BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 039522
(152 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9ZU51|RHA2B_ARATH Probable E3 ubiquitin-protein ligase RHA2B OS=Arabidopsis thaliana
GN=RHA2B PE=1 SV=2
Length = 147
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 35/50 (70%)
Query: 103 AAMECCVCLSRFQSDEEVSELSCKHFFHRGCLDKWFDNKHSTCPLCRSIL 152
AA +C VCLS+ ++ EEV +L C+H FH+ CL+ W + + CPLCRS L
Sbjct: 70 AASDCIVCLSKLKTGEEVRKLDCRHVFHKQCLEGWLQHLNFNCPLCRSPL 119
>sp|Q68DV7|RNF43_HUMAN E3 ubiquitin-protein ligase RNF43 OS=Homo sapiens GN=RNF43 PE=1
SV=1
Length = 783
Score = 61.2 bits (147), Expect = 3e-09, Method: Composition-based stats.
Identities = 29/71 (40%), Positives = 39/71 (54%), Gaps = 3/71 (4%)
Query: 80 LCDSRSSSSSTVARSN--GGSTSCSAAMECCVCLSRFQSDEEVSELSCKHFFHRGCLDKW 137
L R +S AR +SCS+A C +CL F +E+ +SC H FHR C+D W
Sbjct: 243 LATRRYQASCRQARGEWPDSGSSCSSAPVCAICLEEFSEGQELRVISCLHEFHRNCVDPW 302
Query: 138 FDNKHSTCPLC 148
++H TCPLC
Sbjct: 303 L-HQHRTCPLC 312
>sp|Q9ZT50|RHA2A_ARATH E3 ubiquitin-protein ligase RHA2A OS=Arabidopsis thaliana GN=RHA2A
PE=1 SV=1
Length = 155
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 32/47 (68%)
Query: 106 ECCVCLSRFQSDEEVSELSCKHFFHRGCLDKWFDNKHSTCPLCRSIL 152
+C VCLS+ + EEV +L C+H FH+ CL+ W + TCPLCRS L
Sbjct: 85 DCVVCLSKLKEGEEVRKLECRHVFHKKCLEGWLHQFNFTCPLCRSAL 131
>sp|Q8LDB8|RING2_ARATH E3 ubiquitin-protein ligase At1g63170 OS=Arabidopsis thaliana
GN=At1g63170 PE=2 SV=2
Length = 381
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 32/44 (72%), Gaps = 1/44 (2%)
Query: 106 ECCVCLSRFQSDEEVSELSCKHFFHRGCLDKWFDNKHSTCPLCR 149
ECC+CLS ++ + E+ EL C H FH GC+DKW ++TCPLC+
Sbjct: 324 ECCICLSAYEDETELRELPCGHHFHCGCVDKWL-YINATCPLCK 366
>sp|Q9SL78|ATL12_ARATH Putative RING-H2 finger protein ATL12 OS=Arabidopsis thaliana
GN=ATL12 PE=3 SV=1
Length = 390
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 36/49 (73%), Gaps = 4/49 (8%)
Query: 104 AMECCVCLSRFQSDEEVSEL--SCKHFFHRGCLDKWFDNKHSTCPLCRS 150
+EC VCLS+F+ D E+ L C+H FH GC+D+W + +H+TCPLCR+
Sbjct: 121 GLECSVCLSKFE-DVEILRLLPKCRHAFHIGCIDQWLE-QHATCPLCRN 167
>sp|Q5NCP0|RNF43_MOUSE E3 ubiquitin-protein ligase RNF43 OS=Mus musculus GN=Rnf43 PE=2
SV=1
Length = 784
Score = 58.2 bits (139), Expect = 2e-08, Method: Composition-based stats.
Identities = 23/50 (46%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
Query: 99 TSCSAAMECCVCLSRFQSDEEVSELSCKHFFHRGCLDKWFDNKHSTCPLC 148
+SCS+ C +CL F +E+ +SC H FHR C+D W +H TCPLC
Sbjct: 264 SSCSSTPVCAICLEEFSEGQELRVISCLHEFHRTCVDPWL-YQHRTCPLC 312
>sp|Q8L9T5|ATL2_ARATH RING-H2 finger protein ATL2 OS=Arabidopsis thaliana GN=ATL2 PE=2
SV=2
Length = 304
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 33/50 (66%), Gaps = 2/50 (4%)
Query: 104 AMECCVCLSRFQSDEEVSELS-CKHFFHRGCLDKWFDNKHSTCPLCRSIL 152
+EC VCLS F+ E L C+H FH C+D WF + HSTCPLCRS++
Sbjct: 116 PIECAVCLSEFEESETGRVLPNCQHTFHVDCIDMWF-HSHSTCPLCRSLV 164
>sp|Q7ZW78|RN181_DANRE E3 ubiquitin-protein ligase RNF181 OS=Danio rerio GN=rnf181 PE=2
SV=2
Length = 156
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 60/124 (48%), Gaps = 26/124 (20%)
Query: 26 ALLKNMVRSLLQGMGAASDSSSSNVEDESDGFISSNSEDDNARERRISVTQFKSLCDSRS 85
ALL+ + RSL+QG+ I S S D + ++R+ K++ S
Sbjct: 23 ALLE-LARSLMQGLD-----------------IDSGSFDLSDWDQRLPPPAAKAVVQSLP 64
Query: 86 SSSSTVARSNGGSTSCSAAMECCVCLSRFQSDEEVSELSCKHFFHRGCLDKWFDNKHSTC 145
+ +++ G ++C VCL F+ E V E+ CKH FH GC+ W NK ++C
Sbjct: 65 VVIISPEQADKG-------VKCPVCLLEFEEQESVREMPCKHLFHTGCILPWL-NKTNSC 116
Query: 146 PLCR 149
PLCR
Sbjct: 117 PLCR 120
>sp|Q9P7E1|YOF7_SCHPO Uncharacterized RING finger protein P4H10.07 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=SPBP4H10.07 PE=1 SV=1
Length = 583
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 31/45 (68%), Gaps = 1/45 (2%)
Query: 107 CCVCLSRFQSDEEVSEL-SCKHFFHRGCLDKWFDNKHSTCPLCRS 150
C VCLS F+ ++E L C HFFHR C+D+W + ++CPLCR+
Sbjct: 525 CLVCLSNFELNDECRRLKQCNHFFHRECIDQWLTSSQNSCPLCRT 569
>sp|Q5EAE9|ATL43_ARATH RING-H2 finger protein ATL43 OS=Arabidopsis thaliana GN=ATL43 PE=2
SV=2
Length = 407
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 31/47 (65%), Gaps = 2/47 (4%)
Query: 104 AMECCVCLSRFQSDEEVSEL-SCKHFFHRGCLDKWFDNKHSTCPLCR 149
+EC VCL+RF+ E + L CKH FH C+D W D HSTCPLCR
Sbjct: 143 GLECAVCLARFEPTEVLRLLPKCKHAFHVECVDTWLD-AHSTCPLCR 188
>sp|Q9SUS5|RHA1B_ARATH E3 ubiquitin-protein ligase RHA1B OS=Arabidopsis thaliana GN=RHA1B
PE=2 SV=1
Length = 157
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 71/155 (45%), Gaps = 30/155 (19%)
Query: 1 MGLSNFPSAAEGLLPGLVMNTVLSVALLKNMVRSLLQGMGAAS--DSSSSNVEDESDGFI 58
MGL E +PG V+ T+ + ++MV +L +G S D + ++ D + +
Sbjct: 1 MGLPT--DFKELQIPGYVLKTLYVIGFFRDMVDALCPYIGLPSFLDHNETSRSDPTRLAL 58
Query: 59 SSNSEDDNARERRISVTQFKSLCDSRSSSSSTVARSNGGSTSCSAAMECC-VCLSRFQSD 117
S+++ N I V +F L + +CC VCLS F SD
Sbjct: 59 STSATLAN---ELIPVVRFSDLL--------------------TDPEDCCTVCLSDFVSD 95
Query: 118 EEVSELS-CKHFFHRGCLDKWF-DNKHSTCPLCRS 150
+++ +L C H FH CLD+W D TCP+CR+
Sbjct: 96 DKIRQLPKCGHVFHHRCLDRWIVDCNKITCPICRN 130
>sp|Q5XF85|ATL42_ARATH E3 ubiquitin-protein ligase ATL42 OS=Arabidopsis thaliana GN=ATL42
PE=1 SV=2
Length = 432
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 35/47 (74%), Gaps = 2/47 (4%)
Query: 104 AMECCVCLSRFQSDEEVSEL-SCKHFFHRGCLDKWFDNKHSTCPLCR 149
++C VCLS+F+S E + L C+H FH GC+D+W + +H+TCPLCR
Sbjct: 120 GLDCSVCLSKFESVEILRLLPKCRHAFHIGCIDQWLE-QHATCPLCR 165
>sp|Q84W40|ATL11_ARATH RING-H2 finger protein ATL11 OS=Arabidopsis thaliana GN=ATL11 PE=2
SV=2
Length = 404
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 33/50 (66%), Gaps = 2/50 (4%)
Query: 104 AMECCVCLSRFQSDEEVSELS-CKHFFHRGCLDKWFDNKHSTCPLCRSIL 152
A+EC VCL+ F+ DE + + C H FH GC+D W H+TCPLCR+ L
Sbjct: 141 ALECSVCLNEFEDDETLRLIPKCCHVFHPGCIDAWL-RSHTTCPLCRADL 189
>sp|Q8WVZ7|RN133_HUMAN E3 ubiquitin-protein ligase RNF133 OS=Homo sapiens GN=RNF133 PE=2
SV=1
Length = 376
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 29/43 (67%), Gaps = 1/43 (2%)
Query: 107 CCVCLSRFQSDEEVSELSCKHFFHRGCLDKWFDNKHSTCPLCR 149
C +C R++ ++ V L+CKHFFH+ C+D W H TCP+C+
Sbjct: 256 CVICFERYKPNDIVRILTCKHFFHKNCIDPWIL-PHGTCPICK 297
>sp|Q8LF65|ATL17_ARATH RING-H2 finger protein ATL17 OS=Arabidopsis thaliana GN=ATL17 PE=2
SV=2
Length = 235
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 34/48 (70%), Gaps = 2/48 (4%)
Query: 104 AMECCVCLSRFQSDEEVSEL-SCKHFFHRGCLDKWFDNKHSTCPLCRS 150
AMEC VCLS F+ +E + +CKH FH C+D WF + HS+CPLCRS
Sbjct: 73 AMECSVCLSEFKDNESGRVMPNCKHTFHVHCIDMWF-HSHSSCPLCRS 119
>sp|Q14B02|RN133_MOUSE E3 ubiquitin-protein ligase RNF133 OS=Mus musculus GN=Rnf133 PE=1
SV=1
Length = 382
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
Query: 107 CCVCLSRFQSDEEVSELSCKHFFHRGCLDKWFDNKHSTCPLCR 149
C +C ++ +E V L+CKHFFH+ C+D W H TCP+C+
Sbjct: 256 CVICFEAYKPNEIVRILTCKHFFHKNCIDPWIL-AHGTCPMCK 297
>sp|Q8SV35|Y733_ENCCU Uncharacterized RING finger protein ECU07_0330 OS=Encephalitozoon
cuniculi (strain GB-M1) GN=ECU07_0330 PE=4 SV=1
Length = 314
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 29/47 (61%)
Query: 106 ECCVCLSRFQSDEEVSELSCKHFFHRGCLDKWFDNKHSTCPLCRSIL 152
EC +C+S F ++ + L C H FH GC+DKW + CP+CR+ +
Sbjct: 268 ECAICMSNFIKNQRLRVLPCDHRFHVGCVDKWLLGHSNKCPVCRTAI 314
>sp|Q6AY01|RN133_RAT E3 ubiquitin-protein ligase RNF133 OS=Rattus norvegicus GN=Rnf133
PE=2 SV=1
Length = 381
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
Query: 107 CCVCLSRFQSDEEVSELSCKHFFHRGCLDKWFDNKHSTCPLCR 149
C +C ++ +E V L+CKHFFH+ C+D W H TCP+C+
Sbjct: 256 CVICFEAYKPNEIVRILTCKHFFHKNCIDPWIL-AHGTCPMCK 297
>sp|Q84TF5|RHA4A_ARATH RING-H2 zinc finger protein RHA4a OS=Arabidopsis thaliana GN=RHA4A
PE=2 SV=1
Length = 174
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 24/45 (53%), Positives = 29/45 (64%), Gaps = 2/45 (4%)
Query: 107 CCVCLSRFQSDEEVSELS-CKHFFHRGCLDKWFDNKHSTCPLCRS 150
CCVCL F+ EE+ E+ CKH FH C+ W H+TCPLCRS
Sbjct: 105 CCVCLGEFELKEELVEMPLCKHIFHLDCIHLWL-YSHNTCPLCRS 148
>sp|Q9LN71|RING1_ARATH E3 ubiquitin-protein ligase At1g12760 OS=Arabidopsis thaliana
GN=At1g12760 PE=2 SV=1
Length = 408
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 30/44 (68%), Gaps = 1/44 (2%)
Query: 106 ECCVCLSRFQSDEEVSELSCKHFFHRGCLDKWFDNKHSTCPLCR 149
ECC+CLS ++ E+ EL C H FH C+DKW ++TCPLC+
Sbjct: 352 ECCICLSAYEDGTELRELPCGHHFHCSCVDKWL-YINATCPLCK 394
>sp|Q8RXD3|AIP2_ARATH E3 ubiquitin-protein ligase AIP2 OS=Arabidopsis thaliana GN=AIP2
PE=1 SV=1
Length = 310
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Query: 103 AAMECCVCLSRFQSDEEVSELSCKHFFHRGCLDKWFDNKHSTCPLCRSIL 152
A ECC+C +++ EL CKH FH CL W D +H++CP+CR L
Sbjct: 226 AEAECCICKENLVIGDKMQELPCKHTFHPPCLKPWLD-EHNSCPICRHEL 274
>sp|Q9SK92|ATL15_ARATH E3 ubiquitin-protein ligase ATL15 OS=Arabidopsis thaliana GN=ATL15
PE=1 SV=1
Length = 381
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 34/50 (68%), Gaps = 2/50 (4%)
Query: 104 AMECCVCLSRFQSDEEVSELS-CKHFFHRGCLDKWFDNKHSTCPLCRSIL 152
A+EC VCL+ F+ DE + + C H FH GC+D W ++ +TCPLCR+ L
Sbjct: 115 ALECPVCLNEFEDDETLRLIPQCCHVFHPGCIDAWLRSQ-TTCPLCRANL 163
>sp|Q95K04|RN133_MACFA E3 ubiquitin-protein ligase RNF133 OS=Macaca fascicularis GN=RNF133
PE=2 SV=1
Length = 376
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 29/43 (67%), Gaps = 1/43 (2%)
Query: 107 CCVCLSRFQSDEEVSELSCKHFFHRGCLDKWFDNKHSTCPLCR 149
C +C ++ ++ V L+CKHFFH+ C+D W + H TCP+C+
Sbjct: 256 CVICFEHYKPNDIVRILTCKHFFHKNCIDPWILS-HGTCPICK 297
>sp|P87237|YC0C_SCHPO Uncharacterized RING finger protein C4G3.12c OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=SPCC4G3.12c PE=4 SV=1
Length = 821
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 49/93 (52%), Gaps = 6/93 (6%)
Query: 64 DDNARERRISVTQFKSLCDSRSSSSSTVARSNG-----GSTSCSAAMECCVCLSRFQSDE 118
D+ E +++T + +S V RS G S S+A C +CL + + +
Sbjct: 718 DNPMYEDLLALTTYLGPAKKPVASHEDVKRSGGLFAYFDDASLSSADSCLICLETYTNGD 777
Query: 119 EVSEL-SCKHFFHRGCLDKWFDNKHSTCPLCRS 150
+L +CKHFFH+ C+D+W +++CPLCR+
Sbjct: 778 ICRKLQACKHFFHQACIDQWLTTGNNSCPLCRA 810
>sp|Q6NRX0|RN149_XENLA E3 ubiquitin-protein ligase RNF149 OS=Xenopus laevis GN=rnf149 PE=2
SV=1
Length = 397
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Query: 104 AMECCVCLSRFQSDEEVSELSCKHFFHRGCLDKWFDNKHSTCPLCR 149
A C VC+ +++ + V L CKH FHR C+D W +H TCP+C+
Sbjct: 261 AENCAVCIENYKTKDLVRILPCKHIFHRLCIDPWLI-EHRTCPMCK 305
>sp|Q8RXX9|ATL6_ARATH E3 ubiquitin-protein ligase ATL6 OS=Arabidopsis thaliana GN=ATL6
PE=1 SV=2
Length = 398
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 31/49 (63%), Gaps = 2/49 (4%)
Query: 105 MECCVCLSRFQSDEEVSELS-CKHFFHRGCLDKWFDNKHSTCPLCRSIL 152
+EC +CL+ F+ DE + L C H FH C+D W + H TCP+CR+ L
Sbjct: 126 LECAICLNEFEDDETLRLLPKCDHVFHPHCIDAWLE-AHVTCPVCRANL 173
>sp|Q8N7C7|RN148_HUMAN RING finger protein 148 OS=Homo sapiens GN=RNF148 PE=2 SV=2
Length = 305
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
Query: 107 CCVCLSRFQSDEEVSELSCKHFFHRGCLDKWFDNKHSTCPLCR 149
C VC ++ + V L+CKHFFH+ C+D W H TCP+C+
Sbjct: 258 CVVCFDTYKPQDVVRILTCKHFFHKACIDPWLL-AHRTCPMCK 299
>sp|Q6DIP3|RN126_XENTR RING finger protein 126 OS=Xenopus tropicalis GN=rnf126 PE=2 SV=1
Length = 311
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 62/136 (45%), Gaps = 11/136 (8%)
Query: 25 VALLKNMVRSLLQGMGAASDSSSSNVEDESDGFISSNSED----DNARERRIS--VTQFK 78
V L+ +++ L+ G+ A + + SN+ G + SN D N + I+ + QF+
Sbjct: 139 VPTLEGIIQQLVNGIIAPT--AMSNLGVGPWGVLHSNPMDYAWGANGLDTIITQLLNQFE 196
Query: 79 SLCDSRSSSSSTVARSNGGSTS--CSAAMECCVCLSRFQSDEEVSELSCKHFFHRGCLDK 136
+ + + A T + +EC VC + E V +L C H FH C+
Sbjct: 197 NTGPPPADTEKIQALPTIQITEEHVGSGLECPVCKEDYTVGESVRQLPCNHLFHNDCIIP 256
Query: 137 WFDNKHSTCPLCRSIL 152
W + +H TCP+CR L
Sbjct: 257 WLE-QHDTCPVCRKSL 271
>sp|Q6GPV5|RN181_XENLA E3 ubiquitin-protein ligase RNF181 OS=Xenopus laevis GN=rnf181 PE=2
SV=1
Length = 156
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 55/125 (44%), Gaps = 25/125 (20%)
Query: 28 LKNMVRSLLQGMGAASDSSSSNVEDESDGFISSNSEDDNARERRISVTQFKSLCDSRSSS 87
L + RSLL GM I + D ++R+ K + +S
Sbjct: 24 LLELARSLLSGMD-----------------IDLGAVDFTEWDQRLPPPASKKVVESLPKV 66
Query: 88 SSTVARSNGGSTSCSAAMECCVCLSRFQSDEEVSELSCKHFFHRGCLDKWFDNKHSTCPL 147
+ T +++ AA++C VCL F+ E V +L C+H FH C+ W K ++CPL
Sbjct: 67 TVTPEQAD-------AALKCPVCLLEFEEGETVRQLPCEHLFHSACILPWL-GKTNSCPL 118
Query: 148 CRSIL 152
CR L
Sbjct: 119 CRHEL 123
>sp|Q3U2C5|RN149_MOUSE E3 ubiquitin-protein ligase RNF149 OS=Mus musculus GN=Rnf149 PE=2
SV=3
Length = 394
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Query: 104 AMECCVCLSRFQSDEEVSELSCKHFFHRGCLDKWFDNKHSTCPLCR 149
A C VC+ F+ + + L CKH FHR C+D W + H TCP+C+
Sbjct: 262 AENCAVCIENFKVKDVIRILPCKHIFHRICIDPWLLD-HRTCPMCK 306
>sp|Q5M974|RN181_XENTR E3 ubiquitin-protein ligase RNF181 OS=Xenopus tropicalis GN=rnf181
PE=2 SV=1
Length = 156
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 55/125 (44%), Gaps = 25/125 (20%)
Query: 28 LKNMVRSLLQGMGAASDSSSSNVEDESDGFISSNSEDDNARERRISVTQFKSLCDSRSSS 87
L + RSLL GM I + D ++R+ K + +S
Sbjct: 24 LLELARSLLSGMD-----------------IDLGALDFTEWDQRLPPPAAKKVVESLPKV 66
Query: 88 SSTVARSNGGSTSCSAAMECCVCLSRFQSDEEVSELSCKHFFHRGCLDKWFDNKHSTCPL 147
+ T +++ AA++C VCL F+ E V +L C+H FH C+ W K ++CPL
Sbjct: 67 TVTPEQAD-------AALKCPVCLLEFEEGETVRQLPCEHLFHSSCILPWL-GKTNSCPL 118
Query: 148 CRSIL 152
CR L
Sbjct: 119 CRHEL 123
>sp|Q9Y4L5|RN115_HUMAN E3 ubiquitin-protein ligase RNF115 OS=Homo sapiens GN=RNF115 PE=1
SV=2
Length = 304
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 104 AMECCVCLSRFQSDEEVSELSCKHFFHRGCLDKWFDNKHSTCPLCRSIL 152
+EC VC + +EEV +L C HFFH C+ W + H TCP+CR L
Sbjct: 225 GLECPVCKEDYTVEEEVRQLPCNHFFHSSCIVPWLE-LHDTCPVCRKSL 272
>sp|Q8NC42|RN149_HUMAN E3 ubiquitin-protein ligase RNF149 OS=Homo sapiens GN=RNF149 PE=2
SV=2
Length = 400
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Query: 104 AMECCVCLSRFQSDEEVSELSCKHFFHRGCLDKWFDNKHSTCPLCR 149
A C VC+ F+ + + L CKH FHR C+D W + H TCP+C+
Sbjct: 266 AENCAVCIENFKVKDIIRILPCKHIFHRICIDPWLLD-HRTCPMCK 310
>sp|G3X9R7|RN148_MOUSE RING finger protein 148 OS=Mus musculus GN=Rnf148 PE=2 SV=1
Length = 316
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
Query: 107 CCVCLSRFQSDEEVSELSCKHFFHRGCLDKWFDNKHSTCPLCR 149
C VC +++ + + L+CKHFFH+ C+D W H TCP+C+
Sbjct: 269 CVVCFDMYKAQDVIRILTCKHFFHKTCIDPWLL-AHRTCPMCK 310
>sp|Q6Y290|GOLI_RAT E3 ubiquitin-protein ligase RNF130 OS=Rattus norvegicus GN=Rnf130
PE=1 SV=1
Length = 419
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Query: 106 ECCVCLSRFQSDEEVSELSCKHFFHRGCLDKWFDNKHSTCPLCR 149
C VC+ ++ ++ V L CKH FH+ C+D W ++H TCP+C+
Sbjct: 263 HCAVCIESYKQNDVVRVLPCKHVFHKSCVDPWL-SEHCTCPMCK 305
>sp|Q8VEM1|GOLI_MOUSE E3 ubiquitin-protein ligase RNF130 OS=Mus musculus GN=Rnf130 PE=2
SV=1
Length = 419
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Query: 106 ECCVCLSRFQSDEEVSELSCKHFFHRGCLDKWFDNKHSTCPLCR 149
C VC+ ++ ++ V L CKH FH+ C+D W ++H TCP+C+
Sbjct: 263 HCAVCIESYKQNDVVRVLPCKHVFHKSCVDPWL-SEHCTCPMCK 305
>sp|Q6IRP0|R126B_XENLA RING finger protein 126-B OS=Xenopus laevis GN=rnf126-b PE=2 SV=1
Length = 312
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 61/136 (44%), Gaps = 11/136 (8%)
Query: 25 VALLKNMVRSLLQGMGAASDSSSSNVEDESDGFISSNSED----DNARERRIS--VTQFK 78
V L+ +++ L+ G+ A + + SN+ G + SN D N + I+ + QF+
Sbjct: 140 VPTLEGIIQQLVNGIIAPT--AMSNLGVGPWGVLHSNPMDYAWGANGLDTIITQLLNQFE 197
Query: 79 SLCDSRSSSSSTVARSNGGSTS--CSAAMECCVCLSRFQSDEEVSELSCKHFFHRGCLDK 136
+ + + A T +EC VC + E V +L C H FH C+
Sbjct: 198 NTGPPPADTDKIQALPTIQITEEHVGFGLECPVCKEDYTVGESVRQLPCNHLFHNDCIIP 257
Query: 137 WFDNKHSTCPLCRSIL 152
W + +H TCP+CR L
Sbjct: 258 WLE-QHDTCPVCRKSL 272
>sp|Q9FKX5|NIPL1_ARATH NEP1-interacting protein-like 1 OS=Arabidopsis thaliana GN=ATL27
PE=2 SV=1
Length = 221
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Query: 105 MECCVCLSRFQSDEEVSELS-CKHFFHRGCLDKWFDNKHSTCPLCR 149
+ C VCL FQ E V L C H FH C+DKW +H++CPLCR
Sbjct: 174 VSCSVCLQDFQVGETVRSLPHCHHMFHLPCIDKWL-RRHASCPLCR 218
>sp|Q93Z92|RING4_ARATH E3 ubiquitin-protein ligase At4g11680 OS=Arabidopsis thaliana
GN=At4g11680 PE=2 SV=1
Length = 390
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Query: 106 ECCVCLSRFQSDEEVSELSCKHFFHRGCLDKWFDNKHSTCPLCR 149
ECC+CL ++ E+ EL C H FH C+DKW + +S CPLC+
Sbjct: 337 ECCICLCEYEDGVELRELPCNHHFHCTCIDKWL-HINSRCPLCK 379
>sp|Q86XS8|GOLI_HUMAN E3 ubiquitin-protein ligase RNF130 OS=Homo sapiens GN=RNF130 PE=1
SV=1
Length = 419
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Query: 106 ECCVCLSRFQSDEEVSELSCKHFFHRGCLDKWFDNKHSTCPLCR 149
C VC+ ++ ++ V L CKH FH+ C+D W ++H TCP+C+
Sbjct: 263 HCAVCIESYKQNDVVRILPCKHVFHKSCVDPWL-SEHCTCPMCK 305
>sp|Q9SRQ8|ATL51_ARATH RING-H2 finger protein ATL51 OS=Arabidopsis thaliana GN=ATL51 PE=2
SV=2
Length = 356
Score = 52.8 bits (125), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 30/48 (62%), Gaps = 2/48 (4%)
Query: 106 ECCVCLSRFQSDEEVSELS-CKHFFHRGCLDKWFDNKHSTCPLCRSIL 152
+C VCLS FQ +E + L C H FH C+D W + HS CPLCR+ +
Sbjct: 158 DCSVCLSEFQENESLRLLPKCNHAFHVPCIDTWLKS-HSNCPLCRAFI 204
>sp|Q8AWW4|RN128_XENLA E3 ubiquitin-protein ligase RNF128 OS=Xenopus laevis GN=rnf128 PE=2
SV=2
Length = 404
Score = 52.8 bits (125), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
Query: 107 CCVCLSRFQSDEEVSELSCKHFFHRGCLDKWFDNKHSTCPLCR 149
C VC+ ++ + V L+C HFFH+ C+D W +H TCP+C+
Sbjct: 260 CAVCIEPYKPSDVVRILTCNHFFHKNCIDPWL-LEHRTCPMCK 301
>sp|Q9LSW9|ATL16_ARATH RING-H2 finger protein ATL16 OS=Arabidopsis thaliana GN=ATL16 PE=2
SV=1
Length = 375
Score = 52.8 bits (125), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 42/82 (51%), Gaps = 6/82 (7%)
Query: 70 RRISVTQFKSLCDSRSSSSSTVARSNGGSTSCSAAMECCVCLSRFQSDEEVSEL-SCKHF 128
R I + +FK R + V G + EC VCLS FQ +E++ + +C H
Sbjct: 105 RAIPIFKFKK----RYDQNDGVFTGEGEEEEEKRSQECSVCLSEFQDEEKLRIIPNCSHL 160
Query: 129 FHRGCLDKWFDNKHSTCPLCRS 150
FH C+D W N ++ CPLCR+
Sbjct: 161 FHIDCIDVWLQN-NANCPLCRT 181
>sp|Q0II22|RN126_BOVIN RING finger protein 126 OS=Bos taurus GN=RNF126 PE=2 SV=1
Length = 313
Score = 52.8 bits (125), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 61/136 (44%), Gaps = 11/136 (8%)
Query: 25 VALLKNMVRSLLQGMGAASDSSSSNVEDESDGFISSNSED----DNARERRIS--VTQFK 78
V L+ +++ L+ G+ + ++ N+ G + SN D N + I+ + QF+
Sbjct: 144 VPTLEGIIQQLVNGI--ITPATIPNLGLGPWGVLHSNPMDYAWGANGLDAIITQLLNQFE 201
Query: 79 SLCDSRSSSSSTVARSNGGSTS--CSAAMECCVCLSRFQSDEEVSELSCKHFFHRGCLDK 136
+ + A T + +EC VC + E V +L C H FH GC+
Sbjct: 202 NTGPPPADKEKIQALPTVPVTEEHVGSGLECPVCKDDYGLGEHVRQLPCNHLFHDGCIVP 261
Query: 137 WFDNKHSTCPLCRSIL 152
W + +H +CP+CR L
Sbjct: 262 WLE-QHDSCPVCRKSL 276
>sp|Q5SSZ7|ZNRF3_MOUSE E3 ubiquitin-protein ligase ZNRF3 OS=Mus musculus GN=Znrf3 PE=2
SV=1
Length = 913
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 44/84 (52%), Gaps = 7/84 (8%)
Query: 71 RISVTQFKSLCDSRSSSSSTVARSNGG-----STSCSAAMECCVCLSRFQSDEEVSELSC 125
R++V + + ++R +S + R G + S + +C +CL ++ EE+ + C
Sbjct: 250 RLAVQALEKM-ETRKFNSKSKGRREGSCGALDTLSSGSTSDCAICLEKYIDGEELRVIPC 308
Query: 126 KHFFHRGCLDKWFDNKHSTCPLCR 149
H FHR C+D W +H TCP CR
Sbjct: 309 THRFHRKCVDPWL-LQHHTCPHCR 331
>sp|Q9SN28|ATL7_ARATH RING-H2 finger protein ATL7 OS=Arabidopsis thaliana GN=ATL7 PE=2
SV=1
Length = 236
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 31/45 (68%), Gaps = 2/45 (4%)
Query: 106 ECCVCLSRFQSDEEVSEL-SCKHFFHRGCLDKWFDNKHSTCPLCR 149
+C VCL +Q++E++ ++ SC H FH C+D W H+TCPLCR
Sbjct: 110 QCSVCLGDYQAEEKLQQMPSCGHTFHMECIDLWL-TSHTTCPLCR 153
>sp|Q9SN27|ATL59_ARATH E3 ubiquitin-protein ligase ATL59 OS=Arabidopsis thaliana GN=ATL59
PE=1 SV=1
Length = 225
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 31/45 (68%), Gaps = 2/45 (4%)
Query: 106 ECCVCLSRFQSDEEVSEL-SCKHFFHRGCLDKWFDNKHSTCPLCR 149
+C VCL +Q++E++ ++ SC H FH C+D W H+TCPLCR
Sbjct: 96 QCSVCLGDYQAEEKLQQMPSCGHTFHMECIDLWL-TSHTTCPLCR 139
>sp|Q8LGA5|ATL31_ARATH E3 ubiquitin-protein ligase ATL31 OS=Arabidopsis thaliana GN=ATL31
PE=1 SV=2
Length = 368
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 30/51 (58%), Gaps = 2/51 (3%)
Query: 103 AAMECCVCLSRFQSDEEVSELS-CKHFFHRGCLDKWFDNKHSTCPLCRSIL 152
A+EC +CL+ F+ DE + L C H FH C+ W H TCP+CR+ L
Sbjct: 120 GALECAICLNEFEDDETLRLLPKCDHVFHPHCIGAWLQG-HVTCPVCRTNL 169
>sp|Q9D0C1|RN115_MOUSE E3 ubiquitin-protein ligase RNF115 OS=Mus musculus GN=Rnf115 PE=1
SV=1
Length = 305
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Query: 102 SAAMECCVCLSRFQSDEEVSELSCKHFFHRGCLDKWFDNKHSTCPLCRSIL 152
+ +EC VC + +E+V +L C HFFH C+ W + H TCP+CR L
Sbjct: 224 NTGLECPVCKEDYTVEEKVRQLPCNHFFHSSCIVPWLE-LHDTCPVCRKSL 273
>sp|Q9BV68|RN126_HUMAN RING finger protein 126 OS=Homo sapiens GN=RNF126 PE=1 SV=1
Length = 326
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Query: 103 AAMECCVCLSRFQSDEEVSELSCKHFFHRGCLDKWFDNKHSTCPLCRSIL 152
+ +EC VC + E V +L C H FH GC+ W + +H +CP+CR L
Sbjct: 225 SGLECPVCKDDYALGERVRQLPCNHLFHDGCIVPWLE-QHDSCPVCRKSL 273
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.126 0.369
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 49,282,835
Number of Sequences: 539616
Number of extensions: 1609666
Number of successful extensions: 9401
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 253
Number of HSP's successfully gapped in prelim test: 411
Number of HSP's that attempted gapping in prelim test: 8422
Number of HSP's gapped (non-prelim): 1074
length of query: 152
length of database: 191,569,459
effective HSP length: 107
effective length of query: 45
effective length of database: 133,830,547
effective search space: 6022374615
effective search space used: 6022374615
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 56 (26.2 bits)