTCCTTCEEEECS
T ss_pred c--h--HhHHHHHHHHHHhhCCCCCEEEEEe
Confidence 3 3 367789999998 999999999965
No 180
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=98.95 E-value=1e-09 Score=109.58 Aligned_cols=104 Identities=13% Similarity=0.082 Sum_probs=77.1
Q ss_pred CCCeEEEECCCCcHHHHHhccCC-CcEEEeeecCCcHHHHHHHHHh---C----C--C----------------------
Q 039518 228 GVFQVLDVGCGVASFSAFLLPLD-IQTMSFAPKDGHENQIQFALER---G----I--G---------------------- 275 (617)
Q Consensus 228 ~g~rVLDIGCGtG~~a~~La~~g-v~~v~v~~iDis~~~lq~A~er---g----~--~---------------------- 275 (617)
++.+|||+|||+|.++..+++.. .....++++|+++.+++.|+++ . + .
T Consensus 51 ~~~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~~~l~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (250)
T 1o9g_A 51 GPVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPAPLELAAKNLALLSPAGLTARELERREQSERFGKPSYLEAAQA 130 (250)
T ss_dssp SCEEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
T ss_pred CCCeEEECCCCCCHHHHHHHHHhccCCCeEEEEECCHHHHHHHHHHHHHhhhccccccchhhhhhhhhcccccchhhhhh
Confidence 45679999999999999998761 1234789999999999999864 1 1 1
Q ss_pred ---cE-------------EEEecCCCCCC-----CCCCeeEEEecccccccc--------cchHHHHHHHHHhccCCeEE
Q 039518 276 ---AM-------------ISALSTKQLPY-----PSSSFEMVHCSRCRVDWH--------ANDGILLKEVDRVLRPNGYF 326 (617)
Q Consensus 276 ---~~-------------~~~~d~~~Lpf-----~d~sFDlV~~s~~l~h~~--------~d~~~~L~el~RvLrPGG~L 326 (617)
+. +..+|+..... ..++||+|+|+..+++.. +....++.++.++|+|||++
T Consensus 131 ~~~v~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~fD~Iv~npp~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l 210 (250)
T 1o9g_A 131 ARRLRERLTAEGGALPCAIRTADVFDPRALSAVLAGSAPDVVLTDLPYGERTHWEGQVPGQPVAGLLRSLASALPAHAVI 210 (250)
T ss_dssp HHHHHHHHHHTTSSCCEEEEECCTTCGGGHHHHHTTCCCSEEEEECCGGGSSSSSSCCCHHHHHHHHHHHHHHSCTTCEE
T ss_pred hhhhhhhccccccccccceeecccccccccccccCCCCceEEEeCCCeeccccccccccccHHHHHHHHHHHhcCCCcEE
Confidence 44 77788755321 345899999986554433 22457999999999999999
Q ss_pred EEEeC
Q 039518 327 VYSAP 331 (617)
Q Consensus 327 iis~p 331 (617)
+++..
T Consensus 211 ~~~~~ 215 (250)
T 1o9g_A 211 AVTDR 215 (250)
T ss_dssp EEEES
T ss_pred EEeCc
Confidence 99654
No 181
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=98.95 E-value=2.9e-09 Score=108.67 Aligned_cols=124 Identities=13% Similarity=0.108 Sum_probs=89.3
Q ss_pred CCCCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHh----CC-CcEEEEecCCCCCCCCCCeeEEEeccc
Q 039518 227 AGVFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALER----GI-GAMISALSTKQLPYPSSSFEMVHCSRC 301 (617)
Q Consensus 227 ~~g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~er----g~-~~~~~~~d~~~Lpf~d~sFDlV~~s~~ 301 (617)
.++.+|||+|||+|.++..++++.. ...+.++|+++.+++.|+++ ++ ++.+..+|+.+++. .++||+|++...
T Consensus 118 ~~~~~VLDlgcG~G~~s~~la~~~~-~~~V~~vD~s~~av~~a~~n~~~n~l~~~~~~~~d~~~~~~-~~~~D~Vi~d~p 195 (272)
T 3a27_A 118 NENEVVVDMFAGIGYFTIPLAKYSK-PKLVYAIEKNPTAYHYLCENIKLNKLNNVIPILADNRDVEL-KDVADRVIMGYV 195 (272)
T ss_dssp CTTCEEEETTCTTTTTHHHHHHHTC-CSEEEEEECCHHHHHHHHHHHHHTTCSSEEEEESCGGGCCC-TTCEEEEEECCC
T ss_pred CCCCEEEEecCcCCHHHHHHHHhCC-CCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEECChHHcCc-cCCceEEEECCc
Confidence 4667899999999999999998743 23678889999999988875 43 56788888877744 678999998743
Q ss_pred ccccccchHHHHHHHHHhccCCeEEEEEeCCCCCCCCCChhhHHHHHHHHHHcCceEE
Q 039518 302 RVDWHANDGILLKEVDRVLRPNGYFVYSAPPAYRKDKDYPLIWDKLVNLTTAMCWKLI 359 (617)
Q Consensus 302 l~h~~~d~~~~L~el~RvLrPGG~Liis~p~~~~~~~~~~~~W~~le~La~~~gw~~v 359 (617)
. +...++.++.++|+|||.++++.........+ ...+.++.+.+..+++..
T Consensus 196 ~-----~~~~~l~~~~~~LkpgG~l~~s~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 246 (272)
T 3a27_A 196 H-----KTHKFLDKTFEFLKDRGVIHYHETVAEKIMYE--RPIERLKFYAEKNGYKLI 246 (272)
T ss_dssp S-----SGGGGHHHHHHHEEEEEEEEEEEEEEGGGTTT--HHHHHHHHHHHHTTEEEE
T ss_pred c-----cHHHHHHHHHHHcCCCCEEEEEEcCccccccc--cHHHHHHHHHHHhCCeeE
Confidence 2 56678999999999999999987532211111 112335555555565543
No 182
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=98.94 E-value=1e-09 Score=115.57 Aligned_cols=126 Identities=10% Similarity=0.058 Sum_probs=87.8
Q ss_pred CCCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHh----CCC---cEEEEecCCCCCC----CCCCeeEE
Q 039518 228 GVFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALER----GIG---AMISALSTKQLPY----PSSSFEMV 296 (617)
Q Consensus 228 ~g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~er----g~~---~~~~~~d~~~Lpf----~d~sFDlV 296 (617)
++.+|||+|||+|.++..+++.+. .++++|+++.+++.|+++ ++. +.+..+|+.++.. ..++||+|
T Consensus 153 ~~~~VLDlgcGtG~~sl~la~~ga---~V~~VD~s~~al~~a~~n~~~~gl~~~~v~~i~~D~~~~l~~~~~~~~~fD~I 229 (332)
T 2igt_A 153 RPLKVLNLFGYTGVASLVAAAAGA---EVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDAMKFIQREERRGSTYDII 229 (332)
T ss_dssp SCCEEEEETCTTCHHHHHHHHTTC---EEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHHHHHHHHHHHTCCBSEE
T ss_pred CCCcEEEcccccCHHHHHHHHcCC---EEEEEECCHHHHHHHHHHHHHcCCCccceEEEECcHHHHHHHHHhcCCCceEE
Confidence 455799999999999999998875 678889999999998875 442 6777777655421 15689999
Q ss_pred Eecccc---------cccccchHHHHHHHHHhccCCeEEEEEeCCCCCCCCCChhhHHH-HHHHHHHcCceEE
Q 039518 297 HCSRCR---------VDWHANDGILLKEVDRVLRPNGYFVYSAPPAYRKDKDYPLIWDK-LVNLTTAMCWKLI 359 (617)
Q Consensus 297 ~~s~~l---------~h~~~d~~~~L~el~RvLrPGG~Liis~p~~~~~~~~~~~~W~~-le~La~~~gw~~v 359 (617)
++.... .++..+...++.++.++|+|||+++++....... ....+.. +.+.++..|+++.
T Consensus 230 i~dPP~~~~~~~~~~~~~~~~~~~ll~~~~~~LkpgG~lli~~~~~~~~---~~~~~~~~l~~a~~~~g~~v~ 299 (332)
T 2igt_A 230 LTDPPKFGRGTHGEVWQLFDHLPLMLDICREILSPKALGLVLTAYSIRA---SFYSMHELMRETMRGAGGVVA 299 (332)
T ss_dssp EECCCSEEECTTCCEEEHHHHHHHHHHHHHHTBCTTCCEEEEEECCTTS---CHHHHHHHHHHHTTTSCSEEE
T ss_pred EECCccccCCchHHHHHHHHHHHHHHHHHHHhcCcCcEEEEEECCCCCC---CHHHHHHHHHHHHHHcCCeEE
Confidence 984321 1223356789999999999999988876432211 1111222 4445557787765
No 183
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=98.94 E-value=1.7e-09 Score=114.16 Aligned_cols=122 Identities=15% Similarity=0.002 Sum_probs=90.8
Q ss_pred CCCCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHh----CC-CcEEEEecCCCCCCCCCCeeEEEeccc
Q 039518 227 AGVFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALER----GI-GAMISALSTKQLPYPSSSFEMVHCSRC 301 (617)
Q Consensus 227 ~~g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~er----g~-~~~~~~~d~~~Lpf~d~sFDlV~~s~~ 301 (617)
.++.+|||+|||+|.++..++........+.++|+++.+++.|+++ ++ .+.+..+|+.+++.+.+.||+|+++..
T Consensus 202 ~~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~~g~~~i~~~~~D~~~~~~~~~~~D~Ii~npP 281 (354)
T 3tma_A 202 RPGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALASGLSWIRFLRADARHLPRFFPEVDRILANPP 281 (354)
T ss_dssp CTTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHHTTCTTCEEEECCGGGGGGTCCCCSEEEECCC
T ss_pred CCCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHHHcCCCceEEEeCChhhCccccCCCCEEEECCC
Confidence 3556799999999999999988641112678889999999999876 44 588999999998877788999998643
Q ss_pred ccccc-------cchHHHHHHHHHhccCCeEEEEEeCCCCCCCCCChhhHHHHHHHHHHcCceEEE
Q 039518 302 RVDWH-------ANDGILLKEVDRVLRPNGYFVYSAPPAYRKDKDYPLIWDKLVNLTTAMCWKLIA 360 (617)
Q Consensus 302 l~h~~-------~d~~~~L~el~RvLrPGG~Liis~p~~~~~~~~~~~~W~~le~La~~~gw~~v~ 360 (617)
..... .....++.++.++|+|||.+++.++. ...+..+.+ .||+...
T Consensus 282 yg~r~~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~t~~-----------~~~~~~~~~-~g~~~~~ 335 (354)
T 3tma_A 282 HGLRLGRKEGLFHLYWDFLRGALALLPPGGRVALLTLR-----------PALLKRALP-PGFALRH 335 (354)
T ss_dssp SCC----CHHHHHHHHHHHHHHHHTSCTTCEEEEEESC-----------HHHHHHHCC-TTEEEEE
T ss_pred CcCccCCcccHHHHHHHHHHHHHHhcCCCcEEEEEeCC-----------HHHHHHHhh-cCcEEEE
Confidence 22111 11267899999999999999998862 122445555 7887654
No 184
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=98.94 E-value=7e-10 Score=109.87 Aligned_cols=98 Identities=11% Similarity=0.080 Sum_probs=74.8
Q ss_pred CCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHh----CC---CcEEEEecCCCC-C-CCCCCeeEEEec
Q 039518 229 VFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALER----GI---GAMISALSTKQL-P-YPSSSFEMVHCS 299 (617)
Q Consensus 229 g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~er----g~---~~~~~~~d~~~L-p-f~d~sFDlV~~s 299 (617)
+.+|||||||+|..+..|++.-.....++++|+++.+++.|+++ +. ++.+..+|+.++ + +++++||+|++.
T Consensus 57 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~gda~~~l~~~~~~~fD~V~~d 136 (221)
T 3dr5_A 57 STGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAGYSPSRVRFLLSRPLDVMSRLANDSYQLVFGQ 136 (221)
T ss_dssp CCEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHGGGSCTTCEEEEEEC
T ss_pred CCCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEEcCHHHHHHHhcCCCcCeEEEc
Confidence 34799999999999999987522123688899999999999875 44 377777775443 2 346899999975
Q ss_pred ccccccccchHHHHHHHHHhccCCeEEEEEe
Q 039518 300 RCRVDWHANDGILLKEVDRVLRPNGYFVYSA 330 (617)
Q Consensus 300 ~~l~h~~~d~~~~L~el~RvLrPGG~Liis~ 330 (617)
. ...+...++.++.++|||||++++..
T Consensus 137 ~----~~~~~~~~l~~~~~~LkpGG~lv~dn 163 (221)
T 3dr5_A 137 V----SPMDLKALVDAAWPLLRRGGALVLAD 163 (221)
T ss_dssp C----CTTTHHHHHHHHHHHEEEEEEEEETT
T ss_pred C----cHHHHHHHHHHHHHHcCCCcEEEEeC
Confidence 3 23356679999999999999999954
No 185
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=98.94 E-value=4.8e-09 Score=111.88 Aligned_cols=120 Identities=13% Similarity=0.025 Sum_probs=89.9
Q ss_pred CCCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHh----CC--CcEEEEecCCCCCCCCCCeeEEEeccc
Q 039518 228 GVFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALER----GI--GAMISALSTKQLPYPSSSFEMVHCSRC 301 (617)
Q Consensus 228 ~g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~er----g~--~~~~~~~d~~~Lpf~d~sFDlV~~s~~ 301 (617)
++.+|||+|||+|.++..++..+... .+.++|+++.+++.|+++ |+ .+.+..+|+.++++++++||+|+++..
T Consensus 217 ~~~~vLD~gCGsG~~~i~~a~~~~~~-~v~g~Dis~~~l~~A~~n~~~~gl~~~i~~~~~D~~~~~~~~~~fD~Ii~npP 295 (373)
T 3tm4_A 217 DGGSVLDPMCGSGTILIELALRRYSG-EIIGIEKYRKHLIGAEMNALAAGVLDKIKFIQGDATQLSQYVDSVDFAISNLP 295 (373)
T ss_dssp CSCCEEETTCTTCHHHHHHHHTTCCS-CEEEEESCHHHHHHHHHHHHHTTCGGGCEEEECCGGGGGGTCSCEEEEEEECC
T ss_pred CCCEEEEccCcCcHHHHHHHHhCCCC-eEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhhCCcccCCcCEEEECCC
Confidence 45679999999999999999886521 577889999999999876 55 688999999999988889999999743
Q ss_pred ccccc------cc-hHHHHHHHHHhccCCeEEEEEeCCCCCCCCCChhhHHHHHHHHHHcCceEEEE
Q 039518 302 RVDWH------AN-DGILLKEVDRVLRPNGYFVYSAPPAYRKDKDYPLIWDKLVNLTTAMCWKLIAR 361 (617)
Q Consensus 302 l~h~~------~d-~~~~L~el~RvLrPGG~Liis~p~~~~~~~~~~~~W~~le~La~~~gw~~v~~ 361 (617)
..... .+ ...++.++.++| ||.+++..+. ...+++.+.+.||+....
T Consensus 296 yg~r~~~~~~~~~ly~~~~~~l~r~l--~g~~~~i~~~-----------~~~~~~~~~~~G~~~~~~ 349 (373)
T 3tm4_A 296 YGLKIGKKSMIPDLYMKFFNELAKVL--EKRGVFITTE-----------KKAIEEAIAENGFEIIHH 349 (373)
T ss_dssp CC------CCHHHHHHHHHHHHHHHE--EEEEEEEESC-----------HHHHHHHHHHTTEEEEEE
T ss_pred CCcccCcchhHHHHHHHHHHHHHHHc--CCeEEEEECC-----------HHHHHHHHHHcCCEEEEE
Confidence 22211 11 256889999999 4555554431 345778888999997653
No 186
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=98.93 E-value=9.5e-10 Score=115.01 Aligned_cols=99 Identities=16% Similarity=0.074 Sum_probs=75.1
Q ss_pred cCCCCeEEEECCCCcHHHHHhccC-CCcEEEeeecCCcHHHHHHHHHhC----------------CCcEEEEecCCCC--
Q 039518 226 SAGVFQVLDVGCGVASFSAFLLPL-DIQTMSFAPKDGHENQIQFALERG----------------IGAMISALSTKQL-- 286 (617)
Q Consensus 226 ~~~g~rVLDIGCGtG~~a~~La~~-gv~~v~v~~iDis~~~lq~A~erg----------------~~~~~~~~d~~~L-- 286 (617)
+.++.+|||+|||+|.++..+++. +... .+.++|+++.+++.|+++. .++.+..+|+..+
T Consensus 103 ~~~g~~VLDiG~G~G~~~~~la~~~g~~~-~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~~d~~~~~~ 181 (336)
T 2b25_A 103 INPGDTVLEAGSGSGGMSLFLSKAVGSQG-RVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKDISGATE 181 (336)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTC-EEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEESCTTCCC-
T ss_pred CCCCCEEEEeCCCcCHHHHHHHHHhCCCc-eEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEEECChHHccc
Confidence 346778999999999999999886 4322 6788899999999998752 3578888888776
Q ss_pred CCCCCCeeEEEecccccccccchHHHHHHHHHhccCCeEEEEEeC
Q 039518 287 PYPSSSFEMVHCSRCRVDWHANDGILLKEVDRVLRPNGYFVYSAP 331 (617)
Q Consensus 287 pf~d~sFDlV~~s~~l~h~~~d~~~~L~el~RvLrPGG~Liis~p 331 (617)
++++++||+|++.. .++..++.++.++|+|||.+++..+
T Consensus 182 ~~~~~~fD~V~~~~------~~~~~~l~~~~~~LkpgG~lv~~~~ 220 (336)
T 2b25_A 182 DIKSLTFDAVALDM------LNPHVTLPVFYPHLKHGGVCAVYVV 220 (336)
T ss_dssp ------EEEEEECS------SSTTTTHHHHGGGEEEEEEEEEEES
T ss_pred ccCCCCeeEEEECC------CCHHHHHHHHHHhcCCCcEEEEEeC
Confidence 56677899999753 1344589999999999999999875
No 187
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=98.93 E-value=1.1e-09 Score=107.75 Aligned_cols=97 Identities=14% Similarity=0.186 Sum_probs=75.5
Q ss_pred CCCCeEEEECCCCcHHHHHhccCCCc-----EEEeeecCCcHHHHHHHHHhC----------CCcEEEEecCCCCCCCC-
Q 039518 227 AGVFQVLDVGCGVASFSAFLLPLDIQ-----TMSFAPKDGHENQIQFALERG----------IGAMISALSTKQLPYPS- 290 (617)
Q Consensus 227 ~~g~rVLDIGCGtG~~a~~La~~gv~-----~v~v~~iDis~~~lq~A~erg----------~~~~~~~~d~~~Lpf~d- 290 (617)
.++.+|||||||+|.++..+++.... ...++++|+++.+++.|+++. .++.+..+|... ++++
T Consensus 83 ~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~-~~~~~ 161 (227)
T 1r18_A 83 KPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRK-GYPPN 161 (227)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGGG-CCGGG
T ss_pred CCCCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEEECCccc-CCCcC
Confidence 46678999999999999999874211 026788899999999988752 357788888765 4554
Q ss_pred CCeeEEEecccccccccchHHHHHHHHHhccCCeEEEEEeC
Q 039518 291 SSFEMVHCSRCRVDWHANDGILLKEVDRVLRPNGYFVYSAP 331 (617)
Q Consensus 291 ~sFDlV~~s~~l~h~~~d~~~~L~el~RvLrPGG~Liis~p 331 (617)
++||+|++...+.+.. .++.++|||||.+++...
T Consensus 162 ~~fD~I~~~~~~~~~~-------~~~~~~LkpgG~lvi~~~ 195 (227)
T 1r18_A 162 APYNAIHVGAAAPDTP-------TELINQLASGGRLIVPVG 195 (227)
T ss_dssp CSEEEEEECSCBSSCC-------HHHHHTEEEEEEEEEEES
T ss_pred CCccEEEECCchHHHH-------HHHHHHhcCCCEEEEEEe
Confidence 7899999887665543 688999999999999875
No 188
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=98.92 E-value=9.1e-10 Score=107.56 Aligned_cols=100 Identities=15% Similarity=0.118 Sum_probs=76.1
Q ss_pred CCCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHh----CC--CcEEEEecCCCC-CC-C----CCCeeE
Q 039518 228 GVFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALER----GI--GAMISALSTKQL-PY-P----SSSFEM 295 (617)
Q Consensus 228 ~g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~er----g~--~~~~~~~d~~~L-pf-~----d~sFDl 295 (617)
++.+|||||||+|.++..|++.......++++|+++.+++.|+++ +. .+.+..+|+... +. . .++||+
T Consensus 64 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD~ 143 (225)
T 3tr6_A 64 QAKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGLSDKIGLRLSPAKDTLAELIHAGQAWQYDL 143 (225)
T ss_dssp TCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHTTTCTTCEEE
T ss_pred CCCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEeCCHHHHHHHhhhccCCCCccE
Confidence 345699999999999999998732123788899999999998876 43 377888776332 21 1 178999
Q ss_pred EEecccccccccchHHHHHHHHHhccCCeEEEEEeC
Q 039518 296 VHCSRCRVDWHANDGILLKEVDRVLRPNGYFVYSAP 331 (617)
Q Consensus 296 V~~s~~l~h~~~d~~~~L~el~RvLrPGG~Liis~p 331 (617)
|++.. ...+...++.++.++|||||++++...
T Consensus 144 v~~~~----~~~~~~~~l~~~~~~L~pgG~lv~~~~ 175 (225)
T 3tr6_A 144 IYIDA----DKANTDLYYEESLKLLREGGLIAVDNV 175 (225)
T ss_dssp EEECS----CGGGHHHHHHHHHHHEEEEEEEEEECS
T ss_pred EEECC----CHHHHHHHHHHHHHhcCCCcEEEEeCC
Confidence 99643 234677899999999999999999764
No 189
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=98.92 E-value=1.3e-09 Score=105.84 Aligned_cols=97 Identities=12% Similarity=0.081 Sum_probs=75.2
Q ss_pred CCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHh----CC--CcEEEEecCCC-CCCCCCCeeEEEeccc
Q 039518 229 VFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALER----GI--GAMISALSTKQ-LPYPSSSFEMVHCSRC 301 (617)
Q Consensus 229 g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~er----g~--~~~~~~~d~~~-Lpf~d~sFDlV~~s~~ 301 (617)
+.+|||||||+|..+..+++.......++++|+++.+++.|+++ +. .+.+..+|..+ ++..++ ||+|++..
T Consensus 57 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~-fD~v~~~~- 134 (210)
T 3c3p_A 57 PQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDNGLIDRVELQVGDPLGIAAGQRD-IDILFMDC- 134 (210)
T ss_dssp CSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHSGGGGEEEEESCHHHHHTTCCS-EEEEEEET-
T ss_pred CCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCceEEEEEecHHHHhccCCC-CCEEEEcC-
Confidence 34699999999999999988632123778889999999998865 33 36777877644 354456 99999763
Q ss_pred ccccccchHHHHHHHHHhccCCeEEEEEe
Q 039518 302 RVDWHANDGILLKEVDRVLRPNGYFVYSA 330 (617)
Q Consensus 302 l~h~~~d~~~~L~el~RvLrPGG~Liis~ 330 (617)
...+...++.++.++|||||++++..
T Consensus 135 ---~~~~~~~~l~~~~~~LkpgG~lv~~~ 160 (210)
T 3c3p_A 135 ---DVFNGADVLERMNRCLAKNALLIAVN 160 (210)
T ss_dssp ---TTSCHHHHHHHHGGGEEEEEEEEEES
T ss_pred ---ChhhhHHHHHHHHHhcCCCeEEEEEC
Confidence 13467889999999999999999864
No 190
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=98.91 E-value=1.6e-09 Score=110.44 Aligned_cols=128 Identities=12% Similarity=0.062 Sum_probs=88.9
Q ss_pred CCCCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHh----CC-CcEEEEecCCCCCC----CCCCeeEEE
Q 039518 227 AGVFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALER----GI-GAMISALSTKQLPY----PSSSFEMVH 297 (617)
Q Consensus 227 ~~g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~er----g~-~~~~~~~d~~~Lpf----~d~sFDlV~ 297 (617)
.++.+|||+|||+|..+..+++.......++++|+++.+++.++++ +. ++.+..+|+..++. .+++||+|+
T Consensus 82 ~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~~fD~Vl 161 (274)
T 3ajd_A 82 REDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRMGVLNTIIINADMRKYKDYLLKNEIFFDKIL 161 (274)
T ss_dssp CTTCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHHTTCCEEEEE
T ss_pred CCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHhCCCcEEEEeCChHhcchhhhhccccCCEEE
Confidence 4567899999999999999987422223678889999999988775 54 57788888766653 267899999
Q ss_pred eccccc-----------------ccccchHHHHHHHHHhccCCeEEEEEeCCCCCCCCCChhhHHHHHHHHHH-cCceEE
Q 039518 298 CSRCRV-----------------DWHANDGILLKEVDRVLRPNGYFVYSAPPAYRKDKDYPLIWDKLVNLTTA-MCWKLI 359 (617)
Q Consensus 298 ~s~~l~-----------------h~~~d~~~~L~el~RvLrPGG~Liis~p~~~~~~~~~~~~W~~le~La~~-~gw~~v 359 (617)
+.-... +.......+|.++.++|||||.+++++...... ++. +.+..++++ .+|+++
T Consensus 162 ~d~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~stcs~~~~--ene---~~v~~~l~~~~~~~~~ 236 (274)
T 3ajd_A 162 LDAPCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKKDGELVYSTCSMEVE--ENE---EVIKYILQKRNDVELI 236 (274)
T ss_dssp EEECCC------------HHHHTGGGTCHHHHHHHHHHHEEEEEEEEEEESCCCTT--SSH---HHHHHHHHHCSSEEEE
T ss_pred EcCCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEECCCChH--HhH---HHHHHHHHhCCCcEEe
Confidence 751110 111345789999999999999999998644332 222 235555544 345544
No 191
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=98.91 E-value=3.9e-09 Score=115.35 Aligned_cols=130 Identities=13% Similarity=0.138 Sum_probs=91.1
Q ss_pred cCCCCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHh----CC-CcEEEEecCCCCC--CCCCCeeEEEe
Q 039518 226 SAGVFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALER----GI-GAMISALSTKQLP--YPSSSFEMVHC 298 (617)
Q Consensus 226 ~~~g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~er----g~-~~~~~~~d~~~Lp--f~d~sFDlV~~ 298 (617)
..++.+|||+|||+|..+..+++.......++++|+++.+++.++++ |. ++.+..+|+..++ +++++||+|++
T Consensus 257 ~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~fD~Vl~ 336 (450)
T 2yxl_A 257 PKPGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRMGIKIVKPLVKDARKAPEIIGEEVADKVLL 336 (450)
T ss_dssp CCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCTTCCSSSSCSSCEEEEEE
T ss_pred CCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCCCcEEEEEcChhhcchhhccCCCCEEEE
Confidence 34667899999999999999987532212678889999999888776 55 5778888887776 55578999995
Q ss_pred c-----ccccccccch----------------HHHHHHHHHhccCCeEEEEEeCCCCCCCCCChhhHHHHHHHHHHc-Cc
Q 039518 299 S-----RCRVDWHAND----------------GILLKEVDRVLRPNGYFVYSAPPAYRKDKDYPLIWDKLVNLTTAM-CW 356 (617)
Q Consensus 299 s-----~~l~h~~~d~----------------~~~L~el~RvLrPGG~Liis~p~~~~~~~~~~~~W~~le~La~~~-gw 356 (617)
. ...++-.++. ..+|.++.++|||||.+++++...... ++ -+.+..++++. +|
T Consensus 337 D~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvy~tcs~~~~--en---e~~v~~~l~~~~~~ 411 (450)
T 2yxl_A 337 DAPCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVKPGGRLLYTTCSIFKE--EN---EKNIRWFLNVHPEF 411 (450)
T ss_dssp ECCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCCCGG--GT---HHHHHHHHHHCSSC
T ss_pred cCCCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCChh--hH---HHHHHHHHHhCCCC
Confidence 1 1111111111 568999999999999999988644321 11 23466666665 67
Q ss_pred eEEE
Q 039518 357 KLIA 360 (617)
Q Consensus 357 ~~v~ 360 (617)
+.+.
T Consensus 412 ~~~~ 415 (450)
T 2yxl_A 412 KLVP 415 (450)
T ss_dssp EECC
T ss_pred EEee
Confidence 6553
No 192
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=98.91 E-value=1.4e-09 Score=118.48 Aligned_cols=103 Identities=7% Similarity=-0.060 Sum_probs=76.5
Q ss_pred cCCCCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHH-------HHh----C---CCcEEEEecCCCC--CC-
Q 039518 226 SAGVFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFA-------LER----G---IGAMISALSTKQL--PY- 288 (617)
Q Consensus 226 ~~~g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A-------~er----g---~~~~~~~~d~~~L--pf- 288 (617)
+.++.+|||||||+|.++..+++.... ..+.++|+++.+++.| +++ | .++.+..++.... ++
T Consensus 240 l~~g~~VLDLGCGsG~la~~LA~~~g~-~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~~~nV~~i~gD~~~~~~~~~ 318 (433)
T 1u2z_A 240 LKKGDTFMDLGSGVGNCVVQAALECGC-ALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFSLKKSFVDNNRVA 318 (433)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHHCC-SEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEEESSCSTTCHHHH
T ss_pred CCCCCEEEEeCCCcCHHHHHHHHHCCC-CEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCCCCceEEEEcCccccccccc
Confidence 356778999999999999999886221 2678889999988877 543 4 3466666643322 22
Q ss_pred -CCCCeeEEEecccccccccchHHHHHHHHHhccCCeEEEEEeC
Q 039518 289 -PSSSFEMVHCSRCRVDWHANDGILLKEVDRVLRPNGYFVYSAP 331 (617)
Q Consensus 289 -~d~sFDlV~~s~~l~h~~~d~~~~L~el~RvLrPGG~Liis~p 331 (617)
..++||+|+++..+ +.++...+|.++.++|||||.+++..+
T Consensus 319 ~~~~~FDvIvvn~~l--~~~d~~~~L~el~r~LKpGG~lVi~d~ 360 (433)
T 1u2z_A 319 ELIPQCDVILVNNFL--FDEDLNKKVEKILQTAKVGCKIISLKS 360 (433)
T ss_dssp HHGGGCSEEEECCTT--CCHHHHHHHHHHHTTCCTTCEEEESSC
T ss_pred cccCCCCEEEEeCcc--ccccHHHHHHHHHHhCCCCeEEEEeec
Confidence 24789999987654 334777889999999999999999754
No 193
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=98.90 E-value=4.8e-08 Score=93.99 Aligned_cols=120 Identities=12% Similarity=0.039 Sum_probs=89.0
Q ss_pred CCCCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHh----CCCcEEEEecCCCCCCCCCCeeEEEecccc
Q 039518 227 AGVFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALER----GIGAMISALSTKQLPYPSSSFEMVHCSRCR 302 (617)
Q Consensus 227 ~~g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~er----g~~~~~~~~d~~~Lpf~d~sFDlV~~s~~l 302 (617)
.++.+|||+|||+|.++..+++.+.. .++++|+++.+++.|+++ +.++.+..+|+..++ ++||+|+++...
T Consensus 48 ~~~~~vlD~g~G~G~~~~~l~~~~~~--~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~---~~~D~v~~~~p~ 122 (207)
T 1wy7_A 48 IEGKVVADLGAGTGVLSYGALLLGAK--EVICVEVDKEAVDVLIENLGEFKGKFKVFIGDVSEFN---SRVDIVIMNPPF 122 (207)
T ss_dssp STTCEEEEETCTTCHHHHHHHHTTCS--EEEEEESCHHHHHHHHHHTGGGTTSEEEEESCGGGCC---CCCSEEEECCCC
T ss_pred CCcCEEEEeeCCCCHHHHHHHHcCCC--EEEEEECCHHHHHHHHHHHHHcCCCEEEEECchHHcC---CCCCEEEEcCCC
Confidence 35668999999999999999988643 678899999999999886 336788888888775 489999998665
Q ss_pred cccc-cchHHHHHHHHHhccCCeEEEEEeCCCCCCCCCChhhHHHHHHHHHHcCceEEEE
Q 039518 303 VDWH-ANDGILLKEVDRVLRPNGYFVYSAPPAYRKDKDYPLIWDKLVNLTTAMCWKLIAR 361 (617)
Q Consensus 303 ~h~~-~d~~~~L~el~RvLrPGG~Liis~p~~~~~~~~~~~~W~~le~La~~~gw~~v~~ 361 (617)
+... .....++.++.++| ||.+++..+ .....+.+.+.++..||++...
T Consensus 123 ~~~~~~~~~~~l~~~~~~l--~~~~~~~~~--------~~~~~~~~~~~l~~~g~~~~~~ 172 (207)
T 1wy7_A 123 GSQRKHADRPFLLKAFEIS--DVVYSIHLA--------KPEVRRFIEKFSWEHGFVVTHR 172 (207)
T ss_dssp SSSSTTTTHHHHHHHHHHC--SEEEEEEEC--------CHHHHHHHHHHHHHTTEEEEEE
T ss_pred ccccCCchHHHHHHHHHhc--CcEEEEEeC--------CcCCHHHHHHHHHHCCCeEEEE
Confidence 5543 23457899999999 665554321 1112445777888899876553
No 194
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=98.90 E-value=1.9e-09 Score=106.34 Aligned_cols=98 Identities=11% Similarity=0.157 Sum_probs=77.3
Q ss_pred CCCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHh----CC--CcEEEEecCCCC-CCC--CCCeeEEEe
Q 039518 228 GVFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALER----GI--GAMISALSTKQL-PYP--SSSFEMVHC 298 (617)
Q Consensus 228 ~g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~er----g~--~~~~~~~d~~~L-pf~--d~sFDlV~~ 298 (617)
++.+|||+|||+|.++..+++... ...++++|+++.+++.|+++ +. .+.+..+|+... +.. +++||+|++
T Consensus 54 ~~~~vLdiG~G~G~~~~~la~~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~~ 132 (233)
T 2gpy_A 54 APARILEIGTAIGYSAIRMAQALP-EATIVSIERDERRYEEAHKHVKALGLESRIELLFGDALQLGEKLELYPLFDVLFI 132 (233)
T ss_dssp CCSEEEEECCTTSHHHHHHHHHCT-TCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCGGGSHHHHTTSCCEEEEEE
T ss_pred CCCEEEEecCCCcHHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhcccCCCccEEEE
Confidence 345799999999999999988742 23788899999999999876 44 477777777553 432 578999997
Q ss_pred cccccccccchHHHHHHHHHhccCCeEEEEEe
Q 039518 299 SRCRVDWHANDGILLKEVDRVLRPNGYFVYSA 330 (617)
Q Consensus 299 s~~l~h~~~d~~~~L~el~RvLrPGG~Liis~ 330 (617)
.... .+...++.++.++|+|||.+++.+
T Consensus 133 ~~~~----~~~~~~l~~~~~~L~pgG~lv~~~ 160 (233)
T 2gpy_A 133 DAAK----GQYRRFFDMYSPMVRPGGLILSDN 160 (233)
T ss_dssp EGGG----SCHHHHHHHHGGGEEEEEEEEEET
T ss_pred CCCH----HHHHHHHHHHHHHcCCCeEEEEEc
Confidence 6432 367889999999999999999974
No 195
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=98.89 E-value=1.1e-08 Score=102.49 Aligned_cols=120 Identities=16% Similarity=0.074 Sum_probs=92.8
Q ss_pred CCCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHh----CC--CcEEEEecCCCCCCCCCCeeEEEeccc
Q 039518 228 GVFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALER----GI--GAMISALSTKQLPYPSSSFEMVHCSRC 301 (617)
Q Consensus 228 ~g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~er----g~--~~~~~~~d~~~Lpf~d~sFDlV~~s~~ 301 (617)
++.+|||||||+|.++..+++.+.. ..+.++|+++.+++.|+++ ++ .+.+..+|......+++.||+|+....
T Consensus 21 ~g~~VlDIGtGsG~l~i~la~~~~~-~~V~AvDi~~~al~~A~~N~~~~gl~~~I~~~~gD~l~~~~~~~~~D~IviaGm 99 (230)
T 3lec_A 21 KGARLLDVGSDHAYLPIFLLQMGYC-DFAIAGEVVNGPYQSALKNVSEHGLTSKIDVRLANGLSAFEEADNIDTITICGM 99 (230)
T ss_dssp TTEEEEEETCSTTHHHHHHHHTTCE-EEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGCCCEEEEEEE
T ss_pred CCCEEEEECCchHHHHHHHHHhCCC-CEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECchhhccccccccCEEEEeCC
Confidence 4567999999999999999998753 3788999999999999876 44 378888887665544457999885542
Q ss_pred ccccccchHHHHHHHHHhccCCeEEEEEeCCCCCCCCCChhhHHHHHHHHHHcCceEEEE
Q 039518 302 RVDWHANDGILLKEVDRVLRPNGYFVYSAPPAYRKDKDYPLIWDKLVNLTTAMCWKLIAR 361 (617)
Q Consensus 302 l~h~~~d~~~~L~el~RvLrPGG~Liis~p~~~~~~~~~~~~W~~le~La~~~gw~~v~~ 361 (617)
.- +-...+|.+..+.|+++|+|+++.. .. ...+.+.+.+.||.++..
T Consensus 100 Gg---~lI~~IL~~~~~~l~~~~~lIlqp~--------~~--~~~lr~~L~~~Gf~i~~E 146 (230)
T 3lec_A 100 GG---RLIADILNNDIDKLQHVKTLVLQPN--------NR--EDDLRKWLAANDFEIVAE 146 (230)
T ss_dssp CH---HHHHHHHHHTGGGGTTCCEEEEEES--------SC--HHHHHHHHHHTTEEEEEE
T ss_pred ch---HHHHHHHHHHHHHhCcCCEEEEECC--------CC--hHHHHHHHHHCCCEEEEE
Confidence 21 2356688899999999999999763 11 456888899999998874
No 196
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=98.89 E-value=4.1e-10 Score=115.74 Aligned_cols=96 Identities=16% Similarity=0.156 Sum_probs=69.2
Q ss_pred cCCCCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHhCC-------CcEEE--EecCCCCCCCCCCeeEE
Q 039518 226 SAGVFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALERGI-------GAMIS--ALSTKQLPYPSSSFEMV 296 (617)
Q Consensus 226 ~~~g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~erg~-------~~~~~--~~d~~~Lpf~d~sFDlV 296 (617)
+.++.+|||+|||+|.++..++++ . .+.++|+++ ++..++++.. ++.+. .+|+..+| +++||+|
T Consensus 80 ~~~g~~VLDlGcGtG~~s~~la~~-~---~V~gVD~s~-m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l~--~~~fD~V 152 (276)
T 2wa2_A 80 VELKGTVVDLGCGRGSWSYYAASQ-P---NVREVKAYT-LGTSGHEKPRLVETFGWNLITFKSKVDVTKME--PFQADTV 152 (276)
T ss_dssp CCCCEEEEEESCTTCHHHHHHHTS-T---TEEEEEEEC-CCCTTSCCCCCCCCTTGGGEEEECSCCGGGCC--CCCCSEE
T ss_pred CCCCCEEEEeccCCCHHHHHHHHc-C---CEEEEECch-hhhhhhhchhhhhhcCCCeEEEeccCcHhhCC--CCCcCEE
Confidence 356788999999999999999987 2 455667776 4333332221 56777 78888776 6789999
Q ss_pred Eecccccccccc----hH---HHHHHHHHhccCCe--EEEEEe
Q 039518 297 HCSRCRVDWHAN----DG---ILLKEVDRVLRPNG--YFVYSA 330 (617)
Q Consensus 297 ~~s~~l~h~~~d----~~---~~L~el~RvLrPGG--~Liis~ 330 (617)
+|..+ ++..+ .. .+|.++.++||||| .|++..
T Consensus 153 vsd~~--~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~~v~~~ 193 (276)
T 2wa2_A 153 LCDIG--ESNPTAAVEASRTLTVLNVISRWLEYNQGCGFCVKV 193 (276)
T ss_dssp EECCC--CCCSCHHHHHHHHHHHHHHHHHHHHHSTTCEEEEEE
T ss_pred EECCC--cCCCchhhhHHHHHHHHHHHHHHhccCCCcEEEEEe
Confidence 99754 22211 11 37899999999999 999865
No 197
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=98.88 E-value=2.4e-09 Score=104.50 Aligned_cols=100 Identities=10% Similarity=0.081 Sum_probs=75.7
Q ss_pred CCCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHh----CC--CcEEEEecCCCC-C-CC---CCCeeEE
Q 039518 228 GVFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALER----GI--GAMISALSTKQL-P-YP---SSSFEMV 296 (617)
Q Consensus 228 ~g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~er----g~--~~~~~~~d~~~L-p-f~---d~sFDlV 296 (617)
++.+|||||||+|.++..+++.......++++|+++.+++.|+++ +. .+.+..+|+... + ++ .++||+|
T Consensus 58 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~fD~v 137 (223)
T 3duw_A 58 GARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERANLNDRVEVRTGLALDSLQQIENEKYEPFDFI 137 (223)
T ss_dssp TCSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCCCCSEE
T ss_pred CCCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCcCEE
Confidence 345799999999999999998733223788899999999988865 44 377888776432 1 11 2679999
Q ss_pred EecccccccccchHHHHHHHHHhccCCeEEEEEeC
Q 039518 297 HCSRCRVDWHANDGILLKEVDRVLRPNGYFVYSAP 331 (617)
Q Consensus 297 ~~s~~l~h~~~d~~~~L~el~RvLrPGG~Liis~p 331 (617)
++... ......++.++.++|+|||++++...
T Consensus 138 ~~d~~----~~~~~~~l~~~~~~L~pgG~lv~~~~ 168 (223)
T 3duw_A 138 FIDAD----KQNNPAYFEWALKLSRPGTVIIGDNV 168 (223)
T ss_dssp EECSC----GGGHHHHHHHHHHTCCTTCEEEEESC
T ss_pred EEcCC----cHHHHHHHHHHHHhcCCCcEEEEeCC
Confidence 97642 23567899999999999999988754
No 198
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=98.88 E-value=7.7e-10 Score=124.39 Aligned_cols=98 Identities=15% Similarity=0.084 Sum_probs=80.4
Q ss_pred CCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHh----C-CCcEEEEecCCCC--CCCCCCeeEEEeccc
Q 039518 229 VFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALER----G-IGAMISALSTKQL--PYPSSSFEMVHCSRC 301 (617)
Q Consensus 229 g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~er----g-~~~~~~~~d~~~L--pf~d~sFDlV~~s~~ 301 (617)
+.+|||||||.|.++..|+++|. .|+++|.++.+++.|+.+ + .++.+.+++++++ ++.+++||+|+|..+
T Consensus 67 ~~~vLDvGCG~G~~~~~la~~ga---~V~giD~~~~~i~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~fD~v~~~e~ 143 (569)
T 4azs_A 67 PLNVLDLGCAQGFFSLSLASKGA---TIVGIDFQQENINVCRALAEENPDFAAEFRVGRIEEVIAALEEGEFDLAIGLSV 143 (569)
T ss_dssp CCEEEEETCTTSHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHHTSTTSEEEEEECCHHHHHHHCCTTSCSEEEEESC
T ss_pred CCeEEEECCCCcHHHHHHHhCCC---EEEEECCCHHHHHHHHHHHHhcCCCceEEEECCHHHHhhhccCCCccEEEECcc
Confidence 45799999999999999999987 678889999999988764 3 5788999998887 467889999999999
Q ss_pred ccccccchH--HHHHHHHHhccCCeEEEEEe
Q 039518 302 RVDWHANDG--ILLKEVDRVLRPNGYFVYSA 330 (617)
Q Consensus 302 l~h~~~d~~--~~L~el~RvLrPGG~Liis~ 330 (617)
++|.. ++. ..+..+.+.|+++|..++..
T Consensus 144 ~ehv~-~~~~~~~~~~~~~tl~~~~~~~~~~ 173 (569)
T 4azs_A 144 FHHIV-HLHGIDEVKRLLSRLADVTQAVILE 173 (569)
T ss_dssp HHHHH-HHHCHHHHHHHHHHHHHHSSEEEEE
T ss_pred hhcCC-CHHHHHHHHHHHHHhccccceeeEE
Confidence 99876 443 34566778888888766654
No 199
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=98.88 E-value=4.7e-09 Score=108.69 Aligned_cols=101 Identities=14% Similarity=0.108 Sum_probs=74.8
Q ss_pred CCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHhC----------CCcEEEEecCCCC-CCCCCCeeEEE
Q 039518 229 VFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALERG----------IGAMISALSTKQL-PYPSSSFEMVH 297 (617)
Q Consensus 229 g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~erg----------~~~~~~~~d~~~L-pf~d~sFDlV~ 297 (617)
+.+|||||||+|.++..+++... ...++++|+++.+++.|+++. .++.+..+|.... +..+++||+|+
T Consensus 84 ~~~VLdiG~G~G~~~~~l~~~~~-~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fDvIi 162 (294)
T 3adn_A 84 AKHVLIIGGGDGAMLREVTRHKN-VESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVII 162 (294)
T ss_dssp CCEEEEESCTTCHHHHHHHTCTT-CCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC---CCCCCEEEEE
T ss_pred CCEEEEEeCChhHHHHHHHhCCC-CCEEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHHHHHhhcCCCccEEE
Confidence 45799999999999999998732 237888999999999998752 2577888886543 44568899999
Q ss_pred ecccccccccc----hHHHHHHHHHhccCCeEEEEEeC
Q 039518 298 CSRCRVDWHAN----DGILLKEVDRVLRPNGYFVYSAP 331 (617)
Q Consensus 298 ~s~~l~h~~~d----~~~~L~el~RvLrPGG~Liis~p 331 (617)
+.. ..++... ...+++++.++|+|||.+++...
T Consensus 163 ~D~-~~p~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~~ 199 (294)
T 3adn_A 163 SDC-TDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQNG 199 (294)
T ss_dssp ECC-----------CCHHHHHHHHHTEEEEEEEEEEEE
T ss_pred ECC-CCccCcchhccHHHHHHHHHHhcCCCCEEEEecC
Confidence 853 2232211 16799999999999999999753
No 200
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=98.87 E-value=4.4e-09 Score=116.07 Aligned_cols=99 Identities=15% Similarity=0.161 Sum_probs=78.0
Q ss_pred CCCCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHh----CC--CcEEEEecCCCCCCCCCCeeEEEecc
Q 039518 227 AGVFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALER----GI--GAMISALSTKQLPYPSSSFEMVHCSR 300 (617)
Q Consensus 227 ~~g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~er----g~--~~~~~~~d~~~Lpf~d~sFDlV~~s~ 300 (617)
.++.+|||||||+|.++..+++.+. ..++++|+++ +++.|+++ ++ ++.+..+|+.+++++ ++||+|+|+.
T Consensus 157 ~~~~~VLDiGcGtG~la~~la~~~~--~~V~gvD~s~-~l~~A~~~~~~~gl~~~v~~~~~d~~~~~~~-~~fD~Ivs~~ 232 (480)
T 3b3j_A 157 FKDKIVLDVGCGSGILSFFAAQAGA--RKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVEEVSLP-EQVDIIISEP 232 (480)
T ss_dssp TTTCEEEEESCSTTHHHHHHHHTTC--SEEEEEECHH-HHHHHHHHHHHTTCTTTEEEEESCTTTCCCS-SCEEEEECCC
T ss_pred cCCCEEEEecCcccHHHHHHHHcCC--CEEEEEEcHH-HHHHHHHHHHHcCCCCcEEEEECchhhCccC-CCeEEEEEeC
Confidence 3566899999999999999988753 2678889998 87777664 43 478889998887765 5799999976
Q ss_pred cccccc-cchHHHHHHHHHhccCCeEEEEE
Q 039518 301 CRVDWH-ANDGILLKEVDRVLRPNGYFVYS 329 (617)
Q Consensus 301 ~l~h~~-~d~~~~L~el~RvLrPGG~Liis 329 (617)
...++. ++....+.++.++|+|||++++.
T Consensus 233 ~~~~~~~e~~~~~l~~~~~~LkpgG~li~~ 262 (480)
T 3b3j_A 233 MGYMLFNERMLESYLHAKKYLKPSGNMFPT 262 (480)
T ss_dssp CHHHHTCHHHHHHHHHGGGGEEEEEEEESC
T ss_pred chHhcCcHHHHHHHHHHHHhcCCCCEEEEE
Confidence 555554 34456788999999999999864
No 201
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=98.87 E-value=5.6e-10 Score=114.02 Aligned_cols=97 Identities=14% Similarity=0.119 Sum_probs=68.3
Q ss_pred cCCCCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHhC-------CCcEEE--EecCCCCCCCCCCeeEE
Q 039518 226 SAGVFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALERG-------IGAMIS--ALSTKQLPYPSSSFEMV 296 (617)
Q Consensus 226 ~~~g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~erg-------~~~~~~--~~d~~~Lpf~d~sFDlV 296 (617)
+.++.+|||+|||+|.++..++++ . .|.++|+++ ++..++++. .++.+. .+|+..++ +++||+|
T Consensus 72 ~~~g~~VLDlGcGtG~~s~~la~~-~---~V~gvD~s~-m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l~--~~~fD~V 144 (265)
T 2oxt_A 72 VELTGRVVDLGCGRGGWSYYAASR-P---HVMDVRAYT-LGVGGHEVPRITESYGWNIVKFKSRVDIHTLP--VERTDVI 144 (265)
T ss_dssp CCCCEEEEEESCTTSHHHHHHHTS-T---TEEEEEEEC-CCCSSCCCCCCCCBTTGGGEEEECSCCTTTSC--CCCCSEE
T ss_pred CCCCCEEEEeCcCCCHHHHHHHHc-C---cEEEEECch-hhhhhhhhhhhhhccCCCeEEEecccCHhHCC--CCCCcEE
Confidence 356778999999999999999987 2 455667666 322222221 146777 77888776 6789999
Q ss_pred Eecccccccc---cchH---HHHHHHHHhccCCe--EEEEEe
Q 039518 297 HCSRCRVDWH---ANDG---ILLKEVDRVLRPNG--YFVYSA 330 (617)
Q Consensus 297 ~~s~~l~h~~---~d~~---~~L~el~RvLrPGG--~Liis~ 330 (617)
+|..+ .+.. .+.. .+|.++.++||||| .|++..
T Consensus 145 ~sd~~-~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~fv~kv 185 (265)
T 2oxt_A 145 MCDVG-ESSPKWSVESERTIKILELLEKWKVKNPSADFVVKV 185 (265)
T ss_dssp EECCC-CCCSCHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEE
T ss_pred EEeCc-ccCCccchhHHHHHHHHHHHHHHhccCCCeEEEEEe
Confidence 99754 2211 1111 37899999999999 999966
No 202
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=98.86 E-value=1.4e-08 Score=102.53 Aligned_cols=120 Identities=10% Similarity=0.045 Sum_probs=91.9
Q ss_pred CCCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHh----CC--CcEEEEecCCCCCCCCCCeeEEEeccc
Q 039518 228 GVFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALER----GI--GAMISALSTKQLPYPSSSFEMVHCSRC 301 (617)
Q Consensus 228 ~g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~er----g~--~~~~~~~d~~~Lpf~d~sFDlV~~s~~ 301 (617)
++.+|||||||+|.++..|++.+.. ..+.++|+++.+++.|+++ ++ .+.+..+|......++.+||+|+....
T Consensus 21 ~g~~VlDIGtGsG~l~i~la~~~~~-~~V~avDi~~~al~~A~~N~~~~gl~~~I~v~~gD~l~~~~~~~~~D~Iviagm 99 (244)
T 3gnl_A 21 KNERIADIGSDHAYLPCFAVKNQTA-SFAIAGEVVDGPFQSAQKQVRSSGLTEQIDVRKGNGLAVIEKKDAIDTIVIAGM 99 (244)
T ss_dssp SSEEEEEETCSTTHHHHHHHHTTSE-EEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGCCCEEEEEEE
T ss_pred CCCEEEEECCccHHHHHHHHHhCCC-CEEEEEECCHHHHHHHHHHHHHcCCCceEEEEecchhhccCccccccEEEEeCC
Confidence 4567999999999999999998653 3788999999999999876 54 367888886555444446999986542
Q ss_pred ccccccchHHHHHHHHHhccCCeEEEEEeCCCCCCCCCChhhHHHHHHHHHHcCceEEEE
Q 039518 302 RVDWHANDGILLKEVDRVLRPNGYFVYSAPPAYRKDKDYPLIWDKLVNLTTAMCWKLIAR 361 (617)
Q Consensus 302 l~h~~~d~~~~L~el~RvLrPGG~Liis~p~~~~~~~~~~~~W~~le~La~~~gw~~v~~ 361 (617)
.- +-...+|.+..+.|+++|+|+++.. .. ...+.+.+.+.||.++..
T Consensus 100 Gg---~lI~~IL~~~~~~L~~~~~lIlq~~--------~~--~~~lr~~L~~~Gf~i~~E 146 (244)
T 3gnl_A 100 GG---TLIRTILEEGAAKLAGVTKLILQPN--------IA--AWQLREWSEQNNWLITSE 146 (244)
T ss_dssp CH---HHHHHHHHHTGGGGTTCCEEEEEES--------SC--HHHHHHHHHHHTEEEEEE
T ss_pred ch---HHHHHHHHHHHHHhCCCCEEEEEcC--------CC--hHHHHHHHHHCCCEEEEE
Confidence 21 2345688999999999999999762 11 456888899999998763
No 203
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=98.86 E-value=5.3e-09 Score=110.30 Aligned_cols=102 Identities=13% Similarity=0.055 Sum_probs=77.6
Q ss_pred CCCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHhC---------CCcEEEEecCCCC--CCCCCCeeEE
Q 039518 228 GVFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALERG---------IGAMISALSTKQL--PYPSSSFEMV 296 (617)
Q Consensus 228 ~g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~erg---------~~~~~~~~d~~~L--pf~d~sFDlV 296 (617)
.+.+|||||||+|.++..|++... ...++++|+++.+++.|+++. .++.+..+|+... .+++++||+|
T Consensus 120 ~~~~VLdIG~G~G~~a~~la~~~~-~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~D~~~~l~~~~~~~fDlI 198 (334)
T 1xj5_A 120 NPKKVLVIGGGDGGVLREVARHAS-IEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFLKNAAEGSYDAV 198 (334)
T ss_dssp CCCEEEEETCSSSHHHHHHTTCTT-CCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHHHHHTSCTTCEEEE
T ss_pred CCCEEEEECCCccHHHHHHHHcCC-CCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEECCHHHHHHhccCCCccEE
Confidence 456899999999999999998732 237888999999999998763 3577888886543 2346789999
Q ss_pred Eecccccccc--cc--hHHHHHHHHHhccCCeEEEEEeC
Q 039518 297 HCSRCRVDWH--AN--DGILLKEVDRVLRPNGYFVYSAP 331 (617)
Q Consensus 297 ~~s~~l~h~~--~d--~~~~L~el~RvLrPGG~Liis~p 331 (617)
++.. ..++. .+ ...+++++.++|+|||.+++...
T Consensus 199 i~d~-~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~ 236 (334)
T 1xj5_A 199 IVDS-SDPIGPAKELFEKPFFQSVARALRPGGVVCTQAE 236 (334)
T ss_dssp EECC-CCTTSGGGGGGSHHHHHHHHHHEEEEEEEEEECC
T ss_pred EECC-CCccCcchhhhHHHHHHHHHHhcCCCcEEEEecC
Confidence 9853 22222 11 36899999999999999999743
No 204
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=98.85 E-value=6.9e-10 Score=119.36 Aligned_cols=96 Identities=14% Similarity=0.069 Sum_probs=75.0
Q ss_pred CCeEEEECCC------CcHHHHHhccC-CCcEEEeeecCCcHHHHHHHHHhCCCcEEEEecCCCCCCC------CCCeeE
Q 039518 229 VFQVLDVGCG------VASFSAFLLPL-DIQTMSFAPKDGHENQIQFALERGIGAMISALSTKQLPYP------SSSFEM 295 (617)
Q Consensus 229 g~rVLDIGCG------tG~~a~~La~~-gv~~v~v~~iDis~~~lq~A~erg~~~~~~~~d~~~Lpf~------d~sFDl 295 (617)
+.+||||||| +|..+..++++ ... ..|+++|+++.+. ....++.+.++|+.++|+. +++||+
T Consensus 217 ~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~-a~V~GVDiSp~m~----~~~~rI~fv~GDa~dlpf~~~l~~~d~sFDl 291 (419)
T 3sso_A 217 QVRVLEIGVGGYKHPEWGGGSLRMWKSFFPR-GQIYGLDIMDKSH----VDELRIRTIQGDQNDAEFLDRIARRYGPFDI 291 (419)
T ss_dssp CCEEEEECCSCTTCSSCCCHHHHHHHHHCTT-CEEEEEESSCCGG----GCBTTEEEEECCTTCHHHHHHHHHHHCCEEE
T ss_pred CCEEEEEecCCCcCCCCCHHHHHHHHHhCCC-CEEEEEECCHHHh----hcCCCcEEEEecccccchhhhhhcccCCccE
Confidence 4579999999 66666666654 222 3788889998873 2345689999999998887 789999
Q ss_pred EEecccccccccchHHHHHHHHHhccCCeEEEEEeC
Q 039518 296 VHCSRCRVDWHANDGILLKEVDRVLRPNGYFVYSAP 331 (617)
Q Consensus 296 V~~s~~l~h~~~d~~~~L~el~RvLrPGG~Liis~p 331 (617)
|+|.. .++ ..+...+|+++.|+|||||++++.+.
T Consensus 292 Visdg-sH~-~~d~~~aL~el~rvLKPGGvlVi~Dl 325 (419)
T 3sso_A 292 VIDDG-SHI-NAHVRTSFAALFPHVRPGGLYVIEDM 325 (419)
T ss_dssp EEECS-CCC-HHHHHHHHHHHGGGEEEEEEEEEECG
T ss_pred EEECC-ccc-chhHHHHHHHHHHhcCCCeEEEEEec
Confidence 99864 444 45788999999999999999999864
No 205
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=98.83 E-value=3e-09 Score=116.85 Aligned_cols=129 Identities=18% Similarity=0.176 Sum_probs=89.9
Q ss_pred CCCCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHh----CCCcEEEEecCCCCC-CCCCCeeEEEe---
Q 039518 227 AGVFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALER----GIGAMISALSTKQLP-YPSSSFEMVHC--- 298 (617)
Q Consensus 227 ~~g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~er----g~~~~~~~~d~~~Lp-f~d~sFDlV~~--- 298 (617)
.++.+|||+|||+|..+..|+++......+.++|+++.+++.++++ |+.+.+..+|+..++ +.+++||+|++
T Consensus 100 ~~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~G~~v~~~~~Da~~l~~~~~~~FD~Il~D~P 179 (464)
T 3m6w_A 100 KPGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERWGAPLAVTQAPPRALAEAFGTYFHRVLLDAP 179 (464)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHCCCCEEECSCHHHHHHHHCSCEEEEEEECC
T ss_pred CCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCeEEEEECCHHHhhhhccccCCEEEECCC
Confidence 4677899999999999999987632222678889999999988775 666777777776665 34678999995
Q ss_pred -ccc-cc--------cccc--------chHHHHHHHHHhccCCeEEEEEeCCCCCCCCCChhhHHHHHHHHHHc-CceEE
Q 039518 299 -SRC-RV--------DWHA--------NDGILLKEVDRVLRPNGYFVYSAPPAYRKDKDYPLIWDKLVNLTTAM-CWKLI 359 (617)
Q Consensus 299 -s~~-l~--------h~~~--------d~~~~L~el~RvLrPGG~Liis~p~~~~~~~~~~~~W~~le~La~~~-gw~~v 359 (617)
+.. .+ .+.. ....+|.++.++|||||.|++++-..... ++ -+.+..++++. +|+++
T Consensus 180 cSg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvysTCs~~~e--En---e~vv~~~l~~~~~~~l~ 254 (464)
T 3m6w_A 180 CSGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLGPGGVLVYSTCTFAPE--EN---EGVVAHFLKAHPEFRLE 254 (464)
T ss_dssp CCCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCCCGG--GT---HHHHHHHHHHCTTEEEE
T ss_pred cCCccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeccCchh--cC---HHHHHHHHHHCCCcEEE
Confidence 210 11 1110 01568999999999999999988644322 22 23366777766 57665
Q ss_pred E
Q 039518 360 A 360 (617)
Q Consensus 360 ~ 360 (617)
.
T Consensus 255 ~ 255 (464)
T 3m6w_A 255 D 255 (464)
T ss_dssp C
T ss_pred e
Confidence 4
No 206
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=98.83 E-value=1.1e-08 Score=109.63 Aligned_cols=97 Identities=15% Similarity=0.167 Sum_probs=70.7
Q ss_pred CCCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHH----HhCC--CcEEEEecCCCCCCCCCCeeEEEecc-
Q 039518 228 GVFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFAL----ERGI--GAMISALSTKQLPYPSSSFEMVHCSR- 300 (617)
Q Consensus 228 ~g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~----erg~--~~~~~~~d~~~Lpf~d~sFDlV~~s~- 300 (617)
++++|||||||+|.++..+++.|.. .|.++|.++ +++.|+ .++. .+.+..++++++.++ +.||+|+|-.
T Consensus 83 ~~k~VLDvG~GtGiLs~~Aa~aGA~--~V~ave~s~-~~~~a~~~~~~n~~~~~i~~i~~~~~~~~lp-e~~DvivsE~~ 158 (376)
T 4hc4_A 83 RGKTVLDVGAGTGILSIFCAQAGAR--RVYAVEASA-IWQQAREVVRFNGLEDRVHVLPGPVETVELP-EQVDAIVSEWM 158 (376)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTCS--EEEEEECST-THHHHHHHHHHTTCTTTEEEEESCTTTCCCS-SCEEEEECCCC
T ss_pred CCCEEEEeCCCccHHHHHHHHhCCC--EEEEEeChH-HHHHHHHHHHHcCCCceEEEEeeeeeeecCC-ccccEEEeecc
Confidence 3456999999999999988888764 455666664 445454 3454 378888899888876 5799999732
Q ss_pred --cccccccchHHHHHHHHHhccCCeEEEEE
Q 039518 301 --CRVDWHANDGILLKEVDRVLRPNGYFVYS 329 (617)
Q Consensus 301 --~l~h~~~d~~~~L~el~RvLrPGG~Liis 329 (617)
++++ ......++....|+|+|||.++-.
T Consensus 159 ~~~l~~-e~~l~~~l~a~~r~Lkp~G~~iP~ 188 (376)
T 4hc4_A 159 GYGLLH-ESMLSSVLHARTKWLKEGGLLLPA 188 (376)
T ss_dssp BTTBTT-TCSHHHHHHHHHHHEEEEEEEESC
T ss_pred cccccc-cchhhhHHHHHHhhCCCCceECCc
Confidence 2222 234678889999999999998753
No 207
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=98.82 E-value=4.2e-08 Score=100.92 Aligned_cols=135 Identities=7% Similarity=0.048 Sum_probs=93.9
Q ss_pred CCCCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHh----CCC--cEEEEecCCCCCCCCCCeeEEEecc
Q 039518 227 AGVFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALER----GIG--AMISALSTKQLPYPSSSFEMVHCSR 300 (617)
Q Consensus 227 ~~g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~er----g~~--~~~~~~d~~~Lpf~d~sFDlV~~s~ 300 (617)
.+|.+|||+|||+|.++..++.++.. .+.++|+++.+++.++++ ++. +.+..+|+..++ ..+.||.|+++.
T Consensus 124 ~~g~~VlD~~aG~G~~~i~~a~~g~~--~V~avD~np~a~~~~~~N~~~N~v~~~v~~~~~D~~~~~-~~~~~D~Vi~~~ 200 (278)
T 3k6r_A 124 KPDELVVDMFAGIGHLSLPIAVYGKA--KVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFP-GENIADRILMGY 200 (278)
T ss_dssp CTTCEEEETTCTTTTTTHHHHHHTCC--EEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCC-CCSCEEEEEECC
T ss_pred CCCCEEEEecCcCcHHHHHHHHhcCC--eEEEEECCHHHHHHHHHHHHHcCCCCcEEEEeCcHHHhc-cccCCCEEEECC
Confidence 35667999999999999999987643 577889999999988775 443 667778887765 357899998653
Q ss_pred cccccccchHHHHHHHHHhccCCeEEEEEeCCCCCCCCCChhhHHHHHHHHHHcCceEEEEeeeeEEEeec
Q 039518 301 CRVDWHANDGILLKEVDRVLRPNGYFVYSAPPAYRKDKDYPLIWDKLVNLTTAMCWKLIARKIQTAIWIKE 371 (617)
Q Consensus 301 ~l~h~~~d~~~~L~el~RvLrPGG~Liis~p~~~~~~~~~~~~W~~le~La~~~gw~~v~~~~~~~IwqKp 371 (617)
+.....+|..+.++|+|||.+.+........... ...+.++++++..|++........+-+-.|
T Consensus 201 -----p~~~~~~l~~a~~~lk~gG~ih~~~~~~e~~~~~--~~~e~i~~~~~~~g~~v~~~~~~~Vk~yaP 264 (278)
T 3k6r_A 201 -----VVRTHEFIPKALSIAKDGAIIHYHNTVPEKLMPR--EPFETFKRITKEYGYDVEKLNELKIKRYAP 264 (278)
T ss_dssp -----CSSGGGGHHHHHHHEEEEEEEEEEEEEEGGGTTT--TTHHHHHHHHHHTTCEEEEEEEEEEEEETT
T ss_pred -----CCcHHHHHHHHHHHcCCCCEEEEEeeecccccch--hHHHHHHHHHHHcCCcEEEEEEEEEEeECc
Confidence 2234567888999999999987643211111111 225668888999999875544333333333
No 208
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=98.82 E-value=1.8e-09 Score=102.82 Aligned_cols=99 Identities=15% Similarity=0.083 Sum_probs=69.1
Q ss_pred CCCCeEEEECCCCcHHHHHhccCCCcE--------EEeeecCCcHHHHHHHHHhCCCcEEE-EecCCCCC--------CC
Q 039518 227 AGVFQVLDVGCGVASFSAFLLPLDIQT--------MSFAPKDGHENQIQFALERGIGAMIS-ALSTKQLP--------YP 289 (617)
Q Consensus 227 ~~g~rVLDIGCGtG~~a~~La~~gv~~--------v~v~~iDis~~~lq~A~erg~~~~~~-~~d~~~Lp--------f~ 289 (617)
.++.+|||+|||+|.++..|+++.... ..+.++|+++.+ ....+.+. .+|+...+ ++
T Consensus 21 ~~~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~------~~~~~~~~~~~d~~~~~~~~~~~~~~~ 94 (196)
T 2nyu_A 21 RPGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIF------PLEGATFLCPADVTDPRTSQRILEVLP 94 (196)
T ss_dssp CTTCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCC------CCTTCEEECSCCTTSHHHHHHHHHHSG
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhcc------cCCCCeEEEeccCCCHHHHHHHHHhcC
Confidence 457789999999999999998873210 267788988732 11235666 66665432 34
Q ss_pred CCCeeEEEeccccc---ccccch-------HHHHHHHHHhccCCeEEEEEeC
Q 039518 290 SSSFEMVHCSRCRV---DWHAND-------GILLKEVDRVLRPNGYFVYSAP 331 (617)
Q Consensus 290 d~sFDlV~~s~~l~---h~~~d~-------~~~L~el~RvLrPGG~Liis~p 331 (617)
+++||+|+|..+.+ ++..+. ..++.++.++|||||.+++...
T Consensus 95 ~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~ 146 (196)
T 2nyu_A 95 GRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKTW 146 (196)
T ss_dssp GGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred CCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEec
Confidence 56899999864322 222223 4789999999999999999864
No 209
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=98.81 E-value=3e-08 Score=99.05 Aligned_cols=119 Identities=14% Similarity=0.051 Sum_probs=90.2
Q ss_pred CCCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHh----CC--CcEEEEecC-CCCCCCCCCeeEEEecc
Q 039518 228 GVFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALER----GI--GAMISALST-KQLPYPSSSFEMVHCSR 300 (617)
Q Consensus 228 ~g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~er----g~--~~~~~~~d~-~~Lpf~d~sFDlV~~s~ 300 (617)
++.+|||||||+|.++..++..+.. ..+.++|+++.+++.|+++ ++ .+.+..+|. +.++. ...||+|+.+.
T Consensus 15 ~g~~VlDIGtGsG~l~i~la~~~~~-~~V~avDi~~~al~~A~~N~~~~gl~~~i~~~~~d~l~~l~~-~~~~D~IviaG 92 (225)
T 3kr9_A 15 QGAILLDVGSDHAYLPIELVERGQI-KSAIAGEVVEGPYQSAVKNVEAHGLKEKIQVRLANGLAAFEE-TDQVSVITIAG 92 (225)
T ss_dssp TTEEEEEETCSTTHHHHHHHHTTSE-EEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCG-GGCCCEEEEEE
T ss_pred CCCEEEEeCCCcHHHHHHHHHhCCC-CEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECchhhhccc-CcCCCEEEEcC
Confidence 4567999999999999999998753 3788999999999999875 54 367777776 44442 22699998654
Q ss_pred cccccccchHHHHHHHHHhccCCeEEEEEeCCCCCCCCCChhhHHHHHHHHHHcCceEEEE
Q 039518 301 CRVDWHANDGILLKEVDRVLRPNGYFVYSAPPAYRKDKDYPLIWDKLVNLTTAMCWKLIAR 361 (617)
Q Consensus 301 ~l~h~~~d~~~~L~el~RvLrPGG~Liis~p~~~~~~~~~~~~W~~le~La~~~gw~~v~~ 361 (617)
..- .-...+|.+..+.|+|+|+|+++.. .. ...+.+.+.+.||.++..
T Consensus 93 ~Gg---~~i~~Il~~~~~~L~~~~~lVlq~~--------~~--~~~vr~~L~~~Gf~i~~e 140 (225)
T 3kr9_A 93 MGG---RLIARILEEGLGKLANVERLILQPN--------NR--EDDLRIWLQDHGFQIVAE 140 (225)
T ss_dssp ECH---HHHHHHHHHTGGGCTTCCEEEEEES--------SC--HHHHHHHHHHTTEEEEEE
T ss_pred CCh---HHHHHHHHHHHHHhCCCCEEEEECC--------CC--HHHHHHHHHHCCCEEEEE
Confidence 211 1246789999999999999999653 11 456888899999998874
No 210
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=98.80 E-value=5.6e-09 Score=103.55 Aligned_cols=99 Identities=15% Similarity=0.154 Sum_probs=75.3
Q ss_pred CCCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHh----CCC--cEEEEecCCC-CC-------------
Q 039518 228 GVFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALER----GIG--AMISALSTKQ-LP------------- 287 (617)
Q Consensus 228 ~g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~er----g~~--~~~~~~d~~~-Lp------------- 287 (617)
++.+|||||||+|.++..+++.......++++|+++.+++.|+++ +.. +.+..+|... ++
T Consensus 60 ~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~~~~~~~~~~ 139 (239)
T 2hnk_A 60 GAKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGLENKIFLKLGSALETLQVLIDSKSAPSWAS 139 (239)
T ss_dssp TCSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHCSSCCGGGT
T ss_pred CcCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHHHHHHHhhcccccccc
Confidence 345799999999999999988632223778889999999998876 442 6777776533 12
Q ss_pred -CCC--CCeeEEEecccccccccchHHHHHHHHHhccCCeEEEEEe
Q 039518 288 -YPS--SSFEMVHCSRCRVDWHANDGILLKEVDRVLRPNGYFVYSA 330 (617)
Q Consensus 288 -f~d--~sFDlV~~s~~l~h~~~d~~~~L~el~RvLrPGG~Liis~ 330 (617)
|++ ++||+|++... ..+...++.++.++|+|||.+++..
T Consensus 140 ~f~~~~~~fD~I~~~~~----~~~~~~~l~~~~~~L~pgG~lv~~~ 181 (239)
T 2hnk_A 140 DFAFGPSSIDLFFLDAD----KENYPNYYPLILKLLKPGGLLIADN 181 (239)
T ss_dssp TTCCSTTCEEEEEECSC----GGGHHHHHHHHHHHEEEEEEEEEEC
T ss_pred cccCCCCCcCEEEEeCC----HHHHHHHHHHHHHHcCCCeEEEEEc
Confidence 333 78999997642 2356689999999999999999975
No 211
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=98.80 E-value=9.3e-09 Score=111.59 Aligned_cols=127 Identities=12% Similarity=0.138 Sum_probs=89.8
Q ss_pred CCCCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHh----CCCcEEEEecCCCCC--CCCCCeeEEEec-
Q 039518 227 AGVFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALER----GIGAMISALSTKQLP--YPSSSFEMVHCS- 299 (617)
Q Consensus 227 ~~g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~er----g~~~~~~~~d~~~Lp--f~d~sFDlV~~s- 299 (617)
.++.+|||+|||+|..+..+++.... ..++++|+++.+++.++++ +.++.+..+|...++ +++++||+|++.
T Consensus 245 ~~g~~VLDlgaG~G~~t~~la~~~~~-~~v~a~D~~~~~l~~~~~~~~~~g~~~~~~~~D~~~~~~~~~~~~fD~Vl~D~ 323 (429)
T 1sqg_A 245 QNGEHILDLCAAPGGKTTHILEVAPE-AQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRYPSQWCGEQQFDRILLDA 323 (429)
T ss_dssp CTTCEEEEESCTTCHHHHHHHHHCTT-CEEEEEESSTTTHHHHHHHHHHTTCCCEEEECCTTCTHHHHTTCCEEEEEEEC
T ss_pred CCcCeEEEECCCchHHHHHHHHHcCC-CEEEEECCCHHHHHHHHHHHHHcCCCeEEEeCchhhchhhcccCCCCEEEEeC
Confidence 46678999999999999999987543 3788889999988888765 667888888887776 566789999952
Q ss_pred ---c-cccccccch----------------HHHHHHHHHhccCCeEEEEEeCCCCCCCCCChhhHHHHHHHHHHc-CceE
Q 039518 300 ---R-CRVDWHAND----------------GILLKEVDRVLRPNGYFVYSAPPAYRKDKDYPLIWDKLVNLTTAM-CWKL 358 (617)
Q Consensus 300 ---~-~l~h~~~d~----------------~~~L~el~RvLrPGG~Liis~p~~~~~~~~~~~~W~~le~La~~~-gw~~ 358 (617)
. ..++-.++. ..+|.++.++|||||++++++...... +. -..+..++++. +|+.
T Consensus 324 Pcsg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~LkpGG~lvystcs~~~~--en---e~~v~~~l~~~~~~~~ 398 (429)
T 1sqg_A 324 PCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPE--EN---SLQIKAFLQRTADAEL 398 (429)
T ss_dssp CCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEEESCCCGG--GT---HHHHHHHHHHCTTCEE
T ss_pred CCCcccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCChh--hH---HHHHHHHHHhCCCCEE
Confidence 1 111111111 468999999999999999988543322 11 23355555554 5665
Q ss_pred E
Q 039518 359 I 359 (617)
Q Consensus 359 v 359 (617)
+
T Consensus 399 ~ 399 (429)
T 1sqg_A 399 C 399 (429)
T ss_dssp C
T ss_pred e
Confidence 4
No 212
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=98.80 E-value=6.7e-09 Score=111.33 Aligned_cols=126 Identities=11% Similarity=0.058 Sum_probs=88.9
Q ss_pred CCCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHh----CC---CcEEEEecCCC-CCC---CCCCeeEE
Q 039518 228 GVFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALER----GI---GAMISALSTKQ-LPY---PSSSFEMV 296 (617)
Q Consensus 228 ~g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~er----g~---~~~~~~~d~~~-Lpf---~d~sFDlV 296 (617)
++.+|||+|||+|.++..+++.+.. .++++|+++.+++.|+++ ++ ++.+..+|+.+ ++. ..++||+|
T Consensus 212 ~~~~VLDl~cGtG~~sl~la~~ga~--~V~~vD~s~~al~~A~~N~~~n~~~~~~v~~~~~D~~~~l~~~~~~~~~fD~I 289 (385)
T 2b78_A 212 AGKTVLNLFSYTAAFSVAAAMGGAM--ATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVFDYFKYARRHHLTYDII 289 (385)
T ss_dssp BTCEEEEETCTTTHHHHHHHHTTBS--EEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHHHHHHHHHHTTCCEEEE
T ss_pred CCCeEEEEeeccCHHHHHHHHCCCC--EEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHHhCCCccEE
Confidence 4567999999999999999987643 678889999999988875 44 57788888654 221 24589999
Q ss_pred Eeccccc--------ccccchHHHHHHHHHhccCCeEEEEEeCCCCCCCCCChhhHHHHHHHHHHcCceE
Q 039518 297 HCSRCRV--------DWHANDGILLKEVDRVLRPNGYFVYSAPPAYRKDKDYPLIWDKLVNLTTAMCWKL 358 (617)
Q Consensus 297 ~~s~~l~--------h~~~d~~~~L~el~RvLrPGG~Liis~p~~~~~~~~~~~~W~~le~La~~~gw~~ 358 (617)
++.-... ....+...++.++.++|+|||.++++..+... .....++.+...+...|.+.
T Consensus 290 i~DPP~~~~~~~~~~~~~~~~~~ll~~~~~~L~pgG~l~~~~~~~~~---~~~~~~~~i~~~~~~~g~~~ 356 (385)
T 2b78_A 290 IIDPPSFARNKKEVFSVSKDYHKLIRQGLEILSENGLIIASTNAANM---TVSQFKKQIEKGFGKQKHTY 356 (385)
T ss_dssp EECCCCC-----CCCCHHHHHHHHHHHHHHTEEEEEEEEEEECCTTS---CHHHHHHHHHHHHTTCCCEE
T ss_pred EECCCCCCCChhhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCcC---CHHHHHHHHHHHHHHcCCcE
Confidence 9853221 11123455788889999999999998854332 11223444666777777773
No 213
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=98.80 E-value=5.4e-09 Score=103.68 Aligned_cols=99 Identities=16% Similarity=0.081 Sum_probs=75.5
Q ss_pred CCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHh----CC--CcEEEEecCC----CCCCCC--CCeeEE
Q 039518 229 VFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALER----GI--GAMISALSTK----QLPYPS--SSFEMV 296 (617)
Q Consensus 229 g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~er----g~--~~~~~~~d~~----~Lpf~d--~sFDlV 296 (617)
+.+|||||||+|..+..+++.......++++|+++.+++.|+++ +. .+.+..+++. .++..+ ++||+|
T Consensus 73 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~l~~l~~~~~~~~fD~V 152 (232)
T 3cbg_A 73 AKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGVAEKISLRLGPALATLEQLTQGKPLPEFDLI 152 (232)
T ss_dssp CCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHTSSSCCCEEEE
T ss_pred CCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCCcCEE
Confidence 34699999999999999988632223678889999999998875 44 3677777743 233333 789999
Q ss_pred EecccccccccchHHHHHHHHHhccCCeEEEEEeC
Q 039518 297 HCSRCRVDWHANDGILLKEVDRVLRPNGYFVYSAP 331 (617)
Q Consensus 297 ~~s~~l~h~~~d~~~~L~el~RvLrPGG~Liis~p 331 (617)
++... ..+...++.++.++|+|||++++...
T Consensus 153 ~~d~~----~~~~~~~l~~~~~~LkpgG~lv~~~~ 183 (232)
T 3cbg_A 153 FIDAD----KRNYPRYYEIGLNLLRRGGLMVIDNV 183 (232)
T ss_dssp EECSC----GGGHHHHHHHHHHTEEEEEEEEEECT
T ss_pred EECCC----HHHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 97632 34667899999999999999999754
No 214
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=98.80 E-value=8e-09 Score=105.71 Aligned_cols=102 Identities=12% Similarity=0.077 Sum_probs=77.4
Q ss_pred CCCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHhC---------CCcEEEEecCCC-CCCCCCCeeEEE
Q 039518 228 GVFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALERG---------IGAMISALSTKQ-LPYPSSSFEMVH 297 (617)
Q Consensus 228 ~g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~erg---------~~~~~~~~d~~~-Lpf~d~sFDlV~ 297 (617)
.+.+|||||||+|.++..+++... ...++.+|+++.+++.|+++. .++.+..+|+.. ++..+++||+|+
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~~~~~-~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~fD~Ii 153 (275)
T 1iy9_A 75 NPEHVLVVGGGDGGVIREILKHPS-VKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIAKSENQYDVIM 153 (275)
T ss_dssp SCCEEEEESCTTCHHHHHHTTCTT-CSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHHTCCSCEEEEE
T ss_pred CCCEEEEECCchHHHHHHHHhCCC-CceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCeeEEE
Confidence 346799999999999999998721 237888999999999998753 247788888644 343467899999
Q ss_pred ecccccccccc----hHHHHHHHHHhccCCeEEEEEeC
Q 039518 298 CSRCRVDWHAN----DGILLKEVDRVLRPNGYFVYSAP 331 (617)
Q Consensus 298 ~s~~l~h~~~d----~~~~L~el~RvLrPGG~Liis~p 331 (617)
+.. ..++... ...+++++.++|+|||.+++...
T Consensus 154 ~d~-~~~~~~~~~l~~~~~~~~~~~~L~pgG~lv~~~~ 190 (275)
T 1iy9_A 154 VDS-TEPVGPAVNLFTKGFYAGIAKALKEDGIFVAQTD 190 (275)
T ss_dssp ESC-SSCCSCCCCCSTTHHHHHHHHHEEEEEEEEEECC
T ss_pred ECC-CCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcC
Confidence 853 3332211 26799999999999999999753
No 215
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=98.79 E-value=2.1e-08 Score=107.92 Aligned_cols=125 Identities=14% Similarity=0.010 Sum_probs=85.9
Q ss_pred CCCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHh----CCCcEEEEecCCCC-CCCCCCeeEEEecccc
Q 039518 228 GVFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALER----GIGAMISALSTKQL-PYPSSSFEMVHCSRCR 302 (617)
Q Consensus 228 ~g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~er----g~~~~~~~~d~~~L-pf~d~sFDlV~~s~~l 302 (617)
+|.+|||+|||+|.++..+++.+.. ++++|+++.+++.|+++ ++...+..+|+.++ +...+.||+|++.-..
T Consensus 214 ~g~~VLDlg~GtG~~sl~~a~~ga~---V~avDis~~al~~a~~n~~~ng~~~~~~~~D~~~~l~~~~~~fD~Ii~dpP~ 290 (393)
T 4dmg_A 214 PGERVLDVYSYVGGFALRAARKGAY---ALAVDKDLEALGVLDQAALRLGLRVDIRHGEALPTLRGLEGPFHHVLLDPPT 290 (393)
T ss_dssp TTCEEEEESCTTTHHHHHHHHTTCE---EEEEESCHHHHHHHHHHHHHHTCCCEEEESCHHHHHHTCCCCEEEEEECCCC
T ss_pred CCCeEEEcccchhHHHHHHHHcCCe---EEEEECCHHHHHHHHHHHHHhCCCCcEEEccHHHHHHHhcCCCCEEEECCCc
Confidence 4678999999999999999998753 78889999999998875 66656777776443 2223349999986322
Q ss_pred ccc--------ccchHHHHHHHHHhccCCeEEEEEeCCCCCCCCCChhhHHHHHHHHHHcCceE
Q 039518 303 VDW--------HANDGILLKEVDRVLRPNGYFVYSAPPAYRKDKDYPLIWDKLVNLTTAMCWKL 358 (617)
Q Consensus 303 ~h~--------~~d~~~~L~el~RvLrPGG~Liis~p~~~~~~~~~~~~W~~le~La~~~gw~~ 358 (617)
..- ..+...++..+.++|+|||.+++++..... ......+.+...+...|.+.
T Consensus 291 f~~~~~~~~~~~~~~~~ll~~a~~~LkpGG~Lv~~s~s~~~---~~~~f~~~v~~a~~~~g~~~ 351 (393)
T 4dmg_A 291 LVKRPEELPAMKRHLVDLVREALRLLAEEGFLWLSSCSYHL---RLEDLLEVARRAAADLGRRL 351 (393)
T ss_dssp CCSSGGGHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCTTS---CHHHHHHHHHHHHHHHTCCE
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCCC---CHHHHHHHHHHHHHHhCCeE
Confidence 111 123457899999999999999987643221 11111233566666666543
No 216
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=98.78 E-value=9.5e-09 Score=106.27 Aligned_cols=101 Identities=14% Similarity=0.014 Sum_probs=75.3
Q ss_pred CCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHhC---------CCcEEEEecCCC-CCCCCCCeeEEEe
Q 039518 229 VFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALERG---------IGAMISALSTKQ-LPYPSSSFEMVHC 298 (617)
Q Consensus 229 g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~erg---------~~~~~~~~d~~~-Lpf~d~sFDlV~~ 298 (617)
+.+|||||||+|.++..+++... ...++++|+++.+++.|+++. .++.+..+|+.. ++..+++||+|++
T Consensus 91 ~~~VLdiG~G~G~~~~~l~~~~~-~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii~ 169 (296)
T 1inl_A 91 PKKVLIIGGGDGGTLREVLKHDS-VEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVRKFKNEFDVIII 169 (296)
T ss_dssp CCEEEEEECTTCHHHHHHTTSTT-CSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGGGCSSCEEEEEE
T ss_pred CCEEEEEcCCcCHHHHHHHhcCC-CCEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCceEEEE
Confidence 46799999999999999998732 237888999999999998763 357788887644 3444678999997
Q ss_pred ccccccccc-----chHHHHHHHHHhccCCeEEEEEeC
Q 039518 299 SRCRVDWHA-----NDGILLKEVDRVLRPNGYFVYSAP 331 (617)
Q Consensus 299 s~~l~h~~~-----d~~~~L~el~RvLrPGG~Liis~p 331 (617)
.. ..++.. ....+++++.++|+|||.+++...
T Consensus 170 d~-~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~ 206 (296)
T 1inl_A 170 DS-TDPTAGQGGHLFTEEFYQACYDALKEDGVFSAETE 206 (296)
T ss_dssp EC-----------CCSHHHHHHHHHHEEEEEEEEEECC
T ss_pred cC-CCcccCchhhhhHHHHHHHHHHhcCCCcEEEEEcc
Confidence 52 222111 226789999999999999999754
No 217
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=98.78 E-value=9.8e-10 Score=110.22 Aligned_cols=99 Identities=10% Similarity=-0.019 Sum_probs=74.1
Q ss_pred CCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHh----CC--CcEEEEecCCCC-CCC-----CCCeeEE
Q 039518 229 VFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALER----GI--GAMISALSTKQL-PYP-----SSSFEMV 296 (617)
Q Consensus 229 g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~er----g~--~~~~~~~d~~~L-pf~-----d~sFDlV 296 (617)
+.+|||||||+|..+..|++.......++++|+++.+++.|+++ +. ++.+..+|+... +.. +++||+|
T Consensus 61 ~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~~~~~~~~~~fD~V 140 (242)
T 3r3h_A 61 AKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAKQEHKIKLRLGPALDTLHSLLNEGGEHQFDFI 140 (242)
T ss_dssp CSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTTCTTTEEEEESCHHHHHHHHHHHHCSSCEEEE
T ss_pred cCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHhhccCCCCEeEE
Confidence 34699999999999999988532123677888888887766654 44 478888886443 221 4789999
Q ss_pred EecccccccccchHHHHHHHHHhccCCeEEEEEeC
Q 039518 297 HCSRCRVDWHANDGILLKEVDRVLRPNGYFVYSAP 331 (617)
Q Consensus 297 ~~s~~l~h~~~d~~~~L~el~RvLrPGG~Liis~p 331 (617)
++... ..+...++.++.++|||||++++...
T Consensus 141 ~~d~~----~~~~~~~l~~~~~~LkpGG~lv~d~~ 171 (242)
T 3r3h_A 141 FIDAD----KTNYLNYYELALKLVTPKGLIAIDNI 171 (242)
T ss_dssp EEESC----GGGHHHHHHHHHHHEEEEEEEEEECS
T ss_pred EEcCC----hHHhHHHHHHHHHhcCCCeEEEEECC
Confidence 97532 34567799999999999999999754
No 218
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=98.78 E-value=7.4e-09 Score=106.33 Aligned_cols=102 Identities=14% Similarity=0.097 Sum_probs=77.5
Q ss_pred CCCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHhC---------CCcEEEEecCCCC-CCCCCCeeEEE
Q 039518 228 GVFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALERG---------IGAMISALSTKQL-PYPSSSFEMVH 297 (617)
Q Consensus 228 ~g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~erg---------~~~~~~~~d~~~L-pf~d~sFDlV~ 297 (617)
.+.+|||||||+|.++..+++... ...++++|+++.+++.|+++. .++.+..+|+... +..+++||+|+
T Consensus 78 ~~~~VLdiG~G~G~~~~~l~~~~~-~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii 156 (283)
T 2i7c_A 78 EPKNVLVVGGGDGGIIRELCKYKS-VENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVII 156 (283)
T ss_dssp SCCEEEEEECTTSHHHHHHTTCTT-CCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEE
T ss_pred CCCeEEEEeCCcCHHHHHHHHcCC-CCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECChHHHHHhCCCCceEEE
Confidence 456899999999999999987742 237888999999999999863 3467777776442 22367899999
Q ss_pred eccccccccc--ch--HHHHHHHHHhccCCeEEEEEeC
Q 039518 298 CSRCRVDWHA--ND--GILLKEVDRVLRPNGYFVYSAP 331 (617)
Q Consensus 298 ~s~~l~h~~~--d~--~~~L~el~RvLrPGG~Liis~p 331 (617)
+.. ..++.. .. ..+++++.++|+|||.+++...
T Consensus 157 ~d~-~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~~ 193 (283)
T 2i7c_A 157 VDS-SDPIGPAETLFNQNFYEKIYNALKPNGYCVAQCE 193 (283)
T ss_dssp EEC-CCTTTGGGGGSSHHHHHHHHHHEEEEEEEEEECC
T ss_pred EcC-CCCCCcchhhhHHHHHHHHHHhcCCCcEEEEECC
Confidence 853 233321 11 6899999999999999999754
No 219
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=98.77 E-value=1.1e-08 Score=106.71 Aligned_cols=101 Identities=15% Similarity=0.056 Sum_probs=77.8
Q ss_pred CCCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHhC----------CCcEEEEecCCC-CCCCCCCeeEE
Q 039518 228 GVFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALERG----------IGAMISALSTKQ-LPYPSSSFEMV 296 (617)
Q Consensus 228 ~g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~erg----------~~~~~~~~d~~~-Lpf~d~sFDlV 296 (617)
.+.+|||||||+|.++..+++... ...++++|+++.+++.|+++. .++.+..+|+.. ++..+++||+|
T Consensus 77 ~~~~VLdiG~G~G~~~~~l~~~~~-~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~I 155 (314)
T 1uir_A 77 EPKRVLIVGGGEGATLREVLKHPT-VEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLERTEERYDVV 155 (314)
T ss_dssp CCCEEEEEECTTSHHHHHHTTSTT-CCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHHHCCCCEEEE
T ss_pred CCCeEEEEcCCcCHHHHHHHhcCC-CCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHHHHHhcCCCccEE
Confidence 346799999999999999998732 237888999999999998752 347788888654 34456789999
Q ss_pred Eeccccccc---c--cc--hHHHHHHHHHhccCCeEEEEEe
Q 039518 297 HCSRCRVDW---H--AN--DGILLKEVDRVLRPNGYFVYSA 330 (617)
Q Consensus 297 ~~s~~l~h~---~--~d--~~~~L~el~RvLrPGG~Liis~ 330 (617)
++.. ..++ . .. ...+++++.++|+|||.+++..
T Consensus 156 i~d~-~~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 195 (314)
T 1uir_A 156 IIDL-TDPVGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQT 195 (314)
T ss_dssp EEEC-CCCBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEEE
T ss_pred EECC-CCcccccCcchhccHHHHHHHHHHhcCCCcEEEEEc
Confidence 9864 3344 1 11 3689999999999999999874
No 220
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=98.77 E-value=8.6e-09 Score=107.73 Aligned_cols=100 Identities=12% Similarity=0.029 Sum_probs=73.3
Q ss_pred CCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHhC---------CCcEEEEecCCC-CCCCCCCeeEEEe
Q 039518 229 VFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALERG---------IGAMISALSTKQ-LPYPSSSFEMVHC 298 (617)
Q Consensus 229 g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~erg---------~~~~~~~~d~~~-Lpf~d~sFDlV~~ 298 (617)
+.+|||||||+|.++..+++... ...++.+|+++.+++.|+++. .++.+..+|+.. ++..+++||+|++
T Consensus 109 ~~~VLdIG~G~G~~~~~l~~~~~-~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii~ 187 (314)
T 2b2c_A 109 PKRVLIIGGGDGGILREVLKHES-VEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKNHKNEFDVIIT 187 (314)
T ss_dssp CCEEEEESCTTSHHHHHHTTCTT-CCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHHHCTTCEEEEEE
T ss_pred CCEEEEEcCCcCHHHHHHHHcCC-CCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEEChHHHHHHhcCCCceEEEE
Confidence 46799999999999999998732 337888999999999999863 236777777644 3334678999997
Q ss_pred cccccccccch----HHHHHHHHHhccCCeEEEEEe
Q 039518 299 SRCRVDWHAND----GILLKEVDRVLRPNGYFVYSA 330 (617)
Q Consensus 299 s~~l~h~~~d~----~~~L~el~RvLrPGG~Liis~ 330 (617)
.. ..++.... ..+++++.++|+|||.+++..
T Consensus 188 d~-~~~~~~~~~l~t~~~l~~~~~~LkpgG~lv~~~ 222 (314)
T 2b2c_A 188 DS-SDPVGPAESLFGQSYYELLRDALKEDGILSSQG 222 (314)
T ss_dssp CC-C-------------HHHHHHHHEEEEEEEEEEC
T ss_pred cC-CCCCCcchhhhHHHHHHHHHhhcCCCeEEEEEC
Confidence 53 33332111 578999999999999999975
No 221
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=98.76 E-value=9.6e-09 Score=106.77 Aligned_cols=101 Identities=11% Similarity=0.052 Sum_probs=75.5
Q ss_pred CCCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHhC---------CCcEEEEecCCC-CCCCCCCeeEEE
Q 039518 228 GVFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALERG---------IGAMISALSTKQ-LPYPSSSFEMVH 297 (617)
Q Consensus 228 ~g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~erg---------~~~~~~~~d~~~-Lpf~d~sFDlV~ 297 (617)
.+.+|||||||+|.++..++++.. ...++.+|+++.+++.|+++. .++.+..+|+.. ++..+++||+|+
T Consensus 95 ~~~~VLdiG~G~G~~~~~l~~~~~-~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~fD~Ii 173 (304)
T 2o07_A 95 NPRKVLIIGGGDGGVLREVVKHPS-VESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEFMKQNQDAFDVII 173 (304)
T ss_dssp SCCEEEEEECTTSHHHHHHTTCTT-CCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHTCSSCEEEEE
T ss_pred CCCEEEEECCCchHHHHHHHHcCC-CCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHhhCCCCceEEE
Confidence 456899999999999999998742 237888999999999998752 347788887644 344567899999
Q ss_pred eccccccccc----chHHHHHHHHHhccCCeEEEEEe
Q 039518 298 CSRCRVDWHA----NDGILLKEVDRVLRPNGYFVYSA 330 (617)
Q Consensus 298 ~s~~l~h~~~----d~~~~L~el~RvLrPGG~Liis~ 330 (617)
+.. ..++.. ....+++++.++|+|||.+++..
T Consensus 174 ~d~-~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 209 (304)
T 2o07_A 174 TDS-SDPMGPAESLFKESYYQLMKTALKEDGVLCCQG 209 (304)
T ss_dssp EEC-C-----------CHHHHHHHHHEEEEEEEEEEE
T ss_pred ECC-CCCCCcchhhhHHHHHHHHHhccCCCeEEEEec
Confidence 753 233221 12468999999999999999976
No 222
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=98.75 E-value=1.2e-08 Score=106.80 Aligned_cols=120 Identities=12% Similarity=0.154 Sum_probs=85.1
Q ss_pred hHHHHHHHhhhhh---ccCCcccCCCCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHhC-----CCcEE
Q 039518 207 PEYIQRLGNMMTN---ETGNLRSAGVFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALERG-----IGAMI 278 (617)
Q Consensus 207 ~~Y~~~L~~~L~~---~~~~lr~~~g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~erg-----~~~~~ 278 (617)
-.|.+.+...+.. .... ....+|||||||+|.++.+++++.... .++.+|+++.+++.|+++. .++.+
T Consensus 68 ~~Y~e~m~~~~~~l~~~~p~---p~~~rVLdIG~G~G~la~~la~~~p~~-~v~~VEidp~vi~~Ar~~~~~~~~~rv~v 143 (317)
T 3gjy_A 68 FEYMRWIATGARAFIDAHQD---ASKLRITHLGGGACTMARYFADVYPQS-RNTVVELDAELARLSREWFDIPRAPRVKI 143 (317)
T ss_dssp SHHHHHHHHHHHHHHHHHSC---GGGCEEEEESCGGGHHHHHHHHHSTTC-EEEEEESCHHHHHHHHHHSCCCCTTTEEE
T ss_pred hHHHHHHHHHHHhhcccCCC---CCCCEEEEEECCcCHHHHHHHHHCCCc-EEEEEECCHHHHHHHHHhccccCCCceEE
Confidence 3677766655432 1111 012379999999999999999843322 6788999999999999873 24778
Q ss_pred EEecCCCC--CCCCCCeeEEEecccccccc-c---chHHHHHHHHHhccCCeEEEEEeC
Q 039518 279 SALSTKQL--PYPSSSFEMVHCSRCRVDWH-A---NDGILLKEVDRVLRPNGYFVYSAP 331 (617)
Q Consensus 279 ~~~d~~~L--pf~d~sFDlV~~s~~l~h~~-~---d~~~~L~el~RvLrPGG~Liis~p 331 (617)
.++|...+ .+++++||+|++.. ..+.. . ....+++++.++|+|||.|++...
T Consensus 144 ~~~Da~~~l~~~~~~~fDvIi~D~-~~~~~~~~~L~t~efl~~~~r~LkpgGvlv~~~~ 201 (317)
T 3gjy_A 144 RVDDARMVAESFTPASRDVIIRDV-FAGAITPQNFTTVEFFEHCHRGLAPGGLYVANCG 201 (317)
T ss_dssp EESCHHHHHHTCCTTCEEEEEECC-STTSCCCGGGSBHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EECcHHHHHhhccCCCCCEEEECC-CCccccchhhhHHHHHHHHHHhcCCCcEEEEEec
Confidence 88886543 34568899999753 22221 1 136899999999999999998763
No 223
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=98.75 E-value=1e-08 Score=107.33 Aligned_cols=102 Identities=15% Similarity=0.122 Sum_probs=76.9
Q ss_pred CCCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHhC---------CCcEEEEecCCC-CCCCCCCeeEEE
Q 039518 228 GVFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALERG---------IGAMISALSTKQ-LPYPSSSFEMVH 297 (617)
Q Consensus 228 ~g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~erg---------~~~~~~~~d~~~-Lpf~d~sFDlV~ 297 (617)
.+.+|||||||+|.++..+++... ...++++|+++.+++.|+++. .++.+..+|... ++..+++||+|+
T Consensus 116 ~~~~VLdiG~G~G~~~~~l~~~~~-~~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fDvIi 194 (321)
T 2pt6_A 116 EPKNVLVVGGGDGGIIRELCKYKS-VENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVII 194 (321)
T ss_dssp SCCEEEEEECTTCHHHHHHTTCTT-CCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEE
T ss_pred CCCEEEEEcCCccHHHHHHHHcCC-CCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEccHHHHHhhcCCCceEEE
Confidence 346799999999999999998632 237888999999999999863 246777777644 233457899999
Q ss_pred ecccccccc--cc--hHHHHHHHHHhccCCeEEEEEeC
Q 039518 298 CSRCRVDWH--AN--DGILLKEVDRVLRPNGYFVYSAP 331 (617)
Q Consensus 298 ~s~~l~h~~--~d--~~~~L~el~RvLrPGG~Liis~p 331 (617)
+.. ..++. .. ...+++++.++|+|||.+++...
T Consensus 195 ~d~-~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~ 231 (321)
T 2pt6_A 195 VDS-SDPIGPAETLFNQNFYEKIYNALKPNGYCVAQCE 231 (321)
T ss_dssp EEC-CCSSSGGGGGSSHHHHHHHHHHEEEEEEEEEEEC
T ss_pred ECC-cCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcC
Confidence 763 22322 11 16899999999999999999764
No 224
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=98.75 E-value=3.9e-09 Score=105.38 Aligned_cols=100 Identities=10% Similarity=0.186 Sum_probs=65.3
Q ss_pred CCCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHh----CCC--cEEEEecCCCC---CCC---CCCeeE
Q 039518 228 GVFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALER----GIG--AMISALSTKQL---PYP---SSSFEM 295 (617)
Q Consensus 228 ~g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~er----g~~--~~~~~~d~~~L---pf~---d~sFDl 295 (617)
++.+|||+|||+|.++..++++.. ...++++|+++.+++.|+++ +.. +.+..+|+.+. +++ +++||+
T Consensus 65 ~~~~vLDlG~G~G~~~~~la~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD~ 143 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLGATLN-GWYFLATEVDDMCFNYAKKNVEQNNLSDLIKVVKVPQKTLLMDALKEESEIIYDF 143 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHHHHHH-CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTCSSTTTSTTCCSCCBSE
T ss_pred CCCEEEEeCCChhHHHHHHHHhCC-CCeEEEEECCHHHHHHHHHHHHHcCCCccEEEEEcchhhhhhhhhhcccCCcccE
Confidence 466899999999999998887621 13678889999999999875 443 78888887652 444 268999
Q ss_pred EEeccccccccc--------------chHHHHHHHHHhccCCeEEEE
Q 039518 296 VHCSRCRVDWHA--------------NDGILLKEVDRVLRPNGYFVY 328 (617)
Q Consensus 296 V~~s~~l~h~~~--------------d~~~~L~el~RvLrPGG~Lii 328 (617)
|+|+...++... ....++.++.|+|||||.+.+
T Consensus 144 i~~npp~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~LkpgG~l~~ 190 (254)
T 2h00_A 144 CMCNPPFFANQLEAKGVNSRNPRRPPPSSVNTGGITEIMAEGGELEF 190 (254)
T ss_dssp EEECCCCC-------------------------CTTTTHHHHTHHHH
T ss_pred EEECCCCccCcchhcccccccccccCCHHHHhhhHHHHEecCCEEEE
Confidence 999854433220 112345566666666665544
No 225
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=98.75 E-value=4.6e-09 Score=105.61 Aligned_cols=98 Identities=10% Similarity=0.048 Sum_probs=75.0
Q ss_pred CCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHh----CC--CcEEEEecCCC-CCC------CCCCeeE
Q 039518 229 VFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALER----GI--GAMISALSTKQ-LPY------PSSSFEM 295 (617)
Q Consensus 229 g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~er----g~--~~~~~~~d~~~-Lpf------~d~sFDl 295 (617)
+.+|||||||+|..+..|++.......++++|+++.+++.|+++ +. ++.+..+|+.+ ++. ++++||+
T Consensus 80 ~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~fD~ 159 (247)
T 1sui_A 80 AKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFREGPALPVLDEMIKDEKNHGSYDF 159 (247)
T ss_dssp CCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSGGGTTCBSE
T ss_pred cCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHHHHHHhccCCCCCEEE
Confidence 34699999999999999987632123788889999999998875 44 46777777643 232 1578999
Q ss_pred EEecccccccccchHHHHHHHHHhccCCeEEEEEe
Q 039518 296 VHCSRCRVDWHANDGILLKEVDRVLRPNGYFVYSA 330 (617)
Q Consensus 296 V~~s~~l~h~~~d~~~~L~el~RvLrPGG~Liis~ 330 (617)
|++... ..+...++.++.++|||||++++..
T Consensus 160 V~~d~~----~~~~~~~l~~~~~~LkpGG~lv~d~ 190 (247)
T 1sui_A 160 IFVDAD----KDNYLNYHKRLIDLVKVGGVIGYDN 190 (247)
T ss_dssp EEECSC----STTHHHHHHHHHHHBCTTCCEEEEC
T ss_pred EEEcCc----hHHHHHHHHHHHHhCCCCeEEEEec
Confidence 997532 3467789999999999999999864
No 226
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=98.74 E-value=5e-09 Score=102.56 Aligned_cols=100 Identities=10% Similarity=0.017 Sum_probs=75.2
Q ss_pred CCCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHh----CC--CcEEEEecCCCC-C-CCC----CCeeE
Q 039518 228 GVFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALER----GI--GAMISALSTKQL-P-YPS----SSFEM 295 (617)
Q Consensus 228 ~g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~er----g~--~~~~~~~d~~~L-p-f~d----~sFDl 295 (617)
++.+|||||||+|.++..+++.......++++|+++.+++.|+++ +. ++.+..+|+.+. + +++ ++||+
T Consensus 69 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~~~~~~~~~~D~ 148 (229)
T 2avd_A 69 QAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPALETLDELLAAGEAGTFDV 148 (229)
T ss_dssp TCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCTTCEEE
T ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCeEEEEEcCHHHHHHHHHhcCCCCCccE
Confidence 345799999999999999998632223788889999999988875 43 577777775332 1 111 68999
Q ss_pred EEecccccccccchHHHHHHHHHhccCCeEEEEEeC
Q 039518 296 VHCSRCRVDWHANDGILLKEVDRVLRPNGYFVYSAP 331 (617)
Q Consensus 296 V~~s~~l~h~~~d~~~~L~el~RvLrPGG~Liis~p 331 (617)
|++... ..+...++.++.++|+|||.+++...
T Consensus 149 v~~d~~----~~~~~~~l~~~~~~L~pgG~lv~~~~ 180 (229)
T 2avd_A 149 AVVDAD----KENCSAYYERCLQLLRPGGILAVLRV 180 (229)
T ss_dssp EEECSC----STTHHHHHHHHHHHEEEEEEEEEECC
T ss_pred EEECCC----HHHHHHHHHHHHHHcCCCeEEEEECC
Confidence 997532 33567899999999999999999653
No 227
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=98.74 E-value=2.1e-08 Score=110.60 Aligned_cols=123 Identities=14% Similarity=0.191 Sum_probs=86.3
Q ss_pred CCCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHh----CC-CcEEEEecCCCCCC-CCCCeeEEEec--
Q 039518 228 GVFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALER----GI-GAMISALSTKQLPY-PSSSFEMVHCS-- 299 (617)
Q Consensus 228 ~g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~er----g~-~~~~~~~d~~~Lpf-~d~sFDlV~~s-- 299 (617)
++.+|||+|||+|..+..|++.-.....+.++|+++.+++.++++ |+ ++.+...|+..++. .+++||.|++.
T Consensus 117 ~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~~r~g~~nv~~~~~D~~~~~~~~~~~fD~Il~D~P 196 (479)
T 2frx_A 117 APQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANISRCGISNVALTHFDGRVFGAAVPEMFDAILLDAP 196 (479)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCCSTTHHHHSTTCEEEEEEECC
T ss_pred CCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCCHHHhhhhccccCCEEEECCC
Confidence 677899999999999999988622122678889999999988775 55 47777888877653 46789999972
Q ss_pred --c--ccc-------cccc--------chHHHHHHHHHhccCCeEEEEEeCCCCCCCCCChhhHHHHHHHHHHcC
Q 039518 300 --R--CRV-------DWHA--------NDGILLKEVDRVLRPNGYFVYSAPPAYRKDKDYPLIWDKLVNLTTAMC 355 (617)
Q Consensus 300 --~--~l~-------h~~~--------d~~~~L~el~RvLrPGG~Liis~p~~~~~~~~~~~~W~~le~La~~~g 355 (617)
. .+. +|.. ....+|.++.++|||||+|++++-..... ++. +.+..++++.+
T Consensus 197 cSg~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~LvysTcs~~~~--Ene---~vv~~~l~~~~ 266 (479)
T 2frx_A 197 CSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRPGGTLVYSTCTLNQE--ENE---AVCLWLKETYP 266 (479)
T ss_dssp CCCGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCSST--TTH---HHHHHHHHHST
T ss_pred cCCcccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhcCCCCEEEEecccCCcc--cCH---HHHHHHHHHCC
Confidence 1 111 1110 02367999999999999999998644322 222 23566666654
No 228
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=98.74 E-value=8.8e-09 Score=105.77 Aligned_cols=101 Identities=10% Similarity=0.025 Sum_probs=70.5
Q ss_pred CeEEEECCCC--cHHHHHhccC-CCcEEEeeecCCcHHHHHHHHHhCC-----CcEEEEecCCCCC----CC--CCCee-
Q 039518 230 FQVLDVGCGV--ASFSAFLLPL-DIQTMSFAPKDGHENQIQFALERGI-----GAMISALSTKQLP----YP--SSSFE- 294 (617)
Q Consensus 230 ~rVLDIGCGt--G~~a~~La~~-gv~~v~v~~iDis~~~lq~A~erg~-----~~~~~~~d~~~Lp----f~--d~sFD- 294 (617)
.+|||||||+ +..+..++++ ... ..+.++|.|+.|++.|+++-. ++.+..+|+.+++ .+ .++||
T Consensus 80 ~q~LDLGcG~pT~~~~~~la~~~~P~-arVv~VD~sp~mLa~Ar~~l~~~~~~~~~~v~aD~~~~~~~l~~~~~~~~~D~ 158 (277)
T 3giw_A 80 RQFLDIGTGIPTSPNLHEIAQSVAPE-SRVVYVDNDPIVLTLSQGLLASTPEGRTAYVEADMLDPASILDAPELRDTLDL 158 (277)
T ss_dssp CEEEEESCCSCCSSCHHHHHHHHCTT-CEEEEEECCHHHHHTTHHHHCCCSSSEEEEEECCTTCHHHHHTCHHHHTTCCT
T ss_pred CEEEEeCCCCCcccHHHHHHHHHCCC-CEEEEEeCChHHHHHHHHHhccCCCCcEEEEEecccChhhhhcccccccccCc
Confidence 4699999997 3233444332 222 278889999999999988621 3778888887752 11 34455
Q ss_pred ----EEEecccccccccc--hHHHHHHHHHhccCCeEEEEEeC
Q 039518 295 ----MVHCSRCRVDWHAN--DGILLKEVDRVLRPNGYFVYSAP 331 (617)
Q Consensus 295 ----lV~~s~~l~h~~~d--~~~~L~el~RvLrPGG~Liis~p 331 (617)
.|+++.++|+..+. +..++.++.+.|+|||+|+++..
T Consensus 159 ~~p~av~~~avLH~l~d~~~p~~~l~~l~~~L~PGG~Lvls~~ 201 (277)
T 3giw_A 159 TRPVALTVIAIVHFVLDEDDAVGIVRRLLEPLPSGSYLAMSIG 201 (277)
T ss_dssp TSCCEEEEESCGGGSCGGGCHHHHHHHHHTTSCTTCEEEEEEE
T ss_pred CCcchHHhhhhHhcCCchhhHHHHHHHHHHhCCCCcEEEEEec
Confidence 46666555554422 57899999999999999999864
No 229
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=98.73 E-value=6.9e-09 Score=100.43 Aligned_cols=95 Identities=13% Similarity=0.040 Sum_probs=68.0
Q ss_pred CCCCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHhCCCcEEEEecCCCCCCC-----------CCCeeE
Q 039518 227 AGVFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALERGIGAMISALSTKQLPYP-----------SSSFEM 295 (617)
Q Consensus 227 ~~g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~erg~~~~~~~~d~~~Lpf~-----------d~sFDl 295 (617)
.++.+|||+|||+|.++..+++++. .+.++|+++.. ...++.+..+|+.+.+.. .++||+
T Consensus 24 ~~g~~VLDlG~G~G~~s~~la~~~~---~V~gvD~~~~~------~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~~D~ 94 (191)
T 3dou_A 24 RKGDAVIEIGSSPGGWTQVLNSLAR---KIISIDLQEME------EIAGVRFIRCDIFKETIFDDIDRALREEGIEKVDD 94 (191)
T ss_dssp CTTCEEEEESCTTCHHHHHHTTTCS---EEEEEESSCCC------CCTTCEEEECCTTSSSHHHHHHHHHHHHTCSSEEE
T ss_pred CCCCEEEEEeecCCHHHHHHHHcCC---cEEEEeccccc------cCCCeEEEEccccCHHHHHHHHHHhhcccCCcceE
Confidence 4677899999999999999998843 56677877542 123578888898776521 148999
Q ss_pred EEecccc---cccccc-------hHHHHHHHHHhccCCeEEEEEe
Q 039518 296 VHCSRCR---VDWHAN-------DGILLKEVDRVLRPNGYFVYSA 330 (617)
Q Consensus 296 V~~s~~l---~h~~~d-------~~~~L~el~RvLrPGG~Liis~ 330 (617)
|+|.... .++..+ ...++.++.++|||||.|++..
T Consensus 95 Vlsd~~~~~~g~~~~d~~~~~~l~~~~l~~a~~~LkpGG~lv~k~ 139 (191)
T 3dou_A 95 VVSDAMAKVSGIPSRDHAVSYQIGQRVMEIAVRYLRNGGNVLLKQ 139 (191)
T ss_dssp EEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EecCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEE
Confidence 9985321 111111 2467899999999999999865
No 230
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=98.73 E-value=3.1e-08 Score=106.28 Aligned_cols=125 Identities=10% Similarity=0.039 Sum_probs=89.1
Q ss_pred CCCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHh----CC---CcEEEEecCCCCCC----CCCCeeEE
Q 039518 228 GVFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALER----GI---GAMISALSTKQLPY----PSSSFEMV 296 (617)
Q Consensus 228 ~g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~er----g~---~~~~~~~d~~~Lpf----~d~sFDlV 296 (617)
++.+|||+|||+|.++..+++.+.. .+.++|+++.+++.|+++ ++ ++.+..+|+.++.. ..++||+|
T Consensus 220 ~~~~VLDl~cG~G~~sl~la~~g~~--~V~~vD~s~~al~~a~~n~~~ngl~~~~v~~~~~D~~~~~~~~~~~~~~fD~I 297 (396)
T 3c0k_A 220 ENKRVLNCFSYTGGFAVSALMGGCS--QVVSVDTSQEALDIARQNVELNKLDLSKAEFVRDDVFKLLRTYRDRGEKFDVI 297 (396)
T ss_dssp TTCEEEEESCTTCSHHHHHHHTTCS--EEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHHTTCCEEEE
T ss_pred CCCeEEEeeccCCHHHHHHHHCCCC--EEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHhcCCCCCEE
Confidence 4567999999999999999988632 688899999999988875 55 57888888655421 14689999
Q ss_pred Eecccc--------cccccchHHHHHHHHHhccCCeEEEEEeCCCCCCCCCChhhHHH-HHHHHHHcCceE
Q 039518 297 HCSRCR--------VDWHANDGILLKEVDRVLRPNGYFVYSAPPAYRKDKDYPLIWDK-LVNLTTAMCWKL 358 (617)
Q Consensus 297 ~~s~~l--------~h~~~d~~~~L~el~RvLrPGG~Liis~p~~~~~~~~~~~~W~~-le~La~~~gw~~ 358 (617)
++.--. .........++.++.++|+|||.++++..+.... ...|.. +.+.+...|++.
T Consensus 298 i~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~----~~~~~~~i~~~~~~~g~~~ 364 (396)
T 3c0k_A 298 VMDPPKFVENKSQLMGACRGYKDINMLAIQLLNEGGILLTFSCSGLMT----SDLFQKIIADAAIDAGRDV 364 (396)
T ss_dssp EECCSSTTTCSSSSSCCCTHHHHHHHHHHHTEEEEEEEEEEECCTTCC----HHHHHHHHHHHHHHHTCCE
T ss_pred EECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCcCC----HHHHHHHHHHHHHHcCCeE
Confidence 986322 1112356788999999999999999987543322 112333 555667777543
No 231
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=98.73 E-value=1e-08 Score=112.48 Aligned_cols=129 Identities=13% Similarity=0.097 Sum_probs=89.1
Q ss_pred CCCCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHh----CCC-cEEEEecCCCCC-CCCCCeeEEEecc
Q 039518 227 AGVFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALER----GIG-AMISALSTKQLP-YPSSSFEMVHCSR 300 (617)
Q Consensus 227 ~~g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~er----g~~-~~~~~~d~~~Lp-f~d~sFDlV~~s~ 300 (617)
.++.+|||+|||+|..+..|+++-.....+.++|+++.+++.++++ |+. +.+...|...++ ..+++||+|++.-
T Consensus 104 ~~g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~g~~nv~v~~~Da~~l~~~~~~~FD~Il~Da 183 (456)
T 3m4x_A 104 KPGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERWGVSNAIVTNHAPAELVPHFSGFFDRIVVDA 183 (456)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHTCSSEEEECCCHHHHHHHHTTCEEEEEEEC
T ss_pred CCCCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCceEEEeCCHHHhhhhccccCCEEEECC
Confidence 4677899999999999999987521112677889999999888765 553 666667766654 2457899999631
Q ss_pred c---ccccccc------------------hHHHHHHHHHhccCCeEEEEEeCCCCCCCCCChhhHHHHHHHHHHcCceEE
Q 039518 301 C---RVDWHAN------------------DGILLKEVDRVLRPNGYFVYSAPPAYRKDKDYPLIWDKLVNLTTAMCWKLI 359 (617)
Q Consensus 301 ~---l~h~~~d------------------~~~~L~el~RvLrPGG~Liis~p~~~~~~~~~~~~W~~le~La~~~gw~~v 359 (617)
- .-.+..+ ...+|.++.++|||||.|++++-..... ++ -+.+..++++.+|+++
T Consensus 184 PCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvYsTCs~~~e--En---e~vv~~~l~~~~~~l~ 258 (456)
T 3m4x_A 184 PCSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKNKGQLIYSTCTFAPE--EN---EEIISWLVENYPVTIE 258 (456)
T ss_dssp CCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEEEEEEEEEESCCCGG--GT---HHHHHHHHHHSSEEEE
T ss_pred CCCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEEeecccc--cC---HHHHHHHHHhCCCEEE
Confidence 1 0111111 1267999999999999999988644322 22 2347788888887665
Q ss_pred E
Q 039518 360 A 360 (617)
Q Consensus 360 ~ 360 (617)
.
T Consensus 259 ~ 259 (456)
T 3m4x_A 259 E 259 (456)
T ss_dssp C
T ss_pred e
Confidence 4
No 232
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=98.72 E-value=3.3e-09 Score=110.42 Aligned_cols=100 Identities=17% Similarity=0.192 Sum_probs=65.1
Q ss_pred cCCCCeEEEECCCCcHHHHHhccCCCcEEEeeecCC----cHHHHHHHH-H-hC-CCcEEEEe-cCCCCCCCCCCeeEEE
Q 039518 226 SAGVFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDG----HENQIQFAL-E-RG-IGAMISAL-STKQLPYPSSSFEMVH 297 (617)
Q Consensus 226 ~~~g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDi----s~~~lq~A~-e-rg-~~~~~~~~-d~~~Lpf~d~sFDlV~ 297 (617)
+.++.+|||+|||+|.++..+++++ . |.++|+ ++.++..+. + .+ ..+.+..+ |+..+| .++||+|+
T Consensus 80 ~~~g~~VLDlGcG~G~~s~~la~~~-~---V~gvD~~~~~~~~~~~~~~~~~~~~~~v~~~~~~D~~~l~--~~~fD~V~ 153 (305)
T 2p41_A 80 VTPEGKVVDLGCGRGGWSYYCGGLK-N---VREVKGLTKGGPGHEEPIPMSTYGWNLVRLQSGVDVFFIP--PERCDTLL 153 (305)
T ss_dssp SCCCEEEEEETCTTSHHHHHHHTST-T---EEEEEEECCCSTTSCCCCCCCSTTGGGEEEECSCCTTTSC--CCCCSEEE
T ss_pred CCCCCEEEEEcCCCCHHHHHHHhcC-C---EEEEeccccCchhHHHHHHhhhcCCCCeEEEeccccccCC--cCCCCEEE
Confidence 3567889999999999999999883 2 334454 222221111 1 11 23566666 666654 56899999
Q ss_pred eccccc--ccccchH---HHHHHHHHhccCCeEEEEEeC
Q 039518 298 CSRCRV--DWHANDG---ILLKEVDRVLRPNGYFVYSAP 331 (617)
Q Consensus 298 ~s~~l~--h~~~d~~---~~L~el~RvLrPGG~Liis~p 331 (617)
|..+.. ++..+.. .+|.++.++|||||.|++...
T Consensus 154 sd~~~~~g~~~~d~~~~l~~L~~~~~~LkpGG~~v~kv~ 192 (305)
T 2p41_A 154 CDIGESSPNPTVEAGRTLRVLNLVENWLSNNTQFCVKVL 192 (305)
T ss_dssp ECCCCCCSSHHHHHHHHHHHHHHHHHHCCTTCEEEEEES
T ss_pred ECCccccCcchhhHHHHHHHHHHHHHHhCCCCEEEEEeC
Confidence 965432 2221222 478999999999999998653
No 233
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=98.70 E-value=2.1e-08 Score=102.06 Aligned_cols=92 Identities=14% Similarity=0.118 Sum_probs=74.3
Q ss_pred CCCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHhC---------CCcEEEEecCCCCCCCCCCeeEEEe
Q 039518 228 GVFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALERG---------IGAMISALSTKQLPYPSSSFEMVHC 298 (617)
Q Consensus 228 ~g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~erg---------~~~~~~~~d~~~Lpf~d~sFDlV~~ 298 (617)
.+.+|||||||+|.++..+++.+ ..++.+|+++.+++.|+++. .++.+..+|..... ++||+|++
T Consensus 72 ~~~~VL~iG~G~G~~~~~ll~~~---~~v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~~~D~~~~~---~~fD~Ii~ 145 (262)
T 2cmg_A 72 ELKEVLIVDGFDLELAHQLFKYD---THIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLDI---KKYDLIFC 145 (262)
T ss_dssp CCCEEEEESSCCHHHHHHHTTSS---CEEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEESSGGGSCC---CCEEEEEE
T ss_pred CCCEEEEEeCCcCHHHHHHHhCC---CEEEEEECCHHHHHHHHHHHHhhccccCCCeEEEEechHHHHH---hhCCEEEE
Confidence 34689999999999999998873 48889999999999987652 24677777776554 78999997
Q ss_pred cccccccccchHHHHHHHHHhccCCeEEEEEeC
Q 039518 299 SRCRVDWHANDGILLKEVDRVLRPNGYFVYSAP 331 (617)
Q Consensus 299 s~~l~h~~~d~~~~L~el~RvLrPGG~Liis~p 331 (617)
.. .++..+++++.++|+|||.+++...
T Consensus 146 d~------~dp~~~~~~~~~~L~pgG~lv~~~~ 172 (262)
T 2cmg_A 146 LQ------EPDIHRIDGLKRMLKEDGVFISVAK 172 (262)
T ss_dssp SS------CCCHHHHHHHHTTEEEEEEEEEEEE
T ss_pred CC------CChHHHHHHHHHhcCCCcEEEEEcC
Confidence 52 2556699999999999999999753
No 234
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=98.70 E-value=1.7e-08 Score=103.53 Aligned_cols=99 Identities=15% Similarity=0.077 Sum_probs=74.5
Q ss_pred CCCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHhC---------------CCcEEEEecCCC-CCCCCC
Q 039518 228 GVFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALERG---------------IGAMISALSTKQ-LPYPSS 291 (617)
Q Consensus 228 ~g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~erg---------------~~~~~~~~d~~~-Lpf~d~ 291 (617)
.+.+|||||||+|.++..+++.+ ...++++|+++.+++.|+++. .++.+..+|+.. ++. ++
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~~~~--~~~v~~vDid~~~i~~ar~~~~~~~~l~~~~~~~~~~~v~~~~~D~~~~l~~-~~ 151 (281)
T 1mjf_A 75 KPKRVLVIGGGDGGTVREVLQHD--VDEVIMVEIDEDVIMVSKDLIKIDNGLLEAMLNGKHEKAKLTIGDGFEFIKN-NR 151 (281)
T ss_dssp CCCEEEEEECTTSHHHHHHTTSC--CSEEEEEESCHHHHHHHHHHTCTTTTHHHHHHTTCCSSEEEEESCHHHHHHH-CC
T ss_pred CCCeEEEEcCCcCHHHHHHHhCC--CCEEEEEECCHHHHHHHHHHHhhccccccccccCCCCcEEEEECchHHHhcc-cC
Confidence 34679999999999999999883 237888999999999998763 236677777533 222 57
Q ss_pred CeeEEEeccccccccc--c--hHHHHHHHHHhccCCeEEEEEe
Q 039518 292 SFEMVHCSRCRVDWHA--N--DGILLKEVDRVLRPNGYFVYSA 330 (617)
Q Consensus 292 sFDlV~~s~~l~h~~~--d--~~~~L~el~RvLrPGG~Liis~ 330 (617)
+||+|++... .++.. . ...+++++.++|+|||.+++..
T Consensus 152 ~fD~Ii~d~~-~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~ 193 (281)
T 1mjf_A 152 GFDVIIADST-DPVGPAKVLFSEEFYRYVYDALNNPGIYVTQA 193 (281)
T ss_dssp CEEEEEEECC-CCC-----TTSHHHHHHHHHHEEEEEEEEEEE
T ss_pred CeeEEEECCC-CCCCcchhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence 8999997642 23221 1 2678999999999999999975
No 235
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=98.69 E-value=3.1e-08 Score=106.12 Aligned_cols=124 Identities=12% Similarity=-0.038 Sum_probs=86.8
Q ss_pred CCCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHh----CC--CcEEEEecCCCCCC----CCCCeeEEE
Q 039518 228 GVFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALER----GI--GAMISALSTKQLPY----PSSSFEMVH 297 (617)
Q Consensus 228 ~g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~er----g~--~~~~~~~d~~~Lpf----~d~sFDlV~ 297 (617)
++.+|||+|||+|.++..+++.+.. .+.++|+++.+++.|+++ ++ ++.+..+|+.++.. ..++||+|+
T Consensus 217 ~~~~VLDl~~G~G~~~~~la~~g~~--~v~~vD~s~~~l~~a~~n~~~n~~~~~v~~~~~d~~~~~~~~~~~~~~fD~Vi 294 (396)
T 2as0_A 217 PGDRVLDVFTYTGGFAIHAAIAGAD--EVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAFEEMEKLQKKGEKFDIVV 294 (396)
T ss_dssp TTCEEEETTCTTTHHHHHHHHTTCS--EEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHTTCCEEEEE
T ss_pred CCCeEEEecCCCCHHHHHHHHCCCC--EEEEEeCCHHHHHHHHHHHHHcCCCccceEEECCHHHHHHHHHhhCCCCCEEE
Confidence 5667999999999999999987542 678889999999988775 44 57788888655421 256899999
Q ss_pred ecccccc--------cccchHHHHHHHHHhccCCeEEEEEeCCCCCCCCCChhhHHH-HHHHHHHcCce
Q 039518 298 CSRCRVD--------WHANDGILLKEVDRVLRPNGYFVYSAPPAYRKDKDYPLIWDK-LVNLTTAMCWK 357 (617)
Q Consensus 298 ~s~~l~h--------~~~d~~~~L~el~RvLrPGG~Liis~p~~~~~~~~~~~~W~~-le~La~~~gw~ 357 (617)
+..-... ...+...++.++.++|+|||.+++++...... ...|.. +.+.+...+..
T Consensus 295 ~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~~~----~~~~~~~v~~~~~~~~~~ 359 (396)
T 2as0_A 295 LDPPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDGGILVTCSCSQHVD----LQMFKDMIIAAGAKAGKF 359 (396)
T ss_dssp ECCCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEEEEEEEEECCTTSC----HHHHHHHHHHHHHHTTEE
T ss_pred ECCCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCCCCC----HHHHHHHHHHHHHHcCCe
Confidence 8532211 11345678999999999999999987543221 111322 44455555544
No 236
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=98.68 E-value=4.2e-08 Score=100.82 Aligned_cols=99 Identities=13% Similarity=0.122 Sum_probs=73.9
Q ss_pred CCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHh----CCC--cEEEEecCCCCCCCCCCe---eEEEec
Q 039518 229 VFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALER----GIG--AMISALSTKQLPYPSSSF---EMVHCS 299 (617)
Q Consensus 229 g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~er----g~~--~~~~~~d~~~Lpf~d~sF---DlV~~s 299 (617)
+.+|||+|||+|.++..++.. . ...++++|+++.+++.|+++ +.. +.+..+|.... ++ ++| |+|+++
T Consensus 124 ~~~vLDlG~GsG~~~~~la~~-~-~~~v~~vDis~~al~~A~~n~~~~~l~~~v~~~~~D~~~~-~~-~~f~~~D~Ivsn 199 (284)
T 1nv8_A 124 IKTVADIGTGSGAIGVSVAKF-S-DAIVFATDVSSKAVEIARKNAERHGVSDRFFVRKGEFLEP-FK-EKFASIEMILSN 199 (284)
T ss_dssp CCEEEEESCTTSHHHHHHHHH-S-SCEEEEEESCHHHHHHHHHHHHHTTCTTSEEEEESSTTGG-GG-GGTTTCCEEEEC
T ss_pred CCEEEEEeCchhHHHHHHHHC-C-CCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcchhh-cc-cccCCCCEEEEc
Confidence 346999999999999999987 2 23788899999999999876 443 78888887552 22 578 999997
Q ss_pred cccc-----------ccc-------cchHHHHHHHH-HhccCCeEEEEEeC
Q 039518 300 RCRV-----------DWH-------ANDGILLKEVD-RVLRPNGYFVYSAP 331 (617)
Q Consensus 300 ~~l~-----------h~~-------~d~~~~L~el~-RvLrPGG~Liis~p 331 (617)
--.+ |.+ .+...+++++. +.|+|||++++..+
T Consensus 200 PPyi~~~~~l~~~v~~ep~~al~~~~dgl~~~~~i~~~~l~pgG~l~~e~~ 250 (284)
T 1nv8_A 200 PPYVKSSAHLPKDVLFEPPEALFGGEDGLDFYREFFGRYDTSGKIVLMEIG 250 (284)
T ss_dssp CCCBCGGGSCTTSCCCSCHHHHBCTTTSCHHHHHHHHHCCCTTCEEEEECC
T ss_pred CCCCCcccccChhhccCcHHHhcCCCcHHHHHHHHHHhcCCCCCEEEEEEC
Confidence 2111 111 11236899999 99999999999754
No 237
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.68 E-value=3.4e-08 Score=113.82 Aligned_cols=104 Identities=15% Similarity=0.165 Sum_probs=80.7
Q ss_pred CCCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHh----CC---CcEEEEecCCC-CCCCCCCeeEEEec
Q 039518 228 GVFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALER----GI---GAMISALSTKQ-LPYPSSSFEMVHCS 299 (617)
Q Consensus 228 ~g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~er----g~---~~~~~~~d~~~-Lpf~d~sFDlV~~s 299 (617)
++.+|||+|||+|.++..++..+.. .++++|+|+.+++.|+++ ++ ++.+..+|+.+ ++...++||+|++.
T Consensus 539 ~g~~VLDlg~GtG~~sl~aa~~ga~--~V~aVD~s~~al~~a~~N~~~ngl~~~~v~~i~~D~~~~l~~~~~~fD~Ii~D 616 (703)
T 3v97_A 539 KGKDFLNLFSYTGSATVHAGLGGAR--STTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLREANEQFDLIFID 616 (703)
T ss_dssp TTCEEEEESCTTCHHHHHHHHTTCS--EEEEEESCHHHHHHHHHHHHHTTCCSTTEEEEESCHHHHHHHCCCCEEEEEEC
T ss_pred CCCcEEEeeechhHHHHHHHHCCCC--EEEEEeCCHHHHHHHHHHHHHcCCCccceEEEecCHHHHHHhcCCCccEEEEC
Confidence 4567999999999999999987753 578889999999999875 44 37788888654 34456789999985
Q ss_pred ccc----------cccccchHHHHHHHHHhccCCeEEEEEeCCC
Q 039518 300 RCR----------VDWHANDGILLKEVDRVLRPNGYFVYSAPPA 333 (617)
Q Consensus 300 ~~l----------~h~~~d~~~~L~el~RvLrPGG~Liis~p~~ 333 (617)
--. .....+...++.++.++|+|||+|+++....
T Consensus 617 PP~f~~~~~~~~~~~~~~~~~~ll~~a~~~LkpgG~L~~s~~~~ 660 (703)
T 3v97_A 617 PPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKR 660 (703)
T ss_dssp CCSBC-------CCBHHHHHHHHHHHHHHHEEEEEEEEEEECCT
T ss_pred CccccCCccchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCc
Confidence 321 1222345678999999999999999988643
No 238
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=98.68 E-value=2.8e-08 Score=104.49 Aligned_cols=124 Identities=15% Similarity=0.145 Sum_probs=88.9
Q ss_pred CCCeEEEECCCCcHHHHHhccCCCc----EEEeeecCCcHHHHHHHHHh----CCCcEEEEecCCCCCCCCCCeeEEEec
Q 039518 228 GVFQVLDVGCGVASFSAFLLPLDIQ----TMSFAPKDGHENQIQFALER----GIGAMISALSTKQLPYPSSSFEMVHCS 299 (617)
Q Consensus 228 ~g~rVLDIGCGtG~~a~~La~~gv~----~v~v~~iDis~~~lq~A~er----g~~~~~~~~d~~~Lpf~d~sFDlV~~s 299 (617)
++.+|||+|||+|.++..+++.... ...+.++|+++.+++.|+.+ +.++.+..+|+... .+.+.||+|+++
T Consensus 130 ~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~~g~~~~i~~~D~l~~-~~~~~fD~Ii~N 208 (344)
T 2f8l_A 130 KNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQRQKMTLLHQDGLAN-LLVDPVDVVISD 208 (344)
T ss_dssp SEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHHTCCCEEEESCTTSC-CCCCCEEEEEEE
T ss_pred CCCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHhCCCCceEEECCCCCc-cccCCccEEEEC
Confidence 4567999999999999888765321 25789999999999998874 66788888886543 346789999998
Q ss_pred ccccccccc----------------h-HHHHHHHHHhccCCeEEEEEeCCCCCCCCCChhhHHHHHHHHHHcCc
Q 039518 300 RCRVDWHAN----------------D-GILLKEVDRVLRPNGYFVYSAPPAYRKDKDYPLIWDKLVNLTTAMCW 356 (617)
Q Consensus 300 ~~l~h~~~d----------------~-~~~L~el~RvLrPGG~Liis~p~~~~~~~~~~~~W~~le~La~~~gw 356 (617)
-.+.++..+ . ..++..+.+.|+|||++++..|........ -..+.+.+.+.++
T Consensus 209 PPfg~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~Lk~gG~~~~v~p~~~~~~~~----~~~ir~~l~~~~~ 278 (344)
T 2f8l_A 209 LPVGYYPDDENAKTFELCREEGHSFAHFLFIEQGMRYTKPGGYLFFLVPDAMFGTSD----FAKVDKFIKKNGH 278 (344)
T ss_dssp CCCSEESCHHHHTTSTTCCSSSCEEHHHHHHHHHHHTEEEEEEEEEEEEGGGGGSTT----HHHHHHHHHHHEE
T ss_pred CCCCCcCchhhhhhccccCCCCcchHHHHHHHHHHHHhCCCCEEEEEECchhcCCch----HHHHHHHHHhCCe
Confidence 654333211 1 257999999999999999998754322221 2446666666665
No 239
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=98.68 E-value=1.5e-08 Score=101.06 Aligned_cols=98 Identities=9% Similarity=0.034 Sum_probs=74.6
Q ss_pred CCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHh----CC--CcEEEEecCCCC-C-C-----CCCCeeE
Q 039518 229 VFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALER----GI--GAMISALSTKQL-P-Y-----PSSSFEM 295 (617)
Q Consensus 229 g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~er----g~--~~~~~~~d~~~L-p-f-----~d~sFDl 295 (617)
+.+|||||||+|..+..+++.-.....++++|+++.+++.|+++ +. .+.+..+|+.+. + + ++++||+
T Consensus 71 ~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~fD~ 150 (237)
T 3c3y_A 71 AKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAGVEHKINFIESDAMLALDNLLQGQESEGSYDF 150 (237)
T ss_dssp CCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSTTCTTCEEE
T ss_pred CCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhccCCCCCcCE
Confidence 34699999999999999987622123778889999999998865 54 367777776432 2 1 2578999
Q ss_pred EEecccccccccchHHHHHHHHHhccCCeEEEEEe
Q 039518 296 VHCSRCRVDWHANDGILLKEVDRVLRPNGYFVYSA 330 (617)
Q Consensus 296 V~~s~~l~h~~~d~~~~L~el~RvLrPGG~Liis~ 330 (617)
|++.. ...+...++.++.++|+|||++++..
T Consensus 151 I~~d~----~~~~~~~~l~~~~~~L~pGG~lv~d~ 181 (237)
T 3c3y_A 151 GFVDA----DKPNYIKYHERLMKLVKVGGIVAYDN 181 (237)
T ss_dssp EEECS----CGGGHHHHHHHHHHHEEEEEEEEEEC
T ss_pred EEECC----chHHHHHHHHHHHHhcCCCeEEEEec
Confidence 99652 23456789999999999999999865
No 240
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=98.67 E-value=5.1e-08 Score=104.14 Aligned_cols=123 Identities=12% Similarity=0.042 Sum_probs=86.6
Q ss_pred CCCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHh----CCC-cEEEEecCCCCCC----CCCCeeEEEe
Q 039518 228 GVFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALER----GIG-AMISALSTKQLPY----PSSSFEMVHC 298 (617)
Q Consensus 228 ~g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~er----g~~-~~~~~~d~~~Lpf----~d~sFDlV~~ 298 (617)
++.+|||+|||+|.++..+++. +..+.++|+++.+++.|+++ +.. +.+..+|+..+.. .+++||+|++
T Consensus 209 ~~~~VLDlg~G~G~~~~~la~~---~~~v~~vD~s~~~~~~a~~n~~~n~~~~~~~~~~d~~~~~~~~~~~~~~fD~Ii~ 285 (382)
T 1wxx_A 209 RGERALDVFSYAGGFALHLALG---FREVVAVDSSAEALRRAEENARLNGLGNVRVLEANAFDLLRRLEKEGERFDLVVL 285 (382)
T ss_dssp CEEEEEEETCTTTHHHHHHHHH---EEEEEEEESCHHHHHHHHHHHHHTTCTTEEEEESCHHHHHHHHHHTTCCEEEEEE
T ss_pred CCCeEEEeeeccCHHHHHHHHh---CCEEEEEECCHHHHHHHHHHHHHcCCCCceEEECCHHHHHHHHHhcCCCeeEEEE
Confidence 4567999999999999999886 45788999999999998875 443 7788888655421 2568999998
Q ss_pred cccccc--------cccchHHHHHHHHHhccCCeEEEEEeCCCCCCCCCChhhHH-HHHHHHHHcCce
Q 039518 299 SRCRVD--------WHANDGILLKEVDRVLRPNGYFVYSAPPAYRKDKDYPLIWD-KLVNLTTAMCWK 357 (617)
Q Consensus 299 s~~l~h--------~~~d~~~~L~el~RvLrPGG~Liis~p~~~~~~~~~~~~W~-~le~La~~~gw~ 357 (617)
.--... ...+...++.++.++|+|||.++++....... ...|. .+.+.+...|..
T Consensus 286 dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~----~~~~~~~i~~~~~~~g~~ 349 (382)
T 1wxx_A 286 DPPAFAKGKKDVERAYRAYKEVNLRAIKLLKEGGILATASCSHHMT----EPLFYAMVAEAAQDAHRL 349 (382)
T ss_dssp CCCCSCCSTTSHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCTTSC----HHHHHHHHHHHHHHTTCC
T ss_pred CCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCCCC----HHHHHHHHHHHHHHcCCe
Confidence 532211 11334678999999999999999988643321 11132 345566666643
No 241
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=98.62 E-value=3.6e-08 Score=102.02 Aligned_cols=118 Identities=12% Similarity=0.032 Sum_probs=78.8
Q ss_pred CcccCCCCeEEEECCCC------cHHHHHhccCCCcEEEeeecCCcHHHHHHHHHhCCCcEE-EEecCCCCCCCCCCeeE
Q 039518 223 NLRSAGVFQVLDVGCGV------ASFSAFLLPLDIQTMSFAPKDGHENQIQFALERGIGAMI-SALSTKQLPYPSSSFEM 295 (617)
Q Consensus 223 ~lr~~~g~rVLDIGCGt------G~~a~~La~~gv~~v~v~~iDis~~~lq~A~erg~~~~~-~~~d~~~Lpf~d~sFDl 295 (617)
.+.+.++.+|||+|||+ |. ..++++-.....++++|+++. + .++.+ ..+|+..++++ ++||+
T Consensus 58 ~l~l~~g~~VLDLGcGsg~~~GpGs--~~~a~~~~~~~~V~gvDis~~-v-------~~v~~~i~gD~~~~~~~-~~fD~ 126 (290)
T 2xyq_A 58 TLAVPYNMRVIHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDSDLNDF-V-------SDADSTLIGDCATVHTA-NKWDL 126 (290)
T ss_dssp CCCCCTTCEEEEESCCCTTSBCHHH--HHHHHHSCTTCEEEEEESSCC-B-------CSSSEEEESCGGGCCCS-SCEEE
T ss_pred hcCCCCCCEEEEeCCCCCCCCCcHH--HHHHHHcCCCCEEEEEECCCC-C-------CCCEEEEECccccCCcc-CcccE
Confidence 34567788999999944 76 333332111125777888876 1 24677 88999888765 67999
Q ss_pred EEecccccccc-----------cchHHHHHHHHHhccCCeEEEEEeCCCCCCCCCChhhHHHHHHHHHHcCceEEE
Q 039518 296 VHCSRCRVDWH-----------ANDGILLKEVDRVLRPNGYFVYSAPPAYRKDKDYPLIWDKLVNLTTAMCWKLIA 360 (617)
Q Consensus 296 V~~s~~l~h~~-----------~d~~~~L~el~RvLrPGG~Liis~p~~~~~~~~~~~~W~~le~La~~~gw~~v~ 360 (617)
|+|+.. .++. .....+++++.|+|||||.|++...... . .+++.++++..||..+.
T Consensus 127 Vvsn~~-~~~~g~~~~d~~~~~~l~~~~l~~a~r~LkpGG~~v~~~~~~~----~----~~~l~~~l~~~GF~~v~ 193 (290)
T 2xyq_A 127 IISDMY-DPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITEHS----W----NADLYKLMGHFSWWTAF 193 (290)
T ss_dssp EEECCC-CCC---CCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECSSS----C----CHHHHHHHTTEEEEEEE
T ss_pred EEEcCC-ccccccccccccchHHHHHHHHHHHHHhcCCCcEEEEEEeccC----C----HHHHHHHHHHcCCcEEE
Confidence 998632 2211 1134789999999999999999764221 1 23577778888887654
No 242
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=98.60 E-value=1.1e-07 Score=96.83 Aligned_cols=130 Identities=10% Similarity=0.047 Sum_probs=89.6
Q ss_pred CCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHh----CCCcEEEEecCCCCCCCCCCeeEEEecccccc
Q 039518 229 VFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALER----GIGAMISALSTKQLPYPSSSFEMVHCSRCRVD 304 (617)
Q Consensus 229 g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~er----g~~~~~~~~d~~~Lpf~d~sFDlV~~s~~l~h 304 (617)
..+|||||||+|.++..++.....+ .+.++|+++.++++++++ |++..+.+.|...-+ +.+.||+|+++-++++
T Consensus 133 p~~VLDLGCG~GpLAl~~~~~~p~a-~y~a~DId~~~le~a~~~l~~~g~~~~~~v~D~~~~~-p~~~~DvaL~lkti~~ 210 (281)
T 3lcv_B 133 PNTLRDLACGLNPLAAPWMGLPAET-VYIASDIDARLVGFVDEALTRLNVPHRTNVADLLEDR-LDEPADVTLLLKTLPC 210 (281)
T ss_dssp CSEEEETTCTTGGGCCTTTTCCTTC-EEEEEESBHHHHHHHHHHHHHTTCCEEEEECCTTTSC-CCSCCSEEEETTCHHH
T ss_pred CceeeeeccCccHHHHHHHhhCCCC-EEEEEeCCHHHHHHHHHHHHhcCCCceEEEeeecccC-CCCCcchHHHHHHHHH
Confidence 4579999999999999998875443 788999999999998876 777778887764444 5678999998877766
Q ss_pred cccchHHHHHHHHHhccCCeEEEEEeC-CCCCCCCCChhhHH-HHHHHHHHcCceEEE
Q 039518 305 WHANDGILLKEVDRVLRPNGYFVYSAP-PAYRKDKDYPLIWD-KLVNLTTAMCWKLIA 360 (617)
Q Consensus 305 ~~~d~~~~L~el~RvLrPGG~Liis~p-~~~~~~~~~~~~W~-~le~La~~~gw~~v~ 360 (617)
........+.++.+.|+|+|.++-... ......+.....+. .+++.+...||..-.
T Consensus 211 Le~q~kg~g~~ll~aL~~~~vvVSfp~ksl~Grs~gm~~~Y~~~~e~~~~~~g~~~~~ 268 (281)
T 3lcv_B 211 LETQQRGSGWEVIDIVNSPNIVVTFPTKSLGQRSKGMFQNYSQSFESQARERSCRIQR 268 (281)
T ss_dssp HHHHSTTHHHHHHHHSSCSEEEEEEECC-------CHHHHHHHHHHHHHHHHTCCEEE
T ss_pred hhhhhhHHHHHHHHHhCCCCEEEeccchhhcCCCcchhhHHHHHHHHHHHhcCCceee
Confidence 653323233399999999998775432 11222222222222 278888888985443
No 243
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=98.59 E-value=6.9e-08 Score=99.20 Aligned_cols=95 Identities=16% Similarity=0.088 Sum_probs=70.0
Q ss_pred CCCCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHhC------CCcEEEEecCCCCCCCCCCeeEEEecc
Q 039518 227 AGVFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALERG------IGAMISALSTKQLPYPSSSFEMVHCSR 300 (617)
Q Consensus 227 ~~g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~erg------~~~~~~~~d~~~Lpf~d~sFDlV~~s~ 300 (617)
.++.+|||||||+|.++..|++++. .++++|+++.+++.++++. .++.+..+|+..++++ +||+|+++.
T Consensus 27 ~~~~~VLDiG~G~G~lt~~L~~~~~---~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~D~~~~~~~--~fD~vv~nl 101 (285)
T 1zq9_A 27 RPTDVVLEVGPGTGNMTVKLLEKAK---KVVACELDPRLVAELHKRVQGTPVASKLQVLVGDVLKTDLP--FFDTCVANL 101 (285)
T ss_dssp CTTCEEEEECCTTSTTHHHHHHHSS---EEEEEESCHHHHHHHHHHHTTSTTGGGEEEEESCTTTSCCC--CCSEEEEEC
T ss_pred CCCCEEEEEcCcccHHHHHHHhhCC---EEEEEECCHHHHHHHHHHHHhcCCCCceEEEEcceecccch--hhcEEEEec
Confidence 3566799999999999999998865 6778899999999998762 2578888998887765 799999864
Q ss_pred cccccccchH-HHH--------------HHH--HHhccCCeEEE
Q 039518 301 CRVDWHANDG-ILL--------------KEV--DRVLRPNGYFV 327 (617)
Q Consensus 301 ~l~h~~~d~~-~~L--------------~el--~RvLrPGG~Li 327 (617)
..++..+.. .++ +|+ .++|+|||.++
T Consensus 102 -py~~~~~~~~~~l~~~~~~~~~~~m~qkEva~r~vlkPGg~~y 144 (285)
T 1zq9_A 102 -PYQISSPFVFKLLLHRPFFRCAILMFQREFALRLVAKPGDKLY 144 (285)
T ss_dssp -CGGGHHHHHHHHHHCSSCCSEEEEEEEHHHHHHHHCCTTCTTC
T ss_pred -CcccchHHHHHHHhcCcchhhhhhhhhHHHHHHHhcCCCCccc
Confidence 333332111 122 333 36899999864
No 244
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=98.59 E-value=8.2e-08 Score=96.73 Aligned_cols=97 Identities=11% Similarity=-0.016 Sum_probs=74.4
Q ss_pred CCCCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHh----CCCcEEEEecCCCCCCCCCCeeEEEecccc
Q 039518 227 AGVFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALER----GIGAMISALSTKQLPYPSSSFEMVHCSRCR 302 (617)
Q Consensus 227 ~~g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~er----g~~~~~~~~d~~~Lpf~d~sFDlV~~s~~l 302 (617)
.+..+|||||||+|.++..++ . ...+.+.|+++.++++++++ +.+..+.+.|....+.+. +||+|++.-++
T Consensus 104 ~~p~~VLDlGCG~gpLal~~~-~---~~~y~a~DId~~~i~~ar~~~~~~g~~~~~~v~D~~~~~~~~-~~DvvLllk~l 178 (253)
T 3frh_A 104 ETPRRVLDIACGLNPLALYER-G---IASVWGCDIHQGLGDVITPFAREKDWDFTFALQDVLCAPPAE-AGDLALIFKLL 178 (253)
T ss_dssp CCCSEEEEETCTTTHHHHHHT-T---CSEEEEEESBHHHHHHHHHHHHHTTCEEEEEECCTTTSCCCC-BCSEEEEESCH
T ss_pred CCCCeEEEecCCccHHHHHhc-c---CCeEEEEeCCHHHHHHHHHHHHhcCCCceEEEeecccCCCCC-CcchHHHHHHH
Confidence 356689999999999999887 2 22678889999999999876 677788888887777554 89999988766
Q ss_pred cccccchHHHHHHHHHhccCCeEEEE
Q 039518 303 VDWHANDGILLKEVDRVLRPNGYFVY 328 (617)
Q Consensus 303 ~h~~~d~~~~L~el~RvLrPGG~Lii 328 (617)
++........+.++.+.|+++|.++-
T Consensus 179 h~LE~q~~~~~~~ll~aL~~~~vvVs 204 (253)
T 3frh_A 179 PLLEREQAGSAMALLQSLNTPRMAVS 204 (253)
T ss_dssp HHHHHHSTTHHHHHHHHCBCSEEEEE
T ss_pred HHhhhhchhhHHHHHHHhcCCCEEEE
Confidence 66542223344488889999976654
No 245
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=98.55 E-value=2.4e-07 Score=97.32 Aligned_cols=92 Identities=12% Similarity=0.052 Sum_probs=73.4
Q ss_pred CCCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHh----CC--CcEEEEecCCCCCCCCCCeeEEEeccc
Q 039518 228 GVFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALER----GI--GAMISALSTKQLPYPSSSFEMVHCSRC 301 (617)
Q Consensus 228 ~g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~er----g~--~~~~~~~d~~~Lpf~d~sFDlV~~s~~ 301 (617)
++.+|||+|||+|.++.. ++ + +..+.++|+++.+++.|+++ ++ ++.+..+|+..+. ++||+|++...
T Consensus 195 ~~~~VLDlg~G~G~~~l~-a~-~--~~~V~~vD~s~~ai~~a~~n~~~n~l~~~v~~~~~D~~~~~---~~fD~Vi~dpP 267 (336)
T 2yx1_A 195 LNDVVVDMFAGVGPFSIA-CK-N--AKKIYAIDINPHAIELLKKNIKLNKLEHKIIPILSDVREVD---VKGNRVIMNLP 267 (336)
T ss_dssp TTCEEEETTCTTSHHHHH-TT-T--SSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCC---CCEEEEEECCT
T ss_pred CCCEEEEccCccCHHHHh-cc-C--CCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECChHHhc---CCCcEEEECCc
Confidence 456799999999999999 77 3 23688889999999988875 44 4788888887765 78999997521
Q ss_pred ccccccchHHHHHHHHHhccCCeEEEEEeC
Q 039518 302 RVDWHANDGILLKEVDRVLRPNGYFVYSAP 331 (617)
Q Consensus 302 l~h~~~d~~~~L~el~RvLrPGG~Liis~p 331 (617)
.....++.++.++|+|||.+++...
T Consensus 268 -----~~~~~~l~~~~~~L~~gG~l~~~~~ 292 (336)
T 2yx1_A 268 -----KFAHKFIDKALDIVEEGGVIHYYTI 292 (336)
T ss_dssp -----TTGGGGHHHHHHHEEEEEEEEEEEE
T ss_pred -----HhHHHHHHHHHHHcCCCCEEEEEEe
Confidence 1233789999999999999998753
No 246
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=98.50 E-value=1.7e-07 Score=96.88 Aligned_cols=69 Identities=22% Similarity=0.335 Sum_probs=53.1
Q ss_pred CCCCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHh----C-CCcEEEEecCCCCCCCCCCeeEEEecc
Q 039518 227 AGVFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALER----G-IGAMISALSTKQLPYPSSSFEMVHCSR 300 (617)
Q Consensus 227 ~~g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~er----g-~~~~~~~~d~~~Lpf~d~sFDlV~~s~ 300 (617)
.++.+|||||||+|.++..|++++. .+.++|+++.+++.|+++ + .++.+..+|+..++++ +||+|+++.
T Consensus 41 ~~~~~VLDiG~G~G~lt~~La~~~~---~v~~vDi~~~~~~~a~~~~~~~~~~~v~~~~~D~~~~~~~--~~D~Vv~n~ 114 (299)
T 2h1r_A 41 KSSDIVLEIGCGTGNLTVKLLPLAK---KVITIDIDSRMISEVKKRCLYEGYNNLEVYEGDAIKTVFP--KFDVCTANI 114 (299)
T ss_dssp CTTCEEEEECCTTSTTHHHHTTTSS---EEEEECSCHHHHHHHHHHHHHTTCCCEEC----CCSSCCC--CCSEEEEEC
T ss_pred CCcCEEEEEcCcCcHHHHHHHhcCC---EEEEEECCHHHHHHHHHHHHHcCCCceEEEECchhhCCcc--cCCEEEEcC
Confidence 3556799999999999999998854 678889999999998875 3 2577888888877754 799999864
No 247
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=98.48 E-value=1.7e-06 Score=94.00 Aligned_cols=117 Identities=15% Similarity=0.218 Sum_probs=82.3
Q ss_pred CCCCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHh----CC-CcEEEEecCCC----CCCCCCCeeEEE
Q 039518 227 AGVFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALER----GI-GAMISALSTKQ----LPYPSSSFEMVH 297 (617)
Q Consensus 227 ~~g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~er----g~-~~~~~~~d~~~----Lpf~d~sFDlV~ 297 (617)
.++.+|||+|||+|.++..|++.+. .+.++|+++.+++.|+++ +. ++.+..+|+.+ +++++++||+|+
T Consensus 285 ~~~~~VLDlgcG~G~~~~~la~~~~---~V~gvD~s~~al~~A~~n~~~~~~~~v~f~~~d~~~~l~~~~~~~~~fD~Vv 361 (433)
T 1uwv_A 285 QPEDRVLDLFCGMGNFTLPLATQAA---SVVGVEGVPALVEKGQQNARLNGLQNVTFYHENLEEDVTKQPWAKNGFDKVL 361 (433)
T ss_dssp CTTCEEEEESCTTTTTHHHHHTTSS---EEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCTTSCCSSSGGGTTCCSEEE
T ss_pred CCCCEEEECCCCCCHHHHHHHhhCC---EEEEEeCCHHHHHHHHHHHHHcCCCceEEEECCHHHHhhhhhhhcCCCCEEE
Confidence 3456799999999999999998743 678889999999998865 44 57888888766 445677899999
Q ss_pred ecccccccccchHHHHHHHHHhccCCeEEEEEeCCCCCCCCCChhhHHHHHHHHHHcCceEEE
Q 039518 298 CSRCRVDWHANDGILLKEVDRVLRPNGYFVYSAPPAYRKDKDYPLIWDKLVNLTTAMCWKLIA 360 (617)
Q Consensus 298 ~s~~l~h~~~d~~~~L~el~RvLrPGG~Liis~p~~~~~~~~~~~~W~~le~La~~~gw~~v~ 360 (617)
+.--... ...++..+. .++|++.++++..+ ....+-...+...||++..
T Consensus 362 ~dPPr~g----~~~~~~~l~-~~~p~~ivyvsc~p---------~tlard~~~l~~~Gy~~~~ 410 (433)
T 1uwv_A 362 LDPARAG----AAGVMQQII-KLEPIRIVYVSCNP---------ATLARDSEALLKAGYTIAR 410 (433)
T ss_dssp ECCCTTC----CHHHHHHHH-HHCCSEEEEEESCH---------HHHHHHHHHHHHTTCEEEE
T ss_pred ECCCCcc----HHHHHHHHH-hcCCCeEEEEECCh---------HHHHhhHHHHHHCCcEEEE
Confidence 7632211 224555554 37899999997631 1122323344556888765
No 248
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=98.48 E-value=9.1e-07 Score=96.15 Aligned_cols=96 Identities=20% Similarity=0.241 Sum_probs=72.2
Q ss_pred CCCCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHh----CCCcEEEEecCCCCCCCCCCeeEEEecccc
Q 039518 227 AGVFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALER----GIGAMISALSTKQLPYPSSSFEMVHCSRCR 302 (617)
Q Consensus 227 ~~g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~er----g~~~~~~~~d~~~Lpf~d~sFDlV~~s~~l 302 (617)
.++.+|||+|||+|.++..|++.+. .+.++|+++.+++.|+++ ++.+.+..+|+.++.. + +||+|++....
T Consensus 289 ~~~~~VLDlgcG~G~~sl~la~~~~---~V~gvD~s~~ai~~A~~n~~~ngl~v~~~~~d~~~~~~-~-~fD~Vv~dPPr 363 (425)
T 2jjq_A 289 VEGEKILDMYSGVGTFGIYLAKRGF---NVKGFDSNEFAIEMARRNVEINNVDAEFEVASDREVSV-K-GFDTVIVDPPR 363 (425)
T ss_dssp CCSSEEEEETCTTTHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHHHHTCCEEEEECCTTTCCC-T-TCSEEEECCCT
T ss_pred CCCCEEEEeeccchHHHHHHHHcCC---EEEEEECCHHHHHHHHHHHHHcCCcEEEEECChHHcCc-c-CCCEEEEcCCc
Confidence 3556799999999999999998754 678889999999988765 5557888888877642 2 89999975422
Q ss_pred cccccchHHHHHHHHHhccCCeEEEEEeC
Q 039518 303 VDWHANDGILLKEVDRVLRPNGYFVYSAP 331 (617)
Q Consensus 303 ~h~~~d~~~~L~el~RvLrPGG~Liis~p 331 (617)
.. ....++..+ +.|+|||.++++..
T Consensus 364 ~g---~~~~~~~~l-~~l~p~givyvsc~ 388 (425)
T 2jjq_A 364 AG---LHPRLVKRL-NREKPGVIVYVSCN 388 (425)
T ss_dssp TC---SCHHHHHHH-HHHCCSEEEEEESC
T ss_pred cc---hHHHHHHHH-HhcCCCcEEEEECC
Confidence 11 123455555 45999999999863
No 249
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=98.47 E-value=1.1e-07 Score=101.74 Aligned_cols=120 Identities=14% Similarity=0.132 Sum_probs=83.6
Q ss_pred CCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHhCCCcEEEEecCCCCCCCCCCeeEEEecccccc----
Q 039518 229 VFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALERGIGAMISALSTKQLPYPSSSFEMVHCSRCRVD---- 304 (617)
Q Consensus 229 g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~erg~~~~~~~~d~~~Lpf~d~sFDlV~~s~~l~h---- 304 (617)
+.+|||+|||+|.++..++++......+.++|+++.+++.| ..+.+..+|+...+ +++.||+|+++--...
T Consensus 40 ~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~~a----~~~~~~~~D~~~~~-~~~~fD~Ii~NPPy~~~~~~ 114 (421)
T 2ih2_A 40 GGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLP----PWAEGILADFLLWE-PGEAFDLILGNPPYGIVGEA 114 (421)
T ss_dssp TCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCCCC----TTEEEEESCGGGCC-CSSCEEEEEECCCCCCBSCT
T ss_pred CCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHHhC----CCCcEEeCChhhcC-ccCCCCEEEECcCccCcccc
Confidence 45799999999999999987521113688889999988777 35778888876654 3568999999622211
Q ss_pred ------cccc------------------hHHHHHHHHHhccCCeEEEEEeCCCCCCCCCChhhHHHHHHHHHHcCce
Q 039518 305 ------WHAN------------------DGILLKEVDRVLRPNGYFVYSAPPAYRKDKDYPLIWDKLVNLTTAMCWK 357 (617)
Q Consensus 305 ------~~~d------------------~~~~L~el~RvLrPGG~Liis~p~~~~~~~~~~~~W~~le~La~~~gw~ 357 (617)
..++ ...++..+.++|+|||.+++..|....... . .+.+.+.+.+.++.
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~~G~~~~i~p~~~l~~~-~---~~~lr~~l~~~~~~ 187 (421)
T 2ih2_A 115 SKYPIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLLKPGGVLVFVVPATWLVLE-D---FALLREFLAREGKT 187 (421)
T ss_dssp TTCSBCCCHHHHHHHHHHCTTCCTTCCHHHHHHHHHHHHEEEEEEEEEEEEGGGGTCG-G---GHHHHHHHHHHSEE
T ss_pred cccccccCHHHHHHHHHhhhcccCCccHHHHHHHHHHHHhCCCCEEEEEEChHHhcCc-c---HHHHHHHHHhcCCe
Confidence 1111 125688999999999999999875322211 1 34577777777773
No 250
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=98.41 E-value=4.8e-07 Score=90.72 Aligned_cols=69 Identities=10% Similarity=0.115 Sum_probs=56.1
Q ss_pred CCCCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHhC---CCcEEEEecCCCCCCCC-CCeeEEEec
Q 039518 227 AGVFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALERG---IGAMISALSTKQLPYPS-SSFEMVHCS 299 (617)
Q Consensus 227 ~~g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~erg---~~~~~~~~d~~~Lpf~d-~sFDlV~~s 299 (617)
.++.+|||||||+|.++..|++++. .++++|+++.+++.++++. .++.+..+|+.++++++ ..|+ |+++
T Consensus 29 ~~~~~VLDiG~G~G~lt~~l~~~~~---~v~~vD~~~~~~~~a~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-vv~n 101 (244)
T 1qam_A 29 NEHDNIFEIGSGKGHFTLELVQRCN---FVTAIEIDHKLCKTTENKLVDHDNFQVLNKDILQFKFPKNQSYK-IFGN 101 (244)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHSS---EEEEECSCHHHHHHHHHHTTTCCSEEEECCCGGGCCCCSSCCCE-EEEE
T ss_pred CCCCEEEEEeCCchHHHHHHHHcCC---eEEEEECCHHHHHHHHHhhccCCCeEEEEChHHhCCcccCCCeE-EEEe
Confidence 4567899999999999999998873 6788899999999998874 35788899999988874 4564 5544
No 251
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=98.39 E-value=1.2e-08 Score=101.98 Aligned_cols=99 Identities=11% Similarity=0.107 Sum_probs=72.1
Q ss_pred CCCCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHhC---CCcEEEEecCCCCCCCC-CCeeEEEecccc
Q 039518 227 AGVFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALERG---IGAMISALSTKQLPYPS-SSFEMVHCSRCR 302 (617)
Q Consensus 227 ~~g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~erg---~~~~~~~~d~~~Lpf~d-~sFDlV~~s~~l 302 (617)
.++.+|||+|||+|.++..|++++. .++++|+++.+++.|+++. .++.+..+|+.++++++ ++| .|+++...
T Consensus 28 ~~~~~VLDiG~G~G~~~~~l~~~~~---~v~~id~~~~~~~~a~~~~~~~~~v~~~~~D~~~~~~~~~~~f-~vv~n~Py 103 (245)
T 1yub_A 28 KETDTVYEIGTGKGHLTTKLAKISK---QVTSIELDSHLFNLSSEKLKLNTRVTLIHQDILQFQFPNKQRY-KIVGNIPY 103 (245)
T ss_dssp CSSEEEEECSCCCSSCSHHHHHHSS---EEEESSSSCSSSSSSSCTTTTCSEEEECCSCCTTTTCCCSSEE-EEEEECCS
T ss_pred CCCCEEEEEeCCCCHHHHHHHHhCC---eEEEEECCHHHHHHHHHHhccCCceEEEECChhhcCcccCCCc-EEEEeCCc
Confidence 3566799999999999999998863 6888999999988887653 35778888998888774 689 66665211
Q ss_pred -----------cccccchHHHH----HHHHHhccCCeEEEEEe
Q 039518 303 -----------VDWHANDGILL----KEVDRVLRPNGYFVYSA 330 (617)
Q Consensus 303 -----------~h~~~d~~~~L----~el~RvLrPGG~Liis~ 330 (617)
.|+ .+....+ +.+.|+|+|||.+.+..
T Consensus 104 ~~~~~~~~~~~~~~-~~~~~~lm~q~e~a~rll~~~G~l~v~~ 145 (245)
T 1yub_A 104 HLSTQIIKKVVFES-RASDIYLIVEEGFYKRTLDIHRTLGLLL 145 (245)
T ss_dssp SSCHHHHHHHHHHC-CCEEEEEEEESSHHHHHHCGGGSHHHHT
T ss_pred cccHHHHHHHHhCC-CCCeEEEEeeHHHHHHHhCCCCchhhhh
Confidence 111 1222334 66889999999887754
No 252
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=98.34 E-value=1.1e-05 Score=86.48 Aligned_cols=281 Identities=12% Similarity=0.162 Sum_probs=142.5
Q ss_pred CeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHhCCCcEEEEecCCCCCCCCCCeeEEEeccccccccc--
Q 039518 230 FQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALERGIGAMISALSTKQLPYPSSSFEMVHCSRCRVDWHA-- 307 (617)
Q Consensus 230 ~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~erg~~~~~~~~d~~~Lpf~d~sFDlV~~s~~l~h~~~-- 307 (617)
.+||.++-+.|..+..+... ..+..+ .-+....+..+.+|..... . .....+...||+|+. .++.
T Consensus 47 ~~~l~~n~~~g~~~~~~~~~-~~~~~~---~~~~~~~~~l~~~~~~~~~--~--~~~~~~~~~~d~v~~-----~~Pk~k 113 (381)
T 3dmg_A 47 ERALDLNPGVGWGSLPLEGR-MAVERL---ETSRAAFRCLTASGLQARL--A--LPWEAAAGAYDLVVL-----ALPAGR 113 (381)
T ss_dssp SEEEESSCTTSTTTGGGBTT-BEEEEE---ECBHHHHHHHHHTTCCCEE--C--CGGGSCTTCEEEEEE-----ECCGGG
T ss_pred CcEEEecCCCCccccccCCC-CceEEE---eCcHHHHHHHHHcCCCccc--c--CCccCCcCCCCEEEE-----ECCcch
Confidence 36999999999877777633 222222 2244443445556776532 1 112224567999973 2332
Q ss_pred ---chHHHHHHHHHhccCCeEEEEEeCCCCCCCCCChhhHHHHHHHHH-HcCceEEEEeeeeEEEeeccchhhhhhcccC
Q 039518 308 ---NDGILLKEVDRVLRPNGYFVYSAPPAYRKDKDYPLIWDKLVNLTT-AMCWKLIARKIQTAIWIKEENQSCLLHNADL 383 (617)
Q Consensus 308 ---d~~~~L~el~RvLrPGG~Liis~p~~~~~~~~~~~~W~~le~La~-~~gw~~v~~~~~~~IwqKp~~~~C~~~r~~~ 383 (617)
.....|.++.+.|+|||.+++.+... .+ .+.+...++ ..++......+. ...|.......
T Consensus 114 ~~~~~~~~l~~~~~~l~~g~~i~~~g~~~------~g--~~~~~~~~~~~~~~~~~~~~~~--------~~r~~~~~~~~ 177 (381)
T 3dmg_A 114 GTAYVQASLVAAARALRMGGRLYLAGDKN------KG--FERYFKEARALLGYGVVVRREG--------PYRVALLEKEK 177 (381)
T ss_dssp CHHHHHHHHHHHHHHEEEEEEEEEEEEGG------GT--HHHHHHHHHHHHSCEEEEEEET--------TEEEEEEECCS
T ss_pred hHHHHHHHHHHHHHhCCCCCEEEEEEccH------HH--HHHHHHHHHhhhcccccccccc--------CcEEEEEEccC
Confidence 23568999999999999999987421 12 344444443 456654443211 11222111100
Q ss_pred ccCCccccCCCCCCcccccccccccccccccCCCCCCCCCCccccCCcccccccc-CccccccchhhHHHHHHHHHHhcc
Q 039518 384 KLIDVCDAVDEFKPSWNTPLGNCVQISSAQTNSQKLPPRPERLSVYSESLSRIGI-TQEEFTTDTSFWQDQVRHYWQLMN 462 (617)
Q Consensus 384 ~~p~lC~~~~d~~~~WY~~L~~c~~~~~~~~~~~~~~~wp~rl~~~p~~~~~~~~-~~~~f~~d~~~w~~~v~~y~~~~~ 462 (617)
...+....| ...+..+. +.. -++.. .+|+ +.......++...+.+..+..
T Consensus 178 -------~~p~~~~~w-~~~~~~~~-------g~~-----~~~~~------~pgvFs~~~~d~~t~~ll~~l~~~l~--- 228 (381)
T 3dmg_A 178 -------EAPPLPSLW-RAFSARIL-------GAE-----YTFHH------LPGVFSAGKVDPASLLLLEALQERLG--- 228 (381)
T ss_dssp -------CCCCCCCCC-EEEEEEET-------TEE-----EEEEE------CTTCTTTTSCCHHHHHHHHHHHHHHC---
T ss_pred -------CCCCCcccc-ceeeEEec-------Cce-----EEEEe------CCCceeCCCCCHHHHHHHHHHHHhhc---
Confidence 001111223 22111110 000 01111 1121 222223344555554444331
Q ss_pred CCCCCeeeEEeccccccchhhhccCCCeEEEEeccCCCC-chhHHHHh----hcc-cccc-cccCCCCCCCCCccchhhc
Q 039518 463 VNETEIRNAMDMNAYCGGFAVALNSLPVWVMNIVPISMK-NTLSAIYN----RGI-LGAF-HDWCEPFSTYPRTYDLLHA 535 (617)
Q Consensus 463 ~~~~~~Rn~mDm~~~~g~faa~l~~~~v~vmnv~p~~~~-~~l~~~~~----RGl-ig~~-~~~~~~f~typrtyDl~H~ 535 (617)
.....-.+|||+|||.|.++.+|..... .|.-.|.. ..+..+-+ .|+ +-++ .|..+. ..=..+||+|-+
T Consensus 229 ~~~~~~~~VLDlGcG~G~~~~~la~~g~---~V~gvDis~~al~~A~~n~~~~~~~v~~~~~D~~~~-~~~~~~fD~Ii~ 304 (381)
T 3dmg_A 229 PEGVRGRQVLDLGAGYGALTLPLARMGA---EVVGVEDDLASVLSLQKGLEANALKAQALHSDVDEA-LTEEARFDIIVT 304 (381)
T ss_dssp TTTTTTCEEEEETCTTSTTHHHHHHTTC---EEEEEESBHHHHHHHHHHHHHTTCCCEEEECSTTTT-SCTTCCEEEEEE
T ss_pred ccCCCCCEEEEEeeeCCHHHHHHHHcCC---EEEEEECCHHHHHHHHHHHHHcCCCeEEEEcchhhc-cccCCCeEEEEE
Confidence 0111225899999999999999977654 33334443 44433332 232 2222 222222 111279999999
Q ss_pred cccccccccCCCCCChhhHHhhhhhcccCCceEEEecC
Q 039518 536 NHLFSHYKNRGEVCSLEDIMLEMDLIIRPQGFIIIRDE 573 (617)
Q Consensus 536 ~~~~s~~~~~~~~c~~~~~l~e~dRilRP~G~~i~~d~ 573 (617)
+..|..- .....-....++-++-|+|+|||.+++.-+
T Consensus 305 npp~~~~-~~~~~~~~~~~l~~~~~~LkpGG~l~iv~n 341 (381)
T 3dmg_A 305 NPPFHVG-GAVILDVAQAFVNVAAARLRPGGVFFLVSN 341 (381)
T ss_dssp CCCCCTT-CSSCCHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred CCchhhc-ccccHHHHHHHHHHHHHhcCcCcEEEEEEc
Confidence 8777631 001112235788999999999999999743
No 253
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=98.34 E-value=5.2e-07 Score=85.44 Aligned_cols=117 Identities=13% Similarity=0.222 Sum_probs=75.3
Q ss_pred eeEEeccccccchhhhccCCCeEEEEeccCCCC-chhHHHHh----hcc--cc-cccccCCCCCCCCCccchhhcccccc
Q 039518 469 RNAMDMNAYCGGFAVALNSLPVWVMNIVPISMK-NTLSAIYN----RGI--LG-AFHDWCEPFSTYPRTYDLLHANHLFS 540 (617)
Q Consensus 469 Rn~mDm~~~~g~faa~l~~~~v~vmnv~p~~~~-~~l~~~~~----RGl--ig-~~~~~~~~f~typrtyDl~H~~~~~s 540 (617)
.+|||+|||.|.++..|..... +|+-.|.. ..+..+-+ .|+ +- +..|..+ ++. +.+||+|.+..++.
T Consensus 34 ~~vLdiG~G~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~-~~~-~~~~D~v~~~~~l~ 108 (199)
T 2xvm_A 34 GKTLDLGCGNGRNSLYLAANGY---DVDAWDKNAMSIANVERIKSIENLDNLHTRVVDLNN-LTF-DRQYDFILSTVVLM 108 (199)
T ss_dssp CEEEEETCTTSHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHHHHTCTTEEEEECCGGG-CCC-CCCEEEEEEESCGG
T ss_pred CeEEEEcCCCCHHHHHHHHCCC---eEEEEECCHHHHHHHHHHHHhCCCCCcEEEEcchhh-CCC-CCCceEEEEcchhh
Confidence 4899999999999999977654 33333333 33444333 333 11 2223322 333 78999999998887
Q ss_pred ccccCCCCCChhhHHhhhhhcccCCceEEEecC--------------hHHHHHHHhhhhcCCceEEEeec
Q 039518 541 HYKNRGEVCSLEDIMLEMDLIIRPQGFIIIRDE--------------KSLITRIRDLAPKFLWDVELHSL 596 (617)
Q Consensus 541 ~~~~~~~~c~~~~~l~e~dRilRP~G~~i~~d~--------------~~~~~~~~~~~~~~~W~~~~~~~ 596 (617)
+. ..=....+|-++-|+|+|||.+++-+. .-..++++++... |++.....
T Consensus 109 ~~----~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--f~~~~~~~ 172 (199)
T 2xvm_A 109 FL----EAKTIPGLIANMQRCTKPGGYNLIVAAMDTADYPCTVGFPFAFKEGELRRYYEG--WERVKYNE 172 (199)
T ss_dssp GS----CGGGHHHHHHHHHHTEEEEEEEEEEEEBCCSSSCCCSCCSCCBCTTHHHHHTTT--SEEEEEEC
T ss_pred hC----CHHHHHHHHHHHHHhcCCCeEEEEEEeeccCCcCCCCCCCCccCHHHHHHHhcC--CeEEEecc
Confidence 54 222456899999999999999877421 0123566777776 88766543
No 254
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=98.26 E-value=1.5e-06 Score=83.76 Aligned_cols=134 Identities=12% Similarity=0.119 Sum_probs=89.4
Q ss_pred eeEEeccccccchhhhccCCCeEEEEeccCCCC-chhHHHHhhcccccccccCCCC---CCCC-Cccchhhccccccccc
Q 039518 469 RNAMDMNAYCGGFAVALNSLPVWVMNIVPISMK-NTLSAIYNRGILGAFHDWCEPF---STYP-RTYDLLHANHLFSHYK 543 (617)
Q Consensus 469 Rn~mDm~~~~g~faa~l~~~~v~vmnv~p~~~~-~~l~~~~~RGlig~~~~~~~~f---~typ-rtyDl~H~~~~~s~~~ 543 (617)
.+|||+|||.|.++.+|.....- |+-.|-. ..+..+-+++.+...+.-.+.+ +..+ .+||+|.+..++. .
T Consensus 54 ~~vLdiG~G~G~~~~~l~~~~~~---v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~fD~v~~~~~l~-~- 128 (227)
T 3e8s_A 54 ERVLDLGCGEGWLLRALADRGIE---AVGVDGDRTLVDAARAAGAGEVHLASYAQLAEAKVPVGKDYDLICANFALL-H- 128 (227)
T ss_dssp SEEEEETCTTCHHHHHHHTTTCE---EEEEESCHHHHHHHHHTCSSCEEECCHHHHHTTCSCCCCCEEEEEEESCCC-S-
T ss_pred CEEEEeCCCCCHHHHHHHHCCCE---EEEEcCCHHHHHHHHHhcccccchhhHHhhcccccccCCCccEEEECchhh-h-
Confidence 78999999999999999887653 3344444 6777777776433322111111 2223 5699999887776 2
Q ss_pred cCCCCCChhhHHhhhhhcccCCceEEEecCh--------------------------------HHHHHHHhhhhcCCceE
Q 039518 544 NRGEVCSLEDIMLEMDLIIRPQGFIIIRDEK--------------------------------SLITRIRDLAPKFLWDV 591 (617)
Q Consensus 544 ~~~~~c~~~~~l~e~dRilRP~G~~i~~d~~--------------------------------~~~~~~~~~~~~~~W~~ 591 (617)
-....+|-|+-|+|+|||++++.+.. ...++++++++.--+++
T Consensus 129 -----~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~ 203 (227)
T 3e8s_A 129 -----QDIIELLSAMRTLLVPGGALVIQTLHPWSVADGDYQDGWREESFAGFAGDWQPMPWYFRTLASWLNALDMAGLRL 203 (227)
T ss_dssp -----SCCHHHHHHHHHTEEEEEEEEEEECCTTTTCTTCCSCEEEEECCTTSSSCCCCEEEEECCHHHHHHHHHHTTEEE
T ss_pred -----hhHHHHHHHHHHHhCCCeEEEEEecCccccCccccccccchhhhhccccCcccceEEEecHHHHHHHHHHcCCeE
Confidence 34568999999999999999997420 14578888888888887
Q ss_pred EEeeccccCC---CceeEEEEEec
Q 039518 592 ELHSLENREK---KMESVLICRKK 612 (617)
Q Consensus 592 ~~~~~e~~~~---~~~~~l~~~k~ 612 (617)
........+. ...-+++++|+
T Consensus 204 ~~~~~~~~~~~~~~~~~~~va~k~ 227 (227)
T 3e8s_A 204 VSLQEPQHPQSAVPQSLLMVAERH 227 (227)
T ss_dssp EEEECCCCTTCSSCSCEEEEEEEC
T ss_pred EEEecCCCCCCCCceeEEEEeecC
Confidence 6554321111 12456777764
No 255
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=98.25 E-value=9.9e-07 Score=93.76 Aligned_cols=102 Identities=13% Similarity=0.030 Sum_probs=74.1
Q ss_pred CCCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHhCC-------------CcEEEEecCCCCCC----CC
Q 039518 228 GVFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALERGI-------------GAMISALSTKQLPY----PS 290 (617)
Q Consensus 228 ~g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~erg~-------------~~~~~~~d~~~Lpf----~d 290 (617)
.+.+|||||||+|.++..+++.+. ..++.+|+++.+++.|+++.. .+.+..+|+...-- .+
T Consensus 188 ~pkrVL~IGgG~G~~arellk~~~--~~Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~~~L~~~~~~~ 265 (364)
T 2qfm_A 188 TGKDVLILGGGDGGILCEIVKLKP--KMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEG 265 (364)
T ss_dssp TTCEEEEEECTTCHHHHHHHTTCC--SEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHT
T ss_pred CCCEEEEEECChhHHHHHHHHCCC--CEEEEEECCHHHHHHHHHHHHHhccccccccCCCcEEEEECcHHHHHHhhhccC
Confidence 567899999999999999998875 378889999999999998732 36777777544321 35
Q ss_pred CCeeEEEeccccccccc-----chHHHHHHH----HHhccCCeEEEEEeC
Q 039518 291 SSFEMVHCSRCRVDWHA-----NDGILLKEV----DRVLRPNGYFVYSAP 331 (617)
Q Consensus 291 ~sFDlV~~s~~l~h~~~-----d~~~~L~el----~RvLrPGG~Liis~p 331 (617)
++||+|++-..-.+... ....+++.+ .++|+|||.+++...
T Consensus 266 ~~fDvII~D~~d~P~~~~p~~L~t~eFy~~~~~~~~~~L~pgGilv~qs~ 315 (364)
T 2qfm_A 266 REFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQGN 315 (364)
T ss_dssp CCEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred CCceEEEECCCCcccCcCchhhhHHHHHHHHHHHHHhhCCCCcEEEEEcC
Confidence 78999997532112111 124555665 899999999998753
No 256
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=98.24 E-value=8.9e-07 Score=88.40 Aligned_cols=113 Identities=12% Similarity=0.187 Sum_probs=73.4
Q ss_pred hHHHHHHHHHHhcc--CCCCCeeeEEeccccccchhhhccCCCeEEEEeccCCCC-chhHHHHhhc--ccccccccCCCC
Q 039518 449 FWQDQVRHYWQLMN--VNETEIRNAMDMNAYCGGFAVALNSLPVWVMNIVPISMK-NTLSAIYNRG--ILGAFHDWCEPF 523 (617)
Q Consensus 449 ~w~~~v~~y~~~~~--~~~~~~Rn~mDm~~~~g~faa~l~~~~v~vmnv~p~~~~-~~l~~~~~RG--lig~~~~~~~~f 523 (617)
.|...+....+.+. +.. -.+|||+|||.|.++..|..... +|+-.|-. ..+..+-++- +--+..|..+ +
T Consensus 32 ~~~~~~~~~~~~l~~~~~~--~~~vLDiGcG~G~~~~~l~~~~~---~v~gvD~s~~~~~~a~~~~~~~~~~~~d~~~-~ 105 (263)
T 3pfg_A 32 DYHREAADLAALVRRHSPK--AASLLDVACGTGMHLRHLADSFG---TVEGLELSADMLAIARRRNPDAVLHHGDMRD-F 105 (263)
T ss_dssp CHHHHHHHHHHHHHHHCTT--CCEEEEETCTTSHHHHHHTTTSS---EEEEEESCHHHHHHHHHHCTTSEEEECCTTT-C
T ss_pred CHHHHHHHHHHHHHhhCCC--CCcEEEeCCcCCHHHHHHHHcCC---eEEEEECCHHHHHHHHhhCCCCEEEECChHH-C
Confidence 34444444444333 333 36899999999999999988753 34444554 6666666652 2212223322 3
Q ss_pred CCCCCccchhhccc-cccccccCCCCCChhhHHhhhhhcccCCceEEEe
Q 039518 524 STYPRTYDLLHANH-LFSHYKNRGEVCSLEDIMLEMDLIIRPQGFIIIR 571 (617)
Q Consensus 524 ~typrtyDl~H~~~-~~s~~~~~~~~c~~~~~l~e~dRilRP~G~~i~~ 571 (617)
+. +.+||+|.+.. +|.+. .+.-....+|-++-|+|+|||.+++.
T Consensus 106 ~~-~~~fD~v~~~~~~l~~~---~~~~~~~~~l~~~~~~L~pgG~l~i~ 150 (263)
T 3pfg_A 106 SL-GRRFSAVTCMFSSIGHL---AGQAELDAALERFAAHVLPDGVVVVE 150 (263)
T ss_dssp CC-SCCEEEEEECTTGGGGS---CHHHHHHHHHHHHHHTEEEEEEEEEC
T ss_pred Cc-cCCcCEEEEcCchhhhc---CCHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 33 78999999887 77754 22234557899999999999999995
No 257
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=98.24 E-value=9e-07 Score=96.40 Aligned_cols=117 Identities=15% Similarity=0.112 Sum_probs=82.7
Q ss_pred HHHHHHHhhhhhccCCcccCCCCeEEEECCCCcHHHHHhccCC------------CcEEEeeecCCcHHHHHHHHHh---
Q 039518 208 EYIQRLGNMMTNETGNLRSAGVFQVLDVGCGVASFSAFLLPLD------------IQTMSFAPKDGHENQIQFALER--- 272 (617)
Q Consensus 208 ~Y~~~L~~~L~~~~~~lr~~~g~rVLDIGCGtG~~a~~La~~g------------v~~v~v~~iDis~~~lq~A~er--- 272 (617)
...+.+.+++.. .++.+|||.|||+|.++..+++.- .....+.++|+++.+++.|+.+
T Consensus 158 ~v~~~mv~~l~~-------~~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~nl~l 230 (445)
T 2okc_A 158 PLIQAMVDCINP-------QMGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNLYL 230 (445)
T ss_dssp HHHHHHHHHHCC-------CTTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCC-------CCCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHHHHH
Confidence 344555555522 345579999999999998876531 0123578899999999988764
Q ss_pred -CC---CcEEEEecCCCCCCCCCCeeEEEeccccccccc-c---------------hHHHHHHHHHhccCCeEEEEEeCC
Q 039518 273 -GI---GAMISALSTKQLPYPSSSFEMVHCSRCRVDWHA-N---------------DGILLKEVDRVLRPNGYFVYSAPP 332 (617)
Q Consensus 273 -g~---~~~~~~~d~~~Lpf~d~sFDlV~~s~~l~h~~~-d---------------~~~~L~el~RvLrPGG~Liis~p~ 332 (617)
|. ...+..+|+...+.. ..||+|+++-.+.+... + ...++..+.++|+|||+++++.|.
T Consensus 231 ~g~~~~~~~i~~gD~l~~~~~-~~fD~Iv~NPPf~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~gG~~a~V~p~ 309 (445)
T 2okc_A 231 HGIGTDRSPIVCEDSLEKEPS-TLVDVILANPPFGTRPAGSVDINRPDFYVETKNNQLNFLQHMMLMLKTGGRAAVVLPD 309 (445)
T ss_dssp TTCCSSCCSEEECCTTTSCCS-SCEEEEEECCCSSCCCTTCCCCCCTTSSSCCSCHHHHHHHHHHHHEEEEEEEEEEEEH
T ss_pred hCCCcCCCCEeeCCCCCCccc-CCcCEEEECCCCCCcccccchhhHhhcCCCCcchHHHHHHHHHHHhccCCEEEEEECC
Confidence 55 567888887666543 48999999854433211 1 136899999999999999998873
No 258
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=98.23 E-value=5.4e-06 Score=80.00 Aligned_cols=149 Identities=13% Similarity=0.149 Sum_probs=95.1
Q ss_pred ccccccchhhHHHHHHHHHH------------hcc-C-CCCCeeeEEeccccccchhhhccCCCeEEEEeccCCCCchhH
Q 039518 440 QEEFTTDTSFWQDQVRHYWQ------------LMN-V-NETEIRNAMDMNAYCGGFAVALNSLPVWVMNIVPISMKNTLS 505 (617)
Q Consensus 440 ~~~f~~d~~~w~~~v~~y~~------------~~~-~-~~~~~Rn~mDm~~~~g~faa~l~~~~v~vmnv~p~~~~~~l~ 505 (617)
.+.|..+.+.|......|.. ++. + ....-.+|||+|||.|.++..|. ..|..+-+.|. .+.
T Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~vLDiG~G~G~~~~~l~-~~v~~~D~s~~----~~~ 100 (215)
T 2zfu_A 26 QRLFQEDPEAFLLYHRGFQSQVKKWPLQPVDRIARDLRQRPASLVVADFGCGDCRLASSIR-NPVHCFDLASL----DPR 100 (215)
T ss_dssp HHHHHHCHHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHTSCTTSCEEEETCTTCHHHHHCC-SCEEEEESSCS----STT
T ss_pred HHHHHHhHHHHHHHHHHHHhhhcccchhHHHHHHHHHhccCCCCeEEEECCcCCHHHHHhh-ccEEEEeCCCC----Cce
Confidence 34567777777766555543 121 1 11223579999999999998884 45555554444 110
Q ss_pred HHHhhcccccccccCCCCCCCCCccchhhccccccccccCCCCCChhhHHhhhhhcccCCceEEEecChH---HHHHHHh
Q 039518 506 AIYNRGILGAFHDWCEPFSTYPRTYDLLHANHLFSHYKNRGEVCSLEDIMLEMDLIIRPQGFIIIRDEKS---LITRIRD 582 (617)
Q Consensus 506 ~~~~RGlig~~~~~~~~f~typrtyDl~H~~~~~s~~~~~~~~c~~~~~l~e~dRilRP~G~~i~~d~~~---~~~~~~~ 582 (617)
+ +..|.. .++.-+.+||+|.+..++. + -....+|-|+-|+|+|||.+++.+... ..+++.+
T Consensus 101 --~------~~~d~~-~~~~~~~~fD~v~~~~~l~-~------~~~~~~l~~~~~~L~~gG~l~i~~~~~~~~~~~~~~~ 164 (215)
T 2zfu_A 101 --V------TVCDMA-QVPLEDESVDVAVFCLSLM-G------TNIRDFLEEANRVLKPGGLLKVAEVSSRFEDVRTFLR 164 (215)
T ss_dssp --E------EESCTT-SCSCCTTCEEEEEEESCCC-S------SCHHHHHHHHHHHEEEEEEEEEEECGGGCSCHHHHHH
T ss_pred --E------EEeccc-cCCCCCCCEeEEEEehhcc-c------cCHHHHHHHHHHhCCCCeEEEEEEcCCCCCCHHHHHH
Confidence 0 111211 1222247999999887773 2 245789999999999999999986543 4567788
Q ss_pred hhhcCCceEEEeeccccCCCceeEEEEEec
Q 039518 583 LAPKFLWDVELHSLENREKKMESVLICRKK 612 (617)
Q Consensus 583 ~~~~~~W~~~~~~~e~~~~~~~~~l~~~k~ 612 (617)
+++..-++....+...+ .-.+++++|.
T Consensus 165 ~l~~~Gf~~~~~~~~~~---~~~~~~~~k~ 191 (215)
T 2zfu_A 165 AVTKLGFKIVSKDLTNS---HFFLFDFQKT 191 (215)
T ss_dssp HHHHTTEEEEEEECCST---TCEEEEEEEC
T ss_pred HHHHCCCEEEEEecCCC---eEEEEEEEec
Confidence 88888888766543322 2467888875
No 259
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=98.22 E-value=8.6e-07 Score=91.90 Aligned_cols=83 Identities=11% Similarity=0.011 Sum_probs=66.0
Q ss_pred HHHHHHHhhhhhccCCcccCCCCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHhC---CCcEEEEecCC
Q 039518 208 EYIQRLGNMMTNETGNLRSAGVFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALERG---IGAMISALSTK 284 (617)
Q Consensus 208 ~Y~~~L~~~L~~~~~~lr~~~g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~erg---~~~~~~~~d~~ 284 (617)
...+.+.+.+. +.++.+|||||||+|.++..|++++. .++++|+++.+++.++++. .++.+..+|+.
T Consensus 37 ~i~~~Iv~~l~-------~~~~~~VLEIG~G~G~lT~~La~~~~---~V~aVEid~~li~~a~~~~~~~~~v~vi~gD~l 106 (295)
T 3gru_A 37 NFVNKAVESAN-------LTKDDVVLEIGLGKGILTEELAKNAK---KVYVIEIDKSLEPYANKLKELYNNIEIIWGDAL 106 (295)
T ss_dssp HHHHHHHHHTT-------CCTTCEEEEECCTTSHHHHHHHHHSS---EEEEEESCGGGHHHHHHHHHHCSSEEEEESCTT
T ss_pred HHHHHHHHhcC-------CCCcCEEEEECCCchHHHHHHHhcCC---EEEEEECCHHHHHHHHHHhccCCCeEEEECchh
Confidence 44555555542 23566799999999999999998754 6778899999999988762 56889999999
Q ss_pred CCCCCCCCeeEEEecc
Q 039518 285 QLPYPSSSFEMVHCSR 300 (617)
Q Consensus 285 ~Lpf~d~sFDlV~~s~ 300 (617)
++++++.+||.|+++.
T Consensus 107 ~~~~~~~~fD~Iv~Nl 122 (295)
T 3gru_A 107 KVDLNKLDFNKVVANL 122 (295)
T ss_dssp TSCGGGSCCSEEEEEC
T ss_pred hCCcccCCccEEEEeC
Confidence 9998888899999774
No 260
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=98.21 E-value=2.5e-06 Score=82.65 Aligned_cols=160 Identities=12% Similarity=0.091 Sum_probs=94.6
Q ss_pred cccchhhHHHHHHHHHHhccCCCCCeeeEEeccccccchhhhccCCC--eEEEEeccCCCC-chhHHHHhh---------
Q 039518 443 FTTDTSFWQDQVRHYWQLMNVNETEIRNAMDMNAYCGGFAVALNSLP--VWVMNIVPISMK-NTLSAIYNR--------- 510 (617)
Q Consensus 443 f~~d~~~w~~~v~~y~~~~~~~~~~~Rn~mDm~~~~g~faa~l~~~~--v~vmnv~p~~~~-~~l~~~~~R--------- 510 (617)
|+.-......+++...+.+....+ .+|||+|||.|.++.+|.+.. .-| +-.|-. ..+..+-++
T Consensus 7 ~~~~~~~~~~~~~~l~~~l~~~~~--~~vLDiGcG~G~~~~~l~~~~~~~~v---~gvD~s~~~~~~a~~~~~~~~~~~~ 81 (219)
T 3jwg_A 7 TEKKLNLNQQRLGTVVAVLKSVNA--KKVIDLGCGEGNLLSLLLKDKSFEQI---TGVDVSYSVLERAKDRLKIDRLPEM 81 (219)
T ss_dssp -----CHHHHHHHHHHHHHHHTTC--CEEEEETCTTCHHHHHHHTSTTCCEE---EEEESCHHHHHHHHHHHTGGGSCHH
T ss_pred CCcCCcchHHHHHHHHHHHhhcCC--CEEEEecCCCCHHHHHHHhcCCCCEE---EEEECCHHHHHHHHHHHHhhccccc
Confidence 333344555566555555543333 589999999999999997643 222 223333 455555443
Q ss_pred ---cccccccccCCCCCCCCCccchhhccccccccccCCCCCChhhHHhhhhhcccCCceEEEecChH------------
Q 039518 511 ---GILGAFHDWCEPFSTYPRTYDLLHANHLFSHYKNRGEVCSLEDIMLEMDLIIRPQGFIIIRDEKS------------ 575 (617)
Q Consensus 511 ---Glig~~~~~~~~f~typrtyDl~H~~~~~s~~~~~~~~c~~~~~l~e~dRilRP~G~~i~~d~~~------------ 575 (617)
.+-=+..|. +..+.-+.+||+|-+..++.+. ..-.+..+|-|+-|+|+|||.+|.....+
T Consensus 82 ~~~~v~~~~~d~-~~~~~~~~~fD~V~~~~~l~~~----~~~~~~~~l~~~~~~LkpgG~~i~~~~~~~~~~~~~~~~~~ 156 (219)
T 3jwg_A 82 QRKRISLFQSSL-VYRDKRFSGYDAATVIEVIEHL----DENRLQAFEKVLFEFTRPQTVIVSTPNKEYNFHYGNLFEGN 156 (219)
T ss_dssp HHTTEEEEECCS-SSCCGGGTTCSEEEEESCGGGC----CHHHHHHHHHHHHTTTCCSEEEEEEEBGGGGGCCCCT----
T ss_pred cCcceEEEeCcc-cccccccCCCCEEEEHHHHHhC----CHHHHHHHHHHHHHhhCCCEEEEEccchhhhhhhcccCccc
Confidence 221122233 2222223799999999988864 11124578999999999999887753221
Q ss_pred ----------HHHHHH----hhhhcCCceEEEeecc---ccCCCceeEEEEEec
Q 039518 576 ----------LITRIR----DLAPKFLWDVELHSLE---NREKKMESVLICRKK 612 (617)
Q Consensus 576 ----------~~~~~~----~~~~~~~W~~~~~~~e---~~~~~~~~~l~~~k~ 612 (617)
..++++ +++..--+++...... +.-....+|.|++|+
T Consensus 157 ~~~~~~~~~~~~~~l~~~~~~l~~~~Gf~v~~~~~g~~~~~~g~~~qi~~~~~~ 210 (219)
T 3jwg_A 157 LRHRDHRFEWTRKEFQTWAVKVAEKYGYSVRFLQIGEIDDEFGSPTQMGVFTLG 210 (219)
T ss_dssp -GGGCCTTSBCHHHHHHHHHHHHHHHTEEEEEEEESCCCTTSCCSEEEEEEEEC
T ss_pred ccccCceeeecHHHHHHHHHHHHHHCCcEEEEEecCCccccCCCCeEEEEEecc
Confidence 122333 7777777887776322 223345789999986
No 261
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=98.18 E-value=4e-06 Score=87.35 Aligned_cols=106 Identities=9% Similarity=-0.056 Sum_probs=72.8
Q ss_pred CCCCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHh----CC-CcEEEEecCCCCCCCC---CCeeEEEe
Q 039518 227 AGVFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALER----GI-GAMISALSTKQLPYPS---SSFEMVHC 298 (617)
Q Consensus 227 ~~g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~er----g~-~~~~~~~d~~~Lpf~d---~sFDlV~~ 298 (617)
.++.+|||+|||+|..+..|++.-.....+.++|+++.+++.++++ |+ ++.+..+|+..++... ++||.|++
T Consensus 101 ~~g~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l~~~~~n~~r~g~~~v~~~~~D~~~~~~~~~~~~~fD~Vl~ 180 (309)
T 2b9e_A 101 PPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARAGVSCCELAEEDFLAVSPSDPRYHEVHYILL 180 (309)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGSCTTCGGGTTEEEEEE
T ss_pred CCCCEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEeCChHhcCccccccCCCCEEEE
Confidence 4677899999999999999987511112678889999999888765 54 5778888887765432 57999996
Q ss_pred c----c-ccc-c-----c----c-cch-------HHHHHHHHHhccCCeEEEEEeCCC
Q 039518 299 S----R-CRV-D-----W----H-AND-------GILLKEVDRVLRPNGYFVYSAPPA 333 (617)
Q Consensus 299 s----~-~l~-h-----~----~-~d~-------~~~L~el~RvLrPGG~Liis~p~~ 333 (617)
. . ... . | . ++. ..+|..+.++|+ ||+++.++-..
T Consensus 181 D~PcSg~G~~~r~pd~~~~~~~~~~~~~~l~~~Q~~iL~~a~~~l~-gG~lvYsTCs~ 237 (309)
T 2b9e_A 181 DPSCSGSGMPSRQLEEPGAGTPSPVRLHALAGFQQRALCHALTFPS-LQRLVYSTCSL 237 (309)
T ss_dssp CCCCCC------------------CCHHHHHHHHHHHHHHHTTCTT-CCEEEEEESCC
T ss_pred cCCcCCCCCCccCCChhhhccCCHHHHHHHHHHHHHHHHHHHhccC-CCEEEEECCCC
Confidence 2 1 111 0 1 1 111 236778888887 99999987543
No 262
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=98.17 E-value=2e-06 Score=82.23 Aligned_cols=133 Identities=13% Similarity=0.086 Sum_probs=90.2
Q ss_pred eeEEeccccccchhhhccCCCeEEEEeccCCCC-chhHHHHhhc--ccccccccCCCCCCCCCccchhhccccccccccC
Q 039518 469 RNAMDMNAYCGGFAVALNSLPVWVMNIVPISMK-NTLSAIYNRG--ILGAFHDWCEPFSTYPRTYDLLHANHLFSHYKNR 545 (617)
Q Consensus 469 Rn~mDm~~~~g~faa~l~~~~v~vmnv~p~~~~-~~l~~~~~RG--lig~~~~~~~~f~typrtyDl~H~~~~~s~~~~~ 545 (617)
.+|||+|||.|.++..|..... +|+-.|-. ..+..+-++. +--+..|.. .++.-+.+||+|.+.+++.++
T Consensus 43 ~~vLDiGcG~G~~~~~l~~~~~---~v~gvD~s~~~~~~a~~~~~~~~~~~~d~~-~~~~~~~~fD~v~~~~~l~~~--- 115 (203)
T 3h2b_A 43 GVILDVGSGTGRWTGHLASLGH---QIEGLEPATRLVELARQTHPSVTFHHGTIT-DLSDSPKRWAGLLAWYSLIHM--- 115 (203)
T ss_dssp SCEEEETCTTCHHHHHHHHTTC---CEEEECCCHHHHHHHHHHCTTSEEECCCGG-GGGGSCCCEEEEEEESSSTTC---
T ss_pred CeEEEecCCCCHHHHHHHhcCC---eEEEEeCCHHHHHHHHHhCCCCeEEeCccc-ccccCCCCeEEEEehhhHhcC---
Confidence 5799999999999999987654 23333444 5666666663 211222222 223223899999999888764
Q ss_pred CCCCChhhHHhhhhhcccCCceEEEecCh----------------HHHHHHHhhhhcCCceEEEeeccccCCCceeEEEE
Q 039518 546 GEVCSLEDIMLEMDLIIRPQGFIIIRDEK----------------SLITRIRDLAPKFLWDVELHSLENREKKMESVLIC 609 (617)
Q Consensus 546 ~~~c~~~~~l~e~dRilRP~G~~i~~d~~----------------~~~~~~~~~~~~~~W~~~~~~~e~~~~~~~~~l~~ 609 (617)
..-....+|-|+-|+|+|||.+++.+.. -..++++++++..-|++.......+ .+...++.
T Consensus 116 -~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~--~p~~~l~~ 192 (203)
T 3h2b_A 116 -GPGELPDALVALRMAVEDGGGLLMSFFSGPSLEPMYHPVATAYRWPLPELAQALETAGFQVTSSHWDPR--FPHAYLTA 192 (203)
T ss_dssp -CTTTHHHHHHHHHHTEEEEEEEEEEEECCSSCEEECCSSSCEEECCHHHHHHHHHHTTEEEEEEEECTT--SSEEEEEE
T ss_pred -CHHHHHHHHHHHHHHcCCCcEEEEEEccCCchhhhhchhhhhccCCHHHHHHHHHHCCCcEEEEEecCC--Ccchhhhh
Confidence 2335678999999999999999997421 2367888899999999877765544 44455544
Q ss_pred Ee
Q 039518 610 RK 611 (617)
Q Consensus 610 ~k 611 (617)
.|
T Consensus 193 ~~ 194 (203)
T 3h2b_A 193 EA 194 (203)
T ss_dssp EE
T ss_pred hh
Confidence 44
No 263
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=98.16 E-value=1.3e-06 Score=88.29 Aligned_cols=107 Identities=10% Similarity=0.166 Sum_probs=70.4
Q ss_pred HHHhccCCCCCeeeEEeccccccchhhhcc-CCCeEEEEeccCCCC-chhHHHHhh----cccccccccCCCCCCCCCcc
Q 039518 457 YWQLMNVNETEIRNAMDMNAYCGGFAVALN-SLPVWVMNIVPISMK-NTLSAIYNR----GILGAFHDWCEPFSTYPRTY 530 (617)
Q Consensus 457 y~~~~~~~~~~~Rn~mDm~~~~g~faa~l~-~~~v~vmnv~p~~~~-~~l~~~~~R----Glig~~~~~~~~f~typrty 530 (617)
..+.+++..+ .+|||+|||.|+++.+|. ..+. +|+-.|-. ..+..+-++ |+..-..-.+..+..+|.+|
T Consensus 56 ~~~~~~~~~~--~~vLDiGcG~G~~~~~l~~~~~~---~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~f 130 (287)
T 1kpg_A 56 ALGKLGLQPG--MTLLDVGCGWGATMMRAVEKYDV---NVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGWEQFDEPV 130 (287)
T ss_dssp HHTTTTCCTT--CEEEEETCTTSHHHHHHHHHHCC---EEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCGGGCCCCC
T ss_pred HHHHcCCCCc--CEEEEECCcccHHHHHHHHHcCC---EEEEEECCHHHHHHHHHHHHhcCCCCCeEEEECChhhCCCCe
Confidence 3344445554 589999999999998886 3343 33333443 566666554 43221111122223345899
Q ss_pred chhhccccccccccCCCCCChhhHHhhhhhcccCCceEEEec
Q 039518 531 DLLHANHLFSHYKNRGEVCSLEDIMLEMDLIIRPQGFIIIRD 572 (617)
Q Consensus 531 Dl~H~~~~~s~~~~~~~~c~~~~~l~e~dRilRP~G~~i~~d 572 (617)
|+|.+.++|.+. ..-....+|-|+-|+|+|||.+++.+
T Consensus 131 D~v~~~~~l~~~----~~~~~~~~l~~~~~~LkpgG~l~~~~ 168 (287)
T 1kpg_A 131 DRIVSIGAFEHF----GHERYDAFFSLAHRLLPADGVMLLHT 168 (287)
T ss_dssp SEEEEESCGGGT----CTTTHHHHHHHHHHHSCTTCEEEEEE
T ss_pred eEEEEeCchhhc----ChHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 999999998865 22346789999999999999999964
No 264
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=98.16 E-value=3e-06 Score=90.81 Aligned_cols=104 Identities=16% Similarity=0.129 Sum_probs=76.2
Q ss_pred CCCCeEEEECCCCcHHHHHhccCCCc-------------------------------------EEEeeecCCcHHHHHHH
Q 039518 227 AGVFQVLDVGCGVASFSAFLLPLDIQ-------------------------------------TMSFAPKDGHENQIQFA 269 (617)
Q Consensus 227 ~~g~rVLDIGCGtG~~a~~La~~gv~-------------------------------------~v~v~~iDis~~~lq~A 269 (617)
.++.+|||++||+|.++..++..+.. ...+.++|+++.+++.|
T Consensus 194 ~~~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~ai~~A 273 (385)
T 3ldu_A 194 KAGRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESKFKIYGYDIDEESIDIA 273 (385)
T ss_dssp CTTSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCCCCEEEEESCHHHHHHH
T ss_pred CCCCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCCceEEEEECCHHHHHHH
Confidence 34567999999999999888654211 13688999999999999
Q ss_pred HHh----CC--CcEEEEecCCCCCCCCCCeeEEEecccccccc---cchHHHHHHHHHhccC--CeEEEEEeC
Q 039518 270 LER----GI--GAMISALSTKQLPYPSSSFEMVHCSRCRVDWH---ANDGILLKEVDRVLRP--NGYFVYSAP 331 (617)
Q Consensus 270 ~er----g~--~~~~~~~d~~~Lpf~d~sFDlV~~s~~l~h~~---~d~~~~L~el~RvLrP--GG~Liis~p 331 (617)
+++ |+ .+.+...|+.+++.+ .+||+|+++--...-. ++...+..++.++|++ ||.+++.++
T Consensus 274 r~Na~~~gl~~~i~~~~~D~~~l~~~-~~~D~Iv~NPPyg~rl~~~~~l~~ly~~lg~~lk~~~g~~~~iit~ 345 (385)
T 3ldu_A 274 RENAEIAGVDEYIEFNVGDATQFKSE-DEFGFIITNPPYGERLEDKDSVKQLYKELGYAFRKLKNWSYYLITS 345 (385)
T ss_dssp HHHHHHHTCGGGEEEEECCGGGCCCS-CBSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTSBSCEEEEEES
T ss_pred HHHHHHcCCCCceEEEECChhhcCcC-CCCcEEEECCCCcCccCCHHHHHHHHHHHHHHHhhCCCCEEEEEEC
Confidence 875 55 478889999888764 5899999975332211 2344567777777877 888888765
No 265
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=98.12 E-value=4.2e-06 Score=89.98 Aligned_cols=103 Identities=12% Similarity=0.074 Sum_probs=74.0
Q ss_pred CCCeEEEECCCCcHHHHHhccCCCc-------------------------------------EEEeeecCCcHHHHHHHH
Q 039518 228 GVFQVLDVGCGVASFSAFLLPLDIQ-------------------------------------TMSFAPKDGHENQIQFAL 270 (617)
Q Consensus 228 ~g~rVLDIGCGtG~~a~~La~~gv~-------------------------------------~v~v~~iDis~~~lq~A~ 270 (617)
++..|||.+||+|.++..++..+.. ...+.++|+++.+++.|+
T Consensus 201 ~~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~al~~Ar 280 (393)
T 3k0b_A 201 PDRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQPLNIIGGDIDARLIEIAK 280 (393)
T ss_dssp TTSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHHHHHHHH
T ss_pred CCCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccCCceEEEEECCHHHHHHHH
Confidence 4566999999999998777654221 125889999999999998
Q ss_pred Hh----CC--CcEEEEecCCCCCCCCCCeeEEEecccccccc---cchHHHHHHHHHhccC--CeEEEEEeC
Q 039518 271 ER----GI--GAMISALSTKQLPYPSSSFEMVHCSRCRVDWH---ANDGILLKEVDRVLRP--NGYFVYSAP 331 (617)
Q Consensus 271 er----g~--~~~~~~~d~~~Lpf~d~sFDlV~~s~~l~h~~---~d~~~~L~el~RvLrP--GG~Liis~p 331 (617)
++ |+ .+.+..+|+.+++.+ .+||+|+++--...-. .+...+..++.+.||+ ||.+++.++
T Consensus 281 ~Na~~~gl~~~I~~~~~D~~~~~~~-~~fD~Iv~NPPYg~rl~~~~~l~~ly~~lg~~lk~~~g~~~~iit~ 351 (393)
T 3k0b_A 281 QNAVEAGLGDLITFRQLQVADFQTE-DEYGVVVANPPYGERLEDEEAVRQLYREMGIVYKRMPTWSVYVLTS 351 (393)
T ss_dssp HHHHHTTCTTCSEEEECCGGGCCCC-CCSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTCTTCEEEEEEC
T ss_pred HHHHHcCCCCceEEEECChHhCCCC-CCCCEEEECCCCccccCCchhHHHHHHHHHHHHhcCCCCEEEEEEC
Confidence 75 54 378899999888765 4899999984322111 2234456666677766 888888775
No 266
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=98.10 E-value=6.5e-06 Score=76.31 Aligned_cols=126 Identities=13% Similarity=0.134 Sum_probs=84.7
Q ss_pred eeEEeccccccchhhhccCCCeEEEEeccCCCC-chhHHHHhhc--ccccccccCCCCCCCCCccchhhccccccccccC
Q 039518 469 RNAMDMNAYCGGFAVALNSLPVWVMNIVPISMK-NTLSAIYNRG--ILGAFHDWCEPFSTYPRTYDLLHANHLFSHYKNR 545 (617)
Q Consensus 469 Rn~mDm~~~~g~faa~l~~~~v~vmnv~p~~~~-~~l~~~~~RG--lig~~~~~~~~f~typrtyDl~H~~~~~s~~~~~ 545 (617)
.+|||+|||.|.++.+|.+..- +|.-.|-. ..+..+-++. +--+..| .+++ +.+||+|.+..++.+.
T Consensus 19 ~~vLDiG~G~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~v~~~~~d--~~~~--~~~~D~v~~~~~l~~~--- 88 (170)
T 3i9f_A 19 GVIVDYGCGNGFYCKYLLEFAT---KLYCIDINVIALKEVKEKFDSVITLSDP--KEIP--DNSVDFILFANSFHDM--- 88 (170)
T ss_dssp EEEEEETCTTCTTHHHHHTTEE---EEEEECSCHHHHHHHHHHCTTSEEESSG--GGSC--TTCEEEEEEESCSTTC---
T ss_pred CeEEEECCCCCHHHHHHHhhcC---eEEEEeCCHHHHHHHHHhCCCcEEEeCC--CCCC--CCceEEEEEccchhcc---
Confidence 7899999999999999987752 55555655 6666776661 2222233 3333 3799999999988865
Q ss_pred CCCCChhhHHhhhhhcccCCceEEEecCh-------------HHHHHHHhhhhcCCceEEEeeccccCCCceeEEEEEec
Q 039518 546 GEVCSLEDIMLEMDLIIRPQGFIIIRDEK-------------SLITRIRDLAPKFLWDVELHSLENREKKMESVLICRKK 612 (617)
Q Consensus 546 ~~~c~~~~~l~e~dRilRP~G~~i~~d~~-------------~~~~~~~~~~~~~~W~~~~~~~e~~~~~~~~~l~~~k~ 612 (617)
. ....+|-|+-|+|+|||.+++.+-. -..++++++++ .|+......- ....-.+++.|+
T Consensus 89 ~---~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--Gf~~~~~~~~---~~~~~~l~~~~~ 160 (170)
T 3i9f_A 89 D---DKQHVISEVKRILKDDGRVIIIDWRKENTGIGPPLSIRMDEKDYMGWFS--NFVVEKRFNP---TPYHFGLVLKRK 160 (170)
T ss_dssp S---CHHHHHHHHHHHEEEEEEEEEEEECSSCCSSSSCGGGCCCHHHHHHHTT--TEEEEEEECS---STTEEEEEEEEC
T ss_pred c---CHHHHHHHHHHhcCCCCEEEEEEcCccccccCchHhhhcCHHHHHHHHh--CcEEEEccCC---CCceEEEEEecC
Confidence 2 4678999999999999999997321 12456666666 6665444321 123456666654
No 267
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=98.08 E-value=8.7e-06 Score=79.40 Aligned_cols=114 Identities=16% Similarity=0.183 Sum_probs=71.0
Q ss_pred hhhHHHHHHHHHHhccCCCCCeeeEEeccccccchhhhccCCCeEEEEeccCCCC-chhHHHHhh----cc-ccc-cccc
Q 039518 447 TSFWQDQVRHYWQLMNVNETEIRNAMDMNAYCGGFAVALNSLPVWVMNIVPISMK-NTLSAIYNR----GI-LGA-FHDW 519 (617)
Q Consensus 447 ~~~w~~~v~~y~~~~~~~~~~~Rn~mDm~~~~g~faa~l~~~~v~vmnv~p~~~~-~~l~~~~~R----Gl-ig~-~~~~ 519 (617)
.+.|.+.+..+..... ..-.+|||+|||.|.++..|..... +++-.|.. ..+..+-++ |+ +-+ ..|.
T Consensus 20 ~~~~~~~~~~~l~~~~---~~~~~vLdiG~G~G~~~~~l~~~~~---~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~d~ 93 (246)
T 1y8c_A 20 YKKWSDFIIEKCVENN---LVFDDYLDLACGTGNLTENLCPKFK---NTWAVDLSQEMLSEAENKFRSQGLKPRLACQDI 93 (246)
T ss_dssp HHHHHHHHHHHHHTTT---CCTTEEEEETCTTSTTHHHHGGGSS---EEEEECSCHHHHHHHHHHHHHTTCCCEEECCCG
T ss_pred HHHHHHHHHHHHHHhC---CCCCeEEEeCCCCCHHHHHHHHCCC---cEEEEECCHHHHHHHHHHHhhcCCCeEEEeccc
Confidence 3445555555444221 1235899999999999999987754 23333443 445444443 22 111 1222
Q ss_pred CCCCCCCCCccchhhccc-cccccccCCCCCChhhHHhhhhhcccCCceEEEe
Q 039518 520 CEPFSTYPRTYDLLHANH-LFSHYKNRGEVCSLEDIMLEMDLIIRPQGFIIIR 571 (617)
Q Consensus 520 ~~~f~typrtyDl~H~~~-~~s~~~~~~~~c~~~~~l~e~dRilRP~G~~i~~ 571 (617)
. .++ +|.+||+|.+.. +|.+. .+.=....+|-++-|+|+|||.+++.
T Consensus 94 ~-~~~-~~~~fD~v~~~~~~l~~~---~~~~~~~~~l~~~~~~L~pgG~l~~~ 141 (246)
T 1y8c_A 94 S-NLN-INRKFDLITCCLDSTNYI---IDSDDLKKYFKAVSNHLKEGGVFIFD 141 (246)
T ss_dssp G-GCC-CSCCEEEEEECTTGGGGC---CSHHHHHHHHHHHHTTEEEEEEEEEE
T ss_pred c-cCC-ccCCceEEEEcCcccccc---CCHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 2 222 358999999987 88754 22234568899999999999999983
No 268
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=98.08 E-value=5.4e-06 Score=79.30 Aligned_cols=94 Identities=13% Similarity=0.144 Sum_probs=64.7
Q ss_pred eEEeccccccchhhhccCCCeEEEEeccCCCC-chhHHHHhh----ccc---c-cccccCCCCCCCCCccchhhcccccc
Q 039518 470 NAMDMNAYCGGFAVALNSLPVWVMNIVPISMK-NTLSAIYNR----GIL---G-AFHDWCEPFSTYPRTYDLLHANHLFS 540 (617)
Q Consensus 470 n~mDm~~~~g~faa~l~~~~v~vmnv~p~~~~-~~l~~~~~R----Gli---g-~~~~~~~~f~typrtyDl~H~~~~~s 540 (617)
+|||+|||.|.++..|...+- .+|+-.|-. ..+..+-++ |+- - +..|..+ ++.-+.+||+|.+..++.
T Consensus 46 ~vLdiG~G~G~~~~~l~~~~~--~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~~D~v~~~~~l~ 122 (219)
T 3dlc_A 46 TCIDIGSGPGALSIALAKQSD--FSIRALDFSKHMNEIALKNIADANLNDRIQIVQGDVHN-IPIEDNYADLIVSRGSVF 122 (219)
T ss_dssp EEEEETCTTSHHHHHHHHHSE--EEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECBTTB-CSSCTTCEEEEEEESCGG
T ss_pred EEEEECCCCCHHHHHHHHcCC--CeEEEEECCHHHHHHHHHHHHhccccCceEEEEcCHHH-CCCCcccccEEEECchHh
Confidence 899999999999999987632 233334443 555555555 432 2 2223322 332238999999998887
Q ss_pred ccccCCCCCChhhHHhhhhhcccCCceEEEec
Q 039518 541 HYKNRGEVCSLEDIMLEMDLIIRPQGFIIIRD 572 (617)
Q Consensus 541 ~~~~~~~~c~~~~~l~e~dRilRP~G~~i~~d 572 (617)
++ -....+|-|+-|+|+|||.+++.+
T Consensus 123 ~~------~~~~~~l~~~~~~L~pgG~l~~~~ 148 (219)
T 3dlc_A 123 FW------EDVATAFREIYRILKSGGKTYIGG 148 (219)
T ss_dssp GC------SCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred hc------cCHHHHHHHHHHhCCCCCEEEEEe
Confidence 64 235689999999999999999974
No 269
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=98.07 E-value=5.1e-06 Score=89.33 Aligned_cols=98 Identities=13% Similarity=0.067 Sum_probs=73.7
Q ss_pred CCCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHh----CCC---cEEEEecCCCC-C-CCCCCeeEEEe
Q 039518 228 GVFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALER----GIG---AMISALSTKQL-P-YPSSSFEMVHC 298 (617)
Q Consensus 228 ~g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~er----g~~---~~~~~~d~~~L-p-f~d~sFDlV~~ 298 (617)
++.+|||++||+|.++..++++...+..++++|+++.+++.++++ ++. +.+..+|+.++ . ...+.||+|++
T Consensus 52 ~g~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~~~av~~~~~N~~~Ngl~~~~v~v~~~Da~~~l~~~~~~~fD~V~l 131 (392)
T 3axs_A 52 RPVKVADPLSASGIRAIRFLLETSCVEKAYANDISSKAIEIMKENFKLNNIPEDRYEIHGMEANFFLRKEWGFGFDYVDL 131 (392)
T ss_dssp SCEEEEESSCTTSHHHHHHHHHCSCEEEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHHHSCCSSCEEEEEE
T ss_pred CCCEEEECCCcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHhCCCCceEEEEeCCHHHHHHHhhCCCCcEEEE
Confidence 456799999999999999988522234788899999999988875 543 66777775332 1 12457999996
Q ss_pred cccccccccchHHHHHHHHHhccCCeEEEEEe
Q 039518 299 SRCRVDWHANDGILLKEVDRVLRPNGYFVYSA 330 (617)
Q Consensus 299 s~~l~h~~~d~~~~L~el~RvLrPGG~Liis~ 330 (617)
.- . ..+..++..+.++|+|||.++++.
T Consensus 132 DP----~-g~~~~~l~~a~~~Lk~gGll~~t~ 158 (392)
T 3axs_A 132 DP----F-GTPVPFIESVALSMKRGGILSLTA 158 (392)
T ss_dssp CC----S-SCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred CC----C-cCHHHHHHHHHHHhCCCCEEEEEe
Confidence 53 2 234568999999999999998876
No 270
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=98.07 E-value=3.2e-06 Score=86.79 Aligned_cols=139 Identities=14% Similarity=0.089 Sum_probs=87.9
Q ss_pred CCCCCeeeEEeccccccchhhhcc--CCCeEEEEeccCCCC-chhHHHHhh----ccc---cc-ccccCCCCCCCCCccc
Q 039518 463 VNETEIRNAMDMNAYCGGFAVALN--SLPVWVMNIVPISMK-NTLSAIYNR----GIL---GA-FHDWCEPFSTYPRTYD 531 (617)
Q Consensus 463 ~~~~~~Rn~mDm~~~~g~faa~l~--~~~v~vmnv~p~~~~-~~l~~~~~R----Gli---g~-~~~~~~~f~typrtyD 531 (617)
+..+ .+|||+|||.|.++.+|. ..+-. +|+-.|-. ..+..+-++ |+- -+ ..|..+ ++ +|.+||
T Consensus 116 l~~~--~~vLDiGcG~G~~~~~la~~~~~~~--~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~-~~~~fD 189 (305)
T 3ocj_A 116 LRPG--CVVASVPCGWMSELLALDYSACPGV--QLVGIDYDPEALDGATRLAAGHALAGQITLHRQDAWK-LD-TREGYD 189 (305)
T ss_dssp CCTT--CEEEETTCTTCHHHHTSCCTTCTTC--EEEEEESCHHHHHHHHHHHTTSTTGGGEEEEECCGGG-CC-CCSCEE
T ss_pred CCCC--CEEEEecCCCCHHHHHHHHhcCCCC--eEEEEECCHHHHHHHHHHHHhcCCCCceEEEECchhc-CC-ccCCeE
Confidence 4444 579999999999999983 33211 22223333 444444433 332 11 223322 22 358999
Q ss_pred hhhccccccccccCCCCCChhhHHhhhhhcccCCceEEEecCh-------------------------------------
Q 039518 532 LLHANHLFSHYKNRGEVCSLEDIMLEMDLIIRPQGFIIIRDEK------------------------------------- 574 (617)
Q Consensus 532 l~H~~~~~s~~~~~~~~c~~~~~l~e~dRilRP~G~~i~~d~~------------------------------------- 574 (617)
+|.+.+++.+. .+.-....+|-|+-|+|||||.+++.+..
T Consensus 190 ~v~~~~~~~~~---~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (305)
T 3ocj_A 190 LLTSNGLNIYE---PDDARVTELYRRFWQALKPGGALVTSFLTPPPALSPDSPWDMQAIDPHDLQLQQLVFTRLIQPRWN 266 (305)
T ss_dssp EEECCSSGGGC---CCHHHHHHHHHHHHHHEEEEEEEEEECCCCCTTTCTTCCCCGGGSCHHHHHHHHHHHHHTTCCSCC
T ss_pred EEEECChhhhc---CCHHHHHHHHHHHHHhcCCCeEEEEEecCCCCcccccccceeeccccchhhhhhhHHHHHHhhhhh
Confidence 99998887754 33322334799999999999999998611
Q ss_pred --HHHHHHHhhhhcCCceEEEeeccccCCCceeEEEEEec
Q 039518 575 --SLITRIRDLAPKFLWDVELHSLENREKKMESVLICRKK 612 (617)
Q Consensus 575 --~~~~~~~~~~~~~~W~~~~~~~e~~~~~~~~~l~~~k~ 612 (617)
...++++++++.--++...... .....-.+++++|+
T Consensus 267 ~~~~~~~~~~~l~~aGF~~v~~~~--~~~~~~~~v~a~Kp 304 (305)
T 3ocj_A 267 ALRTHAQTRAQLEEAGFTDLRFED--DRARLFPTVIARKP 304 (305)
T ss_dssp CCCCHHHHHHHHHHTTCEEEEEEC--CTTSSSCEEEEECC
T ss_pred ccCCHHHHHHHHHHCCCEEEEEEc--ccCceeeEEEEecC
Confidence 1367788888888888765543 22334567888886
No 271
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=98.06 E-value=3e-06 Score=79.88 Aligned_cols=144 Identities=12% Similarity=0.037 Sum_probs=81.4
Q ss_pred CCCCCeeeEEeccccccchhhhccCCCeEEEEeccCCCC-chhHHHHh----hcc--cccccccCCCCCCC-CCccchhh
Q 039518 463 VNETEIRNAMDMNAYCGGFAVALNSLPVWVMNIVPISMK-NTLSAIYN----RGI--LGAFHDWCEPFSTY-PRTYDLLH 534 (617)
Q Consensus 463 ~~~~~~Rn~mDm~~~~g~faa~l~~~~v~vmnv~p~~~~-~~l~~~~~----RGl--ig~~~~~~~~f~ty-prtyDl~H 534 (617)
+..+ ..|||+|||.|.++..|.+...-|.- .|-. ..+..+-+ .|+ +-+.++-.+.+..+ +.+||+|.
T Consensus 20 ~~~~--~~vLDiGcG~G~~~~~la~~~~~v~~---vD~s~~~l~~a~~~~~~~~~~~v~~~~~~~~~l~~~~~~~fD~v~ 94 (185)
T 3mti_A 20 LDDE--SIVVDATMGNGNDTAFLAGLSKKVYA---FDVQEQALGKTSQRLSDLGIENTELILDGHENLDHYVREPIRAAI 94 (185)
T ss_dssp CCTT--CEEEESCCTTSHHHHHHHTTSSEEEE---EESCHHHHHHHHHHHHHHTCCCEEEEESCGGGGGGTCCSCEEEEE
T ss_pred CCCC--CEEEEEcCCCCHHHHHHHHhCCEEEE---EECCHHHHHHHHHHHHHcCCCcEEEEeCcHHHHHhhccCCcCEEE
Confidence 4444 47999999999999999877433333 3433 44444433 354 33344333443323 47899996
Q ss_pred cc-cccccccc--CCCCCChhhHHhhhhhcccCCceEEEecC------hHHHHHHHhhhhcCC---ceEEEeeccccCCC
Q 039518 535 AN-HLFSHYKN--RGEVCSLEDIMLEMDLIIRPQGFIIIRDE------KSLITRIRDLAPKFL---WDVELHSLENREKK 602 (617)
Q Consensus 535 ~~-~~~s~~~~--~~~~c~~~~~l~e~dRilRP~G~~i~~d~------~~~~~~~~~~~~~~~---W~~~~~~~e~~~~~ 602 (617)
++ +.+..-.. ....-.....|-|+-|+|+|||.+++..- .+..+.+.+.+..+. |.+.....-+....
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 174 (185)
T 3mti_A 95 FNLGYLPSADKSVITKPHTTLEAIEKILDRLEVGGRLAIMIYYGHDGGDMEKDAVLEYVIGLDQRVFTAMLYQPLNQINT 174 (185)
T ss_dssp EEEC-----------CHHHHHHHHHHHHHHEEEEEEEEEEEC------CHHHHHHHHHHHHSCTTTEEEEEEEESSCSSC
T ss_pred EeCCCCCCcchhcccChhhHHHHHHHHHHhcCCCcEEEEEEeCCCCCCHHHHHHHHHHHHhCCCceEEEEEehhhccCCC
Confidence 54 22221000 00001123567899999999999998632 234455666665554 77766554444344
Q ss_pred ceeEEEEEe
Q 039518 603 MESVLICRK 611 (617)
Q Consensus 603 ~~~~l~~~k 611 (617)
+..+++..|
T Consensus 175 ~~~~~~i~~ 183 (185)
T 3mti_A 175 PPFLVMLEK 183 (185)
T ss_dssp CCEEEEEEE
T ss_pred CCeEEEEEe
Confidence 556666665
No 272
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=98.06 E-value=3.5e-06 Score=86.12 Aligned_cols=104 Identities=12% Similarity=0.108 Sum_probs=65.6
Q ss_pred cCCCCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHH---hCCCcEEEEecCCCCCCCCCCeeEEEecccc
Q 039518 226 SAGVFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALE---RGIGAMISALSTKQLPYPSSSFEMVHCSRCR 302 (617)
Q Consensus 226 ~~~g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~e---rg~~~~~~~~d~~~Lpf~d~sFDlV~~s~~l 302 (617)
+.++.+|||+|||+|.|+.+++++.. +..+.++|+...+...... .+.++.....+++...++.+.||+|+|..+.
T Consensus 72 l~~~~~VLDLGaAPGGWSQvAa~~~~-~~~v~g~dVGvDl~~~pi~~~~~g~~ii~~~~~~dv~~l~~~~~DlVlsD~ap 150 (277)
T 3evf_A 72 VKLEGRVIDLGCGRGGWCYYAAAQKE-VSGVKGFTLGRDGHEKPMNVQSLGWNIITFKDKTDIHRLEPVKCDTLLCDIGE 150 (277)
T ss_dssp SCCCEEEEEETCTTCHHHHHHHTSTT-EEEEEEECCCCTTCCCCCCCCBTTGGGEEEECSCCTTTSCCCCCSEEEECCCC
T ss_pred CCCCCEEEEecCCCCHHHHHHHHhcC-CCcceeEEEeccCcccccccCcCCCCeEEEeccceehhcCCCCccEEEecCcc
Confidence 45677899999999999998877621 2244455554322000100 1224444555555566778899999986522
Q ss_pred ---cccccchH--HHHHHHHHhccCC-eEEEEEe
Q 039518 303 ---VDWHANDG--ILLKEVDRVLRPN-GYFVYSA 330 (617)
Q Consensus 303 ---~h~~~d~~--~~L~el~RvLrPG-G~Liis~ 330 (617)
+++.+... .+|..+.++|+|| |.|++-.
T Consensus 151 nsG~~~~D~~rs~~LL~~a~~~LkpG~G~FV~KV 184 (277)
T 3evf_A 151 SSSSSVTEGERTVRVLDTVEKWLACGVDNFCVKV 184 (277)
T ss_dssp CCSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEE
T ss_pred CcCchHHHHHHHHHHHHHHHHHhCCCCCeEEEEe
Confidence 22332222 3578889999999 9999965
No 273
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=98.06 E-value=7.9e-06 Score=87.65 Aligned_cols=103 Identities=11% Similarity=0.101 Sum_probs=75.3
Q ss_pred CCCeEEEECCCCcHHHHHhccCCCc-------------------------------------EEEeeecCCcHHHHHHHH
Q 039518 228 GVFQVLDVGCGVASFSAFLLPLDIQ-------------------------------------TMSFAPKDGHENQIQFAL 270 (617)
Q Consensus 228 ~g~rVLDIGCGtG~~a~~La~~gv~-------------------------------------~v~v~~iDis~~~lq~A~ 270 (617)
++..+||.+||+|.++..++..+.. ...+.++|+++.+++.|+
T Consensus 194 ~~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~v~GvDid~~al~~Ar 273 (384)
T 3ldg_A 194 PDKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQLDISGFDFDGRMVEIAR 273 (384)
T ss_dssp TTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHHHHHHHH
T ss_pred CCCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCCceEEEEECCHHHHHHHH
Confidence 4566999999999998877654221 125889999999999998
Q ss_pred Hh----CC--CcEEEEecCCCCCCCCCCeeEEEecccccccc---cchHHHHHHHHHhccC--CeEEEEEeC
Q 039518 271 ER----GI--GAMISALSTKQLPYPSSSFEMVHCSRCRVDWH---ANDGILLKEVDRVLRP--NGYFVYSAP 331 (617)
Q Consensus 271 er----g~--~~~~~~~d~~~Lpf~d~sFDlV~~s~~l~h~~---~d~~~~L~el~RvLrP--GG~Liis~p 331 (617)
++ |+ .+.+...|+.+++.++ +||+|+++--...-. .+...+..++.+.||+ ||.+++.++
T Consensus 274 ~Na~~~gl~~~I~~~~~D~~~l~~~~-~fD~Iv~NPPYG~rl~~~~~l~~ly~~lg~~lk~~~g~~~~iit~ 344 (384)
T 3ldg_A 274 KNAREVGLEDVVKLKQMRLQDFKTNK-INGVLISNPPYGERLLDDKAVDILYNEMGETFAPLKTWSQFILTN 344 (384)
T ss_dssp HHHHHTTCTTTEEEEECCGGGCCCCC-CSCEEEECCCCTTTTSCHHHHHHHHHHHHHHHTTCTTSEEEEEES
T ss_pred HHHHHcCCCCceEEEECChHHCCccC-CcCEEEECCchhhccCCHHHHHHHHHHHHHHHhhCCCcEEEEEEC
Confidence 75 54 3788899998887654 899999974222111 2345567777778876 998888775
No 274
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=98.06 E-value=1.3e-06 Score=88.49 Aligned_cols=93 Identities=15% Similarity=0.158 Sum_probs=61.8
Q ss_pred eeEEeccccccchhhhccCCCeEEEEeccCCCC-chhHHHHhhcccccccccCCCCCCCCCccchhhccccccccccCCC
Q 039518 469 RNAMDMNAYCGGFAVALNSLPVWVMNIVPISMK-NTLSAIYNRGILGAFHDWCEPFSTYPRTYDLLHANHLFSHYKNRGE 547 (617)
Q Consensus 469 Rn~mDm~~~~g~faa~l~~~~v~vmnv~p~~~~-~~l~~~~~RGlig~~~~~~~~f~typrtyDl~H~~~~~s~~~~~~~ 547 (617)
.+|||+|||.|.++..|.+.--=|.-| |-. ..|..+-++.=|-..+.=-|.++.=+.+||+|.+...| +|
T Consensus 41 ~~vLDvGcGtG~~~~~l~~~~~~v~gv---D~s~~ml~~a~~~~~v~~~~~~~e~~~~~~~sfD~v~~~~~~-h~----- 111 (257)
T 4hg2_A 41 GDALDCGCGSGQASLGLAEFFERVHAV---DPGEAQIRQALRHPRVTYAVAPAEDTGLPPASVDVAIAAQAM-HW----- 111 (257)
T ss_dssp SEEEEESCTTTTTHHHHHTTCSEEEEE---ESCHHHHHTCCCCTTEEEEECCTTCCCCCSSCEEEEEECSCC-TT-----
T ss_pred CCEEEEcCCCCHHHHHHHHhCCEEEEE---eCcHHhhhhhhhcCCceeehhhhhhhcccCCcccEEEEeeeh-hH-----
Confidence 479999999999999998764333333 333 44443333321222222223444323899999999888 45
Q ss_pred CCChhhHHhhhhhcccCCceEEEe
Q 039518 548 VCSLEDIMLEMDLIIRPQGFIIIR 571 (617)
Q Consensus 548 ~c~~~~~l~e~dRilRP~G~~i~~ 571 (617)
.+.+..+-|+-|||||||.+++-
T Consensus 112 -~~~~~~~~e~~rvLkpgG~l~~~ 134 (257)
T 4hg2_A 112 -FDLDRFWAELRRVARPGAVFAAV 134 (257)
T ss_dssp -CCHHHHHHHHHHHEEEEEEEEEE
T ss_pred -hhHHHHHHHHHHHcCCCCEEEEE
Confidence 24678999999999999999874
No 275
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=98.05 E-value=4.8e-06 Score=84.38 Aligned_cols=81 Identities=14% Similarity=0.179 Sum_probs=62.0
Q ss_pred HHHHHHHhhhhhccCCcccCCCCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHhC---CCcEEEEecCC
Q 039518 208 EYIQRLGNMMTNETGNLRSAGVFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALERG---IGAMISALSTK 284 (617)
Q Consensus 208 ~Y~~~L~~~L~~~~~~lr~~~g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~erg---~~~~~~~~d~~ 284 (617)
...+.+.+.+. ..++.+|||||||+|.++..|++++. .++++|+++.+++.++++. .++.+..+|+.
T Consensus 16 ~i~~~iv~~~~-------~~~~~~VLEIG~G~G~lt~~La~~~~---~V~avEid~~~~~~~~~~~~~~~~v~~i~~D~~ 85 (255)
T 3tqs_A 16 FVLQKIVSAIH-------PQKTDTLVEIGPGRGALTDYLLTECD---NLALVEIDRDLVAFLQKKYNQQKNITIYQNDAL 85 (255)
T ss_dssp HHHHHHHHHHC-------CCTTCEEEEECCTTTTTHHHHTTTSS---EEEEEECCHHHHHHHHHHHTTCTTEEEEESCTT
T ss_pred HHHHHHHHhcC-------CCCcCEEEEEcccccHHHHHHHHhCC---EEEEEECCHHHHHHHHHHHhhCCCcEEEEcchH
Confidence 44455555542 23456799999999999999999863 6788899999999998873 46889999998
Q ss_pred CCCCCC----CCeeEEEec
Q 039518 285 QLPYPS----SSFEMVHCS 299 (617)
Q Consensus 285 ~Lpf~d----~sFDlV~~s 299 (617)
.+++++ ++|| |+++
T Consensus 86 ~~~~~~~~~~~~~~-vv~N 103 (255)
T 3tqs_A 86 QFDFSSVKTDKPLR-VVGN 103 (255)
T ss_dssp TCCGGGSCCSSCEE-EEEE
T ss_pred hCCHHHhccCCCeE-EEec
Confidence 887643 5688 5555
No 276
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=98.04 E-value=2.7e-06 Score=82.15 Aligned_cols=132 Identities=14% Similarity=0.160 Sum_probs=84.8
Q ss_pred eeeEEeccccccchhhhccCCCeEEEEeccCCCC-chhHHHHhh---cccccccccCCCCCCCCCccchhhccccccccc
Q 039518 468 IRNAMDMNAYCGGFAVALNSLPVWVMNIVPISMK-NTLSAIYNR---GILGAFHDWCEPFSTYPRTYDLLHANHLFSHYK 543 (617)
Q Consensus 468 ~Rn~mDm~~~~g~faa~l~~~~v~vmnv~p~~~~-~~l~~~~~R---Glig~~~~~~~~f~typrtyDl~H~~~~~s~~~ 543 (617)
-.+|||+|||.|.++..|..... +|+-.|-. ..+..+-++ ++--+..|..+ ++ ++.+||+|.+..++.+.
T Consensus 46 ~~~vLDiGcG~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~d~~~-~~-~~~~fD~v~~~~~l~~~- 119 (220)
T 3hnr_A 46 FGNVLEFGVGTGNLTNKLLLAGR---TVYGIEPSREMRMIAKEKLPKEFSITEGDFLS-FE-VPTSIDTIVSTYAFHHL- 119 (220)
T ss_dssp CSEEEEECCTTSHHHHHHHHTTC---EEEEECSCHHHHHHHHHHSCTTCCEESCCSSS-CC-CCSCCSEEEEESCGGGS-
T ss_pred CCeEEEeCCCCCHHHHHHHhCCC---eEEEEeCCHHHHHHHHHhCCCceEEEeCChhh-cC-CCCCeEEEEECcchhcC-
Confidence 36899999999999999987754 33334444 555555555 22222223322 22 23899999999888764
Q ss_pred cCCCCCChhhHHhhhhhcccCCceEEEecCh----H---------------------------HHHHHHhhhhcCCceEE
Q 039518 544 NRGEVCSLEDIMLEMDLIIRPQGFIIIRDEK----S---------------------------LITRIRDLAPKFLWDVE 592 (617)
Q Consensus 544 ~~~~~c~~~~~l~e~dRilRP~G~~i~~d~~----~---------------------------~~~~~~~~~~~~~W~~~ 592 (617)
.+. ....+|-|+-|+|+|||.+++.+.. . ..++++++++.--+++.
T Consensus 120 --~~~-~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~v~ 196 (220)
T 3hnr_A 120 --TDD-EKNVAIAKYSQLLNKGGKIVFADTIFADQDAYDKTVEAAKQRGFHQLANDLQTEYYTRIPVMQTIFENNGFHVT 196 (220)
T ss_dssp --CHH-HHHHHHHHHHHHSCTTCEEEEEEECBSSHHHHHHHHHHHHHTTCHHHHHHHHHSCCCBHHHHHHHHHHTTEEEE
T ss_pred --ChH-HHHHHHHHHHHhcCCCCEEEEEeccccChHHHHHHHHHHHhCCCccchhhcchhhcCCHHHHHHHHHHCCCEEE
Confidence 111 1123899999999999999997411 1 13667788888888776
Q ss_pred EeeccccCCCceeEEEEEec
Q 039518 593 LHSLENREKKMESVLICRKK 612 (617)
Q Consensus 593 ~~~~e~~~~~~~~~l~~~k~ 612 (617)
..... .-.=++.++|+
T Consensus 197 ~~~~~----~~~w~~~~~~~ 212 (220)
T 3hnr_A 197 FTRLN----HFVWVMEATKQ 212 (220)
T ss_dssp EEECS----SSEEEEEEEEC
T ss_pred Eeecc----ceEEEEeehhh
Confidence 66532 22345666664
No 277
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=98.02 E-value=2.9e-06 Score=86.74 Aligned_cols=107 Identities=13% Similarity=0.200 Sum_probs=71.9
Q ss_pred HHHHhccCCCCCeeeEEeccccccchhhhccCC-CeEEEEeccCCCC-chhHHHHhh----ccc----ccccccCCCCCC
Q 039518 456 HYWQLMNVNETEIRNAMDMNAYCGGFAVALNSL-PVWVMNIVPISMK-NTLSAIYNR----GIL----GAFHDWCEPFST 525 (617)
Q Consensus 456 ~y~~~~~~~~~~~Rn~mDm~~~~g~faa~l~~~-~v~vmnv~p~~~~-~~l~~~~~R----Gli----g~~~~~~~~f~t 525 (617)
...+.+++..+ .+|||+|||.|+++..|... +. +|+-.|-. ..+..+-++ |+- -+..|+.+ +
T Consensus 63 ~~~~~~~~~~~--~~vLDiGcG~G~~~~~la~~~~~---~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~-- 134 (302)
T 3hem_A 63 LALDKLNLEPG--MTLLDIGCGWGSTMRHAVAEYDV---NVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGWEE-F-- 134 (302)
T ss_dssp HHHHTTCCCTT--CEEEEETCTTSHHHHHHHHHHCC---EEEEEECCHHHHHHHHHHHHHSCCSSCEEEEECCGGG-C--
T ss_pred HHHHHcCCCCc--CEEEEeeccCcHHHHHHHHhCCC---EEEEEECCHHHHHHHHHHHHhcCCCCceEEEECCHHH-c--
Confidence 33444445554 58999999999999998766 53 23333443 566665554 442 12233332 2
Q ss_pred CCCccchhhccccccccccCC----CCCChhhHHhhhhhcccCCceEEEec
Q 039518 526 YPRTYDLLHANHLFSHYKNRG----EVCSLEDIMLEMDLIIRPQGFIIIRD 572 (617)
Q Consensus 526 yprtyDl~H~~~~~s~~~~~~----~~c~~~~~l~e~dRilRP~G~~i~~d 572 (617)
+.+||+|.+..+|.+.. .. ..-....+|-|+-|+|+|||.+++.+
T Consensus 135 -~~~fD~v~~~~~~~~~~-d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 183 (302)
T 3hem_A 135 -DEPVDRIVSLGAFEHFA-DGAGDAGFERYDTFFKKFYNLTPDDGRMLLHT 183 (302)
T ss_dssp -CCCCSEEEEESCGGGTT-CCSSCCCTTHHHHHHHHHHHSSCTTCEEEEEE
T ss_pred -CCCccEEEEcchHHhcC-ccccccchhHHHHHHHHHHHhcCCCcEEEEEE
Confidence 79999999999988651 11 22445689999999999999999973
No 278
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=98.01 E-value=3.7e-06 Score=86.47 Aligned_cols=110 Identities=11% Similarity=0.145 Sum_probs=71.1
Q ss_pred HHHHHHhccCCCCCeeeEEeccccccchhhhccCC-CeEEEEeccCCCC-chhHHHHhh----cccccccccCCCCCCCC
Q 039518 454 VRHYWQLMNVNETEIRNAMDMNAYCGGFAVALNSL-PVWVMNIVPISMK-NTLSAIYNR----GILGAFHDWCEPFSTYP 527 (617)
Q Consensus 454 v~~y~~~~~~~~~~~Rn~mDm~~~~g~faa~l~~~-~v~vmnv~p~~~~-~~l~~~~~R----Glig~~~~~~~~f~typ 527 (617)
++...+.+++..+ .+|||+|||.|.++..|.+. +. +|+-.|-. ..+..+-++ |+-....-.+..+..+|
T Consensus 79 ~~~~~~~~~~~~~--~~vLDiGcG~G~~~~~la~~~~~---~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~ 153 (318)
T 2fk8_A 79 VDLNLDKLDLKPG--MTLLDIGCGWGTTMRRAVERFDV---NVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGWEDFA 153 (318)
T ss_dssp HHHHHTTSCCCTT--CEEEEESCTTSHHHHHHHHHHCC---EEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCGGGCC
T ss_pred HHHHHHhcCCCCc--CEEEEEcccchHHHHHHHHHCCC---EEEEEECCHHHHHHHHHHHHhcCCCCceEEEECChHHCC
Confidence 3334444445554 47999999999999888755 43 23333433 566555555 44221111122223346
Q ss_pred CccchhhccccccccccCCCCCChhhHHhhhhhcccCCceEEEec
Q 039518 528 RTYDLLHANHLFSHYKNRGEVCSLEDIMLEMDLIIRPQGFIIIRD 572 (617)
Q Consensus 528 rtyDl~H~~~~~s~~~~~~~~c~~~~~l~e~dRilRP~G~~i~~d 572 (617)
.+||+|.+..+|.+. ..-....+|-|+-|+|+|||.+++.+
T Consensus 154 ~~fD~v~~~~~l~~~----~~~~~~~~l~~~~~~LkpgG~l~~~~ 194 (318)
T 2fk8_A 154 EPVDRIVSIEAFEHF----GHENYDDFFKRCFNIMPADGRMTVQS 194 (318)
T ss_dssp CCCSEEEEESCGGGT----CGGGHHHHHHHHHHHSCTTCEEEEEE
T ss_pred CCcCEEEEeChHHhc----CHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 899999999888754 12345689999999999999999963
No 279
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=98.00 E-value=3.3e-06 Score=83.54 Aligned_cols=105 Identities=10% Similarity=0.112 Sum_probs=67.8
Q ss_pred HHHHHhccCCCCCeeeEEeccccccchhhhccCC-CeEEEEeccCCCC-chhHHHHh----hccc---c-cccccCCCCC
Q 039518 455 RHYWQLMNVNETEIRNAMDMNAYCGGFAVALNSL-PVWVMNIVPISMK-NTLSAIYN----RGIL---G-AFHDWCEPFS 524 (617)
Q Consensus 455 ~~y~~~~~~~~~~~Rn~mDm~~~~g~faa~l~~~-~v~vmnv~p~~~~-~~l~~~~~----RGli---g-~~~~~~~~f~ 524 (617)
....+.+++..+ .+|||+|||.|.++.+|... +.-| +-.|-. ..+..+-+ .|+- - ...|+.+ ++
T Consensus 26 ~~l~~~~~~~~~--~~VLDiGcG~G~~~~~la~~~~~~v---~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~~~-~~ 99 (256)
T 1nkv_A 26 ATLGRVLRMKPG--TRILDLGSGSGEMLCTWARDHGITG---TGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAG-YV 99 (256)
T ss_dssp HHHHHHTCCCTT--CEEEEETCTTCHHHHHHHHHTCCEE---EEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCTT-CC
T ss_pred HHHHHhcCCCCC--CEEEEECCCCCHHHHHHHHhcCCeE---EEEeCCHHHHHHHHHHHHhcCCCcceEEEECChHh-CC
Confidence 334444555555 48999999999998888643 3222 222333 44444433 3442 1 2233332 33
Q ss_pred CCCCccchhhccccccccccCCCCCChhhHHhhhhhcccCCceEEEec
Q 039518 525 TYPRTYDLLHANHLFSHYKNRGEVCSLEDIMLEMDLIIRPQGFIIIRD 572 (617)
Q Consensus 525 typrtyDl~H~~~~~s~~~~~~~~c~~~~~l~e~dRilRP~G~~i~~d 572 (617)
. +.+||+|.+.+++.++ . +...+|-|+-|+|||||.+++.+
T Consensus 100 ~-~~~fD~V~~~~~~~~~---~---~~~~~l~~~~r~LkpgG~l~~~~ 140 (256)
T 1nkv_A 100 A-NEKCDVAACVGATWIA---G---GFAGAEELLAQSLKPGGIMLIGE 140 (256)
T ss_dssp C-SSCEEEEEEESCGGGT---S---SSHHHHHHHTTSEEEEEEEEEEE
T ss_pred c-CCCCCEEEECCChHhc---C---CHHHHHHHHHHHcCCCeEEEEec
Confidence 2 6899999998877654 2 35789999999999999999974
No 280
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=98.00 E-value=1.6e-06 Score=85.59 Aligned_cols=122 Identities=13% Similarity=0.078 Sum_probs=78.5
Q ss_pred CCeeeEEeccccccchhhhccCCCeEEEEeccCCCC-chhHHHHhhc----ccc-cccccCCCCCCCCCccchhhccccc
Q 039518 466 TEIRNAMDMNAYCGGFAVALNSLPVWVMNIVPISMK-NTLSAIYNRG----ILG-AFHDWCEPFSTYPRTYDLLHANHLF 539 (617)
Q Consensus 466 ~~~Rn~mDm~~~~g~faa~l~~~~v~vmnv~p~~~~-~~l~~~~~RG----lig-~~~~~~~~f~typrtyDl~H~~~~~ 539 (617)
..-.+|||+|||.|.++..|..... -+|.-.|-. ..+..+-++- -+- +..|..+ ++.-+.+||+|.+..++
T Consensus 92 ~~~~~vLDiG~G~G~~~~~l~~~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~-~~~~~~~fD~v~~~~~l 168 (254)
T 1xtp_A 92 HGTSRALDCGAGIGRITKNLLTKLY--ATTDLLEPVKHMLEEAKRELAGMPVGKFILASMET-ATLPPNTYDLIVIQWTA 168 (254)
T ss_dssp CCCSEEEEETCTTTHHHHHTHHHHC--SEEEEEESCHHHHHHHHHHTTTSSEEEEEESCGGG-CCCCSSCEEEEEEESCG
T ss_pred cCCCEEEEECCCcCHHHHHHHHhhc--CEEEEEeCCHHHHHHHHHHhccCCceEEEEccHHH-CCCCCCCeEEEEEcchh
Confidence 3446899999999999998865431 122233433 5555555552 111 2223322 33223799999999888
Q ss_pred cccccCCCCCChhhHHhhhhhcccCCceEEEecCh----------------HHHHHHHhhhhcCCceEEEe
Q 039518 540 SHYKNRGEVCSLEDIMLEMDLIIRPQGFIIIRDEK----------------SLITRIRDLAPKFLWDVELH 594 (617)
Q Consensus 540 s~~~~~~~~c~~~~~l~e~dRilRP~G~~i~~d~~----------------~~~~~~~~~~~~~~W~~~~~ 594 (617)
.++ .. -....+|-|+-|+|+|||++++.+.. ...++++++++.--++....
T Consensus 169 ~~~---~~-~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~ 235 (254)
T 1xtp_A 169 IYL---TD-ADFVKFFKHCQQALTPNGYIFFKENCSTGDRFLVDKEDSSLTRSDIHYKRLFNESGVRVVKE 235 (254)
T ss_dssp GGS---CH-HHHHHHHHHHHHHEEEEEEEEEEEEBC--CCEEEETTTTEEEBCHHHHHHHHHHHTCCEEEE
T ss_pred hhC---CH-HHHHHHHHHHHHhcCCCeEEEEEecCCCcccceecccCCcccCCHHHHHHHHHHCCCEEEEe
Confidence 754 11 13568899999999999999998631 12366777777777776544
No 281
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=98.00 E-value=4.7e-06 Score=84.62 Aligned_cols=99 Identities=19% Similarity=0.319 Sum_probs=66.8
Q ss_pred cCCCCCeeeEEeccccccchhhhccCC-CeEEEEeccCCCC-chhHHHHhh----cc---ccc-ccccCCCCCCCCCccc
Q 039518 462 NVNETEIRNAMDMNAYCGGFAVALNSL-PVWVMNIVPISMK-NTLSAIYNR----GI---LGA-FHDWCEPFSTYPRTYD 531 (617)
Q Consensus 462 ~~~~~~~Rn~mDm~~~~g~faa~l~~~-~v~vmnv~p~~~~-~~l~~~~~R----Gl---ig~-~~~~~~~f~typrtyD 531 (617)
.+..+ .+|||+|||.|.++..|... +. +|+-.|-. ..+..+-++ |+ +-+ ..|..+ ++.-+.+||
T Consensus 79 ~~~~~--~~vLDiGcG~G~~~~~l~~~~~~---~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~fD 152 (297)
T 2o57_A 79 VLQRQ--AKGLDLGAGYGGAARFLVRKFGV---SIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLE-IPCEDNSYD 152 (297)
T ss_dssp CCCTT--CEEEEETCTTSHHHHHHHHHHCC---EEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTS-CSSCTTCEE
T ss_pred CCCCC--CEEEEeCCCCCHHHHHHHHHhCC---EEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEcCccc-CCCCCCCEe
Confidence 34444 58999999999999988765 43 33333443 555555443 43 212 223322 232137999
Q ss_pred hhhccccccccccCCCCCChhhHHhhhhhcccCCceEEEec
Q 039518 532 LLHANHLFSHYKNRGEVCSLEDIMLEMDLIIRPQGFIIIRD 572 (617)
Q Consensus 532 l~H~~~~~s~~~~~~~~c~~~~~l~e~dRilRP~G~~i~~d 572 (617)
+|.+.+++.++ .+ ...+|-|+-|+|||||.+++.+
T Consensus 153 ~v~~~~~l~~~---~~---~~~~l~~~~~~LkpgG~l~~~~ 187 (297)
T 2o57_A 153 FIWSQDAFLHS---PD---KLKVFQECARVLKPRGVMAITD 187 (297)
T ss_dssp EEEEESCGGGC---SC---HHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEEecchhhhc---CC---HHHHHHHHHHHcCCCeEEEEEE
Confidence 99999998876 33 6789999999999999999974
No 282
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=98.00 E-value=0.0001 Score=78.55 Aligned_cols=97 Identities=9% Similarity=0.042 Sum_probs=57.4
Q ss_pred eeEEeccccccchhhhccCC--CeEEEEeccCCCC-chhHHH----Hhhcccc------cccccCCCCCCCCCccchhhc
Q 039518 469 RNAMDMNAYCGGFAVALNSL--PVWVMNIVPISMK-NTLSAI----YNRGILG------AFHDWCEPFSTYPRTYDLLHA 535 (617)
Q Consensus 469 Rn~mDm~~~~g~faa~l~~~--~v~vmnv~p~~~~-~~l~~~----~~RGlig------~~~~~~~~f~typrtyDl~H~ 535 (617)
.+|||+|||.|.|+.+|... ..-|.. .|.. ..+..+ -+.|+-. ...|..+.++ +.+||+|-+
T Consensus 224 ~~VLDlGcG~G~~s~~la~~~p~~~V~g---vD~s~~al~~Ar~n~~~ngl~~~~~v~~~~~D~~~~~~--~~~fD~Ii~ 298 (375)
T 4dcm_A 224 GEIVDLGCGNGVIGLTLLDKNPQAKVVF---VDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVE--PFRFNAVLC 298 (375)
T ss_dssp SEEEEETCTTCHHHHHHHHHCTTCEEEE---EESCHHHHHHHHHHHHHHCGGGGGGEEEEECSTTTTCC--TTCEEEEEE
T ss_pred CeEEEEeCcchHHHHHHHHHCCCCEEEE---EECcHHHHHHHHHHHHHcCCCcCceEEEEechhhccCC--CCCeeEEEE
Confidence 68999999999999888654 222222 2222 223222 2334321 2333334333 379999998
Q ss_pred cccccccccCCCCCChhhHHhhhhhcccCCceEEEe
Q 039518 536 NHLFSHYKNRGEVCSLEDIMLEMDLIIRPQGFIIIR 571 (617)
Q Consensus 536 ~~~~s~~~~~~~~c~~~~~l~e~dRilRP~G~~i~~ 571 (617)
+..|..- ....+-....++-++-|+|+|||.+++.
T Consensus 299 nppfh~~-~~~~~~~~~~~l~~~~~~LkpgG~l~iv 333 (375)
T 4dcm_A 299 NPPFHQQ-HALTDNVAWEMFHHARRCLKINGELYIV 333 (375)
T ss_dssp CCCC--------CCHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCCcccC-cccCHHHHHHHHHHHHHhCCCCcEEEEE
Confidence 8777521 0011222336789999999999999995
No 283
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=97.99 E-value=4.4e-06 Score=80.57 Aligned_cols=102 Identities=14% Similarity=0.278 Sum_probs=70.6
Q ss_pred CCCCCeeeEEeccccccchhhhccCCCeEEEEeccCCCC-chhHHHHhhc----ccccc-cccCCCCCCCCCccchhhcc
Q 039518 463 VNETEIRNAMDMNAYCGGFAVALNSLPVWVMNIVPISMK-NTLSAIYNRG----ILGAF-HDWCEPFSTYPRTYDLLHAN 536 (617)
Q Consensus 463 ~~~~~~Rn~mDm~~~~g~faa~l~~~~v~vmnv~p~~~~-~~l~~~~~RG----lig~~-~~~~~~f~typrtyDl~H~~ 536 (617)
+....-.+|||+|||.|.++.+|.... .+|+-.|-. ..+..+-++. -+-++ .|.. .++ -+.+||+|.+.
T Consensus 47 ~~~~~~~~vLDiGcG~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~-~~~-~~~~fD~v~~~ 121 (216)
T 3ofk_A 47 LSSGAVSNGLEIGCAAGAFTEKLAPHC---KRLTVIDVMPRAIGRACQRTKRWSHISWAATDIL-QFS-TAELFDLIVVA 121 (216)
T ss_dssp TTTSSEEEEEEECCTTSHHHHHHGGGE---EEEEEEESCHHHHHHHHHHTTTCSSEEEEECCTT-TCC-CSCCEEEEEEE
T ss_pred cccCCCCcEEEEcCCCCHHHHHHHHcC---CEEEEEECCHHHHHHHHHhcccCCCeEEEEcchh-hCC-CCCCccEEEEc
Confidence 445556899999999999999998774 255555655 5666665553 12222 2222 233 25899999999
Q ss_pred ccccccccCCCCCChhhHHhhhhhcccCCceEEEec
Q 039518 537 HLFSHYKNRGEVCSLEDIMLEMDLIIRPQGFIIIRD 572 (617)
Q Consensus 537 ~~~s~~~~~~~~c~~~~~l~e~dRilRP~G~~i~~d 572 (617)
+++.+. .+.-.+..+|-|+-|+|+|||.+++.+
T Consensus 122 ~~l~~~---~~~~~~~~~l~~~~~~L~pgG~l~~~~ 154 (216)
T 3ofk_A 122 EVLYYL---EDMTQMRTAIDNMVKMLAPGGHLVFGS 154 (216)
T ss_dssp SCGGGS---SSHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred cHHHhC---CCHHHHHHHHHHHHHHcCCCCEEEEEe
Confidence 888865 332334567999999999999999963
No 284
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=97.99 E-value=1.8e-06 Score=85.10 Aligned_cols=93 Identities=13% Similarity=0.166 Sum_probs=65.7
Q ss_pred eeEEeccccccchhhhccCCCeEEEEeccCCCC-chhHHHHhhcccccccccCC---CCCCCCCccchhhcccccccccc
Q 039518 469 RNAMDMNAYCGGFAVALNSLPVWVMNIVPISMK-NTLSAIYNRGILGAFHDWCE---PFSTYPRTYDLLHANHLFSHYKN 544 (617)
Q Consensus 469 Rn~mDm~~~~g~faa~l~~~~v~vmnv~p~~~~-~~l~~~~~RGlig~~~~~~~---~f~typrtyDl~H~~~~~s~~~~ 544 (617)
.+|||+|||.|.++.+|.+...= |+-.|-. ..+..+-++ +--+..|..+ +|+ +.+||+|.+.+++.+.
T Consensus 43 ~~vLDiGcG~G~~~~~l~~~~~~---v~gvD~s~~~~~~a~~~-~~~~~~d~~~~~~~~~--~~~fD~i~~~~~l~~~-- 114 (240)
T 3dli_A 43 RRVLDIGCGRGEFLELCKEEGIE---SIGVDINEDMIKFCEGK-FNVVKSDAIEYLKSLP--DKYLDGVMISHFVEHL-- 114 (240)
T ss_dssp SCEEEETCTTTHHHHHHHHHTCC---EEEECSCHHHHHHHHTT-SEEECSCHHHHHHTSC--TTCBSEEEEESCGGGS--
T ss_pred CeEEEEeCCCCHHHHHHHhCCCc---EEEEECCHHHHHHHHhh-cceeeccHHHHhhhcC--CCCeeEEEECCchhhC--
Confidence 58999999999999988765442 2333444 667777666 2111122222 333 3899999999998864
Q ss_pred CCCCCChhhHHhhhhhcccCCceEEEe
Q 039518 545 RGEVCSLEDIMLEMDLIIRPQGFIIIR 571 (617)
Q Consensus 545 ~~~~c~~~~~l~e~dRilRP~G~~i~~ 571 (617)
..-.+..+|-|+-|+|+|||++++.
T Consensus 115 --~~~~~~~~l~~~~~~LkpgG~l~~~ 139 (240)
T 3dli_A 115 --DPERLFELLSLCYSKMKYSSYIVIE 139 (240)
T ss_dssp --CGGGHHHHHHHHHHHBCTTCCEEEE
T ss_pred --CcHHHHHHHHHHHHHcCCCcEEEEE
Confidence 2234568999999999999999997
No 285
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=97.99 E-value=5.2e-06 Score=80.95 Aligned_cols=115 Identities=10% Similarity=0.104 Sum_probs=72.5
Q ss_pred hhHHHHHHHHHHhcc--CCCCCeeeEEeccccccchhhhccCCCeEEEEeccCCCC-chhHHHHhhc--ccccccccCCC
Q 039518 448 SFWQDQVRHYWQLMN--VNETEIRNAMDMNAYCGGFAVALNSLPVWVMNIVPISMK-NTLSAIYNRG--ILGAFHDWCEP 522 (617)
Q Consensus 448 ~~w~~~v~~y~~~~~--~~~~~~Rn~mDm~~~~g~faa~l~~~~v~vmnv~p~~~~-~~l~~~~~RG--lig~~~~~~~~ 522 (617)
..|...++.+.+.+. +. .-.+|||+|||.|.++..|.+..- +|.-.|.. ..+..+-++. +--+..|..+
T Consensus 21 ~~~~~~~~~~~~~l~~~~~--~~~~vLdiG~G~G~~~~~l~~~~~---~v~~~D~s~~~~~~a~~~~~~~~~~~~d~~~- 94 (239)
T 3bxo_A 21 KDYAAEASDIADLVRSRTP--EASSLLDVACGTGTHLEHFTKEFG---DTAGLELSEDMLTHARKRLPDATLHQGDMRD- 94 (239)
T ss_dssp CCHHHHHHHHHHHHHHHCT--TCCEEEEETCTTSHHHHHHHHHHS---EEEEEESCHHHHHHHHHHCTTCEEEECCTTT-
T ss_pred hhHHHHHHHHHHHHHHhcC--CCCeEEEecccCCHHHHHHHHhCC---cEEEEeCCHHHHHHHHHhCCCCEEEECCHHH-
Confidence 455555555555544 32 236899999999999998876532 33334444 5666665552 2112223322
Q ss_pred CCCCCCccchhhc-cccccccccCCCCCChhhHHhhhhhcccCCceEEEec
Q 039518 523 FSTYPRTYDLLHA-NHLFSHYKNRGEVCSLEDIMLEMDLIIRPQGFIIIRD 572 (617)
Q Consensus 523 f~typrtyDl~H~-~~~~s~~~~~~~~c~~~~~l~e~dRilRP~G~~i~~d 572 (617)
++. +.+||+|.+ .+++.+. .+.-....+|-++-|+|+|||.+++.+
T Consensus 95 ~~~-~~~~D~v~~~~~~~~~~---~~~~~~~~~l~~~~~~L~pgG~l~~~~ 141 (239)
T 3bxo_A 95 FRL-GRKFSAVVSMFSSVGYL---KTTEELGAAVASFAEHLEPGGVVVVEP 141 (239)
T ss_dssp CCC-SSCEEEEEECTTGGGGC---CSHHHHHHHHHHHHHTEEEEEEEEECC
T ss_pred ccc-CCCCcEEEEcCchHhhc---CCHHHHHHHHHHHHHhcCCCeEEEEEe
Confidence 332 689999994 4466643 222345688999999999999999973
No 286
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=97.98 E-value=5.3e-06 Score=77.65 Aligned_cols=125 Identities=14% Similarity=0.135 Sum_probs=75.5
Q ss_pred HHhccCCCCCeeeEEeccccccchhhhccCCCeEEEEeccCCCC-chhHHHHhh----cc-----cccccccCCCCCCCC
Q 039518 458 WQLMNVNETEIRNAMDMNAYCGGFAVALNSLPVWVMNIVPISMK-NTLSAIYNR----GI-----LGAFHDWCEPFSTYP 527 (617)
Q Consensus 458 ~~~~~~~~~~~Rn~mDm~~~~g~faa~l~~~~v~vmnv~p~~~~-~~l~~~~~R----Gl-----ig~~~~~~~~f~typ 527 (617)
.+.+.+..+ .+|||+|||.|.++.++..... +|.-.|.. ..+..+-++ |+ --+..|+.+.++ +
T Consensus 45 ~~~~~~~~~--~~vLdiG~G~G~~~~~~~~~~~---~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~--~ 117 (194)
T 1dus_A 45 VENVVVDKD--DDILDLGCGYGVIGIALADEVK---STTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYENVK--D 117 (194)
T ss_dssp HHHCCCCTT--CEEEEETCTTSHHHHHHGGGSS---EEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTTTCT--T
T ss_pred HHHcccCCC--CeEEEeCCCCCHHHHHHHHcCC---eEEEEECCHHHHHHHHHHHHHcCCCccceEEEECchhcccc--c
Confidence 333444433 5899999999999988877633 23333433 444444443 43 223345555444 5
Q ss_pred CccchhhccccccccccCCCCCChhhHHhhhhhcccCCceEEEecCh-HHHHHHHhhhhcCCceEEEe
Q 039518 528 RTYDLLHANHLFSHYKNRGEVCSLEDIMLEMDLIIRPQGFIIIRDEK-SLITRIRDLAPKFLWDVELH 594 (617)
Q Consensus 528 rtyDl~H~~~~~s~~~~~~~~c~~~~~l~e~dRilRP~G~~i~~d~~-~~~~~~~~~~~~~~W~~~~~ 594 (617)
.+||+|.++..|.. ..-.+..++-++-|+|+|||.+++.+.. ....++.+..+..-+++...
T Consensus 118 ~~~D~v~~~~~~~~-----~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~l~~~~~~~~~~ 180 (194)
T 1dus_A 118 RKYNKIITNPPIRA-----GKEVLHRIIEEGKELLKDNGEIWVVIQTKQGAKSLAKYMKDVFGNVETV 180 (194)
T ss_dssp SCEEEEEECCCSTT-----CHHHHHHHHHHHHHHEEEEEEEEEEEESTHHHHHHHHHHHHHHSCCEEE
T ss_pred CCceEEEECCCccc-----chhHHHHHHHHHHHHcCCCCEEEEEECCCCChHHHHHHHHHHhcceEEE
Confidence 79999998776541 1123457899999999999999997543 23333444444433344443
No 287
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=97.98 E-value=2.7e-06 Score=82.97 Aligned_cols=92 Identities=17% Similarity=0.309 Sum_probs=64.4
Q ss_pred eEEeccccccchhhhccCCCeEEEEeccCCCC-chhHHHHhh---cccccccccCCCCCCCCCccchhhccccccccccC
Q 039518 470 NAMDMNAYCGGFAVALNSLPVWVMNIVPISMK-NTLSAIYNR---GILGAFHDWCEPFSTYPRTYDLLHANHLFSHYKNR 545 (617)
Q Consensus 470 n~mDm~~~~g~faa~l~~~~v~vmnv~p~~~~-~~l~~~~~R---Glig~~~~~~~~f~typrtyDl~H~~~~~s~~~~~ 545 (617)
+|||+|||.|.++..|.+..- +|+-.|-. ..+..+-++ ++--+..|..+.+ .+.+||+|++.+++.+.
T Consensus 45 ~vLDiGcG~G~~~~~l~~~~~---~v~gvD~s~~~~~~a~~~~~~~v~~~~~d~~~~~--~~~~fD~v~~~~~l~~~--- 116 (250)
T 2p7i_A 45 NLLELGSFKGDFTSRLQEHFN---DITCVEASEEAISHAQGRLKDGITYIHSRFEDAQ--LPRRYDNIVLTHVLEHI--- 116 (250)
T ss_dssp CEEEESCTTSHHHHHHTTTCS---CEEEEESCHHHHHHHHHHSCSCEEEEESCGGGCC--CSSCEEEEEEESCGGGC---
T ss_pred cEEEECCCCCHHHHHHHHhCC---cEEEEeCCHHHHHHHHHhhhCCeEEEEccHHHcC--cCCcccEEEEhhHHHhh---
Confidence 599999999999999976542 23333443 555555555 3222222333332 25899999999999865
Q ss_pred CCCCChhhHHhhhh-hcccCCceEEEec
Q 039518 546 GEVCSLEDIMLEMD-LIIRPQGFIIIRD 572 (617)
Q Consensus 546 ~~~c~~~~~l~e~d-RilRP~G~~i~~d 572 (617)
. +...+|-|+- |+|+|||++++.+
T Consensus 117 ~---~~~~~l~~~~~~~LkpgG~l~i~~ 141 (250)
T 2p7i_A 117 D---DPVALLKRINDDWLAEGGRLFLVC 141 (250)
T ss_dssp S---SHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred c---CHHHHHHHHHHHhcCCCCEEEEEc
Confidence 2 3468999999 9999999999974
No 288
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=97.98 E-value=1.6e-06 Score=92.83 Aligned_cols=145 Identities=9% Similarity=0.089 Sum_probs=99.4
Q ss_pred cccccchhhHHHHHHHHHHhcc--CCCCCeeeEEeccccccchhhhccCCCeEEEEeccCCCC-chhHHHHhhccccccc
Q 039518 441 EEFTTDTSFWQDQVRHYWQLMN--VNETEIRNAMDMNAYCGGFAVALNSLPVWVMNIVPISMK-NTLSAIYNRGILGAFH 517 (617)
Q Consensus 441 ~~f~~d~~~w~~~v~~y~~~~~--~~~~~~Rn~mDm~~~~g~faa~l~~~~v~vmnv~p~~~~-~~l~~~~~RGlig~~~ 517 (617)
..|...+..|.+....+.+.+- +....=.+|||+|||.|.++.+|.+... +|+-.|-. +.+..+-++|+-....
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~VLDiGcG~G~~~~~l~~~g~---~v~gvD~s~~~~~~a~~~~~~~~~~ 155 (416)
T 4e2x_A 79 PYHSSGSSVMREHFAMLARDFLATELTGPDPFIVEIGCNDGIMLRTIQEAGV---RHLGFEPSSGVAAKAREKGIRVRTD 155 (416)
T ss_dssp CCCGGGCHHHHHHHHHHHHHHHHTTTCSSSCEEEEETCTTTTTHHHHHHTTC---EEEEECCCHHHHHHHHTTTCCEECS
T ss_pred cCcCcCCHHHHHHHHHHHHHHHHHhCCCCCCEEEEecCCCCHHHHHHHHcCC---cEEEECCCHHHHHHHHHcCCCccee
Confidence 3344566778888777665442 3333346899999999999999988765 44444555 7888888887533221
Q ss_pred ccCC----CCCCC-CCccchhhccccccccccCCCCCChhhHHhhhhhcccCCceEEEecCh------------------
Q 039518 518 DWCE----PFSTY-PRTYDLLHANHLFSHYKNRGEVCSLEDIMLEMDLIIRPQGFIIIRDEK------------------ 574 (617)
Q Consensus 518 ~~~~----~f~ty-prtyDl~H~~~~~s~~~~~~~~c~~~~~l~e~dRilRP~G~~i~~d~~------------------ 574 (617)
.+.. .++ + +.+||+|.+.++|.+. . +...+|-|+-|+|+|||.+++....
T Consensus 156 ~~~~~~~~~l~-~~~~~fD~I~~~~vl~h~---~---d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~ 228 (416)
T 4e2x_A 156 FFEKATADDVR-RTEGPANVIYAANTLCHI---P---YVQSVLEGVDALLAPDGVFVFEDPYLGDIVAKTSFDQIFDEHF 228 (416)
T ss_dssp CCSHHHHHHHH-HHHCCEEEEEEESCGGGC---T---THHHHHHHHHHHEEEEEEEEEEEECHHHHHHHTCGGGCSTTCC
T ss_pred eechhhHhhcc-cCCCCEEEEEECChHHhc---C---CHHHHHHHHHHHcCCCeEEEEEeCChHHhhhhcchhhhhhhhh
Confidence 1111 111 2 3899999999999976 2 5789999999999999999997321
Q ss_pred --HHHHHHHhhhhcCCceEEEee
Q 039518 575 --SLITRIRDLAPKFLWDVELHS 595 (617)
Q Consensus 575 --~~~~~~~~~~~~~~W~~~~~~ 595 (617)
-..+.++++++.--+++....
T Consensus 229 ~~~s~~~l~~ll~~aGf~~~~~~ 251 (416)
T 4e2x_A 229 FLFSATSVQGMAQRCGFELVDVQ 251 (416)
T ss_dssp EECCHHHHHHHHHHTTEEEEEEE
T ss_pred hcCCHHHHHHHHHHcCCEEEEEE
Confidence 112567777777777765443
No 289
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=97.98 E-value=1.9e-05 Score=83.85 Aligned_cols=92 Identities=15% Similarity=0.156 Sum_probs=66.4
Q ss_pred CCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHh----CC-CcEEEEecCCCCC--CCC-----------
Q 039518 229 VFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALER----GI-GAMISALSTKQLP--YPS----------- 290 (617)
Q Consensus 229 g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~er----g~-~~~~~~~d~~~Lp--f~d----------- 290 (617)
+.+|||+|||+|.++..|++... .+.++|+++.+++.|+++ ++ ++.+..+|+.++. +..
T Consensus 214 ~~~vLDl~cG~G~~~l~la~~~~---~V~gvd~~~~ai~~a~~n~~~ng~~~v~~~~~d~~~~~~~~~~~~~~~~l~~~~ 290 (369)
T 3bt7_A 214 KGDLLELYCGNGNFSLALARNFD---RVLATEIAKPSVAAAQYNIAANHIDNVQIIRMAAEEFTQAMNGVREFNRLQGID 290 (369)
T ss_dssp CSEEEEESCTTSHHHHHHGGGSS---EEEEECCCHHHHHHHHHHHHHTTCCSEEEECCCSHHHHHHHSSCCCCTTGGGSC
T ss_pred CCEEEEccCCCCHHHHHHHhcCC---EEEEEECCHHHHHHHHHHHHHcCCCceEEEECCHHHHHHHHhhccccccccccc
Confidence 35699999999999999987543 678889999999988765 44 5778877765431 111
Q ss_pred ---CCeeEEEecccccccccchHHHHHHHHHhccCCeEEEEEe
Q 039518 291 ---SSFEMVHCSRCRVDWHANDGILLKEVDRVLRPNGYFVYSA 330 (617)
Q Consensus 291 ---~sFDlV~~s~~l~h~~~d~~~~L~el~RvLrPGG~Liis~ 330 (617)
.+||+|++.--. ..+..++.+.|+++|.+++..
T Consensus 291 ~~~~~fD~Vv~dPPr-------~g~~~~~~~~l~~~g~ivyvs 326 (369)
T 3bt7_A 291 LKSYQCETIFVDPPR-------SGLDSETEKMVQAYPRILYIS 326 (369)
T ss_dssp GGGCCEEEEEECCCT-------TCCCHHHHHHHTTSSEEEEEE
T ss_pred cccCCCCEEEECcCc-------cccHHHHHHHHhCCCEEEEEE
Confidence 379999864211 123456777788888888765
No 290
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=97.98 E-value=1.7e-05 Score=77.61 Aligned_cols=118 Identities=14% Similarity=0.078 Sum_probs=79.5
Q ss_pred eeEEeccccccchhhhccCCCeEEEEeccCCCC-chhHHHHhh----cccc----cccccCCCCCCCCCccchhhccccc
Q 039518 469 RNAMDMNAYCGGFAVALNSLPVWVMNIVPISMK-NTLSAIYNR----GILG----AFHDWCEPFSTYPRTYDLLHANHLF 539 (617)
Q Consensus 469 Rn~mDm~~~~g~faa~l~~~~v~vmnv~p~~~~-~~l~~~~~R----Glig----~~~~~~~~f~typrtyDl~H~~~~~ 539 (617)
.+|||+|||.|.++.+|.....-|.. .|-. ..+..+-++ |+.. +..|..+. + .+.+||+|.+..+|
T Consensus 68 ~~vLDiGcG~G~~~~~l~~~~~~v~g---vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~-~~~~fD~v~~~~~l 142 (235)
T 3lcc_A 68 GRALVPGCGGGHDVVAMASPERFVVG---LDISESALAKANETYGSSPKAEYFSFVKEDVFTW-R-PTELFDLIFDYVFF 142 (235)
T ss_dssp EEEEEETCTTCHHHHHHCBTTEEEEE---ECSCHHHHHHHHHHHTTSGGGGGEEEECCCTTTC-C-CSSCEEEEEEESST
T ss_pred CCEEEeCCCCCHHHHHHHhCCCeEEE---EECCHHHHHHHHHHhhccCCCcceEEEECchhcC-C-CCCCeeEEEEChhh
Confidence 48999999999999999876554333 3443 445444444 2222 12233332 2 23699999998888
Q ss_pred cccccCCCCCChhhHHhhhhhcccCCceEEEecCh-----------HHHHHHHhhhhcCCceEEEee
Q 039518 540 SHYKNRGEVCSLEDIMLEMDLIIRPQGFIIIRDEK-----------SLITRIRDLAPKFLWDVELHS 595 (617)
Q Consensus 540 s~~~~~~~~c~~~~~l~e~dRilRP~G~~i~~d~~-----------~~~~~~~~~~~~~~W~~~~~~ 595 (617)
.+. ..-....+|-++-|+|+|||++++.+.. -..++++++++.--|+.....
T Consensus 143 ~~~----~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~ 205 (235)
T 3lcc_A 143 CAI----EPEMRPAWAKSMYELLKPDGELITLMYPITDHVGGPPYKVDVSTFEEVLVPIGFKAVSVE 205 (235)
T ss_dssp TTS----CGGGHHHHHHHHHHHEEEEEEEEEEECCCSCCCSCSSCCCCHHHHHHHHGGGTEEEEEEE
T ss_pred hcC----CHHHHHHHHHHHHHHCCCCcEEEEEEecccccCCCCCccCCHHHHHHHHHHcCCeEEEEE
Confidence 754 2335568999999999999999985321 135678888888888876543
No 291
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=97.97 E-value=1e-05 Score=78.06 Aligned_cols=139 Identities=12% Similarity=0.065 Sum_probs=87.4
Q ss_pred HhccCCCCCeeeEEeccccccchhhhccCCC---eEEEEeccCCCC-chhHHHHhh----ccc---ccccccCCCCCCCC
Q 039518 459 QLMNVNETEIRNAMDMNAYCGGFAVALNSLP---VWVMNIVPISMK-NTLSAIYNR----GIL---GAFHDWCEPFSTYP 527 (617)
Q Consensus 459 ~~~~~~~~~~Rn~mDm~~~~g~faa~l~~~~---v~vmnv~p~~~~-~~l~~~~~R----Gli---g~~~~~~~~f~typ 527 (617)
+.+++..+ .+|||+|||.|.++.+|...- .-|.- .|.. ..+..+-++ |+- -+..|.. .++.-.
T Consensus 31 ~~~~~~~~--~~vLDiG~G~G~~~~~l~~~~~~~~~v~~---vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~-~~~~~~ 104 (219)
T 3dh0_A 31 KEFGLKEG--MTVLDVGTGAGFYLPYLSKMVGEKGKVYA---IDVQEEMVNYAWEKVNKLGLKNVEVLKSEEN-KIPLPD 104 (219)
T ss_dssp HHHTCCTT--CEEEESSCTTCTTHHHHHHHHTTTCEEEE---EESCHHHHHHHHHHHHHHTCTTEEEEECBTT-BCSSCS
T ss_pred HHhCCCCC--CEEEEEecCCCHHHHHHHHHhCCCcEEEE---EECCHHHHHHHHHHHHHcCCCcEEEEecccc-cCCCCC
Confidence 33445544 589999999999999886432 22222 2332 444444433 321 1222332 223223
Q ss_pred CccchhhccccccccccCCCCCChhhHHhhhhhcccCCceEEEecCh-------------HHHHHHHhhhhcCCceEEEe
Q 039518 528 RTYDLLHANHLFSHYKNRGEVCSLEDIMLEMDLIIRPQGFIIIRDEK-------------SLITRIRDLAPKFLWDVELH 594 (617)
Q Consensus 528 rtyDl~H~~~~~s~~~~~~~~c~~~~~l~e~dRilRP~G~~i~~d~~-------------~~~~~~~~~~~~~~W~~~~~ 594 (617)
.+||+|.+..++.++ . +...+|-|+-|+|+|||.+++.+.. -..++++++++.-.++....
T Consensus 105 ~~fD~v~~~~~l~~~---~---~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~ 178 (219)
T 3dh0_A 105 NTVDFIFMAFTFHEL---S---EPLKFLEELKRVAKPFAYLAIIDWKKEERDKGPPPEEVYSEWEVGLILEDAGIRVGRV 178 (219)
T ss_dssp SCEEEEEEESCGGGC---S---SHHHHHHHHHHHEEEEEEEEEEEECSSCCSSSCCGGGSCCHHHHHHHHHHTTCEEEEE
T ss_pred CCeeEEEeehhhhhc---C---CHHHHHHHHHHHhCCCeEEEEEEecccccccCCchhcccCHHHHHHHHHHCCCEEEEE
Confidence 789999999988865 2 3578999999999999999997421 12567888888888886554
Q ss_pred eccccCCCceeEEEEEec
Q 039518 595 SLENREKKMESVLICRKK 612 (617)
Q Consensus 595 ~~e~~~~~~~~~l~~~k~ 612 (617)
..-. ....+++++|+
T Consensus 179 ~~~~---~~~~~~~~~k~ 193 (219)
T 3dh0_A 179 VEVG---KYCFGVYAMIV 193 (219)
T ss_dssp EEET---TTEEEEEEECC
T ss_pred EeeC---CceEEEEEEec
Confidence 3211 23567777775
No 292
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=97.96 E-value=5.6e-06 Score=88.62 Aligned_cols=97 Identities=13% Similarity=0.043 Sum_probs=71.8
Q ss_pred CCCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHh-------------------CCC-cEEEEecCCCCC
Q 039518 228 GVFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALER-------------------GIG-AMISALSTKQLP 287 (617)
Q Consensus 228 ~g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~er-------------------g~~-~~~~~~d~~~Lp 287 (617)
++.+|||+|||+|.++..++.+.. ...+.++|+++.+++.++++ ++. +.+..+|+..+.
T Consensus 47 ~~~~VLDl~aGtG~~~l~~a~~~~-~~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl~~i~v~~~Da~~~~ 125 (378)
T 2dul_A 47 NPKIVLDALSATGIRGIRFALETP-AEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEKTIVINHDDANRLM 125 (378)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHSS-CSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSSEEEEEESCHHHHH
T ss_pred CCCEEEECCCchhHHHHHHHHhCC-CCeEEEEECCHHHHHHHHHHHHHhcccccccccccccccCCCceEEEcCcHHHHH
Confidence 356799999999999999988621 12578899999999888764 443 667777764432
Q ss_pred C-CCCCeeEEEecccccccccchHHHHHHHHHhccCCeEEEEEe
Q 039518 288 Y-PSSSFEMVHCSRCRVDWHANDGILLKEVDRVLRPNGYFVYSA 330 (617)
Q Consensus 288 f-~d~sFDlV~~s~~l~h~~~d~~~~L~el~RvLrPGG~Liis~ 330 (617)
. ..+.||+|+.. +.. ....++..+.+.|+|||.++++.
T Consensus 126 ~~~~~~fD~I~lD----P~~-~~~~~l~~a~~~lk~gG~l~vt~ 164 (378)
T 2dul_A 126 AERHRYFHFIDLD----PFG-SPMEFLDTALRSAKRRGILGVTA 164 (378)
T ss_dssp HHSTTCEEEEEEC----CSS-CCHHHHHHHHHHEEEEEEEEEEE
T ss_pred HhccCCCCEEEeC----CCC-CHHHHHHHHHHhcCCCCEEEEEe
Confidence 1 13579999943 222 34678999999999999988875
No 293
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=97.96 E-value=6.7e-06 Score=81.11 Aligned_cols=105 Identities=11% Similarity=0.245 Sum_probs=70.6
Q ss_pred HHHHhccCCCCCeeeEEeccccccchhhhccCCCeEEEEeccCCCC-chhHHHHh----hcc--cc-cccccCCCCCCCC
Q 039518 456 HYWQLMNVNETEIRNAMDMNAYCGGFAVALNSLPVWVMNIVPISMK-NTLSAIYN----RGI--LG-AFHDWCEPFSTYP 527 (617)
Q Consensus 456 ~y~~~~~~~~~~~Rn~mDm~~~~g~faa~l~~~~v~vmnv~p~~~~-~~l~~~~~----RGl--ig-~~~~~~~~f~typ 527 (617)
.+.+.+++..+ .+|||+|||.|.++.+|.+..- +|+-.|-. ..+..+-+ +|+ +- +..|. +.++.-+
T Consensus 12 ~~~~~~~~~~~--~~vLDiGcG~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~-~~~~~~~ 85 (239)
T 1xxl_A 12 LMIKTAECRAE--HRVLDIGAGAGHTALAFSPYVQ---ECIGVDATKEMVEVASSFAQEKGVENVRFQQGTA-ESLPFPD 85 (239)
T ss_dssp HHHHHHTCCTT--CEEEEESCTTSHHHHHHGGGSS---EEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBT-TBCCSCT
T ss_pred hHHHHhCcCCC--CEEEEEccCcCHHHHHHHHhCC---EEEEEECCHHHHHHHHHHHHHcCCCCeEEEeccc-ccCCCCC
Confidence 34555556555 5899999999999998876542 33444443 44444433 243 22 22233 3344223
Q ss_pred CccchhhccccccccccCCCCCChhhHHhhhhhcccCCceEEEec
Q 039518 528 RTYDLLHANHLFSHYKNRGEVCSLEDIMLEMDLIIRPQGFIIIRD 572 (617)
Q Consensus 528 rtyDl~H~~~~~s~~~~~~~~c~~~~~l~e~dRilRP~G~~i~~d 572 (617)
.+||+|.+..++.++ . +...+|-|+-|+|||||++++.+
T Consensus 86 ~~fD~v~~~~~l~~~---~---~~~~~l~~~~~~LkpgG~l~~~~ 124 (239)
T 1xxl_A 86 DSFDIITCRYAAHHF---S---DVRKAVREVARVLKQDGRFLLVD 124 (239)
T ss_dssp TCEEEEEEESCGGGC---S---CHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CcEEEEEECCchhhc---c---CHHHHHHHHHHHcCCCcEEEEEE
Confidence 899999999888765 2 46789999999999999999964
No 294
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=97.95 E-value=1.4e-05 Score=81.67 Aligned_cols=82 Identities=11% Similarity=0.087 Sum_probs=63.5
Q ss_pred HHHHHHHhhhhhccCCcccCCCCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHhC--CCcEEEEecCCC
Q 039518 208 EYIQRLGNMMTNETGNLRSAGVFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALERG--IGAMISALSTKQ 285 (617)
Q Consensus 208 ~Y~~~L~~~L~~~~~~lr~~~g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~erg--~~~~~~~~d~~~ 285 (617)
...+.|.+.+.. .++ +|||||||+|.++..|++++. .++++|+++.+++.++++. .++.+..+|+..
T Consensus 34 ~i~~~Iv~~~~~-------~~~-~VLEIG~G~G~lt~~L~~~~~---~V~avEid~~~~~~l~~~~~~~~v~vi~~D~l~ 102 (271)
T 3fut_A 34 AHLRRIVEAARP-------FTG-PVFEVGPGLGALTRALLEAGA---EVTAIEKDLRLRPVLEETLSGLPVRLVFQDALL 102 (271)
T ss_dssp HHHHHHHHHHCC-------CCS-CEEEECCTTSHHHHHHHHTTC---CEEEEESCGGGHHHHHHHTTTSSEEEEESCGGG
T ss_pred HHHHHHHHhcCC-------CCC-eEEEEeCchHHHHHHHHHcCC---EEEEEECCHHHHHHHHHhcCCCCEEEEECChhh
Confidence 455555555422 345 699999999999999999874 5778899999999998873 358889999988
Q ss_pred CCCCCC-CeeEEEecc
Q 039518 286 LPYPSS-SFEMVHCSR 300 (617)
Q Consensus 286 Lpf~d~-sFDlV~~s~ 300 (617)
+++++. .||.|+++.
T Consensus 103 ~~~~~~~~~~~iv~Nl 118 (271)
T 3fut_A 103 YPWEEVPQGSLLVANL 118 (271)
T ss_dssp SCGGGSCTTEEEEEEE
T ss_pred CChhhccCccEEEecC
Confidence 887643 689998764
No 295
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=97.95 E-value=5.1e-06 Score=83.04 Aligned_cols=104 Identities=22% Similarity=0.333 Sum_probs=67.5
Q ss_pred HHHhccCCCCCeeeEEeccccccchhhhccCC-CeEEEEeccCCCC-chhHHHHhh----ccc---c-cccccCCCCCCC
Q 039518 457 YWQLMNVNETEIRNAMDMNAYCGGFAVALNSL-PVWVMNIVPISMK-NTLSAIYNR----GIL---G-AFHDWCEPFSTY 526 (617)
Q Consensus 457 y~~~~~~~~~~~Rn~mDm~~~~g~faa~l~~~-~v~vmnv~p~~~~-~~l~~~~~R----Gli---g-~~~~~~~~f~ty 526 (617)
..+.+++..+ .+|||+|||.|.++..|... +. +|+-.|-. ..+..+-++ |+- - +..|..+ ++.-
T Consensus 53 l~~~~~~~~~--~~vLDiGcG~G~~~~~l~~~~~~---~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~-~~~~ 126 (273)
T 3bus_A 53 MIALLDVRSG--DRVLDVGCGIGKPAVRLATARDV---RVTGISISRPQVNQANARATAAGLANRVTFSYADAMD-LPFE 126 (273)
T ss_dssp HHHHSCCCTT--CEEEEESCTTSHHHHHHHHHSCC---EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTS-CCSC
T ss_pred HHHhcCCCCC--CEEEEeCCCCCHHHHHHHHhcCC---EEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECcccc-CCCC
Confidence 3444445544 58999999999999888652 33 22333333 455554443 542 1 2223322 2211
Q ss_pred CCccchhhccccccccccCCCCCChhhHHhhhhhcccCCceEEEec
Q 039518 527 PRTYDLLHANHLFSHYKNRGEVCSLEDIMLEMDLIIRPQGFIIIRD 572 (617)
Q Consensus 527 prtyDl~H~~~~~s~~~~~~~~c~~~~~l~e~dRilRP~G~~i~~d 572 (617)
+.+||+|.+.++|.+. . +...+|-|+-|+|+|||.+++.+
T Consensus 127 ~~~fD~v~~~~~l~~~---~---~~~~~l~~~~~~L~pgG~l~i~~ 166 (273)
T 3bus_A 127 DASFDAVWALESLHHM---P---DRGRALREMARVLRPGGTVAIAD 166 (273)
T ss_dssp TTCEEEEEEESCTTTS---S---CHHHHHHHHHTTEEEEEEEEEEE
T ss_pred CCCccEEEEechhhhC---C---CHHHHHHHHHHHcCCCeEEEEEE
Confidence 3799999999888865 2 24789999999999999999975
No 296
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=97.93 E-value=1.9e-05 Score=75.61 Aligned_cols=151 Identities=11% Similarity=0.037 Sum_probs=84.5
Q ss_pred ccchhhHHHHHHHHHHhccCCCCCeeeEEeccccccchhhhccCC-CeEEEEeccCCCC-chhHHHHh----hcc--ccc
Q 039518 444 TTDTSFWQDQVRHYWQLMNVNETEIRNAMDMNAYCGGFAVALNSL-PVWVMNIVPISMK-NTLSAIYN----RGI--LGA 515 (617)
Q Consensus 444 ~~d~~~w~~~v~~y~~~~~~~~~~~Rn~mDm~~~~g~faa~l~~~-~v~vmnv~p~~~~-~~l~~~~~----RGl--ig~ 515 (617)
..+++.|.+.+-......+.-.+ .+|||+|||.|.++.+|... |-. +|+-.|.. ..+..+-+ .|+ +-+
T Consensus 44 ~~~~~~~~~~~~~~l~~~~~~~~--~~vLDiG~G~G~~~~~l~~~~~~~--~v~~vD~s~~~~~~a~~~~~~~~~~~v~~ 119 (207)
T 1jsx_A 44 RDPNEMLVRHILDSIVVAPYLQG--ERFIDVGTGPGLPGIPLSIVRPEA--HFTLLDSLGKRVRFLRQVQHELKLENIEP 119 (207)
T ss_dssp ----CHHHHHHHHHHHHGGGCCS--SEEEEETCTTTTTHHHHHHHCTTS--EEEEEESCHHHHHHHHHHHHHTTCSSEEE
T ss_pred CCHHHHHHHHHHhhhhhhhhcCC--CeEEEECCCCCHHHHHHHHHCCCC--EEEEEeCCHHHHHHHHHHHHHcCCCCeEE
Confidence 34455565555444332221122 47999999999998888642 211 22222332 33333333 244 222
Q ss_pred c-cccCCCCCCCCCccchhhccccccccccCCCCCChhhHHhhhhhcccCCceEEEecChHHHHHHHhhhhcCCceEEEe
Q 039518 516 F-HDWCEPFSTYPRTYDLLHANHLFSHYKNRGEVCSLEDIMLEMDLIIRPQGFIIIRDEKSLITRIRDLAPKFLWDVELH 594 (617)
Q Consensus 516 ~-~~~~~~f~typrtyDl~H~~~~~s~~~~~~~~c~~~~~l~e~dRilRP~G~~i~~d~~~~~~~~~~~~~~~~W~~~~~ 594 (617)
+ .|+.+..+ +.+||+|.+..+ ..+..++-++-|+|+|||++++......-++++++.+ .|+....
T Consensus 120 ~~~d~~~~~~--~~~~D~i~~~~~----------~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~--g~~~~~~ 185 (207)
T 1jsx_A 120 VQSRVEEFPS--EPPFDGVISRAF----------ASLNDMVSWCHHLPGEQGRFYALKGQMPEDEIALLPE--EYQVESV 185 (207)
T ss_dssp EECCTTTSCC--CSCEEEEECSCS----------SSHHHHHHHHTTSEEEEEEEEEEESSCCHHHHHTSCT--TEEEEEE
T ss_pred EecchhhCCc--cCCcCEEEEecc----------CCHHHHHHHHHHhcCCCcEEEEEeCCCchHHHHHHhc--CCceeee
Confidence 2 23333221 378999986432 2356899999999999999999866555667777776 6775432
Q ss_pred e--ccccCCCceeEEEEEec
Q 039518 595 S--LENREKKMESVLICRKK 612 (617)
Q Consensus 595 ~--~e~~~~~~~~~l~~~k~ 612 (617)
. .-....+...++++.|+
T Consensus 186 ~~~~~~~~~~~~~~~~~~k~ 205 (207)
T 1jsx_A 186 VKLQVPALDGERHLVVIKAN 205 (207)
T ss_dssp EEEECC--CCEEEEEEEEEC
T ss_pred eeeccCCCCCceEEEEEEec
Confidence 1 12222344677777764
No 297
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=97.93 E-value=8.8e-06 Score=77.40 Aligned_cols=143 Identities=10% Similarity=0.065 Sum_probs=88.6
Q ss_pred CCCCCeeeEEeccccccchhhhccCC--CeEEEEeccCCCC-chhHHHHhh----cc---cccc-cccCCCCC-CCCCcc
Q 039518 463 VNETEIRNAMDMNAYCGGFAVALNSL--PVWVMNIVPISMK-NTLSAIYNR----GI---LGAF-HDWCEPFS-TYPRTY 530 (617)
Q Consensus 463 ~~~~~~Rn~mDm~~~~g~faa~l~~~--~v~vmnv~p~~~~-~~l~~~~~R----Gl---ig~~-~~~~~~f~-typrty 530 (617)
+..+ .+|||+|||.|.++.+|.+. +-- +|+-.|-. ..+..+-++ |+ +-+. .|. +.++ ..+.+|
T Consensus 20 ~~~~--~~vLDlGcG~G~~~~~l~~~~~~~~--~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~-~~~~~~~~~~f 94 (197)
T 3eey_A 20 VKEG--DTVVDATCGNGNDTAFLASLVGENG--RVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGH-QNMDKYIDCPV 94 (197)
T ss_dssp CCTT--CEEEESCCTTSHHHHHHHHHHCTTC--EEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCG-GGGGGTCCSCE
T ss_pred CCCC--CEEEEcCCCCCHHHHHHHHHhCCCC--EEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCH-HHHhhhccCCc
Confidence 5555 48999999999999888654 211 23334444 455554443 33 2222 222 2233 234899
Q ss_pred chhhccccccccccCCCCC------ChhhHHhhhhhcccCCceEEEec------ChHHHHHHHhhhhcC---CceEEEee
Q 039518 531 DLLHANHLFSHYKNRGEVC------SLEDIMLEMDLIIRPQGFIIIRD------EKSLITRIRDLAPKF---LWDVELHS 595 (617)
Q Consensus 531 Dl~H~~~~~s~~~~~~~~c------~~~~~l~e~dRilRP~G~~i~~d------~~~~~~~~~~~~~~~---~W~~~~~~ 595 (617)
|+|-++..+-.. .+.. ....++-++-|+|+|||.+++.. ..+..+.+.+.++.+ .|++...+
T Consensus 95 D~v~~~~~~~~~---~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~v~~~~ 171 (197)
T 3eey_A 95 KAVMFNLGYLPS---GDHSISTRPETTIQALSKAMELLVTGGIITVVIYYGGDTGFEEKEKVLEFLKGVDQKKFIVQRTD 171 (197)
T ss_dssp EEEEEEESBCTT---SCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEEECCBTTTBSHHHHHHHHHHTTSCTTTEEEEEEE
T ss_pred eEEEEcCCcccC---cccccccCcccHHHHHHHHHHhCcCCCEEEEEEccCCCCcHHHHHHHHHHHHhCCCCcEEEEEEE
Confidence 999987655100 1111 12368999999999999999874 223455566666555 48888777
Q ss_pred ccccCCCceeEEEEEecc
Q 039518 596 LENREKKMESVLICRKKF 613 (617)
Q Consensus 596 ~e~~~~~~~~~l~~~k~~ 613 (617)
.-+....+..++|.+|..
T Consensus 172 ~~~~~~~pp~~~~~~~~~ 189 (197)
T 3eey_A 172 FINQANCPPILVCIEKIS 189 (197)
T ss_dssp ETTCCSCCCEEEEEEECC
T ss_pred eccCccCCCeEEEEEEcc
Confidence 666666777888888864
No 298
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=97.92 E-value=4.3e-06 Score=80.24 Aligned_cols=95 Identities=14% Similarity=0.214 Sum_probs=66.3
Q ss_pred eeEEeccccccchhhhccCCCeEEEEeccCCCC-chhHHHHhhcccc---cccccCCCCCCCCCccchhhcccccccccc
Q 039518 469 RNAMDMNAYCGGFAVALNSLPVWVMNIVPISMK-NTLSAIYNRGILG---AFHDWCEPFSTYPRTYDLLHANHLFSHYKN 544 (617)
Q Consensus 469 Rn~mDm~~~~g~faa~l~~~~v~vmnv~p~~~~-~~l~~~~~RGlig---~~~~~~~~f~typrtyDl~H~~~~~s~~~~ 544 (617)
.+|||+|||.|.++.+|..... +|+-.|-. ..+..+-++|+.. +..|..+.++ +.+||+|.+..++.+.
T Consensus 48 ~~vLdiG~G~G~~~~~l~~~~~---~v~~~D~s~~~~~~a~~~~~~~~~~~~~d~~~~~~--~~~~D~v~~~~~l~~~-- 120 (218)
T 3ou2_A 48 GDVLELASGTGYWTRHLSGLAD---RVTALDGSAEMIAEAGRHGLDNVEFRQQDLFDWTP--DRQWDAVFFAHWLAHV-- 120 (218)
T ss_dssp SEEEEESCTTSHHHHHHHHHSS---EEEEEESCHHHHHHHGGGCCTTEEEEECCTTSCCC--SSCEEEEEEESCGGGS--
T ss_pred CeEEEECCCCCHHHHHHHhcCC---eEEEEeCCHHHHHHHHhcCCCCeEEEecccccCCC--CCceeEEEEechhhcC--
Confidence 3899999999999999976643 33333443 5666666666322 2223333222 4899999999988864
Q ss_pred CCCCCChhhHHhhhhhcccCCceEEEec
Q 039518 545 RGEVCSLEDIMLEMDLIIRPQGFIIIRD 572 (617)
Q Consensus 545 ~~~~c~~~~~l~e~dRilRP~G~~i~~d 572 (617)
. .-.+..+|-|+-|+|+|||.+++.+
T Consensus 121 -~-~~~~~~~l~~~~~~L~pgG~l~~~~ 146 (218)
T 3ou2_A 121 -P-DDRFEAFWESVRSAVAPGGVVEFVD 146 (218)
T ss_dssp -C-HHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred -C-HHHHHHHHHHHHHHcCCCeEEEEEe
Confidence 2 1224689999999999999999974
No 299
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=97.92 E-value=1.2e-05 Score=76.95 Aligned_cols=116 Identities=17% Similarity=0.270 Sum_probs=75.8
Q ss_pred eeEEeccccccchhhhccCCCeEEEEeccCCCC-chhHHHHhh----cccccccccCCCCCCCCCccchhhccccccccc
Q 039518 469 RNAMDMNAYCGGFAVALNSLPVWVMNIVPISMK-NTLSAIYNR----GILGAFHDWCEPFSTYPRTYDLLHANHLFSHYK 543 (617)
Q Consensus 469 Rn~mDm~~~~g~faa~l~~~~v~vmnv~p~~~~-~~l~~~~~R----Glig~~~~~~~~f~typrtyDl~H~~~~~s~~~ 543 (617)
.+|||+|||.|.++.+|...+. .+|+-.|.. ..+..+-++ |+-.+----...+...+.+||+|.++..+..
T Consensus 62 ~~vLDiG~G~G~~~~~l~~~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~fD~i~~~~~~~~-- 137 (205)
T 3grz_A 62 LTVADVGTGSGILAIAAHKLGA--KSVLATDISDESMTAAEENAALNGIYDIALQKTSLLADVDGKFDLIVANILAEI-- 137 (205)
T ss_dssp CEEEEETCTTSHHHHHHHHTTC--SEEEEEESCHHHHHHHHHHHHHTTCCCCEEEESSTTTTCCSCEEEEEEESCHHH--
T ss_pred CEEEEECCCCCHHHHHHHHCCC--CEEEEEECCHHHHHHHHHHHHHcCCCceEEEeccccccCCCCceEEEECCcHHH--
Confidence 5899999999999999877653 123333433 444444443 4422111111222223589999998776653
Q ss_pred cCCCCCChhhHHhhhhhcccCCceEEEec-ChHHHHHHHhhhhcCCceEEEee
Q 039518 544 NRGEVCSLEDIMLEMDLIIRPQGFIIIRD-EKSLITRIRDLAPKFLWDVELHS 595 (617)
Q Consensus 544 ~~~~~c~~~~~l~e~dRilRP~G~~i~~d-~~~~~~~~~~~~~~~~W~~~~~~ 595 (617)
+..+|-++-|+|+|||.+++.+ .....+.+.+++....++.....
T Consensus 138 -------~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~Gf~~~~~~ 183 (205)
T 3grz_A 138 -------LLDLIPQLDSHLNEDGQVIFSGIDYLQLPKIEQALAENSFQIDLKM 183 (205)
T ss_dssp -------HHHHGGGSGGGEEEEEEEEEEEEEGGGHHHHHHHHHHTTEEEEEEE
T ss_pred -------HHHHHHHHHHhcCCCCEEEEEecCcccHHHHHHHHHHcCCceEEee
Confidence 3578999999999999999974 33446677777777777765543
No 300
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=97.92 E-value=6.4e-06 Score=83.26 Aligned_cols=116 Identities=13% Similarity=0.226 Sum_probs=74.4
Q ss_pred eeEEeccccccchhhhccCCCeEEEEeccCCCC-chhHHHHh----hcc-cc-cccccCCCCCCCCCccchhhccccccc
Q 039518 469 RNAMDMNAYCGGFAVALNSLPVWVMNIVPISMK-NTLSAIYN----RGI-LG-AFHDWCEPFSTYPRTYDLLHANHLFSH 541 (617)
Q Consensus 469 Rn~mDm~~~~g~faa~l~~~~v~vmnv~p~~~~-~~l~~~~~----RGl-ig-~~~~~~~~f~typrtyDl~H~~~~~s~ 541 (617)
..|||+|||.|.++.+|..... +|+-.|-. ..+..+-+ .|+ +- +..|..+ ++. +.+||+|.+..+|.+
T Consensus 122 ~~vLD~GcG~G~~~~~l~~~g~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~-~~~-~~~fD~i~~~~~~~~ 196 (286)
T 3m70_A 122 CKVLDLGCGQGRNSLYLSLLGY---DVTSWDHNENSIAFLNETKEKENLNISTALYDINA-ANI-QENYDFIVSTVVFMF 196 (286)
T ss_dssp CEEEEESCTTCHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCGGG-CCC-CSCEEEEEECSSGGG
T ss_pred CcEEEECCCCCHHHHHHHHCCC---eEEEEECCHHHHHHHHHHHHHcCCceEEEEecccc-ccc-cCCccEEEEccchhh
Confidence 5799999999999999987754 33334443 44444333 243 11 1123222 222 689999999998875
Q ss_pred cccCCCCCChhhHHhhhhhcccCCceEEEecC--------------hHHHHHHHhhhhcCCceEEEee
Q 039518 542 YKNRGEVCSLEDIMLEMDLIIRPQGFIIIRDE--------------KSLITRIRDLAPKFLWDVELHS 595 (617)
Q Consensus 542 ~~~~~~~c~~~~~l~e~dRilRP~G~~i~~d~--------------~~~~~~~~~~~~~~~W~~~~~~ 595 (617)
. +.-.+..+|-++-|+|+|||.+++-.. .-.-++++++... |++....
T Consensus 197 ~----~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~~~~ 258 (286)
T 3m70_A 197 L----NRERVPSIIKNMKEHTNVGGYNLIVAAMSTDDVPCPLPFSFTFAENELKEYYKD--WEFLEYN 258 (286)
T ss_dssp S----CGGGHHHHHHHHHHTEEEEEEEEEEEEBCCSSSCCSSCCSCCBCTTHHHHHTTT--SEEEEEE
T ss_pred C----CHHHHHHHHHHHHHhcCCCcEEEEEEecCCCCCCCCCCccccCCHHHHHHHhcC--CEEEEEE
Confidence 3 334566899999999999999777411 0113456666665 8876654
No 301
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=97.90 E-value=7.1e-06 Score=81.13 Aligned_cols=103 Identities=15% Similarity=0.209 Sum_probs=68.3
Q ss_pred HHHhcc-CCCCCeeeEEeccccccchhhhccCC-CeEEEEeccCCCC-chhHHHHhh----cccc----cccccCCCCCC
Q 039518 457 YWQLMN-VNETEIRNAMDMNAYCGGFAVALNSL-PVWVMNIVPISMK-NTLSAIYNR----GILG----AFHDWCEPFST 525 (617)
Q Consensus 457 y~~~~~-~~~~~~Rn~mDm~~~~g~faa~l~~~-~v~vmnv~p~~~~-~~l~~~~~R----Glig----~~~~~~~~f~t 525 (617)
..+.+. +..+ .+|||+|||.|.++..|... +. .|+-.|-. ..+..+-++ |+-. +..|. +.++.
T Consensus 37 ~l~~l~~~~~~--~~vLDiG~G~G~~~~~l~~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~-~~~~~ 110 (257)
T 3f4k_A 37 AVSFINELTDD--AKIADIGCGTGGQTLFLADYVKG---QITGIDLFPDFIEIFNENAVKANCADRVKGITGSM-DNLPF 110 (257)
T ss_dssp HHTTSCCCCTT--CEEEEETCTTSHHHHHHHHHCCS---EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCT-TSCSS
T ss_pred HHHHHhcCCCC--CeEEEeCCCCCHHHHHHHHhCCC---eEEEEECCHHHHHHHHHHHHHcCCCCceEEEECCh-hhCCC
Confidence 344442 4444 48999999999999888654 22 23333433 455554433 4322 23344 33442
Q ss_pred CCCccchhhccccccccccCCCCCChhhHHhhhhhcccCCceEEEec
Q 039518 526 YPRTYDLLHANHLFSHYKNRGEVCSLEDIMLEMDLIIRPQGFIIIRD 572 (617)
Q Consensus 526 yprtyDl~H~~~~~s~~~~~~~~c~~~~~l~e~dRilRP~G~~i~~d 572 (617)
-+.+||+|++.+++.+. ....+|-|+-|+|||||++++.+
T Consensus 111 ~~~~fD~v~~~~~l~~~-------~~~~~l~~~~~~L~pgG~l~~~~ 150 (257)
T 3f4k_A 111 QNEELDLIWSEGAIYNI-------GFERGMNEWSKYLKKGGFIAVSE 150 (257)
T ss_dssp CTTCEEEEEEESCSCCC-------CHHHHHHHHHTTEEEEEEEEEEE
T ss_pred CCCCEEEEEecChHhhc-------CHHHHHHHHHHHcCCCcEEEEEE
Confidence 23899999999888742 46789999999999999999985
No 302
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=97.90 E-value=3.1e-05 Score=76.52 Aligned_cols=155 Identities=12% Similarity=0.125 Sum_probs=88.4
Q ss_pred cchhhHHHHHHHHHHhcc-CCCCCeeeEEeccccccchhhhcc--CCCeEEEEeccCCCC-chhHHHHh----hcc--cc
Q 039518 445 TDTSFWQDQVRHYWQLMN-VNETEIRNAMDMNAYCGGFAVALN--SLPVWVMNIVPISMK-NTLSAIYN----RGI--LG 514 (617)
Q Consensus 445 ~d~~~w~~~v~~y~~~~~-~~~~~~Rn~mDm~~~~g~faa~l~--~~~v~vmnv~p~~~~-~~l~~~~~----RGl--ig 514 (617)
...+.|.+.+-.....+. +....-.+|||+|||.|.++..|. ....-|.-| |.. ..+.++-+ .|+ +-
T Consensus 47 ~~~~~~~~~~~d~l~~~~~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~v---D~s~~~~~~a~~~~~~~~~~~v~ 123 (240)
T 1xdz_A 47 EKKEVYLKHFYDSITAAFYVDFNQVNTICDVGAGAGFPSLPIKICFPHLHVTIV---DSLNKRITFLEKLSEALQLENTT 123 (240)
T ss_dssp SHHHHHHHTHHHHHGGGGTSCGGGCCEEEEECSSSCTTHHHHHHHCTTCEEEEE---ESCHHHHHHHHHHHHHHTCSSEE
T ss_pred CHHHHHHHHHHHHHhHHHhcccCCCCEEEEecCCCCHHHHHHHHhCCCCEEEEE---eCCHHHHHHHHHHHHHcCCCCEE
Confidence 344566655544333222 211223589999999998887776 333333333 332 33333322 354 33
Q ss_pred cccccCCCCC---CCCCccchhhccccccccccCCCCCChhhHHhhhhhcccCCceEEEec---ChHHHHHHHhhhhcCC
Q 039518 515 AFHDWCEPFS---TYPRTYDLLHANHLFSHYKNRGEVCSLEDIMLEMDLIIRPQGFIIIRD---EKSLITRIRDLAPKFL 588 (617)
Q Consensus 515 ~~~~~~~~f~---typrtyDl~H~~~~~s~~~~~~~~c~~~~~l~e~dRilRP~G~~i~~d---~~~~~~~~~~~~~~~~ 588 (617)
+++.=.+.++ ..+.+||+|.+..+ ..+..++-++-|+|+|||.+++.+ ..+.+.++.+.++...
T Consensus 124 ~~~~d~~~~~~~~~~~~~fD~V~~~~~----------~~~~~~l~~~~~~LkpgG~l~~~~g~~~~~~~~~~~~~l~~~g 193 (240)
T 1xdz_A 124 FCHDRAETFGQRKDVRESYDIVTARAV----------ARLSVLSELCLPLVKKNGLFVALKAASAEEELNAGKKAITTLG 193 (240)
T ss_dssp EEESCHHHHTTCTTTTTCEEEEEEECC----------SCHHHHHHHHGGGEEEEEEEEEEECC-CHHHHHHHHHHHHHTT
T ss_pred EEeccHHHhcccccccCCccEEEEecc----------CCHHHHHHHHHHhcCCCCEEEEEeCCCchHHHHHHHHHHHHcC
Confidence 3332112222 12478999997552 236689999999999999999874 3455666777777777
Q ss_pred ceEEEeec--cccCCCceeEEEEEec
Q 039518 589 WDVELHSL--ENREKKMESVLICRKK 612 (617)
Q Consensus 589 W~~~~~~~--e~~~~~~~~~l~~~k~ 612 (617)
++...... -........+++.+|.
T Consensus 194 ~~~~~~~~~~~~~~~~~~~l~~~~k~ 219 (240)
T 1xdz_A 194 GELENIHSFKLPIEESDRNIMVIRKI 219 (240)
T ss_dssp EEEEEEEEEECTTTCCEEEEEEEEEC
T ss_pred CeEeEEEEEecCCCCCceEEEEEEec
Confidence 87644321 1111233456666665
No 303
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=97.89 E-value=8.2e-06 Score=78.47 Aligned_cols=118 Identities=13% Similarity=0.095 Sum_probs=80.5
Q ss_pred eeEEeccccccchhhhccCCCeEEEEeccCCCC-chhHHHHhh-cccccccccCCCCCCCCCccchhhccccccccccCC
Q 039518 469 RNAMDMNAYCGGFAVALNSLPVWVMNIVPISMK-NTLSAIYNR-GILGAFHDWCEPFSTYPRTYDLLHANHLFSHYKNRG 546 (617)
Q Consensus 469 Rn~mDm~~~~g~faa~l~~~~v~vmnv~p~~~~-~~l~~~~~R-Glig~~~~~~~~f~typrtyDl~H~~~~~s~~~~~~ 546 (617)
.+|||+|||.|.++..|.+... +|+-.|.. ..+..+-++ ++--...|.. .++ .+.+||+|.+..++.+.
T Consensus 45 ~~vLDiGcG~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~d~~-~~~-~~~~fD~v~~~~~l~~~---- 115 (211)
T 3e23_A 45 AKILELGCGAGYQAEAMLAAGF---DVDATDGSPELAAEASRRLGRPVRTMLFH-QLD-AIDAYDAVWAHACLLHV---- 115 (211)
T ss_dssp CEEEESSCTTSHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHTSCCEECCGG-GCC-CCSCEEEEEECSCGGGS----
T ss_pred CcEEEECCCCCHHHHHHHHcCC---eEEEECCCHHHHHHHHHhcCCceEEeeec-cCC-CCCcEEEEEecCchhhc----
Confidence 5899999999999999987754 33334444 566666666 4322233332 233 35899999999888754
Q ss_pred CCCChhhHHhhhhhcccCCceEEEecCh---------------HHHHHHHhhhhcCC-ceEEEee
Q 039518 547 EVCSLEDIMLEMDLIIRPQGFIIIRDEK---------------SLITRIRDLAPKFL-WDVELHS 595 (617)
Q Consensus 547 ~~c~~~~~l~e~dRilRP~G~~i~~d~~---------------~~~~~~~~~~~~~~-W~~~~~~ 595 (617)
..-....+|-|+-|+|+|||++++.... -..+.++++++.-- ++.....
T Consensus 116 ~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aG~f~~~~~~ 180 (211)
T 3e23_A 116 PRDELADVLKLIWRALKPGGLFYASYKSGEGEGRDKLARYYNYPSEEWLRARYAEAGTWASVAVE 180 (211)
T ss_dssp CHHHHHHHHHHHHHHEEEEEEEEEEEECCSSCEECTTSCEECCCCHHHHHHHHHHHCCCSEEEEE
T ss_pred CHHHHHHHHHHHHHhcCCCcEEEEEEcCCCcccccccchhccCCCHHHHHHHHHhCCCcEEEEEE
Confidence 1224567999999999999999997211 13567777777776 7765543
No 304
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=97.88 E-value=1.1e-05 Score=77.75 Aligned_cols=97 Identities=12% Similarity=0.134 Sum_probs=67.1
Q ss_pred CeeeEEeccccccchhhhccCCCeEEEEeccCCCC-chhHHHHhhcccccccccCCCCCCCC-Cccchhhcccccccccc
Q 039518 467 EIRNAMDMNAYCGGFAVALNSLPVWVMNIVPISMK-NTLSAIYNRGILGAFHDWCEPFSTYP-RTYDLLHANHLFSHYKN 544 (617)
Q Consensus 467 ~~Rn~mDm~~~~g~faa~l~~~~v~vmnv~p~~~~-~~l~~~~~RGlig~~~~~~~~f~typ-rtyDl~H~~~~~s~~~~ 544 (617)
.-.+|||+|||.|.++.+|...+. +++-.|.. ..+..+-++.---+..|..+....+| .+||+|.+.+++.+.
T Consensus 32 ~~~~vLdiG~G~G~~~~~l~~~~~---~~~~~D~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~fD~v~~~~~l~~~-- 106 (230)
T 3cc8_A 32 EWKEVLDIGCSSGALGAAIKENGT---RVSGIEAFPEAAEQAKEKLDHVVLGDIETMDMPYEEEQFDCVIFGDVLEHL-- 106 (230)
T ss_dssp TCSEEEEETCTTSHHHHHHHTTTC---EEEEEESSHHHHHHHHTTSSEEEESCTTTCCCCSCTTCEEEEEEESCGGGS--
T ss_pred CCCcEEEeCCCCCHHHHHHHhcCC---eEEEEeCCHHHHHHHHHhCCcEEEcchhhcCCCCCCCccCEEEECChhhhc--
Confidence 346899999999999999988763 34444544 55555555542112223332112233 899999999988865
Q ss_pred CCCCCChhhHHhhhhhcccCCceEEEec
Q 039518 545 RGEVCSLEDIMLEMDLIIRPQGFIIIRD 572 (617)
Q Consensus 545 ~~~~c~~~~~l~e~dRilRP~G~~i~~d 572 (617)
. +...+|-|+-|+|+|||++++..
T Consensus 107 -~---~~~~~l~~~~~~L~~gG~l~~~~ 130 (230)
T 3cc8_A 107 -F---DPWAVIEKVKPYIKQNGVILASI 130 (230)
T ss_dssp -S---CHHHHHHHTGGGEEEEEEEEEEE
T ss_pred -C---CHHHHHHHHHHHcCCCCEEEEEe
Confidence 2 34689999999999999999973
No 305
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=97.88 E-value=8.4e-06 Score=81.13 Aligned_cols=95 Identities=13% Similarity=0.203 Sum_probs=65.3
Q ss_pred CeeeEEeccccccchhhhccCCCeEEEEeccCCCC-chhHHHHhh----ccc---ccccccCCCCCCCC-Cccchhhccc
Q 039518 467 EIRNAMDMNAYCGGFAVALNSLPVWVMNIVPISMK-NTLSAIYNR----GIL---GAFHDWCEPFSTYP-RTYDLLHANH 537 (617)
Q Consensus 467 ~~Rn~mDm~~~~g~faa~l~~~~v~vmnv~p~~~~-~~l~~~~~R----Gli---g~~~~~~~~f~typ-rtyDl~H~~~ 537 (617)
.-.+|||+|||.|.++..|....- .|+-.|.. ..+..+-++ |+- -+..|..+ ++ +| .+||+|.+..
T Consensus 37 ~~~~vLDiGcG~G~~~~~l~~~~~---~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~-l~-~~~~~fD~V~~~~ 111 (260)
T 1vl5_A 37 GNEEVLDVATGGGHVANAFAPFVK---KVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAEQ-MP-FTDERFHIVTCRI 111 (260)
T ss_dssp SCCEEEEETCTTCHHHHHHGGGSS---EEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC-C-CC-SCTTCEEEEEEES
T ss_pred CCCEEEEEeCCCCHHHHHHHHhCC---EEEEEeCCHHHHHHHHHHHHhcCCCceEEEEecHHh-CC-CCCCCEEEEEEhh
Confidence 346899999999999998876532 44444544 555555443 431 12223322 33 33 8999999998
Q ss_pred cccccccCCCCCChhhHHhhhhhcccCCceEEEec
Q 039518 538 LFSHYKNRGEVCSLEDIMLEMDLIIRPQGFIIIRD 572 (617)
Q Consensus 538 ~~s~~~~~~~~c~~~~~l~e~dRilRP~G~~i~~d 572 (617)
++.++ . +...+|-|+-|+|||||++++.+
T Consensus 112 ~l~~~---~---d~~~~l~~~~r~LkpgG~l~~~~ 140 (260)
T 1vl5_A 112 AAHHF---P---NPASFVSEAYRVLKKGGQLLLVD 140 (260)
T ss_dssp CGGGC---S---CHHHHHHHHHHHEEEEEEEEEEE
T ss_pred hhHhc---C---CHHHHHHHHHHHcCCCCEEEEEE
Confidence 88765 2 45689999999999999999963
No 306
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=97.87 E-value=7.2e-06 Score=80.21 Aligned_cols=116 Identities=11% Similarity=0.033 Sum_probs=79.0
Q ss_pred eeEEeccccccchhhhccCCCeEEEEeccCCCC-chhHHHHhhcc----cccccccCCCCCCCCCccchhhccccccccc
Q 039518 469 RNAMDMNAYCGGFAVALNSLPVWVMNIVPISMK-NTLSAIYNRGI----LGAFHDWCEPFSTYPRTYDLLHANHLFSHYK 543 (617)
Q Consensus 469 Rn~mDm~~~~g~faa~l~~~~v~vmnv~p~~~~-~~l~~~~~RGl----ig~~~~~~~~f~typrtyDl~H~~~~~s~~~ 543 (617)
.+|||+|||.|.++.+|.....- |+-.|-. ..+..+-+++. --+..|.. .++.-+.+||+|.+.+++.+.
T Consensus 55 ~~vLDiG~G~G~~~~~l~~~~~~---v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~-~~~~~~~~fD~v~~~~~l~~~- 129 (242)
T 3l8d_A 55 AEVLDVGCGDGYGTYKLSRTGYK---AVGVDISEVMIQKGKERGEGPDLSFIKGDLS-SLPFENEQFEAIMAINSLEWT- 129 (242)
T ss_dssp CEEEEETCTTSHHHHHHHHTTCE---EEEEESCHHHHHHHHTTTCBTTEEEEECBTT-BCSSCTTCEEEEEEESCTTSS-
T ss_pred CeEEEEcCCCCHHHHHHHHcCCe---EEEEECCHHHHHHHHhhcccCCceEEEcchh-cCCCCCCCccEEEEcChHhhc-
Confidence 48999999999999999877543 3333444 66777777642 11122222 233224899999999888854
Q ss_pred cCCCCCChhhHHhhhhhcccCCceEEEecCh----------------------HHHHHHHhhhhcCCceEEEe
Q 039518 544 NRGEVCSLEDIMLEMDLIIRPQGFIIIRDEK----------------------SLITRIRDLAPKFLWDVELH 594 (617)
Q Consensus 544 ~~~~~c~~~~~l~e~dRilRP~G~~i~~d~~----------------------~~~~~~~~~~~~~~W~~~~~ 594 (617)
. ....+|-|+-|+|+|||.+++.+.. -...++++++..--+++...
T Consensus 130 --~---~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~ 197 (242)
T 3l8d_A 130 --E---EPLRALNEIKRVLKSDGYACIAILGPTAKPRENSYPRLYGKDVVCNTMMPWEFEQLVKEQGFKVVDG 197 (242)
T ss_dssp --S---CHHHHHHHHHHHEEEEEEEEEEEECTTCGGGGGGGGGGGTCCCSSCCCCHHHHHHHHHHTTEEEEEE
T ss_pred --c---CHHHHHHHHHHHhCCCeEEEEEEcCCcchhhhhhhhhhccccccccCCCHHHHHHHHHHcCCEEEEe
Confidence 2 3468899999999999999997410 11246777777777776544
No 307
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=97.87 E-value=2.6e-05 Score=77.18 Aligned_cols=125 Identities=10% Similarity=0.070 Sum_probs=76.1
Q ss_pred CeeeEEeccccccchhhhccCCCeEEEEeccCCCC-chhHHHHhhc----------------------------------
Q 039518 467 EIRNAMDMNAYCGGFAVALNSLPVWVMNIVPISMK-NTLSAIYNRG---------------------------------- 511 (617)
Q Consensus 467 ~~Rn~mDm~~~~g~faa~l~~~~v~vmnv~p~~~~-~~l~~~~~RG---------------------------------- 511 (617)
.-.+|||+|||.|.++..|..... -+|+-.|-. ..+..+-++-
T Consensus 56 ~~~~vLDlGcG~G~~~~~l~~~~~--~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 133 (265)
T 2i62_A 56 KGELLIDIGSGPTIYQLLSACESF--TEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEKLR 133 (265)
T ss_dssp CEEEEEEESCTTCCGGGTTGGGTE--EEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHHHH
T ss_pred CCCEEEEECCCccHHHHHHhhccc--CeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHHHHhh
Confidence 347899999999999988876654 234444443 4444443221
Q ss_pred -cc--ccccccCCCCCCCC---CccchhhccccccccccCCCCCChhhHHhhhhhcccCCceEEEecCh-----------
Q 039518 512 -IL--GAFHDWCEPFSTYP---RTYDLLHANHLFSHYKNRGEVCSLEDIMLEMDLIIRPQGFIIIRDEK----------- 574 (617)
Q Consensus 512 -li--g~~~~~~~~f~typ---rtyDl~H~~~~~s~~~~~~~~c~~~~~l~e~dRilRP~G~~i~~d~~----------- 574 (617)
-+ -+..|..+.-+.-+ .+||+|.+..++.... .+.=....+|-|+-|+|+|||++|+.+..
T Consensus 134 ~~v~~~~~~d~~~~~~~~~~~~~~fD~v~~~~~l~~~~--~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~~~~~~~~~~ 211 (265)
T 2i62_A 134 RAIKQVLKCDVTQSQPLGGVSLPPADCLLSTLCLDAAC--PDLPAYRTALRNLGSLLKPGGFLVMVDALKSSYYMIGEQK 211 (265)
T ss_dssp HHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHC--SSHHHHHHHHHHHHTTEEEEEEEEEEEESSCCEEEETTEE
T ss_pred hhheeEEEeeeccCCCCCccccCCccEEEEhhhhhhhc--CChHHHHHHHHHHHhhCCCCcEEEEEecCCCceEEcCCcc
Confidence 02 11223333222123 7999999888876320 11113457899999999999999997521
Q ss_pred -----HHHHHHHhhhhcCCceEEEee
Q 039518 575 -----SLITRIRDLAPKFLWDVELHS 595 (617)
Q Consensus 575 -----~~~~~~~~~~~~~~W~~~~~~ 595 (617)
-..+.+.+++...-+++....
T Consensus 212 ~~~~~~~~~~~~~~l~~aGf~~~~~~ 237 (265)
T 2i62_A 212 FSSLPLGWETVRDAVEEAGYTIEQFE 237 (265)
T ss_dssp EECCCCCHHHHHHHHHHTTCEEEEEE
T ss_pred ccccccCHHHHHHHHHHCCCEEEEEE
Confidence 023467777777777665543
No 308
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=97.87 E-value=1.2e-05 Score=75.16 Aligned_cols=119 Identities=16% Similarity=0.168 Sum_probs=75.9
Q ss_pred ccCCCCCeeeEEeccccccchhhhccCCCeEEEEeccCCCC-chhHHHHh----hcc---c-ccccccCCCCCCCCCccc
Q 039518 461 MNVNETEIRNAMDMNAYCGGFAVALNSLPVWVMNIVPISMK-NTLSAIYN----RGI---L-GAFHDWCEPFSTYPRTYD 531 (617)
Q Consensus 461 ~~~~~~~~Rn~mDm~~~~g~faa~l~~~~v~vmnv~p~~~~-~~l~~~~~----RGl---i-g~~~~~~~~f~typrtyD 531 (617)
+.+..+ .+|||+|||.|.++..|...-. +|.-.|.. ..+..+-+ .|+ + -.-.|+.+.++.. .+||
T Consensus 29 ~~~~~~--~~vldiG~G~G~~~~~l~~~~~---~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~-~~~D 102 (192)
T 1l3i_A 29 AEPGKN--DVAVDVGCGTGGVTLELAGRVR---RVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPEALCKI-PDID 102 (192)
T ss_dssp HCCCTT--CEEEEESCTTSHHHHHHHTTSS---EEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHHHHTTS-CCEE
T ss_pred cCCCCC--CEEEEECCCCCHHHHHHHHhcC---EEEEEECCHHHHHHHHHHHHHcCCCcceEEEecCHHHhcccC-CCCC
Confidence 445554 5899999999999988876652 33333443 44444433 233 1 1123333333321 4799
Q ss_pred hhhccccccccccCCCCCChhhHHhhhhhcccCCceEEEec-ChHHHHHHHhhhhcCCceEEEe
Q 039518 532 LLHANHLFSHYKNRGEVCSLEDIMLEMDLIIRPQGFIIIRD-EKSLITRIRDLAPKFLWDVELH 594 (617)
Q Consensus 532 l~H~~~~~s~~~~~~~~c~~~~~l~e~dRilRP~G~~i~~d-~~~~~~~~~~~~~~~~W~~~~~ 594 (617)
+|-+++.+. .+..+|-++-|+|+|||.+++.+ ..+...++.++++...|++...
T Consensus 103 ~v~~~~~~~---------~~~~~l~~~~~~l~~gG~l~~~~~~~~~~~~~~~~l~~~g~~~~~~ 157 (192)
T 1l3i_A 103 IAVVGGSGG---------ELQEILRIIKDKLKPGGRIIVTAILLETKFEAMECLRDLGFDVNIT 157 (192)
T ss_dssp EEEESCCTT---------CHHHHHHHHHHTEEEEEEEEEEECBHHHHHHHHHHHHHTTCCCEEE
T ss_pred EEEECCchH---------HHHHHHHHHHHhcCCCcEEEEEecCcchHHHHHHHHHHCCCceEEE
Confidence 998766553 24688999999999999999975 3566677777777666655443
No 309
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=97.86 E-value=8.8e-05 Score=79.46 Aligned_cols=104 Identities=17% Similarity=0.255 Sum_probs=67.4
Q ss_pred CCeEEEECCCCcHHHHHhccC----------------CCcEEEeeecCCc-----------HHHHHHHHH-hC--CCcEE
Q 039518 229 VFQVLDVGCGVASFSAFLLPL----------------DIQTMSFAPKDGH-----------ENQIQFALE-RG--IGAMI 278 (617)
Q Consensus 229 g~rVLDIGCGtG~~a~~La~~----------------gv~~v~v~~iDis-----------~~~lq~A~e-rg--~~~~~ 278 (617)
..+|+|+||++|..+..+.+. ...-+.+...|+. +.+.+.+++ .| .+..+
T Consensus 53 ~~~IaDlGCssG~NT~~~v~~ii~~i~~~~~~~~~~~~~pe~~v~~nDLp~NDFN~lF~~L~~~~~~~~~~~g~~~~~~f 132 (384)
T 2efj_A 53 CFKVGDLGCASGPNTFSTVRDIVQSIDKVGQEKKNELERPTIQIFLNDLFQNDFNSVFKLLPSFYRNLEKENGRKIGSCL 132 (384)
T ss_dssp EEEEEEETCCSSHHHHHHHHHHHHHHTCC----------CEEEEEEECCTTSCHHHHHHHHHHHHHHHHHHTCCCTTSEE
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHHHHhhhcccCCCCCceEEEecCCCccchHHHHhhhhhhHhhhhhhccCCCCceE
Confidence 467999999999888776543 0123566667766 444443333 23 23445
Q ss_pred EEec---CCCCCCCCCCeeEEEecccccccccchH---------------------------------------HHHHHH
Q 039518 279 SALS---TKQLPYPSSSFEMVHCSRCRVDWHANDG---------------------------------------ILLKEV 316 (617)
Q Consensus 279 ~~~d---~~~Lpf~d~sFDlV~~s~~l~h~~~d~~---------------------------------------~~L~el 316 (617)
..+. ...-.||+++||+|+++.+ +||..+.. .+|+..
T Consensus 133 ~~gvpgSFy~rlfp~~S~d~v~Ss~a-LHWls~~p~~l~~~~s~~~nkg~i~i~~~sp~~v~~ay~~Qf~~D~~~FL~~R 211 (384)
T 2efj_A 133 IGAMPGSFYSRLFPEESMHFLHSCYC-LHWLSQVPSGLVTELGISVNKGCIYSSKASRPPIQKAYLDQFTKDFTTFLRIH 211 (384)
T ss_dssp EEECCSCTTSCCSCTTCEEEEEEESC-TTBCSSSCCC------CCCCTTCSSSCTTSCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEecchhhhhccCCCCceEEEEecce-eeecCCCchhhhccccccccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 4443 3344689999999999875 57753221 126666
Q ss_pred HHhccCCeEEEEEeCCC
Q 039518 317 DRVLRPNGYFVYSAPPA 333 (617)
Q Consensus 317 ~RvLrPGG~Liis~p~~ 333 (617)
++.|+|||.++++....
T Consensus 212 a~eL~pGG~mvl~~~gr 228 (384)
T 2efj_A 212 SEELISRGRMLLTFICK 228 (384)
T ss_dssp HHHEEEEEEEEEEEECC
T ss_pred HHHhccCCeEEEEEecC
Confidence 89999999999997643
No 310
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=97.86 E-value=1.2e-05 Score=79.47 Aligned_cols=94 Identities=12% Similarity=0.152 Sum_probs=65.4
Q ss_pred eeeEEeccccccchhhhccCCCeEEEEeccCCCC-chhHHHHhh--c----ccccccccCCCCCCCCCccchhhcccccc
Q 039518 468 IRNAMDMNAYCGGFAVALNSLPVWVMNIVPISMK-NTLSAIYNR--G----ILGAFHDWCEPFSTYPRTYDLLHANHLFS 540 (617)
Q Consensus 468 ~Rn~mDm~~~~g~faa~l~~~~v~vmnv~p~~~~-~~l~~~~~R--G----lig~~~~~~~~f~typrtyDl~H~~~~~s 540 (617)
-.+|||+|||.|.++..|.+... +|+-.|-. ..+..+-++ + +--+..|. +.++.-+.+||+|++..++.
T Consensus 40 ~~~vLDiG~G~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~-~~~~~~~~~fD~v~~~~~l~ 115 (263)
T 2yqz_A 40 EPVFLELGVGTGRIALPLIARGY---RYIALDADAAMLEVFRQKIAGVDRKVQVVQADA-RAIPLPDESVHGVIVVHLWH 115 (263)
T ss_dssp CCEEEEETCTTSTTHHHHHTTTC---EEEEEESCHHHHHHHHHHTTTSCTTEEEEESCT-TSCCSCTTCEEEEEEESCGG
T ss_pred CCEEEEeCCcCCHHHHHHHHCCC---EEEEEECCHHHHHHHHHHhhccCCceEEEEccc-ccCCCCCCCeeEEEECCchh
Confidence 36899999999999999987754 33333444 556666555 1 21222333 23332137999999988887
Q ss_pred ccccCCCCCChhhHHhhhhhcccCCceEEEe
Q 039518 541 HYKNRGEVCSLEDIMLEMDLIIRPQGFIIIR 571 (617)
Q Consensus 541 ~~~~~~~~c~~~~~l~e~dRilRP~G~~i~~ 571 (617)
+. . +...+|-|+-|+|+|||.+++.
T Consensus 116 ~~---~---~~~~~l~~~~~~L~pgG~l~~~ 140 (263)
T 2yqz_A 116 LV---P---DWPKVLAEAIRVLKPGGALLEG 140 (263)
T ss_dssp GC---T---THHHHHHHHHHHEEEEEEEEEE
T ss_pred hc---C---CHHHHHHHHHHHCCCCcEEEEE
Confidence 54 2 4678999999999999999985
No 311
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=97.85 E-value=4.7e-06 Score=82.43 Aligned_cols=96 Identities=16% Similarity=0.204 Sum_probs=66.2
Q ss_pred eeEEeccccccchhhhccCC-CeEEEEeccCCCC-chhHHHHhhc-----ccccccccCCCCCCCCCccchhhccccccc
Q 039518 469 RNAMDMNAYCGGFAVALNSL-PVWVMNIVPISMK-NTLSAIYNRG-----ILGAFHDWCEPFSTYPRTYDLLHANHLFSH 541 (617)
Q Consensus 469 Rn~mDm~~~~g~faa~l~~~-~v~vmnv~p~~~~-~~l~~~~~RG-----lig~~~~~~~~f~typrtyDl~H~~~~~s~ 541 (617)
.+|||+|||.|.++..|.+. .. +|+-.|-. ..+..+-++. +--+..|..+ ++.-+.+||+|++.+++.+
T Consensus 57 ~~vLdiG~G~G~~~~~l~~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~-~~~~~~~fD~v~~~~~l~~ 132 (266)
T 3ujc_A 57 SKVLDIGSGLGGGCMYINEKYGA---HTHGIDICSNIVNMANERVSGNNKIIFEANDILT-KEFPENNFDLIYSRDAILA 132 (266)
T ss_dssp CEEEEETCTTSHHHHHHHHHHCC---EEEEEESCHHHHHHHHHTCCSCTTEEEEECCTTT-CCCCTTCEEEEEEESCGGG
T ss_pred CEEEEECCCCCHHHHHHHHHcCC---EEEEEeCCHHHHHHHHHHhhcCCCeEEEECcccc-CCCCCCcEEEEeHHHHHHh
Confidence 58999999999999998765 33 23333443 5666666664 1112334433 2222489999999988875
Q ss_pred cccCCCCCChhhHHhhhhhcccCCceEEEec
Q 039518 542 YKNRGEVCSLEDIMLEMDLIIRPQGFIIIRD 572 (617)
Q Consensus 542 ~~~~~~~c~~~~~l~e~dRilRP~G~~i~~d 572 (617)
. ..-....+|-|+-|+|||||.+++.+
T Consensus 133 ~----~~~~~~~~l~~~~~~L~pgG~l~~~~ 159 (266)
T 3ujc_A 133 L----SLENKNKLFQKCYKWLKPTGTLLITD 159 (266)
T ss_dssp S----CHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred c----ChHHHHHHHHHHHHHcCCCCEEEEEE
Confidence 4 12345688999999999999999974
No 312
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=97.85 E-value=2.4e-05 Score=76.38 Aligned_cols=93 Identities=10% Similarity=0.168 Sum_probs=62.4
Q ss_pred eeEEeccccccchhhhccCCCeEEEEeccCCCC-chhHHHHhh----cc-cc-cccccCCCCCCCCCccchhhccc-ccc
Q 039518 469 RNAMDMNAYCGGFAVALNSLPVWVMNIVPISMK-NTLSAIYNR----GI-LG-AFHDWCEPFSTYPRTYDLLHANH-LFS 540 (617)
Q Consensus 469 Rn~mDm~~~~g~faa~l~~~~v~vmnv~p~~~~-~~l~~~~~R----Gl-ig-~~~~~~~~f~typrtyDl~H~~~-~~s 540 (617)
.+|||+|||.|.++..|... .+|+-.|-. ..+..+-++ |. +- +-.|..+ ++ .|.+||+|-+.. ++.
T Consensus 35 ~~vLdiG~G~G~~~~~l~~~----~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~-~~-~~~~fD~v~~~~~~~~ 108 (243)
T 3d2l_A 35 KRIADIGCGTGTATLLLADH----YEVTGVDLSEEMLEIAQEKAMETNRHVDFWVQDMRE-LE-LPEPVDAITILCDSLN 108 (243)
T ss_dssp CEEEEESCTTCHHHHHHTTT----SEEEEEESCHHHHHHHHHHHHHTTCCCEEEECCGGG-CC-CSSCEEEEEECTTGGG
T ss_pred CeEEEecCCCCHHHHHHhhC----CeEEEEECCHHHHHHHHHhhhhcCCceEEEEcChhh-cC-CCCCcCEEEEeCCchh
Confidence 68999999999999999887 244444554 555555444 21 11 1122222 22 358999999765 665
Q ss_pred ccccCCCCCChhhHHhhhhhcccCCceEEE
Q 039518 541 HYKNRGEVCSLEDIMLEMDLIIRPQGFIII 570 (617)
Q Consensus 541 ~~~~~~~~c~~~~~l~e~dRilRP~G~~i~ 570 (617)
+. .+.-....+|-++-|+|+|||.+++
T Consensus 109 ~~---~~~~~~~~~l~~~~~~L~pgG~l~~ 135 (243)
T 3d2l_A 109 YL---QTEADVKQTFDSAARLLTDGGKLLF 135 (243)
T ss_dssp GC---CSHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred hc---CCHHHHHHHHHHHHHhcCCCeEEEE
Confidence 43 3333456789999999999999998
No 313
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=97.84 E-value=1.4e-05 Score=79.98 Aligned_cols=94 Identities=22% Similarity=0.242 Sum_probs=62.1
Q ss_pred eeEEeccccccchhhhccCCCeEEEEeccCCCCchhHHHHhhcccc-cccccCCCCCCCCCccchhhccccccccccCCC
Q 039518 469 RNAMDMNAYCGGFAVALNSLPVWVMNIVPISMKNTLSAIYNRGILG-AFHDWCEPFSTYPRTYDLLHANHLFSHYKNRGE 547 (617)
Q Consensus 469 Rn~mDm~~~~g~faa~l~~~~v~vmnv~p~~~~~~l~~~~~RGlig-~~~~~~~~f~typrtyDl~H~~~~~s~~~~~~~ 547 (617)
.+|||+|||.|.++..|.+...-|.-|-+.. ..+..+-++.-+- +..|. +.++.-+.+||+||+.+++.++
T Consensus 36 ~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~--~~~~~a~~~~~~~~~~~d~-~~~~~~~~~fD~v~~~~~l~~~----- 107 (261)
T 3ege_A 36 SVIADIGAGTGGYSVALANQGLFVYAVEPSI--VMRQQAVVHPQVEWFTGYA-ENLALPDKSVDGVISILAIHHF----- 107 (261)
T ss_dssp CEEEEETCTTSHHHHHHHTTTCEEEEECSCH--HHHHSSCCCTTEEEECCCT-TSCCSCTTCBSEEEEESCGGGC-----
T ss_pred CEEEEEcCcccHHHHHHHhCCCEEEEEeCCH--HHHHHHHhccCCEEEECch-hhCCCCCCCEeEEEEcchHhhc-----
Confidence 6899999999999999987654343332221 3333222332111 22233 3344324899999999988765
Q ss_pred CCChhhHHhhhhhcccCCceEEEec
Q 039518 548 VCSLEDIMLEMDLIIRPQGFIIIRD 572 (617)
Q Consensus 548 ~c~~~~~l~e~dRilRP~G~~i~~d 572 (617)
-+...+|-|+-|+|| ||++++.+
T Consensus 108 -~~~~~~l~~~~~~Lk-gG~~~~~~ 130 (261)
T 3ege_A 108 -SHLEKSFQEMQRIIR-DGTIVLLT 130 (261)
T ss_dssp -SSHHHHHHHHHHHBC-SSCEEEEE
T ss_pred -cCHHHHHHHHHHHhC-CcEEEEEE
Confidence 246789999999999 99888753
No 314
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=97.83 E-value=2.1e-05 Score=72.88 Aligned_cols=118 Identities=13% Similarity=0.105 Sum_probs=78.4
Q ss_pred HhccCCCCCeeeEEeccccccchhhhccCCCeEEEEeccCCCC-chhHHHHhh----cc--c-ccccccCCCCCCCCCcc
Q 039518 459 QLMNVNETEIRNAMDMNAYCGGFAVALNSLPVWVMNIVPISMK-NTLSAIYNR----GI--L-GAFHDWCEPFSTYPRTY 530 (617)
Q Consensus 459 ~~~~~~~~~~Rn~mDm~~~~g~faa~l~~~~v~vmnv~p~~~~-~~l~~~~~R----Gl--i-g~~~~~~~~f~typrty 530 (617)
+.+.+..+ .+|||+|||.|.++..|.....-|.. .|-. ..+..+-++ |+ + -+..|+.++++. .+|
T Consensus 29 ~~~~~~~~--~~vLdiG~G~G~~~~~l~~~~~~v~~---vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~--~~~ 101 (183)
T 2yxd_A 29 GKLNLNKD--DVVVDVGCGSGGMTVEIAKRCKFVYA---IDYLDGAIEVTKQNLAKFNIKNCQIIKGRAEDVLDK--LEF 101 (183)
T ss_dssp HHHCCCTT--CEEEEESCCCSHHHHHHHTTSSEEEE---EECSHHHHHHHHHHHHHTTCCSEEEEESCHHHHGGG--CCC
T ss_pred HHcCCCCC--CEEEEeCCCCCHHHHHHHhcCCeEEE---EeCCHHHHHHHHHHHHHcCCCcEEEEECCccccccC--CCC
Confidence 33344444 48999999999999999874333332 2333 444444433 33 1 122344443332 689
Q ss_pred chhhccccccccccCCCCCChhhHHhhhhhcccCCceEEEec-ChHHHHHHHhhhhcCCceEEEee
Q 039518 531 DLLHANHLFSHYKNRGEVCSLEDIMLEMDLIIRPQGFIIIRD-EKSLITRIRDLAPKFLWDVELHS 595 (617)
Q Consensus 531 Dl~H~~~~~s~~~~~~~~c~~~~~l~e~dRilRP~G~~i~~d-~~~~~~~~~~~~~~~~W~~~~~~ 595 (617)
|+|.++.. ..+..++-++-|+ |||.+++.+ ..+...++.+.++...|++...+
T Consensus 102 D~i~~~~~----------~~~~~~l~~~~~~--~gG~l~~~~~~~~~~~~~~~~l~~~g~~~~~~~ 155 (183)
T 2yxd_A 102 NKAFIGGT----------KNIEKIIEILDKK--KINHIVANTIVLENAAKIINEFESRGYNVDAVN 155 (183)
T ss_dssp SEEEECSC----------SCHHHHHHHHHHT--TCCEEEEEESCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred cEEEECCc----------ccHHHHHHHHhhC--CCCEEEEEecccccHHHHHHHHHHcCCeEEEEE
Confidence 99996655 3456889999999 999999986 66777888888888888887763
No 315
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=97.83 E-value=2.3e-05 Score=83.71 Aligned_cols=104 Identities=13% Similarity=0.247 Sum_probs=63.0
Q ss_pred CCCeEEEECCCCcHHHHHhccC------------C--CcEEEeeecCCcHHHHHHHHH-----------------hCCCc
Q 039518 228 GVFQVLDVGCGVASFSAFLLPL------------D--IQTMSFAPKDGHENQIQFALE-----------------RGIGA 276 (617)
Q Consensus 228 ~g~rVLDIGCGtG~~a~~La~~------------g--v~~v~v~~iDis~~~lq~A~e-----------------rg~~~ 276 (617)
...+|+|+|||+|..+..+.+. + ..-+.+.-.|+..+.....-+ .+.+.
T Consensus 52 ~~~~IaDlGCssG~Nt~~~v~~ii~~i~~~~~~~~~~~pe~~v~~nDLp~NDFn~lF~~L~~~~~~~~~~~~~~~~~~~~ 131 (374)
T 3b5i_A 52 PPFTAVDLGCSSGANTVHIIDFIVKHISKRFDAAGIDPPEFTAFFSDLPSNDFNTLFQLLPPLVSNTCMEECLAADGNRS 131 (374)
T ss_dssp CCEEEEEETCCSSHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECTTSCHHHHHHHSCCBCCCC--CCC---CCCBC
T ss_pred CceEEEecCCCCChhHHHHHHHHHHHHHHHHhhcCCCCCceeEEecCCCccchHHHHhhhhhhhhhcchhhhccccCCCc
Confidence 3578999999999888777321 1 112344444443332211100 00011
Q ss_pred EEEEe---cCCCCCCCCCCeeEEEeccccccccc--------------------------------------chHHHHHH
Q 039518 277 MISAL---STKQLPYPSSSFEMVHCSRCRVDWHA--------------------------------------NDGILLKE 315 (617)
Q Consensus 277 ~~~~~---d~~~Lpf~d~sFDlV~~s~~l~h~~~--------------------------------------d~~~~L~e 315 (617)
.+..+ ....-.||+++||+|+|+.+ +||.. |...+|+.
T Consensus 132 ~f~~gvpgSFy~rlfP~~S~d~v~Ss~a-LHWls~~p~~l~~~~~~~~nkg~i~~~~~~~~v~~ay~~Qf~~D~~~fL~~ 210 (374)
T 3b5i_A 132 YFVAGVPGSFYRRLFPARTIDFFHSAFS-LHWLSQVPESVTDRRSAAYNRGRVFIHGAGEKTTTAYKRQFQADLAEFLRA 210 (374)
T ss_dssp SEEEEEESCTTSCCSCTTCEEEEEEESC-TTBCSSCCGGGGCTTSTTCCTTTSSSSSCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEecChhhhcccCCCcceEEEEecce-eeeeccCchhhhccccccccCCceEeCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 22222 23333578999999999875 46753 33446889
Q ss_pred HHHhccCCeEEEEEeCC
Q 039518 316 VDRVLRPNGYFVYSAPP 332 (617)
Q Consensus 316 l~RvLrPGG~Liis~p~ 332 (617)
.++.|+|||.++++...
T Consensus 211 ra~eL~pGG~mvl~~~g 227 (374)
T 3b5i_A 211 RAAEVKRGGAMFLVCLG 227 (374)
T ss_dssp HHHHEEEEEEEEEEEEE
T ss_pred HHHHhCCCCEEEEEEec
Confidence 99999999999998753
No 316
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=97.83 E-value=7.1e-06 Score=83.02 Aligned_cols=96 Identities=13% Similarity=0.210 Sum_probs=66.2
Q ss_pred eeEEeccccccchhhhccCCCeEEEEeccCCCC-chhHHHHhhc----ccc-------cccccCCC----CCCCCCccch
Q 039518 469 RNAMDMNAYCGGFAVALNSLPVWVMNIVPISMK-NTLSAIYNRG----ILG-------AFHDWCEP----FSTYPRTYDL 532 (617)
Q Consensus 469 Rn~mDm~~~~g~faa~l~~~~v~vmnv~p~~~~-~~l~~~~~RG----lig-------~~~~~~~~----f~typrtyDl 532 (617)
.+|||+|||.|.++..|.+... +|+-.|-. ..+..+-++. .-. .-.|+.+. |+ +.+||+
T Consensus 59 ~~vLDiGcG~G~~~~~l~~~~~---~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~--~~~fD~ 133 (293)
T 3thr_A 59 HRVLDVACGTGVDSIMLVEEGF---SVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLTLDKDVPA--GDGFDA 133 (293)
T ss_dssp CEEEETTCTTSHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGGHHHHSCC--TTCEEE
T ss_pred CEEEEecCCCCHHHHHHHHCCC---eEEEEECCHHHHHHHHHhhhhcccccccceeeEeecChhhCcccccc--CCCeEE
Confidence 5899999999999999987765 55555655 6666665431 111 11222110 22 389999
Q ss_pred hhcc-ccccccccCCC----CCChhhHHhhhhhcccCCceEEEec
Q 039518 533 LHAN-HLFSHYKNRGE----VCSLEDIMLEMDLIIRPQGFIIIRD 572 (617)
Q Consensus 533 ~H~~-~~~s~~~~~~~----~c~~~~~l~e~dRilRP~G~~i~~d 572 (617)
|++. .+|.+. .+ .-....+|-|+-|+|+|||++++..
T Consensus 134 V~~~g~~l~~~---~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 175 (293)
T 3thr_A 134 VICLGNSFAHL---PDSKGDQSEHRLALKNIASMVRPGGLLVIDH 175 (293)
T ss_dssp EEECTTCGGGS---CCSSSSSHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred EEEcChHHhhc---CccccCHHHHHHHHHHHHHHcCCCeEEEEEe
Confidence 9997 677655 22 2336689999999999999999974
No 317
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=97.83 E-value=0.00033 Score=74.53 Aligned_cols=142 Identities=7% Similarity=-0.026 Sum_probs=82.4
Q ss_pred HHHHHHHhhhhhccCCcccCCCCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHhCCCcEEEEecCCCCC
Q 039518 208 EYIQRLGNMMTNETGNLRSAGVFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALERGIGAMISALSTKQLP 287 (617)
Q Consensus 208 ~Y~~~L~~~L~~~~~~lr~~~g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~erg~~~~~~~~d~~~Lp 287 (617)
+..+.+..+++.......+.+|++|||+||++|.|+..|++++..++.|+...+++.. .....+.+...|...+.
T Consensus 191 KL~Ea~~~F~~~~~~~~~l~~G~~vlDLGAaPGGWT~~l~~rg~~V~aVD~~~l~~~l-----~~~~~V~~~~~d~~~~~ 265 (375)
T 4auk_A 191 KLEEAFHVFIPADEWDERLANGMWAVDLGACPGGWTYQLVKRNMWVYSVDNGPMAQSL-----MDTGQVTWLREDGFKFR 265 (375)
T ss_dssp HHHHHHHHHSCGGGHHHHSCTTCEEEEETCTTCHHHHHHHHTTCEEEEECSSCCCHHH-----HTTTCEEEECSCTTTCC
T ss_pred HHHHHHHhccchhhhhccCCCCCEEEEeCcCCCHHHHHHHHCCCEEEEEEhhhcChhh-----ccCCCeEEEeCcccccc
Confidence 4444444443322223346789999999999999999999998755555433333322 12335778888887777
Q ss_pred CCCCCeeEEEecccccccccchHHHHHHHHHhccCC---eEEEEEeCCCCCCCCCChhhHHHHHHHHHHcCceEE
Q 039518 288 YPSSSFEMVHCSRCRVDWHANDGILLKEVDRVLRPN---GYFVYSAPPAYRKDKDYPLIWDKLVNLTTAMCWKLI 359 (617)
Q Consensus 288 f~d~sFDlV~~s~~l~h~~~d~~~~L~el~RvLrPG---G~Liis~p~~~~~~~~~~~~W~~le~La~~~gw~~v 359 (617)
.+.+.||+|+|-. ..++...+.-+.+.|..| +.++..-.+.......-...+..+.+..+..|+...
T Consensus 266 ~~~~~~D~vvsDm-----~~~p~~~~~l~~~wl~~~~~~~aI~~lKL~mk~~~~~l~~~~~~i~~~l~~~g~~~~ 335 (375)
T 4auk_A 266 PTRSNISWMVCDM-----VEKPAKVAALMAQWLVNGWCRETIFNLKLPMKKRYEEVSHNLAYIQAQLDEHGINAQ 335 (375)
T ss_dssp CCSSCEEEEEECC-----SSCHHHHHHHHHHHHHTTSCSEEEEEEECCSSSHHHHHHHHHHHHHHHHHHTTCCEE
T ss_pred CCCCCcCEEEEcC-----CCChHHhHHHHHHHHhccccceEEEEEEecccchHHHHHHHHHHHHHHHHhcCcchh
Confidence 6778899999853 235666666666666555 443332221110000001112336666677777643
No 318
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=97.82 E-value=3.9e-05 Score=71.19 Aligned_cols=118 Identities=9% Similarity=0.076 Sum_probs=75.8
Q ss_pred ccCCCCCeeeEEeccccccchhhhccCC--CeEEEEeccCCCC-chhHHHHhh----ccc---ccccccCCCCCCCCCcc
Q 039518 461 MNVNETEIRNAMDMNAYCGGFAVALNSL--PVWVMNIVPISMK-NTLSAIYNR----GIL---GAFHDWCEPFSTYPRTY 530 (617)
Q Consensus 461 ~~~~~~~~Rn~mDm~~~~g~faa~l~~~--~v~vmnv~p~~~~-~~l~~~~~R----Gli---g~~~~~~~~f~typrty 530 (617)
+.+..+ .+|||+|||.|.++..|... ..-|. -.|-. ..+..+-++ |+- -+..|..+.++..+.+|
T Consensus 21 ~~~~~~--~~vldiG~G~G~~~~~l~~~~~~~~v~---~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 95 (178)
T 3hm2_A 21 LAPKPH--ETLWDIGGGSGSIAIEWLRSTPQTTAV---CFEISEERRERILSNAINLGVSDRIAVQQGAPRAFDDVPDNP 95 (178)
T ss_dssp HCCCTT--EEEEEESTTTTHHHHHHHTTSSSEEEE---EECSCHHHHHHHHHHHHTTTCTTSEEEECCTTGGGGGCCSCC
T ss_pred hcccCC--CeEEEeCCCCCHHHHHHHHHCCCCeEE---EEeCCHHHHHHHHHHHHHhCCCCCEEEecchHhhhhccCCCC
Confidence 334444 68999999999999988765 33232 23333 445555443 432 22334445555444789
Q ss_pred chhhccccccccccCCCCCChhhHHhhhhhcccCCceEEEecC-hHHHHHHHhhhhcCCceEEE
Q 039518 531 DLLHANHLFSHYKNRGEVCSLEDIMLEMDLIIRPQGFIIIRDE-KSLITRIRDLAPKFLWDVEL 593 (617)
Q Consensus 531 Dl~H~~~~~s~~~~~~~~c~~~~~l~e~dRilRP~G~~i~~d~-~~~~~~~~~~~~~~~W~~~~ 593 (617)
|+|.+...+.+ ..++-++-|+|+|||.+++.+. .+....+.++.+...+++..
T Consensus 96 D~i~~~~~~~~----------~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (178)
T 3hm2_A 96 DVIFIGGGLTA----------PGVFAAAWKRLPVGGRLVANAVTVESEQMLWALRKQFGGTISS 149 (178)
T ss_dssp SEEEECC-TTC----------TTHHHHHHHTCCTTCEEEEEECSHHHHHHHHHHHHHHCCEEEE
T ss_pred CEEEECCcccH----------HHHHHHHHHhcCCCCEEEEEeeccccHHHHHHHHHHcCCeeEE
Confidence 99997766652 4689999999999999999753 34455666666666565543
No 319
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=97.82 E-value=7.3e-06 Score=82.16 Aligned_cols=94 Identities=15% Similarity=0.268 Sum_probs=63.0
Q ss_pred eeEEeccccccchhhhccCC--CeEEEEeccCCCC-chhHHHHhh----cc--ccc-ccccCCCCCCCCCccchhhcccc
Q 039518 469 RNAMDMNAYCGGFAVALNSL--PVWVMNIVPISMK-NTLSAIYNR----GI--LGA-FHDWCEPFSTYPRTYDLLHANHL 538 (617)
Q Consensus 469 Rn~mDm~~~~g~faa~l~~~--~v~vmnv~p~~~~-~~l~~~~~R----Gl--ig~-~~~~~~~f~typrtyDl~H~~~~ 538 (617)
.+|||+|||.|.++..|... ..-|.-| |.. +.+..+-++ |+ +-. ..|.. .++.-+.+||+|++..+
T Consensus 39 ~~vLDiG~G~G~~~~~l~~~~~~~~v~~v---D~s~~~~~~a~~~~~~~~~~~~~~~~~d~~-~~~~~~~~fD~v~~~~~ 114 (276)
T 3mgg_A 39 AKVLEAGCGIGAQTVILAKNNPDAEITSI---DISPESLEKARENTEKNGIKNVKFLQANIF-SLPFEDSSFDHIFVCFV 114 (276)
T ss_dssp CEEEETTCTTSHHHHHHHHHCTTSEEEEE---ESCHHHHHHHHHHHHHTTCCSEEEEECCGG-GCCSCTTCEEEEEEESC
T ss_pred CeEEEecCCCCHHHHHHHHhCCCCEEEEE---ECCHHHHHHHHHHHHHcCCCCcEEEEcccc-cCCCCCCCeeEEEEech
Confidence 68999999999999988654 3333333 333 444444443 43 111 12222 23322489999999998
Q ss_pred ccccccCCCCCChhhHHhhhhhcccCCceEEEec
Q 039518 539 FSHYKNRGEVCSLEDIMLEMDLIIRPQGFIIIRD 572 (617)
Q Consensus 539 ~s~~~~~~~~c~~~~~l~e~dRilRP~G~~i~~d 572 (617)
+.+. . ....+|-++-|+|+|||++++.+
T Consensus 115 l~~~---~---~~~~~l~~~~~~L~pgG~l~~~~ 142 (276)
T 3mgg_A 115 LEHL---Q---SPEEALKSLKKVLKPGGTITVIE 142 (276)
T ss_dssp GGGC---S---CHHHHHHHHHHHEEEEEEEEEEE
T ss_pred hhhc---C---CHHHHHHHHHHHcCCCcEEEEEE
Confidence 8865 2 34689999999999999999964
No 320
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=97.81 E-value=1.9e-05 Score=73.84 Aligned_cols=136 Identities=10% Similarity=0.035 Sum_probs=82.6
Q ss_pred eeEEeccccccchhhhccCCCeEEEEeccCCCC-chhHHHHhhc--ccccccccCCCCCCCCCccchhhcc-cccccccc
Q 039518 469 RNAMDMNAYCGGFAVALNSLPVWVMNIVPISMK-NTLSAIYNRG--ILGAFHDWCEPFSTYPRTYDLLHAN-HLFSHYKN 544 (617)
Q Consensus 469 Rn~mDm~~~~g~faa~l~~~~v~vmnv~p~~~~-~~l~~~~~RG--lig~~~~~~~~f~typrtyDl~H~~-~~~s~~~~ 544 (617)
.+|||+|||.|.++..|..... ++.-.|.. ..+..+-++. +--+..|..+ ++.-+.+||+|.+. .++.+.
T Consensus 48 ~~vLdiG~G~G~~~~~l~~~~~---~v~~~D~~~~~~~~a~~~~~~~~~~~~d~~~-~~~~~~~~D~i~~~~~~~~~~-- 121 (195)
T 3cgg_A 48 AKILDAGCGQGRIGGYLSKQGH---DVLGTDLDPILIDYAKQDFPEARWVVGDLSV-DQISETDFDLIVSAGNVMGFL-- 121 (195)
T ss_dssp CEEEEETCTTTHHHHHHHHTTC---EEEEEESCHHHHHHHHHHCTTSEEEECCTTT-SCCCCCCEEEEEECCCCGGGS--
T ss_pred CeEEEECCCCCHHHHHHHHCCC---cEEEEcCCHHHHHHHHHhCCCCcEEEccccc-CCCCCCceeEEEECCcHHhhc--
Confidence 5899999999999999977654 33333443 4444444442 1112223322 22113789999987 566532
Q ss_pred CCCCCChhhHHhhhhhcccCCceEEEecCh---HHHHHHHhhhhcCCceEEEeecc--cc---CCCceeEEEEEec
Q 039518 545 RGEVCSLEDIMLEMDLIIRPQGFIIIRDEK---SLITRIRDLAPKFLWDVELHSLE--NR---EKKMESVLICRKK 612 (617)
Q Consensus 545 ~~~~c~~~~~l~e~dRilRP~G~~i~~d~~---~~~~~~~~~~~~~~W~~~~~~~e--~~---~~~~~~~l~~~k~ 612 (617)
..=....+|-++-|+|+|||.+++.... ...+++.++++...+++...... .. ....--++|++|+
T Consensus 122 --~~~~~~~~l~~~~~~l~~~G~l~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~~~~~~~~~~~~~~v~~k~ 195 (195)
T 3cgg_A 122 --AEDGREPALANIHRALGADGRAVIGFGAGRGWVFGDFLEVAERVGLELENAFESWDLKPFVQGSEFLVAVFTKK 195 (195)
T ss_dssp --CHHHHHHHHHHHHHHEEEEEEEEEEEETTSSCCHHHHHHHHHHHTEEEEEEESSTTCCBCCTTCSEEEEEEEEC
T ss_pred --ChHHHHHHHHHHHHHhCCCCEEEEEeCCCCCcCHHHHHHHHHHcCCEEeeeecccccCcCCCCCcEEEEEEecC
Confidence 1112457899999999999999996332 23566777777777776554221 11 1223446777774
No 321
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=97.81 E-value=1.6e-05 Score=80.21 Aligned_cols=92 Identities=10% Similarity=0.105 Sum_probs=64.4
Q ss_pred eeEEeccccccchhhhccCCCeEEEEeccCCCC-chhHHHHhhc--ccccccccCCCCCCCCCccchhhccccccccccC
Q 039518 469 RNAMDMNAYCGGFAVALNSLPVWVMNIVPISMK-NTLSAIYNRG--ILGAFHDWCEPFSTYPRTYDLLHANHLFSHYKNR 545 (617)
Q Consensus 469 Rn~mDm~~~~g~faa~l~~~~v~vmnv~p~~~~-~~l~~~~~RG--lig~~~~~~~~f~typrtyDl~H~~~~~s~~~~~ 545 (617)
.+|||+|||.|.++..|.+...-|. -.|-. ..+..+-++. +--...|.. .++ ++.+||+|++..++.+.
T Consensus 59 ~~vLDiGcG~G~~~~~l~~~~~~v~---gvD~s~~~~~~a~~~~~~~~~~~~d~~-~~~-~~~~fD~v~~~~~l~~~--- 130 (279)
T 3ccf_A 59 EFILDLGCGTGQLTEKIAQSGAEVL---GTDNAATMIEKARQNYPHLHFDVADAR-NFR-VDKPLDAVFSNAMLHWV--- 130 (279)
T ss_dssp CEEEEETCTTSHHHHHHHHTTCEEE---EEESCHHHHHHHHHHCTTSCEEECCTT-TCC-CSSCEEEEEEESCGGGC---
T ss_pred CEEEEecCCCCHHHHHHHhCCCeEE---EEECCHHHHHHHHhhCCCCEEEECChh-hCC-cCCCcCEEEEcchhhhC---
Confidence 5899999999999999977543332 33333 5555555552 222222332 244 37899999999888754
Q ss_pred CCCCChhhHHhhhhhcccCCceEEEe
Q 039518 546 GEVCSLEDIMLEMDLIIRPQGFIIIR 571 (617)
Q Consensus 546 ~~~c~~~~~l~e~dRilRP~G~~i~~ 571 (617)
. +...+|-|+-|+|||||++++.
T Consensus 131 ~---d~~~~l~~~~~~LkpgG~l~~~ 153 (279)
T 3ccf_A 131 K---EPEAAIASIHQALKSGGRFVAE 153 (279)
T ss_dssp S---CHHHHHHHHHHHEEEEEEEEEE
T ss_pred c---CHHHHHHHHHHhcCCCcEEEEE
Confidence 2 4668999999999999999996
No 322
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=97.79 E-value=1e-05 Score=81.02 Aligned_cols=93 Identities=12% Similarity=0.200 Sum_probs=64.9
Q ss_pred eeEEeccccccchhhhccCCCe-EEEEeccCCCC-chhHHHHhh----cccc----cccccCCCCCCCCCccchhhcccc
Q 039518 469 RNAMDMNAYCGGFAVALNSLPV-WVMNIVPISMK-NTLSAIYNR----GILG----AFHDWCEPFSTYPRTYDLLHANHL 538 (617)
Q Consensus 469 Rn~mDm~~~~g~faa~l~~~~v-~vmnv~p~~~~-~~l~~~~~R----Glig----~~~~~~~~f~typrtyDl~H~~~~ 538 (617)
.+|||+|||.|.++..|.+.+- -|.-| |-. ..+..+-++ |+-. +..|+ +.++.-+.+||+|.+.++
T Consensus 48 ~~vLDiGcG~G~~~~~la~~~~~~v~gv---D~s~~~~~~a~~~~~~~~~~~~v~~~~~d~-~~~~~~~~~fD~i~~~~~ 123 (267)
T 3kkz_A 48 SLIADIGCGTGGQTMVLAGHVTGQVTGL---DFLSGFIDIFNRNARQSGLQNRVTGIVGSM-DDLPFRNEELDLIWSEGA 123 (267)
T ss_dssp CEEEEETCTTCHHHHHHHTTCSSEEEEE---ESCHHHHHHHHHHHHHTTCTTTEEEEECCT-TSCCCCTTCEEEEEESSC
T ss_pred CEEEEeCCCCCHHHHHHHhccCCEEEEE---eCCHHHHHHHHHHHHHcCCCcCcEEEEcCh-hhCCCCCCCEEEEEEcCC
Confidence 6899999999999999987743 33333 333 455554443 4322 22333 334422489999999998
Q ss_pred ccccccCCCCCChhhHHhhhhhcccCCceEEEec
Q 039518 539 FSHYKNRGEVCSLEDIMLEMDLIIRPQGFIIIRD 572 (617)
Q Consensus 539 ~s~~~~~~~~c~~~~~l~e~dRilRP~G~~i~~d 572 (617)
+.+. ....+|-++-|+|+|||++++.+
T Consensus 124 ~~~~-------~~~~~l~~~~~~LkpgG~l~~~~ 150 (267)
T 3kkz_A 124 IYNI-------GFERGLNEWRKYLKKGGYLAVSE 150 (267)
T ss_dssp GGGT-------CHHHHHHHHGGGEEEEEEEEEEE
T ss_pred ceec-------CHHHHHHHHHHHcCCCCEEEEEE
Confidence 8742 46789999999999999999974
No 323
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=97.79 E-value=1.9e-05 Score=77.92 Aligned_cols=91 Identities=15% Similarity=0.114 Sum_probs=63.2
Q ss_pred eeEEeccccccchhhhccCC----CeEEEEeccCCCC-chhHHHHhhc--ccccccccCCCCCCCCCccchhhccccccc
Q 039518 469 RNAMDMNAYCGGFAVALNSL----PVWVMNIVPISMK-NTLSAIYNRG--ILGAFHDWCEPFSTYPRTYDLLHANHLFSH 541 (617)
Q Consensus 469 Rn~mDm~~~~g~faa~l~~~----~v~vmnv~p~~~~-~~l~~~~~RG--lig~~~~~~~~f~typrtyDl~H~~~~~s~ 541 (617)
.+|||+|||.|.++..|.+. .|..+ |-. ..+..+-++. +--+..|. +.++ -+.+||+|++..++.+
T Consensus 35 ~~vLdiG~G~G~~~~~l~~~~~~~~v~~~-----D~s~~~~~~a~~~~~~~~~~~~d~-~~~~-~~~~fD~v~~~~~l~~ 107 (259)
T 2p35_A 35 LNGYDLGCGPGNSTELLTDRYGVNVITGI-----DSDDDMLEKAADRLPNTNFGKADL-ATWK-PAQKADLLYANAVFQW 107 (259)
T ss_dssp SSEEEETCTTTHHHHHHHHHHCTTSEEEE-----ESCHHHHHHHHHHSTTSEEEECCT-TTCC-CSSCEEEEEEESCGGG
T ss_pred CEEEEecCcCCHHHHHHHHhCCCCEEEEE-----ECCHHHHHHHHHhCCCcEEEECCh-hhcC-ccCCcCEEEEeCchhh
Confidence 58999999999999888654 33333 333 5566665552 11122222 2344 3589999999888875
Q ss_pred cccCCCCCChhhHHhhhhhcccCCceEEEec
Q 039518 542 YKNRGEVCSLEDIMLEMDLIIRPQGFIIIRD 572 (617)
Q Consensus 542 ~~~~~~~c~~~~~l~e~dRilRP~G~~i~~d 572 (617)
. . +...+|-|+-|+|+|||++++..
T Consensus 108 ~---~---~~~~~l~~~~~~L~pgG~l~~~~ 132 (259)
T 2p35_A 108 V---P---DHLAVLSQLMDQLESGGVLAVQM 132 (259)
T ss_dssp S---T---THHHHHHHHGGGEEEEEEEEEEE
T ss_pred C---C---CHHHHHHHHHHhcCCCeEEEEEe
Confidence 4 2 46789999999999999999974
No 324
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=97.78 E-value=2.7e-05 Score=80.48 Aligned_cols=128 Identities=13% Similarity=0.149 Sum_probs=81.2
Q ss_pred eeEEeccccccchhhhccCCCe-EEEEeccCCCC-chhHHHHhh--cccc----cccccCCCCCCCC-Cccchhhccccc
Q 039518 469 RNAMDMNAYCGGFAVALNSLPV-WVMNIVPISMK-NTLSAIYNR--GILG----AFHDWCEPFSTYP-RTYDLLHANHLF 539 (617)
Q Consensus 469 Rn~mDm~~~~g~faa~l~~~~v-~vmnv~p~~~~-~~l~~~~~R--Glig----~~~~~~~~f~typ-rtyDl~H~~~~~ 539 (617)
++|||+|||+|+|+..|...+. -|..| |-. ++|...+.+ .++. -+.... ....| .+||++-++..|
T Consensus 87 ~~vLDiGcGTG~~t~~L~~~ga~~V~aV---Dvs~~mL~~a~r~~~rv~~~~~~ni~~l~--~~~l~~~~fD~v~~d~sf 161 (291)
T 3hp7_A 87 MITIDIGASTGGFTDVMLQNGAKLVYAV---DVGTNQLVWKLRQDDRVRSMEQYNFRYAE--PVDFTEGLPSFASIDVSF 161 (291)
T ss_dssp CEEEEETCTTSHHHHHHHHTTCSEEEEE---CSSSSCSCHHHHTCTTEEEECSCCGGGCC--GGGCTTCCCSEEEECCSS
T ss_pred cEEEecCCCccHHHHHHHhCCCCEEEEE---ECCHHHHHHHHHhCcccceecccCceecc--hhhCCCCCCCEEEEEeeH
Confidence 6899999999999988876653 33333 333 666654432 1111 011111 11134 459999988777
Q ss_pred cccccCCCCCChhhHHhhhhhcccCCceEEEe---------cC-------------hHHHHHHHhhhhcCCceEEEeecc
Q 039518 540 SHYKNRGEVCSLEDIMLEMDLIIRPQGFIIIR---------DE-------------KSLITRIRDLAPKFLWDVELHSLE 597 (617)
Q Consensus 540 s~~~~~~~~c~~~~~l~e~dRilRP~G~~i~~---------d~-------------~~~~~~~~~~~~~~~W~~~~~~~e 597 (617)
.. +..+|-|+-|+|+|||.+++- +. ...++++.+++...-|.+......
T Consensus 162 ~s---------l~~vL~e~~rvLkpGG~lv~lvkPqfe~~~~~~~~~G~vrd~~~~~~~~~~v~~~~~~~Gf~v~~~~~s 232 (291)
T 3hp7_A 162 IS---------LNLILPALAKILVDGGQVVALVKPQFEAGREQIGKNGIVRESSIHEKVLETVTAFAVDYGFSVKGLDFS 232 (291)
T ss_dssp SC---------GGGTHHHHHHHSCTTCEEEEEECGGGTSCGGGCC-CCCCCCHHHHHHHHHHHHHHHHHTTEEEEEEEEC
T ss_pred hh---------HHHHHHHHHHHcCcCCEEEEEECcccccChhhcCCCCccCCHHHHHHHHHHHHHHHHHCCCEEEEEEEC
Confidence 62 367999999999999999885 10 146788888888899987665432
Q ss_pred --ccCCCceeEEEEE
Q 039518 598 --NREKKMESVLICR 610 (617)
Q Consensus 598 --~~~~~~~~~l~~~ 610 (617)
.|+.+....|++-
T Consensus 233 pi~g~~gn~e~l~~~ 247 (291)
T 3hp7_A 233 PIQGGHGNIEFLAHL 247 (291)
T ss_dssp SSCCGGGCCCEEEEE
T ss_pred CCCCCCcCHHHHHHh
Confidence 3444444444443
No 325
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=97.78 E-value=1.4e-05 Score=89.35 Aligned_cols=105 Identities=15% Similarity=0.016 Sum_probs=75.2
Q ss_pred CCCeEEEECCCCcHHHHHhccC----CC-------------cEEEeeecCCcHHHHHHHHHh----CCC------cEEEE
Q 039518 228 GVFQVLDVGCGVASFSAFLLPL----DI-------------QTMSFAPKDGHENQIQFALER----GIG------AMISA 280 (617)
Q Consensus 228 ~g~rVLDIGCGtG~~a~~La~~----gv-------------~~v~v~~iDis~~~lq~A~er----g~~------~~~~~ 280 (617)
++.+|||.+||+|.|+..+++. .. ....+.++|+++.+++.|+.+ +.. ..+..
T Consensus 169 ~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~lA~~nl~l~gi~~~~~~~~~I~~ 248 (541)
T 2ar0_A 169 PREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLALMNCLLHDIEGNLDHGGAIRL 248 (541)
T ss_dssp TTCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHHHHHHHHTTTCCCBGGGTBSEEE
T ss_pred CCCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHHHHHHHHHHhCCCccccccCCeEe
Confidence 4567999999999998777643 10 122688999999999999864 544 56777
Q ss_pred ecCCCCC-CCCCCeeEEEecccccccc-------------cchHHHHHHHHHhccCCeEEEEEeCC
Q 039518 281 LSTKQLP-YPSSSFEMVHCSRCRVDWH-------------ANDGILLKEVDRVLRPNGYFVYSAPP 332 (617)
Q Consensus 281 ~d~~~Lp-f~d~sFDlV~~s~~l~h~~-------------~d~~~~L~el~RvLrPGG~Liis~p~ 332 (617)
+|+...+ ...+.||+|+++--+.... .....++..+.+.|+|||++++..|.
T Consensus 249 gDtL~~~~~~~~~fD~Vv~NPPf~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~a~V~p~ 314 (541)
T 2ar0_A 249 GNTLGSDGENLPKAHIVATNPPFGSAAGTNITRTFVHPTSNKQLCFMQHIIETLHPGGRAAVVVPD 314 (541)
T ss_dssp SCTTSHHHHTSCCEEEEEECCCCTTCSSCCCCSCCSSCCSCHHHHHHHHHHHHEEEEEEEEEEEEH
T ss_pred CCCcccccccccCCeEEEECCCcccccchhhHhhcCCCCCchHHHHHHHHHHHhCCCCEEEEEecC
Confidence 7764433 3457899999874332211 01236899999999999999999874
No 326
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=97.78 E-value=3.3e-05 Score=74.09 Aligned_cols=93 Identities=16% Similarity=0.179 Sum_probs=63.1
Q ss_pred eeeEEeccccccchhhhccCCCeEEEEeccCCCC-chhHHHHhh--cccccccccCCCCCCCCCccchhhcccccccccc
Q 039518 468 IRNAMDMNAYCGGFAVALNSLPVWVMNIVPISMK-NTLSAIYNR--GILGAFHDWCEPFSTYPRTYDLLHANHLFSHYKN 544 (617)
Q Consensus 468 ~Rn~mDm~~~~g~faa~l~~~~v~vmnv~p~~~~-~~l~~~~~R--Glig~~~~~~~~f~typrtyDl~H~~~~~s~~~~ 544 (617)
-.+|||+|||.|.++..| ... ++.-.|.. ..+..+-++ ++--+..|. +.++.-+.+||+|.+.+++.+.
T Consensus 37 ~~~vLdiG~G~G~~~~~l-~~~----~v~~vD~s~~~~~~a~~~~~~~~~~~~d~-~~~~~~~~~fD~v~~~~~l~~~-- 108 (211)
T 2gs9_A 37 GESLLEVGAGTGYWLRRL-PYP----QKVGVEPSEAMLAVGRRRAPEATWVRAWG-EALPFPGESFDVVLLFTTLEFV-- 108 (211)
T ss_dssp CSEEEEETCTTCHHHHHC-CCS----EEEEECCCHHHHHHHHHHCTTSEEECCCT-TSCCSCSSCEEEEEEESCTTTC--
T ss_pred CCeEEEECCCCCHhHHhC-CCC----eEEEEeCCHHHHHHHHHhCCCcEEEEccc-ccCCCCCCcEEEEEEcChhhhc--
Confidence 358999999999999998 320 22333444 555556555 221122222 2233223799999999888754
Q ss_pred CCCCCChhhHHhhhhhcccCCceEEEec
Q 039518 545 RGEVCSLEDIMLEMDLIIRPQGFIIIRD 572 (617)
Q Consensus 545 ~~~~c~~~~~l~e~dRilRP~G~~i~~d 572 (617)
. ....+|-|+-|+|+|||.+++.+
T Consensus 109 -~---~~~~~l~~~~~~L~pgG~l~i~~ 132 (211)
T 2gs9_A 109 -E---DVERVLLEARRVLRPGGALVVGV 132 (211)
T ss_dssp -S---CHHHHHHHHHHHEEEEEEEEEEE
T ss_pred -C---CHHHHHHHHHHHcCCCCEEEEEe
Confidence 2 56789999999999999999974
No 327
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=97.78 E-value=1.6e-05 Score=76.86 Aligned_cols=98 Identities=11% Similarity=0.216 Sum_probs=64.4
Q ss_pred eeEEeccccccchhhhccCCCeEEEEeccCCCC-chhHHHHhh----cc-------cccccccCCCCCCCCCccchhhcc
Q 039518 469 RNAMDMNAYCGGFAVALNSLPVWVMNIVPISMK-NTLSAIYNR----GI-------LGAFHDWCEPFSTYPRTYDLLHAN 536 (617)
Q Consensus 469 Rn~mDm~~~~g~faa~l~~~~v~vmnv~p~~~~-~~l~~~~~R----Gl-------ig~~~~~~~~f~typrtyDl~H~~ 536 (617)
.+|||+|||.|.++.+|..... +|+-.|-. ..+..+-++ |+ +-....=.+.++.-+.+||+|-+.
T Consensus 32 ~~vLdiG~G~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~ 108 (235)
T 3sm3_A 32 DEILDIGCGSGKISLELASKGY---SVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENASSLSFHDSSFDFAVMQ 108 (235)
T ss_dssp CEEEEETCTTSHHHHHHHHTTC---EEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTSCCSCTTCEEEEEEE
T ss_pred CeEEEECCCCCHHHHHHHhCCC---eEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEecccccCCCCCceeEEEEc
Confidence 5799999999999999987754 33334443 455555543 22 111111112233224899999999
Q ss_pred ccccccccCCCCCChhhHHhhhhhcccCCceEEEec
Q 039518 537 HLFSHYKNRGEVCSLEDIMLEMDLIIRPQGFIIIRD 572 (617)
Q Consensus 537 ~~~s~~~~~~~~c~~~~~l~e~dRilRP~G~~i~~d 572 (617)
.++.+. .+.-....+|-++-|+|||||.+++.+
T Consensus 109 ~~l~~~---~~~~~~~~~l~~~~~~L~pgG~l~~~~ 141 (235)
T 3sm3_A 109 AFLTSV---PDPKERSRIIKEVFRVLKPGAYLYLVE 141 (235)
T ss_dssp SCGGGC---CCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred chhhcC---CCHHHHHHHHHHHHHHcCCCeEEEEEE
Confidence 888865 332223378999999999999999974
No 328
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=97.78 E-value=4.1e-05 Score=73.37 Aligned_cols=144 Identities=14% Similarity=0.085 Sum_probs=88.7
Q ss_pred cccCccccccchhhHHHHHHH-HHHhccCCCCCeeeEEeccccccchhhhccCCC--eEEEEeccCCCC-chhHHHHhh-
Q 039518 436 IGITQEEFTTDTSFWQDQVRH-YWQLMNVNETEIRNAMDMNAYCGGFAVALNSLP--VWVMNIVPISMK-NTLSAIYNR- 510 (617)
Q Consensus 436 ~~~~~~~f~~d~~~w~~~v~~-y~~~~~~~~~~~Rn~mDm~~~~g~faa~l~~~~--v~vmnv~p~~~~-~~l~~~~~R- 510 (617)
+|+..+.|..+...=++.+.. -...+++..+ .+|||+|||.|.++..|.... .-| +-.|-. ..+..+-++
T Consensus 10 ~g~~d~~f~~~g~~~~~~i~~~~l~~l~~~~~--~~vLDiG~G~G~~~~~la~~~~~~~v---~~vD~s~~~~~~a~~~~ 84 (204)
T 3e05_A 10 GIDDDEFATAKKLITKQEVRAVTLSKLRLQDD--LVMWDIGAGSASVSIEASNLMPNGRI---FALERNPQYLGFIRDNL 84 (204)
T ss_dssp CCCGGGSCCCTTTSCCHHHHHHHHHHTTCCTT--CEEEEETCTTCHHHHHHHHHCTTSEE---EEEECCHHHHHHHHHHH
T ss_pred CCCCcHHhccCCcCChHHHHHHHHHHcCCCCC--CEEEEECCCCCHHHHHHHHHCCCCEE---EEEeCCHHHHHHHHHHH
Confidence 456666777655543344422 2333445554 689999999999998886542 222 222333 444444433
Q ss_pred ---cc--cc-cccccCCCCCCCCCccchhhccccccccccCCCCCChhhHHhhhhhcccCCceEEEec-ChHHHHHHHhh
Q 039518 511 ---GI--LG-AFHDWCEPFSTYPRTYDLLHANHLFSHYKNRGEVCSLEDIMLEMDLIIRPQGFIIIRD-EKSLITRIRDL 583 (617)
Q Consensus 511 ---Gl--ig-~~~~~~~~f~typrtyDl~H~~~~~s~~~~~~~~c~~~~~l~e~dRilRP~G~~i~~d-~~~~~~~~~~~ 583 (617)
|+ +- +..|..+.++. ..+||+|-++..+. .+..++-++-|+|+|||.+++.. ..+...++.++
T Consensus 85 ~~~~~~~v~~~~~d~~~~~~~-~~~~D~i~~~~~~~---------~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~ 154 (204)
T 3e05_A 85 KKFVARNVTLVEAFAPEGLDD-LPDPDRVFIGGSGG---------MLEEIIDAVDRRLKSEGVIVLNAVTLDTLTKAVEF 154 (204)
T ss_dssp HHHTCTTEEEEECCTTTTCTT-SCCCSEEEESCCTT---------CHHHHHHHHHHHCCTTCEEEEEECBHHHHHHHHHH
T ss_pred HHhCCCcEEEEeCChhhhhhc-CCCCCEEEECCCCc---------CHHHHHHHHHHhcCCCeEEEEEecccccHHHHHHH
Confidence 43 11 22333343332 25799987554432 45689999999999999999984 44667788888
Q ss_pred hhcCCceEEEe
Q 039518 584 APKFLWDVELH 594 (617)
Q Consensus 584 ~~~~~W~~~~~ 594 (617)
++...|++...
T Consensus 155 l~~~g~~~~~~ 165 (204)
T 3e05_A 155 LEDHGYMVEVA 165 (204)
T ss_dssp HHHTTCEEEEE
T ss_pred HHHCCCceeEE
Confidence 88888765544
No 329
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=97.76 E-value=5.4e-05 Score=73.36 Aligned_cols=142 Identities=11% Similarity=0.038 Sum_probs=83.5
Q ss_pred cccCccccccchhhHHHHHHH-HHHhccCCCCCeeeEEeccccccchhhhccCCCeEEEEeccCCCC-chhHHHHhh---
Q 039518 436 IGITQEEFTTDTSFWQDQVRH-YWQLMNVNETEIRNAMDMNAYCGGFAVALNSLPVWVMNIVPISMK-NTLSAIYNR--- 510 (617)
Q Consensus 436 ~~~~~~~f~~d~~~w~~~v~~-y~~~~~~~~~~~Rn~mDm~~~~g~faa~l~~~~v~vmnv~p~~~~-~~l~~~~~R--- 510 (617)
+|+..+.|..+...-+..+.. -...+.+..+ .+|||+|||.|.++.+|.....-| +-.|-. ..+..+-++
T Consensus 25 ~g~~d~~f~~~~~~~~~~~~~~~l~~l~~~~~--~~vLDlGcG~G~~~~~la~~~~~v---~~vD~s~~~~~~a~~~~~~ 99 (204)
T 3njr_A 25 PGRPESAFAHDGQITKSPMRALTLAALAPRRG--ELLWDIGGGSGSVSVEWCLAGGRA---ITIEPRADRIENIQKNIDT 99 (204)
T ss_dssp SCCCGGGSCCSSCCCCHHHHHHHHHHHCCCTT--CEEEEETCTTCHHHHHHHHTTCEE---EEEESCHHHHHHHHHHHHH
T ss_pred CCCCHHHhhcCCCCCcHHHHHHHHHhcCCCCC--CEEEEecCCCCHHHHHHHHcCCEE---EEEeCCHHHHHHHHHHHHH
Confidence 455566665444444444433 2233445554 579999999999998886653322 223333 444444333
Q ss_pred -ccc---cc-ccccCCCCCCCCCccchhhccccccccccCCCCCChhhHHhhhhhcccCCceEEEec-ChHHHHHHHhhh
Q 039518 511 -GIL---GA-FHDWCEPFSTYPRTYDLLHANHLFSHYKNRGEVCSLEDIMLEMDLIIRPQGFIIIRD-EKSLITRIRDLA 584 (617)
Q Consensus 511 -Gli---g~-~~~~~~~f~typrtyDl~H~~~~~s~~~~~~~~c~~~~~l~e~dRilRP~G~~i~~d-~~~~~~~~~~~~ 584 (617)
|+- -+ ..|..+.++.. ..||+|-+++. .... ++-++-|+|||||.+++.. ..+...++.+.+
T Consensus 100 ~g~~~~v~~~~~d~~~~~~~~-~~~D~v~~~~~----------~~~~-~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~l 167 (204)
T 3njr_A 100 YGLSPRMRAVQGTAPAALADL-PLPEAVFIGGG----------GSQA-LYDRLWEWLAPGTRIVANAVTLESETLLTQLH 167 (204)
T ss_dssp TTCTTTEEEEESCTTGGGTTS-CCCSEEEECSC----------CCHH-HHHHHHHHSCTTCEEEEEECSHHHHHHHHHHH
T ss_pred cCCCCCEEEEeCchhhhcccC-CCCCEEEECCc----------ccHH-HHHHHHHhcCCCcEEEEEecCcccHHHHHHHH
Confidence 443 11 22322323222 36888764331 1345 8999999999999999974 456666777777
Q ss_pred hcCCceEEEe
Q 039518 585 PKFLWDVELH 594 (617)
Q Consensus 585 ~~~~W~~~~~ 594 (617)
+...+++...
T Consensus 168 ~~~g~~i~~i 177 (204)
T 3njr_A 168 ARHGGQLLRI 177 (204)
T ss_dssp HHHCSEEEEE
T ss_pred HhCCCcEEEE
Confidence 6666765444
No 330
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=97.76 E-value=0.0001 Score=78.33 Aligned_cols=103 Identities=16% Similarity=0.253 Sum_probs=69.5
Q ss_pred CCeEEEECCCCcHHHHHhccC---------------CCcEEEeeecCCcHHHHHHHHHhCC------CcEEEEe---cCC
Q 039518 229 VFQVLDVGCGVASFSAFLLPL---------------DIQTMSFAPKDGHENQIQFALERGI------GAMISAL---STK 284 (617)
Q Consensus 229 g~rVLDIGCGtG~~a~~La~~---------------gv~~v~v~~iDis~~~lq~A~erg~------~~~~~~~---d~~ 284 (617)
..+|+|+||++|..+..+.+. ...-+.+...|+..+.....-+.-. +..+..+ ...
T Consensus 52 ~~~IaDlGCs~G~Nt~~~v~~ii~~i~~~~~~~~~~~~pe~~v~~nDLp~NDFntlF~~L~~~~~~~~~~f~~gvpgSFy 131 (359)
T 1m6e_X 52 RLAIADLGCSSGPNALFAVTELIKTVEELRKKMGRENSPEYQIFLNDLPGNDFNAIFRSLPIENDVDGVCFINGVPGSFY 131 (359)
T ss_dssp EECCEEESCCSSTTTTTGGGTTHHHHHHHHHSSSCSSCCEEEEEEEECTTSCHHHHHTTTTTSCSCTTCEEEEEEESCSS
T ss_pred ceEEEecCCCCCcchHHHHHHHHHHHHHHHHhcCCCCCCceEEEecCCCchHHHHHHHhcchhcccCCCEEEEecchhhh
Confidence 456999999999877766544 2334566677766666554443311 2234333 234
Q ss_pred CCCCCCCCeeEEEecccccccccc---------------------------------hHHHHHHHHHhccCCeEEEEEeC
Q 039518 285 QLPYPSSSFEMVHCSRCRVDWHAN---------------------------------DGILLKEVDRVLRPNGYFVYSAP 331 (617)
Q Consensus 285 ~Lpf~d~sFDlV~~s~~l~h~~~d---------------------------------~~~~L~el~RvLrPGG~Liis~p 331 (617)
.-.||+++||+|+|+.+ +||..+ ...+|+..++.|+|||.++++..
T Consensus 132 ~rlfp~~S~d~v~Ss~a-LHWls~~p~~l~~nkg~i~~~~~~p~~v~~ay~~Qf~~D~~~FL~~Ra~EL~pGG~mvl~~~ 210 (359)
T 1m6e_X 132 GRLFPRNTLHFIHSSYS-LMWLSQVPIGIESNKGNIYMANTCPQSVLNAYYKQFQEDHALFLRCRAQEVVPGGRMVLTIL 210 (359)
T ss_dssp SCCSCTTCBSCEEEESC-TTBCSSCCSCCCCCTTTTSSCSSSCCTTSCCSHHHHHHHHHHHHHHHHHHBCTTCEEEEEEE
T ss_pred hccCCCCceEEEEehhh-hhhcccCchhhhccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEEe
Confidence 45689999999999875 567532 12348889999999999999865
Q ss_pred C
Q 039518 332 P 332 (617)
Q Consensus 332 ~ 332 (617)
.
T Consensus 211 g 211 (359)
T 1m6e_X 211 G 211 (359)
T ss_dssp E
T ss_pred c
Confidence 3
No 331
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=97.75 E-value=2.5e-05 Score=79.19 Aligned_cols=96 Identities=16% Similarity=0.095 Sum_probs=64.3
Q ss_pred eeeEEeccccccchhhhccCC---CeEEEEeccCCCC-chhHHHHhh----c--ccccccccCCCCCCCCCccchhhccc
Q 039518 468 IRNAMDMNAYCGGFAVALNSL---PVWVMNIVPISMK-NTLSAIYNR----G--ILGAFHDWCEPFSTYPRTYDLLHANH 537 (617)
Q Consensus 468 ~Rn~mDm~~~~g~faa~l~~~---~v~vmnv~p~~~~-~~l~~~~~R----G--lig~~~~~~~~f~typrtyDl~H~~~ 537 (617)
-.+|||+|||.|.++..|.+. ..-|.-| |-. ..+..+-++ | +-=+..|.. .++ +|.+||+||+..
T Consensus 23 ~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gv---D~s~~~~~~a~~~~~~~~~~v~~~~~d~~-~~~-~~~~fD~v~~~~ 97 (284)
T 3gu3_A 23 PVHIVDYGCGYGYLGLVLMPLLPEGSKYTGI---DSGETLLAEARELFRLLPYDSEFLEGDAT-EIE-LNDKYDIAICHA 97 (284)
T ss_dssp CCEEEEETCTTTHHHHHHTTTSCTTCEEEEE---ESCHHHHHHHHHHHHSSSSEEEEEESCTT-TCC-CSSCEEEEEEES
T ss_pred CCeEEEecCCCCHHHHHHHHhCCCCCEEEEE---ECCHHHHHHHHHHHHhcCCceEEEEcchh-hcC-cCCCeeEEEECC
Confidence 468999999999999999765 2333322 222 444444333 2 111223333 233 378999999999
Q ss_pred cccccccCCCCCChhhHHhhhhhcccCCceEEEecCh
Q 039518 538 LFSHYKNRGEVCSLEDIMLEMDLIIRPQGFIIIRDEK 574 (617)
Q Consensus 538 ~~s~~~~~~~~c~~~~~l~e~dRilRP~G~~i~~d~~ 574 (617)
++.+. . +...+|-|+-|+|+|||++++.+..
T Consensus 98 ~l~~~---~---~~~~~l~~~~~~LkpgG~l~~~~~~ 128 (284)
T 3gu3_A 98 FLLHM---T---TPETMLQKMIHSVKKGGKIICFEPH 128 (284)
T ss_dssp CGGGC---S---SHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred hhhcC---C---CHHHHHHHHHHHcCCCCEEEEEecc
Confidence 88754 2 3468999999999999999987543
No 332
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=97.75 E-value=1.1e-05 Score=80.07 Aligned_cols=100 Identities=10% Similarity=0.057 Sum_probs=64.3
Q ss_pred eeEEeccccccchhhhccCCCeEEEEeccCCCC-chhHHHHhhc----c--cccccccCCCCCCCC-Cccchhhcccccc
Q 039518 469 RNAMDMNAYCGGFAVALNSLPVWVMNIVPISMK-NTLSAIYNRG----I--LGAFHDWCEPFSTYP-RTYDLLHANHLFS 540 (617)
Q Consensus 469 Rn~mDm~~~~g~faa~l~~~~v~vmnv~p~~~~-~~l~~~~~RG----l--ig~~~~~~~~f~typ-rtyDl~H~~~~~s 540 (617)
..|||+|||.|.++.+|.+...= +++=.|.+ ..+..+-++. . .=+..||.+-...+| .+||.|..+.+.+
T Consensus 62 ~rVLdiG~G~G~~~~~~~~~~~~--~v~~id~~~~~~~~a~~~~~~~~~~~~~~~~~a~~~~~~~~~~~FD~i~~D~~~~ 139 (236)
T 3orh_A 62 GRVLEVGFGMAIAASKVQEAPID--EHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAPTLPDGHFDGILYDTYPL 139 (236)
T ss_dssp EEEEEECCTTSHHHHHHTTSCEE--EEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHGGGSCTTCEEEEEECCCCC
T ss_pred CeEEEECCCccHHHHHHHHhCCc--EEEEEeCCHHHHHHHHHHHhhCCCceEEEeehHHhhcccccccCCceEEEeeeec
Confidence 57999999999999999876531 22223444 6666666554 1 112234433223333 7899998766655
Q ss_pred ccccCCCCCChhhHHhhhhhcccCCceEEEe
Q 039518 541 HYKNRGEVCSLEDIMLEMDLIIRPQGFIIIR 571 (617)
Q Consensus 541 ~~~~~~~~c~~~~~l~e~dRilRP~G~~i~~ 571 (617)
.+ ..++.=..+.++-|+-|+|||||.+++-
T Consensus 140 ~~-~~~~~~~~~~~~~e~~rvLkPGG~l~f~ 169 (236)
T 3orh_A 140 SE-ETWHTHQFNFIKNHAFRLLKPGGVLTYC 169 (236)
T ss_dssp BG-GGTTTHHHHHHHHTHHHHEEEEEEEEEC
T ss_pred cc-chhhhcchhhhhhhhhheeCCCCEEEEE
Confidence 43 1122223457889999999999999985
No 333
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=97.74 E-value=8.4e-05 Score=74.84 Aligned_cols=82 Identities=11% Similarity=0.138 Sum_probs=60.0
Q ss_pred HHHHHHHhhhhhccCCcccCCCCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHh-CCCcEEEEecCCCC
Q 039518 208 EYIQRLGNMMTNETGNLRSAGVFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALER-GIGAMISALSTKQL 286 (617)
Q Consensus 208 ~Y~~~L~~~L~~~~~~lr~~~g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~er-g~~~~~~~~d~~~L 286 (617)
...+.+.+.+. ..++.+|||||||+|.++..|++++. ..++++|+++.+++.++++ ..++.+..+|+..+
T Consensus 18 ~i~~~iv~~~~-------~~~~~~VLDiG~G~G~lt~~L~~~~~--~~v~avEid~~~~~~~~~~~~~~v~~i~~D~~~~ 88 (249)
T 3ftd_A 18 GVLKKIAEELN-------IEEGNTVVEVGGGTGNLTKVLLQHPL--KKLYVIELDREMVENLKSIGDERLEVINEDASKF 88 (249)
T ss_dssp HHHHHHHHHTT-------CCTTCEEEEEESCHHHHHHHHTTSCC--SEEEEECCCHHHHHHHTTSCCTTEEEECSCTTTC
T ss_pred HHHHHHHHhcC-------CCCcCEEEEEcCchHHHHHHHHHcCC--CeEEEEECCHHHHHHHHhccCCCeEEEEcchhhC
Confidence 45555555543 23456799999999999999999852 2678889999999999887 22468888999888
Q ss_pred CCCCC--CeeEEEec
Q 039518 287 PYPSS--SFEMVHCS 299 (617)
Q Consensus 287 pf~d~--sFDlV~~s 299 (617)
++++. .| .|+++
T Consensus 89 ~~~~~~~~~-~vv~N 102 (249)
T 3ftd_A 89 PFCSLGKEL-KVVGN 102 (249)
T ss_dssp CGGGSCSSE-EEEEE
T ss_pred ChhHccCCc-EEEEE
Confidence 87642 23 45544
No 334
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=97.74 E-value=4.8e-05 Score=74.06 Aligned_cols=138 Identities=11% Similarity=0.097 Sum_probs=84.2
Q ss_pred eeEEecccc-ccchhhhccCC-CeEEEEeccCCCC-chhHHHHh----hcc-cccc-cccCCCCCCCC-Cccchhhcccc
Q 039518 469 RNAMDMNAY-CGGFAVALNSL-PVWVMNIVPISMK-NTLSAIYN----RGI-LGAF-HDWCEPFSTYP-RTYDLLHANHL 538 (617)
Q Consensus 469 Rn~mDm~~~-~g~faa~l~~~-~v~vmnv~p~~~~-~~l~~~~~----RGl-ig~~-~~~~~~f~typ-rtyDl~H~~~~ 538 (617)
.+|||+||| .|.++.+|... .. +|+-.|-. ..+..+-+ .|+ +-++ .|+ +.+..+| .+||+|-++-.
T Consensus 57 ~~vLDlG~G~~G~~~~~la~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~-~~~~~~~~~~fD~I~~npp 132 (230)
T 3evz_A 57 EVALEIGTGHTAMMALMAEKFFNC---KVTATEVDEEFFEYARRNIERNNSNVRLVKSNG-GIIKGVVEGTFDVIFSAPP 132 (230)
T ss_dssp CEEEEECCTTTCHHHHHHHHHHCC---EEEEEECCHHHHHHHHHHHHHTTCCCEEEECSS-CSSTTTCCSCEEEEEECCC
T ss_pred CEEEEcCCCHHHHHHHHHHHhcCC---EEEEEECCHHHHHHHHHHHHHhCCCcEEEeCCc-hhhhhcccCceeEEEECCC
Confidence 589999999 99999888655 22 23333333 44444332 343 2222 232 1233334 89999998755
Q ss_pred cccccc-------------CCCCCChhhHHhhhhhcccCCceEEEe--cChHHHHHHHhhhhcCCceEEEeeccccCCCc
Q 039518 539 FSHYKN-------------RGEVCSLEDIMLEMDLIIRPQGFIIIR--DEKSLITRIRDLAPKFLWDVELHSLENREKKM 603 (617)
Q Consensus 539 ~s~~~~-------------~~~~c~~~~~l~e~dRilRP~G~~i~~--d~~~~~~~~~~~~~~~~W~~~~~~~e~~~~~~ 603 (617)
|..... ......+..++-++-|+|+|||.+++- ...+...++.+.++...|++.......|. ..
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~g~-~~ 211 (230)
T 3evz_A 133 YYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALYLPDKEKLLNVIKERGIKLGYSVKDIKFKVGT-RW 211 (230)
T ss_dssp CC---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEEEESCHHHHHHHHHHHHHTTCEEEEEEECCCC--C
T ss_pred CcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEEecccHhHHHHHHHHHHHcCCceEEEEecCCC-eE
Confidence 542100 001111367899999999999999983 45567788888888889988776544333 23
Q ss_pred eeEEEEEe
Q 039518 604 ESVLICRK 611 (617)
Q Consensus 604 ~~~l~~~k 611 (617)
-.+++.+|
T Consensus 212 ~~~l~f~~ 219 (230)
T 3evz_A 212 RHSLIFFK 219 (230)
T ss_dssp EEEEEEEC
T ss_pred EEEEEEec
Confidence 45666665
No 335
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=97.74 E-value=1.6e-05 Score=81.54 Aligned_cols=76 Identities=11% Similarity=0.091 Sum_probs=56.9
Q ss_pred HHHHHHHhhhhhccCCcccCCCCeEEEECCCCcHHHHHhccCCCc-EEEeeecCCcHHHHHHHHHh-CCCcEEEEecCCC
Q 039518 208 EYIQRLGNMMTNETGNLRSAGVFQVLDVGCGVASFSAFLLPLDIQ-TMSFAPKDGHENQIQFALER-GIGAMISALSTKQ 285 (617)
Q Consensus 208 ~Y~~~L~~~L~~~~~~lr~~~g~rVLDIGCGtG~~a~~La~~gv~-~v~v~~iDis~~~lq~A~er-g~~~~~~~~d~~~ 285 (617)
...+.+.+.+. ..++.+|||||||+|.++..|++++.. ...++++|+++.+++.++++ ..++.+..+|+..
T Consensus 29 ~i~~~iv~~~~-------~~~~~~VLEIG~G~G~lt~~La~~~~~~~~~V~avDid~~~l~~a~~~~~~~v~~i~~D~~~ 101 (279)
T 3uzu_A 29 GVIDAIVAAIR-------PERGERMVEIGPGLGALTGPVIARLATPGSPLHAVELDRDLIGRLEQRFGELLELHAGDALT 101 (279)
T ss_dssp HHHHHHHHHHC-------CCTTCEEEEECCTTSTTHHHHHHHHCBTTBCEEEEECCHHHHHHHHHHHGGGEEEEESCGGG
T ss_pred HHHHHHHHhcC-------CCCcCEEEEEccccHHHHHHHHHhCCCcCCeEEEEECCHHHHHHHHHhcCCCcEEEECChhc
Confidence 44555555542 234567999999999999999987543 11277889999999999887 3467889999988
Q ss_pred CCCCC
Q 039518 286 LPYPS 290 (617)
Q Consensus 286 Lpf~d 290 (617)
+++++
T Consensus 102 ~~~~~ 106 (279)
T 3uzu_A 102 FDFGS 106 (279)
T ss_dssp CCGGG
T ss_pred CChhH
Confidence 88654
No 336
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=97.74 E-value=1e-05 Score=81.66 Aligned_cols=94 Identities=11% Similarity=0.153 Sum_probs=65.6
Q ss_pred eeEEeccccccchhhhccCCCeEEEEeccCCCC-chhHHHHhh----cc---cccc-cccCCCCC-CCCCccchhhcccc
Q 039518 469 RNAMDMNAYCGGFAVALNSLPVWVMNIVPISMK-NTLSAIYNR----GI---LGAF-HDWCEPFS-TYPRTYDLLHANHL 538 (617)
Q Consensus 469 Rn~mDm~~~~g~faa~l~~~~v~vmnv~p~~~~-~~l~~~~~R----Gl---ig~~-~~~~~~f~-typrtyDl~H~~~~ 538 (617)
..|||+|||.|.++..|.....-|.- .|-. ..+..+-++ |+ +-++ .|. +.++ ..+.+||+|.+.++
T Consensus 70 ~~vLDiGcG~G~~~~~l~~~~~~v~g---vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~-~~~~~~~~~~fD~v~~~~~ 145 (285)
T 4htf_A 70 LRVLDAGGGEGQTAIKMAERGHQVIL---CDLSAQMIDRAKQAAEAKGVSDNMQFIHCAA-QDVASHLETPVDLILFHAV 145 (285)
T ss_dssp CEEEEETCTTCHHHHHHHHTTCEEEE---EESCHHHHHHHHHHHHC-CCGGGEEEEESCG-GGTGGGCSSCEEEEEEESC
T ss_pred CEEEEeCCcchHHHHHHHHCCCEEEE---EECCHHHHHHHHHHHHhcCCCcceEEEEcCH-HHhhhhcCCCceEEEECch
Confidence 57999999999999999877553333 3333 455555443 43 1122 233 2233 23489999999999
Q ss_pred ccccccCCCCCChhhHHhhhhhcccCCceEEEec
Q 039518 539 FSHYKNRGEVCSLEDIMLEMDLIIRPQGFIIIRD 572 (617)
Q Consensus 539 ~s~~~~~~~~c~~~~~l~e~dRilRP~G~~i~~d 572 (617)
+.+. . +...+|-|+-|+|+|||.+++.+
T Consensus 146 l~~~---~---~~~~~l~~~~~~LkpgG~l~~~~ 173 (285)
T 4htf_A 146 LEWV---A---DPRSVLQTLWSVLRPGGVLSLMF 173 (285)
T ss_dssp GGGC---S---CHHHHHHHHHHTEEEEEEEEEEE
T ss_pred hhcc---c---CHHHHHHHHHHHcCCCeEEEEEE
Confidence 8865 2 34689999999999999999974
No 337
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=97.74 E-value=2.8e-05 Score=75.44 Aligned_cols=112 Identities=15% Similarity=0.136 Sum_probs=77.0
Q ss_pred eeEEeccccccchhhhccCCCeEEEEeccCCCC-chhHHHHhhcccccccccCCCCCCCCCccchhhccccccccccCCC
Q 039518 469 RNAMDMNAYCGGFAVALNSLPVWVMNIVPISMK-NTLSAIYNRGILGAFHDWCEPFSTYPRTYDLLHANHLFSHYKNRGE 547 (617)
Q Consensus 469 Rn~mDm~~~~g~faa~l~~~~v~vmnv~p~~~~-~~l~~~~~RGlig~~~~~~~~f~typrtyDl~H~~~~~s~~~~~~~ 547 (617)
.+|||+|||.|.++..|... . -.|.. ..+..+-++++--+..|. +.++.-+.+||+|.+..++.+. .
T Consensus 49 ~~vLDiG~G~G~~~~~l~~~--~-----~vD~s~~~~~~a~~~~~~~~~~d~-~~~~~~~~~fD~v~~~~~l~~~---~- 116 (219)
T 1vlm_A 49 GRGVEIGVGTGRFAVPLKIK--I-----GVEPSERMAEIARKRGVFVLKGTA-ENLPLKDESFDFALMVTTICFV---D- 116 (219)
T ss_dssp SCEEEETCTTSTTHHHHTCC--E-----EEESCHHHHHHHHHTTCEEEECBT-TBCCSCTTCEEEEEEESCGGGS---S-
T ss_pred CcEEEeCCCCCHHHHHHHHH--h-----ccCCCHHHHHHHHhcCCEEEEccc-ccCCCCCCCeeEEEEcchHhhc---c-
Confidence 58999999999999999887 1 22333 566667676542222232 2233223799999999888754 2
Q ss_pred CCChhhHHhhhhhcccCCceEEEecCh------------------------HHHHHHHhhhhcCCceEEEe
Q 039518 548 VCSLEDIMLEMDLIIRPQGFIIIRDEK------------------------SLITRIRDLAPKFLWDVELH 594 (617)
Q Consensus 548 ~c~~~~~l~e~dRilRP~G~~i~~d~~------------------------~~~~~~~~~~~~~~W~~~~~ 594 (617)
....+|-++-|+|+|||.+++.+.. -..+++++++...-++....
T Consensus 117 --~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Gf~~~~~ 185 (219)
T 1vlm_A 117 --DPERALKEAYRILKKGGYLIVGIVDRESFLGREYEKNKEKSVFYKNARFFSTEELMDLMRKAGFEEFKV 185 (219)
T ss_dssp --CHHHHHHHHHHHEEEEEEEEEEEECSSSHHHHHHHHTTTC-CCSTTCCCCCHHHHHHHHHHTTCEEEEE
T ss_pred --CHHHHHHHHHHHcCCCcEEEEEEeCCccHHHHHHHHHhcCcchhcccccCCHHHHHHHHHHCCCeEEEE
Confidence 3568999999999999999997321 12466777777777776443
No 338
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=97.74 E-value=3e-05 Score=77.42 Aligned_cols=96 Identities=15% Similarity=0.184 Sum_probs=65.0
Q ss_pred eeeEEeccccccchhhhccCCCeEEEEeccCCCC-chhHHHHhhcc-cccccccCCCCCCCCCccchhhccccccccccC
Q 039518 468 IRNAMDMNAYCGGFAVALNSLPVWVMNIVPISMK-NTLSAIYNRGI-LGAFHDWCEPFSTYPRTYDLLHANHLFSHYKNR 545 (617)
Q Consensus 468 ~Rn~mDm~~~~g~faa~l~~~~v~vmnv~p~~~~-~~l~~~~~RGl-ig~~~~~~~~f~typrtyDl~H~~~~~s~~~~~ 545 (617)
-.+|||+|||.|.++..|..... +|+-.|.. ..+..+-++.. .-+..|. +.++.-+.+||+|-+.+.+.++
T Consensus 55 ~~~vLDiGcG~G~~~~~l~~~~~---~v~gvD~s~~~l~~a~~~~~~~~~~~d~-~~~~~~~~~fD~v~~~~~~~~~--- 127 (260)
T 2avn_A 55 PCRVLDLGGGTGKWSLFLQERGF---EVVLVDPSKEMLEVAREKGVKNVVEAKA-EDLPFPSGAFEAVLALGDVLSY--- 127 (260)
T ss_dssp CCEEEEETCTTCHHHHHHHTTTC---EEEEEESCHHHHHHHHHHTCSCEEECCT-TSCCSCTTCEEEEEECSSHHHH---
T ss_pred CCeEEEeCCCcCHHHHHHHHcCC---eEEEEeCCHHHHHHHHhhcCCCEEECcH-HHCCCCCCCEEEEEEcchhhhc---
Confidence 35899999999999999987754 33334444 56666666643 1111122 2233213799999987755544
Q ss_pred CCCCChhhHHhhhhhcccCCceEEEec
Q 039518 546 GEVCSLEDIMLEMDLIIRPQGFIIIRD 572 (617)
Q Consensus 546 ~~~c~~~~~l~e~dRilRP~G~~i~~d 572 (617)
... ...+|-|+-|+|+|||.+++..
T Consensus 128 ~~~--~~~~l~~~~~~LkpgG~l~~~~ 152 (260)
T 2avn_A 128 VEN--KDKAFSEIRRVLVPDGLLIATV 152 (260)
T ss_dssp CSC--HHHHHHHHHHHEEEEEEEEEEE
T ss_pred ccc--HHHHHHHHHHHcCCCeEEEEEe
Confidence 222 7789999999999999999974
No 339
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=97.73 E-value=0.00014 Score=82.44 Aligned_cols=117 Identities=11% Similarity=0.146 Sum_probs=73.1
Q ss_pred HHHHHHHhhhhhccCC-cccCCCCeEEEECCCCcHH---HHHhccCCCcEEEeeecCCcHHHHHHHHH----hC--CCcE
Q 039518 208 EYIQRLGNMMTNETGN-LRSAGVFQVLDVGCGVASF---SAFLLPLDIQTMSFAPKDGHENQIQFALE----RG--IGAM 277 (617)
Q Consensus 208 ~Y~~~L~~~L~~~~~~-lr~~~g~rVLDIGCGtG~~---a~~La~~gv~~v~v~~iDis~~~lq~A~e----rg--~~~~ 277 (617)
.|.+.|.+.+...... -....+..|||||||+|.+ +...++++...+.|.++|-++.+ ..|++ ++ -.++
T Consensus 336 ~Ye~AI~~Al~d~~~~~~~~~~~~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp~A-~~a~~~v~~N~~~dkVt 414 (637)
T 4gqb_A 336 QYQQAIYKCLLDRVPEEEKDTNVQVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNPNA-VVTLENWQFEEWGSQVT 414 (637)
T ss_dssp HHHHHHHHHHHHHSCGGGTTTCEEEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCHHH-HHHHHHHHHHTTGGGEE
T ss_pred HHHHHHHHHHHHhhhhccccCCCcEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCHHH-HHHHHHHHhccCCCeEE
Confidence 4555565555332111 0112335699999999977 44444444445577777877644 34433 33 3488
Q ss_pred EEEecCCCCCCCCCCeeEEEecccccccc--cchHHHHHHHHHhccCCeEEE
Q 039518 278 ISALSTKQLPYPSSSFEMVHCSRCRVDWH--ANDGILLKEVDRVLRPNGYFV 327 (617)
Q Consensus 278 ~~~~d~~~Lpf~d~sFDlV~~s~~l~h~~--~d~~~~L~el~RvLrPGG~Li 327 (617)
+..++++++..| +.+|+|+|=. +-.+. +.....|....|.|||||.++
T Consensus 415 VI~gd~eev~LP-EKVDIIVSEw-MG~fLl~E~mlevL~Ardr~LKPgGimi 464 (637)
T 4gqb_A 415 VVSSDMREWVAP-EKADIIVSEL-LGSFADNELSPECLDGAQHFLKDDGVSI 464 (637)
T ss_dssp EEESCTTTCCCS-SCEEEEECCC-CBTTBGGGCHHHHHHHHGGGEEEEEEEE
T ss_pred EEeCcceeccCC-cccCEEEEEc-CcccccccCCHHHHHHHHHhcCCCcEEc
Confidence 899999998776 5699999631 21211 233367888899999999875
No 340
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=97.72 E-value=3.4e-05 Score=73.56 Aligned_cols=137 Identities=9% Similarity=0.062 Sum_probs=78.0
Q ss_pred eeEEeccccccchhhhccCCCeEEEEeccCCCC-chhHHHHhhc-----ccccccccCCCCCCCCCccchhhcccccccc
Q 039518 469 RNAMDMNAYCGGFAVALNSLPVWVMNIVPISMK-NTLSAIYNRG-----ILGAFHDWCEPFSTYPRTYDLLHANHLFSHY 542 (617)
Q Consensus 469 Rn~mDm~~~~g~faa~l~~~~v~vmnv~p~~~~-~~l~~~~~RG-----lig~~~~~~~~f~typrtyDl~H~~~~~s~~ 542 (617)
.+|||+|||.|.++..|.....- +|+-.|-. ..+..+-++. +--+..|..+ ++.-+.+||+|-+.++|...
T Consensus 44 ~~vLdiGcG~G~~~~~l~~~~~~--~v~~~D~s~~~~~~a~~~~~~~~~i~~~~~d~~~-~~~~~~~fD~v~~~~~~~~~ 120 (215)
T 2pxx_A 44 DRILVLGCGNSALSYELFLGGFP--NVTSVDYSSVVVAAMQACYAHVPQLRWETMDVRK-LDFPSASFDVVLEKGTLDAL 120 (215)
T ss_dssp CCEEEETCTTCSHHHHHHHTTCC--CEEEEESCHHHHHHHHHHTTTCTTCEEEECCTTS-CCSCSSCEEEEEEESHHHHH
T ss_pred CeEEEECCCCcHHHHHHHHcCCC--cEEEEeCCHHHHHHHHHhcccCCCcEEEEcchhc-CCCCCCcccEEEECcchhhh
Confidence 57999999999999988765321 22222333 4444444432 2112233332 22113799999988887643
Q ss_pred ccC-C--------CCCChhhHHhhhhhcccCCceEEEecChHHHHHHHhhh--hcCCceEEEeeccccCCCceeEEEEEe
Q 039518 543 KNR-G--------EVCSLEDIMLEMDLIIRPQGFIIIRDEKSLITRIRDLA--PKFLWDVELHSLENREKKMESVLICRK 611 (617)
Q Consensus 543 ~~~-~--------~~c~~~~~l~e~dRilRP~G~~i~~d~~~~~~~~~~~~--~~~~W~~~~~~~e~~~~~~~~~l~~~k 611 (617)
... . +.-....+|-|+-|+|+|||.+++.+....- ..+.+. ....|+......+++. .-.+.+++|
T Consensus 121 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 197 (215)
T 2pxx_A 121 LAGERDPWTVSSEGVHTVDQVLSEVSRVLVPGGRFISMTSAAPH-FRTRHYAQAYYGWSLRHATYGSGF--HFHLYLMHK 197 (215)
T ss_dssp TTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCHH-HHHHHHCCGGGCEEEEEEEESGGG--CEEEEEEEE
T ss_pred ccccccccccccchhHHHHHHHHHHHHhCcCCCEEEEEeCCCcH-HHHHHHhccccCcEEEEEEecCcc--eEEEEEEEe
Confidence 100 0 0113468999999999999999998653211 112222 4457877665443332 234556655
No 341
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=97.71 E-value=1.8e-05 Score=81.47 Aligned_cols=93 Identities=12% Similarity=0.020 Sum_probs=63.2
Q ss_pred eeeEEeccccccchhhhccCC-CeEEEEeccCCCC-chhHHHHh----hcccc----cccccCCCCCCCC-Cccchhhcc
Q 039518 468 IRNAMDMNAYCGGFAVALNSL-PVWVMNIVPISMK-NTLSAIYN----RGILG----AFHDWCEPFSTYP-RTYDLLHAN 536 (617)
Q Consensus 468 ~Rn~mDm~~~~g~faa~l~~~-~v~vmnv~p~~~~-~~l~~~~~----RGlig----~~~~~~~~f~typ-rtyDl~H~~ 536 (617)
-.+|||+|||.|.++..|.+. ..-| +-.|-. ..+..+-+ .|+-+ +..|.. .++ +| .+||+|.+.
T Consensus 118 ~~~vLDiGcG~G~~~~~la~~~~~~v---~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~-~~~-~~~~~fD~V~~~ 192 (312)
T 3vc1_A 118 DDTLVDAGCGRGGSMVMAHRRFGSRV---EGVTLSAAQADFGNRRARELRIDDHVRSRVCNML-DTP-FDKGAVTASWNN 192 (312)
T ss_dssp TCEEEEESCTTSHHHHHHHHHHCCEE---EEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTT-SCC-CCTTCEEEEEEE
T ss_pred CCEEEEecCCCCHHHHHHHHHcCCEE---EEEeCCHHHHHHHHHHHHHcCCCCceEEEECChh-cCC-CCCCCEeEEEEC
Confidence 368999999999999988765 3222 223333 45544444 34321 122332 233 34 899999998
Q ss_pred ccccccccCCCCCChhhHHhhhhhcccCCceEEEec
Q 039518 537 HLFSHYKNRGEVCSLEDIMLEMDLIIRPQGFIIIRD 572 (617)
Q Consensus 537 ~~~s~~~~~~~~c~~~~~l~e~dRilRP~G~~i~~d 572 (617)
.++.+. ....+|-|+-|+|||||.+++.+
T Consensus 193 ~~l~~~-------~~~~~l~~~~~~LkpgG~l~~~~ 221 (312)
T 3vc1_A 193 ESTMYV-------DLHDLFSEHSRFLKVGGRYVTIT 221 (312)
T ss_dssp SCGGGS-------CHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CchhhC-------CHHHHHHHHHHHcCCCcEEEEEE
Confidence 888753 27899999999999999999863
No 342
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=97.70 E-value=2.3e-05 Score=75.79 Aligned_cols=118 Identities=14% Similarity=0.103 Sum_probs=70.9
Q ss_pred hhHHHHHHHHHHhccCCCCCeeeEEeccccccchhhhccCC-CeEEEEeccCCCC-chhHHHHhh----cc-------c-
Q 039518 448 SFWQDQVRHYWQLMNVNETEIRNAMDMNAYCGGFAVALNSL-PVWVMNIVPISMK-NTLSAIYNR----GI-------L- 513 (617)
Q Consensus 448 ~~w~~~v~~y~~~~~~~~~~~Rn~mDm~~~~g~faa~l~~~-~v~vmnv~p~~~~-~~l~~~~~R----Gl-------i- 513 (617)
....++++...+.+....+ .+|||+|||.|.++.+|.+. +.. +|+-.|-. ..+..+-++ |+ +
T Consensus 12 ~~~~~~~~~l~~~l~~~~~--~~vLDiGcG~G~~~~~l~~~~~~~--~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~ 87 (217)
T 3jwh_A 12 SLNQQRMNGVVAALKQSNA--RRVIDLGCGQGNLLKILLKDSFFE--QITGVDVSYRSLEIAQERLDRLRLPRNQWERLQ 87 (217)
T ss_dssp CHHHHHHHHHHHHHHHTTC--CEEEEETCTTCHHHHHHHHCTTCS--EEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEE
T ss_pred CHHHHHHHHHHHHHHhcCC--CEEEEeCCCCCHHHHHHHhhCCCC--EEEEEECCHHHHHHHHHHHHHhcCCcccCcceE
Confidence 3444555544444443333 58999999999999999754 211 22223333 455555444 21 1
Q ss_pred ccccccCCCCCCCCCccchhhccccccccccCCCCCChhhHHhhhhhcccCCceEEEecCh
Q 039518 514 GAFHDWCEPFSTYPRTYDLLHANHLFSHYKNRGEVCSLEDIMLEMDLIIRPQGFIIIRDEK 574 (617)
Q Consensus 514 g~~~~~~~~f~typrtyDl~H~~~~~s~~~~~~~~c~~~~~l~e~dRilRP~G~~i~~d~~ 574 (617)
=+-.|. +..+.-+.+||+|-+..++.+. ..-.+..+|-++-|+|+|||.+++.+..
T Consensus 88 ~~~~d~-~~~~~~~~~fD~v~~~~~l~~~----~~~~~~~~l~~~~~~LkpgG~li~~~~~ 143 (217)
T 3jwh_A 88 LIQGAL-TYQDKRFHGYDAATVIEVIEHL----DLSRLGAFERVLFEFAQPKIVIVTTPNI 143 (217)
T ss_dssp EEECCT-TSCCGGGCSCSEEEEESCGGGC----CHHHHHHHHHHHHTTTCCSEEEEEEEBH
T ss_pred EEeCCc-ccccccCCCcCEEeeHHHHHcC----CHHHHHHHHHHHHHHcCCCEEEEEccCc
Confidence 111222 1112112699999999988854 2223457899999999999988886543
No 343
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=97.70 E-value=2.2e-05 Score=79.55 Aligned_cols=73 Identities=16% Similarity=0.116 Sum_probs=55.4
Q ss_pred CCCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcH-------HHHHHHHHh----CC--CcEEEEecCCCC-C-CCC--
Q 039518 228 GVFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHE-------NQIQFALER----GI--GAMISALSTKQL-P-YPS-- 290 (617)
Q Consensus 228 ~g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~-------~~lq~A~er----g~--~~~~~~~d~~~L-p-f~d-- 290 (617)
++.+|||+|||+|.++..|++.+. .++++|+++ .+++.|+++ ++ .+.+..+|+..+ + +++
T Consensus 83 ~~~~VLDlgcG~G~~a~~lA~~g~---~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~~~~ri~~~~~d~~~~l~~~~~~~ 159 (258)
T 2r6z_A 83 AHPTVWDATAGLGRDSFVLASLGL---TVTAFEQHPAVACLLSDGIRRALLNPETQDTAARINLHFGNAAEQMPALVKTQ 159 (258)
T ss_dssp GCCCEEETTCTTCHHHHHHHHTTC---CEEEEECCHHHHHHHHHHHHHHHHSHHHHHHHTTEEEEESCHHHHHHHHHHHH
T ss_pred CcCeEEEeeCccCHHHHHHHHhCC---EEEEEECChhhhHHHHHHHHHHHhHHHhhCCccCeEEEECCHHHHHHhhhccC
Confidence 456799999999999999998864 567889999 888888754 22 377888887653 3 344
Q ss_pred CCeeEEEeccccc
Q 039518 291 SSFEMVHCSRCRV 303 (617)
Q Consensus 291 ~sFDlV~~s~~l~ 303 (617)
++||+|++.-.+.
T Consensus 160 ~~fD~V~~dP~~~ 172 (258)
T 2r6z_A 160 GKPDIVYLDPMYP 172 (258)
T ss_dssp CCCSEEEECCCC-
T ss_pred CCccEEEECCCCC
Confidence 6899999875443
No 344
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=97.69 E-value=3.1e-05 Score=76.52 Aligned_cols=96 Identities=13% Similarity=0.215 Sum_probs=66.1
Q ss_pred CeeeEEeccccccchhhhccCCCeEEEEeccCCCC-chhHHHHhhc----ccccccccCCCCCCCCCccchhhccccccc
Q 039518 467 EIRNAMDMNAYCGGFAVALNSLPVWVMNIVPISMK-NTLSAIYNRG----ILGAFHDWCEPFSTYPRTYDLLHANHLFSH 541 (617)
Q Consensus 467 ~~Rn~mDm~~~~g~faa~l~~~~v~vmnv~p~~~~-~~l~~~~~RG----lig~~~~~~~~f~typrtyDl~H~~~~~s~ 541 (617)
.=.+|||+|||.|.++.+|.....- +|+-.|-. ..+..+-++. +--+..|. +.++.-+.+||+|.+..++.+
T Consensus 44 ~~~~vLD~GcG~G~~~~~l~~~~~~--~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~-~~~~~~~~~fD~v~~~~~l~~ 120 (253)
T 3g5l_A 44 NQKTVLDLGCGFGWHCIYAAEHGAK--KVLGIDLSERMLTEAKRKTTSPVVCYEQKAI-EDIAIEPDAYNVVLSSLALHY 120 (253)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTTCS--EEEEEESCHHHHHHHHHHCCCTTEEEEECCG-GGCCCCTTCEEEEEEESCGGG
T ss_pred CCCEEEEECCCCCHHHHHHHHcCCC--EEEEEECCHHHHHHHHHhhccCCeEEEEcch-hhCCCCCCCeEEEEEchhhhh
Confidence 3468999999999999999766431 33334443 5566665553 11122222 223322389999999998876
Q ss_pred cccCCCCCChhhHHhhhhhcccCCceEEEe
Q 039518 542 YKNRGEVCSLEDIMLEMDLIIRPQGFIIIR 571 (617)
Q Consensus 542 ~~~~~~~c~~~~~l~e~dRilRP~G~~i~~ 571 (617)
. -....+|-|+-|+|+|||.+++.
T Consensus 121 ~------~~~~~~l~~~~~~LkpgG~l~~~ 144 (253)
T 3g5l_A 121 I------ASFDDICKKVYINLKSSGSFIFS 144 (253)
T ss_dssp C------SCHHHHHHHHHHHEEEEEEEEEE
T ss_pred h------hhHHHHHHHHHHHcCCCcEEEEE
Confidence 4 23678999999999999999997
No 345
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=97.68 E-value=5.9e-05 Score=74.17 Aligned_cols=121 Identities=16% Similarity=0.186 Sum_probs=77.3
Q ss_pred eeeEEeccccccchhhhccCCCeEEEEeccCCCC-chhHHHHhhcc------ccc-ccccCCCCCCCCCccchhhccccc
Q 039518 468 IRNAMDMNAYCGGFAVALNSLPVWVMNIVPISMK-NTLSAIYNRGI------LGA-FHDWCEPFSTYPRTYDLLHANHLF 539 (617)
Q Consensus 468 ~Rn~mDm~~~~g~faa~l~~~~v~vmnv~p~~~~-~~l~~~~~RGl------ig~-~~~~~~~f~typrtyDl~H~~~~~ 539 (617)
-.+|||+|||.|.++.+|..... -+|+-.|-. ..+..+-++.- +-+ ..|. +.++.-+.+||+|.+..++
T Consensus 80 ~~~vLDiGcG~G~~~~~l~~~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~-~~~~~~~~~fD~v~~~~~l 156 (241)
T 2ex4_A 80 TSCALDCGAGIGRITKRLLLPLF--REVDMVDITEDFLVQAKTYLGEEGKRVRNYFCCGL-QDFTPEPDSYDVIWIQWVI 156 (241)
T ss_dssp CSEEEEETCTTTHHHHHTTTTTC--SEEEEEESCHHHHHHHHHHTGGGGGGEEEEEECCG-GGCCCCSSCEEEEEEESCG
T ss_pred CCEEEEECCCCCHHHHHHHHhcC--CEEEEEeCCHHHHHHHHHHhhhcCCceEEEEEcCh-hhcCCCCCCEEEEEEcchh
Confidence 46899999999999998877631 122333433 44444444421 111 1222 2233223689999999888
Q ss_pred cccccCCCCCChhhHHhhhhhcccCCceEEEecCh---------------HHHHHHHhhhhcCCceEEEee
Q 039518 540 SHYKNRGEVCSLEDIMLEMDLIIRPQGFIIIRDEK---------------SLITRIRDLAPKFLWDVELHS 595 (617)
Q Consensus 540 s~~~~~~~~c~~~~~l~e~dRilRP~G~~i~~d~~---------------~~~~~~~~~~~~~~W~~~~~~ 595 (617)
.+. .+ =.+..+|-|+-|+|+|||.+++.+.. ...+++++++...-++.....
T Consensus 157 ~~~---~~-~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~ 223 (241)
T 2ex4_A 157 GHL---TD-QHLAEFLRRCKGSLRPNGIIVIKDNMAQEGVILDDVDSSVCRDLDVVRRIICSAGLSLLAEE 223 (241)
T ss_dssp GGS---CH-HHHHHHHHHHHHHEEEEEEEEEEEEEBSSSEEEETTTTEEEEBHHHHHHHHHHTTCCEEEEE
T ss_pred hhC---CH-HHHHHHHHHHHHhcCCCeEEEEEEccCCCcceecccCCcccCCHHHHHHHHHHcCCeEEEee
Confidence 754 21 11357899999999999999996531 135677888877778765553
No 346
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=97.67 E-value=1.9e-05 Score=80.43 Aligned_cols=93 Identities=12% Similarity=0.056 Sum_probs=62.5
Q ss_pred CeeeEEeccccccchhhhcc---CCCeEEEEeccCCCC-chhHHHHhh-----ccccc----ccccCCCCCCCC------
Q 039518 467 EIRNAMDMNAYCGGFAVALN---SLPVWVMNIVPISMK-NTLSAIYNR-----GILGA----FHDWCEPFSTYP------ 527 (617)
Q Consensus 467 ~~Rn~mDm~~~~g~faa~l~---~~~v~vmnv~p~~~~-~~l~~~~~R-----Glig~----~~~~~~~f~typ------ 527 (617)
.-.+|||+|||.|.++..|. ....-|.-| |-. ..+..+-++ |...- ..|.. .++.-.
T Consensus 36 ~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gv---D~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~-~~~~~~~~~~~~ 111 (299)
T 3g5t_A 36 ERKLLVDVGCGPGTATLQMAQELKPFEQIIGS---DLSATMIKTAEVIKEGSPDTYKNVSFKISSSD-DFKFLGADSVDK 111 (299)
T ss_dssp CCSEEEEETCTTTHHHHHHHHHSSCCSEEEEE---ESCHHHHHHHHHHHHHCC-CCTTEEEEECCTT-CCGGGCTTTTTS
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCCCEEEEE---eCCHHHHHHHHHHHHhccCCCCceEEEEcCHH-hCCccccccccC
Confidence 45789999999999999998 444433333 333 555555554 32221 12222 222111
Q ss_pred CccchhhccccccccccCCCCCChhhHHhhhhhcccCCceEEE
Q 039518 528 RTYDLLHANHLFSHYKNRGEVCSLEDIMLEMDLIIRPQGFIII 570 (617)
Q Consensus 528 rtyDl~H~~~~~s~~~~~~~~c~~~~~l~e~dRilRP~G~~i~ 570 (617)
.+||+|++..++.+ . ....+|-|+-|+|||||.+++
T Consensus 112 ~~fD~V~~~~~l~~----~---~~~~~l~~~~~~LkpgG~l~i 147 (299)
T 3g5t_A 112 QKIDMITAVECAHW----F---DFEKFQRSAYANLRKDGTIAI 147 (299)
T ss_dssp SCEEEEEEESCGGG----S---CHHHHHHHHHHHEEEEEEEEE
T ss_pred CCeeEEeHhhHHHH----h---CHHHHHHHHHHhcCCCcEEEE
Confidence 69999999888763 2 678999999999999999998
No 347
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=97.67 E-value=4.9e-05 Score=74.25 Aligned_cols=100 Identities=14% Similarity=0.278 Sum_probs=55.3
Q ss_pred cCCCCCeeeEEeccccccchhhhccCC----CeEEEEeccCCCCchhHHHHhh-cccccccccCCC--CCCCCCccchhh
Q 039518 462 NVNETEIRNAMDMNAYCGGFAVALNSL----PVWVMNIVPISMKNTLSAIYNR-GILGAFHDWCEP--FSTYPRTYDLLH 534 (617)
Q Consensus 462 ~~~~~~~Rn~mDm~~~~g~faa~l~~~----~v~vmnv~p~~~~~~l~~~~~R-Glig~~~~~~~~--f~typrtyDl~H 534 (617)
++..+ .+|||+|||.|.++..|.+. .|.-+-+-|.--...+..+-++ ++.-+..|-.++ +..++.+||+|-
T Consensus 54 ~~~~g--~~VLDlGcGtG~~~~~la~~~~~~~V~gvD~s~~~l~~~~~~a~~~~~v~~~~~d~~~~~~~~~~~~~fD~V~ 131 (210)
T 1nt2_A 54 KLRGD--ERVLYLGAASGTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRERNNIIPLLFDASKPWKYSGIVEKVDLIY 131 (210)
T ss_dssp CCCSS--CEEEEETCTTSHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHHCSSEEEECSCTTCGGGTTTTCCCEEEEE
T ss_pred CCCCC--CEEEEECCcCCHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHhcCCCeEEEEcCCCCchhhcccccceeEEE
Confidence 34444 47999999999998876432 2333222111000012222222 233333444442 122358999998
Q ss_pred ccccccccccCCCCCChhhHHhhhhhcccCCceEEEe
Q 039518 535 ANHLFSHYKNRGEVCSLEDIMLEMDLIIRPQGFIIIR 571 (617)
Q Consensus 535 ~~~~~s~~~~~~~~c~~~~~l~e~dRilRP~G~~i~~ 571 (617)
++. . . .=....+|-|+-|+|||||.+++.
T Consensus 132 ~~~--~-----~-~~~~~~~l~~~~r~LkpgG~l~i~ 160 (210)
T 1nt2_A 132 QDI--A-----Q-KNQIEILKANAEFFLKEKGEVVIM 160 (210)
T ss_dssp ECC--C-----S-TTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred Eec--c-----C-hhHHHHHHHHHHHHhCCCCEEEEE
Confidence 651 1 1 111234588999999999999996
No 348
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=97.67 E-value=6.3e-05 Score=76.30 Aligned_cols=121 Identities=12% Similarity=0.080 Sum_probs=71.6
Q ss_pred CCCeEEEECCCCcHHHHHhccC-------CCc----EEEeeecC---CcHHHHHHH-----------HHh----------
Q 039518 228 GVFQVLDVGCGVASFSAFLLPL-------DIQ----TMSFAPKD---GHENQIQFA-----------LER---------- 272 (617)
Q Consensus 228 ~g~rVLDIGCGtG~~a~~La~~-------gv~----~v~v~~iD---is~~~lq~A-----------~er---------- 272 (617)
++.+|||||+|+|..+..+++. +.. .+.+..+| ++.+.++.| ++.
T Consensus 60 ~~~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~~p~~~~~l~~a~~~~p~l~~~a~~l~~~w~~~~~g 139 (257)
T 2qy6_A 60 PLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPG 139 (257)
T ss_dssp SEEEEEESCCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCSCSE
T ss_pred CCCEEEEECCChHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEECCcCCHHHHHHHHhcChhHHHHHHHHHHhccccccc
Confidence 4567999999999877765432 221 13444444 333444432 221
Q ss_pred ---------CCCcEEEEecCCC-CCCCC----CCeeEEEeccccccc-ccc--hHHHHHHHHHhccCCeEEEEEeCCCCC
Q 039518 273 ---------GIGAMISALSTKQ-LPYPS----SSFEMVHCSRCRVDW-HAN--DGILLKEVDRVLRPNGYFVYSAPPAYR 335 (617)
Q Consensus 273 ---------g~~~~~~~~d~~~-Lpf~d----~sFDlV~~s~~l~h~-~~d--~~~~L~el~RvLrPGG~Liis~p~~~~ 335 (617)
..++.+..+|+.+ ++..+ ..||+|+.-. +..- .++ ...++.++.++|+|||.|+.-+.
T Consensus 140 ~~r~~~~~~~~~l~l~~GDa~~~l~~~~~~~~~~~D~iflD~-fsp~~~p~lw~~~~l~~l~~~L~pGG~l~tysa---- 214 (257)
T 2qy6_A 140 CHRLLLDEGRVTLDLWFGDINELISQLDDSLNQKVDAWFLDG-FAPAKNPDMWTQNLFNAMARLARPGGTLATFTS---- 214 (257)
T ss_dssp EEEEEEC--CEEEEEEESCHHHHGGGSCGGGTTCEEEEEECS-SCTTTCGGGCCHHHHHHHHHHEEEEEEEEESCC----
T ss_pred hhheeccCCceEEEEEECcHHHHHhhcccccCCeEEEEEECC-CCcccChhhcCHHHHHHHHHHcCCCcEEEEEeC----
Confidence 1234566777544 44322 2799999631 1110 011 25799999999999999986221
Q ss_pred CCCCChhhHHHHHHHHHHcCceEEEE
Q 039518 336 KDKDYPLIWDKLVNLTTAMCWKLIAR 361 (617)
Q Consensus 336 ~~~~~~~~W~~le~La~~~gw~~v~~ 361 (617)
. ..+.+.+...||++...
T Consensus 215 ----a----~~vrr~L~~aGF~v~~~ 232 (257)
T 2qy6_A 215 ----A----GFVRRGLQEAGFTMQKR 232 (257)
T ss_dssp ----B----HHHHHHHHHHTEEEEEE
T ss_pred ----C----HHHHHHHHHCCCEEEeC
Confidence 1 23667777889997753
No 349
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=97.66 E-value=2e-05 Score=75.07 Aligned_cols=161 Identities=9% Similarity=0.033 Sum_probs=82.5
Q ss_pred cchhhHHHHHHHHHHhccCCCCCeeeEEeccccccchhhhccCC--C--eEEEEeccCCCCchhH-HHHhhcc--ccccc
Q 039518 445 TDTSFWQDQVRHYWQLMNVNETEIRNAMDMNAYCGGFAVALNSL--P--VWVMNIVPISMKNTLS-AIYNRGI--LGAFH 517 (617)
Q Consensus 445 ~d~~~w~~~v~~y~~~~~~~~~~~Rn~mDm~~~~g~faa~l~~~--~--v~vmnv~p~~~~~~l~-~~~~RGl--ig~~~ 517 (617)
.+++.+.+.+-.+... ... =.+|||+|||.|.++.+|.+. . |..+-+-|.--. ... .+-..|+ -=+..
T Consensus 12 ~~~~~~~~~~~~~l~~--~~~--~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~-~a~~~~~~~~~~~~~~~~ 86 (215)
T 4dzr_A 12 PDTEVLVEEAIRFLKR--MPS--GTRVIDVGTGSGCIAVSIALACPGVSVTAVDLSMDALA-VARRNAERFGAVVDWAAA 86 (215)
T ss_dssp HHHHHHHHHHHHHHTT--CCT--TEEEEEEESSBCHHHHHHHHHCTTEEEEEEECC--------------------CCHH
T ss_pred ccHHHHHHHHHHHhhh--cCC--CCEEEEecCCHhHHHHHHHHhCCCCeEEEEECCHHHHH-HHHHHHHHhCCceEEEEc
Confidence 3455565555444331 123 368999999999999888654 3 333322222111 111 1111121 12223
Q ss_pred ccCCCCCC---CCCccchhhcccccccccc------C----CCCCC----------hhhHHhhhhhcccCCce-EEEecC
Q 039518 518 DWCEPFST---YPRTYDLLHANHLFSHYKN------R----GEVCS----------LEDIMLEMDLIIRPQGF-IIIRDE 573 (617)
Q Consensus 518 ~~~~~f~t---yprtyDl~H~~~~~s~~~~------~----~~~c~----------~~~~l~e~dRilRP~G~-~i~~d~ 573 (617)
|+.++++. .+.+||+|-++--|..... . ..... +..++-++-|+|+|||+ +++.-.
T Consensus 87 d~~~~~~~~~~~~~~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 166 (215)
T 4dzr_A 87 DGIEWLIERAERGRPWHAIVSNPPYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLARGRAGVFLEVG 166 (215)
T ss_dssp HHHHHHHHHHHTTCCBSEEEECCCCCC------------------------CTTHHHHHHHTCCGGGBCSSSEEEEEECT
T ss_pred chHhhhhhhhhccCcccEEEECCCCCCCccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHHhcCCCeEEEEEEC
Confidence 44443331 2378999998644431100 0 00011 16788999999999999 777544
Q ss_pred hHHHHHHHhhhh--cCCceEEEeeccccCCCceeEEEEEec
Q 039518 574 KSLITRIRDLAP--KFLWDVELHSLENREKKMESVLICRKK 612 (617)
Q Consensus 574 ~~~~~~~~~~~~--~~~W~~~~~~~e~~~~~~~~~l~~~k~ 612 (617)
......+.+++. .-.|...... ....+.+++++++|.
T Consensus 167 ~~~~~~~~~~l~~~~~gf~~~~~~--~~~~~~~r~~~~~~~ 205 (215)
T 4dzr_A 167 HNQADEVARLFAPWRERGFRVRKV--KDLRGIDRVIAVTRE 205 (215)
T ss_dssp TSCHHHHHHHTGGGGGGTEECCEE--ECTTSCEEEEEEEEC
T ss_pred CccHHHHHHHHHHhhcCCceEEEE--EecCCCEEEEEEEEc
Confidence 444566667666 5556432221 122345888888874
No 350
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=97.66 E-value=9.5e-05 Score=67.53 Aligned_cols=134 Identities=11% Similarity=0.125 Sum_probs=75.0
Q ss_pred CCCCCeeeEEeccccccchhhhccCC-----CeEEEEeccCCCCchhHHHHhhcccccccccCCC---------CCCCCC
Q 039518 463 VNETEIRNAMDMNAYCGGFAVALNSL-----PVWVMNIVPISMKNTLSAIYNRGILGAFHDWCEP---------FSTYPR 528 (617)
Q Consensus 463 ~~~~~~Rn~mDm~~~~g~faa~l~~~-----~v~vmnv~p~~~~~~l~~~~~RGlig~~~~~~~~---------f~typr 528 (617)
+..+ .+|||+|||.|.++.+|.+. .|..+-+.| .-.. ..+--+..|..+. ++ +.
T Consensus 20 ~~~~--~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~--~~~~------~~~~~~~~d~~~~~~~~~~~~~~~--~~ 87 (180)
T 1ej0_A 20 FKPG--MTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP--MDPI------VGVDFLQGDFRDELVMKALLERVG--DS 87 (180)
T ss_dssp CCTT--CEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC--CCCC------TTEEEEESCTTSHHHHHHHHHHHT--TC
T ss_pred CCCC--CeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc--cccc------CcEEEEEcccccchhhhhhhccCC--CC
Confidence 4444 48999999999999888643 344444444 1111 1111122233221 22 37
Q ss_pred ccchhhccccccccccCCCC--CC------hhhHHhhhhhcccCCceEEEecCh-HHHHHHHhhhhcCCceEEEe--ecc
Q 039518 529 TYDLLHANHLFSHYKNRGEV--CS------LEDIMLEMDLIIRPQGFIIIRDEK-SLITRIRDLAPKFLWDVELH--SLE 597 (617)
Q Consensus 529 tyDl~H~~~~~s~~~~~~~~--c~------~~~~l~e~dRilRP~G~~i~~d~~-~~~~~~~~~~~~~~W~~~~~--~~e 597 (617)
+||+|.++..+... ... -. ...+|-++-|+|+|||.+++.... .....+.+.... .|+.... ...
T Consensus 88 ~~D~i~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 163 (180)
T 1ej0_A 88 KVQVVMSDMAPNMS---GTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVFQGEGFDEYLREIRS-LFTKVKVRKPDS 163 (180)
T ss_dssp CEEEEEECCCCCCC---SCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEESSTTHHHHHHHHHH-HEEEEEEECCTT
T ss_pred ceeEEEECCCcccc---CCCccchHHHHHHHHHHHHHHHHHcCCCcEEEEEEecCCcHHHHHHHHHH-hhhhEEeecCCc
Confidence 89999987776522 110 00 147889999999999999996321 122333333333 3654332 222
Q ss_pred ccCCCceeEEEEEec
Q 039518 598 NREKKMESVLICRKK 612 (617)
Q Consensus 598 ~~~~~~~~~l~~~k~ 612 (617)
......|..+++++.
T Consensus 164 ~~~~~~~~~~~~~~~ 178 (180)
T 1ej0_A 164 SRARSREVYIVATGR 178 (180)
T ss_dssp SCTTCCEEEEEEEEE
T ss_pred ccccCceEEEEEccC
Confidence 233455788888763
No 351
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=97.66 E-value=1.4e-05 Score=81.47 Aligned_cols=97 Identities=7% Similarity=0.161 Sum_probs=59.9
Q ss_pred eeeEEeccccccchhhh----ccC--CCeEEEEeccCCCC-chhHHHHhh-----cccccccccC----CCCC-----CC
Q 039518 468 IRNAMDMNAYCGGFAVA----LNS--LPVWVMNIVPISMK-NTLSAIYNR-----GILGAFHDWC----EPFS-----TY 526 (617)
Q Consensus 468 ~Rn~mDm~~~~g~faa~----l~~--~~v~vmnv~p~~~~-~~l~~~~~R-----Glig~~~~~~----~~f~-----ty 526 (617)
=..|||+|||.|.++.. |.. ..+-| .++=.|.. +-|..+-+| |+-.+--.|. +.++ .+
T Consensus 53 ~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v-~~~~vD~S~~ml~~a~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 131 (292)
T 2aot_A 53 EIKILSIGGGAGEIDLQILSKVQAQYPGVCI-NNEVVEPSAEQIAKYKELVAKTSNLENVKFAWHKETSSEYQSRMLEKK 131 (292)
T ss_dssp EEEEEEETCTTSHHHHHHHHHHHHHSTTCEE-EEEEECSCHHHHHHHHHHHHTCSSCTTEEEEEECSCHHHHHHHHHTTT
T ss_pred CCeEEEEcCCCCHHHHHHHHHHHhhCCCcee-eEEEEeCCHHHHHHHHHHHHhccCCCcceEEEEecchhhhhhhhcccc
Confidence 35799999999986543 322 23422 22333433 455555444 3322111121 1121 02
Q ss_pred -CCccchhhccccccccccCCCCCChhhHHhhhhhcccCCceEEEe
Q 039518 527 -PRTYDLLHANHLFSHYKNRGEVCSLEDIMLEMDLIIRPQGFIIIR 571 (617)
Q Consensus 527 -prtyDl~H~~~~~s~~~~~~~~c~~~~~l~e~dRilRP~G~~i~~ 571 (617)
+.+||+|++..++-+. . +....|-||-|+|+|||.+++.
T Consensus 132 ~~~~fD~V~~~~~l~~~---~---d~~~~l~~~~r~LkpgG~l~i~ 171 (292)
T 2aot_A 132 ELQKWDFIHMIQMLYYV---K---DIPATLKFFHSLLGTNAKMLII 171 (292)
T ss_dssp CCCCEEEEEEESCGGGC---S---CHHHHHHHHHHTEEEEEEEEEE
T ss_pred CCCceeEEEEeeeeeec---C---CHHHHHHHHHHHcCCCcEEEEE
Confidence 3899999999998865 2 3578999999999999999985
No 352
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=97.65 E-value=0.00011 Score=69.02 Aligned_cols=130 Identities=12% Similarity=0.108 Sum_probs=83.0
Q ss_pred eEEeccccccchhhhccCCCeEEEEeccCCCC-chhHHHHhhcccccccccCCCCCCCCCccchhhccccccccccC---
Q 039518 470 NAMDMNAYCGGFAVALNSLPVWVMNIVPISMK-NTLSAIYNRGILGAFHDWCEPFSTYPRTYDLLHANHLFSHYKNR--- 545 (617)
Q Consensus 470 n~mDm~~~~g~faa~l~~~~v~vmnv~p~~~~-~~l~~~~~RGlig~~~~~~~~f~typrtyDl~H~~~~~s~~~~~--- 545 (617)
.|||+|||.|.++.+|.... +|+-.|-. ..+.. ...+--+..|..++++ +.+||+|-++..|......
T Consensus 26 ~vLD~GcG~G~~~~~l~~~~----~v~gvD~s~~~~~~--~~~~~~~~~d~~~~~~--~~~fD~i~~n~~~~~~~~~~~~ 97 (170)
T 3q87_B 26 IVLDLGTSTGVITEQLRKRN----TVVSTDLNIRALES--HRGGNLVRADLLCSIN--QESVDVVVFNPPYVPDTDDPII 97 (170)
T ss_dssp EEEEETCTTCHHHHHHTTTS----EEEEEESCHHHHHT--CSSSCEEECSTTTTBC--GGGCSEEEECCCCBTTCCCTTT
T ss_pred eEEEeccCccHHHHHHHhcC----cEEEEECCHHHHhc--ccCCeEEECChhhhcc--cCCCCEEEECCCCccCCccccc
Confidence 89999999999999998876 55555554 33333 2233333445555443 2899999988776532100
Q ss_pred CCCCChhhHHhhhhhcccCCceEEEec-ChHHHHHHHhhhhcCCceEEEeeccccCCCceeEEEEE
Q 039518 546 GEVCSLEDIMLEMDLIIRPQGFIIIRD-EKSLITRIRDLAPKFLWDVELHSLENREKKMESVLICR 610 (617)
Q Consensus 546 ~~~c~~~~~l~e~dRilRP~G~~i~~d-~~~~~~~~~~~~~~~~W~~~~~~~e~~~~~~~~~l~~~ 610 (617)
........++-++=|.| |||.+++.. .....+++.++++...|+.......... .|++++.+
T Consensus 98 ~~~~~~~~~~~~~~~~l-pgG~l~~~~~~~~~~~~l~~~l~~~gf~~~~~~~~~~~--~e~~~~~~ 160 (170)
T 3q87_B 98 GGGYLGREVIDRFVDAV-TVGMLYLLVIEANRPKEVLARLEERGYGTRILKVRKIL--GETVYIIK 160 (170)
T ss_dssp BCCGGGCHHHHHHHHHC-CSSEEEEEEEGGGCHHHHHHHHHHTTCEEEEEEEEECS--SSEEEEEE
T ss_pred cCCcchHHHHHHHHhhC-CCCEEEEEEecCCCHHHHHHHHHHCCCcEEEEEeeccC--CceEEEEE
Confidence 01112235667777777 999999975 3455678888888888987666543333 36666554
No 353
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=97.64 E-value=2e-05 Score=81.77 Aligned_cols=71 Identities=13% Similarity=0.051 Sum_probs=52.1
Q ss_pred CCCCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHhC----CCcEEEEecCCCCCC--C---CCCeeEEE
Q 039518 227 AGVFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALERG----IGAMISALSTKQLPY--P---SSSFEMVH 297 (617)
Q Consensus 227 ~~g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~erg----~~~~~~~~d~~~Lpf--~---d~sFDlV~ 297 (617)
.++.+|||+|||+|.++..++++.. ...+.++|.++.+++.|+++. .++.+..+|+..++. . .++||.|+
T Consensus 25 ~~g~~vLD~g~G~G~~s~~la~~~~-~~~VigvD~d~~al~~A~~~~~~~g~~v~~v~~d~~~l~~~l~~~g~~~~D~Vl 103 (301)
T 1m6y_A 25 EDEKIILDCTVGEGGHSRAILEHCP-GCRIIGIDVDSEVLRIAEEKLKEFSDRVSLFKVSYREADFLLKTLGIEKVDGIL 103 (301)
T ss_dssp CTTCEEEETTCTTSHHHHHHHHHCT-TCEEEEEESCHHHHHHHHHHTGGGTTTEEEEECCGGGHHHHHHHTTCSCEEEEE
T ss_pred CCCCEEEEEeCCcCHHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCHHHHHHHHHhcCCCCCCEEE
Confidence 4566799999999999999998743 237888999999999999863 346666666655541 1 14577776
Q ss_pred e
Q 039518 298 C 298 (617)
Q Consensus 298 ~ 298 (617)
+
T Consensus 104 ~ 104 (301)
T 1m6y_A 104 M 104 (301)
T ss_dssp E
T ss_pred E
Confidence 4
No 354
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=97.63 E-value=8.7e-05 Score=75.17 Aligned_cols=64 Identities=13% Similarity=0.164 Sum_probs=45.0
Q ss_pred CccchhhccccccccccCCCC-CChhhHHhhhhhcccCCceEEEecC----------------hHHHHHHHhhhhcCCce
Q 039518 528 RTYDLLHANHLFSHYKNRGEV-CSLEDIMLEMDLIIRPQGFIIIRDE----------------KSLITRIRDLAPKFLWD 590 (617)
Q Consensus 528 rtyDl~H~~~~~s~~~~~~~~-c~~~~~l~e~dRilRP~G~~i~~d~----------------~~~~~~~~~~~~~~~W~ 590 (617)
.+||+|-+..+|... ... -....+|-|+-|+|||||++++.+. .-..+++++++..--++
T Consensus 173 ~~fD~V~~~~~l~~~---~~~~~~~~~~l~~~~r~LkpGG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~ 249 (289)
T 2g72_A 173 LPADALVSAFCLEAV---SPDLASFQRALDHITTLLRPGGHLLLIGALEESWYLAGEARLTVVPVSEEEVREALVRSGYK 249 (289)
T ss_dssp SSEEEEEEESCHHHH---CSSHHHHHHHHHHHHTTEEEEEEEEEEEEESCCEEEETTEEEECCCCCHHHHHHHHHHTTEE
T ss_pred CCCCEEEehhhhhhh---cCCHHHHHHHHHHHHHhcCCCCEEEEEEecCcceEEcCCeeeeeccCCHHHHHHHHHHcCCe
Confidence 689999999888753 221 2456899999999999999998621 01346677777666666
Q ss_pred EEEe
Q 039518 591 VELH 594 (617)
Q Consensus 591 ~~~~ 594 (617)
....
T Consensus 250 ~~~~ 253 (289)
T 2g72_A 250 VRDL 253 (289)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 5443
No 355
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=97.63 E-value=2.2e-05 Score=79.98 Aligned_cols=94 Identities=11% Similarity=0.160 Sum_probs=61.5
Q ss_pred eEEeccccccchhhhccCCCeEEEEeccCCCC-chhHHHHhh----cc-----c-ccccccCCCCCCCCCccchhhcc-c
Q 039518 470 NAMDMNAYCGGFAVALNSLPVWVMNIVPISMK-NTLSAIYNR----GI-----L-GAFHDWCEPFSTYPRTYDLLHAN-H 537 (617)
Q Consensus 470 n~mDm~~~~g~faa~l~~~~v~vmnv~p~~~~-~~l~~~~~R----Gl-----i-g~~~~~~~~f~typrtyDl~H~~-~ 537 (617)
+|||+|||.|.++..|.+... +|+-.|-. ..+..+-++ |+ + -+..|..+ ++. +.+||+|.+. .
T Consensus 85 ~vLDlGcG~G~~~~~l~~~~~---~v~gvD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~-~~~-~~~fD~v~~~~~ 159 (299)
T 3g2m_A 85 PVLELAAGMGRLTFPFLDLGW---EVTALELSTSVLAAFRKRLAEAPADVRDRCTLVQGDMSA-FAL-DKRFGTVVISSG 159 (299)
T ss_dssp CEEEETCTTTTTHHHHHTTTC---CEEEEESCHHHHHHHHHHHHTSCHHHHTTEEEEECBTTB-CCC-SCCEEEEEECHH
T ss_pred cEEEEeccCCHHHHHHHHcCC---eEEEEECCHHHHHHHHHHHhhcccccccceEEEeCchhc-CCc-CCCcCEEEECCc
Confidence 799999999999999988754 23333443 555555444 11 1 12223332 343 7999998854 3
Q ss_pred cccccccCCCCCChhhHHhhhhhcccCCceEEEec
Q 039518 538 LFSHYKNRGEVCSLEDIMLEMDLIIRPQGFIIIRD 572 (617)
Q Consensus 538 ~~s~~~~~~~~c~~~~~l~e~dRilRP~G~~i~~d 572 (617)
++. + .+.-....+|-|+-|+|||||.+++..
T Consensus 160 ~~~-~---~~~~~~~~~l~~~~~~L~pgG~l~~~~ 190 (299)
T 3g2m_A 160 SIN-E---LDEADRRGLYASVREHLEPGGKFLLSL 190 (299)
T ss_dssp HHT-T---SCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ccc-c---CCHHHHHHHHHHHHHHcCCCcEEEEEe
Confidence 343 2 222235689999999999999999973
No 356
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=97.62 E-value=8.6e-05 Score=85.50 Aligned_cols=104 Identities=18% Similarity=0.120 Sum_probs=71.2
Q ss_pred CCCeEEEECCCCcHHHHHhccCCC-----------------------------------------cEEEeeecCCcHHHH
Q 039518 228 GVFQVLDVGCGVASFSAFLLPLDI-----------------------------------------QTMSFAPKDGHENQI 266 (617)
Q Consensus 228 ~g~rVLDIGCGtG~~a~~La~~gv-----------------------------------------~~v~v~~iDis~~~l 266 (617)
++.+|||.+||+|.++..++.... ....+.++|+++.++
T Consensus 190 ~~~~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~ea~~~~~~~~~~~~~~i~G~Did~~av 269 (703)
T 3v97_A 190 PGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLAEYSSHFYGSDSDARVI 269 (703)
T ss_dssp TTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEESCHHHH
T ss_pred CCCeEEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHHHHHHhhhccccCCccEEEEECCHHHH
Confidence 455699999999999877664310 013688999999999
Q ss_pred HHHHHh----CCC--cEEEEecCCCCC--CCCCCeeEEEecccccc-cc--cchHHH---HHHHHHhccCCeEEEEEeC
Q 039518 267 QFALER----GIG--AMISALSTKQLP--YPSSSFEMVHCSRCRVD-WH--ANDGIL---LKEVDRVLRPNGYFVYSAP 331 (617)
Q Consensus 267 q~A~er----g~~--~~~~~~d~~~Lp--f~d~sFDlV~~s~~l~h-~~--~d~~~~---L~el~RvLrPGG~Liis~p 331 (617)
+.|+++ |+. +.+..+|+.++. ..+++||+|+++--... +. .+...+ |.++.+.+.|||.+++.++
T Consensus 270 ~~A~~N~~~agv~~~i~~~~~D~~~~~~~~~~~~~d~Iv~NPPYG~Rlg~~~~l~~ly~~l~~~lk~~~~g~~~~ilt~ 348 (703)
T 3v97_A 270 QRARTNARLAGIGELITFEVKDVAQLTNPLPKGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSA 348 (703)
T ss_dssp HHHHHHHHHTTCGGGEEEEECCGGGCCCSCTTCCCCEEEECCCCCC---CCHHHHHHHHHHHHHHHHHCTTCEEEEEES
T ss_pred HHHHHHHHHcCCCCceEEEECChhhCccccccCCCCEEEeCCCccccccchhHHHHHHHHHHHHHHhhCCCCeEEEEeC
Confidence 999876 554 688888987773 33448999999842211 11 122333 4555556668999999765
No 357
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=97.60 E-value=9.2e-05 Score=82.84 Aligned_cols=103 Identities=14% Similarity=0.084 Sum_probs=72.3
Q ss_pred eEEEECCCCcHHHHHhccCC------C--------cEEEeeecCCcHHHHHHHHHh----CCCcEE--EEecCCCCC-CC
Q 039518 231 QVLDVGCGVASFSAFLLPLD------I--------QTMSFAPKDGHENQIQFALER----GIGAMI--SALSTKQLP-YP 289 (617)
Q Consensus 231 rVLDIGCGtG~~a~~La~~g------v--------~~v~v~~iDis~~~lq~A~er----g~~~~~--~~~d~~~Lp-f~ 289 (617)
+|||.+||+|.|...+++.- . ....+.+.|+++.+++.|+.+ |+...+ ..+|+...+ ++
T Consensus 247 ~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~~~i~i~~gDtL~~~~~~ 326 (544)
T 3khk_A 247 RVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKLAAMNMVIRGIDFNFGKKNADSFLDDQHP 326 (544)
T ss_dssp EEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHHHHHHHHHHHTTCCCBCCSSSCCTTTSCSCT
T ss_pred eEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHHHHHHHHHHHhCCCcccceeccchhcCcccc
Confidence 79999999999887764320 0 134789999999999998864 554433 556654333 45
Q ss_pred CCCeeEEEecccccc--ccc--------------------------chHHHHHHHHHhccCCeEEEEEeCCC
Q 039518 290 SSSFEMVHCSRCRVD--WHA--------------------------NDGILLKEVDRVLRPNGYFVYSAPPA 333 (617)
Q Consensus 290 d~sFDlV~~s~~l~h--~~~--------------------------d~~~~L~el~RvLrPGG~Liis~p~~ 333 (617)
+..||+|+++--+.. |.. ..-.++..+.+.|+|||++++..|..
T Consensus 327 ~~~fD~Iv~NPPf~~~~~~~~~~~~d~r~~~g~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~aiVlP~g 398 (544)
T 3khk_A 327 DLRADFVMTNPPFNMKDWWHEKLADDPRWTINTNGEKRILTPPTGNANFAWMLHMLYHLAPTGSMALLLANG 398 (544)
T ss_dssp TCCEEEEEECCCSSCCSCCCGGGTTCGGGEECCC--CEECCCCTTCTHHHHHHHHHHTEEEEEEEEEEEETH
T ss_pred cccccEEEECCCcCCccccchhhhhhhhhhcCcccccccccCCCcchhHHHHHHHHHHhccCceEEEEecch
Confidence 678999999743221 110 01258899999999999999998743
No 358
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=97.60 E-value=7.2e-05 Score=72.24 Aligned_cols=132 Identities=11% Similarity=0.152 Sum_probs=80.2
Q ss_pred HHHHHHhccCCCCCeeeEEeccccccchhhhccCCCeEEEEeccCCCC-chhHHHHhh-cc--------------ccccc
Q 039518 454 VRHYWQLMNVNETEIRNAMDMNAYCGGFAVALNSLPVWVMNIVPISMK-NTLSAIYNR-GI--------------LGAFH 517 (617)
Q Consensus 454 v~~y~~~~~~~~~~~Rn~mDm~~~~g~faa~l~~~~v~vmnv~p~~~~-~~l~~~~~R-Gl--------------ig~~~ 517 (617)
+..|...+++..+ ..|||+|||.|.++..|.++.. .|+-.|-. .-|..+-+| ++ ..-..
T Consensus 11 l~~~~~~l~~~~~--~~vLD~GCG~G~~~~~la~~g~---~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~ 85 (203)
T 1pjz_A 11 LQQYWSSLNVVPG--ARVLVPLCGKSQDMSWLSGQGY---HVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIE 85 (203)
T ss_dssp HHHHHHHHCCCTT--CEEEETTTCCSHHHHHHHHHCC---EEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSE
T ss_pred HHHHHHhcccCCC--CEEEEeCCCCcHhHHHHHHCCC---eEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccE
Confidence 3445555555554 4799999999999999987653 34444544 556666655 11 01111
Q ss_pred ccCCCCCCCC----CccchhhccccccccccCCCCCChhhHHhhhhhcccCCceE-EE-ecCh----------HHHHHHH
Q 039518 518 DWCEPFSTYP----RTYDLLHANHLFSHYKNRGEVCSLEDIMLEMDLIIRPQGFI-II-RDEK----------SLITRIR 581 (617)
Q Consensus 518 ~~~~~f~typ----rtyDl~H~~~~~s~~~~~~~~c~~~~~l~e~dRilRP~G~~-i~-~d~~----------~~~~~~~ 581 (617)
-.|.-+...| .+||+|-+..+|.+. ..-....++-||-|+|||||.+ ++ -+.. -..++++
T Consensus 86 ~~~~d~~~l~~~~~~~fD~v~~~~~l~~l----~~~~~~~~l~~~~r~LkpgG~~~l~~~~~~~~~~~~~~~~~~~~el~ 161 (203)
T 1pjz_A 86 IWCGDFFALTARDIGHCAAFYDRAAMIAL----PADMRERYVQHLEALMPQACSGLLITLEYDQALLEGPPFSVPQTWLH 161 (203)
T ss_dssp EEEECCSSSTHHHHHSEEEEEEESCGGGS----CHHHHHHHHHHHHHHSCSEEEEEEEEESSCSSSSSSCCCCCCHHHHH
T ss_pred EEECccccCCcccCCCEEEEEECcchhhC----CHHHHHHHHHHHHHHcCCCcEEEEEEEecCccccCCCCCCCCHHHHH
Confidence 1122233333 689999887777643 1222346889999999999983 33 2211 1246788
Q ss_pred hhhhcCCceEEEee
Q 039518 582 DLAPKFLWDVELHS 595 (617)
Q Consensus 582 ~~~~~~~W~~~~~~ 595 (617)
++... .|++....
T Consensus 162 ~~~~~-gf~i~~~~ 174 (203)
T 1pjz_A 162 RVMSG-NWEVTKVG 174 (203)
T ss_dssp HTSCS-SEEEEEEE
T ss_pred HHhcC-CcEEEEec
Confidence 88877 78765543
No 359
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=97.59 E-value=9.9e-05 Score=74.08 Aligned_cols=156 Identities=8% Similarity=0.003 Sum_probs=88.4
Q ss_pred cchhhHHHHHHHHHHhcc-CCCCCeeeEEeccccccchhhhccC--CCeEEEEeccCCCCchhHHHH----hhcc--ccc
Q 039518 445 TDTSFWQDQVRHYWQLMN-VNETEIRNAMDMNAYCGGFAVALNS--LPVWVMNIVPISMKNTLSAIY----NRGI--LGA 515 (617)
Q Consensus 445 ~d~~~w~~~v~~y~~~~~-~~~~~~Rn~mDm~~~~g~faa~l~~--~~v~vmnv~p~~~~~~l~~~~----~RGl--ig~ 515 (617)
...+.|.+++-.-..++. +....-.+|||+|||.|.++..|.. ...-|.-|=+.. ..+.++- +-|+ +-+
T Consensus 57 ~~~~~~~~~~~ds~~~l~~~~~~~~~~vLDiG~G~G~~~i~la~~~~~~~v~~vD~s~--~~~~~a~~~~~~~~l~~v~~ 134 (249)
T 3g89_A 57 GEEEVVVKHFLDSLTLLRLPLWQGPLRVLDLGTGAGFPGLPLKIVRPELELVLVDATR--KKVAFVERAIEVLGLKGARA 134 (249)
T ss_dssp CHHHHHHHHHHHHHGGGGSSCCCSSCEEEEETCTTTTTHHHHHHHCTTCEEEEEESCH--HHHHHHHHHHHHHTCSSEEE
T ss_pred CHHHHhhceeeechhhhcccccCCCCEEEEEcCCCCHHHHHHHHHCCCCEEEEEECCH--HHHHHHHHHHHHhCCCceEE
Confidence 344667665543333332 2223346899999999988776643 233333332222 3333332 2355 333
Q ss_pred ccccCCCCC---CCCCccchhhccccccccccCCCCCChhhHHhhhhhcccCCceEEEec---ChHHHHHHHhhhhcCCc
Q 039518 516 FHDWCEPFS---TYPRTYDLLHANHLFSHYKNRGEVCSLEDIMLEMDLIIRPQGFIIIRD---EKSLITRIRDLAPKFLW 589 (617)
Q Consensus 516 ~~~~~~~f~---typrtyDl~H~~~~~s~~~~~~~~c~~~~~l~e~dRilRP~G~~i~~d---~~~~~~~~~~~~~~~~W 589 (617)
+|.--+.++ .++.+||+|-+..+ ..+..++-++-|+|+|||.+++-. ..+.+..+++.++.+.+
T Consensus 135 ~~~d~~~~~~~~~~~~~fD~I~s~a~----------~~~~~ll~~~~~~LkpgG~l~~~~g~~~~~e~~~~~~~l~~~G~ 204 (249)
T 3g89_A 135 LWGRAEVLAREAGHREAYARAVARAV----------APLCVLSELLLPFLEVGGAAVAMKGPRVEEELAPLPPALERLGG 204 (249)
T ss_dssp EECCHHHHTTSTTTTTCEEEEEEESS----------CCHHHHHHHHGGGEEEEEEEEEEECSCCHHHHTTHHHHHHHHTE
T ss_pred EECcHHHhhcccccCCCceEEEECCc----------CCHHHHHHHHHHHcCCCeEEEEEeCCCcHHHHHHHHHHHHHcCC
Confidence 333223333 24579999985432 245688889999999999988743 45667777777777788
Q ss_pred eEEEee-c-cccCCCceeEEEEEec
Q 039518 590 DVELHS-L-ENREKKMESVLICRKK 612 (617)
Q Consensus 590 ~~~~~~-~-e~~~~~~~~~l~~~k~ 612 (617)
+..... . -.+....-.+++.+|.
T Consensus 205 ~~~~~~~~~~p~~~~~R~l~~~~k~ 229 (249)
T 3g89_A 205 RLGEVLALQLPLSGEARHLVVLEKT 229 (249)
T ss_dssp EEEEEEEEECTTTCCEEEEEEEEEC
T ss_pred eEEEEEEeeCCCCCCcEEEEEEEeC
Confidence 764432 1 1122233445566664
No 360
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=97.59 E-value=3.7e-05 Score=75.84 Aligned_cols=96 Identities=15% Similarity=0.247 Sum_probs=60.5
Q ss_pred eeeEEeccccccchhhhccCCCeEEEEeccCCCC-chhHHHHhh----cc-cc-cccccCCCCCCCCCccchhhcccccc
Q 039518 468 IRNAMDMNAYCGGFAVALNSLPVWVMNIVPISMK-NTLSAIYNR----GI-LG-AFHDWCEPFSTYPRTYDLLHANHLFS 540 (617)
Q Consensus 468 ~Rn~mDm~~~~g~faa~l~~~~v~vmnv~p~~~~-~~l~~~~~R----Gl-ig-~~~~~~~~f~typrtyDl~H~~~~~s 540 (617)
-.+|||+|||.|.++..|.+... +|+-.|-. ..+..+-++ |+ +- +-.|..+ ++ .+.+||+|.+....-
T Consensus 42 ~~~vLDlGcG~G~~~~~l~~~~~---~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~-~~-~~~~fD~v~~~~~~~ 116 (252)
T 1wzn_A 42 VRRVLDLACGTGIPTLELAERGY---EVVGLDLHEEMLRVARRKAKERNLKIEFLQGDVLE-IA-FKNEFDAVTMFFSTI 116 (252)
T ss_dssp CCEEEEETCTTCHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHHHTTCCCEEEESCGGG-CC-CCSCEEEEEECSSGG
T ss_pred CCEEEEeCCCCCHHHHHHHHCCC---eEEEEECCHHHHHHHHHHHHhcCCceEEEECChhh-cc-cCCCccEEEEcCCch
Confidence 46899999999999999987654 34444544 455444433 32 11 1223322 22 357899998642221
Q ss_pred ccccCCCCCChhhHHhhhhhcccCCceEEEe
Q 039518 541 HYKNRGEVCSLEDIMLEMDLIIRPQGFIIIR 571 (617)
Q Consensus 541 ~~~~~~~~c~~~~~l~e~dRilRP~G~~i~~ 571 (617)
.+ .+.=....+|-++-|+|+|||.+|+.
T Consensus 117 ~~---~~~~~~~~~l~~~~~~L~pgG~li~~ 144 (252)
T 1wzn_A 117 MY---FDEEDLRKLFSKVAEALKPGGVFITD 144 (252)
T ss_dssp GG---SCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred hc---CCHHHHHHHHHHHHHHcCCCeEEEEe
Confidence 22 11123457899999999999999985
No 361
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=97.58 E-value=2.4e-05 Score=76.34 Aligned_cols=95 Identities=13% Similarity=0.179 Sum_probs=65.2
Q ss_pred eeeEEeccccccchhhhccCCCe-EEEEeccCCCC-chhHHHHhhc----ccccccccCCCCCCCCCccchhhccccccc
Q 039518 468 IRNAMDMNAYCGGFAVALNSLPV-WVMNIVPISMK-NTLSAIYNRG----ILGAFHDWCEPFSTYPRTYDLLHANHLFSH 541 (617)
Q Consensus 468 ~Rn~mDm~~~~g~faa~l~~~~v-~vmnv~p~~~~-~~l~~~~~RG----lig~~~~~~~~f~typrtyDl~H~~~~~s~ 541 (617)
-.+|||+|||.|.++..|.+.+. -|.- .|-. ..+..+-++. +--+..|..+ ++.-+.+||+|.+..++.+
T Consensus 44 ~~~vLdiG~G~G~~~~~l~~~~~~~v~~---vD~s~~~~~~a~~~~~~~~~~~~~~d~~~-~~~~~~~fD~v~~~~~l~~ 119 (243)
T 3bkw_A 44 GLRIVDLGCGFGWFCRWAHEHGASYVLG---LDLSEKMLARARAAGPDTGITYERADLDK-LHLPQDSFDLAYSSLALHY 119 (243)
T ss_dssp TCEEEEETCTTCHHHHHHHHTTCSEEEE---EESCHHHHHHHHHTSCSSSEEEEECCGGG-CCCCTTCEEEEEEESCGGG
T ss_pred CCEEEEEcCcCCHHHHHHHHCCCCeEEE---EcCCHHHHHHHHHhcccCCceEEEcChhh-ccCCCCCceEEEEeccccc
Confidence 36899999999999999977654 2332 2333 5555555553 2112223322 3322479999999988875
Q ss_pred cccCCCCCChhhHHhhhhhcccCCceEEEec
Q 039518 542 YKNRGEVCSLEDIMLEMDLIIRPQGFIIIRD 572 (617)
Q Consensus 542 ~~~~~~~c~~~~~l~e~dRilRP~G~~i~~d 572 (617)
. . ....+|-++-|+|+|||.+++..
T Consensus 120 ~---~---~~~~~l~~~~~~L~pgG~l~~~~ 144 (243)
T 3bkw_A 120 V---E---DVARLFRTVHQALSPGGHFVFST 144 (243)
T ss_dssp C---S---CHHHHHHHHHHHEEEEEEEEEEE
T ss_pred c---c---hHHHHHHHHHHhcCcCcEEEEEe
Confidence 4 2 46789999999999999999974
No 362
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=97.58 E-value=5.1e-05 Score=73.24 Aligned_cols=115 Identities=16% Similarity=0.272 Sum_probs=70.0
Q ss_pred hHHHHHHHHHHhcc--CCCCCeeeEEeccccccchhhhccCCCeEEEEeccCCCC-chhHHHHhh----c--cccccccc
Q 039518 449 FWQDQVRHYWQLMN--VNETEIRNAMDMNAYCGGFAVALNSLPVWVMNIVPISMK-NTLSAIYNR----G--ILGAFHDW 519 (617)
Q Consensus 449 ~w~~~v~~y~~~~~--~~~~~~Rn~mDm~~~~g~faa~l~~~~v~vmnv~p~~~~-~~l~~~~~R----G--lig~~~~~ 519 (617)
.+..+.+...+.+. +.. -.+|||+|||.|.++..|....- +|+-.|-. ..+..+-++ | +--+..|.
T Consensus 20 ~~~~~~~~~~~~l~~~~~~--~~~vLDlG~G~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~ 94 (227)
T 1ve3_A 20 EYRSRIETLEPLLMKYMKK--RGKVLDLACGVGGFSFLLEDYGF---EVVGVDISEDMIRKAREYAKSRESNVEFIVGDA 94 (227)
T ss_dssp HHHHHHHHHHHHHHHSCCS--CCEEEEETCTTSHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHHHTTCCCEEEECCT
T ss_pred HHHHHHHHHHHHHHHhcCC--CCeEEEEeccCCHHHHHHHHcCC---EEEEEECCHHHHHHHHHHHHhcCCCceEEECch
Confidence 34444444444332 333 35899999999999988876543 33444443 445444443 1 21222333
Q ss_pred CCCCCCCCCccchhhccccccccccCCCCCChhhHHhhhhhcccCCceEEEecC
Q 039518 520 CEPFSTYPRTYDLLHANHLFSHYKNRGEVCSLEDIMLEMDLIIRPQGFIIIRDE 573 (617)
Q Consensus 520 ~~~f~typrtyDl~H~~~~~s~~~~~~~~c~~~~~l~e~dRilRP~G~~i~~d~ 573 (617)
.+ ++.-+.+||+|.+..++..+ +.-....+|-++-|+|+|||.+++.+.
T Consensus 95 ~~-~~~~~~~~D~v~~~~~~~~~----~~~~~~~~l~~~~~~L~~gG~l~~~~~ 143 (227)
T 1ve3_A 95 RK-LSFEDKTFDYVIFIDSIVHF----EPLELNQVFKEVRRVLKPSGKFIMYFT 143 (227)
T ss_dssp TS-CCSCTTCEEEEEEESCGGGC----CHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred hc-CCCCCCcEEEEEEcCchHhC----CHHHHHHHHHHHHHHcCCCcEEEEEec
Confidence 33 22113799999988874432 112345789999999999999999754
No 363
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=97.56 E-value=5.5e-05 Score=72.02 Aligned_cols=113 Identities=12% Similarity=0.179 Sum_probs=71.7
Q ss_pred eEEeccccccchhhhccCCCeEEEEeccCCCC-chhHHHHhh----cc-cccc-cccCCCCCCCCCccchhhcccccccc
Q 039518 470 NAMDMNAYCGGFAVALNSLPVWVMNIVPISMK-NTLSAIYNR----GI-LGAF-HDWCEPFSTYPRTYDLLHANHLFSHY 542 (617)
Q Consensus 470 n~mDm~~~~g~faa~l~~~~v~vmnv~p~~~~-~~l~~~~~R----Gl-ig~~-~~~~~~f~typrtyDl~H~~~~~s~~ 542 (617)
+|||+|||.|.++.+|.+... +|+-.|.. ..+..+-++ |+ +-++ .|. +.++.-+.+||+|.+. +.++
T Consensus 32 ~vLdiGcG~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~-~~~~~~~~~fD~v~~~--~~~~ 105 (202)
T 2kw5_A 32 KILCLAEGEGRNACFLASLGY---EVTAVDQSSVGLAKAKQLAQEKGVKITTVQSNL-ADFDIVADAWEGIVSI--FCHL 105 (202)
T ss_dssp EEEECCCSCTHHHHHHHTTTC---EEEEECSSHHHHHHHHHHHHHHTCCEEEECCBT-TTBSCCTTTCSEEEEE--CCCC
T ss_pred CEEEECCCCCHhHHHHHhCCC---eEEEEECCHHHHHHHHHHHHhcCCceEEEEcCh-hhcCCCcCCccEEEEE--hhcC
Confidence 899999999999999988764 44444554 555555544 33 1111 122 1222113799999873 3321
Q ss_pred ccCCCCCChhhHHhhhhhcccCCceEEEecC-----------------hHHHHHHHhhhhcCCceEEEe
Q 039518 543 KNRGEVCSLEDIMLEMDLIIRPQGFIIIRDE-----------------KSLITRIRDLAPKFLWDVELH 594 (617)
Q Consensus 543 ~~~~~~c~~~~~l~e~dRilRP~G~~i~~d~-----------------~~~~~~~~~~~~~~~W~~~~~ 594 (617)
..-....+|-++-|+|+|||.+++.+. .-..++++++++ -|++...
T Consensus 106 ----~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~--Gf~v~~~ 168 (202)
T 2kw5_A 106 ----PSSLRQQLYPKVYQGLKPGGVFILEGFAPEQLQYNTGGPKDLDLLPKLETLQSELP--SLNWLIA 168 (202)
T ss_dssp ----CHHHHHHHHHHHHTTCCSSEEEEEEEECTTTGGGTSCCSSSGGGCCCHHHHHHHCS--SSCEEEE
T ss_pred ----CHHHHHHHHHHHHHhcCCCcEEEEEEeccccccCCCCCCCcceeecCHHHHHHHhc--CceEEEE
Confidence 122356889999999999999999731 123456777777 6766544
No 364
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=97.54 E-value=0.0001 Score=84.14 Aligned_cols=97 Identities=13% Similarity=0.081 Sum_probs=65.0
Q ss_pred CeEEEECCCCcHHHHHhccC----C--------CcEEEeeecCCcHHHHHHHHH---hC--CCcEEEEecCCCCCCC---
Q 039518 230 FQVLDVGCGVASFSAFLLPL----D--------IQTMSFAPKDGHENQIQFALE---RG--IGAMISALSTKQLPYP--- 289 (617)
Q Consensus 230 ~rVLDIGCGtG~~a~~La~~----g--------v~~v~v~~iDis~~~lq~A~e---rg--~~~~~~~~d~~~Lpf~--- 289 (617)
..|||||||+|.+....+.. + .....|.++|-++.++...+. ++ ..+.+..++++++.++
T Consensus 411 ~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp~A~~~l~~~~~Ng~~d~VtVI~gd~eev~lp~~~ 490 (745)
T 3ua3_A 411 VVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNPNAIVTLKYMNVRTWKRRVTIIESDMRSLPGIAKD 490 (745)
T ss_dssp EEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCHHHHHHHHHHHHHTTTTCSEEEESCGGGHHHHHHH
T ss_pred cEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCChHHHHHHHHHHhcCCCCeEEEEeCchhhccccccc
Confidence 45999999999885332111 1 134578888888765543332 23 3488899999888764
Q ss_pred --CCCeeEEEecccccccc--cchHHHHHHHHHhccCCeEEE
Q 039518 290 --SSSFEMVHCSRCRVDWH--ANDGILLKEVDRVLRPNGYFV 327 (617)
Q Consensus 290 --d~sFDlV~~s~~l~h~~--~d~~~~L~el~RvLrPGG~Li 327 (617)
.+..|+|+|-. +-.+. +-..+.|..+.|.|||||.++
T Consensus 491 ~~~ekVDIIVSEl-mGsfl~nEL~pe~Ld~v~r~Lkp~Gi~i 531 (745)
T 3ua3_A 491 RGFEQPDIIVSEL-LGSFGDNELSPECLDGVTGFLKPTTISI 531 (745)
T ss_dssp TTCCCCSEEEECC-CBTTBGGGSHHHHHHTTGGGSCTTCEEE
T ss_pred CCCCcccEEEEec-cccccchhccHHHHHHHHHhCCCCcEEE
Confidence 57899999743 32322 223468888899999999765
No 365
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=97.54 E-value=6e-05 Score=81.45 Aligned_cols=102 Identities=13% Similarity=-0.044 Sum_probs=68.8
Q ss_pred CCCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHh------CC-CcEEEEecCCCC-CC-CCCCeeEEEe
Q 039518 228 GVFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALER------GI-GAMISALSTKQL-PY-PSSSFEMVHC 298 (617)
Q Consensus 228 ~g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~er------g~-~~~~~~~d~~~L-pf-~d~sFDlV~~ 298 (617)
+|.+|||+|||+|..+..|++.+. .++++|+++.+++.|+++ |. ++.+..+|+.+. +. ++++||+|++
T Consensus 93 ~g~~VLDLgcG~G~~al~LA~~g~---~V~~VD~s~~~l~~Ar~N~~~~~~gl~~i~~i~~Da~~~L~~~~~~~fDvV~l 169 (410)
T 3ll7_A 93 EGTKVVDLTGGLGIDFIALMSKAS---QGIYIERNDETAVAARHNIPLLLNEGKDVNILTGDFKEYLPLIKTFHPDYIYV 169 (410)
T ss_dssp TTCEEEESSCSSSHHHHHHHTTCS---EEEEEESCHHHHHHHHHHHHHHSCTTCEEEEEESCGGGSHHHHHHHCCSEEEE
T ss_pred CCCEEEEeCCCchHHHHHHHhcCC---EEEEEECCHHHHHHHHHhHHHhccCCCcEEEEECcHHHhhhhccCCCceEEEE
Confidence 467899999999999999988764 678889999999998876 44 577888887663 32 2458999998
Q ss_pred ccccc-------ccccchHHHHHHHHHhcc-CCeEEEEEeCC
Q 039518 299 SRCRV-------DWHANDGILLKEVDRVLR-PNGYFVYSAPP 332 (617)
Q Consensus 299 s~~l~-------h~~~d~~~~L~el~RvLr-PGG~Liis~p~ 332 (617)
.-... ...++..--+.++.+.|. .+..+++-.+|
T Consensus 170 DPPrr~~~~grv~~led~~P~l~~~~~~l~~~~~~~~vK~sP 211 (410)
T 3ll7_A 170 DPARRSGADKRVYAIADCEPDLIPLATELLPFCSSILAKLSP 211 (410)
T ss_dssp CCEEC-----CCCCGGGEESCHHHHHHHHGGGSSEEEEEECT
T ss_pred CCCCcCCCCceEEehhhcCCCHHHHHHHHHhhCCcEEEEcCC
Confidence 52111 111122223556666443 44556665543
No 366
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=97.53 E-value=0.00037 Score=72.02 Aligned_cols=101 Identities=15% Similarity=0.156 Sum_probs=74.4
Q ss_pred CCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHh----------CCCcEEEEecCCCC-CCCCCCeeEEE
Q 039518 229 VFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALER----------GIGAMISALSTKQL-PYPSSSFEMVH 297 (617)
Q Consensus 229 g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~er----------g~~~~~~~~d~~~L-pf~d~sFDlV~ 297 (617)
.++||-||.|.|..+..+++... +..++.+|+++..++.+++. ..++.+..+|.... .-..++||+|+
T Consensus 84 pk~VLIiGgGdG~~~revlk~~~-v~~v~~VEID~~Vv~~a~~~lp~~~~~~~~dpRv~v~~~Dg~~~l~~~~~~yDvIi 162 (294)
T 3o4f_A 84 AKHVLIIGGGDGAMLREVTRHKN-VESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVII 162 (294)
T ss_dssp CCEEEEESCTTSHHHHHHHTCTT-CCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCTTTTTSCSSCCEEEEE
T ss_pred CCeEEEECCCchHHHHHHHHcCC-cceEEEEcCCHHHHHHHHhcCccccccccCCCcEEEEechHHHHHhhccccCCEEE
Confidence 45699999999999999988632 23677789999999999875 23477888886443 34567899999
Q ss_pred eccccccccc----chHHHHHHHHHhccCCeEEEEEeC
Q 039518 298 CSRCRVDWHA----NDGILLKEVDRVLRPNGYFVYSAP 331 (617)
Q Consensus 298 ~s~~l~h~~~----d~~~~L~el~RvLrPGG~Liis~p 331 (617)
.- +...... .-..+++.+.+.|+|||.++.-..
T Consensus 163 ~D-~~dp~~~~~~L~t~eFy~~~~~~L~p~Gv~v~q~~ 199 (294)
T 3o4f_A 163 SD-CTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQNG 199 (294)
T ss_dssp ES-CCCCCCTTCCSSCCHHHHHHHHTEEEEEEEEEEEE
T ss_pred Ee-CCCcCCCchhhcCHHHHHHHHHHhCCCCEEEEecC
Confidence 53 2222111 125689999999999999998654
No 367
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=97.52 E-value=0.00014 Score=72.32 Aligned_cols=129 Identities=16% Similarity=0.199 Sum_probs=76.1
Q ss_pred eeEEeccccccchhhhccCCCe-EEEEeccCCCC-chhHHHHhhcc-cc-----cccccC-CCCCCCCCccchhhccccc
Q 039518 469 RNAMDMNAYCGGFAVALNSLPV-WVMNIVPISMK-NTLSAIYNRGI-LG-----AFHDWC-EPFSTYPRTYDLLHANHLF 539 (617)
Q Consensus 469 Rn~mDm~~~~g~faa~l~~~~v-~vmnv~p~~~~-~~l~~~~~RGl-ig-----~~~~~~-~~f~typrtyDl~H~~~~~ 539 (617)
.+|||+|||.|+|+..|..... -|.-| |-. +.|..+..+.- ++ -+...+ +.++. .-||.+-++-+|
T Consensus 39 ~~VLDiGcGtG~~t~~la~~g~~~V~gv---Dis~~ml~~a~~~~~~~~~~~~~~~~~~~~~~~~~--~~~d~~~~D~v~ 113 (232)
T 3opn_A 39 KTCLDIGSSTGGFTDVMLQNGAKLVYAL---DVGTNQLAWKIRSDERVVVMEQFNFRNAVLADFEQ--GRPSFTSIDVSF 113 (232)
T ss_dssp CEEEEETCTTSHHHHHHHHTTCSEEEEE---CSSCCCCCHHHHTCTTEEEECSCCGGGCCGGGCCS--CCCSEEEECCSS
T ss_pred CEEEEEccCCCHHHHHHHhcCCCEEEEE---cCCHHHHHHHHHhCccccccccceEEEeCHhHcCc--CCCCEEEEEEEh
Confidence 5799999999999998877653 33333 333 55555554321 11 111111 22322 013444444444
Q ss_pred cccccCCCCCChhhHHhhhhhcccCCceEEEe-------------------cC---hHHHHHHHhhhhcCCceEEEeecc
Q 039518 540 SHYKNRGEVCSLEDIMLEMDLIIRPQGFIIIR-------------------DE---KSLITRIRDLAPKFLWDVELHSLE 597 (617)
Q Consensus 540 s~~~~~~~~c~~~~~l~e~dRilRP~G~~i~~-------------------d~---~~~~~~~~~~~~~~~W~~~~~~~e 597 (617)
+ .+..+|-|+-|+|+|||.+++- |. ...++++.+++...-|++...+..
T Consensus 114 ~---------~l~~~l~~i~rvLkpgG~lv~~~~p~~e~~~~~~~~~G~~~d~~~~~~~~~~l~~~l~~aGf~v~~~~~~ 184 (232)
T 3opn_A 114 I---------SLDLILPPLYEILEKNGEVAALIKPQFEAGREQVGKNGIIRDPKVHQMTIEKVLKTATQLGFSVKGLTFS 184 (232)
T ss_dssp S---------CGGGTHHHHHHHSCTTCEEEEEECHHHHSCHHHHC-CCCCCCHHHHHHHHHHHHHHHHHHTEEEEEEEEC
T ss_pred h---------hHHHHHHHHHHhccCCCEEEEEECcccccCHHHhCcCCeecCcchhHHHHHHHHHHHHHCCCEEEEEEEc
Confidence 4 2367999999999999999885 11 134567888888888887666433
Q ss_pred c--cCC-CceeEEEEEe
Q 039518 598 N--REK-KMESVLICRK 611 (617)
Q Consensus 598 ~--~~~-~~~~~l~~~k 611 (617)
. ++. ..|-++.++|
T Consensus 185 pi~g~~gn~e~l~~~~~ 201 (232)
T 3opn_A 185 PIKGGAGNVEFLVHLLK 201 (232)
T ss_dssp SSCBTTTBCCEEEEEEE
T ss_pred cCCCCCCCHHHHHHHhh
Confidence 2 233 3355666665
No 368
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=97.52 E-value=0.00012 Score=73.11 Aligned_cols=124 Identities=13% Similarity=0.134 Sum_probs=79.2
Q ss_pred eeEEeccccccchhhhccCCCeEEEEeccCCCC-chhHHHHhh----cc---ccc-ccccCCCCCCC-CCccchhhcccc
Q 039518 469 RNAMDMNAYCGGFAVALNSLPVWVMNIVPISMK-NTLSAIYNR----GI---LGA-FHDWCEPFSTY-PRTYDLLHANHL 538 (617)
Q Consensus 469 Rn~mDm~~~~g~faa~l~~~~v~vmnv~p~~~~-~~l~~~~~R----Gl---ig~-~~~~~~~f~ty-prtyDl~H~~~~ 538 (617)
.+|||+|||.|.++..|....-. +|+-.|-. ..+..+-++ |+ +-+ ..|..+....+ +.+||+|-++--
T Consensus 51 ~~vLDlG~G~G~~~~~la~~~~~--~v~gvDi~~~~~~~a~~n~~~~~~~~~v~~~~~D~~~~~~~~~~~~fD~Ii~npP 128 (259)
T 3lpm_A 51 GKIIDLCSGNGIIPLLLSTRTKA--KIVGVEIQERLADMAKRSVAYNQLEDQIEIIEYDLKKITDLIPKERADIVTCNPP 128 (259)
T ss_dssp CEEEETTCTTTHHHHHHHTTCCC--EEEEECCSHHHHHHHHHHHHHTTCTTTEEEECSCGGGGGGTSCTTCEEEEEECCC
T ss_pred CEEEEcCCchhHHHHHHHHhcCC--cEEEEECCHHHHHHHHHHHHHCCCcccEEEEECcHHHhhhhhccCCccEEEECCC
Confidence 58999999999999988766432 44444544 444443332 43 222 23333333323 389999998755
Q ss_pred ccccc--------------cCCCCCChhhHHhhhhhcccCCceEEEecChHHHHHHHhhhhcCCceEEEe
Q 039518 539 FSHYK--------------NRGEVCSLEDIMLEMDLIIRPQGFIIIRDEKSLITRIRDLAPKFLWDVELH 594 (617)
Q Consensus 539 ~s~~~--------------~~~~~c~~~~~l~e~dRilRP~G~~i~~d~~~~~~~~~~~~~~~~W~~~~~ 594 (617)
|.... .....+.++.++-++-|+|+|||.+++--..+.+.++...++...|+....
T Consensus 129 y~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~l~~~~~~~~~~ 198 (259)
T 3lpm_A 129 YFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANFVHRPERLLDIIDIMRKYRLEPKRI 198 (259)
T ss_dssp C-----------------------HHHHHHHHHHHHHEEEEEEEEEEECTTTHHHHHHHHHHTTEEEEEE
T ss_pred CCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEEEEcHHHHHHHHHHHHHCCCceEEE
Confidence 43110 001125567899999999999999999766677778888888888876543
No 369
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=97.51 E-value=9.4e-05 Score=78.69 Aligned_cols=115 Identities=12% Similarity=0.186 Sum_probs=68.6
Q ss_pred HHHHHHHhcc--CCCCCeeeEEeccccccchhhhccCCCe-EEEEeccCCCCchh-HHHHhhcc---cccccccCCCCCC
Q 039518 453 QVRHYWQLMN--VNETEIRNAMDMNAYCGGFAVALNSLPV-WVMNIVPISMKNTL-SAIYNRGI---LGAFHDWCEPFST 525 (617)
Q Consensus 453 ~v~~y~~~~~--~~~~~~Rn~mDm~~~~g~faa~l~~~~v-~vmnv~p~~~~~~l-~~~~~RGl---ig~~~~~~~~f~t 525 (617)
+...|.+.|- +....=.+|||+|||.|.++..|.+... -|.-|=+...-... ..+-+.|+ |-+++.=.+.++
T Consensus 47 r~~~~~~~i~~~~~~~~~~~VLDlGcGtG~ls~~la~~g~~~V~gvD~s~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~- 125 (376)
T 3r0q_C 47 RMDAYFNAVFQNKHHFEGKTVLDVGTGSGILAIWSAQAGARKVYAVEATKMADHARALVKANNLDHIVEVIEGSVEDIS- 125 (376)
T ss_dssp HHHHHHHHHHTTTTTTTTCEEEEESCTTTHHHHHHHHTTCSEEEEEESSTTHHHHHHHHHHTTCTTTEEEEESCGGGCC-
T ss_pred HHHHHHHHHHhccccCCCCEEEEeccCcCHHHHHHHhcCCCEEEEEccHHHHHHHHHHHHHcCCCCeEEEEECchhhcC-
Confidence 4445666552 2222236799999999999888876643 44444443111222 22334454 333332223333
Q ss_pred CCCccchhhccccccccccCCCCCChhhHHhhhhhcccCCceEEEe
Q 039518 526 YPRTYDLLHANHLFSHYKNRGEVCSLEDIMLEMDLIIRPQGFIIIR 571 (617)
Q Consensus 526 yprtyDl~H~~~~~s~~~~~~~~c~~~~~l~e~dRilRP~G~~i~~ 571 (617)
+|..||+|.+..+.... ...-.+..++-+++|+|+|||.+|+.
T Consensus 126 ~~~~~D~Iv~~~~~~~l---~~e~~~~~~l~~~~~~LkpgG~li~~ 168 (376)
T 3r0q_C 126 LPEKVDVIISEWMGYFL---LRESMFDSVISARDRWLKPTGVMYPS 168 (376)
T ss_dssp CSSCEEEEEECCCBTTB---TTTCTHHHHHHHHHHHEEEEEEEESS
T ss_pred cCCcceEEEEcChhhcc---cchHHHHHHHHHHHhhCCCCeEEEEe
Confidence 45899999986543321 22234667899999999999999875
No 370
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=97.50 E-value=3.6e-05 Score=75.67 Aligned_cols=99 Identities=9% Similarity=0.047 Sum_probs=61.1
Q ss_pred eeEEeccccccchhhhccCCCeEEEEeccCCCC-chhHHHHhhc----c-cc-cccccCC---CCCCCCCccchhhcc-c
Q 039518 469 RNAMDMNAYCGGFAVALNSLPVWVMNIVPISMK-NTLSAIYNRG----I-LG-AFHDWCE---PFSTYPRTYDLLHAN-H 537 (617)
Q Consensus 469 Rn~mDm~~~~g~faa~l~~~~v~vmnv~p~~~~-~~l~~~~~RG----l-ig-~~~~~~~---~f~typrtyDl~H~~-~ 537 (617)
..|||+|||.|.++..|.....- +|+-.|.. ..+..+-++. . +- +..|+.+ +|+ +.+||+|.++ .
T Consensus 62 ~~vLDiGcGtG~~~~~l~~~~~~--~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~--~~~fD~V~~d~~ 137 (236)
T 1zx0_A 62 GRVLEVGFGMAIAASKVQEAPID--EHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAPTLP--DGHFDGILYDTY 137 (236)
T ss_dssp EEEEEECCTTSHHHHHHHTSCEE--EEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHGGGSC--TTCEEEEEECCC
T ss_pred CeEEEEeccCCHHHHHHHhcCCC--eEEEEcCCHHHHHHHHHHHHhcCCCeEEEecCHHHhhcccC--CCceEEEEECCc
Confidence 57999999999999999775542 34445555 6666665543 1 11 1122222 343 3899999873 2
Q ss_pred cccccccCCCCCChhhHHhhhhhcccCCceEEEecC
Q 039518 538 LFSHYKNRGEVCSLEDIMLEMDLIIRPQGFIIIRDE 573 (617)
Q Consensus 538 ~~s~~~~~~~~c~~~~~l~e~dRilRP~G~~i~~d~ 573 (617)
.++ . ...+.=..+.+|-|+-|+|||||.+++-+-
T Consensus 138 ~~~-~-~~~~~~~~~~~l~~~~r~LkpgG~l~~~~~ 171 (236)
T 1zx0_A 138 PLS-E-ETWHTHQFNFIKNHAFRLLKPGGVLTYCNL 171 (236)
T ss_dssp CCB-G-GGTTTHHHHHHHHTHHHHEEEEEEEEECCH
T ss_pred ccc-h-hhhhhhhHHHHHHHHHHhcCCCeEEEEEec
Confidence 111 1 011111223679999999999999998653
No 371
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=97.50 E-value=0.00015 Score=68.84 Aligned_cols=135 Identities=12% Similarity=0.153 Sum_probs=70.7
Q ss_pred CCCCCeeeEEeccccccchhhhccCC------CeEEEEeccCCCCchhHHHHhhcccccccccCCCCC------------
Q 039518 463 VNETEIRNAMDMNAYCGGFAVALNSL------PVWVMNIVPISMKNTLSAIYNRGILGAFHDWCEPFS------------ 524 (617)
Q Consensus 463 ~~~~~~Rn~mDm~~~~g~faa~l~~~------~v~vmnv~p~~~~~~l~~~~~RGlig~~~~~~~~f~------------ 524 (617)
+..+ .+|||+|||.|+++.+|.+. .|..+-+.|.... .++.-+-.|..+. .
T Consensus 20 ~~~~--~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~~~--------~~v~~~~~d~~~~-~~~~~~~~~~i~~ 88 (201)
T 2plw_A 20 LKKN--KIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMDPI--------PNVYFIQGEIGKD-NMNNIKNINYIDN 88 (201)
T ss_dssp CCTT--EEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCCCC--------TTCEEEECCTTTT-SSCCC--------
T ss_pred CCCC--CEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccCCC--------CCceEEEccccch-hhhhhcccccccc
Confidence 3444 57999999999999888643 2455555442111 1211112232221 1
Q ss_pred ------------CCC-CccchhhccccccccccCCCC-CC-------hhhHHhhhhhcccCCceEEEecCh-HHHHHHHh
Q 039518 525 ------------TYP-RTYDLLHANHLFSHYKNRGEV-CS-------LEDIMLEMDLIIRPQGFIIIRDEK-SLITRIRD 582 (617)
Q Consensus 525 ------------typ-rtyDl~H~~~~~s~~~~~~~~-c~-------~~~~l~e~dRilRP~G~~i~~d~~-~~~~~~~~ 582 (617)
.+| .+||+|-++..+... ... -+ ...+|-++-|+|+|||.+++.... +....+..
T Consensus 89 ~~~~~~~~~~~~~~~~~~fD~v~~~~~~~~~---g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~l~~ 165 (201)
T 2plw_A 89 MNNNSVDYKLKEILQDKKIDIILSDAAVPCI---GNKIDDHLNSCELTLSITHFMEQYINIGGTYIVKMYLGSQTNNLKT 165 (201)
T ss_dssp ---CHHHHHHHHHHTTCCEEEEEECCCCCCC---SCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECSTTHHHHHH
T ss_pred ccchhhHHHHHhhcCCCcccEEEeCCCcCCC---CCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEeCCCCHHHHHH
Confidence 023 689999987654310 000 00 123788899999999999985211 12233344
Q ss_pred hhhcCCceEEEe-eccccCCCceeEEEEEe
Q 039518 583 LAPKFLWDVELH-SLENREKKMESVLICRK 611 (617)
Q Consensus 583 ~~~~~~W~~~~~-~~e~~~~~~~~~l~~~k 611 (617)
.++..-.++... +....+...|..+||++
T Consensus 166 ~l~~~f~~v~~~~~~~~r~~s~e~y~v~~~ 195 (201)
T 2plw_A 166 YLKGMFQLVHTTKPKASRNESREIYLVCKN 195 (201)
T ss_dssp HHHTTEEEEEECCCC-----CCEEEEEEEE
T ss_pred HHHHHHheEEEECCcccCCcCceEEEEEec
Confidence 333332233332 22223345688888876
No 372
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=97.49 E-value=3.6e-05 Score=81.86 Aligned_cols=93 Identities=14% Similarity=0.141 Sum_probs=63.7
Q ss_pred eeEEeccccccchhhhccCC---CeEEEEeccCCCC-chhHHHHhh---------c-c----cc-cccccCC-------C
Q 039518 469 RNAMDMNAYCGGFAVALNSL---PVWVMNIVPISMK-NTLSAIYNR---------G-I----LG-AFHDWCE-------P 522 (617)
Q Consensus 469 Rn~mDm~~~~g~faa~l~~~---~v~vmnv~p~~~~-~~l~~~~~R---------G-l----ig-~~~~~~~-------~ 522 (617)
.+|||+|||.|.++..|... .. .|+-.|-. ..+..+-++ | + +- +..|..+ +
T Consensus 85 ~~VLDlGcG~G~~~~~la~~~~~~~---~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~~~~ 161 (383)
T 4fsd_A 85 ATVLDLGCGTGRDVYLASKLVGEHG---KVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAEPEG 161 (383)
T ss_dssp CEEEEESCTTSHHHHHHHHHHTTTC---EEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCBSCC
T ss_pred CEEEEecCccCHHHHHHHHHhCCCC---EEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhcccCC
Confidence 57999999999988877543 22 22223333 566666655 4 1 11 2233333 3
Q ss_pred CCCCCCccchhhccccccccccCCCCCChhhHHhhhhhcccCCceEEEec
Q 039518 523 FSTYPRTYDLLHANHLFSHYKNRGEVCSLEDIMLEMDLIIRPQGFIIIRD 572 (617)
Q Consensus 523 f~typrtyDl~H~~~~~s~~~~~~~~c~~~~~l~e~dRilRP~G~~i~~d 572 (617)
|+ +.+||+|+++.++.+. . +...+|-|+-|+|||||++++.+
T Consensus 162 ~~--~~~fD~V~~~~~l~~~---~---d~~~~l~~~~r~LkpgG~l~i~~ 203 (383)
T 4fsd_A 162 VP--DSSVDIVISNCVCNLS---T---NKLALFKEIHRVLRDGGELYFSD 203 (383)
T ss_dssp CC--TTCEEEEEEESCGGGC---S---CHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CC--CCCEEEEEEccchhcC---C---CHHHHHHHHHHHcCCCCEEEEEE
Confidence 33 3799999999998865 2 25789999999999999999974
No 373
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=97.49 E-value=0.00025 Score=79.29 Aligned_cols=123 Identities=15% Similarity=0.164 Sum_probs=83.2
Q ss_pred HHHHHHHhhhhhccCCcccCCCCeEEEECCCCcHHHHHhccCC--CcEEEeeecCCcHHHHHHHHHh----CC---CcEE
Q 039518 208 EYIQRLGNMMTNETGNLRSAGVFQVLDVGCGVASFSAFLLPLD--IQTMSFAPKDGHENQIQFALER----GI---GAMI 278 (617)
Q Consensus 208 ~Y~~~L~~~L~~~~~~lr~~~g~rVLDIGCGtG~~a~~La~~g--v~~v~v~~iDis~~~lq~A~er----g~---~~~~ 278 (617)
...+.+.+++..... ..++.+|||.+||+|.|...+++.- .....+.+.|+++.+++.|+.+ |+ ++.+
T Consensus 204 ~Vv~lmv~ll~~~~~---~~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~~~~~~I 280 (542)
T 3lkd_A 204 PVAKLMTQIAFLGRE---DKQGFTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQELNTSTYNLARMNMILHGVPIENQFL 280 (542)
T ss_dssp HHHHHHHHHHHTTCT---TCTTCEEEETTCTTSTTGGGHHHHCSCTTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEE
T ss_pred HHHHHHHHHHhcccC---CCCCCEEeecccchhHHHHHHHHHHHhccCceEEEEECcHHHHHHHHHHHHHcCCCcCccce
Confidence 455556666542111 2356789999999999877765541 1123788999999999998764 55 3567
Q ss_pred EEecCCCC--C-CCCCCeeEEEeccccc-ccc------cc---------------hHHHHHHHHHhcc-CCeEEEEEeCC
Q 039518 279 SALSTKQL--P-YPSSSFEMVHCSRCRV-DWH------AN---------------DGILLKEVDRVLR-PNGYFVYSAPP 332 (617)
Q Consensus 279 ~~~d~~~L--p-f~d~sFDlV~~s~~l~-h~~------~d---------------~~~~L~el~RvLr-PGG~Liis~p~ 332 (617)
..+|+... | .....||+|+++--+. .|. .+ .-.++..+.+.|+ |||++.+..|.
T Consensus 281 ~~gDtL~~d~p~~~~~~fD~IvaNPPf~~~~~~~~~~~~d~rf~~~G~~~~~s~~~~~Fl~~~l~~Lk~~gGr~a~VlP~ 360 (542)
T 3lkd_A 281 HNADTLDEDWPTQEPTNFDGVLMNPPYSAKWSASSGFMDDPRFSPFGKLAPKSKADFAFLLHGYYHLKQDNGVMAIVLPH 360 (542)
T ss_dssp EESCTTTSCSCCSSCCCBSEEEECCCTTCCCCCCGGGGGSTTTGGGSSCCCTTCCHHHHHHHHHHTBCTTTCEEEEEEET
T ss_pred EecceecccccccccccccEEEecCCcCCccccchhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHhCCCceeEEEEecc
Confidence 78886554 3 3567899999872211 110 00 1247999999999 99999999874
Q ss_pred C
Q 039518 333 A 333 (617)
Q Consensus 333 ~ 333 (617)
.
T Consensus 361 g 361 (542)
T 3lkd_A 361 G 361 (542)
T ss_dssp H
T ss_pred h
Confidence 3
No 374
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=97.49 E-value=6.4e-05 Score=73.49 Aligned_cols=108 Identities=7% Similarity=0.102 Sum_probs=69.6
Q ss_pred eeEEeccccccchhhhccCCCeEEEEeccCCCC-chhHHHHhhc--ccccccccCCCCCCC-CCccchhhcccccccccc
Q 039518 469 RNAMDMNAYCGGFAVALNSLPVWVMNIVPISMK-NTLSAIYNRG--ILGAFHDWCEPFSTY-PRTYDLLHANHLFSHYKN 544 (617)
Q Consensus 469 Rn~mDm~~~~g~faa~l~~~~v~vmnv~p~~~~-~~l~~~~~RG--lig~~~~~~~~f~ty-prtyDl~H~~~~~s~~~~ 544 (617)
.+|||+|||.|.++..|..... .|+-.|-. ..+..+-++. +-=+..|+.+.++.- +.+||+|.+..
T Consensus 50 ~~vLDiGcG~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~~~fD~v~~~~------- 119 (226)
T 3m33_A 50 TRVLEAGCGHGPDAARFGPQAA---RWAAYDFSPELLKLARANAPHADVYEWNGKGELPAGLGAPFGLIVSRR------- 119 (226)
T ss_dssp CEEEEESCTTSHHHHHHGGGSS---EEEEEESCHHHHHHHHHHCTTSEEEECCSCSSCCTTCCCCEEEEEEES-------
T ss_pred CeEEEeCCCCCHHHHHHHHcCC---EEEEEECCHHHHHHHHHhCCCceEEEcchhhccCCcCCCCEEEEEeCC-------
Confidence 5799999999999999987754 34444544 6666666662 222344565555532 47999998541
Q ss_pred CCCCCChhhHHhhhhhcccCCceEEEecChHHHHHHHhhhhcCCceE
Q 039518 545 RGEVCSLEDIMLEMDLIIRPQGFIIIRDEKSLITRIRDLAPKFLWDV 591 (617)
Q Consensus 545 ~~~~c~~~~~l~e~dRilRP~G~~i~~d~~~~~~~~~~~~~~~~W~~ 591 (617)
....+|-|+-|+|||||.++.-........+.+.+....++.
T Consensus 120 -----~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~l~~~Gf~~ 161 (226)
T 3m33_A 120 -----GPTSVILRLPELAAPDAHFLYVGPRLNVPEVPERLAAVGWDI 161 (226)
T ss_dssp -----CCSGGGGGHHHHEEEEEEEEEEESSSCCTHHHHHHHHTTCEE
T ss_pred -----CHHHHHHHHHHHcCCCcEEEEeCCcCCHHHHHHHHHHCCCeE
Confidence 234789999999999999994322222234444444444443
No 375
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=97.49 E-value=6e-05 Score=73.45 Aligned_cols=95 Identities=18% Similarity=0.250 Sum_probs=61.3
Q ss_pred eeEEeccccccchhhhccCC--CeEEEEeccCCCC-chhHHHHhh-----cccccccccCCCCCCCCCccchhhcccccc
Q 039518 469 RNAMDMNAYCGGFAVALNSL--PVWVMNIVPISMK-NTLSAIYNR-----GILGAFHDWCEPFSTYPRTYDLLHANHLFS 540 (617)
Q Consensus 469 Rn~mDm~~~~g~faa~l~~~--~v~vmnv~p~~~~-~~l~~~~~R-----Glig~~~~~~~~f~typrtyDl~H~~~~~s 540 (617)
.+|||+|||.|.++.+|... ..-| +-.|-. ..+..+-++ .+--+..|..+ ++ ++.+||+|.+..++.
T Consensus 46 ~~vLDiG~G~G~~~~~l~~~~~~~~v---~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~-~~-~~~~fD~v~~~~~l~ 120 (234)
T 3dtn_A 46 PDILDLGAGTGLLSAFLMEKYPEATF---TLVDMSEKMLEIAKNRFRGNLKVKYIEADYSK-YD-FEEKYDMVVSALSIH 120 (234)
T ss_dssp CEEEEETCTTSHHHHHHHHHCTTCEE---EEEESCHHHHHHHHHHTCSCTTEEEEESCTTT-CC-CCSCEEEEEEESCGG
T ss_pred CeEEEecCCCCHHHHHHHHhCCCCeE---EEEECCHHHHHHHHHhhccCCCEEEEeCchhc-cC-CCCCceEEEEeCccc
Confidence 68999999999999988654 3322 222333 455555554 11112222222 22 238999999998887
Q ss_pred ccccCCCCCChhhHHhhhhhcccCCceEEEec
Q 039518 541 HYKNRGEVCSLEDIMLEMDLIIRPQGFIIIRD 572 (617)
Q Consensus 541 ~~~~~~~~c~~~~~l~e~dRilRP~G~~i~~d 572 (617)
+. ..-....+|-|+-|+|+|||.+++.+
T Consensus 121 ~~----~~~~~~~~l~~~~~~LkpgG~l~~~~ 148 (234)
T 3dtn_A 121 HL----EDEDKKELYKRSYSILKESGIFINAD 148 (234)
T ss_dssp GS----CHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cC----CHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 54 11112248999999999999999975
No 376
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=97.47 E-value=3.7e-05 Score=78.70 Aligned_cols=105 Identities=12% Similarity=0.048 Sum_probs=64.3
Q ss_pred ccCCCCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHH---hCCCcEEEEecCCCCCCCCCCeeEEEeccc
Q 039518 225 RSAGVFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALE---RGIGAMISALSTKQLPYPSSSFEMVHCSRC 301 (617)
Q Consensus 225 r~~~g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~e---rg~~~~~~~~d~~~Lpf~d~sFDlV~~s~~ 301 (617)
.+.++.+|||+|||+|.|+.+++++.. +.++.++|+...+...+.. .+.++.....+++-..++.+.+|+|+|-.+
T Consensus 87 ~Lk~~~~VLDLGaAPGGWsQvAa~~~g-v~sV~GvdvG~d~~~~pi~~~~~g~~ii~~~~~~dv~~l~~~~~DvVLSDmA 165 (282)
T 3gcz_A 87 YVKPTGIVVDLGCGRGGWSYYAASLKN-VKKVMAFTLGVQGHEKPIMRTTLGWNLIRFKDKTDVFNMEVIPGDTLLCDIG 165 (282)
T ss_dssp SCCCCEEEEEETCTTCHHHHHHHTSTT-EEEEEEECCCCTTSCCCCCCCBTTGGGEEEECSCCGGGSCCCCCSEEEECCC
T ss_pred CCCCCCEEEEeCCCCCHHHHHHHHhcC-CCeeeeEEeccCccccccccccCCCceEEeeCCcchhhcCCCCcCEEEecCc
Confidence 345777899999999999999886532 3356677776543111111 122233223222223456788999998643
Q ss_pred cc---ccccchH--HHHHHHHHhccCC--eEEEEEe
Q 039518 302 RV---DWHANDG--ILLKEVDRVLRPN--GYFVYSA 330 (617)
Q Consensus 302 l~---h~~~d~~--~~L~el~RvLrPG--G~Liis~ 330 (617)
.. ++.+... .+|.-+.++|+|| |.|++-.
T Consensus 166 pnsG~~~~D~~rs~~LL~~A~~~Lk~g~~G~Fv~Kv 201 (282)
T 3gcz_A 166 ESSPSIAVEEQRTLRVLNCAKQWLQEGNYTEFCIKV 201 (282)
T ss_dssp CCCSCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEE
T ss_pred cCCCChHHHHHHHHHHHHHHHHHcCCCCCCcEEEEE
Confidence 32 1111111 2567778999999 9999965
No 377
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=97.46 E-value=0.00018 Score=83.31 Aligned_cols=107 Identities=12% Similarity=0.027 Sum_probs=71.7
Q ss_pred CCCCeEEEECCCCcHHHHHhccCCC--cEEEeeecCCcHHHHHHH--HHh--------CCCc-EEEEecCCCC-CCCCCC
Q 039518 227 AGVFQVLDVGCGVASFSAFLLPLDI--QTMSFAPKDGHENQIQFA--LER--------GIGA-MISALSTKQL-PYPSSS 292 (617)
Q Consensus 227 ~~g~rVLDIGCGtG~~a~~La~~gv--~~v~v~~iDis~~~lq~A--~er--------g~~~-~~~~~d~~~L-pf~d~s 292 (617)
.++.+|||.|||+|.++..++++.. ....+.+.|+++.+++.| +.. +... .+...++... +...+.
T Consensus 320 ~~g~rVLDPaCGSG~FLIaaA~~l~ei~~~~IyGvEIDp~Al~LAK~RlNL~lN~LlhGi~~~~I~~dD~L~~~~~~~~k 399 (878)
T 3s1s_A 320 TEDEVISDPAAGSGNLLATVSAGFNNVMPRQIWANDIETLFLELLSIRLGLLFPQLVSSNNAPTITGEDVCSLNPEDFAN 399 (878)
T ss_dssp CTTCEEEETTCTTSHHHHHHHHTSTTCCGGGEEEECSCGGGHHHHHHHHHTTSTTTCBTTBCCEEECCCGGGCCGGGGTT
T ss_pred CCCCEEEECCCCccHHHHHHHHHhcccCCCeEEEEECCHHHHHHHHHHHHHHHhhhhcCCCcceEEecchhcccccccCC
Confidence 3567899999999999999887532 123678899999999888 322 2222 3443344332 234568
Q ss_pred eeEEEecccccc-ccc--------------------------c-hHHHHHHHHHhccCCeEEEEEeCCC
Q 039518 293 FEMVHCSRCRVD-WHA--------------------------N-DGILLKEVDRVLRPNGYFVYSAPPA 333 (617)
Q Consensus 293 FDlV~~s~~l~h-~~~--------------------------d-~~~~L~el~RvLrPGG~Liis~p~~ 333 (617)
||+|+++--... ... + ...++..+.+.|+|||++.+..|..
T Consensus 400 FDVVIgNPPYg~~~~~~~e~kd~~~r~~~g~p~~p~s~~G~~DLy~aFIe~Al~lLKpGGrLAfIlP~s 468 (878)
T 3s1s_A 400 VSVVVMNPPYVSGVTDPAIKRKFAHKIIQLTGNRPQTLFGQIGVEALFLELVTELVQDGTVISAIMPKQ 468 (878)
T ss_dssp EEEEEECCBCCSSCCCHHHHHHHHHHHHHHHSSCCSSCSSSCCHHHHHHHHHHHHSCTTCEEEEEEETH
T ss_pred CCEEEECCCccccccchhhhhhHHHHhhhhccccccccccccchHHHHHHHHHHhcCCCcEEEEEEChH
Confidence 999999843321 100 0 2236788999999999999998843
No 378
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=97.46 E-value=0.00011 Score=74.64 Aligned_cols=112 Identities=13% Similarity=0.179 Sum_probs=73.4
Q ss_pred eeEEeccccccchhhhccCCCeEEEEeccCCCC-chhHHHHhh----cccc---cc-cccCCCCCCCCCccchhhccccc
Q 039518 469 RNAMDMNAYCGGFAVALNSLPVWVMNIVPISMK-NTLSAIYNR----GILG---AF-HDWCEPFSTYPRTYDLLHANHLF 539 (617)
Q Consensus 469 Rn~mDm~~~~g~faa~l~~~~v~vmnv~p~~~~-~~l~~~~~R----Glig---~~-~~~~~~f~typrtyDl~H~~~~~ 539 (617)
.+|||+|||.|+|+.++....-- .|+-.|.. ..+..+-++ |+-. .+ .|.. .+.. +.+||+|.++..+
T Consensus 127 ~~VLDlgcG~G~~~~~la~~~~~--~V~~vD~s~~~~~~a~~n~~~n~~~~~v~~~~~D~~-~~~~-~~~fD~Vi~~~p~ 202 (278)
T 2frn_A 127 ELVVDMFAGIGHLSLPIAVYGKA--KVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNR-DFPG-ENIADRILMGYVV 202 (278)
T ss_dssp CEEEETTCTTTTTHHHHHHHTCC--EEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTT-TCCC-CSCEEEEEECCCS
T ss_pred CEEEEecccCCHHHHHHHHhCCC--EEEEEECCHHHHHHHHHHHHHcCCCceEEEEECCHH-Hhcc-cCCccEEEECCch
Confidence 57999999999999887643211 22333443 444444332 5432 22 2222 2222 5799999865443
Q ss_pred cccccCCCCCChhhHHhhhhhcccCCceEEEecC-------hHHHHHHHhhhhcCCceEEEe
Q 039518 540 SHYKNRGEVCSLEDIMLEMDLIIRPQGFIIIRDE-------KSLITRIRDLAPKFLWDVELH 594 (617)
Q Consensus 540 s~~~~~~~~c~~~~~l~e~dRilRP~G~~i~~d~-------~~~~~~~~~~~~~~~W~~~~~ 594 (617)
+ ...++-++-|+|+|||.+++.+. .+..+++++.++...|++...
T Consensus 203 ~----------~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~i~~~~~~~G~~~~~~ 254 (278)
T 2frn_A 203 R----------THEFIPKALSIAKDGAIIHYHNTVPEKLMPREPFETFKRITKEYGYDVEKL 254 (278)
T ss_dssp S----------GGGGHHHHHHHEEEEEEEEEEEEEEGGGTTTTTHHHHHHHHHHTTCEEEEE
T ss_pred h----------HHHHHHHHHHHCCCCeEEEEEEeeccccccccHHHHHHHHHHHcCCeeEEe
Confidence 3 24678889999999999999643 356788899999999988773
No 379
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=97.45 E-value=0.00037 Score=74.01 Aligned_cols=112 Identities=14% Similarity=0.053 Sum_probs=77.9
Q ss_pred ccCCCCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHh----C-------CCcEEEEecCCCCC-CCCCC
Q 039518 225 RSAGVFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALER----G-------IGAMISALSTKQLP-YPSSS 292 (617)
Q Consensus 225 r~~~g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~er----g-------~~~~~~~~d~~~Lp-f~d~s 292 (617)
..++|.+|||+.+|.|.=+..|++.+... .+.+.|+++..++..+++ + .++.+...|...++ ...+.
T Consensus 145 ~~~pg~~VLD~CAaPGGKT~~la~~~~~~-~l~A~D~~~~R~~~l~~~l~r~~~~~~~~~~~v~v~~~D~~~~~~~~~~~ 223 (359)
T 4fzv_A 145 GLQPGDIVLDLCAAPGGKTLALLQTGCCR-NLAANDLSPSRIARLQKILHSYVPEEIRDGNQVRVTSWDGRKWGELEGDT 223 (359)
T ss_dssp CCCTTEEEEESSCTTCHHHHHHHHTTCEE-EEEEECSCHHHHHHHHHHHHHHSCTTTTTSSSEEEECCCGGGHHHHSTTC
T ss_pred CCCCCCEEEEecCCccHHHHHHHHhcCCC-cEEEEcCCHHHHHHHHHHHHHhhhhhhccCCceEEEeCchhhcchhcccc
Confidence 34678889999999999999998876433 688899999887766543 2 24566666665553 34578
Q ss_pred eeEEEe----ccc---ccc--------ccc-c-------hHHHHHHHHHhccCCeEEEEEeCCCCCCC
Q 039518 293 FEMVHC----SRC---RVD--------WHA-N-------DGILLKEVDRVLRPNGYFVYSAPPAYRKD 337 (617)
Q Consensus 293 FDlV~~----s~~---l~h--------~~~-d-------~~~~L~el~RvLrPGG~Liis~p~~~~~~ 337 (617)
||.|++ +.. +.. +.. + ..++|..+.++|||||+|+.++-......
T Consensus 224 fD~VLlDaPCSg~g~g~~r~~~~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lkpGG~LVYsTCSl~~~E 291 (359)
T 4fzv_A 224 YDRVLVDVPCTTDRHSLHEEENNIFKRSRKKERQILPVLQVQLLAAGLLATKPGGHVVYSTCSLSHLQ 291 (359)
T ss_dssp EEEEEEECCCCCHHHHTTCCTTCTTSGGGHHHHHTHHHHHHHHHHHHHHTEEEEEEEEEEESCCCTTT
T ss_pred CCEEEECCccCCCCCcccccChhhhhhCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEEeCCCchhh
Confidence 999994 321 111 110 0 13578899999999999999987655443
No 380
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=97.45 E-value=8.2e-05 Score=77.08 Aligned_cols=145 Identities=11% Similarity=0.021 Sum_probs=82.4
Q ss_pred HHHHHHHHHHhccCCCCCeeeEEeccccccchhhhccCC--CeEEEEeccCCCC-chhHHHHhh----cccccccccCCC
Q 039518 450 WQDQVRHYWQLMNVNETEIRNAMDMNAYCGGFAVALNSL--PVWVMNIVPISMK-NTLSAIYNR----GILGAFHDWCEP 522 (617)
Q Consensus 450 w~~~v~~y~~~~~~~~~~~Rn~mDm~~~~g~faa~l~~~--~v~vmnv~p~~~~-~~l~~~~~R----Glig~~~~~~~~ 522 (617)
|..-+..=..++++..+ ..|||+|||.|+++|.++.+ ..-|.. .|-. ..+..+-++ |+ .-..-.+..
T Consensus 107 ~~~l~~~E~~la~l~~g--~rVLDIGcG~G~~ta~~lA~~~ga~V~g---IDis~~~l~~Ar~~~~~~gl-~~v~~v~gD 180 (298)
T 3fpf_A 107 YLELLKNEAALGRFRRG--ERAVFIGGGPLPLTGILLSHVYGMRVNV---VEIEPDIAELSRKVIEGLGV-DGVNVITGD 180 (298)
T ss_dssp HHHHHHHHHHHTTCCTT--CEEEEECCCSSCHHHHHHHHTTCCEEEE---EESSHHHHHHHHHHHHHHTC-CSEEEEESC
T ss_pred HHHHHHHHHHHcCCCCc--CEEEEECCCccHHHHHHHHHccCCEEEE---EECCHHHHHHHHHHHHhcCC-CCeEEEECc
Confidence 44444431234556666 68999999999988665321 222222 2333 455554443 65 222222222
Q ss_pred CCCCC-CccchhhccccccccccCCCCCChhhHHhhhhhcccCCceEEEecChHHHH---HH--HhhhhcCCceEEEeec
Q 039518 523 FSTYP-RTYDLLHANHLFSHYKNRGEVCSLEDIMLEMDLIIRPQGFIIIRDEKSLIT---RI--RDLAPKFLWDVELHSL 596 (617)
Q Consensus 523 f~typ-rtyDl~H~~~~~s~~~~~~~~c~~~~~l~e~dRilRP~G~~i~~d~~~~~~---~~--~~~~~~~~W~~~~~~~ 596 (617)
...+| .+||+|....+- -....++-|+-|+|||||.+++++....-. .. ....+ .|+.....+
T Consensus 181 a~~l~d~~FDvV~~~a~~---------~d~~~~l~el~r~LkPGG~Lvv~~~~~~r~~l~~~v~~~~~~--gf~~~~~~~ 249 (298)
T 3fpf_A 181 ETVIDGLEFDVLMVAALA---------EPKRRVFRNIHRYVDTETRIIYRTYTGMRAILYAPVSDDDIT--GFRRAGVVL 249 (298)
T ss_dssp GGGGGGCCCSEEEECTTC---------SCHHHHHHHHHHHCCTTCEEEEEECCGGGGGSSCCCCTGGGT--TEEEEEEEC
T ss_pred hhhCCCCCcCEEEECCCc---------cCHHHHHHHHHHHcCCCcEEEEEcCcchhhhccccCChhhhh--hhhheeEEC
Confidence 22344 899999754331 134579999999999999999997432100 00 11222 577666554
Q ss_pred cccCCCceeEEEEEec
Q 039518 597 ENREKKMESVLICRKK 612 (617)
Q Consensus 597 e~~~~~~~~~l~~~k~ 612 (617)
-.+ ...+.|.+++|.
T Consensus 250 p~~-~v~N~vv~a~k~ 264 (298)
T 3fpf_A 250 PSG-KVNNTSVLVFKC 264 (298)
T ss_dssp CCT-TCCCEEEEEEEC
T ss_pred CCC-CcCcEEEEEEcc
Confidence 333 334678888874
No 381
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=97.44 E-value=7.8e-05 Score=72.28 Aligned_cols=131 Identities=11% Similarity=0.057 Sum_probs=74.4
Q ss_pred eeEEeccccccchhhhccCC---CeEEEEeccCCCC-chhHHHHh----hcccc---c-ccccCCCCCCCC----Cccch
Q 039518 469 RNAMDMNAYCGGFAVALNSL---PVWVMNIVPISMK-NTLSAIYN----RGILG---A-FHDWCEPFSTYP----RTYDL 532 (617)
Q Consensus 469 Rn~mDm~~~~g~faa~l~~~---~v~vmnv~p~~~~-~~l~~~~~----RGlig---~-~~~~~~~f~typ----rtyDl 532 (617)
.+|||+|||.|.++.+|... ..- |+-.|-. ..+..+-+ .|+-. + ..|..+.++..+ .+||+
T Consensus 60 ~~vLdiG~G~G~~~~~la~~~~~~~~---v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~fD~ 136 (223)
T 3duw_A 60 RNILEIGTLGGYSTIWLARGLSSGGR---VVTLEASEKHADIARSNIERANLNDRVEVRTGLALDSLQQIENEKYEPFDF 136 (223)
T ss_dssp SEEEEECCTTSHHHHHHHTTCCSSCE---EEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCCCCSE
T ss_pred CEEEEecCCccHHHHHHHHhCCCCCE---EEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCcCE
Confidence 68999999999999988764 322 2223332 34443332 25422 1 122222222221 46999
Q ss_pred hhccccccccccCCCCCChhhHHhhhhhcccCCceEEEecCh------------HHHHHHHh----hhhcCCceEEEeec
Q 039518 533 LHANHLFSHYKNRGEVCSLEDIMLEMDLIIRPQGFIIIRDEK------------SLITRIRD----LAPKFLWDVELHSL 596 (617)
Q Consensus 533 ~H~~~~~s~~~~~~~~c~~~~~l~e~dRilRP~G~~i~~d~~------------~~~~~~~~----~~~~~~W~~~~~~~ 596 (617)
|.++..... ...++-++-|+|||||.+++.+-. .....+++ +...=+|++.+...
T Consensus 137 v~~d~~~~~---------~~~~l~~~~~~L~pgG~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~ 207 (223)
T 3duw_A 137 IFIDADKQN---------NPAYFEWALKLSRPGTVIIGDNVVREGEVIDNTSNDPRVQGIRRFYELIAAEPRVSATALQT 207 (223)
T ss_dssp EEECSCGGG---------HHHHHHHHHHTCCTTCEEEEESCSGGGGGGCTTCCCHHHHHHHHHHHHHHHCTTEEEEEEEE
T ss_pred EEEcCCcHH---------HHHHHHHHHHhcCCCcEEEEeCCCcCCcccCccccchHHHHHHHHHHHHhhCCCeEEEEEec
Confidence 986654442 247888999999999999986321 11222333 33445676666543
Q ss_pred cccCCCceeEEEEEec
Q 039518 597 ENREKKMESVLICRKK 612 (617)
Q Consensus 597 e~~~~~~~~~l~~~k~ 612 (617)
- +..+.+.+++++|+
T Consensus 208 ~-~~~~~dG~~~~~~~ 222 (223)
T 3duw_A 208 V-GSKGYDGFIMAVVK 222 (223)
T ss_dssp E-ETTEEEEEEEEEEC
T ss_pred c-CCCCCCeeEEEEEe
Confidence 1 22335788888764
No 382
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=97.44 E-value=0.00011 Score=74.20 Aligned_cols=136 Identities=15% Similarity=0.193 Sum_probs=82.4
Q ss_pred eeEEeccccccchhhhccC-CCeEEEEeccCCCC-chhHHHHhh----cc--c-ccccccCCCCCCCCCccchhhccccc
Q 039518 469 RNAMDMNAYCGGFAVALNS-LPVWVMNIVPISMK-NTLSAIYNR----GI--L-GAFHDWCEPFSTYPRTYDLLHANHLF 539 (617)
Q Consensus 469 Rn~mDm~~~~g~faa~l~~-~~v~vmnv~p~~~~-~~l~~~~~R----Gl--i-g~~~~~~~~f~typrtyDl~H~~~~~ 539 (617)
.+|||+|||.|.++.+|.. .|-. +|+-.|-. ..+.++-++ |+ + -+..|+.++++ +.+||+|-++--+
T Consensus 111 ~~vLDlG~GsG~~~~~la~~~~~~--~v~~vD~s~~~l~~a~~n~~~~~~~~v~~~~~d~~~~~~--~~~fD~Iv~npPy 186 (276)
T 2b3t_A 111 CRILDLGTGTGAIALALASERPDC--EIIAVDRMPDAVSLAQRNAQHLAIKNIHILQSDWFSALA--GQQFAMIVSNPPY 186 (276)
T ss_dssp CEEEEETCTTSHHHHHHHHHCTTS--EEEEECSSHHHHHHHHHHHHHHTCCSEEEECCSTTGGGT--TCCEEEEEECCCC
T ss_pred CEEEEecCCccHHHHHHHHhCCCC--EEEEEECCHHHHHHHHHHHHHcCCCceEEEEcchhhhcc--cCCccEEEECCCC
Confidence 4799999999999988863 2221 23333444 445544433 43 2 22345655544 4789999987433
Q ss_pred cccc----------cCCCC---------CChhhHHhhhhhcccCCceEEEecChHHHHHHHhhhhcCCceE-EEeecccc
Q 039518 540 SHYK----------NRGEV---------CSLEDIMLEMDLIIRPQGFIIIRDEKSLITRIRDLAPKFLWDV-ELHSLENR 599 (617)
Q Consensus 540 s~~~----------~~~~~---------c~~~~~l~e~dRilRP~G~~i~~d~~~~~~~~~~~~~~~~W~~-~~~~~e~~ 599 (617)
.... .+... -.+..++-++-|+|+|||++++.......++++++++...|+. .... .
T Consensus 187 ~~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~l~~~Gf~~v~~~~---d 263 (276)
T 2b3t_A 187 IDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGWQQGEAVRQAFILAGYHDVETCR---D 263 (276)
T ss_dssp BCTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEEEEEEEEEECCSSCHHHHHHHHHHTTCTTCCEEE---C
T ss_pred CCccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcCCCCEEEEEECchHHHHHHHHHHHCCCcEEEEEe---c
Confidence 2110 00111 1235678899999999999999866555667777776666653 2222 2
Q ss_pred CCCceeEEEEEe
Q 039518 600 EKKMESVLICRK 611 (617)
Q Consensus 600 ~~~~~~~l~~~k 611 (617)
-.+.+++++++|
T Consensus 264 ~~g~~r~~~~~~ 275 (276)
T 2b3t_A 264 YGDNERVTLGRY 275 (276)
T ss_dssp TTSSEEEEEEEC
T ss_pred CCCCCcEEEEEE
Confidence 345688888875
No 383
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=97.42 E-value=6.3e-05 Score=75.99 Aligned_cols=71 Identities=7% Similarity=-0.009 Sum_probs=52.1
Q ss_pred CCCCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHhCC---CcEEEEecCCCCCCCCC-----CeeEEEe
Q 039518 227 AGVFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALERGI---GAMISALSTKQLPYPSS-----SFEMVHC 298 (617)
Q Consensus 227 ~~g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~erg~---~~~~~~~d~~~Lpf~d~-----sFDlV~~ 298 (617)
.++.+|||||||+|.++. +.. +.. ..++++|+++.+++.++++.. ++.+..+|+..+++++. ..|.|++
T Consensus 20 ~~~~~VLEIG~G~G~lt~-l~~-~~~-~~v~avEid~~~~~~a~~~~~~~~~v~~i~~D~~~~~~~~~~~~~~~~~~vvs 96 (252)
T 1qyr_A 20 QKGQAMVEIGPGLAALTE-PVG-ERL-DQLTVIELDRDLAARLQTHPFLGPKLTIYQQDAMTFNFGELAEKMGQPLRVFG 96 (252)
T ss_dssp CTTCCEEEECCTTTTTHH-HHH-TTC-SCEEEECCCHHHHHHHHTCTTTGGGEEEECSCGGGCCHHHHHHHHTSCEEEEE
T ss_pred CCcCEEEEECCCCcHHHH-hhh-CCC-CeEEEEECCHHHHHHHHHHhccCCceEEEECchhhCCHHHhhcccCCceEEEE
Confidence 345679999999999999 654 432 127788999999999988642 57888889888876432 3467776
Q ss_pred cc
Q 039518 299 SR 300 (617)
Q Consensus 299 s~ 300 (617)
+.
T Consensus 97 Nl 98 (252)
T 1qyr_A 97 NL 98 (252)
T ss_dssp EC
T ss_pred CC
Confidence 53
No 384
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=97.41 E-value=5.7e-05 Score=72.07 Aligned_cols=96 Identities=13% Similarity=0.088 Sum_probs=59.3
Q ss_pred eeEEeccccccchhh-hccCCCeEEEEeccCCCC-chhHHHHhh----cc-ccc-ccccCCCCCCCCCccchhhcccccc
Q 039518 469 RNAMDMNAYCGGFAV-ALNSLPVWVMNIVPISMK-NTLSAIYNR----GI-LGA-FHDWCEPFSTYPRTYDLLHANHLFS 540 (617)
Q Consensus 469 Rn~mDm~~~~g~faa-~l~~~~v~vmnv~p~~~~-~~l~~~~~R----Gl-ig~-~~~~~~~f~typrtyDl~H~~~~~s 540 (617)
.+|||+|||.|.+++ .+..... +|+-.|.. ..+..+-++ |. +-+ ..|.. .++.-+.+||+|.+.+++.
T Consensus 25 ~~vLDiGcG~G~~~~~~~~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~-~~~~~~~~fD~v~~~~~l~ 100 (209)
T 2p8j_A 25 KTVLDCGAGGDLPPLSIFVEDGY---KTYGIEISDLQLKKAENFSRENNFKLNISKGDIR-KLPFKDESMSFVYSYGTIF 100 (209)
T ss_dssp SEEEEESCCSSSCTHHHHHHTTC---EEEEEECCHHHHHHHHHHHHHHTCCCCEEECCTT-SCCSCTTCEEEEEECSCGG
T ss_pred CEEEEECCCCCHHHHHHHHhCCC---EEEEEECCHHHHHHHHHHHHhcCCceEEEECchh-hCCCCCCceeEEEEcChHH
Confidence 589999999999844 4444443 23333443 444444333 31 111 22222 2332137999999887776
Q ss_pred ccccCCCCCChhhHHhhhhhcccCCceEEEec
Q 039518 541 HYKNRGEVCSLEDIMLEMDLIIRPQGFIIIRD 572 (617)
Q Consensus 541 ~~~~~~~~c~~~~~l~e~dRilRP~G~~i~~d 572 (617)
+. ..-....+|-|+-|+|+|||.+++.+
T Consensus 101 ~~----~~~~~~~~l~~~~~~LkpgG~l~~~~ 128 (209)
T 2p8j_A 101 HM----RKNDVKEAIDEIKRVLKPGGLACINF 128 (209)
T ss_dssp GS----CHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred hC----CHHHHHHHHHHHHHHcCCCcEEEEEE
Confidence 43 12235688999999999999999974
No 385
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=97.41 E-value=7.2e-05 Score=72.85 Aligned_cols=132 Identities=12% Similarity=0.169 Sum_probs=76.4
Q ss_pred eeeEEeccccccchhhhccCC---CeEEEEeccCCCC-chhHHHHh----hcccc----cccccCCCCCCCC-----Ccc
Q 039518 468 IRNAMDMNAYCGGFAVALNSL---PVWVMNIVPISMK-NTLSAIYN----RGILG----AFHDWCEPFSTYP-----RTY 530 (617)
Q Consensus 468 ~Rn~mDm~~~~g~faa~l~~~---~v~vmnv~p~~~~-~~l~~~~~----RGlig----~~~~~~~~f~typ-----rty 530 (617)
-++|||+|||.|.++..|... ..-|..| |.. ..+..+-+ .|+-. +..|..+.++..+ .+|
T Consensus 59 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~v---D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~l~~~~~~~~~~~f 135 (221)
T 3u81_A 59 PSLVLELGAYCGYSAVRMARLLQPGARLLTM---EINPDCAAITQQMLNFAGLQDKVTILNGASQDLIPQLKKKYDVDTL 135 (221)
T ss_dssp CSEEEEECCTTSHHHHHHHTTSCTTCEEEEE---ESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHGGGTTTTSCCCCC
T ss_pred CCEEEEECCCCCHHHHHHHHhCCCCCEEEEE---eCChHHHHHHHHHHHHcCCCCceEEEECCHHHHHHHHHHhcCCCce
Confidence 368999999999999888652 3322222 332 34444333 24421 2233333344444 689
Q ss_pred chhhccccccccccCCCCCChhhHHhhhhhcccCCceEEEecC-----hHHHHHHHhhhhcCCceEEEeec-cccCCCce
Q 039518 531 DLLHANHLFSHYKNRGEVCSLEDIMLEMDLIIRPQGFIIIRDE-----KSLITRIRDLAPKFLWDVELHSL-ENREKKME 604 (617)
Q Consensus 531 Dl~H~~~~~s~~~~~~~~c~~~~~l~e~dRilRP~G~~i~~d~-----~~~~~~~~~~~~~~~W~~~~~~~-e~~~~~~~ 604 (617)
|+|.+++....| . ....++-++ |+|||||.+++.|- .+.++.+++ .=.++...... .......+
T Consensus 136 D~V~~d~~~~~~---~---~~~~~~~~~-~~LkpgG~lv~~~~~~~~~~~~~~~l~~---~~~~~~~~~~~~~~~~~~~d 205 (221)
T 3u81_A 136 DMVFLDHWKDRY---L---PDTLLLEKC-GLLRKGTVLLADNVIVPGTPDFLAYVRG---SSSFECTHYSSYLEYMKVVD 205 (221)
T ss_dssp SEEEECSCGGGH---H---HHHHHHHHT-TCCCTTCEEEESCCCCCCCHHHHHHHHH---CTTEEEEEEEEEETTTTEEE
T ss_pred EEEEEcCCcccc---h---HHHHHHHhc-cccCCCeEEEEeCCCCcchHHHHHHHhh---CCCceEEEcccccccCCCCC
Confidence 999877665544 1 122456677 99999999999753 345554443 33566655431 12223456
Q ss_pred eEEEEEec
Q 039518 605 SVLICRKK 612 (617)
Q Consensus 605 ~~l~~~k~ 612 (617)
.+.+++++
T Consensus 206 G~~~~~~~ 213 (221)
T 3u81_A 206 GLEKAIYQ 213 (221)
T ss_dssp EEEEEEEC
T ss_pred ceEEEEEe
Confidence 78877763
No 386
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=97.39 E-value=0.00019 Score=70.59 Aligned_cols=126 Identities=12% Similarity=0.222 Sum_probs=75.7
Q ss_pred eeEEeccccccchhhhccC--CCeEEEEeccCCCC-chhHHHHh----hccc---c-cccccCCCCC-CCCCccchhhcc
Q 039518 469 RNAMDMNAYCGGFAVALNS--LPVWVMNIVPISMK-NTLSAIYN----RGIL---G-AFHDWCEPFS-TYPRTYDLLHAN 536 (617)
Q Consensus 469 Rn~mDm~~~~g~faa~l~~--~~v~vmnv~p~~~~-~~l~~~~~----RGli---g-~~~~~~~~f~-typrtyDl~H~~ 536 (617)
++|||+|||.|.++.+|.. ... .|+-.|-. ..+..+-+ .|+- - +..|..+..+ ..+.+||+|.++
T Consensus 73 ~~vLDiG~G~G~~~~~la~~~~~~---~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~V~~~ 149 (232)
T 3ntv_A 73 KNILEIGTAIGYSSMQFASISDDI---HVTTIERNETMIQYAKQNLATYHFENQVRIIEGNALEQFENVNDKVYDMIFID 149 (232)
T ss_dssp CEEEEECCSSSHHHHHHHTTCTTC---EEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCHHHHTTSCEEEEEEE
T ss_pred CEEEEEeCchhHHHHHHHHhCCCC---EEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhhccCCccEEEEc
Confidence 6899999999999998876 332 22333333 33433332 3431 1 2233334334 335899999855
Q ss_pred ccccccccCCCCCChhhHHhhhhhcccCCceEEEecC-----------------hHHHHHHHh----hhhcCCceEEEee
Q 039518 537 HLFSHYKNRGEVCSLEDIMLEMDLIIRPQGFIIIRDE-----------------KSLITRIRD----LAPKFLWDVELHS 595 (617)
Q Consensus 537 ~~~s~~~~~~~~c~~~~~l~e~dRilRP~G~~i~~d~-----------------~~~~~~~~~----~~~~~~W~~~~~~ 595 (617)
.-.. ....++-++-|+|||||.+|+.+- ......+++ +...-+++..+..
T Consensus 150 ~~~~---------~~~~~l~~~~~~LkpgG~lv~d~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lp 220 (232)
T 3ntv_A 150 AAKA---------QSKKFFEIYTPLLKHQGLVITDNVLYHGFVSDIGIVRSRNVRQMVKKVQDYNEWLIKQPGYTTNFLN 220 (232)
T ss_dssp TTSS---------SHHHHHHHHGGGEEEEEEEEEECTTGGGGGGCGGGGGCHHHHHHHHHHHHHHHHHHTCTTEEEEEEC
T ss_pred CcHH---------HHHHHHHHHHHhcCCCeEEEEeeCCcCccccCcccccchhhhHHHHHHHHHHHHHhcCCCeEEEEEE
Confidence 3322 345788899999999999999311 112233333 3445577766653
Q ss_pred ccccCCCceeEEEEEec
Q 039518 596 LENREKKMESVLICRKK 612 (617)
Q Consensus 596 ~e~~~~~~~~~l~~~k~ 612 (617)
. .+.+.|++|+
T Consensus 221 ~------~dG~~i~~k~ 231 (232)
T 3ntv_A 221 I------DDGLAISIKG 231 (232)
T ss_dssp S------TTCEEEEEEC
T ss_pred c------CCceEEEEEC
Confidence 2 3678888874
No 387
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=97.38 E-value=0.00014 Score=72.32 Aligned_cols=112 Identities=15% Similarity=0.143 Sum_probs=65.6
Q ss_pred eeEEeccccccchhhhccCC--------CeEEEEeccCCCCchhHHHHhhcccccccccCCC--CCCCCC-ccchhhccc
Q 039518 469 RNAMDMNAYCGGFAVALNSL--------PVWVMNIVPISMKNTLSAIYNRGILGAFHDWCEP--FSTYPR-TYDLLHANH 537 (617)
Q Consensus 469 Rn~mDm~~~~g~faa~l~~~--------~v~vmnv~p~~~~~~l~~~~~RGlig~~~~~~~~--f~typr-tyDl~H~~~ 537 (617)
.+|||+|||.|..++.|.+. .|+.+-+.|.-.. ... -+...+-=+..|..+. ++..+. +||+|+.+.
T Consensus 83 ~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~-~a~-~~~~~v~~~~gD~~~~~~l~~~~~~~fD~I~~d~ 160 (236)
T 2bm8_A 83 RTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQ-IPA-SDMENITLHQGDCSDLTTFEHLREMAHPLIFIDN 160 (236)
T ss_dssp SEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCC-CCG-GGCTTEEEEECCSSCSGGGGGGSSSCSSEEEEES
T ss_pred CEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHH-HHh-ccCCceEEEECcchhHHHHHhhccCCCCEEEECC
Confidence 58999999999999987542 3444444443222 111 0011121123344432 222222 699998654
Q ss_pred cccccccCCCCCChhhHHhhhhh-cccCCceEEEecCh-----HHHHHHHhhhhcC--CceE
Q 039518 538 LFSHYKNRGEVCSLEDIMLEMDL-IIRPQGFIIIRDEK-----SLITRIRDLAPKF--LWDV 591 (617)
Q Consensus 538 ~~s~~~~~~~~c~~~~~l~e~dR-ilRP~G~~i~~d~~-----~~~~~~~~~~~~~--~W~~ 591 (617)
. + -....+|-|+-| +|+|||++++.|.. .....+.++++.. .++.
T Consensus 161 ~--~-------~~~~~~l~~~~r~~LkpGG~lv~~d~~~~~~~~~~~~~~~~l~~~~~~f~~ 213 (236)
T 2bm8_A 161 A--H-------ANTFNIMKWAVDHLLEEGDYFIIEDMIPYWYRYAPQLFSEYLGAFRDVLSM 213 (236)
T ss_dssp S--C-------SSHHHHHHHHHHHTCCTTCEEEECSCHHHHHHHCHHHHHHHHHTTTTTEEE
T ss_pred c--h-------HhHHHHHHHHHHhhCCCCCEEEEEeCcccccccCHHHHHHHHHhCcccEEE
Confidence 3 1 146678999998 99999999997631 1123566666666 4654
No 388
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=97.37 E-value=5.6e-05 Score=79.74 Aligned_cols=97 Identities=12% Similarity=0.222 Sum_probs=63.7
Q ss_pred CeeeEEeccccccchhhhccC--CC--eEEEEeccCCCCchhHHHHhh----ccc----ccccccCCCCCCCCCccchhh
Q 039518 467 EIRNAMDMNAYCGGFAVALNS--LP--VWVMNIVPISMKNTLSAIYNR----GIL----GAFHDWCEPFSTYPRTYDLLH 534 (617)
Q Consensus 467 ~~Rn~mDm~~~~g~faa~l~~--~~--v~vmnv~p~~~~~~l~~~~~R----Gli----g~~~~~~~~f~typrtyDl~H 534 (617)
..+.|+|+|||.|.++.+|.+ .. |.++- -+..+..+-++ |+- =+-+|.-+.-..+|.+||+|.
T Consensus 179 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D-----~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~p~~~D~v~ 253 (363)
T 3dp7_A 179 HPKRLLDIGGNTGKWATQCVQYNKEVEVTIVD-----LPQQLEMMRKQTAGLSGSERIHGHGANLLDRDVPFPTGFDAVW 253 (363)
T ss_dssp CCSEEEEESCTTCHHHHHHHHHSTTCEEEEEE-----CHHHHHHHHHHHTTCTTGGGEEEEECCCCSSSCCCCCCCSEEE
T ss_pred CCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEe-----CHHHHHHHHHHHHhcCcccceEEEEccccccCCCCCCCcCEEE
Confidence 468999999999999999865 23 33333 23444444443 432 122333321002568999999
Q ss_pred ccccccccccCCCCCChhhHHhhhhhcccCCceEEEec
Q 039518 535 ANHLFSHYKNRGEVCSLEDIMLEMDLIIRPQGFIIIRD 572 (617)
Q Consensus 535 ~~~~~s~~~~~~~~c~~~~~l~e~dRilRP~G~~i~~d 572 (617)
+..++..| .+. ....+|-++=|+|+|||.++|.|
T Consensus 254 ~~~vlh~~---~~~-~~~~~l~~~~~~L~pgG~l~i~e 287 (363)
T 3dp7_A 254 MSQFLDCF---SEE-EVISILTRVAQSIGKDSKVYIME 287 (363)
T ss_dssp EESCSTTS---CHH-HHHHHHHHHHHHCCTTCEEEEEE
T ss_pred EechhhhC---CHH-HHHHHHHHHHHhcCCCcEEEEEe
Confidence 99888766 211 23468899999999999999964
No 389
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=97.37 E-value=0.00011 Score=77.37 Aligned_cols=99 Identities=13% Similarity=0.156 Sum_probs=62.6
Q ss_pred eeEEeccccccchhhhccCCCe-EEEEeccCCCCch-hHHHHhhcc---cccccccCCCCCCCC-Cccchhhcccccccc
Q 039518 469 RNAMDMNAYCGGFAVALNSLPV-WVMNIVPISMKNT-LSAIYNRGI---LGAFHDWCEPFSTYP-RTYDLLHANHLFSHY 542 (617)
Q Consensus 469 Rn~mDm~~~~g~faa~l~~~~v-~vmnv~p~~~~~~-l~~~~~RGl---ig~~~~~~~~f~typ-rtyDl~H~~~~~s~~ 542 (617)
.+|||+|||.|.++..|.+.+. -|.-|=+...-.. ...+-+.|+ |-+++.=-+.+ .+| .+||+|.+..+....
T Consensus 68 ~~VLDvGcG~G~~~~~la~~g~~~v~gvD~s~~l~~a~~~~~~~~~~~~v~~~~~d~~~~-~~~~~~fD~Iis~~~~~~l 146 (349)
T 3q7e_A 68 KVVLDVGSGTGILCMFAAKAGARKVIGIECSSISDYAVKIVKANKLDHVVTIIKGKVEEV-ELPVEKVDIIISEWMGYCL 146 (349)
T ss_dssp CEEEEESCTTSHHHHHHHHTTCSEEEEEECSTHHHHHHHHHHHTTCTTTEEEEESCTTTC-CCSSSCEEEEEECCCBBTB
T ss_pred CEEEEEeccchHHHHHHHHCCCCEEEEECcHHHHHHHHHHHHHcCCCCcEEEEECcHHHc-cCCCCceEEEEEccccccc
Confidence 5799999999999988877653 3443433311111 122334455 23333222333 245 899999987654433
Q ss_pred ccCCCCCChhhHHhhhhhcccCCceEEEe
Q 039518 543 KNRGEVCSLEDIMLEMDLIIRPQGFIIIR 571 (617)
Q Consensus 543 ~~~~~~c~~~~~l~e~dRilRP~G~~i~~ 571 (617)
...-.+..++-+++|+|+|||.+|..
T Consensus 147 ---~~~~~~~~~l~~~~r~LkpgG~li~~ 172 (349)
T 3q7e_A 147 ---FYESMLNTVLHARDKWLAPDGLIFPD 172 (349)
T ss_dssp ---TBTCCHHHHHHHHHHHEEEEEEEESC
T ss_pred ---cCchhHHHHHHHHHHhCCCCCEEccc
Confidence 33445678999999999999999753
No 390
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=97.37 E-value=9.4e-05 Score=74.19 Aligned_cols=113 Identities=14% Similarity=0.134 Sum_probs=74.0
Q ss_pred eeEEeccccccchhhhccCCCeEEEEeccCCCC-chhHHHHhh----cc-cccc-cccCCCCCCCCCccchhhccccccc
Q 039518 469 RNAMDMNAYCGGFAVALNSLPVWVMNIVPISMK-NTLSAIYNR----GI-LGAF-HDWCEPFSTYPRTYDLLHANHLFSH 541 (617)
Q Consensus 469 Rn~mDm~~~~g~faa~l~~~~v~vmnv~p~~~~-~~l~~~~~R----Gl-ig~~-~~~~~~f~typrtyDl~H~~~~~s~ 541 (617)
.+|||+|||.|.++.++..... +|+-.|-. ..+..+-++ |+ +-++ .|+.+.++ +..||+|.++.++..
T Consensus 122 ~~VLDiGcG~G~l~~~la~~g~---~v~gvDi~~~~v~~a~~n~~~~~~~v~~~~~d~~~~~~--~~~fD~Vv~n~~~~~ 196 (254)
T 2nxc_A 122 DKVLDLGTGSGVLAIAAEKLGG---KALGVDIDPMVLPQAEANAKRNGVRPRFLEGSLEAALP--FGPFDLLVANLYAEL 196 (254)
T ss_dssp CEEEEETCTTSHHHHHHHHTTC---EEEEEESCGGGHHHHHHHHHHTTCCCEEEESCHHHHGG--GCCEEEEEEECCHHH
T ss_pred CEEEEecCCCcHHHHHHHHhCC---eEEEEECCHHHHHHHHHHHHHcCCcEEEEECChhhcCc--CCCCCEEEECCcHHH
Confidence 5899999999999888765543 33333433 444444443 43 2222 13333232 368999998765542
Q ss_pred cccCCCCCChhhHHhhhhhcccCCceEEEecC-hHHHHHHHhhhhcCCceEEEee
Q 039518 542 YKNRGEVCSLEDIMLEMDLIIRPQGFIIIRDE-KSLITRIRDLAPKFLWDVELHS 595 (617)
Q Consensus 542 ~~~~~~~c~~~~~l~e~dRilRP~G~~i~~d~-~~~~~~~~~~~~~~~W~~~~~~ 595 (617)
+..++-++-|+|+|||++++++. ....+.+++.++..-++.....
T Consensus 197 ---------~~~~l~~~~~~LkpgG~lils~~~~~~~~~v~~~l~~~Gf~~~~~~ 242 (254)
T 2nxc_A 197 ---------HAALAPRYREALVPGGRALLTGILKDRAPLVREAMAGAGFRPLEEA 242 (254)
T ss_dssp ---------HHHHHHHHHHHEEEEEEEEEEEEEGGGHHHHHHHHHHTTCEEEEEE
T ss_pred ---------HHHHHHHHHHHcCCCCEEEEEeeccCCHHHHHHHHHHCCCEEEEEe
Confidence 35789999999999999999742 3446677777777778765543
No 391
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=97.35 E-value=8.7e-05 Score=75.38 Aligned_cols=90 Identities=13% Similarity=0.049 Sum_probs=58.6
Q ss_pred CeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHH-------h----C---CCcEEEEecCCC-CCCCCCCee
Q 039518 230 FQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALE-------R----G---IGAMISALSTKQ-LPYPSSSFE 294 (617)
Q Consensus 230 ~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~e-------r----g---~~~~~~~~d~~~-Lpf~d~sFD 294 (617)
.+|||+|||+|..+..+++++. .++++|+++.+.+.+++ + + .++.+..+|..+ ++....+||
T Consensus 90 ~~VLDl~~G~G~dal~lA~~g~---~V~~vE~~~~~~~l~~~~l~~a~~~~~~~~~l~~~i~~~~~D~~~~L~~~~~~fD 166 (258)
T 2oyr_A 90 PDVVDATAGLGRDAFVLASVGC---RVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLIHASSLTALTDITPRPQ 166 (258)
T ss_dssp CCEEETTCTTCHHHHHHHHHTC---CEEEEECCHHHHHHHHHHHHHHHHCTTTHHHHHHHEEEEESCHHHHSTTCSSCCS
T ss_pred CEEEEcCCcCCHHHHHHHHcCC---EEEEEECCHHHHHHHHHHHHHHHhhHhhhhhhhcCEEEEECCHHHHHHhCcccCC
Confidence 6899999999999999999875 46777999865333322 1 1 246778887654 342234699
Q ss_pred EEEecccccccccchHHHHHHHHHhccCCe
Q 039518 295 MVHCSRCRVDWHANDGILLKEVDRVLRPNG 324 (617)
Q Consensus 295 lV~~s~~l~h~~~d~~~~L~el~RvLrPGG 324 (617)
+|++.-.+.+ . ....++++..++|++.+
T Consensus 167 vV~lDP~y~~-~-~~saavkk~~~~lr~l~ 194 (258)
T 2oyr_A 167 VVYLDPMFPH-K-QKSALVKKEMRVFQSLV 194 (258)
T ss_dssp EEEECCCCCC-C-CC-----HHHHHHHHHS
T ss_pred EEEEcCCCCC-c-ccchHHHHHHHHHHHhh
Confidence 9998754432 2 23457777888888765
No 392
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=97.35 E-value=0.00016 Score=75.89 Aligned_cols=138 Identities=15% Similarity=0.162 Sum_probs=82.9
Q ss_pred CCCeeeEEeccccccchhhhccCC--CeEEEEeccCCCCchhHHHHh----hccc----ccccccCCCCCCCCCccchhh
Q 039518 465 ETEIRNAMDMNAYCGGFAVALNSL--PVWVMNIVPISMKNTLSAIYN----RGIL----GAFHDWCEPFSTYPRTYDLLH 534 (617)
Q Consensus 465 ~~~~Rn~mDm~~~~g~faa~l~~~--~v~vmnv~p~~~~~~l~~~~~----RGli----g~~~~~~~~f~typrtyDl~H 534 (617)
...-.+|+|+|||.|.++.+|.+. .+-+..+ |-+..+..+-+ .|+- =+-+|..++ .|..||+|.
T Consensus 180 ~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~---D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~---~~~~~D~v~ 253 (374)
T 1qzz_A 180 WSAVRHVLDVGGGNGGMLAAIALRAPHLRGTLV---ELAGPAERARRRFADAGLADRVTVAEGDFFKP---LPVTADVVL 253 (374)
T ss_dssp CTTCCEEEEETCTTSHHHHHHHHHCTTCEEEEE---ECHHHHHHHHHHHHHTTCTTTEEEEECCTTSC---CSCCEEEEE
T ss_pred CCCCCEEEEECCCcCHHHHHHHHHCCCCEEEEE---eCHHHHHHHHHHHHhcCCCCceEEEeCCCCCc---CCCCCCEEE
Confidence 345579999999999999988643 2322222 22233433332 3432 223444443 455699999
Q ss_pred ccccccccccCCCCCChhhHHhhhhhcccCCceEEEecC--h--H-----------------------HHHHHHhhhhcC
Q 039518 535 ANHLFSHYKNRGEVCSLEDIMLEMDLIIRPQGFIIIRDE--K--S-----------------------LITRIRDLAPKF 587 (617)
Q Consensus 535 ~~~~~s~~~~~~~~c~~~~~l~e~dRilRP~G~~i~~d~--~--~-----------------------~~~~~~~~~~~~ 587 (617)
+.+++.+| .+. ....+|-++-|+|+|||+++|.|. . + ..++++++++.-
T Consensus 254 ~~~vl~~~---~~~-~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~a 329 (374)
T 1qzz_A 254 LSFVLLNW---SDE-DALTILRGCVRALEPGGRLLVLDRADVEGDGADRFFSTLLDLRMLTFMGGRVRTRDEVVDLAGSA 329 (374)
T ss_dssp EESCGGGS---CHH-HHHHHHHHHHHHEEEEEEEEEEECCH-------HHHHHHHHHHHHHHHSCCCCCHHHHHHHHHTT
T ss_pred EeccccCC---CHH-HHHHHHHHHHHhcCCCcEEEEEechhhcCCCCCcchhhhcchHHHHhCCCcCCCHHHHHHHHHHC
Confidence 99888765 110 123789999999999999998765 2 1 234566677777
Q ss_pred CceEEEeeccccCC--CceeEEEEEec
Q 039518 588 LWDVELHSLENREK--KMESVLICRKK 612 (617)
Q Consensus 588 ~W~~~~~~~e~~~~--~~~~~l~~~k~ 612 (617)
-++......-.+.. ....++.++|+
T Consensus 330 Gf~~~~~~~~~~~~~~~~~~~i~~~~~ 356 (374)
T 1qzz_A 330 GLALASERTSGSTTLPFDFSILEFTAV 356 (374)
T ss_dssp TEEEEEEEEECCSSCSSCEEEEEEEEC
T ss_pred CCceEEEEECCCCcccCCcEEEEEEEC
Confidence 77754433221111 01267888775
No 393
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=97.34 E-value=4.7e-05 Score=74.88 Aligned_cols=97 Identities=13% Similarity=0.094 Sum_probs=61.2
Q ss_pred eeEEeccccccchhhhccCCCeEEEEeccCCCC-chhHHHHhhc----ccccccccCCC-CC-CCC--Cccchhhccccc
Q 039518 469 RNAMDMNAYCGGFAVALNSLPVWVMNIVPISMK-NTLSAIYNRG----ILGAFHDWCEP-FS-TYP--RTYDLLHANHLF 539 (617)
Q Consensus 469 Rn~mDm~~~~g~faa~l~~~~v~vmnv~p~~~~-~~l~~~~~RG----lig~~~~~~~~-f~-typ--rtyDl~H~~~~~ 539 (617)
.+|||+|||.|.++..|....- +|+-.|-. ..+..+-++- +--+..|..+. +. .++ ..||+|.+..++
T Consensus 58 ~~vLD~GcG~G~~~~~la~~~~---~v~gvD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~v~~~~~~ 134 (245)
T 3ggd_A 58 LPLIDFACGNGTQTKFLSQFFP---RVIGLDVSKSALEIAAKENTAANISYRLLDGLVPEQAAQIHSEIGDANIYMRTGF 134 (245)
T ss_dssp SCEEEETCTTSHHHHHHHHHSS---CEEEEESCHHHHHHHHHHSCCTTEEEEECCTTCHHHHHHHHHHHCSCEEEEESSS
T ss_pred CeEEEEcCCCCHHHHHHHHhCC---CEEEEECCHHHHHHHHHhCcccCceEEECcccccccccccccccCccEEEEcchh
Confidence 5699999999999998865432 33344444 5555555543 11111222221 00 011 238999988888
Q ss_pred cccccCCCCCChhhHHhhhhhcccCCceEEEec
Q 039518 540 SHYKNRGEVCSLEDIMLEMDLIIRPQGFIIIRD 572 (617)
Q Consensus 540 s~~~~~~~~c~~~~~l~e~dRilRP~G~~i~~d 572 (617)
.+. ..-....+|-|+-|+|+|||++++.+
T Consensus 135 ~~~----~~~~~~~~l~~~~~~LkpgG~l~i~~ 163 (245)
T 3ggd_A 135 HHI----PVEKRELLGQSLRILLGKQGAMYLIE 163 (245)
T ss_dssp TTS----CGGGHHHHHHHHHHHHTTTCEEEEEE
T ss_pred hcC----CHHHHHHHHHHHHHHcCCCCEEEEEe
Confidence 754 22345689999999999999988864
No 394
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=97.33 E-value=5.1e-05 Score=76.35 Aligned_cols=100 Identities=13% Similarity=0.140 Sum_probs=62.0
Q ss_pred eeEEeccccccchhhhccCCCeEEEEeccCCCC-chhHHHHhh----cc---cccc-cccCCCCCC-CCCccchhhcccc
Q 039518 469 RNAMDMNAYCGGFAVALNSLPVWVMNIVPISMK-NTLSAIYNR----GI---LGAF-HDWCEPFST-YPRTYDLLHANHL 538 (617)
Q Consensus 469 Rn~mDm~~~~g~faa~l~~~~v~vmnv~p~~~~-~~l~~~~~R----Gl---ig~~-~~~~~~f~t-yprtyDl~H~~~~ 538 (617)
.+|||+|||.|.++..|...+.. +|+-.|-. ..+..+-++ |+ +-+. .|..+ ++. -+.+||+|.+..+
T Consensus 66 ~~vLDiGcG~G~~~~~l~~~~~~--~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~~~~~~fD~v~~~~~ 142 (298)
T 1ri5_A 66 DSVLDLGCGKGGDLLKYERAGIG--EYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYG-RHMDLGKEFDVISSQFS 142 (298)
T ss_dssp CEEEEETCTTTTTHHHHHHHTCS--EEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTT-SCCCCSSCEEEEEEESC
T ss_pred CeEEEECCCCCHHHHHHHHCCCC--EEEEEECCHHHHHHHHHHHHhcCCCccEEEEECCccc-cccCCCCCcCEEEECch
Confidence 58999999999999888765431 22333333 444444443 32 2222 22222 222 2479999998877
Q ss_pred ccccccCCCCCChhhHHhhhhhcccCCceEEEecC
Q 039518 539 FSHYKNRGEVCSLEDIMLEMDLIIRPQGFIIIRDE 573 (617)
Q Consensus 539 ~s~~~~~~~~c~~~~~l~e~dRilRP~G~~i~~d~ 573 (617)
+.+. ..+.-....+|-|+-|+|+|||.+++...
T Consensus 143 l~~~--~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 175 (298)
T 1ri5_A 143 FHYA--FSTSESLDIAQRNIARHLRPGGYFIMTVP 175 (298)
T ss_dssp GGGG--GSSHHHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred hhhh--cCCHHHHHHHHHHHHHhcCCCCEEEEEEC
Confidence 6420 01122345789999999999999999743
No 395
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=97.33 E-value=4.3e-05 Score=77.41 Aligned_cols=101 Identities=8% Similarity=0.106 Sum_probs=62.1
Q ss_pred CCCCCeeeEEeccccccchhhhccC----CCeEEEEeccCCCC-chhHHHHhh----cccccccccCCCCCCCC-Cccch
Q 039518 463 VNETEIRNAMDMNAYCGGFAVALNS----LPVWVMNIVPISMK-NTLSAIYNR----GILGAFHDWCEPFSTYP-RTYDL 532 (617)
Q Consensus 463 ~~~~~~Rn~mDm~~~~g~faa~l~~----~~v~vmnv~p~~~~-~~l~~~~~R----Glig~~~~~~~~f~typ-rtyDl 532 (617)
+.++ -+|||+|||.|.++.+|.. .++=|.- .|-. .-|..+-+| |+..-+.-.|.-+..+| ..||+
T Consensus 68 ~~~~--~~vLDlGcGtG~~~~~la~~~~~~~~~v~g---vD~s~~ml~~A~~~~~~~~~~~~v~~~~~D~~~~~~~~~d~ 142 (261)
T 4gek_A 68 VQPG--TQVYDLGCSLGAATLSVRRNIHHDNCKIIA---IDNSPAMIERCRRHIDAYKAPTPVDVIEGDIRDIAIENASM 142 (261)
T ss_dssp CCTT--CEEEEETCTTTHHHHHHHHTCCSSSCEEEE---EESCHHHHHHHHHHHHTSCCSSCEEEEESCTTTCCCCSEEE
T ss_pred CCCC--CEEEEEeCCCCHHHHHHHHhcCCCCCEEEE---EECCHHHHHHHHHHHHhhccCceEEEeeccccccccccccc
Confidence 4555 3799999999999877753 2332332 3333 455554443 44322222233333344 56999
Q ss_pred hhccccccccccCCCCCChhhHHhhhhhcccCCceEEEec
Q 039518 533 LHANHLFSHYKNRGEVCSLEDIMLEMDLIIRPQGFIIIRD 572 (617)
Q Consensus 533 ~H~~~~~s~~~~~~~~c~~~~~l~e~dRilRP~G~~i~~d 572 (617)
|-+..++... ..-....+|-||-|+|||||.+|+.|
T Consensus 143 v~~~~~l~~~----~~~~~~~~l~~i~~~LkpGG~lii~e 178 (261)
T 4gek_A 143 VVLNFTLQFL----EPSERQALLDKIYQGLNPGGALVLSE 178 (261)
T ss_dssp EEEESCGGGS----CHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ceeeeeeeec----CchhHhHHHHHHHHHcCCCcEEEEEe
Confidence 9877766532 11122468999999999999999975
No 396
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=97.31 E-value=0.00032 Score=69.85 Aligned_cols=131 Identities=8% Similarity=0.044 Sum_probs=76.6
Q ss_pred eeEEeccccccchhhhccCC---CeEEEEeccCCCC-chhHHHHhh----cccc----cccccCCCCCCCC--Cccchhh
Q 039518 469 RNAMDMNAYCGGFAVALNSL---PVWVMNIVPISMK-NTLSAIYNR----GILG----AFHDWCEPFSTYP--RTYDLLH 534 (617)
Q Consensus 469 Rn~mDm~~~~g~faa~l~~~---~v~vmnv~p~~~~-~~l~~~~~R----Glig----~~~~~~~~f~typ--rtyDl~H 534 (617)
++|||+|||.|.++.+|... ..-|. -.|-. ..+..+-++ |+-. +..|..+.++..+ .+||+|.
T Consensus 65 ~~VLdiG~G~G~~~~~la~~~~~~~~v~---~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~l~~~~~~~~fD~V~ 141 (248)
T 3tfw_A 65 KRILEIGTLGGYSTIWMARELPADGQLL---TLEADAHHAQVARENLQLAGVDQRVTLREGPALQSLESLGECPAFDLIF 141 (248)
T ss_dssp SEEEEECCTTSHHHHHHHTTSCTTCEEE---EEECCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHTCCSCCCCSEEE
T ss_pred CEEEEecCCchHHHHHHHHhCCCCCEEE---EEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHhcCCCCCeEEEE
Confidence 78999999999999888764 22222 22332 444444433 5421 2233333333333 3899998
Q ss_pred ccccccccccCCCCCChhhHHhhhhhcccCCceEEEecCh------------HHHHHHHh----hhhcCCceEEEeeccc
Q 039518 535 ANHLFSHYKNRGEVCSLEDIMLEMDLIIRPQGFIIIRDEK------------SLITRIRD----LAPKFLWDVELHSLEN 598 (617)
Q Consensus 535 ~~~~~s~~~~~~~~c~~~~~l~e~dRilRP~G~~i~~d~~------------~~~~~~~~----~~~~~~W~~~~~~~e~ 598 (617)
++.-.. ....++-++=|+|||||++|+.+-. .....+++ +...-+|+...... -
T Consensus 142 ~d~~~~---------~~~~~l~~~~~~LkpGG~lv~~~~~~~g~v~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~-~ 211 (248)
T 3tfw_A 142 IDADKP---------NNPHYLRWALRYSRPGTLIIGDNVVRDGEVVNPQSADERVQGVRQFIEMMGAEPRLTATALQT-V 211 (248)
T ss_dssp ECSCGG---------GHHHHHHHHHHTCCTTCEEEEECCSGGGGGGCTTCCCHHHHHHHHHHHHHHHCTTEEEEEEEE-C
T ss_pred ECCchH---------HHHHHHHHHHHhcCCCeEEEEeCCCcCCcccCccccchHHHHHHHHHHHHhhCCCEEEEEeec-C
Confidence 654332 2346788889999999999986321 12223333 34455677665421 1
Q ss_pred cCCCceeEEEEEec
Q 039518 599 REKKMESVLICRKK 612 (617)
Q Consensus 599 ~~~~~~~~l~~~k~ 612 (617)
|....+.++|++|+
T Consensus 212 g~~~~DG~~i~~~~ 225 (248)
T 3tfw_A 212 GTKGWDGFTLAWVN 225 (248)
T ss_dssp STTCSEEEEEEEEC
T ss_pred CCCCCCeeEEEEEe
Confidence 22334788888875
No 397
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=97.31 E-value=0.00025 Score=70.74 Aligned_cols=102 Identities=13% Similarity=0.130 Sum_probs=60.5
Q ss_pred CCCCCeeeEEeccccccchhhhccCC--C-eEEEEeccCCC----CchhHHHHhh----cc---cccc-cc-cC-CCCCC
Q 039518 463 VNETEIRNAMDMNAYCGGFAVALNSL--P-VWVMNIVPISM----KNTLSAIYNR----GI---LGAF-HD-WC-EPFST 525 (617)
Q Consensus 463 ~~~~~~Rn~mDm~~~~g~faa~l~~~--~-v~vmnv~p~~~----~~~l~~~~~R----Gl---ig~~-~~-~~-~~f~t 525 (617)
+..+ .+|||+|||.|.++..|.+. | .-|.-+-+... +..+..+-++ |+ +-+. .| .. +..+.
T Consensus 41 ~~~~--~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~ 118 (275)
T 3bkx_A 41 VKPG--EKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGPLGDRLTVHFNTNLSDDLGPI 118 (275)
T ss_dssp CCTT--CEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTSTTGGGEEEECSCCTTTCCGGG
T ss_pred CCCC--CEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhcCCCCceEEEECChhhhccCCC
Confidence 4544 58999999999999888653 2 44444444432 2345444333 33 2111 22 21 11111
Q ss_pred CCCccchhhccccccccccCCCCCChhhHHhhhhhcccCCceEEEec
Q 039518 526 YPRTYDLLHANHLFSHYKNRGEVCSLEDIMLEMDLIIRPQGFIIIRD 572 (617)
Q Consensus 526 yprtyDl~H~~~~~s~~~~~~~~c~~~~~l~e~dRilRP~G~~i~~d 572 (617)
-+.+||+|++.+++.+. .+ ...++-.+.++++|||++++.+
T Consensus 119 ~~~~fD~v~~~~~l~~~---~~---~~~~~~~~~~l~~~gG~l~~~~ 159 (275)
T 3bkx_A 119 ADQHFDRVVLAHSLWYF---AS---ANALALLFKNMAAVCDHVDVAE 159 (275)
T ss_dssp TTCCCSEEEEESCGGGS---SC---HHHHHHHHHHHTTTCSEEEEEE
T ss_pred CCCCEEEEEEccchhhC---CC---HHHHHHHHHHHhCCCCEEEEEE
Confidence 13899999999988765 22 2344555566666799999963
No 398
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=97.30 E-value=8.1e-05 Score=72.47 Aligned_cols=101 Identities=8% Similarity=0.117 Sum_probs=64.4
Q ss_pred HHHHHhccCCCCCeeeEEeccccccchhhhccCCCeEEEEeccCCCC-chhHHHHhh-----cccccccccCCCCCCCCC
Q 039518 455 RHYWQLMNVNETEIRNAMDMNAYCGGFAVALNSLPVWVMNIVPISMK-NTLSAIYNR-----GILGAFHDWCEPFSTYPR 528 (617)
Q Consensus 455 ~~y~~~~~~~~~~~Rn~mDm~~~~g~faa~l~~~~v~vmnv~p~~~~-~~l~~~~~R-----Glig~~~~~~~~f~typr 528 (617)
....+.+.+..+ .+|||+|||.|.++..|..... +|+-.|-. ..+..+-++ .+--+..|..+.++ -+.
T Consensus 60 ~~~~~~~~~~~~--~~vLdiG~G~G~~~~~l~~~~~---~v~~vD~~~~~~~~a~~~~~~~~~v~~~~~d~~~~~~-~~~ 133 (231)
T 1vbf_A 60 IFMLDELDLHKG--QKVLEIGTGIGYYTALIAEIVD---KVVSVEINEKMYNYASKLLSYYNNIKLILGDGTLGYE-EEK 133 (231)
T ss_dssp HHHHHHTTCCTT--CEEEEECCTTSHHHHHHHHHSS---EEEEEESCHHHHHHHHHHHTTCSSEEEEESCGGGCCG-GGC
T ss_pred HHHHHhcCCCCC--CEEEEEcCCCCHHHHHHHHHcC---EEEEEeCCHHHHHHHHHHHhhcCCeEEEECCcccccc-cCC
Confidence 334444445554 4899999999999999876542 33333433 555555554 22222334444232 137
Q ss_pred ccchhhccccccccccCCCCCChhhHHhhhhhcccCCceEEEecC
Q 039518 529 TYDLLHANHLFSHYKNRGEVCSLEDIMLEMDLIIRPQGFIIIRDE 573 (617)
Q Consensus 529 tyDl~H~~~~~s~~~~~~~~c~~~~~l~e~dRilRP~G~~i~~d~ 573 (617)
+||+|.++..+.+. .-|+-|+|+|||.+++...
T Consensus 134 ~fD~v~~~~~~~~~------------~~~~~~~L~pgG~l~~~~~ 166 (231)
T 1vbf_A 134 PYDRVVVWATAPTL------------LCKPYEQLKEGGIMILPIG 166 (231)
T ss_dssp CEEEEEESSBBSSC------------CHHHHHTEEEEEEEEEEEC
T ss_pred CccEEEECCcHHHH------------HHHHHHHcCCCcEEEEEEc
Confidence 89999988887643 2478899999999999854
No 399
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=97.30 E-value=6.7e-05 Score=76.31 Aligned_cols=108 Identities=8% Similarity=0.003 Sum_probs=68.7
Q ss_pred HHHHHHhccCCCCCeeeEEeccccccchhhhccCCCeEEEEeccCCCC-chhHHHHhhccc-ccccccCCC-C--C-CCC
Q 039518 454 VRHYWQLMNVNETEIRNAMDMNAYCGGFAVALNSLPVWVMNIVPISMK-NTLSAIYNRGIL-GAFHDWCEP-F--S-TYP 527 (617)
Q Consensus 454 v~~y~~~~~~~~~~~Rn~mDm~~~~g~faa~l~~~~v~vmnv~p~~~~-~~l~~~~~RGli-g~~~~~~~~-f--~-typ 527 (617)
+....+.+++..+ ..|||+|||.|.++..|.++.- .|+-.|.. .-+..+-++--- .+-.+|... + + ..+
T Consensus 34 ~~~il~~l~l~~g--~~VLDlGcGtG~~a~~La~~g~---~V~gvD~S~~ml~~Ar~~~~~~~v~~~~~~~~~~~~~~~~ 108 (261)
T 3iv6_A 34 RENDIFLENIVPG--STVAVIGASTRFLIEKALERGA---SVTVFDFSQRMCDDLAEALADRCVTIDLLDITAEIPKELA 108 (261)
T ss_dssp HHHHHHTTTCCTT--CEEEEECTTCHHHHHHHHHTTC---EEEEEESCHHHHHHHHHHTSSSCCEEEECCTTSCCCGGGT
T ss_pred HHHHHHhcCCCCc--CEEEEEeCcchHHHHHHHhcCC---EEEEEECCHHHHHHHHHHHHhccceeeeeecccccccccC
Confidence 3333444445554 5799999999999999876643 23334444 556555554310 122333221 1 1 124
Q ss_pred CccchhhccccccccccCCCCCChhhHHhhhhhcccCCceEEEe
Q 039518 528 RTYDLLHANHLFSHYKNRGEVCSLEDIMLEMDLIIRPQGFIIIR 571 (617)
Q Consensus 528 rtyDl~H~~~~~s~~~~~~~~c~~~~~l~e~dRilRP~G~~i~~ 571 (617)
.+||+|-++.++.++ . .=....+|-+|-|+| |||.++++
T Consensus 109 ~~fD~Vv~~~~l~~~---~-~~~~~~~l~~l~~lL-PGG~l~lS 147 (261)
T 3iv6_A 109 GHFDFVLNDRLINRF---T-TEEARRACLGMLSLV-GSGTVRAS 147 (261)
T ss_dssp TCCSEEEEESCGGGS---C-HHHHHHHHHHHHHHH-TTSEEEEE
T ss_pred CCccEEEEhhhhHhC---C-HHHHHHHHHHHHHhC-cCcEEEEE
Confidence 689999999888754 1 113457899999999 99999998
No 400
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=97.30 E-value=0.00016 Score=74.93 Aligned_cols=135 Identities=13% Similarity=0.175 Sum_probs=84.2
Q ss_pred CCCCCeeeEEeccccccchhhhccC--CCeEEEEeccCCCCchhHHHHh----hcccc----cccccCCCCCCCCCccch
Q 039518 463 VNETEIRNAMDMNAYCGGFAVALNS--LPVWVMNIVPISMKNTLSAIYN----RGILG----AFHDWCEPFSTYPRTYDL 532 (617)
Q Consensus 463 ~~~~~~Rn~mDm~~~~g~faa~l~~--~~v~vmnv~p~~~~~~l~~~~~----RGlig----~~~~~~~~f~typrtyDl 532 (617)
+......+|+|+|||.|.++.+|.+ ..+-+..+ |-+..+..+-+ .|+-+ +-+|..+++ |..||+
T Consensus 165 ~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~---D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~---p~~~D~ 238 (332)
T 3i53_A 165 YDWAALGHVVDVGGGSGGLLSALLTAHEDLSGTVL---DLQGPASAAHRRFLDTGLSGRAQVVVGSFFDPL---PAGAGG 238 (332)
T ss_dssp SCCGGGSEEEEETCTTSHHHHHHHHHCTTCEEEEE---ECHHHHHHHHHHHHHTTCTTTEEEEECCTTSCC---CCSCSE
T ss_pred CCCCCCCEEEEeCCChhHHHHHHHHHCCCCeEEEe---cCHHHHHHHHHhhhhcCcCcCeEEecCCCCCCC---CCCCcE
Confidence 4556678999999999999988864 22222222 33344444332 35421 234444444 458999
Q ss_pred hhccccccccccCCCCCChhhHHhhhhhcccCCceEEEecCh----------------------HHHHHHHhhhhcCCce
Q 039518 533 LHANHLFSHYKNRGEVCSLEDIMLEMDLIIRPQGFIIIRDEK----------------------SLITRIRDLAPKFLWD 590 (617)
Q Consensus 533 ~H~~~~~s~~~~~~~~c~~~~~l~e~dRilRP~G~~i~~d~~----------------------~~~~~~~~~~~~~~W~ 590 (617)
|.+.+++..| .+. ....+|-++=|+|+|||+++|.|.. ...++++++++.--++
T Consensus 239 v~~~~vlh~~---~~~-~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~d~~~~~~~~~~~~t~~e~~~ll~~aGf~ 314 (332)
T 3i53_A 239 YVLSAVLHDW---DDL-SAVAILRRCAEAAGSGGVVLVIEAVAGDEHAGTGMDLRMLTYFGGKERSLAELGELAAQAGLA 314 (332)
T ss_dssp EEEESCGGGS---CHH-HHHHHHHHHHHHHTTTCEEEEEECCCC---CCHHHHHHHHHHHSCCCCCHHHHHHHHHHTTEE
T ss_pred EEEehhhccC---CHH-HHHHHHHHHHHhcCCCCEEEEEeecCCCCCccHHHHHHHHhhCCCCCCCHHHHHHHHHHCCCE
Confidence 9999998866 211 2357999999999999999997531 1134566666666676
Q ss_pred EEEeeccccCCCceeEEEEEe
Q 039518 591 VELHSLENREKKMESVLICRK 611 (617)
Q Consensus 591 ~~~~~~e~~~~~~~~~l~~~k 611 (617)
......- ++ ..|+.++|
T Consensus 315 ~~~~~~~-~~---~~vie~r~ 331 (332)
T 3i53_A 315 VRAAHPI-SY---VSIVEMTA 331 (332)
T ss_dssp EEEEEEC-SS---SEEEEEEE
T ss_pred EEEEEEC-CC---cEEEEEee
Confidence 5444321 11 56676665
No 401
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=97.29 E-value=0.00017 Score=69.67 Aligned_cols=122 Identities=14% Similarity=0.179 Sum_probs=72.7
Q ss_pred eeEEeccccccchhhhccCC--CeEEEEeccCCCC-chhHHHHh----hcc--ccc-ccccCCCCCC-C-CCccchhhcc
Q 039518 469 RNAMDMNAYCGGFAVALNSL--PVWVMNIVPISMK-NTLSAIYN----RGI--LGA-FHDWCEPFST-Y-PRTYDLLHAN 536 (617)
Q Consensus 469 Rn~mDm~~~~g~faa~l~~~--~v~vmnv~p~~~~-~~l~~~~~----RGl--ig~-~~~~~~~f~t-y-prtyDl~H~~ 536 (617)
..|||+|||.|.|+.+|... .. +|+-.|-. ..+..+-+ .|+ +-+ ..|..+ ++. + +.+||+|.++
T Consensus 43 ~~vLDiGcG~G~~~~~la~~~p~~---~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~-~~~~~~~~~~D~i~~~ 118 (214)
T 1yzh_A 43 PIHVEVGSGKGAFVSGMAKQNPDI---NYIGIDIQKSVLSYALDKVLEVGVPNIKLLWVDGSD-LTDYFEDGEIDRLYLN 118 (214)
T ss_dssp CEEEEESCTTSHHHHHHHHHCTTS---EEEEEESCHHHHHHHHHHHHHHCCSSEEEEECCSSC-GGGTSCTTCCSEEEEE
T ss_pred CeEEEEccCcCHHHHHHHHHCCCC---CEEEEEcCHHHHHHHHHHHHHcCCCCEEEEeCCHHH-HHhhcCCCCCCEEEEE
Confidence 46999999999999888543 22 22333333 44444433 343 112 233333 321 3 3789999976
Q ss_pred ccccccc--cCCCCCChhhHHhhhhhcccCCceEEEe-cChHHHHHHHhhhhcCCceEEEe
Q 039518 537 HLFSHYK--NRGEVCSLEDIMLEMDLIIRPQGFIIIR-DEKSLITRIRDLAPKFLWDVELH 594 (617)
Q Consensus 537 ~~~s~~~--~~~~~c~~~~~l~e~dRilRP~G~~i~~-d~~~~~~~~~~~~~~~~W~~~~~ 594 (617)
......+ .+..+=....+|-++-|+|+|||.+++. |..+..+.+.+++....|+....
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~g~~~~~~ 179 (214)
T 1yzh_A 119 FSDPWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFKTDNRGLFEYSLVSFSQYGMKLNGV 179 (214)
T ss_dssp SCCCCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHHTCEEEEE
T ss_pred CCCCccccchhhhccCCHHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHCCCeeeec
Confidence 3321100 0011222357899999999999999997 45566677777776666766544
No 402
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=97.28 E-value=8.4e-05 Score=76.30 Aligned_cols=102 Identities=11% Similarity=0.046 Sum_probs=62.0
Q ss_pred eeeEEeccccccchhhhccCCCeEEEEeccCCCC-chhHHHHhhc--------------ccccccccCC-----CCCCCC
Q 039518 468 IRNAMDMNAYCGGFAVALNSLPVWVMNIVPISMK-NTLSAIYNRG--------------ILGAFHDWCE-----PFSTYP 527 (617)
Q Consensus 468 ~Rn~mDm~~~~g~faa~l~~~~v~vmnv~p~~~~-~~l~~~~~RG--------------lig~~~~~~~-----~f~typ 527 (617)
-.+|||+|||.|.++..|...+.. +|+-.|-. ..+..+-+|- +--+..|..+ +|+.-+
T Consensus 35 ~~~VLDlGcG~G~~~~~l~~~~~~--~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 112 (313)
T 3bgv_A 35 DITVLDLGCGKGGDLLKWKKGRIN--KLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKELLIDKFRDPQ 112 (313)
T ss_dssp CCEEEEETCTTTTTHHHHHHTTCS--EEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCSTTTCSSTT
T ss_pred CCEEEEECCCCcHHHHHHHhcCCC--EEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecccccchhhhcccCC
Confidence 358999999999999988765432 33334444 4555554441 1112222222 132223
Q ss_pred CccchhhccccccccccCCCCCChhhHHhhhhhcccCCceEEEecC
Q 039518 528 RTYDLLHANHLFSHYKNRGEVCSLEDIMLEMDLIIRPQGFIIIRDE 573 (617)
Q Consensus 528 rtyDl~H~~~~~s~~~~~~~~c~~~~~l~e~dRilRP~G~~i~~d~ 573 (617)
.+||+|-+..++... -.+.-....+|-|+-|+|+|||.+++...
T Consensus 113 ~~fD~V~~~~~l~~~--~~~~~~~~~~l~~~~~~LkpgG~li~~~~ 156 (313)
T 3bgv_A 113 MCFDICSCQFVCHYS--FESYEQADMMLRNACERLSPGGYFIGTTP 156 (313)
T ss_dssp CCEEEEEEETCGGGG--GGSHHHHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred CCEEEEEEecchhhc--cCCHHHHHHHHHHHHHHhCCCcEEEEecC
Confidence 599999987665310 00112245789999999999999999843
No 403
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=97.27 E-value=4e-05 Score=78.36 Aligned_cols=46 Identities=15% Similarity=0.225 Sum_probs=33.4
Q ss_pred CCccchhhccccccccccCCCCCChhhHHhhhhhcccCCceEEEec
Q 039518 527 PRTYDLLHANHLFSHYKNRGEVCSLEDIMLEMDLIIRPQGFIIIRD 572 (617)
Q Consensus 527 prtyDl~H~~~~~s~~~~~~~~c~~~~~l~e~dRilRP~G~~i~~d 572 (617)
+.+||+|.+.+++......-+.-.+..++-++-|+|||||++|+..
T Consensus 175 ~~~fD~I~~~~vl~~ihl~~~~~~~~~~l~~~~~~LkpGG~lil~~ 220 (292)
T 3g07_A 175 TPEYDVVLCLSLTKWVHLNWGDEGLKRMFRRIYRHLRPGGILVLEP 220 (292)
T ss_dssp CCCEEEEEEESCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEC
T ss_pred CCCcCEEEEChHHHHhhhcCCHHHHHHHHHHHHHHhCCCcEEEEec
Confidence 4899999988887422000022345678999999999999999963
No 404
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=97.24 E-value=0.00027 Score=74.03 Aligned_cols=98 Identities=14% Similarity=0.200 Sum_probs=63.8
Q ss_pred CCCCCeeeEEeccccccchhhhccCC----CeEEEEeccCCCCchhHHHHhh----cccc----cccccCCCCCCCCCcc
Q 039518 463 VNETEIRNAMDMNAYCGGFAVALNSL----PVWVMNIVPISMKNTLSAIYNR----GILG----AFHDWCEPFSTYPRTY 530 (617)
Q Consensus 463 ~~~~~~Rn~mDm~~~~g~faa~l~~~----~v~vmnv~p~~~~~~l~~~~~R----Glig----~~~~~~~~f~typrty 530 (617)
+......+|+|+|||.|.++.+|.+. .+..+-+ +..+..+-++ |+-+ +-+|..+. .+|. +
T Consensus 186 ~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-----~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~--~~~~-~ 257 (359)
T 1x19_A 186 AKLDGVKKMIDVGGGIGDISAAMLKHFPELDSTILNL-----PGAIDLVNENAAEKGVADRMRGIAVDIYKE--SYPE-A 257 (359)
T ss_dssp CCCTTCCEEEEESCTTCHHHHHHHHHCTTCEEEEEEC-----GGGHHHHHHHHHHTTCTTTEEEEECCTTTS--CCCC-C
T ss_pred cCCCCCCEEEEECCcccHHHHHHHHHCCCCeEEEEec-----HHHHHHHHHHHHhcCCCCCEEEEeCccccC--CCCC-C
Confidence 34455689999999999999998643 2343333 3344444333 5432 23344332 2233 4
Q ss_pred chhhccccccccccCCCCCChhhHHhhhhhcccCCceEEEec
Q 039518 531 DLLHANHLFSHYKNRGEVCSLEDIMLEMDLIIRPQGFIIIRD 572 (617)
Q Consensus 531 Dl~H~~~~~s~~~~~~~~c~~~~~l~e~dRilRP~G~~i~~d 572 (617)
|+|.+..++..| .+ -....+|-++-|+|+|||.++|.|
T Consensus 258 D~v~~~~vlh~~---~d-~~~~~~l~~~~~~L~pgG~l~i~e 295 (359)
T 1x19_A 258 DAVLFCRILYSA---NE-QLSTIMCKKAFDAMRSGGRLLILD 295 (359)
T ss_dssp SEEEEESCGGGS---CH-HHHHHHHHHHHTTCCTTCEEEEEE
T ss_pred CEEEEechhccC---CH-HHHHHHHHHHHHhcCCCCEEEEEe
Confidence 999998888766 21 124578999999999999998865
No 405
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=97.24 E-value=0.00014 Score=70.56 Aligned_cols=126 Identities=15% Similarity=0.149 Sum_probs=73.2
Q ss_pred eeEEeccccccchhhhccCC---CeEEEEeccCCCC-chhHHHHh----hcccc---cc-cccCCCCCCCC-----Cccc
Q 039518 469 RNAMDMNAYCGGFAVALNSL---PVWVMNIVPISMK-NTLSAIYN----RGILG---AF-HDWCEPFSTYP-----RTYD 531 (617)
Q Consensus 469 Rn~mDm~~~~g~faa~l~~~---~v~vmnv~p~~~~-~~l~~~~~----RGlig---~~-~~~~~~f~typ-----rtyD 531 (617)
.+|||+|||.|.++.+|... ..-|..| |.. ..+..+-+ .|+-. ++ .|..+.++..+ .+||
T Consensus 66 ~~vLdiG~G~G~~~~~la~~~~~~~~v~~v---D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD 142 (225)
T 3tr6_A 66 KKVIDIGTFTGYSAIAMGLALPKDGTLITC---DVDEKSTALAKEYWEKAGLSDKIGLRLSPAKDTLAELIHAGQAWQYD 142 (225)
T ss_dssp SEEEEECCTTSHHHHHHHTTCCTTCEEEEE---ESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHTTTCTTCEE
T ss_pred CEEEEeCCcchHHHHHHHHhCCCCCEEEEE---eCCHHHHHHHHHHHHHCCCCCceEEEeCCHHHHHHHhhhccCCCCcc
Confidence 48999999999999988764 3322222 222 33333332 24422 11 23323322222 6899
Q ss_pred hhhccccccccccCCCCCChhhHHhhhhhcccCCceEEEecCh------------HHHHHHHh----hhhcCCceEEEee
Q 039518 532 LLHANHLFSHYKNRGEVCSLEDIMLEMDLIIRPQGFIIIRDEK------------SLITRIRD----LAPKFLWDVELHS 595 (617)
Q Consensus 532 l~H~~~~~s~~~~~~~~c~~~~~l~e~dRilRP~G~~i~~d~~------------~~~~~~~~----~~~~~~W~~~~~~ 595 (617)
+|..+.-.. ....++-++=|+|||||++++.|-. .....+++ +...-+|+.....
T Consensus 143 ~v~~~~~~~---------~~~~~l~~~~~~L~pgG~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lp 213 (225)
T 3tr6_A 143 LIYIDADKA---------NTDLYYEESLKLLREGGLIAVDNVLRRGQVADEENQSENNQLIRLFNQKVYKDERVDMILIP 213 (225)
T ss_dssp EEEECSCGG---------GHHHHHHHHHHHEEEEEEEEEECSSGGGGGGCTTCCCHHHHHHHHHHHHHHHCTTEEEEEEC
T ss_pred EEEECCCHH---------HHHHHHHHHHHhcCCCcEEEEeCCCcCCcccCccccChHHHHHHHHHHHHhcCCCeEEEEEE
Confidence 998544322 2346788888999999999996432 11223333 3344467766653
Q ss_pred ccccCCCceeEEEEEec
Q 039518 596 LENREKKMESVLICRKK 612 (617)
Q Consensus 596 ~e~~~~~~~~~l~~~k~ 612 (617)
. .+.+++++|+
T Consensus 214 ~------~dG~~~~~k~ 224 (225)
T 3tr6_A 214 I------GDGLTLARKK 224 (225)
T ss_dssp S------TTCEEEEEEC
T ss_pred c------CCccEEEEEC
Confidence 2 3568888874
No 406
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=97.22 E-value=0.00016 Score=75.36 Aligned_cols=95 Identities=11% Similarity=0.122 Sum_probs=59.6
Q ss_pred eeEEeccccccchhhhccCCCe-EEEEeccCCCCchhHHH----Hhhcc---cccccccCCCCCCCC-Cccchhhccccc
Q 039518 469 RNAMDMNAYCGGFAVALNSLPV-WVMNIVPISMKNTLSAI----YNRGI---LGAFHDWCEPFSTYP-RTYDLLHANHLF 539 (617)
Q Consensus 469 Rn~mDm~~~~g~faa~l~~~~v-~vmnv~p~~~~~~l~~~----~~RGl---ig~~~~~~~~f~typ-rtyDl~H~~~~~ 539 (617)
.+|||+|||.|.++..+...+. -|.-|=.. ..+..+ -+.|+ |-+++.-.+.++ .| ..||+|.+..++
T Consensus 40 ~~VLDiGcGtG~ls~~la~~g~~~v~~vD~s---~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~-~~~~~~D~Ivs~~~~ 115 (328)
T 1g6q_1 40 KIVLDVGCGTGILSMFAAKHGAKHVIGVDMS---SIIEMAKELVELNGFSDKITLLRGKLEDVH-LPFPKVDIIISEWMG 115 (328)
T ss_dssp CEEEEETCTTSHHHHHHHHTCCSEEEEEESS---THHHHHHHHHHHTTCTTTEEEEESCTTTSC-CSSSCEEEEEECCCB
T ss_pred CEEEEecCccHHHHHHHHHCCCCEEEEEChH---HHHHHHHHHHHHcCCCCCEEEEECchhhcc-CCCCcccEEEEeCch
Confidence 4899999999999888876543 23333332 123332 23354 223332223332 35 789999987654
Q ss_pred cccccCCCCCChhhHHhhhhhcccCCceEEE
Q 039518 540 SHYKNRGEVCSLEDIMLEMDLIIRPQGFIII 570 (617)
Q Consensus 540 s~~~~~~~~c~~~~~l~e~dRilRP~G~~i~ 570 (617)
... ...-.+..+|-+++|+|+|||.+|.
T Consensus 116 ~~l---~~~~~~~~~l~~~~~~LkpgG~li~ 143 (328)
T 1g6q_1 116 YFL---LYESMMDTVLYARDHYLVEGGLIFP 143 (328)
T ss_dssp TTB---STTCCHHHHHHHHHHHEEEEEEEES
T ss_pred hhc---ccHHHHHHHHHHHHhhcCCCeEEEE
Confidence 422 2334567889999999999999983
No 407
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=97.22 E-value=0.00032 Score=72.49 Aligned_cols=133 Identities=11% Similarity=0.075 Sum_probs=82.9
Q ss_pred CCCCCeeeEEeccccccchhhhccCC----CeEEEEeccCCCCchhHHHHh----hcc----cccccccCCCCCCCCCcc
Q 039518 463 VNETEIRNAMDMNAYCGGFAVALNSL----PVWVMNIVPISMKNTLSAIYN----RGI----LGAFHDWCEPFSTYPRTY 530 (617)
Q Consensus 463 ~~~~~~Rn~mDm~~~~g~faa~l~~~----~v~vmnv~p~~~~~~l~~~~~----RGl----ig~~~~~~~~f~typrty 530 (617)
++... .+|+|+|||.|.++.+|.+. .+..+-+ | ..+..+-+ .|+ --+-+|..++ +|..|
T Consensus 164 ~~~~~-~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~----~~~~~a~~~~~~~~~~~~v~~~~~d~~~~---~~~~~ 234 (334)
T 2ip2_A 164 LDFRG-RSFVDVGGGSGELTKAILQAEPSARGVMLDR-E----GSLGVARDNLSSLLAGERVSLVGGDMLQE---VPSNG 234 (334)
T ss_dssp SCCTT-CEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-T----TCTHHHHHHTHHHHHTTSEEEEESCTTTC---CCSSC
T ss_pred CCCCC-CEEEEeCCCchHHHHHHHHHCCCCEEEEeCc-H----HHHHHHHHHHhhcCCCCcEEEecCCCCCC---CCCCC
Confidence 34445 89999999999999988643 3444444 3 23333322 232 2234455443 56789
Q ss_pred chhhccccccccccCCCCCChhhHHhhhhhcccCCceEEEecCh-------------H------------HHHHHHhhhh
Q 039518 531 DLLHANHLFSHYKNRGEVCSLEDIMLEMDLIIRPQGFIIIRDEK-------------S------------LITRIRDLAP 585 (617)
Q Consensus 531 Dl~H~~~~~s~~~~~~~~c~~~~~l~e~dRilRP~G~~i~~d~~-------------~------------~~~~~~~~~~ 585 (617)
|+|.+..++.+| .+ =....+|-++-|+|+|||+++|.|.. + ..++++++++
T Consensus 235 D~v~~~~vl~~~---~~-~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~ 310 (334)
T 2ip2_A 235 DIYLLSRIIGDL---DE-AASLRLLGNCREAMAGDGRVVVIERTISASEPSPMSVLWDVHLFMACAGRHRTTEEVVDLLG 310 (334)
T ss_dssp SEEEEESCGGGC---CH-HHHHHHHHHHHHHSCTTCEEEEEECCBCSSSCCHHHHHHHHHHHHHHSCCCCBHHHHHHHHH
T ss_pred CEEEEchhccCC---CH-HHHHHHHHHHHHhcCCCCEEEEEEeccCCCCCcchhHHhhhHhHhhCCCcCCCHHHHHHHHH
Confidence 999999888766 11 12247999999999999999997421 0 1344566666
Q ss_pred cCCceEEEeeccccCCCceeEEEEEe
Q 039518 586 KFLWDVELHSLENREKKMESVLICRK 611 (617)
Q Consensus 586 ~~~W~~~~~~~e~~~~~~~~~l~~~k 611 (617)
.--++......-. ....++.++|
T Consensus 311 ~aGf~~~~~~~~~---~~~~~i~~~~ 333 (334)
T 2ip2_A 311 RGGFAVERIVDLP---METRMIVAAR 333 (334)
T ss_dssp HTTEEEEEEEEET---TTEEEEEEEE
T ss_pred HCCCceeEEEECC---CCCEEEEEEe
Confidence 6666654332211 2356777776
No 408
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=97.21 E-value=0.00014 Score=73.07 Aligned_cols=43 Identities=7% Similarity=0.101 Sum_probs=33.1
Q ss_pred CccchhhccccccccccCCCCCChhhHHhhhhhcccCCceEEEec
Q 039518 528 RTYDLLHANHLFSHYKNRGEVCSLEDIMLEMDLIIRPQGFIIIRD 572 (617)
Q Consensus 528 rtyDl~H~~~~~s~~~~~~~~c~~~~~l~e~dRilRP~G~~i~~d 572 (617)
.+||+|-+..++.+. ..+.=.+..+|-||-|+|||||++|+++
T Consensus 155 ~~fD~V~~~~~l~~i--~~~~~~~~~~l~~i~r~LKPGG~li~~~ 197 (263)
T 2a14_A 155 PLADCVLTLLAMECA--CCSLDAYRAALCNLASLLKPGGHLVTTV 197 (263)
T ss_dssp CCEEEEEEESCHHHH--CSSHHHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred CCCCEeeehHHHHHh--cCCHHHHHHHHHHHHHHcCCCcEEEEEE
Confidence 589999999888743 0111234578999999999999999984
No 409
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=97.20 E-value=0.00023 Score=69.77 Aligned_cols=133 Identities=14% Similarity=0.160 Sum_probs=71.3
Q ss_pred eeEEeccccccchhhhccCC-----CeEEEEeccCCCCchhHHHHhh-cccccccccCCC--CCCCCCccchhhcccccc
Q 039518 469 RNAMDMNAYCGGFAVALNSL-----PVWVMNIVPISMKNTLSAIYNR-GILGAFHDWCEP--FSTYPRTYDLLHANHLFS 540 (617)
Q Consensus 469 Rn~mDm~~~~g~faa~l~~~-----~v~vmnv~p~~~~~~l~~~~~R-Glig~~~~~~~~--f~typrtyDl~H~~~~~s 540 (617)
.+|||+|||.|.|+..|.+. .|..+-+.|.--...+..+-++ ++--+..|..+. ++..+.+||+|.++.. .
T Consensus 79 ~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~~~~v~~~~~d~~~~~~~~~~~~~~D~V~~~~~-~ 157 (233)
T 2ipx_A 79 AKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKRTNIIPVIEDARHPHKYRMLIAMVDVIFADVA-Q 157 (233)
T ss_dssp CEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHCTTEEEECSCTTCGGGGGGGCCCEEEEEECCC-C
T ss_pred CEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhccCCeEEEEcccCChhhhcccCCcEEEEEEcCC-C
Confidence 48999999999999988654 2333322211001122233332 232233344332 2222468999986432 1
Q ss_pred ccccCCCCCCh-hhHHhhhhhcccCCceEEEecChH----------HHHHHHhhhhcCCceEEE-eeccccCCCceeEEE
Q 039518 541 HYKNRGEVCSL-EDIMLEMDLIIRPQGFIIIRDEKS----------LITRIRDLAPKFLWDVEL-HSLENREKKMESVLI 608 (617)
Q Consensus 541 ~~~~~~~~c~~-~~~l~e~dRilRP~G~~i~~d~~~----------~~~~~~~~~~~~~W~~~~-~~~e~~~~~~~~~l~ 608 (617)
... ..++.++-|+|+|||.+++.-... +..+..++++...|+... .+.+..+ ...-+++
T Consensus 158 --------~~~~~~~~~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~~~-~~~~~v~ 228 (233)
T 2ipx_A 158 --------PDQTRIVALNAHTFLRNGGHFVISIKANCIDSTASAEAVFASEVKKMQQENMKPQEQLTLEPYE-RDHAVVV 228 (233)
T ss_dssp --------TTHHHHHHHHHHHHEEEEEEEEEEEEHHHHCSSSCHHHHHHHHHHTTGGGTEEEEEEEECTTTS-SSEEEEE
T ss_pred --------ccHHHHHHHHHHHHcCCCeEEEEEEcccccccCCCHHHHHHHHHHHHHHCCCceEEEEecCCcc-CCcEEEE
Confidence 111 245778999999999999963221 122224566666787655 3333222 2244566
Q ss_pred EEe
Q 039518 609 CRK 611 (617)
Q Consensus 609 ~~k 611 (617)
++|
T Consensus 229 ~~~ 231 (233)
T 2ipx_A 229 GVY 231 (233)
T ss_dssp EEE
T ss_pred EEe
Confidence 665
No 410
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=97.19 E-value=0.0017 Score=63.53 Aligned_cols=119 Identities=7% Similarity=-0.074 Sum_probs=74.5
Q ss_pred CeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHh----CC----CcEEEEecCCC---------------C
Q 039518 230 FQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALER----GI----GAMISALSTKQ---------------L 286 (617)
Q Consensus 230 ~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~er----g~----~~~~~~~d~~~---------------L 286 (617)
++|||+||| .-+..|++.. ...++.+|.++...+.|++. |. ++.+..+++.. +
T Consensus 32 ~~VLEiGtG--ySTl~lA~~~--~g~VvtvE~d~~~~~~ar~~l~~~g~~~~~~I~~~~gda~~~~~wg~p~~~~~~~~l 107 (202)
T 3cvo_A 32 EVILEYGSG--GSTVVAAELP--GKHVTSVESDRAWARMMKAWLAANPPAEGTEVNIVWTDIGPTGDWGHPVSDAKWRSY 107 (202)
T ss_dssp SEEEEESCS--HHHHHHHTST--TCEEEEEESCHHHHHHHHHHHHHSCCCTTCEEEEEECCCSSBCGGGCBSSSTTGGGT
T ss_pred CEEEEECch--HHHHHHHHcC--CCEEEEEeCCHHHHHHHHHHHHHcCCCCCCceEEEEeCchhhhcccccccchhhhhH
Confidence 359999985 5677777641 12567778999998888763 54 46777777532 2
Q ss_pred C--------C-CCCCeeEEEecccccccccchHHHHHHHHHhccCCeEEEEEeCCCCCCCCCChhhHHHHHHHHHHcCce
Q 039518 287 P--------Y-PSSSFEMVHCSRCRVDWHANDGILLKEVDRVLRPNGYFVYSAPPAYRKDKDYPLIWDKLVNLTTAMCWK 357 (617)
Q Consensus 287 p--------f-~d~sFDlV~~s~~l~h~~~d~~~~L~el~RvLrPGG~Liis~p~~~~~~~~~~~~W~~le~La~~~gw~ 357 (617)
+ . ..++||+|+.-. ......+..+.+.|+|||.+++.. ..+... |..++++ ++
T Consensus 108 ~~~~~~i~~~~~~~~fDlIfIDg------~k~~~~~~~~l~~l~~GG~Iv~DN--v~~r~~-----y~~v~~~-----~~ 169 (202)
T 3cvo_A 108 PDYPLAVWRTEGFRHPDVVLVDG------RFRVGCALATAFSITRPVTLLFDD--YSQRRW-----QHQVEEF-----LG 169 (202)
T ss_dssp THHHHGGGGCTTCCCCSEEEECS------SSHHHHHHHHHHHCSSCEEEEETT--GGGCSS-----GGGGHHH-----HC
T ss_pred HHHhhhhhccccCCCCCEEEEeC------CCchhHHHHHHHhcCCCeEEEEeC--CcCCcc-----hHHHHHH-----Hh
Confidence 2 1 237899998542 123466777889999999996621 111211 2334444 34
Q ss_pred EEEEeeeeEEEee
Q 039518 358 LIARKIQTAIWIK 370 (617)
Q Consensus 358 ~v~~~~~~~IwqK 370 (617)
.+...+..++|..
T Consensus 170 ~~~~~~~~a~f~~ 182 (202)
T 3cvo_A 170 APLMIGRLAAFQV 182 (202)
T ss_dssp CCEEETTEEEEEE
T ss_pred HHhhcCceEEEEe
Confidence 4445567777776
No 411
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=97.19 E-value=0.00016 Score=72.69 Aligned_cols=119 Identities=6% Similarity=-0.001 Sum_probs=74.7
Q ss_pred eeEEeccccccchhhhccCCCeEEEEeccCCCC-chhHHHHhhc-c-------------------cccccccCCCCCCCC
Q 039518 469 RNAMDMNAYCGGFAVALNSLPVWVMNIVPISMK-NTLSAIYNRG-I-------------------LGAFHDWCEPFSTYP 527 (617)
Q Consensus 469 Rn~mDm~~~~g~faa~l~~~~v~vmnv~p~~~~-~~l~~~~~RG-l-------------------ig~~~~~~~~f~typ 527 (617)
..|||+|||.|.++..|.+... +|+-.|-. .-+..+.++- + -.-..-.|.-+...|
T Consensus 70 ~~vLD~GCG~G~~~~~La~~G~---~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~~~l~ 146 (252)
T 2gb4_A 70 LRVFFPLCGKAIEMKWFADRGH---TVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSIFDLP 146 (252)
T ss_dssp CEEEETTCTTCTHHHHHHHTTC---EEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCTTTGG
T ss_pred CeEEEeCCCCcHHHHHHHHCCC---eEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECccccCC
Confidence 4799999999999999988765 34445555 5555554431 1 011111222232222
Q ss_pred ----CccchhhccccccccccCCCCCChhhHHhhhhhcccCCceEEEec----C--------hHHHHHHHhhhhcCCceE
Q 039518 528 ----RTYDLLHANHLFSHYKNRGEVCSLEDIMLEMDLIIRPQGFIIIRD----E--------KSLITRIRDLAPKFLWDV 591 (617)
Q Consensus 528 ----rtyDl~H~~~~~s~~~~~~~~c~~~~~l~e~dRilRP~G~~i~~d----~--------~~~~~~~~~~~~~~~W~~ 591 (617)
.+||+|-+.++|... .......++-||-|+|||||.+++-. . .-..++++++... .|++
T Consensus 147 ~~~~~~FD~V~~~~~l~~l----~~~~~~~~l~~~~~~LkpGG~l~l~~~~~~~~~~~g~~~~~~~~el~~~l~~-~f~v 221 (252)
T 2gb4_A 147 RANIGKFDRIWDRGALVAI----NPGDHDRYADIILSLLRKEFQYLVAVLSYDPTKHAGPPFYVPSAELKRLFGT-KCSM 221 (252)
T ss_dssp GGCCCCEEEEEESSSTTTS----CGGGHHHHHHHHHHTEEEEEEEEEEEEECCTTSCCCSSCCCCHHHHHHHHTT-TEEE
T ss_pred cccCCCEEEEEEhhhhhhC----CHHHHHHHHHHHHHHcCCCeEEEEEEEecCCccCCCCCCCCCHHHHHHHhhC-CeEE
Confidence 689999987777643 22344578999999999999996421 0 0124667777766 4877
Q ss_pred EEee
Q 039518 592 ELHS 595 (617)
Q Consensus 592 ~~~~ 595 (617)
....
T Consensus 222 ~~~~ 225 (252)
T 2gb4_A 222 QCLE 225 (252)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 6554
No 412
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=97.19 E-value=0.0002 Score=73.95 Aligned_cols=100 Identities=8% Similarity=0.087 Sum_probs=59.8
Q ss_pred eeEEeccccccchhhhccCCCeEEEEeccCCCC-chhHHHHhh----ccc------c-cc-cccC------CCCC-CC-C
Q 039518 469 RNAMDMNAYCGGFAVALNSLPVWVMNIVPISMK-NTLSAIYNR----GIL------G-AF-HDWC------EPFS-TY-P 527 (617)
Q Consensus 469 Rn~mDm~~~~g~faa~l~~~~v~vmnv~p~~~~-~~l~~~~~R----Gli------g-~~-~~~~------~~f~-ty-p 527 (617)
..|||+|||.|+....+...... +|+=.|-. .-|..+-+| |+- . .| ...+ +.++ .+ +
T Consensus 50 ~~VLDlGCG~G~~l~~~~~~~~~--~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~~~~~~ 127 (302)
T 2vdw_A 50 RKVLAIDFGNGADLEKYFYGEIA--LLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSSVREVFYF 127 (302)
T ss_dssp CEEEETTCTTTTTHHHHHHTTCS--EEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHHHHTTCCS
T ss_pred CeEEEEecCCcHhHHHHHhcCCC--eEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcccchhhhhhhccccC
Confidence 57999999999977666544432 23444544 555555554 220 0 01 1111 2111 12 3
Q ss_pred CccchhhccccccccccCCCCCChhhHHhhhhhcccCCceEEEecC
Q 039518 528 RTYDLLHANHLFSHYKNRGEVCSLEDIMLEMDLIIRPQGFIIIRDE 573 (617)
Q Consensus 528 rtyDl~H~~~~~s~~~~~~~~c~~~~~l~e~dRilRP~G~~i~~d~ 573 (617)
.+||+|-+..++- |- -+.-....+|-||-|+|||||++|+...
T Consensus 128 ~~FD~V~~~~~lh-y~--~~~~~~~~~l~~~~r~LkpGG~~i~~~~ 170 (302)
T 2vdw_A 128 GKFNIIDWQFAIH-YS--FHPRHYATVMNNLSELTASGGKVLITTM 170 (302)
T ss_dssp SCEEEEEEESCGG-GT--CSTTTHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCeeEEEECchHH-Hh--CCHHHHHHHHHHHHHHcCCCCEEEEEeC
Confidence 8999998765542 20 0111357899999999999999999743
No 413
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=97.18 E-value=0.00045 Score=71.19 Aligned_cols=101 Identities=17% Similarity=0.190 Sum_probs=61.6
Q ss_pred CCCCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHH---HhCCCcEEEEecCCCCCCCCCCeeEEEeccccc
Q 039518 227 AGVFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFAL---ERGIGAMISALSTKQLPYPSSSFEMVHCSRCRV 303 (617)
Q Consensus 227 ~~g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~---erg~~~~~~~~d~~~Lpf~d~sFDlV~~s~~l~ 303 (617)
.++.+|||+||++|.|+..++++. .+..+.++|+...+..... ..+.++.....++.-..+..+.+|+|+|..+ .
T Consensus 80 ~~g~~vlDLGaaPGgWsqva~~~~-gv~sV~Gvdlg~~~~~~P~~~~~~~~~iv~~~~~~di~~l~~~~~DlVlsD~A-P 157 (300)
T 3eld_A 80 RITGRVLDLGCGRGGWSYYAAAQK-EVMSVKGYTLGIEGHEKPIHMQTLGWNIVKFKDKSNVFTMPTEPSDTLLCDIG-E 157 (300)
T ss_dssp CCCEEEEEETCTTCHHHHHHHTST-TEEEEEEECCCCTTSCCCCCCCBTTGGGEEEECSCCTTTSCCCCCSEEEECCC-C
T ss_pred CCCCEEEEcCCCCCHHHHHHHHhc-CCceeeeEEeccccccccccccccCCceEEeecCceeeecCCCCcCEEeecCc-C
Confidence 477889999999999999999863 2335667777543210000 0011222222222223345678999998643 3
Q ss_pred ccccch-------HHHHHHHHHhccCC-eEEEEEe
Q 039518 304 DWHAND-------GILLKEVDRVLRPN-GYFVYSA 330 (617)
Q Consensus 304 h~~~d~-------~~~L~el~RvLrPG-G~Liis~ 330 (617)
+ .... ..+|.-+.++|+|| |.|++-.
T Consensus 158 n-sG~~~~D~~rs~~LL~~A~~~LkpG~G~FV~Kv 191 (300)
T 3eld_A 158 S-SSNPLVERDRTMKVLENFERWKHVNTENFCVKV 191 (300)
T ss_dssp C-CSSHHHHHHHHHHHHHHHHHHCCTTCCEEEEEE
T ss_pred C-CCCHHHHHHHHHHHHHHHHHHhcCCCCcEEEEe
Confidence 3 2111 23567778999999 9999965
No 414
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=97.18 E-value=0.00072 Score=72.17 Aligned_cols=100 Identities=12% Similarity=0.022 Sum_probs=70.3
Q ss_pred CCCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHHHHHHhCC-------------CcEEEEecCCCC----CCCC
Q 039518 228 GVFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQFALERGI-------------GAMISALSTKQL----PYPS 290 (617)
Q Consensus 228 ~g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq~A~erg~-------------~~~~~~~d~~~L----pf~d 290 (617)
+.++||=||.|.|..+..+++.... .++.+|+++..++.|++... .+.+...|.... +-..
T Consensus 205 ~pkrVLIIGgGdG~~~revlkh~~~--~V~~VEIDp~VVe~ar~yfp~~~~~~~d~pr~~rv~vii~Da~~fl~~~~~~~ 282 (381)
T 3c6k_A 205 TGKDVLILGGGDGGILCEIVKLKPK--MVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEG 282 (381)
T ss_dssp TTCEEEEEECTTCHHHHHHHTTCCS--EEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHT
T ss_pred CCCeEEEECCCcHHHHHHHHhcCCc--eeEEEccCHHHHHHHHhhchhhhhhhhccccccceeeehHHHHHHHHhhhhcc
Confidence 4578999999999999999987653 67788999999999998631 145556654221 1134
Q ss_pred CCeeEEEeccccccc-ccc---------hHHHHHHHHHhccCCeEEEEEe
Q 039518 291 SSFEMVHCSRCRVDW-HAN---------DGILLKEVDRVLRPNGYFVYSA 330 (617)
Q Consensus 291 ~sFDlV~~s~~l~h~-~~d---------~~~~L~el~RvLrPGG~Liis~ 330 (617)
+.||+|+.-. .... ..+ -..+++.+.+.|+|||.++.-.
T Consensus 283 ~~yDvIIvDl-~D~~~s~~p~g~a~~Lft~eFy~~~~~~L~p~GVlv~Q~ 331 (381)
T 3c6k_A 283 REFDYVINDL-TAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQG 331 (381)
T ss_dssp CCEEEEEEEC-CSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred CceeEEEECC-CCCcccCcccCcchHHHHHHHHHHHHHhcCCCCEEEEec
Confidence 6799999531 1111 011 2457888999999999998754
No 415
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=97.17 E-value=0.00018 Score=75.20 Aligned_cols=99 Identities=12% Similarity=0.208 Sum_probs=62.4
Q ss_pred CCCCCeeeEEeccccccchhhhccC--CCeEEEEeccCCCCchhH--HHHhhcccc----cccccCCCCCCCCCccchhh
Q 039518 463 VNETEIRNAMDMNAYCGGFAVALNS--LPVWVMNIVPISMKNTLS--AIYNRGILG----AFHDWCEPFSTYPRTYDLLH 534 (617)
Q Consensus 463 ~~~~~~Rn~mDm~~~~g~faa~l~~--~~v~vmnv~p~~~~~~l~--~~~~RGlig----~~~~~~~~f~typrtyDl~H 534 (617)
+......+|+|+|||.|.++.+|.+ ..+-+..+ |-+..+. .+-+.|+-+ +-+|..++ .| +||+|.
T Consensus 180 ~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~---D~~~~~~~~~~~~~~~~~~v~~~~~d~~~~---~p-~~D~v~ 252 (348)
T 3lst_A 180 GDFPATGTVADVGGGRGGFLLTVLREHPGLQGVLL---DRAEVVARHRLDAPDVAGRWKVVEGDFLRE---VP-HADVHV 252 (348)
T ss_dssp SCCCSSEEEEEETCTTSHHHHHHHHHCTTEEEEEE---ECHHHHTTCCCCCGGGTTSEEEEECCTTTC---CC-CCSEEE
T ss_pred CCccCCceEEEECCccCHHHHHHHHHCCCCEEEEe---cCHHHhhcccccccCCCCCeEEEecCCCCC---CC-CCcEEE
Confidence 4556678999999999999998865 23322221 2121111 000123221 23344333 45 999999
Q ss_pred ccccccccccCCCCCChhhHHhhhhhcccCCceEEEec
Q 039518 535 ANHLFSHYKNRGEVCSLEDIMLEMDLIIRPQGFIIIRD 572 (617)
Q Consensus 535 ~~~~~s~~~~~~~~c~~~~~l~e~dRilRP~G~~i~~d 572 (617)
+.+++-+| .+ =....+|-|+=|+|||||.++|.|
T Consensus 253 ~~~vlh~~---~d-~~~~~~L~~~~~~LkpgG~l~i~e 286 (348)
T 3lst_A 253 LKRILHNW---GD-EDSVRILTNCRRVMPAHGRVLVID 286 (348)
T ss_dssp EESCGGGS---CH-HHHHHHHHHHHHTCCTTCEEEEEE
T ss_pred EehhccCC---CH-HHHHHHHHHHHHhcCCCCEEEEEE
Confidence 99988766 21 112478999999999999999964
No 416
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=97.17 E-value=0.00042 Score=71.33 Aligned_cols=135 Identities=16% Similarity=0.227 Sum_probs=80.8
Q ss_pred CCeeeEEeccccccchhhhccCC--CeEEEEeccCCCCchhHHHHh----hcccc----cccccCCCCCCCCCccchhhc
Q 039518 466 TEIRNAMDMNAYCGGFAVALNSL--PVWVMNIVPISMKNTLSAIYN----RGILG----AFHDWCEPFSTYPRTYDLLHA 535 (617)
Q Consensus 466 ~~~Rn~mDm~~~~g~faa~l~~~--~v~vmnv~p~~~~~~l~~~~~----RGlig----~~~~~~~~f~typrtyDl~H~ 535 (617)
..-.+|+|+|||.|.++.+|.+. ..-+.. .|-+..+..+-+ .|+-+ +-+|..+. .+|..||+|.+
T Consensus 164 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~---~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~--~~~~~~D~v~~ 238 (335)
T 2r3s_A 164 IEPLKVLDISASHGLFGIAVAQHNPNAEIFG---VDWASVLEVAKENARIQGVASRYHTIAGSAFEV--DYGNDYDLVLL 238 (335)
T ss_dssp CCCSEEEEETCTTCHHHHHHHHHCTTCEEEE---EECHHHHHHHHHHHHHHTCGGGEEEEESCTTTS--CCCSCEEEEEE
T ss_pred CCCCEEEEECCCcCHHHHHHHHHCCCCeEEE---EecHHHHHHHHHHHHhcCCCcceEEEecccccC--CCCCCCcEEEE
Confidence 34578999999999999988654 222222 222233333333 24322 22333331 24566999999
Q ss_pred cccccccccCCCCCChhhHHhhhhhcccCCceEEEecCh----------H-----------------HHHHHHhhhhcCC
Q 039518 536 NHLFSHYKNRGEVCSLEDIMLEMDLIIRPQGFIIIRDEK----------S-----------------LITRIRDLAPKFL 588 (617)
Q Consensus 536 ~~~~s~~~~~~~~c~~~~~l~e~dRilRP~G~~i~~d~~----------~-----------------~~~~~~~~~~~~~ 588 (617)
.+++..+ . .-....+|-++-|+|+|||++++.|.. . ..++++++++.--
T Consensus 239 ~~~l~~~---~-~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~ll~~aG 314 (335)
T 2r3s_A 239 PNFLHHF---D-VATCEQLLRKIKTALAVEGKVIVFDFIPNSDRITPPDAAAFSLVMLATTPNGDAYTFAEYESMFSNAG 314 (335)
T ss_dssp ESCGGGS---C-HHHHHHHHHHHHHHEEEEEEEEEEECCCCTTSSCSHHHHHHHHHHHHHSSSCCCCCHHHHHHHHHHTT
T ss_pred cchhccC---C-HHHHHHHHHHHHHhCCCCcEEEEEeecCCCCcCCchHHHHHHHHHHeeCCCCCcCCHHHHHHHHHHCC
Confidence 8888765 1 112357899999999999999886321 0 1456667777767
Q ss_pred ceEEEeeccccCCCceeEEEEEec
Q 039518 589 WDVELHSLENREKKMESVLICRKK 612 (617)
Q Consensus 589 W~~~~~~~e~~~~~~~~~l~~~k~ 612 (617)
++......-.+ ...+++++++
T Consensus 315 f~~~~~~~~~~---~~~~i~~~~~ 335 (335)
T 2r3s_A 315 FSHSQLHSLPT---TQQQVIVAYK 335 (335)
T ss_dssp CSEEEEECCTT---SSSEEEEEEC
T ss_pred CCeeeEEECCC---CceeEEEecC
Confidence 76544432222 2467777654
No 417
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=97.16 E-value=0.00057 Score=71.38 Aligned_cols=139 Identities=21% Similarity=0.242 Sum_probs=83.3
Q ss_pred CCCCeeeEEeccccccchhhhccCC--CeEEEEeccCCCCchhHHHHh----hccc----ccccccCCCCCCCCCccchh
Q 039518 464 NETEIRNAMDMNAYCGGFAVALNSL--PVWVMNIVPISMKNTLSAIYN----RGIL----GAFHDWCEPFSTYPRTYDLL 533 (617)
Q Consensus 464 ~~~~~Rn~mDm~~~~g~faa~l~~~--~v~vmnv~p~~~~~~l~~~~~----RGli----g~~~~~~~~f~typrtyDl~ 533 (617)
....-.+|+|+|||.|.++.+|.+. .+-+..+ |-+..+..+-+ .|+- =+-+|+.++ .|..||+|
T Consensus 180 ~~~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~---D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~---~~~~~D~v 253 (360)
T 1tw3_A 180 DWTNVRHVLDVGGGKGGFAAAIARRAPHVSATVL---EMAGTVDTARSYLKDEGLSDRVDVVEGDFFEP---LPRKADAI 253 (360)
T ss_dssp CCTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEE---ECTTHHHHHHHHHHHTTCTTTEEEEECCTTSC---CSSCEEEE
T ss_pred CCccCcEEEEeCCcCcHHHHHHHHhCCCCEEEEe---cCHHHHHHHHHHHHhcCCCCceEEEeCCCCCC---CCCCccEE
Confidence 3344578999999999999888643 3322222 21333433333 3432 233455544 45569999
Q ss_pred hccccccccccCCCCCChhhHHhhhhhcccCCceEEEecCh--------H------------------HHHHHHhhhhcC
Q 039518 534 HANHLFSHYKNRGEVCSLEDIMLEMDLIIRPQGFIIIRDEK--------S------------------LITRIRDLAPKF 587 (617)
Q Consensus 534 H~~~~~s~~~~~~~~c~~~~~l~e~dRilRP~G~~i~~d~~--------~------------------~~~~~~~~~~~~ 587 (617)
-+.+++.+| .+ =....+|-++-|+|+|||.++|.|.. . ..++++++++.-
T Consensus 254 ~~~~vl~~~---~~-~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~a 329 (360)
T 1tw3_A 254 ILSFVLLNW---PD-HDAVRILTRCAEALEPGGRILIHERDDLHENSFNEQFTELDLRMLVFLGGALRTREKWDGLAASA 329 (360)
T ss_dssp EEESCGGGS---CH-HHHHHHHHHHHHTEEEEEEEEEEECCBCGGGCCSHHHHHHHHHHHHHHSCCCCBHHHHHHHHHHT
T ss_pred EEcccccCC---CH-HHHHHHHHHHHHhcCCCcEEEEEEEeccCCCCCcchhhhccHHHhhhcCCcCCCHHHHHHHHHHC
Confidence 988888765 11 01246899999999999999987543 0 134566667777
Q ss_pred CceEEEeeccccC--CCceeEEEEEec
Q 039518 588 LWDVELHSLENRE--KKMESVLICRKK 612 (617)
Q Consensus 588 ~W~~~~~~~e~~~--~~~~~~l~~~k~ 612 (617)
-++......-.+. .....++.++|+
T Consensus 330 Gf~~~~~~~~~~~~~~~~~~~i~~~~~ 356 (360)
T 1tw3_A 330 GLVVEEVRQLPSPTIPYDLSLLVLAPA 356 (360)
T ss_dssp TEEEEEEEEEECSSSSCEEEEEEEEEC
T ss_pred CCeEEEEEeCCCCcccCccEEEEEEeC
Confidence 7776544322111 011567888875
No 418
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=97.14 E-value=0.00052 Score=72.44 Aligned_cols=136 Identities=14% Similarity=0.145 Sum_probs=85.7
Q ss_pred CCCCCeeeEEeccccccchhhhccCC--C--eEEEEeccCCCCchhHHHH----hhccc----ccccccCCCCCCCCCcc
Q 039518 463 VNETEIRNAMDMNAYCGGFAVALNSL--P--VWVMNIVPISMKNTLSAIY----NRGIL----GAFHDWCEPFSTYPRTY 530 (617)
Q Consensus 463 ~~~~~~Rn~mDm~~~~g~faa~l~~~--~--v~vmnv~p~~~~~~l~~~~----~RGli----g~~~~~~~~f~typrty 530 (617)
++.....+|+|+|||.|.++.+|.+. . +.+.-+ +..+..+- +.|+- =+-+|..+++ |..|
T Consensus 198 ~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-----~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~---p~~~ 269 (369)
T 3gwz_A 198 YDFSGAATAVDIGGGRGSLMAAVLDAFPGLRGTLLER-----PPVAEEARELLTGRGLADRCEILPGDFFETI---PDGA 269 (369)
T ss_dssp SCCTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-----HHHHHHHHHHHHHTTCTTTEEEEECCTTTCC---CSSC
T ss_pred CCCccCcEEEEeCCCccHHHHHHHHHCCCCeEEEEcC-----HHHHHHHHHhhhhcCcCCceEEeccCCCCCC---CCCc
Confidence 45566799999999999999988653 2 333333 33333332 33432 2234544444 4589
Q ss_pred chhhccccccccccCCCCCChhhHHhhhhhcccCCceEEEecCh------------------------HHHHHHHhhhhc
Q 039518 531 DLLHANHLFSHYKNRGEVCSLEDIMLEMDLIIRPQGFIIIRDEK------------------------SLITRIRDLAPK 586 (617)
Q Consensus 531 Dl~H~~~~~s~~~~~~~~c~~~~~l~e~dRilRP~G~~i~~d~~------------------------~~~~~~~~~~~~ 586 (617)
|+|-+.+++..|. + =....+|-++=|+|+|||+++|.|.. -..++++++++.
T Consensus 270 D~v~~~~vlh~~~---d-~~~~~~L~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~d~~~~~~~~g~~~t~~e~~~ll~~ 345 (369)
T 3gwz_A 270 DVYLIKHVLHDWD---D-DDVVRILRRIATAMKPDSRLLVIDNLIDERPAASTLFVDLLLLVLVGGAERSESEFAALLEK 345 (369)
T ss_dssp SEEEEESCGGGSC---H-HHHHHHHHHHHTTCCTTCEEEEEEEBCCSSCCHHHHHHHHHHHHHHSCCCBCHHHHHHHHHT
T ss_pred eEEEhhhhhccCC---H-HHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCchhHhhHHHHhhcCCccCCHHHHHHHHHH
Confidence 9999998887651 1 11235899999999999999996421 113556777777
Q ss_pred CCceEEEeeccccCCCceeEEEEEec
Q 039518 587 FLWDVELHSLENREKKMESVLICRKK 612 (617)
Q Consensus 587 ~~W~~~~~~~e~~~~~~~~~l~~~k~ 612 (617)
--++...... .......++.++|.
T Consensus 346 aGf~~~~~~~--~~~~~~svie~~~a 369 (369)
T 3gwz_A 346 SGLRVERSLP--CGAGPVRIVEIRRA 369 (369)
T ss_dssp TTEEEEEEEE--CSSSSEEEEEEEEC
T ss_pred CCCeEEEEEE--CCCCCcEEEEEEeC
Confidence 7787655432 11233577777763
No 419
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=97.14 E-value=0.00022 Score=74.24 Aligned_cols=138 Identities=12% Similarity=0.081 Sum_probs=84.8
Q ss_pred CCCCC-eeeEEeccccccchhhhccCC--CeEEEEeccCCCCchhHHHH----hhcccc----cccccCCCCCCCCCccc
Q 039518 463 VNETE-IRNAMDMNAYCGGFAVALNSL--PVWVMNIVPISMKNTLSAIY----NRGILG----AFHDWCEPFSTYPRTYD 531 (617)
Q Consensus 463 ~~~~~-~Rn~mDm~~~~g~faa~l~~~--~v~vmnv~p~~~~~~l~~~~----~RGlig----~~~~~~~~f~typrtyD 531 (617)
++... .++|+|+|||.|.++.+|.+. .+-+..+ |-+..+..+- +.|+-. +-+|..+.-+..|..||
T Consensus 174 ~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~---D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~D 250 (352)
T 3mcz_A 174 LGVFARARTVIDLAGGHGTYLAQVLRRHPQLTGQIW---DLPTTRDAARKTIHAHDLGGRVEFFEKNLLDARNFEGGAAD 250 (352)
T ss_dssp CGGGTTCCEEEEETCTTCHHHHHHHHHCTTCEEEEE---ECGGGHHHHHHHHHHTTCGGGEEEEECCTTCGGGGTTCCEE
T ss_pred CCCcCCCCEEEEeCCCcCHHHHHHHHhCCCCeEEEE---ECHHHHHHHHHHHHhcCCCCceEEEeCCcccCcccCCCCcc
Confidence 33444 789999999999999988643 2322222 2233333333 234422 23343332111467899
Q ss_pred hhhccccccccccCCCCCChhhHHhhhhhcccCCceEEEecC--------h-------------------HHHHHHHhhh
Q 039518 532 LLHANHLFSHYKNRGEVCSLEDIMLEMDLIIRPQGFIIIRDE--------K-------------------SLITRIRDLA 584 (617)
Q Consensus 532 l~H~~~~~s~~~~~~~~c~~~~~l~e~dRilRP~G~~i~~d~--------~-------------------~~~~~~~~~~ 584 (617)
+|.+.+++.+| .+ -....+|-++-|+|+|||.++|.|. . ...+++++++
T Consensus 251 ~v~~~~vlh~~---~~-~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll 326 (352)
T 3mcz_A 251 VVMLNDCLHYF---DA-REAREVIGHAAGLVKPGGALLILTMTMNDDRVTPALSADFSLHMMVNTNHGELHPTPWIAGVV 326 (352)
T ss_dssp EEEEESCGGGS---CH-HHHHHHHHHHHHTEEEEEEEEEEEECCCTTSSSSHHHHHHHHHHHHHSTTCCCCCHHHHHHHH
T ss_pred EEEEecccccC---CH-HHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCCchHHHhhHHHHhhCCCCCcCCHHHHHHHH
Confidence 99999988866 11 1235799999999999999999641 0 0133456666
Q ss_pred hcCCceEEEeeccccCCCceeEEEEEec
Q 039518 585 PKFLWDVELHSLENREKKMESVLICRKK 612 (617)
Q Consensus 585 ~~~~W~~~~~~~e~~~~~~~~~l~~~k~ 612 (617)
+.--++..... .+...+++++|+
T Consensus 327 ~~aGf~~~~~~-----~g~~~l~~a~kp 349 (352)
T 3mcz_A 327 RDAGLAVGERS-----IGRYTLLIGQRS 349 (352)
T ss_dssp HHTTCEEEEEE-----ETTEEEEEEECC
T ss_pred HHCCCceeeec-----cCceEEEEEecC
Confidence 66666655422 234678999986
No 420
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=97.14 E-value=0.00028 Score=68.61 Aligned_cols=133 Identities=14% Similarity=0.279 Sum_probs=70.8
Q ss_pred CCCCCeeeEEeccccccchhhhccCC-----CeEEEEeccCCCCchhHHHHh----h-cccccccccCCC--CCCCCCcc
Q 039518 463 VNETEIRNAMDMNAYCGGFAVALNSL-----PVWVMNIVPISMKNTLSAIYN----R-GILGAFHDWCEP--FSTYPRTY 530 (617)
Q Consensus 463 ~~~~~~Rn~mDm~~~~g~faa~l~~~-----~v~vmnv~p~~~~~~l~~~~~----R-Glig~~~~~~~~--f~typrty 530 (617)
+..+ .+|||+|||.|.++.+|.+. .|..+-+.| ..+..+.+ + ++--+..|..+. +...+.+|
T Consensus 71 ~~~~--~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~----~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~ 144 (227)
T 1g8a_A 71 IKPG--KSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSP----RVLRELVPIVEERRNIVPILGDATKPEEYRALVPKV 144 (227)
T ss_dssp CCTT--CEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCH----HHHHHHHHHHSSCTTEEEEECCTTCGGGGTTTCCCE
T ss_pred CCCC--CEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCH----HHHHHHHHHHhccCCCEEEEccCCCcchhhcccCCc
Confidence 4444 48999999999999888643 344332222 22222211 1 222223343331 12234689
Q ss_pred chhhccccccccccCCCCCChhhHHhhhhhcccCCceEEEecCh----------HH-HHHHHhhhhcCCceEEEe-eccc
Q 039518 531 DLLHANHLFSHYKNRGEVCSLEDIMLEMDLIIRPQGFIIIRDEK----------SL-ITRIRDLAPKFLWDVELH-SLEN 598 (617)
Q Consensus 531 Dl~H~~~~~s~~~~~~~~c~~~~~l~e~dRilRP~G~~i~~d~~----------~~-~~~~~~~~~~~~W~~~~~-~~e~ 598 (617)
|+|-++.... -....++-++-|+|+|||++++.-.. .+ -++++++... ++.... +.+.
T Consensus 145 D~v~~~~~~~--------~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~l~~l~~~--f~~~~~~~~~~ 214 (227)
T 1g8a_A 145 DVIFEDVAQP--------TQAKILIDNAEVYLKRGGYGMIAVKSRSIDVTKEPEQVFREVERELSEY--FEVIERLNLEP 214 (227)
T ss_dssp EEEEECCCST--------THHHHHHHHHHHHEEEEEEEEEEEEGGGTCTTSCHHHHHHHHHHHHHTT--SEEEEEEECTT
T ss_pred eEEEECCCCH--------hHHHHHHHHHHHhcCCCCEEEEEEecCCCCCCCChhhhhHHHHHHHHhh--ceeeeEeccCc
Confidence 9988543311 11224589999999999999985111 11 2456666333 776433 2221
Q ss_pred cCCCceeEEEEEec
Q 039518 599 REKKMESVLICRKK 612 (617)
Q Consensus 599 ~~~~~~~~l~~~k~ 612 (617)
. ....-+++++|+
T Consensus 215 ~-~~~~~~~~~~~~ 227 (227)
T 1g8a_A 215 Y-EKDHALFVVRKT 227 (227)
T ss_dssp T-SSSEEEEEEECC
T ss_pred c-cCCCEEEEEEeC
Confidence 1 122446777763
No 421
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=97.10 E-value=0.00018 Score=68.04 Aligned_cols=122 Identities=10% Similarity=0.074 Sum_probs=68.7
Q ss_pred cccchhhHHHHHHHHHHhccCCCCCeeeEEeccccccchhhhccCCCeEEEEeccCCCC-chhHHHHh----hcc--ccc
Q 039518 443 FTTDTSFWQDQVRHYWQLMNVNETEIRNAMDMNAYCGGFAVALNSLPVWVMNIVPISMK-NTLSAIYN----RGI--LGA 515 (617)
Q Consensus 443 f~~d~~~w~~~v~~y~~~~~~~~~~~Rn~mDm~~~~g~faa~l~~~~v~vmnv~p~~~~-~~l~~~~~----RGl--ig~ 515 (617)
+...++.+.+.+-++.....-..+ .+|||+|||.|.++.++.+.+.- .|+-.|.. ..+..+-+ .|+ +-+
T Consensus 22 ~rp~~~~~~~~l~~~l~~~~~~~~--~~vLDlgcG~G~~~~~~~~~~~~--~v~~vD~~~~~~~~a~~~~~~~~~~~v~~ 97 (189)
T 3p9n_A 22 TRPTTDRVRESLFNIVTARRDLTG--LAVLDLYAGSGALGLEALSRGAA--SVLFVESDQRSAAVIARNIEALGLSGATL 97 (189)
T ss_dssp C---CHHHHHHHHHHHHHHSCCTT--CEEEEETCTTCHHHHHHHHTTCS--EEEEEECCHHHHHHHHHHHHHHTCSCEEE
T ss_pred CccCcHHHHHHHHHHHHhccCCCC--CEEEEeCCCcCHHHHHHHHCCCC--eEEEEECCHHHHHHHHHHHHHcCCCceEE
Confidence 445556666666555442211223 57999999999999866655431 12222333 33333332 243 111
Q ss_pred -ccccCCCCCCC-CCccchhhccccccccccCCCCCChhhHHhhhhh--cccCCceEEEecC
Q 039518 516 -FHDWCEPFSTY-PRTYDLLHANHLFSHYKNRGEVCSLEDIMLEMDL--IIRPQGFIIIRDE 573 (617)
Q Consensus 516 -~~~~~~~f~ty-prtyDl~H~~~~~s~~~~~~~~c~~~~~l~e~dR--ilRP~G~~i~~d~ 573 (617)
..|..+....+ +.+||+|-++..|.. ..-.+..++-++-| +|+|||.+++...
T Consensus 98 ~~~d~~~~~~~~~~~~fD~i~~~~p~~~-----~~~~~~~~l~~~~~~~~L~pgG~l~~~~~ 154 (189)
T 3p9n_A 98 RRGAVAAVVAAGTTSPVDLVLADPPYNV-----DSADVDAILAALGTNGWTREGTVAVVERA 154 (189)
T ss_dssp EESCHHHHHHHCCSSCCSEEEECCCTTS-----CHHHHHHHHHHHHHSSSCCTTCEEEEEEE
T ss_pred EEccHHHHHhhccCCCccEEEECCCCCc-----chhhHHHHHHHHHhcCccCCCeEEEEEec
Confidence 12222211112 479999998766552 11235678889988 9999999999754
No 422
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=97.09 E-value=0.00097 Score=65.84 Aligned_cols=112 Identities=12% Similarity=0.221 Sum_probs=72.0
Q ss_pred HhccCCCCCeeeEEeccccccchhhhccCC---CeEEEEeccCCCC-chhHHHHhh----cccc----cccccCCCCCCC
Q 039518 459 QLMNVNETEIRNAMDMNAYCGGFAVALNSL---PVWVMNIVPISMK-NTLSAIYNR----GILG----AFHDWCEPFSTY 526 (617)
Q Consensus 459 ~~~~~~~~~~Rn~mDm~~~~g~faa~l~~~---~v~vmnv~p~~~~-~~l~~~~~R----Glig----~~~~~~~~f~ty 526 (617)
..+++..+ .+|||+|||.|.++.+|... ..-|..+ |-. ..+..+-++ |+-. +..|..+.++.
T Consensus 87 ~~~~~~~~--~~vldiG~G~G~~~~~l~~~~~~~~~v~~~---D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~- 160 (255)
T 3mb5_A 87 AYAGISPG--DFIVEAGVGSGALTLFLANIVGPEGRVVSY---EIREDFAKLAWENIKWAGFDDRVTIKLKDIYEGIEE- 160 (255)
T ss_dssp HHTTCCTT--CEEEEECCTTSHHHHHHHHHHCTTSEEEEE---CSCHHHHHHHHHHHHHHTCTTTEEEECSCGGGCCCC-
T ss_pred HhhCCCCC--CEEEEecCCchHHHHHHHHHhCCCeEEEEE---ecCHHHHHHHHHHHHHcCCCCceEEEECchhhccCC-
Confidence 33445555 57999999999999988654 3333333 333 455555444 5432 34566666553
Q ss_pred CCccchhhccccccccccCCCCCChhhHHhhhhhcccCCceEEEec-ChHHHHHHHhhhhcCC
Q 039518 527 PRTYDLLHANHLFSHYKNRGEVCSLEDIMLEMDLIIRPQGFIIIRD-EKSLITRIRDLAPKFL 588 (617)
Q Consensus 527 prtyDl~H~~~~~s~~~~~~~~c~~~~~l~e~dRilRP~G~~i~~d-~~~~~~~~~~~~~~~~ 588 (617)
.+||+|-++ --....+|-++-|+|+|||.+++.. ..+...++.+.++...
T Consensus 161 -~~~D~v~~~-----------~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~l~~~g 211 (255)
T 3mb5_A 161 -ENVDHVILD-----------LPQPERVVEHAAKALKPGGFFVAYTPCSNQVMRLHEKLREFK 211 (255)
T ss_dssp -CSEEEEEEC-----------SSCGGGGHHHHHHHEEEEEEEEEEESSHHHHHHHHHHHHHTG
T ss_pred -CCcCEEEEC-----------CCCHHHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHcC
Confidence 789998742 1233568999999999999999874 3455556666555544
No 423
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=97.09 E-value=0.0019 Score=61.89 Aligned_cols=132 Identities=11% Similarity=0.121 Sum_probs=68.8
Q ss_pred eeEEeccccccchhhhccCCC--eEEEEeccCCCCchhHHHHhhcccccccccCCCCCC-------CC----Cccchhhc
Q 039518 469 RNAMDMNAYCGGFAVALNSLP--VWVMNIVPISMKNTLSAIYNRGILGAFHDWCEPFST-------YP----RTYDLLHA 535 (617)
Q Consensus 469 Rn~mDm~~~~g~faa~l~~~~--v~vmnv~p~~~~~~l~~~~~RGlig~~~~~~~~f~t-------yp----rtyDl~H~ 535 (617)
.+|||+|||.|+|+.+|.++. |+-+-+.|.... .|+--+-.|..+. ++ ++ .+||+|-+
T Consensus 27 ~~VLDlG~G~G~~s~~la~~~~~V~gvD~~~~~~~--------~~v~~~~~D~~~~-~~~~~~~~~~~~~~~~~~D~Vls 97 (191)
T 3dou_A 27 DAVIEIGSSPGGWTQVLNSLARKIISIDLQEMEEI--------AGVRFIRCDIFKE-TIFDDIDRALREEGIEKVDDVVS 97 (191)
T ss_dssp CEEEEESCTTCHHHHHHTTTCSEEEEEESSCCCCC--------TTCEEEECCTTSS-SHHHHHHHHHHHHTCSSEEEEEE
T ss_pred CEEEEEeecCCHHHHHHHHcCCcEEEEeccccccC--------CCeEEEEccccCH-HHHHHHHHHhhcccCCcceEEec
Confidence 689999999999999998764 444444443211 1222222333321 10 11 37899887
Q ss_pred ccccccc-----ccCCCCCChhhHHhhhhhcccCCceEEEec--ChHHHHHHHhhhhcCCce-EEEe-eccccCCCceeE
Q 039518 536 NHLFSHY-----KNRGEVCSLEDIMLEMDLIIRPQGFIIIRD--EKSLITRIRDLAPKFLWD-VELH-SLENREKKMESV 606 (617)
Q Consensus 536 ~~~~s~~-----~~~~~~c~~~~~l~e~dRilRP~G~~i~~d--~~~~~~~~~~~~~~~~W~-~~~~-~~e~~~~~~~~~ 606 (617)
+.-...- +.....-..+.+|-++-|+|||||.+++.- ..+ ...+...++.. ++ +.+. ..-+-+...|..
T Consensus 98 d~~~~~~g~~~~d~~~~~~l~~~~l~~a~~~LkpGG~lv~k~~~~~~-~~~~~~~l~~~-F~~v~~~kP~asR~~s~E~y 175 (191)
T 3dou_A 98 DAMAKVSGIPSRDHAVSYQIGQRVMEIAVRYLRNGGNVLLKQFQGDM-TNDFIAIWRKN-FSSYKISKPPASRGSSSEIY 175 (191)
T ss_dssp CCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECSTH-HHHHHHHHGGG-EEEEEEECC------CCEEE
T ss_pred CCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEcCCCC-HHHHHHHHHHh-cCEEEEECCCCccCCCceEE
Confidence 6533200 000000112467788899999999999852 222 23344444432 33 3332 222334456888
Q ss_pred EEEEe
Q 039518 607 LICRK 611 (617)
Q Consensus 607 l~~~k 611 (617)
+||++
T Consensus 176 ~v~~~ 180 (191)
T 3dou_A 176 IMFFG 180 (191)
T ss_dssp EEEEE
T ss_pred EEEee
Confidence 88875
No 424
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=97.09 E-value=0.00077 Score=67.09 Aligned_cols=130 Identities=11% Similarity=0.097 Sum_probs=75.4
Q ss_pred eeeEEeccccccchhhhccC-----CCeEEEEeccCCCCchhHHHHhhcccc---cc-cccCCCCCCC-----CCccchh
Q 039518 468 IRNAMDMNAYCGGFAVALNS-----LPVWVMNIVPISMKNTLSAIYNRGILG---AF-HDWCEPFSTY-----PRTYDLL 533 (617)
Q Consensus 468 ~Rn~mDm~~~~g~faa~l~~-----~~v~vmnv~p~~~~~~l~~~~~RGlig---~~-~~~~~~f~ty-----prtyDl~ 533 (617)
-++|||+|||.|.++.+|.. -.|..+-+-|.-....-+.+-..|+-. ++ .|-.+.++.. +.+||+|
T Consensus 61 ~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~~~~~~~~~~fD~V 140 (242)
T 3r3h_A 61 AKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAKQEHKIKLRLGPALDTLHSLLNEGGEHQFDFI 140 (242)
T ss_dssp CSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTTCTTTEEEEESCHHHHHHHHHHHHCSSCEEEE
T ss_pred cCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHhhccCCCCEeEE
Confidence 36899999999998887754 235555544443332223333445421 21 1222222322 4789999
Q ss_pred hccccccccccCCCCCChhhHHhhhhhcccCCceEEEecCh------------HHHHHHHh----hhhcCCceEEEeecc
Q 039518 534 HANHLFSHYKNRGEVCSLEDIMLEMDLIIRPQGFIIIRDEK------------SLITRIRD----LAPKFLWDVELHSLE 597 (617)
Q Consensus 534 H~~~~~s~~~~~~~~c~~~~~l~e~dRilRP~G~~i~~d~~------------~~~~~~~~----~~~~~~W~~~~~~~e 597 (617)
.++.-... ...++-++-|+|||||.+++.|-. .....+++ +...=++++.+...
T Consensus 141 ~~d~~~~~---------~~~~l~~~~~~LkpGG~lv~d~~~~~g~v~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lp~- 210 (242)
T 3r3h_A 141 FIDADKTN---------YLNYYELALKLVTPKGLIAIDNIFWDGKVIDPNDTSGQTREIKKLNQVIKNDSRVFVSLLAI- 210 (242)
T ss_dssp EEESCGGG---------HHHHHHHHHHHEEEEEEEEEECSSSSSCSSCTTCCCHHHHHHHHHHHHHHTCCSEEEEEESS-
T ss_pred EEcCChHH---------hHHHHHHHHHhcCCCeEEEEECCccCCcccCccccChHHHHHHHHHHHHhhCCCEEEEEEEc-
Confidence 86654332 235777889999999999995321 12223333 33444566665532
Q ss_pred ccCCCceeEEEEEec
Q 039518 598 NREKKMESVLICRKK 612 (617)
Q Consensus 598 ~~~~~~~~~l~~~k~ 612 (617)
.+.++|++|+
T Consensus 211 -----~dG~~~~~k~ 220 (242)
T 3r3h_A 211 -----ADGMFLVQPI 220 (242)
T ss_dssp -----SSCEEEEEEC
T ss_pred -----cCceEEEEEc
Confidence 3678888874
No 425
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=97.08 E-value=0.00072 Score=70.97 Aligned_cols=95 Identities=9% Similarity=0.075 Sum_probs=60.2
Q ss_pred eeEEeccccccchhhhccCCCe-EEEEeccCCCCchhHHHHh----hcc---cccccccCCCCCCCCCccchhhcccccc
Q 039518 469 RNAMDMNAYCGGFAVALNSLPV-WVMNIVPISMKNTLSAIYN----RGI---LGAFHDWCEPFSTYPRTYDLLHANHLFS 540 (617)
Q Consensus 469 Rn~mDm~~~~g~faa~l~~~~v-~vmnv~p~~~~~~l~~~~~----RGl---ig~~~~~~~~f~typrtyDl~H~~~~~s 540 (617)
.+|||+|||.|.++..+...+. -|.-|-+. ..+..+-+ .|+ |-+++.=-+.++ .|..||+|-+..++.
T Consensus 52 ~~VLDiGcGtG~ls~~la~~g~~~V~~vD~s---~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~-~~~~~D~Ivs~~~~~ 127 (348)
T 2y1w_A 52 KIVLDVGCGSGILSFFAAQAGARKIYAVEAS---TMAQHAEVLVKSNNLTDRIVVIPGKVEEVS-LPEQVDIIISEPMGY 127 (348)
T ss_dssp CEEEEETCTTSHHHHHHHHTTCSEEEEEECS---THHHHHHHHHHHTTCTTTEEEEESCTTTCC-CSSCEEEEEECCCBT
T ss_pred CEEEEcCCCccHHHHHHHhCCCCEEEEECCH---HHHHHHHHHHHHcCCCCcEEEEEcchhhCC-CCCceeEEEEeCchh
Confidence 5899999999999888866543 34444332 13333322 354 222222112222 357899999888776
Q ss_pred ccccCCCCCChhhHHhhhhhcccCCceEEEe
Q 039518 541 HYKNRGEVCSLEDIMLEMDLIIRPQGFIIIR 571 (617)
Q Consensus 541 ~~~~~~~~c~~~~~l~e~dRilRP~G~~i~~ 571 (617)
++ . .-.+...+.++-|+|+|||.+++.
T Consensus 128 ~~---~-~~~~~~~l~~~~~~LkpgG~li~~ 154 (348)
T 2y1w_A 128 ML---F-NERMLESYLHAKKYLKPSGNMFPT 154 (348)
T ss_dssp TB---T-TTSHHHHHHHGGGGEEEEEEEESC
T ss_pred cC---C-hHHHHHHHHHHHhhcCCCeEEEEe
Confidence 54 1 223557788999999999999864
No 426
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=97.07 E-value=0.001 Score=65.09 Aligned_cols=117 Identities=5% Similarity=0.044 Sum_probs=73.5
Q ss_pred HHHHHhccCCCCCeeeEEeccccccchhhhccCCCeEEEEeccCCCC-chhHHHHhh----cc---c-ccccccCCCC-C
Q 039518 455 RHYWQLMNVNETEIRNAMDMNAYCGGFAVALNSLPVWVMNIVPISMK-NTLSAIYNR----GI---L-GAFHDWCEPF-S 524 (617)
Q Consensus 455 ~~y~~~~~~~~~~~Rn~mDm~~~~g~faa~l~~~~v~vmnv~p~~~~-~~l~~~~~R----Gl---i-g~~~~~~~~f-~ 524 (617)
.+-...+++..+ .+|||+|||.|.++.+|.+... +|+-.|-. ..+..+-++ |+ + -+..|..+.+ +
T Consensus 81 ~~~~~~~~~~~~--~~vldiG~G~G~~~~~l~~~~~---~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~ 155 (248)
T 2yvl_A 81 FYIALKLNLNKE--KRVLEFGTGSGALLAVLSEVAG---EVWTFEAVEEFYKTAQKNLKKFNLGKNVKFFNVDFKDAEVP 155 (248)
T ss_dssp HHHHHHTTCCTT--CEEEEECCTTSHHHHHHHHHSS---EEEEECSCHHHHHHHHHHHHHTTCCTTEEEECSCTTTSCCC
T ss_pred HHHHHhcCCCCC--CEEEEeCCCccHHHHHHHHhCC---EEEEEecCHHHHHHHHHHHHHcCCCCcEEEEEcChhhcccC
Confidence 333444445555 4899999999999988876532 34444544 555555554 33 1 1223444443 2
Q ss_pred CCCCccchhhccccccccccCCCCCChhhHHhhhhhcccCCceEEEecC-hHHHHHHHhhhhcCCce
Q 039518 525 TYPRTYDLLHANHLFSHYKNRGEVCSLEDIMLEMDLIIRPQGFIIIRDE-KSLITRIRDLAPKFLWD 590 (617)
Q Consensus 525 typrtyDl~H~~~~~s~~~~~~~~c~~~~~l~e~dRilRP~G~~i~~d~-~~~~~~~~~~~~~~~W~ 590 (617)
+..||+|-++ --....++-++-|+|+|||.+++... .+.+.++.+.++.. |.
T Consensus 156 --~~~~D~v~~~-----------~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~l~~~-f~ 208 (248)
T 2yvl_A 156 --EGIFHAAFVD-----------VREPWHYLEKVHKSLMEGAPVGFLLPTANQVIKLLESIENY-FG 208 (248)
T ss_dssp --TTCBSEEEEC-----------SSCGGGGHHHHHHHBCTTCEEEEEESSHHHHHHHHHHSTTT-EE
T ss_pred --CCcccEEEEC-----------CcCHHHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhh-CC
Confidence 3689998732 11345788999999999999999765 45566666665554 44
No 427
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=97.06 E-value=0.00047 Score=70.02 Aligned_cols=133 Identities=14% Similarity=0.107 Sum_probs=69.9
Q ss_pred eeEEeccccccchhhhccCC-CeEEEEeccCCC--C-chhHH-HHhhccccc--ccccCCCCCCCCCccchhhccccccc
Q 039518 469 RNAMDMNAYCGGFAVALNSL-PVWVMNIVPISM--K-NTLSA-IYNRGILGA--FHDWCEPFSTYPRTYDLLHANHLFSH 541 (617)
Q Consensus 469 Rn~mDm~~~~g~faa~l~~~-~v~vmnv~p~~~--~-~~l~~-~~~RGlig~--~~~~~~~f~typrtyDl~H~~~~~s~ 541 (617)
..|||+|||.|+|+..|... .|.-+-+.|... + +.+.. .+..++.-+ -.|-. .++ +.+||+|-++..+.
T Consensus 76 ~~VLDlGcGtG~~s~~la~~~~V~gvD~s~m~~~a~~~~~~~~~~~~~v~~~~~~~D~~-~l~--~~~fD~V~sd~~~~- 151 (265)
T 2oxt_A 76 GRVVDLGCGRGGWSYYAASRPHVMDVRAYTLGVGGHEVPRITESYGWNIVKFKSRVDIH-TLP--VERTDVIMCDVGES- 151 (265)
T ss_dssp EEEEEESCTTSHHHHHHHTSTTEEEEEEECCCCSSCCCCCCCCBTTGGGEEEECSCCTT-TSC--CCCCSEEEECCCCC-
T ss_pred CEEEEeCcCCCHHHHHHHHcCcEEEEECchhhhhhhhhhhhhhccCCCeEEEecccCHh-HCC--CCCCcEEEEeCccc-
Confidence 68999999999998887664 566666666311 0 10000 000011111 12222 133 58999999775422
Q ss_pred cccCCCCCChh-----hHHhhhhhcccCCc--eEEEe----cChHHHHHHHhhhhcCCceEEEeeccccCCCceeEEEEE
Q 039518 542 YKNRGEVCSLE-----DIMLEMDLIIRPQG--FIIIR----DEKSLITRIRDLAPKFLWDVELHSLENREKKMESVLICR 610 (617)
Q Consensus 542 ~~~~~~~c~~~-----~~l~e~dRilRP~G--~~i~~----d~~~~~~~~~~~~~~~~W~~~~~~~e~~~~~~~~~l~~~ 610 (617)
...-.++ .+|-++.|+|+||| .+++. +..++++.++.+.+.+. .+.+...-.-....|..+|+.
T Consensus 152 ----~~~~~~d~~~~l~~L~~~~r~LkpGG~~~fv~kv~~~~~~~~~~~l~~l~~~f~-~v~~~k~~sR~~s~E~y~v~~ 226 (265)
T 2oxt_A 152 ----SPKWSVESERTIKILELLEKWKVKNPSADFVVKVLCPYSVEVMERLSVMQRKWG-GGLVRNPYSRNSTHEMYFTSR 226 (265)
T ss_dssp ----CSCHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEESCTTSHHHHHHHHHHHHHHC-CEEECCTTSCTTCCCEEEESS
T ss_pred ----CCccchhHHHHHHHHHHHHHHhccCCCeEEEEEeCCCCChhHHHHHHHHHHHcC-CEEEEEecccCCCccEEEEec
Confidence 1110111 26788999999999 99986 34433344444433222 233333222233456666664
No 428
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=97.04 E-value=0.00046 Score=67.10 Aligned_cols=119 Identities=9% Similarity=0.113 Sum_probs=69.7
Q ss_pred eeEEeccccccchhhhccCC--CeEEEEeccCCCC-chhHHHHh----hcc--ccc-ccccCCCCCC-C-CCccchhhcc
Q 039518 469 RNAMDMNAYCGGFAVALNSL--PVWVMNIVPISMK-NTLSAIYN----RGI--LGA-FHDWCEPFST-Y-PRTYDLLHAN 536 (617)
Q Consensus 469 Rn~mDm~~~~g~faa~l~~~--~v~vmnv~p~~~~-~~l~~~~~----RGl--ig~-~~~~~~~f~t-y-prtyDl~H~~ 536 (617)
..|||+|||.|.++.+|... .. +|+-.|-. ..+..+-+ .|+ +-+ ..|..+ ++. + +.+||.|++.
T Consensus 40 ~~vLDiGcG~G~~~~~la~~~p~~---~v~giD~s~~~l~~a~~~~~~~~~~nv~~~~~d~~~-l~~~~~~~~~d~v~~~ 115 (213)
T 2fca_A 40 PIHIEVGTGKGQFISGMAKQNPDI---NYIGIELFKSVIVTAVQKVKDSEAQNVKLLNIDADT-LTDVFEPGEVKRVYLN 115 (213)
T ss_dssp CEEEEECCTTSHHHHHHHHHCTTS---EEEEECSCHHHHHHHHHHHHHSCCSSEEEECCCGGG-HHHHCCTTSCCEEEEE
T ss_pred ceEEEEecCCCHHHHHHHHHCCCC---CEEEEEechHHHHHHHHHHHHcCCCCEEEEeCCHHH-HHhhcCcCCcCEEEEE
Confidence 46999999999999988643 22 23333444 44444443 354 122 223322 221 2 3789988743
Q ss_pred ccccccc---cCCCCCChhhHHhhhhhcccCCceEEEe-cChHHHHHHHhhhhcCCceEE
Q 039518 537 HLFSHYK---NRGEVCSLEDIMLEMDLIIRPQGFIIIR-DEKSLITRIRDLAPKFLWDVE 592 (617)
Q Consensus 537 ~~~s~~~---~~~~~c~~~~~l~e~dRilRP~G~~i~~-d~~~~~~~~~~~~~~~~W~~~ 592 (617)
..- .|. ....+-....+|-|+-|+|+|||.+++. |..+..+.+.+......|+..
T Consensus 116 ~~~-p~~~~~~~~~rl~~~~~l~~~~~~LkpgG~l~~~td~~~~~~~~~~~~~~~g~~~~ 174 (213)
T 2fca_A 116 FSD-PWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFKTDNRGLFEYSLKSFSEYGLLLT 174 (213)
T ss_dssp SCC-CCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEEESCHHHHHHHHHHHHHHTCEEE
T ss_pred CCC-CCcCccccccccCcHHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHCCCccc
Confidence 211 110 0122323467899999999999999987 566666666666555556543
No 429
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=97.03 E-value=0.00022 Score=70.02 Aligned_cols=115 Identities=10% Similarity=0.060 Sum_probs=64.1
Q ss_pred eeeEEeccccccchhhhccCC--CeEEEEeccCCCC-chhHHH----Hhhcccc--c-ccccCCCCCC-C-CCccchhhc
Q 039518 468 IRNAMDMNAYCGGFAVALNSL--PVWVMNIVPISMK-NTLSAI----YNRGILG--A-FHDWCEPFST-Y-PRTYDLLHA 535 (617)
Q Consensus 468 ~Rn~mDm~~~~g~faa~l~~~--~v~vmnv~p~~~~-~~l~~~----~~RGlig--~-~~~~~~~f~t-y-prtyDl~H~ 535 (617)
-..|||+|||.|.++.+|... ..-|.-| |-. ..+..+ -+.|+-. + -+|-.+.++. + +.+||+|++
T Consensus 35 ~~~vLDiGcG~G~~~~~lA~~~p~~~v~gi---D~s~~~l~~a~~~~~~~~l~nv~~~~~Da~~~l~~~~~~~~~d~v~~ 111 (218)
T 3dxy_A 35 APVTLEIGFGMGASLVAMAKDRPEQDFLGI---EVHSPGVGACLASAHEEGLSNLRVMCHDAVEVLHKMIPDNSLRMVQL 111 (218)
T ss_dssp CCEEEEESCTTCHHHHHHHHHCTTSEEEEE---CSCHHHHHHHHHHHHHTTCSSEEEECSCHHHHHHHHSCTTCEEEEEE
T ss_pred CCeEEEEeeeChHHHHHHHHHCCCCeEEEE---EecHHHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHcCCCChheEEE
Confidence 357999999999999888532 3323333 333 444333 3345422 1 1222222111 2 489999985
Q ss_pred ccccccccc--CCCCCChhhHHhhhhhcccCCceEEEe-cChHHHHHHHhhhh
Q 039518 536 NHLFSHYKN--RGEVCSLEDIMLEMDLIIRPQGFIIIR-DEKSLITRIRDLAP 585 (617)
Q Consensus 536 ~~~~s~~~~--~~~~c~~~~~l~e~dRilRP~G~~i~~-d~~~~~~~~~~~~~ 585 (617)
....-..+. ...|-.-..++-|+-|+|+|||.+++. |.....+.+.+++.
T Consensus 112 ~~~~p~~~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i~td~~~~~~~~~~~~~ 164 (218)
T 3dxy_A 112 FFPDPWHKARHNKRRIVQVPFAELVKSKLQLGGVFHMATDWEPYAEHMLEVMS 164 (218)
T ss_dssp ESCCCCCSGGGGGGSSCSHHHHHHHHHHEEEEEEEEEEESCHHHHHHHHHHHH
T ss_pred eCCCCccchhhhhhhhhhHHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHH
Confidence 422111100 011112235899999999999999997 55555566655543
No 430
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=97.02 E-value=0.00027 Score=67.69 Aligned_cols=100 Identities=9% Similarity=0.101 Sum_probs=62.0
Q ss_pred HHHhccCCCCCeeeEEeccccccchhhhccCCCeEEEEeccCCCC-chhHHHHhh----ccc--c-cccccCCCCCCCCC
Q 039518 457 YWQLMNVNETEIRNAMDMNAYCGGFAVALNSLPVWVMNIVPISMK-NTLSAIYNR----GIL--G-AFHDWCEPFSTYPR 528 (617)
Q Consensus 457 y~~~~~~~~~~~Rn~mDm~~~~g~faa~l~~~~v~vmnv~p~~~~-~~l~~~~~R----Gli--g-~~~~~~~~f~typr 528 (617)
....+.+..+ .+|||+|||.|.+++.|.....-| .-.|-. ..+..+-++ |+- - ...|..+.... ..
T Consensus 69 ~~~~l~~~~~--~~vLdiG~G~G~~~~~la~~~~~v---~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~-~~ 142 (210)
T 3lbf_A 69 MTELLELTPQ--SRVLEIGTGSGYQTAILAHLVQHV---CSVERIKGLQWQARRRLKNLDLHNVSTRHGDGWQGWQA-RA 142 (210)
T ss_dssp HHHHTTCCTT--CEEEEECCTTSHHHHHHHHHSSEE---EEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGG-GC
T ss_pred HHHhcCCCCC--CEEEEEcCCCCHHHHHHHHhCCEE---EEEecCHHHHHHHHHHHHHcCCCceEEEECCcccCCcc-CC
Confidence 3444445544 589999999999999887653322 223333 444444443 432 1 22233332221 37
Q ss_pred ccchhhccccccccccCCCCCChhhHHhhhhhcccCCceEEEecCh
Q 039518 529 TYDLLHANHLFSHYKNRGEVCSLEDIMLEMDLIIRPQGFIIIRDEK 574 (617)
Q Consensus 529 tyDl~H~~~~~s~~~~~~~~c~~~~~l~e~dRilRP~G~~i~~d~~ 574 (617)
+||+|.++..+..+ . =++-|+|+|||.+++.-..
T Consensus 143 ~~D~i~~~~~~~~~---~---------~~~~~~L~pgG~lv~~~~~ 176 (210)
T 3lbf_A 143 PFDAIIVTAAPPEI---P---------TALMTQLDEGGILVLPVGE 176 (210)
T ss_dssp CEEEEEESSBCSSC---C---------THHHHTEEEEEEEEEEECS
T ss_pred CccEEEEccchhhh---h---------HHHHHhcccCcEEEEEEcC
Confidence 89999988877644 1 2678999999999997443
No 431
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=97.01 E-value=0.00087 Score=65.99 Aligned_cols=115 Identities=11% Similarity=0.183 Sum_probs=69.3
Q ss_pred HHhccCCCCCeeeEEeccccccchhhhccCC---CeEEEEeccCCCC-chhHHHHhh-----cc--c-ccccccCCC-CC
Q 039518 458 WQLMNVNETEIRNAMDMNAYCGGFAVALNSL---PVWVMNIVPISMK-NTLSAIYNR-----GI--L-GAFHDWCEP-FS 524 (617)
Q Consensus 458 ~~~~~~~~~~~Rn~mDm~~~~g~faa~l~~~---~v~vmnv~p~~~~-~~l~~~~~R-----Gl--i-g~~~~~~~~-f~ 524 (617)
...+.+..+ .+|||+|||.|.++.+|... ..-|.. .|.. ..+..+-++ |. + -...|..+. ++
T Consensus 89 ~~~~~~~~~--~~vLdiG~G~G~~~~~l~~~~~~~~~v~~---~D~~~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~~~~ 163 (258)
T 2pwy_A 89 VTLLDLAPG--MRVLEAGTGSGGLTLFLARAVGEKGLVES---YEARPHHLAQAERNVRAFWQVENVRFHLGKLEEAELE 163 (258)
T ss_dssp HHHTTCCTT--CEEEEECCTTSHHHHHHHHHHCTTSEEEE---EESCHHHHHHHHHHHHHHCCCCCEEEEESCGGGCCCC
T ss_pred HHHcCCCCC--CEEEEECCCcCHHHHHHHHHhCCCCEEEE---EeCCHHHHHHHHHHHHHhcCCCCEEEEECchhhcCCC
Confidence 343445555 48999999999999888654 222222 2333 445454444 52 1 122344443 33
Q ss_pred CCCCccchhhccccccccccCCCCCChhhHHhhhhhcccCCceEEEecCh-HHHHHHHhhhhcCCce
Q 039518 525 TYPRTYDLLHANHLFSHYKNRGEVCSLEDIMLEMDLIIRPQGFIIIRDEK-SLITRIRDLAPKFLWD 590 (617)
Q Consensus 525 typrtyDl~H~~~~~s~~~~~~~~c~~~~~l~e~dRilRP~G~~i~~d~~-~~~~~~~~~~~~~~W~ 590 (617)
+.+||+|-++ --....+|-++-|+|+|||.+++.... +.+.++.+.++...|.
T Consensus 164 --~~~~D~v~~~-----------~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~l~~~gf~ 217 (258)
T 2pwy_A 164 --EAAYDGVALD-----------LMEPWKVLEKAALALKPDRFLVAYLPNITQVLELVRAAEAHPFR 217 (258)
T ss_dssp --TTCEEEEEEE-----------SSCGGGGHHHHHHHEEEEEEEEEEESCHHHHHHHHHHHTTTTEE
T ss_pred --CCCcCEEEEC-----------CcCHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCc
Confidence 2689998742 112347899999999999999997654 3455555555555554
No 432
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=97.01 E-value=0.00051 Score=67.29 Aligned_cols=131 Identities=9% Similarity=0.131 Sum_probs=67.6
Q ss_pred eeEEeccccccchhhhccCC----CeEEEEeccCCCCchhHHHHhh-----cccccccccCCCC--CCCCCccchhhccc
Q 039518 469 RNAMDMNAYCGGFAVALNSL----PVWVMNIVPISMKNTLSAIYNR-----GILGAFHDWCEPF--STYPRTYDLLHANH 537 (617)
Q Consensus 469 Rn~mDm~~~~g~faa~l~~~----~v~vmnv~p~~~~~~l~~~~~R-----Glig~~~~~~~~f--~typrtyDl~H~~~ 537 (617)
.+|||+|||.|.++..|.+. .|..+-+.| ..+..+-++ .+.-+..|..++. ..++.+||+|-.+
T Consensus 76 ~~VLDlGcG~G~~~~~la~~~~~~~v~gvD~s~----~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~D~v~~~- 150 (230)
T 1fbn_A 76 SKILYLGASAGTTPSHVADIADKGIVYAIEYAP----RIMRELLDACAERENIIPILGDANKPQEYANIVEKVDVIYED- 150 (230)
T ss_dssp CEEEEESCCSSHHHHHHHHHTTTSEEEEEESCH----HHHHHHHHHTTTCTTEEEEECCTTCGGGGTTTSCCEEEEEEC-
T ss_pred CEEEEEcccCCHHHHHHHHHcCCcEEEEEECCH----HHHHHHHHHhhcCCCeEEEECCCCCcccccccCccEEEEEEe-
Confidence 47999999999999888644 233333322 223222222 1222223333211 1123689997511
Q ss_pred cccccccCCCCCChhhHHhhhhhcccCCceEEEe----cCh------H-HHHHHHhhhhcCCceEEEeeccccCCCceeE
Q 039518 538 LFSHYKNRGEVCSLEDIMLEMDLIIRPQGFIIIR----DEK------S-LITRIRDLAPKFLWDVELHSLENREKKMESV 606 (617)
Q Consensus 538 ~~s~~~~~~~~c~~~~~l~e~dRilRP~G~~i~~----d~~------~-~~~~~~~~~~~~~W~~~~~~~e~~~~~~~~~ 606 (617)
+. ..=....+|-++-|+|+|||.+++. ... . .-+.++ ++....++......-+.-....-+
T Consensus 151 -~~------~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~l~-~l~~~Gf~~~~~~~~~~~~~~~~~ 222 (230)
T 1fbn_A 151 -VA------QPNQAEILIKNAKWFLKKGGYGMIAIKARSIDVTKDPKEIFKEQKE-ILEAGGFKIVDEVDIEPFEKDHVM 222 (230)
T ss_dssp -CC------STTHHHHHHHHHHHHEEEEEEEEEEEEGGGTCSSSCHHHHHHHHHH-HHHHHTEEEEEEEECTTTSTTEEE
T ss_pred -cC------ChhHHHHHHHHHHHhCCCCcEEEEEEecCCCCCCCCHHHhhHHHHH-HHHHCCCEEEEEEccCCCccceEE
Confidence 11 1111256799999999999999993 111 1 124555 444444554333211111223456
Q ss_pred EEEEec
Q 039518 607 LICRKK 612 (617)
Q Consensus 607 l~~~k~ 612 (617)
++++|+
T Consensus 223 v~~~k~ 228 (230)
T 1fbn_A 223 FVGIWE 228 (230)
T ss_dssp EEEEEC
T ss_pred EEEEeC
Confidence 777774
No 433
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=96.99 E-value=0.00053 Score=71.86 Aligned_cols=94 Identities=10% Similarity=0.086 Sum_probs=56.9
Q ss_pred eeEEeccccccchhhhccCCCe-EEEEeccCCCCchhHHH----Hhhcc---cccccccCCCCCCCC-Cccchhhccccc
Q 039518 469 RNAMDMNAYCGGFAVALNSLPV-WVMNIVPISMKNTLSAI----YNRGI---LGAFHDWCEPFSTYP-RTYDLLHANHLF 539 (617)
Q Consensus 469 Rn~mDm~~~~g~faa~l~~~~v-~vmnv~p~~~~~~l~~~----~~RGl---ig~~~~~~~~f~typ-rtyDl~H~~~~~ 539 (617)
.+|||+|||.|.++..+...+. -|..|=... .+..+ -+.|+ |-+++.=.+.++ +| ..||+|-+..+.
T Consensus 66 ~~VLDiGcGtG~ls~~la~~g~~~v~gvD~s~---~~~~a~~~~~~~~~~~~i~~~~~d~~~~~-~~~~~~D~Ivs~~~~ 141 (340)
T 2fyt_A 66 KVVLDVGCGTGILSMFAAKAGAKKVLGVDQSE---ILYQAMDIIRLNKLEDTITLIKGKIEEVH-LPVEKVDVIISEWMG 141 (340)
T ss_dssp CEEEEETCTTSHHHHHHHHTTCSEEEEEESST---HHHHHHHHHHHTTCTTTEEEEESCTTTSC-CSCSCEEEEEECCCB
T ss_pred CEEEEeeccCcHHHHHHHHcCCCEEEEEChHH---HHHHHHHHHHHcCCCCcEEEEEeeHHHhc-CCCCcEEEEEEcCch
Confidence 4799999999999888866543 233333321 23332 23344 222322222232 45 799999987642
Q ss_pred cccccCCCCCChhhHHhhhhhcccCCceEE
Q 039518 540 SHYKNRGEVCSLEDIMLEMDLIIRPQGFII 569 (617)
Q Consensus 540 s~~~~~~~~c~~~~~l~e~dRilRP~G~~i 569 (617)
... ...-.+..+|-++.|+|+|||.+|
T Consensus 142 ~~l---~~~~~~~~~l~~~~~~LkpgG~li 168 (340)
T 2fyt_A 142 YFL---LFESMLDSVLYAKNKYLAKGGSVY 168 (340)
T ss_dssp TTB---TTTCHHHHHHHHHHHHEEEEEEEE
T ss_pred hhc---cCHHHHHHHHHHHHhhcCCCcEEE
Confidence 211 222235578999999999999998
No 434
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=96.98 E-value=6.5e-05 Score=70.08 Aligned_cols=97 Identities=12% Similarity=0.149 Sum_probs=59.0
Q ss_pred eeEEeccccccchhhhccCCCeEEEEeccCCCC-chhHHHHh----hccc----ccccccCCCCCCCCCccchhhccccc
Q 039518 469 RNAMDMNAYCGGFAVALNSLPVWVMNIVPISMK-NTLSAIYN----RGIL----GAFHDWCEPFSTYPRTYDLLHANHLF 539 (617)
Q Consensus 469 Rn~mDm~~~~g~faa~l~~~~v~vmnv~p~~~~-~~l~~~~~----RGli----g~~~~~~~~f~typrtyDl~H~~~~~ 539 (617)
.+|||+|||.|.++.+|...+.. +|+-.|-. ..+..+-+ .|+- =+..|+.+.++..+..||+|.++..|
T Consensus 33 ~~vLDlGcG~G~~~~~l~~~~~~--~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~fD~i~~~~~~ 110 (177)
T 2esr_A 33 GRVLDLFAGSGGLAIEAVSRGMS--AAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAERAIDCLTGRFDLVFLDPPY 110 (177)
T ss_dssp CEEEEETCTTCHHHHHHHHTTCC--EEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHHHHHHBCSCEEEEEECCSS
T ss_pred CeEEEeCCCCCHHHHHHHHcCCC--EEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcHHHhHHhhcCCCCEEEECCCC
Confidence 48999999999999988766531 23333443 44444332 2332 11233433333345679999987665
Q ss_pred cccccCCCCCChhhHHhhhh--hcccCCceEEEecCh
Q 039518 540 SHYKNRGEVCSLEDIMLEMD--LIIRPQGFIIIRDEK 574 (617)
Q Consensus 540 s~~~~~~~~c~~~~~l~e~d--RilRP~G~~i~~d~~ 574 (617)
.. .....++-++- |+|+|||.+++....
T Consensus 111 ~~-------~~~~~~~~~l~~~~~L~~gG~l~~~~~~ 140 (177)
T 2esr_A 111 AK-------ETIVATIEALAAKNLLSEQVMVVCETDK 140 (177)
T ss_dssp HH-------HHHHHHHHHHHHTTCEEEEEEEEEEEET
T ss_pred Cc-------chHHHHHHHHHhCCCcCCCcEEEEEECC
Confidence 31 12345555565 999999999997443
No 435
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=96.97 E-value=0.00037 Score=67.00 Aligned_cols=91 Identities=12% Similarity=0.072 Sum_probs=55.6
Q ss_pred eeEEeccccccchhhhccCC---CeEEEEeccCCCC-chhHHHH----hhcccc---cc-cccCCCCCCCCCccchhhcc
Q 039518 469 RNAMDMNAYCGGFAVALNSL---PVWVMNIVPISMK-NTLSAIY----NRGILG---AF-HDWCEPFSTYPRTYDLLHAN 536 (617)
Q Consensus 469 Rn~mDm~~~~g~faa~l~~~---~v~vmnv~p~~~~-~~l~~~~----~RGlig---~~-~~~~~~f~typrtyDl~H~~ 536 (617)
++|||+|||.|.++.+|... ..-|..| |-. ..+..+- +.|+-. ++ .|..+.++..+. ||+|.++
T Consensus 58 ~~vLdiG~G~G~~~~~la~~~~~~~~v~~v---D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~-fD~v~~~ 133 (210)
T 3c3p_A 58 QLVVVPGDGLGCASWWFARAISISSRVVMI---DPDRDNVEHARRMLHDNGLIDRVELQVGDPLGIAAGQRD-IDILFMD 133 (210)
T ss_dssp SEEEEESCGGGHHHHHHHTTSCTTCEEEEE---ESCHHHHHHHHHHHHHHSGGGGEEEEESCHHHHHTTCCS-EEEEEEE
T ss_pred CEEEEEcCCccHHHHHHHHhCCCCCEEEEE---ECCHHHHHHHHHHHHHCCCCceEEEEEecHHHHhccCCC-CCEEEEc
Confidence 58999999999999888654 2222222 222 3333332 234421 22 233333344456 9999755
Q ss_pred ccccccccCCCCCChhhHHhhhhhcccCCceEEEec
Q 039518 537 HLFSHYKNRGEVCSLEDIMLEMDLIIRPQGFIIIRD 572 (617)
Q Consensus 537 ~~~s~~~~~~~~c~~~~~l~e~dRilRP~G~~i~~d 572 (617)
.- .-....++-++-|+|+|||.+++.+
T Consensus 134 ~~---------~~~~~~~l~~~~~~LkpgG~lv~~~ 160 (210)
T 3c3p_A 134 CD---------VFNGADVLERMNRCLAKNALLIAVN 160 (210)
T ss_dssp TT---------TSCHHHHHHHHGGGEEEEEEEEEES
T ss_pred CC---------hhhhHHHHHHHHHhcCCCeEEEEEC
Confidence 21 2345678899999999999999964
No 436
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=96.96 E-value=0.00047 Score=71.44 Aligned_cols=97 Identities=13% Similarity=0.100 Sum_probs=53.3
Q ss_pred eeEEeccccccchhhhccCC-CeEEEEeccCCCCchhHHH-Hh-hcc--cccccccCCCCCCCCCccchhhccccccccc
Q 039518 469 RNAMDMNAYCGGFAVALNSL-PVWVMNIVPISMKNTLSAI-YN-RGI--LGAFHDWCEPFSTYPRTYDLLHANHLFSHYK 543 (617)
Q Consensus 469 Rn~mDm~~~~g~faa~l~~~-~v~vmnv~p~~~~~~l~~~-~~-RGl--ig~~~~~~~~f~typrtyDl~H~~~~~s~~~ 543 (617)
..|||+|||.|+|+..|.+. .|.-+-+-...++..+..+ .+ .|. +-+... ...+..-+.+||+|.++..++ .
T Consensus 84 ~~VLDlGcG~G~~s~~la~~~~V~gvD~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~D~~~l~~~~fD~V~sd~~~~-~- 160 (305)
T 2p41_A 84 GKVVDLGCGRGGWSYYCGGLKNVREVKGLTKGGPGHEEPIPMSTYGWNLVRLQSG-VDVFFIPPERCDTLLCDIGES-S- 160 (305)
T ss_dssp EEEEEETCTTSHHHHHHHTSTTEEEEEEECCCSTTSCCCCCCCSTTGGGEEEECS-CCTTTSCCCCCSEEEECCCCC-C-
T ss_pred CEEEEEcCCCCHHHHHHHhcCCEEEEeccccCchhHHHHHHhhhcCCCCeEEEec-cccccCCcCCCCEEEECCccc-c-
Confidence 68999999999999888776 3444433111111111000 00 111 111111 012211147899999876664 0
Q ss_pred cCCCCCChh-----hHHhhhhhcccCCceEEEe
Q 039518 544 NRGEVCSLE-----DIMLEMDLIIRPQGFIIIR 571 (617)
Q Consensus 544 ~~~~~c~~~-----~~l~e~dRilRP~G~~i~~ 571 (617)
....++ .+|-++-|+|+|||.+++.
T Consensus 161 ---g~~~~d~~~~l~~L~~~~~~LkpGG~~v~k 190 (305)
T 2p41_A 161 ---PNPTVEAGRTLRVLNLVENWLSNNTQFCVK 190 (305)
T ss_dssp ---SSHHHHHHHHHHHHHHHHHHCCTTCEEEEE
T ss_pred ---CcchhhHHHHHHHHHHHHHHhCCCCEEEEE
Confidence 001111 3688899999999999995
No 437
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=96.94 E-value=0.00035 Score=69.29 Aligned_cols=116 Identities=12% Similarity=0.163 Sum_probs=63.7
Q ss_pred eeEEeccccccchhhhccCC--CeEEEEeccCCCC-chhHHHHhh------------cccc---cccccCCCCCC-C-CC
Q 039518 469 RNAMDMNAYCGGFAVALNSL--PVWVMNIVPISMK-NTLSAIYNR------------GILG---AFHDWCEPFST-Y-PR 528 (617)
Q Consensus 469 Rn~mDm~~~~g~faa~l~~~--~v~vmnv~p~~~~-~~l~~~~~R------------Glig---~~~~~~~~f~t-y-pr 528 (617)
..|||+|||.|+|+.+|... .. +|+-.|-. .-+..+-++ |+-. +..|..+.++. + +.
T Consensus 51 ~~vLDiGcG~G~~~~~la~~~~~~---~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~nv~~~~~D~~~~l~~~~~~~ 127 (246)
T 2vdv_E 51 VTIADIGCGFGGLMIDLSPAFPED---LILGMEIRVQVTNYVEDRIIALRNNTASKHGFQNINVLRGNAMKFLPNFFEKG 127 (246)
T ss_dssp EEEEEETCTTSHHHHHHHHHSTTS---EEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTTTEEEEECCTTSCGGGTSCTT
T ss_pred CEEEEEcCCCCHHHHHHHHhCCCC---CEEEEEcCHHHHHHHHHHHHHHhhccccccCCCcEEEEeccHHHHHHHhcccc
Confidence 67999999999999888643 22 22222333 333333222 5421 12232222221 2 26
Q ss_pred ccchhhcccccc-cc-c--cCCCCCChhhHHhhhhhcccCCceEEEe-cChHHHHHHHhhhhcCCc
Q 039518 529 TYDLLHANHLFS-HY-K--NRGEVCSLEDIMLEMDLIIRPQGFIIIR-DEKSLITRIRDLAPKFLW 589 (617)
Q Consensus 529 tyDl~H~~~~~s-~~-~--~~~~~c~~~~~l~e~dRilRP~G~~i~~-d~~~~~~~~~~~~~~~~W 589 (617)
++|.|... |. .| + ....|-....+|-++-|+|+|||.+++. |..+..+.+.+.+..-.+
T Consensus 128 ~~d~v~~~--~p~p~~k~~~~~~r~~~~~~l~~~~~~LkpgG~l~~~td~~~~~~~~~~~~~~~~~ 191 (246)
T 2vdv_E 128 QLSKMFFC--FPDPHFKQRKHKARIITNTLLSEYAYVLKEGGVVYTITDVKDLHEWMVKHLEEHPL 191 (246)
T ss_dssp CEEEEEEE--SCCCC------CSSCCCHHHHHHHHHHEEEEEEEEEEESCHHHHHHHHHHHHHSTT
T ss_pred ccCEEEEE--CCCcccccchhHHhhccHHHHHHHHHHcCCCCEEEEEeccHHHHHHHHHHHHhCcC
Confidence 77776521 22 01 0 0011222258999999999999999984 776666666665544433
No 438
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=96.94 E-value=0.00056 Score=68.28 Aligned_cols=98 Identities=13% Similarity=0.208 Sum_probs=56.1
Q ss_pred CCCCCeeeEEeccccccchhhhccCC-----CeEEEEeccCCCCchhHHHHhh-cccccccccCCCC--CCCCCccchhh
Q 039518 463 VNETEIRNAMDMNAYCGGFAVALNSL-----PVWVMNIVPISMKNTLSAIYNR-GILGAFHDWCEPF--STYPRTYDLLH 534 (617)
Q Consensus 463 ~~~~~~Rn~mDm~~~~g~faa~l~~~-----~v~vmnv~p~~~~~~l~~~~~R-Glig~~~~~~~~f--~typrtyDl~H 534 (617)
+.+| -.|||+|||.|++++.|.+. .|..+-+-|.-...-+..+-+| .+.-+..|-..+. ...+..||+|.
T Consensus 74 l~~g--~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~r~nv~~i~~Da~~~~~~~~~~~~~D~I~ 151 (232)
T 3id6_C 74 IRKG--TKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQRRPNIFPLLADARFPQSYKSVVENVDVLY 151 (232)
T ss_dssp CCTT--CEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHHCTTEEEEECCTTCGGGTTTTCCCEEEEE
T ss_pred CCCC--CEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhhcCCeEEEEcccccchhhhccccceEEEE
Confidence 5566 57999999999999877542 3444433221100112333344 2444445544331 11235799987
Q ss_pred ccccccccccCCCCCChhhHHh-hhhhcccCCceEEEe
Q 039518 535 ANHLFSHYKNRGEVCSLEDIML-EMDLIIRPQGFIIIR 571 (617)
Q Consensus 535 ~~~~~s~~~~~~~~c~~~~~l~-e~dRilRP~G~~i~~ 571 (617)
++..+ .....+|+ .+.|+|+|||.+++.
T Consensus 152 ~d~a~---------~~~~~il~~~~~~~LkpGG~lvis 180 (232)
T 3id6_C 152 VDIAQ---------PDQTDIAIYNAKFFLKVNGDMLLV 180 (232)
T ss_dssp ECCCC---------TTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ecCCC---------hhHHHHHHHHHHHhCCCCeEEEEE
Confidence 55322 23334555 456799999999986
No 439
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=96.94 E-value=0.00056 Score=63.67 Aligned_cols=97 Identities=13% Similarity=0.103 Sum_probs=64.0
Q ss_pred HHHHHHHhhhhhccCCcccCCCCeEEEECCCCc-HHHHHhcc-CCCcEEEeeecCCcHHHHHHHHHhCCCcEEEEecCCC
Q 039518 208 EYIQRLGNMMTNETGNLRSAGVFQVLDVGCGVA-SFSAFLLP-LDIQTMSFAPKDGHENQIQFALERGIGAMISALSTKQ 285 (617)
Q Consensus 208 ~Y~~~L~~~L~~~~~~lr~~~g~rVLDIGCGtG-~~a~~La~-~gv~~v~v~~iDis~~~lq~A~erg~~~~~~~~d~~~ 285 (617)
+..+.|.+++.... .++.+|||||||.| ..+..|++ .++ ++.++|+++.+++ +...|+.+
T Consensus 20 ~m~e~LaeYI~~~~-----~~~~rVlEVG~G~g~~vA~~La~~~g~---~V~atDInp~Av~----------~v~dDiF~ 81 (153)
T 2k4m_A 20 HMWNDLAVYIIRCS-----GPGTRVVEVGAGRFLYVSDYIRKHSKV---DLVLTDIKPSHGG----------IVRDDITS 81 (153)
T ss_dssp HHHHHHHHHHHHHS-----CSSSEEEEETCTTCCHHHHHHHHHSCC---EEEEECSSCSSTT----------EECCCSSS
T ss_pred hHHHHHHHHHHhcC-----CCCCcEEEEccCCChHHHHHHHHhCCC---eEEEEECCccccc----------eEEccCCC
Confidence 33555666663321 23457999999999 69999997 776 5677798877655 55666654
Q ss_pred CCCCC--CCeeEEEecccccccccchHHHHHHHHHhccCCeEEEEE
Q 039518 286 LPYPS--SSFEMVHCSRCRVDWHANDGILLKEVDRVLRPNGYFVYS 329 (617)
Q Consensus 286 Lpf~d--~sFDlV~~s~~l~h~~~d~~~~L~el~RvLrPGG~Liis 329 (617)
|..+ +.||+|.+.+. +.+....+.++.+.+ |.-++|.
T Consensus 82 -P~~~~Y~~~DLIYsirP----P~El~~~i~~lA~~v--~adliI~ 120 (153)
T 2k4m_A 82 -PRMEIYRGAALIYSIRP----PAEIHSSLMRVADAV--GARLIIK 120 (153)
T ss_dssp -CCHHHHTTEEEEEEESC----CTTTHHHHHHHHHHH--TCEEEEE
T ss_pred -CcccccCCcCEEEEcCC----CHHHHHHHHHHHHHc--CCCEEEE
Confidence 3222 47999997653 335566677777655 4556664
No 440
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=96.86 E-value=0.00034 Score=68.89 Aligned_cols=125 Identities=13% Similarity=0.172 Sum_probs=71.9
Q ss_pred eeEEeccccccchhhhccCC-----CeEEEEeccCCCCchhHHHHh----hcccc---c-ccccCCCCCCCC-----Ccc
Q 039518 469 RNAMDMNAYCGGFAVALNSL-----PVWVMNIVPISMKNTLSAIYN----RGILG---A-FHDWCEPFSTYP-----RTY 530 (617)
Q Consensus 469 Rn~mDm~~~~g~faa~l~~~-----~v~vmnv~p~~~~~~l~~~~~----RGlig---~-~~~~~~~f~typ-----rty 530 (617)
++|||+|||.|.++.+|... .|..+-+-| ..+.++-+ .|+-. + ..|..+.++..| .+|
T Consensus 74 ~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~----~~~~~a~~~~~~~g~~~~i~~~~~d~~~~l~~l~~~~~~~~f 149 (232)
T 3cbg_A 74 KQVLEIGVFRGYSALAMALQLPPDGQIIACDQDP----NATAIAKKYWQKAGVAEKISLRLGPALATLEQLTQGKPLPEF 149 (232)
T ss_dssp CEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCH----HHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHTSSSCCCE
T ss_pred CEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCH----HHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCCc
Confidence 58999999999998888653 233332211 33333332 24422 1 122222122222 689
Q ss_pred chhhccccccccccCCCCCChhhHHhhhhhcccCCceEEEecC------------hHHHHHHHh----hhhcCCceEEEe
Q 039518 531 DLLHANHLFSHYKNRGEVCSLEDIMLEMDLIIRPQGFIIIRDE------------KSLITRIRD----LAPKFLWDVELH 594 (617)
Q Consensus 531 Dl~H~~~~~s~~~~~~~~c~~~~~l~e~dRilRP~G~~i~~d~------------~~~~~~~~~----~~~~~~W~~~~~ 594 (617)
|+|.++.... ....++-++-|+|||||.+++.+- ......+++ +...-+++..+.
T Consensus 150 D~V~~d~~~~---------~~~~~l~~~~~~LkpgG~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l 220 (232)
T 3cbg_A 150 DLIFIDADKR---------NYPRYYEIGLNLLRRGGLMVIDNVLWHGKVTEVDPQEAQTQVLQQFNRDLAQDERVRISVI 220 (232)
T ss_dssp EEEEECSCGG---------GHHHHHHHHHHTEEEEEEEEEECTTGGGGGGCSSCCSHHHHHHHHHHHHHTTCTTEEEEEE
T ss_pred CEEEECCCHH---------HHHHHHHHHHHHcCCCeEEEEeCCCcCCccCCcccCChHHHHHHHHHHHHhhCCCeEEEEE
Confidence 9997554322 235678889999999999999532 122233333 344556776665
Q ss_pred eccccCCCceeEEEEEec
Q 039518 595 SLENREKKMESVLICRKK 612 (617)
Q Consensus 595 ~~e~~~~~~~~~l~~~k~ 612 (617)
.. .+.+.+++|.
T Consensus 221 p~------~dG~~~~~~~ 232 (232)
T 3cbg_A 221 PL------GDGMTLALKK 232 (232)
T ss_dssp CS------BTCEEEEEEC
T ss_pred Ec------CCeEEEEEeC
Confidence 43 2568888874
No 441
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=96.85 E-value=0.00034 Score=67.89 Aligned_cols=98 Identities=15% Similarity=0.176 Sum_probs=57.7
Q ss_pred HHHhcc--CCCCCeeeEEeccccccchhhhccCC---CeEEEEeccCCCC-chhHHHHhh----c--------ccccccc
Q 039518 457 YWQLMN--VNETEIRNAMDMNAYCGGFAVALNSL---PVWVMNIVPISMK-NTLSAIYNR----G--------ILGAFHD 518 (617)
Q Consensus 457 y~~~~~--~~~~~~Rn~mDm~~~~g~faa~l~~~---~v~vmnv~p~~~~-~~l~~~~~R----G--------lig~~~~ 518 (617)
....+. +..+ .+|||+|||.|.+++.|... ..-|..+ |-. ..+..+-++ | +--+..|
T Consensus 67 ~l~~l~~~~~~~--~~vLDiG~G~G~~~~~la~~~~~~~~v~~v---D~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d 141 (226)
T 1i1n_A 67 ALELLFDQLHEG--AKALDVGSGSGILTACFARMVGCTGKVIGI---DHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGD 141 (226)
T ss_dssp HHHHTTTTSCTT--CEEEEETCTTSHHHHHHHHHHCTTCEEEEE---ESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESC
T ss_pred HHHHHHhhCCCC--CEEEEEcCCcCHHHHHHHHHhCCCcEEEEE---eCCHHHHHHHHHHHHhhcccccCCCcEEEEECC
Confidence 344443 4444 48999999999999888642 1222222 222 333333222 2 1112234
Q ss_pred cCCCCCCCCCccchhhccccccccccCCCCCChhhHHhhhhhcccCCceEEEec
Q 039518 519 WCEPFSTYPRTYDLLHANHLFSHYKNRGEVCSLEDIMLEMDLIIRPQGFIIIRD 572 (617)
Q Consensus 519 ~~~~f~typrtyDl~H~~~~~s~~~~~~~~c~~~~~l~e~dRilRP~G~~i~~d 572 (617)
..+.+. -+..||+|+++..+. .++-++-|+|+|||.+++.-
T Consensus 142 ~~~~~~-~~~~fD~i~~~~~~~------------~~~~~~~~~LkpgG~lv~~~ 182 (226)
T 1i1n_A 142 GRMGYA-EEAPYDAIHVGAAAP------------VVPQALIDQLKPGGRLILPV 182 (226)
T ss_dssp GGGCCG-GGCCEEEEEECSBBS------------SCCHHHHHTEEEEEEEEEEE
T ss_pred cccCcc-cCCCcCEEEECCchH------------HHHHHHHHhcCCCcEEEEEE
Confidence 333222 136899999776664 34568889999999999974
No 442
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=96.83 E-value=0.0017 Score=65.36 Aligned_cols=112 Identities=8% Similarity=0.042 Sum_probs=69.8
Q ss_pred cCCCCCeeeEEeccccccchhhhccCC---CeEEEEeccCCCC-chhHHHHhh-----cc--c-ccccccCCCCCCCCCc
Q 039518 462 NVNETEIRNAMDMNAYCGGFAVALNSL---PVWVMNIVPISMK-NTLSAIYNR-----GI--L-GAFHDWCEPFSTYPRT 529 (617)
Q Consensus 462 ~~~~~~~Rn~mDm~~~~g~faa~l~~~---~v~vmnv~p~~~~-~~l~~~~~R-----Gl--i-g~~~~~~~~f~typrt 529 (617)
.+..+ .+|||+|||.|+++..|... ..-|.. .|.. ..+..+-++ |+ + -...|..+.++ +.+
T Consensus 107 ~~~~~--~~VLD~G~G~G~~~~~la~~~~~~~~v~~---vD~s~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~~~--~~~ 179 (275)
T 1yb2_A 107 GLRPG--MDILEVGVGSGNMSSYILYALNGKGTLTV---VERDEDNLKKAMDNLSEFYDIGNVRTSRSDIADFIS--DQM 179 (275)
T ss_dssp CCCTT--CEEEEECCTTSHHHHHHHHHHTTSSEEEE---ECSCHHHHHHHHHHHHTTSCCTTEEEECSCTTTCCC--SCC
T ss_pred CCCCc--CEEEEecCCCCHHHHHHHHHcCCCCEEEE---EECCHHHHHHHHHHHHhcCCCCcEEEEECchhccCc--CCC
Confidence 34444 58999999999999888654 232222 2333 455544444 52 1 12345555443 268
Q ss_pred cchhhccccccccccCCCCCChhhHHhhhhhcccCCceEEEecChH-HHHHHHhhhhcCCceE
Q 039518 530 YDLLHANHLFSHYKNRGEVCSLEDIMLEMDLIIRPQGFIIIRDEKS-LITRIRDLAPKFLWDV 591 (617)
Q Consensus 530 yDl~H~~~~~s~~~~~~~~c~~~~~l~e~dRilRP~G~~i~~d~~~-~~~~~~~~~~~~~W~~ 591 (617)
||+|-++ + -....+|-++-|+|+|||.+++.+... ..+++.+.++...|..
T Consensus 180 fD~Vi~~-~----------~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~l~~~Gf~~ 231 (275)
T 1yb2_A 180 YDAVIAD-I----------PDPWNHVQKIASMMKPGSVATFYLPNFDQSEKTVLSLSASGMHH 231 (275)
T ss_dssp EEEEEEC-C----------SCGGGSHHHHHHTEEEEEEEEEEESSHHHHHHHHHHSGGGTEEE
T ss_pred ccEEEEc-C----------cCHHHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHCCCeE
Confidence 9998741 1 123478999999999999999986543 5566666665555553
No 443
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=96.79 E-value=0.00071 Score=67.36 Aligned_cols=87 Identities=11% Similarity=0.089 Sum_probs=56.0
Q ss_pred eeEEeccccccchhhhccCC--CeEEEEeccCCCC-chhHHHHhhcc--cccccccCCCCCCCCCccchhhccccccccc
Q 039518 469 RNAMDMNAYCGGFAVALNSL--PVWVMNIVPISMK-NTLSAIYNRGI--LGAFHDWCEPFSTYPRTYDLLHANHLFSHYK 543 (617)
Q Consensus 469 Rn~mDm~~~~g~faa~l~~~--~v~vmnv~p~~~~-~~l~~~~~RGl--ig~~~~~~~~f~typrtyDl~H~~~~~s~~~ 543 (617)
.+|||+|||.|.++..|.+. ..-| +-.|-. ..+..+-+++- -=+..|.. .++.-+.+||+|.+....
T Consensus 87 ~~vLdiG~G~G~~~~~l~~~~~~~~v---~~vD~s~~~~~~a~~~~~~~~~~~~d~~-~~~~~~~~fD~v~~~~~~---- 158 (269)
T 1p91_A 87 TAVLDIGCGEGYYTHAFADALPEITT---FGLDVSKVAIKAAAKRYPQVTFCVASSH-RLPFSDTSMDAIIRIYAP---- 158 (269)
T ss_dssp CEEEEETCTTSTTHHHHHHTCTTSEE---EEEESCHHHHHHHHHHCTTSEEEECCTT-SCSBCTTCEEEEEEESCC----
T ss_pred CEEEEECCCCCHHHHHHHHhCCCCeE---EEEeCCHHHHHHHHHhCCCcEEEEcchh-hCCCCCCceeEEEEeCCh----
Confidence 57999999999999888654 3222 223333 56666766651 11112222 223223789999864331
Q ss_pred cCCCCCChhhHHhhhhhcccCCceEEEec
Q 039518 544 NRGEVCSLEDIMLEMDLIIRPQGFIIIRD 572 (617)
Q Consensus 544 ~~~~~c~~~~~l~e~dRilRP~G~~i~~d 572 (617)
..+-|+-|+|||||.+++.+
T Consensus 159 ---------~~l~~~~~~L~pgG~l~~~~ 178 (269)
T 1p91_A 159 ---------CKAEELARVVKPGGWVITAT 178 (269)
T ss_dssp ---------CCHHHHHHHEEEEEEEEEEE
T ss_pred ---------hhHHHHHHhcCCCcEEEEEE
Confidence 25899999999999999874
No 444
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=96.76 E-value=0.0026 Score=63.83 Aligned_cols=121 Identities=9% Similarity=0.042 Sum_probs=69.7
Q ss_pred eeeEEeccccccchhhhccCC-CeEEEEeccCCCC-chhHHHHh-------hcc---cccc-cccCCCCC-----CC-CC
Q 039518 468 IRNAMDMNAYCGGFAVALNSL-PVWVMNIVPISMK-NTLSAIYN-------RGI---LGAF-HDWCEPFS-----TY-PR 528 (617)
Q Consensus 468 ~Rn~mDm~~~~g~faa~l~~~-~v~vmnv~p~~~~-~~l~~~~~-------RGl---ig~~-~~~~~~f~-----ty-pr 528 (617)
-.+|||+|||.|.++..|..+ |- .+|.-.|-. ..+..+-+ .|+ +-++ .|..+..+ .+ +.
T Consensus 37 ~~~VLDlG~G~G~~~l~la~~~~~--~~v~gvDi~~~~~~~a~~n~~~~~~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~ 114 (260)
T 2ozv_A 37 ACRIADLGAGAGAAGMAVAARLEK--AEVTLYERSQEMAEFARRSLELPDNAAFSARIEVLEADVTLRAKARVEAGLPDE 114 (260)
T ss_dssp CEEEEECCSSSSHHHHHHHHHCTT--EEEEEEESSHHHHHHHHHHTTSGGGTTTGGGEEEEECCTTCCHHHHHHTTCCTT
T ss_pred CCEEEEeCChHhHHHHHHHHhCCC--CeEEEEECCHHHHHHHHHHHHhhhhCCCcceEEEEeCCHHHHhhhhhhhccCCC
Confidence 358999999999998877543 11 122333333 33333322 233 2222 23322211 12 37
Q ss_pred ccchhhccccccccc------------cCCCCCChhhHHhhhhhcccCCceEEEecChHHHHHHHhhhhcCCceE
Q 039518 529 TYDLLHANHLFSHYK------------NRGEVCSLEDIMLEMDLIIRPQGFIIIRDEKSLITRIRDLAPKFLWDV 591 (617)
Q Consensus 529 tyDl~H~~~~~s~~~------------~~~~~c~~~~~l~e~dRilRP~G~~i~~d~~~~~~~~~~~~~~~~W~~ 591 (617)
+||+|-++--|..-. .....+.++.++-++-|+|+|||.+++--..+.+.++.+.++.- |..
T Consensus 115 ~fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~l~~~-~~~ 188 (260)
T 2ozv_A 115 HFHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSGGQLSLISRPQSVAEIIAACGSR-FGG 188 (260)
T ss_dssp CEEEEEECCCC---------------------CCHHHHHHHHHHHEEEEEEEEEEECGGGHHHHHHHHTTT-EEE
T ss_pred CcCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCCCEEEEEEcHHHHHHHHHHHHhc-CCc
Confidence 899999874443110 00234667899999999999999998876666666777766663 653
No 445
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=96.75 E-value=0.0018 Score=65.12 Aligned_cols=115 Identities=10% Similarity=0.061 Sum_probs=71.6
Q ss_pred HHhccCCCCCeeeEEeccccccchhhhccCC---CeEEEEeccCCCC-chhHHHHhh----cc----cccccccCCCCCC
Q 039518 458 WQLMNVNETEIRNAMDMNAYCGGFAVALNSL---PVWVMNIVPISMK-NTLSAIYNR----GI----LGAFHDWCEPFST 525 (617)
Q Consensus 458 ~~~~~~~~~~~Rn~mDm~~~~g~faa~l~~~---~v~vmnv~p~~~~-~~l~~~~~R----Gl----ig~~~~~~~~f~t 525 (617)
...+.+..+ .+|||+|||.|.++.+|... ..- |+-.|.. ..+..+-++ |+ --...|..+.++
T Consensus 105 ~~~~~~~~~--~~VLDiG~G~G~~~~~la~~~~~~~~---v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~- 178 (277)
T 1o54_A 105 AMMLDVKEG--DRIIDTGVGSGAMCAVLARAVGSSGK---VFAYEKREEFAKLAESNLTKWGLIERVTIKVRDISEGFD- 178 (277)
T ss_dssp HHHTTCCTT--CEEEEECCTTSHHHHHHHHHTTTTCE---EEEECCCHHHHHHHHHHHHHTTCGGGEEEECCCGGGCCS-
T ss_pred HHHhCCCCC--CEEEEECCcCCHHHHHHHHHhCCCcE---EEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHccc-
Confidence 333445555 48999999999999888643 232 2333443 555555444 43 122345555433
Q ss_pred CCCccchhhccccccccccCCCCCChhhHHhhhhhcccCCceEEEecC-hHHHHHHHhhhhcCCce
Q 039518 526 YPRTYDLLHANHLFSHYKNRGEVCSLEDIMLEMDLIIRPQGFIIIRDE-KSLITRIRDLAPKFLWD 590 (617)
Q Consensus 526 yprtyDl~H~~~~~s~~~~~~~~c~~~~~l~e~dRilRP~G~~i~~d~-~~~~~~~~~~~~~~~W~ 590 (617)
+.+||+|-++- -....+|-++-|+|+|||.+++... .+.+.++.+.++...|.
T Consensus 179 -~~~~D~V~~~~-----------~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~l~~~gf~ 232 (277)
T 1o54_A 179 -EKDVDALFLDV-----------PDPWNYIDKCWEALKGGGRFATVCPTTNQVQETLKKLQELPFI 232 (277)
T ss_dssp -CCSEEEEEECC-----------SCGGGTHHHHHHHEEEEEEEEEEESSHHHHHHHHHHHHHSSEE
T ss_pred -CCccCEEEECC-----------cCHHHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHCCCc
Confidence 26899987421 1224688899999999999999865 34556666666555565
No 446
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=96.75 E-value=0.00015 Score=66.54 Aligned_cols=94 Identities=10% Similarity=0.083 Sum_probs=55.4
Q ss_pred eeEEeccccccchhhhccCCCeEEEEeccCCCC-chhHHHHh----hcc-ccc-ccccCCCCCCCC---Cccchhhcccc
Q 039518 469 RNAMDMNAYCGGFAVALNSLPVWVMNIVPISMK-NTLSAIYN----RGI-LGA-FHDWCEPFSTYP---RTYDLLHANHL 538 (617)
Q Consensus 469 Rn~mDm~~~~g~faa~l~~~~v~vmnv~p~~~~-~~l~~~~~----RGl-ig~-~~~~~~~f~typ---rtyDl~H~~~~ 538 (617)
.+|||+|||.|.++.+|.....- |+-.|.. ..+..+-+ .|+ +-+ ..|+.+..+..+ .+||+|.++..
T Consensus 43 ~~vLD~GcG~G~~~~~l~~~~~~---v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~i~~~~~ 119 (171)
T 1ws6_A 43 GRFLDPFAGSGAVGLEAASEGWE---AVLVEKDPEAVRLLKENVRRTGLGARVVALPVEVFLPEAKAQGERFTVAFMAPP 119 (171)
T ss_dssp CEEEEETCSSCHHHHHHHHTTCE---EEEECCCHHHHHHHHHHHHHHTCCCEEECSCHHHHHHHHHHTTCCEEEEEECCC
T ss_pred CeEEEeCCCcCHHHHHHHHCCCe---EEEEeCCHHHHHHHHHHHHHcCCceEEEeccHHHHHHhhhccCCceEEEEECCC
Confidence 57999999999999888655322 3333443 44444333 232 111 112222122122 27999998776
Q ss_pred ccccccCCCCCChhhHHhhhh--hcccCCceEEEecC
Q 039518 539 FSHYKNRGEVCSLEDIMLEMD--LIIRPQGFIIIRDE 573 (617)
Q Consensus 539 ~s~~~~~~~~c~~~~~l~e~d--RilRP~G~~i~~d~ 573 (617)
|. -..+.++-++- |+|+|||.+++...
T Consensus 120 ~~--------~~~~~~~~~~~~~~~L~~gG~~~~~~~ 148 (171)
T 1ws6_A 120 YA--------MDLAALFGELLASGLVEAGGLYVLQHP 148 (171)
T ss_dssp TT--------SCTTHHHHHHHHHTCEEEEEEEEEEEE
T ss_pred Cc--------hhHHHHHHHHHhhcccCCCcEEEEEeC
Confidence 54 12235555665 99999999999744
No 447
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=96.74 E-value=0.00085 Score=62.49 Aligned_cols=58 Identities=12% Similarity=0.249 Sum_probs=40.7
Q ss_pred CCccchhhccccccccccCCCCCChhhHHhhhhhcccCCceEEEecChH----------HHHHHHhhhhcCCc
Q 039518 527 PRTYDLLHANHLFSHYKNRGEVCSLEDIMLEMDLIIRPQGFIIIRDEKS----------LITRIRDLAPKFLW 589 (617)
Q Consensus 527 prtyDl~H~~~~~s~~~~~~~~c~~~~~l~e~dRilRP~G~~i~~d~~~----------~~~~~~~~~~~~~W 589 (617)
+.+||+|.+..++.+. .-+...+|-|+-|+|||||++++.+... ..+++.+.++.--+
T Consensus 61 ~~~fD~V~~~~~l~~~-----~~~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf 128 (176)
T 2ld4_A 61 ESSFDIILSGLVPGST-----TLHSAEILAEIARILRPGGCLFLKEPVETAVDNNSKVKTASKLCSALTLSGL 128 (176)
T ss_dssp SSCEEEEEECCSTTCC-----CCCCHHHHHHHHHHEEEEEEEEEEEEEESSSCSSSSSCCHHHHHHHHHHTTC
T ss_pred CCCEeEEEECChhhhc-----ccCHHHHHHHHHHHCCCCEEEEEEcccccccccccccCCHHHHHHHHHHCCC
Confidence 4899999987776632 1235789999999999999999964311 14556666654444
No 448
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=96.73 E-value=0.001 Score=66.01 Aligned_cols=119 Identities=11% Similarity=0.157 Sum_probs=65.9
Q ss_pred eeEEeccccccchhhhccCC--CeEEEEeccCCCC-chhHHHHh----------hcc--cc-cccccCCCCCC-C-CCcc
Q 039518 469 RNAMDMNAYCGGFAVALNSL--PVWVMNIVPISMK-NTLSAIYN----------RGI--LG-AFHDWCEPFST-Y-PRTY 530 (617)
Q Consensus 469 Rn~mDm~~~~g~faa~l~~~--~v~vmnv~p~~~~-~~l~~~~~----------RGl--ig-~~~~~~~~f~t-y-prty 530 (617)
..|||+|||.|.|+..|... ..-|.- .|-. ..+..+-+ .|+ |- +..|.-+.++. + +.+|
T Consensus 48 ~~vLDiGcG~G~~~~~la~~~p~~~v~G---iDis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~~~~l~~~~~~~~~ 124 (235)
T 3ckk_A 48 VEFADIGCGYGGLLVELSPLFPDTLILG---LEIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSNAMKHLPNFFYKGQL 124 (235)
T ss_dssp EEEEEETCTTCHHHHHHGGGSTTSEEEE---EESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECCTTTCHHHHCCTTCE
T ss_pred CeEEEEccCCcHHHHHHHHHCCCCeEEE---EECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECcHHHhhhhhCCCcCe
Confidence 57999999999999988653 222222 2333 33333321 233 11 12233222221 2 4789
Q ss_pred chhhcccccc-ccc---cCCCCCChhhHHhhhhhcccCCceEEEe-cChHHHHHHHhhhhcCC-ceEE
Q 039518 531 DLLHANHLFS-HYK---NRGEVCSLEDIMLEMDLIIRPQGFIIIR-DEKSLITRIRDLAPKFL-WDVE 592 (617)
Q Consensus 531 Dl~H~~~~~s-~~~---~~~~~c~~~~~l~e~dRilRP~G~~i~~-d~~~~~~~~~~~~~~~~-W~~~ 592 (617)
|+|... |. .|. ..+.|.....+|-|+-|+|+|||.+++. |..+..+.+.+.+..-- |+..
T Consensus 125 D~v~~~--~~dp~~k~~h~krr~~~~~~l~~~~~~LkpGG~l~~~td~~~~~~~~~~~l~~~~~f~~~ 190 (235)
T 3ckk_A 125 TKMFFL--FPDPHFKRTKHKWRIISPTLLAEYAYVLRVGGLVYTITDVLELHDWMCTHFEEHPLFERV 190 (235)
T ss_dssp EEEEEE--SCC-----------CCCHHHHHHHHHHEEEEEEEEEEESCHHHHHHHHHHHHTSTTEEEE
T ss_pred eEEEEe--CCCchhhhhhhhhhhhhHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHHHHHHHCCCcccc
Confidence 998642 22 110 1133444468999999999999999985 76666666666554432 5443
No 449
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=96.71 E-value=0.00053 Score=66.99 Aligned_cols=92 Identities=15% Similarity=0.235 Sum_probs=58.8
Q ss_pred eeEEeccccccchhhhccCC--CeEEEEeccCCCC-chhHHHHhh----cc---cc-cccccCCCCCCC--CCccchhhc
Q 039518 469 RNAMDMNAYCGGFAVALNSL--PVWVMNIVPISMK-NTLSAIYNR----GI---LG-AFHDWCEPFSTY--PRTYDLLHA 535 (617)
Q Consensus 469 Rn~mDm~~~~g~faa~l~~~--~v~vmnv~p~~~~-~~l~~~~~R----Gl---ig-~~~~~~~~f~ty--prtyDl~H~ 535 (617)
.+|||+|||.|.++.+|... .. +|+-.|.. ..+..+-++ |+ +- +..|..+..+.. +.+||+|-+
T Consensus 56 ~~vLdiG~G~G~~~~~la~~~~~~---~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~~ 132 (233)
T 2gpy_A 56 ARILEIGTAIGYSAIRMAQALPEA---TIVSIERDERRYEEAHKHVKALGLESRIELLFGDALQLGEKLELYPLFDVLFI 132 (233)
T ss_dssp SEEEEECCTTSHHHHHHHHHCTTC---EEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCGGGSHHHHTTSCCEEEEEE
T ss_pred CEEEEecCCCcHHHHHHHHHCCCC---EEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhcccCCCccEEEE
Confidence 58999999999999888643 22 22333443 455555444 44 22 223333322222 478999986
Q ss_pred cccccccccCCCCCChhhHHhhhhhcccCCceEEEec
Q 039518 536 NHLFSHYKNRGEVCSLEDIMLEMDLIIRPQGFIIIRD 572 (617)
Q Consensus 536 ~~~~s~~~~~~~~c~~~~~l~e~dRilRP~G~~i~~d 572 (617)
+...+ ....+|-++-|+|+|||.+++.+
T Consensus 133 ~~~~~---------~~~~~l~~~~~~L~pgG~lv~~~ 160 (233)
T 2gpy_A 133 DAAKG---------QYRRFFDMYSPMVRPGGLILSDN 160 (233)
T ss_dssp EGGGS---------CHHHHHHHHGGGEEEEEEEEEET
T ss_pred CCCHH---------HHHHHHHHHHHHcCCCeEEEEEc
Confidence 55443 34578899999999999999974
No 450
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=96.69 E-value=0.00016 Score=77.85 Aligned_cols=122 Identities=13% Similarity=0.182 Sum_probs=73.8
Q ss_pred HHHHHhcc-CCCCCeeeEEecccc------ccchhhhccCC-----CeEEEEeccCCCCchhHHHHhhcccccccccCCC
Q 039518 455 RHYWQLMN-VNETEIRNAMDMNAY------CGGFAVALNSL-----PVWVMNIVPISMKNTLSAIYNRGILGAFHDWCEP 522 (617)
Q Consensus 455 ~~y~~~~~-~~~~~~Rn~mDm~~~------~g~faa~l~~~-----~v~vmnv~p~~~~~~l~~~~~RGlig~~~~~~~~ 522 (617)
..|.+.|. +.. +-.+|||+||| .||....|... .|.-+-+-|.- . .....+-=+..|-.+
T Consensus 204 ~~Ye~lL~~l~~-~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m----~--~~~~rI~fv~GDa~d- 275 (419)
T 3sso_A 204 PHYDRHFRDYRN-QQVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKS----H--VDELRIRTIQGDQND- 275 (419)
T ss_dssp HHHHHHHGGGTT-SCCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCG----G--GCBTTEEEEECCTTC-
T ss_pred HHHHHHHHhhcC-CCCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHH----h--hcCCCcEEEEecccc-
Confidence 45666665 332 23789999999 77776666432 34555444432 1 011111111222211
Q ss_pred CCCC------CCccchhhccccccccccCCCCCChhhHHhhhhhcccCCceEEEecC------------------hHHHH
Q 039518 523 FSTY------PRTYDLLHANHLFSHYKNRGEVCSLEDIMLEMDLIIRPQGFIIIRDE------------------KSLIT 578 (617)
Q Consensus 523 f~ty------prtyDl~H~~~~~s~~~~~~~~c~~~~~l~e~dRilRP~G~~i~~d~------------------~~~~~ 578 (617)
+++- ..+||+|.+++. ++ . ......|-|+=|+|||||++|+.|- ..+++
T Consensus 276 lpf~~~l~~~d~sFDlVisdgs--H~---~--~d~~~aL~el~rvLKPGGvlVi~Dl~tsy~p~f~G~~~~~~~~~tii~ 348 (419)
T 3sso_A 276 AEFLDRIARRYGPFDIVIDDGS--HI---N--AHVRTSFAALFPHVRPGGLYVIEDMWTAYWPGFGGQADPQECSGTSLG 348 (419)
T ss_dssp HHHHHHHHHHHCCEEEEEECSC--CC---H--HHHHHHHHHHGGGEEEEEEEEEECGGGGGCTBTTCCSSTTCCTTSHHH
T ss_pred cchhhhhhcccCCccEEEECCc--cc---c--hhHHHHHHHHHHhcCCCeEEEEEecccccCcccCCCccCCcchhHHHH
Confidence 1111 278999997643 22 1 1345789999999999999999632 45788
Q ss_pred HHHhhhhcCCceE
Q 039518 579 RIRDLAPKFLWDV 591 (617)
Q Consensus 579 ~~~~~~~~~~W~~ 591 (617)
.++++...+.|+-
T Consensus 349 ~lk~l~D~l~~~~ 361 (419)
T 3sso_A 349 LLKSLIDAIQHQE 361 (419)
T ss_dssp HHHHHHHHHTGGG
T ss_pred HHHHHHHHhcccc
Confidence 9999999888764
No 451
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=96.66 E-value=0.00079 Score=66.32 Aligned_cols=98 Identities=11% Similarity=0.085 Sum_probs=51.4
Q ss_pred eeEEeccccccchhhhcc--CCCeEEEEeccCCCC-chh-HHH---H----hhccccc--ccccCCCCCC-CCCccchhh
Q 039518 469 RNAMDMNAYCGGFAVALN--SLPVWVMNIVPISMK-NTL-SAI---Y----NRGILGA--FHDWCEPFST-YPRTYDLLH 534 (617)
Q Consensus 469 Rn~mDm~~~~g~faa~l~--~~~v~vmnv~p~~~~-~~l-~~~---~----~RGlig~--~~~~~~~f~t-yprtyDl~H 534 (617)
..|||+|||.|.++.+|. ....-|.-| |.. ..+ .++ - ++|+-.+ .+.=.+.++. +...+|.++
T Consensus 26 ~~vLDiGCG~G~~~~~la~~~~~~~v~Gv---D~s~~~ml~~A~~A~~~~~~~~~~~v~~~~~d~~~l~~~~~d~v~~i~ 102 (225)
T 3p2e_A 26 RVHIDLGTGDGRNIYKLAINDQNTFYIGI---DPVKENLFDISKKIIKKPSKGGLSNVVFVIAAAESLPFELKNIADSIS 102 (225)
T ss_dssp EEEEEETCTTSHHHHHHHHTCTTEEEEEE---CSCCGGGHHHHHHHTSCGGGTCCSSEEEECCBTTBCCGGGTTCEEEEE
T ss_pred CEEEEEeccCcHHHHHHHHhCCCCEEEEE---eCCHHHHHHHHHHHHHHHHHcCCCCeEEEEcCHHHhhhhccCeEEEEE
Confidence 689999999999999987 444434433 333 332 222 2 3454322 1111122321 113344444
Q ss_pred ccccccccccCCCCCChhhHHhhhhhcccCCceEEE
Q 039518 535 ANHLFSHYKNRGEVCSLEDIMLEMDLIIRPQGFIII 570 (617)
Q Consensus 535 ~~~~~s~~~~~~~~c~~~~~l~e~dRilRP~G~~i~ 570 (617)
....+... ....+-....+|-|+-|+|||||.+++
T Consensus 103 ~~~~~~~~-~~~~~~~~~~~l~~~~r~LkpGG~l~i 137 (225)
T 3p2e_A 103 ILFPWGTL-LEYVIKPNRDILSNVADLAKKEAHFEF 137 (225)
T ss_dssp EESCCHHH-HHHHHTTCHHHHHHHHTTEEEEEEEEE
T ss_pred EeCCCcHH-hhhhhcchHHHHHHHHHhcCCCcEEEE
Confidence 32111100 000011224679999999999999999
No 452
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=96.63 E-value=0.0017 Score=66.36 Aligned_cols=95 Identities=9% Similarity=0.076 Sum_probs=53.5
Q ss_pred eeEEeccccccchhhhccCC-CeEEEEeccCCC--C-chhHH-HHhhccccc--ccccCCCCCCCCCccchhhccccccc
Q 039518 469 RNAMDMNAYCGGFAVALNSL-PVWVMNIVPISM--K-NTLSA-IYNRGILGA--FHDWCEPFSTYPRTYDLLHANHLFSH 541 (617)
Q Consensus 469 Rn~mDm~~~~g~faa~l~~~-~v~vmnv~p~~~--~-~~l~~-~~~RGlig~--~~~~~~~f~typrtyDl~H~~~~~s~ 541 (617)
..|||+|||.|+|+..|... .|.-+-+-|... . +.+.. .+.-++.-+ -.|-. .++ +.+||+|-++..+.
T Consensus 84 ~~VLDlGcGtG~~s~~la~~~~V~gVD~s~m~~~a~~~~~~~~~~~~~v~~~~~~~D~~-~l~--~~~fD~Vvsd~~~~- 159 (276)
T 2wa2_A 84 GTVVDLGCGRGSWSYYAASQPNVREVKAYTLGTSGHEKPRLVETFGWNLITFKSKVDVT-KME--PFQADTVLCDIGES- 159 (276)
T ss_dssp EEEEEESCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCCCCCTTGGGEEEECSCCGG-GCC--CCCCSEEEECCCCC-
T ss_pred CEEEEeccCCCHHHHHHHHcCCEEEEECchhhhhhhhchhhhhhcCCCeEEEeccCcHh-hCC--CCCcCEEEECCCcC-
Confidence 68999999999998888664 566666655310 0 00000 000011111 11221 234 58999998765422
Q ss_pred cccCCCCCChh-----hHHhhhhhcccCCc--eEEEe
Q 039518 542 YKNRGEVCSLE-----DIMLEMDLIIRPQG--FIIIR 571 (617)
Q Consensus 542 ~~~~~~~c~~~-----~~l~e~dRilRP~G--~~i~~ 571 (617)
...-.++ .+|-++.|+|+||| .+++.
T Consensus 160 ----~~~~~~d~~~~l~~L~~~~r~LkpGG~~~~v~~ 192 (276)
T 2wa2_A 160 ----NPTAAVEASRTLTVLNVISRWLEYNQGCGFCVK 192 (276)
T ss_dssp ----CSCHHHHHHHHHHHHHHHHHHHHHSTTCEEEEE
T ss_pred ----CCchhhhHHHHHHHHHHHHHHhccCCCcEEEEE
Confidence 1100011 26788999999999 88885
No 453
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=96.61 E-value=0.0024 Score=66.22 Aligned_cols=97 Identities=10% Similarity=0.151 Sum_probs=54.2
Q ss_pred hccCCCCCeeeEEeccccccchhhhccCC--C-eEEEEeccCCCC-chhHHHHhhc--------------c---cc-ccc
Q 039518 460 LMNVNETEIRNAMDMNAYCGGFAVALNSL--P-VWVMNIVPISMK-NTLSAIYNRG--------------I---LG-AFH 517 (617)
Q Consensus 460 ~~~~~~~~~Rn~mDm~~~~g~faa~l~~~--~-v~vmnv~p~~~~-~~l~~~~~RG--------------l---ig-~~~ 517 (617)
.+.+..+ .+|||+|||.|.++.+|... + .-|..+ |-. ..+..+-++. + +- ...
T Consensus 100 ~l~~~~g--~~VLDiG~G~G~~~~~la~~~g~~~~v~~v---D~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~~ 174 (336)
T 2b25_A 100 MMDINPG--DTVLEAGSGSGGMSLFLSKAVGSQGRVISF---EVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHK 174 (336)
T ss_dssp HHTCCTT--CEEEEECCTTSHHHHHHHHHHCTTCEEEEE---ESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEES
T ss_pred hcCCCCC--CEEEEeCCCcCHHHHHHHHHhCCCceEEEE---eCCHHHHHHHHHHHHHhhcccccccccccCCceEEEEC
Confidence 3445555 48999999999999888642 2 223322 222 3333333321 1 11 223
Q ss_pred ccCCCCCCCC-CccchhhccccccccccCCCCCChhhHHhhhhhcccCCceEEEec
Q 039518 518 DWCEPFSTYP-RTYDLLHANHLFSHYKNRGEVCSLEDIMLEMDLIIRPQGFIIIRD 572 (617)
Q Consensus 518 ~~~~~f~typ-rtyDl~H~~~~~s~~~~~~~~c~~~~~l~e~dRilRP~G~~i~~d 572 (617)
|..+....+| .+||+|.++. .. ...++-++-|+|+|||.+++..
T Consensus 175 d~~~~~~~~~~~~fD~V~~~~-~~----------~~~~l~~~~~~LkpgG~lv~~~ 219 (336)
T 2b25_A 175 DISGATEDIKSLTFDAVALDM-LN----------PHVTLPVFYPHLKHGGVCAVYV 219 (336)
T ss_dssp CTTCCC-------EEEEEECS-SS----------TTTTHHHHGGGEEEEEEEEEEE
T ss_pred ChHHcccccCCCCeeEEEECC-CC----------HHHHHHHHHHhcCCCcEEEEEe
Confidence 4444322233 5899998532 12 1237889999999999999864
No 454
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=96.61 E-value=0.00092 Score=65.71 Aligned_cols=125 Identities=14% Similarity=0.257 Sum_probs=73.1
Q ss_pred eeEEeccccccchhhhccCC-----CeEEEEeccCCCCchhHHHHhh----cccc---cc-c----------------cc
Q 039518 469 RNAMDMNAYCGGFAVALNSL-----PVWVMNIVPISMKNTLSAIYNR----GILG---AF-H----------------DW 519 (617)
Q Consensus 469 Rn~mDm~~~~g~faa~l~~~-----~v~vmnv~p~~~~~~l~~~~~R----Glig---~~-~----------------~~ 519 (617)
.+|||+|||.|.++..|... .|..+-+-| ..+..+-++ |+-. +. . .|
T Consensus 62 ~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~----~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~~~~~~~~ 137 (239)
T 2hnk_A 62 KRIIEIGTFTGYSSLCFASALPEDGKILCCDVSE----EWTNVARKYWKENGLENKIFLKLGSALETLQVLIDSKSAPSW 137 (239)
T ss_dssp SEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCH----HHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHCSSCCGG
T ss_pred CEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCH----HHHHHHHHHHHHcCCCCCEEEEECCHHHHHHHHHhhcccccc
Confidence 58999999999999888543 233332211 333333332 4321 11 1 12
Q ss_pred CCCCCCCC-CccchhhccccccccccCCCCCChhhHHhhhhhcccCCceEEEecC------------hHHHHHH----Hh
Q 039518 520 CEPFSTYP-RTYDLLHANHLFSHYKNRGEVCSLEDIMLEMDLIIRPQGFIIIRDE------------KSLITRI----RD 582 (617)
Q Consensus 520 ~~~f~typ-rtyDl~H~~~~~s~~~~~~~~c~~~~~l~e~dRilRP~G~~i~~d~------------~~~~~~~----~~ 582 (617)
-..|++ + .+||+|.++.... ....++-++-|+|||||.+++.+- ......+ +.
T Consensus 138 ~~~f~~-~~~~fD~I~~~~~~~---------~~~~~l~~~~~~L~pgG~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 207 (239)
T 2hnk_A 138 ASDFAF-GPSSIDLFFLDADKE---------NYPNYYPLILKLLKPGGLLIADNVLWDGSVADLSHQEPSTVGIRKFNEL 207 (239)
T ss_dssp GTTTCC-STTCEEEEEECSCGG---------GHHHHHHHHHHHEEEEEEEEEECSSGGGGGGCTTCCCHHHHHHHHHHHH
T ss_pred cccccC-CCCCcCEEEEeCCHH---------HHHHHHHHHHHHcCCCeEEEEEccccCCcccCccccchHHHHHHHHHHH
Confidence 222332 2 6899998654333 234778899999999999999751 1222233 33
Q ss_pred hhhcCCceEEEeeccccCCCceeEEEEEecc
Q 039518 583 LAPKFLWDVELHSLENREKKMESVLICRKKF 613 (617)
Q Consensus 583 ~~~~~~W~~~~~~~e~~~~~~~~~l~~~k~~ 613 (617)
+...-++++...... +.+.+++|+.
T Consensus 208 ~~~~~~~~~~~~p~~------~g~~~~~~~~ 232 (239)
T 2hnk_A 208 VYNDSLVDVSLVPIA------DGVSLVRKRL 232 (239)
T ss_dssp HHHCTTEEEEEECST------TCEEEEEECC
T ss_pred HhhCCCeEEEEEEcC------CceEeeeehh
Confidence 445566777766432 4588888875
No 455
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=96.60 E-value=0.00071 Score=64.96 Aligned_cols=99 Identities=10% Similarity=0.088 Sum_probs=60.9
Q ss_pred HHHHhccCCCCCeeeEEeccccccchhhhccCC-----CeEEEEeccCCCC-chhHHHHhh----cccc---cccccCCC
Q 039518 456 HYWQLMNVNETEIRNAMDMNAYCGGFAVALNSL-----PVWVMNIVPISMK-NTLSAIYNR----GILG---AFHDWCEP 522 (617)
Q Consensus 456 ~y~~~~~~~~~~~Rn~mDm~~~~g~faa~l~~~-----~v~vmnv~p~~~~-~~l~~~~~R----Glig---~~~~~~~~ 522 (617)
...+.+.+..+ .+|||+|||.|.+++.|... .|..+ |.. ..+..+-++ |+-. ...|..+.
T Consensus 68 ~~~~~~~~~~~--~~vLdiG~G~G~~~~~l~~~~~~~~~v~~v-----D~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~ 140 (215)
T 2yxe_A 68 MMCELLDLKPG--MKVLEIGTGCGYHAAVTAEIVGEDGLVVSI-----ERIPELAEKAERTLRKLGYDNVIVIVGDGTLG 140 (215)
T ss_dssp HHHHHTTCCTT--CEEEEECCTTSHHHHHHHHHHCTTSEEEEE-----ESCHHHHHHHHHHHHHHTCTTEEEEESCGGGC
T ss_pred HHHHhhCCCCC--CEEEEECCCccHHHHHHHHHhCCCCEEEEE-----eCCHHHHHHHHHHHHHcCCCCeEEEECCcccC
Confidence 33444445554 48999999999999888542 23333 322 444444443 3211 12233333
Q ss_pred CCCCCCccchhhccccccccccCCCCCChhhHHhhhhhcccCCceEEEecCh
Q 039518 523 FSTYPRTYDLLHANHLFSHYKNRGEVCSLEDIMLEMDLIIRPQGFIIIRDEK 574 (617)
Q Consensus 523 f~typrtyDl~H~~~~~s~~~~~~~~c~~~~~l~e~dRilRP~G~~i~~d~~ 574 (617)
++ -+.+||+|.+...+.+. .-++-|+|+|||.+++.-..
T Consensus 141 ~~-~~~~fD~v~~~~~~~~~------------~~~~~~~L~pgG~lv~~~~~ 179 (215)
T 2yxe_A 141 YE-PLAPYDRIYTTAAGPKI------------PEPLIRQLKDGGKLLMPVGR 179 (215)
T ss_dssp CG-GGCCEEEEEESSBBSSC------------CHHHHHTEEEEEEEEEEESS
T ss_pred CC-CCCCeeEEEECCchHHH------------HHHHHHHcCCCcEEEEEECC
Confidence 32 13689999988877643 23888999999999997443
No 456
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=96.60 E-value=0.001 Score=65.37 Aligned_cols=127 Identities=13% Similarity=0.100 Sum_probs=71.3
Q ss_pred eEEeccccccchhhhccC---CCeEEEEeccCCCCchhHHH---H-hhccc-c---cc-cccCCCCCCC-CCccchhhcc
Q 039518 470 NAMDMNAYCGGFAVALNS---LPVWVMNIVPISMKNTLSAI---Y-NRGIL-G---AF-HDWCEPFSTY-PRTYDLLHAN 536 (617)
Q Consensus 470 n~mDm~~~~g~faa~l~~---~~v~vmnv~p~~~~~~l~~~---~-~RGli-g---~~-~~~~~~f~ty-prtyDl~H~~ 536 (617)
+|||+|||.|.++.+|.. ..--|..|=... ..+.++ + +.|+- . +. .|-.+..+.. +.+||+|-++
T Consensus 59 ~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~--~~~~~a~~~~~~~g~~~~~i~~~~gda~~~l~~~~~~~fD~V~~d 136 (221)
T 3dr5_A 59 GAIAITPAAGLVGLYILNGLADNTTLTCIDPES--EHQRQAKALFREAGYSPSRVRFLLSRPLDVMSRLANDSYQLVFGQ 136 (221)
T ss_dssp EEEEESTTHHHHHHHHHHHSCTTSEEEEECSCH--HHHHHHHHHHHHTTCCGGGEEEECSCHHHHGGGSCTTCEEEEEEC
T ss_pred CEEEEcCCchHHHHHHHHhCCCCCEEEEEECCH--HHHHHHHHHHHHcCCCcCcEEEEEcCHHHHHHHhcCCCcCeEEEc
Confidence 899999999998887754 122232222211 233232 2 22432 1 11 1122222334 4789999755
Q ss_pred ccccccccCCCCCChhhHHhhhhhcccCCceEEEecC------------hHHHHHHHhhhhcCCce----EEEeeccccC
Q 039518 537 HLFSHYKNRGEVCSLEDIMLEMDLIIRPQGFIIIRDE------------KSLITRIRDLAPKFLWD----VELHSLENRE 600 (617)
Q Consensus 537 ~~~s~~~~~~~~c~~~~~l~e~dRilRP~G~~i~~d~------------~~~~~~~~~~~~~~~W~----~~~~~~e~~~ 600 (617)
.-.. ....++-++-|+|||||.+++.|- ......++++.+.+++. +.+..
T Consensus 137 ~~~~---------~~~~~l~~~~~~LkpGG~lv~dn~~~~g~v~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lp----- 202 (221)
T 3dr5_A 137 VSPM---------DLKALVDAAWPLLRRGGALVLADALLDGTIADQTRKDRDTQAARDADEYIRSIEGAHVARLP----- 202 (221)
T ss_dssp CCTT---------THHHHHHHHHHHEEEEEEEEETTTTGGGTCSCSSCCCHHHHHHHHHHHHHTTCTTEEEEEES-----
T ss_pred CcHH---------HHHHHHHHHHHHcCCCcEEEEeCCCCCCcCCCCCCCChHHHHHHHHHHHHhhCCCeeEEEee-----
Confidence 4333 234678889999999999998532 12223445555555444 44432
Q ss_pred CCceeEEEEEecc
Q 039518 601 KKMESVLICRKKF 613 (617)
Q Consensus 601 ~~~~~~l~~~k~~ 613 (617)
..+.+++++|.+
T Consensus 203 -~gdGl~~~~~~~ 214 (221)
T 3dr5_A 203 -LGAGLTVVTKAL 214 (221)
T ss_dssp -STTCEEEEEECC
T ss_pred -ccchHHHHHHHH
Confidence 246789998875
No 457
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=96.58 E-value=0.00064 Score=65.39 Aligned_cols=126 Identities=10% Similarity=0.108 Sum_probs=69.9
Q ss_pred eeEEeccccccchhhhccCCCeEEEEeccCCCC-chhHHHHhh----cc----cccc-cccCCCCCCC-CCc-cchhhcc
Q 039518 469 RNAMDMNAYCGGFAVALNSLPVWVMNIVPISMK-NTLSAIYNR----GI----LGAF-HDWCEPFSTY-PRT-YDLLHAN 536 (617)
Q Consensus 469 Rn~mDm~~~~g~faa~l~~~~v~vmnv~p~~~~-~~l~~~~~R----Gl----ig~~-~~~~~~f~ty-prt-yDl~H~~ 536 (617)
..|||+|||.|.++..+..... -.|+-.|.. ..+..+-++ |+ +-++ .|..+..+.. +.+ ||+|-++
T Consensus 55 ~~vLDlGcGtG~~~~~~~~~~~--~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~~~ 132 (201)
T 2ift_A 55 SECLDGFAGSGSLGFEALSRQA--KKVTFLELDKTVANQLKKNLQTLKCSSEQAEVINQSSLDFLKQPQNQPHFDVVFLD 132 (201)
T ss_dssp CEEEETTCTTCHHHHHHHHTTC--SEEEEECSCHHHHHHHHHHHHHTTCCTTTEEEECSCHHHHTTSCCSSCCEEEEEEC
T ss_pred CeEEEcCCccCHHHHHHHHccC--CEEEEEECCHHHHHHHHHHHHHhCCCccceEEEECCHHHHHHhhccCCCCCEEEEC
Confidence 4799999999999887554432 123333444 444444332 33 1111 2222222222 368 9999877
Q ss_pred ccccccccCCCCCChhhHHhhh--hhcccCCceEEEecChHHHHHHHhhhhcCCceEEEeeccccCCCceeEEEEEec
Q 039518 537 HLFSHYKNRGEVCSLEDIMLEM--DLIIRPQGFIIIRDEKSLITRIRDLAPKFLWDVELHSLENREKKMESVLICRKK 612 (617)
Q Consensus 537 ~~~s~~~~~~~~c~~~~~l~e~--dRilRP~G~~i~~d~~~~~~~~~~~~~~~~W~~~~~~~e~~~~~~~~~l~~~k~ 612 (617)
..|. . -....++-++ -|+|+|||.+++...... +.+. .-.|..... ...+...+.+.+|.
T Consensus 133 ~~~~-----~--~~~~~~l~~~~~~~~LkpgG~l~i~~~~~~---~~~~--~~~~~~~~~----~~yG~~~~~~~~~~ 194 (201)
T 2ift_A 133 PPFH-----F--NLAEQAISLLCENNWLKPNALIYVETEKDK---PLIT--PENWTLLKE----KTTGIVSYRLYQNL 194 (201)
T ss_dssp CCSS-----S--CHHHHHHHHHHHTTCEEEEEEEEEEEESSS---CCCC--CTTEEEEEE----EEETTEEEEEEEEC
T ss_pred CCCC-----C--ccHHHHHHHHHhcCccCCCcEEEEEECCCC---Cccc--cchhHHHHH----HhcCCEEEEEEecc
Confidence 6643 1 1245677777 789999999999865543 1111 124654332 12334667776654
No 458
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=96.57 E-value=0.0055 Score=71.29 Aligned_cols=113 Identities=11% Similarity=0.164 Sum_probs=68.6
Q ss_pred HHHHHHHHHHhccCCCCCeeeEEeccccccchhhhccCCC---eEEEEeccCCCC-chhHHHHhh----------cc--c
Q 039518 450 WQDQVRHYWQLMNVNETEIRNAMDMNAYCGGFAVALNSLP---VWVMNIVPISMK-NTLSAIYNR----------GI--L 513 (617)
Q Consensus 450 w~~~v~~y~~~~~~~~~~~Rn~mDm~~~~g~faa~l~~~~---v~vmnv~p~~~~-~~l~~~~~R----------Gl--i 513 (617)
...+++...+.+....+ ..|||+|||.|.++.+|.... .-|.-| |-. ..+..+-+| |+ |
T Consensus 706 ~eqRle~LLelL~~~~g--~rVLDVGCGTG~lai~LAr~g~p~a~VtGV---DIS~emLe~AReRLa~~lnAkr~gl~nV 780 (950)
T 3htx_A 706 SKQRVEYALKHIRESSA--STLVDFGCGSGSLLDSLLDYPTSLQTIIGV---DISPKGLARAAKMLHVKLNKEACNVKSA 780 (950)
T ss_dssp HHHHHHHHHHHHHHSCC--SEEEEETCSSSHHHHHHTSSCCCCCEEEEE---ESCHHHHHHHHHHHHHHTTTTCSSCSEE
T ss_pred HHHHHHHHHHHhcccCC--CEEEEECCCCCHHHHHHHHhCCCCCeEEEE---ECCHHHHHHHHHHhhhccchhhcCCCce
Confidence 34444444444433333 579999999999999998764 233333 333 455555441 43 2
Q ss_pred ccccccCCCCCCCCCccchhhccccccccccCCCCCChhhHHhhhhhcccCCceEEEec
Q 039518 514 GAFHDWCEPFSTYPRTYDLLHANHLFSHYKNRGEVCSLEDIMLEMDLIIRPQGFIIIRD 572 (617)
Q Consensus 514 g~~~~~~~~f~typrtyDl~H~~~~~s~~~~~~~~c~~~~~l~e~dRilRP~G~~i~~d 572 (617)
-+++.=-+.++.-..+||+|.+..++.++ .+ =....++-|+-|+|||| .+|+..
T Consensus 781 efiqGDa~dLp~~d~sFDlVV~~eVLeHL---~d-p~l~~~L~eI~RvLKPG-~LIIST 834 (950)
T 3htx_A 781 TLYDGSILEFDSRLHDVDIGTCLEVIEHM---EE-DQACEFGEKVLSLFHPK-LLIVST 834 (950)
T ss_dssp EEEESCTTSCCTTSCSCCEEEEESCGGGS---CH-HHHHHHHHHHHHTTCCS-EEEEEE
T ss_pred EEEECchHhCCcccCCeeEEEEeCchhhC---Ch-HHHHHHHHHHHHHcCCC-EEEEEe
Confidence 22221122244444899999999999875 21 11234788999999999 777753
No 459
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=96.57 E-value=0.00012 Score=71.92 Aligned_cols=93 Identities=15% Similarity=0.206 Sum_probs=58.5
Q ss_pred eeEEeccccccchhhhccCCCeEEEEeccCCCC-chhHHHHh----hcc---ccc-ccccCCCCCCCCCccchhhccccc
Q 039518 469 RNAMDMNAYCGGFAVALNSLPVWVMNIVPISMK-NTLSAIYN----RGI---LGA-FHDWCEPFSTYPRTYDLLHANHLF 539 (617)
Q Consensus 469 Rn~mDm~~~~g~faa~l~~~~v~vmnv~p~~~~-~~l~~~~~----RGl---ig~-~~~~~~~f~typrtyDl~H~~~~~ 539 (617)
.+|||+|||.|+++.+|..... .|+-.|-. ..+..+-+ .|+ +-+ ..|..+. + -+.+||+|.++..|
T Consensus 80 ~~vLD~gcG~G~~~~~la~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~-~-~~~~~D~v~~~~~~ 154 (241)
T 3gdh_A 80 DVVVDAFCGVGGNTIQFALTGM---RVIAIDIDPVKIALARNNAEVYGIADKIEFICGDFLLL-A-SFLKADVVFLSPPW 154 (241)
T ss_dssp SEEEETTCTTSHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHH-G-GGCCCSEEEECCCC
T ss_pred CEEEECccccCHHHHHHHHcCC---EEEEEECCHHHHHHHHHHHHHcCCCcCeEEEECChHHh-c-ccCCCCEEEECCCc
Confidence 5799999999999999987653 33333433 34433332 233 111 1232221 2 13799999988877
Q ss_pred cccccCCCCCChhhHHhhhhhcccCCceEEEec
Q 039518 540 SHYKNRGEVCSLEDIMLEMDLIIRPQGFIIIRD 572 (617)
Q Consensus 540 s~~~~~~~~c~~~~~l~e~dRilRP~G~~i~~d 572 (617)
.... .....+.|+-|+|+|||.+|+..
T Consensus 155 ~~~~------~~~~~~~~~~~~L~pgG~~i~~~ 181 (241)
T 3gdh_A 155 GGPD------YATAETFDIRTMMSPDGFEIFRL 181 (241)
T ss_dssp SSGG------GGGSSSBCTTTSCSSCHHHHHHH
T ss_pred CCcc------hhhhHHHHHHhhcCCcceeHHHH
Confidence 7431 11236779999999999988764
No 460
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=96.54 E-value=0.0024 Score=60.09 Aligned_cols=98 Identities=14% Similarity=0.136 Sum_probs=54.5
Q ss_pred CCCCCeeeEEeccccccchhhhccCC-------------CeEEEEeccCCCCchhHHHHhhcccccccccCCC-C-----
Q 039518 463 VNETEIRNAMDMNAYCGGFAVALNSL-------------PVWVMNIVPISMKNTLSAIYNRGILGAFHDWCEP-F----- 523 (617)
Q Consensus 463 ~~~~~~Rn~mDm~~~~g~faa~l~~~-------------~v~vmnv~p~~~~~~l~~~~~RGlig~~~~~~~~-f----- 523 (617)
+..+ .+|||+|||.|.++.+|... .|+.+-+.|....+.+.++ . -.|..+. +
T Consensus 20 ~~~~--~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~~~~~~~~~-~------~~d~~~~~~~~~~~ 90 (196)
T 2nyu_A 20 LRPG--LRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIFPLEGATFL-C------PADVTDPRTSQRIL 90 (196)
T ss_dssp CCTT--CEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCCCCTTCEEE-C------SCCTTSHHHHHHHH
T ss_pred CCCC--CEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhcccCCCCeEE-E------eccCCCHHHHHHHH
Confidence 4444 58999999999999888543 2455444442211111000 0 1111110 0
Q ss_pred CCCC-CccchhhccccccccccCCCC--------CChhhHHhhhhhcccCCceEEEec
Q 039518 524 STYP-RTYDLLHANHLFSHYKNRGEV--------CSLEDIMLEMDLIIRPQGFIIIRD 572 (617)
Q Consensus 524 ~typ-rtyDl~H~~~~~s~~~~~~~~--------c~~~~~l~e~dRilRP~G~~i~~d 572 (617)
..+| .+||+|-++..+... ... .....+|-|+-|+|||||.+++.+
T Consensus 91 ~~~~~~~fD~V~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~ 145 (196)
T 2nyu_A 91 EVLPGRRADVILSDMAPNAT---GFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKT 145 (196)
T ss_dssp HHSGGGCEEEEEECCCCCCC---SCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred HhcCCCCCcEEEeCCCCCCC---CCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEe
Confidence 0023 689999876543310 000 011367889999999999999973
No 461
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=96.46 E-value=0.001 Score=65.28 Aligned_cols=98 Identities=14% Similarity=0.189 Sum_probs=58.8
Q ss_pred HHHhccCCCCCeeeEEeccccccchhhhccC---CCeEEEEeccCCCCchhHHHHhh----cccc---cccccCCCCCCC
Q 039518 457 YWQLMNVNETEIRNAMDMNAYCGGFAVALNS---LPVWVMNIVPISMKNTLSAIYNR----GILG---AFHDWCEPFSTY 526 (617)
Q Consensus 457 y~~~~~~~~~~~Rn~mDm~~~~g~faa~l~~---~~v~vmnv~p~~~~~~l~~~~~R----Glig---~~~~~~~~f~ty 526 (617)
..+.+.+..+ .+|||+|||.|.+++.|.. ..|..+-+.| ..+..+-++ |+-. ...|..++++.
T Consensus 83 ~~~~l~~~~~--~~vLdiG~G~G~~~~~la~~~~~~v~~vD~~~----~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~- 155 (235)
T 1jg1_A 83 MLEIANLKPG--MNILEVGTGSGWNAALISEIVKTDVYTIERIP----ELVEFAKRNLERAGVKNVHVILGDGSKGFPP- 155 (235)
T ss_dssp HHHHHTCCTT--CCEEEECCTTSHHHHHHHHHHCSCEEEEESCH----HHHHHHHHHHHHTTCCSEEEEESCGGGCCGG-
T ss_pred HHHhcCCCCC--CEEEEEeCCcCHHHHHHHHHhCCEEEEEeCCH----HHHHHHHHHHHHcCCCCcEEEECCcccCCCC-
Confidence 3444445554 4899999999999998865 3444443222 344444333 3311 12233233331
Q ss_pred CCccchhhccccccccccCCCCCChhhHHhhhhhcccCCceEEEecC
Q 039518 527 PRTYDLLHANHLFSHYKNRGEVCSLEDIMLEMDLIIRPQGFIIIRDE 573 (617)
Q Consensus 527 prtyDl~H~~~~~s~~~~~~~~c~~~~~l~e~dRilRP~G~~i~~d~ 573 (617)
...||+|.++..+..+ .-++-|+|+|||.+++.-.
T Consensus 156 ~~~fD~Ii~~~~~~~~------------~~~~~~~L~pgG~lvi~~~ 190 (235)
T 1jg1_A 156 KAPYDVIIVTAGAPKI------------PEPLIEQLKIGGKLIIPVG 190 (235)
T ss_dssp GCCEEEEEECSBBSSC------------CHHHHHTEEEEEEEEEEEC
T ss_pred CCCccEEEECCcHHHH------------HHHHHHhcCCCcEEEEEEe
Confidence 1249999977776633 3378899999999999743
No 462
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=96.42 E-value=0.0017 Score=68.66 Aligned_cols=95 Identities=11% Similarity=0.188 Sum_probs=61.0
Q ss_pred CCCeeeEEeccccccchhhhccC--CC--eEEEEeccCCCCchhHHHHhh-cccccccccCCCCCCCCCccchhhccccc
Q 039518 465 ETEIRNAMDMNAYCGGFAVALNS--LP--VWVMNIVPISMKNTLSAIYNR-GILGAFHDWCEPFSTYPRTYDLLHANHLF 539 (617)
Q Consensus 465 ~~~~Rn~mDm~~~~g~faa~l~~--~~--v~vmnv~p~~~~~~l~~~~~R-Glig~~~~~~~~f~typrtyDl~H~~~~~ 539 (617)
....+.|+|+|||.|.++.+|.+ .. +.+.-+ | ..+..+-++ ++-=+-+|.-+++ |.. |+|.+..++
T Consensus 201 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~----~~~~~a~~~~~v~~~~~d~~~~~---p~~-D~v~~~~vl 271 (368)
T 3reo_A 201 FEGLTTIVDVGGGTGAVASMIVAKYPSINAINFDL-P----HVIQDAPAFSGVEHLGGDMFDGV---PKG-DAIFIKWIC 271 (368)
T ss_dssp TTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-H----HHHTTCCCCTTEEEEECCTTTCC---CCC-SEEEEESCG
T ss_pred ccCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeh-H----HHHHhhhhcCCCEEEecCCCCCC---CCC-CEEEEechh
Confidence 45678999999999999999864 22 333332 1 111111111 2222334554544 444 999998888
Q ss_pred cccccCCCCCChhhHHhhhhhcccCCceEEEec
Q 039518 540 SHYKNRGEVCSLEDIMLEMDLIIRPQGFIIIRD 572 (617)
Q Consensus 540 s~~~~~~~~c~~~~~l~e~dRilRP~G~~i~~d 572 (617)
-+| .+. ....+|-++=|.|+|||.++|.|
T Consensus 272 h~~---~~~-~~~~~l~~~~~~L~pgG~l~i~e 300 (368)
T 3reo_A 272 HDW---SDE-HCLKLLKNCYAALPDHGKVIVAE 300 (368)
T ss_dssp GGB---CHH-HHHHHHHHHHHHSCTTCEEEEEE
T ss_pred hcC---CHH-HHHHHHHHHHHHcCCCCEEEEEE
Confidence 776 211 23468999999999999999964
No 463
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=96.42 E-value=0.0013 Score=69.26 Aligned_cols=97 Identities=14% Similarity=0.161 Sum_probs=61.3
Q ss_pred CCCeeeEEeccccccchhhhccCC--CeEEEEeccCCCCchhHHHHh-hcccccccccCCCCCCCCCccchhhccccccc
Q 039518 465 ETEIRNAMDMNAYCGGFAVALNSL--PVWVMNIVPISMKNTLSAIYN-RGILGAFHDWCEPFSTYPRTYDLLHANHLFSH 541 (617)
Q Consensus 465 ~~~~Rn~mDm~~~~g~faa~l~~~--~v~vmnv~p~~~~~~l~~~~~-RGlig~~~~~~~~f~typrtyDl~H~~~~~s~ 541 (617)
.....+|||+|||.|.++.+|.+. .+-+..+ |-+..+..+-+ .++--+-+|..+++ |. ||+|.+.+++-+
T Consensus 207 ~~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~---D~~~~~~~a~~~~~v~~~~~d~~~~~---~~-~D~v~~~~~lh~ 279 (372)
T 1fp1_D 207 FEGISTLVDVGGGSGRNLELIISKYPLIKGINF---DLPQVIENAPPLSGIEHVGGDMFASV---PQ-GDAMILKAVCHN 279 (372)
T ss_dssp TTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEE---ECHHHHTTCCCCTTEEEEECCTTTCC---CC-EEEEEEESSGGG
T ss_pred cCCCCEEEEeCCCCcHHHHHHHHHCCCCeEEEe---ChHHHHHhhhhcCCCEEEeCCcccCC---CC-CCEEEEeccccc
Confidence 345689999999999999998643 3322211 11111111111 12323344555543 45 999999998876
Q ss_pred cccCCCCCChhhHHhhhhhcccCCceEEEec
Q 039518 542 YKNRGEVCSLEDIMLEMDLIIRPQGFIIIRD 572 (617)
Q Consensus 542 ~~~~~~~c~~~~~l~e~dRilRP~G~~i~~d 572 (617)
| .+. ....+|-++=|+|+|||.++|.|
T Consensus 280 ~---~d~-~~~~~l~~~~~~L~pgG~l~i~e 306 (372)
T 1fp1_D 280 W---SDE-KCIEFLSNCHKALSPNGKVIIVE 306 (372)
T ss_dssp S---CHH-HHHHHHHHHHHHEEEEEEEEEEE
T ss_pred C---CHH-HHHHHHHHHHHhcCCCCEEEEEE
Confidence 6 211 12378999999999999999873
No 464
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=96.40 E-value=0.00037 Score=67.95 Aligned_cols=91 Identities=10% Similarity=0.092 Sum_probs=56.3
Q ss_pred CCCCCeeeEEeccccccchhhhccCC----------CeEEEEeccCCCCchhHHHHhh----c--------ccccccccC
Q 039518 463 VNETEIRNAMDMNAYCGGFAVALNSL----------PVWVMNIVPISMKNTLSAIYNR----G--------ILGAFHDWC 520 (617)
Q Consensus 463 ~~~~~~Rn~mDm~~~~g~faa~l~~~----------~v~vmnv~p~~~~~~l~~~~~R----G--------lig~~~~~~ 520 (617)
+..+ ..|||+|||.|.+++.|... .|..+-+.| ..+..+-++ | +--+..|..
T Consensus 82 ~~~~--~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~----~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~ 155 (227)
T 1r18_A 82 LKPG--ARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQA----ELVRRSKANLNTDDRSMLDSGQLLIVEGDGR 155 (227)
T ss_dssp CCTT--CEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCH----HHHHHHHHHHHHHHHHHHHHTSEEEEESCGG
T ss_pred CCCC--CEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCH----HHHHHHHHHHHhcCccccCCCceEEEECCcc
Confidence 4444 47999999999999888652 344433222 333333222 2 111223444
Q ss_pred CCCCCCCCccchhhccccccccccCCCCCChhhHHhhhhhcccCCceEEEec
Q 039518 521 EPFSTYPRTYDLLHANHLFSHYKNRGEVCSLEDIMLEMDLIIRPQGFIIIRD 572 (617)
Q Consensus 521 ~~f~typrtyDl~H~~~~~s~~~~~~~~c~~~~~l~e~dRilRP~G~~i~~d 572 (617)
+.++. ..+||+|++...+.. ++-++-|+|+|||.+++.-
T Consensus 156 ~~~~~-~~~fD~I~~~~~~~~------------~~~~~~~~LkpgG~lvi~~ 194 (227)
T 1r18_A 156 KGYPP-NAPYNAIHVGAAAPD------------TPTELINQLASGGRLIVPV 194 (227)
T ss_dssp GCCGG-GCSEEEEEECSCBSS------------CCHHHHHTEEEEEEEEEEE
T ss_pred cCCCc-CCCccEEEECCchHH------------HHHHHHHHhcCCCEEEEEE
Confidence 43332 268999997776653 4578889999999999973
No 465
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=96.40 E-value=0.0037 Score=62.47 Aligned_cols=109 Identities=9% Similarity=0.119 Sum_probs=64.2
Q ss_pred HHhccCCCCCeeeEEeccccccchhhhccCC---CeEEEEeccCCCC-chhHHHHhh-----c-ccc----cccccCCC-
Q 039518 458 WQLMNVNETEIRNAMDMNAYCGGFAVALNSL---PVWVMNIVPISMK-NTLSAIYNR-----G-ILG----AFHDWCEP- 522 (617)
Q Consensus 458 ~~~~~~~~~~~Rn~mDm~~~~g~faa~l~~~---~v~vmnv~p~~~~-~~l~~~~~R-----G-lig----~~~~~~~~- 522 (617)
...+.+..+ .+|||+|||.|.++.+|... ..-|. -.|-. ..+..+-++ | +.. +..|..+.
T Consensus 92 ~~~~~~~~~--~~vLdiG~G~G~~~~~l~~~~~~~~~v~---~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d~~~~~ 166 (280)
T 1i9g_A 92 VHEGDIFPG--ARVLEAGAGSGALTLSLLRAVGPAGQVI---SYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDLADSE 166 (280)
T ss_dssp HHHTTCCTT--CEEEEECCTTSHHHHHHHHHHCTTSEEE---EECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCGGGCC
T ss_pred HHHcCCCCC--CEEEEEcccccHHHHHHHHHhCCCCEEE---EEeCCHHHHHHHHHHHHHhcCCCCCcEEEEECchHhcC
Confidence 344445555 47999999999999988653 23222 23333 444444443 4 211 22333332
Q ss_pred CCCCCCccchhhccccccccccCCCCCChhhHHhhhhhcccCCceEEEecC-hHHHHHHHhhh
Q 039518 523 FSTYPRTYDLLHANHLFSHYKNRGEVCSLEDIMLEMDLIIRPQGFIIIRDE-KSLITRIRDLA 584 (617)
Q Consensus 523 f~typrtyDl~H~~~~~s~~~~~~~~c~~~~~l~e~dRilRP~G~~i~~d~-~~~~~~~~~~~ 584 (617)
++ +.+||+|-++. -....+|-++-|+|+|||.+++... .+.+.++.+.+
T Consensus 167 ~~--~~~~D~v~~~~-----------~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~l 216 (280)
T 1i9g_A 167 LP--DGSVDRAVLDM-----------LAPWEVLDAVSRLLVAGGVLMVYVATVTQLSRIVEAL 216 (280)
T ss_dssp CC--TTCEEEEEEES-----------SCGGGGHHHHHHHEEEEEEEEEEESSHHHHHHHHHHH
T ss_pred CC--CCceeEEEECC-----------cCHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHH
Confidence 22 37899987421 1234789999999999999999743 33344444333
No 466
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=96.40 E-value=0.0024 Score=66.89 Aligned_cols=118 Identities=12% Similarity=0.087 Sum_probs=67.4
Q ss_pred eeEEeccccccchhhhccCCCeEEEEeccCCCC-chhHHHHhh----ccc----cccc-ccCCCCCCC---CCccchhhc
Q 039518 469 RNAMDMNAYCGGFAVALNSLPVWVMNIVPISMK-NTLSAIYNR----GIL----GAFH-DWCEPFSTY---PRTYDLLHA 535 (617)
Q Consensus 469 Rn~mDm~~~~g~faa~l~~~~v~vmnv~p~~~~-~~l~~~~~R----Gli----g~~~-~~~~~f~ty---prtyDl~H~ 535 (617)
..|||+|||.|+|+.++..... .|+-+|.. ..+..+-++ |+- -+++ |..+..... ..+||+|=+
T Consensus 155 ~~VLDlgcGtG~~sl~la~~ga---~V~~VD~s~~al~~a~~n~~~~gl~~~~v~~i~~D~~~~l~~~~~~~~~fD~Ii~ 231 (332)
T 2igt_A 155 LKVLNLFGYTGVASLVAAAAGA---EVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDAMKFIQREERRGSTYDIILT 231 (332)
T ss_dssp CEEEEETCTTCHHHHHHHHTTC---EEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHHHHHHHHHHHTCCBSEEEE
T ss_pred CcEEEcccccCHHHHHHHHcCC---EEEEEECCHHHHHHHHHHHHHcCCCccceEEEECcHHHHHHHHHhcCCCceEEEE
Confidence 4799999999999988876654 44445554 444444332 331 1121 111111101 357999876
Q ss_pred ccc-ccccccCCCC------CChhhHHhhhhhcccCCceEEEe-------cChHHHHHHHhhhhcCCceEE
Q 039518 536 NHL-FSHYKNRGEV------CSLEDIMLEMDLIIRPQGFIIIR-------DEKSLITRIRDLAPKFLWDVE 592 (617)
Q Consensus 536 ~~~-~s~~~~~~~~------c~~~~~l~e~dRilRP~G~~i~~-------d~~~~~~~~~~~~~~~~W~~~ 592 (617)
+-- |..- ... =.+..++-++-|+|+|||++++. +...+.+-+++.++....++.
T Consensus 232 dPP~~~~~---~~~~~~~~~~~~~~ll~~~~~~LkpgG~lli~~~~~~~~~~~~~~~~l~~a~~~~g~~v~ 299 (332)
T 2igt_A 232 DPPKFGRG---THGEVWQLFDHLPLMLDICREILSPKALGLVLTAYSIRASFYSMHELMRETMRGAGGVVA 299 (332)
T ss_dssp CCCSEEEC---TTCCEEEHHHHHHHHHHHHHHTBCTTCCEEEEEECCTTSCHHHHHHHHHHHTTTSCSEEE
T ss_pred CCccccCC---chHHHHHHHHHHHHHHHHHHHhcCcCcEEEEEECCCCCCCHHHHHHHHHHHHHHcCCeEE
Confidence 432 2210 000 01347888999999999997774 223445555656666666654
No 467
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=96.38 E-value=0.0021 Score=62.17 Aligned_cols=125 Identities=14% Similarity=0.100 Sum_probs=71.2
Q ss_pred eeEEeccccccchhhhccCC---C--eEEEEeccCCCCchhHHHHh----hccc---ccc-cccCCCCCCCC-----Ccc
Q 039518 469 RNAMDMNAYCGGFAVALNSL---P--VWVMNIVPISMKNTLSAIYN----RGIL---GAF-HDWCEPFSTYP-----RTY 530 (617)
Q Consensus 469 Rn~mDm~~~~g~faa~l~~~---~--v~vmnv~p~~~~~~l~~~~~----RGli---g~~-~~~~~~f~typ-----rty 530 (617)
++|||+|||.|.++.+|... . |..+-+-| ..+..+-+ .|+- -+. .|..+.++..+ .+|
T Consensus 71 ~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~----~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~~~~~~~~~~ 146 (229)
T 2avd_A 71 KKALDLGTFTGYSALALALALPADGRVVTCEVDA----QPPELGRPLWRQAEAEHKIDLRLKPALETLDELLAAGEAGTF 146 (229)
T ss_dssp CEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCS----HHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCTTCE
T ss_pred CEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCH----HHHHHHHHHHHHCCCCCeEEEEEcCHHHHHHHHHhcCCCCCc
Confidence 58999999999999888653 2 33332211 33333333 2441 111 12211111121 679
Q ss_pred chhhccccccccccCCCCCChhhHHhhhhhcccCCceEEEecC------------hHHHHHHHh----hhhcCCceEEEe
Q 039518 531 DLLHANHLFSHYKNRGEVCSLEDIMLEMDLIIRPQGFIIIRDE------------KSLITRIRD----LAPKFLWDVELH 594 (617)
Q Consensus 531 Dl~H~~~~~s~~~~~~~~c~~~~~l~e~dRilRP~G~~i~~d~------------~~~~~~~~~----~~~~~~W~~~~~ 594 (617)
|+|.++.. .-....++-++=|+|||||.+++.+. ......+++ +...=++++.+.
T Consensus 147 D~v~~d~~---------~~~~~~~l~~~~~~L~pgG~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l 217 (229)
T 2avd_A 147 DVAVVDAD---------KENCSAYYERCLQLLRPGGILAVLRVLWRGKVLQPPKGDVAAECVRNLNERIRRDVRVYISLL 217 (229)
T ss_dssp EEEEECSC---------STTHHHHHHHHHHHEEEEEEEEEECCSGGGGGGSCCTTCHHHHHHHHHHHHHHHCTTEEEEEE
T ss_pred cEEEECCC---------HHHHHHHHHHHHHHcCCCeEEEEECCCcCCcccCcccCChHHHHHHHHHHHHhhCCCEEEEEE
Confidence 99885433 22345788899999999999999532 122233333 344456766665
Q ss_pred eccccCCCceeEEEEEec
Q 039518 595 SLENREKKMESVLICRKK 612 (617)
Q Consensus 595 ~~e~~~~~~~~~l~~~k~ 612 (617)
.. .+.+++++|.
T Consensus 218 p~------~dGl~~~~k~ 229 (229)
T 2avd_A 218 PL------GDGLTLAFKI 229 (229)
T ss_dssp CS------TTCEEEEEEC
T ss_pred ec------CCceEEEEEC
Confidence 43 3568888873
No 468
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=96.37 E-value=0.0019 Score=65.40 Aligned_cols=113 Identities=16% Similarity=0.155 Sum_probs=66.3
Q ss_pred CCCCCeeeEEeccccccchhhhccCC----CeEEEEeccCCCCchhHHHH----hhcc---cccccccCCCCCCCCCccc
Q 039518 463 VNETEIRNAMDMNAYCGGFAVALNSL----PVWVMNIVPISMKNTLSAIY----NRGI---LGAFHDWCEPFSTYPRTYD 531 (617)
Q Consensus 463 ~~~~~~Rn~mDm~~~~g~faa~l~~~----~v~vmnv~p~~~~~~l~~~~----~RGl---ig~~~~~~~~f~typrtyD 531 (617)
+..+ .+|||+|||.|+|+..|... .|..+-+.| ..+..+- ..|+ .-+..|..+. +. +.+||
T Consensus 117 ~~~~--~~VLDlgcG~G~~s~~la~~~~~~~V~~vD~s~----~av~~a~~n~~~n~l~~~~~~~~d~~~~-~~-~~~~D 188 (272)
T 3a27_A 117 SNEN--EVVVDMFAGIGYFTIPLAKYSKPKLVYAIEKNP----TAYHYLCENIKLNKLNNVIPILADNRDV-EL-KDVAD 188 (272)
T ss_dssp CCTT--CEEEETTCTTTTTHHHHHHHTCCSEEEEEECCH----HHHHHHHHHHHHTTCSSEEEEESCGGGC-CC-TTCEE
T ss_pred cCCC--CEEEEecCcCCHHHHHHHHhCCCCEEEEEeCCH----HHHHHHHHHHHHcCCCCEEEEECChHHc-Cc-cCCce
Confidence 4444 58999999999999888653 344433222 2332222 2233 2112222222 22 56899
Q ss_pred hhhccccccccccCCCCCChhhHHhhhhhcccCCceEEEecCh-------HHHHHHHhhhhcCCceEEE
Q 039518 532 LLHANHLFSHYKNRGEVCSLEDIMLEMDLIIRPQGFIIIRDEK-------SLITRIRDLAPKFLWDVEL 593 (617)
Q Consensus 532 l~H~~~~~s~~~~~~~~c~~~~~l~e~dRilRP~G~~i~~d~~-------~~~~~~~~~~~~~~W~~~~ 593 (617)
+|-++... ....++.++-|+|+|||.+++.+.. ...+.++.+.+.+.+++..
T Consensus 189 ~Vi~d~p~----------~~~~~l~~~~~~LkpgG~l~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (272)
T 3a27_A 189 RVIMGYVH----------KTHKFLDKTFEFLKDRGVIHYHETVAEKIMYERPIERLKFYAEKNGYKLID 247 (272)
T ss_dssp EEEECCCS----------SGGGGHHHHHHHEEEEEEEEEEEEEEGGGTTTHHHHHHHHHHHHTTEEEEE
T ss_pred EEEECCcc----------cHHHHHHHHHHHcCCCCEEEEEEcCccccccccHHHHHHHHHHHhCCeeEE
Confidence 98644332 4557889999999999999998443 2334455555555555543
No 469
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=96.30 E-value=0.0015 Score=64.56 Aligned_cols=127 Identities=9% Similarity=0.118 Sum_probs=71.5
Q ss_pred eeeEEeccccccchhhhccC-----CCeEEEEeccCCCCchhHHH----Hhhcccc---c-ccccCCCCCCC------CC
Q 039518 468 IRNAMDMNAYCGGFAVALNS-----LPVWVMNIVPISMKNTLSAI----YNRGILG---A-FHDWCEPFSTY------PR 528 (617)
Q Consensus 468 ~Rn~mDm~~~~g~faa~l~~-----~~v~vmnv~p~~~~~~l~~~----~~RGlig---~-~~~~~~~f~ty------pr 528 (617)
-++|||+|||.|..+.+|.. ..|..+-+-| ..+.++ -+.|+-. + ..|..+.++.. +.
T Consensus 71 ~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~----~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~ 146 (237)
T 3c3y_A 71 AKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDR----EAYEIGLPFIRKAGVEHKINFIESDAMLALDNLLQGQESEG 146 (237)
T ss_dssp CCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCH----HHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSTTCTT
T ss_pred CCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCH----HHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhccCCCC
Confidence 36899999999998877753 2233332211 333333 2235421 1 12333322222 47
Q ss_pred ccchhhccccccccccCCCCCChhhHHhhhhhcccCCceEEEecC-----------------hHHHHHHHh----hhhcC
Q 039518 529 TYDLLHANHLFSHYKNRGEVCSLEDIMLEMDLIIRPQGFIIIRDE-----------------KSLITRIRD----LAPKF 587 (617)
Q Consensus 529 tyDl~H~~~~~s~~~~~~~~c~~~~~l~e~dRilRP~G~~i~~d~-----------------~~~~~~~~~----~~~~~ 587 (617)
+||+|-.+.--. ....++-++-|+|||||.+++.+- ......|++ +...=
T Consensus 147 ~fD~I~~d~~~~---------~~~~~l~~~~~~L~pGG~lv~d~~~~~g~~~~~~~~~~~~~r~~~~~i~~~~~~l~~~~ 217 (237)
T 3c3y_A 147 SYDFGFVDADKP---------NYIKYHERLMKLVKVGGIVAYDNTLWGGTVAQPESEVPDFMKENREAVIELNKLLAADP 217 (237)
T ss_dssp CEEEEEECSCGG---------GHHHHHHHHHHHEEEEEEEEEECTTGGGGGGSCGGGSCGGGHHHHHHHHHHHHHHHHCT
T ss_pred CcCEEEECCchH---------HHHHHHHHHHHhcCCCeEEEEecCCcCCccCCCcccchhhHHHHHHHHHHHHHHHhcCC
Confidence 899997553222 235778888999999999999641 001233333 34445
Q ss_pred CceEEEeeccccCCCceeEEEEEecc
Q 039518 588 LWDVELHSLENREKKMESVLICRKKF 613 (617)
Q Consensus 588 ~W~~~~~~~e~~~~~~~~~l~~~k~~ 613 (617)
++.+.+... .+.+++++|.+
T Consensus 218 ~~~~~~lp~------~dG~~~~~~~~ 237 (237)
T 3c3y_A 218 RIEIVHLPL------GDGITFCRRLY 237 (237)
T ss_dssp TEEEEEECS------TTCEEEEEECC
T ss_pred CeEEEEEEe------CCceEEEEEcC
Confidence 566555432 35688888863
No 470
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=96.30 E-value=0.0031 Score=60.66 Aligned_cols=120 Identities=13% Similarity=0.106 Sum_probs=64.6
Q ss_pred eeEEeccccccchhhhccCC--CeEEEEeccCCCCchhHHH--------Hhhccc--ccccccCCCCCCCCCccchhhcc
Q 039518 469 RNAMDMNAYCGGFAVALNSL--PVWVMNIVPISMKNTLSAI--------YNRGIL--GAFHDWCEPFSTYPRTYDLLHAN 536 (617)
Q Consensus 469 Rn~mDm~~~~g~faa~l~~~--~v~vmnv~p~~~~~~l~~~--------~~RGli--g~~~~~~~~f~typrtyDl~H~~ 536 (617)
..|||+|||.|.++.+|... ..-|.-|=+.. ..|..+ -.+|+- -..+.=.+.++.-+.+ |.+.
T Consensus 29 ~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~--~~l~~~~~~a~~~~~~~~~~~v~~~~~d~~~l~~~~~~-d~v~-- 103 (218)
T 3mq2_A 29 DVVLDVGTGDGKHPYKVARQNPSRLVVALDADK--SRMEKISAKAAAKPAKGGLPNLLYLWATAERLPPLSGV-GELH-- 103 (218)
T ss_dssp EEEEEESCTTCHHHHHHHHHCTTEEEEEEESCG--GGGHHHHHHHTSCGGGTCCTTEEEEECCSTTCCSCCCE-EEEE--
T ss_pred CEEEEecCCCCHHHHHHHHHCCCCEEEEEECCH--HHHHHHHHHHHHhhhhcCCCceEEEecchhhCCCCCCC-CEEE--
Confidence 57999999999999998765 33333332222 333322 134432 1121111223322244 6665
Q ss_pred ccccccccCC--CCCChhhHHhhhhhcccCCceEEEec------------------C-hHHHHHHHhhhhcCCceEEEe
Q 039518 537 HLFSHYKNRG--EVCSLEDIMLEMDLIIRPQGFIIIRD------------------E-KSLITRIRDLAPKFLWDVELH 594 (617)
Q Consensus 537 ~~~s~~~~~~--~~c~~~~~l~e~dRilRP~G~~i~~d------------------~-~~~~~~~~~~~~~~~W~~~~~ 594 (617)
.+|+ |.... .-=+...+|-|+-|+|||||.+++.- . ....+.+++++..--|++...
T Consensus 104 ~~~~-~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~i~~~ 181 (218)
T 3mq2_A 104 VLMP-WGSLLRGVLGSSPEMLRGMAAVCRPGASFLVALNLHAWRPSVPEVGEHPEPTPDSADEWLAPRYAEAGWKLADC 181 (218)
T ss_dssp EESC-CHHHHHHHHTSSSHHHHHHHHTEEEEEEEEEEEEGGGBTTBCGGGTTCCCCCHHHHHHHHHHHHHHTTEEEEEE
T ss_pred EEcc-chhhhhhhhccHHHHHHHHHHHcCCCcEEEEEeccccccccccccccCCccchHHHHHHHHHHHHHcCCCceee
Confidence 2221 10000 00011578999999999999999952 1 122334777777777876544
No 471
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=96.28 E-value=0.0039 Score=63.45 Aligned_cols=138 Identities=12% Similarity=0.055 Sum_probs=73.2
Q ss_pred eeEEeccccccchhhhccCCCeEEEEeccCCCC-chhHHHHhh-----cc-----------cccc-cccCCCCCCCCCcc
Q 039518 469 RNAMDMNAYCGGFAVALNSLPVWVMNIVPISMK-NTLSAIYNR-----GI-----------LGAF-HDWCEPFSTYPRTY 530 (617)
Q Consensus 469 Rn~mDm~~~~g~faa~l~~~~v~vmnv~p~~~~-~~l~~~~~R-----Gl-----------ig~~-~~~~~~f~typrty 530 (617)
++|||+|||.|+++..|...+.- +|+-.|-. .-+.++-++ |+ +-+. .|-.+-... +.+|
T Consensus 77 ~~VLdiG~G~G~~~~~l~~~~~~--~v~~vDid~~~i~~ar~~~~~~~~l~~~~~~~~~~~v~~~~~D~~~~l~~-~~~f 153 (281)
T 1mjf_A 77 KRVLVIGGGDGGTVREVLQHDVD--EVIMVEIDEDVIMVSKDLIKIDNGLLEAMLNGKHEKAKLTIGDGFEFIKN-NRGF 153 (281)
T ss_dssp CEEEEEECTTSHHHHHHTTSCCS--EEEEEESCHHHHHHHHHHTCTTTTHHHHHHTTCCSSEEEEESCHHHHHHH-CCCE
T ss_pred CeEEEEcCCcCHHHHHHHhCCCC--EEEEEECCHHHHHHHHHHHhhccccccccccCCCCcEEEEECchHHHhcc-cCCe
Confidence 68999999999999999877541 22222322 333333222 22 1111 111111112 5789
Q ss_pred chhhccccccccccCCCCCChhhHHhhhhhcccCCceEEEec-----ChHHHHHHHhhhhcCCceEEEeec--cccCCCc
Q 039518 531 DLLHANHLFSHYKNRGEVCSLEDIMLEMDLIIRPQGFIIIRD-----EKSLITRIRDLAPKFLWDVELHSL--ENREKKM 603 (617)
Q Consensus 531 Dl~H~~~~~s~~~~~~~~c~~~~~l~e~dRilRP~G~~i~~d-----~~~~~~~~~~~~~~~~W~~~~~~~--e~~~~~~ 603 (617)
|+|-++... .+. ....--...++-++-|+|+|||.+++.. ..+.+..+.+..+..--.+..... ..+ .+.
T Consensus 154 D~Ii~d~~~-~~~-~~~~l~~~~~l~~~~~~L~pgG~lv~~~~~~~~~~~~~~~~~~~l~~~f~~v~~~~~~vP~~-~g~ 230 (281)
T 1mjf_A 154 DVIIADSTD-PVG-PAKVLFSEEFYRYVYDALNNPGIYVTQAGSVYLFTDELISAYKEMKKVFDRVYYYSFPVIGY-ASP 230 (281)
T ss_dssp EEEEEECCC-CC------TTSHHHHHHHHHHEEEEEEEEEEEEETTTSHHHHHHHHHHHHHHCSEEEEEEECCTTS-SSS
T ss_pred eEEEECCCC-CCC-cchhhhHHHHHHHHHHhcCCCcEEEEEcCCcccCHHHHHHHHHHHHHHCCceEEEEEecCCC-Cce
Confidence 999876432 110 0001012467889999999999999962 334445555444443333333221 112 234
Q ss_pred eeEEEEEec
Q 039518 604 ESVLICRKK 612 (617)
Q Consensus 604 ~~~l~~~k~ 612 (617)
..++++.|.
T Consensus 231 ~~~~~as~~ 239 (281)
T 1mjf_A 231 WAFLVGVKG 239 (281)
T ss_dssp EEEEEEEES
T ss_pred EEEEEeeCC
Confidence 667888875
No 472
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=96.26 E-value=0.0023 Score=67.53 Aligned_cols=95 Identities=11% Similarity=0.172 Sum_probs=61.4
Q ss_pred CCCeeeEEeccccccchhhhccC--CC--eEEEEeccCCCCchhHHHHhh-cccccccccCCCCCCCCCccchhhccccc
Q 039518 465 ETEIRNAMDMNAYCGGFAVALNS--LP--VWVMNIVPISMKNTLSAIYNR-GILGAFHDWCEPFSTYPRTYDLLHANHLF 539 (617)
Q Consensus 465 ~~~~Rn~mDm~~~~g~faa~l~~--~~--v~vmnv~p~~~~~~l~~~~~R-Glig~~~~~~~~f~typrtyDl~H~~~~~ 539 (617)
....+.|+|+|||.|.++.+|.+ .. +.+.-+ | ..+..+-++ ++-=+-+|.-+++ |.. |+|.+..++
T Consensus 199 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~----~~~~~a~~~~~v~~~~~D~~~~~---p~~-D~v~~~~vl 269 (364)
T 3p9c_A 199 FEGLGTLVDVGGGVGATVAAIAAHYPTIKGVNFDL-P----HVISEAPQFPGVTHVGGDMFKEV---PSG-DTILMKWIL 269 (364)
T ss_dssp TTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-H----HHHTTCCCCTTEEEEECCTTTCC---CCC-SEEEEESCG
T ss_pred ccCCCEEEEeCCCCCHHHHHHHHHCCCCeEEEecC-H----HHHHhhhhcCCeEEEeCCcCCCC---CCC-CEEEehHHh
Confidence 45678999999999999999964 22 333333 1 111111111 2222345555544 444 999998888
Q ss_pred cccccCCCCCChhhHHhhhhhcccCCceEEEec
Q 039518 540 SHYKNRGEVCSLEDIMLEMDLIIRPQGFIIIRD 572 (617)
Q Consensus 540 s~~~~~~~~c~~~~~l~e~dRilRP~G~~i~~d 572 (617)
-.| .+ -....+|-++=|.|+|||.++|.|
T Consensus 270 h~~---~d-~~~~~~L~~~~~~L~pgG~l~i~e 298 (364)
T 3p9c_A 270 HDW---SD-QHCATLLKNCYDALPAHGKVVLVQ 298 (364)
T ss_dssp GGS---CH-HHHHHHHHHHHHHSCTTCEEEEEE
T ss_pred ccC---CH-HHHHHHHHHHHHHcCCCCEEEEEE
Confidence 766 21 123478999999999999999964
No 473
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=96.25 E-value=0.00052 Score=66.58 Aligned_cols=93 Identities=12% Similarity=0.132 Sum_probs=55.4
Q ss_pred CCCCCeeeEEeccccccchhhhccCC------C-eEEEEeccCCCC-chhHHHHhh----cc-------cc-cccccCCC
Q 039518 463 VNETEIRNAMDMNAYCGGFAVALNSL------P-VWVMNIVPISMK-NTLSAIYNR----GI-------LG-AFHDWCEP 522 (617)
Q Consensus 463 ~~~~~~Rn~mDm~~~~g~faa~l~~~------~-v~vmnv~p~~~~-~~l~~~~~R----Gl-------ig-~~~~~~~~ 522 (617)
+..+ .+|||+|||.|.+++.|... | .-|..| |.. ..+..+-++ |+ +- +..|..+.
T Consensus 78 ~~~~--~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~v---D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~ 152 (227)
T 2pbf_A 78 LKPG--SRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGL---ERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNIYQV 152 (227)
T ss_dssp SCTT--CEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEE---ESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCGGGC
T ss_pred CCCC--CEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEE---eCCHHHHHHHHHHHHHcCccccccCCEEEEECChHhc
Confidence 4554 58999999999999888542 1 122222 222 333333333 32 11 12233332
Q ss_pred CC---CCCCccchhhccccccccccCCCCCChhhHHhhhhhcccCCceEEEec
Q 039518 523 FS---TYPRTYDLLHANHLFSHYKNRGEVCSLEDIMLEMDLIIRPQGFIIIRD 572 (617)
Q Consensus 523 f~---typrtyDl~H~~~~~s~~~~~~~~c~~~~~l~e~dRilRP~G~~i~~d 572 (617)
++ .-+..||+|+++..+. .++-++-++|+|||.+++.-
T Consensus 153 ~~~~~~~~~~fD~I~~~~~~~------------~~~~~~~~~LkpgG~lv~~~ 193 (227)
T 2pbf_A 153 NEEEKKELGLFDAIHVGASAS------------ELPEILVDLLAENGKLIIPI 193 (227)
T ss_dssp CHHHHHHHCCEEEEEECSBBS------------SCCHHHHHHEEEEEEEEEEE
T ss_pred ccccCccCCCcCEEEECCchH------------HHHHHHHHhcCCCcEEEEEE
Confidence 10 1126899999776665 24678889999999999874
No 474
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=96.23 E-value=0.00098 Score=68.85 Aligned_cols=101 Identities=10% Similarity=0.077 Sum_probs=63.3
Q ss_pred HHHHHhccCCCCCeeeEEeccccccchhhhccCC--C---eEEEEeccCCCCchhHHHHhh----cccc---cccccCCC
Q 039518 455 RHYWQLMNVNETEIRNAMDMNAYCGGFAVALNSL--P---VWVMNIVPISMKNTLSAIYNR----GILG---AFHDWCEP 522 (617)
Q Consensus 455 ~~y~~~~~~~~~~~Rn~mDm~~~~g~faa~l~~~--~---v~vmnv~p~~~~~~l~~~~~R----Glig---~~~~~~~~ 522 (617)
....+.+.+..+ .+|||+|||.|.++..|... + |..+-+. ++.+..+-++ |+-. ...|..+.
T Consensus 65 ~~l~~~l~~~~~--~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s----~~~~~~a~~~~~~~g~~~v~~~~~d~~~~ 138 (317)
T 1dl5_A 65 ALFMEWVGLDKG--MRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYS----RKICEIAKRNVERLGIENVIFVCGDGYYG 138 (317)
T ss_dssp HHHHHHTTCCTT--CEEEEECCTTSHHHHHHHHHHCTTCEEEEEESC----HHHHHHHHHHHHHTTCCSEEEEESCGGGC
T ss_pred HHHHHhcCCCCc--CEEEEecCCchHHHHHHHHhcCCCCEEEEEECC----HHHHHHHHHHHHHcCCCCeEEEECChhhc
Confidence 334444556665 48999999999999888642 2 4333221 2555555444 5422 12333332
Q ss_pred CCCCCCccchhhccccccccccCCCCCChhhHHhhhhhcccCCceEEEecCh
Q 039518 523 FSTYPRTYDLLHANHLFSHYKNRGEVCSLEDIMLEMDLIIRPQGFIIIRDEK 574 (617)
Q Consensus 523 f~typrtyDl~H~~~~~s~~~~~~~~c~~~~~l~e~dRilRP~G~~i~~d~~ 574 (617)
.+ -+..||+|.+...+.+. .-++-|+|+|||.+++....
T Consensus 139 ~~-~~~~fD~Iv~~~~~~~~------------~~~~~~~LkpgG~lvi~~~~ 177 (317)
T 1dl5_A 139 VP-EFSPYDVIFVTVGVDEV------------PETWFTQLKEGGRVIVPINL 177 (317)
T ss_dssp CG-GGCCEEEEEECSBBSCC------------CHHHHHHEEEEEEEEEEBCB
T ss_pred cc-cCCCeEEEEEcCCHHHH------------HHHHHHhcCCCcEEEEEECC
Confidence 22 13689999988888743 24778999999999998543
No 475
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=96.22 E-value=0.00084 Score=62.54 Aligned_cols=96 Identities=15% Similarity=0.195 Sum_probs=55.5
Q ss_pred eeEEeccccccchhhhccCCCeEEEEeccCCCC-chhHHHH----hhcc---ccc-ccccCCCCCCC---CCccchhhcc
Q 039518 469 RNAMDMNAYCGGFAVALNSLPVWVMNIVPISMK-NTLSAIY----NRGI---LGA-FHDWCEPFSTY---PRTYDLLHAN 536 (617)
Q Consensus 469 Rn~mDm~~~~g~faa~l~~~~v~vmnv~p~~~~-~~l~~~~----~RGl---ig~-~~~~~~~f~ty---prtyDl~H~~ 536 (617)
.+|||+|||.|.++.++...+.. .|+-.|-. ..+..+- ..|+ +-+ ..|+.+..+.. +.+||+|-++
T Consensus 46 ~~vLD~GcG~G~~~~~~~~~~~~--~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~fD~i~~~ 123 (187)
T 2fhp_A 46 GMALDLYSGSGGLAIEAVSRGMD--KSICIEKNFAALKVIKENIAITKEPEKFEVRKMDANRALEQFYEEKLQFDLVLLD 123 (187)
T ss_dssp CEEEETTCTTCHHHHHHHHTTCS--EEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHHTTCCEEEEEEC
T ss_pred CCEEEeCCccCHHHHHHHHcCCC--EEEEEECCHHHHHHHHHHHHHhCCCcceEEEECcHHHHHHHHHhcCCCCCEEEEC
Confidence 58999999999998877655421 12222332 3333322 2233 112 22333322211 3689999877
Q ss_pred ccccccccCCCCCChhhHHhhh--hhcccCCceEEEecC
Q 039518 537 HLFSHYKNRGEVCSLEDIMLEM--DLIIRPQGFIIIRDE 573 (617)
Q Consensus 537 ~~~s~~~~~~~~c~~~~~l~e~--dRilRP~G~~i~~d~ 573 (617)
..|.. -....++-++ -|+|+|||.+++...
T Consensus 124 ~~~~~-------~~~~~~~~~l~~~~~L~~gG~l~~~~~ 155 (187)
T 2fhp_A 124 PPYAK-------QEIVSQLEKMLERQLLTNEAVIVCETD 155 (187)
T ss_dssp CCGGG-------CCHHHHHHHHHHTTCEEEEEEEEEEEE
T ss_pred CCCCc-------hhHHHHHHHHHHhcccCCCCEEEEEeC
Confidence 66541 1234555555 999999999999743
No 476
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=96.21 E-value=0.0072 Score=61.34 Aligned_cols=144 Identities=11% Similarity=0.082 Sum_probs=76.7
Q ss_pred CeeeEEeccccccchhhhccCC-CeEEEEeccCCCCchhHHHHhh------cc----cccc-cccCCCCCCCCCccchhh
Q 039518 467 EIRNAMDMNAYCGGFAVALNSL-PVWVMNIVPISMKNTLSAIYNR------GI----LGAF-HDWCEPFSTYPRTYDLLH 534 (617)
Q Consensus 467 ~~Rn~mDm~~~~g~faa~l~~~-~v~vmnv~p~~~~~~l~~~~~R------Gl----ig~~-~~~~~~f~typrtyDl~H 534 (617)
.-++|||+|||.|+++..+.+. ++--+-+|=.+. .-+.++-+. ++ +-++ .|-.+-....+.+||+|-
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vEid~-~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~fD~Ii 153 (275)
T 1iy9_A 75 NPEHVLVVGGGDGGVIREILKHPSVKKATLVDIDG-KVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIAKSENQYDVIM 153 (275)
T ss_dssp SCCEEEEESCTTCHHHHHHTTCTTCSEEEEEESCH-HHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHHTCCSCEEEEE
T ss_pred CCCEEEEECCchHHHHHHHHhCCCCceEEEEECCH-HHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCeeEEE
Confidence 3589999999999999999876 442222222221 233333221 21 1111 111111122257899998
Q ss_pred ccccccccccCCCCCChhhHHhhhhhcccCCceEEEec-----ChHHHHHHHhhhhcCCceEEEeec--cccCCCceeEE
Q 039518 535 ANHLFSHYKNRGEVCSLEDIMLEMDLIIRPQGFIIIRD-----EKSLITRIRDLAPKFLWDVELHSL--ENREKKMESVL 607 (617)
Q Consensus 535 ~~~~~s~~~~~~~~c~~~~~l~e~dRilRP~G~~i~~d-----~~~~~~~~~~~~~~~~W~~~~~~~--e~~~~~~~~~l 607 (617)
++...... ....-....++-++-|+|+|||.+++.. ..+.+..+.+.++..=-.+..... ...+.+...++
T Consensus 154 ~d~~~~~~--~~~~l~~~~~~~~~~~~L~pgG~lv~~~~~~~~~~~~~~~~~~~l~~~F~~v~~~~~~vp~~~~g~w~~~ 231 (275)
T 1iy9_A 154 VDSTEPVG--PAVNLFTKGFYAGIAKALKEDGIFVAQTDNPWFTPELITNVQRDVKEIFPITKLYTANIPTYPSGLWTFT 231 (275)
T ss_dssp ESCSSCCS--CCCCCSTTHHHHHHHHHEEEEEEEEEECCCTTTCHHHHHHHHHHHHTTCSEEEEEEECCTTSGGGCEEEE
T ss_pred ECCCCCCC--cchhhhHHHHHHHHHHhcCCCcEEEEEcCCccccHHHHHHHHHHHHHhCCCeEEEEEecCcccCcceEEE
Confidence 76433211 0111112478889999999999999972 234445555544444333443321 11222345677
Q ss_pred EEEecc
Q 039518 608 ICRKKF 613 (617)
Q Consensus 608 ~~~k~~ 613 (617)
++.|++
T Consensus 232 ~ask~~ 237 (275)
T 1iy9_A 232 IGSKKY 237 (275)
T ss_dssp EEESSC
T ss_pred EeeCCC
Confidence 888763
No 477
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=96.20 E-value=0.0039 Score=63.07 Aligned_cols=102 Identities=18% Similarity=0.242 Sum_probs=58.4
Q ss_pred ccCCCCeEEEECCCCcHHHHHhccC-CCc--EEEeeecCCcHHHHHHHHH-hCCCc-EEEEe-cCCCCCCCCCCeeEEEe
Q 039518 225 RSAGVFQVLDVGCGVASFSAFLLPL-DIQ--TMSFAPKDGHENQIQFALE-RGIGA-MISAL-STKQLPYPSSSFEMVHC 298 (617)
Q Consensus 225 r~~~g~rVLDIGCGtG~~a~~La~~-gv~--~v~v~~iDis~~~lq~A~e-rg~~~-~~~~~-d~~~Lpf~d~sFDlV~~ 298 (617)
-+.++++|||+||+.|.|+.+.+++ ++. .-.+.++|++..- .... .|.++ .+..+ |+..++ ...+|+|+|
T Consensus 70 likpg~~VVDLGaAPGGWSQvAa~~~~vg~V~G~vig~D~~~~P--~~~~~~Gv~~i~~~~G~Df~~~~--~~~~DvVLS 145 (269)
T 2px2_A 70 FVQPIGKVVDLGCGRGGWSYYAATMKNVQEVRGYTKGGPGHEEP--MLMQSYGWNIVTMKSGVDVFYKP--SEISDTLLC 145 (269)
T ss_dssp SCCCCEEEEEETCTTSHHHHHHTTSTTEEEEEEECCCSTTSCCC--CCCCSTTGGGEEEECSCCGGGSC--CCCCSEEEE
T ss_pred CCCCCCEEEEcCCCCCHHHHHHhhhcCCCCceeEEEccccccCC--CcccCCCceEEEeeccCCccCCC--CCCCCEEEe
Confidence 4678999999999999999999886 221 0123344521000 0000 12222 33335 766543 567999998
Q ss_pred ccccc--ccccchH---HHHHHHHHhccCCe-EEEEEe
Q 039518 299 SRCRV--DWHANDG---ILLKEVDRVLRPNG-YFVYSA 330 (617)
Q Consensus 299 s~~l~--h~~~d~~---~~L~el~RvLrPGG-~Liis~ 330 (617)
-.+-- +..-|.. .+|.-+.++|+||| .|++-.
T Consensus 146 DMAPnSG~~~vD~~Rs~~aL~~A~~~Lk~gG~~FvvKV 183 (269)
T 2px2_A 146 DIGESSPSAEIEEQRTLRILEMVSDWLSRGPKEFCIKI 183 (269)
T ss_dssp CCCCCCSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEE
T ss_pred CCCCCCCccHHHHHHHHHHHHHHHHHhhcCCcEEEEEE
Confidence 43211 1111111 14666669999999 888855
No 478
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=96.19 E-value=0.0026 Score=64.92 Aligned_cols=151 Identities=9% Similarity=0.143 Sum_probs=87.4
Q ss_pred cchhhHHHHHHHHHHhccCCCCCeeeEEeccccccchhhhccCCCeEEEEeccCCCC-chhHHHHhh----cc---cc-c
Q 039518 445 TDTSFWQDQVRHYWQLMNVNETEIRNAMDMNAYCGGFAVALNSLPVWVMNIVPISMK-NTLSAIYNR----GI---LG-A 515 (617)
Q Consensus 445 ~d~~~w~~~v~~y~~~~~~~~~~~Rn~mDm~~~~g~faa~l~~~~v~vmnv~p~~~~-~~l~~~~~R----Gl---ig-~ 515 (617)
.+++.+.+.+-.+.. ...+ .+|||+|||.|.++.+|...|-+ +|+-.|-. ..+.++-++ |+ +- +
T Consensus 106 ~~te~lv~~~l~~~~---~~~~--~~vLDlG~GsG~~~~~la~~~~~--~v~~vDis~~al~~A~~n~~~~~l~~~v~~~ 178 (284)
T 1nv8_A 106 PETEELVELALELIR---KYGI--KTVADIGTGSGAIGVSVAKFSDA--IVFATDVSSKAVEIARKNAERHGVSDRFFVR 178 (284)
T ss_dssp TTHHHHHHHHHHHHH---HHTC--CEEEEESCTTSHHHHHHHHHSSC--EEEEEESCHHHHHHHHHHHHHTTCTTSEEEE
T ss_pred hhHHHHHHHHHHHhc---ccCC--CEEEEEeCchhHHHHHHHHCCCC--EEEEEECCHHHHHHHHHHHHHcCCCCceEEE
Confidence 345555555544433 1122 47999999999999988655321 22233333 444444332 44 22 2
Q ss_pred ccccCCCCCCCCCcc---chhhccccccc----------cc---cCCCCCChhhHHhhhh-hcccCCceEEEecChHHHH
Q 039518 516 FHDWCEPFSTYPRTY---DLLHANHLFSH----------YK---NRGEVCSLEDIMLEMD-LIIRPQGFIIIRDEKSLIT 578 (617)
Q Consensus 516 ~~~~~~~f~typrty---Dl~H~~~~~s~----------~~---~~~~~c~~~~~l~e~d-RilRP~G~~i~~d~~~~~~ 578 (617)
..||.++++ .+| |+|-++--+.. |. ..-..+.-..++-++= +.|+|||++++--..+.-+
T Consensus 179 ~~D~~~~~~---~~f~~~D~IvsnPPyi~~~~~l~~~v~~ep~~al~~~~dgl~~~~~i~~~~l~pgG~l~~e~~~~q~~ 255 (284)
T 1nv8_A 179 KGEFLEPFK---EKFASIEMILSNPPYVKSSAHLPKDVLFEPPEALFGGEDGLDFYREFFGRYDTSGKIVLMEIGEDQVE 255 (284)
T ss_dssp ESSTTGGGG---GGTTTCCEEEECCCCBCGGGSCTTSCCCSCHHHHBCTTTSCHHHHHHHHHCCCTTCEEEEECCTTCHH
T ss_pred ECcchhhcc---cccCCCCEEEEcCCCCCcccccChhhccCcHHHhcCCCcHHHHHHHHHHhcCCCCCEEEEEECchHHH
Confidence 346665443 578 99987622221 00 0001122236788888 9999999999975556667
Q ss_pred HHHhhhhcCCceEEEeeccccCCCceeEEEEEec
Q 039518 579 RIRDLAPKFLWDVELHSLENREKKMESVLICRKK 612 (617)
Q Consensus 579 ~~~~~~~~~~W~~~~~~~e~~~~~~~~~l~~~k~ 612 (617)
.++++.+.. ....| -.+.++++++.++
T Consensus 256 ~v~~~~~~~---~~~~D----~~g~~R~~~~~~k 282 (284)
T 1nv8_A 256 ELKKIVSDT---VFLKD----SAGKYRFLLLNRR 282 (284)
T ss_dssp HHTTTSTTC---EEEEC----TTSSEEEEEEECC
T ss_pred HHHHHHHhC---Ceecc----cCCCceEEEEEEc
Confidence 788777665 22222 2345888888775
No 479
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=96.19 E-value=0.00062 Score=71.22 Aligned_cols=97 Identities=14% Similarity=0.170 Sum_probs=58.8
Q ss_pred eeEEeccccccchhhhccCC----CeEEEEeccCCCC-chhHHHHh----hcccccccccCCCCCCCCCccchhhccccc
Q 039518 469 RNAMDMNAYCGGFAVALNSL----PVWVMNIVPISMK-NTLSAIYN----RGILGAFHDWCEPFSTYPRTYDLLHANHLF 539 (617)
Q Consensus 469 Rn~mDm~~~~g~faa~l~~~----~v~vmnv~p~~~~-~~l~~~~~----RGlig~~~~~~~~f~typrtyDl~H~~~~~ 539 (617)
.+|||+|||.|.++.+|... .|..+ |.. .-+..+-+ .|+-..+ -+...++.-+.+||+|-++..|
T Consensus 198 ~~VLDlGcG~G~~~~~la~~~~~~~v~~v-----D~s~~~l~~a~~~~~~~~~~~~~-~~~d~~~~~~~~fD~Iv~~~~~ 271 (343)
T 2pjd_A 198 GKVLDVGCGAGVLSVAFARHSPKIRLTLC-----DVSAPAVEASRATLAANGVEGEV-FASNVFSEVKGRFDMIISNPPF 271 (343)
T ss_dssp SBCCBTTCTTSHHHHHHHHHCTTCBCEEE-----ESBHHHHHHHHHHHHHTTCCCEE-EECSTTTTCCSCEEEEEECCCC
T ss_pred CeEEEecCccCHHHHHHHHHCCCCEEEEE-----ECCHHHHHHHHHHHHHhCCCCEE-EEccccccccCCeeEEEECCCc
Confidence 47999999999999888543 23332 332 33333332 2432211 1222233225899999998877
Q ss_pred cccccCCCCCChhhHHhhhhhcccCCceEEEec
Q 039518 540 SHYKNRGEVCSLEDIMLEMDLIIRPQGFIIIRD 572 (617)
Q Consensus 540 s~~~~~~~~c~~~~~l~e~dRilRP~G~~i~~d 572 (617)
..-. ....-....++-|+-|+|+|||.+++-.
T Consensus 272 ~~g~-~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 303 (343)
T 2pjd_A 272 HDGM-QTSLDAAQTLIRGAVRHLNSGGELRIVA 303 (343)
T ss_dssp CSSS-HHHHHHHHHHHHHHGGGEEEEEEEEEEE
T ss_pred ccCc-cCCHHHHHHHHHHHHHhCCCCcEEEEEE
Confidence 5210 0011124578999999999999999964
No 480
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=96.17 E-value=0.003 Score=63.00 Aligned_cols=93 Identities=11% Similarity=0.074 Sum_probs=53.5
Q ss_pred eeEEeccccccchhhhccCC---CeEEEEeccCCCCchhHHHH----hhccc---ccc-cccCCCCCCC------CCccc
Q 039518 469 RNAMDMNAYCGGFAVALNSL---PVWVMNIVPISMKNTLSAIY----NRGIL---GAF-HDWCEPFSTY------PRTYD 531 (617)
Q Consensus 469 Rn~mDm~~~~g~faa~l~~~---~v~vmnv~p~~~~~~l~~~~----~RGli---g~~-~~~~~~f~ty------prtyD 531 (617)
++|||+|||.|.++..|... ..-|..+=... ..+.++- +.|+- -+. .|..+..+.. +.+||
T Consensus 81 ~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~--~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~fD 158 (247)
T 1sui_A 81 KNTMEIGVYTGYSLLATALAIPEDGKILAMDINK--ENYELGLPVIKKAGVDHKIDFREGPALPVLDEMIKDEKNHGSYD 158 (247)
T ss_dssp CEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCC--HHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSGGGTTCBS
T ss_pred CEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCH--HHHHHHHHHHHHcCCCCCeEEEECCHHHHHHHHHhccCCCCCEE
Confidence 68999999999998877532 22222222211 2232322 23541 121 1222222222 47899
Q ss_pred hhhccccccccccCCCCCChhhHHhhhhhcccCCceEEEec
Q 039518 532 LLHANHLFSHYKNRGEVCSLEDIMLEMDLIIRPQGFIIIRD 572 (617)
Q Consensus 532 l~H~~~~~s~~~~~~~~c~~~~~l~e~dRilRP~G~~i~~d 572 (617)
+|-++.-.. ....++-++-|+|||||.+++.+
T Consensus 159 ~V~~d~~~~---------~~~~~l~~~~~~LkpGG~lv~d~ 190 (247)
T 1sui_A 159 FIFVDADKD---------NYLNYHKRLIDLVKVGGVIGYDN 190 (247)
T ss_dssp EEEECSCST---------THHHHHHHHHHHBCTTCCEEEEC
T ss_pred EEEEcCchH---------HHHHHHHHHHHhCCCCeEEEEec
Confidence 997543221 34577888999999999999863
No 481
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=96.15 E-value=0.0052 Score=61.37 Aligned_cols=101 Identities=16% Similarity=0.228 Sum_probs=62.6
Q ss_pred ccCCCCCeeeEEeccccccchhhhccC-----CCeEEEEeccCCCCchhHHHHhhc-ccccccccCCCC--CCCCCccch
Q 039518 461 MNVNETEIRNAMDMNAYCGGFAVALNS-----LPVWVMNIVPISMKNTLSAIYNRG-ILGAFHDWCEPF--STYPRTYDL 532 (617)
Q Consensus 461 ~~~~~~~~Rn~mDm~~~~g~faa~l~~-----~~v~vmnv~p~~~~~~l~~~~~RG-lig~~~~~~~~f--~typrtyDl 532 (617)
|+|++|. +|||+|||.|.|+.+|.+ -.|....+.|.-...-...+-+++ +.-+..|-+.+- +.-+.++|+
T Consensus 73 l~ikpG~--~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~~ni~~V~~d~~~p~~~~~~~~~vDv 150 (233)
T 4df3_A 73 LPVKEGD--RILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDRRNIFPILGDARFPEKYRHLVEGVDG 150 (233)
T ss_dssp CCCCTTC--EEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTCTTEEEEESCTTCGGGGTTTCCCEEE
T ss_pred cCCCCCC--EEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhhcCeeEEEEeccCccccccccceEEE
Confidence 4478885 899999999999999864 236666654432221222233444 444555555432 112367887
Q ss_pred hhccccccccccCCCCCChhhHHhhhhhcccCCceEEEe
Q 039518 533 LHANHLFSHYKNRGEVCSLEDIMLEMDLIIRPQGFIIIR 571 (617)
Q Consensus 533 ~H~~~~~s~~~~~~~~c~~~~~l~e~dRilRP~G~~i~~ 571 (617)
|.++-.+. =....++.|+-|+|+|||.++|.
T Consensus 151 Vf~d~~~~--------~~~~~~l~~~~r~LKpGG~lvI~ 181 (233)
T 4df3_A 151 LYADVAQP--------EQAAIVVRNARFFLRDGGYMLMA 181 (233)
T ss_dssp EEECCCCT--------THHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEEeccCC--------hhHHHHHHHHHHhccCCCEEEEE
Confidence 76432111 12346889999999999999986
No 482
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=96.08 E-value=0.015 Score=59.76 Aligned_cols=144 Identities=10% Similarity=0.093 Sum_probs=72.9
Q ss_pred CeeeEEeccccccchhhhccCC-CeEEEEeccCCCCchhHHHHhh------------cccccccccCCCCCCCCCccchh
Q 039518 467 EIRNAMDMNAYCGGFAVALNSL-PVWVMNIVPISMKNTLSAIYNR------------GILGAFHDWCEPFSTYPRTYDLL 533 (617)
Q Consensus 467 ~~Rn~mDm~~~~g~faa~l~~~-~v~vmnv~p~~~~~~l~~~~~R------------Glig~~~~~~~~f~typrtyDl~ 533 (617)
.-++|||+|||.|+++..|... ++--+-.|=.+. .-+.++-++ .+-=+..|..+.....+.+||+|
T Consensus 83 ~~~~VLdiG~G~G~~~~~l~~~~~~~~V~~VDid~-~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fDvI 161 (294)
T 3adn_A 83 HAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDA-GVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVI 161 (294)
T ss_dssp TCCEEEEESCTTCHHHHHHHTCTTCCEEEEECSCT-THHHHHHHHCHHHHSSCTTCTTCCEECSCSCC---CCCCCEEEE
T ss_pred CCCEEEEEeCChhHHHHHHHhCCCCCEEEEEECCH-HHHHHHHHhhhhcccccccCCceEEEEChHHHHHhhcCCCccEE
Confidence 4579999999999999998776 443222233222 333333221 11112233333333335799999
Q ss_pred hccccccccccCCCCCChhhHHhhhhhcccCCceEEEec-----ChHHHHHHHhhhhcCCceEEEee--ccccCCCceeE
Q 039518 534 HANHLFSHYKNRGEVCSLEDIMLEMDLIIRPQGFIIIRD-----EKSLITRIRDLAPKFLWDVELHS--LENREKKMESV 606 (617)
Q Consensus 534 H~~~~~s~~~~~~~~c~~~~~l~e~dRilRP~G~~i~~d-----~~~~~~~~~~~~~~~~W~~~~~~--~e~~~~~~~~~ 606 (617)
-++.. ..+ ..........++-++-|+|+|||.+++.- ..+.+..+.+..+..--.+.... ....+.+.-..
T Consensus 162 i~D~~-~p~-~~~~~l~~~~f~~~~~~~LkpgG~lv~~~~s~~~~~~~~~~~~~~l~~~F~~v~~~~~~vp~~p~g~~~f 239 (294)
T 3adn_A 162 ISDCT-DPI-GPGESLFTSAFYEGCKRCLNPGGIFVAQNGVCFLQQEEAIDSHRKLSHYFSDVGFYQAAIPTYYGGIMTF 239 (294)
T ss_dssp EECC------------CCHHHHHHHHHTEEEEEEEEEEEEECSSCCHHHHHHHHHHHHHCSEEEEEEEECTTSSSSEEEE
T ss_pred EECCC-Ccc-CcchhccHHHHHHHHHHhcCCCCEEEEecCCcccchHHHHHHHHHHHHHCCCeEEEEEEecccCCCceEE
Confidence 87532 211 00111112568889999999999999962 22333333333332222333221 12223334467
Q ss_pred EEEEecc
Q 039518 607 LICRKKF 613 (617)
Q Consensus 607 l~~~k~~ 613 (617)
+++.|.+
T Consensus 240 ~~as~~~ 246 (294)
T 3adn_A 240 AWATDND 246 (294)
T ss_dssp EEEESCT
T ss_pred EEEeCCc
Confidence 7777754
No 483
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=96.05 E-value=0.0027 Score=69.79 Aligned_cols=93 Identities=9% Similarity=0.103 Sum_probs=57.9
Q ss_pred eeEEeccccccchhhhccCCCe-EEEEeccCCCCchhHH----HHhhcc---cccc-cccCCCCCCCCCccchhhccccc
Q 039518 469 RNAMDMNAYCGGFAVALNSLPV-WVMNIVPISMKNTLSA----IYNRGI---LGAF-HDWCEPFSTYPRTYDLLHANHLF 539 (617)
Q Consensus 469 Rn~mDm~~~~g~faa~l~~~~v-~vmnv~p~~~~~~l~~----~~~RGl---ig~~-~~~~~~f~typrtyDl~H~~~~~ 539 (617)
..|||+|||.|.++..|...+. -|.-|=. ...+.. +.+.|+ |-++ .|+.+ + .+|..||+|-+..++
T Consensus 160 ~~VLDiGcGtG~la~~la~~~~~~V~gvD~---s~~l~~A~~~~~~~gl~~~v~~~~~d~~~-~-~~~~~fD~Ivs~~~~ 234 (480)
T 3b3j_A 160 KIVLDVGCGSGILSFFAAQAGARKIYAVEA---STMAQHAEVLVKSNNLTDRIVVIPGKVEE-V-SLPEQVDIIISEPMG 234 (480)
T ss_dssp CEEEEESCSTTHHHHHHHHTTCSEEEEEEC---HHHHHHHHHHHHHTTCTTTEEEEESCTTT-C-CCSSCEEEEECCCCH
T ss_pred CEEEEecCcccHHHHHHHHcCCCEEEEEEc---HHHHHHHHHHHHHcCCCCcEEEEECchhh-C-ccCCCeEEEEEeCch
Confidence 5899999999999988876543 2322222 112222 333455 2222 33433 2 246789999987765
Q ss_pred cccccCCCCCChhhHHhhhhhcccCCceEEE
Q 039518 540 SHYKNRGEVCSLEDIMLEMDLIIRPQGFIII 570 (617)
Q Consensus 540 s~~~~~~~~c~~~~~l~e~dRilRP~G~~i~ 570 (617)
.++ . .-.+...+.++-|+|+|||.+++
T Consensus 235 ~~~---~-~e~~~~~l~~~~~~LkpgG~li~ 261 (480)
T 3b3j_A 235 YML---F-NERMLESYLHAKKYLKPSGNMFP 261 (480)
T ss_dssp HHH---T-CHHHHHHHHHGGGGEEEEEEEES
T ss_pred Hhc---C-cHHHHHHHHHHHHhcCCCCEEEE
Confidence 543 1 11345677799999999999985
No 484
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=96.03 E-value=0.011 Score=60.83 Aligned_cols=134 Identities=12% Similarity=0.076 Sum_probs=74.4
Q ss_pred cCCCCCeeeEEeccc------cccc-hhhhccC--CCeEEEEeccCCCCchhHHHHhhcccc-cccccCCCCCCCCCccc
Q 039518 462 NVNETEIRNAMDMNA------YCGG-FAVALNS--LPVWVMNIVPISMKNTLSAIYNRGILG-AFHDWCEPFSTYPRTYD 531 (617)
Q Consensus 462 ~~~~~~~Rn~mDm~~------~~g~-faa~l~~--~~v~vmnv~p~~~~~~l~~~~~RGlig-~~~~~~~~f~typrtyD 531 (617)
.+..+ ..|||+|| |.|+ .+|.+.. -.|.-+-+-|. + + ++-= +..|+.+. + ++.+||
T Consensus 60 ~l~~g--~~VLDLGcGsg~~~GpGs~~~a~~~~~~~~V~gvDis~~-----v----~-~v~~~i~gD~~~~-~-~~~~fD 125 (290)
T 2xyq_A 60 AVPYN--MRVIHFGAGSDKGVAPGTAVLRQWLPTGTLLVDSDLNDF-----V----S-DADSTLIGDCATV-H-TANKWD 125 (290)
T ss_dssp CCCTT--CEEEEESCCCTTSBCHHHHHHHHHSCTTCEEEEEESSCC-----B----C-SSSEEEESCGGGC-C-CSSCEE
T ss_pred CCCCC--CEEEEeCCCCCCCCCcHHHHHHHHcCCCCEEEEEECCCC-----C----C-CCEEEEECccccC-C-ccCccc
Confidence 35555 46999999 4476 3333443 33555555444 1 1 3222 44566542 2 247899
Q ss_pred hhhccccccc---cc--cCCCCCChhhHHhhhhhcccCCceEEEecC-hHHHHHHHhhhhcCCc-eEEEeeccccCCCce
Q 039518 532 LLHANHLFSH---YK--NRGEVCSLEDIMLEMDLIIRPQGFIIIRDE-KSLITRIRDLAPKFLW-DVELHSLENREKKME 604 (617)
Q Consensus 532 l~H~~~~~s~---~~--~~~~~c~~~~~l~e~dRilRP~G~~i~~d~-~~~~~~~~~~~~~~~W-~~~~~~~e~~~~~~~ 604 (617)
+|.++..... +. .....-.+..+|-|+-|+|||||.+++... .....++.++++...+ .+... -......|
T Consensus 126 ~Vvsn~~~~~~g~~~~d~~~~~~l~~~~l~~a~r~LkpGG~~v~~~~~~~~~~~l~~~l~~~GF~~v~~~--asr~~s~e 203 (290)
T 2xyq_A 126 LIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITEHSWNADLYKLMGHFSWWTAFVT--NVNASSSE 203 (290)
T ss_dssp EEEECCCCCC---CCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECSSSCCHHHHHHHTTEEEEEEEEE--GGGTTSSC
T ss_pred EEEEcCCccccccccccccchHHHHHHHHHHHHHhcCCCcEEEEEEeccCCHHHHHHHHHHcCCcEEEEE--EcCCCchh
Confidence 9997643221 00 001111234788999999999999999531 1122356666666634 44444 12333468
Q ss_pred eEEEEEe
Q 039518 605 SVLICRK 611 (617)
Q Consensus 605 ~~l~~~k 611 (617)
-+|+++.
T Consensus 204 ~~lv~~~ 210 (290)
T 2xyq_A 204 AFLIGAN 210 (290)
T ss_dssp EEEEEEE
T ss_pred eEEecCC
Confidence 8888765
No 485
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=96.02 E-value=0.002 Score=61.95 Aligned_cols=97 Identities=11% Similarity=0.081 Sum_probs=56.4
Q ss_pred eeEEeccccccchhhhccCCCeEEEEeccCCCC-chhHHHHh----hcc--cccc-cccCCCCCCCCCccchhhcccccc
Q 039518 469 RNAMDMNAYCGGFAVALNSLPVWVMNIVPISMK-NTLSAIYN----RGI--LGAF-HDWCEPFSTYPRTYDLLHANHLFS 540 (617)
Q Consensus 469 Rn~mDm~~~~g~faa~l~~~~v~vmnv~p~~~~-~~l~~~~~----RGl--ig~~-~~~~~~f~typrtyDl~H~~~~~s 540 (617)
.+|||+|||.|.++..+.....- .|+-.|.. ..+..+-+ .|+ +-++ .|..+..+.-+.+||+|=++..|.
T Consensus 56 ~~vLDlgcG~G~~~~~l~~~~~~--~V~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~D~~~~~~~~~~~fD~V~~~~p~~ 133 (202)
T 2fpo_A 56 AQCLDCFAGSGALGLEALSRYAA--GATLIEMDRAVSQQLIKNLATLKAGNARVVNSNAMSFLAQKGTPHNIVFVDPPFR 133 (202)
T ss_dssp CEEEETTCTTCHHHHHHHHTTCS--EEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCHHHHHSSCCCCEEEEEECCSSS
T ss_pred CeEEEeCCCcCHHHHHHHhcCCC--EEEEEECCHHHHHHHHHHHHHcCCCcEEEEECCHHHHHhhcCCCCCEEEECCCCC
Confidence 57999999999998875544321 33334444 44444432 233 1112 232222232246899998665543
Q ss_pred ccccCCCCCChhhHHhhhh--hcccCCceEEEecCh
Q 039518 541 HYKNRGEVCSLEDIMLEMD--LIIRPQGFIIIRDEK 574 (617)
Q Consensus 541 ~~~~~~~~c~~~~~l~e~d--RilRP~G~~i~~d~~ 574 (617)
. -....++-++- |+|+|||.+++....
T Consensus 134 -----~--~~~~~~l~~l~~~~~L~pgG~l~i~~~~ 162 (202)
T 2fpo_A 134 -----R--GLLEETINLLEDNGWLADEALIYVESEV 162 (202)
T ss_dssp -----T--TTHHHHHHHHHHTTCEEEEEEEEEEEEG
T ss_pred -----C--CcHHHHHHHHHhcCccCCCcEEEEEECC
Confidence 1 12345666664 579999999998554
No 486
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=96.02 E-value=0.0069 Score=64.63 Aligned_cols=114 Identities=11% Similarity=0.138 Sum_probs=67.3
Q ss_pred HHHHHHHHHhcc----CCCCCeeeEEeccccccchh---hhccCCCeEEEEeccCCCCchhHHHHhhcc---cccccccC
Q 039518 451 QDQVRHYWQLMN----VNETEIRNAMDMNAYCGGFA---VALNSLPVWVMNIVPISMKNTLSAIYNRGI---LGAFHDWC 520 (617)
Q Consensus 451 ~~~v~~y~~~~~----~~~~~~Rn~mDm~~~~g~fa---a~l~~~~v~vmnv~p~~~~~~l~~~~~RGl---ig~~~~~~ 520 (617)
+.|...|.+.|- +-.| ..|||+|||.|-++ |..-.+.|..+-.-|. ......++-+.|+ |-+++.--
T Consensus 65 ~~Rt~aY~~Ai~~~~~~~~~--k~VLDvG~GtGiLs~~Aa~aGA~~V~ave~s~~-~~~a~~~~~~n~~~~~i~~i~~~~ 141 (376)
T 4hc4_A 65 RVRTDAYRLGILRNWAALRG--KTVLDVGAGTGILSIFCAQAGARRVYAVEASAI-WQQAREVVRFNGLEDRVHVLPGPV 141 (376)
T ss_dssp HHHHHHHHHHHHTTHHHHTT--CEEEEETCTTSHHHHHHHHTTCSEEEEEECSTT-HHHHHHHHHHTTCTTTEEEEESCT
T ss_pred HHHHHHHHHHHHhCHHhcCC--CEEEEeCCCccHHHHHHHHhCCCEEEEEeChHH-HHHHHHHHHHcCCCceEEEEeeee
Confidence 345566877652 2234 36999999999764 3333455665543221 1123345566676 44554444
Q ss_pred CCCCCCCCccchhhccccccccccCCCCCChhhHHhhhhhcccCCceEEEe
Q 039518 521 EPFSTYPRTYDLLHANHLFSHYKNRGEVCSLEDIMLEMDLIIRPQGFIIIR 571 (617)
Q Consensus 521 ~~f~typrtyDl~H~~~~~s~~~~~~~~c~~~~~l~e~dRilRP~G~~i~~ 571 (617)
+.+. .|.-+|+|=+.-+.+.. -.--.+..++-..||.|+|||.+|-+
T Consensus 142 ~~~~-lpe~~DvivsE~~~~~l---~~e~~l~~~l~a~~r~Lkp~G~~iP~ 188 (376)
T 4hc4_A 142 ETVE-LPEQVDAIVSEWMGYGL---LHESMLSSVLHARTKWLKEGGLLLPA 188 (376)
T ss_dssp TTCC-CSSCEEEEECCCCBTTB---TTTCSHHHHHHHHHHHEEEEEEEESC
T ss_pred eeec-CCccccEEEeecccccc---cccchhhhHHHHHHhhCCCCceECCc
Confidence 4443 36789987643222211 22335678899999999999998843
No 487
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=95.99 E-value=0.0046 Score=63.49 Aligned_cols=142 Identities=10% Similarity=0.054 Sum_probs=73.1
Q ss_pred eeEEeccccccchhhhccCC-CeEEEEeccCCCC-chhHHHHhh------cc----ccc-ccccCCCCCCCCCccchhhc
Q 039518 469 RNAMDMNAYCGGFAVALNSL-PVWVMNIVPISMK-NTLSAIYNR------GI----LGA-FHDWCEPFSTYPRTYDLLHA 535 (617)
Q Consensus 469 Rn~mDm~~~~g~faa~l~~~-~v~vmnv~p~~~~-~~l~~~~~R------Gl----ig~-~~~~~~~f~typrtyDl~H~ 535 (617)
++|||+|||.|+++..+.+. ++. +|+-+|-. .-+.++-++ |+ +-+ ..|..+.....+.+||+|-+
T Consensus 92 ~~VLdiG~G~G~~~~~l~~~~~~~--~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii~ 169 (296)
T 1inl_A 92 KKVLIIGGGDGGTLREVLKHDSVE--KAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVRKFKNEFDVIII 169 (296)
T ss_dssp CEEEEEECTTCHHHHHHTTSTTCS--EEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGGGCSSCEEEEEE
T ss_pred CEEEEEcCCcCHHHHHHHhcCCCC--EEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCceEEEE
Confidence 78999999999999999876 432 22222322 333333221 21 111 11221112223578999986
Q ss_pred cccccccccCCCCCChhhHHhhhhhcccCCceEEEec-----ChHHHHHHHhhhhcCCceEEEee--ccccCCCceeEEE
Q 039518 536 NHLFSHYKNRGEVCSLEDIMLEMDLIIRPQGFIIIRD-----EKSLITRIRDLAPKFLWDVELHS--LENREKKMESVLI 608 (617)
Q Consensus 536 ~~~~s~~~~~~~~c~~~~~l~e~dRilRP~G~~i~~d-----~~~~~~~~~~~~~~~~W~~~~~~--~e~~~~~~~~~l~ 608 (617)
+. +..+......-....++-++-|+|+|||.+++.- ..+....+.+..+..--.+.... ....+.+...+++
T Consensus 170 d~-~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~F~~v~~~~~~vp~~p~g~~~f~~ 248 (296)
T 1inl_A 170 DS-TDPTAGQGGHLFTEEFYQACYDALKEDGVFSAETEDPFYDIGWFKLAYRRISKVFPITRVYLGFMTTYPSGMWSYTF 248 (296)
T ss_dssp EC-----------CCSHHHHHHHHHHEEEEEEEEEECCCTTTTHHHHHHHHHHHHHHCSEEEEEEEECTTSTTSEEEEEE
T ss_pred cC-CCcccCchhhhhHHHHHHHHHHhcCCCcEEEEEccCcccCHHHHHHHHHHHHHHCCceEEEEeecCccCCCceEEEE
Confidence 53 2211000001112478889999999999999972 22333343333333323333332 1222334466888
Q ss_pred EEecc
Q 039518 609 CRKKF 613 (617)
Q Consensus 609 ~~k~~ 613 (617)
|.|++
T Consensus 249 as~~~ 253 (296)
T 1inl_A 249 ASKGI 253 (296)
T ss_dssp EESSC
T ss_pred ecCCC
Confidence 88864
No 488
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=95.98 E-value=0.0076 Score=62.00 Aligned_cols=141 Identities=13% Similarity=0.099 Sum_probs=73.4
Q ss_pred eeeEEeccccccchhhhccCC-CeEEEEeccCCCC-chhHHHHhh------cc----cc-cccccCCCCCC-CCCccchh
Q 039518 468 IRNAMDMNAYCGGFAVALNSL-PVWVMNIVPISMK-NTLSAIYNR------GI----LG-AFHDWCEPFST-YPRTYDLL 533 (617)
Q Consensus 468 ~Rn~mDm~~~~g~faa~l~~~-~v~vmnv~p~~~~-~~l~~~~~R------Gl----ig-~~~~~~~~f~t-yprtyDl~ 533 (617)
-++|||+|||.|+++..|.+. ++-- |+-.|-. .-+.++-++ ++ +- +..|..+-... -+.+||+|
T Consensus 96 ~~~VLdiG~G~G~~~~~l~~~~~~~~--v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~fDvI 173 (304)
T 3bwc_A 96 PERVLIIGGGDGGVLREVLRHGTVEH--CDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLAFVRQTPDNTYDVV 173 (304)
T ss_dssp CCEEEEEECTTSHHHHHHHTCTTCCE--EEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHSSCTTCEEEE
T ss_pred CCeEEEEcCCCCHHHHHHHhCCCCCE--EEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHHhccCCceeEE
Confidence 378999999999999999866 3321 1222222 333333222 11 11 11222211111 14789999
Q ss_pred hccccccccccCCCCCChhhHHhhhhhcccCCceEEEecC-----hHHHHHHHhhhhcCCce-EEEeec--cccCCCcee
Q 039518 534 HANHLFSHYKNRGEVCSLEDIMLEMDLIIRPQGFIIIRDE-----KSLITRIRDLAPKFLWD-VELHSL--ENREKKMES 605 (617)
Q Consensus 534 H~~~~~s~~~~~~~~c~~~~~l~e~dRilRP~G~~i~~d~-----~~~~~~~~~~~~~~~W~-~~~~~~--e~~~~~~~~ 605 (617)
-++...... ....---..++-++-|+|+|||.+++... ......+.+.++..-+. +..... ...+.+.-.
T Consensus 174 i~d~~~~~~--~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~GF~~v~~~~~~vP~yp~g~w~ 251 (304)
T 3bwc_A 174 IIDTTDPAG--PASKLFGEAFYKDVLRILKPDGICCNQGESIWLDLELIEKMSRFIRETGFASVQYALMHVPTYPCGSIG 251 (304)
T ss_dssp EEECC-----------CCHHHHHHHHHHEEEEEEEEEEECCTTTCHHHHHHHHHHHHHHTCSEEEEEECCCTTSTTSCCE
T ss_pred EECCCCccc--cchhhhHHHHHHHHHHhcCCCcEEEEecCCcccchHHHHHHHHHHHhCCCCcEEEEEeecccccCcceE
Confidence 976433211 00111114778899999999999999632 23455566655555443 333221 222234456
Q ss_pred EEEEEec
Q 039518 606 VLICRKK 612 (617)
Q Consensus 606 ~l~~~k~ 612 (617)
.+++.|.
T Consensus 252 f~~as~~ 258 (304)
T 3bwc_A 252 TLVCSKK 258 (304)
T ss_dssp EEEEESS
T ss_pred EEEEeCC
Confidence 7777774
No 489
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=95.96 E-value=0.07 Score=54.67 Aligned_cols=88 Identities=11% Similarity=0.072 Sum_probs=54.8
Q ss_pred CcEEEEecC-CCCC-CCCCCeeEEEecccccccccchHHHHHHHHHhccCCeEEEEEeCCCCCCCCCChhhHHHHHHHHH
Q 039518 275 GAMISALST-KQLP-YPSSSFEMVHCSRCRVDWHANDGILLKEVDRVLRPNGYFVYSAPPAYRKDKDYPLIWDKLVNLTT 352 (617)
Q Consensus 275 ~~~~~~~d~-~~Lp-f~d~sFDlV~~s~~l~h~~~d~~~~L~el~RvLrPGG~Liis~p~~~~~~~~~~~~W~~le~La~ 352 (617)
++.+..+++ +.+| +++++||+|+.=. ...+.....|..+...|+|||++++.+. .+ ....-+.+.++.+
T Consensus 190 ~I~li~Gda~etL~~~~~~~~d~vfIDa---D~y~~~~~~Le~~~p~L~pGGiIv~DD~--~~----~~G~~~Av~Ef~~ 260 (282)
T 2wk1_A 190 QVRFLPGWFKDTLPTAPIDTLAVLRMDG---DLYESTWDTLTNLYPKVSVGGYVIVDDY--MM----CPPCKDAVDEYRA 260 (282)
T ss_dssp TEEEEESCHHHHSTTCCCCCEEEEEECC---CSHHHHHHHHHHHGGGEEEEEEEEESSC--TT----CHHHHHHHHHHHH
T ss_pred ceEEEEeCHHHHHhhCCCCCEEEEEEcC---CccccHHHHHHHHHhhcCCCEEEEEcCC--CC----CHHHHHHHHHHHH
Confidence 478888875 3344 3457899998532 1222345689999999999999988553 11 1111234666777
Q ss_pred HcCceEEEE--eeeeEEEeec
Q 039518 353 AMCWKLIAR--KIQTAIWIKE 371 (617)
Q Consensus 353 ~~gw~~v~~--~~~~~IwqKp 371 (617)
..+++.... ....+.|+|+
T Consensus 261 ~~~i~~~i~~~~~~~v~~rk~ 281 (282)
T 2wk1_A 261 KFDIADELITIDRDGVYWQRT 281 (282)
T ss_dssp HTTCCSCCEECSSSCEEEECC
T ss_pred hcCCceEEEEecCEEEEEEeC
Confidence 777554333 3346777775
No 490
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=95.89 E-value=0.007 Score=62.59 Aligned_cols=105 Identities=15% Similarity=0.166 Sum_probs=58.5
Q ss_pred ccCCCCCeeeEEeccccccchhhhccCC--C-eEEEEeccCCCC-chhHHHHhh----ccc--ccc-cccCCCCCCCCCc
Q 039518 461 MNVNETEIRNAMDMNAYCGGFAVALNSL--P-VWVMNIVPISMK-NTLSAIYNR----GIL--GAF-HDWCEPFSTYPRT 529 (617)
Q Consensus 461 ~~~~~~~~Rn~mDm~~~~g~faa~l~~~--~-v~vmnv~p~~~~-~~l~~~~~R----Gli--g~~-~~~~~~f~typrt 529 (617)
+++..+ ..|||+|||.|+++.+|... + --| +-.|-. ..+..+-++ |+- -+. +|.. .++.++.+
T Consensus 114 l~~~~g--~~VLDlg~G~G~~t~~la~~~~~~~~v---~avD~s~~~l~~a~~~~~~~g~~~v~~~~~D~~-~~~~~~~~ 187 (315)
T 1ixk_A 114 LDPKPG--EIVADMAAAPGGKTSYLAQLMRNDGVI---YAFDVDENRLRETRLNLSRLGVLNVILFHSSSL-HIGELNVE 187 (315)
T ss_dssp HCCCTT--CEEEECCSSCSHHHHHHHHHTTTCSEE---EEECSCHHHHHHHHHHHHHHTCCSEEEESSCGG-GGGGGCCC
T ss_pred hCCCCC--CEEEEeCCCCCHHHHHHHHHhCCCCEE---EEEcCCHHHHHHHHHHHHHhCCCeEEEEECChh-hccccccc
Confidence 345555 47999999999998888642 1 222 223333 444444443 542 122 2221 22224568
Q ss_pred cchhhcccccccc---ccCCC---CCC----------hhhHHhhhhhcccCCceEEEe
Q 039518 530 YDLLHANHLFSHY---KNRGE---VCS----------LEDIMLEMDLIIRPQGFIIIR 571 (617)
Q Consensus 530 yDl~H~~~~~s~~---~~~~~---~c~----------~~~~l~e~dRilRP~G~~i~~ 571 (617)
||+|-++--.|.. ....+ +=. -..+|-++-|+|||||.+++.
T Consensus 188 fD~Il~d~Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpGG~lv~s 245 (315)
T 1ixk_A 188 FDKILLDAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYS 245 (315)
T ss_dssp EEEEEEECCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCEEEEeCCCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEE
Confidence 9999875332210 00000 000 037888999999999999995
No 491
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=95.88 E-value=0.0018 Score=67.64 Aligned_cols=93 Identities=13% Similarity=0.178 Sum_probs=60.8
Q ss_pred CeeeEEeccccccchhhhccCC----CeEEEEeccCCCCchhHHHHh-hcccccccccCCCCCCCCCccchhhccccccc
Q 039518 467 EIRNAMDMNAYCGGFAVALNSL----PVWVMNIVPISMKNTLSAIYN-RGILGAFHDWCEPFSTYPRTYDLLHANHLFSH 541 (617)
Q Consensus 467 ~~Rn~mDm~~~~g~faa~l~~~----~v~vmnv~p~~~~~~l~~~~~-RGlig~~~~~~~~f~typrtyDl~H~~~~~s~ 541 (617)
...+|||+|||.|.++.+|.+. .+.++-+ | ..+..+-+ .++-=+-+|..+++ |. ||+|.+..++.+
T Consensus 188 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~----~~~~~a~~~~~v~~~~~d~~~~~---p~-~D~v~~~~~lh~ 258 (352)
T 1fp2_A 188 GLESIVDVGGGTGTTAKIICETFPKLKCIVFDR-P----QVVENLSGSNNLTYVGGDMFTSI---PN-ADAVLLKYILHN 258 (352)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-H----HHHTTCCCBTTEEEEECCTTTCC---CC-CSEEEEESCGGG
T ss_pred cCceEEEeCCCccHHHHHHHHHCCCCeEEEeeC-H----HHHhhcccCCCcEEEeccccCCC---CC-ccEEEeehhhcc
Confidence 4579999999999999999743 2444433 2 11111111 12222334554443 44 999999999887
Q ss_pred cccCCCCCChhhHHhhhhhcccC---CceEEEec
Q 039518 542 YKNRGEVCSLEDIMLEMDLIIRP---QGFIIIRD 572 (617)
Q Consensus 542 ~~~~~~~c~~~~~l~e~dRilRP---~G~~i~~d 572 (617)
| .+. ....+|-++=|+|+| ||.++|.|
T Consensus 259 ~---~d~-~~~~~l~~~~~~L~p~~~gG~l~i~e 288 (352)
T 1fp2_A 259 W---TDK-DCLRILKKCKEAVTNDGKRGKVTIID 288 (352)
T ss_dssp S---CHH-HHHHHHHHHHHHHSGGGCCCEEEEEE
T ss_pred C---CHH-HHHHHHHHHHHhCCCCCCCcEEEEEE
Confidence 6 221 123789999999999 99999874
No 492
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=95.88 E-value=0.0079 Score=63.05 Aligned_cols=101 Identities=10% Similarity=0.100 Sum_probs=58.0
Q ss_pred CeeeEEeccccccchhhhccCC-CeEEEEeccCCCC-chhHHHHhh------cc----cc-cccccCCCCCCCC-Cccch
Q 039518 467 EIRNAMDMNAYCGGFAVALNSL-PVWVMNIVPISMK-NTLSAIYNR------GI----LG-AFHDWCEPFSTYP-RTYDL 532 (617)
Q Consensus 467 ~~Rn~mDm~~~~g~faa~l~~~-~v~vmnv~p~~~~-~~l~~~~~R------Gl----ig-~~~~~~~~f~typ-rtyDl 532 (617)
.-++|||+|||.|+++..|... ++.- |+-.|-. .-+.++-++ |+ +- +..|..+..+.++ .+||+
T Consensus 120 ~~~~VLdIG~G~G~~a~~la~~~~~~~--V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~D~~~~l~~~~~~~fDl 197 (334)
T 1xj5_A 120 NPKKVLVIGGGDGGVLREVARHASIEQ--IDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFLKNAAEGSYDA 197 (334)
T ss_dssp CCCEEEEETCSSSHHHHHHTTCTTCCE--EEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHHHHHTSCTTCEEE
T ss_pred CCCEEEEECCCccHHHHHHHHcCCCCE--EEEEECCHHHHHHHHHHHHhhccccCCCcEEEEECCHHHHHHhccCCCccE
Confidence 3479999999999999999876 3322 2222332 333333322 32 11 2233332222233 78999
Q ss_pred hhccccccccccCCCCCChhhHHhhhhhcccCCceEEEe
Q 039518 533 LHANHLFSHYKNRGEVCSLEDIMLEMDLIIRPQGFIIIR 571 (617)
Q Consensus 533 ~H~~~~~s~~~~~~~~c~~~~~l~e~dRilRP~G~~i~~ 571 (617)
|-++.. ..+. ....-....++-++-|+|+|||.+++.
T Consensus 198 Ii~d~~-~p~~-~~~~l~~~~~l~~~~~~LkpgG~lv~~ 234 (334)
T 1xj5_A 198 VIVDSS-DPIG-PAKELFEKPFFQSVARALRPGGVVCTQ 234 (334)
T ss_dssp EEECCC-CTTS-GGGGGGSHHHHHHHHHHEEEEEEEEEE
T ss_pred EEECCC-CccC-cchhhhHHHHHHHHHHhcCCCcEEEEe
Confidence 987542 1110 001100247888999999999999996
No 493
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=95.83 E-value=0.009 Score=60.54 Aligned_cols=101 Identities=8% Similarity=0.024 Sum_probs=60.2
Q ss_pred CCeeeEEeccccc---cchhhhccC--CCeEEEEeccCCCC-chhHHHHhh----ccc-ccccccCCC-----C----CC
Q 039518 466 TEIRNAMDMNAYC---GGFAVALNS--LPVWVMNIVPISMK-NTLSAIYNR----GIL-GAFHDWCEP-----F----ST 525 (617)
Q Consensus 466 ~~~Rn~mDm~~~~---g~faa~l~~--~~v~vmnv~p~~~~-~~l~~~~~R----Gli-g~~~~~~~~-----f----~t 525 (617)
..++.|||+|||. |.++..+.. ... .|+=.|-. ..|..+-++ +-+ =+-.|..+. . .+
T Consensus 76 ~~~~~vLDlGcG~pt~G~~~~~~~~~~p~~---~v~~vD~sp~~l~~Ar~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~ 152 (274)
T 2qe6_A 76 AGISQFLDLGSGLPTVQNTHEVAQSVNPDA---RVVYVDIDPMVLTHGRALLAKDPNTAVFTADVRDPEYILNHPDVRRM 152 (274)
T ss_dssp TCCCEEEEETCCSCCSSCHHHHHHHHCTTC---EEEEEESSHHHHHHHHHHHTTCTTEEEEECCTTCHHHHHHSHHHHHH
T ss_pred cCCCEEEEECCCCCCCChHHHHHHHhCCCC---EEEEEECChHHHHHHHHhcCCCCCeEEEEeeCCCchhhhccchhhcc
Confidence 3578999999999 988655532 122 22222332 444443332 111 111222211 0 12
Q ss_pred CC-CccchhhccccccccccCCCCCChhhHHhhhhhcccCCceEEEecC
Q 039518 526 YP-RTYDLLHANHLFSHYKNRGEVCSLEDIMLEMDLIIRPQGFIIIRDE 573 (617)
Q Consensus 526 yp-rtyDl~H~~~~~s~~~~~~~~c~~~~~l~e~dRilRP~G~~i~~d~ 573 (617)
+| .+||+|=+.++|-++ .+. ....+|-|+-|+|+|||++++.+.
T Consensus 153 ~d~~~~d~v~~~~vlh~~---~d~-~~~~~l~~~~~~L~pGG~l~i~~~ 197 (274)
T 2qe6_A 153 IDFSRPAAIMLVGMLHYL---SPD-VVDRVVGAYRDALAPGSYLFMTSL 197 (274)
T ss_dssp CCTTSCCEEEETTTGGGS---CTT-THHHHHHHHHHHSCTTCEEEEEEE
T ss_pred CCCCCCEEEEEechhhhC---CcH-HHHHHHHHHHHhCCCCcEEEEEEe
Confidence 33 478988887777755 333 677899999999999999999853
No 494
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=95.76 E-value=0.0024 Score=63.15 Aligned_cols=47 Identities=6% Similarity=0.141 Sum_probs=31.4
Q ss_pred CccchhhccccccccccCCC---CCChhhHHhhhhhcccCCceEEEecCh
Q 039518 528 RTYDLLHANHLFSHYKNRGE---VCSLEDIMLEMDLIIRPQGFIIIRDEK 574 (617)
Q Consensus 528 rtyDl~H~~~~~s~~~~~~~---~c~~~~~l~e~dRilRP~G~~i~~d~~ 574 (617)
..||+|-++-.|........ .-....++-++-|+|+|||++++.+..
T Consensus 167 ~~fD~Iv~npp~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 216 (250)
T 1o9g_A 167 SAPDVVLTDLPYGERTHWEGQVPGQPVAGLLRSLASALPAHAVIAVTDRS 216 (250)
T ss_dssp CCCSEEEEECCGGGSSSSSSCCCHHHHHHHHHHHHHHSCTTCEEEEEESS
T ss_pred CCceEEEeCCCeeccccccccccccHHHHHHHHHHHhcCCCcEEEEeCcc
Confidence 48999998766542200000 112347888999999999999996554
No 495
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=95.75 E-value=0.089 Score=54.19 Aligned_cols=125 Identities=14% Similarity=0.143 Sum_probs=73.2
Q ss_pred cCCCCeEEEECCCCcHHHHHhccCCCcEEEeeecCCcHHHHH---HHHHhCCC-cEEEEe-cCCCCCCCCCCeeEEEecc
Q 039518 226 SAGVFQVLDVGCGVASFSAFLLPLDIQTMSFAPKDGHENQIQ---FALERGIG-AMISAL-STKQLPYPSSSFEMVHCSR 300 (617)
Q Consensus 226 ~~~g~rVLDIGCGtG~~a~~La~~gv~~v~v~~iDis~~~lq---~A~erg~~-~~~~~~-d~~~Lpf~d~sFDlV~~s~ 300 (617)
+.++.+|||+||++|.|+.+.+.+.- +..|.++|+...--+ ..+..+-+ +.+... |+..++. ..+|+|+|--
T Consensus 92 l~~~~~VlDLGaapGGwsq~~~~~~g-v~~V~avdvG~~~he~P~~~~ql~w~lV~~~~~~Dv~~l~~--~~~D~ivcDi 168 (321)
T 3lkz_A 92 LEPVGKVIDLGCGRGGWCYYMATQKR-VQEVRGYTKGGPGHEEPQLVQSYGWNIVTMKSGVDVFYRPS--ECCDTLLCDI 168 (321)
T ss_dssp CCCCEEEEEETCTTCHHHHHHTTCTT-EEEEEEECCCSTTSCCCCCCCBTTGGGEEEECSCCTTSSCC--CCCSEEEECC
T ss_pred CCCCCEEEEeCCCCCcHHHHHHhhcC-CCEEEEEEcCCCCccCcchhhhcCCcceEEEeccCHhhCCC--CCCCEEEEEC
Confidence 45677899999999999998776632 236777787654100 00001111 444444 5556653 6699999864
Q ss_pred cccccccchH-------HHHHHHHHhccCC-eEEEEEeCCCCCCCCCChhhHHHHHHHHHHcCceEEE
Q 039518 301 CRVDWHANDG-------ILLKEVDRVLRPN-GYFVYSAPPAYRKDKDYPLIWDKLVNLTTAMCWKLIA 360 (617)
Q Consensus 301 ~l~h~~~d~~-------~~L~el~RvLrPG-G~Liis~p~~~~~~~~~~~~W~~le~La~~~gw~~v~ 360 (617)
. .. ..++. .+|.-+.+.|++| |-|++-+-. +..+..-+.++.+-...|=.++.
T Consensus 169 g-eS-s~~~~ve~~Rtl~vLel~~~wL~~~~~~f~~KVl~-----pY~~~v~e~l~~lq~~fgg~lvr 229 (321)
T 3lkz_A 169 G-ES-SSSAEVEEHRTIRVLEMVEDWLHRGPREFCVKVLC-----PYMPKVIEKMELLQRRYGGGLVR 229 (321)
T ss_dssp C-CC-CSCHHHHHHHHHHHHHHHHHHHTTCCCEEEEEESC-----TTSHHHHHHHHHHHHHHCCEEEC
T ss_pred c-cC-CCChhhhhhHHHHHHHHHHHHhccCCCcEEEEEcC-----CCChHHHHHHHHHHHHhCCEeEe
Confidence 3 22 22221 2556667889999 899886532 22333335566666666544443
No 496
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=95.74 E-value=0.011 Score=61.68 Aligned_cols=133 Identities=14% Similarity=0.148 Sum_probs=71.5
Q ss_pred eeEEeccccccchhhhccC-----CCeEEEEeccCCCCchhHHHH----hhcc--cccccccCCCCCCCCCccchhhccc
Q 039518 469 RNAMDMNAYCGGFAVALNS-----LPVWVMNIVPISMKNTLSAIY----NRGI--LGAFHDWCEPFSTYPRTYDLLHANH 537 (617)
Q Consensus 469 Rn~mDm~~~~g~faa~l~~-----~~v~vmnv~p~~~~~~l~~~~----~RGl--ig~~~~~~~~f~typrtyDl~H~~~ 537 (617)
..|||++||.|+|+..+.. ..|+-.-+-| ..+..+- ..|+ |-+.+.=.+.++.....||+|-++-
T Consensus 205 ~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~----~~i~~a~~n~~~~g~~~i~~~~~D~~~~~~~~~~~D~Ii~np 280 (354)
T 3tma_A 205 MRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDE----KRLGLAREAALASGLSWIRFLRADARHLPRFFPEVDRILANP 280 (354)
T ss_dssp CCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCH----HHHHHHHHHHHHTTCTTCEEEECCGGGGGGTCCCCSEEEECC
T ss_pred CEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCH----HHHHHHHHHHHHcCCCceEEEeCChhhCccccCCCCEEEECC
Confidence 6899999999999765543 3444332222 3333333 2343 2222111111222225689999865
Q ss_pred cccccccCCCCCC----hhhHHhhhhhcccCCceEEEecChHHHHHHHhhhhcCCceEEEee-ccccCCCceeEEEEEe
Q 039518 538 LFSHYKNRGEVCS----LEDIMLEMDLIIRPQGFIIIRDEKSLITRIRDLAPKFLWDVELHS-LENREKKMESVLICRK 611 (617)
Q Consensus 538 ~~s~~~~~~~~c~----~~~~l~e~dRilRP~G~~i~~d~~~~~~~~~~~~~~~~W~~~~~~-~e~~~~~~~~~l~~~k 611 (617)
-|..- ....-. ...++-++-|+|+|||.+++-..... -++++.+ ..|+..... ..+|.. .-.+++.+|
T Consensus 281 Pyg~r--~~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~t~~~~--~~~~~~~-~g~~~~~~~~l~~g~l-~~~i~vl~r 353 (354)
T 3tma_A 281 PHGLR--LGRKEGLFHLYWDFLRGALALLPPGGRVALLTLRPA--LLKRALP-PGFALRHARVVEQGGV-YPRVFVLEK 353 (354)
T ss_dssp CSCC------CHHHHHHHHHHHHHHHHTSCTTCEEEEEESCHH--HHHHHCC-TTEEEEEEEECCBTTB-CCEEEEEEE
T ss_pred CCcCc--cCCcccHHHHHHHHHHHHHHhcCCCcEEEEEeCCHH--HHHHHhh-cCcEEEEEEEEEeCCE-EEEEEEEEc
Confidence 55411 011111 14688899999999999988644332 2455556 777764432 223333 245666665
No 497
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=95.72 E-value=0.0018 Score=84.00 Aligned_cols=103 Identities=10% Similarity=0.190 Sum_probs=48.4
Q ss_pred CCCeEEEECCCCcHHHHHhccC----CCcEEEeeecCCcHHHHHHHHHhCC--CcEEEEecCCCC-CCCCCCeeEEEecc
Q 039518 228 GVFQVLDVGCGVASFSAFLLPL----DIQTMSFAPKDGHENQIQFALERGI--GAMISALSTKQL-PYPSSSFEMVHCSR 300 (617)
Q Consensus 228 ~g~rVLDIGCGtG~~a~~La~~----gv~~v~v~~iDis~~~lq~A~erg~--~~~~~~~d~~~L-pf~d~sFDlV~~s~ 300 (617)
+..+|||||.|+|..+..+.+. .....+++-.|++....+.|+++.. .+.....|.+.. ++..++||+|++++
T Consensus 1240 ~~~~ilEigagtg~~t~~il~~l~~~~~~~~~yt~td~s~~~~~~a~~~f~~~di~~~~~d~~~~~~~~~~~ydlvia~~ 1319 (2512)
T 2vz8_A 1240 PKMKVVEVLAGDGQLYSRIPALLNTQPVMDLDYTATDRNPQALEAAQAKLEQLHVTQGQWDPANPAPGSLGKADLLVCNC 1319 (2512)
T ss_dssp SEEEEEEESCSSSCCTTTHHHHTTTSSSCEEEEEEECSSSSSTTTTTTTHHHHTEEEECCCSSCCCC-----CCEEEEEC
T ss_pred CCceEEEECCCccHHHHHHHHhhcccCcccceEEEecCChHHHHHHHHHhhhcccccccccccccccCCCCceeEEEEcc
Confidence 4668999999999765443321 1123467777888766655555421 222222233332 34566799999988
Q ss_pred cccccccchHHHHHHHHHhccCCeEEEEEeC
Q 039518 301 CRVDWHANDGILLKEVDRVLRPNGYFVYSAP 331 (617)
Q Consensus 301 ~l~h~~~d~~~~L~el~RvLrPGG~Liis~p 331 (617)
++ |-..+....|.++.++|||||++++...
T Consensus 1320 vl-~~t~~~~~~l~~~~~lL~p~G~l~~~e~ 1349 (2512)
T 2vz8_A 1320 AL-ATLGDPAVAVGNMAATLKEGGFLLLHTL 1349 (2512)
T ss_dssp C---------------------CCEEEEEEC
T ss_pred cc-cccccHHHHHHHHHHhcCCCcEEEEEec
Confidence 66 4455788899999999999999988753
No 498
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=95.62 E-value=0.034 Score=52.72 Aligned_cols=115 Identities=12% Similarity=0.105 Sum_probs=69.5
Q ss_pred eeEEeccccccchhhhccCCCeEEEEeccCCCC-chhHHHHhh----cc-cccccccCCCCCCCCCccchhhcccccccc
Q 039518 469 RNAMDMNAYCGGFAVALNSLPVWVMNIVPISMK-NTLSAIYNR----GI-LGAFHDWCEPFSTYPRTYDLLHANHLFSHY 542 (617)
Q Consensus 469 Rn~mDm~~~~g~faa~l~~~~v~vmnv~p~~~~-~~l~~~~~R----Gl-ig~~~~~~~~f~typrtyDl~H~~~~~s~~ 542 (617)
.+|||+|||.|.|+.+|...+.- +|+-.|-. ..+..+-++ |+ +-++ +..+..+|.+||+|-++.-|...
T Consensus 51 ~~vlD~g~G~G~~~~~l~~~~~~--~v~~vD~~~~~~~~a~~~~~~~~~~~~~~---~~d~~~~~~~~D~v~~~~p~~~~ 125 (207)
T 1wy7_A 51 KVVADLGAGTGVLSYGALLLGAK--EVICVEVDKEAVDVLIENLGEFKGKFKVF---IGDVSEFNSRVDIVIMNPPFGSQ 125 (207)
T ss_dssp CEEEEETCTTCHHHHHHHHTTCS--EEEEEESCHHHHHHHHHHTGGGTTSEEEE---ESCGGGCCCCCSEEEECCCCSSS
T ss_pred CEEEEeeCCCCHHHHHHHHcCCC--EEEEEECCHHHHHHHHHHHHHcCCCEEEE---ECchHHcCCCCCEEEEcCCCccc
Confidence 58999999999999988765321 12222333 344444333 32 1111 22222346799999988877643
Q ss_pred ccCCCCCChhhHHhhhhhcccCCceEEEe-cChHHHHHHHhhhhcCCceEEEe
Q 039518 543 KNRGEVCSLEDIMLEMDLIIRPQGFIIIR-DEKSLITRIRDLAPKFLWDVELH 594 (617)
Q Consensus 543 ~~~~~~c~~~~~l~e~dRilRP~G~~i~~-d~~~~~~~~~~~~~~~~W~~~~~ 594 (617)
.. -....++-++-|+| ||.+++. ...+..+.+.+++....|++...
T Consensus 126 ---~~-~~~~~~l~~~~~~l--~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~ 172 (207)
T 1wy7_A 126 ---RK-HADRPFLLKAFEIS--DVVYSIHLAKPEVRRFIEKFSWEHGFVVTHR 172 (207)
T ss_dssp ---ST-TTTHHHHHHHHHHC--SEEEEEEECCHHHHHHHHHHHHHTTEEEEEE
T ss_pred ---cC-CchHHHHHHHHHhc--CcEEEEEeCCcCCHHHHHHHHHHCCCeEEEE
Confidence 22 22345677778888 6655544 36677777888887777776544
No 499
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=95.62 E-value=0.0032 Score=63.91 Aligned_cols=94 Identities=7% Similarity=0.174 Sum_probs=57.1
Q ss_pred eeEEeccccccchhhhccCCCeEEEEeccCCC-C-chhHHHHhh---------cc-------cc-cccccCCCCCCC---
Q 039518 469 RNAMDMNAYCGGFAVALNSLPVWVMNIVPISM-K-NTLSAIYNR---------GI-------LG-AFHDWCEPFSTY--- 526 (617)
Q Consensus 469 Rn~mDm~~~~g~faa~l~~~~v~vmnv~p~~~-~-~~l~~~~~R---------Gl-------ig-~~~~~~~~f~ty--- 526 (617)
.+|||+|||.|.++.+|..... -.|+-.|- . ..+..+-++ |+ +- ...+|.......
T Consensus 81 ~~vLDlG~G~G~~~~~~a~~~~--~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 158 (281)
T 3bzb_A 81 KTVCELGAGAGLVSIVAFLAGA--DQVVATDYPDPEILNSLESNIREHTANSCSSETVKRASPKVVPYRWGDSPDSLQRC 158 (281)
T ss_dssp CEEEETTCTTSHHHHHHHHTTC--SEEEEEECSCHHHHHHHHHHHHTTCC----------CCCEEEECCTTSCTHHHHHH
T ss_pred CeEEEecccccHHHHHHHHcCC--CEEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCCCCeEEEEecCCCccHHHHhh
Confidence 5899999999999887765542 12233333 2 334333222 22 21 225677654322
Q ss_pred --CCccchhhccccccccccCCCCCChhhHHhhhhhccc---C--CceEEE
Q 039518 527 --PRTYDLLHANHLFSHYKNRGEVCSLEDIMLEMDLIIR---P--QGFIII 570 (617)
Q Consensus 527 --prtyDl~H~~~~~s~~~~~~~~c~~~~~l~e~dRilR---P--~G~~i~ 570 (617)
+.+||+|-+..++-+. -....++-++.|+|+ | ||.+++
T Consensus 159 ~~~~~fD~Ii~~dvl~~~------~~~~~ll~~l~~~Lk~~~p~~gG~l~v 203 (281)
T 3bzb_A 159 TGLQRFQVVLLADLLSFH------QAHDALLRSVKMLLALPANDPTAVALV 203 (281)
T ss_dssp HSCSSBSEEEEESCCSCG------GGHHHHHHHHHHHBCCTTTCTTCEEEE
T ss_pred ccCCCCCEEEEeCcccCh------HHHHHHHHHHHHHhcccCCCCCCEEEE
Confidence 3789999775554321 235678999999999 9 996544
No 500
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=95.53 E-value=0.0086 Score=62.27 Aligned_cols=141 Identities=16% Similarity=0.180 Sum_probs=74.8
Q ss_pred eeEEeccccccchhhhccCC-CeEEEEeccCCCC-chhHHHHhh------cc----cc-cccccCCCCCCCCCccchhhc
Q 039518 469 RNAMDMNAYCGGFAVALNSL-PVWVMNIVPISMK-NTLSAIYNR------GI----LG-AFHDWCEPFSTYPRTYDLLHA 535 (617)
Q Consensus 469 Rn~mDm~~~~g~faa~l~~~-~v~vmnv~p~~~~-~~l~~~~~R------Gl----ig-~~~~~~~~f~typrtyDl~H~ 535 (617)
++|||+|||.|+++.++... +..- |+-.|-. .-+.++-++ |+ +- +..|..+.....+.+||+|-+
T Consensus 118 ~~VLdiG~G~G~~~~~l~~~~~~~~--v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fDvIi~ 195 (321)
T 2pt6_A 118 KNVLVVGGGDGGIIRELCKYKSVEN--IDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVIIV 195 (321)
T ss_dssp CEEEEEECTTCHHHHHHTTCTTCCE--EEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEEE
T ss_pred CEEEEEcCCccHHHHHHHHcCCCCE--EEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEccHHHHHhhcCCCceEEEE
Confidence 78999999999999999876 4322 2222332 334443332 11 11 122222222222578999987
Q ss_pred cccccccccCCCCCChhhHHhhhhhcccCCceEEEec-----ChHHHHHHHhhhhcCCceEEEeec--cccCCCceeEEE
Q 039518 536 NHLFSHYKNRGEVCSLEDIMLEMDLIIRPQGFIIIRD-----EKSLITRIRDLAPKFLWDVELHSL--ENREKKMESVLI 608 (617)
Q Consensus 536 ~~~~s~~~~~~~~c~~~~~l~e~dRilRP~G~~i~~d-----~~~~~~~~~~~~~~~~W~~~~~~~--e~~~~~~~~~l~ 608 (617)
+. +..+.. .....-..++-++-|+|+|||.+++.. ..+.+.++.+..+..--.+..... ...+.+.-..++
T Consensus 196 d~-~~p~~~-~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~F~~v~~~~~~vp~~~~g~w~f~~ 273 (321)
T 2pt6_A 196 DS-SDPIGP-AETLFNQNFYEKIYNALKPNGYCVAQCESLWIHVGTIKNMIGYAKKLFKKVEYANISIPTYPCGCIGILC 273 (321)
T ss_dssp EC-CCSSSG-GGGGSSHHHHHHHHHHEEEEEEEEEEECCTTTCHHHHHHHHHHHHTTCSEEEEEEEECTTSGGGEEEEEE
T ss_pred CC-cCCCCc-chhhhHHHHHHHHHHhcCCCcEEEEEcCCcccCHHHHHHHHHHHHHHCCCeEEEEEEeccccCceEEEEE
Confidence 53 221100 000011477889999999999999952 234444554444444334443321 122222234677
Q ss_pred EEecc
Q 039518 609 CRKKF 613 (617)
Q Consensus 609 ~~k~~ 613 (617)
+.|.+
T Consensus 274 as~~~ 278 (321)
T 2pt6_A 274 CSKTD 278 (321)
T ss_dssp EESST
T ss_pred eeCCC
Confidence 77753
Done!