Query 039524
Match_columns 331
No_of_seqs 201 out of 1191
Neff 8.3
Searched_HMMs 29240
Date Mon Mar 25 18:10:28 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/039524.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/039524hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1gp6_A Leucoanthocyanidin diox 100.0 1.2E-79 4.1E-84 581.1 26.5 319 1-322 13-351 (356)
2 3oox_A Putative 2OG-Fe(II) oxy 100.0 9.5E-76 3.3E-80 545.7 26.8 288 24-316 2-309 (312)
3 1w9y_A 1-aminocyclopropane-1-c 100.0 3E-76 1E-80 549.7 19.1 291 27-328 2-306 (319)
4 1dcs_A Deacetoxycephalosporin 100.0 1.4E-71 4.8E-76 517.1 17.1 277 26-318 2-307 (311)
5 1odm_A Isopenicillin N synthas 100.0 3E-70 1E-74 512.4 24.5 276 26-317 6-325 (331)
6 3on7_A Oxidoreductase, iron/as 100.0 1.4E-66 4.7E-71 476.5 24.1 260 27-316 2-277 (280)
7 3dkq_A PKHD-type hydroxylase S 94.0 0.039 1.3E-06 48.4 4.0 80 180-279 99-195 (243)
8 2rg4_A Uncharacterized protein 92.5 1.8 6.1E-05 36.9 12.1 43 227-281 166-209 (216)
9 2hbt_A EGL nine homolog 1; pro 88.2 0.95 3.2E-05 39.6 6.6 183 42-279 15-213 (247)
10 2iuw_A Alkylated repair protei 82.8 4.5 0.00015 34.9 8.2 86 181-278 127-229 (238)
11 2jig_A Prolyl-4 hydroxylase; h 81.8 3.3 0.00011 35.2 6.9 48 229-280 170-218 (224)
12 3i3q_A Alpha-ketoglutarate-dep 81.7 9.2 0.00031 32.4 9.5 81 181-277 106-201 (211)
13 3s57_A Alpha-ketoglutarate-dep 80.5 3.6 0.00012 34.7 6.5 42 227-276 157-200 (204)
14 3itq_A Prolyl 4-hydroxylase, a 80.0 5.5 0.00019 33.9 7.6 104 154-279 94-212 (216)
15 3tht_A Alkylated DNA repair pr 73.9 4.1 0.00014 37.4 5.3 94 180-281 198-315 (345)
16 2opi_A L-fuculose-1-phosphate 64.0 4 0.00014 34.5 2.9 36 28-63 125-160 (212)
17 2fk5_A Fuculose-1-phosphate al 58.3 6.5 0.00022 32.9 3.1 37 27-63 116-153 (200)
18 1pvt_A Sugar-phosphate aldolas 57.7 7 0.00024 33.6 3.3 37 27-63 160-196 (238)
19 1e4c_P L-fuculose 1-phosphate 57.2 6.2 0.00021 33.4 2.9 37 27-63 121-157 (215)
20 2v9l_A Rhamnulose-1-phosphate 51.5 7.6 0.00026 34.2 2.5 36 28-63 179-214 (274)
21 3o2g_A Gamma-butyrobetaine dio 46.5 11 0.00037 35.0 2.9 51 28-81 122-173 (388)
22 1otj_A Alpha-ketoglutarate-dep 45.2 18 0.00062 31.6 4.0 52 26-80 15-66 (283)
23 2dbn_A Hypothetical protein YB 42.5 7.3 0.00025 36.9 1.0 55 25-80 97-151 (461)
24 2irp_A Putative aldolase class 39.6 13 0.00045 31.0 2.1 36 27-63 138-176 (208)
25 1m5a_B Insulin B chain; alpha 39.6 32 0.0011 19.4 3.0 18 40-57 9-26 (30)
26 1oih_A Putative alkylsulfatase 39.6 25 0.00087 30.9 4.1 53 26-81 25-78 (301)
27 3ocr_A Class II aldolase/adduc 38.3 19 0.00063 31.7 2.9 37 27-63 155-192 (273)
28 4ay7_A Methylcobalamin\: coenz 32.0 73 0.0025 28.6 6.0 42 39-80 303-348 (348)
29 3pvj_A Alpha-ketoglutarate-dep 31.5 35 0.0012 29.8 3.6 52 26-80 13-64 (277)
30 3r1j_A Alpha-ketoglutarate-dep 31.4 43 0.0015 29.7 4.2 53 26-81 19-72 (301)
31 3m4r_A Uncharacterized protein 25.3 26 0.00089 29.7 1.5 34 29-63 156-190 (222)
32 2qt7_A Receptor-type tyrosine- 23.6 63 0.0021 23.3 3.0 33 151-184 18-51 (91)
33 2x4k_A 4-oxalocrotonate tautom 23.4 73 0.0025 20.0 3.3 25 146-171 17-41 (63)
34 2rdq_A 1-deoxypentalenic acid 22.9 78 0.0027 27.2 4.3 35 44-79 22-56 (288)
35 2z7b_A MLR6791 protein; class 21.3 30 0.001 30.3 1.1 37 27-63 156-201 (270)
36 3kt7_A PKHD-type hydroxylase T 21.1 1.7E+02 0.0058 28.8 6.4 107 153-281 104-231 (633)
37 3abf_A 4-oxalocrotonate tautom 21.1 99 0.0034 19.6 3.6 24 147-171 16-39 (64)
38 4hti_A Receptor-type tyrosine- 20.3 94 0.0032 22.8 3.5 34 152-186 26-60 (99)
No 1
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A*
Probab=100.00 E-value=1.2e-79 Score=581.06 Aligned_cols=319 Identities=31% Similarity=0.572 Sum_probs=283.8
Q ss_pred CCCCCCCCcCcCCCcccccccc---cC---CCCCccEEeCCC--CC----CHHHHHHHHHHhHhcceEEEEcCCCCHHHH
Q 039524 1 MGLKSLPKQFHQPLEERFSEKK---IL---DQVSIPLIDMSN--WE----SPEVAKSICDAAENWGFFQIVNHGVPLEVL 68 (331)
Q Consensus 1 ~~~~~~p~~~~~~~~~~~~~~~---~~---~~~~iPvIDl~~--~~----~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~ 68 (331)
+|+.+||++|++|+.+++.... .. ...+||||||+. .+ +.+++++|.+||++||||||+||||+.+++
T Consensus 13 ~~~~~vP~~~~~p~~~~~~~~~~~~~~~~~~~~~iPvIDls~l~~~~~~~~~~~~~~l~~A~~~~GFF~v~nHGi~~~l~ 92 (356)
T 1gp6_A 13 SGIISIPKEYIRPKEELESINDVFLEEKKEDGPQVPTIDLKNIESDDEKIRENCIEELKKASLDWGVMHLINHGIPADLM 92 (356)
T ss_dssp TTCSSCCGGGSCCHHHHTTCCCHHHHHHCCCSCCCCEEECTTTTCSCHHHHHHHHHHHHHHHHHTSEEEEESCSCCHHHH
T ss_pred cCCCCCCHHhcCCchhcccccccccccccccCCCCCEEEchhccCCChHHHHHHHHHHHHHHHhCCEEEEeCCCCCHHHH
Confidence 4688999999999888765311 00 124699999987 22 355889999999999999999999999999
Q ss_pred HHHHHHHHHhcCCCHHHHhcccccCCCCCcccccCCcccCcccccccccccccccCCCc-ccCCCCCh---hhHHHHHHH
Q 039524 69 ERVKEATHRFFALPAEEKRKYSKENSPTNKVRLGSSFVPLVEKALEWKDFLSLFYGSEE-ETSAFWPP---VCKDETLEY 144 (331)
Q Consensus 69 ~~~~~~~~~fF~lP~e~K~~~~~~~~~~~~~Gy~~~~~~~~~~~~d~~e~~~~~~~p~~-~~~~~wP~---~fr~~~~~y 144 (331)
+++++.+++||+||.|+|+++........++||+........+..||+|.|+++..|.. ..+|.||+ +||+.+++|
T Consensus 93 ~~~~~~~~~FF~lP~eeK~~~~~~~~~~~~~Gy~~~~~~~~~~~~d~kE~~~~~~~p~~~~~~~~wP~~~~~fr~~~~~y 172 (356)
T 1gp6_A 93 ERVKKAGEEFFSLSVEEKEKYANDQATGKIQGYGSKLANNASGQLEWEDYFFHLAYPEEKRDLSIWPKTPSDYIEATSEY 172 (356)
T ss_dssp HHHHHHHHHHHTSCHHHHGGGBCBGGGTBCSEEECCCCCSTTCCCCSCEEEEEEEESGGGCCGGGSCCSSTTHHHHHHHH
T ss_pred HHHHHHHHHHHCCCHHHHHhhcccccccCccccCcCcccCCCCCCChhheeeeecCCccccccccCCCcchhhhHHHHHH
Confidence 99999999999999999999987532135789976654455678899999998866654 56789997 999999999
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCCCcccccccc---CCceeeEeecCCCCCCCCCcccccCCCCCCceEEEEcCCCCcccc
Q 039524 145 MKSSEVLIRRLMHVLVKGLNVKRIDEIREPML---LGSRRVNLNYYPMCPNPELTVGVGRHSDISTFTILLQDDIGGLHV 221 (331)
Q Consensus 145 ~~~~~~la~~ll~~la~~Lgl~~~~~~~~~~~---~~~~~lr~~~Yp~~~~~~~~~g~~~HtD~~~lTlL~qd~~~GLqV 221 (331)
+++|.+|+.+|+++|+++||++ +++|.+.+. .+.+.||++|||||++++..+|+++|||+|+||||+||+++||||
T Consensus 173 ~~~~~~l~~~ll~~la~~Lgl~-~~~f~~~~~~~~~~~~~lrl~~YPp~~~~~~~~g~~~HtD~g~lTlL~qd~v~GLQV 251 (356)
T 1gp6_A 173 AKCLRLLATKVFKALSVGLGLE-PDRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALTFILHNMVPGLQL 251 (356)
T ss_dssp HHHHHHHHHHHHHHHHHHTTSC-TTHHHHHTTHHHHCEEEEEEEEECCCSSTTTCCSEEEECCCSSEEEEEECSCCCEEE
T ss_pred HHHHHHHHHHHHHHHHHHcCCC-HHHHHHHhcccCCccceeeeeecCCCCCcccccCcCCccCCCeEEEEEEcCCCCeEE
Confidence 9999999999999999999999 999999887 477889999999999988889999999999999999999999999
Q ss_pred ccCCCCCeEEecCCCCeEEEEcchhhHHhhCCccccccceeecCCCCCeeeeeeeeCCCCCc-eeecCccccCCCCCCCC
Q 039524 222 RKDSGNDWIHVAPISGSLIINIGDALQIMSNGRYKSIEHCVIANGSQNRISVPLFVNPKPEA-ILCPFPEVLANGEKPLY 300 (331)
Q Consensus 222 ~~~~~g~W~~V~~~pg~lvVniGd~l~~~TnG~~~s~~HRV~~~~~~~R~Si~~F~~p~~d~-~i~pl~~~v~~~~p~~y 300 (331)
+++ |+|++|+|.||++||||||+||+||||+||||+|||+.++..+|||++||++|+.|+ +|.|+++|+++++|++|
T Consensus 252 ~~~--g~Wi~V~p~pgalvVNiGD~l~~~TnG~~kS~~HRVv~~~~~~R~Sia~F~~P~~d~~~i~pl~~~~~~~~p~~y 329 (356)
T 1gp6_A 252 FYE--GKWVTAKCVPDSIVMHIGDTLEILSNGKYKSILHRGLVNKEKVRISWAVFCEPPKDKIVLKPLPEMVSVESPAKF 329 (356)
T ss_dssp EET--TEEEECCCCTTCEEEEECHHHHHHTTTSSCCCCEEECCCSSCCEEEEEEEEECCTTTCEECCCGGGCCSSSCCSS
T ss_pred ecC--CcEEECcCCCCeEEEEeccHHHHhcCCEeeccCceecCCCCCCEEEEEEeecCCCCCcEEeCChhhcCCCCCccC
Confidence 987 999999999999999999999999999999999999998888999999999999999 99999999999999999
Q ss_pred CCccHHHHHHHHHHhcCCCCcc
Q 039524 301 KPVLCADYSRHFYTKAHDGKKT 322 (331)
Q Consensus 301 ~~~t~~e~~~~~~~~~~~~~~~ 322 (331)
+++|++||+..++.++++|+..
T Consensus 330 ~~~t~~eyl~~~~~~~~d~~~~ 351 (356)
T 1gp6_A 330 PPRTFAQHIEHKLFGKEQEELV 351 (356)
T ss_dssp CCEEHHHHHHHHHHHHHHHHC-
T ss_pred CCccHHHHHHHHHHhccCcchh
Confidence 9999999999999988776543
No 2
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15}
Probab=100.00 E-value=9.5e-76 Score=545.72 Aligned_cols=288 Identities=21% Similarity=0.350 Sum_probs=254.3
Q ss_pred CCCCCccEEeCCC--CCCHHHHHHHHHHhHhcceEEEEcCCCCHHHHHHHHHHHHHhcCCCHHHHhcccccCCCCCcccc
Q 039524 24 LDQVSIPLIDMSN--WESPEVAKSICDAAENWGFFQIVNHGVPLEVLERVKEATHRFFALPAEEKRKYSKENSPTNKVRL 101 (331)
Q Consensus 24 ~~~~~iPvIDl~~--~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~lP~e~K~~~~~~~~~~~~~Gy 101 (331)
|++.+||||||+. ..+++++++|.+||++||||||+||||+.++++++++.+++||+||.|+|+++... ....+||
T Consensus 2 m~~~~iPvIDls~~~~~~~~~~~~l~~A~~~~GFf~v~nHGi~~~~~~~~~~~~~~fF~lP~e~K~~~~~~--~~~~~Gy 79 (312)
T 3oox_A 2 MSTSAIDPVSFSLYAKDFTRFAQELGASFERYGFAVLSDYDLDQARIDAAVDSAKAFFALPVETKKQYAGV--KGGARGY 79 (312)
T ss_dssp --CCSSCCEETHHHHHCHHHHHHHHHHHHHHHSEEEEESCCSCHHHHHHHHHHHHHHHTSCHHHHGGGBSS--GGGTSEE
T ss_pred CCCCCCCeEEChHhcccHHHHHHHHHHHHHhCcEEEEECCCCCHHHHHHHHHHHHHHHCCCHHHHhhhccC--CCCcccc
Confidence 3567899999987 35678899999999999999999999999999999999999999999999999874 2457899
Q ss_pred cCCccc--CcccccccccccccccC-CC-c-----ccCCCCCh---hhHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCc
Q 039524 102 GSSFVP--LVEKALEWKDFLSLFYG-SE-E-----ETSAFWPP---VCKDETLEYMKSSEVLIRRLMHVLVKGLNVKRID 169 (331)
Q Consensus 102 ~~~~~~--~~~~~~d~~e~~~~~~~-p~-~-----~~~~~wP~---~fr~~~~~y~~~~~~la~~ll~~la~~Lgl~~~~ 169 (331)
...... ......||+|.|.++.. +. . ..+|.||+ +||+.+++|+++|.+|+.+|+++||++||++ ++
T Consensus 80 ~~~g~e~~~~~~~~D~kE~~~~~~~~~~~~~~~~~~~~n~wP~~~p~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~-~~ 158 (312)
T 3oox_A 80 IPFGVETAKGADHYDLKEFWHMGRDLPPGHRFRAHMADNVWPAEIPAFKHDVSWLYNSLDGMGGKVLEAIATYLKLE-RD 158 (312)
T ss_dssp ECCCCCCSTTSCSCCCCEEEEECCCCCTTCGGGGTSCCCCCCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTSC-TT
T ss_pred ccccceecCCCCCCCceeeeEeecCCCcCCcchhccCCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcC-HH
Confidence 533211 12356899999987642 21 1 34689997 8999999999999999999999999999999 99
Q ss_pred cccccccCCceeeEeecCCCCCCCCCcccccCCCCCCceEEEEcCCCCccccc-cCCCCCeEEecCCCCeEEEEcchhhH
Q 039524 170 EIREPMLLGSRRVNLNYYPMCPNPELTVGVGRHSDISTFTILLQDDIGGLHVR-KDSGNDWIHVAPISGSLIINIGDALQ 248 (331)
Q Consensus 170 ~~~~~~~~~~~~lr~~~Yp~~~~~~~~~g~~~HtD~~~lTlL~qd~~~GLqV~-~~~~g~W~~V~~~pg~lvVniGd~l~ 248 (331)
+|.+.+..+.+.||++|||||+.++..+|+++|||+|+||||+||+++||||+ ++ |+|++|+|.||++||||||+||
T Consensus 159 ~f~~~~~~~~~~lr~~~Ypp~~~~~~~~g~~~HtD~g~lTlL~qd~v~GLqV~~~~--g~W~~V~p~pg~~vVNiGD~l~ 236 (312)
T 3oox_A 159 FFKPTVQDGNSVLRLLHYPPIPKDATGVRAGAHGDINTITLLLGAEEGGLEVLDRD--GQWLPINPPPGCLVINIGDMLE 236 (312)
T ss_dssp TTHHHHTTCCCEEEEEEECCCSSCCC--CEEEECCCSSEEEEECCTTSCEEEECTT--SCEEECCCCSSCEEEEECHHHH
T ss_pred HHHHHhcCCcceeeeEecCCCCCCcCCcCccceecCceEEEEeEcCcCceEEECCC--CcEEECCCCCCeEEEEhHHHHH
Confidence 99999988888999999999988655599999999999999999999999997 57 9999999999999999999999
Q ss_pred HhhCCccccccceeecCC----CCCeeeeeeeeCCCCCceeecCccccCCCCCCCCC-CccHHHHHHHHHHhc
Q 039524 249 IMSNGRYKSIEHCVIANG----SQNRISVPLFVNPKPEAILCPFPEVLANGEKPLYK-PVLCADYSRHFYTKA 316 (331)
Q Consensus 249 ~~TnG~~~s~~HRV~~~~----~~~R~Si~~F~~p~~d~~i~pl~~~v~~~~p~~y~-~~t~~e~~~~~~~~~ 316 (331)
+||||+||||+|||+++. ..+|||++||++|+.|++|+|+++|+++++|++|+ ++|++||+..+++..
T Consensus 237 ~~TnG~~kS~~HRVv~~~~~~~~~~R~Sia~F~~P~~d~~i~pl~~~v~~~~p~~y~~~~t~~eyl~~r~~~~ 309 (312)
T 3oox_A 237 RLTNNVLPSTVHRVVNPPPERRGVPRYSTPFFLHFASDYEIKTLQNCVTAENPDRYPESITADEFLQQRLREI 309 (312)
T ss_dssp HHTTTSSCCCCEEECCCCGGGTTSCEEECCEEECCCTTCEECCCGGGCCSSSCCSCSSCEEHHHHHHHHHHHH
T ss_pred HHhCCeecCCCceEeCCCccCCCCCEEEEEEEecCCCCcEEecCccccCCCCcccCCCCeeHHHHHHHHHHHh
Confidence 999999999999998763 45799999999999999999999999999999999 999999999998854
No 3
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X
Probab=100.00 E-value=3e-76 Score=549.70 Aligned_cols=291 Identities=28% Similarity=0.527 Sum_probs=258.0
Q ss_pred CCccEEeCCC---CCCHHHHHHHHHHhHhcceEEEEcCCCCHHHHHHHHHHHHHhcCCCHHHHhcccccCCCCCcccccC
Q 039524 27 VSIPLIDMSN---WESPEVAKSICDAAENWGFFQIVNHGVPLEVLERVKEATHRFFALPAEEKRKYSKENSPTNKVRLGS 103 (331)
Q Consensus 27 ~~iPvIDl~~---~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~lP~e~K~~~~~~~~~~~~~Gy~~ 103 (331)
.+||||||+. ..+.+++++|.+||++||||||+||||+.++++++++.+++||+||.|+|+++... .+||..
T Consensus 2 ~~iPvIDls~l~~~~~~~~~~~l~~A~~~~GFF~v~nHGi~~~l~~~~~~~~~~FF~lP~e~K~~~~~~-----~~Gy~~ 76 (319)
T 1w9y_A 2 ENFPIISLDKVNGVERAATMEMIKDACENWGFFELVNHGIPREVMDTVEKMTKGHYKKCMEQRFKELVA-----SKALEG 76 (319)
T ss_dssp CCCCEEEGGGGGSTTHHHHHHHHHHHHHHTSEEEEESCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HHHHTT
T ss_pred CCCCEEECcccCcccHHHHHHHHHHHHHhCCEEEEEcCCCCHHHHHHHHHHHHHHHcCCHHHHhhhccC-----CCCCCc
Confidence 4699999987 35678999999999999999999999999999999999999999999999998642 358853
Q ss_pred CcccCcccccccccccccccCCCcccCCCCCh---hhHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCccccccccC---
Q 039524 104 SFVPLVEKALEWKDFLSLFYGSEEETSAFWPP---VCKDETLEYMKSSEVLIRRLMHVLVKGLNVKRIDEIREPMLL--- 177 (331)
Q Consensus 104 ~~~~~~~~~~d~~e~~~~~~~p~~~~~~~wP~---~fr~~~~~y~~~~~~la~~ll~~la~~Lgl~~~~~~~~~~~~--- 177 (331)
. . .+.+..||+|.|.+...|. ..+|.||+ +||+.+++|+++|.+|+.+|+++|+++||++ +++|.+.+.+
T Consensus 77 ~-~-~e~~~~d~ke~~~~~~~p~-~~~~~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~-~~~f~~~~~~~~~ 152 (319)
T 1w9y_A 77 V-Q-AEVTDMDWESTFFLKHLPI-SNISEVPDLDEEYREVMRDFAKRLEKLAEELLDLLCENLGLE-KGYLKNAFYGSKG 152 (319)
T ss_dssp C-C-CCGGGCCCCEEEEEEEESC-CGGGGCTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCC-TTHHHHHHHTTTC
T ss_pred c-c-ccCCCCChhhheeeecCCc-ccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC-HHHHHHHhcCcCC
Confidence 3 2 2346789999999876554 34678997 8999999999999999999999999999999 9999988863
Q ss_pred CceeeEeecCCCCCCCCCcccccCCCCCCceEEEEcC-CCCccccccCCCCCeEEecCCCCeEEEEcchhhHHhhCCccc
Q 039524 178 GSRRVNLNYYPMCPNPELTVGVGRHSDISTFTILLQD-DIGGLHVRKDSGNDWIHVAPISGSLIINIGDALQIMSNGRYK 256 (331)
Q Consensus 178 ~~~~lr~~~Yp~~~~~~~~~g~~~HtD~~~lTlL~qd-~~~GLqV~~~~~g~W~~V~~~pg~lvVniGd~l~~~TnG~~~ 256 (331)
+.+.+|++|||||++++..+|+++|||+|+||||+|| +++||||+++ |+|++|+|.||++||||||+||+||||+||
T Consensus 153 ~~~~lrl~~YPp~~~~~~~~g~~~HtD~g~lTlL~qd~~v~GLQV~~~--g~Wi~V~p~pgalvVNiGD~l~~~SnG~~k 230 (319)
T 1w9y_A 153 PNFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKD--GQWIDVPPMRHSIVVNLGDQLEVITNGKYK 230 (319)
T ss_dssp CEEEEEEEECCCCSCGGGGSSCCCBCCSSSEEEEEESSSCCCEEEEET--TEEEECCCCTTCEEEEECHHHHHHTTTSSC
T ss_pred ccceeEEEecCCCcccccccccccccCCCceEEEEecCCCCeeeEeeC--CeEEEcccCCCcEEEEhHHHHHHHhCCeee
Confidence 5578999999999998888999999999999999995 7999999988 999999999999999999999999999999
Q ss_pred cccceeecCCCCCeeeeeeeeCCCCCceeecCccccCCC---CCCCCCCccHHHHHHHHHHhcCCCCcc-cccccc
Q 039524 257 SIEHCVIANGSQNRISVPLFVNPKPEAILCPFPEVLANG---EKPLYKPVLCADYSRHFYTKAHDGKKT-IDFAKI 328 (331)
Q Consensus 257 s~~HRV~~~~~~~R~Si~~F~~p~~d~~i~pl~~~v~~~---~p~~y~~~t~~e~~~~~~~~~~~~~~~-~~~~~~ 328 (331)
|++|||+.++..+|||++||++|+.|++|.|+++|++++ +|++|+++|++||+..++.+.+.++.. ++.+|+
T Consensus 231 S~~HRVv~~~~~~R~Sia~F~~p~~d~~i~pl~~l~~~~~~~~p~~Y~~~t~~ey~~~~~~~~~~~~~~~~~~~~~ 306 (319)
T 1w9y_A 231 SVMHRVIAQKDGARMSLASFYNPGSDAVIYPAPALVEKEAEENKQVYPKFVFDDYMKLYAGLKFQAKEPRFEAMKA 306 (319)
T ss_dssp CCCEEECCCSSSCCEEEEEEEECCTTCEECCCGGGC--------CCCCCEEHHHHHHTTTTTTCSSHHHHHHHHHH
T ss_pred cccceecCCCCCCceEEEEEecCCCCCeEeCchhhcCcccccCccccCcEeHHHHHHHHHhhhcCcchhHHHHHHH
Confidence 999999998888999999999999999999999999988 599999999999999999988877754 555554
No 4
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A*
Probab=100.00 E-value=1.4e-71 Score=517.06 Aligned_cols=277 Identities=14% Similarity=0.235 Sum_probs=234.8
Q ss_pred CCCccEEeCCC--CCCHHHHHHHHHHhHhcceEEEEcCCCCHHHHHHHHHHHHHhcCCC-HHHHhcccccCCCCCccccc
Q 039524 26 QVSIPLIDMSN--WESPEVAKSICDAAENWGFFQIVNHGVPLEVLERVKEATHRFFALP-AEEKRKYSKENSPTNKVRLG 102 (331)
Q Consensus 26 ~~~iPvIDl~~--~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~lP-~e~K~~~~~~~~~~~~~Gy~ 102 (331)
..+||||||+. ..... ++|.+||++||||||+||||+.++++++++.+++||+|| .|+|+++..... ...+||.
T Consensus 2 ~~~iPvIDls~l~~~~~~--~~l~~A~~~~GFf~l~nHGi~~~l~~~~~~~~~~fF~lP~~e~K~~~~~~~~-~~~~Gy~ 78 (311)
T 1dcs_A 2 DTTVPTFSLAELQQGLHQ--DEFRRCLRDKGLFYLTDCGLTDTELKSAKDLVIDFFEHGSEAEKRAVTSPVP-TMRRGFT 78 (311)
T ss_dssp CCCCCEEEHHHHHTTCSH--HHHHHHHHHTCEEEEESSSCCHHHHHHHHHHHHHHHHHCCHHHHHHTBCSSC-CSSSEEE
T ss_pred CCCCcEEEchhhcCCCHH--HHHHHHHHhCcEEEEECCCCCHHHHHHHHHHHHHHHcCCcHHHhHHhhccCC-CCCCcee
Confidence 35799999986 22222 399999999999999999999999999999999999999 999999987543 4579996
Q ss_pred CCccc------CcccccccccccccccCCCcccCCCCCh-hhHHHHHHHHHHHHHHHHHHHHHHHHHcCC----CCCccc
Q 039524 103 SSFVP------LVEKALEWKDFLSLFYGSEEETSAFWPP-VCKDETLEYMKSSEVLIRRLMHVLVKGLNV----KRIDEI 171 (331)
Q Consensus 103 ~~~~~------~~~~~~d~~e~~~~~~~p~~~~~~~wP~-~fr~~~~~y~~~~~~la~~ll~~la~~Lgl----~~~~~~ 171 (331)
..... ...+..||+|.|+++.. +|.||. +||+.+++|+++|.+|+.+|+++|+++||+ + +++|
T Consensus 79 ~~~~e~~~~~~~~~~~~d~~E~~~~~~~-----~n~wP~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~~-~~~f 152 (311)
T 1dcs_A 79 GLESESTAQITNTGSYSDYSMCYSMGTA-----DNLFPSGDFERIWTQYFDRQYTASRAVAREVLRATGTEPDGG-VEAF 152 (311)
T ss_dssp EC-----------------CEEEEECSS-----SCCCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCTTC-HHHH
T ss_pred eccccccccccCCCCCCCcceeeeccCC-----CCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcCc-HhHH
Confidence 54322 22467899999988743 578985 999999999999999999999999999999 7 7888
Q ss_pred cccccCCceeeEeecCCCCCCCC--C--cccccCCCCCCceEEEEcC-CCCc---cccccCCCCCeEEecCCCCeEEEEc
Q 039524 172 REPMLLGSRRVNLNYYPMCPNPE--L--TVGVGRHSDISTFTILLQD-DIGG---LHVRKDSGNDWIHVAPISGSLIINI 243 (331)
Q Consensus 172 ~~~~~~~~~~lr~~~Yp~~~~~~--~--~~g~~~HtD~~~lTlL~qd-~~~G---LqV~~~~~g~W~~V~~~pg~lvVni 243 (331)
.+. .+.+|++|||||+.++ . .+|+++|||+|+||||+|| +++| |||+++ |+|++|+|.||++||||
T Consensus 153 ~~~----~~~lrl~~YPp~~~~~~~~~~~~g~~~HtD~g~lTlL~qd~~v~G~~~LqV~~~--g~W~~V~p~pg~lvVNi 226 (311)
T 1dcs_A 153 LDC----EPLLRFRYFPQVPEHRSAEEQPLRMAPHYDLSMVTLIQQTPCANGFVSLQAEVG--GAFTDLPYRPDAVLVFC 226 (311)
T ss_dssp HSC----CCEEEEEEECC-----------CCEEEEEECSSEEEEEEECCTTCCCCEEEEET--TEEEECCCCTTCEEEEE
T ss_pred hhc----chhhheecCCCCCcccccCccccccccccCCCeEEEEecCCCCCCceeEEEEeC--CEEEeCcCCCCeEEEEH
Confidence 765 6789999999998763 3 6889999999999999999 8999 999997 99999999999999999
Q ss_pred chhhHHhhCCccccccceeecCC-----CCCeeeeeeeeCCCCCceeecCccccCCCCCCCC--CCccHHHHHHHHHHhc
Q 039524 244 GDALQIMSNGRYKSIEHCVIANG-----SQNRISVPLFVNPKPEAILCPFPEVLANGEKPLY--KPVLCADYSRHFYTKA 316 (331)
Q Consensus 244 Gd~l~~~TnG~~~s~~HRV~~~~-----~~~R~Si~~F~~p~~d~~i~pl~~~v~~~~p~~y--~~~t~~e~~~~~~~~~ 316 (331)
||+||+||||+||||+|||+.++ ..+|||++||++|+.|++|. +++|+++++|++| +++|++||+..++++.
T Consensus 227 GD~l~~~TnG~~kS~~HRVv~~~~~~~~~~~R~Si~~F~~p~~d~~i~-l~~~~~~~~p~~y~~~~~t~~ey~~~~~~~~ 305 (311)
T 1dcs_A 227 GAIATLVTGGQVKAPRHHVAAPRRDQIAGSSRTSSVFFLRPNADFTFS-VPLARECGFDVSLDGETATFQDWIGGNYVNI 305 (311)
T ss_dssp CHHHHHHTTSCSCCCCEEECCC----CTTCCEEEEEEEECCCTTCEEE-HHHHHHTTCCCCCCSSEEEHHHHHCSSCCCE
T ss_pred HHHHHHHhCCcccCCCceEeCCCcccCCCCCeEEEEEEEcCCCCcEEe-CCcccCCCCccccCCCCccHHHHHHHHHHHH
Confidence 99999999999999999999987 67999999999999999999 9999999999999 9999999999887776
Q ss_pred CC
Q 039524 317 HD 318 (331)
Q Consensus 317 ~~ 318 (331)
+.
T Consensus 306 ~~ 307 (311)
T 1dcs_A 306 RR 307 (311)
T ss_dssp EC
T ss_pred hc
Confidence 53
No 5
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ...
Probab=100.00 E-value=3e-70 Score=512.42 Aligned_cols=276 Identities=22% Similarity=0.293 Sum_probs=245.1
Q ss_pred CCCccEEeCCC--C----CCHHHHHHHHHHhHhcceEEEEcCCCCHHHHHHHHHHHHHh-cCCCHHHHhcccccCCCCCc
Q 039524 26 QVSIPLIDMSN--W----ESPEVAKSICDAAENWGFFQIVNHGVPLEVLERVKEATHRF-FALPAEEKRKYSKENSPTNK 98 (331)
Q Consensus 26 ~~~iPvIDl~~--~----~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~f-F~lP~e~K~~~~~~~~~~~~ 98 (331)
..+||||||+. . .+.+++++|.+||++||||||+|||| +++++++.+++| |+||.|+|+++..
T Consensus 6 ~~~iPvIDls~l~~~~~~~~~~~~~~l~~A~~~~GFf~v~nHGi---l~~~~~~~~~~F~F~lP~eeK~~~~~------- 75 (331)
T 1odm_A 6 KANVPKIDVSPLFGDDQAAKMRVAQQIDAASRDTGFFYAVNHGI---NVQRLSQKTKEFHMSITPEEKWDLAI------- 75 (331)
T ss_dssp BCCCCEEECGGGGSSCHHHHHHHHHHHHHHHHTTSEEEEESCCC---CHHHHHHHHHHHHHHCCHHHHHHHBC-------
T ss_pred CCCCCEEEchHhcCCChHHHHHHHHHHHHHHHhCCEEEEEccce---eHHHHHHHHHhccCCCCHHHHHhhhh-------
Confidence 46799999987 2 24568999999999999999999999 999999999999 9999999999965
Q ss_pred ccccCCcc--cCcc------cccccccccccccCCC-----------cccCCCCCh-----hhHHHHHHHHHHHHHHHHH
Q 039524 99 VRLGSSFV--PLVE------KALEWKDFLSLFYGSE-----------EETSAFWPP-----VCKDETLEYMKSSEVLIRR 154 (331)
Q Consensus 99 ~Gy~~~~~--~~~~------~~~d~~e~~~~~~~p~-----------~~~~~~wP~-----~fr~~~~~y~~~~~~la~~ 154 (331)
+||..... ...+ +..||+|.|+++.... ...+|.||+ +||+.+++|+++|.+|+.+
T Consensus 76 ~Gy~~~~~e~~~~~~~~~~~~~~d~kE~~~~~~~~~~~~p~~~~~~~~~~~n~wP~~~~~p~fr~~~~~y~~~~~~l~~~ 155 (331)
T 1odm_A 76 RAYNKEHQDQVRAGYYLSIPGKKAVESFCYLNPNFTPDHPRIQAKTPTHEVNVWPDETKHPGFQDFAEQYYWDVFGLSSA 155 (331)
T ss_dssp TTTCTTCTTCSSSEEECCBTTTBCCEEEEECCTTCCTTSHHHHTTCTTCCCCCCCCTTTSTTHHHHHHHHHHHHHHHHHH
T ss_pred cCCCcCCccccccccccccCCCCChhheEecccCCccccccccccccccCCCCCCCCCCChHHHHHHHHHHHHHHHHHHH
Confidence 45642211 1122 5779999999875321 124789996 7999999999999999999
Q ss_pred HHHHHHHHcCCCCCccccccccCCceeeE--eecCC------C---CCCCCC-cccccCCCCCCceEEEEcCCCCccccc
Q 039524 155 LMHVLVKGLNVKRIDEIREPMLLGSRRVN--LNYYP------M---CPNPEL-TVGVGRHSDISTFTILLQDDIGGLHVR 222 (331)
Q Consensus 155 ll~~la~~Lgl~~~~~~~~~~~~~~~~lr--~~~Yp------~---~~~~~~-~~g~~~HtD~~~lTlL~qd~~~GLqV~ 222 (331)
|+++|+++||++ +++|.+.+..+.+.|| ++||| | |++++. .+|+++|||+|+||||+||+++||||+
T Consensus 156 ll~~la~~Lgl~-~~~f~~~~~~~~~~lr~~l~~YP~~~~~~p~~~~~~~~~~~~g~~~HtD~g~lTlL~qd~v~GLQV~ 234 (331)
T 1odm_A 156 LLKGYALALGKE-ENFFARHFKPDDTLASVVLIRYPYLDPYPEAAIKTAADGTKLSFEWHEDVSLITVLYQSNVQNLQVE 234 (331)
T ss_dssp HHHHHHHHTTSC-TTTTGGGCCTTTCCCEEEEEEECCCSSCCGGGCEECTTSCEEEEEEECCSSSEEEEEECSSCCEEEE
T ss_pred HHHHHHHHhCCC-HHHHHHHhcCcHHHHHHHHhhCCCcccccccccCCCccccccccccccCCCeEEEEeeCCCCCEEEE
Confidence 999999999999 9999999988888999 99999 7 777665 899999999999999999999999999
Q ss_pred -cCCCCCeEEecCCCCeEEEEcchhhHHhhCCccccccceeecCCCCCeeeeeeeeCCCCCceeecCccccCCCCCCCCC
Q 039524 223 -KDSGNDWIHVAPISGSLIINIGDALQIMSNGRYKSIEHCVIANGSQNRISVPLFVNPKPEAILCPFPEVLANGEKPLYK 301 (331)
Q Consensus 223 -~~~~g~W~~V~~~pg~lvVniGd~l~~~TnG~~~s~~HRV~~~~~~~R~Si~~F~~p~~d~~i~pl~~~v~~~~p~~y~ 301 (331)
++ | |++|+|.||++||||||+||+||||+||||+|||+. +..+|||++||++|+.|++|.|+++++++++ ++|+
T Consensus 235 ~~~--g-Wi~V~p~pgalvVNiGD~l~~~TnG~~kS~~HRVv~-~~~~R~Sia~F~~P~~d~~i~pl~~~~~~~~-~~y~ 309 (331)
T 1odm_A 235 TAA--G-YQDIEADDTGYLINCGSYMAHLTNNYYKAPIHRVKW-VNAERQSLPFFVNLGYDSVIDPFDPREPNGK-SDRE 309 (331)
T ss_dssp ETT--E-EEECCCCTTSEEEEECHHHHHHTTTSSCCCCEEEEC-CCSCEEEEEEEECCCTTCBCCCCCTTSTTCC-CSSC
T ss_pred cCC--C-eEECCCCCCeEEEEccHHHHHHhCCEeeCCCceeCC-CCCCEEEEEEEEcCCCCCEEeCCCccccccc-cCCC
Confidence 67 8 999999999999999999999999999999999986 4779999999999999999999999999888 8999
Q ss_pred CccHHHHHHHHHHhcC
Q 039524 302 PVLCADYSRHFYTKAH 317 (331)
Q Consensus 302 ~~t~~e~~~~~~~~~~ 317 (331)
++|++||+..++++.+
T Consensus 310 ~~t~~e~l~~~~~~~~ 325 (331)
T 1odm_A 310 PLSYGDYLQNGLVSLI 325 (331)
T ss_dssp CCBHHHHHHHHHHHHH
T ss_pred CccHHHHHHHHHHHHH
Confidence 9999999999988753
No 6
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis}
Probab=100.00 E-value=1.4e-66 Score=476.52 Aligned_cols=260 Identities=24% Similarity=0.366 Sum_probs=220.2
Q ss_pred CCccEEeCCCCCCHHHHHHHHHHhHhcceEEEEcCCCCHHHHHHHHHHHHHhcCCCHHHHhcccccCCCCCcccccCCc-
Q 039524 27 VSIPLIDMSNWESPEVAKSICDAAENWGFFQIVNHGVPLEVLERVKEATHRFFALPAEEKRKYSKENSPTNKVRLGSSF- 105 (331)
Q Consensus 27 ~~iPvIDl~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~lP~e~K~~~~~~~~~~~~~Gy~~~~- 105 (331)
++||||||+.. +++++|.+||++||||||+||||+.++++++++.+++||+| |+|+++.... ...+||....
T Consensus 2 ~~IPvIDls~~---~~~~~l~~A~~~~GFF~v~nHGi~~~li~~~~~~~~~FF~l--e~K~k~~~~~--~~~~GY~~~~~ 74 (280)
T 3on7_A 2 MKLETIDYRAA---DSAKRFVESLRETGFGVLSNHPIDKELVERIYTEWQAFFNS--EAKNEFMFNR--ETHDGFFPASI 74 (280)
T ss_dssp --CCEEETTST---THHHHHHHHHHHHSEEEEESCSSCHHHHHHHHHHHHHHHTS--GGGGGGBCCT--TTCCEEECCC-
T ss_pred CCCCEEECCCh---hHHHHHHHHHHhCCEEEEECCCCCHHHHHHHHHHHHHHhhh--HHHHHhccCC--CCCCccccCcc
Confidence 46999999863 36899999999999999999999999999999999999998 7899987642 4579996432
Q ss_pred cc--CcccccccccccccccCCCcccCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCC--cc---ccccccCC
Q 039524 106 VP--LVEKALEWKDFLSLFYGSEEETSAFWPPVCKDETLEYMKSSEVLIRRLMHVLVKGLNVKRI--DE---IREPMLLG 178 (331)
Q Consensus 106 ~~--~~~~~~d~~e~~~~~~~p~~~~~~~wP~~fr~~~~~y~~~~~~la~~ll~~la~~Lgl~~~--~~---~~~~~~~~ 178 (331)
.. ......||+|.|.+. |. ..||++||+.+++|+++|.+|+.+|+++||++||++ . ++ |.+.+.++
T Consensus 75 ~e~~~~~~~~D~kE~~~~~--p~----~~~p~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~-~~~~~~~~~~~~~~~~ 147 (280)
T 3on7_A 75 SETAKGHTVKDIKEYYHVY--PW----GRIPDSLRANILAYYEKANTLASELLEWIETYSPDE-IKAKFSIPLPEMIANS 147 (280)
T ss_dssp -------CCCCSCEEEEEC--TT----SCCCGGGHHHHHHHHHHHHHHHHHHHHHHHHTSCHH-HHTTCSSCHHHHHTTC
T ss_pred ccccCCCCcccHHHHHhcC--CC----CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCc-chhhhhHHHHHHhcCC
Confidence 11 122467999998763 11 125569999999999999999999999999999975 3 22 44455554
Q ss_pred -ceeeEeecCCCCCCCC--CcccccCCCCCCceEEEEcCCCCccccc-cCCCCCeEEecCCCCeEEEEcchhhHHhhCCc
Q 039524 179 -SRRVNLNYYPMCPNPE--LTVGVGRHSDISTFTILLQDDIGGLHVR-KDSGNDWIHVAPISGSLIINIGDALQIMSNGR 254 (331)
Q Consensus 179 -~~~lr~~~Yp~~~~~~--~~~g~~~HtD~~~lTlL~qd~~~GLqV~-~~~~g~W~~V~~~pg~lvVniGd~l~~~TnG~ 254 (331)
.+.||++|||||+.++ ..+|+++|||+|+||||+||+++||||+ ++ |+|++|+|.||++|||+||+||+||||+
T Consensus 148 ~~~~lr~~~YP~~~~~~~~~~~g~~~HtD~g~lTlL~qd~~~GLqV~~~~--g~W~~V~p~pg~~vVNiGD~l~~~Tng~ 225 (280)
T 3on7_A 148 HKTLLRILHYPPMTGDEEMGAIRAAAHEDINLITVLPTANEPGLQVKAKD--GSWLDVPSDFGNIIINIGDMLQEASDGY 225 (280)
T ss_dssp SSCEEEEEEECCCCTTCCCCSEEEEEECCCSSEEEEECCSCCCEEEECTT--SCEEECCCCTTCEEEEECHHHHHHTTTS
T ss_pred ccceEEEEECCCCCCccccCcccccCCCCCCeEEEEEecCCCCeEEEcCC--CCEEECcCCCCEEEEEcChHHHHHhCCc
Confidence 3889999999998754 5799999999999999999999999999 56 9999999999999999999999999999
Q ss_pred cccccceeecCC----CCCeeeeeeeeCCCCCceeecCccccCCCCCCCCCCccHHHHHHHHHHhc
Q 039524 255 YKSIEHCVIANG----SQNRISVPLFVNPKPEAILCPFPEVLANGEKPLYKPVLCADYSRHFYTKA 316 (331)
Q Consensus 255 ~~s~~HRV~~~~----~~~R~Si~~F~~p~~d~~i~pl~~~v~~~~p~~y~~~t~~e~~~~~~~~~ 316 (331)
||||+|||+.++ ..+|||++||++|+.|++|.| ++|++||+.+++++.
T Consensus 226 ~kS~~HRVv~~~~~~~~~~R~Si~~F~~P~~d~~i~p--------------~ita~~~l~~rl~~~ 277 (280)
T 3on7_A 226 FPSTSHRVINPEGTDKTKSRISLPLFLHPHPSVVLSE--------------RYTADSYLMERLREL 277 (280)
T ss_dssp SCCCCEEEECCTTCCTTSCEEECCEEECCCTTCBCSS--------------SCBHHHHHHHHHHHT
T ss_pred ccCCCceEeCCCCCCCCCCeEEEEEEEcCCCCCEECC--------------CccHHHHHHHHHHHh
Confidence 999999999874 458999999999999999975 589999999999864
No 7
>3dkq_A PKHD-type hydroxylase SBAL_3634; putative oxygenase, structural genomics, JOI for structural genomics, JCSG; 2.26A {Shewanella baltica OS155}
Probab=94.04 E-value=0.039 Score=48.40 Aligned_cols=80 Identities=20% Similarity=0.198 Sum_probs=51.1
Q ss_pred eeeEeecCCCCCCCCCcccccCCCCCC-----------ceEEEEc--C--C-C-CccccccCCCCCeEEecCCCCeEEEE
Q 039524 180 RRVNLNYYPMCPNPELTVGVGRHSDIS-----------TFTILLQ--D--D-I-GGLHVRKDSGNDWIHVAPISGSLIIN 242 (331)
Q Consensus 180 ~~lr~~~Yp~~~~~~~~~g~~~HtD~~-----------~lTlL~q--d--~-~-~GLqV~~~~~g~W~~V~~~pg~lvVn 242 (331)
.-+++++|.+-. -..+|.|.. .+|+++. + . . |.|.+... ..=..|+|..|.+|+.
T Consensus 99 e~~~~~rY~~G~------~y~~H~D~~~~~~~~~~~~r~~T~~lYLndp~~~~GGetvf~~~--~~~~~V~P~~G~~v~F 170 (243)
T 3dkq_A 99 YPPLFNRYQGGE------TFGYHIDNAIRSTPDGMIRTDLSATLFLSEPENYQGGELVIQDT--YGQQSIKLSAGSLVLY 170 (243)
T ss_dssp EEEEEEEECTTC------EEEEECBCSEEEETTEEEECCEEEEEECSCGGGEEECCEEEEET--TEEEEECCCTTCEEEE
T ss_pred ccceEEEECCCC------eeccCCCCCCCCCCCccccceEEEEEEeCCCCCCCCceEEEeeC--CCcEEEecCCCEEEEE
Confidence 347788887631 145666653 4566554 3 1 2 33544443 2236799999999987
Q ss_pred cchhhHHhhCCccccccceeecCCCCCeeeeeeeeCC
Q 039524 243 IGDALQIMSNGRYKSIEHCVIANGSQNRISVPLFVNP 279 (331)
Q Consensus 243 iGd~l~~~TnG~~~s~~HRV~~~~~~~R~Si~~F~~p 279 (331)
-. .++|+|..-....|++++.+++-
T Consensus 171 ~s------------~~lH~v~pV~~G~R~~~~~Wi~s 195 (243)
T 3dkq_A 171 PS------------SSLHQVTPVLSGERTAAFMWLQS 195 (243)
T ss_dssp ET------------TSEEEECCEEEECEEEEEEEEEE
T ss_pred CC------------CCeEcCccccccCEEEEEEehhh
Confidence 42 36899976445689999988863
No 8
>2rg4_A Uncharacterized protein; rhodobacterales, oceanicola granulosus HTCC2516, Q2CBJ1_9RHO structural genomics, PSI-2; 1.90A {Oceanicola granulosus} PDB: 3bvc_A
Probab=92.48 E-value=1.8 Score=36.92 Aligned_cols=43 Identities=26% Similarity=0.220 Sum_probs=34.3
Q ss_pred CCeEEecCCCCeEEEEcchhhHHhhCCccccccceeecCCC-CCeeeeeeeeCCCC
Q 039524 227 NDWIHVAPISGSLIINIGDALQIMSNGRYKSIEHCVIANGS-QNRISVPLFVNPKP 281 (331)
Q Consensus 227 g~W~~V~~~pg~lvVniGd~l~~~TnG~~~s~~HRV~~~~~-~~R~Si~~F~~p~~ 281 (331)
..+..|.|.+|.+||.-+.+ .|.|..+.. ++|+||+|-+.+..
T Consensus 166 ~~~~~i~P~~G~lvlFpS~l------------~H~V~p~~~~~~RiSIsFN~~~~~ 209 (216)
T 2rg4_A 166 RTFRSVAPKVGDVLLWESWL------------RHEVPMNMAEEDRISVSFNYAWGE 209 (216)
T ss_dssp CSEEEECCCTTEEEEEETTS------------CEEECCCCSSSCEEEEEEEEEC--
T ss_pred CCeeEecCCCCeEEEECCCC------------EEeccCCCCCCCEEEEEEEeecCC
Confidence 46778999999999987765 899987654 68999999988764
No 9
>2hbt_A EGL nine homolog 1; prolyl hydroxylase, hypoxia inducible factor, HIF, 2- oxoglutarate, oxygenase, oxidoreductase; HET: UN9; 1.60A {Homo sapiens} PDB: 2hbu_A* 2g1m_A* 3hqu_A* 3hqr_A* 2y33_A* 2y34_A* 2g19_A* 3ouj_A* 3ouh_A* 3oui_A*
Probab=88.22 E-value=0.95 Score=39.56 Aligned_cols=183 Identities=16% Similarity=0.191 Sum_probs=97.5
Q ss_pred HHHHHHHHhHhcceEEEEcCCCCHHHHHHHHHHHHHhcCCCHHHHhcccccCCCCCcccccCCcccCc---ccccccccc
Q 039524 42 VAKSICDAAENWGFFQIVNHGVPLEVLERVKEATHRFFALPAEEKRKYSKENSPTNKVRLGSSFVPLV---EKALEWKDF 118 (331)
Q Consensus 42 ~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~lP~e~K~~~~~~~~~~~~~Gy~~~~~~~~---~~~~d~~e~ 118 (331)
..+.+.+++.+.|++++.|- +++++++.+.+.++.+-. ...+.. . ..|-... .... .....|.+.
T Consensus 15 ~~~~i~~~L~~~g~~Vid~f-Ls~ee~~~L~~~~~~~~~-----~g~~~~----a-~i~~~~~-~~~~~iR~d~i~wl~~ 82 (247)
T 2hbt_A 15 ALEYIVPCMNKHGICVVDDF-LGKETGQQIGDEVRALHD-----TGKFTD----G-QLVSQKS-DSSKDIRGDKITWIEG 82 (247)
T ss_dssp HHHTHHHHHHHTSEEEESSS-SCHHHHHHHHHHHHHHHH-----TTCSCS----C-CEEECCS-SSTTCEECCEEEEECS
T ss_pred hHHHHHHHhccCCEEEECCC-CCHHHHHHHHHHHHhhhh-----cCCccc----c-ccccccc-cccccccccceeeecc
Confidence 45678899999999887766 899999999988887420 001111 0 0110000 0000 000111110
Q ss_pred cccccCCCcccCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCccccccccCCceeeEeecCCCCCCCCCccc
Q 039524 119 LSLFYGSEEETSAFWPPVCKDETLEYMKSSEVLIRRLMHVLVKGLNVKRIDEIREPMLLGSRRVNLNYYPMCPNPELTVG 198 (331)
Q Consensus 119 ~~~~~~p~~~~~~~wP~~fr~~~~~y~~~~~~la~~ll~~la~~Lgl~~~~~~~~~~~~~~~~lr~~~Yp~~~~~~~~~g 198 (331)
. . | ..+.+..|.+.|.++... +...+|+. . .. ...-+.+..|++.. -.
T Consensus 83 -------~-----~-~--~~~~~~~l~~~i~~l~~~----ln~~lGl~-~------i~-~~~e~~~~~Y~~~G-----~~ 130 (247)
T 2hbt_A 83 -------K-----E-P--GCETIGLLMSSMDDLIRH----CNGKLGSY-K------IN-GRTKAMVACYPGNG-----TG 130 (247)
T ss_dssp -------C-----S-T--TCHHHHHHHHHHHHHHHH----TTTTSTTC-C------EE-EECCEEEEEECSSS-----CC
T ss_pred -------c-----c-c--chhHHHHHHHHHHHHHHH----HhhhcCcc-c------cc-ccceEEEEEecCCC-----Cc
Confidence 0 0 0 011233355555444332 22223433 1 00 01225667887511 12
Q ss_pred ccCCCCCC-----ceEEEEc--CC------CCccccccCCCCCeEEecCCCCeEEEEcchhhHHhhCCccccccceeecC
Q 039524 199 VGRHSDIS-----TFTILLQ--DD------IGGLHVRKDSGNDWIHVAPISGSLIINIGDALQIMSNGRYKSIEHCVIAN 265 (331)
Q Consensus 199 ~~~HtD~~-----~lTlL~q--d~------~~GLqV~~~~~g~W~~V~~~pg~lvVniGd~l~~~TnG~~~s~~HRV~~~ 265 (331)
..+|.|.. .+|+++. ++ .|-|.++....+....|.|..|.+|+.-.+. -.+|.|..
T Consensus 131 y~~H~D~~~~~~R~~T~vlYLN~~w~~~~~GG~l~~~~~~~~~~~~v~P~~grlv~F~s~~----------~~~H~V~p- 199 (247)
T 2hbt_A 131 YVRHVDNPNGDGRCVTCIYYLNKDWDAKVSGGILRIFPEGKAQFADIEPKFDRLLFFWSDR----------RNPHEVQP- 199 (247)
T ss_dssp EEEECSSCSCCSEEEEEEEECBTTCCHHHHBCCEEECCTTCSSCEEECCBTTEEEEEECST----------TCCEEECC-
T ss_pred ccccccCCCCCCceEEEEEEeCCCCCCCCCceeEEEecCCCCceEEEEcCCCEEEEEecCC----------Cceeeecc-
Confidence 45677762 6787765 21 2346777542136789999999999886431 16899976
Q ss_pred CCCCeeeeeeeeCC
Q 039524 266 GSQNRISVPLFVNP 279 (331)
Q Consensus 266 ~~~~R~Si~~F~~p 279 (331)
....|+||+..++-
T Consensus 200 ~~~~R~sit~W~~~ 213 (247)
T 2hbt_A 200 AYATRYAITVWYFD 213 (247)
T ss_dssp BSSCEEEEEEEEEE
T ss_pred CCCEEEEEEEEEcC
Confidence 55799999987654
No 10
>2iuw_A Alkylated repair protein ALKB homolog 3; oxidoreductase, DNA/RNA repair, demethylase, beta jellyroll; HET: AKG; 1.50A {Homo sapiens} SCOP: b.82.2.10
Probab=82.84 E-value=4.5 Score=34.94 Aligned_cols=86 Identities=16% Similarity=0.155 Sum_probs=52.5
Q ss_pred eeEeecCCCCCCCCCcccccCCCCCC--------ceEEEEcCCCCccccccCC---------CCCeEEecCCCCeEEEEc
Q 039524 181 RVNLNYYPMCPNPELTVGVGRHSDIS--------TFTILLQDDIGGLHVRKDS---------GNDWIHVAPISGSLIINI 243 (331)
Q Consensus 181 ~lr~~~Yp~~~~~~~~~g~~~HtD~~--------~lTlL~qd~~~GLqV~~~~---------~g~W~~V~~~pg~lvVni 243 (331)
.+-+|+|++- .-++++|.|-. +.||-+-.. .=+.+.... .+..+.+...+|+++|.-
T Consensus 127 ~~LvN~Y~~G-----~d~i~~H~D~~~~~~~~~~IaslSLG~~-~~f~f~~~~~~~~~~~~~~~~~~~i~L~~gsllvM~ 200 (238)
T 2iuw_A 127 SLLCNLYRNE-----KDSVDWHSDDEPSLGRCPIIASLSFGAT-RTFEMRKKPPPEENGDYTYVERVKIPLDHGTLLIME 200 (238)
T ss_dssp EEEEEEECST-----TCCEEEECCCCGGGCSSCCEEEEEEESC-EEEEEEECCC--------CCCEEEEEECTTCEEEEE
T ss_pred EEEEEEECCC-----CCceeCCcCChhhcCCCCcEEEEECCCC-EEEEEeccCCccccCcccCCceEEEEcCCCCEEEEC
Confidence 4568999763 23578888842 233333211 112222111 036899999999999999
Q ss_pred chhhHHhhCCccccccceeecCCCCCeeeeeeeeC
Q 039524 244 GDALQIMSNGRYKSIEHCVIANGSQNRISVPLFVN 278 (331)
Q Consensus 244 Gd~l~~~TnG~~~s~~HRV~~~~~~~R~Si~~F~~ 278 (331)
|++=..|..|.-+.. .....|+|+.|=.-
T Consensus 201 G~~r~~w~H~I~~~~------~~~~~RIsLTfR~v 229 (238)
T 2iuw_A 201 GATQADWQHRVPKEY------HSREPRVNLTFRTV 229 (238)
T ss_dssp ETHHHHEEEEECCCS------SCCCCEEEEEEECC
T ss_pred hhhhCccEecCCCcC------CCCCCEEEEEeeec
Confidence 998777765544321 13468999998653
No 11
>2jig_A Prolyl-4 hydroxylase; hydrolase; HET: PD2; 1.85A {Chlamydomonas reinhardtii} PDB: 3gze_A 2v4a_A 2jij_A
Probab=81.82 E-value=3.3 Score=35.21 Aligned_cols=48 Identities=15% Similarity=0.223 Sum_probs=33.5
Q ss_pred eEEecCCCCeEEEEcchhhHHhhCCcc-ccccceeecCCCCCeeeeeeeeCCC
Q 039524 229 WIHVAPISGSLIINIGDALQIMSNGRY-KSIEHCVIANGSQNRISVPLFVNPK 280 (331)
Q Consensus 229 W~~V~~~pg~lvVniGd~l~~~TnG~~-~s~~HRV~~~~~~~R~Si~~F~~p~ 280 (331)
-+.|.|..|.+|+.-- ...+|.. ..++|+|..-....|+++..+++-.
T Consensus 170 ~~~V~P~~G~al~f~~----~~~~g~~d~~~lH~~~PV~~G~K~~~~~Wi~~~ 218 (224)
T 2jig_A 170 GLAVKPIKGDALMFYS----LKPDGSNDPASLHGSCPTLKGDKWSATKWIHVA 218 (224)
T ss_dssp SEEECCCTTCEEEEES----BCTTSCBCGGGCEEECCEEESEEEEEEEEEESS
T ss_pred ceEEecccCcEEEEEe----eCCCCCCCCCCcccCCccccceEEEEEEeEEcC
Confidence 4789999998887643 1123332 5789998764456899999888654
No 12
>3i3q_A Alpha-ketoglutarate-dependent dioxygenase ALKB; beta jellyroll, DNA damage, DNA repair, iron, M binding, oxidoreductase; HET: AKG; 1.40A {Escherichia coli} SCOP: b.82.2.10 PDB: 2fd8_A* 2fdg_A* 2fdh_A* 2fdf_A* 2fdj_A 2fdk_A* 2fdi_A* 3i2o_A* 3i3m_A* 3i49_A* 3t4h_B* 3t3y_A* 3t4v_A* 3o1t_A* 3o1o_A* 3o1m_A* 3o1r_A* 3o1s_A* 3o1p_A* 3o1u_A* ...
Probab=81.74 E-value=9.2 Score=32.39 Aligned_cols=81 Identities=11% Similarity=0.110 Sum_probs=50.1
Q ss_pred eeEeecCCCCCCCCCcccccCCCCC-----C--ceEEEEcCCCCcccccc-CCCCCeEEecCCCCeEEEEcchhhHHhhC
Q 039524 181 RVNLNYYPMCPNPELTVGVGRHSDI-----S--TFTILLQDDIGGLHVRK-DSGNDWIHVAPISGSLIINIGDALQIMSN 252 (331)
Q Consensus 181 ~lr~~~Yp~~~~~~~~~g~~~HtD~-----~--~lTlL~qd~~~GLqV~~-~~~g~W~~V~~~pg~lvVniGd~l~~~Tn 252 (331)
.+-+|+|.+ +. ++++|.|- + ++|+-+-.. .=+.+.. ..++..+.+...+|+++|.-|+.- .|
T Consensus 106 ~~LvN~Y~~-----G~-~i~~H~D~~e~~~~~pI~svSLG~~-~~f~f~~~~~~~~~~~i~L~~GsllvM~G~~r-~~-- 175 (211)
T 3i3q_A 106 ACLINRYAP-----GA-KLSLHQDKDEPDLRAPIVSVSLGLP-AIFQFGGLKRNDPLKRLLLEHGDVVVWGGESR-LF-- 175 (211)
T ss_dssp EEEEEEECT-----TC-CEEEECCCCCSCTTSCEEEEEEESC-EEEEECCSSTTSCCEEEEECTTCEEEECGGGT-TC--
T ss_pred EEEEEEEcC-----CC-CcccccCCCccccCCCEEEEECCCC-eEEEEecccCCCceEEEECCCCCEEEECchHH-ce--
Confidence 456789976 23 68889982 2 233333221 2233332 112678999999999999988872 23
Q ss_pred CccccccceeecCCC-------CCeeeeeeee
Q 039524 253 GRYKSIEHCVIANGS-------QNRISVPLFV 277 (331)
Q Consensus 253 G~~~s~~HRV~~~~~-------~~R~Si~~F~ 277 (331)
.|.|..... ..|+|+.|-.
T Consensus 176 ------~H~I~~~~~~~~p~~~~~RIsLTFR~ 201 (211)
T 3i3q_A 176 ------YHGIQPLKAGFHPLTIDCRYNLTFRQ 201 (211)
T ss_dssp ------CEEECCCCCCCBTTTBTCEEEEEEEC
T ss_pred ------EeccCcccCCcCCCCCCCEEEEEeee
Confidence 466654321 3699999854
No 13
>3s57_A Alpha-ketoglutarate-dependent dioxygenase ALKB HO; protein-DNA complex, jelly-roll fold, dioxygenase, dsDNA BIN plasma, oxidoreductase-DNA complex; HET: AKG; 1.60A {Homo sapiens} PDB: 3s5a_A* 3rzg_A 3rzl_A 3rzh_A* 3rzj_A* 3rzk_A* 3rzm_A 3bty_A* 3buc_A* 3h8r_A* 3h8o_A* 3h8x_A* 3btx_A* 3bu0_A* 3btz_A*
Probab=80.53 E-value=3.6 Score=34.70 Aligned_cols=42 Identities=12% Similarity=0.078 Sum_probs=31.8
Q ss_pred CCeEEecCCCCeEEEEcchhhHHhhCCccccccceeecC--CCCCeeeeeee
Q 039524 227 NDWIHVAPISGSLIINIGDALQIMSNGRYKSIEHCVIAN--GSQNRISVPLF 276 (331)
Q Consensus 227 g~W~~V~~~pg~lvVniGd~l~~~TnG~~~s~~HRV~~~--~~~~R~Si~~F 276 (331)
+..+.+...+|+++|.-|++=..|. |.|-.. ....|+|+.|-
T Consensus 157 ~~~~~~~L~~GsllvM~g~~q~~w~--------H~Ip~~~~~~~~RislTFR 200 (204)
T 3s57_A 157 VAVVRLPLAHGSLLMMNHPTNTHWY--------HSLPVRKKVLAPRVNLTFR 200 (204)
T ss_dssp CCCEEEEECTTEEEEEETTHHHHEE--------EEECCCTTCCSCEEEEEEE
T ss_pred CceEEEECCCCCEEEECchhhheeE--------eeccccCCCCCCEEEEEee
Confidence 3678999999999999999877776 444332 23579999874
No 14
>3itq_A Prolyl 4-hydroxylase, alpha subunit domain protei; double-stranded beta helix, alpha-keto dependent non-heme iron oxygenase; 1.40A {Bacillus anthracis str}
Probab=79.97 E-value=5.5 Score=33.90 Aligned_cols=104 Identities=13% Similarity=0.068 Sum_probs=59.3
Q ss_pred HHHHHHHHHcCCCCCccccccccCCceeeEeecCCCCCCCCCcccccCCCCCC-----------ceEEEEc--CC-CCcc
Q 039524 154 RLMHVLVKGLNVKRIDEIREPMLLGSRRVNLNYYPMCPNPELTVGVGRHSDIS-----------TFTILLQ--DD-IGGL 219 (331)
Q Consensus 154 ~ll~~la~~Lgl~~~~~~~~~~~~~~~~lr~~~Yp~~~~~~~~~g~~~HtD~~-----------~lTlL~q--d~-~~GL 219 (331)
+|.+-|+..+|++ .+. .-.+++++|.+-.. ..+|.|+. .+|+++. |. .||=
T Consensus 94 ~i~~Ri~~~~gl~-~~~--------~E~lqv~~Y~~G~~------y~~H~D~~~~~~~~~~~~R~~T~l~YLnd~~~GGe 158 (216)
T 3itq_A 94 KIEKRISSIMNVP-ASH--------GEGLHILNYEVDQQ------YKAHYDYFAEHSRSAANNRISTLVMYLNDVEEGGE 158 (216)
T ss_dssp HHHHHHHHHHTSC-GGG--------BCCCEEEEECBTCC------EEEECSSCCTTSGGGGGCEEEEEEEECSCCSEECC
T ss_pred HHHHHHHHhcCce-ecc--------ccceeEEEeCCCCc------cccccCCCcCCCcccCCceEEEEEEecccCCcCce
Confidence 4444455557887 321 12466777765221 34566653 4777765 22 2342
Q ss_pred ccccCCCCCeEEecCCCCeEEEEcchhhHHhhCCcc-ccccceeecCCCCCeeeeeeeeCC
Q 039524 220 HVRKDSGNDWIHVAPISGSLIINIGDALQIMSNGRY-KSIEHCVIANGSQNRISVPLFVNP 279 (331)
Q Consensus 220 qV~~~~~g~W~~V~~~pg~lvVniGd~l~~~TnG~~-~s~~HRV~~~~~~~R~Si~~F~~p 279 (331)
-+... .=+.|.|..|.+|+.-.-. .+|.. ..++|+|..-....|+++..+++-
T Consensus 159 T~Fp~---~~~~V~P~~G~al~f~~~~----~~g~~d~~~lH~~~PV~~G~K~v~~~W~~~ 212 (216)
T 3itq_A 159 TFFPK---LNLSVHPRKGMAVYFEYFY----QDQSLNELTLHGGAPVTKGEKWIATQWVRR 212 (216)
T ss_dssp EEETT---TTEEECCCTTCEEEEECCC----SSHHHHHTTCEEECCEEESCEEEEEEEEES
T ss_pred eEecC---CCCEEecCCCeEEEEeccC----CCCCCCCccccccceeccccEEEEEeeEec
Confidence 23322 1278999999888764311 12221 468999876445689999887753
No 15
>3tht_A Alkylated DNA repair protein ALKB homolog 8; structural genomics, PSI-biology, northeast structural genom consortium, NESG; HET: AKG; 3.01A {Homo sapiens} PDB: 3thp_A*
Probab=73.87 E-value=4.1 Score=37.36 Aligned_cols=94 Identities=16% Similarity=0.123 Sum_probs=60.2
Q ss_pred eeeEeecCCCCCCCCCcccccCCCCCC------ceEEEEcCCCCccccccCCCCCeEEecCCCCeEEEEcchhhHHhhCC
Q 039524 180 RRVNLNYYPMCPNPELTVGVGRHSDIS------TFTILLQDDIGGLHVRKDSGNDWIHVAPISGSLIINIGDALQIMSNG 253 (331)
Q Consensus 180 ~~lr~~~Yp~~~~~~~~~g~~~HtD~~------~lTlL~qd~~~GLqV~~~~~g~W~~V~~~pg~lvVniGd~l~~~TnG 253 (331)
..+-+|+|.+- . ++++|.|-. ..|+-+-. ..=+.+... +|.++.+...+|+++|.-|++=..|..|
T Consensus 198 n~~lvN~Y~~G-----~-~I~~H~D~~~~~~~~I~slSLG~-~~~f~f~~~-~~~~~~l~L~~gsLlvM~G~~r~~w~H~ 269 (345)
T 3tht_A 198 DQMTINQYEPG-----Q-GIPAHIDTHSAFEDEIVSLSLGS-EIVMDFKHP-DGIAVPVMLPRRSLLVMTGESRYLWTHG 269 (345)
T ss_dssp SEEEEEEECTT-----C-CEEEECCCTTTBCSCEEEEEESS-CEEEEEECT-TSCEEEEEECTTEEEEECTHHHHTSEEE
T ss_pred CEEEEEEecCC-----C-CEeeccCCchhcCCeEEEEECCC-ceeEEEccC-CCceEEEEcCCCcEEEEChHHhhceEcc
Confidence 34567889761 2 688899884 33333321 122444432 1779999999999999999999999777
Q ss_pred ccccccceeec------------------CCCCCeeeeeeeeCCCC
Q 039524 254 RYKSIEHCVIA------------------NGSQNRISVPLFVNPKP 281 (331)
Q Consensus 254 ~~~s~~HRV~~------------------~~~~~R~Si~~F~~p~~ 281 (331)
.-+-...-+-. .....|+|+.|=.-++.
T Consensus 270 I~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~r~~RiSlT~R~v~~~ 315 (345)
T 3tht_A 270 ITCRKFDTVQASESLKSGIITSDVGDLTLSKRGLRTSFTFRKVRQT 315 (345)
T ss_dssp ECCCSEEEEESGGGSSCEECCSSSSCEEEEECCCEEEEEEECBCSS
T ss_pred CCcccCCccCcccccccccccccCCCceeccCCCEEEEEEEecCCC
Confidence 65544333211 01236999998765554
No 16
>2opi_A L-fuculose-1-phosphate aldolase; L-fuculose-1-phosphate aldolas structural genomics, PSI-2, protein structure initiative; 2.50A {Bacteroides thetaiotaomicron}
Probab=64.01 E-value=4 Score=34.48 Aligned_cols=36 Identities=33% Similarity=0.461 Sum_probs=32.0
Q ss_pred CccEEeCCCCCCHHHHHHHHHHhHhcceEEEEcCCC
Q 039524 28 SIPLIDMSNWESPEVAKSICDAAENWGFFQIVNHGV 63 (331)
Q Consensus 28 ~iPvIDl~~~~~~~~~~~l~~A~~~~Gff~l~nhgi 63 (331)
.||++++..++..++++.+.+++.+.-.+.|.|||+
T Consensus 125 ~v~~~~y~~~g~~~la~~i~~~l~~~~avll~nHG~ 160 (212)
T 2opi_A 125 EIPVIPYYRPGSPELAKAVVEAMLKHNSVLLTNHGQ 160 (212)
T ss_dssp CCCEECCCCTTCHHHHHHHHHHTSSCSEEEETTTEE
T ss_pred CeEEEcCCCCCcHHHHHHHHHHhccCCEEEEcCCCc
Confidence 799999977677788999999999888999999996
No 17
>2fk5_A Fuculose-1-phosphate aldolase; class II aldolase, metal binding, riken structural genomics/proteomics initiative, RSGI, NPPSFA; 1.90A {Thermus thermophilus} PDB: 2flf_A
Probab=58.27 E-value=6.5 Score=32.89 Aligned_cols=37 Identities=19% Similarity=0.282 Sum_probs=31.9
Q ss_pred CCccEE-eCCCCCCHHHHHHHHHHhHhcceEEEEcCCC
Q 039524 27 VSIPLI-DMSNWESPEVAKSICDAAENWGFFQIVNHGV 63 (331)
Q Consensus 27 ~~iPvI-Dl~~~~~~~~~~~l~~A~~~~Gff~l~nhgi 63 (331)
..||++ ++..++..++++.+.+++.+.-.+.|.|||+
T Consensus 116 ~~ip~~~~y~~~g~~ela~~i~~~l~~~~avll~nHG~ 153 (200)
T 2fk5_A 116 KEVPVLAPKTVSATEEAALSVAEALREHRACLLRGHGA 153 (200)
T ss_dssp SCEEEECCSCCSSSHHHHHHHHHHHHHCSEEEETTTEE
T ss_pred CCceEecCCCCCCcHHHHHHHHHHhCcCCEEEECCCCc
Confidence 379999 8876677788999999999988999999995
No 18
>1pvt_A Sugar-phosphate aldolase; structural genomics, PSI, protein initiative, midwest center for structural genomics, MCSG; 2.50A {Thermotoga maritima} SCOP: c.74.1.1
Probab=57.67 E-value=7 Score=33.60 Aligned_cols=37 Identities=19% Similarity=0.215 Sum_probs=32.5
Q ss_pred CCccEEeCCCCCCHHHHHHHHHHhHhcceEEEEcCCC
Q 039524 27 VSIPLIDMSNWESPEVAKSICDAAENWGFFQIVNHGV 63 (331)
Q Consensus 27 ~~iPvIDl~~~~~~~~~~~l~~A~~~~Gff~l~nhgi 63 (331)
..||++++..++..++++.+.+++.+.-.+.+.|||+
T Consensus 160 ~~v~~~~y~~~g~~ela~~i~~~l~~~~avll~nHG~ 196 (238)
T 1pvt_A 160 QGISVVEFEKPGSVELGLKTVEKSEGKDAVLWDKHGV 196 (238)
T ss_dssp SCCEEECCCSTTCHHHHHHHHHHTSSCSEEEETTSCE
T ss_pred CCceEecCCCCCcHHHHHHHHHHhccCCEEEEcCCCc
Confidence 4699999977677788999999999988999999996
No 19
>1e4c_P L-fuculose 1-phosphate aldolase; aldolase (class II), bacterial L-fucose metabolism; 1.66A {Escherichia coli} SCOP: c.74.1.1 PDB: 1fua_A 2fua_A 3fua_A 4fua_A* 1dzv_P 1e4b_P 1e47_P* 1e48_P* 1dzz_P 1e46_P 1dzu_P 1dzy_P 1dzx_P 1dzw_P 1e49_P 1e4a_P
Probab=57.16 E-value=6.2 Score=33.35 Aligned_cols=37 Identities=22% Similarity=0.315 Sum_probs=32.0
Q ss_pred CCccEEeCCCCCCHHHHHHHHHHhHhcceEEEEcCCC
Q 039524 27 VSIPLIDMSNWESPEVAKSICDAAENWGFFQIVNHGV 63 (331)
Q Consensus 27 ~~iPvIDl~~~~~~~~~~~l~~A~~~~Gff~l~nhgi 63 (331)
..||++++..++..++++.+.+++.+.-.+.|.|||+
T Consensus 121 ~~ip~~~y~~~g~~~la~~i~~~l~~~~avll~nHG~ 157 (215)
T 1e4c_P 121 NSIPCAPYATFGTRELSEHVALALKNRKATLLQHHGL 157 (215)
T ss_dssp SCBCEECCCCTTCHHHHHHHHHHTSSCSEEEETTTEE
T ss_pred CCcceeeCCCCCcHHHHHHHHHHhccCCEEEEcCCCc
Confidence 3799999977667788899999999888999999996
No 20
>2v9l_A Rhamnulose-1-phosphate aldolase; entropy index, metal-binding, oligomerization, zinc, lyase, class II, cytoplasm; HET: PGO; 1.23A {Escherichia coli} PDB: 2uyv_A* 1ojr_A 2v9g_A* 1gt7_A* 2v9n_A* 2uyu_A* 2v9m_A* 2v9o_A 2v9e_A 2v9f_A 2v9i_A 2v29_A 2v2a_A* 2v2b_A
Probab=51.47 E-value=7.6 Score=34.23 Aligned_cols=36 Identities=8% Similarity=0.145 Sum_probs=32.2
Q ss_pred CccEEeCCCCCCHHHHHHHHHHhHhcceEEEEcCCC
Q 039524 28 SIPLIDMSNWESPEVAKSICDAAENWGFFQIVNHGV 63 (331)
Q Consensus 28 ~iPvIDl~~~~~~~~~~~l~~A~~~~Gff~l~nhgi 63 (331)
.||++++..++..+.++.+.+++.+.-.+.+.|||+
T Consensus 179 ~v~v~~y~~~g~~ela~~i~~~l~~~~avll~nHG~ 214 (274)
T 2v9l_A 179 GVGILPWMVPGTDAIGQATAQEMQKHSLVLWPFHGV 214 (274)
T ss_dssp CEEECCCCCSSSHHHHHHHHHHHTTCSEEEETTTEE
T ss_pred ceeEecCCCCCCHHHHHHHHHHHccCCEEEEcCCCc
Confidence 699999876677789999999999999999999996
No 21
>3o2g_A Gamma-butyrobetaine dioxygenase; gamma-butyrobetaine hydroxylase, 2-OXOG dioxygenase 1, oxidoreductase, structural genomics; HET: OGA NM2; 1.78A {Homo sapiens} PDB: 3ms5_A* 3n6w_A
Probab=46.47 E-value=11 Score=34.96 Aligned_cols=51 Identities=16% Similarity=0.182 Sum_probs=39.7
Q ss_pred CccEEeCCC-CCCHHHHHHHHHHhHhcceEEEEcCCCCHHHHHHHHHHHHHhcCC
Q 039524 28 SIPLIDMSN-WESPEVAKSICDAAENWGFFQIVNHGVPLEVLERVKEATHRFFAL 81 (331)
Q Consensus 28 ~iPvIDl~~-~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~l 81 (331)
++|.||++. -.+++.+.++.+|+.++|++.+.+-.++.+ ...+.+++|=.+
T Consensus 122 ~~~~~~~~~~l~~d~~~~~~~~~l~~~Gvv~frg~~~~~~---~~~~~a~~~G~l 173 (388)
T 3o2g_A 122 QLPTLDFEDVLRYDEHAYKWLSTLKKVGIVRLTGASDKPG---EVSKLGKRMGFL 173 (388)
T ss_dssp CCCEEEHHHHHHCHHHHHHHHHHHHHHSEEEEECCCSSTT---HHHHHHHHHSCC
T ss_pred CCCccCHHHHhcCHHHHHHHHHHHHhcCEEEEeCCCCCHH---HHHHHHHHhCCC
Confidence 689999976 234678899999999999999999988754 444567776544
No 22
>1otj_A Alpha-ketoglutarate-dependent taurine dioxygenase; jelly roll motif, alpha ketoglutarate-dependent dioxygenase, oxidoreductase; 1.90A {Escherichia coli} SCOP: b.82.2.5 PDB: 1gqw_A* 1os7_A* 1gy9_A
Probab=45.24 E-value=18 Score=31.57 Aligned_cols=52 Identities=12% Similarity=0.102 Sum_probs=38.9
Q ss_pred CCCccEEeCCCCCCHHHHHHHHHHhHhcceEEEEcCCCCHHHHHHHHHHHHHhcC
Q 039524 26 QVSIPLIDMSNWESPEVAKSICDAAENWGFFQIVNHGVPLEVLERVKEATHRFFA 80 (331)
Q Consensus 26 ~~~iPvIDl~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~ 80 (331)
.++|+-||++..-..+..++|.+++.++|++.+.+-.++.+ +..+.+++|=.
T Consensus 15 Gaei~gvdl~~~l~~~~~~~l~~~l~~~Gvv~frg~~~~~~---~~~~~~~~~G~ 66 (283)
T 1otj_A 15 GAQISGADLTRPLSDNQFEQLYHAVLRHQVVFLRDQAITPQ---QQRALAQRFGE 66 (283)
T ss_dssp CEEEESCCSSSCCCHHHHHHHHHHHHHHSEEEECSCCCCHH---HHHHHHHTTSC
T ss_pred eEEEECCCcCccCCHHHHHHHHHHHHHCCEEEECCCCCCHH---HHHHHHHHhCC
Confidence 44677788876335677899999999999999999888764 34456666543
No 23
>2dbn_A Hypothetical protein YBIU; alpha/beta structure, structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Escherichia coli} PDB: 2dbi_A 2csg_A*
Probab=42.48 E-value=7.3 Score=36.91 Aligned_cols=55 Identities=13% Similarity=0.200 Sum_probs=39.4
Q ss_pred CCCCccEEeCCCCCCHHHHHHHHHHhHhcceEEEEcCCCCHHHHHHHHHHHHHhcC
Q 039524 25 DQVSIPLIDMSNWESPEVAKSICDAAENWGFFQIVNHGVPLEVLERVKEATHRFFA 80 (331)
Q Consensus 25 ~~~~iPvIDl~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~ 80 (331)
...-||.||++.-....+.++..+.+++.|++.|.|. ||.+......+.+.+|.+
T Consensus 97 G~~~iP~i~f~di~~~~~s~~~~~~ir~rG~vVIRgv-vp~e~A~~~~~~~~~yl~ 151 (461)
T 2dbn_A 97 GDAVWPVLSYADIKAGHVTAEQREQIKRRGCAVIKGH-FPREQALGWDQSMLDYLD 151 (461)
T ss_dssp TCCSSCEEEHHHHHHTCCCHHHHHHHHHHSEEEEETS-SCHHHHHHHHHHHHHHHH
T ss_pred CCCCcceecHHHhcCCCCCHHHHHHHHhccEEEECCC-CCHHHHHHHHHHHHHHHH
Confidence 4568999999760000123455678899999999988 899887777777777753
No 24
>2irp_A Putative aldolase class 2 protein AQ_1979; aldehyde, enzymatic mechanism; 2.40A {Aquifex aeolicus}
Probab=39.62 E-value=13 Score=31.02 Aligned_cols=36 Identities=25% Similarity=0.345 Sum_probs=29.3
Q ss_pred CCccEEeCCCCCCHHHHHHHHHHhHhcc---eEEEEcCCC
Q 039524 27 VSIPLIDMSNWESPEVAKSICDAAENWG---FFQIVNHGV 63 (331)
Q Consensus 27 ~~iPvIDl~~~~~~~~~~~l~~A~~~~G---ff~l~nhgi 63 (331)
..||+++.. ++.++.++.+.+++.+.+ .+.|.|||+
T Consensus 138 ~~vp~~~~~-~g~~~La~~i~~~l~~~~~~~avll~nHG~ 176 (208)
T 2irp_A 138 IKIPIFPNE-QNIPLLAKEVENYFKTSEDKYGFLIRGHGL 176 (208)
T ss_dssp CEEEEECCC-SCHHHHHHHHHHHHHHCSCCSCEEETTTEE
T ss_pred cceeeecCC-CCHHHHHHHHHHHHhcCCCceEEEEcCCCC
Confidence 369999885 466688889999998875 789999996
No 25
>1m5a_B Insulin B chain; alpha helices, beta sheets, 3(10) helices, disulphide bridge hormone-growth factor complex; 1.20A {Sus scrofa} SCOP: g.1.1.1 PDB: 1aph_B 1b18_B 1b19_B 1b2a_B 1b2b_B 1b2c_B 1b2d_B 1b2e_B 1b2f_B 1b2g_B 1bph_B 1cph_B 1dph_B 1b17_B 1mpj_B 1wav_B 1zni_B 2a3g_B 2bn1_B 2bn3_B ...
Probab=39.62 E-value=32 Score=19.40 Aligned_cols=18 Identities=17% Similarity=0.396 Sum_probs=15.9
Q ss_pred HHHHHHHHHHhHhcceEE
Q 039524 40 PEVAKSICDAAENWGFFQ 57 (331)
Q Consensus 40 ~~~~~~l~~A~~~~Gff~ 57 (331)
..+++.|.-.|.+-|||+
T Consensus 9 s~LVdaL~~vCgdRGF~~ 26 (30)
T 1m5a_B 9 SHLVEALYLVCGERGFFY 26 (30)
T ss_dssp HHHHHHHHHHHGGGCEEE
T ss_pred HHHHHHHHHHhccCcccc
Confidence 567888999999999998
No 26
>1oih_A Putative alkylsulfatase ATSK; non-heme Fe(II) alphaketoglutarate dependent dioxygenase, jelly roll, oxidoreductase; 1.89A {Pseudomonas putida} SCOP: b.82.2.5 PDB: 1oii_A* 1oij_B* 1vz4_A 1vz5_A 1oik_A* 1oij_A* 1oij_C*
Probab=39.58 E-value=25 Score=30.95 Aligned_cols=53 Identities=8% Similarity=-0.081 Sum_probs=39.5
Q ss_pred CCCccEEeCCCCCCHHHHHHHHHHhHhcceEEEEcCC-CCHHHHHHHHHHHHHhcCC
Q 039524 26 QVSIPLIDMSNWESPEVAKSICDAAENWGFFQIVNHG-VPLEVLERVKEATHRFFAL 81 (331)
Q Consensus 26 ~~~iPvIDl~~~~~~~~~~~l~~A~~~~Gff~l~nhg-i~~~~~~~~~~~~~~fF~l 81 (331)
.++|+-||++..-..+..++|.+++.++|++.+.+-. ++. ++..+.+++|=.+
T Consensus 25 Gaei~gvdl~~~l~~~~~~~l~~~l~~~Gvv~fRg~~~l~~---~~~~~~~~~fG~l 78 (301)
T 1oih_A 25 GAEIRGVKLSPDLDAATVEAIQAALVRHKVIFFRGQTHLDD---QSQEGFAKLLGEP 78 (301)
T ss_dssp CEEEESCCCCTTCCHHHHHHHHHHHHHHSEEEECCCTTCCH---HHHHHHHHTTSCB
T ss_pred ceEEeCCCccccCCHHHHHHHHHHHHHCCEEEECCCCCCCH---HHHHHHHHHhCCC
Confidence 3456777887633567789999999999999999987 875 4555667776543
No 27
>3ocr_A Class II aldolase/adducin domain protein; PSI-2, midwest center for structural genomics, protein struc initiative, MCSG, lyase; 1.95A {Pseudomonas syringae PV}
Probab=38.28 E-value=19 Score=31.72 Aligned_cols=37 Identities=8% Similarity=0.105 Sum_probs=31.7
Q ss_pred CCccEEeCCCCC-CHHHHHHHHHHhHhcceEEEEcCCC
Q 039524 27 VSIPLIDMSNWE-SPEVAKSICDAAENWGFFQIVNHGV 63 (331)
Q Consensus 27 ~~iPvIDl~~~~-~~~~~~~l~~A~~~~Gff~l~nhgi 63 (331)
..||++|+.... ..++.+.+.+++.+.-.+.|.|||+
T Consensus 155 g~v~~~~y~~~~~~~el~~~i~~~l~~~~avlL~nHG~ 192 (273)
T 3ocr_A 155 GRVAYHGYEGIALDLSERERLVADLGDKSVMILRNHGL 192 (273)
T ss_dssp TTEEEECCCCSSCCHHHHHHHHHHHTTCSEEEETTTEE
T ss_pred CCEEEECCCCCCCCHHHHHHHHHHhCcCCEEEEcCCce
Confidence 469999987643 6788999999999999999999996
No 28
>4ay7_A Methylcobalamin\: coenzyme M methyltransferase; TIM barrel; 1.80A {Methanosarcina mazei} PDB: 4ay8_A
Probab=31.95 E-value=73 Score=28.60 Aligned_cols=42 Identities=19% Similarity=0.190 Sum_probs=33.8
Q ss_pred CHHHHHHHHHHhHhcceEEEEcCCCC----HHHHHHHHHHHHHhcC
Q 039524 39 SPEVAKSICDAAENWGFFQIVNHGVP----LEVLERVKEATHRFFA 80 (331)
Q Consensus 39 ~~~~~~~l~~A~~~~Gff~l~nhgi~----~~~~~~~~~~~~~fF~ 80 (331)
.+++.+.+.+.++.-||..=.+|||+ .+-+..+++++++|++
T Consensus 303 ~e~i~~~v~~~l~~~g~I~~~Ghgi~p~tp~env~a~v~av~ey~A 348 (348)
T 4ay7_A 303 VDKIKAEAKEALEGGIDVLAPGCGIAPMTPLENVKALVAARDEFYA 348 (348)
T ss_dssp HHHHHHHHHHHHHTTCSEEEESSSCCTTCCHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHhCCCCEEeCCCccCCCCCHHHHHHHHHHHHHhcC
Confidence 35566778888888888777889875 5789999999999975
No 29
>3pvj_A Alpha-ketoglutarate-dependent taurine dioxygenase; jelly roll motif, Fe(II) binding, oxidoreductas; 1.85A {Pseudomonas putida KT2440} SCOP: b.82.2.5 PDB: 3v15_A 3v17_A*
Probab=31.48 E-value=35 Score=29.82 Aligned_cols=52 Identities=19% Similarity=0.117 Sum_probs=39.7
Q ss_pred CCCccEEeCCCCCCHHHHHHHHHHhHhcceEEEEcCCCCHHHHHHHHHHHHHhcC
Q 039524 26 QVSIPLIDMSNWESPEVAKSICDAAENWGFFQIVNHGVPLEVLERVKEATHRFFA 80 (331)
Q Consensus 26 ~~~iPvIDl~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~ 80 (331)
.++|.=|||+..-.++..++|.+|+.++|.+.+.+-.++.+ +..+.+++|=.
T Consensus 13 Gaei~gvdl~~~l~~~~~~~l~~~l~~~gvv~fR~q~l~~~---~~~~fa~~fG~ 64 (277)
T 3pvj_A 13 GAQISGVDISRDISAEERDAIEQALLQHQVLFLRDQPINPE---QQARFAARFGD 64 (277)
T ss_dssp CEEEESCCTTSCCCHHHHHHHHHHHHHHSEEEESSCCCCHH---HHHHHHGGGSC
T ss_pred eEEEeCCCccccCCHHHHHHHHHHHHHCCEEEECCCCCCHH---HHHHHHHHhCC
Confidence 45677788876346778899999999999999999988764 44456666543
No 30
>3r1j_A Alpha-ketoglutarate-dependent taurine dioxygenase; ssgcid, oxidoreductase, structural genomics; 2.05A {Mycobacterium avium} SCOP: b.82.2.0 PDB: 3swt_A
Probab=31.40 E-value=43 Score=29.68 Aligned_cols=53 Identities=8% Similarity=-0.076 Sum_probs=40.5
Q ss_pred CCCccEEeCCCCCCHHHHHHHHHHhHhcceEEEEcC-CCCHHHHHHHHHHHHHhcCC
Q 039524 26 QVSIPLIDMSNWESPEVAKSICDAAENWGFFQIVNH-GVPLEVLERVKEATHRFFAL 81 (331)
Q Consensus 26 ~~~iPvIDl~~~~~~~~~~~l~~A~~~~Gff~l~nh-gi~~~~~~~~~~~~~~fF~l 81 (331)
.++|+=|||+..-.++..++|.+|+.++|.+.+.+- .++.+ +..+.+++|=.+
T Consensus 19 Gaei~gvdl~~~L~d~~~~~l~~al~~~gvv~fR~q~~l~~~---~~~~fa~~fG~l 72 (301)
T 3r1j_A 19 GARVDGVRLGGDLDDATVEQIRRALLTHKVIFFRHQHHLDDS---RQLEFARLLGTP 72 (301)
T ss_dssp CEEEESCCCSTTCCHHHHHHHHHHHHHHSEEEECCCTTCCHH---HHHHHHHHHSCB
T ss_pred cceEeCCCccccCCHHHHHHHHHHHHHCCEEEECCCCCCCHH---HHHHHHHhcCCc
Confidence 456777888854467788999999999999999998 78764 445667776443
No 31
>3m4r_A Uncharacterized protein; short chain dehydrogenase, class II aldolase, adducin head D carbohydrate metabolism, structural genomics; 2.00A {Thermoplasma acidophilum}
Probab=25.26 E-value=26 Score=29.68 Aligned_cols=34 Identities=12% Similarity=0.122 Sum_probs=27.6
Q ss_pred ccEEeCCCCCCHHHHHHHHHHhHhc-ceEEEEcCCC
Q 039524 29 IPLIDMSNWESPEVAKSICDAAENW-GFFQIVNHGV 63 (331)
Q Consensus 29 iPvIDl~~~~~~~~~~~l~~A~~~~-Gff~l~nhgi 63 (331)
||++++..++. ++.+++.+++.+. -.+.|.|||+
T Consensus 156 v~~~~y~~~g~-ela~~i~~~l~~~~~avlL~nHG~ 190 (222)
T 3m4r_A 156 VVVLPYIPPGF-TLAKEVMNCFKKGIDGIVLRKHGL 190 (222)
T ss_dssp EEEECCCCSSH-HHHHHHHHHCCTTCSEEEETTTEE
T ss_pred ceecCCcCCcH-HHHHHHHHHHhcCCCEEEECCCCC
Confidence 89999877544 7889999999864 6788999996
No 32
>2qt7_A Receptor-type tyrosine-protein phosphatase-like N; IA-2, ICA-512, protein-tyrosine phosphatase, transmembrane protein, diabetes, autoimmunity; 1.30A {Homo sapiens} PDB: 3n01_A 3np5_A 3ng8_A 3n4w_A
Probab=23.64 E-value=63 Score=23.33 Aligned_cols=33 Identities=6% Similarity=0.059 Sum_probs=26.5
Q ss_pred HHHHHHHHHHHHcCCCCCccccccc-cCCceeeEe
Q 039524 151 LIRRLMHVLVKGLNVKRIDEIREPM-LLGSRRVNL 184 (331)
Q Consensus 151 la~~ll~~la~~Lgl~~~~~~~~~~-~~~~~~lr~ 184 (331)
=+.+|++.+|+.|+++ .+.|.+.- .++...+|+
T Consensus 18 eG~~l~~~la~ll~l~-~~~Ft~i~V~g~aVTFrV 51 (91)
T 2qt7_A 18 AGVKLLEILAEHVHMS-SGSFINISVVGPALTFRI 51 (91)
T ss_dssp HHHHHHHHHHHHHTSC-GGGEEEEEEETTEEEEEE
T ss_pred HHHHHHHHHHHHhcCC-ccceeeeEeecceEEEEe
Confidence 3678999999999999 89998864 446667777
No 33
>2x4k_A 4-oxalocrotonate tautomerase; isomerase; 1.10A {Staphylococcus aureus}
Probab=23.36 E-value=73 Score=20.01 Aligned_cols=25 Identities=12% Similarity=0.159 Sum_probs=20.3
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCCccc
Q 039524 146 KSSEVLIRRLMHVLVKGLNVKRIDEI 171 (331)
Q Consensus 146 ~~~~~la~~ll~~la~~Lgl~~~~~~ 171 (331)
++-.+|+..|.+++++.||.+ ++..
T Consensus 17 e~k~~l~~~l~~~l~~~lg~p-~~~v 41 (63)
T 2x4k_A 17 EQLKNLVSEVTDAVEKTTGAN-RQAI 41 (63)
T ss_dssp HHHHHHHHHHHHHHHHHHCCC-GGGC
T ss_pred HHHHHHHHHHHHHHHHHhCcC-cccE
Confidence 345678999999999999999 6654
No 34
>2rdq_A 1-deoxypentalenic acid 11-beta hydroxylase; Fe(II ketoglutarate dependent hydroxylase...; double stranded barrel helix, dioxygenase; HET: AKG; 1.31A {Streptomyces avermitilis} PDB: 2rdn_A* 2rdr_A* 2rds_A*
Probab=22.93 E-value=78 Score=27.23 Aligned_cols=35 Identities=14% Similarity=0.226 Sum_probs=29.8
Q ss_pred HHHHHHhHhcceEEEEcCCCCHHHHHHHHHHHHHhc
Q 039524 44 KSICDAAENWGFFQIVNHGVPLEVLERVKEATHRFF 79 (331)
Q Consensus 44 ~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF 79 (331)
+++.+.+.+.||+.|.|- ++.+.++++.+.+.+++
T Consensus 22 ~~~~~~f~~dGyvvl~~~-l~~e~v~~l~~~~~~~~ 56 (288)
T 2rdq_A 22 AALDSFYEEHGYLFLRNV-LDRDLVKTVAEQMREGL 56 (288)
T ss_dssp HHHHHHHHHHSEEEECSC-SCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCEEEEeCC-CCHHHHHHHHHHHHHHH
Confidence 457789999999999876 89999999999888775
No 35
>2z7b_A MLR6791 protein; class II aldolase superfamily, lyase; 1.90A {Mesorhizobium loti}
Probab=21.29 E-value=30 Score=30.29 Aligned_cols=37 Identities=24% Similarity=0.468 Sum_probs=30.2
Q ss_pred CCccEEeCCC---------CCCHHHHHHHHHHhHhcceEEEEcCCC
Q 039524 27 VSIPLIDMSN---------WESPEVAKSICDAAENWGFFQIVNHGV 63 (331)
Q Consensus 27 ~~iPvIDl~~---------~~~~~~~~~l~~A~~~~Gff~l~nhgi 63 (331)
..||++++.. ....++.+.+.+++.+.-.+.|.|||+
T Consensus 156 ~~vpv~~y~~~~g~~~~~~~~s~ela~~ia~~l~~~~avLL~nHG~ 201 (270)
T 2z7b_A 156 ESVPVYEIRDKHGDETDLFGGSPDVCADIAESLGSQTVVLMARHGV 201 (270)
T ss_dssp SCCCEECTHHHHCSCSCCCCCSHHHHHHHHHHHTTSSEEEETTTEE
T ss_pred CCCceecccccCCcccccccCCHHHHHHHHHHhccCCEEEEcCCce
Confidence 3699999641 236788999999999988999999996
No 36
>3kt7_A PKHD-type hydroxylase TPA1; double-stranded beta helix fold, dioxygenase, iron, mRNP complex, prolyl hydroxylase; HET: AKG; 1.77A {Saccharomyces cerevisiae} PDB: 3kt1_A 3kt4_A 3mgu_A
Probab=21.09 E-value=1.7e+02 Score=28.81 Aligned_cols=107 Identities=13% Similarity=0.092 Sum_probs=58.5
Q ss_pred HHHHHHHHHHcCCCCCccccccccCCceeeEeecCCCCCCCCCcccccCCCCC-C--ceEEEEc-C---------CCCcc
Q 039524 153 RRLMHVLVKGLNVKRIDEIREPMLLGSRRVNLNYYPMCPNPELTVGVGRHSDI-S--TFTILLQ-D---------DIGGL 219 (331)
Q Consensus 153 ~~ll~~la~~Lgl~~~~~~~~~~~~~~~~lr~~~Yp~~~~~~~~~g~~~HtD~-~--~lTlL~q-d---------~~~GL 219 (331)
..++..|+...|++ . + .+...-+.+..|++-. -...|.|. + .+|+++. + ..|-|
T Consensus 104 ~~Fr~~Ls~iTGi~-~--L----sg~~~D~~~a~Y~~G~------fL~~H~D~~~~RrvS~VLYLN~pd~~W~~e~GGeL 170 (633)
T 3kt7_A 104 KQYRDFFGYVTKAG-K--L----SGSKTDMSINTYTKGC------HLLTHDDVIGSRRISFILYLPDPDRKWKSHYGGGL 170 (633)
T ss_dssp HHHHHHHHHHHTCC-C--C----CSSCCCEEEEEECTTC------EEEEECCCCTTEEEEEEEECSCTTSCCCGGGBCCE
T ss_pred HHHHHHHHHHhCCc-c--c----CCCceeEEEEEeCCCC------eeeecCCCCCCeEEEEEEEcCCCCCCCCccCCceE
Confidence 34556677777774 1 0 0111124556675421 25568884 2 3555542 1 13447
Q ss_pred ccccCC------CCCeEEecCCCCeEEEEcchhhHHhhCCccccccceeecC-CCCCeeeeeeee-CCCC
Q 039524 220 HVRKDS------GNDWIHVAPISGSLIINIGDALQIMSNGRYKSIEHCVIAN-GSQNRISVPLFV-NPKP 281 (331)
Q Consensus 220 qV~~~~------~g~W~~V~~~pg~lvVniGd~l~~~TnG~~~s~~HRV~~~-~~~~R~Si~~F~-~p~~ 281 (331)
+++... ......|.|.-|.+|+..-.- + ..+|.|..- ....|+||+-.+ .|..
T Consensus 171 ~Lyd~d~~~~P~~d~~~~I~P~fNrLV~F~vsp------~---~S~H~V~eV~~~~~RlSItGWF~~p~~ 231 (633)
T 3kt7_A 171 RLFPSILPNVPHSDPSAKLVPQFNQIAFFKVLP------G---FSFHDXEEVKVDKHRLSIQGWYHIPQV 231 (633)
T ss_dssp EECCEEETTEECSSCSEEECCCTTEEEEEECCT------T---TCCEEECCBCSSCCEEEEEEEEECCCT
T ss_pred EEecCCCcCCCCCCceEEEecCCCeEEEEEcCC------C---CCcCCCCccCCCCCEEEEEEEeccCCC
Confidence 777421 134778999999999874210 1 247866321 267899997655 4443
No 37
>3abf_A 4-oxalocrotonate tautomerase; isomerase; 1.94A {Thermus thermophilus}
Probab=21.09 E-value=99 Score=19.61 Aligned_cols=24 Identities=25% Similarity=0.380 Sum_probs=19.6
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCccc
Q 039524 147 SSEVLIRRLMHVLVKGLNVKRIDEI 171 (331)
Q Consensus 147 ~~~~la~~ll~~la~~Lgl~~~~~~ 171 (331)
+-.+++..|.+++++.||.+ +++.
T Consensus 16 qk~~l~~~lt~~l~~~lg~~-~~~v 39 (64)
T 3abf_A 16 KKRELVRRLTEMASRLLGEP-YEEV 39 (64)
T ss_dssp HHHHHHHHHHHHHHHHTTCC-GGGE
T ss_pred HHHHHHHHHHHHHHHHhCCC-cccE
Confidence 34678899999999999999 6654
No 38
>4hti_A Receptor-type tyrosine-protein phosphatase N2; phogrin, IA-2BETA, protein-tyrosine phosphatase, transmembra protein, diabetes, autoimmunity; 1.95A {Homo sapiens} PDB: 4htj_A
Probab=20.29 E-value=94 Score=22.77 Aligned_cols=34 Identities=18% Similarity=0.120 Sum_probs=26.3
Q ss_pred HHHHHHHHHHHcCCCCCccccccc-cCCceeeEeec
Q 039524 152 IRRLMHVLVKGLNVKRIDEIREPM-LLGSRRVNLNY 186 (331)
Q Consensus 152 a~~ll~~la~~Lgl~~~~~~~~~~-~~~~~~lr~~~ 186 (331)
+.+|++.||+.|+++ .+.|.+.- .++...+|+.-
T Consensus 26 G~~l~~~la~~l~l~-~~~F~~isV~g~aVTFrV~~ 60 (99)
T 4hti_A 26 GRRLVEDVARLLQVP-SSAFADVEVLGPAVTFKVSA 60 (99)
T ss_dssp HHHHHHHHHHHTTCC-GGGEEEEEEETTEEEEEECC
T ss_pred HHHHHHHHHHHhCCc-hhheeeeeecCceEEEEecc
Confidence 678899999999999 88888764 34566677643
Done!