Query 039533
Match_columns 949
No_of_seqs 1113 out of 7199
Neff 9.4
Searched_HMMs 46136
Date Fri Mar 29 10:39:41 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/039533.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/039533hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00113 leucine-rich repeat r 100.0 4E-108 9E-113 1036.4 59.7 856 16-935 22-955 (968)
2 PLN00113 leucine-rich repeat r 100.0 3.8E-52 8.2E-57 526.6 23.3 450 66-524 141-609 (968)
3 KOG1187 Serine/threonine prote 100.0 3.3E-49 7.1E-54 432.4 24.9 291 612-934 61-355 (361)
4 KOG0581 Mitogen-activated prot 100.0 2.2E-45 4.9E-50 376.1 17.5 254 627-926 80-334 (364)
5 KOG0192 Tyrosine kinase specif 100.0 1.3E-44 2.9E-49 392.3 22.7 263 629-941 44-313 (362)
6 KOG0595 Serine/threonine-prote 100.0 2.4E-44 5.2E-49 371.1 16.0 277 624-932 8-292 (429)
7 KOG0575 Polo-like serine/threo 100.0 8.6E-44 1.9E-48 385.2 19.5 249 626-927 18-269 (592)
8 KOG0615 Serine/threonine prote 100.0 2.5E-44 5.4E-49 369.8 14.4 252 626-926 172-436 (475)
9 KOG0591 NIMA (never in mitosis 100.0 2.4E-44 5.2E-49 351.3 6.9 262 626-930 19-284 (375)
10 KOG0197 Tyrosine kinases [Sign 100.0 3.6E-43 7.8E-48 377.4 14.5 255 629-934 209-464 (468)
11 KOG0193 Serine/threonine prote 100.0 4.4E-42 9.6E-47 369.3 15.9 274 625-947 391-669 (678)
12 KOG0598 Ribosomal protein S6 k 100.0 9.2E-42 2E-46 349.6 14.0 202 624-845 23-227 (357)
13 KOG0593 Predicted protein kina 100.0 1.3E-41 2.7E-46 335.7 12.0 271 626-926 2-283 (396)
14 KOG0592 3-phosphoinositide-dep 100.0 2E-41 4.4E-46 360.0 14.4 254 622-926 69-337 (604)
15 KOG1026 Nerve growth factor re 100.0 1.9E-41 4E-46 381.6 13.7 269 626-935 486-766 (774)
16 KOG0472 Leucine-rich repeat pr 100.0 4.1E-45 8.9E-50 372.7 -15.3 448 67-545 47-540 (565)
17 KOG0600 Cdc2-related protein k 100.0 9E-41 1.9E-45 352.2 15.9 277 626-926 117-399 (560)
18 KOG0198 MEKK and related serin 100.0 7.2E-41 1.6E-45 351.2 15.1 262 625-931 16-280 (313)
19 KOG0578 p21-activated serine/t 100.0 1.4E-40 3.1E-45 357.4 15.9 250 626-926 273-522 (550)
20 KOG2345 Serine/threonine prote 100.0 5.8E-41 1.3E-45 322.7 10.5 272 624-931 19-300 (302)
21 KOG0661 MAPK related serine/th 100.0 2.9E-41 6.3E-46 353.2 9.2 272 624-927 8-291 (538)
22 KOG4194 Membrane glycoprotein 100.0 1.3E-41 2.8E-46 361.7 6.1 366 140-520 81-449 (873)
23 KOG4194 Membrane glycoprotein 100.0 2.2E-41 4.7E-46 359.9 5.9 390 68-494 55-446 (873)
24 KOG0582 Ste20-like serine/thre 100.0 9.8E-40 2.1E-44 339.1 18.0 263 625-926 25-292 (516)
25 KOG0659 Cdk activating kinase 100.0 8.3E-40 1.8E-44 318.0 16.3 274 626-927 2-281 (318)
26 KOG0585 Ca2+/calmodulin-depend 100.0 1.5E-39 3.2E-44 339.7 16.0 265 622-933 93-378 (576)
27 KOG0597 Serine-threonine prote 100.0 3.6E-40 7.8E-45 349.6 11.1 247 626-926 2-250 (808)
28 cd05102 PTKc_VEGFR3 Catalytic 100.0 4.8E-39 1E-43 357.9 19.9 271 625-933 6-336 (338)
29 KOG0201 Serine/threonine prote 100.0 6.1E-40 1.3E-44 341.0 11.0 250 625-926 12-262 (467)
30 KOG0660 Mitogen-activated prot 100.0 1.3E-39 2.9E-44 332.2 13.3 286 623-927 19-310 (359)
31 KOG0472 Leucine-rich repeat pr 100.0 7.4E-43 1.6E-47 356.2 -12.2 427 66-523 69-541 (565)
32 KOG0583 Serine/threonine prote 100.0 8.9E-39 1.9E-43 350.9 18.9 256 623-933 14-280 (370)
33 KOG4721 Serine/threonine prote 100.0 5.6E-40 1.2E-44 347.6 8.8 245 631-936 129-373 (904)
34 KOG0663 Protein kinase PITSLRE 100.0 5.8E-39 1.3E-43 321.2 14.1 275 625-926 75-360 (419)
35 KOG0605 NDR and related serine 100.0 1.1E-38 2.4E-43 339.8 16.3 249 622-920 137-435 (550)
36 KOG0616 cAMP-dependent protein 100.0 6.5E-39 1.4E-43 316.3 13.2 199 625-846 43-244 (355)
37 KOG0196 Tyrosine kinase, EPH ( 100.0 6.9E-40 1.5E-44 360.0 6.2 256 628-932 631-892 (996)
38 KOG1095 Protein tyrosine kinas 100.0 9.5E-39 2.1E-43 373.1 16.0 269 627-938 693-968 (1025)
39 KOG0588 Serine/threonine prote 100.0 9.7E-39 2.1E-43 346.2 14.8 249 625-927 11-263 (786)
40 PHA02988 hypothetical protein; 100.0 1.1E-37 2.3E-42 337.1 22.9 252 631-933 25-281 (283)
41 KOG1989 ARK protein kinase fam 100.0 1.9E-38 4.1E-43 359.5 17.0 265 626-934 37-314 (738)
42 KOG0658 Glycogen synthase kina 100.0 7E-39 1.5E-43 327.6 11.4 286 627-933 25-314 (364)
43 KOG3653 Transforming growth fa 100.0 3.7E-38 8.1E-43 329.7 16.7 281 627-937 211-509 (534)
44 cd05096 PTKc_DDR1 Catalytic do 100.0 2.1E-37 4.5E-42 339.4 21.7 272 626-930 5-304 (304)
45 cd07859 STKc_TDY_MAPK_plant Ca 100.0 6.5E-38 1.4E-42 349.2 17.9 285 627-927 1-290 (338)
46 cd05106 PTKc_CSF-1R Catalytic 100.0 1.2E-37 2.6E-42 349.8 19.5 268 626-932 38-373 (374)
47 KOG2052 Activin A type IB rece 100.0 2.1E-37 4.6E-42 321.6 19.6 271 626-934 211-506 (513)
48 cd05104 PTKc_Kit Catalytic dom 100.0 2.5E-37 5.5E-42 347.5 21.1 266 626-930 35-373 (375)
49 cd06649 PKc_MEK2 Catalytic dom 100.0 3.7E-37 8.1E-42 341.1 22.0 200 625-845 4-204 (331)
50 cd05631 STKc_GRK4 Catalytic do 100.0 2.7E-37 5.8E-42 334.9 20.2 252 627-926 1-260 (285)
51 cd07848 STKc_CDKL5 Catalytic d 100.0 3.5E-37 7.6E-42 334.8 19.1 280 626-926 1-283 (287)
52 KOG0194 Protein tyrosine kinas 100.0 8.9E-38 1.9E-42 342.1 14.4 261 626-936 157-425 (474)
53 KOG0694 Serine/threonine prote 100.0 1.9E-37 4.1E-42 339.7 16.8 244 624-921 366-613 (694)
54 cd05612 STKc_PRKX_like Catalyt 100.0 1.5E-37 3.1E-42 338.0 15.7 246 626-927 1-254 (291)
55 cd07869 STKc_PFTAIRE1 Catalyti 100.0 4.5E-37 9.8E-42 336.5 19.6 202 625-846 4-207 (303)
56 KOG0589 Serine/threonine prote 100.0 6.8E-38 1.5E-42 336.2 12.4 253 626-927 4-258 (426)
57 cd05064 PTKc_EphR_A10 Catalyti 100.0 5.2E-37 1.1E-41 329.3 19.1 256 626-931 5-265 (266)
58 cd05571 STKc_PKB Catalytic dom 100.0 3.1E-37 6.6E-42 340.5 17.3 242 632-926 1-250 (323)
59 cd07871 STKc_PCTAIRE3 Catalyti 100.0 5.9E-37 1.3E-41 332.8 19.1 277 625-926 4-284 (288)
60 KOG0580 Serine/threonine prote 100.0 8.5E-38 1.8E-42 299.7 10.8 251 624-927 20-273 (281)
61 cd05108 PTKc_EGFR Catalytic do 100.0 8.4E-37 1.8E-41 336.4 19.9 260 626-935 7-272 (316)
62 PTZ00263 protein kinase A cata 100.0 3E-37 6.4E-42 341.4 16.2 245 626-926 18-270 (329)
63 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 3.4E-37 7.4E-42 342.0 16.8 254 626-927 1-257 (333)
64 cd05048 PTKc_Ror Catalytic Dom 100.0 1.1E-36 2.4E-41 330.3 20.4 265 626-930 5-282 (283)
65 cd05093 PTKc_TrkB Catalytic do 100.0 1.2E-36 2.5E-41 330.7 20.6 269 626-934 5-282 (288)
66 cd07862 STKc_CDK6 Catalytic do 100.0 1.6E-36 3.4E-41 330.3 21.4 273 626-926 1-286 (290)
67 cd05062 PTKc_IGF-1R Catalytic 100.0 1E-36 2.2E-41 329.3 19.2 267 624-930 4-277 (277)
68 cd06650 PKc_MEK1 Catalytic dom 100.0 2.3E-36 5E-41 334.7 22.2 201 625-846 4-205 (333)
69 cd05105 PTKc_PDGFR_alpha Catal 100.0 1.5E-36 3.2E-41 341.9 20.2 269 625-932 36-398 (400)
70 cd05595 STKc_PKB_beta Catalyti 100.0 1E-36 2.2E-41 336.1 18.5 242 632-926 1-250 (323)
71 PTZ00267 NIMA-related protein 100.0 1.1E-36 2.3E-41 352.8 19.1 254 627-926 68-322 (478)
72 PHA03212 serine/threonine kina 100.0 1.4E-36 3E-41 342.1 19.5 271 626-926 92-375 (391)
73 cd08228 STKc_Nek6 Catalytic do 100.0 3.4E-36 7.4E-41 323.4 21.5 262 626-932 2-266 (267)
74 KOG0611 Predicted serine/threo 100.0 1.4E-37 3E-42 317.1 9.8 249 625-928 52-304 (668)
75 cd05585 STKc_YPK1_like Catalyt 100.0 7.3E-37 1.6E-41 335.9 16.2 239 634-925 1-245 (312)
76 PF07714 Pkinase_Tyr: Protein 100.0 6.7E-37 1.5E-41 326.7 15.5 250 631-928 4-259 (259)
77 PLN00034 mitogen-activated pro 100.0 1.9E-36 4.1E-41 338.6 19.6 249 626-927 74-328 (353)
78 cd05111 PTK_HER3 Pseudokinase 100.0 4E-36 8.7E-41 324.8 21.5 259 626-934 7-271 (279)
79 cd05593 STKc_PKB_gamma Catalyt 100.0 1.5E-36 3.3E-41 335.3 18.6 243 632-927 1-251 (328)
80 cd05094 PTKc_TrkC Catalytic do 100.0 2.9E-36 6.2E-41 328.1 20.4 269 626-934 5-285 (291)
81 cd05054 PTKc_VEGFR Catalytic d 100.0 2.6E-36 5.6E-41 334.5 20.3 270 626-933 7-335 (337)
82 PTZ00426 cAMP-dependent protei 100.0 8.7E-37 1.9E-41 338.1 16.4 247 625-927 29-284 (340)
83 cd05035 PTKc_Axl_like Catalyti 100.0 5.8E-36 1.3E-40 322.7 22.3 265 628-931 1-272 (273)
84 cd05033 PTKc_EphR Catalytic do 100.0 4.1E-36 8.8E-41 322.6 20.8 258 625-931 3-265 (266)
85 PTZ00283 serine/threonine prot 100.0 1.2E-36 2.5E-41 352.2 17.7 265 622-927 28-297 (496)
86 KOG0594 Protein kinase PCTAIRE 100.0 1.3E-36 2.9E-41 312.2 16.0 279 626-927 11-302 (323)
87 cd05114 PTKc_Tec_Rlk Catalytic 100.0 3.2E-36 7E-41 321.3 19.7 251 626-928 4-255 (256)
88 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 100.0 3.3E-36 7.1E-41 326.7 20.0 271 626-932 4-284 (284)
89 cd05080 PTKc_Tyk2_rpt2 Catalyt 100.0 4.3E-36 9.3E-41 325.5 20.8 271 627-932 4-282 (283)
90 cd05049 PTKc_Trk Catalytic dom 100.0 2.6E-36 5.7E-41 326.8 19.1 265 625-929 4-279 (280)
91 cd05052 PTKc_Abl Catalytic dom 100.0 3.9E-36 8.3E-41 322.1 20.0 256 626-931 6-262 (263)
92 cd05109 PTKc_HER2 Catalytic do 100.0 4.6E-36 1E-40 324.5 20.2 261 625-935 6-272 (279)
93 cd06646 STKc_MAP4K5 Catalytic 100.0 4.5E-36 9.8E-41 322.4 19.9 254 626-927 9-265 (267)
94 KOG0033 Ca2+/calmodulin-depend 100.0 2.4E-38 5.2E-43 303.0 1.9 252 625-926 10-266 (355)
95 cd05626 STKc_LATS2 Catalytic d 100.0 2E-36 4.4E-41 341.7 17.9 202 626-845 1-250 (381)
96 KOG0599 Phosphorylase kinase g 100.0 5.1E-37 1.1E-41 298.2 11.0 253 624-926 15-282 (411)
97 cd05075 PTKc_Axl Catalytic dom 100.0 6.8E-36 1.5E-40 322.0 21.0 265 628-931 1-271 (272)
98 cd05148 PTKc_Srm_Brk Catalytic 100.0 2.1E-36 4.5E-41 323.9 16.8 258 623-931 3-261 (261)
99 cd05045 PTKc_RET Catalytic dom 100.0 7.1E-36 1.5E-40 325.0 21.1 267 627-933 1-288 (290)
100 cd05084 PTKc_Fes Catalytic dom 100.0 5.9E-36 1.3E-40 318.5 19.7 249 632-929 1-251 (252)
101 cd05599 STKc_NDR_like Catalyti 100.0 1.5E-36 3.3E-41 341.4 15.8 202 626-845 1-241 (364)
102 cd05605 STKc_GRK4_like Catalyt 100.0 7.4E-36 1.6E-40 323.7 20.2 253 627-927 1-261 (285)
103 cd05628 STKc_NDR1 Catalytic do 100.0 3.6E-36 7.8E-41 337.6 18.4 202 626-845 1-238 (363)
104 PRK13184 pknD serine/threonine 100.0 5.7E-36 1.2E-40 353.4 20.8 271 626-934 2-293 (932)
105 cd05036 PTKc_ALK_LTK Catalytic 100.0 5E-36 1.1E-40 323.8 18.8 263 624-929 4-276 (277)
106 cd05072 PTKc_Lyn Catalytic dom 100.0 4.7E-36 1E-40 321.1 18.3 256 625-931 5-261 (261)
107 KOG4257 Focal adhesion tyrosin 100.0 1.5E-36 3.3E-41 324.8 14.4 254 629-933 392-651 (974)
108 KOG1094 Discoidin domain recep 100.0 1.5E-36 3.3E-41 323.3 14.1 264 626-931 538-804 (807)
109 KOG0444 Cytoskeletal regulator 100.0 8.6E-39 1.9E-43 341.5 -3.2 368 86-500 4-375 (1255)
110 cd05589 STKc_PKN Catalytic dom 100.0 4.6E-36 1E-40 331.4 18.3 245 628-926 1-256 (324)
111 cd05594 STKc_PKB_alpha Catalyt 100.0 2.1E-36 4.6E-41 334.3 15.6 243 632-926 1-251 (325)
112 cd05573 STKc_ROCK_NDR_like Cat 100.0 1.4E-36 3.1E-41 340.0 14.2 252 626-927 1-285 (350)
113 cd05596 STKc_ROCK Catalytic do 100.0 2.5E-36 5.5E-41 338.8 15.7 256 623-927 40-304 (370)
114 cd05587 STKc_cPKC Catalytic do 100.0 5.8E-36 1.3E-40 330.7 18.3 242 627-921 1-246 (324)
115 cd05061 PTKc_InsR Catalytic do 100.0 8.3E-36 1.8E-40 324.0 19.2 268 624-931 4-278 (288)
116 cd05032 PTKc_InsR_like Catalyt 100.0 7.2E-36 1.6E-40 322.8 18.6 265 625-929 5-276 (277)
117 cd05053 PTKc_FGFR Catalytic do 100.0 7.3E-36 1.6E-40 325.5 18.7 270 623-932 9-292 (293)
118 cd05090 PTKc_Ror1 Catalytic do 100.0 1E-35 2.3E-40 322.5 19.7 265 626-930 5-282 (283)
119 cd05629 STKc_NDR_like_fungal C 100.0 3.2E-36 7E-41 340.0 16.2 202 626-845 1-250 (377)
120 cd05590 STKc_nPKC_eta Catalyti 100.0 5.6E-36 1.2E-40 329.8 17.6 237 632-921 1-241 (320)
121 cd05092 PTKc_TrkA Catalytic do 100.0 9.9E-36 2.1E-40 322.0 19.2 264 626-929 5-279 (280)
122 cd05068 PTKc_Frk_like Catalyti 100.0 1.8E-35 3.8E-40 316.7 20.8 255 625-930 5-260 (261)
123 cd05592 STKc_nPKC_theta_delta 100.0 8.3E-36 1.8E-40 327.9 18.6 241 632-925 1-246 (316)
124 cd06654 STKc_PAK1 Catalytic do 100.0 1.4E-35 3.1E-40 323.2 20.3 250 626-926 20-269 (296)
125 cd05089 PTKc_Tie1 Catalytic do 100.0 1.6E-35 3.5E-40 323.2 20.8 270 626-938 2-282 (297)
126 cd05588 STKc_aPKC Catalytic do 100.0 8.1E-36 1.8E-40 329.9 18.6 194 632-845 1-198 (329)
127 cd05621 STKc_ROCK2 Catalytic d 100.0 4.8E-36 1E-40 336.0 16.9 206 620-845 37-249 (370)
128 cd07863 STKc_CDK4 Catalytic do 100.0 1.4E-35 3.1E-40 322.3 20.2 273 627-926 1-284 (288)
129 cd05584 STKc_p70S6K Catalytic 100.0 8.5E-36 1.8E-40 329.0 18.6 242 632-926 2-255 (323)
130 KOG4279 Serine/threonine prote 100.0 1.2E-36 2.7E-41 328.5 11.6 245 633-926 582-831 (1226)
131 cd08224 STKc_Nek6_Nek7 Catalyt 100.0 3.2E-35 7E-40 315.8 22.7 261 626-932 2-266 (267)
132 cd05618 STKc_aPKC_iota Catalyt 100.0 7.4E-36 1.6E-40 330.0 18.0 194 632-845 1-198 (329)
133 cd05591 STKc_nPKC_epsilon Cata 100.0 6.4E-36 1.4E-40 329.8 17.4 242 632-926 1-253 (321)
134 KOG0444 Cytoskeletal regulator 100.0 1.2E-38 2.7E-43 340.4 -4.1 362 66-451 8-374 (1255)
135 KOG0574 STE20-like serine/thre 100.0 4.7E-38 1E-42 308.9 0.3 248 628-926 35-282 (502)
136 cd05043 PTK_Ryk Pseudokinase d 100.0 1.2E-35 2.7E-40 321.4 19.1 270 624-934 4-279 (280)
137 cd05601 STKc_CRIK Catalytic do 100.0 2.2E-36 4.8E-41 335.2 13.3 252 626-926 1-262 (330)
138 cd08229 STKc_Nek7 Catalytic do 100.0 1.6E-35 3.4E-40 318.2 19.6 262 626-932 2-266 (267)
139 cd05113 PTKc_Btk_Bmx Catalytic 100.0 1.3E-35 2.7E-40 316.6 18.5 252 626-929 4-256 (256)
140 cd07872 STKc_PCTAIRE2 Catalyti 100.0 1.4E-35 3.1E-40 325.6 19.4 278 626-926 6-285 (309)
141 cd05107 PTKc_PDGFR_beta Cataly 100.0 1.9E-35 4E-40 332.7 20.6 269 625-932 36-400 (401)
142 cd05598 STKc_LATS Catalytic do 100.0 3.2E-36 6.8E-41 340.1 14.4 203 626-846 1-247 (376)
143 cd05619 STKc_nPKC_theta Cataly 100.0 1.2E-35 2.7E-40 326.3 18.6 241 632-925 1-246 (316)
144 cd05091 PTKc_Ror2 Catalytic do 100.0 9.5E-36 2.1E-40 322.8 17.4 265 626-930 5-282 (283)
145 cd05625 STKc_LATS1 Catalytic d 100.0 5.4E-36 1.2E-40 338.8 16.1 202 626-845 1-250 (382)
146 KOG0610 Putative serine/threon 100.0 9E-36 1.9E-40 307.5 16.0 254 626-926 77-391 (459)
147 cd05616 STKc_cPKC_beta Catalyt 100.0 1.1E-35 2.4E-40 328.3 18.0 242 627-921 1-246 (323)
148 cd05095 PTKc_DDR2 Catalytic do 100.0 2E-35 4.3E-40 322.4 19.8 272 626-930 5-296 (296)
149 cd05608 STKc_GRK1 Catalytic do 100.0 1.5E-35 3.2E-40 320.4 18.6 248 634-926 1-256 (280)
150 cd05055 PTKc_PDGFR Catalytic d 100.0 2.5E-35 5.3E-40 322.2 20.4 259 626-931 35-301 (302)
151 cd05063 PTKc_EphR_A2 Catalytic 100.0 2.4E-35 5.3E-40 316.9 19.8 258 625-931 4-267 (268)
152 cd05051 PTKc_DDR Catalytic dom 100.0 3.2E-35 7E-40 321.0 20.9 272 625-929 4-295 (296)
153 cd05570 STKc_PKC Catalytic dom 100.0 1.3E-35 2.9E-40 326.7 18.0 242 632-926 1-251 (318)
154 cd08529 STKc_FA2-like Catalyti 100.0 2.7E-35 5.9E-40 314.2 19.9 251 627-927 1-253 (256)
155 cd05620 STKc_nPKC_delta Cataly 100.0 1.4E-35 2.9E-40 326.1 18.0 241 632-925 1-246 (316)
156 cd07878 STKc_p38beta_MAPK11 Ca 100.0 1.8E-35 4E-40 329.7 19.1 283 622-927 11-298 (343)
157 cd07853 STKc_NLK Catalytic dom 100.0 1.1E-35 2.4E-40 334.9 17.5 282 627-927 1-288 (372)
158 cd06645 STKc_MAP4K3 Catalytic 100.0 1.6E-35 3.4E-40 318.2 17.8 253 626-926 9-264 (267)
159 cd05101 PTKc_FGFR2 Catalytic d 100.0 4.1E-35 9E-40 321.2 21.2 271 624-934 13-299 (304)
160 cd05071 PTKc_Src Catalytic dom 100.0 4.6E-35 1E-39 313.4 21.1 254 626-931 6-260 (262)
161 cd05103 PTKc_VEGFR2 Catalytic 100.0 3.5E-35 7.5E-40 326.9 20.8 271 625-933 6-341 (343)
162 PTZ00036 glycogen synthase kin 100.0 1.4E-35 3E-40 339.4 18.0 285 625-932 65-358 (440)
163 cd05088 PTKc_Tie2 Catalytic do 100.0 2.7E-35 5.9E-40 322.1 19.6 271 625-938 6-287 (303)
164 cd05097 PTKc_DDR_like Catalyti 100.0 4.4E-35 9.5E-40 319.5 21.1 271 626-929 5-294 (295)
165 cd05079 PTKc_Jak1_rpt2 Catalyt 100.0 3.6E-35 7.8E-40 318.4 20.2 272 627-931 5-283 (284)
166 cd07876 STKc_JNK2 Catalytic do 100.0 2.9E-35 6.2E-40 330.1 20.1 204 624-846 19-225 (359)
167 cd05614 STKc_MSK2_N N-terminal 100.0 1.2E-35 2.7E-40 329.5 16.9 252 627-926 1-266 (332)
168 cd06625 STKc_MEKK3_like Cataly 100.0 5.6E-35 1.2E-39 313.2 21.4 253 626-927 2-260 (263)
169 cd05622 STKc_ROCK1 Catalytic d 100.0 1.4E-35 3E-40 332.7 17.3 208 618-845 35-249 (371)
170 cd06637 STKc_TNIK Catalytic do 100.0 2.6E-35 5.6E-40 317.5 18.7 259 623-926 3-268 (272)
171 cd05115 PTKc_Zap-70 Catalytic 100.0 4.6E-35 9.9E-40 312.4 20.4 249 633-931 2-255 (257)
172 KOG4278 Protein tyrosine kinas 100.0 3.8E-36 8.2E-41 320.9 11.9 256 627-932 268-524 (1157)
173 cd05607 STKc_GRK7 Catalytic do 100.0 3.4E-35 7.5E-40 317.0 19.6 247 634-927 1-250 (277)
174 cd05099 PTKc_FGFR4 Catalytic d 100.0 4E-35 8.7E-40 322.7 20.5 273 625-937 11-299 (314)
175 cd05065 PTKc_EphR_B Catalytic 100.0 2.4E-35 5.2E-40 317.1 18.3 257 626-931 4-268 (269)
176 cd05575 STKc_SGK Catalytic dom 100.0 9.8E-36 2.1E-40 328.7 15.7 238 632-922 1-242 (323)
177 cd05070 PTKc_Fyn_Yrk Catalytic 100.0 6E-35 1.3E-39 312.3 21.1 253 626-930 6-259 (260)
178 cd05060 PTKc_Syk_like Catalyti 100.0 3.9E-35 8.5E-40 313.2 19.6 250 632-932 1-256 (257)
179 cd05116 PTKc_Syk Catalytic dom 100.0 5E-35 1.1E-39 312.3 20.4 247 633-930 2-254 (257)
180 PTZ00284 protein kinase; Provi 100.0 2.5E-35 5.5E-40 341.5 19.5 204 620-846 123-348 (467)
181 cd05050 PTKc_Musk Catalytic do 100.0 3.4E-35 7.4E-40 319.3 19.4 266 625-930 4-288 (288)
182 cd07874 STKc_JNK3 Catalytic do 100.0 1.8E-35 3.9E-40 331.3 17.6 204 623-845 14-220 (355)
183 cd05059 PTKc_Tec_like Catalyti 100.0 3.9E-35 8.5E-40 313.0 19.4 251 626-928 4-255 (256)
184 cd08219 STKc_Nek3 Catalytic do 100.0 2.9E-35 6.3E-40 313.8 18.3 251 627-927 1-252 (255)
185 cd06619 PKc_MKK5 Catalytic dom 100.0 7.5E-35 1.6E-39 314.9 21.4 251 626-927 1-253 (279)
186 cd05066 PTKc_EphR_A Catalytic 100.0 4.7E-35 1E-39 314.4 19.6 257 626-931 4-266 (267)
187 PHA03211 serine/threonine kina 100.0 1.9E-35 4.1E-40 336.2 17.3 196 624-843 167-362 (461)
188 cd05038 PTKc_Jak_rpt2 Catalyti 100.0 5.2E-35 1.1E-39 317.3 20.1 271 626-932 4-284 (284)
189 cd06656 STKc_PAK3 Catalytic do 100.0 5.5E-35 1.2E-39 318.7 20.2 251 625-926 18-268 (297)
190 cd06615 PKc_MEK Catalytic doma 100.0 5.3E-35 1.2E-39 320.6 20.1 278 626-928 1-288 (308)
191 cd05604 STKc_SGK3 Catalytic do 100.0 9.8E-36 2.1E-40 329.0 14.4 244 632-928 1-248 (325)
192 cd05098 PTKc_FGFR1 Catalytic d 100.0 4.1E-35 8.9E-40 321.6 19.1 270 625-934 17-302 (307)
193 cd05602 STKc_SGK1 Catalytic do 100.0 1.4E-35 3E-40 327.8 15.4 242 632-926 1-246 (325)
194 cd05082 PTKc_Csk Catalytic dom 100.0 6E-35 1.3E-39 311.5 19.7 250 626-931 6-256 (256)
195 cd05582 STKc_RSK_N N-terminal 100.0 7.2E-36 1.6E-40 329.1 12.8 239 632-923 2-245 (318)
196 cd06638 STKc_myosinIIIA Cataly 100.0 3.8E-35 8.3E-40 318.7 18.3 268 618-927 10-283 (286)
197 cd05039 PTKc_Csk_like Catalyti 100.0 7.6E-35 1.6E-39 310.8 20.1 251 625-931 5-256 (256)
198 cd06639 STKc_myosinIIIB Cataly 100.0 5.1E-35 1.1E-39 318.5 19.1 269 616-926 12-286 (291)
199 cd07875 STKc_JNK1 Catalytic do 100.0 3.6E-35 7.8E-40 329.9 18.4 204 624-846 22-228 (364)
200 cd06655 STKc_PAK2 Catalytic do 100.0 5.9E-35 1.3E-39 318.2 19.5 250 626-926 19-268 (296)
201 cd06624 STKc_ASK Catalytic dom 100.0 8.4E-35 1.8E-39 312.7 20.4 256 622-926 4-264 (268)
202 PF00069 Pkinase: Protein kina 100.0 3.1E-35 6.7E-40 314.6 17.0 253 628-926 1-256 (260)
203 cd05617 STKc_aPKC_zeta Catalyt 100.0 4.2E-35 9.2E-40 323.9 18.4 194 632-845 1-198 (327)
204 cd05615 STKc_cPKC_alpha Cataly 100.0 3.7E-35 8.1E-40 323.7 17.7 242 627-921 1-246 (323)
205 cd05056 PTKc_FAK Catalytic dom 100.0 9.8E-35 2.1E-39 312.6 20.5 258 626-934 6-268 (270)
206 cd05100 PTKc_FGFR3 Catalytic d 100.0 9.2E-35 2E-39 322.7 20.7 270 626-935 12-297 (334)
207 cd05110 PTKc_HER4 Catalytic do 100.0 7.6E-35 1.7E-39 318.7 19.4 261 625-935 6-272 (303)
208 cd06643 STKc_SLK Catalytic dom 100.0 8.4E-35 1.8E-39 315.2 19.6 250 628-926 7-261 (282)
209 cd06613 STKc_MAP4K3_like Catal 100.0 1.2E-34 2.6E-39 310.5 20.3 254 626-926 3-259 (262)
210 cd05057 PTKc_EGFR_like Catalyt 100.0 1.2E-34 2.7E-39 313.4 20.4 258 626-934 7-271 (279)
211 cd05627 STKc_NDR2 Catalytic do 100.0 2E-35 4.3E-40 331.3 14.6 202 626-845 1-238 (360)
212 cd05603 STKc_SGK2 Catalytic do 100.0 2.9E-35 6.2E-40 324.8 15.5 238 632-922 1-242 (321)
213 cd05087 PTKc_Aatyk1_Aatyk3 Cat 100.0 1.3E-34 2.8E-39 311.4 20.1 257 632-929 1-268 (269)
214 cd05067 PTKc_Lck_Blk Catalytic 100.0 1.4E-34 3.1E-39 309.4 20.3 253 626-930 6-259 (260)
215 cd06644 STKc_STK10_LOK Catalyt 100.0 1.3E-34 2.9E-39 315.3 20.4 252 626-926 12-268 (292)
216 KOG0584 Serine/threonine prote 100.0 6.4E-36 1.4E-40 324.6 9.8 247 630-926 44-295 (632)
217 cd00192 PTKc Catalytic domain 100.0 1.3E-34 2.9E-39 309.9 19.9 257 632-929 1-262 (262)
218 cd06628 STKc_MAPKKK_Byr2_like 100.0 1.7E-34 3.8E-39 310.1 20.7 250 627-926 1-263 (267)
219 cd06612 STKc_MST1_2 Catalytic 100.0 1.3E-34 2.7E-39 309.1 19.5 250 626-926 3-252 (256)
220 cd05047 PTKc_Tie Catalytic dom 100.0 1.7E-34 3.6E-39 310.7 20.6 258 632-932 1-269 (270)
221 cd05069 PTKc_Yes Catalytic dom 100.0 2E-34 4.4E-39 308.2 21.1 253 626-930 6-259 (260)
222 cd05630 STKc_GRK6 Catalytic do 100.0 8.2E-35 1.8E-39 315.4 18.2 252 627-926 1-260 (285)
223 KOG0032 Ca2+/calmodulin-depend 100.0 1.4E-34 3.1E-39 316.9 20.0 251 625-926 34-292 (382)
224 cd05632 STKc_GRK5 Catalytic do 100.0 1.5E-34 3.3E-39 313.4 20.0 251 628-926 2-260 (285)
225 cd07847 STKc_CDKL1_4 Catalytic 100.0 1.9E-34 4.2E-39 313.1 20.9 271 626-926 1-282 (286)
226 cd05058 PTKc_Met_Ron Catalytic 100.0 1.7E-34 3.8E-39 309.2 20.2 254 632-933 1-261 (262)
227 PTZ00266 NIMA-related protein 100.0 4.4E-35 9.5E-40 347.0 16.8 261 622-926 9-294 (1021)
228 cd06611 STKc_SLK_like Catalyti 100.0 7.2E-35 1.6E-39 315.4 17.0 254 625-927 4-262 (280)
229 cd05077 PTK_Jak1_rpt1 Pseudoki 100.0 2.3E-34 5E-39 307.9 20.4 240 632-928 1-261 (262)
230 cd05034 PTKc_Src_like Catalyti 100.0 2.2E-34 4.7E-39 308.3 20.1 255 625-930 5-260 (261)
231 cd07849 STKc_ERK1_2_like Catal 100.0 1.1E-34 2.4E-39 322.4 18.3 289 625-932 4-299 (336)
232 cd07873 STKc_PCTAIRE1 Catalyti 100.0 1.1E-34 2.5E-39 317.2 18.2 285 625-934 5-295 (301)
233 cd06609 STKc_MST3_like Catalyt 100.0 2.5E-34 5.3E-39 310.2 20.5 249 626-926 1-250 (274)
234 cd07868 STKc_CDK8 Catalytic do 100.0 3.2E-34 6.9E-39 316.3 21.8 206 631-846 6-219 (317)
235 cd08221 STKc_Nek9 Catalytic do 100.0 3.4E-34 7.5E-39 305.7 21.4 251 627-927 1-253 (256)
236 cd08223 STKc_Nek4 Catalytic do 100.0 2.8E-34 6E-39 306.7 20.5 252 627-927 1-254 (257)
237 cd07870 STKc_PFTAIRE2 Catalyti 100.0 1.9E-34 4.1E-39 314.0 19.5 203 624-846 3-207 (291)
238 cd06620 PKc_MAPKK_Byr1_like Ca 100.0 9.8E-35 2.1E-39 315.0 17.2 263 625-928 4-267 (284)
239 cd05044 PTKc_c-ros Catalytic d 100.0 1.3E-34 2.8E-39 311.5 17.8 256 632-930 1-269 (269)
240 KOG4717 Serine/threonine prote 100.0 7E-35 1.5E-39 305.6 15.1 248 626-926 18-269 (864)
241 PHA03207 serine/threonine kina 100.0 1.2E-34 2.6E-39 328.2 18.4 197 626-846 92-290 (392)
242 KOG0667 Dual-specificity tyros 100.0 5.9E-35 1.3E-39 320.7 15.2 198 627-847 187-392 (586)
243 cd06640 STKc_MST4 Catalytic do 100.0 4.3E-34 9.2E-39 308.8 21.6 249 626-927 4-253 (277)
244 cd05076 PTK_Tyk2_rpt1 Pseudoki 100.0 1.5E-34 3.3E-39 311.4 18.0 240 633-929 2-274 (274)
245 cd07861 STKc_CDK1_euk Catalyti 100.0 2.4E-34 5.3E-39 312.2 19.8 276 627-926 1-281 (285)
246 cd05085 PTKc_Fer Catalytic dom 100.0 3.2E-34 7E-39 304.8 20.2 247 632-929 1-249 (250)
247 cd05078 PTK_Jak2_Jak3_rpt1 Pse 100.0 6E-35 1.3E-39 311.8 14.6 240 632-928 1-257 (258)
248 KOG0596 Dual specificity; seri 100.0 3.6E-35 7.8E-40 312.0 12.6 252 626-926 361-626 (677)
249 cd06636 STKc_MAP4K4_6 Catalyti 100.0 2.2E-34 4.8E-39 312.0 19.1 266 616-926 6-278 (282)
250 cd05597 STKc_DMPK_like Catalyt 100.0 1.7E-34 3.6E-39 319.7 18.5 202 626-845 1-210 (331)
251 cd05040 PTKc_Ack_like Catalyti 100.0 2.5E-34 5.4E-39 307.0 19.2 250 632-929 1-256 (257)
252 cd05041 PTKc_Fes_like Catalyti 100.0 3.7E-34 8.1E-39 304.5 20.5 248 632-929 1-250 (251)
253 cd05042 PTKc_Aatyk Catalytic d 100.0 2.6E-34 5.7E-39 309.0 19.4 257 632-929 1-268 (269)
254 PHA03209 serine/threonine kina 100.0 7.7E-35 1.7E-39 325.6 15.8 193 624-843 64-256 (357)
255 KOG0577 Serine/threonine prote 100.0 1.3E-35 2.9E-40 315.7 9.0 244 628-926 28-277 (948)
256 cd06651 STKc_MEKK3 Catalytic d 100.0 4.4E-34 9.6E-39 306.7 20.8 253 626-926 2-260 (266)
257 cd05074 PTKc_Tyro3 Catalytic d 100.0 3.3E-34 7.2E-39 309.0 19.7 265 628-931 1-272 (273)
258 cd06608 STKc_myosinIII_like Ca 100.0 2.9E-34 6.4E-39 309.7 19.0 262 623-926 3-271 (275)
259 cd08218 STKc_Nek1 Catalytic do 100.0 3.4E-34 7.3E-39 305.8 18.9 250 627-926 1-252 (256)
260 cd06629 STKc_MAPKKK_Bck1_like 100.0 4.5E-34 9.9E-39 307.8 20.0 255 627-926 2-268 (272)
261 cd06642 STKc_STK25-YSK1 Cataly 100.0 1.9E-34 4.2E-39 311.5 17.1 248 627-927 5-253 (277)
262 cd07839 STKc_CDK5 Catalytic do 100.0 1.7E-34 3.7E-39 313.2 16.7 271 627-926 1-280 (284)
263 cd07844 STKc_PCTAIRE_like Cata 100.0 3.5E-34 7.7E-39 311.9 19.2 202 625-846 4-207 (291)
264 cd06621 PKc_MAPKK_Pek1_like Ca 100.0 8.7E-34 1.9E-38 308.0 22.1 264 626-926 1-265 (287)
265 cd07846 STKc_CDKL2_3 Catalytic 100.0 1.3E-34 2.9E-39 314.5 15.7 271 626-926 1-282 (286)
266 cd05112 PTKc_Itk Catalytic dom 100.0 4.5E-34 9.8E-39 304.8 19.2 252 625-928 3-255 (256)
267 cd06631 STKc_YSK4 Catalytic do 100.0 6.4E-34 1.4E-38 305.4 20.3 251 627-926 1-261 (265)
268 KOG0199 ACK and related non-re 100.0 7.6E-35 1.6E-39 315.8 13.0 250 630-928 114-369 (1039)
269 cd06622 PKc_MAPKK_PBS2_like Ca 100.0 4.2E-34 9.2E-39 310.4 18.9 254 626-926 1-261 (286)
270 cd08227 PK_STRAD_alpha Pseudok 100.0 4.3E-34 9.3E-39 316.3 19.1 201 630-846 2-213 (327)
271 cd05624 STKc_MRCK_beta Catalyt 100.0 2.1E-34 4.5E-39 318.9 16.6 202 626-845 1-210 (331)
272 cd05073 PTKc_Hck Catalytic dom 100.0 6.9E-34 1.5E-38 304.1 20.1 254 625-930 5-259 (260)
273 cd06652 STKc_MEKK2 Catalytic d 100.0 8.2E-34 1.8E-38 304.5 20.5 253 626-926 2-260 (265)
274 cd05083 PTKc_Chk Catalytic dom 100.0 4.5E-34 9.8E-39 304.4 18.2 247 626-930 6-253 (254)
275 cd05086 PTKc_Aatyk2 Catalytic 100.0 1.1E-33 2.3E-38 304.0 21.1 256 632-929 1-267 (268)
276 cd05046 PTK_CCK4 Pseudokinase 100.0 5.4E-34 1.2E-38 307.8 18.8 263 626-929 5-274 (275)
277 cd06617 PKc_MKK3_6 Catalytic d 100.0 7.3E-34 1.6E-38 308.1 19.9 254 626-926 1-260 (283)
278 cd05037 PTK_Jak_rpt1 Pseudokin 100.0 9E-34 1.9E-38 303.1 20.2 239 632-929 1-259 (259)
279 cd06647 STKc_PAK_I Catalytic d 100.0 7.9E-34 1.7E-38 309.0 20.1 252 625-927 18-269 (293)
280 cd05623 STKc_MRCK_alpha Cataly 100.0 3.5E-34 7.5E-39 317.5 17.5 202 626-845 1-210 (332)
281 cd06658 STKc_PAK5 Catalytic do 100.0 2.4E-34 5.3E-39 312.7 15.9 249 628-927 24-272 (292)
282 cd08217 STKc_Nek2 Catalytic do 100.0 8.9E-34 1.9E-38 304.1 20.1 257 627-926 1-261 (265)
283 cd05586 STKc_Sck1_like Catalyt 100.0 9.9E-35 2.1E-39 321.8 13.0 192 634-845 1-199 (330)
284 cd08528 STKc_Nek10 Catalytic d 100.0 7E-34 1.5E-38 305.8 19.2 256 627-929 1-268 (269)
285 cd08220 STKc_Nek8 Catalytic do 100.0 9.4E-34 2E-38 302.4 20.0 249 627-926 1-252 (256)
286 cd07867 STKc_CDC2L6 Catalytic 100.0 8.4E-34 1.8E-38 313.0 20.2 206 631-846 6-219 (317)
287 cd06632 STKc_MEKK1_plant Catal 100.0 1E-33 2.2E-38 302.4 20.2 248 627-926 1-254 (258)
288 cd06605 PKc_MAPKK Catalytic do 100.0 3.2E-34 6.9E-39 307.7 16.4 254 626-926 1-256 (265)
289 smart00219 TyrKc Tyrosine kina 100.0 1E-33 2.2E-38 302.3 20.1 252 628-928 1-258 (258)
290 cd07858 STKc_TEY_MAPK_plant Ca 100.0 4.9E-34 1.1E-38 317.1 18.1 290 625-934 4-300 (337)
291 cd05609 STKc_MAST Catalytic do 100.0 7.1E-34 1.5E-38 311.5 19.0 257 626-930 1-273 (305)
292 cd06659 STKc_PAK6 Catalytic do 100.0 3.8E-34 8.3E-39 312.0 16.7 248 629-927 24-271 (297)
293 cd06623 PKc_MAPKK_plant_like C 100.0 1.2E-33 2.6E-38 303.0 20.2 253 626-927 1-256 (264)
294 KOG0579 Ste20-like serine/thre 100.0 2.3E-35 5E-40 315.5 6.5 251 627-926 33-288 (1187)
295 cd07832 STKc_CCRK Catalytic do 100.0 1.4E-33 3E-38 306.5 20.5 274 627-926 1-281 (286)
296 cd07841 STKc_CDK7 Catalytic do 100.0 1.4E-33 3.1E-38 308.2 20.7 274 627-926 1-281 (298)
297 cd06626 STKc_MEKK4 Catalytic d 100.0 1.8E-33 4E-38 301.6 21.1 253 627-926 1-260 (264)
298 cd06610 STKc_OSR1_SPAK Catalyt 100.0 1.7E-33 3.8E-38 302.3 20.5 259 626-926 1-263 (267)
299 cd07833 STKc_CDKL Catalytic do 100.0 9.4E-34 2E-38 308.1 17.7 278 626-926 1-284 (288)
300 cd07860 STKc_CDK2_3 Catalytic 100.0 1.2E-33 2.6E-38 306.6 18.5 275 627-926 1-280 (284)
301 cd06648 STKc_PAK_II Catalytic 100.0 1.8E-33 3.9E-38 304.9 19.8 249 627-926 20-268 (285)
302 cd07855 STKc_ERK5 Catalytic do 100.0 1.1E-33 2.3E-38 314.1 18.3 284 625-926 4-293 (334)
303 cd06630 STKc_MEKK1 Catalytic d 100.0 1.9E-33 4.1E-38 302.3 19.3 254 627-926 1-263 (268)
304 cd05580 STKc_PKA Catalytic dom 100.0 1.4E-33 3.1E-38 306.8 18.0 244 626-925 1-252 (290)
305 cd06641 STKc_MST3 Catalytic do 100.0 3.9E-33 8.5E-38 301.2 21.3 248 627-927 5-253 (277)
306 KOG4250 TANK binding protein k 100.0 4.5E-34 9.7E-39 314.0 13.7 286 628-933 15-312 (732)
307 cd06917 STKc_NAK1_like Catalyt 100.0 3.4E-33 7.4E-38 301.8 20.5 248 627-926 2-254 (277)
308 cd06607 STKc_TAO Catalytic dom 100.0 5.1E-33 1.1E-37 305.0 21.4 248 625-927 14-267 (307)
309 KOG0986 G protein-coupled rece 100.0 2.7E-34 5.8E-39 298.2 10.5 248 626-921 185-435 (591)
310 cd07843 STKc_CDC2L1 Catalytic 100.0 2.2E-33 4.7E-38 306.0 18.2 203 625-845 4-209 (293)
311 KOG0604 MAP kinase-activated p 100.0 3.5E-34 7.5E-39 282.6 10.6 259 623-926 58-321 (400)
312 cd08225 STKc_Nek5 Catalytic do 100.0 1.8E-33 3.8E-38 300.4 16.9 250 627-926 1-253 (257)
313 KOG1025 Epidermal growth facto 100.0 2.3E-34 4.9E-39 317.4 10.2 256 629-934 699-960 (1177)
314 cd06614 STKc_PAK Catalytic dom 100.0 4.2E-33 9E-38 302.6 20.1 254 623-926 16-269 (286)
315 cd05574 STKc_phototropin_like 100.0 3.7E-33 8E-38 307.7 19.6 254 626-926 1-288 (316)
316 PHA02882 putative serine/threo 100.0 2.7E-33 5.8E-38 304.9 18.2 264 625-928 11-293 (294)
317 cd07850 STKc_JNK Catalytic dom 100.0 2.5E-33 5.3E-38 313.6 18.3 203 624-845 14-219 (353)
318 cd07879 STKc_p38delta_MAPK13 C 100.0 3.9E-33 8.4E-38 310.4 19.7 285 625-934 14-306 (342)
319 cd07842 STKc_CDK8_like Catalyt 100.0 3.8E-33 8.3E-38 307.7 19.3 208 627-846 1-219 (316)
320 cd07837 STKc_CdkB_plant Cataly 100.0 4.9E-33 1.1E-37 303.6 19.8 284 626-926 1-290 (295)
321 KOG0618 Serine/threonine phosp 100.0 3.3E-36 7.2E-41 337.8 -5.4 414 67-521 47-487 (1081)
322 PHA03390 pk1 serine/threonine- 100.0 8.7E-33 1.9E-37 296.4 21.2 251 618-926 6-261 (267)
323 cd05578 STKc_Yank1 Catalytic d 100.0 1.4E-33 3.1E-38 301.4 15.0 248 627-925 1-253 (258)
324 cd05122 PKc_STE Catalytic doma 100.0 7.6E-33 1.7E-37 294.4 20.5 250 627-926 1-250 (253)
325 cd07865 STKc_CDK9 Catalytic do 100.0 7.6E-33 1.7E-37 304.4 21.0 210 624-846 10-227 (310)
326 cd07835 STKc_CDK1_like Catalyt 100.0 4.3E-33 9.2E-38 302.1 18.7 274 628-926 1-279 (283)
327 cd05633 STKc_GRK3 Catalytic do 100.0 6E-33 1.3E-37 299.8 19.7 243 633-927 1-255 (279)
328 cd07836 STKc_Pho85 Catalytic d 100.0 7.2E-33 1.6E-37 300.5 20.3 276 627-926 1-280 (284)
329 cd07834 STKc_MAPK Catalytic do 100.0 4.4E-33 9.6E-38 309.1 18.9 290 627-934 1-298 (330)
330 cd06606 STKc_MAPKKK Catalytic 100.0 1.1E-32 2.4E-37 294.5 21.2 254 627-926 1-256 (260)
331 KOG1035 eIF-2alpha kinase GCN2 100.0 5.4E-34 1.2E-38 328.7 11.8 258 625-926 478-870 (1351)
332 cd07831 STKc_MOK Catalytic dom 100.0 7.3E-33 1.6E-37 300.1 19.9 272 628-926 1-278 (282)
333 cd07852 STKc_MAPK15 Catalytic 100.0 3.2E-33 7E-38 310.8 17.5 282 624-927 5-295 (337)
334 cd06616 PKc_MKK4 Catalytic dom 100.0 2.7E-33 5.8E-38 304.5 16.3 258 627-927 5-267 (288)
335 cd07840 STKc_CDK9_like Catalyt 100.0 1E-32 2.2E-37 299.8 20.7 276 628-926 1-283 (287)
336 cd07845 STKc_CDK10 Catalytic d 100.0 7.7E-33 1.7E-37 304.0 19.8 280 625-926 6-289 (309)
337 KOG4645 MAPKKK (MAP kinase kin 100.0 1.5E-34 3.2E-39 334.8 6.2 255 623-926 1232-1493(1509)
338 KOG0983 Mitogen-activated prot 100.0 1.1E-33 2.5E-38 275.3 11.5 251 627-926 93-348 (391)
339 cd07856 STKc_Sty1_Hog1 Catalyt 100.0 5.1E-33 1.1E-37 307.2 17.8 282 620-927 4-288 (328)
340 cd06657 STKc_PAK4 Catalytic do 100.0 6.5E-33 1.4E-37 301.4 18.0 244 632-926 26-269 (292)
341 cd07880 STKc_p38gamma_MAPK12 C 100.0 9.8E-33 2.1E-37 307.2 19.7 292 621-934 10-307 (343)
342 cd06635 STKc_TAO1 Catalytic do 100.0 1.6E-32 3.6E-37 302.2 21.3 247 628-929 27-279 (317)
343 cd06653 STKc_MEKK3_like_1 Cata 100.0 2.2E-32 4.8E-37 293.2 20.6 253 626-926 2-260 (264)
344 cd08215 STKc_Nek Catalytic dom 100.0 1.8E-32 4E-37 292.6 19.5 252 627-926 1-254 (258)
345 cd07838 STKc_CDK4_6_like Catal 100.0 3.8E-32 8.2E-37 295.3 22.2 278 628-926 1-283 (287)
346 KOG0586 Serine/threonine prote 100.0 5.1E-33 1.1E-37 301.9 15.2 251 623-927 53-306 (596)
347 cd05118 STKc_CMGC Catalytic do 100.0 2.2E-32 4.8E-37 296.5 20.3 274 628-926 1-279 (283)
348 cd08226 PK_STRAD_beta Pseudoki 100.0 1.7E-32 3.8E-37 303.6 19.7 286 632-933 4-316 (328)
349 cd07864 STKc_CDK12 Catalytic d 100.0 1.6E-32 3.5E-37 300.6 19.2 284 623-926 4-298 (302)
350 KOG0666 Cyclin C-dependent kin 100.0 1.2E-33 2.6E-38 280.0 9.1 208 625-845 23-242 (438)
351 cd07877 STKc_p38alpha_MAPK14 C 100.0 1.5E-32 3.2E-37 306.0 19.1 285 618-927 9-300 (345)
352 cd05611 STKc_Rim15_like Cataly 100.0 1.3E-32 2.8E-37 294.3 17.8 244 632-928 2-249 (260)
353 cd07857 STKc_MPK1 Catalytic do 100.0 1.4E-32 3E-37 304.9 18.3 282 627-926 1-291 (332)
354 PLN00009 cyclin-dependent kina 100.0 2.1E-32 4.6E-37 298.3 19.1 277 626-926 2-283 (294)
355 cd06627 STKc_Cdc7_like Catalyt 100.0 2.8E-32 6.1E-37 290.5 19.7 248 627-926 1-250 (254)
356 cd05572 STKc_cGK_PKG Catalytic 100.0 2.9E-32 6.3E-37 292.0 19.8 243 634-926 1-251 (262)
357 cd07854 STKc_MAPK4_6 Catalytic 100.0 1E-32 2.2E-37 307.1 16.1 284 625-926 4-299 (342)
358 cd08530 STKc_CNK2-like Catalyt 100.0 1.6E-32 3.5E-37 292.8 17.0 250 627-926 1-252 (256)
359 cd05577 STKc_GRK Catalytic dom 100.0 2.3E-32 5E-37 295.2 17.9 245 634-926 1-253 (277)
360 cd08216 PK_STRAD Pseudokinase 100.0 5.2E-32 1.1E-36 298.2 20.8 270 638-926 12-294 (314)
361 cd07866 STKc_BUR1 Catalytic do 100.0 2.3E-32 5.1E-37 300.7 17.9 284 625-926 7-307 (311)
362 cd07851 STKc_p38 Catalytic dom 100.0 1.3E-32 2.8E-37 306.4 15.6 280 624-926 13-297 (343)
363 cd05606 STKc_beta_ARK Catalyti 100.0 6E-32 1.3E-36 291.9 20.3 242 633-926 1-254 (278)
364 cd06618 PKc_MKK7 Catalytic dom 100.0 3.8E-32 8.2E-37 296.5 18.6 254 625-927 14-273 (296)
365 cd07830 STKc_MAK_like Catalyti 100.0 4.3E-32 9.3E-37 294.2 18.8 272 628-926 1-279 (283)
366 cd05579 STKc_MAST_like Catalyt 100.0 2E-32 4.4E-37 293.6 15.7 247 634-929 1-256 (265)
367 KOG0607 MAP kinase-interacting 100.0 9.8E-33 2.1E-37 274.2 12.0 272 617-926 74-360 (463)
368 cd06634 STKc_TAO2 Catalytic do 100.0 5.4E-32 1.2E-36 296.8 19.2 248 627-929 16-269 (308)
369 PHA03210 serine/threonine kina 100.0 1.7E-32 3.7E-37 318.7 16.0 205 624-843 146-368 (501)
370 PTZ00024 cyclin-dependent prot 100.0 7.1E-32 1.5E-36 299.9 19.6 276 625-926 7-312 (335)
371 KOG0690 Serine/threonine prote 100.0 3.9E-33 8.4E-38 277.3 8.0 201 624-844 166-369 (516)
372 KOG0618 Serine/threonine phosp 100.0 8.3E-35 1.8E-39 326.7 -4.4 414 66-520 69-510 (1081)
373 cd05581 STKc_PDK1 Catalytic do 100.0 2.7E-32 5.9E-37 295.3 15.3 250 626-926 1-276 (280)
374 cd06633 STKc_TAO3 Catalytic do 100.0 1.7E-31 3.6E-36 293.6 21.5 245 628-927 23-273 (313)
375 cd08222 STKc_Nek11 Catalytic d 100.0 7.5E-32 1.6E-36 288.4 16.9 251 627-926 1-256 (260)
376 cd05583 STKc_MSK_N N-terminal 100.0 6.5E-32 1.4E-36 293.5 16.6 257 627-931 1-267 (288)
377 cd07829 STKc_CDK_like Catalyti 100.0 1.2E-31 2.6E-36 290.6 18.4 273 628-926 1-278 (282)
378 cd05613 STKc_MSK1_N N-terminal 100.0 1.8E-31 3.8E-36 290.5 18.9 252 627-926 1-267 (290)
379 KOG1151 Tousled-like protein k 100.0 5.4E-33 1.2E-37 286.4 6.3 259 626-926 463-740 (775)
380 KOG0200 Fibroblast/platelet-de 100.0 2.6E-31 5.6E-36 313.0 19.5 267 626-932 296-580 (609)
381 KOG1006 Mitogen-activated prot 100.0 9.5E-34 2.1E-38 275.0 -1.2 253 632-926 70-326 (361)
382 cd05610 STKc_MASTL Catalytic d 100.0 3.1E-31 6.6E-36 317.6 19.1 147 625-789 3-152 (669)
383 KOG4236 Serine/threonine prote 100.0 3.6E-32 7.9E-37 285.9 8.7 195 631-845 569-768 (888)
384 KOG0612 Rho-associated, coiled 100.0 2.4E-32 5.3E-37 312.5 7.8 207 619-844 68-282 (1317)
385 KOG0662 Cyclin-dependent kinas 100.0 2.1E-31 4.6E-36 243.4 12.3 199 627-845 3-205 (292)
386 KOG0669 Cyclin T-dependent kin 100.0 7.3E-33 1.6E-37 266.5 2.3 210 626-848 17-234 (376)
387 KOG0587 Traf2- and Nck-interac 100.0 4.3E-31 9.4E-36 295.8 16.8 267 616-926 9-281 (953)
388 cd05123 STKc_AGC Catalytic dom 100.0 9.3E-31 2E-35 278.2 17.9 237 634-923 1-240 (250)
389 KOG0603 Ribosomal protein S6 k 100.0 2.3E-31 5E-36 290.8 12.6 241 625-927 321-563 (612)
390 KOG1024 Receptor-like protein 100.0 2.1E-31 4.5E-36 271.5 11.2 276 619-935 277-559 (563)
391 KOG0671 LAMMER dual specificit 100.0 1.5E-31 3.2E-36 273.9 9.8 278 625-926 88-405 (415)
392 KOG0696 Serine/threonine prote 100.0 1.2E-31 2.6E-36 274.4 8.6 202 625-846 348-553 (683)
393 KOG0984 Mitogen-activated prot 100.0 2.1E-31 4.5E-36 249.5 9.4 210 625-851 45-260 (282)
394 cd05576 STKc_RPK118_like Catal 100.0 1.3E-30 2.8E-35 274.4 16.3 223 637-924 4-226 (237)
395 PLN03225 Serine/threonine-prot 100.0 6.3E-30 1.4E-34 298.2 20.0 280 624-926 130-449 (566)
396 KOG0664 Nemo-like MAPK-related 100.0 3.5E-32 7.6E-37 264.3 -0.7 203 628-845 55-260 (449)
397 KOG0668 Casein kinase II, alph 100.0 1.3E-30 2.9E-35 247.6 8.3 269 623-926 35-321 (338)
398 KOG1290 Serine/threonine prote 100.0 9.4E-30 2E-34 267.2 15.2 136 626-774 78-221 (590)
399 PLN03224 probable serine/threo 100.0 3.3E-29 7.1E-34 284.1 18.9 279 624-926 143-499 (507)
400 smart00220 S_TKc Serine/Threon 100.0 3.6E-29 7.7E-34 264.3 17.6 239 638-926 1-240 (244)
401 KOG0614 cGMP-dependent protein 100.0 8.4E-31 1.8E-35 275.2 4.9 201 625-846 419-622 (732)
402 KOG0695 Serine/threonine prote 100.0 2E-29 4.3E-34 251.6 12.4 202 625-846 249-454 (593)
403 KOG1027 Serine/threonine prote 100.0 3.9E-30 8.5E-35 286.8 8.1 243 631-925 514-765 (903)
404 KOG0608 Warts/lats-like serine 100.0 5.8E-29 1.3E-33 267.2 11.0 207 626-850 629-878 (1034)
405 KOG1152 Signal transduction se 99.9 1.3E-28 2.9E-33 262.8 8.7 200 623-844 558-770 (772)
406 KOG0665 Jun-N-terminal kinase 99.9 3.8E-28 8.2E-33 243.1 7.4 200 625-844 16-218 (369)
407 KOG1345 Serine/threonine kinas 99.9 1.1E-27 2.3E-32 233.6 9.6 255 626-929 24-286 (378)
408 KOG4237 Extracellular matrix p 99.9 4.2E-29 9.1E-34 255.9 -1.7 300 70-378 51-358 (498)
409 KOG0576 Mitogen-activated prot 99.9 3.7E-28 8.1E-33 263.8 4.7 254 625-926 14-270 (829)
410 KOG1167 Serine/threonine prote 99.9 2.4E-27 5.3E-32 246.7 10.1 282 621-926 31-380 (418)
411 cd00180 PKc Catalytic domain o 99.9 5.7E-26 1.2E-30 234.0 19.6 211 634-927 1-214 (215)
412 KOG0670 U4/U6-associated splic 99.9 3.8E-27 8.3E-32 248.5 6.7 202 624-846 430-638 (752)
413 smart00221 STYKc Protein kinas 99.9 1.6E-25 3.4E-30 233.6 18.0 200 628-845 1-202 (225)
414 KOG4237 Extracellular matrix p 99.9 9.4E-27 2E-31 238.7 -2.4 412 58-497 51-498 (498)
415 PLN03210 Resistant to P. syrin 99.9 1E-23 2.2E-28 267.1 23.3 337 83-498 552-904 (1153)
416 PRK15387 E3 ubiquitin-protein 99.9 5.5E-24 1.2E-28 249.2 16.9 265 161-507 201-465 (788)
417 PRK15387 E3 ubiquitin-protein 99.9 3.8E-24 8.2E-29 250.6 14.7 83 391-483 383-465 (788)
418 smart00750 KIND kinase non-cat 99.9 7.6E-24 1.6E-28 211.8 13.7 169 713-933 1-171 (176)
419 PLN03210 Resistant to P. syrin 99.9 3.5E-23 7.6E-28 262.2 22.5 315 153-521 580-904 (1153)
420 PLN00181 protein SPA1-RELATED; 99.9 3.6E-24 7.8E-29 263.6 11.1 201 679-926 28-264 (793)
421 PRK15370 E3 ubiquitin-protein 99.9 2.4E-23 5.3E-28 245.8 14.8 367 15-490 55-460 (754)
422 PRK09188 serine/threonine prot 99.9 2.2E-22 4.7E-27 218.9 16.2 168 623-818 15-195 (365)
423 KOG1165 Casein kinase (serine/ 99.9 8E-22 1.7E-26 198.3 17.5 265 627-938 29-306 (449)
424 KOG1164 Casein kinase (serine/ 99.9 1.3E-21 2.8E-26 214.6 20.0 274 627-944 19-310 (322)
425 KOG1163 Casein kinase (serine/ 99.9 2.4E-22 5.3E-27 193.1 11.1 265 625-934 14-287 (341)
426 KOG0195 Integrin-linked kinase 99.9 4.9E-23 1.1E-27 200.8 4.7 250 629-932 193-447 (448)
427 PRK15370 E3 ubiquitin-protein 99.9 9E-22 2E-26 232.6 12.5 255 55-403 170-428 (754)
428 KOG0590 Checkpoint kinase and 99.9 4.4E-22 9.4E-27 231.2 7.4 254 630-926 322-584 (601)
429 PRK10359 lipopolysaccharide co 99.8 5.8E-21 1.3E-25 192.5 8.6 175 625-837 30-216 (232)
430 COG0515 SPS1 Serine/threonine 99.8 2.1E-19 4.5E-24 199.8 19.3 260 628-927 2-275 (384)
431 cd05147 RIO1_euk RIO kinase fa 99.8 7.3E-20 1.6E-24 183.4 11.7 141 631-793 2-169 (190)
432 KOG1240 Protein kinase contain 99.8 3.3E-20 7.1E-25 212.9 7.4 250 627-930 24-294 (1431)
433 cd05145 RIO1_like RIO kinase f 99.8 7.4E-19 1.6E-23 177.1 15.0 141 631-794 2-170 (190)
434 PF14531 Kinase-like: Kinase-l 99.8 1.3E-19 2.7E-24 188.4 9.2 241 629-918 15-288 (288)
435 KOG4158 BRPK/PTEN-induced prot 99.8 2.9E-19 6.3E-24 183.7 11.0 203 681-929 274-512 (598)
436 KOG0617 Ras suppressor protein 99.8 8.1E-21 1.8E-25 173.2 -0.7 166 314-486 29-195 (264)
437 PRK12274 serine/threonine prot 99.8 1.7E-18 3.6E-23 170.4 13.8 186 629-845 5-209 (218)
438 KOG1166 Mitotic checkpoint ser 99.8 1.6E-18 3.6E-23 204.3 13.0 201 620-842 692-902 (974)
439 KOG0617 Ras suppressor protein 99.8 1.2E-20 2.6E-25 172.1 -4.9 157 338-500 29-186 (264)
440 KOG1023 Natriuretic peptide re 99.7 2.5E-18 5.4E-23 190.0 10.0 218 677-934 1-227 (484)
441 PRK10345 hypothetical protein; 99.7 1.6E-17 3.4E-22 167.8 13.5 140 628-788 4-156 (210)
442 cd00116 LRR_RI Leucine-rich re 99.7 4.4E-20 9.5E-25 203.8 -6.3 134 70-221 3-149 (319)
443 cd00116 LRR_RI Leucine-rich re 99.7 2.6E-20 5.7E-25 205.6 -9.3 156 66-221 24-205 (319)
444 smart00090 RIO RIO-like kinase 99.7 5E-17 1.1E-21 168.6 13.8 148 623-793 25-200 (237)
445 KOG0603 Ribosomal protein S6 k 99.7 2.7E-18 5.8E-23 188.8 2.4 187 633-845 1-193 (612)
446 KOG1033 eIF-2alpha kinase PEK/ 99.7 9.3E-18 2E-22 181.1 4.5 129 702-843 330-463 (516)
447 PLN03150 hypothetical protein; 99.7 2.7E-16 5.9E-21 186.1 11.1 152 17-172 366-526 (623)
448 cd05144 RIO2_C RIO kinase fami 99.7 8.9E-16 1.9E-20 156.2 13.1 146 619-793 8-177 (198)
449 PRK14879 serine/threonine prot 99.6 1.2E-15 2.6E-20 157.4 13.1 134 632-790 2-143 (211)
450 KOG0606 Microtubule-associated 99.6 1.3E-16 2.9E-21 183.7 6.1 168 624-846 81-261 (1205)
451 PRK09605 bifunctional UGMP fam 99.6 1.9E-15 4.2E-20 177.3 13.9 144 618-790 325-476 (535)
452 TIGR03724 arch_bud32 Kae1-asso 99.6 3E-15 6.5E-20 152.7 11.9 130 633-790 1-138 (199)
453 cd05119 RIO RIO kinase family, 99.5 2.8E-14 6.2E-19 144.0 11.9 137 631-793 2-166 (187)
454 KOG0590 Checkpoint kinase and 99.5 1.7E-15 3.8E-20 176.3 1.6 257 625-926 19-285 (601)
455 PRK01723 3-deoxy-D-manno-octul 99.5 1.1E-13 2.4E-18 144.0 14.2 141 631-792 36-193 (239)
456 cd05120 APH_ChoK_like Aminogly 99.5 1.2E-13 2.5E-18 134.2 13.2 135 630-790 2-138 (155)
457 KOG0532 Leucine-rich repeat (L 99.5 1.1E-15 2.3E-20 164.9 -3.0 179 316-505 73-251 (722)
458 KOG0532 Leucine-rich repeat (L 99.5 1.6E-15 3.5E-20 163.5 -1.6 194 323-527 55-251 (722)
459 PLN03150 hypothetical protein; 99.4 1.3E-13 2.8E-18 163.4 9.3 111 441-551 420-533 (623)
460 KOG1266 Protein kinase [Signal 99.4 1.9E-13 4.1E-18 138.3 7.1 160 674-841 118-280 (458)
461 COG4886 Leucine-rich repeat (L 99.4 2.5E-13 5.5E-18 154.3 5.9 202 298-509 97-299 (394)
462 COG4248 Uncharacterized protei 99.4 1.1E-11 2.4E-16 129.9 16.0 290 629-946 14-327 (637)
463 COG4886 Leucine-rich repeat (L 99.3 9.5E-13 2.1E-17 149.6 6.7 199 321-529 96-296 (394)
464 TIGR01982 UbiB 2-polyprenylphe 99.3 6.7E-12 1.5E-16 142.2 12.0 143 631-793 122-309 (437)
465 KOG0601 Cyclin-dependent kinas 99.2 1.7E-11 3.6E-16 136.0 6.9 198 627-843 115-327 (524)
466 cd05151 ChoK Choline Kinase (C 99.2 6.7E-11 1.4E-15 117.3 10.6 131 631-790 3-136 (170)
467 cd05146 RIO3_euk RIO kinase fa 99.2 2.6E-10 5.7E-15 112.9 14.4 139 631-793 2-176 (197)
468 PRK04750 ubiB putative ubiquin 99.2 5E-11 1.1E-15 136.2 10.1 150 626-794 120-317 (537)
469 KOG1243 Protein kinase [Genera 99.2 1.5E-10 3.2E-15 129.4 12.7 171 644-840 30-200 (690)
470 KOG1259 Nischarin, modulator o 99.1 5.6E-12 1.2E-16 125.8 -0.1 133 389-528 283-417 (490)
471 KOG0531 Protein phosphatase 1, 99.1 1.3E-11 2.8E-16 140.4 0.3 266 89-405 49-320 (414)
472 PF14580 LRR_9: Leucine-rich r 99.1 5E-11 1.1E-15 115.7 3.7 127 85-216 15-147 (175)
473 PF08263 LRRNT_2: Leucine rich 99.1 1E-10 2.2E-15 85.2 3.2 41 21-61 1-43 (43)
474 KOG1259 Nischarin, modulator o 99.1 4.7E-11 1E-15 119.4 1.8 131 366-503 284-415 (490)
475 KOG0531 Protein phosphatase 1, 99.1 2.2E-11 4.7E-16 138.5 -0.7 271 114-457 50-323 (414)
476 COG3642 Mn2+-dependent serine/ 99.0 1.6E-09 3.5E-14 102.8 11.5 131 632-790 2-140 (204)
477 KOG3207 Beta-tubulin folding c 99.0 3E-11 6.4E-16 127.4 -0.8 64 158-222 118-185 (505)
478 KOG0601 Cyclin-dependent kinas 99.0 2.2E-10 4.7E-15 127.3 4.7 249 624-931 263-518 (524)
479 KOG1909 Ran GTPase-activating 99.0 5.4E-12 1.2E-16 129.5 -7.4 259 83-378 24-310 (382)
480 KOG1909 Ran GTPase-activating 99.0 3.3E-12 7.2E-17 131.0 -9.6 256 154-451 23-310 (382)
481 cd05154 ACAD10_11_like Acyl-Co 99.0 5.6E-09 1.2E-13 108.5 13.9 145 632-790 4-206 (223)
482 KOG3741 Poly(A) ribonuclease s 99.0 1.1E-08 2.3E-13 110.9 15.7 181 638-841 288-474 (655)
483 PF14580 LRR_9: Leucine-rich r 99.0 1.2E-10 2.7E-15 112.9 0.9 109 109-222 15-126 (175)
484 KOG3207 Beta-tubulin folding c 99.0 1.1E-10 2.3E-15 123.3 0.3 216 86-308 118-340 (505)
485 PF01163 RIO1: RIO1 family; I 98.9 1.2E-08 2.5E-13 101.0 13.4 127 641-793 1-158 (188)
486 KOG0606 Microtubule-associated 98.9 4E-10 8.7E-15 131.2 1.6 207 623-847 801-1039(1205)
487 KOG3087 Serine/threonine prote 98.9 1.4E-08 2.9E-13 95.9 10.9 143 630-790 11-165 (229)
488 KOG4658 Apoptotic ATPase [Sign 98.9 2.1E-09 4.6E-14 130.2 5.8 126 89-217 523-650 (889)
489 PF13855 LRR_8: Leucine rich r 98.8 4.8E-09 1E-13 83.6 4.2 14 341-354 24-37 (61)
490 PF13855 LRR_8: Leucine rich r 98.8 5.8E-09 1.3E-13 83.1 4.5 61 342-402 1-61 (61)
491 KOG4658 Apoptotic ATPase [Sign 98.8 5.5E-09 1.2E-13 126.7 5.4 294 90-400 546-856 (889)
492 PRK15123 lipopolysaccharide co 98.7 1.8E-07 4E-12 98.4 15.0 147 631-790 27-194 (268)
493 COG0478 RIO-like serine/threon 98.7 1.2E-07 2.7E-12 95.7 11.7 137 627-791 92-252 (304)
494 KOG2137 Protein kinase [Signal 98.5 4.9E-08 1.1E-12 110.1 1.6 151 744-925 105-263 (700)
495 PF06293 Kdo: Lipopolysacchari 98.4 1.9E-06 4.1E-11 87.9 11.8 111 668-792 56-172 (206)
496 PRK09902 hypothetical protein; 98.4 4.3E-06 9.3E-11 83.1 13.1 156 621-790 13-179 (216)
497 COG1718 RIO1 Serine/threonine 98.4 5.8E-06 1.3E-10 83.0 13.9 155 616-794 35-219 (268)
498 PF06176 WaaY: Lipopolysacchar 98.4 3.2E-06 7E-11 84.1 11.8 142 625-790 30-183 (229)
499 KOG1859 Leucine-rich repeat pr 98.4 1.7E-08 3.7E-13 112.8 -4.8 185 178-379 102-292 (1096)
500 KOG4579 Leucine-rich repeat (L 98.4 1.6E-08 3.4E-13 90.2 -4.4 87 439-528 77-164 (177)
No 1
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=4.2e-108 Score=1036.45 Aligned_cols=856 Identities=31% Similarity=0.483 Sum_probs=586.1
Q ss_pred hcCCCChhhHHHHHHHHhccCCCCCCCccCccCCCCcceeeeeEEeCCCCcEEEEEcCCCCCCccccCCCCCCCCCceee
Q 039533 16 VAGTGNETDRVALLEFKSKSTYDPVGVLGTWNESIHFCKWYGVTCSRRHQRVTLLDLRSLKLAGSVSHFIGNLSFLKQLY 95 (949)
Q Consensus 16 ~~~~~~~~~~~aLl~~k~~~~~~~~~~l~sW~~~~~~C~w~gv~C~~~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~ 95 (949)
..+...++|+.||++||+++ .||.+.+.+|+.+.+||.|.||+|++ .++|+.|||++++++|.+++.+..+++|+.|+
T Consensus 22 ~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~w~~~~~~c~w~gv~c~~-~~~v~~L~L~~~~i~~~~~~~~~~l~~L~~L~ 99 (968)
T PLN00113 22 NFSMLHAEELELLLSFKSSI-NDPLKYLSNWNSSADVCLWQGITCNN-SSRVVSIDLSGKNISGKISSAIFRLPYIQTIN 99 (968)
T ss_pred HccCCCHHHHHHHHHHHHhC-CCCcccCCCCCCCCCCCcCcceecCC-CCcEEEEEecCCCccccCChHHhCCCCCCEEE
Confidence 45555789999999999987 47888899998888999999999986 46899999999999999998899999999999
Q ss_pred ccCceeccccCCccc-CcccCcEEeeccccccCcC----------------------CCCCCCCccceeecCCCcccccc
Q 039533 96 LQVNSFTHEIPSEIG-GLRRLKVLALNNNSICGEI----------------------PTNISRCSTLIPIHPQNNQLVGK 152 (949)
Q Consensus 96 L~~n~l~~~~p~~~~-~l~~L~~L~Ls~N~l~~~~----------------------p~~~~~l~~L~~L~l~~n~l~~~ 152 (949)
|++|+++|.+|..+. ++++|++|+|++|+++|.+ |..++++++|++|++++|.+.+.
T Consensus 100 Ls~n~~~~~ip~~~~~~l~~L~~L~Ls~n~l~~~~p~~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~ 179 (968)
T PLN00113 100 LSNNQLSGPIPDDIFTTSSSLRYLNLSNNNFTGSIPRGSIPNLETLDLSNNMLSGEIPNDIGSFSSLKVLDLGGNVLVGK 179 (968)
T ss_pred CCCCccCCcCChHHhccCCCCCEEECcCCccccccCccccCCCCEEECcCCcccccCChHHhcCCCCCEEECccCccccc
Confidence 999999888887654 6777777777766665544 44455555555555555555555
Q ss_pred ccccccCCCCCcEEECCCCCCCCCCCCCcCCCCCccEEeccccccCCCCCCcccCCCccccccccCcccccc-c------
Q 039533 153 ILSRFSSLSKTEILNLGSNHLTGSIPSSLGNLSSIHTISLAYNNLDGTIPNSFGWFENLVFLSLAANNLSVV-E------ 225 (949)
Q Consensus 153 ~~~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~-~------ 225 (949)
.|..|+++++|++|+|++|.+++.+|..++++++|++|+|++|++++.+|..|+++++|++|+|++|.++.. +
T Consensus 180 ~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l 259 (968)
T PLN00113 180 IPNSLTNLTSLEFLTLASNQLVGQIPRELGQMKSLKWIYLGYNNLSGEIPYEIGGLTSLNHLDLVYNNLTGPIPSSLGNL 259 (968)
T ss_pred CChhhhhCcCCCeeeccCCCCcCcCChHHcCcCCccEEECcCCccCCcCChhHhcCCCCCEEECcCceeccccChhHhCC
Confidence 555555555555555555555555555555555555555555555555555555555555555555554311 0
Q ss_pred ----------ccccCCCC-ChhhhccccccccccCCCCCCCCCCcchhccccccCcccEEEccCCCCCccCCchhhcccc
Q 039533 226 ----------NKLTGEVP-SLEKLQRLQHFTITSNSLGSGGNDDLSFLCSLTNATRLTWMHINSNNFGGLLPGCISNLSK 294 (949)
Q Consensus 226 ----------~~l~~~~~-~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~~~~L~~L~L~~N~l~~~~p~~~~~l~~ 294 (949)
+.+.+.+| .+..+++|++|++++|.+... .+..+.++++|+.|++++|.+++.+|..+..++
T Consensus 260 ~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~------~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~- 332 (968)
T PLN00113 260 KNLQYLFLYQNKLSGPIPPSIFSLQKLISLDLSDNSLSGE------IPELVIQLQNLEILHLFSNNFTGKIPVALTSLP- 332 (968)
T ss_pred CCCCEEECcCCeeeccCchhHhhccCcCEEECcCCeeccC------CChhHcCCCCCcEEECCCCccCCcCChhHhcCC-
Confidence 11222222 233344444444444443321 112233445555555555555555555555442
Q ss_pred cccEEEccCccccCCCCCCCCCCCcccEEEeecceecccCCCcccccCCCCEEecCCcccccccCcccccccccceeecc
Q 039533 295 TIKTLFLNNNKIYGSIPAGIGNFVNLQRLDMWNNQLSGTIPPAIGELQNLKILGLNRNKLSGNIPPSIGNLKMLLNLFLN 374 (949)
Q Consensus 295 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 374 (949)
+|+.|+|++|++++.+|..++.+++|+.|+|++|++++.+|..+..+++|+.|++++|++.+.+|..+.++++|+.|+++
T Consensus 333 ~L~~L~L~~n~l~~~~p~~l~~~~~L~~L~Ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~L~~L~L~ 412 (968)
T PLN00113 333 RLQVLQLWSNKFSGEIPKNLGKHNNLTVLDLSTNNLTGEIPEGLCSSGNLFKLILFSNSLEGEIPKSLGACRSLRRVRLQ 412 (968)
T ss_pred CCCEEECcCCCCcCcCChHHhCCCCCcEEECCCCeeEeeCChhHhCcCCCCEEECcCCEecccCCHHHhCCCCCCEEECc
Confidence 35555555555555555555555555555555555554444444444444444444444444444444444444444444
Q ss_pred cccccccCCCCCC------------------------CCCCCcEEEeeCccccCCCCCcccCCcccceeeccCCCccCCC
Q 039533 375 DNFLEVSIPSSLG------------------------QCESLIEINLSNNNLSGTIPPQFFSLSSLSISLDWSRNKLTGS 430 (949)
Q Consensus 375 ~N~l~~~~p~~~~------------------------~l~~L~~L~l~~N~l~~~~p~~~~~l~~l~~~L~ls~N~l~~~ 430 (949)
+|++++.+|..|. .+++|+.|++++|++.+.+|..+ ...+| +.|++++|++++.
T Consensus 413 ~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~-~~~~L-~~L~ls~n~l~~~ 490 (968)
T PLN00113 413 DNSFSGELPSEFTKLPLVYFLDISNNNLQGRINSRKWDMPSLQMLSLARNKFFGGLPDSF-GSKRL-ENLDLSRNQFSGA 490 (968)
T ss_pred CCEeeeECChhHhcCCCCCEEECcCCcccCccChhhccCCCCcEEECcCceeeeecCccc-ccccc-eEEECcCCccCCc
Confidence 4444444444444 44444444444444444444433 23445 6788888888888
Q ss_pred CccccccccccceeeeccccccccCCcccccccchhhcccCccccccccCCCcCCCCCCCEEECCCCcCCCcCcccccCC
Q 039533 431 LPIEVGKLKILEFLYVYENRLEGEIPSTFGNCIRLEQLGMGGNLFQGPISSSLGSLRGLRVLDLSQNNLSGEIPKFLAGL 510 (949)
Q Consensus 431 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~ 510 (949)
+|..+..+++|+.|+|++|++.+.+|..++++++|+.|+|++|.+++.+|..|..+++|+.|||++|+++|.+|..+..+
T Consensus 491 ~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l 570 (968)
T PLN00113 491 VPRKLGSLSELMQLKLSENKLSGEIPDELSSCKKLVSLDLSHNQLSGQIPASFSEMPVLSQLDLSQNQLSGEIPKNLGNV 570 (968)
T ss_pred cChhhhhhhccCEEECcCCcceeeCChHHcCccCCCEEECCCCcccccCChhHhCcccCCEEECCCCcccccCChhHhcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999888
Q ss_pred c-cceEeCCCCcCcCcccccccccccccccccCCCCCCCCCCCCCCCcccccCCcCcccccccceeeeehhHHHHHHHHH
Q 039533 511 S-LNNLNLSYNDLEGMVTTEGVFKNASATRILGNSKLCGGISEFKLPTCVSKKSKRRRLTFVPTLVIAIVFRLLGLALAL 589 (949)
Q Consensus 511 ~-L~~l~ls~N~l~~~~~~~~~~~~~~~~~~~gn~~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~i~~~~~~~l~~~~~~ 589 (949)
+ |+.|++++|+++|.+|..+.|..+.+..+.||+.+||+......+.|.... +.. ..+.+++++++++++++++
T Consensus 571 ~~L~~l~ls~N~l~~~~p~~~~~~~~~~~~~~~n~~lc~~~~~~~~~~c~~~~---~~~--~~~~~~~~~~~~~~~~~~~ 645 (968)
T PLN00113 571 ESLVQVNISHNHLHGSLPSTGAFLAINASAVAGNIDLCGGDTTSGLPPCKRVR---KTP--SWWFYITCTLGAFLVLALV 645 (968)
T ss_pred cccCEEeccCCcceeeCCCcchhcccChhhhcCCccccCCccccCCCCCcccc---ccc--eeeeehhHHHHHHHHHHHH
Confidence 7 999999999999999999999999999999999999987655556664321 111 1111121222222222222
Q ss_pred hhheeeEEeecccccCC---Ccccccc--------cccCHHHHHHHhcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEE
Q 039533 590 FGLVLCLVRKIKEKENP---SSSIYSL--------LYLSYQDLYNATSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKV 658 (949)
Q Consensus 590 ~~~~~~~~~~~~~~~~~---~~~~~~~--------~~~~~~~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~ 658 (949)
++++++++++++.+... ....+.. ..+++++ ....|...++||+|+||.||+|++..+++.||||+
T Consensus 646 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~ 722 (968)
T PLN00113 646 AFGFVFIRGRNNLELKRVENEDGTWELQFFDSKVSKSITIND---ILSSLKEENVISRGKKGASYKGKSIKNGMQFVVKE 722 (968)
T ss_pred HHHHHHHHhhhcccccccccccccccccccccccchhhhHHH---HHhhCCcccEEccCCCeeEEEEEECCCCcEEEEEE
Confidence 22222222221111110 0111111 1123333 33567888999999999999999988899999999
Q ss_pred EecCCCcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCccceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHH
Q 039533 659 FNLQHHGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLL 738 (949)
Q Consensus 659 ~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~ 738 (949)
++.... ....|++.+++++||||++++++|...+ ..++||||+++|+|.++++ .++|.
T Consensus 723 ~~~~~~----~~~~~~~~l~~l~HpnIv~~~~~~~~~~-----~~~lv~Ey~~~g~L~~~l~-------------~l~~~ 780 (968)
T PLN00113 723 INDVNS----IPSSEIADMGKLQHPNIVKLIGLCRSEK-----GAYLIHEYIEGKNLSEVLR-------------NLSWE 780 (968)
T ss_pred ccCCcc----ccHHHHHHHhhCCCCCcceEEEEEEcCC-----CCEEEEeCCCCCcHHHHHh-------------cCCHH
Confidence 864332 1235688999999999999999986554 7899999999999999995 27899
Q ss_pred HHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEeecccceecCCCCCccccccccCccCccCccccCCC
Q 039533 739 QRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGC 818 (949)
Q Consensus 739 ~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~ 818 (949)
++.+|+.|+|+|++|||+.++++|+||||||+||+++.++.+++. ||.+....... ...||..|+|||++.+.
T Consensus 781 ~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~-~~~~~~~~~~~------~~~~t~~y~aPE~~~~~ 853 (968)
T PLN00113 781 RRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLR-LSLPGLLCTDT------KCFISSAYVAPETRETK 853 (968)
T ss_pred HHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCceEEE-eccccccccCC------CccccccccCcccccCC
Confidence 999999999999999997767799999999999999999888875 66554332211 23588999999999999
Q ss_pred ccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhccccCCCc-hhhhcccCCCCCchhhhhhhchhhhhhhhhhHH
Q 039533 819 EVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKALPDD-VMDIVDSSLLPDDEDLILTGNQRQKQARINSII 897 (949)
Q Consensus 819 ~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~-~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~ 897 (949)
.++.++|||||||++|||+||+.||+...........|.+..+.+. ...++|+.+..... ...
T Consensus 854 ~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------~~~ 917 (968)
T PLN00113 854 DITEKSDIYGFGLILIELLTGKSPADAEFGVHGSIVEWARYCYSDCHLDMWIDPSIRGDVS----------------VNQ 917 (968)
T ss_pred CCCcccchhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHhcCccchhheeCccccCCCC----------------ccH
Confidence 9999999999999999999999999755444455555655444332 33444444432111 112
Q ss_pred HHHHHHHHHhhccccCCCCCCCCHHHHHHHHHHhHHhh
Q 039533 898 ECLISMVRIGVACSMELPQDRTNMTNVVHELQSIKNIL 935 (949)
Q Consensus 898 ~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~~~~ 935 (949)
++..++.+++.+||+.||++||||+||++.|+++....
T Consensus 918 ~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~L~~~~~~~ 955 (968)
T PLN00113 918 NEIVEVMNLALHCTATDPTARPCANDVLKTLESASRSS 955 (968)
T ss_pred HHHHHHHHHHHhhCcCCchhCcCHHHHHHHHHHhhccc
Confidence 44567889999999999999999999999999986643
No 2
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=3.8e-52 Score=526.57 Aligned_cols=450 Identities=33% Similarity=0.488 Sum_probs=352.8
Q ss_pred cEEEEEcCCCCCCccccCCCCCCCCCceeeccCceeccccCCcccCcccCcEEeeccccccCcCCCCCCCCccceeecCC
Q 039533 66 RVTLLDLRSLKLAGSVSHFIGNLSFLKQLYLQVNSFTHEIPSEIGGLRRLKVLALNNNSICGEIPTNISRCSTLIPIHPQ 145 (949)
Q Consensus 66 ~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~ 145 (949)
++..|||++|.+.+.+|..++++++|++|+|++|.+.+.+|..|+++++|++|+|++|.+.+.+|..++++++|++|+++
T Consensus 141 ~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~ 220 (968)
T PLN00113 141 NLETLDLSNNMLSGEIPNDIGSFSSLKVLDLGGNVLVGKIPNSLTNLTSLEFLTLASNQLVGQIPRELGQMKSLKWIYLG 220 (968)
T ss_pred CCCEEECcCCcccccCChHHhcCCCCCEEECccCcccccCChhhhhCcCCCeeeccCCCCcCcCChHHcCcCCccEEECc
Confidence 45566666666666677777777777777777777777777777777777777777777777777777777777777777
Q ss_pred CccccccccccccCCCCCcEEECCCCCCCCCCCCCcCCCCCccEEeccccccCCCCCCcccCCCccccccccCcccccc-
Q 039533 146 NNQLVGKILSRFSSLSKTEILNLGSNHLTGSIPSSLGNLSSIHTISLAYNNLDGTIPNSFGWFENLVFLSLAANNLSVV- 224 (949)
Q Consensus 146 ~n~l~~~~~~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~- 224 (949)
+|.+.+.+|..|.++++|++|+|++|.+++.+|..|+++++|++|+|++|++++.+|..++++++|++|+|++|.++..
T Consensus 221 ~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~ 300 (968)
T PLN00113 221 YNNLSGEIPYEIGGLTSLNHLDLVYNNLTGPIPSSLGNLKNLQYLFLYQNKLSGPIPPSIFSLQKLISLDLSDNSLSGEI 300 (968)
T ss_pred CCccCCcCChhHhcCCCCCEEECcCceeccccChhHhCCCCCCEEECcCCeeeccCchhHhhccCcCEEECcCCeeccCC
Confidence 7777777777777777777777777777777777777777777777777777777777777777777777777765421
Q ss_pred ----------------cccccCCCCC-hhhhccccccccccCCCCCCCCCCcchhccccccCcccEEEccCCCCCccCCc
Q 039533 225 ----------------ENKLTGEVPS-LEKLQRLQHFTITSNSLGSGGNDDLSFLCSLTNATRLTWMHINSNNFGGLLPG 287 (949)
Q Consensus 225 ----------------~~~l~~~~~~-l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~~~~L~~L~L~~N~l~~~~p~ 287 (949)
.|.+.+.+|. +..+++|+.|++++|++... .+..+..+++|+.|++++|++++.+|.
T Consensus 301 p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~------~p~~l~~~~~L~~L~Ls~n~l~~~~p~ 374 (968)
T PLN00113 301 PELVIQLQNLEILHLFSNNFTGKIPVALTSLPRLQVLQLWSNKFSGE------IPKNLGKHNNLTVLDLSTNNLTGEIPE 374 (968)
T ss_pred ChhHcCCCCCcEEECCCCccCCcCChhHhcCCCCCEEECcCCCCcCc------CChHHhCCCCCcEEECCCCeeEeeCCh
Confidence 1122222222 34444455555555544321 123345566677777777777777777
Q ss_pred hhhcccccccEEEccCccccCCCCCCCCCCCcccEEEeecceecccCCCcccccCCCCEEecCCcccccccCcccccccc
Q 039533 288 CISNLSKTIKTLFLNNNKIYGSIPAGIGNFVNLQRLDMWNNQLSGTIPPAIGELQNLKILGLNRNKLSGNIPPSIGNLKM 367 (949)
Q Consensus 288 ~~~~l~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 367 (949)
.+..+ .+|+.|++++|++.+.+|..++.+++|+.|+|++|++++.+|..|.++++|+.|+|++|++++.+|..+..+++
T Consensus 375 ~~~~~-~~L~~L~l~~n~l~~~~p~~~~~~~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 453 (968)
T PLN00113 375 GLCSS-GNLFKLILFSNSLEGEIPKSLGACRSLRRVRLQDNSFSGELPSEFTKLPLVYFLDISNNNLQGRINSRKWDMPS 453 (968)
T ss_pred hHhCc-CCCCEEECcCCEecccCCHHHhCCCCCCEEECcCCEeeeECChhHhcCCCCCEEECcCCcccCccChhhccCCC
Confidence 66665 35777777777777777888888888888889999888888888888999999999999999888888888999
Q ss_pred cceeecccccccccCCCCCCCCCCCcEEEeeCccccCCCCCcccCCcccceeeccCCCccCCCCccccccccccceeeec
Q 039533 368 LLNLFLNDNFLEVSIPSSLGQCESLIEINLSNNNLSGTIPPQFFSLSSLSISLDWSRNKLTGSLPIEVGKLKILEFLYVY 447 (949)
Q Consensus 368 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~l~~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls 447 (949)
|+.|++++|.+.+.+|..+. .++|+.|++++|++++.+|..+..+++| +.|++++|++++.+|..++.+++|++|+|+
T Consensus 454 L~~L~L~~n~~~~~~p~~~~-~~~L~~L~ls~n~l~~~~~~~~~~l~~L-~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 531 (968)
T PLN00113 454 LQMLSLARNKFFGGLPDSFG-SKRLENLDLSRNQFSGAVPRKLGSLSEL-MQLKLSENKLSGEIPDELSSCKKLVSLDLS 531 (968)
T ss_pred CcEEECcCceeeeecCcccc-cccceEEECcCCccCCccChhhhhhhcc-CEEECcCCcceeeCChHHcCccCCCEEECC
Confidence 99999999999988888764 6899999999999999999999999999 799999999999999999999999999999
Q ss_pred cccccccCCcccccccchhhcccCccccccccCCCcCCCCCCCEEECCCCcCCCcCcccccCCccceEeCCCCc-CcC
Q 039533 448 ENRLEGEIPSTFGNCIRLEQLGMGGNLFQGPISSSLGSLRGLRVLDLSQNNLSGEIPKFLAGLSLNNLNLSYND-LEG 524 (949)
Q Consensus 448 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~l~ls~N~-l~~ 524 (949)
+|.++|.+|..|+.+++|+.|+|++|+++|.+|..+..+++|+.|++++|+++|.+|..-....+....+.+|+ ++|
T Consensus 532 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~ls~N~l~~~~p~~~~~~~~~~~~~~~n~~lc~ 609 (968)
T PLN00113 532 HNQLSGQIPASFSEMPVLSQLDLSQNQLSGEIPKNLGNVESLVQVNISHNHLHGSLPSTGAFLAINASAVAGNIDLCG 609 (968)
T ss_pred CCcccccCChhHhCcccCCEEECCCCcccccCChhHhcCcccCEEeccCCcceeeCCCcchhcccChhhhcCCccccC
Confidence 99999999999999999999999999999999999999999999999999999999976443345556667776 444
No 3
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.3e-49 Score=432.43 Aligned_cols=291 Identities=37% Similarity=0.650 Sum_probs=245.1
Q ss_pred cccccCHHHHHHHhcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCCcchHHHHHHHHHHHhcCCCcceeEEee
Q 039533 612 SLLYLSYQDLYNATSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHGASRSFIAECKALKSIRHRNLVKVLTA 691 (949)
Q Consensus 612 ~~~~~~~~~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~ 691 (949)
....|++.++..||++|...++||+|+||.||+|... +++.||||++........++|.+|++++.+++|||+|+++||
T Consensus 61 ~~~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~-~~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nlv~LlGy 139 (361)
T KOG1187|consen 61 PLRSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLS-DGTVVAVKRLSSNSGQGEREFLNEVEILSRLRHPNLVKLLGY 139 (361)
T ss_pred CcceeeHHHHHHHHhCCchhcceecCCCeEEEEEEEC-CCCEEEEEEecCCCCcchhHHHHHHHHHhcCCCcCcccEEEE
Confidence 4667999999999999999999999999999999998 458999998865443214669999999999999999999999
Q ss_pred eecccccCCccceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCC
Q 039533 692 CLGADYRGNDFKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSN 771 (949)
Q Consensus 692 ~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~N 771 (949)
|.+.+. ..++|||||++|+|.++++... .. .++|.++++||.++|+||+|||+.+.++|+||||||+|
T Consensus 140 C~e~~~----~~~LVYEym~nGsL~d~L~~~~-------~~-~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssN 207 (361)
T KOG1187|consen 140 CLEGGE----HRLLVYEYMPNGSLEDHLHGKK-------GE-PLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSN 207 (361)
T ss_pred EecCCc----eEEEEEEccCCCCHHHHhCCCC-------CC-CCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHH
Confidence 986551 4899999999999999998321 11 78999999999999999999999988899999999999
Q ss_pred eeecCCCceEEeecccceecCC-CCCccccccc-cCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCcccc-c
Q 039533 772 VLLDDYMTARVGDFGLARILSP-DHTQTSSFSV-KGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMF-E 848 (949)
Q Consensus 772 Ill~~~~~~kl~DfG~a~~~~~-~~~~~~~~~~-~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~-~ 848 (949)
||+|+++++||+|||+|+.... ..... .. .||.+|+|||+...+..++|+|||||||++.|++||+.|.+... .
T Consensus 208 ILLD~~~~aKlsDFGLa~~~~~~~~~~~---~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~ 284 (361)
T KOG1187|consen 208 ILLDEDFNAKLSDFGLAKLGPEGDTSVS---TTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPR 284 (361)
T ss_pred eeECCCCCEEccCccCcccCCcccccee---eecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCCc
Confidence 9999999999999999976544 22211 11 69999999999999999999999999999999999999988654 3
Q ss_pred cCchhhhhccccCCC-chhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHH
Q 039533 849 GDINLHNFGRKALPD-DVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHE 927 (949)
Q Consensus 849 ~~~~~~~~~~~~~~~-~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 927 (949)
+...+..|.+..+.+ .+.+++|+.+...... ..+...++.+++.+|++.+|++||+|.||+++
T Consensus 285 ~~~~l~~w~~~~~~~~~~~eiiD~~l~~~~~~----------------~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~ 348 (361)
T KOG1187|consen 285 GELSLVEWAKPLLEEGKLREIVDPRLKEGEYP----------------DEKEVKKLAELALRCLRPDPKERPTMSQVVKE 348 (361)
T ss_pred ccccHHHHHHHHHHCcchhheeCCCccCCCCC----------------hHHHHHHHHHHHHHHcCcCCCcCcCHHHHHHH
Confidence 445578887777666 4889999988632210 01456779999999999999999999999999
Q ss_pred HHHhHHh
Q 039533 928 LQSIKNI 934 (949)
Q Consensus 928 L~~i~~~ 934 (949)
|+.+...
T Consensus 349 L~~~~~~ 355 (361)
T KOG1187|consen 349 LEGILSL 355 (361)
T ss_pred HHhhccc
Confidence 9766543
No 4
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=100.00 E-value=2.2e-45 Score=376.12 Aligned_cols=254 Identities=24% Similarity=0.328 Sum_probs=207.1
Q ss_pred CCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCC-cchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCcccee
Q 039533 627 GFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHH-GASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFKAS 705 (949)
Q Consensus 627 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 705 (949)
+.+..+.||+|..|+||+++++.+++.+|+|++..... ...+++.+|++++++.+||+||.+||+|.... . ..++
T Consensus 80 dle~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~---~-~isI 155 (364)
T KOG0581|consen 80 DLERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNG---E-EISI 155 (364)
T ss_pred HhhhhhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCC---c-eEEe
Confidence 34556899999999999999999999999999964433 34578999999999999999999999986543 1 5899
Q ss_pred EeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEeec
Q 039533 706 VYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVGDF 785 (949)
Q Consensus 706 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~Df 785 (949)
+||||++|+|++++. ..+.+++...-+|+.+|++||.|||+. ++||||||||+|||++..|++|||||
T Consensus 156 ~mEYMDgGSLd~~~k----------~~g~i~E~~L~~ia~~VL~GL~YLh~~--~~IIHRDIKPsNlLvNskGeVKicDF 223 (364)
T KOG0581|consen 156 CMEYMDGGSLDDILK----------RVGRIPEPVLGKIARAVLRGLSYLHEE--RKIIHRDIKPSNLLVNSKGEVKICDF 223 (364)
T ss_pred ehhhcCCCCHHHHHh----------hcCCCCHHHHHHHHHHHHHHHHHHhhc--cCeeeccCCHHHeeeccCCCEEeccc
Confidence 999999999999997 236689999999999999999999963 28999999999999999999999999
Q ss_pred ccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhccccCCCch
Q 039533 786 GLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKALPDDV 865 (949)
Q Consensus 786 G~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~ 865 (949)
|.++.+... .....+||..|||||.+.+..|+.++||||||++++|+.+|+.||....+.. ..+
T Consensus 224 GVS~~lvnS----~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~------------~~~ 287 (364)
T KOG0581|consen 224 GVSGILVNS----IANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPY------------LDI 287 (364)
T ss_pred cccHHhhhh----hcccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCCC------------CCH
Confidence 999887655 2235679999999999999999999999999999999999999996431111 112
Q ss_pred hhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 039533 866 MDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVH 926 (949)
Q Consensus 866 ~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 926 (949)
.++++......+. +.+. ..+.+++..++..|+++||.+|||++|+++
T Consensus 288 ~~Ll~~Iv~~ppP-------------~lP~-~~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~ 334 (364)
T KOG0581|consen 288 FELLCAIVDEPPP-------------RLPE-GEFSPEFRSFVSCCLRKDPSERPSAKQLLQ 334 (364)
T ss_pred HHHHHHHhcCCCC-------------CCCc-ccCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 2222222221111 0000 035678999999999999999999999875
No 5
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-44 Score=392.33 Aligned_cols=263 Identities=33% Similarity=0.468 Sum_probs=212.4
Q ss_pred CCCCeeeeecCceEEEEEEcCCCEE-EEEEEEecCCCcc--hHHHHHHHHHHHhcCCCcceeEEeeeecccccCCcccee
Q 039533 629 SSANLVGVGSFGSVYKGIIDEGRTT-IAVKVFNLQHHGA--SRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFKAS 705 (949)
Q Consensus 629 ~~~~~lg~G~~g~Vy~~~~~~~~~~-vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 705 (949)
.+.+.+|+|+||+||+|.+. |+. ||||++....... .+.|.+|+.++.+++|||||+++|+|..... ..++
T Consensus 44 ~~~~~iG~G~~g~V~~~~~~--g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~----~~~i 117 (362)
T KOG0192|consen 44 PIEEVLGSGSFGTVYKGKWR--GTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPG----SLCI 117 (362)
T ss_pred hhhhhcccCCceeEEEEEeC--CceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCC----ceEE
Confidence 44566999999999999998 455 9999997554332 4589999999999999999999999875431 5799
Q ss_pred EeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCC-eEecCCCCCCeeecCCC-ceEEe
Q 039533 706 VYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPV-TAHCDLKPSNVLLDDYM-TARVG 783 (949)
Q Consensus 706 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~-ivHrDlkp~NIll~~~~-~~kl~ 783 (949)
||||+++|+|.++++.. ....+++..++.|+.|||+|+.|||++ + ||||||||+|||++.++ ++||+
T Consensus 118 VtEy~~~GsL~~~l~~~--------~~~~l~~~~~l~~aldiArGm~YLH~~---~~iIHrDLK~~NiLv~~~~~~~KI~ 186 (362)
T KOG0192|consen 118 VTEYMPGGSLSVLLHKK--------RKRKLPLKVRLRIALDIARGMEYLHSE---GPIIHRDLKSDNILVDLKGKTLKIA 186 (362)
T ss_pred EEEeCCCCcHHHHHhhc--------ccCCCCHHHHHHHHHHHHHHHHHHhcC---CCeeecccChhhEEEcCCCCEEEEC
Confidence 99999999999999831 256799999999999999999999988 5 99999999999999997 99999
Q ss_pred ecccceecCCCCCccccccccCccCccCccccC--CCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhccccC
Q 039533 784 DFGLARILSPDHTQTSSFSVKGSLGYIAPEYGV--GCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKAL 861 (949)
Q Consensus 784 DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~--~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~ 861 (949)
|||+++...... .......||+.|||||++. ...|+.|+||||||+++|||+||+.||.........
T Consensus 187 DFGlsr~~~~~~--~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~~~~~--------- 255 (362)
T KOG0192|consen 187 DFGLSREKVISK--TSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAPVQVA--------- 255 (362)
T ss_pred CCccceeecccc--ccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCHHHHH---------
Confidence 999998766432 1122356999999999999 568999999999999999999999999754331111
Q ss_pred CCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHHhHHhhccCCCC
Q 039533 862 PDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHELQSIKNILLGVELC 941 (949)
Q Consensus 862 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~~~~~~~~~~ 941 (949)
..++.....+. ...+++..+..++.+||+.||+.||++.|++..|+.+........+.
T Consensus 256 ----~~v~~~~~Rp~------------------~p~~~~~~l~~l~~~CW~~dp~~RP~f~ei~~~l~~~~~~~~~~~~~ 313 (362)
T KOG0192|consen 256 ----SAVVVGGLRPP------------------IPKECPPHLSSLMERCWLVDPSRRPSFLEIVSRLESIMSHISSAGPE 313 (362)
T ss_pred ----HHHHhcCCCCC------------------CCccCCHHHHHHHHHhCCCCCCcCCCHHHHHHHHHHHHHhhcccCcc
Confidence 11111111111 11236778899999999999999999999999999998877765333
No 6
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=2.4e-44 Score=371.05 Aligned_cols=277 Identities=26% Similarity=0.419 Sum_probs=210.0
Q ss_pred HhcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecC--CCcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCc
Q 039533 624 ATSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQ--HHGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGND 701 (949)
Q Consensus 624 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 701 (949)
...+|...+.||+|+||+||+|+++.++..||||.+... .....+.+..|+++|+.++|||||++++++...+
T Consensus 8 ~~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~----- 82 (429)
T KOG0595|consen 8 VVGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDD----- 82 (429)
T ss_pred ccccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCC-----
Confidence 356899999999999999999999999999999999766 3344567889999999999999999999977665
Q ss_pred cceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCC----
Q 039533 702 FKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDY---- 777 (949)
Q Consensus 702 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~---- 777 (949)
+.|+|||||.||+|.+|++ ..+.+++..++.++.|+|.||++||++ +||||||||+|||++..
T Consensus 83 ~i~lVMEyC~gGDLs~yi~----------~~~~l~e~t~r~Fm~QLA~alq~L~~~---~IiHRDLKPQNiLLs~~~~~~ 149 (429)
T KOG0595|consen 83 FIYLVMEYCNGGDLSDYIR----------RRGRLPEATARHFMQQLASALQFLHEN---NIIHRDLKPQNILLSTTARND 149 (429)
T ss_pred eEEEEEEeCCCCCHHHHHH----------HcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCcceEEeccCCCCC
Confidence 8999999999999999998 345799999999999999999999988 89999999999999754
Q ss_pred --CceEEeecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhh
Q 039533 778 --MTARVGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHN 855 (949)
Q Consensus 778 --~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~ 855 (949)
-.+||+|||+|+.+.+..... ...|++.|||||++..++|+.|+|+||.|+++|++++|+.||+.....+. ..
T Consensus 150 ~~~~LKIADFGfAR~L~~~~~a~---tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t~~eL--~~ 224 (429)
T KOG0595|consen 150 TSPVLKIADFGFARFLQPGSMAE---TLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAETPKEL--LL 224 (429)
T ss_pred CCceEEecccchhhhCCchhHHH---HhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccccCHHHH--HH
Confidence 568999999999987554322 46699999999999999999999999999999999999999974432211 11
Q ss_pred hccccCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHHhH
Q 039533 856 FGRKALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHELQSIK 932 (949)
Q Consensus 856 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~ 932 (949)
+.++ ...........+.....+.+....++++..+.. ....+....+..+|.+|+.+.++-......+
T Consensus 225 ~~~k--~~~~~~~~~~~~s~~~~~Ll~~ll~~~~~~~~~-------~~~~~~~~~l~~~p~~~~~~~~~~~~~~~~~ 292 (429)
T KOG0595|consen 225 YIKK--GNEIVPVLPAELSNPLRELLISLLQRNPKDRIS-------FEDFFDHPFLAANPQDRADAFELESRTDQVK 292 (429)
T ss_pred HHhc--cccccCchhhhccCchhhhhhHHHhcCccccCc-------hHHhhhhhhcccCcccccCcccccccccccc
Confidence 1110 011111111111111112222222222222211 1234566778888999988887766655543
No 7
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=8.6e-44 Score=385.20 Aligned_cols=249 Identities=23% Similarity=0.327 Sum_probs=208.7
Q ss_pred cCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecC---CCcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCcc
Q 039533 626 SGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQ---HHGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDF 702 (949)
Q Consensus 626 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 702 (949)
.+|...+.||+|||+.||++++..+|..||+|++... .....+...+|+++.++++|||||+++++|.+.+ .
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~-----n 92 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSN-----N 92 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCC-----c
Confidence 5699999999999999999999779999999999753 3344578899999999999999999999976555 8
Q ss_pred ceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEE
Q 039533 703 KASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARV 782 (949)
Q Consensus 703 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl 782 (949)
.|+|.|+|+.++|.++++ ..+.+++.+++.++.||+.||.|||+. +|+|||||-.|++++++.++||
T Consensus 93 VYivLELC~~~sL~el~K----------rrk~ltEpEary~l~QIv~GlkYLH~~---~IiHRDLKLGNlfL~~~~~VKI 159 (592)
T KOG0575|consen 93 VYIVLELCHRGSLMELLK----------RRKPLTEPEARYFLRQIVEGLKYLHSL---GIIHRDLKLGNLFLNENMNVKI 159 (592)
T ss_pred eEEEEEecCCccHHHHHH----------hcCCCCcHHHHHHHHHHHHHHHHHHhc---CceecccchhheeecCcCcEEe
Confidence 999999999999999997 457799999999999999999999987 8999999999999999999999
Q ss_pred eecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhccccCC
Q 039533 783 GDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKALP 862 (949)
Q Consensus 783 ~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~ 862 (949)
+|||+|..+..+..... ...||+.|.|||++.....+..+||||+|||+|-|++|++||+...-.+ .+.....
T Consensus 160 gDFGLAt~le~~~Erk~--TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~vke-ty~~Ik~---- 232 (592)
T KOG0575|consen 160 GDFGLATQLEYDGERKK--TLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKTVKE-TYNKIKL---- 232 (592)
T ss_pred cccceeeeecCcccccc--eecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccchHHH-HHHHHHh----
Confidence 99999999876644332 4679999999999999999999999999999999999999997431110 0000000
Q ss_pred CchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHH
Q 039533 863 DDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHE 927 (949)
Q Consensus 863 ~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 927 (949)
. .+..+.....+..+++..+++.||.+|||+++|+..
T Consensus 233 ------------~----------------~Y~~P~~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~h 269 (592)
T KOG0575|consen 233 ------------N----------------EYSMPSHLSAEAKDLIRKLLRPNPSERPSLDEVLDH 269 (592)
T ss_pred ------------c----------------CcccccccCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 0 000111334456889999999999999999999863
No 8
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.5e-44 Score=369.77 Aligned_cols=252 Identities=21% Similarity=0.264 Sum_probs=201.0
Q ss_pred cCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCC-------cchHHHHHHHHHHHhcCCCcceeEEeeeeccccc
Q 039533 626 SGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHH-------GASRSFIAECKALKSIRHRNLVKVLTACLGADYR 698 (949)
Q Consensus 626 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-------~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 698 (949)
+.|.+.+.||+|+||.|-+|..+.+++.||||+++.... .......+|+++|++++|||||++++++...+
T Consensus 172 d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~d-- 249 (475)
T KOG0615|consen 172 DYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPD-- 249 (475)
T ss_pred ceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCC--
Confidence 457788999999999999999999999999999974421 12345679999999999999999999976555
Q ss_pred CCccceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCC-
Q 039533 699 GNDFKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDY- 777 (949)
Q Consensus 699 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~- 777 (949)
..|+||||++||+|.+++- ..+.+.+.....+++|++.|+.|||++ ||+||||||+|||+..+
T Consensus 250 ---s~YmVlE~v~GGeLfd~vv----------~nk~l~ed~~K~~f~Qll~avkYLH~~---GI~HRDiKPeNILl~~~~ 313 (475)
T KOG0615|consen 250 ---SSYMVLEYVEGGELFDKVV----------ANKYLREDLGKLLFKQLLTAVKYLHSQ---GIIHRDIKPENILLSNDA 313 (475)
T ss_pred ---ceEEEEEEecCccHHHHHH----------hccccccchhHHHHHHHHHHHHHHHHc---CcccccCCcceEEeccCC
Confidence 7899999999999999996 345567777889999999999999988 99999999999999755
Q ss_pred --CceEEeecccceecCCCCCccccccccCccCccCccccCCCcc---CCccchHHHHHHHHHHHhCCCCCccccccCch
Q 039533 778 --MTARVGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEV---STNGDVYSYGILLLELVIGKKPIDIMFEGDIN 852 (949)
Q Consensus 778 --~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~---~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~ 852 (949)
..+||+|||+|+..+...... ...||+.|.|||++.+..+ ..++|+||+||++|-+++|.+||.........
T Consensus 314 e~~llKItDFGlAK~~g~~sfm~---TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~sl 390 (475)
T KOG0615|consen 314 EDCLLKITDFGLAKVSGEGSFMK---TLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDPSL 390 (475)
T ss_pred cceEEEecccchhhccccceehh---hhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCccH
Confidence 789999999999887443322 4679999999999887643 34789999999999999999999644322111
Q ss_pred hhhhccccCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 039533 853 LHNFGRKALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVH 926 (949)
Q Consensus 853 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 926 (949)
....... ..... . +.+.++.++..+++.+|+..||++|||++|+++
T Consensus 391 ~eQI~~G------------~y~f~-------------p---~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~ 436 (475)
T KOG0615|consen 391 KEQILKG------------RYAFG-------------P---LQWDRISEEALDLINWMLVVDPENRPSADEALN 436 (475)
T ss_pred HHHHhcC------------ccccc-------------C---hhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhc
Confidence 1111110 00000 0 122366777899999999999999999999875
No 9
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.4e-44 Score=351.35 Aligned_cols=262 Identities=25% Similarity=0.357 Sum_probs=209.0
Q ss_pred cCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCC--CcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCccc
Q 039533 626 SGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQH--HGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFK 703 (949)
Q Consensus 626 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 703 (949)
.+|.+.++||+|.||+||++....+|..||.|.++... ..+.+....|+.+|++++|||||++++.-. .++....
T Consensus 19 ~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f---~~~~evl 95 (375)
T KOG0591|consen 19 ADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSF---IEDNEVL 95 (375)
T ss_pred HHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhh---hccchhh
Confidence 45888899999999999999999999999999987443 334467889999999999999999987432 2234458
Q ss_pred eeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCC--eEecCCCCCCeeecCCCceE
Q 039533 704 ASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPV--TAHCDLKPSNVLLDDYMTAR 781 (949)
Q Consensus 704 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~--ivHrDlkp~NIll~~~~~~k 781 (949)
++||||+..|+|...++.++. ..+.+++..+++++.|++.||.++|+. -+. |+||||||.||+++.+|.+|
T Consensus 96 nivmE~c~~GDLsqmIk~~K~------qkr~ipE~~Vwk~f~QL~~AL~~cH~~-~~r~~VmHRDIKPaNIFl~~~gvvK 168 (375)
T KOG0591|consen 96 NIVMELCDAGDLSQMIKHFKK------QKRLIPEKTVWKYFVQLCRALYHCHSK-IPRGTVMHRDIKPANIFLTANGVVK 168 (375)
T ss_pred HHHHHhhcccCHHHHHHHHHh------ccccCchHHHHHHHHHHHHHHHHHhcc-ccccceeeccCcchheEEcCCCcee
Confidence 999999999999999985543 456799999999999999999999984 234 99999999999999999999
Q ss_pred EeecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhccccC
Q 039533 782 VGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKAL 861 (949)
Q Consensus 782 l~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~ 861 (949)
|+|||+++.+....+... +.+|||.||+||.+.+.+|+.||||||+||++|||+.-++||... ++.....+
T Consensus 169 LGDfGL~r~l~s~~tfA~--S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~-----n~~~L~~K-- 239 (375)
T KOG0591|consen 169 LGDFGLGRFLSSKTTFAH--SLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGD-----NLLSLCKK-- 239 (375)
T ss_pred eccchhHhHhcchhHHHH--hhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccc-----cHHHHHHH--
Confidence 999999999876655433 578999999999999999999999999999999999999999632 22111111
Q ss_pred CCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHH
Q 039533 862 PDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHELQS 930 (949)
Q Consensus 862 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~ 930 (949)
+......+-|. .-.+..+.+++..|+..||+.||+...+++.+..
T Consensus 240 ------I~qgd~~~~p~------------------~~YS~~l~~li~~ci~vd~~~RP~t~~~v~di~~ 284 (375)
T KOG0591|consen 240 ------IEQGDYPPLPD------------------EHYSTDLRELINMCIAVDPEQRPDTVPYVQDIQS 284 (375)
T ss_pred ------HHcCCCCCCcH------------------HHhhhHHHHHHHHHccCCcccCCCcchHHHHHHH
Confidence 11111111111 1345678899999999999999996555554443
No 10
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=3.6e-43 Score=377.43 Aligned_cols=255 Identities=30% Similarity=0.449 Sum_probs=212.3
Q ss_pred CCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCCcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCccceeEee
Q 039533 629 SSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFKASVYE 708 (949)
Q Consensus 629 ~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e 708 (949)
+..+.||+|.||.||.|.++ +...||+|.++... ...+.|.+|+++|++++|++||+++++|...+ ..+||||
T Consensus 209 ~l~~~LG~G~FG~V~~g~~~-~~~~vavk~ik~~~-m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~-----piyIVtE 281 (468)
T KOG0197|consen 209 KLIRELGSGQFGEVWLGKWN-GSTKVAVKTIKEGS-MSPEAFLREAQIMKKLRHEKLVKLYGVCTKQE-----PIYIVTE 281 (468)
T ss_pred HHHHHhcCCccceEEEEEEc-CCCcccceEEeccc-cChhHHHHHHHHHHhCcccCeEEEEEEEecCC-----ceEEEEE
Confidence 44578999999999999998 45689999997653 33478899999999999999999999997654 6899999
Q ss_pred eccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEeecccc
Q 039533 709 FMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVGDFGLA 788 (949)
Q Consensus 709 ~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~DfG~a 788 (949)
||+.|+|.+|++. ..+..+...+.+.++.|||+|++||+++ ++|||||.++||||+++..+||+|||+|
T Consensus 282 ~m~~GsLl~yLr~--------~~~~~l~~~~Ll~~a~qIaeGM~YLes~---~~IHRDLAARNiLV~~~~~vKIsDFGLA 350 (468)
T KOG0197|consen 282 YMPKGSLLDYLRT--------REGGLLNLPQLLDFAAQIAEGMAYLESK---NYIHRDLAARNILVDEDLVVKISDFGLA 350 (468)
T ss_pred ecccCcHHHHhhh--------cCCCccchHHHHHHHHHHHHHHHHHHhC---CccchhhhhhheeeccCceEEEcccccc
Confidence 9999999999973 2356788999999999999999999988 8999999999999999999999999999
Q ss_pred eecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHh-CCCCCccccccCchhhhhccccCCCchhh
Q 039533 789 RILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVI-GKKPIDIMFEGDINLHNFGRKALPDDVMD 867 (949)
Q Consensus 789 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~ 867 (949)
+...++.. .......-...|.|||.+..++++.|||||||||+||||+| |+.||..+...+ +.+
T Consensus 351 r~~~d~~Y-~~~~~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn~e--------------v~~ 415 (468)
T KOG0197|consen 351 RLIGDDEY-TASEGGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSNEE--------------VLE 415 (468)
T ss_pred cccCCCce-eecCCCCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCCHHH--------------HHH
Confidence 95544433 22223335678999999999999999999999999999999 999986442211 111
Q ss_pred hcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHHhHHh
Q 039533 868 IVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHELQSIKNI 934 (949)
Q Consensus 868 ~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~~~ 934 (949)
+...+.|.+.+..||..+.+++..||+.+|++|||++.+...++++...
T Consensus 416 ------------------~le~GyRlp~P~~CP~~vY~lM~~CW~~~P~~RPtF~~L~~~l~~~~~~ 464 (468)
T KOG0197|consen 416 ------------------LLERGYRLPRPEGCPDEVYELMKSCWHEDPEDRPTFETLREVLEDFFTS 464 (468)
T ss_pred ------------------HHhccCcCCCCCCCCHHHHHHHHHHhhCCcccCCCHHHHHHHHHHhhhc
Confidence 1223344555668999999999999999999999999999999887654
No 11
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=100.00 E-value=4.4e-42 Score=369.28 Aligned_cols=274 Identities=28% Similarity=0.428 Sum_probs=217.8
Q ss_pred hcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCCc--chHHHHHHHHHHHhcCCCcceeEEeeeecccccCCcc
Q 039533 625 TSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHG--ASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDF 702 (949)
Q Consensus 625 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 702 (949)
.+...+.+.||+|+||+||+|++.+ .||||++...... ..+.|++|+..+++-+|.||+-+.|||..+.
T Consensus 391 ~~ev~l~~rIGsGsFGtV~Rg~whG---dVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p~------ 461 (678)
T KOG0193|consen 391 PEEVLLGERIGSGSFGTVYRGRWHG---DVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMNPP------ 461 (678)
T ss_pred HHHhhccceeccccccceeeccccc---ceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcCCc------
Confidence 3445677899999999999999983 4999999866543 4478999999999999999999999987655
Q ss_pred ceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEE
Q 039533 703 KASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARV 782 (949)
Q Consensus 703 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl 782 (949)
..||+.+|+|-+|+.+++- ....++..+.+.||.|||+|+.|||++ +|||||||..||++.+++.|||
T Consensus 462 ~AIiTqwCeGsSLY~hlHv---------~etkfdm~~~idIAqQiaqGM~YLHAK---~IIHrDLKSnNIFl~~~~kVkI 529 (678)
T KOG0193|consen 462 LAIITQWCEGSSLYTHLHV---------QETKFDMNTTIDIAQQIAQGMDYLHAK---NIIHRDLKSNNIFLHEDLKVKI 529 (678)
T ss_pred eeeeehhccCchhhhhccc---------hhhhhhHHHHHHHHHHHHHhhhhhhhh---hhhhhhccccceEEccCCcEEE
Confidence 4999999999999999982 345689999999999999999999988 9999999999999999999999
Q ss_pred eecccceecCCCCCccccccccCccCccCccccCCC---ccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhccc
Q 039533 783 GDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGC---EVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRK 859 (949)
Q Consensus 783 ~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~ 859 (949)
+|||++..-.............|...|||||++..+ +|++.+||||||+|+|||+||..||.....+.+.++ ..+.
T Consensus 530 gDFGLatvk~~w~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~~~dqIifm-VGrG 608 (678)
T KOG0193|consen 530 GDFGLATVKTRWSGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQNRDQIIFM-VGRG 608 (678)
T ss_pred ecccceeeeeeeccccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCCChhheEEE-eccc
Confidence 999999764433221111234488999999997754 689999999999999999999999972222211111 1111
Q ss_pred cCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHHhHHhhccCC
Q 039533 860 ALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHELQSIKNILLGVE 939 (949)
Q Consensus 860 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~~~~~~~~ 939 (949)
+. .++.. .....+++++.+|+..||..+|++||.+.+|+..|+.+..+..+-.
T Consensus 609 ~l------------~pd~s---------------~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~~l~~l~~~~pki~ 661 (678)
T KOG0193|consen 609 YL------------MPDLS---------------KIRSNCPKAMKRLLSDCWKFDREERPLFPQLLSKLEELLPSLPKIN 661 (678)
T ss_pred cc------------Cccch---------------hhhccCHHHHHHHHHHHHhcCcccCccHHHHHHHHHHhhhcccccc
Confidence 11 11111 1123678899999999999999999999999999999988776666
Q ss_pred CCCCcccc
Q 039533 940 LCPPCKVV 947 (949)
Q Consensus 940 ~~~~~~~~ 947 (949)
.+|.++++
T Consensus 662 RS~S~P~~ 669 (678)
T KOG0193|consen 662 RSASEPVL 669 (678)
T ss_pred cCcCccch
Confidence 66666654
No 12
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=100.00 E-value=9.2e-42 Score=349.62 Aligned_cols=202 Identities=29% Similarity=0.388 Sum_probs=180.1
Q ss_pred HhcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCC---CcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCC
Q 039533 624 ATSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQH---HGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGN 700 (949)
Q Consensus 624 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 700 (949)
..++|++.++||+|+||.||.++.+++++.+|+|++++.. ....+...+|..++.+++||+||+++..|.+.+
T Consensus 23 ~~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~---- 98 (357)
T KOG0598|consen 23 GPDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEE---- 98 (357)
T ss_pred ChhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCC----
Confidence 3568999999999999999999999999999999997543 234577889999999999999999998765554
Q ss_pred ccceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCce
Q 039533 701 DFKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTA 780 (949)
Q Consensus 701 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~ 780 (949)
..|+|+||+.||.|..+|+ ..+.+++..++-++.+|+.||.|||+. +||||||||+|||+|++|++
T Consensus 99 -kLylVld~~~GGeLf~hL~----------~eg~F~E~~arfYlaEi~lAL~~LH~~---gIiyRDlKPENILLd~~GHi 164 (357)
T KOG0598|consen 99 -KLYLVLDYLNGGELFYHLQ----------REGRFSEDRARFYLAEIVLALGYLHSK---GIIYRDLKPENILLDEQGHI 164 (357)
T ss_pred -eEEEEEeccCCccHHHHHH----------hcCCcchhHHHHHHHHHHHHHHHHHhC---CeeeccCCHHHeeecCCCcE
Confidence 8999999999999999997 356789999999999999999999977 99999999999999999999
Q ss_pred EEeecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCcc
Q 039533 781 RVGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDI 845 (949)
Q Consensus 781 kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~ 845 (949)
+|+|||+++..-.....+. .+.||+.|||||++.+..|+.++|.||+|+++|||++|.+||..
T Consensus 165 ~LtDFgL~k~~~~~~~~t~--tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~ 227 (357)
T KOG0598|consen 165 KLTDFGLCKEDLKDGDATR--TFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYA 227 (357)
T ss_pred EEeccccchhcccCCCccc--cccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcC
Confidence 9999999996544433332 46799999999999999999999999999999999999999963
No 13
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=100.00 E-value=1.3e-41 Score=335.72 Aligned_cols=271 Identities=23% Similarity=0.284 Sum_probs=204.0
Q ss_pred cCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCC--cchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCccc
Q 039533 626 SGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHH--GASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFK 703 (949)
Q Consensus 626 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 703 (949)
+.|+...++|+|+||.||+++++.+|+.||||++....+ ...+-.++|++++++++|+|+|.++++|.. ....
T Consensus 2 ekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrr-----krkl 76 (396)
T KOG0593|consen 2 EKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRR-----KRKL 76 (396)
T ss_pred cHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHh-----ccee
Confidence 457788899999999999999999999999999964433 223567899999999999999999999643 4489
Q ss_pred eeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEe
Q 039533 704 ASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVG 783 (949)
Q Consensus 704 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~ 783 (949)
++|+||++..-|.+.=+ .+..++...+.+++.|++.|+.|+|++ +++||||||+|||++.+|.+|||
T Consensus 77 hLVFE~~dhTvL~eLe~----------~p~G~~~~~vk~~l~Q~l~ai~~cHk~---n~IHRDIKPENILit~~gvvKLC 143 (396)
T KOG0593|consen 77 HLVFEYCDHTVLHELER----------YPNGVPSELVKKYLYQLLKAIHFCHKN---NCIHRDIKPENILITQNGVVKLC 143 (396)
T ss_pred EEEeeecchHHHHHHHh----------ccCCCCHHHHHHHHHHHHHHhhhhhhc---CeecccCChhheEEecCCcEEec
Confidence 99999998855554432 455688899999999999999999987 89999999999999999999999
Q ss_pred ecccceecCC-CCCccccccccCccCccCccccCC-CccCCccchHHHHHHHHHHHhCCCCCccccccCchhh-hhcccc
Q 039533 784 DFGLARILSP-DHTQTSSFSVKGSLGYIAPEYGVG-CEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLH-NFGRKA 860 (949)
Q Consensus 784 DfG~a~~~~~-~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~-~~~~~~ 860 (949)
|||+|+.+.. ....+ ..+.|.+|+|||.+.+ .+|+..+||||.||++.||++|.+-|....+-+.-+. ...-..
T Consensus 144 DFGFAR~L~~pgd~YT---DYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~ 220 (396)
T KOG0593|consen 144 DFGFARTLSAPGDNYT---DYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGN 220 (396)
T ss_pred cchhhHhhcCCcchhh---hhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcc
Confidence 9999999874 33333 4568999999999888 6899999999999999999999999864433222111 001111
Q ss_pred CCCchhhhcccC------CCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 039533 861 LPDDVMDIVDSS------LLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVH 926 (949)
Q Consensus 861 ~~~~~~~~~d~~------l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 926 (949)
+.+....++... -.+++.+ +..-..........+.+++..|++.||++|++.+|++.
T Consensus 221 L~prhq~iF~~N~~F~Gv~lP~~~~---------~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~ 283 (396)
T KOG0593|consen 221 LIPRHQSIFSSNPFFHGVRLPEPEH---------PEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLH 283 (396)
T ss_pred cCHHHHHHhccCCceeeeecCCCCC---------ccchhhhcccchHHHHHHHHHHhcCCccccccHHHHhc
Confidence 112222222111 1111110 00001112234457899999999999999999999864
No 14
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=100.00 E-value=2e-41 Score=359.95 Aligned_cols=254 Identities=23% Similarity=0.294 Sum_probs=207.1
Q ss_pred HHHhcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCC---CcchHHHHHHHHHHHhc-CCCcceeEEeeeecccc
Q 039533 622 YNATSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQH---HGASRSFIAECKALKSI-RHRNLVKVLTACLGADY 697 (949)
Q Consensus 622 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~ 697 (949)
.....+|.+++.||+|+|++||+|+...+++.+|||++.+.. +...+.+..|-.+|.++ .||.|++++-.|.+..
T Consensus 69 kk~~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~- 147 (604)
T KOG0592|consen 69 KKTPNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEE- 147 (604)
T ss_pred cCChhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeeccc-
Confidence 345678999999999999999999999999999999997442 23345677899999999 8999999998866554
Q ss_pred cCCccceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCC
Q 039533 698 RGNDFKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDY 777 (949)
Q Consensus 698 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~ 777 (949)
..|+|+||+++|+|.++|+ ..+.+++..++.++.||+.||+|||++ |||||||||+|||+|++
T Consensus 148 ----sLYFvLe~A~nGdll~~i~----------K~Gsfde~caR~YAAeIldAleylH~~---GIIHRDlKPENILLd~d 210 (604)
T KOG0592|consen 148 ----SLYFVLEYAPNGDLLDLIK----------KYGSFDETCARFYAAEILDALEYLHSN---GIIHRDLKPENILLDKD 210 (604)
T ss_pred ----ceEEEEEecCCCcHHHHHH----------HhCcchHHHHHHHHHHHHHHHHHHHhc---CceeccCChhheeEcCC
Confidence 8999999999999999998 346799999999999999999999977 99999999999999999
Q ss_pred CceEEeecccceecCCCCCc---------ccc--ccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccc
Q 039533 778 MTARVGDFGLARILSPDHTQ---------TSS--FSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIM 846 (949)
Q Consensus 778 ~~~kl~DfG~a~~~~~~~~~---------~~~--~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~ 846 (949)
|++||+|||.|+.+.+.... ... ..++||..|.+||++.+...++.+|||+|||++|+|+.|++||...
T Consensus 211 mhikITDFGsAK~l~~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~ 290 (604)
T KOG0592|consen 211 GHIKITDFGSAKILSPSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAA 290 (604)
T ss_pred CcEEEeeccccccCChhhccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccc
Confidence 99999999999988654321 111 3578999999999999999999999999999999999999999643
Q ss_pred cccCchhhhhccccCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 039533 847 FEGDINLHNFGRKALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVH 926 (949)
Q Consensus 847 ~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 926 (949)
.+- .. +.++++-. ++.+...++.+.+|+.+.+..||.+|+|++|+.+
T Consensus 291 Ney----li---------FqkI~~l~--------------------y~fp~~fp~~a~dLv~KLLv~dp~~Rlt~~qIk~ 337 (604)
T KOG0592|consen 291 NEY----LI---------FQKIQALD--------------------YEFPEGFPEDARDLIKKLLVRDPSDRLTSQQIKA 337 (604)
T ss_pred cHH----HH---------HHHHHHhc--------------------ccCCCCCCHHHHHHHHHHHccCccccccHHHHhh
Confidence 211 00 01111100 0011123456788999999999999999977754
No 15
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=1.9e-41 Score=381.58 Aligned_cols=269 Identities=25% Similarity=0.403 Sum_probs=218.8
Q ss_pred cCCCCCCeeeeecCceEEEEEEcC-----CCEEEEEEEEecCCCc-chHHHHHHHHHHHhcCCCcceeEEeeeecccccC
Q 039533 626 SGFSSANLVGVGSFGSVYKGIIDE-----GRTTIAVKVFNLQHHG-ASRSFIAECKALKSIRHRNLVKVLTACLGADYRG 699 (949)
Q Consensus 626 ~~y~~~~~lg~G~~g~Vy~~~~~~-----~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 699 (949)
.+-...+.||+|.||.||+|+... +...||||.++..... ...+|++|++.+..++|||||+++|+|.+.+
T Consensus 486 ~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~~--- 562 (774)
T KOG1026|consen 486 SDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVCREGD--- 562 (774)
T ss_pred hheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEccCC---
Confidence 344566889999999999998742 3467999999876665 6689999999999999999999999998776
Q ss_pred CccceeEeeeccCCChhhhcCCCCCCCcccc----CCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeec
Q 039533 700 NDFKASVYEFMHYGSLEEWLHPFTGEDEIDE----APRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLD 775 (949)
Q Consensus 700 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~----~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~ 775 (949)
..++|+|||..|||.+||.-......... .+..++..+.+.||.|||.|++||-++ .+|||||..+|+||.
T Consensus 563 --P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~---~FVHRDLATRNCLVg 637 (774)
T KOG1026|consen 563 --PLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSH---HFVHRDLATRNCLVG 637 (774)
T ss_pred --eeEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhC---cccccchhhhhceec
Confidence 78999999999999999975443322221 245599999999999999999999988 799999999999999
Q ss_pred CCCceEEeecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHh-CCCCCccccccCchhh
Q 039533 776 DYMTARVGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVI-GKKPIDIMFEGDINLH 854 (949)
Q Consensus 776 ~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~ellt-g~~Pf~~~~~~~~~~~ 854 (949)
++..|||+|||+++.....+.+.......-..+|||||.+..++++++||||||||+|||+++ |+.||.....++
T Consensus 638 e~l~VKIsDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn~E---- 713 (774)
T KOG1026|consen 638 ENLVVKISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLSNQE---- 713 (774)
T ss_pred cceEEEecccccchhhhhhhhhcccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccchHH----
Confidence 999999999999997655444332222234679999999999999999999999999999998 999986443221
Q ss_pred hhccccCCCchhhhc-ccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHHhHH
Q 039533 855 NFGRKALPDDVMDIV-DSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHELQSIKN 933 (949)
Q Consensus 855 ~~~~~~~~~~~~~~~-d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~~ 933 (949)
+.+.+ +..+ ++.++.||.++++++..||+..|++||+++||...|+...+
T Consensus 714 ----------VIe~i~~g~l-------------------L~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L~~~~~ 764 (774)
T KOG1026|consen 714 ----------VIECIRAGQL-------------------LSCPENCPTEVYSLMLECWNENPKRRPSFKEIHSRLQAWAQ 764 (774)
T ss_pred ----------HHHHHHcCCc-------------------ccCCCCCCHHHHHHHHHHhhcCcccCCCHHHHHHHHHHHHh
Confidence 11111 1122 22335889999999999999999999999999999998765
Q ss_pred hh
Q 039533 934 IL 935 (949)
Q Consensus 934 ~~ 935 (949)
.-
T Consensus 765 ~s 766 (774)
T KOG1026|consen 765 AS 766 (774)
T ss_pred cC
Confidence 53
No 16
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=100.00 E-value=4.1e-45 Score=372.66 Aligned_cols=448 Identities=27% Similarity=0.418 Sum_probs=382.9
Q ss_pred EEEEEcCCCCCCccccCCCCCCCCCceeeccCceeccccCCcccCcccCcEEeeccccccCcCCCCCCCCccceeecCCC
Q 039533 67 VTLLDLRSLKLAGSVSHFIGNLSFLKQLYLQVNSFTHEIPSEIGGLRRLKVLALNNNSICGEIPTNISRCSTLIPIHPQN 146 (949)
Q Consensus 67 v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~ 146 (949)
...+++++|.+. .+.+.+.+|..|+.|++++|+++ ..|++++.+..++.|+.|+|+++ ++|+.++.+.+|+.|+.++
T Consensus 47 l~~lils~N~l~-~l~~dl~nL~~l~vl~~~~n~l~-~lp~aig~l~~l~~l~vs~n~ls-~lp~~i~s~~~l~~l~~s~ 123 (565)
T KOG0472|consen 47 LQKLILSHNDLE-VLREDLKNLACLTVLNVHDNKLS-QLPAAIGELEALKSLNVSHNKLS-ELPEQIGSLISLVKLDCSS 123 (565)
T ss_pred hhhhhhccCchh-hccHhhhcccceeEEEeccchhh-hCCHHHHHHHHHHHhhcccchHh-hccHHHhhhhhhhhhhccc
Confidence 567889999988 67778899999999999999998 88999999999999999999998 9999999999999999999
Q ss_pred ccccccccccccCCCCCcEEECCCCCCCCCCCCCcCCCCCccEEeccccccCCCCCCcccCCCccccccccCcccccccc
Q 039533 147 NQLVGKILSRFSSLSKTEILNLGSNHLTGSIPSSLGNLSSIHTISLAYNNLDGTIPNSFGWFENLVFLSLAANNLSVVEN 226 (949)
Q Consensus 147 n~l~~~~~~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~ 226 (949)
|.+. ..++.++.+..|+.|+..+|+++ ..|+.++++.+|..|++.+|+++...|+.+. ++.|++||+..|-++.+|
T Consensus 124 n~~~-el~~~i~~~~~l~dl~~~~N~i~-slp~~~~~~~~l~~l~~~~n~l~~l~~~~i~-m~~L~~ld~~~N~L~tlP- 199 (565)
T KOG0472|consen 124 NELK-ELPDSIGRLLDLEDLDATNNQIS-SLPEDMVNLSKLSKLDLEGNKLKALPENHIA-MKRLKHLDCNSNLLETLP- 199 (565)
T ss_pred ccee-ecCchHHHHhhhhhhhccccccc-cCchHHHHHHHHHHhhccccchhhCCHHHHH-HHHHHhcccchhhhhcCC-
Confidence 9997 45667778889999999999999 8899999999999999999999966665555 999999999998877655
Q ss_pred cccCCCCChhhhccccccccccCCCCCCCCCCcchhccccccCcccEEEccCCCCCccCCchhh-cccccccEEEccCcc
Q 039533 227 KLTGEVPSLEKLQRLQHFTITSNSLGSGGNDDLSFLCSLTNATRLTWMHINSNNFGGLLPGCIS-NLSKTIKTLFLNNNK 305 (949)
Q Consensus 227 ~l~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~~~~L~~L~L~~N~l~~~~p~~~~-~l~~~L~~L~L~~N~ 305 (949)
|.++.+.+|..|+|..|.+. ++++|.++..|.+++++.|++. .+|.... ++ .++.+|||.+|+
T Consensus 200 ------~~lg~l~~L~~LyL~~Nki~--------~lPef~gcs~L~Elh~g~N~i~-~lpae~~~~L-~~l~vLDLRdNk 263 (565)
T KOG0472|consen 200 ------PELGGLESLELLYLRRNKIR--------FLPEFPGCSLLKELHVGENQIE-MLPAEHLKHL-NSLLVLDLRDNK 263 (565)
T ss_pred ------hhhcchhhhHHHHhhhcccc--------cCCCCCccHHHHHHHhcccHHH-hhHHHHhccc-ccceeeeccccc
Confidence 45788899999999999886 4557889999999999999998 4565555 55 569999999999
Q ss_pred ccCCCCCCCCCCCcccEEEeecceecccCCCcccccCCCCEEecCCcccccc----------------------------
Q 039533 306 IYGSIPAGIGNFVNLQRLDMWNNQLSGTIPPAIGELQNLKILGLNRNKLSGN---------------------------- 357 (949)
Q Consensus 306 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~---------------------------- 357 (949)
++ ..|+.+..+++|.+||+|+|.|+ ..|.+++++ +|+.|-|.+|.+..+
T Consensus 264 lk-e~Pde~clLrsL~rLDlSNN~is-~Lp~sLgnl-hL~~L~leGNPlrTiRr~ii~~gT~~vLKyLrs~~~~dglS~s 340 (565)
T KOG0472|consen 264 LK-EVPDEICLLRSLERLDLSNNDIS-SLPYSLGNL-HLKFLALEGNPLRTIRREIISKGTQEVLKYLRSKIKDDGLSQS 340 (565)
T ss_pred cc-cCchHHHHhhhhhhhcccCCccc-cCCcccccc-eeeehhhcCCchHHHHHHHHcccHHHHHHHHHHhhccCCCCCC
Confidence 99 78999999999999999999999 688899999 999999999988621
Q ss_pred ----------cCc---ccccccccceeecccccccccCCCCCCCCCC---CcEEEeeCccccCCCCCcccCCcccceeec
Q 039533 358 ----------IPP---SIGNLKMLLNLFLNDNFLEVSIPSSLGQCES---LIEINLSNNNLSGTIPPQFFSLSSLSISLD 421 (949)
Q Consensus 358 ----------~p~---~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~---L~~L~l~~N~l~~~~p~~~~~l~~l~~~L~ 421 (949)
.+. ....+.+.+.|++++-+++ .+|+....-.. ...++++.|++. ++|..+..+..+...+.
T Consensus 341 e~~~e~~~t~~~~~~~~~~~~i~tkiL~~s~~qlt-~VPdEVfea~~~~~Vt~VnfskNqL~-elPk~L~~lkelvT~l~ 418 (565)
T KOG0472|consen 341 EGGTETAMTLPSESFPDIYAIITTKILDVSDKQLT-LVPDEVFEAAKSEIVTSVNFSKNQLC-ELPKRLVELKELVTDLV 418 (565)
T ss_pred cccccccCCCCCCcccchhhhhhhhhhcccccccc-cCCHHHHHHhhhcceEEEecccchHh-hhhhhhHHHHHHHHHHH
Confidence 011 1123445677888888887 56665444333 778999999998 89999988888877788
Q ss_pred cCCCccCCCCccccccccccceeeeccccccccCCcccccccchhhcccCccccccccCCCcCCCCCCCEEECCCCcCCC
Q 039533 422 WSRNKLTGSLPIEVGKLKILEFLYVYENRLEGEIPSTFGNCIRLEQLGMGGNLFQGPISSSLGSLRGLRVLDLSQNNLSG 501 (949)
Q Consensus 422 ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 501 (949)
+++|.++ -+|..+..+++|..|+|++|-+. .+|.+++.+..|+.||+|+|+|. .+|..+..+..|+.+-.++|++..
T Consensus 419 lsnn~is-fv~~~l~~l~kLt~L~L~NN~Ln-~LP~e~~~lv~Lq~LnlS~NrFr-~lP~~~y~lq~lEtllas~nqi~~ 495 (565)
T KOG0472|consen 419 LSNNKIS-FVPLELSQLQKLTFLDLSNNLLN-DLPEEMGSLVRLQTLNLSFNRFR-MLPECLYELQTLETLLASNNQIGS 495 (565)
T ss_pred hhcCccc-cchHHHHhhhcceeeecccchhh-hcchhhhhhhhhheecccccccc-cchHHHhhHHHHHHHHhccccccc
Confidence 8888887 88889999999999999999998 89999999999999999999998 788888888888888888899987
Q ss_pred cCcccccCCc-cceEeCCCCcCcCcccccccccccccccccCCCC
Q 039533 502 EIPKFLAGLS-LNNLNLSYNDLEGMVTTEGVFKNASATRILGNSK 545 (949)
Q Consensus 502 ~~p~~~~~~~-L~~l~ls~N~l~~~~~~~~~~~~~~~~~~~gn~~ 545 (949)
..|..+..+. |..|||.+|.+..++|..+...++..+.+.|||.
T Consensus 496 vd~~~l~nm~nL~tLDL~nNdlq~IPp~LgnmtnL~hLeL~gNpf 540 (565)
T KOG0472|consen 496 VDPSGLKNMRNLTTLDLQNNDLQQIPPILGNMTNLRHLELDGNPF 540 (565)
T ss_pred cChHHhhhhhhcceeccCCCchhhCChhhccccceeEEEecCCcc
Confidence 6666677776 9999999999999988888888899999999974
No 17
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=9e-41 Score=352.20 Aligned_cols=277 Identities=23% Similarity=0.286 Sum_probs=207.7
Q ss_pred cCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCC--CcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCccc
Q 039533 626 SGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQH--HGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFK 703 (949)
Q Consensus 626 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 703 (949)
+.|+.+++||+|.||.||+|++..+|+.||+|+++... .+-.....+||.+|++++||||+++.+...+. .....
T Consensus 117 ~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~---~~~si 193 (560)
T KOG0600|consen 117 DSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSK---LSGSI 193 (560)
T ss_pred HHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEec---CCceE
Confidence 45677789999999999999999999999999998665 34456778999999999999999999987654 23478
Q ss_pred eeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEe
Q 039533 704 ASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVG 783 (949)
Q Consensus 704 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~ 783 (949)
|+|+|||++ +|..++.. ..-.+++.++..++.|++.||+|+|++ +|+|||||.+|||||.+|.+||+
T Consensus 194 YlVFeYMdh-DL~GLl~~---------p~vkft~~qIKc~mkQLl~Gl~~cH~~---gvlHRDIK~SNiLidn~G~LKia 260 (560)
T KOG0600|consen 194 YLVFEYMDH-DLSGLLSS---------PGVKFTEPQIKCYMKQLLEGLEYCHSR---GVLHRDIKGSNILIDNNGVLKIA 260 (560)
T ss_pred EEEEecccc-hhhhhhcC---------CCcccChHHHHHHHHHHHHHHHHHhhc---CeeeccccccceEEcCCCCEEec
Confidence 999999987 88888762 345689999999999999999999977 99999999999999999999999
Q ss_pred ecccceecCCCCCccccccccCccCccCccccCCC-ccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhc---cc
Q 039533 784 DFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGC-EVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFG---RK 859 (949)
Q Consensus 784 DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~---~~ 859 (949)
|||+|+++....... .+..+-|..|+|||.+.|. .|+.++|+||.|||+.||++|++.|+...+-+. +.... ..
T Consensus 261 DFGLAr~y~~~~~~~-~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQ-l~kIfklcGS 338 (560)
T KOG0600|consen 261 DFGLARFYTPSGSAP-YTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQ-LHKIFKLCGS 338 (560)
T ss_pred cccceeeccCCCCcc-cccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHHH-HHHHHHHhCC
Confidence 999999887766543 2356689999999998876 699999999999999999999999864432211 11100 00
Q ss_pred cCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 039533 860 ALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVH 926 (949)
Q Consensus 860 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 926 (949)
.-.+.+. .. .+.. ............. ..+.....+....+++..++..||.+|.||.++++
T Consensus 339 P~e~~W~-~~--kLP~--~~~~kp~~~y~r~-l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~ 399 (560)
T KOG0600|consen 339 PTEDYWP-VS--KLPH--ATIFKPQQPYKRR-LRETFKDFPASALDLLEKLLSLDPDKRGTASSALQ 399 (560)
T ss_pred CChhccc-cc--cCCc--ccccCCCCcccch-HHHHhccCCHHHHHHHHHHhccCccccccHHHHhc
Confidence 0000011 00 0000 0000000000000 01112344567789999999999999999998875
No 18
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=7.2e-41 Score=351.25 Aligned_cols=262 Identities=28% Similarity=0.380 Sum_probs=203.9
Q ss_pred hcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCCcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCccce
Q 039533 625 TSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFKA 704 (949)
Q Consensus 625 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 704 (949)
..+|...+.||+|+||+||++....+|+..|||.+........+.+.+|+.+|++++|||||+++|.....+ . ..++
T Consensus 16 ~~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~--~-~~~~ 92 (313)
T KOG0198|consen 16 ISNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLNHPNIVQYYGSSSSRE--N-DEYN 92 (313)
T ss_pred cchhhhhccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCCCCCEEeeCCcccccc--C-eeeE
Confidence 456788899999999999999999889999999997654333567899999999999999999998633222 1 3589
Q ss_pred eEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecC-CCceEEe
Q 039533 705 SVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDD-YMTARVG 783 (949)
Q Consensus 705 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~-~~~~kl~ 783 (949)
+.|||+++|+|.+++... +..+++..++.++.||++||+|||++ |||||||||+|||++. ++.+||+
T Consensus 93 i~mEy~~~GsL~~~~~~~---------g~~l~E~~v~~ytr~iL~GL~ylHs~---g~vH~DiK~~NiLl~~~~~~~Kla 160 (313)
T KOG0198|consen 93 IFMEYAPGGSLSDLIKRY---------GGKLPEPLVRRYTRQILEGLAYLHSK---GIVHCDIKPANILLDPSNGDVKLA 160 (313)
T ss_pred eeeeccCCCcHHHHHHHc---------CCCCCHHHHHHHHHHHHHHHHHHHhC---CEeccCcccceEEEeCCCCeEEec
Confidence 999999999999999732 12599999999999999999999987 9999999999999999 7999999
Q ss_pred ecccceecCCCCC-ccccccccCccCccCccccCCC-ccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhccccC
Q 039533 784 DFGLARILSPDHT-QTSSFSVKGSLGYIAPEYGVGC-EVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKAL 861 (949)
Q Consensus 784 DfG~a~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~ 861 (949)
|||+++....... ........||+.|||||++.++ ....++||||+||++.||+||++||...........
T Consensus 161 DFG~a~~~~~~~~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~~~~~~~~~------- 233 (313)
T KOG0198|consen 161 DFGLAKKLESKGTKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEFFEEAEALL------- 233 (313)
T ss_pred cCccccccccccccccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhhcchHHHHH-------
Confidence 9999987664111 2223356799999999999953 344699999999999999999999964311100000
Q ss_pred CCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHHh
Q 039533 862 PDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHELQSI 931 (949)
Q Consensus 862 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i 931 (949)
.+......+. .+...+....+++.+|+..+|++||||+|+++.--..
T Consensus 234 -----~ig~~~~~P~------------------ip~~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~hpf~~ 280 (313)
T KOG0198|consen 234 -----LIGREDSLPE------------------IPDSLSDEAKDFLRKCFKRDPEKRPTAEELLEHPFLK 280 (313)
T ss_pred -----HHhccCCCCC------------------CCcccCHHHHHHHHHHhhcCcccCcCHHHHhhChhhh
Confidence 0000000000 0113455678999999999999999999998865543
No 19
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-40 Score=357.39 Aligned_cols=250 Identities=21% Similarity=0.314 Sum_probs=209.1
Q ss_pred cCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCCcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCcccee
Q 039533 626 SGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFKAS 705 (949)
Q Consensus 626 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 705 (949)
..|..-++||+|+.|.||.|....+++.||||++........+-+.+|+.+|+..+|+|||++++.|... +..++
T Consensus 273 ~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~-----deLWV 347 (550)
T KOG0578|consen 273 SKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPNIVNFLDSYLVG-----DELWV 347 (550)
T ss_pred hhhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhccchHHHHHHHHhccc-----ceeEE
Confidence 3577778999999999999999999999999999887777777899999999999999999999886544 48999
Q ss_pred EeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEeec
Q 039533 706 VYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVGDF 785 (949)
Q Consensus 706 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~Df 785 (949)
|||||+||+|.+.+. ...+++.++..|++++++||+|||.+ +|+|||||.+|||++.+|.+||+||
T Consensus 348 VMEym~ggsLTDvVt-----------~~~~~E~qIA~Icre~l~aL~fLH~~---gIiHrDIKSDnILL~~~g~vKltDF 413 (550)
T KOG0578|consen 348 VMEYMEGGSLTDVVT-----------KTRMTEGQIAAICREILQGLKFLHAR---GIIHRDIKSDNILLTMDGSVKLTDF 413 (550)
T ss_pred EEeecCCCchhhhhh-----------cccccHHHHHHHHHHHHHHHHHHHhc---ceeeeccccceeEeccCCcEEEeee
Confidence 999999999999986 24489999999999999999999988 9999999999999999999999999
Q ss_pred ccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhccccCCCch
Q 039533 786 GLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKALPDDV 865 (949)
Q Consensus 786 G~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~ 865 (949)
|++..+....... ...+||+.|||||+.....|++|+||||||++++||+-|++||-.... +..
T Consensus 414 GFcaqi~~~~~KR--~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~P----lrA---------- 477 (550)
T KOG0578|consen 414 GFCAQISEEQSKR--STMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNENP----LRA---------- 477 (550)
T ss_pred eeeeccccccCcc--ccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCCCh----HHH----------
Confidence 9999887766533 257899999999999999999999999999999999999999842100 000
Q ss_pred hhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 039533 866 MDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVH 926 (949)
Q Consensus 866 ~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 926 (949)
.-++..... ..+.........+.+++.+|++.||++||+|.|+++
T Consensus 478 lyLIa~ng~----------------P~lk~~~klS~~~kdFL~~cL~~dv~~RasA~eLL~ 522 (550)
T KOG0578|consen 478 LYLIATNGT----------------PKLKNPEKLSPELKDFLDRCLVVDVEQRASAKELLE 522 (550)
T ss_pred HHHHhhcCC----------------CCcCCccccCHHHHHHHHHHhhcchhcCCCHHHHhc
Confidence 000000000 011122345677899999999999999999999976
No 20
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=5.8e-41 Score=322.68 Aligned_cols=272 Identities=18% Similarity=0.233 Sum_probs=220.6
Q ss_pred HhcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCCcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCccc
Q 039533 624 ATSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFK 703 (949)
Q Consensus 624 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 703 (949)
..++|++.+.+|+|||+.||.++.-.+++.+|+|++.....+..+..++|++..++++|||++++++++....-++....
T Consensus 19 n~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~~~ 98 (302)
T KOG2345|consen 19 NNKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKHEA 98 (302)
T ss_pred cCceEEEeeeecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCceeE
Confidence 45689999999999999999999988999999999988877778899999999999999999999999887766677789
Q ss_pred eeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEe
Q 039533 704 ASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVG 783 (949)
Q Consensus 704 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~ 783 (949)
|++++|...|+|.+.+...+ ..+..+++.+.++|+.++++||++||+. .++++||||||.||++.+++.+++.
T Consensus 99 yll~Pyy~~Gsl~d~i~~~k------~kg~~~sE~~iL~if~gic~gL~~lH~~-~~~yAH~DiKP~NILls~~~~~vl~ 171 (302)
T KOG2345|consen 99 YLLLPYYKRGSLLDEIERLK------IKGNFVSEAQILWIFLGICRGLEALHEK-EPPYAHRDIKPANILLSDSGLPVLM 171 (302)
T ss_pred EEEeehhccccHHHHHHHHh------hcCCccCHHHHHHHHHHHHHHHHHHhcc-CCcccccCCCcceeEecCCCceEEE
Confidence 99999999999999997432 2345689999999999999999999988 5679999999999999999999999
Q ss_pred ecccceecCCCCC-------ccccccccCccCccCccccC---CCccCCccchHHHHHHHHHHHhCCCCCccccccCchh
Q 039533 784 DFGLARILSPDHT-------QTSSFSVKGSLGYIAPEYGV---GCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINL 853 (949)
Q Consensus 784 DfG~a~~~~~~~~-------~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~ 853 (949)
|||.++...-... ........+|..|+|||.+. +...++++|||||||++|+|+.|..||+...+....+
T Consensus 172 D~GS~~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~~GgSl 251 (302)
T KOG2345|consen 172 DLGSATQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQQGGSL 251 (302)
T ss_pred eccCccccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhhcCCeE
Confidence 9999976532211 11112345899999999865 4568899999999999999999999998654432222
Q ss_pred hhhccccCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHHh
Q 039533 854 HNFGRKALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHELQSI 931 (949)
Q Consensus 854 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i 931 (949)
.-.+ ..... .++.-...++.+.+++.+|++.||.+||++.|++..++.+
T Consensus 252 aLAv-----------~n~q~------------------s~P~~~~yse~l~~lik~mlqvdP~qRP~i~~ll~~~d~L 300 (302)
T KOG2345|consen 252 ALAV-----------QNAQI------------------SIPNSSRYSEALHQLIKSMLQVDPNQRPTIPELLSKLDDL 300 (302)
T ss_pred EEee-----------ecccc------------------ccCCCCCccHHHHHHHHHHhcCCcccCCCHHHHHHHHHhh
Confidence 1110 01000 0111112467789999999999999999999999998865
No 21
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.9e-41 Score=353.25 Aligned_cols=272 Identities=21% Similarity=0.240 Sum_probs=208.8
Q ss_pred HhcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCCcch-HHHHHHHHHHHhcC-CCcceeEEeeeecccccCCc
Q 039533 624 ATSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHGAS-RSFIAECKALKSIR-HRNLVKVLTACLGADYRGND 701 (949)
Q Consensus 624 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~-~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~~ 701 (949)
..++|.+.++||.|.||.||+|+...++..||||.++..-.... -.-.+|+..|++++ ||||+++.+++.+.+ .
T Consensus 8 ~m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~hpniikL~Evi~d~~----~ 83 (538)
T KOG0661|consen 8 FMDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNPHPNIIKLKEVIRDND----R 83 (538)
T ss_pred HHHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcCCCCcchhhHHHhhccC----c
Confidence 34678999999999999999999999999999999975544332 23468999999998 999999999875443 2
Q ss_pred cceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceE
Q 039533 702 FKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTAR 781 (949)
Q Consensus 702 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~k 781 (949)
..++|||||+. +|++.++. .++.+++.+++.|+.||++||+|+|.+ |+.|||+||+|||+.....+|
T Consensus 84 ~L~fVfE~Md~-NLYqLmK~---------R~r~fse~~irnim~QilqGL~hiHk~---GfFHRDlKPENiLi~~~~~iK 150 (538)
T KOG0661|consen 84 ILYFVFEFMDC-NLYQLMKD---------RNRLFSESDIRNIMYQILQGLAHIHKH---GFFHRDLKPENILISGNDVIK 150 (538)
T ss_pred eEeeeHHhhhh-hHHHHHhh---------cCCcCCHHHHHHHHHHHHHHHHHHHhc---CcccccCChhheEecccceeE
Confidence 78999999975 99999972 357799999999999999999999977 999999999999999889999
Q ss_pred EeecccceecCCCCCccccccccCccCccCccccC-CCccCCccchHHHHHHHHHHHhCCCCCccccccCchhh--hhcc
Q 039533 782 VGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGV-GCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLH--NFGR 858 (949)
Q Consensus 782 l~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~--~~~~ 858 (949)
|+|||+|+.+......+ ..+.|..|+|||++. .+.|+.+.||||+|||++|+.+-++.|....+.|..+. +...
T Consensus 151 iaDFGLARev~SkpPYT---eYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~VLG 227 (538)
T KOG0661|consen 151 IADFGLAREVRSKPPYT---EYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICEVLG 227 (538)
T ss_pred ecccccccccccCCCcc---hhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHhC
Confidence 99999999887665544 456899999999866 45689999999999999999999999875544332111 1111
Q ss_pred ----ccCCCc--hhhhcccCCCCCchhhhhhhchhhhhhhh-hhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHH
Q 039533 859 ----KALPDD--VMDIVDSSLLPDDEDLILTGNQRQKQARI-NSIIECLISMVRIGVACSMELPQDRTNMTNVVHE 927 (949)
Q Consensus 859 ----~~~~~~--~~~~~d~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 927 (949)
..+++. +...+.-.+..... ..+ .-...+..+..+++.+|+++||++||||+|.++.
T Consensus 228 tP~~~~~~eg~~La~~mnf~~P~~~~------------~~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~~ 291 (538)
T KOG0661|consen 228 TPDKDSWPEGYNLASAMNFRFPQVKP------------SPLKDLLPNASSEAASLIERLLAWDPDKRPTASQALQH 291 (538)
T ss_pred CCccccchhHHHHHHHhccCCCcCCC------------CChHHhCcccCHHHHHHHHHHhcCCCccCccHHHHhcC
Confidence 111110 11111111111100 000 0112356678999999999999999999998863
No 22
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-41 Score=361.70 Aligned_cols=366 Identities=22% Similarity=0.236 Sum_probs=317.2
Q ss_pred eeecCCCccccccccccccCCCCCcEEECCCCCCCCCCCCCcCCCCCccEEeccccccCCCCCCcccCCCccccccccCc
Q 039533 140 IPIHPQNNQLVGKILSRFSSLSKTEILNLGSNHLTGSIPSSLGNLSSIHTISLAYNNLDGTIPNSFGWFENLVFLSLAAN 219 (949)
Q Consensus 140 ~~L~l~~n~l~~~~~~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N 219 (949)
+.||+++|++..+.+..|.+|++|++++|.+|.++ .+|...+...+|+.|+|.+|.|+..-.+++..++.|+.||||.|
T Consensus 81 ~~LdlsnNkl~~id~~~f~nl~nLq~v~l~~N~Lt-~IP~f~~~sghl~~L~L~~N~I~sv~se~L~~l~alrslDLSrN 159 (873)
T KOG4194|consen 81 QTLDLSNNKLSHIDFEFFYNLPNLQEVNLNKNELT-RIPRFGHESGHLEKLDLRHNLISSVTSEELSALPALRSLDLSRN 159 (873)
T ss_pred eeeeccccccccCcHHHHhcCCcceeeeeccchhh-hcccccccccceeEEeeeccccccccHHHHHhHhhhhhhhhhhc
Confidence 45777777777777788888888888888888888 78876666667999999999988777788888889999999999
Q ss_pred ccccccccccCCCCChhhhccccccccccCCCCCCCCCCcchhccccccCcccEEEccCCCCCccCCchhhcccccccEE
Q 039533 220 NLSVVENKLTGEVPSLEKLQRLQHFTITSNSLGSGGNDDLSFLCSLTNATRLTWMHINSNNFGGLLPGCISNLSKTIKTL 299 (949)
Q Consensus 220 ~l~~~~~~l~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~~~~L~~L~L~~N~l~~~~p~~~~~l~~~L~~L 299 (949)
.|+.++. |++..-.++++|+|++|+|+..+.+ +|.++.+|..|.|++|+++...+..|.+++ .|+.|
T Consensus 160 ~is~i~~------~sfp~~~ni~~L~La~N~It~l~~~------~F~~lnsL~tlkLsrNrittLp~r~Fk~L~-~L~~L 226 (873)
T KOG4194|consen 160 LISEIPK------PSFPAKVNIKKLNLASNRITTLETG------HFDSLNSLLTLKLSRNRITTLPQRSFKRLP-KLESL 226 (873)
T ss_pred hhhcccC------CCCCCCCCceEEeeccccccccccc------cccccchheeeecccCcccccCHHHhhhcc-hhhhh
Confidence 9888764 3444556788889999998876654 456677899999999999988778888886 59999
Q ss_pred EccCccccCCCCCCCCCCCcccEEEeecceecccCCCcccccCCCCEEecCCcccccccCcccccccccceeeccccccc
Q 039533 300 FLNNNKIYGSIPAGIGNFVNLQRLDMWNNQLSGTIPPAIGELQNLKILGLNRNKLSGNIPPSIGNLKMLLNLFLNDNFLE 379 (949)
Q Consensus 300 ~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 379 (949)
+|..|+|.-.---.|.++++|+.|.|..|.|+..-...|..+.++++|+|+.|+++..-..++.+|++|+.|+|++|.|.
T Consensus 227 dLnrN~irive~ltFqgL~Sl~nlklqrN~I~kL~DG~Fy~l~kme~l~L~~N~l~~vn~g~lfgLt~L~~L~lS~NaI~ 306 (873)
T KOG4194|consen 227 DLNRNRIRIVEGLTFQGLPSLQNLKLQRNDISKLDDGAFYGLEKMEHLNLETNRLQAVNEGWLFGLTSLEQLDLSYNAIQ 306 (873)
T ss_pred hccccceeeehhhhhcCchhhhhhhhhhcCcccccCcceeeecccceeecccchhhhhhcccccccchhhhhccchhhhh
Confidence 99999998444667999999999999999999888889999999999999999999888899999999999999999999
Q ss_pred ccCCCCCCCCCCCcEEEeeCccccCCCCCcccCCcccceeeccCCCccCCCCccccccccccceeeeccccccccCCc--
Q 039533 380 VSIPSSLGQCESLIEINLSNNNLSGTIPPQFFSLSSLSISLDWSRNKLTGSLPIEVGKLKILEFLYVYENRLEGEIPS-- 457 (949)
Q Consensus 380 ~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~l~~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-- 457 (949)
.+.+++...+++|++|+|++|+|+..-+..|..+..| +.|+|++|.++..-...|..+++|+.|||++|.|++.+.+
T Consensus 307 rih~d~WsftqkL~~LdLs~N~i~~l~~~sf~~L~~L-e~LnLs~Nsi~~l~e~af~~lssL~~LdLr~N~ls~~IEDaa 385 (873)
T KOG4194|consen 307 RIHIDSWSFTQKLKELDLSSNRITRLDEGSFRVLSQL-EELNLSHNSIDHLAEGAFVGLSSLHKLDLRSNELSWCIEDAA 385 (873)
T ss_pred eeecchhhhcccceeEeccccccccCChhHHHHHHHh-hhhcccccchHHHHhhHHHHhhhhhhhcCcCCeEEEEEecch
Confidence 9999999999999999999999996667777778887 8899999999987788899999999999999999987764
Q ss_pred -ccccccchhhcccCccccccccCCCcCCCCCCCEEECCCCcCCCcCcccccCCccceEeCCCC
Q 039533 458 -TFGNCIRLEQLGMGGNLFQGPISSSLGSLRGLRVLDLSQNNLSGEIPKFLAGLSLNNLNLSYN 520 (949)
Q Consensus 458 -~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~l~ls~N 520 (949)
.|.+|++|+.|+|.+|+|..+.-.+|.++++|+.|||.+|.|...-|+.|..+.|++|-+..-
T Consensus 386 ~~f~gl~~LrkL~l~gNqlk~I~krAfsgl~~LE~LdL~~NaiaSIq~nAFe~m~Lk~Lv~nSs 449 (873)
T KOG4194|consen 386 VAFNGLPSLRKLRLTGNQLKSIPKRAFSGLEALEHLDLGDNAIASIQPNAFEPMELKELVMNSS 449 (873)
T ss_pred hhhccchhhhheeecCceeeecchhhhccCcccceecCCCCcceeecccccccchhhhhhhccc
Confidence 578899999999999999987778999999999999999999988899999888888776543
No 23
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=100.00 E-value=2.2e-41 Score=359.95 Aligned_cols=390 Identities=21% Similarity=0.240 Sum_probs=312.3
Q ss_pred EEEEcCCCCCCccccCCCCC-C-CCCceeeccCceeccccCCcccCcccCcEEeeccccccCcCCCCCCCCccceeecCC
Q 039533 68 TLLDLRSLKLAGSVSHFIGN-L-SFLKQLYLQVNSFTHEIPSEIGGLRRLKVLALNNNSICGEIPTNISRCSTLIPIHPQ 145 (949)
Q Consensus 68 ~~l~l~~~~l~g~~~~~l~~-l-~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~ 145 (949)
..||.++++|...--..+.. | +.-+.|||++|.++..-+..|.++++|+.++|.+|.++ .||...+...+|+.|+|.
T Consensus 55 ~lldcs~~~lea~~~~~l~g~lp~~t~~LdlsnNkl~~id~~~f~nl~nLq~v~l~~N~Lt-~IP~f~~~sghl~~L~L~ 133 (873)
T KOG4194|consen 55 RLLDCSDRELEAIDKSRLKGFLPSQTQTLDLSNNKLSHIDFEFFYNLPNLQEVNLNKNELT-RIPRFGHESGHLEKLDLR 133 (873)
T ss_pred eeeecCccccccccccccCCcCccceeeeeccccccccCcHHHHhcCCcceeeeeccchhh-hcccccccccceeEEeee
Confidence 44666666665432222221 2 34567999999999888889999999999999999998 899888888889999999
Q ss_pred CccccccccccccCCCCCcEEECCCCCCCCCCCCCcCCCCCccEEeccccccCCCCCCcccCCCccccccccCccccccc
Q 039533 146 NNQLVGKILSRFSSLSKTEILNLGSNHLTGSIPSSLGNLSSIHTISLAYNNLDGTIPNSFGWFENLVFLSLAANNLSVVE 225 (949)
Q Consensus 146 ~n~l~~~~~~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 225 (949)
+|.|.....+.++.++.|+.||||.|.|+...-.+|..-.++++|+|++|+|+......|.++.+|..|.|+.|+|+.++
T Consensus 134 ~N~I~sv~se~L~~l~alrslDLSrN~is~i~~~sfp~~~ni~~L~La~N~It~l~~~~F~~lnsL~tlkLsrNrittLp 213 (873)
T KOG4194|consen 134 HNLISSVTSEELSALPALRSLDLSRNLISEIPKPSFPAKVNIKKLNLASNRITTLETGHFDSLNSLLTLKLSRNRITTLP 213 (873)
T ss_pred ccccccccHHHHHhHhhhhhhhhhhchhhcccCCCCCCCCCceEEeeccccccccccccccccchheeeecccCcccccC
Confidence 99999999999999999999999999999555567888889999999999999888899999999999999999998776
Q ss_pred ccccCCCCChhhhccccccccccCCCCCCCCCCcchhccccccCcccEEEccCCCCCccCCchhhcccccccEEEccCcc
Q 039533 226 NKLTGEVPSLEKLQRLQHFTITSNSLGSGGNDDLSFLCSLTNATRLTWMHINSNNFGGLLPGCISNLSKTIKTLFLNNNK 305 (949)
Q Consensus 226 ~~l~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~~~~L~~L~L~~N~l~~~~p~~~~~l~~~L~~L~L~~N~ 305 (949)
.. .+++|++|+.|+|..|+|.-.. ...|.++++|+.|.|..|.+...-.+.|..+. .+++|+|+.|+
T Consensus 214 ~r------~Fk~L~~L~~LdLnrN~irive------~ltFqgL~Sl~nlklqrN~I~kL~DG~Fy~l~-kme~l~L~~N~ 280 (873)
T KOG4194|consen 214 QR------SFKRLPKLESLDLNRNRIRIVE------GLTFQGLPSLQNLKLQRNDISKLDDGAFYGLE-KMEHLNLETNR 280 (873)
T ss_pred HH------Hhhhcchhhhhhccccceeeeh------hhhhcCchhhhhhhhhhcCcccccCcceeeec-ccceeecccch
Confidence 43 4677889999999999987532 23577888899999999999988888888884 59999999999
Q ss_pred ccCCCCCCCCCCCcccEEEeecceecccCCCcccccCCCCEEecCCcccccccCcccccccccceeecccccccccCCCC
Q 039533 306 IYGSIPAGIGNFVNLQRLDMWNNQLSGTIPPAIGELQNLKILGLNRNKLSGNIPPSIGNLKMLLNLFLNDNFLEVSIPSS 385 (949)
Q Consensus 306 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~ 385 (949)
++..-..++.+++.|+.|+||+|.|..+-++++.-.++|++|+|++|+|+...+.+|..|..|++|+|++|+++..-..+
T Consensus 281 l~~vn~g~lfgLt~L~~L~lS~NaI~rih~d~WsftqkL~~LdLs~N~i~~l~~~sf~~L~~Le~LnLs~Nsi~~l~e~a 360 (873)
T KOG4194|consen 281 LQAVNEGWLFGLTSLEQLDLSYNAIQRIHIDSWSFTQKLKELDLSSNRITRLDEGSFRVLSQLEELNLSHNSIDHLAEGA 360 (873)
T ss_pred hhhhhcccccccchhhhhccchhhhheeecchhhhcccceeEeccccccccCChhHHHHHHHhhhhcccccchHHHHhhH
Confidence 99888888999999999999999999888888888999999999999999888888999999999999999999888888
Q ss_pred CCCCCCCcEEEeeCccccCCCCCcccCCcccceeeccCCCccCCCCccccccccccceeeeccccccccCCcccccccch
Q 039533 386 LGQCESLIEINLSNNNLSGTIPPQFFSLSSLSISLDWSRNKLTGSLPIEVGKLKILEFLYVYENRLEGEIPSTFGNCIRL 465 (949)
Q Consensus 386 ~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~l~~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 465 (949)
|..+++|++|||++|.|++.|-+. ...|.+|++|+.|+|.+|+|+.+.-..|.+++.|
T Consensus 361 f~~lssL~~LdLr~N~ls~~IEDa----------------------a~~f~gl~~LrkL~l~gNqlk~I~krAfsgl~~L 418 (873)
T KOG4194|consen 361 FVGLSSLHKLDLRSNELSWCIEDA----------------------AVAFNGLPSLRKLRLTGNQLKSIPKRAFSGLEAL 418 (873)
T ss_pred HHHhhhhhhhcCcCCeEEEEEecc----------------------hhhhccchhhhheeecCceeeecchhhhccCccc
Confidence 999999999999999998655432 1234445555555555555553333455555555
Q ss_pred hhcccCccccccccCCCcCCCCCCCEEEC
Q 039533 466 EQLGMGGNLFQGPISSSLGSLRGLRVLDL 494 (949)
Q Consensus 466 ~~L~l~~N~l~~~~~~~~~~l~~L~~L~L 494 (949)
++|||.+|.|..+-|.+|..+ .|+.|-+
T Consensus 419 E~LdL~~NaiaSIq~nAFe~m-~Lk~Lv~ 446 (873)
T KOG4194|consen 419 EHLDLGDNAIASIQPNAFEPM-ELKELVM 446 (873)
T ss_pred ceecCCCCcceeecccccccc-hhhhhhh
Confidence 555555555555555555555 5555544
No 24
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=9.8e-40 Score=339.15 Aligned_cols=263 Identities=22% Similarity=0.306 Sum_probs=206.8
Q ss_pred hcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCCc-chHHHHHHHHHHHhcCCCcceeEEeeeecccccCCccc
Q 039533 625 TSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHG-ASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFK 703 (949)
Q Consensus 625 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 703 (949)
.++|...++||.|..++||+|+....++.||||++....-. ..+.+++|+..++.++||||++++..|.... ..
T Consensus 25 ~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~-----~L 99 (516)
T KOG0582|consen 25 AKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFVVDS-----EL 99 (516)
T ss_pred ccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEEecc-----ee
Confidence 46799999999999999999999988999999999855433 3488999999999999999999998877555 89
Q ss_pred eeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEe
Q 039533 704 ASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVG 783 (949)
Q Consensus 704 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~ 783 (949)
|+||+||.+|++.+.++.. .+..+++..+..|.+++++||.|||.+ |.||||||+.||||+.+|.+||+
T Consensus 100 WvVmpfMa~GS~ldIik~~--------~~~Gl~E~~Ia~iLre~LkaL~YLH~~---G~IHRdvKAgnILi~~dG~VkLa 168 (516)
T KOG0582|consen 100 WVVMPFMAGGSLLDIIKTY--------YPDGLEEASIATILREVLKALDYLHQN---GHIHRDVKAGNILIDSDGTVKLA 168 (516)
T ss_pred EEeehhhcCCcHHHHHHHH--------ccccccHHHHHHHHHHHHHHHHHHHhc---CceecccccccEEEcCCCcEEEc
Confidence 9999999999999999732 234488999999999999999999977 99999999999999999999999
Q ss_pred ecccceecCCCCC-cccc-ccccCccCccCccccCC--CccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhccc
Q 039533 784 DFGLARILSPDHT-QTSS-FSVKGSLGYIAPEYGVG--CEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRK 859 (949)
Q Consensus 784 DfG~a~~~~~~~~-~~~~-~~~~gt~~y~aPE~~~~--~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~ 859 (949)
|||.+..+..... .... ...+||+.|||||+++. ..|+.|+||||||++..|+.+|..||........-+......
T Consensus 169 dFgvsa~l~~~G~R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkvLl~tLqn~ 248 (516)
T KOG0582|consen 169 DFGVSASLFDSGDRQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMKVLLLTLQND 248 (516)
T ss_pred CceeeeeecccCceeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHHHHHHHhcCC
Confidence 9998876654432 1111 34679999999999543 469999999999999999999999997443322222111110
Q ss_pred cCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 039533 860 ALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVH 926 (949)
Q Consensus 860 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 926 (949)
... .. .... ..++.......+.+++..|++.||.+|||++++++
T Consensus 249 pp~-----~~---t~~~---------------~~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlk 292 (516)
T KOG0582|consen 249 PPT-----LL---TSGL---------------DKDEDKKFSKSFREMIALCLVKDPSKRPTASKLLK 292 (516)
T ss_pred CCC-----cc---cccC---------------ChHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhc
Confidence 000 00 0000 01111233457889999999999999999999875
No 25
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=100.00 E-value=8.3e-40 Score=317.96 Aligned_cols=274 Identities=22% Similarity=0.293 Sum_probs=206.1
Q ss_pred cCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCC--CcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCccc
Q 039533 626 SGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQH--HGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFK 703 (949)
Q Consensus 626 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 703 (949)
.+|...+++|+|.||.||+|++..+|+.||||+++... .+......+|++.|+.++|+||+.++++|...+ ..
T Consensus 2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~-----~l 76 (318)
T KOG0659|consen 2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKS-----NL 76 (318)
T ss_pred chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCC-----ce
Confidence 46888899999999999999999999999999998543 233467889999999999999999999976544 78
Q ss_pred eeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEe
Q 039533 704 ASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVG 783 (949)
Q Consensus 704 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~ 783 (949)
.+|+|||+. +|+..++. ....++..++..++.++.+|++|+|++ .|+||||||.|+|++.+|.+||+
T Consensus 77 ~lVfEfm~t-dLe~vIkd---------~~i~l~pa~iK~y~~m~LkGl~y~H~~---~IlHRDlKPnNLLis~~g~lKiA 143 (318)
T KOG0659|consen 77 SLVFEFMPT-DLEVVIKD---------KNIILSPADIKSYMLMTLKGLAYCHSK---WILHRDLKPNNLLISSDGQLKIA 143 (318)
T ss_pred EEEEEeccc-cHHHHhcc---------cccccCHHHHHHHHHHHHHHHHHHHhh---hhhcccCCccceEEcCCCcEEee
Confidence 999999975 89999872 456789999999999999999999977 89999999999999999999999
Q ss_pred ecccceecCCCCCccccccccCccCccCccccCCC-ccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhcc---c
Q 039533 784 DFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGC-EVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGR---K 859 (949)
Q Consensus 784 DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~---~ 859 (949)
|||+|+.+........ ..+-|..|+|||.+.|. .|+..+||||.|||+.||+-|.+-|....+-+. +....+ .
T Consensus 144 DFGLAr~f~~p~~~~~--~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQ-L~~If~~LGT 220 (318)
T KOG0659|consen 144 DFGLARFFGSPNRIQT--HQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQ-LSKIFRALGT 220 (318)
T ss_pred cccchhccCCCCcccc--cceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchHHH-HHHHHHHcCC
Confidence 9999999886655333 23679999999998886 589999999999999999999987753322211 111111 1
Q ss_pred cCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHH
Q 039533 860 ALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHE 927 (949)
Q Consensus 860 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 927 (949)
..++.+.++ .-.++..+.- .... .........+.....+++..++..||.+|+|++|+++.
T Consensus 221 P~~~~WP~~---~~lpdY~~~~-~~P~---~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~ 281 (318)
T KOG0659|consen 221 PTPDQWPEM---TSLPDYVKIQ-QFPK---PPLNNLFPAASSDALDLLSKMLTYNPKKRITASQALKH 281 (318)
T ss_pred CCcccCccc---cccccHHHHh-cCCC---CccccccccccHHHHHHHHhhhccCchhcccHHHHhcc
Confidence 111111111 0011111000 0000 00000112344556899999999999999999998764
No 26
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-39 Score=339.72 Aligned_cols=265 Identities=21% Similarity=0.265 Sum_probs=206.0
Q ss_pred HHHhcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCC--------------cchHHHHHHHHHHHhcCCCccee
Q 039533 622 YNATSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHH--------------GASRSFIAECKALKSIRHRNLVK 687 (949)
Q Consensus 622 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--------------~~~~~~~~E~~~l~~l~h~niv~ 687 (949)
....+.|++.+.||+|.||.|-+|++..+++.||||++.+... ...++..+|+.+|++++|||||+
T Consensus 93 ~k~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~ 172 (576)
T KOG0585|consen 93 RKQLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVK 172 (576)
T ss_pred ceehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeE
Confidence 3456789999999999999999999999999999999963321 12258899999999999999999
Q ss_pred EEeeeecccccCCccceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCC
Q 039533 688 VLTACLGADYRGNDFKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDL 767 (949)
Q Consensus 688 ~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDl 767 (949)
++++..+.. .+..|+|+|||..|.+.+.-. ....+++.++++|+.+++.||+|||.+ +||||||
T Consensus 173 LiEvLDDP~---s~~~YlVley~s~G~v~w~p~----------d~~els~~~Ar~ylrDvv~GLEYLH~Q---giiHRDI 236 (576)
T KOG0585|consen 173 LIEVLDDPE---SDKLYLVLEYCSKGEVKWCPP----------DKPELSEQQARKYLRDVVLGLEYLHYQ---GIIHRDI 236 (576)
T ss_pred EEEeecCcc---cCceEEEEEeccCCccccCCC----------CcccccHHHHHHHHHHHHHHHHHHHhc---Ceecccc
Confidence 999865443 457999999999887754322 122389999999999999999999988 9999999
Q ss_pred CCCCeeecCCCceEEeecccceecCCCCCc---cccccccCccCccCccccCCCc----cCCccchHHHHHHHHHHHhCC
Q 039533 768 KPSNVLLDDYMTARVGDFGLARILSPDHTQ---TSSFSVKGSLGYIAPEYGVGCE----VSTNGDVYSYGILLLELVIGK 840 (949)
Q Consensus 768 kp~NIll~~~~~~kl~DfG~a~~~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~----~~~~sDiwSlGvvl~elltg~ 840 (949)
||+|+|++++|++||+|||.+......... ..-...+||+.|+|||...++. .+.+.||||+||+||.++.|+
T Consensus 237 KPsNLLl~~~g~VKIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~ 316 (576)
T KOG0585|consen 237 KPSNLLLSSDGTVKISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQ 316 (576)
T ss_pred chhheEEcCCCcEEeeccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhcc
Confidence 999999999999999999999876333211 1111356999999999877632 467899999999999999999
Q ss_pred CCCccccccCchhhhhccccCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCC
Q 039533 841 KPIDIMFEGDINLHNFGRKALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTN 920 (949)
Q Consensus 841 ~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs 920 (949)
.||-..+.. +. ...++...+ .++...++.+.+.+++.+++++||++|.+
T Consensus 317 ~PF~~~~~~-----~l--------~~KIvn~pL------------------~fP~~pe~~e~~kDli~~lL~KdP~~Ri~ 365 (576)
T KOG0585|consen 317 LPFFDDFEL-----EL--------FDKIVNDPL------------------EFPENPEINEDLKDLIKRLLEKDPEQRIT 365 (576)
T ss_pred CCcccchHH-----HH--------HHHHhcCcc------------------cCCCcccccHHHHHHHHHHhhcChhheee
Confidence 999532111 00 111222111 12222355677899999999999999999
Q ss_pred HHHHHHHHHHhHH
Q 039533 921 MTNVVHELQSIKN 933 (949)
Q Consensus 921 ~~ev~~~L~~i~~ 933 (949)
..+|.....--+.
T Consensus 366 l~~ik~Hpwvt~~ 378 (576)
T KOG0585|consen 366 LPDIKLHPWVTRD 378 (576)
T ss_pred hhhheecceeccC
Confidence 9999877655444
No 27
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=100.00 E-value=3.6e-40 Score=349.64 Aligned_cols=247 Identities=28% Similarity=0.377 Sum_probs=205.4
Q ss_pred cCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCC--cchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCccc
Q 039533 626 SGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHH--GASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFK 703 (949)
Q Consensus 626 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 703 (949)
++|.+.+.||+|+||.||+|+.+.+.+.||+|.+.+... .+.+.+.+|++++++++||||+.++++|. ...+.
T Consensus 2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfE-----t~~~~ 76 (808)
T KOG0597|consen 2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFE-----TSAHL 76 (808)
T ss_pred cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhc-----ccceE
Confidence 578899999999999999999999999999999975443 34567999999999999999999999854 44589
Q ss_pred eeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEe
Q 039533 704 ASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVG 783 (949)
Q Consensus 704 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~ 783 (949)
++|+||+.| +|..++. ..+.++++.++.|+.|++.||.|||+. +|.|||+||.||+++..|++|++
T Consensus 77 ~vVte~a~g-~L~~il~----------~d~~lpEe~v~~~a~~LVsaL~yLhs~---rilhrd~kPqniLl~~~~~~Klc 142 (808)
T KOG0597|consen 77 WVVTEYAVG-DLFTILE----------QDGKLPEEQVRAIAYDLVSALYYLHSN---RILHRDMKPQNILLEKGGTLKLC 142 (808)
T ss_pred EEEehhhhh-hHHHHHH----------hccCCCHHHHHHHHHHHHHHHHHHHhc---CcccccCCcceeeecCCCceeec
Confidence 999999987 9999997 467799999999999999999999977 99999999999999999999999
Q ss_pred ecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhccccCCC
Q 039533 784 DFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKALPD 863 (949)
Q Consensus 784 DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~ 863 (949)
|||+|+.++...... ..+.||+.|||||+..+..|+..+|+||+||++||+++|++||-..
T Consensus 143 dFg~Ar~m~~~t~vl--tsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~----------------- 203 (808)
T KOG0597|consen 143 DFGLARAMSTNTSVL--TSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYAR----------------- 203 (808)
T ss_pred hhhhhhhcccCceee--eeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHH-----------------
Confidence 999999877644322 3577999999999999999999999999999999999999999421
Q ss_pred chhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 039533 864 DVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVH 926 (949)
Q Consensus 864 ~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 926 (949)
.+..++...+..+.. + +......+..++...+.+||.+|.|..+++.
T Consensus 204 si~~Lv~~I~~d~v~--------------~--p~~~S~~f~nfl~gLL~kdP~~RltW~~Ll~ 250 (808)
T KOG0597|consen 204 SITQLVKSILKDPVK--------------P--PSTASSSFVNFLQGLLIKDPAQRLTWTDLLG 250 (808)
T ss_pred HHHHHHHHHhcCCCC--------------C--cccccHHHHHHHHHHhhcChhhcccHHHHhc
Confidence 111222111111110 0 0133456788889999999999999998864
No 28
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=100.00 E-value=4.8e-39 Score=357.94 Aligned_cols=271 Identities=25% Similarity=0.358 Sum_probs=205.3
Q ss_pred hcCCCCCCeeeeecCceEEEEEEc-----CCCEEEEEEEEecCCC-cchHHHHHHHHHHHhc-CCCcceeEEeeeecccc
Q 039533 625 TSGFSSANLVGVGSFGSVYKGIID-----EGRTTIAVKVFNLQHH-GASRSFIAECKALKSI-RHRNLVKVLTACLGADY 697 (949)
Q Consensus 625 ~~~y~~~~~lg~G~~g~Vy~~~~~-----~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~ 697 (949)
.++|++.++||+|+||.||+|.+. .+++.||||+++.... ...+.+.+|+.++.++ +||||++++++|...
T Consensus 6 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~-- 83 (338)
T cd05102 6 RDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTKP-- 83 (338)
T ss_pred hhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecCC--
Confidence 467999999999999999999852 2456899999874332 2346789999999999 899999999987533
Q ss_pred cCCccceeEeeeccCCChhhhcCCCCCCCc--------------------------------------------------
Q 039533 698 RGNDFKASVYEFMHYGSLEEWLHPFTGEDE-------------------------------------------------- 727 (949)
Q Consensus 698 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~-------------------------------------------------- 727 (949)
....++||||+++|+|.+++........
T Consensus 84 --~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (338)
T cd05102 84 --NGPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQ 161 (338)
T ss_pred --CCceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccch
Confidence 2357899999999999999864211000
Q ss_pred --cccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEeecccceecCCCCCccccccccC
Q 039533 728 --IDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVGDFGLARILSPDHTQTSSFSVKG 805 (949)
Q Consensus 728 --~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~g 805 (949)
.......+++.++..++.|+++||+|||++ +|+||||||+||++++++.+||+|||+++...............+
T Consensus 162 ~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~ 238 (338)
T cd05102 162 ETDDLWKSPLTMEDLICYSFQVARGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARL 238 (338)
T ss_pred hccccccCCCCHHHHHHHHHHHHHHHHHHHHC---CEECCCCccceEEEcCCCcEEEeecccccccccCcchhcccCCCC
Confidence 000123588899999999999999999977 999999999999999999999999999987644333222223346
Q ss_pred ccCccCccccCCCccCCccchHHHHHHHHHHHh-CCCCCccccccCchhhhhccccCCCchhhhcccCCCCCchhhhhhh
Q 039533 806 SLGYIAPEYGVGCEVSTNGDVYSYGILLLELVI-GKKPIDIMFEGDINLHNFGRKALPDDVMDIVDSSLLPDDEDLILTG 884 (949)
Q Consensus 806 t~~y~aPE~~~~~~~~~~sDiwSlGvvl~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~ 884 (949)
+..|+|||++.+..++.++|||||||++|||++ |..||....... .+.. .+.+.....
T Consensus 239 ~~~y~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~-~~~~-----------~~~~~~~~~--------- 297 (338)
T cd05102 239 PLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINE-EFCQ-----------RLKDGTRMR--------- 297 (338)
T ss_pred CccccCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccH-HHHH-----------HHhcCCCCC---------
Confidence 788999999998899999999999999999997 999986432111 0000 000000000
Q ss_pred chhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHHhHH
Q 039533 885 NQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHELQSIKN 933 (949)
Q Consensus 885 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~~ 933 (949)
....++..+.+++.+||+.||++|||+.|+++.|+++..
T Consensus 298 ----------~~~~~~~~l~~li~~cl~~dp~~RPs~~el~~~l~~~~~ 336 (338)
T cd05102 298 ----------APENATPEIYRIMLACWQGDPKERPTFSALVEILGDLLQ 336 (338)
T ss_pred ----------CCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 001234568899999999999999999999999998764
No 29
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.1e-40 Score=340.95 Aligned_cols=250 Identities=23% Similarity=0.343 Sum_probs=205.8
Q ss_pred hcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCC-cchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCccc
Q 039533 625 TSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHH-GASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFK 703 (949)
Q Consensus 625 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 703 (949)
...|+..+.||+|.||.||+|.+..+++.||+|++..... ....++++|+.++.+++++||.++|+.+.... ..
T Consensus 12 ~~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~g~-----~L 86 (467)
T KOG0201|consen 12 ELLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGT-----KL 86 (467)
T ss_pred ccccccchhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheeecc-----cH
Confidence 3467788999999999999999999999999999986543 34578999999999999999999999977655 89
Q ss_pred eeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEe
Q 039533 704 ASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVG 783 (949)
Q Consensus 704 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~ 783 (949)
+++|||+.||++.+.++ ....+++....-|++++..|+.|||++ +.+|||||+.||++..+|.+|++
T Consensus 87 wiiMey~~gGsv~~lL~----------~~~~~~E~~i~~ilre~l~~l~ylH~~---~kiHrDIKaanil~s~~g~vkl~ 153 (467)
T KOG0201|consen 87 WIIMEYCGGGSVLDLLK----------SGNILDEFEIAVILREVLKGLDYLHSE---KKIHRDIKAANILLSESGDVKLA 153 (467)
T ss_pred HHHHHHhcCcchhhhhc----------cCCCCccceeeeehHHHHHHhhhhhhc---ceecccccccceeEeccCcEEEE
Confidence 99999999999999997 233346777778999999999999988 89999999999999999999999
Q ss_pred ecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhccccCCC
Q 039533 784 DFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKALPD 863 (949)
Q Consensus 784 DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~ 863 (949)
|||.+..+....... ..++||+.|||||++.+..|+.|+||||||++.+||.+|.+|+....+..
T Consensus 154 DfgVa~ql~~~~~rr--~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPmr------------- 218 (467)
T KOG0201|consen 154 DFGVAGQLTNTVKRR--KTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPMR------------- 218 (467)
T ss_pred ecceeeeeechhhcc--ccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcce-------------
Confidence 999998776554433 36789999999999998899999999999999999999999986443211
Q ss_pred chhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 039533 864 DVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVH 926 (949)
Q Consensus 864 ~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 926 (949)
+.-++-+.-.+..+ ....+.+.+++..|+..||+.||+|.++++
T Consensus 219 -vlflIpk~~PP~L~------------------~~~S~~~kEFV~~CL~k~P~~RpsA~~LLK 262 (467)
T KOG0201|consen 219 -VLFLIPKSAPPRLD------------------GDFSPPFKEFVEACLDKNPEFRPSAKELLK 262 (467)
T ss_pred -EEEeccCCCCCccc------------------cccCHHHHHHHHHHhhcCcccCcCHHHHhh
Confidence 11111111111110 133556889999999999999999999865
No 30
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-39 Score=332.20 Aligned_cols=286 Identities=20% Similarity=0.218 Sum_probs=213.1
Q ss_pred HHhcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEe--cCCCcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCC
Q 039533 623 NATSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFN--LQHHGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGN 700 (949)
Q Consensus 623 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~--~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 700 (949)
.....|...+.||+|+||.|+.|.+..+|+.||||.+. .......++..+|+++++.++|+||+.+.+.+.....+.-
T Consensus 19 ~i~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f 98 (359)
T KOG0660|consen 19 EIPRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKF 98 (359)
T ss_pred eccceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeeccccccccc
Confidence 34456777899999999999999999999999999987 4555567889999999999999999999999877555566
Q ss_pred ccceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCce
Q 039533 701 DFKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTA 780 (949)
Q Consensus 701 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~ 780 (949)
...|+|+|+|+ -+|...++ ....++...+.-+++|+++||+|+|+. +|+|||+||+|++++.+..+
T Consensus 99 ~DvYiV~elMe-tDL~~iik----------~~~~L~d~H~q~f~YQiLrgLKyiHSA---nViHRDLKPsNll~n~~c~l 164 (359)
T KOG0660|consen 99 NDVYLVFELME-TDLHQIIK----------SQQDLTDDHAQYFLYQILRGLKYIHSA---NVIHRDLKPSNLLLNADCDL 164 (359)
T ss_pred ceeEEehhHHh-hHHHHHHH----------cCccccHHHHHHHHHHHHHhcchhhcc---cccccccchhheeeccCCCE
Confidence 77999999995 59999997 344589999999999999999999977 99999999999999999999
Q ss_pred EEeecccceecCCCCCccccccccCccCccCccccC-CCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhccc
Q 039533 781 RVGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGV-GCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRK 859 (949)
Q Consensus 781 kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~ 859 (949)
||+|||+|+...........+..+.|..|+|||++. ...|+.+.||||.|||+.||++|++-|.....- ........
T Consensus 165 KI~DFGLAR~~~~~~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v--~Ql~lI~~ 242 (359)
T KOG0660|consen 165 KICDFGLARYLDKFFEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYV--HQLQLILE 242 (359)
T ss_pred EeccccceeeccccCcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchH--HHHHHHHH
Confidence 999999999886542222334567899999999865 457999999999999999999999988633211 11111111
Q ss_pred cC---CCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHH
Q 039533 860 AL---PDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHE 927 (949)
Q Consensus 860 ~~---~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 927 (949)
.. +++....+. .......+....+..+...............+++.+|+..||.+|+|++|.++.
T Consensus 243 ~lGtP~~e~l~~i~---s~~ar~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~h 310 (359)
T KOG0660|consen 243 LLGTPSEEDLQKIR---SEKARPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALAH 310 (359)
T ss_pred hcCCCCHHHHHHhc---cHHHHHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhcC
Confidence 11 111111110 000001111111111111122223445667899999999999999999998763
No 31
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=100.00 E-value=7.4e-43 Score=356.21 Aligned_cols=427 Identities=28% Similarity=0.414 Sum_probs=372.3
Q ss_pred cEEEEEcCCCCCCccccCCCCCCCCCceeeccCceeccccCCcccCcccCcEEeeccccccCcCCCCCCCCccceeecCC
Q 039533 66 RVTLLDLRSLKLAGSVSHFIGNLSFLKQLYLQVNSFTHEIPSEIGGLRRLKVLALNNNSICGEIPTNISRCSTLIPIHPQ 145 (949)
Q Consensus 66 ~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~ 145 (949)
-.+.+++++|.+. +.|++++.+..++.|+.++|+++ .+|++++.+.+|+.|+.++|.+. ++|+.++.+..|..|+..
T Consensus 69 ~l~vl~~~~n~l~-~lp~aig~l~~l~~l~vs~n~ls-~lp~~i~s~~~l~~l~~s~n~~~-el~~~i~~~~~l~dl~~~ 145 (565)
T KOG0472|consen 69 CLTVLNVHDNKLS-QLPAAIGELEALKSLNVSHNKLS-ELPEQIGSLISLVKLDCSSNELK-ELPDSIGRLLDLEDLDAT 145 (565)
T ss_pred ceeEEEeccchhh-hCCHHHHHHHHHHHhhcccchHh-hccHHHhhhhhhhhhhcccccee-ecCchHHHHhhhhhhhcc
Confidence 3678999999998 89999999999999999999998 89999999999999999999998 899999999999999999
Q ss_pred CccccccccccccCCCCCcEEECCCCCCCCCCCCCcCCCCCccEEeccccccCCCCCCcccCCCccccccccCccccccc
Q 039533 146 NNQLVGKILSRFSSLSKTEILNLGSNHLTGSIPSSLGNLSSIHTISLAYNNLDGTIPNSFGWFENLVFLSLAANNLSVVE 225 (949)
Q Consensus 146 ~n~l~~~~~~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 225 (949)
+|++.. .|+.+.++.+|..|++.+|+++...|..+ +++.|++||...|.++ .+|..++.+.+|..|+|..|+|..+
T Consensus 146 ~N~i~s-lp~~~~~~~~l~~l~~~~n~l~~l~~~~i-~m~~L~~ld~~~N~L~-tlP~~lg~l~~L~~LyL~~Nki~~l- 221 (565)
T KOG0472|consen 146 NNQISS-LPEDMVNLSKLSKLDLEGNKLKALPENHI-AMKRLKHLDCNSNLLE-TLPPELGGLESLELLYLRRNKIRFL- 221 (565)
T ss_pred cccccc-CchHHHHHHHHHHhhccccchhhCCHHHH-HHHHHHhcccchhhhh-cCChhhcchhhhHHHHhhhcccccC-
Confidence 999984 56677788899999999999995545444 5999999999999998 8999999999999999999998754
Q ss_pred ccccCCCCChhhhccccccccccCCCCCCCCCCcchhccccccCcccEEEccCCCCCccCCchhhcccccccEEEccCcc
Q 039533 226 NKLTGEVPSLEKLQRLQHFTITSNSLGSGGNDDLSFLCSLTNATRLTWMHINSNNFGGLLPGCISNLSKTIKTLFLNNNK 305 (949)
Q Consensus 226 ~~l~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~~~~L~~L~L~~N~l~~~~p~~~~~l~~~L~~L~L~~N~ 305 (949)
|++..+..|++|+++.|++...+.+ .+.++.++..|||..|+++. .|+.+.-+ ++|++||+++|.
T Consensus 222 -------Pef~gcs~L~Elh~g~N~i~~lpae------~~~~L~~l~vLDLRdNklke-~Pde~clL-rsL~rLDlSNN~ 286 (565)
T KOG0472|consen 222 -------PEFPGCSLLKELHVGENQIEMLPAE------HLKHLNSLLVLDLRDNKLKE-VPDEICLL-RSLERLDLSNND 286 (565)
T ss_pred -------CCCCccHHHHHHHhcccHHHhhHHH------Hhcccccceeeecccccccc-CchHHHHh-hhhhhhcccCCc
Confidence 5677888999999999999765432 45688999999999999994 67777766 679999999999
Q ss_pred ccCCCCCCCCCCCcccEEEeecceeccc--------------------------------------CCCc---ccccCCC
Q 039533 306 IYGSIPAGIGNFVNLQRLDMWNNQLSGT--------------------------------------IPPA---IGELQNL 344 (949)
Q Consensus 306 l~~~~~~~~~~l~~L~~L~L~~N~l~~~--------------------------------------~p~~---~~~l~~L 344 (949)
|+ ..|.+++++ +|+.|.+.+|.+..+ .+.. ...+.+.
T Consensus 287 is-~Lp~sLgnl-hL~~L~leGNPlrTiRr~ii~~gT~~vLKyLrs~~~~dglS~se~~~e~~~t~~~~~~~~~~~~i~t 364 (565)
T KOG0472|consen 287 IS-SLPYSLGNL-HLKFLALEGNPLRTIRREIISKGTQEVLKYLRSKIKDDGLSQSEGGTETAMTLPSESFPDIYAIITT 364 (565)
T ss_pred cc-cCCcccccc-eeeehhhcCCchHHHHHHHHcccHHHHHHHHHHhhccCCCCCCcccccccCCCCCCcccchhhhhhh
Confidence 99 688999999 999999999987521 0111 1234568
Q ss_pred CEEecCCcccccccCcccccccc---cceeecccccccccCCCCCCCCCCCc-EEEeeCccccCCCCCcccCCcccceee
Q 039533 345 KILGLNRNKLSGNIPPSIGNLKM---LLNLFLNDNFLEVSIPSSLGQCESLI-EINLSNNNLSGTIPPQFFSLSSLSISL 420 (949)
Q Consensus 345 ~~L~Ls~N~l~~~~p~~~~~l~~---L~~L~L~~N~l~~~~p~~~~~l~~L~-~L~l~~N~l~~~~p~~~~~l~~l~~~L 420 (949)
+.|+++.=+++ .+|+....-.. .+..+++.|++. .+|..+..++.+. .+.+++|.++ .+|..++.++++ ..|
T Consensus 365 kiL~~s~~qlt-~VPdEVfea~~~~~Vt~VnfskNqL~-elPk~L~~lkelvT~l~lsnn~is-fv~~~l~~l~kL-t~L 440 (565)
T KOG0472|consen 365 KILDVSDKQLT-LVPDEVFEAAKSEIVTSVNFSKNQLC-ELPKRLVELKELVTDLVLSNNKIS-FVPLELSQLQKL-TFL 440 (565)
T ss_pred hhhcccccccc-cCCHHHHHHhhhcceEEEecccchHh-hhhhhhHHHHHHHHHHHhhcCccc-cchHHHHhhhcc-eee
Confidence 89999999999 77877665555 889999999998 7888888777764 5666666665 999999999999 789
Q ss_pred ccCCCccCCCCccccccccccceeeeccccccccCCcccccccchhhcccCccccccccCCCcCCCCCCCEEECCCCcCC
Q 039533 421 DWSRNKLTGSLPIEVGKLKILEFLYVYENRLEGEIPSTFGNCIRLEQLGMGGNLFQGPISSSLGSLRGLRVLDLSQNNLS 500 (949)
Q Consensus 421 ~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 500 (949)
+|++|-+. .+|..++.+..|+.||+|.|++. .+|..+..+..|+.+-.++|++....|+.+.+|.+|..|||.+|.|.
T Consensus 441 ~L~NN~Ln-~LP~e~~~lv~Lq~LnlS~NrFr-~lP~~~y~lq~lEtllas~nqi~~vd~~~l~nm~nL~tLDL~nNdlq 518 (565)
T KOG0472|consen 441 DLSNNLLN-DLPEEMGSLVRLQTLNLSFNRFR-MLPECLYELQTLETLLASNNQIGSVDPSGLKNMRNLTTLDLQNNDLQ 518 (565)
T ss_pred ecccchhh-hcchhhhhhhhhheecccccccc-cchHHHhhHHHHHHHHhccccccccChHHhhhhhhcceeccCCCchh
Confidence 99999998 89999999999999999999999 89999999999999999999999877777999999999999999998
Q ss_pred CcCcccccCCc-cceEeCCCCcCc
Q 039533 501 GEIPKFLAGLS-LNNLNLSYNDLE 523 (949)
Q Consensus 501 ~~~p~~~~~~~-L~~l~ls~N~l~ 523 (949)
.+|..++.+. |++|++++|++.
T Consensus 519 -~IPp~LgnmtnL~hLeL~gNpfr 541 (565)
T KOG0472|consen 519 -QIPPILGNMTNLRHLELDGNPFR 541 (565)
T ss_pred -hCChhhccccceeEEEecCCccC
Confidence 6777777776 999999999999
No 32
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=8.9e-39 Score=350.86 Aligned_cols=256 Identities=24% Similarity=0.315 Sum_probs=205.9
Q ss_pred HHhcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecC----CC-cchHHHHHHHHHHHhcC-CCcceeEEeeeeccc
Q 039533 623 NATSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQ----HH-GASRSFIAECKALKSIR-HRNLVKVLTACLGAD 696 (949)
Q Consensus 623 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~----~~-~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~ 696 (949)
...++|.+.+.||+|+||.|+.|.+..+++.||+|++... .. ...+.+.+|+.++++++ ||||+++++++....
T Consensus 14 ~~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~ 93 (370)
T KOG0583|consen 14 LSIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPT 93 (370)
T ss_pred cccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCC
Confidence 3457899999999999999999999989999999987653 22 23456778999999998 999999999976555
Q ss_pred ccCCccceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecC
Q 039533 697 YRGNDFKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDD 776 (949)
Q Consensus 697 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~ 776 (949)
..++||||+.+|+|.+++. ...++.+.++..++.|++.|++|+|++ ||+||||||+||+++.
T Consensus 94 -----~~~ivmEy~~gGdL~~~i~----------~~g~l~E~~ar~~F~Qlisav~y~H~~---gi~HRDLK~ENilld~ 155 (370)
T KOG0583|consen 94 -----KIYIVMEYCSGGDLFDYIV----------NKGRLKEDEARKYFRQLISAVAYCHSR---GIVHRDLKPENILLDG 155 (370)
T ss_pred -----eEEEEEEecCCccHHHHHH----------HcCCCChHHHHHHHHHHHHHHHHHHhC---CEeeCCCCHHHEEecC
Confidence 6999999999999999997 246688899999999999999999977 9999999999999999
Q ss_pred C-CceEEeecccceecC-CCCCccccccccCccCccCccccCCCc-cC-CccchHHHHHHHHHHHhCCCCCccccccCch
Q 039533 777 Y-MTARVGDFGLARILS-PDHTQTSSFSVKGSLGYIAPEYGVGCE-VS-TNGDVYSYGILLLELVIGKKPIDIMFEGDIN 852 (949)
Q Consensus 777 ~-~~~kl~DfG~a~~~~-~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~-~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~ 852 (949)
+ +++||+|||++.... .+... ....||+.|+|||++.+.. |+ .++||||+||++|.|++|+.||+.. +
T Consensus 156 ~~~~~Kl~DFG~s~~~~~~~~~l---~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~-----~ 227 (370)
T KOG0583|consen 156 NEGNLKLSDFGLSAISPGEDGLL---KTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDS-----N 227 (370)
T ss_pred CCCCEEEeccccccccCCCCCcc---cCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCc-----c
Confidence 9 999999999999873 22222 2456999999999999977 75 8899999999999999999999742 1
Q ss_pred hhhhccccCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHH-HHHHHHHhhccccCCCCCCCCHHHHHHHHHHh
Q 039533 853 LHNFGRKALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIEC-LISMVRIGVACSMELPQDRTNMTNVVHELQSI 931 (949)
Q Consensus 853 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i 931 (949)
.....++..... . .++ ... ...+..++.+|+..||.+|+|+.|++ .-.-+
T Consensus 228 ~~~l~~ki~~~~--------~------------------~~p--~~~~S~~~~~Li~~mL~~~P~~R~t~~~i~-~h~w~ 278 (370)
T KOG0583|consen 228 VPNLYRKIRKGE--------F------------------KIP--SYLLSPEARSLIEKMLVPDPSTRITLLEIL-EHPWF 278 (370)
T ss_pred HHHHHHHHhcCC--------c------------------cCC--CCcCCHHHHHHHHHHcCCCcccCCCHHHHh-hChhh
Confidence 111111100000 0 000 011 45678999999999999999999999 55444
Q ss_pred HH
Q 039533 932 KN 933 (949)
Q Consensus 932 ~~ 933 (949)
+.
T Consensus 279 ~~ 280 (370)
T KOG0583|consen 279 QK 280 (370)
T ss_pred cc
Confidence 44
No 33
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=100.00 E-value=5.6e-40 Score=347.65 Aligned_cols=245 Identities=25% Similarity=0.368 Sum_probs=203.7
Q ss_pred CCeeeeecCceEEEEEEcCCCEEEEEEEEecCCCcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCccceeEeeec
Q 039533 631 ANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFKASVYEFM 710 (949)
Q Consensus 631 ~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~ 710 (949)
.+.||.|+.|.||+|+.+ ++.||||+++. .-..+|+.|++++||||+.+.|+|.... .+|||||||
T Consensus 129 LeWlGSGaQGAVF~Grl~--netVAVKKV~e-------lkETdIKHLRkLkH~NII~FkGVCtqsP-----cyCIiMEfC 194 (904)
T KOG4721|consen 129 LEWLGSGAQGAVFLGRLH--NETVAVKKVRE-------LKETDIKHLRKLKHPNIITFKGVCTQSP-----CYCIIMEFC 194 (904)
T ss_pred hhhhccCcccceeeeecc--CceehhHHHhh-------hhhhhHHHHHhccCcceeeEeeeecCCc-----eeEEeeecc
Confidence 478999999999999997 78999998752 2235788999999999999999998766 789999999
Q ss_pred cCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEeeccccee
Q 039533 711 HYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVGDFGLARI 790 (949)
Q Consensus 711 ~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~DfG~a~~ 790 (949)
..|-|++.++ .+..++......|..+||.|+.|||.+ .|||||||+-||||+.+..+||+|||-++.
T Consensus 195 a~GqL~~VLk----------a~~~itp~llv~Wsk~IA~GM~YLH~h---KIIHRDLKSPNiLIs~~d~VKIsDFGTS~e 261 (904)
T KOG4721|consen 195 AQGQLYEVLK----------AGRPITPSLLVDWSKGIAGGMNYLHLH---KIIHRDLKSPNILISYDDVVKISDFGTSKE 261 (904)
T ss_pred ccccHHHHHh----------ccCccCHHHHHHHHHHhhhhhHHHHHh---hHhhhccCCCceEeeccceEEeccccchHh
Confidence 9999999997 456788889999999999999999987 899999999999999999999999999987
Q ss_pred cCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhccccCCCchhhhcc
Q 039533 791 LSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKALPDDVMDIVD 870 (949)
Q Consensus 791 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~d 870 (949)
..+-.+ ...+.||..|||||++...+.++|+||||||||||||+||..||.+.....+ ++.. ....
T Consensus 262 ~~~~ST---kMSFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssAI-----IwGV-GsNs----- 327 (904)
T KOG4721|consen 262 LSDKST---KMSFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSAI-----IWGV-GSNS----- 327 (904)
T ss_pred hhhhhh---hhhhhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchhee-----EEec-cCCc-----
Confidence 665432 3357799999999999999999999999999999999999999975422211 1000 0000
Q ss_pred cCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHHhHHhhc
Q 039533 871 SSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHELQSIKNILL 936 (949)
Q Consensus 871 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~~~~~ 936 (949)
...+.+..|++-+.-+++.||+..|..||++.+++..|+-....+.
T Consensus 328 --------------------L~LpvPstcP~GfklL~Kqcw~sKpRNRPSFrqil~HldIa~pell 373 (904)
T KOG4721|consen 328 --------------------LHLPVPSTCPDGFKLLLKQCWNSKPRNRPSFRQILLHLDIASPELL 373 (904)
T ss_pred --------------------ccccCcccCchHHHHHHHHHHhcCCCCCccHHHHHHHHhhcCHHHh
Confidence 1112234778888999999999999999999999999876554443
No 34
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=100.00 E-value=5.8e-39 Score=321.24 Aligned_cols=275 Identities=21% Similarity=0.236 Sum_probs=206.6
Q ss_pred hcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCCc--chHHHHHHHHHHHhcCCCcceeEEeeeecccccCCcc
Q 039533 625 TSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHG--ASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDF 702 (949)
Q Consensus 625 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 702 (949)
.+.|+..++|++|.||.||+|+++.+++.||+|+++...+. -.-...+|+.++.+.+|||||.+-.+..+.. -+.
T Consensus 75 v~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~---~d~ 151 (419)
T KOG0663|consen 75 VEEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSN---MDK 151 (419)
T ss_pred HHHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccc---cce
Confidence 35688889999999999999999999999999999865432 2345689999999999999999999887655 346
Q ss_pred ceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEE
Q 039533 703 KASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARV 782 (949)
Q Consensus 703 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl 782 (949)
.|+||||++. +|...+.. ...++...++.-++.|+++|++|||.+ .|+||||||+|+|++..|.+||
T Consensus 152 iy~VMe~~Eh-DLksl~d~---------m~q~F~~~evK~L~~QlL~glk~lH~~---wilHRDLK~SNLLm~~~G~lKi 218 (419)
T KOG0663|consen 152 IYIVMEYVEH-DLKSLMET---------MKQPFLPGEVKTLMLQLLRGLKHLHDN---WILHRDLKTSNLLLSHKGILKI 218 (419)
T ss_pred eeeeHHHHHh-hHHHHHHh---------ccCCCchHHHHHHHHHHHHHHHHHhhc---eeEecccchhheeeccCCcEEe
Confidence 8999999987 89998873 335789999999999999999999977 8999999999999999999999
Q ss_pred eecccceecCCCCCccccccccCccCccCccccCCC-ccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhcc---
Q 039533 783 GDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGC-EVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGR--- 858 (949)
Q Consensus 783 ~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~--- 858 (949)
+|||+|+.++.+... .+..+-|..|+|||.+.+. .|+++.|+||+|||+.|++++++-|....+-+..-.-+..
T Consensus 219 aDFGLAR~ygsp~k~--~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~If~llGt 296 (419)
T KOG0663|consen 219 ADFGLAREYGSPLKP--YTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDKIFKLLGT 296 (419)
T ss_pred cccchhhhhcCCccc--CcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHHHHHHhCC
Confidence 999999998876432 2255679999999998876 4899999999999999999999998755433221111111
Q ss_pred ---ccCCCc-hhhhcc-cCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 039533 859 ---KALPDD-VMDIVD-SSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVH 926 (949)
Q Consensus 859 ---~~~~~~-~~~~~d-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 926 (949)
..++.- ....+. -.....+.. .-...|.... ..+.-.+++...+..||++|.||.|.++
T Consensus 297 Pte~iwpg~~~lp~~k~~~f~~~pyn--------~lr~kF~~~~-lse~g~~Lln~llt~dP~kR~tA~~~L~ 360 (419)
T KOG0663|consen 297 PSEAIWPGYSELPAVKKMTFSEHPYN--------NLRKKFGALS-LSEQGFDLLNKLLTYDPGKRITAEDGLK 360 (419)
T ss_pred CccccCCCccccchhhccccCCCCch--------hhhhhccccc-cchhHHHHHHHHhccCccccccHHHhhc
Confidence 111110 000000 011111110 0011111111 2355678899999999999999998764
No 35
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=100.00 E-value=1.1e-38 Score=339.84 Aligned_cols=249 Identities=20% Similarity=0.267 Sum_probs=200.0
Q ss_pred HHHhcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCC---CcchHHHHHHHHHHHhcCCCcceeEEeeeeccccc
Q 039533 622 YNATSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQH---HGASRSFIAECKALKSIRHRNLVKVLTACLGADYR 698 (949)
Q Consensus 622 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 698 (949)
....++|...++||+|+||.||+|+-+.+|..+|+|++++.. .+..+.++.|-.+|...++|.||++|..|.+.+
T Consensus 137 r~~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~-- 214 (550)
T KOG0605|consen 137 RLSLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKE-- 214 (550)
T ss_pred cCCcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCC--
Confidence 345688999999999999999999999999999999998653 344567889999999999999999998866555
Q ss_pred CCccceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCC
Q 039533 699 GNDFKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYM 778 (949)
Q Consensus 699 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~ 778 (949)
..|+||||++||++..+|. ....+++..++.++.+++-|++.+|.. |+|||||||+|+|||..|
T Consensus 215 ---~LYLiMEylPGGD~mTLL~----------~~~~L~e~~arfYiaE~vlAI~~iH~~---gyIHRDIKPdNlLiD~~G 278 (550)
T KOG0605|consen 215 ---YLYLIMEYLPGGDMMTLLM----------RKDTLTEDWARFYIAETVLAIESIHQL---GYIHRDIKPDNLLIDAKG 278 (550)
T ss_pred ---eeEEEEEecCCccHHHHHH----------hcCcCchHHHHHHHHHHHHHHHHHHHc---CcccccCChhheeecCCC
Confidence 8999999999999999997 346799999999999999999999966 999999999999999999
Q ss_pred ceEEeecccceecCC----------------------CCCc-----cc------------------cccccCccCccCcc
Q 039533 779 TARVGDFGLARILSP----------------------DHTQ-----TS------------------SFSVKGSLGYIAPE 813 (949)
Q Consensus 779 ~~kl~DfG~a~~~~~----------------------~~~~-----~~------------------~~~~~gt~~y~aPE 813 (949)
++||+|||++.-+.. .... .. ....+|||.|+|||
T Consensus 279 HiKLSDFGLs~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPE 358 (550)
T KOG0605|consen 279 HIKLSDFGLSTGLDKKHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPE 358 (550)
T ss_pred CEeeccccccchhhhhhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchH
Confidence 999999999854311 0000 00 12457999999999
Q ss_pred ccCCCccCCccchHHHHHHHHHHHhCCCCCccccccC--chhhhhccccCCCchhhhcccCCCCCchhhhhhhchhhhhh
Q 039533 814 YGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGD--INLHNFGRKALPDDVMDIVDSSLLPDDEDLILTGNQRQKQA 891 (949)
Q Consensus 814 ~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~--~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~ 891 (949)
++.+..|+..+|+||+|||+||||.|.+||....... ..+..|... +.
T Consensus 359 Vll~kgY~~~cDwWSLG~ImyEmLvGyPPF~s~tp~~T~rkI~nwr~~-------------l~----------------- 408 (550)
T KOG0605|consen 359 VLLGKGYGKECDWWSLGCIMYEMLVGYPPFCSETPQETYRKIVNWRET-------------LK----------------- 408 (550)
T ss_pred HHhcCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhhh-------------cc-----------------
Confidence 9999999999999999999999999999996432221 112222110 10
Q ss_pred hhhhHHHHHHHHHHHhhccccCCCCCCCC
Q 039533 892 RINSIIECLISMVRIGVACSMELPQDRTN 920 (949)
Q Consensus 892 ~~~~~~~~~~~l~~l~~~cl~~dP~~RPs 920 (949)
++.-..+..+..++|.+|+. ||++|-.
T Consensus 409 -fP~~~~~s~eA~DLI~rll~-d~~~RLG 435 (550)
T KOG0605|consen 409 -FPEEVDLSDEAKDLITRLLC-DPENRLG 435 (550)
T ss_pred -CCCcCcccHHHHHHHHHHhc-CHHHhcC
Confidence 11111233567889999999 9999986
No 36
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=100.00 E-value=6.5e-39 Score=316.34 Aligned_cols=199 Identities=28% Similarity=0.329 Sum_probs=178.4
Q ss_pred hcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCCc---chHHHHHHHHHHHhcCCCcceeEEeeeecccccCCc
Q 039533 625 TSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHG---ASRSFIAECKALKSIRHRNLVKVLTACLGADYRGND 701 (949)
Q Consensus 625 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 701 (949)
.++|+..+.||.|+||.|.+++.+.+|..+|+|+++....- ..+...+|..+|+.+.||+++++++.|.+..
T Consensus 43 l~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~----- 117 (355)
T KOG0616|consen 43 LQDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNS----- 117 (355)
T ss_pred hhhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCC-----
Confidence 35688899999999999999999999999999999755432 2355778999999999999999999876655
Q ss_pred cceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceE
Q 039533 702 FKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTAR 781 (949)
Q Consensus 702 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~k 781 (949)
..++||||++||.|..+++ ..+++++..++-+|.||+.|++|||+. +|++||+||+|||+|.+|.+|
T Consensus 118 ~lymvmeyv~GGElFS~Lr----------k~~rF~e~~arFYAAeivlAleylH~~---~iiYRDLKPENiLlD~~G~iK 184 (355)
T KOG0616|consen 118 NLYMVMEYVPGGELFSYLR----------KSGRFSEPHARFYAAEIVLALEYLHSL---DIIYRDLKPENLLLDQNGHIK 184 (355)
T ss_pred eEEEEEeccCCccHHHHHH----------hcCCCCchhHHHHHHHHHHHHHHHHhc---CeeeccCChHHeeeccCCcEE
Confidence 8999999999999999997 456799999999999999999999977 899999999999999999999
Q ss_pred EeecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccc
Q 039533 782 VGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIM 846 (949)
Q Consensus 782 l~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~ 846 (949)
|+|||+|+..... +. ...||+.|+|||++....+..++|.|||||++|||+.|.+||...
T Consensus 185 itDFGFAK~v~~r-T~----TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~ 244 (355)
T KOG0616|consen 185 ITDFGFAKRVSGR-TW----TLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDD 244 (355)
T ss_pred EEeccceEEecCc-EE----EecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCC
Confidence 9999999987654 22 456999999999999999999999999999999999999999643
No 37
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=100.00 E-value=6.9e-40 Score=360.00 Aligned_cols=256 Identities=23% Similarity=0.434 Sum_probs=212.2
Q ss_pred CCCCCeeeeecCceEEEEEEcCCC---EEEEEEEEecCCC-cchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCccc
Q 039533 628 FSSANLVGVGSFGSVYKGIIDEGR---TTIAVKVFNLQHH-GASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFK 703 (949)
Q Consensus 628 y~~~~~lg~G~~g~Vy~~~~~~~~---~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 703 (949)
..+.++||.|.||.||+|+.+..+ ..||||.++.... ....+|..|+.||.+++||||+++.|+..... ..
T Consensus 631 i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQFdHPNIIrLEGVVTks~-----Pv 705 (996)
T KOG0196|consen 631 VKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIRLEGVVTKSK-----PV 705 (996)
T ss_pred eEEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccCCCCcEEEEEEEEecCc-----ee
Confidence 456789999999999999997555 4699999986543 34468999999999999999999999975444 78
Q ss_pred eeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEe
Q 039533 704 ASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVG 783 (949)
Q Consensus 704 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~ 783 (949)
+||+|||++|+|+.||+. ..+++++.+...+.++||.|++||-+. ++|||||..+|||++.+..+|++
T Consensus 706 MIiTEyMENGsLDsFLR~---------~DGqftviQLVgMLrGIAsGMkYLsdm---~YVHRDLAARNILVNsnLvCKVs 773 (996)
T KOG0196|consen 706 MIITEYMENGSLDSFLRQ---------NDGQFTVIQLVGMLRGIASGMKYLSDM---NYVHRDLAARNILVNSNLVCKVS 773 (996)
T ss_pred EEEhhhhhCCcHHHHHhh---------cCCceEeehHHHHHHHHHHHhHHHhhc---CchhhhhhhhheeeccceEEEec
Confidence 999999999999999973 335589999999999999999999965 99999999999999999999999
Q ss_pred ecccceecCCCCCcc-ccccccCccCccCccccCCCccCCccchHHHHHHHHHHHh-CCCCCccccccCchhhhhccccC
Q 039533 784 DFGLARILSPDHTQT-SSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVI-GKKPIDIMFEGDINLHNFGRKAL 861 (949)
Q Consensus 784 DfG~a~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~ellt-g~~Pf~~~~~~~~~~~~~~~~~~ 861 (949)
|||+++.+.++.... ....-.-..+|.|||.+...+++.+|||||||++|||.++ |.+||-++...+
T Consensus 774 DFGLSRvledd~~~~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdmSNQd----------- 842 (996)
T KOG0196|consen 774 DFGLSRVLEDDPEAAYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQD----------- 842 (996)
T ss_pred cccceeecccCCCccccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCcccccchHH-----------
Confidence 999999886665321 1111223578999999999999999999999999999887 999985443221
Q ss_pred CCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHHhH
Q 039533 862 PDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHELQSIK 932 (949)
Q Consensus 862 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~ 932 (949)
+...+ ....|.+.+.+||..+.+|+..||++|..+||.+.|++..|+++.
T Consensus 843 ---VIkaI------------------e~gyRLPpPmDCP~aL~qLMldCWqkdR~~RP~F~qiV~~lDklI 892 (996)
T KOG0196|consen 843 ---VIKAI------------------EQGYRLPPPMDCPAALYQLMLDCWQKDRNRRPKFAQIVSTLDKLI 892 (996)
T ss_pred ---HHHHH------------------HhccCCCCCCCCcHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHh
Confidence 11111 123344555689999999999999999999999999999999974
No 38
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=9.5e-39 Score=373.14 Aligned_cols=269 Identities=25% Similarity=0.422 Sum_probs=217.2
Q ss_pred CCCCCCeeeeecCceEEEEEEcCCC-----EEEEEEEEecCC-CcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCC
Q 039533 627 GFSSANLVGVGSFGSVYKGIIDEGR-----TTIAVKVFNLQH-HGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGN 700 (949)
Q Consensus 627 ~y~~~~~lg~G~~g~Vy~~~~~~~~-----~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 700 (949)
.-+..+.||+|.||.||+|....-. ..||||.++... .+...+|.+|..+|++++|||||+++|.|....
T Consensus 693 ~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~---- 768 (1025)
T KOG1095|consen 693 NVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSG---- 768 (1025)
T ss_pred heEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCC----
Confidence 3455678999999999999986322 348999887543 455678999999999999999999999998755
Q ss_pred ccceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCce
Q 039533 701 DFKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTA 780 (949)
Q Consensus 701 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~ 780 (949)
..++++|||++|+|..|++..+.. ......++..+.+.++.|||+|+.||+++ ++|||||..+|+|+++...+
T Consensus 769 -~~~i~leyM~gGDL~sflr~~r~~---~~~~~~L~~~dLl~~a~dvA~G~~YLe~~---~fvHRDLAaRNCLL~~~r~V 841 (1025)
T KOG1095|consen 769 -PPLILLEYMEGGDLLSFLRESRPA---PFQPSNLSMRDLLAFALDVAKGMNYLESK---HFVHRDLAARNCLLDERRVV 841 (1025)
T ss_pred -CcEEEehhcccCcHHHHHHhcccc---cCCCCCCCHHHHHHHHHHHhhhhHHHHhC---CCcCcchhhhheeecccCcE
Confidence 789999999999999999854332 23467799999999999999999999987 89999999999999999999
Q ss_pred EEeecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHh-CCCCCccccccCchhhhhccc
Q 039533 781 RVGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVI-GKKPIDIMFEGDINLHNFGRK 859 (949)
Q Consensus 781 kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~ellt-g~~Pf~~~~~~~~~~~~~~~~ 859 (949)
||+|||+|+.+.............-...|||||.+..+.++.|+|||||||++||++| |..||......+.-
T Consensus 842 KIaDFGlArDiy~~~yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n~~v~------- 914 (1025)
T KOG1095|consen 842 KIADFGLARDIYDKDYYRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNFEVL------- 914 (1025)
T ss_pred EEcccchhHhhhhchheeccCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcchHHHH-------
Confidence 9999999995544433332222123468999999999999999999999999999999 99998643222110
Q ss_pred cCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHHhHHhhccC
Q 039533 860 ALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHELQSIKNILLGV 938 (949)
Q Consensus 860 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~~~~~~~ 938 (949)
..+. .+.|.+.+..|+..+.+++..||+.+|++||++..+++++.+|.....+.
T Consensus 915 ------~~~~-------------------~ggRL~~P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~q~~~i~~~~~~~ 968 (1025)
T KOG1095|consen 915 ------LDVL-------------------EGGRLDPPSYCPEKLYQLMLQCWKHDPEDRPSFRTIVEQDPAISNAALGT 968 (1025)
T ss_pred ------HHHH-------------------hCCccCCCCCCChHHHHHHHHHccCChhhCccHHHHHhhhhhhhhhhccC
Confidence 0011 11133445688999999999999999999999999999999998877665
No 39
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=9.7e-39 Score=346.24 Aligned_cols=249 Identities=22% Similarity=0.263 Sum_probs=207.2
Q ss_pred hcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCC---CcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCc
Q 039533 625 TSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQH---HGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGND 701 (949)
Q Consensus 625 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 701 (949)
.+-|..++.||.|+.|.|-.|++..+|+.+|||++.... ......+.+|+.+|+.+.||||+++|+++.+ ..
T Consensus 11 iGpwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~-----~~ 85 (786)
T KOG0588|consen 11 IGPWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWEN-----KQ 85 (786)
T ss_pred ccceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeecc-----Cc
Confidence 456889999999999999999999999999999997552 2234578899999999999999999999654 44
Q ss_pred cceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceE
Q 039533 702 FKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTAR 781 (949)
Q Consensus 702 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~k 781 (949)
+.|+|.||+++|-|.+++- ..+.+++.++.+++.||+.|+.|+|+. +|+|||+||+|+|+|..+++|
T Consensus 86 ~lylvlEyv~gGELFdylv----------~kG~l~e~eaa~ff~QIi~gv~yCH~~---~icHRDLKpENlLLd~~~nIK 152 (786)
T KOG0588|consen 86 HLYLVLEYVPGGELFDYLV----------RKGPLPEREAAHFFRQILDGVSYCHAF---NICHRDLKPENLLLDVKNNIK 152 (786)
T ss_pred eEEEEEEecCCchhHHHHH----------hhCCCCCHHHHHHHHHHHHHHHHHhhh---cceeccCCchhhhhhcccCEe
Confidence 8999999999999999996 456799999999999999999999977 899999999999999999999
Q ss_pred EeecccceecCCCCCccccccccCccCccCccccCCCccC-CccchHHHHHHHHHHHhCCCCCccccccCchhhhhcccc
Q 039533 782 VGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVS-TNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKA 860 (949)
Q Consensus 782 l~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~ 860 (949)
|+|||+|..-.++.-.. ...|++.|.|||++.|.+|. .++||||+|||+|.|+||+.||++. ++....
T Consensus 153 IADFGMAsLe~~gklLe---TSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDd-----Nir~LL--- 221 (786)
T KOG0588|consen 153 IADFGMASLEVPGKLLE---TSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDD-----NIRVLL--- 221 (786)
T ss_pred eeccceeecccCCcccc---ccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCc-----cHHHHH---
Confidence 99999998755544322 24599999999999999885 8999999999999999999999722 222111
Q ss_pred CCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHH
Q 039533 861 LPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHE 927 (949)
Q Consensus 861 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 927 (949)
.+.. ...++.+..++.+..+++.+|+..||++|.|++||.+.
T Consensus 222 ---------lKV~----------------~G~f~MPs~Is~eaQdLLr~ml~VDp~~RiT~~eI~kH 263 (786)
T KOG0588|consen 222 ---------LKVQ----------------RGVFEMPSNISSEAQDLLRRMLDVDPSTRITTEEILKH 263 (786)
T ss_pred ---------HHHH----------------cCcccCCCcCCHHHHHHHHHHhccCccccccHHHHhhC
Confidence 1111 11122234566778999999999999999999999874
No 40
>PHA02988 hypothetical protein; Provisional
Probab=100.00 E-value=1.1e-37 Score=337.12 Aligned_cols=252 Identities=21% Similarity=0.310 Sum_probs=199.0
Q ss_pred CCeeeeecCceEEEEEEcCCCEEEEEEEEecCCCcc---hHHHHHHHHHHHhcCCCcceeEEeeeecccccCCccceeEe
Q 039533 631 ANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHGA---SRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFKASVY 707 (949)
Q Consensus 631 ~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~ 707 (949)
...||+|++|.||+|... ++.||||+++...... .+.+.+|+.++++++||||+++++++.+.. ++....++||
T Consensus 25 ~~~i~~g~~~~v~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~-~~~~~~~lv~ 101 (283)
T PHA02988 25 SVLIKENDQNSIYKGIFN--NKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIV-DDLPRLSLIL 101 (283)
T ss_pred CeEEeeCCceEEEEEEEC--CEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecc-cCCCceEEEE
Confidence 368999999999999984 8999999997543332 467889999999999999999999986521 2234678999
Q ss_pred eeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEeeccc
Q 039533 708 EFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVGDFGL 787 (949)
Q Consensus 708 e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~DfG~ 787 (949)
||+++|+|.+++.. ...+++..+..++.|++.|++|||+.. +++||||||+||++++++.+||+|||+
T Consensus 102 Ey~~~g~L~~~l~~----------~~~~~~~~~~~i~~~i~~~l~~lH~~~--~~~Hrdlkp~nill~~~~~~kl~dfg~ 169 (283)
T PHA02988 102 EYCTRGYLREVLDK----------EKDLSFKTKLDMAIDCCKGLYNLYKYT--NKPYKNLTSVSFLVTENYKLKIICHGL 169 (283)
T ss_pred EeCCCCcHHHHHhh----------CCCCChhHHHHHHHHHHHHHHHHHhcC--CCCCCcCChhhEEECCCCcEEEcccch
Confidence 99999999999972 345889999999999999999999642 688999999999999999999999999
Q ss_pred ceecCCCCCccccccccCccCccCccccCC--CccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhccccCCCch
Q 039533 788 ARILSPDHTQTSSFSVKGSLGYIAPEYGVG--CEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKALPDDV 865 (949)
Q Consensus 788 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~ 865 (949)
++....... ...|+..|+|||++.+ ..++.++|||||||++|||++|+.||+.....+ ...
T Consensus 170 ~~~~~~~~~-----~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~~--~~~---------- 232 (283)
T PHA02988 170 EKILSSPPF-----KNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTKE--IYD---------- 232 (283)
T ss_pred Hhhhccccc-----cccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCHHH--HHH----------
Confidence 986543321 2358899999999876 678999999999999999999999996432111 000
Q ss_pred hhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHHhHH
Q 039533 866 MDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHELQSIKN 933 (949)
Q Consensus 866 ~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~~ 933 (949)
.+....... .....++..+.+++.+||+.||++|||++|+++.|+.++.
T Consensus 233 -~i~~~~~~~------------------~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~l~~~~~ 281 (283)
T PHA02988 233 -LIINKNNSL------------------KLPLDCPLEIKCIVEACTSHDSIKRPNIKEILYNLSLYKF 281 (283)
T ss_pred -HHHhcCCCC------------------CCCCcCcHHHHHHHHHHhcCCcccCcCHHHHHHHHHHHHh
Confidence 000000000 0001345578899999999999999999999999998753
No 41
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-38 Score=359.53 Aligned_cols=265 Identities=20% Similarity=0.247 Sum_probs=212.5
Q ss_pred cCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCCcchHHHHHHHHHHHhcC-CCcceeEEee-eecccccC-Ccc
Q 039533 626 SGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHGASRSFIAECKALKSIR-HRNLVKVLTA-CLGADYRG-NDF 702 (949)
Q Consensus 626 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~-~~~~~~~~-~~~ 702 (949)
.++++.+.|.+|||+.||.|++...+..||+|++-..++...+.+.+|+++|++++ |+|||.+++. .....-.+ ..+
T Consensus 37 ~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~~E 116 (738)
T KOG1989|consen 37 HRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGVWE 116 (738)
T ss_pred EEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCceeE
Confidence 45677899999999999999999777999999998777777889999999999996 9999999993 32221122 356
Q ss_pred ceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEE
Q 039533 703 KASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARV 782 (949)
Q Consensus 703 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl 782 (949)
+++.||||++|.|-+++... -...+++.++++|+.|+++|+++||.. +++|||||||-+||||+.+++.||
T Consensus 117 vllLmEyC~gg~Lvd~mn~R--------lq~~lte~eVLkIf~dv~~AVa~mH~~-~pPiIHRDLKiENvLls~~g~~KL 187 (738)
T KOG1989|consen 117 VLLLMEYCKGGSLVDFMNTR--------LQTRLTEDEVLKIFYDVCEAVAAMHYL-KPPIIHRDLKIENVLLSADGNYKL 187 (738)
T ss_pred EEeehhhccCCcHHHHHHHH--------HhccCChHHHHHHHHHHHHHHHHHhcC-CCccchhhhhhhheEEcCCCCEEe
Confidence 88999999999999999621 223499999999999999999999988 899999999999999999999999
Q ss_pred eecccceecCCCCCccc-------cccccCccCccCcccc---CCCccCCccchHHHHHHHHHHHhCCCCCccccccCch
Q 039533 783 GDFGLARILSPDHTQTS-------SFSVKGSLGYIAPEYG---VGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDIN 852 (949)
Q Consensus 783 ~DfG~a~~~~~~~~~~~-------~~~~~gt~~y~aPE~~---~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~ 852 (949)
||||.|.......+... ......|+.|+|||++ .+..+++|+|||+|||+||-|+....||+....-.
T Consensus 188 CDFGSatt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~la-- 265 (738)
T KOG1989|consen 188 CDFGSATTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGKLA-- 265 (738)
T ss_pred CcccccccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCccee--
Confidence 99999975433331110 1123479999999974 46789999999999999999999999997431111
Q ss_pred hhhhccccCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHHhH
Q 039533 853 LHNFGRKALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHELQSIK 932 (949)
Q Consensus 853 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~ 932 (949)
+++... .++....+...+.+||+.||+.||++||++.||++.+.++.
T Consensus 266 ---------------Ilng~Y------------------~~P~~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~l~ 312 (738)
T KOG1989|consen 266 ---------------ILNGNY------------------SFPPFPNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIFELA 312 (738)
T ss_pred ---------------EEeccc------------------cCCCCccHHHHHHHHHHHHhccCcccCCCHHHHHHHHHHHh
Confidence 111111 11111255678999999999999999999999999999987
Q ss_pred Hh
Q 039533 933 NI 934 (949)
Q Consensus 933 ~~ 934 (949)
..
T Consensus 313 ~~ 314 (738)
T KOG1989|consen 313 NK 314 (738)
T ss_pred cC
Confidence 65
No 42
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=100.00 E-value=7e-39 Score=327.56 Aligned_cols=286 Identities=21% Similarity=0.259 Sum_probs=203.8
Q ss_pred CCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCCcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCccceeE
Q 039533 627 GFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFKASV 706 (949)
Q Consensus 627 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv 706 (949)
.|...+++|.|+||.||+|....+++.||||++-.... --.+|+++|++++|||||++.-+|......++-...+|
T Consensus 25 ~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r----~knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnlV 100 (364)
T KOG0658|consen 25 SYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKR----YKNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNLV 100 (364)
T ss_pred EEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCC----cCcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHHH
Confidence 35667899999999999999998899999999854432 22479999999999999999988876543333456789
Q ss_pred eeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCC-CceEEeec
Q 039533 707 YEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDY-MTARVGDF 785 (949)
Q Consensus 707 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~-~~~kl~Df 785 (949)
||||+. +|+++++.+. ..+..++...+.-++.|+.+||+|||+. +|+||||||.|+|+|.+ |.+|||||
T Consensus 101 leymP~-tL~~~~r~~~------~~~~~mp~~~iKLYt~Qlfrgl~yLh~~---~IcHRDIKPqNlLvD~~tg~LKicDF 170 (364)
T KOG0658|consen 101 LEYMPE-TLYRVIRHYT------RANQRMPLLEIKLYTYQLFRGLAYLHSH---GICHRDIKPQNLLVDPDTGVLKICDF 170 (364)
T ss_pred HHhchH-HHHHHHHHHh------hcCCCCceeeeHHHHHHHHHHHHHHHhc---CcccCCCChheEEEcCCCCeEEeccC
Confidence 999975 9999987432 2345678888899999999999999976 99999999999999965 99999999
Q ss_pred ccceecCCCCCccccccccCccCccCccccCCC-ccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhccccCCCc
Q 039533 786 GLARILSPDHTQTSSFSVKGSLGYIAPEYGVGC-EVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKALPDD 864 (949)
Q Consensus 786 G~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~ 864 (949)
|.|+....+.... ....|..|+|||.+.+. .|+.+.||||.|||+.||+-|++-|...... ..++... +.+...
T Consensus 171 GSAK~L~~~epni---SYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~-dQL~eIi-k~lG~P 245 (364)
T KOG0658|consen 171 GSAKVLVKGEPNI---SYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSV-DQLVEII-KVLGTP 245 (364)
T ss_pred CcceeeccCCCce---eEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHH-HHHHHHH-HHhCCC
Confidence 9999987776643 34589999999998876 5999999999999999999999998643211 1111111 111111
Q ss_pred hhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH--HHHHhHH
Q 039533 865 VMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVH--ELQSIKN 933 (949)
Q Consensus 865 ~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~--~L~~i~~ 933 (949)
..+-+..+.... .+.........+..+ -.....+.+..+++.+++..+|.+|.++.|++. ..+++++
T Consensus 246 t~e~I~~mn~~y-~~~~~p~ik~~~~~~-~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~h~fFdelr~ 314 (364)
T KOG0658|consen 246 TREDIKSMNPNY-TEFKFPQIKAHPWHK-VFFKRLPPDALDLLSKLLQYSPSKRLSALEALAHPFFDELRD 314 (364)
T ss_pred CHHHHhhcCccc-ccccCccccccccee-ecccCCCHHHHHHHHHHhccChhhcCCHHHHhcchhhHHhhC
Confidence 001110000000 000000000000000 011244567889999999999999999999874 3444443
No 43
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=3.7e-38 Score=329.70 Aligned_cols=281 Identities=25% Similarity=0.314 Sum_probs=209.7
Q ss_pred CCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCCcchHHHHHHHHHHHh--cCCCcceeEEeeeecccccCCccce
Q 039533 627 GFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHGASRSFIAECKALKS--IRHRNLVKVLTACLGADYRGNDFKA 704 (949)
Q Consensus 627 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~~~~~~~~~~~~~~~~~~ 704 (949)
.....+++|+|+||.||+|... ++.||||++.... .+.|++|-++.+. ++|+||++++++-...+-. ...++
T Consensus 211 pl~l~eli~~Grfg~V~KaqL~--~~~VAVKifp~~~---kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~-~~eyw 284 (534)
T KOG3653|consen 211 PLQLLELIGRGRFGCVWKAQLD--NRLVAVKIFPEQE---KQSFQNEKNIYSLPGMKHENILQFIGAEKRGTAD-RMEYW 284 (534)
T ss_pred chhhHHHhhcCccceeehhhcc--CceeEEEecCHHH---HHHHHhHHHHHhccCccchhHHHhhchhccCCcc-cccee
Confidence 3455688999999999999997 6999999996443 4567888777766 4899999999885443322 45789
Q ss_pred eEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhC------CCCCeEecCCCCCCeeecCCC
Q 039533 705 SVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHD------CQPVTAHCDLKPSNVLLDDYM 778 (949)
Q Consensus 705 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~------~~~~ivHrDlkp~NIll~~~~ 778 (949)
+|++|.+.|+|.+|++ ...++|....+|+..+++||+|||+. ++++|+|||||++||||..|+
T Consensus 285 LVt~fh~kGsL~dyL~-----------~ntisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~Dl 353 (534)
T KOG3653|consen 285 LVTEFHPKGSLCDYLK-----------ANTISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDL 353 (534)
T ss_pred EEeeeccCCcHHHHHH-----------hccccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCC
Confidence 9999999999999997 35699999999999999999999975 378999999999999999999
Q ss_pred ceEEeecccceecCCCCCccccccccCccCccCccccCCCc------cCCccchHHHHHHHHHHHhCCCCCcc--ccccC
Q 039533 779 TARVGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCE------VSTNGDVYSYGILLLELVIGKKPIDI--MFEGD 850 (949)
Q Consensus 779 ~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~------~~~~sDiwSlGvvl~elltg~~Pf~~--~~~~~ 850 (949)
++.|+|||+|..+.+..........+||.+|||||++.+.. .-.+.||||+|.|+|||++.-.-++. ..+..
T Consensus 354 TccIaDFGLAl~~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yq 433 (534)
T KOG3653|consen 354 TCCIADFGLALRLEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQ 433 (534)
T ss_pred cEEeeccceeEEecCCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCccc
Confidence 99999999999998887766666678999999999988742 12468999999999999986544321 10111
Q ss_pred chhhhhccccC-CCchhh-hcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHH
Q 039533 851 INLHNFGRKAL-PDDVMD-IVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHEL 928 (949)
Q Consensus 851 ~~~~~~~~~~~-~~~~~~-~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L 928 (949)
.-+...+...- -+++.+ ++.+..++...+. |.. ...+..+.+.+..||+.||+.|-|+.=|.+++
T Consensus 434 lpfe~evG~hPt~e~mq~~VV~kK~RP~~p~~------------W~~-h~~~~~l~et~EeCWDhDaeARLTA~Cv~eR~ 500 (534)
T KOG3653|consen 434 LPFEAEVGNHPTLEEMQELVVRKKQRPKIPDA------------WRK-HAGMAVLCETIEECWDHDAEARLTAGCVEERM 500 (534)
T ss_pred CchhHHhcCCCCHHHHHHHHHhhccCCCChhh------------hhc-CccHHHHHHHHHHHcCCchhhhhhhHHHHHHH
Confidence 11111111110 111111 1222222222111 111 13456788999999999999999999999999
Q ss_pred HHhHHhhcc
Q 039533 929 QSIKNILLG 937 (949)
Q Consensus 929 ~~i~~~~~~ 937 (949)
.++....+.
T Consensus 501 ~~l~~~~~~ 509 (534)
T KOG3653|consen 501 AELMMLWED 509 (534)
T ss_pred HHHhccCCc
Confidence 998777653
No 44
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=100.00 E-value=2.1e-37 Score=339.40 Aligned_cols=272 Identities=20% Similarity=0.326 Sum_probs=201.9
Q ss_pred cCCCCCCeeeeecCceEEEEEEcC----------------CCEEEEEEEEecCCC-cchHHHHHHHHHHHhcCCCcceeE
Q 039533 626 SGFSSANLVGVGSFGSVYKGIIDE----------------GRTTIAVKVFNLQHH-GASRSFIAECKALKSIRHRNLVKV 688 (949)
Q Consensus 626 ~~y~~~~~lg~G~~g~Vy~~~~~~----------------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~ 688 (949)
++|.+.++||+|+||.||+|.+.. ++..||+|+++.... ....++.+|++++++++||||+++
T Consensus 5 ~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~ 84 (304)
T cd05096 5 GHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIRL 84 (304)
T ss_pred hhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCeeEE
Confidence 578899999999999999998642 345799999875432 234578999999999999999999
Q ss_pred EeeeecccccCCccceeEeeeccCCChhhhcCCCCCCCcc---------ccCCCCCCHHHHHHHHHHHHHHHHHHhhCCC
Q 039533 689 LTACLGADYRGNDFKASVYEFMHYGSLEEWLHPFTGEDEI---------DEAPRNLNLLQRLNIAIDIAYALNYLHHDCQ 759 (949)
Q Consensus 689 ~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~---------~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~ 759 (949)
++++...+ ..++||||+++|+|.+++......... ......+++.++..++.|++.||+|||+.
T Consensus 85 ~~~~~~~~-----~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~-- 157 (304)
T cd05096 85 LGVCVDED-----PLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSL-- 157 (304)
T ss_pred EEEEecCC-----ceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHC--
Confidence 99986544 689999999999999998642211110 11234578899999999999999999977
Q ss_pred CCeEecCCCCCCeeecCCCceEEeecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHh-
Q 039533 760 PVTAHCDLKPSNVLLDDYMTARVGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVI- 838 (949)
Q Consensus 760 ~~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~ellt- 838 (949)
+|+||||||+||+++.++.+||+|||+++...............++..|+|||++.+..++.++|||||||++|||++
T Consensus 158 -~ivH~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~ 236 (304)
T cd05096 158 -NFVHRDLATRNCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILML 236 (304)
T ss_pred -CccccCcchhheEEcCCccEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHHHc
Confidence 899999999999999999999999999987654433222223346789999999988889999999999999999987
Q ss_pred -CCCCCccccccCchhhhhccccCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCC
Q 039533 839 -GKKPIDIMFEGDINLHNFGRKALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQD 917 (949)
Q Consensus 839 -g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~ 917 (949)
+..||...... .................. ......++..+.+++.+||+.||++
T Consensus 237 ~~~~p~~~~~~~--~~~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~li~~cl~~~p~~ 291 (304)
T cd05096 237 CKEQPYGELTDE--QVIENAGEFFRDQGRQVY-----------------------LFRPPPCPQGLYELMLQCWSRDCRE 291 (304)
T ss_pred cCCCCCCcCCHH--HHHHHHHHHhhhcccccc-----------------------ccCCCCCCHHHHHHHHHHccCCchh
Confidence 55677533211 111000000000000000 0000133567899999999999999
Q ss_pred CCCHHHHHHHHHH
Q 039533 918 RTNMTNVVHELQS 930 (949)
Q Consensus 918 RPs~~ev~~~L~~ 930 (949)
|||+.||.+.|++
T Consensus 292 RPs~~~i~~~l~~ 304 (304)
T cd05096 292 RPSFSDIHAFLTE 304 (304)
T ss_pred CcCHHHHHHHHhC
Confidence 9999999988763
No 45
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=100.00 E-value=6.5e-38 Score=349.20 Aligned_cols=285 Identities=20% Similarity=0.230 Sum_probs=201.1
Q ss_pred CCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCC--CcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCccce
Q 039533 627 GFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQH--HGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFKA 704 (949)
Q Consensus 627 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 704 (949)
+|++.+.||+|+||.||+|++..+++.||||+++... .....++.+|++++++++||||+++++++...........+
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~ 80 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIY 80 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEE
Confidence 5888999999999999999999899999999986432 22345688999999999999999999988655444444689
Q ss_pred eEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEee
Q 039533 705 SVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVGD 784 (949)
Q Consensus 705 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~D 784 (949)
+||||+. ++|.+++. ....+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|
T Consensus 81 lv~e~~~-~~L~~~l~----------~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~~~~~kL~D 146 (338)
T cd07859 81 VVFELME-SDLHQVIK----------ANDDLTPEHHQFFLYQLLRALKYIHTA---NVFHRDLKPKNILANADCKLKICD 146 (338)
T ss_pred EEEecCC-CCHHHHHH----------hcccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCcEEEcc
Confidence 9999995 68998886 234588999999999999999999977 899999999999999999999999
Q ss_pred cccceecCCCCC-ccccccccCccCccCccccCC--CccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhccccC
Q 039533 785 FGLARILSPDHT-QTSSFSVKGSLGYIAPEYGVG--CEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKAL 861 (949)
Q Consensus 785 fG~a~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~--~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~ 861 (949)
||+++....... ........||..|+|||++.+ ..++.++|||||||++|||++|+.||...... ..........
T Consensus 147 fg~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~--~~~~~~~~~~ 224 (338)
T cd07859 147 FGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVV--HQLDLITDLL 224 (338)
T ss_pred CccccccccccCccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChH--HHHHHHHHHh
Confidence 999986533222 111123468999999999865 57899999999999999999999999643211 0000000000
Q ss_pred CCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHH
Q 039533 862 PDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHE 927 (949)
Q Consensus 862 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 927 (949)
.....+.....................+..........+..+.+++.+|++.||++|||++|+++.
T Consensus 225 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~h 290 (338)
T cd07859 225 GTPSPETISRVRNEKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALAD 290 (338)
T ss_pred CCCCHHHHHHhhhhhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhcC
Confidence 000000000000000000000000000000000011234567899999999999999999999864
No 46
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=100.00 E-value=1.2e-37 Score=349.77 Aligned_cols=268 Identities=25% Similarity=0.376 Sum_probs=203.5
Q ss_pred cCCCCCCeeeeecCceEEEEEEcC-----CCEEEEEEEEecCCC-cchHHHHHHHHHHHhc-CCCcceeEEeeeeccccc
Q 039533 626 SGFSSANLVGVGSFGSVYKGIIDE-----GRTTIAVKVFNLQHH-GASRSFIAECKALKSI-RHRNLVKVLTACLGADYR 698 (949)
Q Consensus 626 ~~y~~~~~lg~G~~g~Vy~~~~~~-----~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~ 698 (949)
++|++.+.||+|+||.||+|++.. ++..||+|+++.... .....+.+|+++++++ +|+||++++++|...+
T Consensus 38 ~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~~-- 115 (374)
T cd05106 38 DNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGACTHGG-- 115 (374)
T ss_pred HHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEecCCC--
Confidence 478999999999999999998643 335799999975432 2345688999999999 8999999999976554
Q ss_pred CCccceeEeeeccCCChhhhcCCCCCC-----------------------------------------------------
Q 039533 699 GNDFKASVYEFMHYGSLEEWLHPFTGE----------------------------------------------------- 725 (949)
Q Consensus 699 ~~~~~~lv~e~~~~gsL~~~l~~~~~~----------------------------------------------------- 725 (949)
..++||||+++|+|.+++......
T Consensus 116 ---~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (374)
T cd05106 116 ---PVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSS 192 (374)
T ss_pred ---CeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCcccccc
Confidence 789999999999999998532110
Q ss_pred -------CccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEeecccceecCCCCCcc
Q 039533 726 -------DEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVGDFGLARILSPDHTQT 798 (949)
Q Consensus 726 -------~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~ 798 (949)
.........+++.++++|+.|++.||+|||++ +|+||||||+||++++++.+||+|||+++.........
T Consensus 193 ~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~---giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~~~ 269 (374)
T cd05106 193 QSSDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASK---NCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNYV 269 (374)
T ss_pred ccccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CEEeccCchheEEEeCCCeEEEeeceeeeeccCCccee
Confidence 00001123588999999999999999999977 99999999999999999999999999998764433222
Q ss_pred ccccccCccCccCccccCCCccCCccchHHHHHHHHHHHh-CCCCCccccccCchhhhhccccCCCchhhhcccCCCCCc
Q 039533 799 SSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVI-GKKPIDIMFEGDINLHNFGRKALPDDVMDIVDSSLLPDD 877 (949)
Q Consensus 799 ~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 877 (949)
......++..|+|||++.+..++.++|||||||++|||++ |+.||....... .. ...+........
T Consensus 270 ~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~-~~------------~~~~~~~~~~~~ 336 (374)
T cd05106 270 VKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNS-KF------------YKMVKRGYQMSR 336 (374)
T ss_pred eccCCCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccccH-HH------------HHHHHcccCccC
Confidence 2222335678999999988899999999999999999997 999996432111 00 111110000000
Q ss_pred hhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHHhH
Q 039533 878 EDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHELQSIK 932 (949)
Q Consensus 878 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~ 932 (949)
....+..+.+++.+||+.||++|||+.||++.|+++.
T Consensus 337 ------------------~~~~~~~l~~li~~cl~~dp~~RPs~~~l~~~l~~~~ 373 (374)
T cd05106 337 ------------------PDFAPPEIYSIMKMCWNLEPTERPTFSQISQLIQRQL 373 (374)
T ss_pred ------------------CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHh
Confidence 0012456789999999999999999999999999863
No 47
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.1e-37 Score=321.59 Aligned_cols=271 Identities=24% Similarity=0.370 Sum_probs=204.7
Q ss_pred cCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCCcchHHHHHHHHHHHhc--CCCcceeEEeeeecccccCCccc
Q 039533 626 SGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHGASRSFIAECKALKSI--RHRNLVKVLTACLGADYRGNDFK 703 (949)
Q Consensus 626 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l--~h~niv~~~~~~~~~~~~~~~~~ 703 (949)
...+..+.||+|.||.||+|.++ |+.||||++...+ ++.+.+|.++.+.+ +|+||+.+++.-.... ......
T Consensus 211 rqI~L~e~IGkGRyGEVwrG~wr--Ge~VAVKiF~srd---E~SWfrEtEIYqTvmLRHENILgFIaaD~~~~-gs~TQL 284 (513)
T KOG2052|consen 211 RQIVLQEIIGKGRFGEVWRGRWR--GEDVAVKIFSSRD---ERSWFRETEIYQTVMLRHENILGFIAADNKDN-GSWTQL 284 (513)
T ss_pred heeEEEEEecCccccceeecccc--CCceEEEEecccc---hhhhhhHHHHHHHHHhccchhhhhhhccccCC-CceEEE
Confidence 34566689999999999999998 7899999996443 45677888877765 9999999987743222 233457
Q ss_pred eeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhC-----CCCCeEecCCCCCCeeecCCC
Q 039533 704 ASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHD-----CQPVTAHCDLKPSNVLLDDYM 778 (949)
Q Consensus 704 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~-----~~~~ivHrDlkp~NIll~~~~ 778 (949)
++|++|.+.|||+|||. ...++....++++..+|.||+|||.. .+|.|+|||||+.||||..++
T Consensus 285 wLvTdYHe~GSL~DyL~-----------r~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~ 353 (513)
T KOG2052|consen 285 WLVTDYHEHGSLYDYLN-----------RNTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNG 353 (513)
T ss_pred EEeeecccCCcHHHHHh-----------hccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCC
Confidence 99999999999999997 25589999999999999999999964 489999999999999999999
Q ss_pred ceEEeecccceecCCCCC--ccccccccCccCccCccccCCC------ccCCccchHHHHHHHHHHHhC----------C
Q 039533 779 TARVGDFGLARILSPDHT--QTSSFSVKGSLGYIAPEYGVGC------EVSTNGDVYSYGILLLELVIG----------K 840 (949)
Q Consensus 779 ~~kl~DfG~a~~~~~~~~--~~~~~~~~gt~~y~aPE~~~~~------~~~~~sDiwSlGvvl~elltg----------~ 840 (949)
.+.|+|+|+|........ .......+||.+|||||++... ..-..+||||||.|+||+... +
T Consensus 354 ~C~IADLGLAv~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~ 433 (513)
T KOG2052|consen 354 TCCIADLGLAVRHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQ 433 (513)
T ss_pred cEEEeeceeeEEecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhc
Confidence 999999999987765532 1222356799999999997653 223569999999999999763 3
Q ss_pred CCCccccccCchhhhhccccCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCC
Q 039533 841 KPIDIMFEGDINLHNFGRKALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTN 920 (949)
Q Consensus 841 ~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs 920 (949)
.||.+..+.+..+.+...- +..+.+.+... .+|. ..++...+.++++.||..+|.-|-|
T Consensus 434 ~Pyyd~Vp~DPs~eeMrkV--------VCv~~~RP~ip------------nrW~-s~~~l~~m~klMkeCW~~Np~aRlt 492 (513)
T KOG2052|consen 434 LPYYDVVPSDPSFEEMRKV--------VCVQKLRPNIP------------NRWK-SDPALRVMAKLMKECWYANPAARLT 492 (513)
T ss_pred CCcccCCCCCCCHHHHhcc--------eeecccCCCCC------------cccc-cCHHHHHHHHHHHHhhcCCchhhhH
Confidence 5665444443333222111 11112222211 1111 1356778999999999999999999
Q ss_pred HHHHHHHHHHhHHh
Q 039533 921 MTNVVHELQSIKNI 934 (949)
Q Consensus 921 ~~ev~~~L~~i~~~ 934 (949)
+--+.+.|.++.+.
T Consensus 493 ALriKKtl~~l~~~ 506 (513)
T KOG2052|consen 493 ALRIKKTLAKLSNS 506 (513)
T ss_pred HHHHHHHHHHHhcC
Confidence 99999999998754
No 48
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=100.00 E-value=2.5e-37 Score=347.55 Aligned_cols=266 Identities=24% Similarity=0.355 Sum_probs=202.7
Q ss_pred cCCCCCCeeeeecCceEEEEEE-----cCCCEEEEEEEEecCC-CcchHHHHHHHHHHHhc-CCCcceeEEeeeeccccc
Q 039533 626 SGFSSANLVGVGSFGSVYKGII-----DEGRTTIAVKVFNLQH-HGASRSFIAECKALKSI-RHRNLVKVLTACLGADYR 698 (949)
Q Consensus 626 ~~y~~~~~lg~G~~g~Vy~~~~-----~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~ 698 (949)
++|++.+.||+|+||.||+|++ ..++..||||+++... ....+.+.+|+++++.+ +||||++++++|...+
T Consensus 35 ~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~~-- 112 (375)
T cd05104 35 NRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACTVGG-- 112 (375)
T ss_pred HHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeeeccCC--
Confidence 4689999999999999999975 3356789999987443 23345788999999999 8999999999976554
Q ss_pred CCccceeEeeeccCCChhhhcCCCCCCCc---------------------------------------------------
Q 039533 699 GNDFKASVYEFMHYGSLEEWLHPFTGEDE--------------------------------------------------- 727 (949)
Q Consensus 699 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~--------------------------------------------------- 727 (949)
..++||||+++|+|.+++........
T Consensus 113 ---~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 189 (375)
T cd05104 113 ---PTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSV 189 (375)
T ss_pred ---cceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCccccccccccccccc
Confidence 78999999999999999864221000
Q ss_pred --------------cccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEeecccceecCC
Q 039533 728 --------------IDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVGDFGLARILSP 793 (949)
Q Consensus 728 --------------~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~ 793 (949)
.......+++..+..++.||+.||+|||+. +|+||||||+||++++++.+||+|||+++....
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~ 266 (375)
T cd05104 190 RSGSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASK---NCIHRDLAARNILLTHGRITKICDFGLARDIRN 266 (375)
T ss_pred ccceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCchhhEEEECCCcEEEecCccceeccC
Confidence 001123578999999999999999999977 999999999999999999999999999987654
Q ss_pred CCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHh-CCCCCccccccCchhhhhccccCCCchhhhcccC
Q 039533 794 DHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVI-GKKPIDIMFEGDINLHNFGRKALPDDVMDIVDSS 872 (949)
Q Consensus 794 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 872 (949)
...........++..|+|||++.+..++.++|||||||++|||++ |..||....... .. .+.+...
T Consensus 267 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~-~~------------~~~~~~~ 333 (375)
T cd05104 267 DSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDS-KF------------YKMIKEG 333 (375)
T ss_pred cccccccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchH-HH------------HHHHHhC
Confidence 332222222335678999999999999999999999999999998 888986432111 11 1111110
Q ss_pred CCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHH
Q 039533 873 LLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHELQS 930 (949)
Q Consensus 873 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~ 930 (949)
..... ....+.++.+++.+|++.||++|||++||++.|++
T Consensus 334 ~~~~~------------------~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~l~~ 373 (375)
T cd05104 334 YRMLS------------------PECAPSEMYDIMKSCWDADPLKRPTFKQIVQLIEQ 373 (375)
T ss_pred ccCCC------------------CCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHh
Confidence 00000 00123468899999999999999999999999986
No 49
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=3.7e-37 Score=341.07 Aligned_cols=200 Identities=26% Similarity=0.354 Sum_probs=174.5
Q ss_pred hcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCC-cchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCccc
Q 039533 625 TSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHH-GASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFK 703 (949)
Q Consensus 625 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 703 (949)
.++|++.+.||+|+||.||+|++..++..||+|+++.... ...+++.+|++++++++||||+++++++...+ ..
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-----~~ 78 (331)
T cd06649 4 DDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDG-----EI 78 (331)
T ss_pred cccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECC-----EE
Confidence 3689999999999999999999998999999999875432 23467899999999999999999999976544 78
Q ss_pred eeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEe
Q 039533 704 ASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVG 783 (949)
Q Consensus 704 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~ 783 (949)
++||||+++++|.+++.. ...+++..+..++.|++.||+|||+.. +|+||||||+||+++.++.+||+
T Consensus 79 ~lv~e~~~~~~L~~~l~~----------~~~~~~~~~~~~~~~i~~~l~~lH~~~--~ivH~dlkp~Nil~~~~~~~kl~ 146 (331)
T cd06649 79 SICMEHMDGGSLDQVLKE----------AKRIPEEILGKVSIAVLRGLAYLREKH--QIMHRDVKPSNILVNSRGEIKLC 146 (331)
T ss_pred EEEeecCCCCcHHHHHHH----------cCCCCHHHHHHHHHHHHHHHHHHhhcC--CEEcCCCChhhEEEcCCCcEEEc
Confidence 999999999999999862 345888999999999999999999753 69999999999999999999999
Q ss_pred ecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCcc
Q 039533 784 DFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDI 845 (949)
Q Consensus 784 DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~ 845 (949)
|||++........ ....|+..|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 147 Dfg~~~~~~~~~~----~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~ 204 (331)
T cd06649 147 DFGVSGQLIDSMA----NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPP 204 (331)
T ss_pred cCccccccccccc----ccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCC
Confidence 9999976543221 134589999999999998999999999999999999999999964
No 50
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=100.00 E-value=2.7e-37 Score=334.94 Aligned_cols=252 Identities=22% Similarity=0.268 Sum_probs=197.7
Q ss_pred CCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCC---cchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCccc
Q 039533 627 GFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHH---GASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFK 703 (949)
Q Consensus 627 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 703 (949)
.|+..+.||+|+||.||+|.+..+++.||+|++..... .....+.+|+.++++++|++|+++++++...+ ..
T Consensus 1 ~f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~-----~~ 75 (285)
T cd05631 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKD-----AL 75 (285)
T ss_pred CceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCC-----eE
Confidence 37778999999999999999988999999999864322 22346788999999999999999998875444 78
Q ss_pred eeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEe
Q 039533 704 ASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVG 783 (949)
Q Consensus 704 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~ 783 (949)
++||||+++|+|.+++... ....+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+
T Consensus 76 ~lv~e~~~~g~L~~~~~~~--------~~~~~~~~~~~~~~~qi~~~l~~lH~~---~iiH~dikp~Nill~~~~~~kl~ 144 (285)
T cd05631 76 CLVLTIMNGGDLKFHIYNM--------GNPGFDEQRAIFYAAELCCGLEDLQRE---RIVYRDLKPENILLDDRGHIRIS 144 (285)
T ss_pred EEEEEecCCCcHHHHHHhh--------CCCCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHEEECCCCCEEEe
Confidence 9999999999999887521 123588999999999999999999977 99999999999999999999999
Q ss_pred ecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhccccCCC
Q 039533 784 DFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKALPD 863 (949)
Q Consensus 784 DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~ 863 (949)
|||++......... ....||..|+|||++.+..++.++|||||||++|||++|+.||........
T Consensus 145 Dfg~~~~~~~~~~~---~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~------------ 209 (285)
T cd05631 145 DLGLAVQIPEGETV---RGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVK------------ 209 (285)
T ss_pred eCCCcEEcCCCCee---cCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcchh------------
Confidence 99999876433222 134589999999999999999999999999999999999999964321100
Q ss_pred chhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCC-----HHHHHH
Q 039533 864 DVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTN-----MTNVVH 926 (949)
Q Consensus 864 ~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs-----~~ev~~ 926 (949)
.+.++....... .......+..+.+++.+|++.||++||+ ++|+++
T Consensus 210 --~~~~~~~~~~~~---------------~~~~~~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~ 260 (285)
T cd05631 210 --REEVDRRVKEDQ---------------EEYSEKFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQ 260 (285)
T ss_pred --HHHHHHHhhccc---------------ccCCccCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhc
Confidence 000000000000 0000123456789999999999999997 788876
No 51
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=100.00 E-value=3.5e-37 Score=334.82 Aligned_cols=280 Identities=21% Similarity=0.240 Sum_probs=201.4
Q ss_pred cCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCC--CcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCccc
Q 039533 626 SGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQH--HGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFK 703 (949)
Q Consensus 626 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 703 (949)
++|++.+.||+|+||.||+|++..+++.||+|+++... ....+.+.+|++++++++||||+++++++...+ ..
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-----~~ 75 (287)
T cd07848 1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRRG-----KL 75 (287)
T ss_pred CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecCC-----EE
Confidence 47899999999999999999999889999999997543 223467889999999999999999998875443 78
Q ss_pred eeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEe
Q 039533 704 ASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVG 783 (949)
Q Consensus 704 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~ 783 (949)
++||||++++.+..+.. ....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+
T Consensus 76 ~lv~e~~~~~~l~~~~~----------~~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dlkp~Nill~~~~~~kl~ 142 (287)
T cd07848 76 YLVFEYVEKNMLELLEE----------MPNGVPPEKVRSYIYQLIKAIHWCHKN---DIVHRDIKPENLLISHNDVLKLC 142 (287)
T ss_pred EEEEecCCCCHHHHHHh----------cCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcEEEe
Confidence 99999999887765543 234588999999999999999999977 99999999999999999999999
Q ss_pred ecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccccccCchh-hhhccccCC
Q 039533 784 DFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINL-HNFGRKALP 862 (949)
Q Consensus 784 DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~-~~~~~~~~~ 862 (949)
|||.++......... .....|+..|+|||++.+..++.++|||||||++|||++|+.||......+... ........+
T Consensus 143 Dfg~~~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~ 221 (287)
T cd07848 143 DFGFARNLSEGSNAN-YTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLP 221 (287)
T ss_pred eccCccccccccccc-ccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCC
Confidence 999998764332211 123458999999999998889999999999999999999999997432211100 000001111
Q ss_pred CchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 039533 863 DDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVH 926 (949)
Q Consensus 863 ~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 926 (949)
.......... +........................+..+.+++.+|++.||++|||++|+++
T Consensus 222 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~ 283 (287)
T cd07848 222 AEQMKLFYSN--PRFHGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLN 283 (287)
T ss_pred HHHHHhhhcc--chhcccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 1100000000 0000000000000000000001124567899999999999999999999875
No 52
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=8.9e-38 Score=342.15 Aligned_cols=261 Identities=25% Similarity=0.386 Sum_probs=205.7
Q ss_pred cCCCCCCeeeeecCceEEEEEEcCCC----EEEEEEEEecCC---CcchHHHHHHHHHHHhcCCCcceeEEeeeeccccc
Q 039533 626 SGFSSANLVGVGSFGSVYKGIIDEGR----TTIAVKVFNLQH---HGASRSFIAECKALKSIRHRNLVKVLTACLGADYR 698 (949)
Q Consensus 626 ~~y~~~~~lg~G~~g~Vy~~~~~~~~----~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 698 (949)
++-...++||+|+||.||+|+....+ ..||||..+... .....++.+|++++++++|||||++||++....
T Consensus 157 ~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~~~~-- 234 (474)
T KOG0194|consen 157 SDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAVLEE-- 234 (474)
T ss_pred cCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcCCC--
Confidence 34455689999999999999997532 238999987522 445678999999999999999999999987665
Q ss_pred CCccceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCC
Q 039533 699 GNDFKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYM 778 (949)
Q Consensus 699 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~ 778 (949)
..++|||+|.||+|.+||+.. ...++..++..++.++|.||+|||++ +++||||-.+|+|++.++
T Consensus 235 ---Pl~ivmEl~~gGsL~~~L~k~---------~~~v~~~ek~~~~~~AA~Gl~YLh~k---~~IHRDIAARNcL~~~~~ 299 (474)
T KOG0194|consen 235 ---PLMLVMELCNGGSLDDYLKKN---------KKSLPTLEKLRFCYDAARGLEYLHSK---NCIHRDIAARNCLYSKKG 299 (474)
T ss_pred ---ccEEEEEecCCCcHHHHHHhC---------CCCCCHHHHHHHHHHHHhHHHHHHHC---CCcchhHhHHHheecCCC
Confidence 789999999999999999832 23589999999999999999999977 899999999999999999
Q ss_pred ceEEeecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHh-CCCCCccccccCchhhhhc
Q 039533 779 TARVGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVI-GKKPIDIMFEGDINLHNFG 857 (949)
Q Consensus 779 ~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~ellt-g~~Pf~~~~~~~~~~~~~~ 857 (949)
.+||+|||+++.-..-.. ......-...|+|||.+....+++++|||||||++||+++ |..||......+ ...+
T Consensus 300 ~vKISDFGLs~~~~~~~~--~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~~--v~~k- 374 (474)
T KOG0194|consen 300 VVKISDFGLSRAGSQYVM--KKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNYE--VKAK- 374 (474)
T ss_pred eEEeCccccccCCcceee--ccccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCHHH--HHHH-
Confidence 999999999876431111 1111234678999999999999999999999999999999 898986442221 1101
Q ss_pred cccCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHHhHHhhc
Q 039533 858 RKALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHELQSIKNILL 936 (949)
Q Consensus 858 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~~~~~ 936 (949)
++.... +.+.....+..+..++..||..+|++||+|.+|.+.++.+.....
T Consensus 375 ----------I~~~~~------------------r~~~~~~~p~~~~~~~~~c~~~~p~~R~tm~~i~~~l~~~~~~~~ 425 (474)
T KOG0194|consen 375 ----------IVKNGY------------------RMPIPSKTPKELAKVMKQCWKKDPEDRPTMSTIKKKLEALEKKKE 425 (474)
T ss_pred ----------HHhcCc------------------cCCCCCCCHHHHHHHHHHhccCChhhccCHHHHHHHHHHHHhccc
Confidence 000000 000011346678888999999999999999999999999877655
No 53
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-37 Score=339.69 Aligned_cols=244 Identities=22% Similarity=0.273 Sum_probs=200.1
Q ss_pred HhcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCC---CcchHHHHHHHHHHHhc-CCCcceeEEeeeecccccC
Q 039533 624 ATSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQH---HGASRSFIAECKALKSI-RHRNLVKVLTACLGADYRG 699 (949)
Q Consensus 624 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~ 699 (949)
..++|...++||+|.||.|++|..+.+++.+|||++++.. ..+.+..+.|.+++... +||.+++++.+|...+
T Consensus 366 ~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~--- 442 (694)
T KOG0694|consen 366 TLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKE--- 442 (694)
T ss_pred cccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCC---
Confidence 3467899999999999999999999999999999998654 34567788999998888 5999999999966555
Q ss_pred CccceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCc
Q 039533 700 NDFKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMT 779 (949)
Q Consensus 700 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~ 779 (949)
+.++||||+.||++..+.+ ...+++..++-++..|+.||.|||++ +|||||||-+|||+|.+|+
T Consensus 443 --~l~fvmey~~Ggdm~~~~~-----------~~~F~e~rarfyaAev~l~L~fLH~~---~IIYRDlKLdNiLLD~eGh 506 (694)
T KOG0694|consen 443 --HLFFVMEYVAGGDLMHHIH-----------TDVFSEPRARFYAAEVVLGLQFLHEN---GIIYRDLKLDNLLLDTEGH 506 (694)
T ss_pred --eEEEEEEecCCCcEEEEEe-----------cccccHHHHHHHHHHHHHHHHHHHhc---CceeeecchhheEEcccCc
Confidence 9999999999999544443 45699999999999999999999988 9999999999999999999
Q ss_pred eEEeecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhccc
Q 039533 780 ARVGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRK 859 (949)
Q Consensus 780 ~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~ 859 (949)
+||+|||+++..-.... .+..+.||+.|||||++.+..|+.++|.|||||+||||+.|+.||....++
T Consensus 507 ~kiADFGlcKe~m~~g~--~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEe---------- 574 (694)
T KOG0694|consen 507 VKIADFGLCKEGMGQGD--RTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDEE---------- 574 (694)
T ss_pred EEecccccccccCCCCC--ccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCHH----------
Confidence 99999999986542222 223567999999999999999999999999999999999999999643222
Q ss_pred cCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCH
Q 039533 860 ALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNM 921 (949)
Q Consensus 860 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~ 921 (949)
+++|..+..++.- +.-.+.+...++.+++..+|++|-.+
T Consensus 575 -------e~FdsI~~d~~~y----------------P~~ls~ea~~il~~ll~k~p~kRLG~ 613 (694)
T KOG0694|consen 575 -------EVFDSIVNDEVRY----------------PRFLSKEAIAIMRRLLRKNPEKRLGS 613 (694)
T ss_pred -------HHHHHHhcCCCCC----------------CCcccHHHHHHHHHHhccCcccccCC
Confidence 2233323222210 11335567888999999999999876
No 54
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=100.00 E-value=1.5e-37 Score=338.00 Aligned_cols=246 Identities=22% Similarity=0.247 Sum_probs=197.2
Q ss_pred cCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCC---cchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCcc
Q 039533 626 SGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHH---GASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDF 702 (949)
Q Consensus 626 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 702 (949)
++|++.+.||+|+||.||+|.+..+++.||+|++..... ...+.+.+|+.++++++||||+++++++.+. ..
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~-----~~ 75 (291)
T cd05612 1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQ-----RF 75 (291)
T ss_pred CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccC-----Ce
Confidence 478999999999999999999998899999999874321 2345688999999999999999999886543 37
Q ss_pred ceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEE
Q 039533 703 KASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARV 782 (949)
Q Consensus 703 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl 782 (949)
.++||||+++|+|.+++. ....+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||
T Consensus 76 ~~lv~e~~~~~~L~~~~~----------~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~NIli~~~~~~kl 142 (291)
T cd05612 76 LYMLMEYVPGGELFSYLR----------NSGRFSNSTGLFYASEIVCALEYLHSK---EIVYRDLKPENILLDKEGHIKL 142 (291)
T ss_pred EEEEEeCCCCCCHHHHHH----------HcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEEE
Confidence 899999999999999986 234588899999999999999999977 9999999999999999999999
Q ss_pred eecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhccccCC
Q 039533 783 GDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKALP 862 (949)
Q Consensus 783 ~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~ 862 (949)
+|||+++....... ...||+.|+|||++.+..++.++|||||||++|||++|+.||....... ..
T Consensus 143 ~Dfg~~~~~~~~~~-----~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~--~~-------- 207 (291)
T cd05612 143 TDFGFAKKLRDRTW-----TLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNPFG--IY-------- 207 (291)
T ss_pred EecCcchhccCCcc-----cccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH--HH--------
Confidence 99999986543221 3458999999999998889999999999999999999999996331110 00
Q ss_pred CchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCC-----HHHHHHH
Q 039533 863 DDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTN-----MTNVVHE 927 (949)
Q Consensus 863 ~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs-----~~ev~~~ 927 (949)
..+...... . .......+.+++.+|++.||.+||+ ++|+++.
T Consensus 208 ---~~i~~~~~~-~-------------------~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h 254 (291)
T cd05612 208 ---EKILAGKLE-F-------------------PRHLDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKNH 254 (291)
T ss_pred ---HHHHhCCcC-C-------------------CccCCHHHHHHHHHHcCCCHHHccCCccCCHHHHhcC
Confidence 000000000 0 0012345789999999999999995 7777643
No 55
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=100.00 E-value=4.5e-37 Score=336.45 Aligned_cols=202 Identities=28% Similarity=0.424 Sum_probs=170.0
Q ss_pred hcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCC-cchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCccc
Q 039533 625 TSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHH-GASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFK 703 (949)
Q Consensus 625 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 703 (949)
.++|.+.+.||+|+||.||+|++..+++.||||+++.... .....+.+|+.++++++||||+++++++...+ ..
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~-----~~ 78 (303)
T cd07869 4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIHTKE-----TL 78 (303)
T ss_pred cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEecCC-----eE
Confidence 4789999999999999999999998899999999875432 23356788999999999999999999976544 78
Q ss_pred eeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEe
Q 039533 704 ASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVG 783 (949)
Q Consensus 704 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~ 783 (949)
++||||++ ++|.+++.. ....+++..+..++.|++.||+|||++ +|+||||||+||++++++.+||+
T Consensus 79 ~lv~e~~~-~~l~~~~~~---------~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~Nill~~~~~~kl~ 145 (303)
T cd07869 79 TLVFEYVH-TDLCQYMDK---------HPGGLHPENVKLFLFQLLRGLSYIHQR---YILHRDLKPQNLLISDTGELKLA 145 (303)
T ss_pred EEEEECCC-cCHHHHHHh---------CCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEC
Confidence 99999996 688887752 234578889999999999999999977 89999999999999999999999
Q ss_pred ecccceecCCCCCccccccccCccCccCccccCCC-ccCCccchHHHHHHHHHHHhCCCCCccc
Q 039533 784 DFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGC-EVSTNGDVYSYGILLLELVIGKKPIDIM 846 (949)
Q Consensus 784 DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDiwSlGvvl~elltg~~Pf~~~ 846 (949)
|||+++........ .....||+.|+|||++.+. .++.++||||+||++|||++|+.||...
T Consensus 146 Dfg~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~ 207 (303)
T cd07869 146 DFGLARAKSVPSHT--YSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGM 207 (303)
T ss_pred CCCcceeccCCCcc--CCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 99999764332211 1234589999999987654 5789999999999999999999999743
No 56
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=6.8e-38 Score=336.19 Aligned_cols=253 Identities=23% Similarity=0.314 Sum_probs=211.0
Q ss_pred cCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCC--cchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCccc
Q 039533 626 SGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHH--GASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFK 703 (949)
Q Consensus 626 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 703 (949)
++|...+++|+|+||.++.++++.+++.+|+|.+..... ...+...+|+.++++++|||||.+.+.|.+.+ ...
T Consensus 4 ~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~----~~l 79 (426)
T KOG0589|consen 4 DNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDG----QLL 79 (426)
T ss_pred chhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCC----ceE
Confidence 578899999999999999999999999999999975543 23346789999999999999999999876544 348
Q ss_pred eeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEe
Q 039533 704 ASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVG 783 (949)
Q Consensus 704 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~ 783 (949)
+|||+|++||++.+.+... .+..++++.+.+|+.|++.|+.|||++ .|+|||||+.||+++.++.+||+
T Consensus 80 ~Ivm~Y~eGg~l~~~i~~~--------k~~~f~E~~i~~~~~Q~~~av~ylH~~---~iLHRDlK~~Nifltk~~~VkLg 148 (426)
T KOG0589|consen 80 CIVMEYCEGGDLAQLIKEQ--------KGVLFPEERILKWFVQILLAVNYLHEN---RVLHRDLKCANIFLTKDKKVKLG 148 (426)
T ss_pred EEEEeecCCCCHHHHHHHH--------hhccccHHHHHHHHHHHHHHHHHHHhh---hhhcccchhhhhhccccCceeec
Confidence 9999999999999999742 245689999999999999999999977 89999999999999999999999
Q ss_pred ecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhccccCCC
Q 039533 784 DFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKALPD 863 (949)
Q Consensus 784 DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~ 863 (949)
|||+|+.+.+...... .++||+.||+||++.+.+|..|+||||+||++|||++-+++|....-. ..
T Consensus 149 DfGlaK~l~~~~~~a~--tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m~-----~L------- 214 (426)
T KOG0589|consen 149 DFGLAKILNPEDSLAS--TVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASNMS-----EL------- 214 (426)
T ss_pred chhhhhhcCCchhhhh--eecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccchH-----HH-------
Confidence 9999999887653322 577999999999999999999999999999999999999999633111 11
Q ss_pred chhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHH
Q 039533 864 DVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHE 927 (949)
Q Consensus 864 ~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 927 (949)
+.++......+.+ .....++..++..|+..+|+.||++.|++..
T Consensus 215 -i~ki~~~~~~Plp-------------------~~ys~el~~lv~~~l~~~P~~RPsa~~LL~~ 258 (426)
T KOG0589|consen 215 -ILKINRGLYSPLP-------------------SMYSSELRSLVKSMLRKNPEHRPSALELLRR 258 (426)
T ss_pred -HHHHhhccCCCCC-------------------ccccHHHHHHHHHHhhcCCccCCCHHHHhhC
Confidence 1222222222222 2456678999999999999999999999987
No 57
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=100.00 E-value=5.2e-37 Score=329.30 Aligned_cols=256 Identities=21% Similarity=0.331 Sum_probs=200.4
Q ss_pred cCCCCCCeeeeecCceEEEEEEc---CCCEEEEEEEEecCCC-cchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCc
Q 039533 626 SGFSSANLVGVGSFGSVYKGIID---EGRTTIAVKVFNLQHH-GASRSFIAECKALKSIRHRNLVKVLTACLGADYRGND 701 (949)
Q Consensus 626 ~~y~~~~~lg~G~~g~Vy~~~~~---~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 701 (949)
.+|++.+.||+|+||.||+|.+. ..+..||+|+++.... .....+.+|+..+++++||||+++++++...+
T Consensus 5 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~----- 79 (266)
T cd05064 5 KSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGN----- 79 (266)
T ss_pred HHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCC-----
Confidence 46889999999999999999875 3457899999875432 23457889999999999999999999976443
Q ss_pred cceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceE
Q 039533 702 FKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTAR 781 (949)
Q Consensus 702 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~k 781 (949)
..++||||+++|+|.+++.. ....+++.+++.++.|++.||+|||++ +++||||||+||+++.++.+|
T Consensus 80 ~~~lv~e~~~~~~L~~~l~~---------~~~~l~~~~~~~~~~~i~~al~~lH~~---~iiH~dikp~nili~~~~~~~ 147 (266)
T cd05064 80 TMMIVTEYMSNGALDSFLRK---------HEGQLVAGQLMGMLPGLASGMKYLSEM---GYVHKGLAAHKVLVNSDLVCK 147 (266)
T ss_pred CcEEEEEeCCCCcHHHHHHh---------CCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeeccccHhhEEEcCCCcEE
Confidence 78999999999999999862 124588999999999999999999977 899999999999999999999
Q ss_pred EeecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHh-CCCCCccccccCchhhhhcccc
Q 039533 782 VGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVI-GKKPIDIMFEGDINLHNFGRKA 860 (949)
Q Consensus 782 l~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~ellt-g~~Pf~~~~~~~~~~~~~~~~~ 860 (949)
++|||.+......... ......++..|+|||++.+..++.++|||||||++||+++ |+.||......+ ...
T Consensus 148 l~dfg~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~~--~~~----- 219 (266)
T cd05064 148 ISGFRRLQEDKSEAIY-TTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQD--VIK----- 219 (266)
T ss_pred ECCCcccccccccchh-cccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHHH--HHH-----
Confidence 9999987654322211 1112235678999999999899999999999999999875 999986432110 000
Q ss_pred CCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHHh
Q 039533 861 LPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHELQSI 931 (949)
Q Consensus 861 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i 931 (949)
.+.+....+ ....++..+.+++.+||+.+|++||+++|+.+.|+++
T Consensus 220 ------~~~~~~~~~-------------------~~~~~~~~~~~li~~c~~~~p~~RP~~~~i~~~l~~~ 265 (266)
T cd05064 220 ------AVEDGFRLP-------------------APRNCPNLLHQLMLDCWQKERGERPRFSQIHSILSKM 265 (266)
T ss_pred ------HHHCCCCCC-------------------CCCCCCHHHHHHHHHHcCCCchhCCCHHHHHHHHHhh
Confidence 000000000 0113456788999999999999999999999998764
No 58
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=100.00 E-value=3.1e-37 Score=340.52 Aligned_cols=242 Identities=21% Similarity=0.226 Sum_probs=192.7
Q ss_pred CeeeeecCceEEEEEEcCCCEEEEEEEEecCC---CcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCccceeEee
Q 039533 632 NLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQH---HGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFKASVYE 708 (949)
Q Consensus 632 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e 708 (949)
+.||+|+||.||+|++..+++.||+|+++... ......+.+|+.++++++||||+++++++...+ ..++|||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~-----~~~lv~e 75 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHD-----RLCFVME 75 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCC-----EEEEEEe
Confidence 47999999999999999899999999997432 223456788999999999999999998876544 7899999
Q ss_pred eccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEeecccc
Q 039533 709 FMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVGDFGLA 788 (949)
Q Consensus 709 ~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~DfG~a 788 (949)
|+++|+|.+++. ....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 76 ~~~~~~L~~~l~----------~~~~~~~~~~~~~~~qi~~~L~~lH~~---~ivHrDlkp~NIll~~~~~~kl~DfG~a 142 (323)
T cd05571 76 YANGGELFFHLS----------RERVFSEDRARFYGAEIVSALGYLHSC---DVVYRDLKLENLMLDKDGHIKITDFGLC 142 (323)
T ss_pred CCCCCcHHHHHH----------HcCCCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHEEECCCCCEEEeeCCCC
Confidence 999999999986 234588999999999999999999977 9999999999999999999999999998
Q ss_pred eecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhccccCCCchhhh
Q 039533 789 RILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKALPDDVMDI 868 (949)
Q Consensus 789 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~ 868 (949)
+........ .....||+.|+|||++.+..++.++||||+||++|||++|+.||...... .... .+
T Consensus 143 ~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~--~~~~-----------~~ 207 (323)
T cd05571 143 KEGISDGAT--MKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE--KLFE-----------LI 207 (323)
T ss_pred cccccCCCc--ccceecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCHH--HHHH-----------HH
Confidence 754322211 12345999999999999989999999999999999999999999532111 0000 00
Q ss_pred cccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCC-----CHHHHHH
Q 039533 869 VDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRT-----NMTNVVH 926 (949)
Q Consensus 869 ~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----s~~ev~~ 926 (949)
..... .. .......+.+++.+|++.||++|| ++.|+++
T Consensus 208 ~~~~~-~~-------------------p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~ 250 (323)
T cd05571 208 LMEEI-RF-------------------PRTLSPEAKSLLAGLLKKDPKQRLGGGPEDAKEIME 250 (323)
T ss_pred HcCCC-CC-------------------CCCCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHHc
Confidence 00000 00 012345678899999999999999 7888864
No 59
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=100.00 E-value=5.9e-37 Score=332.79 Aligned_cols=277 Identities=21% Similarity=0.284 Sum_probs=197.7
Q ss_pred hcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCC-CcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCccc
Q 039533 625 TSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQH-HGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFK 703 (949)
Q Consensus 625 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 703 (949)
.++|.+.++||+|+||.||+|++..+++.||+|+++... ......+.+|++++++++||||+++++++...+ ..
T Consensus 4 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~-----~~ 78 (288)
T cd07871 4 LETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIHTER-----CL 78 (288)
T ss_pred cccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCC-----eE
Confidence 357999999999999999999999899999999987443 223456789999999999999999999875433 78
Q ss_pred eeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEe
Q 039533 704 ASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVG 783 (949)
Q Consensus 704 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~ 783 (949)
++||||+++ +|.+++.. ....+++..+..++.|++.||+|||++ +|+||||||+||++++++.+||+
T Consensus 79 ~lv~e~~~~-~l~~~l~~---------~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~ 145 (288)
T cd07871 79 TLVFEYLDS-DLKQYLDN---------CGNLMSMHNVKIFMFQLLRGLSYCHKR---KILHRDLKPQNLLINEKGELKLA 145 (288)
T ss_pred EEEEeCCCc-CHHHHHHh---------cCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEC
Confidence 999999975 89988852 223478889999999999999999977 99999999999999999999999
Q ss_pred ecccceecCCCCCccccccccCccCccCccccCC-CccCCccchHHHHHHHHHHHhCCCCCccccccCch--hhhhcccc
Q 039533 784 DFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVG-CEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDIN--LHNFGRKA 860 (949)
Q Consensus 784 DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~--~~~~~~~~ 860 (949)
|||+++........ .....|++.|+|||++.+ ..++.++||||+||++|||++|+.||......+.. ........
T Consensus 146 DfG~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~ 223 (288)
T cd07871 146 DFGLARAKSVPTKT--YSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTP 223 (288)
T ss_pred cCcceeeccCCCcc--ccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCC
Confidence 99999765432221 123458999999998865 46899999999999999999999999643221100 00000000
Q ss_pred CCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 039533 861 LPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVH 926 (949)
Q Consensus 861 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 926 (949)
.++....+.+.. ........ ...................+++.+|++.||.+|||++|+++
T Consensus 224 ~~~~~~~~~~~~---~~~~~~~~--~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~ 284 (288)
T cd07871 224 TEETWPGITSNE---EFRSYLFP--QYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALR 284 (288)
T ss_pred ChHHhhccccch---hhhccccC--ccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 000000000000 00000000 00000000000122345789999999999999999999974
No 60
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=8.5e-38 Score=299.72 Aligned_cols=251 Identities=20% Similarity=0.280 Sum_probs=205.9
Q ss_pred HhcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCC---CcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCC
Q 039533 624 ATSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQH---HGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGN 700 (949)
Q Consensus 624 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 700 (949)
+.++|.+++.||+|.||.||.|+.+.++-.||+|++-+.. .+..+++.+|+++-+.++||||.++|++|.+..
T Consensus 20 ~l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~---- 95 (281)
T KOG0580|consen 20 TLDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSK---- 95 (281)
T ss_pred chhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheeccc----
Confidence 3467899999999999999999999999999999986432 334578999999999999999999999987655
Q ss_pred ccceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCce
Q 039533 701 DFKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTA 780 (949)
Q Consensus 701 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~ 780 (949)
..|+++||...|.++..+... ...++++.....++.|+|.|+.|+|.. +|+||||||+|+|++..+..
T Consensus 96 -riyLilEya~~gel~k~L~~~--------~~~~f~e~~~a~Yi~q~A~Al~y~h~k---~VIhRdiKpenlLlg~~~~l 163 (281)
T KOG0580|consen 96 -RIYLILEYAPRGELYKDLQEG--------RMKRFDEQRAATYIKQLANALLYCHLK---RVIHRDIKPENLLLGSAGEL 163 (281)
T ss_pred -eeEEEEEecCCchHHHHHHhc--------ccccccccchhHHHHHHHHHHHHhccC---CcccCCCCHHHhccCCCCCe
Confidence 899999999999999999732 234577888899999999999999966 89999999999999999999
Q ss_pred EEeecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhcccc
Q 039533 781 RVGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKA 860 (949)
Q Consensus 781 kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~ 860 (949)
||+|||-+...+.... ....||..|.|||+..+..++.++|+|++|+..||++.|.+||+....+ ..+.+...
T Consensus 164 kiAdfGwsV~~p~~kR----~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~~-etYkrI~k-- 236 (281)
T KOG0580|consen 164 KIADFGWSVHAPSNKR----KTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQSHS-ETYKRIRK-- 236 (281)
T ss_pred eccCCCceeecCCCCc----eeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhhhH-HHHHHHHH--
Confidence 9999999876542222 2456999999999999999999999999999999999999999754311 11111100
Q ss_pred CCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHH
Q 039533 861 LPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHE 927 (949)
Q Consensus 861 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 927 (949)
.++.. +...+....+++.+|+..+|.+|.+..||+.-
T Consensus 237 -----~~~~~-------------------------p~~is~~a~dlI~~ll~~~p~~r~~l~~v~~h 273 (281)
T KOG0580|consen 237 -----VDLKF-------------------------PSTISGGAADLISRLLVKNPIERLALTEVMDH 273 (281)
T ss_pred -----ccccC-------------------------CcccChhHHHHHHHHhccCccccccHHHHhhh
Confidence 00001 11334567899999999999999999999864
No 61
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=100.00 E-value=8.4e-37 Score=336.38 Aligned_cols=260 Identities=25% Similarity=0.403 Sum_probs=203.6
Q ss_pred cCCCCCCeeeeecCceEEEEEEcCCCE----EEEEEEEecCC-CcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCC
Q 039533 626 SGFSSANLVGVGSFGSVYKGIIDEGRT----TIAVKVFNLQH-HGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGN 700 (949)
Q Consensus 626 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~----~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 700 (949)
.+|++.+.||+|+||.||+|++..+++ .||+|+++... ....+++.+|+.+++.++||||++++++|...
T Consensus 7 ~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~----- 81 (316)
T cd05108 7 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS----- 81 (316)
T ss_pred hhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC-----
Confidence 568999999999999999999765444 48999986443 23456788999999999999999999998643
Q ss_pred ccceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCce
Q 039533 701 DFKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTA 780 (949)
Q Consensus 701 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~ 780 (949)
..++|+||+++|+|.+++.. ....+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+
T Consensus 82 -~~~~v~e~~~~g~l~~~l~~---------~~~~~~~~~~~~~~~qi~~~L~~LH~~---~iiH~dlkp~Nill~~~~~~ 148 (316)
T cd05108 82 -TVQLITQLMPFGCLLDYVRE---------HKDNIGSQYLLNWCVQIAKGMNYLEER---RLVHRDLAARNVLVKTPQHV 148 (316)
T ss_pred -CceeeeecCCCCCHHHHHHh---------ccccCCHHHHHHHHHHHHHHHHHHHhc---CeeccccchhheEecCCCcE
Confidence 46799999999999999872 224578889999999999999999977 89999999999999999999
Q ss_pred EEeecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHh-CCCCCccccccCchhhhhccc
Q 039533 781 RVGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVI-GKKPIDIMFEGDINLHNFGRK 859 (949)
Q Consensus 781 kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~ellt-g~~Pf~~~~~~~~~~~~~~~~ 859 (949)
||+|||+++...............++..|+|||++.+..++.++|||||||++|||++ |+.||+...... +
T Consensus 149 kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~~--~------ 220 (316)
T cd05108 149 KITDFGLAKLLGADEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE--I------ 220 (316)
T ss_pred EEccccccccccCCCcceeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHH--H------
Confidence 9999999987654433222122334678999999999899999999999999999998 999986431110 0
Q ss_pred cCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHHhHHhh
Q 039533 860 ALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHELQSIKNIL 935 (949)
Q Consensus 860 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~~~~ 935 (949)
..++...... +....++..+.+++.+||+.+|++||++.|++..+.++....
T Consensus 221 ------~~~~~~~~~~------------------~~~~~~~~~~~~li~~cl~~~p~~Rps~~~l~~~l~~~~~~~ 272 (316)
T cd05108 221 ------SSILEKGERL------------------PQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDP 272 (316)
T ss_pred ------HHHHhCCCCC------------------CCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHcCC
Confidence 0111000000 000122345788999999999999999999999999886543
No 62
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=100.00 E-value=3e-37 Score=341.37 Aligned_cols=245 Identities=21% Similarity=0.206 Sum_probs=197.2
Q ss_pred cCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCC---CcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCcc
Q 039533 626 SGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQH---HGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDF 702 (949)
Q Consensus 626 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 702 (949)
++|++.+.||+|+||.||+|++..+++.||+|+++... ....+.+.+|+.++++++||||+++++++...+ .
T Consensus 18 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-----~ 92 (329)
T PTZ00263 18 SDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDEN-----R 92 (329)
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCC-----E
Confidence 57889999999999999999999889999999997432 223457889999999999999999999876544 7
Q ss_pred ceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEE
Q 039533 703 KASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARV 782 (949)
Q Consensus 703 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl 782 (949)
.++||||+++|+|.+++. ....+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||
T Consensus 93 ~~lv~e~~~~~~L~~~l~----------~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~~~~~kl 159 (329)
T PTZ00263 93 VYFLLEFVVGGELFTHLR----------KAGRFPNDVAKFYHAELVLAFEYLHSK---DIIYRDLKPENLLLDNKGHVKV 159 (329)
T ss_pred EEEEEcCCCCChHHHHHH----------HcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHEEECCCCCEEE
Confidence 899999999999999986 234578889999999999999999977 9999999999999999999999
Q ss_pred eecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhccccCC
Q 039533 783 GDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKALP 862 (949)
Q Consensus 783 ~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~ 862 (949)
+|||+++....... ...||+.|+|||++.+..++.++|||||||++|||++|+.||....... ..
T Consensus 160 ~Dfg~~~~~~~~~~-----~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~-----~~----- 224 (329)
T PTZ00263 160 TDFGFAKKVPDRTF-----TLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPFR-----IY----- 224 (329)
T ss_pred eeccCceEcCCCcc-----eecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCHHH-----HH-----
Confidence 99999987644322 3458999999999999889999999999999999999999995321100 00
Q ss_pred CchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCC-----HHHHHH
Q 039533 863 DDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTN-----MTNVVH 926 (949)
Q Consensus 863 ~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs-----~~ev~~ 926 (949)
..+...... .+ ......+.+++.+|++.||++||+ ++|++.
T Consensus 225 ---~~i~~~~~~-~p-------------------~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~ 270 (329)
T PTZ00263 225 ---EKILAGRLK-FP-------------------NWFDGRARDLVKGLLQTDHTKRLGTLKGGVADVKN 270 (329)
T ss_pred ---HHHhcCCcC-CC-------------------CCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhc
Confidence 000000000 00 012345678999999999999997 577653
No 63
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=100.00 E-value=3.4e-37 Score=342.03 Aligned_cols=254 Identities=21% Similarity=0.249 Sum_probs=200.8
Q ss_pred cCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCC---CcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCcc
Q 039533 626 SGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQH---HGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDF 702 (949)
Q Consensus 626 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 702 (949)
++|++.+.||+|+||.||+|++..+++.||+|+++... ....+.+.+|++++.+++||||+++++++...+ .
T Consensus 1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~-----~ 75 (333)
T cd05600 1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDE-----Y 75 (333)
T ss_pred CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCC-----E
Confidence 46899999999999999999999889999999997432 223457889999999999999999999876544 7
Q ss_pred ceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEE
Q 039533 703 KASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARV 782 (949)
Q Consensus 703 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl 782 (949)
.++||||+++|+|.+++. ....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||
T Consensus 76 ~~lv~e~~~g~~L~~~l~----------~~~~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kL 142 (333)
T cd05600 76 LYLAMEYVPGGDFRTLLN----------NLGVLSEDHARFYMAEMFEAVDALHEL---GYIHRDLKPENFLIDASGHIKL 142 (333)
T ss_pred EEEEEeCCCCCCHHHHHH----------HcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCCEEE
Confidence 899999999999999996 234588999999999999999999977 8999999999999999999999
Q ss_pred eecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhccccCC
Q 039533 783 GDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKALP 862 (949)
Q Consensus 783 ~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~ 862 (949)
+|||+++..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||......+. ...... ..
T Consensus 143 ~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~-~~~i~~--~~ 214 (333)
T cd05600 143 TDFGLSKGIVTY-----ANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNET-WENLKY--WK 214 (333)
T ss_pred EeCcCCcccccc-----cCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHHHH-HHHHHh--cc
Confidence 999999865431 1234589999999999998999999999999999999999999964321110 000000 00
Q ss_pred CchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHH
Q 039533 863 DDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHE 927 (949)
Q Consensus 863 ~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 927 (949)
..+......++ ....+..+.+++.+|+..+|++||+++|+++.
T Consensus 215 ----~~~~~~~~~~~------------------~~~~s~~~~~li~~~l~~~~~rr~s~~~ll~h 257 (333)
T cd05600 215 ----ETLQRPVYDDP------------------RFNLSDEAWDLITKLINDPSRRFGSLEDIKNH 257 (333)
T ss_pred ----ccccCCCCCcc------------------ccccCHHHHHHHHHHhhChhhhcCCHHHHHhC
Confidence 00000000000 01234567889999999999999999999864
No 64
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=100.00 E-value=1.1e-36 Score=330.27 Aligned_cols=265 Identities=24% Similarity=0.426 Sum_probs=205.5
Q ss_pred cCCCCCCeeeeecCceEEEEEEcCCC-----EEEEEEEEecCCC-cchHHHHHHHHHHHhcCCCcceeEEeeeecccccC
Q 039533 626 SGFSSANLVGVGSFGSVYKGIIDEGR-----TTIAVKVFNLQHH-GASRSFIAECKALKSIRHRNLVKVLTACLGADYRG 699 (949)
Q Consensus 626 ~~y~~~~~lg~G~~g~Vy~~~~~~~~-----~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 699 (949)
++|++.+.||+|+||.||+|.....+ ..||+|.++.... .....+.+|++++++++||||+++++++....
T Consensus 5 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~--- 81 (283)
T cd05048 5 SAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQ--- 81 (283)
T ss_pred HHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCC---
Confidence 46889999999999999999986544 6799999864432 23356889999999999999999999976443
Q ss_pred CccceeEeeeccCCChhhhcCCCCCCCcc------ccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCee
Q 039533 700 NDFKASVYEFMHYGSLEEWLHPFTGEDEI------DEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVL 773 (949)
Q Consensus 700 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~------~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIl 773 (949)
..+++|||+++++|.+++......... ......+++.+++.++.|++.||+|||+. +++||||||+||+
T Consensus 82 --~~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~---~i~H~dlkp~Nil 156 (283)
T cd05048 82 --PTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSH---HFVHRDLAARNCL 156 (283)
T ss_pred --ceEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccccceEE
Confidence 689999999999999999743211110 11125688999999999999999999977 8999999999999
Q ss_pred ecCCCceEEeecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHh-CCCCCccccccCch
Q 039533 774 LDDYMTARVGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVI-GKKPIDIMFEGDIN 852 (949)
Q Consensus 774 l~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~ellt-g~~Pf~~~~~~~~~ 852 (949)
+++++.+||+|||+++...............++..|+|||++.+..++.++|||||||++|||++ |..||......+
T Consensus 157 ~~~~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~~~-- 234 (283)
T cd05048 157 VGEGLTVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQE-- 234 (283)
T ss_pred EcCCCcEEECCCcceeeccccccccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCHHH--
Confidence 99999999999999986544332222223346788999999988889999999999999999998 999986432111
Q ss_pred hhhhccccCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHH
Q 039533 853 LHNFGRKALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHELQS 930 (949)
Q Consensus 853 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~ 930 (949)
..+.+...... .....++.++.+++.+||+.||++||+++||.+.|++
T Consensus 235 ------------~~~~i~~~~~~------------------~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05048 235 ------------VIEMIRSRQLL------------------PCPEDCPARVYALMIECWNEIPARRPRFKDIHTRLRS 282 (283)
T ss_pred ------------HHHHHHcCCcC------------------CCcccCCHHHHHHHHHHccCChhhCcCHHHHHHHHhc
Confidence 11111100000 0012456788999999999999999999999999975
No 65
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=100.00 E-value=1.2e-36 Score=330.67 Aligned_cols=269 Identities=24% Similarity=0.394 Sum_probs=208.3
Q ss_pred cCCCCCCeeeeecCceEEEEEE-----cCCCEEEEEEEEecCCCcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCC
Q 039533 626 SGFSSANLVGVGSFGSVYKGII-----DEGRTTIAVKVFNLQHHGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGN 700 (949)
Q Consensus 626 ~~y~~~~~lg~G~~g~Vy~~~~-----~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 700 (949)
++|.+.+.||+|+||.||++.. ..++..+|+|.+........+.+.+|++++++++||||+++++++...+
T Consensus 5 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~---- 80 (288)
T cd05093 5 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGD---- 80 (288)
T ss_pred HHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCC----
Confidence 5688999999999999999985 2345679999987655555678999999999999999999999976544
Q ss_pred ccceeEeeeccCCChhhhcCCCCCCCc---cccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCC
Q 039533 701 DFKASVYEFMHYGSLEEWLHPFTGEDE---IDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDY 777 (949)
Q Consensus 701 ~~~~lv~e~~~~gsL~~~l~~~~~~~~---~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~ 777 (949)
..++||||+++++|.+++........ .......+++.+++.++.|++.||+|||++ +++||||||+||+++++
T Consensus 81 -~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~---~i~H~dlkp~Nili~~~ 156 (288)
T cd05093 81 -PLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLATRNCLVGEN 156 (288)
T ss_pred -ccEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccCcceEEEccC
Confidence 78999999999999999963321111 111234589999999999999999999977 89999999999999999
Q ss_pred CceEEeecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHh-CCCCCccccccCchhhhh
Q 039533 778 MTARVGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVI-GKKPIDIMFEGDINLHNF 856 (949)
Q Consensus 778 ~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~ellt-g~~Pf~~~~~~~~~~~~~ 856 (949)
+.+||+|||.++...............++..|+|||++.+..++.++|||||||++|||++ |..||......+ ...
T Consensus 157 ~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~~--~~~- 233 (288)
T cd05093 157 LLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNE--VIE- 233 (288)
T ss_pred CcEEeccCCccccccCCceeecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH--HHH-
Confidence 9999999999986543332222222335778999999998889999999999999999998 999985432111 000
Q ss_pred ccccCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHHhHHh
Q 039533 857 GRKALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHELQSIKNI 934 (949)
Q Consensus 857 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~~~ 934 (949)
.+........+ ...+..+.+++.+|++.+|.+|||+.||.+.|+++..+
T Consensus 234 ----------~i~~~~~~~~~-------------------~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~~l~~~~~~ 282 (288)
T cd05093 234 ----------CITQGRVLQRP-------------------RTCPKEVYDLMLGCWQREPHMRLNIKEIHSLLQNLAKA 282 (288)
T ss_pred ----------HHHcCCcCCCC-------------------CCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHHh
Confidence 00000000000 02234689999999999999999999999999998865
No 66
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=100.00 E-value=1.6e-36 Score=330.26 Aligned_cols=273 Identities=22% Similarity=0.284 Sum_probs=199.4
Q ss_pred cCCCCCCeeeeecCceEEEEEEc-CCCEEEEEEEEecCCC--cchHHHHHHHHHHHhc---CCCcceeEEeeeecccccC
Q 039533 626 SGFSSANLVGVGSFGSVYKGIID-EGRTTIAVKVFNLQHH--GASRSFIAECKALKSI---RHRNLVKVLTACLGADYRG 699 (949)
Q Consensus 626 ~~y~~~~~lg~G~~g~Vy~~~~~-~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l---~h~niv~~~~~~~~~~~~~ 699 (949)
++|++.+.||+|+||.||+|++. .+++.||+|+++.... .....+.+|+.+++++ +||||++++++|.......
T Consensus 1 ~~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~ 80 (290)
T cd07862 1 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDR 80 (290)
T ss_pred CCcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCC
Confidence 47899999999999999999984 3578899999874432 2234566788777766 6999999999987554445
Q ss_pred CccceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCc
Q 039533 700 NDFKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMT 779 (949)
Q Consensus 700 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~ 779 (949)
....++||||++ ++|.+++... ....+++.++..++.|++.||+|||++ +|+||||||+||+++.++.
T Consensus 81 ~~~~~lv~e~~~-~~l~~~~~~~--------~~~~~~~~~~~~i~~qi~~aL~~lH~~---~iiH~dlkp~Nil~~~~~~ 148 (290)
T cd07862 81 ETKLTLVFEHVD-QDLTTYLDKV--------PEPGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQ 148 (290)
T ss_pred CCcEEEEEccCC-CCHHHHHHhC--------CCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEEcCCCC
Confidence 557899999996 6899988621 223588999999999999999999977 9999999999999999999
Q ss_pred eEEeecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhc--
Q 039533 780 ARVGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFG-- 857 (949)
Q Consensus 780 ~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~-- 857 (949)
+||+|||+++....... .....||..|+|||++.+..++.++|||||||++|||++|++||......+ .+....
T Consensus 149 ~kl~Dfg~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~-~~~~i~~~ 224 (290)
T cd07862 149 IKLADFGLARIYSFQMA---LTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVD-QLGKILDV 224 (290)
T ss_pred EEEccccceEeccCCcc---cccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHHH-HHHHHHHH
Confidence 99999999987654321 123458999999999988889999999999999999999999996432211 111100
Q ss_pred -cccCCCchhh---hcccCCCCCchhhhhhhchhhhhhhhh-hHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 039533 858 -RKALPDDVMD---IVDSSLLPDDEDLILTGNQRQKQARIN-SIIECLISMVRIGVACSMELPQDRTNMTNVVH 926 (949)
Q Consensus 858 -~~~~~~~~~~---~~d~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 926 (949)
....++.... ......... +....+ .....+..+.+++.+|++.||++|||+.|+++
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~ 286 (290)
T cd07862 225 IGLPGEEDWPRDVALPRQAFHSK------------SAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 286 (290)
T ss_pred hCCCChhhchhhhcccchhccCC------------CCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhc
Confidence 0000000000 000000000 000000 01123456789999999999999999999984
No 67
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=100.00 E-value=1e-36 Score=329.27 Aligned_cols=267 Identities=22% Similarity=0.357 Sum_probs=202.4
Q ss_pred HhcCCCCCCeeeeecCceEEEEEEcC-----CCEEEEEEEEecCCC-cchHHHHHHHHHHHhcCCCcceeEEeeeecccc
Q 039533 624 ATSGFSSANLVGVGSFGSVYKGIIDE-----GRTTIAVKVFNLQHH-GASRSFIAECKALKSIRHRNLVKVLTACLGADY 697 (949)
Q Consensus 624 ~~~~y~~~~~lg~G~~g~Vy~~~~~~-----~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 697 (949)
+.++|++.+.||+|+||.||+|.+.. .++.||+|++..... ....++.+|+.++++++||||+++++++....
T Consensus 4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~- 82 (277)
T cd05062 4 AREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQ- 82 (277)
T ss_pred cHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCC-
Confidence 46789999999999999999998642 356799999864322 23456889999999999999999999975443
Q ss_pred cCCccceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCC
Q 039533 698 RGNDFKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDY 777 (949)
Q Consensus 698 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~ 777 (949)
..++||||+++++|.+++...............+++..+..++.|++.||+|||+. +++||||||+||+++++
T Consensus 83 ----~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~~vH~dlkp~Nil~~~~ 155 (277)
T cd05062 83 ----PTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAED 155 (277)
T ss_pred ----CeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCcchheEEEcCC
Confidence 78999999999999999964322111111234568889999999999999999976 89999999999999999
Q ss_pred CceEEeecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHh-CCCCCccccccCchhhhh
Q 039533 778 MTARVGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVI-GKKPIDIMFEGDINLHNF 856 (949)
Q Consensus 778 ~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~ellt-g~~Pf~~~~~~~~~~~~~ 856 (949)
+.++|+|||+++...............++..|+|||++.+..++.++|||||||++|||++ |..||...... ....
T Consensus 156 ~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~~--~~~~- 232 (277)
T cd05062 156 FTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSNE--QVLR- 232 (277)
T ss_pred CCEEECCCCCccccCCcceeecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHH--HHHH-
Confidence 9999999999876544332221112335788999999998889999999999999999999 78888532111 0000
Q ss_pred ccccCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHH
Q 039533 857 GRKALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHELQS 930 (949)
Q Consensus 857 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~ 930 (949)
..........+ ..++..+.+++.+|++.+|++|||+.|+++.|++
T Consensus 233 ----------~~~~~~~~~~~-------------------~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~ 277 (277)
T cd05062 233 ----------FVMEGGLLDKP-------------------DNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKE 277 (277)
T ss_pred ----------HHHcCCcCCCC-------------------CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHhhC
Confidence 00000000000 1234568899999999999999999999998863
No 68
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=2.3e-36 Score=334.67 Aligned_cols=201 Identities=25% Similarity=0.355 Sum_probs=174.0
Q ss_pred hcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCC-cchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCccc
Q 039533 625 TSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHH-GASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFK 703 (949)
Q Consensus 625 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 703 (949)
.++|++.+.||+|+||.||+|.+..++..+|+|+++.... .....+.+|++++++++||||+++++++...+ ..
T Consensus 4 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-----~~ 78 (333)
T cd06650 4 DDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDG-----EI 78 (333)
T ss_pred hhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEECC-----EE
Confidence 4689999999999999999999998899999999875432 23457889999999999999999999986544 78
Q ss_pred eeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEe
Q 039533 704 ASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVG 783 (949)
Q Consensus 704 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~ 783 (949)
++||||+++++|.+++.. ...+++..+..++.|++.|++|||+.. +|+||||||+||+++.++.+||+
T Consensus 79 ~lv~e~~~~~~L~~~l~~----------~~~~~~~~~~~~~~~l~~~l~~lH~~~--~ivH~dlkp~Nili~~~~~~kL~ 146 (333)
T cd06650 79 SICMEHMDGGSLDQVLKK----------AGRIPEQILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLC 146 (333)
T ss_pred EEEEecCCCCcHHHHHHH----------cCCCCHHHHHHHHHHHHHHHHHHHhcC--CEEecCCChhhEEEcCCCCEEEe
Confidence 999999999999999862 245788899999999999999999642 79999999999999999999999
Q ss_pred ecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccc
Q 039533 784 DFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIM 846 (949)
Q Consensus 784 DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~ 846 (949)
|||++........ ....|+..|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 147 Dfg~~~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~ 205 (333)
T cd06650 147 DFGVSGQLIDSMA----NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPP 205 (333)
T ss_pred eCCcchhhhhhcc----ccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCc
Confidence 9999876533221 1345899999999999888999999999999999999999999643
No 69
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=100.00 E-value=1.5e-36 Score=341.92 Aligned_cols=269 Identities=26% Similarity=0.366 Sum_probs=205.6
Q ss_pred hcCCCCCCeeeeecCceEEEEEEcC-----CCEEEEEEEEecCCC-cchHHHHHHHHHHHhcC-CCcceeEEeeeecccc
Q 039533 625 TSGFSSANLVGVGSFGSVYKGIIDE-----GRTTIAVKVFNLQHH-GASRSFIAECKALKSIR-HRNLVKVLTACLGADY 697 (949)
Q Consensus 625 ~~~y~~~~~lg~G~~g~Vy~~~~~~-----~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~ 697 (949)
.++|++.++||+|+||.||+|++.. .+..||||+++.... ...+.+.+|+++++++. ||||++++++|...+
T Consensus 36 ~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~~~- 114 (400)
T cd05105 36 RDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACTKSG- 114 (400)
T ss_pred ccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEccCC-
Confidence 4678999999999999999998742 235799999975433 23457899999999996 999999999986544
Q ss_pred cCCccceeEeeeccCCChhhhcCCCCCCCc--------------------------------------------------
Q 039533 698 RGNDFKASVYEFMHYGSLEEWLHPFTGEDE-------------------------------------------------- 727 (949)
Q Consensus 698 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~-------------------------------------------------- 727 (949)
..++||||+++|+|.++++.......
T Consensus 115 ----~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (400)
T cd05105 115 ----PIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVP 190 (400)
T ss_pred ----ceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccch
Confidence 78999999999999999864211000
Q ss_pred ------------------------------------cccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCC
Q 039533 728 ------------------------------------IDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSN 771 (949)
Q Consensus 728 ------------------------------------~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~N 771 (949)
.......+++.++..++.|++.||+|||+. +|+||||||+|
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivH~dikp~N 267 (400)
T cd05105 191 MLEIKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASK---NCVHRDLAARN 267 (400)
T ss_pred hhhhhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChHh
Confidence 000123588899999999999999999977 89999999999
Q ss_pred eeecCCCceEEeecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHh-CCCCCccccccC
Q 039533 772 VLLDDYMTARVGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVI-GKKPIDIMFEGD 850 (949)
Q Consensus 772 Ill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~ellt-g~~Pf~~~~~~~ 850 (949)
|++++++.+||+|||+++...............++..|+|||++.+..++.++|||||||++|||++ |..||.......
T Consensus 268 ill~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~~ 347 (400)
T cd05105 268 VLLAQGKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVDS 347 (400)
T ss_pred EEEeCCCEEEEEeCCcceeccccccccccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccchhH
Confidence 9999999999999999987654333222223447788999999998889999999999999999997 999986432111
Q ss_pred chhhhhccccCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHH
Q 039533 851 INLHNFGRKALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHELQS 930 (949)
Q Consensus 851 ~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~ 930 (949)
.. ...+..... ......++..+.+++.+||+.||++||++.+|.+.|++
T Consensus 348 ~~-------------~~~~~~~~~------------------~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~l~~ 396 (400)
T cd05105 348 TF-------------YNKIKSGYR------------------MAKPDHATQEVYDIMVKCWNSEPEKRPSFLHLSDIVES 396 (400)
T ss_pred HH-------------HHHHhcCCC------------------CCCCccCCHHHHHHHHHHCccCHhHCcCHHHHHHHHHH
Confidence 00 000000000 00011345678899999999999999999999999998
Q ss_pred hH
Q 039533 931 IK 932 (949)
Q Consensus 931 i~ 932 (949)
+.
T Consensus 397 l~ 398 (400)
T cd05105 397 LL 398 (400)
T ss_pred Hc
Confidence 64
No 70
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=100.00 E-value=1e-36 Score=336.14 Aligned_cols=242 Identities=21% Similarity=0.227 Sum_probs=192.2
Q ss_pred CeeeeecCceEEEEEEcCCCEEEEEEEEecCC---CcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCccceeEee
Q 039533 632 NLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQH---HGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFKASVYE 708 (949)
Q Consensus 632 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e 708 (949)
+.||+|+||.||+|++..+++.||+|+++... ......+.+|++++++++||||+++++++...+ ..++|||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~-----~~~lv~E 75 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHD-----RLCFVME 75 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCC-----EEEEEEe
Confidence 47999999999999999899999999997432 223456778999999999999999999876444 7899999
Q ss_pred eccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEeecccc
Q 039533 709 FMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVGDFGLA 788 (949)
Q Consensus 709 ~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~DfG~a 788 (949)
|+++|+|.+++. ....+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++
T Consensus 76 ~~~~~~L~~~l~----------~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~Dfg~~ 142 (323)
T cd05595 76 YANGGELFFHLS----------RERVFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLC 142 (323)
T ss_pred CCCCCcHHHHHH----------HcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEEcCCCCEEecccHHh
Confidence 999999998886 234588999999999999999999977 9999999999999999999999999998
Q ss_pred eecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhccccCCCchhhh
Q 039533 789 RILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKALPDDVMDI 868 (949)
Q Consensus 789 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~ 868 (949)
+........ .....||+.|+|||++.+..++.++|||||||++|||++|+.||....... .. ..+
T Consensus 143 ~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~--~~-----------~~~ 207 (323)
T cd05595 143 KEGISDGAT--MKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHER--LF-----------ELI 207 (323)
T ss_pred ccccCCCCc--cccccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCHHH--HH-----------HHH
Confidence 754322211 113458999999999999899999999999999999999999995321110 00 000
Q ss_pred cccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCC-----CHHHHHH
Q 039533 869 VDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRT-----NMTNVVH 926 (949)
Q Consensus 869 ~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----s~~ev~~ 926 (949)
...... .+ ...+..+.+++.+|++.||++|| ++.|+++
T Consensus 208 ~~~~~~-~p-------------------~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~ 250 (323)
T cd05595 208 LMEEIR-FP-------------------RTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVME 250 (323)
T ss_pred hcCCCC-CC-------------------CCCCHHHHHHHHHHccCCHHHhCCCCCCCHHHHHc
Confidence 000000 00 12345678999999999999998 7888765
No 71
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=1.1e-36 Score=352.79 Aligned_cols=254 Identities=19% Similarity=0.210 Sum_probs=201.2
Q ss_pred CCCCCCeeeeecCceEEEEEEcCC-CEEEEEEEEecCCCcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCcccee
Q 039533 627 GFSSANLVGVGSFGSVYKGIIDEG-RTTIAVKVFNLQHHGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFKAS 705 (949)
Q Consensus 627 ~y~~~~~lg~G~~g~Vy~~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 705 (949)
.|.+.+.||+|++|.||+|....+ ++.||+|............+.+|+.++++++||||+++++++...+ ..++
T Consensus 68 ~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~-----~~~l 142 (478)
T PTZ00267 68 MYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACDHFGIVKHFDDFKSDD-----KLLL 142 (478)
T ss_pred eEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECC-----EEEE
Confidence 488899999999999999998776 7889999876555444567888999999999999999999976544 7999
Q ss_pred EeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEeec
Q 039533 706 VYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVGDF 785 (949)
Q Consensus 706 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~Df 785 (949)
||||+++|+|.+++.... .....+++.++..++.|++.||+|||++ +|+||||||+||+++.++.+||+||
T Consensus 143 v~E~~~gg~L~~~l~~~~------~~~~~l~~~~~~~i~~qi~~aL~~lH~~---~ivHrDlkp~NIll~~~~~~kL~DF 213 (478)
T PTZ00267 143 IMEYGSGGDLNKQIKQRL------KEHLPFQEYEVGLLFYQIVLALDEVHSR---KMMHRDLKSANIFLMPTGIIKLGDF 213 (478)
T ss_pred EEECCCCCCHHHHHHHHH------hccCCCCHHHHHHHHHHHHHHHHHHHhC---CEEECCcCHHhEEECCCCcEEEEeC
Confidence 999999999999885211 1234588999999999999999999977 9999999999999999999999999
Q ss_pred ccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhccccCCCch
Q 039533 786 GLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKALPDDV 865 (949)
Q Consensus 786 G~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~ 865 (949)
|+++...............||+.|+|||++.+..++.++|||||||++|||++|+.||....... ..
T Consensus 214 gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~~~-----~~-------- 280 (478)
T PTZ00267 214 GFSKQYSDSVSLDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQRE-----IM-------- 280 (478)
T ss_pred cCceecCCccccccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHH-----HH--------
Confidence 99987654433222234569999999999999899999999999999999999999986321110 00
Q ss_pred hhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 039533 866 MDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVH 926 (949)
Q Consensus 866 ~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 926 (949)
..+......+.+ ...+..+.+++.+|++.||++||+++|++.
T Consensus 281 ~~~~~~~~~~~~-------------------~~~s~~~~~li~~~L~~dP~~Rps~~~~l~ 322 (478)
T PTZ00267 281 QQVLYGKYDPFP-------------------CPVSSGMKALLDPLLSKNPALRPTTQQLLH 322 (478)
T ss_pred HHHHhCCCCCCC-------------------ccCCHHHHHHHHHHhccChhhCcCHHHHHh
Confidence 000000000000 123346789999999999999999999864
No 72
>PHA03212 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1.4e-36 Score=342.08 Aligned_cols=271 Identities=18% Similarity=0.241 Sum_probs=197.5
Q ss_pred cCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCCcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCcccee
Q 039533 626 SGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFKAS 705 (949)
Q Consensus 626 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 705 (949)
.+|++.+.||+|+||.||+|.+..+++.||+|+.. .+.+.+|++++++++||||+++++++.... ..++
T Consensus 92 ~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~------~~~~~~E~~il~~l~HpnIv~~~~~~~~~~-----~~~l 160 (391)
T PHA03212 92 AGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQ------RGGTATEAHILRAINHPSIIQLKGTFTYNK-----FTCL 160 (391)
T ss_pred CCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechh------hhhhHHHHHHHHhCCCCCCCCEeEEEEECC-----eeEE
Confidence 57999999999999999999999999999999743 235678999999999999999999875443 7899
Q ss_pred EeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEeec
Q 039533 706 VYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVGDF 785 (949)
Q Consensus 706 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~Df 785 (949)
|+|++. ++|.+++. ....+++.+++.++.|++.||+|||++ +|+||||||+||+++.++.+||+||
T Consensus 161 v~e~~~-~~L~~~l~----------~~~~l~~~~~~~i~~qi~~aL~ylH~~---~IvHrDiKP~NIll~~~~~vkL~DF 226 (391)
T PHA03212 161 ILPRYK-TDLYCYLA----------AKRNIAICDILAIERSVLRAIQYLHEN---RIIHRDIKAENIFINHPGDVCLGDF 226 (391)
T ss_pred EEecCC-CCHHHHHH----------hcCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHhEEEcCCCCEEEEeC
Confidence 999985 68888885 234578999999999999999999977 9999999999999999999999999
Q ss_pred ccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccccccCc------hhhhhccc
Q 039533 786 GLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDI------NLHNFGRK 859 (949)
Q Consensus 786 G~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~------~~~~~~~~ 859 (949)
|+|+....... .......||+.|+|||++.+..++.++|||||||++|||++|+.||......+. .+......
T Consensus 227 G~a~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~ 305 (391)
T PHA03212 227 GAACFPVDINA-NKYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRR 305 (391)
T ss_pred Ccccccccccc-cccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHH
Confidence 99975432221 111235699999999999998999999999999999999999988742211100 00000000
Q ss_pred c--CCCchhhhcccCCCCCchhhh---hhhc--hhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 039533 860 A--LPDDVMDIVDSSLLPDDEDLI---LTGN--QRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVH 926 (949)
Q Consensus 860 ~--~~~~~~~~~d~~l~~~~~~~~---~~~~--~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 926 (949)
. .+.+.. .+. ........ .... .......+....+.+..+.+++.+|++.||++|||++|+++
T Consensus 306 ~g~~p~~~~--~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~ 375 (391)
T PHA03212 306 SGTHPNEFP--IDA--QANLDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLD 375 (391)
T ss_pred hcCChhhcC--cch--hHHHHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhc
Confidence 0 000000 000 00000000 0000 00001112223355678899999999999999999999985
No 73
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=100.00 E-value=3.4e-36 Score=323.40 Aligned_cols=262 Identities=21% Similarity=0.315 Sum_probs=206.7
Q ss_pred cCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCC---CcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCcc
Q 039533 626 SGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQH---HGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDF 702 (949)
Q Consensus 626 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 702 (949)
++|++.+.||+|+||.||+|+...+++.||||.++... ......+.+|++++++++||||+++++++...+ .
T Consensus 2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-----~ 76 (267)
T cd08228 2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDN-----E 76 (267)
T ss_pred cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECC-----e
Confidence 57999999999999999999998889999999886432 223356889999999999999999999876543 7
Q ss_pred ceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEE
Q 039533 703 KASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARV 782 (949)
Q Consensus 703 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl 782 (949)
.++||||+++++|.+++.... .....++...+..++.|++.||+|||++ +++||||||+||+++.++.++|
T Consensus 77 ~~~v~e~~~~~~L~~~~~~~~------~~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~~~nil~~~~~~~~l 147 (267)
T cd08228 77 LNIVLELADAGDLSQMIKYFK------KQKRLIPERTVWKYFVQLCSAVEHMHSR---RVMHRDIKPANVFITATGVVKL 147 (267)
T ss_pred EEEEEEecCCCcHHHHHHHhh------hccCCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCCHHHEEEcCCCCEEE
Confidence 899999999999999885321 1234578899999999999999999977 9999999999999999999999
Q ss_pred eecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhccccCC
Q 039533 783 GDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKALP 862 (949)
Q Consensus 783 ~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~ 862 (949)
+|||.+.......... ....|+..|+|||.+.+..++.++||||||+++|||++|+.||...........
T Consensus 148 ~d~g~~~~~~~~~~~~--~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~~~~~~-------- 217 (267)
T cd08228 148 GDLGLGRFFSSKTTAA--HSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLFSLC-------- 217 (267)
T ss_pred CccccceeccchhHHH--hcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccccccHHHHH--------
Confidence 9999998765433211 134588899999999888899999999999999999999999853211111111
Q ss_pred CchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHHhH
Q 039533 863 DDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHELQSIK 932 (949)
Q Consensus 863 ~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~ 932 (949)
..+.....+. ......+..+.+++.+||+.+|++||++.||++.+++++
T Consensus 218 ----~~~~~~~~~~-----------------~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~~~~~~ 266 (267)
T cd08228 218 ----QKIEQCDYPP-----------------LPTEHYSEKLRELVSMCIYPDPDQRPDIGYVHQIAKQMH 266 (267)
T ss_pred ----HHHhcCCCCC-----------------CChhhcCHHHHHHHHHHCCCCcccCcCHHHHHHHHHHhc
Confidence 0000000000 001134566889999999999999999999999999874
No 74
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.4e-37 Score=317.09 Aligned_cols=249 Identities=21% Similarity=0.297 Sum_probs=203.6
Q ss_pred hcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCCc---chHHHHHHHHHHHhcCCCcceeEEeeeecccccCCc
Q 039533 625 TSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHG---ASRSFIAECKALKSIRHRNLVKVLTACLGADYRGND 701 (949)
Q Consensus 625 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 701 (949)
..+|.+.+.||+|.||.|-+|.....|+.||||.+++.... +.-.+++|+++|+.++||||+.+|.+|. +.+
T Consensus 52 kHRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFE-----Nkd 126 (668)
T KOG0611|consen 52 KHRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFE-----NKD 126 (668)
T ss_pred hhHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhc-----CCc
Confidence 35688889999999999999999889999999999755433 3346789999999999999999999954 445
Q ss_pred cceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceE
Q 039533 702 FKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTAR 781 (949)
Q Consensus 702 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~k 781 (949)
...+||||..+|.|++|+. ..+.+++.+++.+++||+.|+.|+|.+ +++|||||.+|||+|+++++|
T Consensus 127 KIvivMEYaS~GeLYDYiS----------er~~LsErEaRhfFRQIvSAVhYCHkn---rVvHRDLKLENILLD~N~NiK 193 (668)
T KOG0611|consen 127 KIVIVMEYASGGELYDYIS----------ERGSLSEREARHFFRQIVSAVHYCHKN---RVVHRDLKLENILLDQNNNIK 193 (668)
T ss_pred eEEEEEEecCCccHHHHHH----------HhccccHHHHHHHHHHHHHHHHHHhhc---cceecccchhheeecCCCCee
Confidence 8999999999999999997 456799999999999999999999977 999999999999999999999
Q ss_pred EeecccceecCCCCCccccccccCccCccCccccCCCccC-CccchHHHHHHHHHHHhCCCCCccccccCchhhhhcccc
Q 039533 782 VGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVS-TNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKA 860 (949)
Q Consensus 782 l~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~ 860 (949)
|+|||++-.+....... .+.|++-|.+||+..|.+|. +.+|-||+||++|-++.|..||+.... ...++..
T Consensus 194 IADFGLSNly~~~kfLq---TFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dh-----k~lvrQI 265 (668)
T KOG0611|consen 194 IADFGLSNLYADKKFLQ---TFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDH-----KRLVRQI 265 (668)
T ss_pred eeccchhhhhccccHHH---HhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCchH-----HHHHHHh
Confidence 99999998887665433 45699999999999999874 899999999999999999999974311 1111110
Q ss_pred CCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHH
Q 039533 861 LPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHEL 928 (949)
Q Consensus 861 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L 928 (949)
-..... ++ +.+....-++++|+..+|++|.|+.+|+...
T Consensus 266 s~GaYr---------EP--------------------~~PSdA~gLIRwmLmVNP~RRATieDiAsHW 304 (668)
T KOG0611|consen 266 SRGAYR---------EP--------------------ETPSDASGLIRWMLMVNPERRATIEDIASHW 304 (668)
T ss_pred hccccc---------CC--------------------CCCchHHHHHHHHHhcCcccchhHHHHhhhh
Confidence 000000 00 1122345688999999999999999998654
No 75
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=100.00 E-value=7.3e-37 Score=335.92 Aligned_cols=239 Identities=22% Similarity=0.254 Sum_probs=189.2
Q ss_pred eeeecCceEEEEEEcCCCEEEEEEEEecC---CCcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCccceeEeeec
Q 039533 634 VGVGSFGSVYKGIIDEGRTTIAVKVFNLQ---HHGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFKASVYEFM 710 (949)
Q Consensus 634 lg~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~ 710 (949)
||+|+||.||+|++..+++.||+|+++.. .......+.+|+.++++++||||+++++++...+ ..++||||+
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-----~~~lv~e~~ 75 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPE-----KLYLVLAFI 75 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCC-----eEEEEEcCC
Confidence 69999999999999988999999998743 2233467788999999999999999998875443 789999999
Q ss_pred cCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEeeccccee
Q 039533 711 HYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVGDFGLARI 790 (949)
Q Consensus 711 ~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~DfG~a~~ 790 (949)
++|+|.+++.. ...+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++.
T Consensus 76 ~~g~L~~~l~~----------~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~ 142 (312)
T cd05585 76 NGGELFHHLQR----------EGRFDLSRARFYTAELLCALENLHKF---NVIYRDLKPENILLDYQGHIALCDFGLCKL 142 (312)
T ss_pred CCCcHHHHHHh----------cCCCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHeEECCCCcEEEEECccccc
Confidence 99999999862 34588999999999999999999977 899999999999999999999999999976
Q ss_pred cCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhccccCCCchhhhcc
Q 039533 791 LSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKALPDDVMDIVD 870 (949)
Q Consensus 791 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~d 870 (949)
....... .....||+.|+|||++.+..++.++||||+||++|||++|+.||...... .... .+..
T Consensus 143 ~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~-----~~~~--------~~~~ 207 (312)
T cd05585 143 NMKDDDK--TNTFCGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENVN-----EMYR--------KILQ 207 (312)
T ss_pred CccCCCc--cccccCCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCCHH-----HHHH--------HHHc
Confidence 4332221 12345899999999999989999999999999999999999999632111 0000 0110
Q ss_pred cCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCC---HHHHH
Q 039533 871 SSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTN---MTNVV 925 (949)
Q Consensus 871 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs---~~ev~ 925 (949)
..... ....+..+.+++.+|++.||++||+ +.|++
T Consensus 208 ~~~~~--------------------~~~~~~~~~~li~~~L~~dp~~R~~~~~~~e~l 245 (312)
T cd05585 208 EPLRF--------------------PDGFDRDAKDLLIGLLSRDPTRRLGYNGAQEIK 245 (312)
T ss_pred CCCCC--------------------CCcCCHHHHHHHHHHcCCCHHHcCCCCCHHHHH
Confidence 00000 0123456788999999999999986 45554
No 76
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=100.00 E-value=6.7e-37 Score=326.73 Aligned_cols=250 Identities=31% Similarity=0.491 Sum_probs=191.7
Q ss_pred CCeeeeecCceEEEEEEc----CCCEEEEEEEEecCCCc-chHHHHHHHHHHHhcCCCcceeEEeeeecccccCCcccee
Q 039533 631 ANLVGVGSFGSVYKGIID----EGRTTIAVKVFNLQHHG-ASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFKAS 705 (949)
Q Consensus 631 ~~~lg~G~~g~Vy~~~~~----~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 705 (949)
.+.||.|.||.||+|.+. ..+..|+||+++..... ..+.+.+|++.+++++||||++++|++...+ ..++
T Consensus 4 ~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~-----~~~l 78 (259)
T PF07714_consen 4 IKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENE-----PLFL 78 (259)
T ss_dssp EEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSS-----SEEE
T ss_pred eeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeecccccccccccccccccccccccc-----cccc
Confidence 478999999999999998 44678999999654332 3678999999999999999999999987444 5899
Q ss_pred EeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEeec
Q 039533 706 VYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVGDF 785 (949)
Q Consensus 706 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~Df 785 (949)
||||+++|+|.+++... ....+++.++..|+.|+++||+|||++ +++||||+++||+++.++.+||+||
T Consensus 79 v~e~~~~g~L~~~L~~~--------~~~~~~~~~~~~i~~~i~~~l~~Lh~~---~iiH~~l~~~nill~~~~~~Kl~~f 147 (259)
T PF07714_consen 79 VMEYCPGGSLDDYLKSK--------NKEPLSEQQRLSIAIQIAEALSYLHSN---NIIHGNLSPSNILLDSNGQVKLSDF 147 (259)
T ss_dssp EEE--TTEBHHHHHHHT--------CTTTSBHHHHHHHHHHHHHHHHHHHHT---TEEEST-SGGGEEEETTTEEEEEST
T ss_pred ccccccccccccccccc--------ccccccccccccccccccccccccccc---ccccccccccccccccccccccccc
Confidence 99999999999999732 235689999999999999999999987 8999999999999999999999999
Q ss_pred ccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHh-CCCCCccccccCchhhhhccccCCCc
Q 039533 786 GLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVI-GKKPIDIMFEGDINLHNFGRKALPDD 864 (949)
Q Consensus 786 G~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~ 864 (949)
|++................+...|+|||.+.+..++.++||||||+++|||++ |+.||......+ ....
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~~~--~~~~-------- 217 (259)
T PF07714_consen 148 GLSRPISEKSKYKNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYDNEE--IIEK-------- 217 (259)
T ss_dssp TTGEETTTSSSEEESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSCHHH--HHHH--------
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc--cccc--------
Confidence 99988743333222223447789999999998889999999999999999999 788875431111 0000
Q ss_pred hhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHH
Q 039533 865 VMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHEL 928 (949)
Q Consensus 865 ~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L 928 (949)
+.+.... +....++..+.+++..||+.+|++|||+.|+++.|
T Consensus 218 ---~~~~~~~-------------------~~~~~~~~~~~~li~~C~~~~p~~RPs~~~i~~~L 259 (259)
T PF07714_consen 218 ---LKQGQRL-------------------PIPDNCPKDIYSLIQQCWSHDPEKRPSFQEILQEL 259 (259)
T ss_dssp ---HHTTEET-------------------TSBTTSBHHHHHHHHHHT-SSGGGS--HHHHHHHH
T ss_pred ---ccccccc-------------------eeccchhHHHHHHHHHHcCCChhhCcCHHHHHhcC
Confidence 0000000 00113355688999999999999999999999876
No 77
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=100.00 E-value=1.9e-36 Score=338.63 Aligned_cols=249 Identities=27% Similarity=0.366 Sum_probs=191.2
Q ss_pred cCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCC-cchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCccce
Q 039533 626 SGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHH-GASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFKA 704 (949)
Q Consensus 626 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 704 (949)
++|+..+.||+|+||.||+|++..+++.||||++..... ...+.+.+|++++++++|+||+++++++...+ ..+
T Consensus 74 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-----~~~ 148 (353)
T PLN00034 74 SELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDHNG-----EIQ 148 (353)
T ss_pred HHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCC-----eEE
Confidence 346677899999999999999988899999999865433 23467889999999999999999999875443 789
Q ss_pred eEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEee
Q 039533 705 SVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVGD 784 (949)
Q Consensus 705 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~D 784 (949)
+||||+++++|.+... .++..+..++.||+.||+|||++ +|+||||||+||++++++.+||+|
T Consensus 149 lv~e~~~~~~L~~~~~--------------~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~kL~D 211 (353)
T PLN00034 149 VLLEFMDGGSLEGTHI--------------ADEQFLADVARQILSGIAYLHRR---HIVHRDIKPSNLLINSAKNVKIAD 211 (353)
T ss_pred EEEecCCCCccccccc--------------CCHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCEEEcc
Confidence 9999999999865432 45667888999999999999977 999999999999999999999999
Q ss_pred cccceecCCCCCccccccccCccCccCccccCC-----CccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhccc
Q 039533 785 FGLARILSPDHTQTSSFSVKGSLGYIAPEYGVG-----CEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRK 859 (949)
Q Consensus 785 fG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~ 859 (949)
||+++........ .....||..|+|||++.. ...+.++|||||||++|||++|+.||......+ ......
T Consensus 212 fG~~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~--~~~~~~- 286 (353)
T PLN00034 212 FGVSRILAQTMDP--CNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGD--WASLMC- 286 (353)
T ss_pred cccceeccccccc--ccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcc--HHHHHH-
Confidence 9999876533221 123469999999998743 234578999999999999999999996221111 000000
Q ss_pred cCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHH
Q 039533 860 ALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHE 927 (949)
Q Consensus 860 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 927 (949)
.+.... .. .....+...+.+++.+||+.||++|||+.|+++.
T Consensus 287 -------~~~~~~-~~------------------~~~~~~~~~l~~li~~~l~~~P~~Rpt~~ell~h 328 (353)
T PLN00034 287 -------AICMSQ-PP------------------EAPATASREFRHFISCCLQREPAKRWSAMQLLQH 328 (353)
T ss_pred -------HHhccC-CC------------------CCCCccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 000000 00 0001334568899999999999999999999874
No 78
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=100.00 E-value=4e-36 Score=324.77 Aligned_cols=259 Identities=24% Similarity=0.351 Sum_probs=200.0
Q ss_pred cCCCCCCeeeeecCceEEEEEEcCCCE----EEEEEEEecCCC-cchHHHHHHHHHHHhcCCCcceeEEeeeecccccCC
Q 039533 626 SGFSSANLVGVGSFGSVYKGIIDEGRT----TIAVKVFNLQHH-GASRSFIAECKALKSIRHRNLVKVLTACLGADYRGN 700 (949)
Q Consensus 626 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~----~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 700 (949)
++|++.+.||+|+||.||+|.+..+++ .|++|.+..... ....++..|+..+++++||||+++++++...
T Consensus 7 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~~~----- 81 (279)
T cd05111 7 TELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICPGA----- 81 (279)
T ss_pred hhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEECCC-----
Confidence 468889999999999999999865555 477777653322 2235677888899999999999999986422
Q ss_pred ccceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCce
Q 039533 701 DFKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTA 780 (949)
Q Consensus 701 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~ 780 (949)
..++++||+++|+|.+++.. ....+++..+..|+.|++.||+|||+. +++||||||+||++++++.+
T Consensus 82 -~~~~i~e~~~~gsL~~~l~~---------~~~~~~~~~~~~i~~qi~~~l~~lH~~---~iiH~dlkp~nili~~~~~~ 148 (279)
T cd05111 82 -SLQLVTQLSPLGSLLDHVRQ---------HRDSLDPQRLLNWCVQIAKGMYYLEEH---RMVHRNLAARNILLKSDSIV 148 (279)
T ss_pred -ccEEEEEeCCCCcHHHHHHh---------cccCCCHHHHHHHHHHHHHHHHHHHHC---CEeccccCcceEEEcCCCcE
Confidence 46789999999999999962 234589999999999999999999977 89999999999999999999
Q ss_pred EEeecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHh-CCCCCccccccCchhhhhccc
Q 039533 781 RVGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVI-GKKPIDIMFEGDINLHNFGRK 859 (949)
Q Consensus 781 kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~ellt-g~~Pf~~~~~~~~~~~~~~~~ 859 (949)
||+|||.++...............++..|+|||+..+..++.++|||||||++||+++ |+.||.......
T Consensus 149 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~--------- 219 (279)
T cd05111 149 QIADFGVADLLYPDDKKYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPHE--------- 219 (279)
T ss_pred EEcCCccceeccCCCcccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHHH---------
Confidence 9999999987654433222223447789999999988889999999999999999998 999986331110
Q ss_pred cCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHHhHHh
Q 039533 860 ALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHELQSIKNI 934 (949)
Q Consensus 860 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~~~ 934 (949)
..+++........ ...++..+.+++.+||..+|++|||+.|+++.|..+...
T Consensus 220 -----~~~~~~~~~~~~~------------------~~~~~~~~~~li~~c~~~~p~~Rps~~el~~~l~~~~~~ 271 (279)
T cd05111 220 -----VPDLLEKGERLAQ------------------PQICTIDVYMVMVKCWMIDENVRPTFKELANEFTRMARD 271 (279)
T ss_pred -----HHHHHHCCCcCCC------------------CCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHhC
Confidence 1111111000000 001233567889999999999999999999999887653
No 79
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=100.00 E-value=1.5e-36 Score=335.33 Aligned_cols=243 Identities=22% Similarity=0.257 Sum_probs=193.1
Q ss_pred CeeeeecCceEEEEEEcCCCEEEEEEEEecCC---CcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCccceeEee
Q 039533 632 NLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQH---HGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFKASVYE 708 (949)
Q Consensus 632 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e 708 (949)
+.||+|+||.||+|++..+++.||+|++.... ......+.+|++++++++||||+++++++...+ ..++|||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-----~~~lv~E 75 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKD-----RLCFVME 75 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCC-----EEEEEEe
Confidence 47999999999999999899999999997432 233457888999999999999999998865444 7899999
Q ss_pred eccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEeecccc
Q 039533 709 FMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVGDFGLA 788 (949)
Q Consensus 709 ~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~DfG~a 788 (949)
|+++|+|.+++. ....+++.++..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++
T Consensus 76 y~~~g~L~~~l~----------~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDikp~NIll~~~~~~kL~DfG~~ 142 (328)
T cd05593 76 YVNGGELFFHLS----------RERVFSEDRTRFYGAEIVSALDYLHSG---KIVYRDLKLENLMLDKDGHIKITDFGLC 142 (328)
T ss_pred CCCCCCHHHHHH----------hcCCCCHHHHHHHHHHHHHHHHHHHhC---CeEecccCHHHeEECCCCcEEEecCcCC
Confidence 999999999886 234588999999999999999999977 9999999999999999999999999998
Q ss_pred eecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhccccCCCchhhh
Q 039533 789 RILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKALPDDVMDI 868 (949)
Q Consensus 789 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~ 868 (949)
+........ .....||+.|+|||++.+..++.++|||||||++|||++|+.||...... .. ........
T Consensus 143 ~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~~--~~---~~~~~~~~---- 211 (328)
T cd05593 143 KEGITDAAT--MKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE--KL---FELILMED---- 211 (328)
T ss_pred ccCCCcccc--cccccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCHH--HH---HHHhccCC----
Confidence 754322211 12345999999999999889999999999999999999999999532111 00 00000000
Q ss_pred cccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCC-----CHHHHHHH
Q 039533 869 VDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRT-----NMTNVVHE 927 (949)
Q Consensus 869 ~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----s~~ev~~~ 927 (949)
..+ + ...+..+.+++.+|++.||++|| ++.|+++.
T Consensus 212 --~~~---p-------------------~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h 251 (328)
T cd05593 212 --IKF---P-------------------RTLSADAKSLLSGLLIKDPNKRLGGGPDDAKEIMRH 251 (328)
T ss_pred --ccC---C-------------------CCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHhcC
Confidence 000 0 12234578899999999999997 88888753
No 80
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=100.00 E-value=2.9e-36 Score=328.15 Aligned_cols=269 Identities=24% Similarity=0.380 Sum_probs=208.2
Q ss_pred cCCCCCCeeeeecCceEEEEEEc-----CCCEEEEEEEEecCCCcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCC
Q 039533 626 SGFSSANLVGVGSFGSVYKGIID-----EGRTTIAVKVFNLQHHGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGN 700 (949)
Q Consensus 626 ~~y~~~~~lg~G~~g~Vy~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 700 (949)
.+|.+.+.||+|+||.||+|+.. .++..+++|.++.......+.+.+|++++++++|+||+++++++...+
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~---- 80 (291)
T cd05094 5 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGD---- 80 (291)
T ss_pred HHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCCCCcceEEEEEccCC----
Confidence 45788899999999999999863 245679999987555545577999999999999999999999976544
Q ss_pred ccceeEeeeccCCChhhhcCCCCCCC------ccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeee
Q 039533 701 DFKASVYEFMHYGSLEEWLHPFTGED------EIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLL 774 (949)
Q Consensus 701 ~~~~lv~e~~~~gsL~~~l~~~~~~~------~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll 774 (949)
..++||||+++++|.+++....... ........+++..++.++.|++.|++|||++ +|+||||||+||++
T Consensus 81 -~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlkp~Nil~ 156 (291)
T cd05094 81 -PLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQ---HFVHRDLATRNCLV 156 (291)
T ss_pred -ceEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccCcceEEE
Confidence 7899999999999999996432110 0011234589999999999999999999977 89999999999999
Q ss_pred cCCCceEEeecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHh-CCCCCccccccCchh
Q 039533 775 DDYMTARVGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVI-GKKPIDIMFEGDINL 853 (949)
Q Consensus 775 ~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~ellt-g~~Pf~~~~~~~~~~ 853 (949)
+.++.++|+|||.++...............++..|+|||++.+..++.++|||||||++|||+| |+.||....... .
T Consensus 157 ~~~~~~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~--~ 234 (291)
T cd05094 157 GANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTE--V 234 (291)
T ss_pred ccCCcEEECCCCcccccCCCceeecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH--H
Confidence 9999999999999986544332222223446788999999998899999999999999999999 999985332110 0
Q ss_pred hhhccccCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHHhHH
Q 039533 854 HNFGRKALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHELQSIKN 933 (949)
Q Consensus 854 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~~ 933 (949)
.. .+........ ...++..+.+++.+|++.+|++||++.+|++.|+++.+
T Consensus 235 ~~------------~~~~~~~~~~------------------~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l~~~~~ 284 (291)
T cd05094 235 IE------------CITQGRVLER------------------PRVCPKEVYDIMLGCWQREPQQRLNIKEIYKILHALGK 284 (291)
T ss_pred HH------------HHhCCCCCCC------------------CccCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHh
Confidence 00 0000000000 01234568899999999999999999999999999976
Q ss_pred h
Q 039533 934 I 934 (949)
Q Consensus 934 ~ 934 (949)
.
T Consensus 285 ~ 285 (291)
T cd05094 285 A 285 (291)
T ss_pred h
Confidence 4
No 81
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=100.00 E-value=2.6e-36 Score=334.45 Aligned_cols=270 Identities=23% Similarity=0.321 Sum_probs=204.5
Q ss_pred cCCCCCCeeeeecCceEEEEEEcC-----CCEEEEEEEEecCCC-cchHHHHHHHHHHHhc-CCCcceeEEeeeeccccc
Q 039533 626 SGFSSANLVGVGSFGSVYKGIIDE-----GRTTIAVKVFNLQHH-GASRSFIAECKALKSI-RHRNLVKVLTACLGADYR 698 (949)
Q Consensus 626 ~~y~~~~~lg~G~~g~Vy~~~~~~-----~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~ 698 (949)
++|++.+.||+|+||.||+|.... +++.||+|+++.... ...+.+..|+.++.++ +|+||++++++|...+
T Consensus 7 ~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~-- 84 (337)
T cd05054 7 DRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTKPG-- 84 (337)
T ss_pred HHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEecCC--
Confidence 579999999999999999997532 347899999874332 2345678899999999 8999999999876432
Q ss_pred CCccceeEeeeccCCChhhhcCCCCCCCc---------------------------------------------------
Q 039533 699 GNDFKASVYEFMHYGSLEEWLHPFTGEDE--------------------------------------------------- 727 (949)
Q Consensus 699 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~--------------------------------------------------- 727 (949)
...+++|||+++++|.+++........
T Consensus 85 --~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (337)
T cd05054 85 --GPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEG 162 (337)
T ss_pred --CCEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhh
Confidence 367899999999999999863221000
Q ss_pred cccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEeecccceecCCCCCccccccccCcc
Q 039533 728 IDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVGDFGLARILSPDHTQTSSFSVKGSL 807 (949)
Q Consensus 728 ~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~ 807 (949)
.......+++..+..++.||+.||+|||+. +|+||||||+||++++++.+||+|||+++.+.............++.
T Consensus 163 ~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~ 239 (337)
T cd05054 163 DELYKEPLTLEDLISYSFQVARGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPL 239 (337)
T ss_pred hHHhhcCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcceEEEeCCCcEEEeccccchhcccCcchhhccCCCCCc
Confidence 000123689999999999999999999977 99999999999999999999999999998764433322222344678
Q ss_pred CccCccccCCCccCCccchHHHHHHHHHHHh-CCCCCccccccCchhhhhccccCCCchhhhcccCCCCCchhhhhhhch
Q 039533 808 GYIAPEYGVGCEVSTNGDVYSYGILLLELVI-GKKPIDIMFEGDINLHNFGRKALPDDVMDIVDSSLLPDDEDLILTGNQ 886 (949)
Q Consensus 808 ~y~aPE~~~~~~~~~~sDiwSlGvvl~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~ 886 (949)
.|+|||++.+..++.++|||||||++|||++ |..||......+ .+. ..+.......
T Consensus 240 ~y~aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~-~~~------------~~~~~~~~~~---------- 296 (337)
T cd05054 240 KWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDE-EFC------------RRLKEGTRMR---------- 296 (337)
T ss_pred cccCcHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccH-HHH------------HHHhccCCCC----------
Confidence 8999999999999999999999999999998 999986321111 000 0000000000
Q ss_pred hhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHHhHH
Q 039533 887 RQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHELQSIKN 933 (949)
Q Consensus 887 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~~ 933 (949)
........+.+++.+|++.+|++||++.||++.|+++..
T Consensus 297 --------~~~~~~~~~~~l~~~cl~~~p~~RPs~~ell~~l~~~~~ 335 (337)
T cd05054 297 --------APEYATPEIYSIMLDCWHNNPEDRPTFSELVEILGDLLQ 335 (337)
T ss_pred --------CCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 001234568899999999999999999999999998754
No 82
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=100.00 E-value=8.7e-37 Score=338.14 Aligned_cols=247 Identities=21% Similarity=0.261 Sum_probs=196.5
Q ss_pred hcCCCCCCeeeeecCceEEEEEEcCCC-EEEEEEEEecCC---CcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCC
Q 039533 625 TSGFSSANLVGVGSFGSVYKGIIDEGR-TTIAVKVFNLQH---HGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGN 700 (949)
Q Consensus 625 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~-~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 700 (949)
.++|++.+.||+|+||.||+|.+..++ ..||+|++.... ....+.+.+|+++++.++||||+++++++.+.+
T Consensus 29 ~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~---- 104 (340)
T PTZ00426 29 YEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDES---- 104 (340)
T ss_pred hhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCC----
Confidence 457999999999999999999876444 789999986432 233457889999999999999999999976544
Q ss_pred ccceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCce
Q 039533 701 DFKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTA 780 (949)
Q Consensus 701 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~ 780 (949)
..++||||+++|+|.+++. ....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+
T Consensus 105 -~~~lv~Ey~~~g~L~~~i~----------~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~i 170 (340)
T PTZ00426 105 -YLYLVLEFVIGGEFFTFLR----------RNKRFPNDVGCFYAAQIVLIFEYLQSL---NIVYRDLKPENLLLDKDGFI 170 (340)
T ss_pred -EEEEEEeCCCCCcHHHHHH----------HcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEccCCCHHHEEECCCCCE
Confidence 7899999999999999996 234588999999999999999999977 99999999999999999999
Q ss_pred EEeecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhcccc
Q 039533 781 RVGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKA 860 (949)
Q Consensus 781 kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~ 860 (949)
||+|||+++...... ....||+.|+|||++.+..++.++|||||||++|||++|+.||...... ..
T Consensus 171 kL~DFG~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~--~~------- 236 (340)
T PTZ00426 171 KMTDFGFAKVVDTRT-----YTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEPL--LI------- 236 (340)
T ss_pred EEecCCCCeecCCCc-----ceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCHH--HH-------
Confidence 999999998764322 1345999999999999888999999999999999999999999632111 00
Q ss_pred CCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCC-----CHHHHHHH
Q 039533 861 LPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRT-----NMTNVVHE 927 (949)
Q Consensus 861 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----s~~ev~~~ 927 (949)
...+.+.... .+ ......+.+++.+|++.||++|+ +++|+++.
T Consensus 237 ----~~~i~~~~~~-~p-------------------~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~h 284 (340)
T PTZ00426 237 ----YQKILEGIIY-FP-------------------KFLDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKEH 284 (340)
T ss_pred ----HHHHhcCCCC-CC-------------------CCCCHHHHHHHHHHcccCHHHcCCCCCCCHHHHHcC
Confidence 0001110000 00 01233467899999999999995 78887653
No 83
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=100.00 E-value=5.8e-36 Score=322.73 Aligned_cols=265 Identities=25% Similarity=0.416 Sum_probs=203.8
Q ss_pred CCCCCeeeeecCceEEEEEEcCC---CEEEEEEEEecCCC--cchHHHHHHHHHHHhcCCCcceeEEeeeecccc-cCCc
Q 039533 628 FSSANLVGVGSFGSVYKGIIDEG---RTTIAVKVFNLQHH--GASRSFIAECKALKSIRHRNLVKVLTACLGADY-RGND 701 (949)
Q Consensus 628 y~~~~~lg~G~~g~Vy~~~~~~~---~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~-~~~~ 701 (949)
|.+.+.||+|+||.||+|....+ +..||+|+++.... .....+.+|++.+++++||||+++++++...+. ....
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 80 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIP 80 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCc
Confidence 56789999999999999998643 37899999875432 234578999999999999999999998765442 2334
Q ss_pred cceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceE
Q 039533 702 FKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTAR 781 (949)
Q Consensus 702 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~k 781 (949)
..++||||+++|+|.+++...... .....+++..+..++.|++.||+|||+. +++||||||+||++++++.+|
T Consensus 81 ~~~~v~e~~~~~~l~~~l~~~~~~----~~~~~~~~~~~~~~~~~i~~aL~~lH~~---~i~H~dlkp~Nil~~~~~~~k 153 (273)
T cd05035 81 KPMVILPFMKHGDLHSFLLYSRLG----GLPEKLPLQTLLKFMVDIALGMEYLSNR---NFIHRDLAARNCMLREDMTVC 153 (273)
T ss_pred ccEEEEeccCCCCHHHHHHHhhcc----CCcccCCHHHHHHHHHHHHHHHHHHHhC---CeeccccchheEEECCCCeEE
Confidence 579999999999999998632211 1234689999999999999999999977 899999999999999999999
Q ss_pred EeecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHh-CCCCCccccccCchhhhhcccc
Q 039533 782 VGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVI-GKKPIDIMFEGDINLHNFGRKA 860 (949)
Q Consensus 782 l~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~ellt-g~~Pf~~~~~~~~~~~~~~~~~ 860 (949)
|+|||.++...............++..|+|||++.+..++.++|||||||++|||++ |..||...... .....
T Consensus 154 l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~--~~~~~---- 227 (273)
T cd05035 154 VADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVENH--EIYDY---- 227 (273)
T ss_pred ECCccceeeccccccccccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHH--HHHHH----
Confidence 999999987654433222222335678999999988889999999999999999999 88988532211 00000
Q ss_pred CCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHHh
Q 039533 861 LPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHELQSI 931 (949)
Q Consensus 861 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i 931 (949)
+.+..... ....++..+.+++.+|++.||++|||+.||++.|+++
T Consensus 228 -------~~~~~~~~-------------------~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~l~~~ 272 (273)
T cd05035 228 -------LRHGNRLK-------------------QPEDCLDELYDLMYSCWRADPKDRPTFTKLREVLENI 272 (273)
T ss_pred -------HHcCCCCC-------------------CCcCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 00000000 0112345688999999999999999999999999875
No 84
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=100.00 E-value=4.1e-36 Score=322.55 Aligned_cols=258 Identities=22% Similarity=0.385 Sum_probs=203.0
Q ss_pred hcCCCCCCeeeeecCceEEEEEEcCC---CEEEEEEEEecCCC-cchHHHHHHHHHHHhcCCCcceeEEeeeecccccCC
Q 039533 625 TSGFSSANLVGVGSFGSVYKGIIDEG---RTTIAVKVFNLQHH-GASRSFIAECKALKSIRHRNLVKVLTACLGADYRGN 700 (949)
Q Consensus 625 ~~~y~~~~~lg~G~~g~Vy~~~~~~~---~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 700 (949)
.++|++.+.||+|+||.||+|.+... ...||||+++.... .....+.+|+.++++++||||+++++++...+
T Consensus 3 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~---- 78 (266)
T cd05033 3 PSYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSR---- 78 (266)
T ss_pred hHHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCC----
Confidence 35789999999999999999998643 45799999875433 23457889999999999999999999875444
Q ss_pred ccceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCce
Q 039533 701 DFKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTA 780 (949)
Q Consensus 701 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~ 780 (949)
..++||||+++++|.+++.. ....+++.++..++.|++.|++|||+. +|+||||||+||++++++.+
T Consensus 79 -~~~iv~e~~~~~~L~~~~~~---------~~~~~~~~~~~~~~~~l~~~l~~Lh~~---~i~H~di~p~nili~~~~~~ 145 (266)
T cd05033 79 -PVMIITEYMENGSLDKFLRE---------NDGKFTVGQLVGMLRGIASGMKYLSEM---NYVHRDLAARNILVNSNLVC 145 (266)
T ss_pred -ceEEEEEcCCCCCHHHHHHh---------ccCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCCE
Confidence 78999999999999999862 123689999999999999999999976 89999999999999999999
Q ss_pred EEeecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHh-CCCCCccccccCchhhhhccc
Q 039533 781 RVGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVI-GKKPIDIMFEGDINLHNFGRK 859 (949)
Q Consensus 781 kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~ellt-g~~Pf~~~~~~~~~~~~~~~~ 859 (949)
+|+|||.++...............++..|+|||...+..++.++||||||+++|||++ |..||...... .....
T Consensus 146 ~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~--~~~~~--- 220 (266)
T cd05033 146 KVSDFGLSRRLEDSEATYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQ--DVIKA--- 220 (266)
T ss_pred EECccchhhcccccccceeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCHH--HHHHH---
Confidence 9999999988753222211112335678999999998889999999999999999998 99998532111 00000
Q ss_pred cCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHHh
Q 039533 860 ALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHELQSI 931 (949)
Q Consensus 860 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i 931 (949)
+.+....+. ...++..+.+++.+|++.+|++||++.||++.|+++
T Consensus 221 --------~~~~~~~~~-------------------~~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~l~~~ 265 (266)
T cd05033 221 --------VEDGYRLPP-------------------PMDCPSALYQLMLDCWQKDRNERPTFSQIVSTLDKM 265 (266)
T ss_pred --------HHcCCCCCC-------------------CCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 000000000 113345688999999999999999999999999875
No 85
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=100.00 E-value=1.2e-36 Score=352.22 Aligned_cols=265 Identities=21% Similarity=0.245 Sum_probs=205.9
Q ss_pred HHHhcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCC--CcchHHHHHHHHHHHhcCCCcceeEEeeeeccccc-
Q 039533 622 YNATSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQH--HGASRSFIAECKALKSIRHRNLVKVLTACLGADYR- 698 (949)
Q Consensus 622 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~- 698 (949)
....++|.+.+.||+|+||+||+|++..+++.||||++.... ......+.+|+..+..++|+||+++++.+...+..
T Consensus 28 ~~~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~ 107 (496)
T PTZ00283 28 KEQAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRN 107 (496)
T ss_pred cccCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccC
Confidence 345579999999999999999999998889999999987543 23345688999999999999999988776543211
Q ss_pred --CCccceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecC
Q 039533 699 --GNDFKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDD 776 (949)
Q Consensus 699 --~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~ 776 (949)
.....++||||+++|+|.+++.... .....+++..+..++.|++.||.|||+. +|+||||||+||+++.
T Consensus 108 ~~~~~~i~lV~Ey~~~gsL~~~l~~~~------~~~~~l~e~~~~~i~~qll~aL~~lH~~---~IiHrDLKP~NILl~~ 178 (496)
T PTZ00283 108 PENVLMIALVLDYANAGDLRQEIKSRA------KTNRTFREHEAGLLFIQVLLAVHHVHSK---HMIHRDIKSANILLCS 178 (496)
T ss_pred cccceEEEEEEeCCCCCcHHHHHHHhh------ccCCCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEeC
Confidence 1123679999999999999986321 1235688999999999999999999977 9999999999999999
Q ss_pred CCceEEeecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhh
Q 039533 777 YMTARVGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNF 856 (949)
Q Consensus 777 ~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~ 856 (949)
++.+||+|||+++.+.............||+.|+|||++.+..++.++|||||||++|||++|+.||...... ..
T Consensus 179 ~~~vkL~DFGls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~~~-----~~ 253 (496)
T PTZ00283 179 NGLVKLGDFGFSKMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGENME-----EV 253 (496)
T ss_pred CCCEEEEecccCeeccccccccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHH-----HH
Confidence 9999999999998765433322223456999999999999989999999999999999999999999632111 11
Q ss_pred ccccCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHH
Q 039533 857 GRKALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHE 927 (949)
Q Consensus 857 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 927 (949)
... .......+. ....+..+.+++.+||+.||++||++.|+++.
T Consensus 254 ~~~--------~~~~~~~~~-------------------~~~~~~~l~~li~~~L~~dP~~RPs~~ell~~ 297 (496)
T PTZ00283 254 MHK--------TLAGRYDPL-------------------PPSISPEMQEIVTALLSSDPKRRPSSSKLLNM 297 (496)
T ss_pred HHH--------HhcCCCCCC-------------------CCCCCHHHHHHHHHHcccChhhCcCHHHHHhC
Confidence 000 000000000 01234568899999999999999999999763
No 86
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=100.00 E-value=1.3e-36 Score=312.19 Aligned_cols=279 Identities=22% Similarity=0.272 Sum_probs=205.2
Q ss_pred cCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCC--cchHHHHHHHHHHHhcCCCc-ceeEEeeeeccc-ccCCc
Q 039533 626 SGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHH--GASRSFIAECKALKSIRHRN-LVKVLTACLGAD-YRGND 701 (949)
Q Consensus 626 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~n-iv~~~~~~~~~~-~~~~~ 701 (949)
..|...++||+|.||+||+|+...+|+.||+|+++.... +......+|+.++++++|+| |+++++++.... ++...
T Consensus 11 ~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~~ 90 (323)
T KOG0594|consen 11 FDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGIG 90 (323)
T ss_pred HHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeecccccccc
Confidence 346667889999999999999999999999999985543 45677899999999999999 999999987544 23334
Q ss_pred cceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceE
Q 039533 702 FKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTAR 781 (949)
Q Consensus 702 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~k 781 (949)
..++||||++. +|.+++...... ...++...+..++.|+++||+|||++ +|+||||||+||+|+++|.+|
T Consensus 91 ~l~lvfe~~d~-DL~~ymd~~~~~------~~g~~~~~ik~~m~Qll~gl~~~H~~---~IlHRDLKPQNlLi~~~G~lK 160 (323)
T KOG0594|consen 91 KLYLVFEFLDR-DLKKYMDSLPKK------PQGLPPRLIKSFMRQLLRGLAFLHSH---GILHRDLKPQNLLISSSGVLK 160 (323)
T ss_pred eEEEEEEeecc-cHHHHHHhcccc------ccCCCHHHHHHHHHHHHHHHHHHHhC---CeecccCCcceEEECCCCcEe
Confidence 67899999965 999999743211 13466688999999999999999988 999999999999999999999
Q ss_pred EeecccceecCCCCCccccccccCccCccCccccCCC-ccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhc--c
Q 039533 782 VGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGC-EVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFG--R 858 (949)
Q Consensus 782 l~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~--~ 858 (949)
|+|||+|+...-+... ....++|..|+|||++.+. .|+...||||+||+++||+++++-|....+.+....-+- .
T Consensus 161 laDFGlAra~~ip~~~--yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~ql~~If~~lG 238 (323)
T KOG0594|consen 161 LADFGLARAFSIPMRT--YTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEIDQLFRIFRLLG 238 (323)
T ss_pred eeccchHHHhcCCccc--ccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHcC
Confidence 9999999976633321 2245689999999999987 689999999999999999999998875544221111110 0
Q ss_pred ----ccCCCchhhhcccCC--CCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHH
Q 039533 859 ----KALPDDVMDIVDSSL--LPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHE 927 (949)
Q Consensus 859 ----~~~~~~~~~~~d~~l--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 927 (949)
..++.. ....+-.. .... .+..-............+++.+|++.+|++|.|++.+++.
T Consensus 239 tP~e~~Wp~v-~~~~~~k~~f~~~~----------~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h 302 (323)
T KOG0594|consen 239 TPNEKDWPGV-SSLPDYKAPFPKWP----------GPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTH 302 (323)
T ss_pred CCCccCCCCc-cccccccccCcCCC----------CccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcC
Confidence 111110 00111000 0000 0000000001111367889999999999999999999875
No 87
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=100.00 E-value=3.2e-36 Score=321.34 Aligned_cols=251 Identities=24% Similarity=0.363 Sum_probs=197.0
Q ss_pred cCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCCcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCcccee
Q 039533 626 SGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFKAS 705 (949)
Q Consensus 626 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 705 (949)
++|++.+.||+|+||.||+|++. ++..+|+|.+.... ...+.+.+|++++++++||||+++++++...+ ..++
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~-~~~~~a~K~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-----~~~i 76 (256)
T cd05114 4 SELTFMKELGSGQFGVVHLGKWR-AQIKVAIKAINEGA-MSEEDFIEEAKVMMKLSHPKLVQLYGVCTQQK-----PLYI 76 (256)
T ss_pred HHcEEeeEecCCcCceEEEEEec-cCceEEEEecccCC-ccHHHHHHHHHHHHHCCCCCceeEEEEEccCC-----CEEE
Confidence 46888899999999999999987 45689999876332 33467889999999999999999999975544 7899
Q ss_pred EeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEeec
Q 039533 706 VYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVGDF 785 (949)
Q Consensus 706 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~Df 785 (949)
||||+++|+|.++++. ....+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+||
T Consensus 77 v~e~~~~~~L~~~~~~---------~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~kl~d~ 144 (256)
T cd05114 77 VTEFMENGCLLNYLRQ---------RQGKLSKDMLLSMCQDVCEGMEYLERN---SFIHRDLAARNCLVSSTGVVKVSDF 144 (256)
T ss_pred EEEcCCCCcHHHHHHh---------CccCCCHHHHHHHHHHHHHHHHHHHHC---CccccccCcceEEEcCCCeEEECCC
Confidence 9999999999999862 123578999999999999999999977 8999999999999999999999999
Q ss_pred ccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHh-CCCCCccccccCchhhhhccccCCCc
Q 039533 786 GLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVI-GKKPIDIMFEGDINLHNFGRKALPDD 864 (949)
Q Consensus 786 G~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~ 864 (949)
|.++......... .....++..|+|||++.+..++.++||||||+++|||++ |+.||...... .....
T Consensus 145 g~~~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~--~~~~~-------- 213 (256)
T cd05114 145 GMTRYVLDDEYTS-SSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNY--EVVEM-------- 213 (256)
T ss_pred CCccccCCCceec-cCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCHH--HHHHH--------
Confidence 9998654332211 112335678999999988889999999999999999999 89998533111 00000
Q ss_pred hhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHH
Q 039533 865 VMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHEL 928 (949)
Q Consensus 865 ~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L 928 (949)
+........+ ...+..+.+++.+||+.+|++||+++|+++.|
T Consensus 214 ---i~~~~~~~~~-------------------~~~~~~~~~li~~c~~~~p~~Rps~~~l~~~l 255 (256)
T cd05114 214 ---ISRGFRLYRP-------------------KLASMTVYEVMYSCWHEKPEGRPTFAELLRAI 255 (256)
T ss_pred ---HHCCCCCCCC-------------------CCCCHHHHHHHHHHccCCcccCcCHHHHHHhh
Confidence 0000000000 01234678999999999999999999999886
No 88
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=100.00 E-value=3.3e-36 Score=326.68 Aligned_cols=271 Identities=24% Similarity=0.366 Sum_probs=204.1
Q ss_pred cCCCCCCeeeeecCceEEEEEE----cCCCEEEEEEEEecCCCcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCc
Q 039533 626 SGFSSANLVGVGSFGSVYKGII----DEGRTTIAVKVFNLQHHGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGND 701 (949)
Q Consensus 626 ~~y~~~~~lg~G~~g~Vy~~~~----~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 701 (949)
.+|++.+.||+|+||.||+|.. ..+++.||+|++........+.+.+|++++++++||||+++++++... +..
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~---~~~ 80 (284)
T cd05081 4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYSA---GRR 80 (284)
T ss_pred ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccC---CCC
Confidence 4688899999999999999984 346789999998765555567889999999999999999999987533 234
Q ss_pred cceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceE
Q 039533 702 FKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTAR 781 (949)
Q Consensus 702 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~k 781 (949)
..++||||+++++|.+++.. ....+++..+..++.|++.||+|||++ +|+||||||+||++++++.+|
T Consensus 81 ~~~lv~e~~~~~~L~~~l~~---------~~~~l~~~~~~~~~~~l~~aL~~LH~~---~i~H~dlkp~nili~~~~~~~ 148 (284)
T cd05081 81 NLRLVMEYLPYGSLRDYLQK---------HRERLDHRKLLLYASQICKGMEYLGSK---RYVHRDLATRNILVESENRVK 148 (284)
T ss_pred ceEEEEEecCCCCHHHHHHh---------cCcCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCCHhhEEECCCCeEE
Confidence 67899999999999999862 123588999999999999999999977 999999999999999999999
Q ss_pred EeecccceecCCCCCcc-ccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhcccc
Q 039533 782 VGDFGLARILSPDHTQT-SSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKA 860 (949)
Q Consensus 782 l~DfG~a~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~ 860 (949)
|+|||+++......... ......++..|+|||+..+..++.++|||||||++|||++|..|+...... ........
T Consensus 149 l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~---~~~~~~~~ 225 (284)
T cd05081 149 IGDFGLTKVLPQDKEYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPAE---FMRMMGND 225 (284)
T ss_pred ECCCcccccccCCCcceeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcchh---hhhhcccc
Confidence 99999998765433211 111122445699999998888999999999999999999988775322110 00000000
Q ss_pred CC-Cc----hhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHHhH
Q 039533 861 LP-DD----VMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHELQSIK 932 (949)
Q Consensus 861 ~~-~~----~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~ 932 (949)
.. .. ..+.+... .+.+....++..+.+++.+||+.+|++||||.||++.|++++
T Consensus 226 ~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~~~ 284 (284)
T cd05081 226 KQGQMIVYHLIELLKNN------------------GRLPAPPGCPAEIYAIMKECWNNDPSQRPSFSELALQVEAIR 284 (284)
T ss_pred cccccchHHHHHHHhcC------------------CcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHhcC
Confidence 00 00 00111100 000111234567899999999999999999999999998864
No 89
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=100.00 E-value=4.3e-36 Score=325.49 Aligned_cols=271 Identities=23% Similarity=0.316 Sum_probs=203.2
Q ss_pred CC-CCCCeeeeecCceEEEEEE----cCCCEEEEEEEEecCCC-cchHHHHHHHHHHHhcCCCcceeEEeeeecccccCC
Q 039533 627 GF-SSANLVGVGSFGSVYKGII----DEGRTTIAVKVFNLQHH-GASRSFIAECKALKSIRHRNLVKVLTACLGADYRGN 700 (949)
Q Consensus 627 ~y-~~~~~lg~G~~g~Vy~~~~----~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 700 (949)
+| ++.+.||+|+||+||++.. ..+++.||+|+++.... .....+.+|++++++++||||+++++++... ..
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~---~~ 80 (283)
T cd05080 4 RYLKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQ---GG 80 (283)
T ss_pred hhceeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecC---CC
Confidence 44 8889999999999987653 34678899999875432 2346788999999999999999999987542 23
Q ss_pred ccceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCce
Q 039533 701 DFKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTA 780 (949)
Q Consensus 701 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~ 780 (949)
...++||||+++++|.+++. ...+++.++..++.|++.|++|||++ +|+||||||+||++++++.+
T Consensus 81 ~~~~lv~e~~~~~~l~~~~~-----------~~~l~~~~~~~i~~~l~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~ 146 (283)
T cd05080 81 KGLQLIMEYVPLGSLRDYLP-----------KHKLNLAQLLLFAQQICEGMAYLHSQ---HYIHRDLAARNVLLDNDRLV 146 (283)
T ss_pred ceEEEEecCCCCCCHHHHHH-----------HcCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccChheEEEcCCCcE
Confidence 46789999999999999986 13489999999999999999999977 89999999999999999999
Q ss_pred EEeecccceecCCCCCcc-ccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhccc
Q 039533 781 RVGDFGLARILSPDHTQT-SSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRK 859 (949)
Q Consensus 781 kl~DfG~a~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~ 859 (949)
||+|||+++......... ......++..|+|||+..+..++.++||||||+++|||+||..||................
T Consensus 147 ~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~ 226 (283)
T cd05080 147 KIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEEMIGPKQG 226 (283)
T ss_pred EEeecccccccCCcchhhccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcchhhhhhccccc
Confidence 999999998765432211 1112235677999999988889999999999999999999999986432211111110000
Q ss_pred cC-CCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHHhH
Q 039533 860 AL-PDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHELQSIK 932 (949)
Q Consensus 860 ~~-~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~ 932 (949)
.. .....+.++.... .+....++..+.+++..||+.+|++|||+++|++.|+++.
T Consensus 227 ~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~~l~~~~ 282 (283)
T cd05080 227 QMTVVRLIELLERGMR------------------LPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIPILKEMH 282 (283)
T ss_pred ccchhhhhhhhhcCCC------------------CCCCCCCCHHHHHHHHHHhccChhhCCCHHHHHHHHHHhh
Confidence 00 0001111111110 0011234567899999999999999999999999999875
No 90
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=100.00 E-value=2.6e-36 Score=326.76 Aligned_cols=265 Identities=26% Similarity=0.404 Sum_probs=204.7
Q ss_pred hcCCCCCCeeeeecCceEEEEEEcC-----CCEEEEEEEEecCCCc-chHHHHHHHHHHHhcCCCcceeEEeeeeccccc
Q 039533 625 TSGFSSANLVGVGSFGSVYKGIIDE-----GRTTIAVKVFNLQHHG-ASRSFIAECKALKSIRHRNLVKVLTACLGADYR 698 (949)
Q Consensus 625 ~~~y~~~~~lg~G~~g~Vy~~~~~~-----~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 698 (949)
.++|.+.+.||+|+||.||+|+... +++.||||+++..... ..+.+.+|++++++++|+||+++++++....
T Consensus 4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~-- 81 (280)
T cd05049 4 RDTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCTEGD-- 81 (280)
T ss_pred hHHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEecCC--
Confidence 3468889999999999999998743 3578999998755443 3568999999999999999999999976544
Q ss_pred CCccceeEeeeccCCChhhhcCCCCCCCc----cccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeee
Q 039533 699 GNDFKASVYEFMHYGSLEEWLHPFTGEDE----IDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLL 774 (949)
Q Consensus 699 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~----~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll 774 (949)
..++||||+++++|.+++........ .......+++.++..++.|++.|++|||+. +++||||||+||++
T Consensus 82 ---~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~---~i~h~dlkp~nili 155 (280)
T cd05049 82 ---PPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQ---HFVHRDLATRNCLV 155 (280)
T ss_pred ---CeEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhC---CeeccccccceEEE
Confidence 78999999999999999974321110 012335688999999999999999999977 89999999999999
Q ss_pred cCCCceEEeecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHh-CCCCCccccccCchh
Q 039533 775 DDYMTARVGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVI-GKKPIDIMFEGDINL 853 (949)
Q Consensus 775 ~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~ellt-g~~Pf~~~~~~~~~~ 853 (949)
+.++.+||+|||.++...............++..|+|||++.+..++.++|||||||++|||++ |+.||....... .
T Consensus 156 ~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~~--~ 233 (280)
T cd05049 156 GYDLVVKIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNEE--V 233 (280)
T ss_pred cCCCeEEECCcccceecccCcceecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCHHH--H
Confidence 9999999999999986543322111122346788999999999999999999999999999998 999985322110 1
Q ss_pred hhhccccCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHH
Q 039533 854 HNFGRKALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHELQ 929 (949)
Q Consensus 854 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~ 929 (949)
.... ........+ ...+..+.+++.+||+.||++||++.||++.|+
T Consensus 234 ~~~~-----------~~~~~~~~~-------------------~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~l~ 279 (280)
T cd05049 234 IECI-----------TQGRLLQRP-------------------RTCPSEVYDIMLGCWKRDPQQRINIKDIHERLQ 279 (280)
T ss_pred HHHH-----------HcCCcCCCC-------------------CCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhh
Confidence 0000 000000000 123456889999999999999999999999886
No 91
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=100.00 E-value=3.9e-36 Score=322.11 Aligned_cols=256 Identities=25% Similarity=0.429 Sum_probs=203.3
Q ss_pred cCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCCcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCcccee
Q 039533 626 SGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFKAS 705 (949)
Q Consensus 626 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 705 (949)
.+|++.+.||+|+||.||+|.+...++.||+|+++... ...+.+.+|++++++++|+||+++++++...+ ..++
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-----~~~l 79 (263)
T cd05052 6 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREP-----PFYI 79 (263)
T ss_pred HHeEEeeecCCcccceEEEEEEecCCceEEEEEecCCc-hHHHHHHHHHHHHHhCCCCChhheEEEEcCCC-----CcEE
Confidence 45788899999999999999998889999999986432 33467899999999999999999999976544 7899
Q ss_pred EeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEeec
Q 039533 706 VYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVGDF 785 (949)
Q Consensus 706 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~Df 785 (949)
||||+++++|.+++... ....+++..++.++.|+++||+|||+. +++||||||+||++++++.+||+||
T Consensus 80 v~e~~~~~~L~~~~~~~--------~~~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~df 148 (263)
T cd05052 80 ITEFMTYGNLLDYLREC--------NRQEVNAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADF 148 (263)
T ss_pred EEEeCCCCcHHHHHHhC--------CCCCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccCcceEEEcCCCcEEeCCC
Confidence 99999999999998621 234588999999999999999999977 8999999999999999999999999
Q ss_pred ccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHh-CCCCCccccccCchhhhhccccCCCc
Q 039533 786 GLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVI-GKKPIDIMFEGDINLHNFGRKALPDD 864 (949)
Q Consensus 786 G~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~ 864 (949)
|.+.......... .....++..|+|||...+..++.++|||||||++|||++ |..||......+ .
T Consensus 149 ~~~~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~--~----------- 214 (263)
T cd05052 149 GLSRLMTGDTYTA-HAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ--V----------- 214 (263)
T ss_pred ccccccccceeec-cCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHH--H-----------
Confidence 9998765432211 112234668999999998899999999999999999998 999985321110 0
Q ss_pred hhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHHh
Q 039533 865 VMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHELQSI 931 (949)
Q Consensus 865 ~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i 931 (949)
.+.+....... ....++..+.+++.+|++.+|++||++.|+++.|+.+
T Consensus 215 -~~~~~~~~~~~------------------~~~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~~l~~~ 262 (263)
T cd05052 215 -YELLEKGYRME------------------RPEGCPPKVYELMRACWQWNPSDRPSFAEIHQAFETM 262 (263)
T ss_pred -HHHHHCCCCCC------------------CCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHhh
Confidence 00011000000 0012345688999999999999999999999999875
No 92
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=100.00 E-value=4.6e-36 Score=324.51 Aligned_cols=261 Identities=26% Similarity=0.401 Sum_probs=203.6
Q ss_pred hcCCCCCCeeeeecCceEEEEEEcCCCE----EEEEEEEecCCC-cchHHHHHHHHHHHhcCCCcceeEEeeeecccccC
Q 039533 625 TSGFSSANLVGVGSFGSVYKGIIDEGRT----TIAVKVFNLQHH-GASRSFIAECKALKSIRHRNLVKVLTACLGADYRG 699 (949)
Q Consensus 625 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~----~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 699 (949)
.++|++.++||+|+||+||+|++..+++ .||+|+++.... ...+.+.+|+.+++.++||||+++++++...
T Consensus 6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~---- 81 (279)
T cd05109 6 ETELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLTS---- 81 (279)
T ss_pred hhheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcCC----
Confidence 3578889999999999999999765554 589999875433 2346788999999999999999999987532
Q ss_pred CccceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCc
Q 039533 700 NDFKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMT 779 (949)
Q Consensus 700 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~ 779 (949)
..+++|||+++|+|.+++.. ....+++.+++.++.|++.||+|||++ +|+||||||+||++++++.
T Consensus 82 --~~~l~~~~~~~g~l~~~l~~---------~~~~~~~~~~~~~~~qi~~~L~~lH~~---~iiH~dlkp~Nil~~~~~~ 147 (279)
T cd05109 82 --TVQLVTQLMPYGCLLDYVRE---------NKDRIGSQDLLNWCVQIAKGMSYLEEV---RLVHRDLAARNVLVKSPNH 147 (279)
T ss_pred --CcEEEEEcCCCCCHHHHHhh---------ccCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccccceEEEcCCCc
Confidence 46799999999999999862 234588999999999999999999977 8999999999999999999
Q ss_pred eEEeecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHh-CCCCCccccccCchhhhhcc
Q 039533 780 ARVGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVI-GKKPIDIMFEGDINLHNFGR 858 (949)
Q Consensus 780 ~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~ellt-g~~Pf~~~~~~~~~~~~~~~ 858 (949)
+||+|||+++...............++..|+|||...+..++.++|||||||++|||++ |..||+...... .
T Consensus 148 ~kL~dfG~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~--~----- 220 (279)
T cd05109 148 VKITDFGLARLLDIDETEYHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPARE--I----- 220 (279)
T ss_pred EEECCCCceeecccccceeecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHH--H-----
Confidence 99999999987754333221112335678999999988889999999999999999998 899986321110 1
Q ss_pred ccCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHHhHHhh
Q 039533 859 KALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHELQSIKNIL 935 (949)
Q Consensus 859 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~~~~ 935 (949)
...+....... ....++..+.+++.+||+.||++||++.|+++.++++....
T Consensus 221 -------~~~~~~~~~~~------------------~~~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~~l~~~~~~~ 272 (279)
T cd05109 221 -------PDLLEKGERLP------------------QPPICTIDVYMIMVKCWMIDSECRPRFRELVDEFSRMARDP 272 (279)
T ss_pred -------HHHHHCCCcCC------------------CCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhcCC
Confidence 11111100000 00123456789999999999999999999999998875553
No 93
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=4.5e-36 Score=322.43 Aligned_cols=254 Identities=22% Similarity=0.278 Sum_probs=199.8
Q ss_pred cCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCCcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCcccee
Q 039533 626 SGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFKAS 705 (949)
Q Consensus 626 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 705 (949)
++|++.+.||+|+||.||+|++..+++.||+|++..........+.+|+.++++++||||+++++++...+ ..++
T Consensus 9 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~-----~~~i 83 (267)
T cd06646 9 HDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYLSRE-----KLWI 83 (267)
T ss_pred hhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcCCCCeeeeeEEEEeCC-----EEEE
Confidence 57999999999999999999998889999999997655445567889999999999999999999976544 7899
Q ss_pred EeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEeec
Q 039533 706 VYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVGDF 785 (949)
Q Consensus 706 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~Df 785 (949)
||||+++++|.++++ ....+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+||
T Consensus 84 v~e~~~~~~L~~~~~----------~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nill~~~~~~~l~df 150 (267)
T cd06646 84 CMEYCGGGSLQDIYH----------VTGPLSELQIAYVCRETLQGLAYLHSK---GKMHRDIKGANILLTDNGDVKLADF 150 (267)
T ss_pred EEeCCCCCcHHHHHH----------hcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCCEEECcC
Confidence 999999999999986 224578999999999999999999977 9999999999999999999999999
Q ss_pred ccceecCCCCCccccccccCccCccCccccC---CCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhccccCC
Q 039533 786 GLARILSPDHTQTSSFSVKGSLGYIAPEYGV---GCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKALP 862 (949)
Q Consensus 786 G~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~ 862 (949)
|+++......... ....|+..|+|||.+. ...++.++|||||||++|||++|+.||......... ...
T Consensus 151 g~~~~~~~~~~~~--~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~-~~~------ 221 (267)
T cd06646 151 GVAAKITATIAKR--KSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRAL-FLM------ 221 (267)
T ss_pred ccceeeccccccc--CccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhh-eee------
Confidence 9998764332211 1345889999999874 345788999999999999999999998533211100 000
Q ss_pred CchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHH
Q 039533 863 DDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHE 927 (949)
Q Consensus 863 ~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 927 (949)
........ ........+..+.+++.+|++.+|++||+++++++.
T Consensus 222 ------~~~~~~~~---------------~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 265 (267)
T cd06646 222 ------SKSNFQPP---------------KLKDKTKWSSTFHNFVKISLTKNPKKRPTAERLLTH 265 (267)
T ss_pred ------ecCCCCCC---------------CCccccccCHHHHHHHHHHhhCChhhCcCHHHHhcC
Confidence 00000000 000001234568899999999999999999999864
No 94
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=2.4e-38 Score=303.04 Aligned_cols=252 Identities=20% Similarity=0.263 Sum_probs=198.0
Q ss_pred hcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecC--CCcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCcc
Q 039533 625 TSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQ--HHGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDF 702 (949)
Q Consensus 625 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 702 (949)
++.|++.+.||+|.|+.||++....+|+.+|+|++... .....+++.+|+++.+.++||||+++.+.+. ...+
T Consensus 10 ~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~-----~~~~ 84 (355)
T KOG0033|consen 10 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQ-----EESF 84 (355)
T ss_pred chhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhc-----ccce
Confidence 35678889999999999999999999999999998632 2234578999999999999999999987744 4448
Q ss_pred ceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeec---CCCc
Q 039533 703 KASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLD---DYMT 779 (949)
Q Consensus 703 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~---~~~~ 779 (949)
.|+|+|+|+|++|..-+- .+..+++..+-..+.||++||.|+|++ +|||||+||+|+++. ..--
T Consensus 85 ~ylvFe~m~G~dl~~eIV----------~R~~ySEa~aSH~~rQiLeal~yCH~n---~IvHRDvkP~nllLASK~~~A~ 151 (355)
T KOG0033|consen 85 HYLVFDLVTGGELFEDIV----------AREFYSEADASHCIQQILEALAYCHSN---GIVHRDLKPENLLLASKAKGAA 151 (355)
T ss_pred eEEEEecccchHHHHHHH----------HHHHHHHHHHHHHHHHHHHHHHHHHhc---CceeccCChhheeeeeccCCCc
Confidence 899999999999977664 234578889999999999999999988 999999999999994 3446
Q ss_pred eEEeecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhccc
Q 039533 780 ARVGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRK 859 (949)
Q Consensus 780 ~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~ 859 (949)
+||+|||+|..+...... ...+||++|||||++...+|+..+|||+.||++|-++.|.+||-.....+ .+......
T Consensus 152 vKL~~FGvAi~l~~g~~~---~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~~r-lye~I~~g 227 (355)
T KOG0033|consen 152 VKLADFGLAIEVNDGEAW---HGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHR-LYEQIKAG 227 (355)
T ss_pred eeecccceEEEeCCcccc---ccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCccHHH-HHHHHhcc
Confidence 899999999998843332 25679999999999999999999999999999999999999995321111 00000000
Q ss_pred cCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 039533 860 ALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVH 926 (949)
Q Consensus 860 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 926 (949)
.+ ++ +. +.+....++..+++++|+..||.+|.|+.|.+.
T Consensus 228 ~y-----d~--------------------~~---~~w~~is~~Ak~LvrrML~~dP~kRIta~EAL~ 266 (355)
T KOG0033|consen 228 AY-----DY--------------------PS---PEWDTVTPEAKSLIRRMLTVNPKKRITADEALK 266 (355)
T ss_pred cc-----CC--------------------CC---cccCcCCHHHHHHHHHHhccChhhhccHHHHhC
Confidence 00 00 00 011234456678899999999999999988753
No 95
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=100.00 E-value=2e-36 Score=341.69 Aligned_cols=202 Identities=23% Similarity=0.299 Sum_probs=171.7
Q ss_pred cCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCC---CcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCcc
Q 039533 626 SGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQH---HGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDF 702 (949)
Q Consensus 626 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 702 (949)
+.|++.+.||+|+||+||+|++..+++.||+|+++... ......+.+|++++++++||||+++++++.+.+ .
T Consensus 1 ~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~-----~ 75 (381)
T cd05626 1 SMFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKD-----N 75 (381)
T ss_pred CCceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCC-----E
Confidence 36888999999999999999999899999999997532 223457889999999999999999999976544 7
Q ss_pred ceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEE
Q 039533 703 KASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARV 782 (949)
Q Consensus 703 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl 782 (949)
.++||||+++|+|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++++||
T Consensus 76 ~~lv~E~~~gg~L~~~l~~----------~~~~~e~~~~~~~~qi~~aL~~LH~~---givHrDlKp~Nili~~~~~~kL 142 (381)
T cd05626 76 LYFVMDYIPGGDMMSLLIR----------MEVFPEVLARFYIAELTLAIESVHKM---GFIHRDIKPDNILIDLDGHIKL 142 (381)
T ss_pred EEEEEecCCCCcHHHHHHh----------cCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCcHHHEEECCCCCEEE
Confidence 9999999999999999862 34578889999999999999999977 9999999999999999999999
Q ss_pred eecccceecCCCCC---------------------------------------------ccccccccCccCccCccccCC
Q 039533 783 GDFGLARILSPDHT---------------------------------------------QTSSFSVKGSLGYIAPEYGVG 817 (949)
Q Consensus 783 ~DfG~a~~~~~~~~---------------------------------------------~~~~~~~~gt~~y~aPE~~~~ 817 (949)
+|||+++....... ........||..|+|||++.+
T Consensus 143 ~DFGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~ 222 (381)
T cd05626 143 TDFGLCTGFRWTHNSKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLR 222 (381)
T ss_pred eeCcCCcccccccccccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcC
Confidence 99999764321000 000113469999999999998
Q ss_pred CccCCccchHHHHHHHHHHHhCCCCCcc
Q 039533 818 CEVSTNGDVYSYGILLLELVIGKKPIDI 845 (949)
Q Consensus 818 ~~~~~~sDiwSlGvvl~elltg~~Pf~~ 845 (949)
..++.++|||||||++|||++|+.||..
T Consensus 223 ~~~~~~~DiwSlG~il~elltG~~Pf~~ 250 (381)
T cd05626 223 KGYTQLCDWWSVGVILFEMLVGQPPFLA 250 (381)
T ss_pred CCCCCccceeehhhHHHHHHhCCCCCcC
Confidence 8899999999999999999999999964
No 96
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=100.00 E-value=5.1e-37 Score=298.24 Aligned_cols=253 Identities=23% Similarity=0.339 Sum_probs=203.1
Q ss_pred HhcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCCc----c----hHHHHHHHHHHHhc-CCCcceeEEeeeec
Q 039533 624 ATSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHG----A----SRSFIAECKALKSI-RHRNLVKVLTACLG 694 (949)
Q Consensus 624 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~----~----~~~~~~E~~~l~~l-~h~niv~~~~~~~~ 694 (949)
-...|...+.+|.|..++|-++..+.++..+|+|++...... . .+...+|+.+++++ .||+|+.+.+++..
T Consensus 15 fy~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes 94 (411)
T KOG0599|consen 15 FYAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYES 94 (411)
T ss_pred HHhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccC
Confidence 345678889999999999999999999999999998633211 1 14567899999998 69999999999554
Q ss_pred ccccCCccceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeee
Q 039533 695 ADYRGNDFKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLL 774 (949)
Q Consensus 695 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll 774 (949)
+.+.++|+|.|+.|.|.+|+. ..-.+++.+.++|++|+.+|++|||.. .||||||||+|||+
T Consensus 95 -----~sF~FlVFdl~prGELFDyLt----------s~VtlSEK~tR~iMrqlfegVeylHa~---~IVHRDLKpENILl 156 (411)
T KOG0599|consen 95 -----DAFVFLVFDLMPRGELFDYLT----------SKVTLSEKETRRIMRQLFEGVEYLHAR---NIVHRDLKPENILL 156 (411)
T ss_pred -----cchhhhhhhhcccchHHHHhh----------hheeecHHHHHHHHHHHHHHHHHHHHh---hhhhcccChhheee
Confidence 448999999999999999997 345689999999999999999999987 89999999999999
Q ss_pred cCCCceEEeecccceecCCCCCccccccccCccCccCccccCC------CccCCccchHHHHHHHHHHHhCCCCCccccc
Q 039533 775 DDYMTARVGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVG------CEVSTNGDVYSYGILLLELVIGKKPIDIMFE 848 (949)
Q Consensus 775 ~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~ 848 (949)
|++.++||+|||+|+.+.++.... ...||++|.|||.+.- ..|+..+|+||+||++|.++.|.+||-
T Consensus 157 ddn~~i~isDFGFa~~l~~GekLr---elCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFw---- 229 (411)
T KOG0599|consen 157 DDNMNIKISDFGFACQLEPGEKLR---ELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFW---- 229 (411)
T ss_pred ccccceEEeccceeeccCCchhHH---HhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchh----
Confidence 999999999999999987766533 4569999999997652 358899999999999999999999983
Q ss_pred cCchhhhhccccCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 039533 849 GDINLHNFGRKALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVH 926 (949)
Q Consensus 849 ~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 926 (949)
.++..- +...+ ..+ +-+.+-+++.+......+++.+|++.||.+|.|++|+++
T Consensus 230 --------HRkQml--MLR~I---meG------------kyqF~speWadis~~~KdLIsrlLqVdp~~Ritake~La 282 (411)
T KOG0599|consen 230 --------HRKQML--MLRMI---MEG------------KYQFRSPEWADISATVKDLISRLLQVDPTKRITAKEALA 282 (411)
T ss_pred --------HHHHHH--HHHHH---Hhc------------ccccCCcchhhccccHHHHHHHHHeeCchhcccHHHHhc
Confidence 111000 00000 000 011122334566777899999999999999999999976
No 97
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=100.00 E-value=6.8e-36 Score=322.04 Aligned_cols=265 Identities=24% Similarity=0.405 Sum_probs=201.2
Q ss_pred CCCCCeeeeecCceEEEEEEcCCCE--EEEEEEEecCC--CcchHHHHHHHHHHHhcCCCcceeEEeeeecccc-cCCcc
Q 039533 628 FSSANLVGVGSFGSVYKGIIDEGRT--TIAVKVFNLQH--HGASRSFIAECKALKSIRHRNLVKVLTACLGADY-RGNDF 702 (949)
Q Consensus 628 y~~~~~lg~G~~g~Vy~~~~~~~~~--~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~-~~~~~ 702 (949)
|.+.+.||+|+||.||+|++..++. .||+|.++... ....+.+.+|++++++++|+||+++++++..... .....
T Consensus 1 ~~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 80 (272)
T cd05075 1 LALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPS 80 (272)
T ss_pred CccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCC
Confidence 4577899999999999999876654 69999886432 2334678899999999999999999998754321 22335
Q ss_pred ceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEE
Q 039533 703 KASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARV 782 (949)
Q Consensus 703 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl 782 (949)
.++||||+++|+|.+++..... ......+++..+..++.|++.||+|||++ +|+||||||+||++++++.+||
T Consensus 81 ~~~v~e~~~~~~l~~~~~~~~~----~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl 153 (272)
T cd05075 81 PVVILPFMKHGDLHSFLLYSRL----GDCPQYLPTQMLVKFMTDIASGMEYLSSK---SFIHRDLAARNCMLNENMNVCV 153 (272)
T ss_pred cEEEEEeCCCCcHHHHHHHhcc----cCCcccCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhheEEcCCCCEEE
Confidence 7899999999999998742111 11234589999999999999999999977 8999999999999999999999
Q ss_pred eecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHh-CCCCCccccccCchhhhhccccC
Q 039533 783 GDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVI-GKKPIDIMFEGDINLHNFGRKAL 861 (949)
Q Consensus 783 ~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~ellt-g~~Pf~~~~~~~~~~~~~~~~~~ 861 (949)
+|||+++...............++..|+|||+..+..++.++|||||||++|||++ |+.||...... .......
T Consensus 154 ~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~--~~~~~~~--- 228 (272)
T cd05075 154 ADFGLSKKIYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVENS--EIYDYLR--- 228 (272)
T ss_pred CCCCcccccCcccceecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCHH--HHHHHHH---
Confidence 99999987654332221122336778999999998889999999999999999999 88998632111 1100000
Q ss_pred CCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHHh
Q 039533 862 PDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHELQSI 931 (949)
Q Consensus 862 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i 931 (949)
....... ...++..+.+++.+||+.+|++|||+.|+++.|+++
T Consensus 229 --------~~~~~~~-------------------~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~~~ 271 (272)
T cd05075 229 --------QGNRLKQ-------------------PPDCLDGLYSLMSSCWLLNPKDRPSFETLRCELEKA 271 (272)
T ss_pred --------cCCCCCC-------------------CCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 0000000 012344578999999999999999999999999875
No 98
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=100.00 E-value=2.1e-36 Score=323.91 Aligned_cols=258 Identities=28% Similarity=0.468 Sum_probs=207.3
Q ss_pred HHhcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCCcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCcc
Q 039533 623 NATSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDF 702 (949)
Q Consensus 623 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 702 (949)
+...+|++.+.||.|+||.||+|.+.. ++.+|+|++..........+.+|+.++++++|+||+++++++...+ .
T Consensus 3 ~~~~~y~~~~~ig~g~~~~vy~~~~~~-~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~-----~ 76 (261)
T cd05148 3 RPREEFTLERKLGSGYFGEVWEGLWKN-RVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCSVGE-----P 76 (261)
T ss_pred CcHHHHHHhhhhccCCCccEEEeEecC-CCcEEEEeccccchhhHHHHHHHHHHHhcCCCcchhheeeeEecCC-----C
Confidence 345678999999999999999999985 8899999997665545678999999999999999999999976544 7
Q ss_pred ceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEE
Q 039533 703 KASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARV 782 (949)
Q Consensus 703 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl 782 (949)
.++||||+++++|.+++... ....+++..+..++.|++.|++|||++ +|+||||||+||++++++.+||
T Consensus 77 ~~lv~e~~~~~~L~~~~~~~--------~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~h~dl~~~nilv~~~~~~kl 145 (261)
T cd05148 77 VYIITELMEKGSLLAFLRSP--------EGQVLPVASLIDMACQVAEGMAYLEEQ---NSIHRDLAARNILVGEDLVCKV 145 (261)
T ss_pred eEEEEeecccCCHHHHHhcC--------CCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccCcceEEEcCCceEEE
Confidence 89999999999999999732 234588999999999999999999977 8999999999999999999999
Q ss_pred eecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHh-CCCCCccccccCchhhhhccccC
Q 039533 783 GDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVI-GKKPIDIMFEGDINLHNFGRKAL 861 (949)
Q Consensus 783 ~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~ellt-g~~Pf~~~~~~~~~~~~~~~~~~ 861 (949)
+|||.+........... ...++..|+|||+..+..++.++||||||+++|+|++ |+.||.......
T Consensus 146 ~d~g~~~~~~~~~~~~~--~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~~----------- 212 (261)
T cd05148 146 ADFGLARLIKEDVYLSS--DKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNHE----------- 212 (261)
T ss_pred ccccchhhcCCcccccc--CCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHHH-----------
Confidence 99999987644322111 2336778999999988889999999999999999998 899985332110
Q ss_pred CCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHHh
Q 039533 862 PDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHELQSI 931 (949)
Q Consensus 862 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i 931 (949)
..+.+...... +....++..+.+++.+|++.||++|||++|+++.|+.+
T Consensus 213 ---~~~~~~~~~~~------------------~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~~L~~~ 261 (261)
T cd05148 213 ---VYDQITAGYRM------------------PCPAKCPQEIYKIMLECWAAEPEDRPSFKALREELDNI 261 (261)
T ss_pred ---HHHHHHhCCcC------------------CCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhcC
Confidence 00000000000 00113456688999999999999999999999999864
No 99
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=100.00 E-value=7.1e-36 Score=324.96 Aligned_cols=267 Identities=24% Similarity=0.375 Sum_probs=204.3
Q ss_pred CCCCCCeeeeecCceEEEEEEcC-----CCEEEEEEEEecCCC-cchHHHHHHHHHHHhcCCCcceeEEeeeecccccCC
Q 039533 627 GFSSANLVGVGSFGSVYKGIIDE-----GRTTIAVKVFNLQHH-GASRSFIAECKALKSIRHRNLVKVLTACLGADYRGN 700 (949)
Q Consensus 627 ~y~~~~~lg~G~~g~Vy~~~~~~-----~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 700 (949)
+|++.+.||+|+||.||+|+... +...+|+|.+..... ...+++.+|+.++++++||||+++++.+...+
T Consensus 1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~---- 76 (290)
T cd05045 1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDG---- 76 (290)
T ss_pred CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCC----
Confidence 47888999999999999998752 235789998864432 23467889999999999999999999876544
Q ss_pred ccceeEeeeccCCChhhhcCCCCCCC--------------ccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecC
Q 039533 701 DFKASVYEFMHYGSLEEWLHPFTGED--------------EIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCD 766 (949)
Q Consensus 701 ~~~~lv~e~~~~gsL~~~l~~~~~~~--------------~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrD 766 (949)
..++||||+.+++|.+++....... ........+++.+++.++.|++.||+|||+. +|+|||
T Consensus 77 -~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~---~ivH~d 152 (290)
T cd05045 77 -PLLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEM---KLVHRD 152 (290)
T ss_pred -CcEEEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHC---Ceehhh
Confidence 6899999999999999986432110 0111234688999999999999999999977 999999
Q ss_pred CCCCCeeecCCCceEEeecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHh-CCCCCcc
Q 039533 767 LKPSNVLLDDYMTARVGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVI-GKKPIDI 845 (949)
Q Consensus 767 lkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~ellt-g~~Pf~~ 845 (949)
|||+||++++++.+||+|||+++...............++..|+|||+..+..++.++||||||+++|||++ |..||..
T Consensus 153 ikp~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~ 232 (290)
T cd05045 153 LAARNVLVAEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPG 232 (290)
T ss_pred hhhheEEEcCCCcEEeccccccccccCccchhcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCC
Confidence 999999999999999999999986544332222222345778999999988889999999999999999999 9999853
Q ss_pred ccccCchhhhhccccCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHH
Q 039533 846 MFEGDINLHNFGRKALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVV 925 (949)
Q Consensus 846 ~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~ 925 (949)
.... ++.+.++....... ...++..+.+++.+|++.+|++||+++|++
T Consensus 233 ~~~~--------------~~~~~~~~~~~~~~------------------~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~ 280 (290)
T cd05045 233 IAPE--------------RLFNLLKTGYRMER------------------PENCSEEMYNLMLTCWKQEPDKRPTFADIS 280 (290)
T ss_pred CCHH--------------HHHHHHhCCCCCCC------------------CCCCCHHHHHHHHHHccCCcccCCCHHHHH
Confidence 2111 11111111110000 012345688999999999999999999999
Q ss_pred HHHHHhHH
Q 039533 926 HELQSIKN 933 (949)
Q Consensus 926 ~~L~~i~~ 933 (949)
+.|+++..
T Consensus 281 ~~l~~~~~ 288 (290)
T cd05045 281 KELEKMMV 288 (290)
T ss_pred HHHHHHHh
Confidence 99998864
No 100
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=100.00 E-value=5.9e-36 Score=318.52 Aligned_cols=249 Identities=23% Similarity=0.345 Sum_probs=194.7
Q ss_pred CeeeeecCceEEEEEEcCCCEEEEEEEEecCCC-cchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCccceeEeeec
Q 039533 632 NLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHH-GASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFKASVYEFM 710 (949)
Q Consensus 632 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~ 710 (949)
+.||+|+||.||+|++..+++.||+|.+..... .....+.+|++++++++||||+++++++.... ..++||||+
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-----~~~lv~e~~ 75 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQ-----PIYIVMELV 75 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCC-----CeEEEEeec
Confidence 468999999999999988899999998764332 23467899999999999999999999976544 789999999
Q ss_pred cCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEeeccccee
Q 039533 711 HYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVGDFGLARI 790 (949)
Q Consensus 711 ~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~DfG~a~~ 790 (949)
++++|.+++.. ....+++.+++.++.|++.||+|||+. +++||||||+||+++.++.+||+|||.+..
T Consensus 76 ~~~~L~~~~~~---------~~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~~ 143 (252)
T cd05084 76 QGGDFLTFLRT---------EGPRLKVKELIQMVENAAAGMEYLESK---HCIHRDLAARNCLVTEKNVLKISDFGMSRE 143 (252)
T ss_pred cCCcHHHHHHh---------CCCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccchheEEEcCCCcEEECccccCcc
Confidence 99999999862 223578999999999999999999977 899999999999999999999999999876
Q ss_pred cCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHh-CCCCCccccccCchhhhhccccCCCchhhhc
Q 039533 791 LSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVI-GKKPIDIMFEGDINLHNFGRKALPDDVMDIV 869 (949)
Q Consensus 791 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 869 (949)
..............++..|+|||.+.+..++.++|||||||++|||++ |..||....... ....+
T Consensus 144 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~--------------~~~~~ 209 (252)
T cd05084 144 EEDGVYASTGGMKQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQQ--------------TREAI 209 (252)
T ss_pred cccccccccCCCCCCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHHH--------------HHHHH
Confidence 543221111111123467999999988889999999999999999998 888885332110 11111
Q ss_pred ccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHH
Q 039533 870 DSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHELQ 929 (949)
Q Consensus 870 d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~ 929 (949)
....... ....++..+.+++.+|++.+|++|||+.||.+.|+
T Consensus 210 ~~~~~~~------------------~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 251 (252)
T cd05084 210 EQGVRLP------------------CPELCPDAVYRLMERCWEYDPGQRPSFSTVHQELQ 251 (252)
T ss_pred HcCCCCC------------------CcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHh
Confidence 1100000 00123456889999999999999999999999886
No 101
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=100.00 E-value=1.5e-36 Score=341.35 Aligned_cols=202 Identities=23% Similarity=0.328 Sum_probs=173.3
Q ss_pred cCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCC---CcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCcc
Q 039533 626 SGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQH---HGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDF 702 (949)
Q Consensus 626 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 702 (949)
++|++.+.||+|+||.||+|++..+++.||||+++... ......+.+|+++++.++||||+++++++...+ .
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~-----~ 75 (364)
T cd05599 1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDEN-----Y 75 (364)
T ss_pred CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCC-----e
Confidence 47899999999999999999999889999999997432 233456788999999999999999999976544 8
Q ss_pred ceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEE
Q 039533 703 KASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARV 782 (949)
Q Consensus 703 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl 782 (949)
.++||||+++|+|.+++. ....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||
T Consensus 76 ~~lv~E~~~~g~L~~~l~----------~~~~l~~~~~~~~~~qi~~aL~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl 142 (364)
T cd05599 76 LYLIMEYLPGGDMMTLLM----------KKDTFTEEETRFYIAETILAIDSIHKL---GYIHRDIKPDNLLLDAKGHIKL 142 (364)
T ss_pred EEEEECCCCCcHHHHHHH----------HcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEE
Confidence 999999999999999986 234589999999999999999999977 8999999999999999999999
Q ss_pred eecccceecCCCCCcc------------------------------------ccccccCccCccCccccCCCccCCccch
Q 039533 783 GDFGLARILSPDHTQT------------------------------------SSFSVKGSLGYIAPEYGVGCEVSTNGDV 826 (949)
Q Consensus 783 ~DfG~a~~~~~~~~~~------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~sDi 826 (949)
+|||+++......... ......||+.|+|||++.+..++.++||
T Consensus 143 ~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di 222 (364)
T cd05599 143 SDFGLCTGLKKSHRTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDW 222 (364)
T ss_pred eecccceeccccccccccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeee
Confidence 9999987653221100 0112359999999999999899999999
Q ss_pred HHHHHHHHHHHhCCCCCcc
Q 039533 827 YSYGILLLELVIGKKPIDI 845 (949)
Q Consensus 827 wSlGvvl~elltg~~Pf~~ 845 (949)
|||||++|||++|..||..
T Consensus 223 wSlG~il~el~~G~~Pf~~ 241 (364)
T cd05599 223 WSLGVIMYEMLVGYPPFCS 241 (364)
T ss_pred ecchhHHHHhhcCCCCCCC
Confidence 9999999999999999964
No 102
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=100.00 E-value=7.4e-36 Score=323.67 Aligned_cols=253 Identities=23% Similarity=0.261 Sum_probs=198.1
Q ss_pred CCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCC---cchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCccc
Q 039533 627 GFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHH---GASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFK 703 (949)
Q Consensus 627 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 703 (949)
+|++.++||+|+||.||+|.+..+++.||+|++..... .....+.+|+.++++++||||+++++++...+ ..
T Consensus 1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-----~~ 75 (285)
T cd05605 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKD-----AL 75 (285)
T ss_pred CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCC-----eE
Confidence 47888999999999999999988899999999864321 22345778999999999999999998875443 78
Q ss_pred eeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEe
Q 039533 704 ASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVG 783 (949)
Q Consensus 704 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~ 783 (949)
++||||+++|+|.+++... ....+++..+..++.|++.|++|||+. +|+||||||+||++++++.++|+
T Consensus 76 ~lv~e~~~~~~L~~~~~~~--------~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~l~ 144 (285)
T cd05605 76 CLVLTLMNGGDLKFHIYNM--------GNPGFDEERAVFYAAEITCGLEDLHRE---RIVYRDLKPENILLDDYGHIRIS 144 (285)
T ss_pred EEEEeccCCCcHHHHHHhc--------CcCCCCHHHHHHHHHHHHHHHHHHHHC---CcEecCCCHHHEEECCCCCEEEe
Confidence 9999999999999888521 124588999999999999999999977 89999999999999999999999
Q ss_pred ecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhccccCCC
Q 039533 784 DFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKALPD 863 (949)
Q Consensus 784 DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~ 863 (949)
|||+++........ ....|+..|+|||++.+..++.++||||+||++|||++|+.||....... ...
T Consensus 145 Dfg~~~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~-~~~--------- 211 (285)
T cd05605 145 DLGLAVEIPEGETI---RGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKV-KRE--------- 211 (285)
T ss_pred eCCCceecCCCCcc---ccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchhh-HHH---------
Confidence 99999876433221 13458999999999998889999999999999999999999996321100 000
Q ss_pred chhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCC-----CHHHHHHH
Q 039533 864 DVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRT-----NMTNVVHE 927 (949)
Q Consensus 864 ~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----s~~ev~~~ 927 (949)
.+...+...... .....+..+.+++.+|++.||++|| +++++++.
T Consensus 212 ~~~~~~~~~~~~-------------------~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~ 261 (285)
T cd05605 212 EVERRVKEDQEE-------------------YSEKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKAH 261 (285)
T ss_pred HHHHHhhhcccc-------------------cCcccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhcC
Confidence 000000000000 0012355678999999999999999 88888653
No 103
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=100.00 E-value=3.6e-36 Score=337.56 Aligned_cols=202 Identities=25% Similarity=0.316 Sum_probs=173.1
Q ss_pred cCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCC---CcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCcc
Q 039533 626 SGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQH---HGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDF 702 (949)
Q Consensus 626 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 702 (949)
++|++.+.||+|+||+||+|++..+++.||+|+++... ......+.+|+.++.+++|+||+++++++.+.. .
T Consensus 1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~-----~ 75 (363)
T cd05628 1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKL-----N 75 (363)
T ss_pred CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCC-----e
Confidence 47899999999999999999999889999999997432 223356788999999999999999999876544 7
Q ss_pred ceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEE
Q 039533 703 KASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARV 782 (949)
Q Consensus 703 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl 782 (949)
.++||||+++|+|.+++. ....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||
T Consensus 76 ~~lv~E~~~gg~L~~~l~----------~~~~l~~~~~~~~~~qi~~aL~~lH~~---givHrDlKp~NILi~~~~~vkL 142 (363)
T cd05628 76 LYLIMEFLPGGDMMTLLM----------KKDTLTEEETQFYIAETVLAIDSIHQL---GFIHRDIKPDNLLLDSKGHVKL 142 (363)
T ss_pred EEEEEcCCCCCcHHHHHH----------hcCCCCHHHHHHHHHHHHHHHHHHHhC---CeEecCCCHHHeEECCCCCEEE
Confidence 899999999999999996 234588999999999999999999977 9999999999999999999999
Q ss_pred eecccceecCCCCCc---------------------------------cccccccCccCccCccccCCCccCCccchHHH
Q 039533 783 GDFGLARILSPDHTQ---------------------------------TSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSY 829 (949)
Q Consensus 783 ~DfG~a~~~~~~~~~---------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSl 829 (949)
+|||+++........ .......||+.|+|||++.+..++.++|||||
T Consensus 143 ~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSl 222 (363)
T cd05628 143 SDFGLCTGLKKAHRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSL 222 (363)
T ss_pred eeccCcccccccccccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhh
Confidence 999998764321100 00113469999999999999899999999999
Q ss_pred HHHHHHHHhCCCCCcc
Q 039533 830 GILLLELVIGKKPIDI 845 (949)
Q Consensus 830 Gvvl~elltg~~Pf~~ 845 (949)
||++|||++|+.||..
T Consensus 223 Gvil~ell~G~~Pf~~ 238 (363)
T cd05628 223 GVIMYEMLIGYPPFCS 238 (363)
T ss_pred HHHHHHHHhCCCCCCC
Confidence 9999999999999964
No 104
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=100.00 E-value=5.7e-36 Score=353.36 Aligned_cols=271 Identities=20% Similarity=0.282 Sum_probs=206.6
Q ss_pred cCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCC---cchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCcc
Q 039533 626 SGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHH---GASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDF 702 (949)
Q Consensus 626 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 702 (949)
++|++.++||+|+||.||+|++..+++.||+|+++.... ...+++.+|++++++++||||+++++++.+.+ .
T Consensus 2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~-----~ 76 (932)
T PRK13184 2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGD-----P 76 (932)
T ss_pred CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCC-----E
Confidence 579999999999999999999998899999999874322 22457899999999999999999999976544 7
Q ss_pred ceeEeeeccCCChhhhcCCCCCCCcc-ccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceE
Q 039533 703 KASVYEFMHYGSLEEWLHPFTGEDEI-DEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTAR 781 (949)
Q Consensus 703 ~~lv~e~~~~gsL~~~l~~~~~~~~~-~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~k 781 (949)
.++||||+++|+|.+++......... .......++..++.++.|+++||+|||+. +|+||||||+||+++.++.+|
T Consensus 77 lyLVMEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~---GIIHRDLKPeNILLd~dg~vK 153 (932)
T PRK13184 77 VYYTMPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSK---GVLHRDLKPDNILLGLFGEVV 153 (932)
T ss_pred EEEEEEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHC---CccccCCchheEEEcCCCCEE
Confidence 89999999999999998632111111 11234567888999999999999999977 899999999999999999999
Q ss_pred EeecccceecCCCCC----------------ccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCcc
Q 039533 782 VGDFGLARILSPDHT----------------QTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDI 845 (949)
Q Consensus 782 l~DfG~a~~~~~~~~----------------~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~ 845 (949)
|+|||+++....... ........||+.|+|||++.+..++.++|||||||++|||+||+.||..
T Consensus 154 LiDFGLAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~ 233 (932)
T PRK13184 154 ILDWGAAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRR 233 (932)
T ss_pred EEecCcceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCC
Confidence 999999987621110 0011124699999999999999999999999999999999999999964
Q ss_pred ccccCchhhhhccccCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCC-CHHHH
Q 039533 846 MFEGDINLHNFGRKALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRT-NMTNV 924 (949)
Q Consensus 846 ~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-s~~ev 924 (949)
......... .....+. ......+.+..+.+++.+|++.||++|| +++++
T Consensus 234 ~~~~ki~~~-----------------~~i~~P~-------------~~~p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeL 283 (932)
T PRK13184 234 KKGRKISYR-----------------DVILSPI-------------EVAPYREIPPFLSQIAMKALAVDPAERYSSVQEL 283 (932)
T ss_pred cchhhhhhh-----------------hhccChh-------------hccccccCCHHHHHHHHHHccCChhhCcCHHHHH
Confidence 211100000 0000000 0000123456688999999999999996 67788
Q ss_pred HHHHHHhHHh
Q 039533 925 VHELQSIKNI 934 (949)
Q Consensus 925 ~~~L~~i~~~ 934 (949)
.+.|+...+.
T Consensus 284 l~~Le~~lq~ 293 (932)
T PRK13184 284 KQDLEPHLQG 293 (932)
T ss_pred HHHHHHHHhc
Confidence 8888876553
No 105
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=100.00 E-value=5e-36 Score=323.84 Aligned_cols=263 Identities=24% Similarity=0.361 Sum_probs=202.1
Q ss_pred HhcCCCCCCeeeeecCceEEEEEEcC-----CCEEEEEEEEecCCC-cchHHHHHHHHHHHhcCCCcceeEEeeeecccc
Q 039533 624 ATSGFSSANLVGVGSFGSVYKGIIDE-----GRTTIAVKVFNLQHH-GASRSFIAECKALKSIRHRNLVKVLTACLGADY 697 (949)
Q Consensus 624 ~~~~y~~~~~lg~G~~g~Vy~~~~~~-----~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 697 (949)
++++|.+.+.||+|++|.||+|.+.. .+..||+|.+..... .....+.+|+.++++++|+||+++++++.+.+
T Consensus 4 ~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~- 82 (277)
T cd05036 4 PRDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFERL- 82 (277)
T ss_pred CHHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCC-
Confidence 35678999999999999999999976 678899998864432 23456899999999999999999999876544
Q ss_pred cCCccceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCC
Q 039533 698 RGNDFKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDY 777 (949)
Q Consensus 698 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~ 777 (949)
..++||||+++++|.+++....... .....+++.+++.++.||+.|++|||+. +++||||||+||+++.+
T Consensus 83 ----~~~lv~e~~~g~~L~~~i~~~~~~~---~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~nil~~~~ 152 (277)
T cd05036 83 ----PRFILLELMAGGDLKSFLRENRPRP---ERPSSLTMKDLLFCARDVAKGCKYLEEN---HFIHRDIAARNCLLTCK 152 (277)
T ss_pred ----CcEEEEecCCCCCHHHHHHHhCCCC---CCCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccchheEEEecc
Confidence 6799999999999999997432111 1234689999999999999999999977 89999999999999865
Q ss_pred C---ceEEeecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHh-CCCCCccccccCchh
Q 039533 778 M---TARVGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVI-GKKPIDIMFEGDINL 853 (949)
Q Consensus 778 ~---~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~ellt-g~~Pf~~~~~~~~~~ 853 (949)
+ .+||+|||.++................+..|+|||++.+..++.++|||||||++|||++ |+.||+...... .
T Consensus 153 ~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~~--~ 230 (277)
T cd05036 153 GPGRVAKIADFGMARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQE--V 230 (277)
T ss_pred CCCcceEeccCccccccCCccceecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHH--H
Confidence 4 699999999987643322111112224568999999998889999999999999999997 999986432111 1
Q ss_pred hhhccccCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHH
Q 039533 854 HNFGRKALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHELQ 929 (949)
Q Consensus 854 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~ 929 (949)
.+.+....... ....++..+.+++.+|++.+|++||++.||++.|+
T Consensus 231 ------------~~~~~~~~~~~------------------~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~l~ 276 (277)
T cd05036 231 ------------MEFVTGGGRLD------------------PPKGCPGPVYRIMTDCWQHTPEDRPNFATILERIQ 276 (277)
T ss_pred ------------HHHHHcCCcCC------------------CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHhh
Confidence 11111000000 00123456889999999999999999999999885
No 106
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=100.00 E-value=4.7e-36 Score=321.14 Aligned_cols=256 Identities=24% Similarity=0.394 Sum_probs=201.6
Q ss_pred hcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCCcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCccce
Q 039533 625 TSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFKA 704 (949)
Q Consensus 625 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 704 (949)
.++|++.++||+|++|.||+|... ++..||+|.+.... ...+.+.+|+.++++++|+||+++++++...+ ..+
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~-~~~~v~iK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-----~~~ 77 (261)
T cd05072 5 RESIKLVKKLGAGQFGEVWMGYYN-NSTKVAVKTLKPGT-MSVQAFLEEANLMKTLQHDKLVRLYAVVTKEE-----PIY 77 (261)
T ss_pred hHHeEEeeecCCcCCceEEEEEec-CCceEEEEEccCCc-hhHHHHHHHHHHHHhCCCCCeeeEEEEEcCCC-----CcE
Confidence 357899999999999999999976 56789999876433 23568899999999999999999998865443 689
Q ss_pred eEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEee
Q 039533 705 SVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVGD 784 (949)
Q Consensus 705 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~D 784 (949)
+||||+++++|.+++... ....+++.+++.++.|++.||+|||+. +++||||||+||+++.++.+||+|
T Consensus 78 lv~e~~~~~~L~~~l~~~--------~~~~~~~~~~~~~~~~l~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l~d 146 (261)
T cd05072 78 IITEYMAKGSLLDFLKSD--------EGGKVLLPKLIDFSAQIAEGMAYIERK---NYIHRDLRAANVLVSESLMCKIAD 146 (261)
T ss_pred EEEecCCCCcHHHHHHHh--------cCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhhEEecCCCcEEECC
Confidence 999999999999998631 234578889999999999999999977 899999999999999999999999
Q ss_pred cccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHh-CCCCCccccccCchhhhhccccCCC
Q 039533 785 FGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVI-GKKPIDIMFEGDINLHNFGRKALPD 863 (949)
Q Consensus 785 fG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~ 863 (949)
||.++......... .....++..|+|||+..+..++.++|||||||++|||+| |+.||....... .....
T Consensus 147 fg~~~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~--~~~~~------ 217 (261)
T cd05072 147 FGLARVIEDNEYTA-REGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNSD--VMSAL------ 217 (261)
T ss_pred CccceecCCCceec-cCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHHH--HHHHH------
Confidence 99998765432211 112336778999999988889999999999999999998 999985321111 00000
Q ss_pred chhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHHh
Q 039533 864 DVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHELQSI 931 (949)
Q Consensus 864 ~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i 931 (949)
..... .+.....+..+.+++.+|+..+|++||+++++.+.|+++
T Consensus 218 ------~~~~~------------------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 261 (261)
T cd05072 218 ------QRGYR------------------MPRMENCPDELYDIMKTCWKEKAEERPTFDYLQSVLDDF 261 (261)
T ss_pred ------HcCCC------------------CCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHhcC
Confidence 00000 000012345678999999999999999999999999763
No 107
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-36 Score=324.82 Aligned_cols=254 Identities=25% Similarity=0.402 Sum_probs=212.0
Q ss_pred CCCCeeeeecCceEEEEEEcCC----CEEEEEEEEecCC-CcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCccc
Q 039533 629 SSANLVGVGSFGSVYKGIIDEG----RTTIAVKVFNLQH-HGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFK 703 (949)
Q Consensus 629 ~~~~~lg~G~~g~Vy~~~~~~~----~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 703 (949)
+..+.||+|-||.||+|....- .-.||||..+... .+..+.|..|..+|++++||||++++|.|.+. ..
T Consensus 392 tl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~e~------P~ 465 (974)
T KOG4257|consen 392 TLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCVEQ------PM 465 (974)
T ss_pred cHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeeecc------ce
Confidence 4457899999999999998532 3358999987643 34467899999999999999999999999754 47
Q ss_pred eeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEe
Q 039533 704 ASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVG 783 (949)
Q Consensus 704 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~ 783 (949)
++|||.++.|.|..|++. ....++......++.||+.||+|||+. .+|||||..+|||+.....+|++
T Consensus 466 WivmEL~~~GELr~yLq~---------nk~sL~l~tL~ly~~Qi~talaYLeSk---rfVHRDIAaRNiLVsSp~CVKLa 533 (974)
T KOG4257|consen 466 WIVMELAPLGELREYLQQ---------NKDSLPLRTLTLYCYQICTALAYLESK---RFVHRDIAARNILVSSPQCVKLA 533 (974)
T ss_pred eEEEecccchhHHHHHHh---------ccccchHHHHHHHHHHHHHHHHHHHhh---chhhhhhhhhheeecCcceeeec
Confidence 999999999999999983 234588899999999999999999987 89999999999999999999999
Q ss_pred ecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHh-CCCCCccccccCchhhhhccccCC
Q 039533 784 DFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVI-GKKPIDIMFEGDINLHNFGRKALP 862 (949)
Q Consensus 784 DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~ 862 (949)
|||+++.+.++.....+ ...-..-|||||.+...+++.++|||-|||++||++. |..||......+...
T Consensus 534 DFGLSR~~ed~~yYkaS-~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsDVI~--------- 603 (974)
T KOG4257|consen 534 DFGLSRYLEDDAYYKAS-RGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSDVIG--------- 603 (974)
T ss_pred ccchhhhccccchhhcc-ccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCccccccccceEE---------
Confidence 99999998877665543 2234567999999999999999999999999999997 999997543332111
Q ss_pred CchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHHhHH
Q 039533 863 DDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHELQSIKN 933 (949)
Q Consensus 863 ~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~~ 933 (949)
....+.|.+.+..||+.+..++.+||+.||.+||++.|+...|+.+..
T Consensus 604 -----------------------~iEnGeRlP~P~nCPp~LYslmskcWayeP~kRPrftei~~~lsdv~q 651 (974)
T KOG4257|consen 604 -----------------------HIENGERLPCPPNCPPALYSLMSKCWAYEPSKRPRFTEIKAILSDVLQ 651 (974)
T ss_pred -----------------------EecCCCCCCCCCCCChHHHHHHHHHhccCcccCCcHHHHHHHHHHHHH
Confidence 011233444556889999999999999999999999999999999876
No 108
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-36 Score=323.30 Aligned_cols=264 Identities=22% Similarity=0.340 Sum_probs=210.4
Q ss_pred cCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCCcc-hHHHHHHHHHHHhcCCCcceeEEeeeecccccCCccce
Q 039533 626 SGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHGA-SRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFKA 704 (949)
Q Consensus 626 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 704 (949)
+...+.++||+|-||.|.+++.. ++..||||.++...... .++|.+|+++|.+++||||++++|+|...+ ..+
T Consensus 538 s~L~~~ekiGeGqFGEVhLCeve-g~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~De-----Pic 611 (807)
T KOG1094|consen 538 SRLRFKEKIGEGQFGEVHLCEVE-GPLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQDD-----PLC 611 (807)
T ss_pred hheehhhhhcCcccceeEEEEec-CceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeecCC-----chH
Confidence 34567899999999999999987 47999999998665444 478999999999999999999999998766 789
Q ss_pred eEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEee
Q 039533 705 SVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVGD 784 (949)
Q Consensus 705 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~D 784 (949)
+++|||++|+|.+|+..... ..+..+...+|+.|||.|++||.+- ++||||+.++|+|+|.++++||+|
T Consensus 612 mI~EYmEnGDLnqFl~ahea--------pt~~t~~~vsi~tqiasgmaYLes~---nfVHrd~a~rNcLv~~e~~iKiad 680 (807)
T KOG1094|consen 612 MITEYMENGDLNQFLSAHEL--------PTAETAPGVSICTQIASGMAYLESL---NFVHRDLATRNCLVDGEFTIKIAD 680 (807)
T ss_pred HHHHHHhcCcHHHHHHhccC--------cccccchhHHHHHHHHHHHHHHHhh---chhhccccccceeecCcccEEecC
Confidence 99999999999999974321 1234556677999999999999976 999999999999999999999999
Q ss_pred cccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHh--CCCCCccccccCchhhhhccccCC
Q 039533 785 FGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVI--GKKPIDIMFEGDINLHNFGRKALP 862 (949)
Q Consensus 785 fG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~ellt--g~~Pf~~~~~~~~~~~~~~~~~~~ 862 (949)
||.++-+............+-..+|||||.+.-+++++++|||+||+++||+++ .+.||....++ ..++-.....+
T Consensus 681 fgmsR~lysg~yy~vqgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e--~vven~~~~~~ 758 (807)
T KOG1094|consen 681 FGMSRNLYSGDYYRVQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDE--QVVENAGEFFR 758 (807)
T ss_pred cccccccccCCceeeecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhHH--HHHHhhhhhcC
Confidence 999997665555444444556789999999999999999999999999999876 78898654332 11111111121
Q ss_pred CchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHHh
Q 039533 863 DDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHELQSI 931 (949)
Q Consensus 863 ~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i 931 (949)
..-...+ ...+.-|+..+.+++.+||..|-++||+++++...|++.
T Consensus 759 ~~~~~~~-----------------------l~~P~~cp~~lyelml~Cw~~es~~RPsFe~lh~~lq~~ 804 (807)
T KOG1094|consen 759 DQGRQVV-----------------------LSRPPACPQGLYELMLRCWRRESEQRPSFEQLHLFLQED 804 (807)
T ss_pred CCCccee-----------------------ccCCCcCcHHHHHHHHHHhchhhhcCCCHHHHHHHHHHh
Confidence 1111111 112235677899999999999999999999999988764
No 109
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=100.00 E-value=8.6e-39 Score=341.51 Aligned_cols=368 Identities=28% Similarity=0.457 Sum_probs=265.5
Q ss_pred CCCCCCceeeccCceec-cccCCcccCcccCcEEeeccccccCcCCCCCCCCccceeecCCCccccccccccccCCCCCc
Q 039533 86 GNLSFLKQLYLQVNSFT-HEIPSEIGGLRRLKVLALNNNSICGEIPTNISRCSTLIPIHPQNNQLVGKILSRFSSLSKTE 164 (949)
Q Consensus 86 ~~l~~L~~L~L~~n~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~L~~L~ 164 (949)
+-|+..+-.|+++|.|+ +..|.....++++++|.|...++. .+|+.++.|.+|++|.+++|++.. +-+.++.|+.|+
T Consensus 4 gVLpFVrGvDfsgNDFsg~~FP~~v~qMt~~~WLkLnrt~L~-~vPeEL~~lqkLEHLs~~HN~L~~-vhGELs~Lp~LR 81 (1255)
T KOG0444|consen 4 GVLPFVRGVDFSGNDFSGDRFPHDVEQMTQMTWLKLNRTKLE-QVPEELSRLQKLEHLSMAHNQLIS-VHGELSDLPRLR 81 (1255)
T ss_pred cccceeecccccCCcCCCCcCchhHHHhhheeEEEechhhhh-hChHHHHHHhhhhhhhhhhhhhHh-hhhhhccchhhH
Confidence 34566677777888887 457777888888888888888877 788888888888888888887763 345667777888
Q ss_pred EEECCCCCCCC-CCCCCcCCCCCccEEeccccccCCCCCCcccCCCccccccccCcccccccccccCCCCChhhhccccc
Q 039533 165 ILNLGSNHLTG-SIPSSLGNLSSIHTISLAYNNLDGTIPNSFGWFENLVFLSLAANNLSVVENKLTGEVPSLEKLQRLQH 243 (949)
Q Consensus 165 ~L~Ls~N~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~l~~~~~~l~~l~~L~~ 243 (949)
.+++.+|++.. -+|..+..+..|+.||||+|+++ ..|..+..-+++-.|+||+|+|..|||.+ +.+|+
T Consensus 82 sv~~R~N~LKnsGiP~diF~l~dLt~lDLShNqL~-EvP~~LE~AKn~iVLNLS~N~IetIPn~l------finLt---- 150 (1255)
T KOG0444|consen 82 SVIVRDNNLKNSGIPTDIFRLKDLTILDLSHNQLR-EVPTNLEYAKNSIVLNLSYNNIETIPNSL------FINLT---- 150 (1255)
T ss_pred HHhhhccccccCCCCchhcccccceeeecchhhhh-hcchhhhhhcCcEEEEcccCccccCCchH------HHhhH----
Confidence 88888887763 35667777888888888888887 77877877888888888888887776653 23333
Q ss_pred cccccCCCCCCCCCCcchhccccccCcccEEEccCCCCCccCCchhhcccccccEEEccCccccCCCCCCCCCCCcccEE
Q 039533 244 FTITSNSLGSGGNDDLSFLCSLTNATRLTWMHINSNNFGGLLPGCISNLSKTIKTLFLNNNKIYGSIPAGIGNFVNLQRL 323 (949)
Q Consensus 244 L~l~~N~l~~~~~~~~~~~~~l~~~~~L~~L~L~~N~l~~~~p~~~~~l~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 323 (949)
.|-+||||+|++.. +|+.+..+ ..|++|.|++|.+...--..+-.+++|+.|
T Consensus 151 --------------------------DLLfLDLS~NrLe~-LPPQ~RRL-~~LqtL~Ls~NPL~hfQLrQLPsmtsL~vL 202 (1255)
T KOG0444|consen 151 --------------------------DLLFLDLSNNRLEM-LPPQIRRL-SMLQTLKLSNNPLNHFQLRQLPSMTSLSVL 202 (1255)
T ss_pred --------------------------hHhhhccccchhhh-cCHHHHHH-hhhhhhhcCCChhhHHHHhcCccchhhhhh
Confidence 33444444444442 33334444 246666666666543333334456677777
Q ss_pred Eeecceec-ccCCCcccccCCCCEEecCCcccccccCcccccccccceeecccccccccCCCCCCCCCCCcEEEeeCccc
Q 039533 324 DMWNNQLS-GTIPPAIGELQNLKILGLNRNKLSGNIPPSIGNLKMLLNLFLNDNFLEVSIPSSLGQCESLIEINLSNNNL 402 (949)
Q Consensus 324 ~L~~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l 402 (949)
.+++.+=+ .-+|.++..+.+|..+|||.|.+. ..|+.+.++++|+.|+|++|+|+ .+.-......+|+.|+||+|++
T Consensus 203 hms~TqRTl~N~Ptsld~l~NL~dvDlS~N~Lp-~vPecly~l~~LrrLNLS~N~it-eL~~~~~~W~~lEtLNlSrNQL 280 (1255)
T KOG0444|consen 203 HMSNTQRTLDNIPTSLDDLHNLRDVDLSENNLP-IVPECLYKLRNLRRLNLSGNKIT-ELNMTEGEWENLETLNLSRNQL 280 (1255)
T ss_pred hcccccchhhcCCCchhhhhhhhhccccccCCC-cchHHHhhhhhhheeccCcCcee-eeeccHHHHhhhhhhccccchh
Confidence 77765533 356777777777777777777777 67777777777777777777777 4444556667777778888887
Q ss_pred cCCCCCcccCCcccceeeccCCCccCC-CCccccccccccceeeeccccccccCCcccccccchhhcccCccccccccCC
Q 039533 403 SGTIPPQFFSLSSLSISLDWSRNKLTG-SLPIEVGKLKILEFLYVYENRLEGEIPSTFGNCIRLEQLGMGGNLFQGPISS 481 (949)
Q Consensus 403 ~~~~p~~~~~l~~l~~~L~ls~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~ 481 (949)
+ .+|+.++.++.| +.|.+.+|+++- -+|..++.+.+|+++..++|.+. .+|+.++.|..|+.|.|++|++- .+|+
T Consensus 281 t-~LP~avcKL~kL-~kLy~n~NkL~FeGiPSGIGKL~~Levf~aanN~LE-lVPEglcRC~kL~kL~L~~NrLi-TLPe 356 (1255)
T KOG0444|consen 281 T-VLPDAVCKLTKL-TKLYANNNKLTFEGIPSGIGKLIQLEVFHAANNKLE-LVPEGLCRCVKLQKLKLDHNRLI-TLPE 356 (1255)
T ss_pred c-cchHHHhhhHHH-HHHHhccCcccccCCccchhhhhhhHHHHhhccccc-cCchhhhhhHHHHHhccccccee-echh
Confidence 7 777777777777 567777777653 47888888888888888888888 88888888888888888888888 6788
Q ss_pred CcCCCCCCCEEECCCCcCC
Q 039533 482 SLGSLRGLRVLDLSQNNLS 500 (949)
Q Consensus 482 ~~~~l~~L~~L~Ls~N~l~ 500 (949)
.+.-|+.|+.|||..|.=-
T Consensus 357 aIHlL~~l~vLDlreNpnL 375 (1255)
T KOG0444|consen 357 AIHLLPDLKVLDLRENPNL 375 (1255)
T ss_pred hhhhcCCcceeeccCCcCc
Confidence 8888888888888888644
No 110
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=100.00 E-value=4.6e-36 Score=331.44 Aligned_cols=245 Identities=22% Similarity=0.273 Sum_probs=190.5
Q ss_pred CCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCC---CcchHHHHHHHHHH---HhcCCCcceeEEeeeecccccCCc
Q 039533 628 FSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQH---HGASRSFIAECKAL---KSIRHRNLVKVLTACLGADYRGND 701 (949)
Q Consensus 628 y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l---~~l~h~niv~~~~~~~~~~~~~~~ 701 (949)
|++.+.||+|+||.||+|.+..+++.||||+++... ....+.+.+|++++ ++++||||+++++++...+
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~----- 75 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTED----- 75 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCC-----
Confidence 677899999999999999999889999999997432 22335566776665 4567999999999976544
Q ss_pred cceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceE
Q 039533 702 FKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTAR 781 (949)
Q Consensus 702 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~k 781 (949)
..++||||+++++|..++. ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+|
T Consensus 76 ~~~lv~E~~~~~~L~~~~~-----------~~~l~~~~~~~~~~qi~~al~~lH~~---~ivHrdlkp~Nill~~~~~~k 141 (324)
T cd05589 76 HVCFVMEYAAGGDLMMHIH-----------TDVFSEPRAVFYAACVVLGLQYLHEN---KIVYRDLKLDNLLLDTEGFVK 141 (324)
T ss_pred EEEEEEcCCCCCcHHHHhh-----------cCCCCHHHHHHHHHHHHHHHHHHHhC---CeEecCCCHHHeEECCCCcEE
Confidence 7899999999999998875 23589999999999999999999977 999999999999999999999
Q ss_pred EeecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhccccC
Q 039533 782 VGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKAL 861 (949)
Q Consensus 782 l~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~ 861 (949)
|+|||+++........ .....|++.|+|||++.+..++.++|||||||++|||++|+.||....... .
T Consensus 142 L~Dfg~~~~~~~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~~~--~-------- 209 (324)
T cd05589 142 IADFGLCKEGMGFGDR--TSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEEE--V-------- 209 (324)
T ss_pred eCcccCCccCCCCCCc--ccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCHHH--H--------
Confidence 9999998754322211 123568999999999999899999999999999999999999996331110 0
Q ss_pred CCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCC-----HHHHHH
Q 039533 862 PDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTN-----MTNVVH 926 (949)
Q Consensus 862 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs-----~~ev~~ 926 (949)
...+...... . ....+..+.+++.+|++.||++||+ +.++++
T Consensus 210 ---~~~i~~~~~~-~-------------------p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~ 256 (324)
T cd05589 210 ---FDSIVNDEVR-Y-------------------PRFLSREAISIMRRLLRRNPERRLGSGEKDAEDVKK 256 (324)
T ss_pred ---HHHHHhCCCC-C-------------------CCCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhh
Confidence 0000000000 0 0122455788999999999999994 555544
No 111
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=100.00 E-value=2.1e-36 Score=334.26 Aligned_cols=243 Identities=21% Similarity=0.241 Sum_probs=191.7
Q ss_pred CeeeeecCceEEEEEEcCCCEEEEEEEEecCC---CcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCccceeEee
Q 039533 632 NLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQH---HGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFKASVYE 708 (949)
Q Consensus 632 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e 708 (949)
+.||+|+||.||+|++..+++.||+|+++... ......+.+|+++++.++||||+++++++...+ ..++|||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~-----~~~lv~E 75 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHD-----RLCFVME 75 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCC-----EEEEEEe
Confidence 47999999999999998899999999997432 223456788999999999999999998865444 7899999
Q ss_pred eccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEeecccc
Q 039533 709 FMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVGDFGLA 788 (949)
Q Consensus 709 ~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~DfG~a 788 (949)
|+++|+|.+++. ....+++..+..++.|++.||+|||+. .+|+||||||+||+++.++.+||+|||++
T Consensus 76 ~~~~~~L~~~l~----------~~~~l~~~~~~~~~~qi~~aL~~lH~~--~~ivHrDikp~NIll~~~~~~kL~Dfg~~ 143 (325)
T cd05594 76 YANGGELFFHLS----------RERVFSEDRARFYGAEIVSALDYLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLC 143 (325)
T ss_pred CCCCCcHHHHHH----------hcCCCCHHHHHHHHHHHHHHHHHHHhc--CCEEecCCCCCeEEECCCCCEEEecCCCC
Confidence 999999999886 234588999999999999999999962 28999999999999999999999999998
Q ss_pred eecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhccccCCCchhhh
Q 039533 789 RILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKALPDDVMDI 868 (949)
Q Consensus 789 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~ 868 (949)
+......... ....||..|+|||++.+..++.++|||||||++|||++|+.||....... .... +
T Consensus 144 ~~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~~--~~~~-----------i 208 (325)
T cd05594 144 KEGIKDGATM--KTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEK--LFEL-----------I 208 (325)
T ss_pred eecCCCCccc--ccccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCHHH--HHHH-----------H
Confidence 7543222211 13459999999999999899999999999999999999999995321110 0000 0
Q ss_pred cccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCC-----CHHHHHH
Q 039533 869 VDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRT-----NMTNVVH 926 (949)
Q Consensus 869 ~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----s~~ev~~ 926 (949)
..... ..+ ......+.+++.+|++.||++|+ ++.|+++
T Consensus 209 ~~~~~-~~p-------------------~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~ 251 (325)
T cd05594 209 LMEEI-RFP-------------------RTLSPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQ 251 (325)
T ss_pred hcCCC-CCC-------------------CCCCHHHHHHHHHHhhcCHHHhCCCCCCCHHHHhc
Confidence 00000 000 02234578899999999999996 8998875
No 112
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=100.00 E-value=1.4e-36 Score=340.02 Aligned_cols=252 Identities=22% Similarity=0.262 Sum_probs=200.6
Q ss_pred cCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCC---CcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCcc
Q 039533 626 SGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQH---HGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDF 702 (949)
Q Consensus 626 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 702 (949)
++|.+.+.||+|+||+||+|++..+++.||||+++... ......+.+|++++..++||||+++++++.+.+ .
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~-----~ 75 (350)
T cd05573 1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEE-----H 75 (350)
T ss_pred CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCC-----e
Confidence 47899999999999999999999899999999997432 234467889999999999999999998865443 7
Q ss_pred ceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEE
Q 039533 703 KASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARV 782 (949)
Q Consensus 703 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl 782 (949)
.++||||+++++|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||
T Consensus 76 ~~lv~e~~~~~~L~~~l~~----------~~~l~~~~~~~i~~qi~~aL~~LH~~---giiH~Dlkp~NIll~~~~~~kL 142 (350)
T cd05573 76 LYLVMEYMPGGDLMNLLIR----------KDVFPEETARFYIAELVLALDSVHKL---GFIHRDIKPDNILIDADGHIKL 142 (350)
T ss_pred EEEEEcCCCCCCHHHHHHH----------cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEe
Confidence 8999999999999999962 24688999999999999999999976 9999999999999999999999
Q ss_pred eecccceecCCCC---------------------------CccccccccCccCccCccccCCCccCCccchHHHHHHHHH
Q 039533 783 GDFGLARILSPDH---------------------------TQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLE 835 (949)
Q Consensus 783 ~DfG~a~~~~~~~---------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~e 835 (949)
+|||+++...... .........||+.|+|||++.+..++.++|||||||++||
T Consensus 143 ~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~e 222 (350)
T cd05573 143 ADFGLCKKMNKAKDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYE 222 (350)
T ss_pred ecCCCCccCcccCcccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhh
Confidence 9999998765433 0011123458999999999999999999999999999999
Q ss_pred HHhCCCCCccccccCchhhhhccccCCCchhhhcc--cCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccC
Q 039533 836 LVIGKKPIDIMFEGDINLHNFGRKALPDDVMDIVD--SSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSME 913 (949)
Q Consensus 836 lltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~d--~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~ 913 (949)
|++|+.||....... .. ..+.. ..... +.....+..+.+++.+|+.
T Consensus 223 ll~g~~Pf~~~~~~~-~~------------~~i~~~~~~~~~------------------p~~~~~~~~~~~li~~ll~- 270 (350)
T cd05573 223 MLYGFPPFYSDTLQE-TY------------NKIINWKESLRF------------------PPDPPVSPEAIDLICRLLC- 270 (350)
T ss_pred hccCCCCCCCCCHHH-HH------------HHHhccCCcccC------------------CCCCCCCHHHHHHHHHHcc-
Confidence 999999996432110 00 00000 00000 0000134567889999997
Q ss_pred CCCCCCC-HHHHHHH
Q 039533 914 LPQDRTN-MTNVVHE 927 (949)
Q Consensus 914 dP~~RPs-~~ev~~~ 927 (949)
||++||+ ++|+++.
T Consensus 271 dp~~R~~s~~~ll~h 285 (350)
T cd05573 271 DPEDRLGSFEEIKSH 285 (350)
T ss_pred ChhhcCCCHHHHhcC
Confidence 9999999 9999874
No 113
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=100.00 E-value=2.5e-36 Score=338.80 Aligned_cols=256 Identities=20% Similarity=0.228 Sum_probs=198.4
Q ss_pred HHhcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCC---CcchHHHHHHHHHHHhcCCCcceeEEeeeecccccC
Q 039533 623 NATSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQH---HGASRSFIAECKALKSIRHRNLVKVLTACLGADYRG 699 (949)
Q Consensus 623 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 699 (949)
...++|++.+.||+|+||.||+|++..+++.||+|+++... ....+.+.+|+.+++.++||||+++++++....
T Consensus 40 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~--- 116 (370)
T cd05596 40 MKAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDK--- 116 (370)
T ss_pred CCHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCC---
Confidence 34568999999999999999999999899999999996432 223355788999999999999999998865444
Q ss_pred CccceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCc
Q 039533 700 NDFKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMT 779 (949)
Q Consensus 700 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~ 779 (949)
..++||||+++|+|.+++.. ..++...+..++.|++.||+|||+. +|+||||||+|||++.++.
T Consensus 117 --~~~lv~Ey~~gg~L~~~l~~-----------~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~ 180 (370)
T cd05596 117 --YLYMVMEYMPGGDLVNLMSN-----------YDIPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGH 180 (370)
T ss_pred --EEEEEEcCCCCCcHHHHHHh-----------cCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEcCCCC
Confidence 79999999999999999862 2477888999999999999999977 9999999999999999999
Q ss_pred eEEeecccceecCCCCCccccccccCccCccCccccCCC----ccCCccchHHHHHHHHHHHhCCCCCccccccCchhhh
Q 039533 780 ARVGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGC----EVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHN 855 (949)
Q Consensus 780 ~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~ 855 (949)
+||+|||.++......... .....||+.|+|||++.+. .++.++|||||||++|||++|+.||....... .
T Consensus 181 ~kL~DfG~~~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~-~--- 255 (370)
T cd05596 181 LKLADFGTCMKMDANGMVR-CDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVG-T--- 255 (370)
T ss_pred EEEEeccceeeccCCCccc-CCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHHH-H---
Confidence 9999999998765432211 1234699999999987653 47899999999999999999999996321110 0
Q ss_pred hccccCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCC--CCCHHHHHHH
Q 039533 856 FGRKALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQD--RTNMTNVVHE 927 (949)
Q Consensus 856 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~--RPs~~ev~~~ 927 (949)
...+.+.... ..++.....+..+.+++.+|+..+|++ ||++.|+++.
T Consensus 256 ---------~~~i~~~~~~----------------~~~~~~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~h 304 (370)
T cd05596 256 ---------YSKIMDHKNS----------------LTFPDDIEISKQAKDLICAFLTDREVRLGRNGVDEIKSH 304 (370)
T ss_pred ---------HHHHHcCCCc----------------CCCCCcCCCCHHHHHHHHHHccChhhccCCCCHHHHhcC
Confidence 0111110000 000000123456788999999999988 9999999653
No 114
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=100.00 E-value=5.8e-36 Score=330.65 Aligned_cols=242 Identities=22% Similarity=0.255 Sum_probs=190.2
Q ss_pred CCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCC---CcchHHHHHHHHHHHhcCCC-cceeEEeeeecccccCCcc
Q 039533 627 GFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQH---HGASRSFIAECKALKSIRHR-NLVKVLTACLGADYRGNDF 702 (949)
Q Consensus 627 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~-niv~~~~~~~~~~~~~~~~ 702 (949)
+|++.+.||+|+||.||+|++..+++.||||+++... ....+.+..|.+++..+.|+ +|+++++++...+ .
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~-----~ 75 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMD-----R 75 (324)
T ss_pred CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCC-----E
Confidence 5888999999999999999999888999999997432 23346678899999999765 5788888765443 7
Q ss_pred ceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEE
Q 039533 703 KASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARV 782 (949)
Q Consensus 703 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl 782 (949)
.++||||+++|+|.+++. ....+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||
T Consensus 76 ~~lv~E~~~~g~L~~~~~----------~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~Nill~~~~~~kL 142 (324)
T cd05587 76 LYFVMEYVNGGDLMYHIQ----------QVGKFKEPHAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDAEGHIKI 142 (324)
T ss_pred EEEEEcCCCCCcHHHHHH----------HcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEEcCCCCEEE
Confidence 899999999999999986 234578899999999999999999977 9999999999999999999999
Q ss_pred eecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhccccCC
Q 039533 783 GDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKALP 862 (949)
Q Consensus 783 ~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~ 862 (949)
+|||+++........ .....||..|+|||++.+..++.++||||+||++|||+||+.||....... ..
T Consensus 143 ~Dfg~~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~--~~-------- 210 (324)
T cd05587 143 ADFGMCKENIFGGKT--TRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDE--LF-------- 210 (324)
T ss_pred eecCcceecCCCCCc--eeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHH--HH--------
Confidence 999998754322211 123458999999999999899999999999999999999999996332110 00
Q ss_pred CchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCH
Q 039533 863 DDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNM 921 (949)
Q Consensus 863 ~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~ 921 (949)
..+.+... ..+ ......+.+++.+|++.||++||+.
T Consensus 211 ---~~i~~~~~-~~~-------------------~~~~~~~~~li~~~l~~~P~~R~~~ 246 (324)
T cd05587 211 ---QSIMEHNV-SYP-------------------KSLSKEAVSICKGLLTKHPAKRLGC 246 (324)
T ss_pred ---HHHHcCCC-CCC-------------------CCCCHHHHHHHHHHhhcCHHHcCCC
Confidence 00000000 000 0123457889999999999999976
No 115
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=100.00 E-value=8.3e-36 Score=323.99 Aligned_cols=268 Identities=22% Similarity=0.339 Sum_probs=202.8
Q ss_pred HhcCCCCCCeeeeecCceEEEEEEcC-----CCEEEEEEEEecCCC-cchHHHHHHHHHHHhcCCCcceeEEeeeecccc
Q 039533 624 ATSGFSSANLVGVGSFGSVYKGIIDE-----GRTTIAVKVFNLQHH-GASRSFIAECKALKSIRHRNLVKVLTACLGADY 697 (949)
Q Consensus 624 ~~~~y~~~~~lg~G~~g~Vy~~~~~~-----~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 697 (949)
..++|++.+.||+|+||.||+|..+. .+..||+|.++.... .....+.+|+.++++++||||+++++++...+
T Consensus 4 ~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~- 82 (288)
T cd05061 4 SREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQ- 82 (288)
T ss_pred cHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCC-
Confidence 45789999999999999999997642 356899998764332 22346788999999999999999999875444
Q ss_pred cCCccceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCC
Q 039533 698 RGNDFKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDY 777 (949)
Q Consensus 698 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~ 777 (949)
..++||||+++|+|.+++................++..+..++.|++.||+|||++ +|+||||||+||+++++
T Consensus 83 ----~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dikp~nili~~~ 155 (288)
T cd05061 83 ----PTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHD 155 (288)
T ss_pred ----CcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CCcCCCCChheEEEcCC
Confidence 78999999999999999974322111111234567788999999999999999977 99999999999999999
Q ss_pred CceEEeecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHh-CCCCCccccccCchhhhh
Q 039533 778 MTARVGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVI-GKKPIDIMFEGDINLHNF 856 (949)
Q Consensus 778 ~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~ellt-g~~Pf~~~~~~~~~~~~~ 856 (949)
+.+||+|||+++...............++..|+|||.+.+..++.++|||||||++|||++ |..||......+ ...
T Consensus 156 ~~~~L~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~~~--~~~- 232 (288)
T cd05061 156 FTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQ--VLK- 232 (288)
T ss_pred CcEEECcCCccccccccccccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCHHH--HHH-
Confidence 9999999999986544332222222335678999999998889999999999999999999 788885321110 000
Q ss_pred ccccCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHHh
Q 039533 857 GRKALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHELQSI 931 (949)
Q Consensus 857 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i 931 (949)
.+.+...... ...++..+.+++.+|++.+|++|||+.|+++.+++.
T Consensus 233 ----------~~~~~~~~~~-------------------~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~ 278 (288)
T cd05061 233 ----------FVMDGGYLDQ-------------------PDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDD 278 (288)
T ss_pred ----------HHHcCCCCCC-------------------CCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhh
Confidence 0111100000 012345789999999999999999999999988874
No 116
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=100.00 E-value=7.2e-36 Score=322.76 Aligned_cols=265 Identities=23% Similarity=0.352 Sum_probs=203.7
Q ss_pred hcCCCCCCeeeeecCceEEEEEEcCC-----CEEEEEEEEecCCC-cchHHHHHHHHHHHhcCCCcceeEEeeeeccccc
Q 039533 625 TSGFSSANLVGVGSFGSVYKGIIDEG-----RTTIAVKVFNLQHH-GASRSFIAECKALKSIRHRNLVKVLTACLGADYR 698 (949)
Q Consensus 625 ~~~y~~~~~lg~G~~g~Vy~~~~~~~-----~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 698 (949)
.++|++.+.||+|+||.||+|.+... +..||+|.+..... .....+.+|+.++++++||||+++++++....
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~-- 82 (277)
T cd05032 5 REKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVSTGQ-- 82 (277)
T ss_pred hHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCCC--
Confidence 35788999999999999999998643 37899999864432 33457889999999999999999999976543
Q ss_pred CCccceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCC
Q 039533 699 GNDFKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYM 778 (949)
Q Consensus 699 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~ 778 (949)
..++||||+++++|.+++...............+++..++.++.|++.||.|||+. +|+||||||+||+++.++
T Consensus 83 ---~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~di~p~nill~~~~ 156 (277)
T cd05032 83 ---PTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAK---KFVHRDLAARNCMVAEDL 156 (277)
T ss_pred ---CcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccChheEEEcCCC
Confidence 78999999999999999974332211111234578999999999999999999976 999999999999999999
Q ss_pred ceEEeecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHh-CCCCCccccccCchhhhhc
Q 039533 779 TARVGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVI-GKKPIDIMFEGDINLHNFG 857 (949)
Q Consensus 779 ~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~ellt-g~~Pf~~~~~~~~~~~~~~ 857 (949)
.+||+|||+++...............++..|+|||...+..++.++|||||||++||+++ |+.||...... ......
T Consensus 157 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~--~~~~~~ 234 (277)
T cd05032 157 TVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNE--EVLKFV 234 (277)
T ss_pred CEEECCcccchhhccCcccccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCHH--HHHHHH
Confidence 999999999986654432222223346789999999988889999999999999999998 99998532111 111100
Q ss_pred cccCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHH
Q 039533 858 RKALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHELQ 929 (949)
Q Consensus 858 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~ 929 (949)
.+......+ ..++..+.+++.+|++.+|++|||+.|+++.|+
T Consensus 235 -----------~~~~~~~~~-------------------~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~ 276 (277)
T cd05032 235 -----------IDGGHLDLP-------------------ENCPDKLLELMRMCWQYNPKMRPTFLEIVSSLK 276 (277)
T ss_pred -----------hcCCCCCCC-------------------CCCCHHHHHHHHHHcCCChhhCCCHHHHHHHhc
Confidence 000000000 123557889999999999999999999999886
No 117
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=100.00 E-value=7.3e-36 Score=325.53 Aligned_cols=270 Identities=21% Similarity=0.351 Sum_probs=206.5
Q ss_pred HHhcCCCCCCeeeeecCceEEEEEEcC-----CCEEEEEEEEecCCC-cchHHHHHHHHHHHhc-CCCcceeEEeeeecc
Q 039533 623 NATSGFSSANLVGVGSFGSVYKGIIDE-----GRTTIAVKVFNLQHH-GASRSFIAECKALKSI-RHRNLVKVLTACLGA 695 (949)
Q Consensus 623 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~-----~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~ 695 (949)
...++|++.+.||+|+||.||+|.... ....+|+|++..... ....++.+|+.+++++ +|+||+++++++...
T Consensus 9 ~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~ 88 (293)
T cd05053 9 LPRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQE 88 (293)
T ss_pred cCHhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcCC
Confidence 344678899999999999999999863 337899999875332 2335688999999999 899999999997654
Q ss_pred cccCCccceeEeeeccCCChhhhcCCCCCCCc------cccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCC
Q 039533 696 DYRGNDFKASVYEFMHYGSLEEWLHPFTGEDE------IDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKP 769 (949)
Q Consensus 696 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~------~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp 769 (949)
+ ..+++|||+++|+|.++++....... .......+++..++.++.|++.||+|||+. +|+||||||
T Consensus 89 ~-----~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivH~dlkp 160 (293)
T cd05053 89 G-----PLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASK---KCIHRDLAA 160 (293)
T ss_pred C-----CeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHC---Cccccccce
Confidence 4 78999999999999999964321100 112345689999999999999999999977 999999999
Q ss_pred CCeeecCCCceEEeecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHh-CCCCCccccc
Q 039533 770 SNVLLDDYMTARVGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVI-GKKPIDIMFE 848 (949)
Q Consensus 770 ~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~ellt-g~~Pf~~~~~ 848 (949)
+||++++++.+||+|||.++.+.............++..|+|||++.+..++.++|||||||++||+++ |..||.....
T Consensus 161 ~Nil~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~ 240 (293)
T cd05053 161 RNVLVTEDHVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPV 240 (293)
T ss_pred eeEEEcCCCeEEeCccccccccccccceeccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCCCH
Confidence 999999999999999999987654332222222335678999999988889999999999999999998 9999853211
Q ss_pred cCchhhhhccccCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHH
Q 039533 849 GDINLHNFGRKALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHEL 928 (949)
Q Consensus 849 ~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L 928 (949)
.+ ..+.+...... .....++..+.+++.+|+..+|++||||.|+++.|
T Consensus 241 ~~--------------~~~~~~~~~~~------------------~~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~l 288 (293)
T cd05053 241 EE--------------LFKLLKEGYRM------------------EKPQNCTQELYHLMRDCWHEVPSQRPTFKQLVEDL 288 (293)
T ss_pred HH--------------HHHHHHcCCcC------------------CCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHH
Confidence 10 00111100000 00112345688999999999999999999999999
Q ss_pred HHhH
Q 039533 929 QSIK 932 (949)
Q Consensus 929 ~~i~ 932 (949)
+++.
T Consensus 289 ~~~~ 292 (293)
T cd05053 289 DRML 292 (293)
T ss_pred HHhh
Confidence 9874
No 118
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=1e-35 Score=322.50 Aligned_cols=265 Identities=22% Similarity=0.356 Sum_probs=201.5
Q ss_pred cCCCCCCeeeeecCceEEEEEEc----CCCEEEEEEEEecCCC-cchHHHHHHHHHHHhcCCCcceeEEeeeecccccCC
Q 039533 626 SGFSSANLVGVGSFGSVYKGIID----EGRTTIAVKVFNLQHH-GASRSFIAECKALKSIRHRNLVKVLTACLGADYRGN 700 (949)
Q Consensus 626 ~~y~~~~~lg~G~~g~Vy~~~~~----~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 700 (949)
++|++.+.||+|+||.||+|... .++..||+|.++.... .....+.+|++++++++||||+++++++....
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~---- 80 (283)
T cd05090 5 SAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQ---- 80 (283)
T ss_pred hhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCC----
Confidence 46788899999999999999852 3567899999874332 23357889999999999999999999975444
Q ss_pred ccceeEeeeccCCChhhhcCCCCCCC-------ccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCee
Q 039533 701 DFKASVYEFMHYGSLEEWLHPFTGED-------EIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVL 773 (949)
Q Consensus 701 ~~~~lv~e~~~~gsL~~~l~~~~~~~-------~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIl 773 (949)
..++||||+++++|.+++....... ........+++.++..++.|++.||+|||++ +++||||||+||+
T Consensus 81 -~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlkp~nil 156 (283)
T cd05090 81 -PVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSH---FFVHKDLAARNIL 156 (283)
T ss_pred -ceEEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhc---CeehhccccceEE
Confidence 7899999999999999985221100 0011134588999999999999999999977 8999999999999
Q ss_pred ecCCCceEEeecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHh-CCCCCccccccCch
Q 039533 774 LDDYMTARVGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVI-GKKPIDIMFEGDIN 852 (949)
Q Consensus 774 l~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~ellt-g~~Pf~~~~~~~~~ 852 (949)
+++++.+||+|||+++...............++..|+|||+..+..++.++|||||||++|||++ |..||...... .
T Consensus 157 i~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~~--~ 234 (283)
T cd05090 157 IGEQLHVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSNQ--E 234 (283)
T ss_pred EcCCCcEEeccccccccccCCcceecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHH--H
Confidence 99999999999999987644332222223346778999999988889999999999999999998 99998532111 1
Q ss_pred hhhhccccCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHH
Q 039533 853 LHNFGRKALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHELQS 930 (949)
Q Consensus 853 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~ 930 (949)
. .+.++...... ....++..+.+++.+|++.||++||++.+|.+.|..
T Consensus 235 ~------------~~~~~~~~~~~------------------~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05090 235 V------------IEMVRKRQLLP------------------CSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTRLRS 282 (283)
T ss_pred H------------HHHHHcCCcCC------------------CCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHhhc
Confidence 1 11111100000 001234567889999999999999999999998864
No 119
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=100.00 E-value=3.2e-36 Score=339.95 Aligned_cols=202 Identities=23% Similarity=0.291 Sum_probs=171.5
Q ss_pred cCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCC---CcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCcc
Q 039533 626 SGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQH---HGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDF 702 (949)
Q Consensus 626 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 702 (949)
++|++.+.||+|+||.||+|++..+++.||||++.... ....+.+.+|++++++++||||+++++++.+.+ .
T Consensus 1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~-----~ 75 (377)
T cd05629 1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQ-----Y 75 (377)
T ss_pred CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-----e
Confidence 47899999999999999999999899999999986432 223456888999999999999999999976544 8
Q ss_pred ceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEE
Q 039533 703 KASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARV 782 (949)
Q Consensus 703 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl 782 (949)
.++||||+++|+|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||
T Consensus 76 ~~lv~E~~~gg~L~~~l~~----------~~~~~~~~~~~~~~ql~~aL~~LH~~---givHrDlkp~NIll~~~~~~kl 142 (377)
T cd05629 76 LYLIMEFLPGGDLMTMLIK----------YDTFSEDVTRFYMAECVLAIEAVHKL---GFIHRDIKPDNILIDRGGHIKL 142 (377)
T ss_pred eEEEEeCCCCCcHHHHHHh----------cCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEECCCCCEEE
Confidence 9999999999999999862 34578889999999999999999977 9999999999999999999999
Q ss_pred eecccceecCCCCC------------cc---------------------------------ccccccCccCccCccccCC
Q 039533 783 GDFGLARILSPDHT------------QT---------------------------------SSFSVKGSLGYIAPEYGVG 817 (949)
Q Consensus 783 ~DfG~a~~~~~~~~------------~~---------------------------------~~~~~~gt~~y~aPE~~~~ 817 (949)
+|||+++.+..... .. ......||+.|+|||++.+
T Consensus 143 ~DfGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~ 222 (377)
T cd05629 143 SDFGLSTGFHKQHDSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQ 222 (377)
T ss_pred eecccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHcc
Confidence 99999964321100 00 0012459999999999999
Q ss_pred CccCCccchHHHHHHHHHHHhCCCCCcc
Q 039533 818 CEVSTNGDVYSYGILLLELVIGKKPIDI 845 (949)
Q Consensus 818 ~~~~~~sDiwSlGvvl~elltg~~Pf~~ 845 (949)
..++.++|||||||++|||++|+.||..
T Consensus 223 ~~~~~~~DiwSlGvil~elltG~~Pf~~ 250 (377)
T cd05629 223 QGYGQECDWWSLGAIMFECLIGWPPFCS 250 (377)
T ss_pred CCCCCceeeEecchhhhhhhcCCCCCCC
Confidence 8999999999999999999999999963
No 120
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=100.00 E-value=5.6e-36 Score=329.84 Aligned_cols=237 Identities=26% Similarity=0.296 Sum_probs=187.5
Q ss_pred CeeeeecCceEEEEEEcCCCEEEEEEEEecC---CCcchHHHHHHHHHHHhc-CCCcceeEEeeeecccccCCccceeEe
Q 039533 632 NLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQ---HHGASRSFIAECKALKSI-RHRNLVKVLTACLGADYRGNDFKASVY 707 (949)
Q Consensus 632 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~~lv~ 707 (949)
+.||+|+||.||+|++..+++.||||+++.. .....+.+..|..++... +||||+++++++...+ ..++||
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~-----~~~iv~ 75 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPD-----RLFFVM 75 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCC-----EEEEEE
Confidence 4799999999999999988999999998743 223345677888888877 6999999999875544 789999
Q ss_pred eeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEeeccc
Q 039533 708 EFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVGDFGL 787 (949)
Q Consensus 708 e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~DfG~ 787 (949)
||+++|+|.+++. ....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 76 Ey~~~g~L~~~i~----------~~~~l~~~~~~~~~~ql~~~L~~lH~~---~ivH~dlkp~NIli~~~~~~kL~DfG~ 142 (320)
T cd05590 76 EFVNGGDLMFHIQ----------KSRRFDEARARFYAAEITSALMFLHDK---GIIYRDLKLDNVLLDHEGHCKLADFGM 142 (320)
T ss_pred cCCCCchHHHHHH----------HcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHeEECCCCcEEEeeCCC
Confidence 9999999999886 234588999999999999999999977 999999999999999999999999999
Q ss_pred ceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhccccCCCchhh
Q 039533 788 ARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKALPDDVMD 867 (949)
Q Consensus 788 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~ 867 (949)
++......... ....||+.|+|||++.+..++.++|||||||++|||++|+.||....... ... .
T Consensus 143 ~~~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~--~~~-----------~ 207 (320)
T cd05590 143 CKEGIFNGKTT--STFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENEDD--LFE-----------A 207 (320)
T ss_pred CeecCcCCCcc--cccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHH--HHH-----------H
Confidence 87643222211 23458999999999998899999999999999999999999996432110 000 0
Q ss_pred hcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCH
Q 039533 868 IVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNM 921 (949)
Q Consensus 868 ~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~ 921 (949)
+..... ..+ ...+..+.+++.+|++.||++||++
T Consensus 208 i~~~~~-~~~-------------------~~~~~~~~~li~~~L~~dP~~R~~~ 241 (320)
T cd05590 208 ILNDEV-VYP-------------------TWLSQDAVDILKAFMTKNPTMRLGS 241 (320)
T ss_pred HhcCCC-CCC-------------------CCCCHHHHHHHHHHcccCHHHCCCC
Confidence 000000 000 0123457889999999999999998
No 121
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=100.00 E-value=9.9e-36 Score=321.98 Aligned_cols=264 Identities=24% Similarity=0.366 Sum_probs=203.5
Q ss_pred cCCCCCCeeeeecCceEEEEEEc-----CCCEEEEEEEEecCCCcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCC
Q 039533 626 SGFSSANLVGVGSFGSVYKGIID-----EGRTTIAVKVFNLQHHGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGN 700 (949)
Q Consensus 626 ~~y~~~~~lg~G~~g~Vy~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 700 (949)
.+|+..++||+|+||.||+|... .++..+|+|.+..........+.+|++++++++|+||+++++++...+
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~---- 80 (280)
T cd05092 5 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRFYGVCTEGR---- 80 (280)
T ss_pred HhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCCCCCceEEEEEecCC----
Confidence 46788899999999999999743 346789999987665555678999999999999999999999876544
Q ss_pred ccceeEeeeccCCChhhhcCCCCCCC-----ccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeec
Q 039533 701 DFKASVYEFMHYGSLEEWLHPFTGED-----EIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLD 775 (949)
Q Consensus 701 ~~~~lv~e~~~~gsL~~~l~~~~~~~-----~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~ 775 (949)
..++||||+++++|.+++....... ........+++..++.++.|++.|++|||+. +++||||||+||+++
T Consensus 81 -~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---~i~H~dlkp~nil~~ 156 (280)
T cd05092 81 -PLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASL---HFVHRDLATRNCLVG 156 (280)
T ss_pred -ceEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHC---CeecccccHhhEEEc
Confidence 6899999999999999997432110 0111224589999999999999999999977 999999999999999
Q ss_pred CCCceEEeecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHh-CCCCCccccccCchhh
Q 039533 776 DYMTARVGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVI-GKKPIDIMFEGDINLH 854 (949)
Q Consensus 776 ~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~ellt-g~~Pf~~~~~~~~~~~ 854 (949)
+++.+||+|||+++...............++..|+|||+..+..++.++|||||||++|||++ |++||......+ ..
T Consensus 157 ~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~--~~ 234 (280)
T cd05092 157 QGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNTE--AI 234 (280)
T ss_pred CCCCEEECCCCceeEcCCCceeecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCHHH--HH
Confidence 999999999999986644332222222335788999999998899999999999999999998 999985332111 00
Q ss_pred hhccccCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHH
Q 039533 855 NFGRKALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHELQ 929 (949)
Q Consensus 855 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~ 929 (949)
+........ .....++..+.+++.+||+.||++||++.||.+.|+
T Consensus 235 ------------~~~~~~~~~------------------~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~~l~ 279 (280)
T cd05092 235 ------------ECITQGREL------------------ERPRTCPPEVYAIMQGCWQREPQQRMVIKDIHSRLQ 279 (280)
T ss_pred ------------HHHHcCccC------------------CCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHh
Confidence 000000000 000123456889999999999999999999999886
No 122
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=100.00 E-value=1.8e-35 Score=316.66 Aligned_cols=255 Identities=30% Similarity=0.478 Sum_probs=201.2
Q ss_pred hcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCCcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCccce
Q 039533 625 TSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFKA 704 (949)
Q Consensus 625 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 704 (949)
.++|++.+.||+|++|.||+|.+. +++.||+|.++... ...+.+.+|+.++++++||||+++++++.... ..+
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~-~~~~v~iK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-----~~~ 77 (261)
T cd05068 5 RTSIQLLRKLGAGQFGEVWEGLWN-NTTPVAVKTLKPGT-MDPKDFLAEAQIMKKLRHPKLIQLYAVCTLEE-----PIY 77 (261)
T ss_pred hhheeeEEEecccCCccEEEEEec-CCeEEEEEeeCCCc-ccHHHHHHHHHHHHHCCCCCccceeEEEecCC-----Cee
Confidence 456889999999999999999986 46789999986543 23567899999999999999999999875443 789
Q ss_pred eEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEee
Q 039533 705 SVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVGD 784 (949)
Q Consensus 705 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~D 784 (949)
+||||+++++|.+++... ....+++..+..++.|++.|+.|||+. +|+||||||+||++++++.+||+|
T Consensus 78 lv~e~~~~~~L~~~~~~~--------~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~d 146 (261)
T cd05068 78 IVTELMKYGSLLEYLQGG--------AGRALKLPQLIDMAAQVASGMAYLEAQ---NYIHRDLAARNVLVGENNICKVAD 146 (261)
T ss_pred eeeecccCCcHHHHHhcc--------CCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCCcceEEEcCCCCEEECC
Confidence 999999999999999631 134589999999999999999999977 899999999999999999999999
Q ss_pred cccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHh-CCCCCccccccCchhhhhccccCCC
Q 039533 785 FGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVI-GKKPIDIMFEGDINLHNFGRKALPD 863 (949)
Q Consensus 785 fG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~ 863 (949)
||.++......... ......+..|+|||+..+..++.++||||||+++|||++ |+.||....... .
T Consensus 147 fg~~~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~--~---------- 213 (261)
T cd05068 147 FGLARVIKEDIYEA-REGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNAE--V---------- 213 (261)
T ss_pred cceEEEccCCcccc-cCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHHH--H----------
Confidence 99998775332211 111223457999999998899999999999999999999 999986331110 0
Q ss_pred chhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHH
Q 039533 864 DVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHELQS 930 (949)
Q Consensus 864 ~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~ 930 (949)
...++..... +.....+..+.+++.+|++.+|++||++.++.+.|++
T Consensus 214 --~~~~~~~~~~------------------~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~~l~~ 260 (261)
T cd05068 214 --LQQVDQGYRM------------------PCPPGCPKELYDIMLDCWKEDPDDRPTFETLQWKLED 260 (261)
T ss_pred --HHHHHcCCCC------------------CCCCcCCHHHHHHHHHHhhcCcccCCCHHHHHHHHhc
Confidence 0001100000 0001234568899999999999999999999999986
No 123
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=100.00 E-value=8.3e-36 Score=327.85 Aligned_cols=241 Identities=22% Similarity=0.275 Sum_probs=187.0
Q ss_pred CeeeeecCceEEEEEEcCCCEEEEEEEEecCC---CcchHHHHHHHHHHHhc-CCCcceeEEeeeecccccCCccceeEe
Q 039533 632 NLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQH---HGASRSFIAECKALKSI-RHRNLVKVLTACLGADYRGNDFKASVY 707 (949)
Q Consensus 632 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~~lv~ 707 (949)
+.||+|+||.||+|++..+++.||+|+++... ....+....|..++... +||||+++++++...+ ..++||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~-----~~~lv~ 75 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKE-----HLFFVM 75 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCC-----EEEEEE
Confidence 47999999999999999889999999997432 22334556677777654 8999999998865443 789999
Q ss_pred eeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEeeccc
Q 039533 708 EFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVGDFGL 787 (949)
Q Consensus 708 e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~DfG~ 787 (949)
||+++|+|.+++. ....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 76 e~~~gg~L~~~~~----------~~~~~~~~~~~~~~~qi~~al~~LH~~---~ivH~dlkp~Nill~~~~~~kL~Dfg~ 142 (316)
T cd05592 76 EYLNGGDLMFHIQ----------SSGRFDEARARFYAAEIICGLQFLHKK---GIIYRDLKLDNVLLDKDGHIKIADFGM 142 (316)
T ss_pred cCCCCCcHHHHHH----------HcCCCCHHHHHHHHHHHHHHHHHHHHC---CEEeCCCCHHHeEECCCCCEEEccCcC
Confidence 9999999999986 234588899999999999999999977 999999999999999999999999999
Q ss_pred ceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhccccCCCchhh
Q 039533 788 ARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKALPDDVMD 867 (949)
Q Consensus 788 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~ 867 (949)
++........ .....||+.|+|||++.+..++.++|||||||++|||++|+.||...... .... .
T Consensus 143 a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~--~~~~-----------~ 207 (316)
T cd05592 143 CKENMNGEGK--ASTFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDED--ELFD-----------S 207 (316)
T ss_pred CeECCCCCCc--cccccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCHH--HHHH-----------H
Confidence 9865332221 12345899999999999989999999999999999999999999633211 0000 0
Q ss_pred hcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHH-HHH
Q 039533 868 IVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMT-NVV 925 (949)
Q Consensus 868 ~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~-ev~ 925 (949)
+.. .....+ ...+..+.+++.+|++.||++||++. ++.
T Consensus 208 i~~-~~~~~~-------------------~~~~~~~~~ll~~~l~~~P~~R~~~~~~l~ 246 (316)
T cd05592 208 ILN-DRPHFP-------------------RWISKEAKDCLSKLFERDPTKRLGVDGDIR 246 (316)
T ss_pred HHc-CCCCCC-------------------CCCCHHHHHHHHHHccCCHHHcCCChHHHH
Confidence 000 000000 01234567899999999999999876 443
No 124
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=1.4e-35 Score=323.24 Aligned_cols=250 Identities=20% Similarity=0.288 Sum_probs=201.5
Q ss_pred cCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCCcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCcccee
Q 039533 626 SGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFKAS 705 (949)
Q Consensus 626 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 705 (949)
.+|++.+.||+|++|.||+|.+..+++.||+|.+........+.+.+|+.++++++|+||+++++++.... ..++
T Consensus 20 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~-----~~~l 94 (296)
T cd06654 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGD-----ELWV 94 (296)
T ss_pred cceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCCCCEeeEEEEEEeCC-----EEEE
Confidence 57899999999999999999998889999999998666555678899999999999999999999876544 7899
Q ss_pred EeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEeec
Q 039533 706 VYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVGDF 785 (949)
Q Consensus 706 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~Df 785 (949)
||||+++++|.+++. ...+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+||
T Consensus 95 v~e~~~~~~L~~~~~-----------~~~~~~~~~~~i~~ql~~aL~~LH~~---gi~H~dLkp~Nill~~~~~~kl~df 160 (296)
T cd06654 95 VMEYLAGGSLTDVVT-----------ETCMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDF 160 (296)
T ss_pred eecccCCCCHHHHHH-----------hcCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCEEECcc
Confidence 999999999999985 13478889999999999999999977 8999999999999999999999999
Q ss_pred ccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhccccCCCch
Q 039533 786 GLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKALPDDV 865 (949)
Q Consensus 786 G~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~ 865 (949)
|.+.......... ....|++.|+|||.+.+..++.++|||||||++|||++|+.||.......... ....
T Consensus 161 g~~~~~~~~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~~~~-~~~~------- 230 (296)
T cd06654 161 GFCAQITPEQSKR--STMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALY-LIAT------- 230 (296)
T ss_pred ccchhcccccccc--CcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHhHH-HHhc-------
Confidence 9987654332211 13458899999999988889999999999999999999999996432111000 0000
Q ss_pred hhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 039533 866 MDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVH 926 (949)
Q Consensus 866 ~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 926 (949)
... +.. ......+..+.+++.+|+..+|++||++.|+++
T Consensus 231 ----~~~--~~~----------------~~~~~~~~~l~~li~~~l~~~p~~Rpt~~eil~ 269 (296)
T cd06654 231 ----NGT--PEL----------------QNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQ 269 (296)
T ss_pred ----CCC--CCC----------------CCccccCHHHHHHHHHHCcCCcccCcCHHHHhh
Confidence 000 000 000123456788999999999999999999987
No 125
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=100.00 E-value=1.6e-35 Score=323.16 Aligned_cols=270 Identities=22% Similarity=0.340 Sum_probs=205.0
Q ss_pred cCCCCCCeeeeecCceEEEEEEcCCCE--EEEEEEEecCC-CcchHHHHHHHHHHHhc-CCCcceeEEeeeecccccCCc
Q 039533 626 SGFSSANLVGVGSFGSVYKGIIDEGRT--TIAVKVFNLQH-HGASRSFIAECKALKSI-RHRNLVKVLTACLGADYRGND 701 (949)
Q Consensus 626 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~--~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~ 701 (949)
++|++.+.||+|+||.||+|....++. .+++|.++... ....+.+.+|++++.++ +||||+++++++...+
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~----- 76 (297)
T cd05089 2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACENRG----- 76 (297)
T ss_pred ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCC-----
Confidence 579999999999999999999876654 47888876322 23346788999999999 7999999999875544
Q ss_pred cceeEeeeccCCChhhhcCCCCCCCc------cccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeec
Q 039533 702 FKASVYEFMHYGSLEEWLHPFTGEDE------IDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLD 775 (949)
Q Consensus 702 ~~~lv~e~~~~gsL~~~l~~~~~~~~------~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~ 775 (949)
..++||||+++++|.+++........ .......+++..++.++.|++.|++|||++ +|+||||||+||+++
T Consensus 77 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~---~ivH~dlkp~Nill~ 153 (297)
T cd05089 77 YLYIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEK---QFIHRDLAARNVLVG 153 (297)
T ss_pred cceEEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCcCCcceEEEC
Confidence 78999999999999999964321110 011224588999999999999999999977 999999999999999
Q ss_pred CCCceEEeecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHh-CCCCCccccccCchhh
Q 039533 776 DYMTARVGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVI-GKKPIDIMFEGDINLH 854 (949)
Q Consensus 776 ~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~ellt-g~~Pf~~~~~~~~~~~ 854 (949)
+++.+||+|||++......... .....+..|+|||+..+..++.++|||||||++|||++ |..||.......
T Consensus 154 ~~~~~kl~dfg~~~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~~---- 226 (297)
T cd05089 154 ENLASKIADFGLSRGEEVYVKK---TMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCAE---- 226 (297)
T ss_pred CCCeEEECCcCCCccccceecc---CCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHH----
Confidence 9999999999998643211111 11123567999999988889999999999999999997 999985332110
Q ss_pred hhccccCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHHhHHh
Q 039533 855 NFGRKALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHELQSIKNI 934 (949)
Q Consensus 855 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~~~ 934 (949)
. .+.+....... ....++..+.+++.+|++.+|.+||+++++++.|+.+.++
T Consensus 227 -~---------~~~~~~~~~~~------------------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~~~~ 278 (297)
T cd05089 227 -L---------YEKLPQGYRME------------------KPRNCDDEVYELMRQCWRDRPYERPPFAQISVQLSRMLEA 278 (297)
T ss_pred -H---------HHHHhcCCCCC------------------CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence 0 00000000000 0012345678999999999999999999999999999887
Q ss_pred hccC
Q 039533 935 LLGV 938 (949)
Q Consensus 935 ~~~~ 938 (949)
....
T Consensus 279 ~~~~ 282 (297)
T cd05089 279 RKAY 282 (297)
T ss_pred hccc
Confidence 6554
No 126
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=100.00 E-value=8.1e-36 Score=329.89 Aligned_cols=194 Identities=26% Similarity=0.329 Sum_probs=166.5
Q ss_pred CeeeeecCceEEEEEEcCCCEEEEEEEEecCC---CcchHHHHHHHHHHHhc-CCCcceeEEeeeecccccCCccceeEe
Q 039533 632 NLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQH---HGASRSFIAECKALKSI-RHRNLVKVLTACLGADYRGNDFKASVY 707 (949)
Q Consensus 632 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~~lv~ 707 (949)
++||+|+||.||+|++..+++.||+|+++... ....+.+..|..+++++ +||||+++++++.... ..++||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~-----~~~lv~ 75 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTES-----RLFFVI 75 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCC-----EEEEEE
Confidence 47999999999999999899999999997532 22345678899999998 7999999999876544 789999
Q ss_pred eeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEeeccc
Q 039533 708 EFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVGDFGL 787 (949)
Q Consensus 708 e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~DfG~ 787 (949)
||+++|+|.+++. ....+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+
T Consensus 76 e~~~~g~L~~~~~----------~~~~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nili~~~~~~kL~Dfg~ 142 (329)
T cd05588 76 EFVSGGDLMFHMQ----------RQRKLPEEHARFYSAEISLALNFLHER---GIIYRDLKLDNVLLDAEGHIKLTDYGM 142 (329)
T ss_pred eCCCCCCHHHHHH----------HcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEECcCcc
Confidence 9999999998885 234689999999999999999999977 999999999999999999999999999
Q ss_pred ceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCcc
Q 039533 788 ARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDI 845 (949)
Q Consensus 788 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~ 845 (949)
++........ .....||..|+|||++.+..++.++|||||||++|||++|+.||+.
T Consensus 143 ~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~ 198 (329)
T cd05588 143 CKEGIRPGDT--TSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDI 198 (329)
T ss_pred ccccccCCCc--cccccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCccc
Confidence 8753222111 1234589999999999998999999999999999999999999963
No 127
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=100.00 E-value=4.8e-36 Score=336.01 Aligned_cols=206 Identities=21% Similarity=0.295 Sum_probs=174.1
Q ss_pred HHHHHhcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCC---CcchHHHHHHHHHHHhcCCCcceeEEeeeeccc
Q 039533 620 DLYNATSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQH---HGASRSFIAECKALKSIRHRNLVKVLTACLGAD 696 (949)
Q Consensus 620 ~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 696 (949)
++....++|++.+.||+|+||.||+|++..+++.||+|++.... ....+.+.+|+.+++.++||||+++++++....
T Consensus 37 ~~~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~ 116 (370)
T cd05621 37 KLQMKAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDK 116 (370)
T ss_pred hcCCCHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCC
Confidence 33445678999999999999999999999889999999986422 223456789999999999999999999875443
Q ss_pred ccCCccceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecC
Q 039533 697 YRGNDFKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDD 776 (949)
Q Consensus 697 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~ 776 (949)
..++||||+++|+|.+++.. ..+++..+..++.|++.||+|||+. +|+||||||+||++++
T Consensus 117 -----~~~lv~Ey~~gg~L~~~l~~-----------~~~~~~~~~~~~~qil~aL~~LH~~---~IvHrDLKp~NILl~~ 177 (370)
T cd05621 117 -----YLYMVMEYMPGGDLVNLMSN-----------YDVPEKWAKFYTAEVVLALDAIHSM---GLIHRDVKPDNMLLDK 177 (370)
T ss_pred -----EEEEEEcCCCCCcHHHHHHh-----------cCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEECC
Confidence 79999999999999999862 2478889999999999999999977 9999999999999999
Q ss_pred CCceEEeecccceecCCCCCccccccccCccCccCccccCCC----ccCCccchHHHHHHHHHHHhCCCCCcc
Q 039533 777 YMTARVGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGC----EVSTNGDVYSYGILLLELVIGKKPIDI 845 (949)
Q Consensus 777 ~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----~~~~~sDiwSlGvvl~elltg~~Pf~~ 845 (949)
++.+||+|||+|+........ ......||+.|+|||++.+. .++.++||||+||++|||++|+.||..
T Consensus 178 ~~~~kL~DFG~a~~~~~~~~~-~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~ 249 (370)
T cd05621 178 HGHLKLADFGTCMKMDETGMV-RCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYA 249 (370)
T ss_pred CCCEEEEecccceecccCCce-ecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCC
Confidence 999999999999876543221 11245699999999998754 378899999999999999999999963
No 128
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=100.00 E-value=1.4e-35 Score=322.34 Aligned_cols=273 Identities=24% Similarity=0.309 Sum_probs=198.7
Q ss_pred CCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCC--cchHHHHHHHHHHHhc---CCCcceeEEeeeecccccCCc
Q 039533 627 GFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHH--GASRSFIAECKALKSI---RHRNLVKVLTACLGADYRGND 701 (949)
Q Consensus 627 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l---~h~niv~~~~~~~~~~~~~~~ 701 (949)
+|++.+.||+|+||.||+|++..+++.||+|+++.... .....+.+|+++++++ +||||+++++++.........
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~ 80 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRET 80 (288)
T ss_pred CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCc
Confidence 58889999999999999999998999999999875322 2234566787777766 699999999998765444455
Q ss_pred cceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceE
Q 039533 702 FKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTAR 781 (949)
Q Consensus 702 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~k 781 (949)
..++||||+.+ +|.+++... ....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+|
T Consensus 81 ~~~lv~e~~~~-~l~~~~~~~--------~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dikp~Nili~~~~~~k 148 (288)
T cd07863 81 KVTLVFEHVDQ-DLRTYLDKV--------PPPGLPAETIKDLMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGQVK 148 (288)
T ss_pred eEEEEEccccc-CHHHHHHhc--------CCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEE
Confidence 78999999974 888888621 123489999999999999999999977 899999999999999999999
Q ss_pred EeecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhcc---
Q 039533 782 VGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGR--- 858 (949)
Q Consensus 782 l~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~--- 858 (949)
|+|||+++........ ....||..|+|||++.+..++.++||||+||++|||++|++||......+ .+.....
T Consensus 149 l~dfg~~~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~-~~~~~~~~~~ 224 (288)
T cd07863 149 LADFGLARIYSCQMAL---TPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEAD-QLGKIFDLIG 224 (288)
T ss_pred ECccCccccccCcccC---CCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHH-HHHHHHHHhC
Confidence 9999999876533221 13458999999999998889999999999999999999999985432111 0100000
Q ss_pred ccCCCchhhhc---ccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 039533 859 KALPDDVMDIV---DSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVH 926 (949)
Q Consensus 859 ~~~~~~~~~~~---d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 926 (949)
........... .....+.. .........+....+.+++.+|++.||++|||+.|++.
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~ 284 (288)
T cd07863 225 LPPEDDWPRDVTLPRGAFSPRG-----------PRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQ 284 (288)
T ss_pred CCChhhCcccccccccccCCCC-----------CCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 00000000000 00000000 00000011134556789999999999999999999874
No 129
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=100.00 E-value=8.5e-36 Score=329.00 Aligned_cols=242 Identities=21% Similarity=0.246 Sum_probs=190.0
Q ss_pred CeeeeecCceEEEEEEc---CCCEEEEEEEEecCC----CcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCccce
Q 039533 632 NLVGVGSFGSVYKGIID---EGRTTIAVKVFNLQH----HGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFKA 704 (949)
Q Consensus 632 ~~lg~G~~g~Vy~~~~~---~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 704 (949)
+.||+|+||.||+|+.. .+++.||+|+++... ......+.+|+.++++++||||+++++++...+ ..+
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~-----~~~ 76 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGG-----KLY 76 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCC-----eEE
Confidence 68999999999999874 367899999997432 223356788999999999999999999875443 789
Q ss_pred eEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEee
Q 039533 705 SVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVGD 784 (949)
Q Consensus 705 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~D 784 (949)
+||||+++++|.+++. ....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|
T Consensus 77 lv~e~~~~~~L~~~~~----------~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~D 143 (323)
T cd05584 77 LILEYLSGGELFMHLE----------REGIFMEDTACFYLSEISLALEHLHQQ---GIIYRDLKPENILLDAQGHVKLTD 143 (323)
T ss_pred EEEeCCCCchHHHHHH----------HcCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEEee
Confidence 9999999999999986 234577888999999999999999977 999999999999999999999999
Q ss_pred cccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhccccCCCc
Q 039533 785 FGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKALPDD 864 (949)
Q Consensus 785 fG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~ 864 (949)
||+++......... ....||+.|+|||++.+..++.++|||||||++|||++|+.||....... .
T Consensus 144 fg~~~~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~~~-----~-------- 208 (323)
T cd05584 144 FGLCKESIHEGTVT--HTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENRKK-----T-------- 208 (323)
T ss_pred CcCCeecccCCCcc--cccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCHHH-----H--------
Confidence 99987543322211 13458999999999998889999999999999999999999996321110 0
Q ss_pred hhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCC-----CHHHHHH
Q 039533 865 VMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRT-----NMTNVVH 926 (949)
Q Consensus 865 ~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----s~~ev~~ 926 (949)
...+...... .+ ......+.+++.+|++.||++|| ++.++++
T Consensus 209 ~~~~~~~~~~-~~-------------------~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~ 255 (323)
T cd05584 209 IDKILKGKLN-LP-------------------PYLTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQS 255 (323)
T ss_pred HHHHHcCCCC-CC-------------------CCCCHHHHHHHHHHcccCHhHcCCCCCCCHHHHhc
Confidence 0011111000 00 02234578999999999999999 7777765
No 130
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-36 Score=328.54 Aligned_cols=245 Identities=23% Similarity=0.316 Sum_probs=198.7
Q ss_pred eeeeecCceEEEEEEcCCCEEEEEEEEecCCCcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCccceeEeeeccC
Q 039533 633 LVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFKASVYEFMHY 712 (949)
Q Consensus 633 ~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~ 712 (949)
+||+|.||+||.|++..+...+|||.+........+-+..|+..-++++|.|||+++|.|.+.+ +.-|.||-++|
T Consensus 582 VLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~senG-----f~kIFMEqVPG 656 (1226)
T KOG4279|consen 582 VLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGSVSENG-----FFKIFMEQVPG 656 (1226)
T ss_pred EeecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhccCCCC-----eEEEEeecCCC
Confidence 7999999999999999999999999998777777778999999999999999999999976555 78899999999
Q ss_pred CChhhhcCCCCCCCccccCCCCC--CHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeec-CCCceEEeecccce
Q 039533 713 GSLEEWLHPFTGEDEIDEAPRNL--NLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLD-DYMTARVGDFGLAR 789 (949)
Q Consensus 713 gsL~~~l~~~~~~~~~~~~~~~l--~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~-~~~~~kl~DfG~a~ 789 (949)
|+|.+.+...- +++ .+.+.--+.+||++||.|||++ .|||||||-+||||+ ..|.+||+|||-++
T Consensus 657 GSLSsLLrskW---------GPlKDNEstm~fYtkQILeGLkYLHen---~IVHRDIKGDNVLvNTySGvlKISDFGTsK 724 (1226)
T KOG4279|consen 657 GSLSSLLRSKW---------GPLKDNESTMNFYTKQILEGLKYLHEN---KIVHRDIKGDNVLVNTYSGVLKISDFGTSK 724 (1226)
T ss_pred CcHHHHHHhcc---------CCCccchhHHHHHHHHHHHHhhhhhhc---ceeeccccCCcEEEeeccceEEecccccch
Confidence 99999997432 333 5667777999999999999988 899999999999995 78999999999998
Q ss_pred ecCCCCCccccccccCccCccCccccCCC--ccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhccccCCCchhh
Q 039533 790 ILSPDHTQTSSFSVKGSLGYIAPEYGVGC--EVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKALPDDVMD 867 (949)
Q Consensus 790 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~ 867 (949)
.+..-...+. .+.||..|||||++..+ .|+.++|||||||++.||.||++||-........+ +.-++.+
T Consensus 725 RLAginP~TE--TFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqAAM-------FkVGmyK 795 (1226)
T KOG4279|consen 725 RLAGINPCTE--TFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQAAM-------FKVGMYK 795 (1226)
T ss_pred hhccCCcccc--ccccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhHhh-------hhhccee
Confidence 8765444332 45699999999998876 48899999999999999999999995332111000 0000000
Q ss_pred hcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 039533 868 IVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVH 926 (949)
Q Consensus 868 ~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 926 (949)
..+ +.+.+...+...++.+|+.+||.+||+|+++++
T Consensus 796 -----vHP------------------~iPeelsaeak~FilrcFepd~~~R~sA~~LL~ 831 (1226)
T KOG4279|consen 796 -----VHP------------------PIPEELSAEAKNFILRCFEPDPCDRPSAKDLLQ 831 (1226)
T ss_pred -----cCC------------------CCcHHHHHHHHHHHHHHcCCCcccCccHHHhcc
Confidence 000 112466777889999999999999999999976
No 131
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=100.00 E-value=3.2e-35 Score=315.80 Aligned_cols=261 Identities=22% Similarity=0.323 Sum_probs=206.9
Q ss_pred cCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCC---CcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCcc
Q 039533 626 SGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQH---HGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDF 702 (949)
Q Consensus 626 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 702 (949)
++|++.+.||+|++|.||+|....+++.||+|.++... ....+.+.+|++++++++|+|++++++++...+ .
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~-----~ 76 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENN-----E 76 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCC-----e
Confidence 57999999999999999999999889999999986432 223467889999999999999999999976544 7
Q ss_pred ceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEE
Q 039533 703 KASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARV 782 (949)
Q Consensus 703 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl 782 (949)
.++||||+++++|.+++.... .....+++.++..++.|++.|++|||+. +|+||||||+||+++.++.++|
T Consensus 77 ~~lv~e~~~~~~L~~~l~~~~------~~~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~nil~~~~~~~~l 147 (267)
T cd08224 77 LNIVLELADAGDLSRMIKHFK------KQKRLIPERTIWKYFVQLCSALEHMHSK---RIMHRDIKPANVFITATGVVKL 147 (267)
T ss_pred EEEEEecCCCCCHHHHHHHhc------ccCCCcCHHHHHHHHHHHHHHHHHHHhC---CEecCCcChhhEEECCCCcEEE
Confidence 899999999999999986321 1234588999999999999999999977 9999999999999999999999
Q ss_pred eecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhccccCC
Q 039533 783 GDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKALP 862 (949)
Q Consensus 783 ~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~ 862 (949)
+|||.+.......... ....++..|+|||...+..++.++|||||||++|||++|+.||...... .....
T Consensus 148 ~d~~~~~~~~~~~~~~--~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~---~~~~~----- 217 (267)
T cd08224 148 GDLGLGRFFSSKTTAA--HSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMN---LYSLC----- 217 (267)
T ss_pred eccceeeeccCCCccc--ceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCCcc---HHHHH-----
Confidence 9999988654332211 1245888999999998888999999999999999999999998532111 10000
Q ss_pred Cchhhhccc-CCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHHhH
Q 039533 863 DDVMDIVDS-SLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHELQSIK 932 (949)
Q Consensus 863 ~~~~~~~d~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~ 932 (949)
+.+.. ...+.+ ....+..+.+++.+|+..+|++|||+.+|++.++++.
T Consensus 218 ----~~~~~~~~~~~~------------------~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~~~~~~~ 266 (267)
T cd08224 218 ----KKIEKCDYPPLP------------------ADHYSEELRDLVSRCINPDPEKRPDISYVLQVAKEMH 266 (267)
T ss_pred ----hhhhcCCCCCCC------------------hhhcCHHHHHHHHHHcCCCcccCCCHHHHHHHHHHhc
Confidence 00000 000000 0133456889999999999999999999999999874
No 132
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=100.00 E-value=7.4e-36 Score=330.02 Aligned_cols=194 Identities=25% Similarity=0.323 Sum_probs=166.0
Q ss_pred CeeeeecCceEEEEEEcCCCEEEEEEEEecCC---CcchHHHHHHHHHHHhc-CCCcceeEEeeeecccccCCccceeEe
Q 039533 632 NLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQH---HGASRSFIAECKALKSI-RHRNLVKVLTACLGADYRGNDFKASVY 707 (949)
Q Consensus 632 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~~lv~ 707 (949)
+.||+|+||.||+|++..+++.||+|+++... ....+.+.+|+.++.++ +||||+++++++...+ ..++||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~-----~~~lv~ 75 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTES-----RLFFVI 75 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCC-----EEEEEE
Confidence 47999999999999999899999999997542 22345677899888877 7999999999876544 789999
Q ss_pred eeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEeeccc
Q 039533 708 EFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVGDFGL 787 (949)
Q Consensus 708 e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~DfG~ 787 (949)
||+++|+|..++. ....+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+
T Consensus 76 E~~~~~~L~~~~~----------~~~~l~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dikp~Nili~~~~~~kL~DfG~ 142 (329)
T cd05618 76 EYVNGGDLMFHMQ----------RQRKLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGM 142 (329)
T ss_pred eCCCCCCHHHHHH----------HcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEECCCCCEEEeeCCc
Confidence 9999999998885 234588999999999999999999977 999999999999999999999999999
Q ss_pred ceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCcc
Q 039533 788 ARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDI 845 (949)
Q Consensus 788 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~ 845 (949)
++........ .....||..|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 143 ~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~ 198 (329)
T cd05618 143 CKEGLRPGDT--TSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDI 198 (329)
T ss_pred cccccCCCCc--cccccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCcc
Confidence 8754322211 1234589999999999999999999999999999999999999963
No 133
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=100.00 E-value=6.4e-36 Score=329.83 Aligned_cols=242 Identities=24% Similarity=0.295 Sum_probs=190.4
Q ss_pred CeeeeecCceEEEEEEcCCCEEEEEEEEecCC---CcchHHHHHHHHHHHhc-CCCcceeEEeeeecccccCCccceeEe
Q 039533 632 NLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQH---HGASRSFIAECKALKSI-RHRNLVKVLTACLGADYRGNDFKASVY 707 (949)
Q Consensus 632 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~~lv~ 707 (949)
++||+|+||.||+|++..+++.||+|+++... ....+.+..|.+++..+ +||||+++++++...+ ..++||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~-----~~~lv~ 75 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKD-----RLFFVM 75 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCC-----eEEEEE
Confidence 46999999999999999889999999997432 23345677889988876 7999999999976544 789999
Q ss_pred eeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEeeccc
Q 039533 708 EFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVGDFGL 787 (949)
Q Consensus 708 e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~DfG~ 787 (949)
||+++|+|..++. ....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 76 E~~~~~~L~~~l~----------~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDikp~Nill~~~~~~kL~Dfg~ 142 (321)
T cd05591 76 EYVNGGDLMFQIQ----------RSRKFDEPRSRFYAAEVTLALMFLHRH---GVIYRDLKLDNILLDAEGHCKLADFGM 142 (321)
T ss_pred eCCCCCcHHHHHH----------HcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEEeeccc
Confidence 9999999999886 234588899999999999999999977 899999999999999999999999999
Q ss_pred ceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhccccCCCchhh
Q 039533 788 ARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKALPDDVMD 867 (949)
Q Consensus 788 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~ 867 (949)
++......... ....||..|+|||++.+..++.++|||||||++|||++|+.||....... .. ..
T Consensus 143 ~~~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~~--~~-----------~~ 207 (321)
T cd05591 143 CKEGILNGVTT--TTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNEDD--LF-----------ES 207 (321)
T ss_pred ceecccCCccc--cccccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCHHH--HH-----------HH
Confidence 97643322211 23458999999999998899999999999999999999999996432111 00 00
Q ss_pred hcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCC-------CHHHHHH
Q 039533 868 IVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRT-------NMTNVVH 926 (949)
Q Consensus 868 ~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-------s~~ev~~ 926 (949)
+....... + ...+..+.+++.+|++.||++|| ++.++++
T Consensus 208 i~~~~~~~-p-------------------~~~~~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~ 253 (321)
T cd05591 208 ILHDDVLY-P-------------------VWLSKEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQ 253 (321)
T ss_pred HHcCCCCC-C-------------------CCCCHHHHHHHHHHhccCHHHcCCCCCCCCCHHHHhc
Confidence 00000000 0 01234578899999999999999 7777764
No 134
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=100.00 E-value=1.2e-38 Score=340.35 Aligned_cols=362 Identities=27% Similarity=0.436 Sum_probs=301.9
Q ss_pred cEEEEEcCCCCCC-ccccCCCCCCCCCceeeccCceeccccCCcccCcccCcEEeeccccccCcCCCCCCCCccceeecC
Q 039533 66 RVTLLDLRSLKLA-GSVSHFIGNLSFLKQLYLQVNSFTHEIPSEIGGLRRLKVLALNNNSICGEIPTNISRCSTLIPIHP 144 (949)
Q Consensus 66 ~v~~l~l~~~~l~-g~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l 144 (949)
-|..+|+++|.++ +..|.....++.++.|.|...++. .+|++++.|.+|++|.+++|++. .+-..++.|+.|+.+.+
T Consensus 8 FVrGvDfsgNDFsg~~FP~~v~qMt~~~WLkLnrt~L~-~vPeEL~~lqkLEHLs~~HN~L~-~vhGELs~Lp~LRsv~~ 85 (1255)
T KOG0444|consen 8 FVRGVDFSGNDFSGDRFPHDVEQMTQMTWLKLNRTKLE-QVPEELSRLQKLEHLSMAHNQLI-SVHGELSDLPRLRSVIV 85 (1255)
T ss_pred eeecccccCCcCCCCcCchhHHHhhheeEEEechhhhh-hChHHHHHHhhhhhhhhhhhhhH-hhhhhhccchhhHHHhh
Confidence 4788999999998 567889999999999999999997 89999999999999999999998 77788899999999999
Q ss_pred CCccccc-cccccccCCCCCcEEECCCCCCCCCCCCCcCCCCCccEEeccccccCCCCCC-cccCCCccccccccCcccc
Q 039533 145 QNNQLVG-KILSRFSSLSKTEILNLGSNHLTGSIPSSLGNLSSIHTISLAYNNLDGTIPN-SFGWFENLVFLSLAANNLS 222 (949)
Q Consensus 145 ~~n~l~~-~~~~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~ 222 (949)
..|++.. -+|..+-.|..|++||||+|+++ ..|..+..-+++-.|+||+|+|. +||. -|-+++.|-+||||+|++.
T Consensus 86 R~N~LKnsGiP~diF~l~dLt~lDLShNqL~-EvP~~LE~AKn~iVLNLS~N~Ie-tIPn~lfinLtDLLfLDLS~NrLe 163 (1255)
T KOG0444|consen 86 RDNNLKNSGIPTDIFRLKDLTILDLSHNQLR-EVPTNLEYAKNSIVLNLSYNNIE-TIPNSLFINLTDLLFLDLSNNRLE 163 (1255)
T ss_pred hccccccCCCCchhcccccceeeecchhhhh-hcchhhhhhcCcEEEEcccCccc-cCCchHHHhhHhHhhhccccchhh
Confidence 9999953 46777788999999999999999 88999999999999999999999 5555 5779999999999999987
Q ss_pred cccccccCCCCChhhhccccccccccCCCCCCCCCCcchhccccccCcccEEEccCCCCC-ccCCchhhcccccccEEEc
Q 039533 223 VVENKLTGEVPSLEKLQRLQHFTITSNSLGSGGNDDLSFLCSLTNATRLTWMHINSNNFG-GLLPGCISNLSKTIKTLFL 301 (949)
Q Consensus 223 ~~~~~l~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~~~~L~~L~L~~N~l~-~~~p~~~~~l~~~L~~L~L 301 (949)
.+| |....|..|++|.|++|.+... .+..+..+++|+.|++++.+-+ .-+|..+..+ .+|..+||
T Consensus 164 ~LP-------PQ~RRL~~LqtL~Ls~NPL~hf------QLrQLPsmtsL~vLhms~TqRTl~N~Ptsld~l-~NL~dvDl 229 (1255)
T KOG0444|consen 164 MLP-------PQIRRLSMLQTLKLSNNPLNHF------QLRQLPSMTSLSVLHMSNTQRTLDNIPTSLDDL-HNLRDVDL 229 (1255)
T ss_pred hcC-------HHHHHHhhhhhhhcCCChhhHH------HHhcCccchhhhhhhcccccchhhcCCCchhhh-hhhhhccc
Confidence 654 5688999999999999988642 2344567788888999887644 4567777776 46888888
Q ss_pred cCccccCCCCCCCCCCCcccEEEeecceecccCCCcccccCCCCEEecCCcccccccCcccccccccceeeccccccccc
Q 039533 302 NNNKIYGSIPAGIGNFVNLQRLDMWNNQLSGTIPPAIGELQNLKILGLNRNKLSGNIPPSIGNLKMLLNLFLNDNFLEVS 381 (949)
Q Consensus 302 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 381 (949)
|.|.+. .+|+.+.++++|+.|+||+|+|+ .+....+...+|++|+||+|+++ .+|++++.+++|+.|++.+|+++..
T Consensus 230 S~N~Lp-~vPecly~l~~LrrLNLS~N~it-eL~~~~~~W~~lEtLNlSrNQLt-~LP~avcKL~kL~kLy~n~NkL~Fe 306 (1255)
T KOG0444|consen 230 SENNLP-IVPECLYKLRNLRRLNLSGNKIT-ELNMTEGEWENLETLNLSRNQLT-VLPDAVCKLTKLTKLYANNNKLTFE 306 (1255)
T ss_pred cccCCC-cchHHHhhhhhhheeccCcCcee-eeeccHHHHhhhhhhccccchhc-cchHHHhhhHHHHHHHhccCccccc
Confidence 888888 78888888888888888888887 55566667778888888888888 7888888888888888888887633
Q ss_pred -CCCCCCCCCCCcEEEeeCccccCCCCCcccCCcccceeeccCCCccCCCCccccccccccceeeeccccc
Q 039533 382 -IPSSLGQCESLIEINLSNNNLSGTIPPQFFSLSSLSISLDWSRNKLTGSLPIEVGKLKILEFLYVYENRL 451 (949)
Q Consensus 382 -~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~l~~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 451 (949)
+|+.++.+.+|+++..++|++. .+|+.++.+..| +.|.|+.|++- .+|+++.-++.|+.|||..|.=
T Consensus 307 GiPSGIGKL~~Levf~aanN~LE-lVPEglcRC~kL-~kL~L~~NrLi-TLPeaIHlL~~l~vLDlreNpn 374 (1255)
T KOG0444|consen 307 GIPSGIGKLIQLEVFHAANNKLE-LVPEGLCRCVKL-QKLKLDHNRLI-TLPEAIHLLPDLKVLDLRENPN 374 (1255)
T ss_pred CCccchhhhhhhHHHHhhccccc-cCchhhhhhHHH-HHhccccccee-echhhhhhcCCcceeeccCCcC
Confidence 6778888888888888888887 778888877777 66777777776 6777777777777777777753
No 135
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=100.00 E-value=4.7e-38 Score=308.89 Aligned_cols=248 Identities=23% Similarity=0.321 Sum_probs=207.4
Q ss_pred CCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCCcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCccceeEe
Q 039533 628 FSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFKASVY 707 (949)
Q Consensus 628 y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~ 707 (949)
|.+..+||+|+||+||+|.++.+|..||||.+... .+.+++..|+.++++.+.|+||++||.+.... ..++||
T Consensus 35 FDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~--sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~s-----DLWIVM 107 (502)
T KOG0574|consen 35 FDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVD--TDLQEIIKEISIMQQCKSKYVVKYYGSYFKHS-----DLWIVM 107 (502)
T ss_pred HHHHHHhcCCcchHHHHHHHhccCcEEEEEecCcc--chHHHHHHHHHHHHHcCCchhhhhhhhhccCC-----ceEeeh
Confidence 55678999999999999999999999999998644 34678999999999999999999999865444 789999
Q ss_pred eeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEeeccc
Q 039533 708 EFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVGDFGL 787 (949)
Q Consensus 708 e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~DfG~ 787 (949)
|||-.|+..+.++ ..++.+++.++..++...++||+|||.- .-+|||||..|||++.+|++||+|||.
T Consensus 108 EYCGAGSiSDI~R---------~R~K~L~E~EIs~iL~~TLKGL~YLH~~---~KIHRDIKAGNILLNT~G~AKLADFGV 175 (502)
T KOG0574|consen 108 EYCGAGSISDIMR---------ARRKPLSEQEISAVLRDTLKGLQYLHDL---KKIHRDIKAGNILLNTDGIAKLADFGV 175 (502)
T ss_pred hhcCCCcHHHHHH---------HhcCCccHHHHHHHHHHHHhHHHHHHHH---HHHHhhcccccEEEcccchhhhhhccc
Confidence 9999999999996 2457799999999999999999999965 789999999999999999999999999
Q ss_pred ceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhccccCCCchhh
Q 039533 788 ARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKALPDDVMD 867 (949)
Q Consensus 788 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~ 867 (949)
|..+.+.... ...+.||+.|||||++..-.|+.++||||+|++..||..|++||.+.......+ .++
T Consensus 176 AGQLTDTMAK--RNTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMRAIF------MIP----- 242 (502)
T KOG0574|consen 176 AGQLTDTMAK--RNTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPMRAIF------MIP----- 242 (502)
T ss_pred cchhhhhHHh--hCccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCcccccccceeE------ecc-----
Confidence 9876544332 235779999999999999999999999999999999999999997543221111 001
Q ss_pred hcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 039533 868 IVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVH 926 (949)
Q Consensus 868 ~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 926 (949)
..+...+..+++....+.++++.|+...|++|-|+.++++
T Consensus 243 -------------------T~PPPTF~KPE~WS~~F~DFi~~CLiK~PE~R~TA~~L~~ 282 (502)
T KOG0574|consen 243 -------------------TKPPPTFKKPEEWSSEFNDFIRSCLIKKPEERKTALRLCE 282 (502)
T ss_pred -------------------CCCCCCCCChHhhhhHHHHHHHHHhcCCHHHHHHHHHHhh
Confidence 1122334445677788999999999999999999988865
No 136
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=100.00 E-value=1.2e-35 Score=321.43 Aligned_cols=270 Identities=22% Similarity=0.381 Sum_probs=208.9
Q ss_pred HhcCCCCCCeeeeecCceEEEEEEcC----CCEEEEEEEEecCC-CcchHHHHHHHHHHHhcCCCcceeEEeeeeccccc
Q 039533 624 ATSGFSSANLVGVGSFGSVYKGIIDE----GRTTIAVKVFNLQH-HGASRSFIAECKALKSIRHRNLVKVLTACLGADYR 698 (949)
Q Consensus 624 ~~~~y~~~~~lg~G~~g~Vy~~~~~~----~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 698 (949)
..++|.+.+.||+|+||.||+|.+.. .+..|++|++.... ....+.+.+|+.++++++||||+++++++...
T Consensus 4 ~~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~--- 80 (280)
T cd05043 4 SRDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIED--- 80 (280)
T ss_pred chhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecC---
Confidence 35678999999999999999999874 25789999886432 23346788999999999999999999987543
Q ss_pred CCccceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCC
Q 039533 699 GNDFKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYM 778 (949)
Q Consensus 699 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~ 778 (949)
....++++||+++++|.+++....... ......+++.++..++.|++.||+|||+. +++||||||+||++++++
T Consensus 81 -~~~~~~~~~~~~~~~L~~~l~~~~~~~--~~~~~~l~~~~~~~i~~~i~~~l~~LH~~---~i~H~di~p~nil~~~~~ 154 (280)
T cd05043 81 -GEPPFVLYPYMNWGNLKLFLQQCRLGE--ANNPQALSTQQLVHMAIQIACGMSYLHKR---GVIHKDIAARNCVIDEEL 154 (280)
T ss_pred -CCCCEEEEEcCCCCcHHHHHHhccccc--cccccCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccCHhhEEEcCCC
Confidence 346899999999999999986432111 11235689999999999999999999977 899999999999999999
Q ss_pred ceEEeecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHh-CCCCCccccccCchhhhhc
Q 039533 779 TARVGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVI-GKKPIDIMFEGDINLHNFG 857 (949)
Q Consensus 779 ~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~ellt-g~~Pf~~~~~~~~~~~~~~ 857 (949)
.+||+|||+++.+.+...........++..|+|||++.+..++.++|||||||++||+++ |+.||...... ....+.
T Consensus 155 ~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~--~~~~~~ 232 (280)
T cd05043 155 QVKITDNALSRDLFPMDYHCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDPF--EMAAYL 232 (280)
T ss_pred cEEECCCCCcccccCCceEEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCHH--HHHHHH
Confidence 999999999987654433222222346778999999988889999999999999999999 99998643111 111111
Q ss_pred cccCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHHhHHh
Q 039533 858 RKALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHELQSIKNI 934 (949)
Q Consensus 858 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~~~ 934 (949)
.. .... .....++..+.+++.+||+.||++|||+.||++.|+.+.+.
T Consensus 233 ~~------------~~~~------------------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~~~~~ 279 (280)
T cd05043 233 KD------------GYRL------------------AQPINCPDELFAVMACCWALDPEERPSFSQLVQCLTDFHAQ 279 (280)
T ss_pred Hc------------CCCC------------------CCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhc
Confidence 00 0000 00012345678999999999999999999999999998764
No 137
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=100.00 E-value=2.2e-36 Score=335.20 Aligned_cols=252 Identities=21% Similarity=0.213 Sum_probs=197.5
Q ss_pred cCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCC---CcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCcc
Q 039533 626 SGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQH---HGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDF 702 (949)
Q Consensus 626 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 702 (949)
++|.+.+.||+|+||.||+|++..+++.||+|+++... ....+.+.+|+.+++.++|+||+++++++...+ .
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~-----~ 75 (330)
T cd05601 1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKD-----N 75 (330)
T ss_pred CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCC-----e
Confidence 47899999999999999999999899999999997432 223456889999999999999999998865443 7
Q ss_pred ceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEE
Q 039533 703 KASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARV 782 (949)
Q Consensus 703 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl 782 (949)
.++||||+++|+|.+++.. ....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||
T Consensus 76 ~~lv~e~~~~~~L~~~l~~---------~~~~l~~~~~~~~~~qi~~aL~~lH~~---~i~H~Dlkp~NIll~~~~~~kL 143 (330)
T cd05601 76 LYLVMEYQPGGDLLSLLNR---------YEDQFDEDMAQFYLAELVLAIHSVHQM---GYVHRDIKPENVLIDRTGHIKL 143 (330)
T ss_pred EEEEECCCCCCCHHHHHHH---------hcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEcccCchHheEECCCCCEEe
Confidence 8999999999999999962 124588999999999999999999977 9999999999999999999999
Q ss_pred eecccceecCCCCCccccccccCccCccCccccC------CCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhh
Q 039533 783 GDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGV------GCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNF 856 (949)
Q Consensus 783 ~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~------~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~ 856 (949)
+|||++.......... .....||+.|+|||++. +..++.++|||||||++|||++|+.||....... .+
T Consensus 144 ~Dfg~a~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~-~~--- 218 (330)
T cd05601 144 ADFGSAARLTANKMVN-SKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAK-TY--- 218 (330)
T ss_pred ccCCCCeECCCCCcee-eecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHHH-HH---
Confidence 9999998765443321 12345899999999976 4567899999999999999999999996432110 00
Q ss_pred ccccCCCchhhhcccC-CCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 039533 857 GRKALPDDVMDIVDSS-LLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVH 926 (949)
Q Consensus 857 ~~~~~~~~~~~~~d~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 926 (949)
..+.... ....+ .....+..+.+++..|++ +|++||+++++++
T Consensus 219 ---------~~i~~~~~~~~~~-----------------~~~~~~~~~~~li~~ll~-~p~~R~t~~~l~~ 262 (330)
T cd05601 219 ---------NNIMNFQRFLKFP-----------------EDPKVSSDFLDLIQSLLC-GQKERLGYEGLCC 262 (330)
T ss_pred ---------HHHHcCCCccCCC-----------------CCCCCCHHHHHHHHHHcc-ChhhCCCHHHHhC
Confidence 0000000 00000 001223457788889997 9999999999875
No 138
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=100.00 E-value=1.6e-35 Score=318.24 Aligned_cols=262 Identities=22% Similarity=0.297 Sum_probs=206.0
Q ss_pred cCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCC---cchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCcc
Q 039533 626 SGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHH---GASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDF 702 (949)
Q Consensus 626 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 702 (949)
++|++.+.||+|++|.||+|+...+++.+|||.+..... ....++.+|+.+++.++||||+++++++...+ .
T Consensus 2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~-----~ 76 (267)
T cd08229 2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDN-----E 76 (267)
T ss_pred chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCC-----e
Confidence 478889999999999999999988899999998864322 23357889999999999999999999876544 7
Q ss_pred ceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEE
Q 039533 703 KASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARV 782 (949)
Q Consensus 703 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl 782 (949)
.++||||+++++|.+++.... .....+++..+..++.|++.|++|||+. +++|+||||+||+++.++.++|
T Consensus 77 ~~~v~e~~~~~~L~~~~~~~~------~~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l 147 (267)
T cd08229 77 LNIVLELADAGDLSRMIKHFK------KQKRLIPEKTVWKYFVQLCSALEHMHSR---RVMHRDIKPANVFITATGVVKL 147 (267)
T ss_pred EEEEEEecCCCCHHHHHHHhh------ccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEE
Confidence 899999999999999886321 1234689999999999999999999977 9999999999999999999999
Q ss_pred eecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhccccCC
Q 039533 783 GDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKALP 862 (949)
Q Consensus 783 ~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~ 862 (949)
+|||.+.......... ....|+..|+|||+..+..++.++||||||+++|||++|..||.............
T Consensus 148 ~dfg~~~~~~~~~~~~--~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~------ 219 (267)
T cd08229 148 GDLGLGRFFSSKTTAA--HSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKK------ 219 (267)
T ss_pred CcchhhhccccCCccc--ccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccchHHHHhhh------
Confidence 9999987664433211 13458899999999988889999999999999999999999985321110000000
Q ss_pred CchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHHhH
Q 039533 863 DDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHELQSIK 932 (949)
Q Consensus 863 ~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~ 932 (949)
+......+.+ ....+..+.+++.+|++.+|++||||.+|++.++++.
T Consensus 220 -----~~~~~~~~~~------------------~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~~~~~~~ 266 (267)
T cd08229 220 -----IEQCDYPPLP------------------SDHYSEELRQLVNMCINPDPEKRPDITYVYDVAKRMH 266 (267)
T ss_pred -----hhcCCCCCCC------------------cccccHHHHHHHHHhcCCCcccCCCHHHHHHHHhhhc
Confidence 0000000000 0134557889999999999999999999999998763
No 139
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=100.00 E-value=1.3e-35 Score=316.63 Aligned_cols=252 Identities=24% Similarity=0.373 Sum_probs=197.6
Q ss_pred cCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCCcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCcccee
Q 039533 626 SGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFKAS 705 (949)
Q Consensus 626 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 705 (949)
++|++.+.||+|+||.||+|++. ++..||+|.++... ...+.+.+|+.++++++||||+++++++...+ ..++
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~-~~~~~aik~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-----~~~l 76 (256)
T cd05113 4 KDLTFLKELGTGQFGVVKYGKWR-GQYDVAIKMIKEGS-MSEDEFIEEAKVMMKLSHEKLVQLYGVCTKQR-----PIYI 76 (256)
T ss_pred HHeEEeeEecCcccceEEEEEec-CCCcEEEEEcCCCc-ccHHHHHHHHHHHhcCCCCCeeeEEEEEccCC-----CcEE
Confidence 46888999999999999999886 45569999886433 23467899999999999999999999975443 6899
Q ss_pred EeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEeec
Q 039533 706 VYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVGDF 785 (949)
Q Consensus 706 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~Df 785 (949)
||||+++++|.+++.. ....+++.+++.++.|++.||+|||+. +++||||||+||++++++.+||+||
T Consensus 77 v~e~~~~~~l~~~i~~---------~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~nili~~~~~~kl~d~ 144 (256)
T cd05113 77 VTEYMSNGCLLNYLRE---------HGKRFQPSQLLEMCKDVCEGMAYLESK---QFIHRDLAARNCLVDDQGCVKVSDF 144 (256)
T ss_pred EEEcCCCCcHHHHHHh---------cCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccCcceEEEcCCCCEEECCC
Confidence 9999999999999862 123588999999999999999999977 9999999999999999999999999
Q ss_pred ccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHh-CCCCCccccccCchhhhhccccCCCc
Q 039533 786 GLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVI-GKKPIDIMFEGDINLHNFGRKALPDD 864 (949)
Q Consensus 786 G~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~ 864 (949)
|.++........ ......++..|+|||+..+..++.++|||||||++|||++ |+.||....... ...
T Consensus 145 g~~~~~~~~~~~-~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~--~~~--------- 212 (256)
T cd05113 145 GLSRYVLDDEYT-SSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSE--TVE--------- 212 (256)
T ss_pred ccceecCCCcee-ecCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHHH--HHH---------
Confidence 999866443321 1112335678999999988889999999999999999999 999985322110 000
Q ss_pred hhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHH
Q 039533 865 VMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHELQ 929 (949)
Q Consensus 865 ~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~ 929 (949)
.+........+ ...+..+.+++.+||+.+|++||++.++++.|+
T Consensus 213 --~~~~~~~~~~~-------------------~~~~~~~~~li~~cl~~~p~~Rp~~~~ll~~~~ 256 (256)
T cd05113 213 --KVSQGLRLYRP-------------------HLASEKVYAIMYSCWHEKAEERPTFQQLLSSIE 256 (256)
T ss_pred --HHhcCCCCCCC-------------------CCCCHHHHHHHHHHcCCCcccCCCHHHHHHhhC
Confidence 00000000000 012456789999999999999999999998763
No 140
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=100.00 E-value=1.4e-35 Score=325.55 Aligned_cols=278 Identities=21% Similarity=0.266 Sum_probs=198.7
Q ss_pred cCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCC-cchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCccce
Q 039533 626 SGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHH-GASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFKA 704 (949)
Q Consensus 626 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 704 (949)
++|.+.+.||+|+||.||+|++..+++.||+|+++.... .....+.+|++++++++||||+++++++...+ ..+
T Consensus 6 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-----~~~ 80 (309)
T cd07872 6 ETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVHTDK-----SLT 80 (309)
T ss_pred CceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEeeCC-----eEE
Confidence 579999999999999999999988899999999874432 23456788999999999999999999976544 789
Q ss_pred eEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEee
Q 039533 705 SVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVGD 784 (949)
Q Consensus 705 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~D 784 (949)
+||||+++ +|.+++.. ....+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|
T Consensus 81 lv~e~~~~-~l~~~~~~---------~~~~~~~~~~~~~~~qi~~aL~~lH~~---~ivH~dlkp~Nill~~~~~~kl~D 147 (309)
T cd07872 81 LVFEYLDK-DLKQYMDD---------CGNIMSMHNVKIFLYQILRGLAYCHRR---KVLHRDLKPQNLLINERGELKLAD 147 (309)
T ss_pred EEEeCCCC-CHHHHHHh---------cCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEECc
Confidence 99999975 88888752 234578899999999999999999977 999999999999999999999999
Q ss_pred cccceecCCCCCccccccccCccCccCccccCC-CccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhccccCCC
Q 039533 785 FGLARILSPDHTQTSSFSVKGSLGYIAPEYGVG-CEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKALPD 863 (949)
Q Consensus 785 fG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~ 863 (949)
||+++......... ....++..|+|||++.+ ..++.++||||+||++|||+||+.||......+. ..... .....
T Consensus 148 fg~~~~~~~~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~-~~~~~-~~~~~ 223 (309)
T cd07872 148 FGLARAKSVPTKTY--SNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDE-LHLIF-RLLGT 223 (309)
T ss_pred cccceecCCCcccc--ccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHH-HHHHH-HHhCC
Confidence 99997654332211 12357899999998765 4588999999999999999999999964322111 00000 00000
Q ss_pred chhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 039533 864 DVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVH 926 (949)
Q Consensus 864 ~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 926 (949)
...+............. .......+..........+..+.+++.+|++.||++|||++|+++
T Consensus 224 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~ 285 (309)
T cd07872 224 PTEETWPGISSNDEFKN-YNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMK 285 (309)
T ss_pred CCHHHHhhhcchhhhhh-hhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhc
Confidence 00000000000000000 000000000001111234556789999999999999999999987
No 141
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=100.00 E-value=1.9e-35 Score=332.70 Aligned_cols=269 Identities=23% Similarity=0.331 Sum_probs=203.8
Q ss_pred hcCCCCCCeeeeecCceEEEEEEc-----CCCEEEEEEEEecCCC-cchHHHHHHHHHHHhcC-CCcceeEEeeeecccc
Q 039533 625 TSGFSSANLVGVGSFGSVYKGIID-----EGRTTIAVKVFNLQHH-GASRSFIAECKALKSIR-HRNLVKVLTACLGADY 697 (949)
Q Consensus 625 ~~~y~~~~~lg~G~~g~Vy~~~~~-----~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~ 697 (949)
.++|.+.+.||+|+||.||+|++. ..++.||+|+++.... ...+.+.+|++++.++. ||||++++++|...+
T Consensus 36 ~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~~~- 114 (401)
T cd05107 36 RDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACTKGG- 114 (401)
T ss_pred HHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEccCC-
Confidence 346788899999999999999964 2456899999975432 22357889999999997 999999999986544
Q ss_pred cCCccceeEeeeccCCChhhhcCCCCCCC---------------------------------------------------
Q 039533 698 RGNDFKASVYEFMHYGSLEEWLHPFTGED--------------------------------------------------- 726 (949)
Q Consensus 698 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~--------------------------------------------------- 726 (949)
..++||||+++|+|.++++......
T Consensus 115 ----~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (401)
T cd05107 115 ----PIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYV 190 (401)
T ss_pred ----CcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCcc
Confidence 7899999999999999997432100
Q ss_pred -------------------------------------ccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCC
Q 039533 727 -------------------------------------EIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKP 769 (949)
Q Consensus 727 -------------------------------------~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp 769 (949)
........+++..+..++.|++.||+|||+. +++||||||
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrdlkp 267 (401)
T cd05107 191 PMQDMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASK---NCVHRDLAA 267 (401)
T ss_pred chhcchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcC---CcCcccCCc
Confidence 0001123578889999999999999999976 999999999
Q ss_pred CCeeecCCCceEEeecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHh-CCCCCccccc
Q 039533 770 SNVLLDDYMTARVGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVI-GKKPIDIMFE 848 (949)
Q Consensus 770 ~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~ellt-g~~Pf~~~~~ 848 (949)
+||++++++.+||+|||+++...............++..|+|||++.+..++.++|||||||++|||++ |+.||.....
T Consensus 268 ~NiLl~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~ 347 (401)
T cd05107 268 RNVLICEGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELPM 347 (401)
T ss_pred ceEEEeCCCEEEEEecCcceecccccccccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCc
Confidence 999999999999999999987543322222223347789999999988889999999999999999998 8999853311
Q ss_pred cCchhhhhccccCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHH
Q 039533 849 GDINLHNFGRKALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHEL 928 (949)
Q Consensus 849 ~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L 928 (949)
.+. ..+.+....... ....++..+.+++.+||+.+|++||+++||++.|
T Consensus 348 ~~~-------------~~~~~~~~~~~~------------------~p~~~~~~l~~li~~cl~~~P~~RPs~~ell~~L 396 (401)
T cd05107 348 NEQ-------------FYNAIKRGYRMA------------------KPAHASDEIYEIMQKCWEEKFEIRPDFSQLVHLV 396 (401)
T ss_pred hHH-------------HHHHHHcCCCCC------------------CCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHH
Confidence 110 001111000000 0012345688999999999999999999999999
Q ss_pred HHhH
Q 039533 929 QSIK 932 (949)
Q Consensus 929 ~~i~ 932 (949)
+++.
T Consensus 397 ~~~~ 400 (401)
T cd05107 397 GDLL 400 (401)
T ss_pred HHHh
Confidence 8863
No 142
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=100.00 E-value=3.2e-36 Score=340.10 Aligned_cols=203 Identities=23% Similarity=0.282 Sum_probs=171.6
Q ss_pred cCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCC---CcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCcc
Q 039533 626 SGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQH---HGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDF 702 (949)
Q Consensus 626 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 702 (949)
++|++.+.||+|+||.||+|++..+++.||||++.... ......+.+|++++++++||||+++++.+.+.+ .
T Consensus 1 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~-----~ 75 (376)
T cd05598 1 SMFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKD-----N 75 (376)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-----E
Confidence 47999999999999999999999899999999986432 223456889999999999999999999876444 8
Q ss_pred ceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEE
Q 039533 703 KASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARV 782 (949)
Q Consensus 703 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl 782 (949)
.++||||+++|+|.+++.. ...+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||
T Consensus 76 ~~lv~E~~~~g~L~~~i~~----------~~~~~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~Nill~~~~~ikL 142 (376)
T cd05598 76 LYFVMDYIPGGDMMSLLIR----------LGIFEEDLARFYIAELTCAIESVHKM---GFIHRDIKPDNILIDRDGHIKL 142 (376)
T ss_pred EEEEEeCCCCCcHHHHHHh----------cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHEEECCCCCEEE
Confidence 9999999999999999962 34578888999999999999999977 9999999999999999999999
Q ss_pred eecccceecCCCCC-----------------------------------------ccccccccCccCccCccccCCCccC
Q 039533 783 GDFGLARILSPDHT-----------------------------------------QTSSFSVKGSLGYIAPEYGVGCEVS 821 (949)
Q Consensus 783 ~DfG~a~~~~~~~~-----------------------------------------~~~~~~~~gt~~y~aPE~~~~~~~~ 821 (949)
+|||+|..+..... ........||+.|+|||++.+..++
T Consensus 143 ~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~ 222 (376)
T cd05598 143 TDFGLCTGFRWTHDSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYT 222 (376)
T ss_pred EeCCCCccccccccccccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCC
Confidence 99999753311000 0001124699999999999999999
Q ss_pred CccchHHHHHHHHHHHhCCCCCccc
Q 039533 822 TNGDVYSYGILLLELVIGKKPIDIM 846 (949)
Q Consensus 822 ~~sDiwSlGvvl~elltg~~Pf~~~ 846 (949)
.++|||||||++|||++|+.||...
T Consensus 223 ~~~DiwSlGvilyell~G~~Pf~~~ 247 (376)
T cd05598 223 QLCDWWSVGVILYEMLVGQPPFLAD 247 (376)
T ss_pred cceeeeeccceeeehhhCCCCCCCC
Confidence 9999999999999999999999643
No 143
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=100.00 E-value=1.2e-35 Score=326.26 Aligned_cols=241 Identities=24% Similarity=0.314 Sum_probs=188.5
Q ss_pred CeeeeecCceEEEEEEcCCCEEEEEEEEecCC---CcchHHHHHHHHHHHhc-CCCcceeEEeeeecccccCCccceeEe
Q 039533 632 NLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQH---HGASRSFIAECKALKSI-RHRNLVKVLTACLGADYRGNDFKASVY 707 (949)
Q Consensus 632 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~~lv~ 707 (949)
+.||+|+||.||+|++..+++.||||+++... .........|..++... +||||+++++++...+ ..++||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~-----~~~lv~ 75 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKE-----NLFFVM 75 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCC-----EEEEEE
Confidence 47999999999999999889999999997542 23345567788888765 8999999999976544 789999
Q ss_pred eeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEeeccc
Q 039533 708 EFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVGDFGL 787 (949)
Q Consensus 708 e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~DfG~ 787 (949)
||+++|+|.+++. ....+++.++..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+
T Consensus 76 ey~~~g~L~~~l~----------~~~~~~~~~~~~~~~qi~~al~~LH~~---~ivHrdikp~Nil~~~~~~~kl~Dfg~ 142 (316)
T cd05619 76 EYLNGGDLMFHIQ----------SCHKFDLPRATFYAAEIICGLQFLHSK---GIVYRDLKLDNILLDTDGHIKIADFGM 142 (316)
T ss_pred eCCCCCcHHHHHH----------HcCCCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHEEECCCCCEEEccCCc
Confidence 9999999999986 234578899999999999999999977 999999999999999999999999999
Q ss_pred ceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhccccCCCchhh
Q 039533 788 ARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKALPDDVMD 867 (949)
Q Consensus 788 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~ 867 (949)
++......... ....||..|+|||++.+..++.++|||||||++|||++|+.||...... .......
T Consensus 143 ~~~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~--~~~~~i~--------- 209 (316)
T cd05619 143 CKENMLGDAKT--CTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEE--ELFQSIR--------- 209 (316)
T ss_pred ceECCCCCCce--eeecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCHH--HHHHHHH---------
Confidence 87543222111 1345899999999999989999999999999999999999999632111 0000000
Q ss_pred hcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHH-HHH
Q 039533 868 IVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMT-NVV 925 (949)
Q Consensus 868 ~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~-ev~ 925 (949)
...+... ......+.+++.+|++.||++||++. ++.
T Consensus 210 ~~~~~~~----------------------~~~~~~~~~li~~~l~~~P~~R~~~~~~l~ 246 (316)
T cd05619 210 MDNPCYP----------------------RWLTREAKDILVKLFVREPERRLGVKGDIR 246 (316)
T ss_pred hCCCCCC----------------------ccCCHHHHHHHHHHhccCHhhcCCChHHHH
Confidence 0000000 01234567899999999999999997 554
No 144
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=9.5e-36 Score=322.84 Aligned_cols=265 Identities=21% Similarity=0.311 Sum_probs=201.1
Q ss_pred cCCCCCCeeeeecCceEEEEEEcC-----CCEEEEEEEEecCCCc-chHHHHHHHHHHHhcCCCcceeEEeeeecccccC
Q 039533 626 SGFSSANLVGVGSFGSVYKGIIDE-----GRTTIAVKVFNLQHHG-ASRSFIAECKALKSIRHRNLVKVLTACLGADYRG 699 (949)
Q Consensus 626 ~~y~~~~~lg~G~~g~Vy~~~~~~-----~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 699 (949)
.+|.+.+.||+|+||.||+|.+.. .+..||+|+++..... ....+.+|+.++++++||||+++++++...+
T Consensus 5 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~--- 81 (283)
T cd05091 5 STVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQ--- 81 (283)
T ss_pred HHHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCC---
Confidence 347778899999999999998753 3578999998754332 2356889999999999999999999976544
Q ss_pred CccceeEeeeccCCChhhhcCCCCCCC------ccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCee
Q 039533 700 NDFKASVYEFMHYGSLEEWLHPFTGED------EIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVL 773 (949)
Q Consensus 700 ~~~~~lv~e~~~~gsL~~~l~~~~~~~------~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIl 773 (949)
..++++||+++++|.+++....... ........+++..+..++.|++.||+|||+. +|+||||||+||+
T Consensus 82 --~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~---gi~H~dlkp~Nil 156 (283)
T cd05091 82 --PLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSH---HVVHKDLATRNVL 156 (283)
T ss_pred --ceEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHc---CccccccchhheE
Confidence 6899999999999999985221100 0111234588999999999999999999977 8999999999999
Q ss_pred ecCCCceEEeecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHh-CCCCCccccccCch
Q 039533 774 LDDYMTARVGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVI-GKKPIDIMFEGDIN 852 (949)
Q Consensus 774 l~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~ellt-g~~Pf~~~~~~~~~ 852 (949)
+++++.+||+|||+++...............+++.|+|||++.+..++.++|||||||++|||++ |..||...... .
T Consensus 157 ~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~--~ 234 (283)
T cd05091 157 VFDKLNVKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQ--D 234 (283)
T ss_pred ecCCCceEecccccccccccchheeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCHH--H
Confidence 99999999999999886544332222223346789999999988889999999999999999998 88887532111 0
Q ss_pred hhhhccccCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHH
Q 039533 853 LHNFGRKALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHELQS 930 (949)
Q Consensus 853 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~ 930 (949)
.. ..+.+....+. ..+++..+.+++..|++.+|++||+++||++.|+.
T Consensus 235 ~~-----------~~i~~~~~~~~-------------------~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~l~~ 282 (283)
T cd05091 235 VI-----------EMIRNRQVLPC-------------------PDDCPAWVYTLMLECWNEFPSRRPRFKDIHSRLRT 282 (283)
T ss_pred HH-----------HHHHcCCcCCC-------------------CCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHhhC
Confidence 00 00111110000 11345668899999999999999999999999863
No 145
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=100.00 E-value=5.4e-36 Score=338.81 Aligned_cols=202 Identities=22% Similarity=0.290 Sum_probs=171.0
Q ss_pred cCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCC---CcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCcc
Q 039533 626 SGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQH---HGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDF 702 (949)
Q Consensus 626 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 702 (949)
++|++.++||+|+||.||+|++..+++.||+|++.... ......+.+|++++++++||||+++++++.+.+ .
T Consensus 1 ~~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~-----~ 75 (382)
T cd05625 1 SMFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKD-----N 75 (382)
T ss_pred CCcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCC-----E
Confidence 36888999999999999999999899999999987432 223457889999999999999999999976544 7
Q ss_pred ceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEE
Q 039533 703 KASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARV 782 (949)
Q Consensus 703 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl 782 (949)
.++||||+++|+|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||
T Consensus 76 ~~lv~E~~~gg~L~~~l~~----------~~~~~e~~~~~~~~qi~~al~~lH~~---~ivHrDlKp~NILl~~~g~~kL 142 (382)
T cd05625 76 LYFVMDYIPGGDMMSLLIR----------MGIFPEDLARFYIAELTCAVESVHKM---GFIHRDIKPDNILIDRDGHIKL 142 (382)
T ss_pred EEEEEeCCCCCcHHHHHHh----------cCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEE
Confidence 8999999999999999862 23578889999999999999999977 8999999999999999999999
Q ss_pred eecccceecCCCCC---------------------------------------------ccccccccCccCccCccccCC
Q 039533 783 GDFGLARILSPDHT---------------------------------------------QTSSFSVKGSLGYIAPEYGVG 817 (949)
Q Consensus 783 ~DfG~a~~~~~~~~---------------------------------------------~~~~~~~~gt~~y~aPE~~~~ 817 (949)
+|||+++....... ........||+.|+|||++.+
T Consensus 143 ~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~ 222 (382)
T cd05625 143 TDFGLCTGFRWTHDSKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLR 222 (382)
T ss_pred eECCCCccccccccccccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcC
Confidence 99999753211000 000112468999999999999
Q ss_pred CccCCccchHHHHHHHHHHHhCCCCCcc
Q 039533 818 CEVSTNGDVYSYGILLLELVIGKKPIDI 845 (949)
Q Consensus 818 ~~~~~~sDiwSlGvvl~elltg~~Pf~~ 845 (949)
..++.++||||+||++|||++|+.||..
T Consensus 223 ~~~~~~~DiwSlGvil~elltG~~Pf~~ 250 (382)
T cd05625 223 TGYTQLCDWWSVGVILYEMLVGQPPFLA 250 (382)
T ss_pred CCCCCeeeEEechHHHHHHHhCCCCCCC
Confidence 8999999999999999999999999964
No 146
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=9e-36 Score=307.49 Aligned_cols=254 Identities=21% Similarity=0.253 Sum_probs=202.0
Q ss_pred cCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCC---cchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCcc
Q 039533 626 SGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHH---GASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDF 702 (949)
Q Consensus 626 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 702 (949)
+.|+..+.||.|.-|+||+++...++..+|+|++.+... ....+...|-+||+.++||.++.+|+.+... ++
T Consensus 77 ~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~-----~~ 151 (459)
T KOG0610|consen 77 RHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETD-----KY 151 (459)
T ss_pred HHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeecc-----ce
Confidence 346677899999999999999998889999999975432 3346788899999999999999999996544 48
Q ss_pred ceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEE
Q 039533 703 KASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARV 782 (949)
Q Consensus 703 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl 782 (949)
.|+|||||+||+|....+.+ ..+.+++..++-++.+++-||+|||.. |||+|||||+||||.++|++-|
T Consensus 152 ~cl~meyCpGGdL~~LrqkQ--------p~~~fse~~aRFYaAEvl~ALEYLHml---GivYRDLKPENILvredGHIML 220 (459)
T KOG0610|consen 152 SCLVMEYCPGGDLHSLRQKQ--------PGKRFSESAARFYAAEVLLALEYLHML---GIVYRDLKPENILVREDGHIML 220 (459)
T ss_pred eEEEEecCCCccHHHHHhhC--------CCCccchhhHHHHHHHHHHHHHHHHhh---ceeeccCCcceeEEecCCcEEe
Confidence 99999999999999998743 456799999999999999999999966 9999999999999999999999
Q ss_pred eecccceecCCC----------------------------------C--------------------CccccccccCccC
Q 039533 783 GDFGLARILSPD----------------------------------H--------------------TQTSSFSVKGSLG 808 (949)
Q Consensus 783 ~DfG~a~~~~~~----------------------------------~--------------------~~~~~~~~~gt~~ 808 (949)
+||.++....-. . ....+..++||-.
T Consensus 221 sDFDLS~~~~~~Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThE 300 (459)
T KOG0610|consen 221 SDFDLSLRCPVSPTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHE 300 (459)
T ss_pred eeccccccCCCCCeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccc
Confidence 999987543110 0 0011224679999
Q ss_pred ccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhccccCCCchhhhcccCCCCCchhhhhhhchhh
Q 039533 809 YIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKALPDDVMDIVDSSLLPDDEDLILTGNQRQ 888 (949)
Q Consensus 809 y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~ 888 (949)
|.|||++.|...+.++|+|+|||++|||+.|..||....... . +..++-+.+.
T Consensus 301 YlAPEvI~G~GHgsAVDWWtfGIflYEmLyG~TPFKG~~~~~-T------------l~NIv~~~l~-------------- 353 (459)
T KOG0610|consen 301 YLAPEVIRGEGHGSAVDWWTFGIFLYEMLYGTTPFKGSNNKE-T------------LRNIVGQPLK-------------- 353 (459)
T ss_pred cccceeeecCCCCchhhHHHHHHHHHHHHhCCCCcCCCCchh-h------------HHHHhcCCCc--------------
Confidence 999999999999999999999999999999999996432221 1 1222221111
Q ss_pred hhhhhhhHHHHHHHHHHHhhccccCCCCCCCC----HHHHHH
Q 039533 889 KQARINSIIECLISMVRIGVACSMELPQDRTN----MTNVVH 926 (949)
Q Consensus 889 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs----~~ev~~ 926 (949)
++...+.+....++|++.+.+||.+|-. |+||.+
T Consensus 354 ----Fp~~~~vs~~akDLIr~LLvKdP~kRlg~~rGA~eIK~ 391 (459)
T KOG0610|consen 354 ----FPEEPEVSSAAKDLIRKLLVKDPSKRLGSKRGAAEIKR 391 (459)
T ss_pred ----CCCCCcchhHHHHHHHHHhccChhhhhccccchHHhhc
Confidence 1111244567889999999999999998 776643
No 147
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=100.00 E-value=1.1e-35 Score=328.27 Aligned_cols=242 Identities=23% Similarity=0.259 Sum_probs=190.6
Q ss_pred CCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCC---CcchHHHHHHHHHHHhc-CCCcceeEEeeeecccccCCcc
Q 039533 627 GFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQH---HGASRSFIAECKALKSI-RHRNLVKVLTACLGADYRGNDF 702 (949)
Q Consensus 627 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~ 702 (949)
+|.+.+.||+|+||.||+|++..+++.||+|+++... ....+.+..|..++..+ +|++|+++++++...+ .
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~-----~ 75 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMD-----R 75 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCC-----E
Confidence 5888999999999999999999889999999997432 22234567788888877 5899999998865444 7
Q ss_pred ceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEE
Q 039533 703 KASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARV 782 (949)
Q Consensus 703 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl 782 (949)
.++||||+++|+|.+++. ....+++.++..++.|++.||+|||++ +|+||||||+||++++++.+||
T Consensus 76 ~~lv~E~~~~g~L~~~~~----------~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~kL 142 (323)
T cd05616 76 LYFVMEYVNGGDLMYQIQ----------QVGRFKEPHAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDSEGHIKI 142 (323)
T ss_pred EEEEEcCCCCCCHHHHHH----------HcCCCCHHHHHHHHHHHHHHHHHHHHC---CEEecCCCHHHeEECCCCcEEE
Confidence 899999999999999886 234588899999999999999999977 9999999999999999999999
Q ss_pred eecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhccccCC
Q 039533 783 GDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKALP 862 (949)
Q Consensus 783 ~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~ 862 (949)
+|||+++......... ....||+.|+|||++.+..++.++|||||||++|||+||+.||....... ..
T Consensus 143 ~DfG~~~~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~~--~~-------- 210 (323)
T cd05616 143 ADFGMCKENMWDGVTT--KTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDE--LF-------- 210 (323)
T ss_pred ccCCCceecCCCCCcc--ccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCHHH--HH--------
Confidence 9999997643322211 23458999999999999999999999999999999999999996432110 00
Q ss_pred CchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCH
Q 039533 863 DDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNM 921 (949)
Q Consensus 863 ~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~ 921 (949)
..+.+.... .+ ......+.+++.+|++.||++|++.
T Consensus 211 ---~~i~~~~~~-~p-------------------~~~s~~~~~li~~~l~~~p~~R~~~ 246 (323)
T cd05616 211 ---QSIMEHNVA-YP-------------------KSMSKEAVAICKGLMTKHPGKRLGC 246 (323)
T ss_pred ---HHHHhCCCC-CC-------------------CcCCHHHHHHHHHHcccCHHhcCCC
Confidence 001110000 00 1223457889999999999999985
No 148
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=100.00 E-value=2e-35 Score=322.41 Aligned_cols=272 Identities=18% Similarity=0.302 Sum_probs=201.7
Q ss_pred cCCCCCCeeeeecCceEEEEEEcC----------------CCEEEEEEEEecCCC-cchHHHHHHHHHHHhcCCCcceeE
Q 039533 626 SGFSSANLVGVGSFGSVYKGIIDE----------------GRTTIAVKVFNLQHH-GASRSFIAECKALKSIRHRNLVKV 688 (949)
Q Consensus 626 ~~y~~~~~lg~G~~g~Vy~~~~~~----------------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~ 688 (949)
++|++.+.||+|+||.||+|.... ++..||+|+++.... ....++.+|++++++++|+||+++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~ 84 (296)
T cd05095 5 KRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIRL 84 (296)
T ss_pred hhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceE
Confidence 568999999999999999986432 345799999875432 334678999999999999999999
Q ss_pred EeeeecccccCCccceeEeeeccCCChhhhcCCCCCCCcc-ccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCC
Q 039533 689 LTACLGADYRGNDFKASVYEFMHYGSLEEWLHPFTGEDEI-DEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDL 767 (949)
Q Consensus 689 ~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~-~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDl 767 (949)
++++...+ ..++||||+++++|.+++......... ......+++.++..++.|++.|++|||+. +++||||
T Consensus 85 ~~~~~~~~-----~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dl 156 (296)
T cd05095 85 LAVCITSD-----PLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSL---NFVHRDL 156 (296)
T ss_pred EEEEecCC-----ccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHC---CeecccC
Confidence 99976544 689999999999999999743221111 12234588999999999999999999977 8999999
Q ss_pred CCCCeeecCCCceEEeecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHh--CCCCCcc
Q 039533 768 KPSNVLLDDYMTARVGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVI--GKKPIDI 845 (949)
Q Consensus 768 kp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~ellt--g~~Pf~~ 845 (949)
||+||+++.++.++|+|||.++.+.............++..|+|||+..+..++.++|||||||++|||++ |..||..
T Consensus 157 kp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~~ 236 (296)
T cd05095 157 ATRNCLVGKNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYSQ 236 (296)
T ss_pred ChheEEEcCCCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCccc
Confidence 99999999999999999999986544332221112334678999999888889999999999999999998 7788753
Q ss_pred ccccCchhhhhccccCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHH
Q 039533 846 MFEGDINLHNFGRKALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVV 925 (949)
Q Consensus 846 ~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~ 925 (949)
....+ .... ..+........ ...+....++..+.+++.+||+.||++||++.||+
T Consensus 237 ~~~~~--~~~~--------~~~~~~~~~~~---------------~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~ 291 (296)
T cd05095 237 LSDEQ--VIEN--------TGEFFRDQGRQ---------------VYLPKPALCPDSLYKLMLSCWRRNAKERPSFQEIH 291 (296)
T ss_pred cChHH--HHHH--------HHHHHhhcccc---------------ccCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHH
Confidence 22111 0000 00000000000 00000112346788999999999999999999999
Q ss_pred HHHHH
Q 039533 926 HELQS 930 (949)
Q Consensus 926 ~~L~~ 930 (949)
+.|++
T Consensus 292 ~~l~~ 296 (296)
T cd05095 292 ATLLE 296 (296)
T ss_pred HHHhC
Confidence 99863
No 149
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=100.00 E-value=1.5e-35 Score=320.41 Aligned_cols=248 Identities=23% Similarity=0.246 Sum_probs=191.9
Q ss_pred eeeecCceEEEEEEcCCCEEEEEEEEecCCC---cchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCccceeEeeec
Q 039533 634 VGVGSFGSVYKGIIDEGRTTIAVKVFNLQHH---GASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFKASVYEFM 710 (949)
Q Consensus 634 lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~ 710 (949)
||+|+||+||+|.+..+++.||+|++..... ...+.+..|++++++++|+||+++.+++.... ..++||||+
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~-----~~~lv~e~~ 75 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKT-----DLCLVMTIM 75 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCC-----eEEEEEeCC
Confidence 6999999999999998999999999864322 12346778999999999999999998865433 789999999
Q ss_pred cCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEeeccccee
Q 039533 711 HYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVGDFGLARI 790 (949)
Q Consensus 711 ~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~DfG~a~~ 790 (949)
++|+|.+++.... .....+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+|||.+..
T Consensus 76 ~~g~L~~~~~~~~------~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~l~dfg~~~~ 146 (280)
T cd05608 76 NGGDLRYHIYNVD------EENPGFPEPRACFYTAQIISGLEHLHQR---RIIYRDLKPENVLLDNDGNVRISDLGLAVE 146 (280)
T ss_pred CCCCHHHHHHhcc------ccCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEeeCcccee
Confidence 9999998875211 1235689999999999999999999977 999999999999999999999999999987
Q ss_pred cCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhccccCCCchhhhcc
Q 039533 791 LSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKALPDDVMDIVD 870 (949)
Q Consensus 791 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~d 870 (949)
........ ....||+.|+|||++.+..++.++|||||||++|||++|+.||........ ..... .....
T Consensus 147 ~~~~~~~~--~~~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~-~~~~~--------~~~~~ 215 (280)
T cd05608 147 LKDGQSKT--KGYAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVE-NKELK--------QRILN 215 (280)
T ss_pred cCCCCccc--cccCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcchh-HHHHH--------Hhhcc
Confidence 65433221 134589999999999999999999999999999999999999963211100 00000 00000
Q ss_pred cCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCC-----CHHHHHH
Q 039533 871 SSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRT-----NMTNVVH 926 (949)
Q Consensus 871 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----s~~ev~~ 926 (949)
... ......+..+.+++.+|++.||++|| +++|+++
T Consensus 216 ~~~--------------------~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~ 256 (280)
T cd05608 216 DSV--------------------TYPDKFSPASKSFCEALLAKDPEKRLGFRDGNCDGLRT 256 (280)
T ss_pred cCC--------------------CCcccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHhc
Confidence 000 00012345678999999999999999 6677765
No 150
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=100.00 E-value=2.5e-35 Score=322.18 Aligned_cols=259 Identities=24% Similarity=0.366 Sum_probs=201.7
Q ss_pred cCCCCCCeeeeecCceEEEEEEc-----CCCEEEEEEEEecCCC-cchHHHHHHHHHHHhc-CCCcceeEEeeeeccccc
Q 039533 626 SGFSSANLVGVGSFGSVYKGIID-----EGRTTIAVKVFNLQHH-GASRSFIAECKALKSI-RHRNLVKVLTACLGADYR 698 (949)
Q Consensus 626 ~~y~~~~~lg~G~~g~Vy~~~~~-----~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~ 698 (949)
++|.+.+.||+|+||.||+|... ..+..||+|+++.... ...+.+.+|+++++++ +||||+++++++...+
T Consensus 35 ~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~-- 112 (302)
T cd05055 35 NNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTIGG-- 112 (302)
T ss_pred HHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEecCC--
Confidence 56899999999999999999852 3456899999875432 2345788999999999 7999999999976544
Q ss_pred CCccceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCC
Q 039533 699 GNDFKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYM 778 (949)
Q Consensus 699 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~ 778 (949)
..++||||+.+|+|.++++.. ....+++.++..++.|++.|++|||++ +|+||||||+||+++.++
T Consensus 113 ---~~~lv~e~~~~~~L~~~i~~~--------~~~~l~~~~~~~i~~~i~~~l~~lH~~---~ivH~dlkp~Nil~~~~~ 178 (302)
T cd05055 113 ---PILVITEYCCYGDLLNFLRRK--------RESFLTLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNVLLTHGK 178 (302)
T ss_pred ---ceEEEEEcCCCCcHHHHHHhC--------CCCCCCHHHHHHHHHHHHHHHHHHHHC---CeehhhhccceEEEcCCC
Confidence 689999999999999999621 122389999999999999999999977 899999999999999999
Q ss_pred ceEEeecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHh-CCCCCccccccCchhhhhc
Q 039533 779 TARVGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVI-GKKPIDIMFEGDINLHNFG 857 (949)
Q Consensus 779 ~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~ellt-g~~Pf~~~~~~~~~~~~~~ 857 (949)
.++++|||.++...............++..|+|||++.+..++.++||||+||++|||++ |+.||....... .
T Consensus 179 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~-~----- 252 (302)
T cd05055 179 IVKICDFGLARDIMNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDS-K----- 252 (302)
T ss_pred eEEECCCcccccccCCCceeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchH-H-----
Confidence 999999999986654332111122346788999999998889999999999999999998 999986432111 0
Q ss_pred cccCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHHh
Q 039533 858 RKALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHELQSI 931 (949)
Q Consensus 858 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i 931 (949)
..+.++....... ....+..+.+++.+|+..+|++|||+.|+++.|++.
T Consensus 253 -------~~~~~~~~~~~~~------------------~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~~l~~~ 301 (302)
T cd05055 253 -------FYKLIKEGYRMAQ------------------PEHAPAEIYDIMKTCWDADPLKRPTFKQIVQLIGKQ 301 (302)
T ss_pred -------HHHHHHcCCcCCC------------------CCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHhh
Confidence 1111111100000 001234688999999999999999999999999874
No 151
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=100.00 E-value=2.4e-35 Score=316.92 Aligned_cols=258 Identities=22% Similarity=0.415 Sum_probs=201.2
Q ss_pred hcCCCCCCeeeeecCceEEEEEEcCCC---EEEEEEEEecCC-CcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCC
Q 039533 625 TSGFSSANLVGVGSFGSVYKGIIDEGR---TTIAVKVFNLQH-HGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGN 700 (949)
Q Consensus 625 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~---~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 700 (949)
.++|+..+.||+|+||.||+|....++ ..+|+|..+... ....+.+.+|++++++++||||+++.+++...+
T Consensus 4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~---- 79 (268)
T cd05063 4 PSHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFK---- 79 (268)
T ss_pred hHHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCC----
Confidence 356888899999999999999986544 379999886543 233467889999999999999999999976544
Q ss_pred ccceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCce
Q 039533 701 DFKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTA 780 (949)
Q Consensus 701 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~ 780 (949)
..++||||+++++|.+++.. ....+++.++..++.|++.|++|||+. +++||||||+||++++++.+
T Consensus 80 -~~~lv~e~~~~~~L~~~~~~---------~~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~dlkp~Nili~~~~~~ 146 (268)
T cd05063 80 -PAMIITEYMENGALDKYLRD---------HDGEFSSYQLVGMLRGIAAGMKYLSDM---NYVHRDLAARNILVNSNLEC 146 (268)
T ss_pred -CcEEEEEcCCCCCHHHHHHh---------cCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhhEEEcCCCcE
Confidence 78999999999999999862 224588999999999999999999977 89999999999999999999
Q ss_pred EEeecccceecCCCCCcccc-ccccCccCccCccccCCCccCCccchHHHHHHHHHHHh-CCCCCccccccCchhhhhcc
Q 039533 781 RVGDFGLARILSPDHTQTSS-FSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVI-GKKPIDIMFEGDINLHNFGR 858 (949)
Q Consensus 781 kl~DfG~a~~~~~~~~~~~~-~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~ellt-g~~Pf~~~~~~~~~~~~~~~ 858 (949)
||+|||++............ .....+..|+|||++.+..++.++|||||||++||+++ |+.||...... .
T Consensus 147 kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~~--~------ 218 (268)
T cd05063 147 KVSDFGLSRVLEDDPEGTYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSNH--E------ 218 (268)
T ss_pred EECCCccceecccccccceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCHH--H------
Confidence 99999999876543221111 11223467999999988889999999999999999998 99998532111 0
Q ss_pred ccCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHHh
Q 039533 859 KALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHELQSI 931 (949)
Q Consensus 859 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i 931 (949)
....+...... +....++..+.+++.+|++.+|++||++.+|++.|+++
T Consensus 219 ------~~~~i~~~~~~------------------~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~~l~~~ 267 (268)
T cd05063 219 ------VMKAINDGFRL------------------PAPMDCPSAVYQLMLQCWQQDRARRPRFVDIVNLLDKL 267 (268)
T ss_pred ------HHHHHhcCCCC------------------CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 00111000000 00113355688999999999999999999999999876
No 152
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=100.00 E-value=3.2e-35 Score=320.96 Aligned_cols=272 Identities=22% Similarity=0.313 Sum_probs=203.4
Q ss_pred hcCCCCCCeeeeecCceEEEEEEcCC----------------CEEEEEEEEecCCC-cchHHHHHHHHHHHhcCCCccee
Q 039533 625 TSGFSSANLVGVGSFGSVYKGIIDEG----------------RTTIAVKVFNLQHH-GASRSFIAECKALKSIRHRNLVK 687 (949)
Q Consensus 625 ~~~y~~~~~lg~G~~g~Vy~~~~~~~----------------~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~ 687 (949)
.++|++.+.||+|+||.||+|++... +..||+|++..... ...+.+.+|++++++++||||++
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~ 83 (296)
T cd05051 4 RQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIAR 83 (296)
T ss_pred hhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEeE
Confidence 45799999999999999999987643 35689999875432 33467889999999999999999
Q ss_pred EEeeeecccccCCccceeEeeeccCCChhhhcCCCCCCCcc-ccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecC
Q 039533 688 VLTACLGADYRGNDFKASVYEFMHYGSLEEWLHPFTGEDEI-DEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCD 766 (949)
Q Consensus 688 ~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~-~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrD 766 (949)
+++++...+ ..++||||+++++|.+++......... ......+++..++.++.|++.||+|||+. +|+|||
T Consensus 84 ~~~~~~~~~-----~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~---~i~H~d 155 (296)
T cd05051 84 LLGVCTVDP-----PLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESL---NFVHRD 155 (296)
T ss_pred EEEEEecCC-----CcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHc---Cccccc
Confidence 999976543 789999999999999999743221110 11234689999999999999999999977 899999
Q ss_pred CCCCCeeecCCCceEEeecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHh--CCCCCc
Q 039533 767 LKPSNVLLDDYMTARVGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVI--GKKPID 844 (949)
Q Consensus 767 lkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~ellt--g~~Pf~ 844 (949)
|||+||+++.++.++|+|||.++...............++..|+|||++.+..++.++|||||||++|||++ |..||.
T Consensus 156 lkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~ 235 (296)
T cd05051 156 LATRNCLVGKNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYE 235 (296)
T ss_pred cchhceeecCCCceEEccccceeecccCcceeecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCC
Confidence 999999999999999999999986544332222223446788999999988889999999999999999998 677775
Q ss_pred cccccCchhhhhccccCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHH
Q 039533 845 IMFEGDINLHNFGRKALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNV 924 (949)
Q Consensus 845 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev 924 (949)
...... .............. .. ..+....++.++.+++.+|++.||++|||+.||
T Consensus 236 ~~~~~~--~~~~~~~~~~~~~~-----~~------------------~~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el 290 (296)
T cd05051 236 HLTDQQ--VIENAGHFFRDDGR-----QI------------------YLPRPPNCPKDIYELMLECWRRDEEDRPTFREI 290 (296)
T ss_pred CcChHH--HHHHHHhccccccc-----cc------------------cCCCccCCCHHHHHHHHHHhccChhcCCCHHHH
Confidence 322111 00000000000000 00 000011234578999999999999999999999
Q ss_pred HHHHH
Q 039533 925 VHELQ 929 (949)
Q Consensus 925 ~~~L~ 929 (949)
++.|+
T Consensus 291 ~~~L~ 295 (296)
T cd05051 291 HLFLQ 295 (296)
T ss_pred HHHhc
Confidence 99885
No 153
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=100.00 E-value=1.3e-35 Score=326.72 Aligned_cols=242 Identities=23% Similarity=0.252 Sum_probs=191.4
Q ss_pred CeeeeecCceEEEEEEcCCCEEEEEEEEecCC---CcchHHHHHHHHHHHhc-CCCcceeEEeeeecccccCCccceeEe
Q 039533 632 NLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQH---HGASRSFIAECKALKSI-RHRNLVKVLTACLGADYRGNDFKASVY 707 (949)
Q Consensus 632 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~~lv~ 707 (949)
+.||+|+||.||+|++..+++.||||+++... ......+..|.++++.+ +||||+++++++...+ ..++||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~-----~~~lv~ 75 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKD-----RLFFVM 75 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCC-----EEEEEE
Confidence 47999999999999999889999999997432 23345677899999888 6999999999875444 789999
Q ss_pred eeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEeeccc
Q 039533 708 EFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVGDFGL 787 (949)
Q Consensus 708 e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~DfG~ 787 (949)
||+++|+|.+++. ....+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+|||+
T Consensus 76 e~~~~~~L~~~~~----------~~~~l~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~ 142 (318)
T cd05570 76 EYVNGGDLMFHIQ----------RSGRFDEPRARFYAAEIVLGLQFLHER---GIIYRDLKLDNVLLDSEGHIKIADFGM 142 (318)
T ss_pred cCCCCCCHHHHHH----------HcCCCCHHHHHHHHHHHHHHHHHHHhC---CeEccCCCHHHeEECCCCcEEecccCC
Confidence 9999999999886 234589999999999999999999977 999999999999999999999999999
Q ss_pred ceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhccccCCCchhh
Q 039533 788 ARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKALPDDVMD 867 (949)
Q Consensus 788 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~ 867 (949)
++......... ....|+..|+|||++.+..++.++|||||||++|||++|+.||...... .... .
T Consensus 143 ~~~~~~~~~~~--~~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~~--~~~~-----------~ 207 (318)
T cd05570 143 CKEGILGGVTT--STFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDED--ELFQ-----------S 207 (318)
T ss_pred CeecCcCCCcc--cceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCHH--HHHH-----------H
Confidence 87532222211 1345899999999999999999999999999999999999999633211 0000 0
Q ss_pred hcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCH-----HHHHH
Q 039533 868 IVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNM-----TNVVH 926 (949)
Q Consensus 868 ~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~-----~ev~~ 926 (949)
+...... . ....+..+.+++.+|++.||++||++ .++++
T Consensus 208 i~~~~~~-~-------------------~~~~~~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~ 251 (318)
T cd05570 208 ILEDEVR-Y-------------------PRWLSKEAKSILKSFLTKNPEKRLGCLPTGEQDIKG 251 (318)
T ss_pred HHcCCCC-C-------------------CCcCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHhc
Confidence 0000000 0 01224467899999999999999999 77764
No 154
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=100.00 E-value=2.7e-35 Score=314.22 Aligned_cols=251 Identities=24% Similarity=0.379 Sum_probs=202.1
Q ss_pred CCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCC--CcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCccce
Q 039533 627 GFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQH--HGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFKA 704 (949)
Q Consensus 627 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 704 (949)
+|++.+.||+|++|.||+|+...+++.|++|.+.... ....+.+.+|++++++++||||+++++++...+ ..+
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-----~~~ 75 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDKG-----KLN 75 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccCC-----EEE
Confidence 4788899999999999999999889999999987432 334567889999999999999999999976544 789
Q ss_pred eEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEee
Q 039533 705 SVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVGD 784 (949)
Q Consensus 705 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~D 784 (949)
+||||+++++|.+++... ....+++..+..++.|++.||.|||+. +++||||||+||+++.++.++|+|
T Consensus 76 lv~e~~~~~~L~~~l~~~--------~~~~~~~~~~~~i~~~l~~al~~lH~~---~i~h~dl~~~nili~~~~~~~l~d 144 (256)
T cd08529 76 IVMEYAENGDLHKLLKMQ--------RGRPLPEDQVWRFFIQILLGLAHLHSK---KILHRDIKSLNLFLDAYDNVKIGD 144 (256)
T ss_pred EEEEeCCCCcHHHHHHHh--------cCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEEeCCCCEEEcc
Confidence 999999999999999731 134688999999999999999999977 999999999999999999999999
Q ss_pred cccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhccccCCCc
Q 039533 785 FGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKALPDD 864 (949)
Q Consensus 785 fG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~ 864 (949)
||.++......... ....|+..|+|||+..+..++.++|||||||++|||++|+.||....... ..
T Consensus 145 f~~~~~~~~~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~--~~---------- 210 (256)
T cd08529 145 LGVAKLLSDNTNFA--NTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQGA--LI---------- 210 (256)
T ss_pred cccceeccCccchh--hccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHH--HH----------
Confidence 99998765443222 13458899999999998889999999999999999999999996332110 00
Q ss_pred hhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHH
Q 039533 865 VMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHE 927 (949)
Q Consensus 865 ~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 927 (949)
.......... .....+..+.+++.+|++.+|++||++.|+++.
T Consensus 211 -~~~~~~~~~~-------------------~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~ 253 (256)
T cd08529 211 -LKIIRGVFPP-------------------VSQMYSQQLAQLIDQCLTKDYRQRPDTFQLLRN 253 (256)
T ss_pred -HHHHcCCCCC-------------------CccccCHHHHHHHHHHccCCcccCcCHHHHhhC
Confidence 0000000000 001334568999999999999999999999863
No 155
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=100.00 E-value=1.4e-35 Score=326.13 Aligned_cols=241 Identities=23% Similarity=0.267 Sum_probs=188.1
Q ss_pred CeeeeecCceEEEEEEcCCCEEEEEEEEecCC---CcchHHHHHHHHHHHhc-CCCcceeEEeeeecccccCCccceeEe
Q 039533 632 NLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQH---HGASRSFIAECKALKSI-RHRNLVKVLTACLGADYRGNDFKASVY 707 (949)
Q Consensus 632 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~~lv~ 707 (949)
+.||+|+||.||+|++..+++.||+|+++... .........|..++... +||||+++++++...+ ..++||
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~-----~~~lv~ 75 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKE-----HLFFVM 75 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCC-----EEEEEE
Confidence 47999999999999999899999999997532 22345567788888765 8999999999875444 889999
Q ss_pred eeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEeeccc
Q 039533 708 EFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVGDFGL 787 (949)
Q Consensus 708 e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~DfG~ 787 (949)
||+++|+|.+++. ....+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 76 E~~~~g~L~~~i~----------~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivHrDlkp~Nil~~~~~~~kl~Dfg~ 142 (316)
T cd05620 76 EFLNGGDLMFHIQ----------DKGRFDLYRATFYAAEIVCGLQFLHSK---GIIYRDLKLDNVMLDRDGHIKIADFGM 142 (316)
T ss_pred CCCCCCcHHHHHH----------HcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEeCccCC
Confidence 9999999999886 234578899999999999999999977 999999999999999999999999999
Q ss_pred ceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhccccCCCchhh
Q 039533 788 ARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKALPDDVMD 867 (949)
Q Consensus 788 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~ 867 (949)
++........ .....||..|+|||++.+..++.++||||+||++|||++|+.||...... ....
T Consensus 143 ~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~~--~~~~------------ 206 (316)
T cd05620 143 CKENVFGDNR--ASTFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDED--ELFE------------ 206 (316)
T ss_pred CeecccCCCc--eeccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHH--HHHH------------
Confidence 8753322211 12355899999999999999999999999999999999999999632111 0000
Q ss_pred hcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHH-HHH
Q 039533 868 IVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMT-NVV 925 (949)
Q Consensus 868 ~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~-ev~ 925 (949)
.+.......+ ......+.+++.+|++.||++||++. ++.
T Consensus 207 ~~~~~~~~~~-------------------~~~~~~~~~li~~~l~~dP~~R~~~~~~~~ 246 (316)
T cd05620 207 SIRVDTPHYP-------------------RWITKESKDILEKLFERDPTRRLGVVGNIR 246 (316)
T ss_pred HHHhCCCCCC-------------------CCCCHHHHHHHHHHccCCHHHcCCChHHHH
Confidence 0000000000 01234567899999999999999985 554
No 156
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=100.00 E-value=1.8e-35 Score=329.70 Aligned_cols=283 Identities=20% Similarity=0.223 Sum_probs=200.1
Q ss_pred HHHhcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCC--cchHHHHHHHHHHHhcCCCcceeEEeeeecccc-c
Q 039533 622 YNATSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHH--GASRSFIAECKALKSIRHRNLVKVLTACLGADY-R 698 (949)
Q Consensus 622 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~-~ 698 (949)
....++|++.+.||+|+||.||+|.+..+++.||||++..... ...+.+.+|+.++++++||||+++++++..... .
T Consensus 11 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 90 (343)
T cd07878 11 WEVPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIE 90 (343)
T ss_pred hhhhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhccccccc
Confidence 3456789999999999999999999988899999999864322 233567789999999999999999988754321 1
Q ss_pred CCccceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCC
Q 039533 699 GNDFKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYM 778 (949)
Q Consensus 699 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~ 778 (949)
.....+++++++ +++|.+++. ...+++..+..++.|++.||+|||+. +|+||||||+||++++++
T Consensus 91 ~~~~~~~~~~~~-~~~l~~~~~-----------~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrdikp~Nil~~~~~ 155 (343)
T cd07878 91 NFNEVYLVTNLM-GADLNNIVK-----------CQKLSDEHVQFLIYQLLRGLKYIHSA---GIIHRDLKPSNVAVNEDC 155 (343)
T ss_pred ccCcEEEEeecC-CCCHHHHHh-----------cCCCCHHHHHHHHHHHHHHHHHHHHC---CeecccCChhhEEECCCC
Confidence 223568999988 789988875 23588999999999999999999977 999999999999999999
Q ss_pred ceEEeecccceecCCCCCccccccccCccCccCccccCC-CccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhc
Q 039533 779 TARVGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVG-CEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFG 857 (949)
Q Consensus 779 ~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~ 857 (949)
.+||+|||+++....... ...||..|+|||++.+ ..++.++|||||||++|||++|+.||......+ .+....
T Consensus 156 ~~kl~Dfg~~~~~~~~~~-----~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~-~~~~~~ 229 (343)
T cd07878 156 ELRILDFGLARQADDEMT-----GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYID-QLKRIM 229 (343)
T ss_pred CEEEcCCccceecCCCcC-----CccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHH-HHHHHH
Confidence 999999999987543321 3458999999999877 468899999999999999999999996432110 000000
Q ss_pred cccCCCchhhhcccCCCCCchhhhhhhchhhhhhhh-hhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHH
Q 039533 858 RKALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARI-NSIIECLISMVRIGVACSMELPQDRTNMTNVVHE 927 (949)
Q Consensus 858 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 927 (949)
........+...... ..............+...+ .........+.+++.+|++.||++|||+.|+++.
T Consensus 230 -~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~h 298 (343)
T cd07878 230 -EVVGTPSPEVLKKIS-SEHARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALAH 298 (343)
T ss_pred -HHhCCCCHHHHHhcc-hhhHHHHhhccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 000000000000000 0000000000000000000 0011223457899999999999999999999854
No 157
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=100.00 E-value=1.1e-35 Score=334.93 Aligned_cols=282 Identities=20% Similarity=0.227 Sum_probs=200.0
Q ss_pred CCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCC--CcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCccce
Q 039533 627 GFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQH--HGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFKA 704 (949)
Q Consensus 627 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 704 (949)
+|++.+.||+|+||.||+|.+..+++.||||++.... ....+++.+|+++++.++||||+++++++...+.......+
T Consensus 1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 80 (372)
T cd07853 1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIY 80 (372)
T ss_pred CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEE
Confidence 4788999999999999999998889999999986432 22346788999999999999999999998655433334679
Q ss_pred eEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEee
Q 039533 705 SVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVGD 784 (949)
Q Consensus 705 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~D 784 (949)
+||||+. ++|.+++. ....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|
T Consensus 81 lv~e~~~-~~l~~~~~----------~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~Nili~~~~~~kL~D 146 (372)
T cd07853 81 VVTELMQ-SDLHKIIV----------SPQPLSSDHVKVFLYQILRGLKYLHSA---GILHRDIKPGNLLVNSNCVLKICD 146 (372)
T ss_pred EEeeccc-cCHHHHHh----------cCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChHHEEECCCCCEEecc
Confidence 9999996 57888775 234689999999999999999999977 999999999999999999999999
Q ss_pred cccceecCCCCCccccccccCccCccCccccCCC-ccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhccccCCC
Q 039533 785 FGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGC-EVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKALPD 863 (949)
Q Consensus 785 fG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~ 863 (949)
||+++......... .....++..|+|||++.+. .++.++||||+||++|||++|+.||....... ...........
T Consensus 147 fg~a~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~--~~~~i~~~~g~ 223 (372)
T cd07853 147 FGLARVEEPDESKH-MTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQ--QLDLITDLLGT 223 (372)
T ss_pred ccceeecccCcccc-CCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHH--HHHHHHHHcCC
Confidence 99998754432211 1234578999999998875 47899999999999999999999996432211 00000000000
Q ss_pred c-hhhhcccCCCCCchhhhhhhchhh--hhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHH
Q 039533 864 D-VMDIVDSSLLPDDEDLILTGNQRQ--KQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHE 927 (949)
Q Consensus 864 ~-~~~~~d~~l~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 927 (949)
. ..++.. ... .....+....... ....+....+..+.+.+++.+|++.||++|||+.|+++.
T Consensus 224 ~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h 288 (372)
T cd07853 224 PSLEAMRS-ACE-GARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALAH 288 (372)
T ss_pred CCHHHHHH-hhH-HHHHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcC
Confidence 0 000000 000 0000000000000 000000011224568899999999999999999999863
No 158
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=1.6e-35 Score=318.25 Aligned_cols=253 Identities=22% Similarity=0.285 Sum_probs=198.2
Q ss_pred cCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCCcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCcccee
Q 039533 626 SGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFKAS 705 (949)
Q Consensus 626 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 705 (949)
++|++.+.||+|+||.||+|++..+++.||+|+++.........+.+|+.+++.++||||+++++++...+ ..++
T Consensus 9 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~-----~~~l 83 (267)
T cd06645 9 EDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRD-----KLWI 83 (267)
T ss_pred HHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCC-----EEEE
Confidence 47888899999999999999998889999999997665444567889999999999999999999876544 7899
Q ss_pred EeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEeec
Q 039533 706 VYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVGDF 785 (949)
Q Consensus 706 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~Df 785 (949)
||||+++++|.+++. ....+++.++..++.|++.|+.|||+. +++||||||+||+++.++.+||+||
T Consensus 84 v~e~~~~~~L~~~~~----------~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nili~~~~~~~l~df 150 (267)
T cd06645 84 CMEFCGGGSLQDIYH----------VTGPLSESQIAYVSRETLQGLYYLHSK---GKMHRDIKGANILLTDNGHVKLADF 150 (267)
T ss_pred EEeccCCCcHHHHHH----------hcCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEECcc
Confidence 999999999999986 234588999999999999999999977 8999999999999999999999999
Q ss_pred ccceecCCCCCccccccccCccCccCccccC---CCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhccccCC
Q 039533 786 GLARILSPDHTQTSSFSVKGSLGYIAPEYGV---GCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKALP 862 (949)
Q Consensus 786 G~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~ 862 (949)
|.+.......... ....|+..|+|||++. ...++.++|||||||++|||++|+.||.......... .....
T Consensus 151 g~~~~~~~~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~~~-~~~~~--- 224 (267)
T cd06645 151 GVSAQITATIAKR--KSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALF-LMTKS--- 224 (267)
T ss_pred eeeeEccCccccc--ccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhhHH-hhhcc---
Confidence 9987664332211 2345899999999874 4458899999999999999999999985332111000 00000
Q ss_pred CchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 039533 863 DDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVH 926 (949)
Q Consensus 863 ~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 926 (949)
...+.. .......+..+.+++.+|++.+|++||+++||++
T Consensus 225 ---------~~~~~~---------------~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~ll~ 264 (267)
T cd06645 225 ---------NFQPPK---------------LKDKMKWSNSFHHFVKMALTKNPKKRPTAEKLLQ 264 (267)
T ss_pred ---------CCCCCc---------------ccccCCCCHHHHHHHHHHccCCchhCcCHHHHhc
Confidence 000000 0000012345788999999999999999999875
No 159
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=4.1e-35 Score=321.19 Aligned_cols=271 Identities=20% Similarity=0.341 Sum_probs=206.2
Q ss_pred HhcCCCCCCeeeeecCceEEEEEEc-------CCCEEEEEEEEecCC-CcchHHHHHHHHHHHhc-CCCcceeEEeeeec
Q 039533 624 ATSGFSSANLVGVGSFGSVYKGIID-------EGRTTIAVKVFNLQH-HGASRSFIAECKALKSI-RHRNLVKVLTACLG 694 (949)
Q Consensus 624 ~~~~y~~~~~lg~G~~g~Vy~~~~~-------~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~ 694 (949)
..++|.+.+.||+|+||.||+|+.. .++..||+|+++... ....+.+.+|+.+++.+ +||||+++++++..
T Consensus 13 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~ 92 (304)
T cd05101 13 SRDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ 92 (304)
T ss_pred cHHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEEec
Confidence 3467889999999999999999752 234579999986432 23346788999999999 89999999999764
Q ss_pred ccccCCccceeEeeeccCCChhhhcCCCCCCCcc------ccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCC
Q 039533 695 ADYRGNDFKASVYEFMHYGSLEEWLHPFTGEDEI------DEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLK 768 (949)
Q Consensus 695 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~------~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlk 768 (949)
.. ..++||||+++|+|.+++......... ......+++.++..++.|++.||+|||++ +++|||||
T Consensus 93 ~~-----~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~---givH~dlk 164 (304)
T cd05101 93 DG-----PLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQ---KCIHRDLA 164 (304)
T ss_pred CC-----ceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHC---Ceeecccc
Confidence 43 789999999999999999743211100 01234688999999999999999999977 99999999
Q ss_pred CCCeeecCCCceEEeecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHh-CCCCCcccc
Q 039533 769 PSNVLLDDYMTARVGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVI-GKKPIDIMF 847 (949)
Q Consensus 769 p~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~ellt-g~~Pf~~~~ 847 (949)
|+||++++++.+||+|||.++...............++..|+|||++.+..++.++||||||+++|||++ |..||....
T Consensus 165 p~Nili~~~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~ 244 (304)
T cd05101 165 ARNVLVTENNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIP 244 (304)
T ss_pred cceEEEcCCCcEEECCCccceecccccccccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCC
Confidence 9999999999999999999987654333222222335678999999988889999999999999999998 788875321
Q ss_pred ccCchhhhhccccCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHH
Q 039533 848 EGDINLHNFGRKALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHE 927 (949)
Q Consensus 848 ~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 927 (949)
.. . ..+.+...... .....++..+.+++.+||+.+|++|||+.||++.
T Consensus 245 ~~-----~---------~~~~~~~~~~~------------------~~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~ 292 (304)
T cd05101 245 VE-----E---------LFKLLKEGHRM------------------DKPANCTNELYMMMRDCWHAIPSHRPTFKQLVED 292 (304)
T ss_pred HH-----H---------HHHHHHcCCcC------------------CCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHH
Confidence 11 0 00001000000 0001345668899999999999999999999999
Q ss_pred HHHhHHh
Q 039533 928 LQSIKNI 934 (949)
Q Consensus 928 L~~i~~~ 934 (949)
|+++...
T Consensus 293 l~~~~~~ 299 (304)
T cd05101 293 LDRILTL 299 (304)
T ss_pred HHHHHHh
Confidence 9998765
No 160
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=100.00 E-value=4.6e-35 Score=313.42 Aligned_cols=254 Identities=27% Similarity=0.438 Sum_probs=200.1
Q ss_pred cCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCCcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCcccee
Q 039533 626 SGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFKAS 705 (949)
Q Consensus 626 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 705 (949)
++|++.++||+|+||.||+|++..+ ..||+|+++.... ..+++.+|++++++++||||+++++++.. ...++
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~~~-~~valK~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~~~~~~~------~~~~l 77 (262)
T cd05071 6 ESLRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVSE------EPIYI 77 (262)
T ss_pred HHeeEeeecCCCCCCcEEEEEecCC-ceEEEEecccCcc-CHHHHHHHHHHHHhCCCCCcceEEEEECC------CCcEE
Confidence 5689999999999999999998744 5699999875332 34678999999999999999999987532 25789
Q ss_pred EeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEeec
Q 039533 706 VYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVGDF 785 (949)
Q Consensus 706 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~Df 785 (949)
||||+++|+|.+++... ....+++..+..++.|++.||+|||+. +++||||||+||++++++.+||+||
T Consensus 78 v~e~~~~~~L~~~~~~~--------~~~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~Nill~~~~~~~L~df 146 (262)
T cd05071 78 VTEYMSKGSLLDFLKGE--------MGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADF 146 (262)
T ss_pred EEEcCCCCcHHHHHhhc--------cccCCCHHHHHHHHHHHHHHHHHHHHC---CccccccCcccEEEcCCCcEEeccC
Confidence 99999999999999621 224578999999999999999999977 8999999999999999999999999
Q ss_pred ccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHh-CCCCCccccccCchhhhhccccCCCc
Q 039533 786 GLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVI-GKKPIDIMFEGDINLHNFGRKALPDD 864 (949)
Q Consensus 786 G~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~ 864 (949)
|.++......... .....++..|+|||+..+..++.++|||||||++|||+| |+.||.......
T Consensus 147 g~~~~~~~~~~~~-~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~~-------------- 211 (262)
T cd05071 147 GLARLIEDNEYTA-RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE-------------- 211 (262)
T ss_pred Cceeecccccccc-ccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChHH--------------
Confidence 9998765433211 112346778999999988889999999999999999999 888885332110
Q ss_pred hhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHHh
Q 039533 865 VMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHELQSI 931 (949)
Q Consensus 865 ~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i 931 (949)
..+....... .+...+.+..+.+++.+|++.+|++||+++++++.|+..
T Consensus 212 ~~~~~~~~~~------------------~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~~l~~~ 260 (262)
T cd05071 212 VLDQVERGYR------------------MPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDY 260 (262)
T ss_pred HHHHHhcCCC------------------CCCccccCHHHHHHHHHHccCCcccCCCHHHHHHHHHHh
Confidence 0000000000 000123456788999999999999999999999999863
No 161
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=100.00 E-value=3.5e-35 Score=326.88 Aligned_cols=271 Identities=24% Similarity=0.327 Sum_probs=202.9
Q ss_pred hcCCCCCCeeeeecCceEEEEEEc-----CCCEEEEEEEEecCCC-cchHHHHHHHHHHHhc-CCCcceeEEeeeecccc
Q 039533 625 TSGFSSANLVGVGSFGSVYKGIID-----EGRTTIAVKVFNLQHH-GASRSFIAECKALKSI-RHRNLVKVLTACLGADY 697 (949)
Q Consensus 625 ~~~y~~~~~lg~G~~g~Vy~~~~~-----~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~ 697 (949)
.++|++.+.||+|+||.||+|.+. .+++.||||+++.... .....+.+|+.++.++ +||||+++++++...+
T Consensus 6 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~- 84 (343)
T cd05103 6 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPG- 84 (343)
T ss_pred hhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeecCC-
Confidence 357999999999999999999852 3568899999975432 2345788999999999 6899999999875432
Q ss_pred cCCccceeEeeeccCCChhhhcCCCCCCCc--------------------------------------------------
Q 039533 698 RGNDFKASVYEFMHYGSLEEWLHPFTGEDE-------------------------------------------------- 727 (949)
Q Consensus 698 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~-------------------------------------------------- 727 (949)
...++||||+++|+|.+++........
T Consensus 85 ---~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (343)
T cd05103 85 ---GPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDV 161 (343)
T ss_pred ---CceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccc
Confidence 357899999999999999864221000
Q ss_pred -------cccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEeecccceecCCCCCcccc
Q 039533 728 -------IDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVGDFGLARILSPDHTQTSS 800 (949)
Q Consensus 728 -------~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~ 800 (949)
.......+++..+..++.|++.||+|||++ +|+||||||+||++++++.+||+|||+++...........
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~ 238 (343)
T cd05103 162 EEEEAEQEDLYKKVLTLEDLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRK 238 (343)
T ss_pred hhhhhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCccCeEEEcCCCcEEEEecccccccccCcchhhc
Confidence 000113478899999999999999999977 9999999999999999999999999999875433322222
Q ss_pred ccccCccCccCccccCCCccCCccchHHHHHHHHHHHh-CCCCCccccccCchhhhhccccCCCchhhhcccCCCCCchh
Q 039533 801 FSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVI-GKKPIDIMFEGDINLHNFGRKALPDDVMDIVDSSLLPDDED 879 (949)
Q Consensus 801 ~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 879 (949)
....++..|+|||+..+..++.++||||||+++|||++ |..||....... .. ...+........
T Consensus 239 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~-~~------------~~~~~~~~~~~~-- 303 (343)
T cd05103 239 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE-EF------------CRRLKEGTRMRA-- 303 (343)
T ss_pred CCCCCCcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccH-HH------------HHHHhccCCCCC--
Confidence 22345678999999988889999999999999999997 999985321110 00 000000000000
Q ss_pred hhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHHhHH
Q 039533 880 LILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHELQSIKN 933 (949)
Q Consensus 880 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~~ 933 (949)
.......+.+++..||+.+|++|||+.||++.|+.+.+
T Consensus 304 ----------------~~~~~~~~~~~~~~cl~~~p~~Rps~~eil~~l~~~~~ 341 (343)
T cd05103 304 ----------------PDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 341 (343)
T ss_pred ----------------CCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 00123457899999999999999999999999998765
No 162
>PTZ00036 glycogen synthase kinase; Provisional
Probab=100.00 E-value=1.4e-35 Score=339.42 Aligned_cols=285 Identities=21% Similarity=0.286 Sum_probs=197.5
Q ss_pred hcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCCcchHHHHHHHHHHHhcCCCcceeEEeeeecccccC---Cc
Q 039533 625 TSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHGASRSFIAECKALKSIRHRNLVKVLTACLGADYRG---ND 701 (949)
Q Consensus 625 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~---~~ 701 (949)
..+|++.+.||+|+||.||+|.+..+++.||||++.... ....+|+.++++++||||+++++++....+.. ..
T Consensus 65 ~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~----~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~~ 140 (440)
T PTZ00036 65 NKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP----QYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKNI 140 (440)
T ss_pred CCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc----chHHHHHHHHHhcCCCCCcceeeeEeecccccCCCce
Confidence 467999999999999999999998889999999885332 23457999999999999999998875433221 23
Q ss_pred cceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCC-ce
Q 039533 702 FKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYM-TA 780 (949)
Q Consensus 702 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~-~~ 780 (949)
..++||||+++ ++.+++.... .....+++..+..++.|++.||+|||+. +|+||||||+||+++.++ .+
T Consensus 141 ~l~lvmE~~~~-~l~~~~~~~~------~~~~~l~~~~~~~~~~qi~~gL~yLH~~---~IiHrDLKp~NILl~~~~~~v 210 (440)
T PTZ00036 141 FLNVVMEFIPQ-TVHKYMKHYA------RNNHALPLFLVKLYSYQLCRALAYIHSK---FICHRDLKPQNLLIDPNTHTL 210 (440)
T ss_pred EEEEEEecCCc-cHHHHHHHHh------hcCCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCcCHHHEEEcCCCCce
Confidence 46789999975 7777764211 1235688999999999999999999977 899999999999998654 79
Q ss_pred EEeecccceecCCCCCccccccccCccCccCccccCCC-ccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhccc
Q 039533 781 RVGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGC-EVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRK 859 (949)
Q Consensus 781 kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~ 859 (949)
||+|||+|+........ ....||+.|+|||++.+. .++.++|||||||++|||++|.+||......+ .+......
T Consensus 211 kL~DFGla~~~~~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~-~~~~i~~~ 286 (440)
T PTZ00036 211 KLCDFGSAKNLLAGQRS---VSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVD-QLVRIIQV 286 (440)
T ss_pred eeeccccchhccCCCCc---ccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHHH
Confidence 99999999876543322 134589999999998764 68999999999999999999999996432111 11111100
Q ss_pred cCCC--chhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH--HHHHhH
Q 039533 860 ALPD--DVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVH--ELQSIK 932 (949)
Q Consensus 860 ~~~~--~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~--~L~~i~ 932 (949)
.-.. +......+... +..... ......+.......+..+.+++.+|++.||++|||+.|+++ .++.++
T Consensus 287 ~~~p~~~~~~~~~~~~~----~~~~~~-~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~hp~f~~~~ 358 (440)
T PTZ00036 287 LGTPTEDQLKEMNPNYA----DIKFPD-VKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALADPFFDDLR 358 (440)
T ss_pred hCCCCHHHHHHhchhhh----cccCCc-cCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhCChhHHhhh
Confidence 0000 00000000000 000000 00000000001123457889999999999999999999984 344443
No 163
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=100.00 E-value=2.7e-35 Score=322.13 Aligned_cols=271 Identities=24% Similarity=0.333 Sum_probs=203.1
Q ss_pred hcCCCCCCeeeeecCceEEEEEEcCCCE--EEEEEEEecCC-CcchHHHHHHHHHHHhc-CCCcceeEEeeeecccccCC
Q 039533 625 TSGFSSANLVGVGSFGSVYKGIIDEGRT--TIAVKVFNLQH-HGASRSFIAECKALKSI-RHRNLVKVLTACLGADYRGN 700 (949)
Q Consensus 625 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~--~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~ 700 (949)
.++|++.+.||+|+||.||+|.+..++. .+|+|.++... ....+.+.+|++++.++ +||||+++++++...+
T Consensus 6 ~~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~---- 81 (303)
T cd05088 6 WNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRG---- 81 (303)
T ss_pred hhhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCC----
Confidence 4578999999999999999999876665 45777765332 22345788999999999 8999999999975544
Q ss_pred ccceeEeeeccCCChhhhcCCCCCCCc------cccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeee
Q 039533 701 DFKASVYEFMHYGSLEEWLHPFTGEDE------IDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLL 774 (949)
Q Consensus 701 ~~~~lv~e~~~~gsL~~~l~~~~~~~~------~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll 774 (949)
..++||||+++++|.+++........ .......+++.+++.++.|++.|++|||+. +++||||||+||++
T Consensus 82 -~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---gi~H~dlkp~Nili 157 (303)
T cd05088 82 -YLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILV 157 (303)
T ss_pred -CceEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhC---CccccccchheEEe
Confidence 78999999999999999974321110 011234689999999999999999999977 99999999999999
Q ss_pred cCCCceEEeecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHh-CCCCCccccccCchh
Q 039533 775 DDYMTARVGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVI-GKKPIDIMFEGDINL 853 (949)
Q Consensus 775 ~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~ellt-g~~Pf~~~~~~~~~~ 853 (949)
++++.+||+|||+++...... ......++..|+|||++.+..++.++|||||||++|||+| |..||......+ .
T Consensus 158 ~~~~~~kl~dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~--~ 232 (303)
T cd05088 158 GENYVAKIADFGLSRGQEVYV---KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAE--L 232 (303)
T ss_pred cCCCcEEeCccccCcccchhh---hcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCChHH--H
Confidence 999999999999986432111 1111224678999999988889999999999999999998 999985321110 0
Q ss_pred hhhccccCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHHhHH
Q 039533 854 HNFGRKALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHELQSIKN 933 (949)
Q Consensus 854 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~~ 933 (949)
.+.+...... +.....+..+.+++.+|++.+|++||++.++++.++++..
T Consensus 233 ------------~~~~~~~~~~------------------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~l~~~~~ 282 (303)
T cd05088 233 ------------YEKLPQGYRL------------------EKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLE 282 (303)
T ss_pred ------------HHHHhcCCcC------------------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 0000000000 0001224467899999999999999999999999998866
Q ss_pred hhccC
Q 039533 934 ILLGV 938 (949)
Q Consensus 934 ~~~~~ 938 (949)
.....
T Consensus 283 ~~~~~ 287 (303)
T cd05088 283 ERKTY 287 (303)
T ss_pred hhhhh
Confidence 65443
No 164
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=100.00 E-value=4.4e-35 Score=319.51 Aligned_cols=271 Identities=20% Similarity=0.314 Sum_probs=199.2
Q ss_pred cCCCCCCeeeeecCceEEEEEEcCC--------------CEEEEEEEEecCCC-cchHHHHHHHHHHHhcCCCcceeEEe
Q 039533 626 SGFSSANLVGVGSFGSVYKGIIDEG--------------RTTIAVKVFNLQHH-GASRSFIAECKALKSIRHRNLVKVLT 690 (949)
Q Consensus 626 ~~y~~~~~lg~G~~g~Vy~~~~~~~--------------~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~ 690 (949)
++|++.+.||+|+||.||+|+.... ...||+|+++.... .....+.+|++++++++|+|++++++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~ 84 (295)
T cd05097 5 QQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLLG 84 (295)
T ss_pred HhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeEEE
Confidence 5799999999999999999987532 23589999875422 23457889999999999999999999
Q ss_pred eeecccccCCccceeEeeeccCCChhhhcCCCCCCCc--cccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCC
Q 039533 691 ACLGADYRGNDFKASVYEFMHYGSLEEWLHPFTGEDE--IDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLK 768 (949)
Q Consensus 691 ~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~--~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlk 768 (949)
++...+ ..++||||+++++|.+++........ .......+++..++.++.|++.|++|||+. +++|||||
T Consensus 85 ~~~~~~-----~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlk 156 (295)
T cd05097 85 VCVSDD-----PLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASL---NFVHRDLA 156 (295)
T ss_pred EEcCCC-----ccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhc---CeeccccC
Confidence 976444 78999999999999999863211100 011123478899999999999999999977 89999999
Q ss_pred CCCeeecCCCceEEeecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHh--CCCCCccc
Q 039533 769 PSNVLLDDYMTARVGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVI--GKKPIDIM 846 (949)
Q Consensus 769 p~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~ellt--g~~Pf~~~ 846 (949)
|+||++++++.+||+|||++................++..|+|||+..+..++.++|||||||++|||++ |..||...
T Consensus 157 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~ 236 (295)
T cd05097 157 TRNCLVGNHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSLL 236 (295)
T ss_pred hhhEEEcCCCcEEecccccccccccCcceeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCccc
Confidence 9999999999999999999976543332221222345778999999988889999999999999999998 66777532
Q ss_pred cccCchhhhhccccCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 039533 847 FEGDINLHNFGRKALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVH 926 (949)
Q Consensus 847 ~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 926 (949)
.... ............. ....... ....+..+.+++.+|++.+|++||++++|++
T Consensus 237 ~~~~--~~~~~~~~~~~~~----~~~~~~~-------------------~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~ 291 (295)
T cd05097 237 SDEQ--VIENTGEFFRNQG----RQIYLSQ-------------------TPLCPSPVFKLMMRCWSRDIKDRPTFNKIHH 291 (295)
T ss_pred ChHH--HHHHHHHhhhhcc----ccccCCC-------------------CCCCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence 2111 0000000000000 0000000 0023457899999999999999999999999
Q ss_pred HHH
Q 039533 927 ELQ 929 (949)
Q Consensus 927 ~L~ 929 (949)
.|+
T Consensus 292 ~l~ 294 (295)
T cd05097 292 FLR 294 (295)
T ss_pred HHh
Confidence 886
No 165
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=100.00 E-value=3.6e-35 Score=318.36 Aligned_cols=272 Identities=24% Similarity=0.346 Sum_probs=202.4
Q ss_pred CCCCCCeeeeecCceEEEEEE----cCCCEEEEEEEEecCC-CcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCc
Q 039533 627 GFSSANLVGVGSFGSVYKGII----DEGRTTIAVKVFNLQH-HGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGND 701 (949)
Q Consensus 627 ~y~~~~~lg~G~~g~Vy~~~~----~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 701 (949)
-|++.+.||+|+||.||.|+. ..++..||+|.++... ....+.+.+|++++++++||||+++++++... +..
T Consensus 5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~---~~~ 81 (284)
T cd05079 5 FLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTED---GGN 81 (284)
T ss_pred hhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecC---CCC
Confidence 468889999999999999985 3467889999987443 23346789999999999999999999987643 234
Q ss_pred cceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceE
Q 039533 702 FKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTAR 781 (949)
Q Consensus 702 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~k 781 (949)
..++||||+++++|.+++.. ....+++.++..++.|++.||+|||++ +++||||||+||+++.++.+|
T Consensus 82 ~~~lv~e~~~g~~L~~~l~~---------~~~~~~~~~~~~i~~~i~~aL~~lH~~---gi~H~dlkp~Nil~~~~~~~~ 149 (284)
T cd05079 82 GIKLIMEFLPSGSLKEYLPR---------NKNKINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVK 149 (284)
T ss_pred ceEEEEEccCCCCHHHHHHh---------ccCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecccchheEEEcCCCCEE
Confidence 67899999999999999852 123589999999999999999999977 999999999999999999999
Q ss_pred EeecccceecCCCCCc-cccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhcccc
Q 039533 782 VGDFGLARILSPDHTQ-TSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKA 860 (949)
Q Consensus 782 l~DfG~a~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~ 860 (949)
|+|||.++........ .......++..|+|||+..+..++.++|||||||++|||+|++.|+........ ......
T Consensus 150 l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~---~~~~~~ 226 (284)
T cd05079 150 IGDFGLTKAIETDKEYYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFL---KMIGPT 226 (284)
T ss_pred ECCCccccccccCccceeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccchhh---hhcccc
Confidence 9999999876543321 111234467789999999888899999999999999999998877532211100 000000
Q ss_pred CCCc-hhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHHh
Q 039533 861 LPDD-VMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHELQSI 931 (949)
Q Consensus 861 ~~~~-~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i 931 (949)
..+. ....++ .+. ...+.+....++..+.+++.+|++.+|++|||++|+++.++++
T Consensus 227 ~~~~~~~~~~~---------~~~------~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~~ 283 (284)
T cd05079 227 HGQMTVTRLVR---------VLE------EGKRLPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEGFEAI 283 (284)
T ss_pred cccccHHHHHH---------HHH------cCccCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHHhh
Confidence 0000 000000 000 0000111123456789999999999999999999999999876
No 166
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=2.9e-35 Score=330.07 Aligned_cols=204 Identities=24% Similarity=0.271 Sum_probs=170.6
Q ss_pred HhcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCC--CcchHHHHHHHHHHHhcCCCcceeEEeeeecccc-cCC
Q 039533 624 ATSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQH--HGASRSFIAECKALKSIRHRNLVKVLTACLGADY-RGN 700 (949)
Q Consensus 624 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~-~~~ 700 (949)
..++|++.+.||+|+||.||+|++..+++.||+|++.... ......+.+|+.+++.++||||+++++++..... ...
T Consensus 19 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 98 (359)
T cd07876 19 VLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEF 98 (359)
T ss_pred hhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCcccc
Confidence 4578999999999999999999998889999999986432 2334678899999999999999999998764331 122
Q ss_pred ccceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCce
Q 039533 701 DFKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTA 780 (949)
Q Consensus 701 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~ 780 (949)
...++||||+++ ++.+.+. ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+
T Consensus 99 ~~~~lv~e~~~~-~l~~~~~------------~~~~~~~~~~~~~qi~~~L~~LH~~---~ivHrDlkp~NIl~~~~~~~ 162 (359)
T cd07876 99 QDVYLVMELMDA-NLCQVIH------------MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTL 162 (359)
T ss_pred ceeEEEEeCCCc-CHHHHHh------------ccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCE
Confidence 357999999975 5666654 2377888999999999999999977 99999999999999999999
Q ss_pred EEeecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccc
Q 039533 781 RVGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIM 846 (949)
Q Consensus 781 kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~ 846 (949)
||+|||+++........ ....||..|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 163 kl~Dfg~a~~~~~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~ 225 (359)
T cd07876 163 KILDFGLARTACTNFMM---TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGT 225 (359)
T ss_pred EEecCCCccccccCccC---CCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCC
Confidence 99999999764332221 1345899999999999999999999999999999999999999643
No 167
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=1.2e-35 Score=329.49 Aligned_cols=252 Identities=21% Similarity=0.246 Sum_probs=192.6
Q ss_pred CCCCCCeeeeecCceEEEEEEc---CCCEEEEEEEEecCC----CcchHHHHHHHHHHHhc-CCCcceeEEeeeeccccc
Q 039533 627 GFSSANLVGVGSFGSVYKGIID---EGRTTIAVKVFNLQH----HGASRSFIAECKALKSI-RHRNLVKVLTACLGADYR 698 (949)
Q Consensus 627 ~y~~~~~lg~G~~g~Vy~~~~~---~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~ 698 (949)
+|++.+.||+|+||.||+|+.. .+++.||+|+++... ....+.+..|+.+++++ +||+|+++++++...+
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~-- 78 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEA-- 78 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCC--
Confidence 5888999999999999999874 367899999996422 22345678899999999 5999999998865443
Q ss_pred CCccceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCC
Q 039533 699 GNDFKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYM 778 (949)
Q Consensus 699 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~ 778 (949)
..++||||+++|+|.+++. ....+++.++..++.|++.||+|||+. +|+||||||+|||++.++
T Consensus 79 ---~~~lv~e~~~~g~L~~~l~----------~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivHrDlkp~Nili~~~~ 142 (332)
T cd05614 79 ---KLHLILDYVSGGEMFTHLY----------QRDNFSEDEVRFYSGEIILALEHLHKL---GIVYRDIKLENILLDSEG 142 (332)
T ss_pred ---EEEEEEeCCCCCcHHHHHH----------HcCCCCHHHHHHHHHHHHHHHHHHHHC---CcEecCCCHHHeEECCCC
Confidence 7899999999999999986 234588999999999999999999977 899999999999999999
Q ss_pred ceEEeecccceecCCCCCccccccccCccCccCccccCCC-ccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhc
Q 039533 779 TARVGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGC-EVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFG 857 (949)
Q Consensus 779 ~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~ 857 (949)
.+||+|||+++......... .....||..|+|||++.+. .++.++|||||||++|||+||+.||........ .....
T Consensus 143 ~~kl~DfG~~~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~-~~~~~ 220 (332)
T cd05614 143 HVVLTDFGLSKEFLSEEKER-TYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNT-QSEVS 220 (332)
T ss_pred CEEEeeCcCCccccccCCCc-cccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCC-HHHHH
Confidence 99999999998654332211 1234699999999998865 478999999999999999999999963211110 00000
Q ss_pred cccCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCC-----CHHHHHH
Q 039533 858 RKALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRT-----NMTNVVH 926 (949)
Q Consensus 858 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----s~~ev~~ 926 (949)
..... .++.. ....+..+.+++.+|++.||++|| +++|+++
T Consensus 221 ~~~~~------~~~~~----------------------~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~ 266 (332)
T cd05614 221 RRILK------CDPPF----------------------PSFIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKE 266 (332)
T ss_pred HHHhc------CCCCC----------------------CCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHc
Confidence 00000 00000 012244578899999999999999 6667764
No 168
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=100.00 E-value=5.6e-35 Score=313.22 Aligned_cols=253 Identities=21% Similarity=0.284 Sum_probs=199.5
Q ss_pred cCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCC-----cchHHHHHHHHHHHhcCCCcceeEEeeeecccccCC
Q 039533 626 SGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHH-----GASRSFIAECKALKSIRHRNLVKVLTACLGADYRGN 700 (949)
Q Consensus 626 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-----~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 700 (949)
++|.+.+.||+|++|.||+|....+++.||+|++..... ...+.+.+|++++++++||||+++++++...+
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~---- 77 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDE---- 77 (263)
T ss_pred CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCC----
Confidence 579999999999999999999988899999999864322 12356888999999999999999999976544
Q ss_pred ccceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCce
Q 039533 701 DFKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTA 780 (949)
Q Consensus 701 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~ 780 (949)
..++||||+++++|.+++.. ...+++..+..++.|++.|++|||+. +|+||||+|+||++++++.+
T Consensus 78 -~~~~v~e~~~~~~l~~~~~~----------~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nilv~~~~~~ 143 (263)
T cd06625 78 -TLSIFMEYMPGGSVKDQLKA----------YGALTETVTRKYTRQILEGVEYLHSN---MIVHRDIKGANILRDSAGNV 143 (263)
T ss_pred -eEEEEEEECCCCcHHHHHHH----------hCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCE
Confidence 89999999999999999862 24578889999999999999999977 99999999999999999999
Q ss_pred EEeecccceecCCCCCccc-cccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhccc
Q 039533 781 RVGDFGLARILSPDHTQTS-SFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRK 859 (949)
Q Consensus 781 kl~DfG~a~~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~ 859 (949)
+|+|||.++.......... .....|+..|+|||+..+..++.++||||+|+++|||++|+.||....... ...
T Consensus 144 ~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~-~~~----- 217 (263)
T cd06625 144 KLGDFGASKRLQTICSSGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEAMA-AIF----- 217 (263)
T ss_pred EEeecccceeccccccccccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccchHH-HHH-----
Confidence 9999999986543222111 113457889999999999889999999999999999999999985321110 000
Q ss_pred cCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHH
Q 039533 860 ALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHE 927 (949)
Q Consensus 860 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 927 (949)
......... .........+.+++.+|+..+|++|||+.|+++.
T Consensus 218 -------~~~~~~~~~------------------~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 260 (263)
T cd06625 218 -------KIATQPTNP------------------QLPSHVSPDARNFLRRTFVENAKKRPSAEELLRH 260 (263)
T ss_pred -------HHhccCCCC------------------CCCccCCHHHHHHHHHHhhcCcccCCCHHHHhhC
Confidence 000000000 0001234567889999999999999999999863
No 169
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=100.00 E-value=1.4e-35 Score=332.74 Aligned_cols=208 Identities=22% Similarity=0.299 Sum_probs=175.8
Q ss_pred HHHHHHHhcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCC---CcchHHHHHHHHHHHhcCCCcceeEEeeeec
Q 039533 618 YQDLYNATSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQH---HGASRSFIAECKALKSIRHRNLVKVLTACLG 694 (949)
Q Consensus 618 ~~~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~ 694 (949)
..++....++|++.+.||+|+||.||+|++..+++.||+|++.... ....+.+.+|+.+++.++||||+++++++..
T Consensus 35 ~~~~~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~ 114 (371)
T cd05622 35 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQD 114 (371)
T ss_pred HhhcCcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEc
Confidence 3445566689999999999999999999999999999999986422 2233567889999999999999999998764
Q ss_pred ccccCCccceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeee
Q 039533 695 ADYRGNDFKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLL 774 (949)
Q Consensus 695 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll 774 (949)
.. ..++||||+++|+|.+++.. ..++...+..++.|++.||+|||++ +|+||||||+||++
T Consensus 115 ~~-----~~~lv~Ey~~gg~L~~~~~~-----------~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NIll 175 (371)
T cd05622 115 DR-----YLYMVMEYMPGGDLVNLMSN-----------YDVPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLL 175 (371)
T ss_pred CC-----EEEEEEcCCCCCcHHHHHHh-----------cCCCHHHHHHHHHHHHHHHHHHHHC---CEEeCCCCHHHEEE
Confidence 44 78999999999999999862 3478888999999999999999977 99999999999999
Q ss_pred cCCCceEEeecccceecCCCCCccccccccCccCccCccccCCC----ccCCccchHHHHHHHHHHHhCCCCCcc
Q 039533 775 DDYMTARVGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGC----EVSTNGDVYSYGILLLELVIGKKPIDI 845 (949)
Q Consensus 775 ~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----~~~~~sDiwSlGvvl~elltg~~Pf~~ 845 (949)
+.++.+||+|||+++......... .....||+.|+|||++.+. .++.++|||||||++|||++|+.||..
T Consensus 176 ~~~~~ikL~DfG~a~~~~~~~~~~-~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~ 249 (371)
T cd05622 176 DKSGHLKLADFGTCMKMNKEGMVR-CDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYA 249 (371)
T ss_pred CCCCCEEEEeCCceeEcCcCCccc-ccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCC
Confidence 999999999999998765432211 1235699999999998754 378999999999999999999999963
No 170
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=100.00 E-value=2.6e-35 Score=317.52 Aligned_cols=259 Identities=23% Similarity=0.306 Sum_probs=201.2
Q ss_pred HHhcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCCcchHHHHHHHHHHHhc-CCCcceeEEeeeecccccC-C
Q 039533 623 NATSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHGASRSFIAECKALKSI-RHRNLVKVLTACLGADYRG-N 700 (949)
Q Consensus 623 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~-~ 700 (949)
.+++.|++.+.||+|+||.||+|....+++.||+|++.... .....+.+|+.+++++ +|+||+++++++...+..+ .
T Consensus 3 ~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~ 81 (272)
T cd06637 3 DPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMD 81 (272)
T ss_pred ChhhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCC-ccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCC
Confidence 45678999999999999999999999889999999987543 3346788999999998 6999999999987544222 3
Q ss_pred ccceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCce
Q 039533 701 DFKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTA 780 (949)
Q Consensus 701 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~ 780 (949)
...++||||+.+++|.+++... ....+++..+..++.|++.|++|||++ +|+||||||+||++++++.+
T Consensus 82 ~~~~iv~e~~~~~~L~~~l~~~--------~~~~l~~~~~~~~~~qi~~~l~~LH~~---~ivh~dl~~~nili~~~~~~ 150 (272)
T cd06637 82 DQLWLVMEFCGAGSVTDLIKNT--------KGNTLKEEWIAYICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEV 150 (272)
T ss_pred cEEEEEEEcCCCCcHHHHHHhc--------cCCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHEEECCCCCE
Confidence 4678999999999999998631 124588999999999999999999987 89999999999999999999
Q ss_pred EEeecccceecCCCCCccccccccCccCccCccccC-----CCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhh
Q 039533 781 RVGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGV-----GCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHN 855 (949)
Q Consensus 781 kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~ 855 (949)
+|+|||++......... .....|+..|+|||++. +..++.++|||||||++|||++|+.||...........
T Consensus 151 ~l~Dfg~~~~~~~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~~~~~- 227 (272)
T cd06637 151 KLVDFGVSAQLDRTVGR--RNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFL- 227 (272)
T ss_pred EEccCCCceeccccccc--CCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHHHHHHH-
Confidence 99999999865432221 12345899999999876 34578899999999999999999999853321110000
Q ss_pred hccccCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 039533 856 FGRKALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVH 926 (949)
Q Consensus 856 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 926 (949)
.... ...... ....+..+.+++.+|+..+|.+|||+.|+++
T Consensus 228 -----~~~~----~~~~~~---------------------~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 268 (272)
T cd06637 228 -----IPRN----PAPRLK---------------------SKKWSKKFQSFIESCLVKNHSQRPTTEQLMK 268 (272)
T ss_pred -----HhcC----CCCCCC---------------------CCCcCHHHHHHHHHHcCCChhhCCCHHHHhh
Confidence 0000 000000 0022345789999999999999999999875
No 171
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=100.00 E-value=4.6e-35 Score=312.41 Aligned_cols=249 Identities=25% Similarity=0.399 Sum_probs=193.3
Q ss_pred eeeeecCceEEEEEEc--CCCEEEEEEEEecCCC-cchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCccceeEeee
Q 039533 633 LVGVGSFGSVYKGIID--EGRTTIAVKVFNLQHH-GASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFKASVYEF 709 (949)
Q Consensus 633 ~lg~G~~g~Vy~~~~~--~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~ 709 (949)
.||+|+||.||+|.+. .++..||+|+...... ...+.+.+|+.++++++||||+++++++.. +..++||||
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~------~~~~lv~e~ 75 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCEA------EALMLVMEM 75 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEcC------CCeEEEEEe
Confidence 3899999999999875 3456799999875433 234568899999999999999999998642 257999999
Q ss_pred ccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEeecccce
Q 039533 710 MHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVGDFGLAR 789 (949)
Q Consensus 710 ~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~DfG~a~ 789 (949)
+++++|.+++.. ....+++.+++.++.|++.||+|||++ +++||||||+||+++.++.+||+|||.++
T Consensus 76 ~~~~~L~~~l~~---------~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~dfg~~~ 143 (257)
T cd05115 76 ASGGPLNKFLSG---------KKDEITVSNVVELMHQVSMGMKYLEGK---NFVHRDLAARNVLLVNQHYAKISDFGLSK 143 (257)
T ss_pred CCCCCHHHHHHh---------CCCCCCHHHHHHHHHHHHHHHHHHHhc---CeeecccchheEEEcCCCcEEeccCCccc
Confidence 999999999862 234589999999999999999999977 89999999999999999999999999998
Q ss_pred ecCCCCCcc-ccccccCccCccCccccCCCccCCccchHHHHHHHHHHHh-CCCCCccccccCchhhhhccccCCCchhh
Q 039533 790 ILSPDHTQT-SSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVI-GKKPIDIMFEGDINLHNFGRKALPDDVMD 867 (949)
Q Consensus 790 ~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~ 867 (949)
......... ......++..|+|||++.+..++.++|||||||++||+++ |+.||....... +..
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~--------------~~~ 209 (257)
T cd05115 144 ALGADDSYYKARSAGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGPE--------------VMS 209 (257)
T ss_pred cccCCccceeccCCCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHHH--------------HHH
Confidence 654433211 1111224578999999988889999999999999999996 999986432111 011
Q ss_pred hcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHHh
Q 039533 868 IVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHELQSI 931 (949)
Q Consensus 868 ~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i 931 (949)
.+........ ...++.++.+++.+||..+|++||++.+|.+.|+.+
T Consensus 210 ~~~~~~~~~~------------------~~~~~~~l~~li~~c~~~~~~~Rp~~~~i~~~l~~~ 255 (257)
T cd05115 210 FIEQGKRLDC------------------PAECPPEMYALMKDCWIYKWEDRPNFAKVEERMRTY 255 (257)
T ss_pred HHHCCCCCCC------------------CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHhhh
Confidence 1111100000 013356788999999999999999999999999865
No 172
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.8e-36 Score=320.91 Aligned_cols=256 Identities=26% Similarity=0.426 Sum_probs=211.3
Q ss_pred CCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCCcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCccceeE
Q 039533 627 GFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFKASV 706 (949)
Q Consensus 627 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv 706 (949)
+....++||.|.||.||.|.|+.-...||||.++.. ....++|..|+.+|+.++|||+|+++|+|.... .+|||
T Consensus 268 dItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKED-tMeveEFLkEAAvMKeikHpNLVqLLGVCT~Ep-----PFYIi 341 (1157)
T KOG4278|consen 268 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTHEP-----PFYII 341 (1157)
T ss_pred heeeeeccCCCcccceeeeeeeccceeeehhhhhhc-chhHHHHHHHHHHHHhhcCccHHHHhhhhccCC-----CeEEE
Confidence 445678999999999999999988889999998643 344688999999999999999999999997544 68999
Q ss_pred eeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEeecc
Q 039533 707 YEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVGDFG 786 (949)
Q Consensus 707 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~DfG 786 (949)
+|||.+|+|.+|+..+. ...++....+.+|.||+.|++||..+ .+|||||..+|.|+.++..+|++|||
T Consensus 342 TEfM~yGNLLdYLRecn--------r~ev~avvLlyMAtQIsSaMeYLEkk---nFIHRDLAARNCLVgEnhiVKvADFG 410 (1157)
T KOG4278|consen 342 TEFMCYGNLLDYLRECN--------RSEVPAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHIVKVADFG 410 (1157)
T ss_pred EecccCccHHHHHHHhc--------hhhcchhHHHHHHHHHHHHHHHHHHh---hhhhhhhhhhhccccccceEEeeccc
Confidence 99999999999998432 23467777889999999999999977 89999999999999999999999999
Q ss_pred cceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHh-CCCCCccccccCchhhhhccccCCCch
Q 039533 787 LARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVI-GKKPIDIMFEGDINLHNFGRKALPDDV 865 (949)
Q Consensus 787 ~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~ 865 (949)
+++.+..+.. +......-..-|.|||-+....++.|+|||+|||+|||+.| |-.||...... .+
T Consensus 411 LsRlMtgDTY-TAHAGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGidlS--------------qV 475 (1157)
T KOG4278|consen 411 LSRLMTGDTY-TAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS--------------QV 475 (1157)
T ss_pred hhhhhcCCce-ecccCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCccHH--------------HH
Confidence 9998865432 22222334567999999999999999999999999999998 88888643111 11
Q ss_pred hhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHHhH
Q 039533 866 MDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHELQSIK 932 (949)
Q Consensus 866 ~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~ 932 (949)
.++++. ..|.+.++.|++.++++++.||++.|.+||+++|+.+.++.+-
T Consensus 476 Y~LLEk------------------gyRM~~PeGCPpkVYeLMraCW~WsPsDRPsFaeiHqafEtmf 524 (1157)
T KOG4278|consen 476 YGLLEK------------------GYRMDGPEGCPPKVYELMRACWNWSPSDRPSFAEIHQAFETMF 524 (1157)
T ss_pred HHHHhc------------------cccccCCCCCCHHHHHHHHHHhcCCcccCccHHHHHHHHHHHh
Confidence 222221 2233344589999999999999999999999999999998764
No 173
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=100.00 E-value=3.4e-35 Score=317.01 Aligned_cols=247 Identities=22% Similarity=0.267 Sum_probs=190.4
Q ss_pred eeeecCceEEEEEEcCCCEEEEEEEEecCC---CcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCccceeEeeec
Q 039533 634 VGVGSFGSVYKGIIDEGRTTIAVKVFNLQH---HGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFKASVYEFM 710 (949)
Q Consensus 634 lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~ 710 (949)
||+|+||.||+++...+++.||+|++.... ....+.+..|++++++++||||+++++++... ...++||||+
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~-----~~~~lv~e~~ 75 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESK-----THLCLVMSLM 75 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecC-----CeEEEEEecC
Confidence 699999999999999889999999986422 12234566799999999999999999886543 3789999999
Q ss_pred cCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEeeccccee
Q 039533 711 HYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVGDFGLARI 790 (949)
Q Consensus 711 ~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~DfG~a~~ 790 (949)
++++|.+++... ....+++..+..++.|++.||+|||+. +|+||||||+||++++++.++|+|||++..
T Consensus 76 ~g~~L~~~~~~~--------~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dikp~Nili~~~~~~~l~Dfg~~~~ 144 (277)
T cd05607 76 NGGDLKYHIYNV--------GERGLEMERVIHYSAQITCGILHLHSM---DIVYRDMKPENVLLDDQGNCRLSDLGLAVE 144 (277)
T ss_pred CCCCHHHHHHhc--------cccCCCHHHHHHHHHHHHHHHHHHHHC---CEEEccCChHhEEEcCCCCEEEeeceeeee
Confidence 999999888521 223478899999999999999999977 999999999999999999999999999987
Q ss_pred cCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhccccCCCchhhhcc
Q 039533 791 LSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKALPDDVMDIVD 870 (949)
Q Consensus 791 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~d 870 (949)
....... ....|+..|+|||++.+..++.++||||+||++|||++|+.||....... ......+. ...
T Consensus 145 ~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~-~~~~~~~~--------~~~ 212 (277)
T cd05607 145 LKDGKTI---TQRAGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKV-AKEELKRR--------TLE 212 (277)
T ss_pred cCCCcee---eccCCCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchh-hHHHHHHH--------hhc
Confidence 6543221 13458999999999998889999999999999999999999986321110 00000000 000
Q ss_pred cCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHH
Q 039533 871 SSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHE 927 (949)
Q Consensus 871 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 927 (949)
...... ....+.++.+++.+|++.||++||+++|+++.
T Consensus 213 ~~~~~~-------------------~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~ 250 (277)
T cd05607 213 DEVKFE-------------------HQNFTEESKDICRLFLAKKPEDRLGSREKNDD 250 (277)
T ss_pred cccccc-------------------cccCCHHHHHHHHHHhccCHhhCCCCccchhh
Confidence 000000 01234457899999999999999999776643
No 174
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=4e-35 Score=322.69 Aligned_cols=273 Identities=21% Similarity=0.334 Sum_probs=205.7
Q ss_pred hcCCCCCCeeeeecCceEEEEEEc-------CCCEEEEEEEEecCCC-cchHHHHHHHHHHHhc-CCCcceeEEeeeecc
Q 039533 625 TSGFSSANLVGVGSFGSVYKGIID-------EGRTTIAVKVFNLQHH-GASRSFIAECKALKSI-RHRNLVKVLTACLGA 695 (949)
Q Consensus 625 ~~~y~~~~~lg~G~~g~Vy~~~~~-------~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~ 695 (949)
.++|.+.+.||+|+||.||+|+.. .....||+|+++.... .....+.+|+.+++++ +||||+++++++...
T Consensus 11 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~ 90 (314)
T cd05099 11 RDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVCTQE 90 (314)
T ss_pred HHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEEccC
Confidence 357889999999999999999863 2346799999874332 2345688999999999 699999999997644
Q ss_pred cccCCccceeEeeeccCCChhhhcCCCCCCCc------cccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCC
Q 039533 696 DYRGNDFKASVYEFMHYGSLEEWLHPFTGEDE------IDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKP 769 (949)
Q Consensus 696 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~------~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp 769 (949)
. ..++||||+++|+|.+++........ .......+++.++..++.|++.||+|||++ +++||||||
T Consensus 91 ~-----~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---gi~H~dlkp 162 (314)
T cd05099 91 G-----PLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESR---RCIHRDLAA 162 (314)
T ss_pred C-----ceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHC---Ceeeccccc
Confidence 3 68999999999999999974321100 011234689999999999999999999977 999999999
Q ss_pred CCeeecCCCceEEeecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHh-CCCCCccccc
Q 039533 770 SNVLLDDYMTARVGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVI-GKKPIDIMFE 848 (949)
Q Consensus 770 ~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~ellt-g~~Pf~~~~~ 848 (949)
+||++++++.+||+|||.++...............++..|+|||++.+..++.++|||||||++|||++ |..||.....
T Consensus 163 ~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~ 242 (314)
T cd05099 163 RNVLVTEDNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPV 242 (314)
T ss_pred eeEEEcCCCcEEEccccccccccccccccccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCCCH
Confidence 999999999999999999986643322111112224567999999988889999999999999999999 8888853211
Q ss_pred cCchhhhhccccCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHH
Q 039533 849 GDINLHNFGRKALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHEL 928 (949)
Q Consensus 849 ~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L 928 (949)
. .. .+.+...... +....++..+.+++.+|+..+|++|||+.|+++.|
T Consensus 243 ~--~~------------~~~~~~~~~~------------------~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l 290 (314)
T cd05099 243 E--EL------------FKLLREGHRM------------------DKPSNCTHELYMLMRECWHAVPTQRPTFKQLVEAL 290 (314)
T ss_pred H--HH------------HHHHHcCCCC------------------CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHH
Confidence 1 00 0000000000 00012345678999999999999999999999999
Q ss_pred HHhHHhhcc
Q 039533 929 QSIKNILLG 937 (949)
Q Consensus 929 ~~i~~~~~~ 937 (949)
+++......
T Consensus 291 ~~~~~~~~~ 299 (314)
T cd05099 291 DKVLAAVSE 299 (314)
T ss_pred HHHHHHhcC
Confidence 999865443
No 175
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=100.00 E-value=2.4e-35 Score=317.11 Aligned_cols=257 Identities=23% Similarity=0.404 Sum_probs=200.1
Q ss_pred cCCCCCCeeeeecCceEEEEEEcCCCE---EEEEEEEecCC-CcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCc
Q 039533 626 SGFSSANLVGVGSFGSVYKGIIDEGRT---TIAVKVFNLQH-HGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGND 701 (949)
Q Consensus 626 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~---~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 701 (949)
++|++.+.||+|+||.||+|....+++ .||||+++... .....++..|+.++++++||||+++++++...+
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~----- 78 (269)
T cd05065 4 SCVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSR----- 78 (269)
T ss_pred HHeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCC-----
Confidence 457889999999999999999875554 69999987542 233468999999999999999999999875443
Q ss_pred cceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceE
Q 039533 702 FKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTAR 781 (949)
Q Consensus 702 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~k 781 (949)
..++||||+++++|.+++.. ....+++.+++.++.|++.|++|||++ +++||||||+||+++.++.+|
T Consensus 79 ~~~lv~e~~~~~~L~~~l~~---------~~~~~~~~~~~~i~~~l~~al~~lH~~---g~~H~dl~p~nili~~~~~~k 146 (269)
T cd05065 79 PVMIITEFMENGALDSFLRQ---------NDGQFTVIQLVGMLRGIAAGMKYLSEM---NYVHRDLAARNILVNSNLVCK 146 (269)
T ss_pred ceEEEEecCCCCcHHHHHhh---------CCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccChheEEEcCCCcEE
Confidence 78999999999999999862 234588999999999999999999977 999999999999999999999
Q ss_pred EeecccceecCCCCCcccccc-cc--CccCccCccccCCCccCCccchHHHHHHHHHHHh-CCCCCccccccCchhhhhc
Q 039533 782 VGDFGLARILSPDHTQTSSFS-VK--GSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVI-GKKPIDIMFEGDINLHNFG 857 (949)
Q Consensus 782 l~DfG~a~~~~~~~~~~~~~~-~~--gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~ellt-g~~Pf~~~~~~~~~~~~~~ 857 (949)
|+|||.+.............. .. .+..|+|||++.+..++.++|||||||++||+++ |..||...... ......
T Consensus 147 l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~--~~~~~i 224 (269)
T cd05065 147 VSDFGLSRFLEDDTSDPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQ--DVINAI 224 (269)
T ss_pred ECCCccccccccCccccccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCHH--HHHHHH
Confidence 999999876644322111111 11 2457999999998899999999999999999987 99998533111 111110
Q ss_pred cccCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHHh
Q 039533 858 RKALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHELQSI 931 (949)
Q Consensus 858 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i 931 (949)
. ... +.+...+++..+.+++.+|++.+|++||++.+|+..|+++
T Consensus 225 ~------------~~~------------------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 268 (269)
T cd05065 225 E------------QDY------------------RLPPPMDCPTALHQLMLDCWQKDRNARPKFGQIVSTLDKM 268 (269)
T ss_pred H------------cCC------------------cCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 0 000 0000113455678999999999999999999999998875
No 176
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=100.00 E-value=9.8e-36 Score=328.67 Aligned_cols=238 Identities=25% Similarity=0.260 Sum_probs=185.1
Q ss_pred CeeeeecCceEEEEEEcCCCEEEEEEEEecCC---CcchHHHHHHHH-HHHhcCCCcceeEEeeeecccccCCccceeEe
Q 039533 632 NLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQH---HGASRSFIAECK-ALKSIRHRNLVKVLTACLGADYRGNDFKASVY 707 (949)
Q Consensus 632 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~-~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~ 707 (949)
+.||+|+||+||+|++..+++.||+|++.... ....+.+..|.. +++.++||||+++++++...+ ..++||
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~-----~~~lv~ 75 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTAD-----KLYFVL 75 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCC-----EEEEEE
Confidence 47999999999999999899999999997432 122344555554 567789999999998875444 789999
Q ss_pred eeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEeeccc
Q 039533 708 EFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVGDFGL 787 (949)
Q Consensus 708 e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~DfG~ 787 (949)
||+++|+|.+++. ....+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+
T Consensus 76 e~~~~g~L~~~l~----------~~~~~~~~~~~~~~~qi~~~l~~lH~~---givH~dikp~NIll~~~~~~kl~Dfg~ 142 (323)
T cd05575 76 DYVNGGELFFHLQ----------RERSFPEPRARFYAAEIASALGYLHSL---NIIYRDLKPENILLDSQGHVVLTDFGL 142 (323)
T ss_pred cCCCCCCHHHHHH----------hcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHeEECCCCcEEEeccCC
Confidence 9999999999986 234588899999999999999999977 999999999999999999999999999
Q ss_pred ceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhccccCCCchhh
Q 039533 788 ARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKALPDDVMD 867 (949)
Q Consensus 788 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~ 867 (949)
++........ .....||+.|+|||++.+..++.++|||||||++|||++|+.||...... ... ..
T Consensus 143 ~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~-----~~~--------~~ 207 (323)
T cd05575 143 CKEGIEHSKT--TSTFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDTA-----EMY--------DN 207 (323)
T ss_pred CcccccCCCc--cccccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCCHH-----HHH--------HH
Confidence 8754322211 12345899999999999989999999999999999999999999632111 000 00
Q ss_pred hcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHH
Q 039533 868 IVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMT 922 (949)
Q Consensus 868 ~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ 922 (949)
+........ ...+..+.+++.+|++.||++||++.
T Consensus 208 i~~~~~~~~--------------------~~~~~~~~~li~~~l~~~p~~R~~~~ 242 (323)
T cd05575 208 ILNKPLRLK--------------------PNISVSARHLLEGLLQKDRTKRLGAK 242 (323)
T ss_pred HHcCCCCCC--------------------CCCCHHHHHHHHHHhhcCHHhCCCCC
Confidence 111000000 01244578899999999999999985
No 177
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=100.00 E-value=6e-35 Score=312.34 Aligned_cols=253 Identities=27% Similarity=0.453 Sum_probs=199.3
Q ss_pred cCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCCcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCcccee
Q 039533 626 SGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFKAS 705 (949)
Q Consensus 626 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 705 (949)
++|++.+.||+|+||.||+|... ++..||+|.++.... ..+.+.+|+.++++++|++++++++++.. ...++
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~-~~~~~~~k~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~~~~~~~------~~~~l 77 (260)
T cd05070 6 ESLQLIKKLGNGQFGEVWMGTWN-GNTKVAVKTLKPGTM-SPESFLEEAQIMKKLRHDKLVQLYAVVSE------EPIYI 77 (260)
T ss_pred HHhhhhheeccccCceEEEEEec-CCceeEEEEecCCCC-CHHHHHHHHHHHHhcCCCceEEEEeEECC------CCcEE
Confidence 57899999999999999999887 567799999875433 34678999999999999999999988632 24789
Q ss_pred EeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEeec
Q 039533 706 VYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVGDF 785 (949)
Q Consensus 706 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~Df 785 (949)
||||+++++|.++++.. ....+++.++..++.|++.||+|||+. +++||||||+||++++++.++|+||
T Consensus 78 v~e~~~~~~L~~~~~~~--------~~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~di~p~Nili~~~~~~~l~df 146 (260)
T cd05070 78 VTEYMSKGSLLDFLKDG--------EGRALKLPNLVDMAAQVAAGMAYIERM---NYIHRDLRSANILVGDGLVCKIADF 146 (260)
T ss_pred EEEecCCCcHHHHHHhc--------CCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCccceEEEeCCceEEeCCc
Confidence 99999999999998621 234588999999999999999999977 8999999999999999999999999
Q ss_pred ccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHh-CCCCCccccccCchhhhhccccCCCc
Q 039533 786 GLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVI-GKKPIDIMFEGDINLHNFGRKALPDD 864 (949)
Q Consensus 786 G~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~ 864 (949)
|.+.......... .....++..|+|||+..+..++.++||||||+++|||++ |..||...... ..
T Consensus 147 g~~~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~--~~----------- 212 (260)
T cd05070 147 GLARLIEDNEYTA-RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNR--EV----------- 212 (260)
T ss_pred eeeeeccCccccc-ccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCHH--HH-----------
Confidence 9998765433211 112335678999999988889999999999999999999 89998532111 00
Q ss_pred hhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHH
Q 039533 865 VMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHELQS 930 (949)
Q Consensus 865 ~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~ 930 (949)
.+.+...... +.....+..+.+++.+|++.+|++|||++++.+.|++
T Consensus 213 -~~~~~~~~~~------------------~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 259 (260)
T cd05070 213 -LEQVERGYRM------------------PCPQDCPISLHELMLQCWKKDPEERPTFEYLQSFLED 259 (260)
T ss_pred -HHHHHcCCCC------------------CCCCcCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 0111100000 0011334568999999999999999999999998875
No 178
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=100.00 E-value=3.9e-35 Score=313.17 Aligned_cols=250 Identities=26% Similarity=0.406 Sum_probs=196.2
Q ss_pred CeeeeecCceEEEEEEcCCC---EEEEEEEEecCCC-cchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCccceeEe
Q 039533 632 NLVGVGSFGSVYKGIIDEGR---TTIAVKVFNLQHH-GASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFKASVY 707 (949)
Q Consensus 632 ~~lg~G~~g~Vy~~~~~~~~---~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~ 707 (949)
++||+|+||.||+|.+...+ ..||+|.++.... ...+++.+|+.++++++|+||+++++++.. ...++||
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~------~~~~~v~ 74 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCKG------EPLMLVM 74 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEcC------CceEEEE
Confidence 47999999999999875444 7899999875443 244678999999999999999999998642 2579999
Q ss_pred eeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEeeccc
Q 039533 708 EFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVGDFGL 787 (949)
Q Consensus 708 e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~DfG~ 787 (949)
||+++++|.+++.. ...+++..+..++.|++.|++|||+. +++||||||+||+++.++.+||+|||.
T Consensus 75 e~~~~~~L~~~l~~----------~~~~~~~~~~~~~~qi~~~l~~lh~~---~i~H~di~p~nili~~~~~~kl~df~~ 141 (257)
T cd05060 75 ELAPLGPLLKYLKK----------RREIPVSDLKELAHQVAMGMAYLESK---HFVHRDLAARNVLLVNRHQAKISDFGM 141 (257)
T ss_pred EeCCCCcHHHHHHh----------CCCCCHHHHHHHHHHHHHHHHHHhhc---CeeccCcccceEEEcCCCcEEeccccc
Confidence 99999999999972 23588999999999999999999977 899999999999999999999999999
Q ss_pred ceecCCCCCcc-ccccccCccCccCccccCCCccCCccchHHHHHHHHHHHh-CCCCCccccccCchhhhhccccCCCch
Q 039533 788 ARILSPDHTQT-SSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVI-GKKPIDIMFEGDINLHNFGRKALPDDV 865 (949)
Q Consensus 788 a~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~ 865 (949)
++......... ......++..|+|||...+..++.++|||||||++|||++ |..||...... ...........
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~--~~~~~~~~~~~--- 216 (257)
T cd05060 142 SRALGAGSDYYRATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGA--EVIAMLESGER--- 216 (257)
T ss_pred cceeecCCcccccccCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCHH--HHHHHHHcCCc---
Confidence 98765443321 1111224568999999988889999999999999999998 99998643211 11111100000
Q ss_pred hhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHHhH
Q 039533 866 MDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHELQSIK 932 (949)
Q Consensus 866 ~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~ 932 (949)
. . ....++..+.+++.+|+..+|++||++.|+++.|+++.
T Consensus 217 ------~--~-------------------~~~~~~~~l~~li~~cl~~~p~~Rp~~~~l~~~l~~~~ 256 (257)
T cd05060 217 ------L--P-------------------RPEECPQEIYSIMLSCWKYRPEDRPTFSELESTFRRDP 256 (257)
T ss_pred ------C--C-------------------CCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhcc
Confidence 0 0 00123456889999999999999999999999998864
No 179
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=100.00 E-value=5e-35 Score=312.30 Aligned_cols=247 Identities=23% Similarity=0.379 Sum_probs=193.2
Q ss_pred eeeeecCceEEEEEE--cCCCEEEEEEEEecCCC--cchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCccceeEee
Q 039533 633 LVGVGSFGSVYKGII--DEGRTTIAVKVFNLQHH--GASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFKASVYE 708 (949)
Q Consensus 633 ~lg~G~~g~Vy~~~~--~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e 708 (949)
.||+|+||.||+|.+ ..++..+|+|+++.... ...+.+.+|+.++++++||||+++++++.. +..++|||
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~------~~~~lv~e 75 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICEA------ESWMLVME 75 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEcC------CCcEEEEe
Confidence 689999999999975 34678899999864432 234678899999999999999999998642 25689999
Q ss_pred eccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEeecccc
Q 039533 709 FMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVGDFGLA 788 (949)
Q Consensus 709 ~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~DfG~a 788 (949)
|+++++|.+++. ....+++..+..++.|++.|++|||++ +|+||||||+||++++++.+||+|||.+
T Consensus 76 ~~~~~~L~~~l~----------~~~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dlkp~nill~~~~~~kl~Dfg~~ 142 (257)
T cd05116 76 LAELGPLNKFLQ----------KNKHVTEKNITELVHQVSMGMKYLEET---NFVHRDLAARNVLLVTQHYAKISDFGLS 142 (257)
T ss_pred cCCCCcHHHHHH----------hcCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccchhhEEEcCCCeEEECCCccc
Confidence 999999999986 224588999999999999999999977 8999999999999999999999999999
Q ss_pred eecCCCCCcc-ccccccCccCccCccccCCCccCCccchHHHHHHHHHHHh-CCCCCccccccCchhhhhccccCCCchh
Q 039533 789 RILSPDHTQT-SSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVI-GKKPIDIMFEGDINLHNFGRKALPDDVM 866 (949)
Q Consensus 789 ~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~ 866 (949)
+......... ......++..|+|||.+....++.++|||||||++|||++ |+.||...... .. .
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~--~~------------~ 208 (257)
T cd05116 143 KALGADENYYKAKTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGN--EV------------T 208 (257)
T ss_pred cccCCCCCeeeecCCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHH--HH------------H
Confidence 8765443211 1112234578999999988889999999999999999998 99998643211 11 1
Q ss_pred hhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHH
Q 039533 867 DIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHELQS 930 (949)
Q Consensus 867 ~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~ 930 (949)
+.++....... ...++..+.+++.+||+.||++||++++|.+.|++
T Consensus 209 ~~i~~~~~~~~------------------~~~~~~~l~~li~~~~~~~p~~Rp~~~~i~~~l~~ 254 (257)
T cd05116 209 QMIESGERMEC------------------PQRCPPEMYDLMKLCWTYGVDERPGFAVVELRLRN 254 (257)
T ss_pred HHHHCCCCCCC------------------CCCCCHHHHHHHHHHhccCchhCcCHHHHHHHHhc
Confidence 11111110000 01234568899999999999999999999999875
No 180
>PTZ00284 protein kinase; Provisional
Probab=100.00 E-value=2.5e-35 Score=341.47 Aligned_cols=204 Identities=23% Similarity=0.302 Sum_probs=165.8
Q ss_pred HHHHHhcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCCcchHHHHHHHHHHHhcCC------CcceeEEeeee
Q 039533 620 DLYNATSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHGASRSFIAECKALKSIRH------RNLVKVLTACL 693 (949)
Q Consensus 620 ~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h------~niv~~~~~~~ 693 (949)
++....++|++.++||+|+||+||+|.+..+++.||||+++... ...+....|+.++++++| .+++++++++.
T Consensus 123 ~~~~~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~ 201 (467)
T PTZ00284 123 DIDVSTQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVP-KYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQ 201 (467)
T ss_pred ccccCCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecch-hhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEE
Confidence 34455788999999999999999999998889999999986432 223456678888777754 45888888875
Q ss_pred cccccCCccceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCee
Q 039533 694 GADYRGNDFKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVL 773 (949)
Q Consensus 694 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIl 773 (949)
.. ..+.++|||++ +++|.+++. ....+++..+..|+.||+.||+|||++. +|+||||||+|||
T Consensus 202 ~~----~~~~~iv~~~~-g~~l~~~l~----------~~~~l~~~~~~~i~~qi~~aL~yLH~~~--gIiHrDlKP~NIL 264 (467)
T PTZ00284 202 NE----TGHMCIVMPKY-GPCLLDWIM----------KHGPFSHRHLAQIIFQTGVALDYFHTEL--HLMHTDLKPENIL 264 (467)
T ss_pred cC----CceEEEEEecc-CCCHHHHHH----------HcCCCCHHHHHHHHHHHHHHHHHHHhcC--CeecCCCCHHHEE
Confidence 32 24689999988 778988886 2345889999999999999999999632 8999999999999
Q ss_pred ecCCC----------------ceEEeecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHH
Q 039533 774 LDDYM----------------TARVGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELV 837 (949)
Q Consensus 774 l~~~~----------------~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~ell 837 (949)
++.++ .+||+|||.+....... ....||..|+|||++.+..++.++|||||||++|||+
T Consensus 265 l~~~~~~~~~~~~~~~~~~~~~vkl~DfG~~~~~~~~~-----~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~ell 339 (467)
T PTZ00284 265 METSDTVVDPVTNRALPPDPCRVRICDLGGCCDERHSR-----TAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELY 339 (467)
T ss_pred EecCCcccccccccccCCCCceEEECCCCccccCcccc-----ccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHH
Confidence 98665 49999999876432221 2356999999999999999999999999999999999
Q ss_pred hCCCCCccc
Q 039533 838 IGKKPIDIM 846 (949)
Q Consensus 838 tg~~Pf~~~ 846 (949)
+|+.||+..
T Consensus 340 tG~~pf~~~ 348 (467)
T PTZ00284 340 TGKLLYDTH 348 (467)
T ss_pred hCCCCCCCC
Confidence 999999643
No 181
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=100.00 E-value=3.4e-35 Score=319.31 Aligned_cols=266 Identities=25% Similarity=0.395 Sum_probs=202.9
Q ss_pred hcCCCCCCeeeeecCceEEEEEEcC-----CCEEEEEEEEecCCC-cchHHHHHHHHHHHhcCCCcceeEEeeeeccccc
Q 039533 625 TSGFSSANLVGVGSFGSVYKGIIDE-----GRTTIAVKVFNLQHH-GASRSFIAECKALKSIRHRNLVKVLTACLGADYR 698 (949)
Q Consensus 625 ~~~y~~~~~lg~G~~g~Vy~~~~~~-----~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 698 (949)
.++|++.+.||+|+||.||+|.+.. ++..||+|+++.... ...+++.+|+.++++++||||+++++++...+
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~-- 81 (288)
T cd05050 4 RNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAVGK-- 81 (288)
T ss_pred hHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEcCCC--
Confidence 4679999999999999999998742 568899999875432 23467889999999999999999999876543
Q ss_pred CCccceeEeeeccCCChhhhcCCCCCCCc------------cccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecC
Q 039533 699 GNDFKASVYEFMHYGSLEEWLHPFTGEDE------------IDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCD 766 (949)
Q Consensus 699 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~------------~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrD 766 (949)
..++||||+++++|.+++........ .......+++.+++.++.|++.||+|||+. +++|||
T Consensus 82 ---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~---~i~H~d 155 (288)
T cd05050 82 ---PMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSER---KFVHRD 155 (288)
T ss_pred ---ccEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC---Ceeccc
Confidence 78999999999999999964321110 111234588999999999999999999977 899999
Q ss_pred CCCCCeeecCCCceEEeecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHh-CCCCCcc
Q 039533 767 LKPSNVLLDDYMTARVGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVI-GKKPIDI 845 (949)
Q Consensus 767 lkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~ellt-g~~Pf~~ 845 (949)
|||+||++++++.++|+|||.+................++..|+|||.+.+..++.++|||||||++|||++ |..||..
T Consensus 156 l~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~ 235 (288)
T cd05050 156 LATRNCLVGENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYG 235 (288)
T ss_pred ccHhheEecCCCceEECccccceecccCccccccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCC
Confidence 999999999999999999999886543322211112235678999999988899999999999999999998 8888753
Q ss_pred ccccCchhhhhccccCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHH
Q 039533 846 MFEGDINLHNFGRKALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVV 925 (949)
Q Consensus 846 ~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~ 925 (949)
....+ .. ..+.+......+ ...+.++.+++.+|++.+|++|||+.|++
T Consensus 236 ~~~~~-----~~--------~~~~~~~~~~~~-------------------~~~~~~l~~li~~~l~~~p~~Rpt~~el~ 283 (288)
T cd05050 236 MAHEE-----VI--------YYVRDGNVLSCP-------------------DNCPLELYNLMRLCWSKLPSDRPSFASIN 283 (288)
T ss_pred CCHHH-----HH--------HHHhcCCCCCCC-------------------CCCCHHHHHHHHHHcccCcccCCCHHHHH
Confidence 21110 00 000000000000 12345688999999999999999999999
Q ss_pred HHHHH
Q 039533 926 HELQS 930 (949)
Q Consensus 926 ~~L~~ 930 (949)
+.|++
T Consensus 284 ~~l~~ 288 (288)
T cd05050 284 RILQR 288 (288)
T ss_pred HHhhC
Confidence 99863
No 182
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=100.00 E-value=1.8e-35 Score=331.33 Aligned_cols=204 Identities=22% Similarity=0.247 Sum_probs=171.4
Q ss_pred HHhcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCC--CcchHHHHHHHHHHHhcCCCcceeEEeeeecccc-cC
Q 039533 623 NATSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQH--HGASRSFIAECKALKSIRHRNLVKVLTACLGADY-RG 699 (949)
Q Consensus 623 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~-~~ 699 (949)
...++|++.+.||+|+||.||+|.+...++.||||++.... ....+.+.+|+.+++.++||||+++++++..... ..
T Consensus 14 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 93 (355)
T cd07874 14 TVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEE 93 (355)
T ss_pred hhhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeeccccccc
Confidence 34578999999999999999999998889999999987432 2334678899999999999999999998764331 22
Q ss_pred CccceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCc
Q 039533 700 NDFKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMT 779 (949)
Q Consensus 700 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~ 779 (949)
....++||||+++ ++.+++. ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.
T Consensus 94 ~~~~~lv~e~~~~-~l~~~~~------------~~l~~~~~~~~~~qi~~aL~~LH~~---givHrDikp~Nill~~~~~ 157 (355)
T cd07874 94 FQDVYLVMELMDA-NLCQVIQ------------MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCT 157 (355)
T ss_pred cceeEEEhhhhcc-cHHHHHh------------hcCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHHEEECCCCC
Confidence 3457999999975 6766664 2378888999999999999999977 9999999999999999999
Q ss_pred eEEeecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCcc
Q 039533 780 ARVGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDI 845 (949)
Q Consensus 780 ~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~ 845 (949)
+||+|||+++........ ....||..|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 158 ~kl~Dfg~~~~~~~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~ 220 (355)
T cd07874 158 LKILDFGLARTAGTSFMM---TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPG 220 (355)
T ss_pred EEEeeCcccccCCCcccc---CCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 999999999865433221 134589999999999998999999999999999999999999964
No 183
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=100.00 E-value=3.9e-35 Score=312.96 Aligned_cols=251 Identities=26% Similarity=0.379 Sum_probs=196.9
Q ss_pred cCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCCcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCcccee
Q 039533 626 SGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFKAS 705 (949)
Q Consensus 626 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 705 (949)
.+|++.+.||+|+||.||+|.+. ++..+|+|++.... .....+.+|++++++++||||+++++++...+ ..++
T Consensus 4 ~~~~~~~~lg~G~~~~v~~~~~~-~~~~~~iK~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~-----~~~l 76 (256)
T cd05059 4 SELTFLKELGSGQFGVVHLGKWR-GKIDVAIKMIREGA-MSEDDFIEEAKVMMKLSHPNLVQLYGVCTKQR-----PIFI 76 (256)
T ss_pred HHcchhhhhccCCCceEEEeEec-CCccEEEEEeccCC-CCHHHHHHHHHHHHhCCCCCEEEEEEEEcCCC-----ceEE
Confidence 35888999999999999999986 56789999986433 23457889999999999999999999875444 7899
Q ss_pred EeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEeec
Q 039533 706 VYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVGDF 785 (949)
Q Consensus 706 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~Df 785 (949)
||||+++++|.+++.. ....+++..++.++.|++.|++|||+. +++||||||+||++++++.+||+||
T Consensus 77 v~e~~~~~~L~~~l~~---------~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~kl~df 144 (256)
T cd05059 77 VTEYMANGCLLNYLRE---------RKGKLGTEWLLDMCSDVCEAMEYLESN---GFIHRDLAARNCLVGEDNVVKVSDF 144 (256)
T ss_pred EEecCCCCCHHHHHHh---------cccCCCHHHHHHHHHHHHHHHHHHHHC---CcccccccHhhEEECCCCcEEECCc
Confidence 9999999999999862 123588999999999999999999977 8999999999999999999999999
Q ss_pred ccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHh-CCCCCccccccCchhhhhccccCCCc
Q 039533 786 GLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVI-GKKPIDIMFEGDINLHNFGRKALPDD 864 (949)
Q Consensus 786 G~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~ 864 (949)
|.++......... .....++..|+|||...+..++.++||||||+++||+++ |+.||+.....+ ...
T Consensus 145 g~~~~~~~~~~~~-~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~--~~~--------- 212 (256)
T cd05059 145 GLARYVLDDQYTS-SQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSE--VVE--------- 212 (256)
T ss_pred ccceecccccccc-cCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHHH--HHH---------
Confidence 9998654332211 111224567999999998899999999999999999999 899986332111 000
Q ss_pred hhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHH
Q 039533 865 VMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHEL 928 (949)
Q Consensus 865 ~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L 928 (949)
.+...... .....++.++.+++.+|++.+|++|||+.|+++.|
T Consensus 213 ---~~~~~~~~------------------~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~~l~~l 255 (256)
T cd05059 213 ---SVSAGYRL------------------YRPKLAPTEVYTIMYSCWHEKPEDRPAFKKLLSQL 255 (256)
T ss_pred ---HHHcCCcC------------------CCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHh
Confidence 00000000 00012355789999999999999999999999886
No 184
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=100.00 E-value=2.9e-35 Score=313.84 Aligned_cols=251 Identities=20% Similarity=0.257 Sum_probs=199.8
Q ss_pred CCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCC-CcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCcccee
Q 039533 627 GFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQH-HGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFKAS 705 (949)
Q Consensus 627 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 705 (949)
+|++.+.||+|+||.||++++..+++.+|+|.++... ....+.+.+|+.++++++|+||+++++++...+ ..++
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-----~~~l 75 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESFEADG-----HLYI 75 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEEEECC-----EEEE
Confidence 5788899999999999999999899999999986432 334567889999999999999999999875444 7899
Q ss_pred EeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEeec
Q 039533 706 VYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVGDF 785 (949)
Q Consensus 706 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~Df 785 (949)
||||+++++|.+++... ....++...+..++.|++.||.|||++ +|+|+||||+||++++++.++++||
T Consensus 76 v~e~~~~~~l~~~~~~~--------~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dl~p~nili~~~~~~~l~df 144 (255)
T cd08219 76 VMEYCDGGDLMQKIKLQ--------RGKLFPEDTILQWFVQMCLGVQHIHEK---RVLHRDIKSKNIFLTQNGKVKLGDF 144 (255)
T ss_pred EEeeCCCCcHHHHHHhc--------cCCCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCcceEEECCCCcEEEccc
Confidence 99999999999988621 234578889999999999999999977 9999999999999999999999999
Q ss_pred ccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhccccCCCch
Q 039533 786 GLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKALPDDV 865 (949)
Q Consensus 786 G~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~ 865 (949)
|.+.......... ....|+..|+|||++.+..++.++||||||+++|+|++|+.||....... ..
T Consensus 145 g~~~~~~~~~~~~--~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~-----~~-------- 209 (255)
T cd08219 145 GSARLLTSPGAYA--CTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSWKN-----LI-------- 209 (255)
T ss_pred Ccceeeccccccc--ccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCCHHH-----HH--------
Confidence 9998765432211 13458899999999998889999999999999999999999996321100 00
Q ss_pred hhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHH
Q 039533 866 MDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHE 927 (949)
Q Consensus 866 ~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 927 (949)
..+......+.+ ...+..+.+++.+||+.||++||++.|++.+
T Consensus 210 ~~~~~~~~~~~~-------------------~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 252 (255)
T cd08219 210 LKVCQGSYKPLP-------------------SHYSYELRSLIKQMFKRNPRSRPSATTILSR 252 (255)
T ss_pred HHHhcCCCCCCC-------------------cccCHHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence 000000000000 1233457889999999999999999999865
No 185
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=100.00 E-value=7.5e-35 Score=314.93 Aligned_cols=251 Identities=24% Similarity=0.326 Sum_probs=196.3
Q ss_pred cCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCC-CcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCccce
Q 039533 626 SGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQH-HGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFKA 704 (949)
Q Consensus 626 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 704 (949)
++|++.++||+|+||.||+|.+..+++.||+|++.... ....+.+.+|++++++++||||+++++++...+ ..+
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-----~~~ 75 (279)
T cd06619 1 QDIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFVEN-----RIS 75 (279)
T ss_pred CcchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECC-----EEE
Confidence 36888999999999999999998889999999986542 223457889999999999999999999986544 688
Q ss_pred eEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEee
Q 039533 705 SVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVGD 784 (949)
Q Consensus 705 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~D 784 (949)
+||||+++++|..+.. +++..+..++.|++.|++|||+. +|+||||||+||+++.++.++|+|
T Consensus 76 lv~e~~~~~~l~~~~~--------------~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nill~~~~~~~l~d 138 (279)
T cd06619 76 ICTEFMDGGSLDVYRK--------------IPEHVLGRIAVAVVKGLTYLWSL---KILHRDVKPSNMLVNTRGQVKLCD 138 (279)
T ss_pred EEEecCCCCChHHhhc--------------CCHHHHHHHHHHHHHHHHHHHHC---CEeeCCCCHHHEEECCCCCEEEee
Confidence 9999999999976532 67788899999999999999977 999999999999999999999999
Q ss_pred cccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhccccCCCc
Q 039533 785 FGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKALPDD 864 (949)
Q Consensus 785 fG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~ 864 (949)
||++........ ....|+..|+|||++.+..++.++|||||||++|||++|+.||........... ...
T Consensus 139 fg~~~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~-------~~~ 207 (279)
T cd06619 139 FGVSTQLVNSIA----KTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLM-------PLQ 207 (279)
T ss_pred CCcceecccccc----cCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccc-------hHH
Confidence 999986543321 134589999999999988899999999999999999999999964322111000 000
Q ss_pred hhhh-cccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHH
Q 039533 865 VMDI-VDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHE 927 (949)
Q Consensus 865 ~~~~-~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 927 (949)
.... .+......+ ....+..+.+++.+|++.+|++||+++|+++.
T Consensus 208 ~~~~~~~~~~~~~~------------------~~~~~~~~~~li~~~l~~~P~~Rp~~~eil~~ 253 (279)
T cd06619 208 LLQCIVDEDPPVLP------------------VGQFSEKFVHFITQCMRKQPKERPAPENLMDH 253 (279)
T ss_pred HHHHHhccCCCCCC------------------CCcCCHHHHHHHHHHhhCChhhCCCHHHHhcC
Confidence 0000 000000000 01223467899999999999999999999764
No 186
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=100.00 E-value=4.7e-35 Score=314.42 Aligned_cols=257 Identities=23% Similarity=0.393 Sum_probs=200.3
Q ss_pred cCCCCCCeeeeecCceEEEEEEcCC---CEEEEEEEEecCCC-cchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCc
Q 039533 626 SGFSSANLVGVGSFGSVYKGIIDEG---RTTIAVKVFNLQHH-GASRSFIAECKALKSIRHRNLVKVLTACLGADYRGND 701 (949)
Q Consensus 626 ~~y~~~~~lg~G~~g~Vy~~~~~~~---~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 701 (949)
.+|++.+.||+|+||.||+|++..+ +..+|+|.++.... ...+.+.+|+.++++++||||+++++++...+
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~----- 78 (267)
T cd05066 4 SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSK----- 78 (267)
T ss_pred HHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCC-----
Confidence 5788999999999999999987533 34799998864332 23467899999999999999999999975443
Q ss_pred cceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceE
Q 039533 702 FKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTAR 781 (949)
Q Consensus 702 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~k 781 (949)
..++||||+++++|.+++.. ....+++.++..++.|++.|++|||+. +++||||||+||+++.++.++
T Consensus 79 ~~~lv~e~~~~~~L~~~~~~---------~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~h~dlkp~nili~~~~~~~ 146 (267)
T cd05066 79 PVMIVTEYMENGSLDAFLRK---------HDGQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILVNSNLVCK 146 (267)
T ss_pred ccEEEEEcCCCCCHHHHHHh---------cCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeehhhchhcEEECCCCeEE
Confidence 78999999999999999962 224578999999999999999999977 899999999999999999999
Q ss_pred EeecccceecCCCCCcccc-ccccCccCccCccccCCCccCCccchHHHHHHHHHHHh-CCCCCccccccCchhhhhccc
Q 039533 782 VGDFGLARILSPDHTQTSS-FSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVI-GKKPIDIMFEGDINLHNFGRK 859 (949)
Q Consensus 782 l~DfG~a~~~~~~~~~~~~-~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~ellt-g~~Pf~~~~~~~~~~~~~~~~ 859 (949)
++|||.+............ ....++..|+|||++.+..++.++||||||+++||+++ |+.||......+ .....
T Consensus 147 l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~~--~~~~~-- 222 (267)
T cd05066 147 VSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQD--VIKAI-- 222 (267)
T ss_pred eCCCCcccccccccceeeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCHHH--HHHHH--
Confidence 9999999876543321111 11223568999999998889999999999999999887 999985331110 00000
Q ss_pred cCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHHh
Q 039533 860 ALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHELQSI 931 (949)
Q Consensus 860 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i 931 (949)
.+. .. .+....++..+.+++.+|++.+|++||+|.++++.|+++
T Consensus 223 ---------~~~-~~------------------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 266 (267)
T cd05066 223 ---------EEG-YR------------------LPAPMDCPAALHQLMLDCWQKDRNERPKFEQIVSILDKL 266 (267)
T ss_pred ---------hCC-Cc------------------CCCCCCCCHHHHHHHHHHcccCchhCCCHHHHHHHHHhh
Confidence 000 00 000112345678999999999999999999999999875
No 187
>PHA03211 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1.9e-35 Score=336.23 Aligned_cols=196 Identities=23% Similarity=0.329 Sum_probs=167.6
Q ss_pred HhcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCCcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCccc
Q 039533 624 ATSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFK 703 (949)
Q Consensus 624 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 703 (949)
...+|.+.+.||+|+||.||+|.+...++.||||... ...+.+|++++++++|+||+++++++...+ ..
T Consensus 167 ~~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~------~~~~~~E~~iL~~L~HpnIv~l~~~~~~~~-----~~ 235 (461)
T PHA03211 167 AGLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGW------YASSVHEARLLRRLSHPAVLALLDVRVVGG-----LT 235 (461)
T ss_pred ccCCeEEEEEEccCCCeEEEEEEECCCCCEEEEeccc------ccCHHHHHHHHHHCCCCCCCcEEEEEEECC-----EE
Confidence 3457999999999999999999999889999999642 234678999999999999999999876544 68
Q ss_pred eeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEe
Q 039533 704 ASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVG 783 (949)
Q Consensus 704 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~ 783 (949)
++|||++. ++|.+++.. ....+++.+++.|+.|++.||+|||++ +|+||||||+|||++.++.+||+
T Consensus 236 ~lv~e~~~-~~L~~~l~~---------~~~~l~~~~~~~i~~qi~~aL~yLH~~---gIvHrDLKP~NILl~~~~~vkL~ 302 (461)
T PHA03211 236 CLVLPKYR-SDLYTYLGA---------RLRPLGLAQVTAVARQLLSAIDYIHGE---GIIHRDIKTENVLVNGPEDICLG 302 (461)
T ss_pred EEEEEccC-CCHHHHHHh---------cCCCCCHHHHHHHHHHHHHHHHHHHHC---CEEECcCCHHHEEECCCCCEEEc
Confidence 99999995 688888852 223589999999999999999999977 89999999999999999999999
Q ss_pred ecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCC
Q 039533 784 DFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPI 843 (949)
Q Consensus 784 DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf 843 (949)
|||+++...............||..|+|||++.+..++.++|||||||++|||++|..|+
T Consensus 303 DFGla~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~l 362 (461)
T PHA03211 303 DFGAACFARGSWSTPFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASL 362 (461)
T ss_pred ccCCceecccccccccccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCc
Confidence 999998764433222222456999999999999999999999999999999999988765
No 188
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=100.00 E-value=5.2e-35 Score=317.28 Aligned_cols=271 Identities=23% Similarity=0.339 Sum_probs=206.7
Q ss_pred cCCCCCCeeeeecCceEEEEEEcC----CCEEEEEEEEecCCCc-chHHHHHHHHHHHhcCCCcceeEEeeeecccccCC
Q 039533 626 SGFSSANLVGVGSFGSVYKGIIDE----GRTTIAVKVFNLQHHG-ASRSFIAECKALKSIRHRNLVKVLTACLGADYRGN 700 (949)
Q Consensus 626 ~~y~~~~~lg~G~~g~Vy~~~~~~----~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 700 (949)
.+|++.+.||+|+||.||+|+... +++.||||+++..... ..+.+.+|++++++++||||+++++++... +.
T Consensus 4 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~---~~ 80 (284)
T cd05038 4 RHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEKP---GG 80 (284)
T ss_pred hhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeecC---CC
Confidence 357788999999999999998753 4789999999755443 457899999999999999999999987542 24
Q ss_pred ccceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCce
Q 039533 701 DFKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTA 780 (949)
Q Consensus 701 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~ 780 (949)
...++||||+++++|.+++.. ....+++..+..++.|++.||+|||+. +++||||||+||+++.++.+
T Consensus 81 ~~~~lv~e~~~~~~l~~~l~~---------~~~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~nil~~~~~~~ 148 (284)
T cd05038 81 RSLRLIMEYLPSGSLRDYLQR---------HRDQINLKRLLLFSSQICKGMDYLGSQ---RYIHRDLAARNILVESEDLV 148 (284)
T ss_pred CceEEEEecCCCCCHHHHHHh---------CccccCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHhEEEcCCCCE
Confidence 478999999999999999972 123589999999999999999999977 89999999999999999999
Q ss_pred EEeecccceecCCCCCc-cccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhccc
Q 039533 781 RVGDFGLARILSPDHTQ-TSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRK 859 (949)
Q Consensus 781 kl~DfG~a~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~ 859 (949)
+|+|||.+......... .......++..|+|||...+..++.++||||||+++|||++|+.||......... ....
T Consensus 149 ~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~---~~~~ 225 (284)
T cd05038 149 KISDFGLAKVLPEDKDYYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLR---MIGI 225 (284)
T ss_pred EEcccccccccccCCcceeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhcc---cccc
Confidence 99999999876533221 1111223566799999998888999999999999999999999998543221111 0000
Q ss_pred cCCCc----hhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHHhH
Q 039533 860 ALPDD----VMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHELQSIK 932 (949)
Q Consensus 860 ~~~~~----~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~ 932 (949)
..... +.+.+... .+.+....++.++.+++.+|++.+|++||||.||+++|++|+
T Consensus 226 ~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~i~ 284 (284)
T cd05038 226 AQGQMIVTRLLELLKEG------------------ERLPRPPSCPDEVYDLMKLCWEAEPQDRPSFADLILIVDRLR 284 (284)
T ss_pred ccccccHHHHHHHHHcC------------------CcCCCCccCCHHHHHHHHHHhccChhhCCCHHHHHHHHhhcC
Confidence 00000 11111110 011111234567899999999999999999999999999863
No 189
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=5.5e-35 Score=318.75 Aligned_cols=251 Identities=22% Similarity=0.299 Sum_probs=202.2
Q ss_pred hcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCCcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCccce
Q 039533 625 TSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFKA 704 (949)
Q Consensus 625 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 704 (949)
..+|++.+.||+|+||.||+|....+++.||+|.+........+.+.+|+.++++++|+||+++++++...+ ..+
T Consensus 18 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~-----~~~ 92 (297)
T cd06656 18 KKKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGD-----ELW 92 (297)
T ss_pred hhhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCC-----EEE
Confidence 367999999999999999999998889999999998665555677889999999999999999999976544 789
Q ss_pred eEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEee
Q 039533 705 SVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVGD 784 (949)
Q Consensus 705 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~D 784 (949)
+||||+++++|.+++. ...+++.++..++.|++.||.|||+. +++||||||+||+++.++.++|+|
T Consensus 93 lv~e~~~~~~L~~~~~-----------~~~~~~~~~~~~~~~l~~~L~~LH~~---~i~H~dL~p~Nili~~~~~~~l~D 158 (297)
T cd06656 93 VVMEYLAGGSLTDVVT-----------ETCMDEGQIAAVCRECLQALDFLHSN---QVIHRDIKSDNILLGMDGSVKLTD 158 (297)
T ss_pred EeecccCCCCHHHHHH-----------hCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEECc
Confidence 9999999999999985 13478889999999999999999977 999999999999999999999999
Q ss_pred cccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhccccCCCc
Q 039533 785 FGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKALPDD 864 (949)
Q Consensus 785 fG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~ 864 (949)
||.+.......... ....+++.|+|||...+..++.++|||||||++|++++|+.||...........
T Consensus 159 fg~~~~~~~~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~~---------- 226 (297)
T cd06656 159 FGFCAQITPEQSKR--STMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYL---------- 226 (297)
T ss_pred CccceEccCCccCc--CcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchheee----------
Confidence 99998765433221 123588899999999988899999999999999999999999953321110000
Q ss_pred hhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 039533 865 VMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVH 926 (949)
Q Consensus 865 ~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 926 (949)
..... .+. .......+..+.+++.+|++.+|++||+++|+++
T Consensus 227 ---~~~~~-~~~----------------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 268 (297)
T cd06656 227 ---IATNG-TPE----------------LQNPERLSAVFRDFLNRCLEMDVDRRGSAKELLQ 268 (297)
T ss_pred ---eccCC-CCC----------------CCCccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 00000 000 0001123455788999999999999999999987
No 190
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=100.00 E-value=5.3e-35 Score=320.64 Aligned_cols=278 Identities=21% Similarity=0.262 Sum_probs=202.0
Q ss_pred cCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCC-cchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCccce
Q 039533 626 SGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHH-GASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFKA 704 (949)
Q Consensus 626 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 704 (949)
++|++.+.||+|+||.||+|.+..++..+|+|.++.... ....++.+|++++++++||||+++++++...+ ..+
T Consensus 1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-----~~~ 75 (308)
T cd06615 1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDG-----EIS 75 (308)
T ss_pred CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCC-----EEE
Confidence 468999999999999999999998899999999875432 23356889999999999999999999976544 789
Q ss_pred eEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEee
Q 039533 705 SVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVGD 784 (949)
Q Consensus 705 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~D 784 (949)
+||||+++++|.+++.. ...+++..+..++.|+++||+|||+.+ +++||||||+||++++++.+||+|
T Consensus 76 lv~ey~~~~~L~~~l~~----------~~~~~~~~~~~~~~~i~~~l~~lH~~~--~i~H~dl~p~nil~~~~~~~~l~d 143 (308)
T cd06615 76 ICMEHMDGGSLDQVLKK----------AGRIPENILGKISIAVLRGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCD 143 (308)
T ss_pred EEeeccCCCcHHHHHHh----------cCCCCHHHHHHHHHHHHHHHHHHHhhC--CEEECCCChHHEEEecCCcEEEcc
Confidence 99999999999999962 245788999999999999999999732 899999999999999999999999
Q ss_pred cccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhccccCC--
Q 039533 785 FGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKALP-- 862 (949)
Q Consensus 785 fG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~-- 862 (949)
||.+........ ....|+..|+|||++.+..++.++|||||||++|||++|+.||...... ...........
T Consensus 144 fg~~~~~~~~~~----~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~--~~~~~~~~~~~~~ 217 (308)
T cd06615 144 FGVSGQLIDSMA----NSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAK--ELEAMFGRPVSEG 217 (308)
T ss_pred CCCccccccccc----ccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcchh--hHHHhhcCccccc
Confidence 999876533221 1345889999999998888999999999999999999999998633211 11111100000
Q ss_pred -Cc-hhhhcccCCCCCch-----hhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHH
Q 039533 863 -DD-VMDIVDSSLLPDDE-----DLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHEL 928 (949)
Q Consensus 863 -~~-~~~~~d~~l~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L 928 (949)
.. .............. +.........+ ...+ .......+.+++.+|+..+|++|||+.||++.-
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~ 288 (308)
T cd06615 218 EAKESHRPVSGHPPDSPRPMAIFELLDYIVNEPP-PKLP-SGAFSDEFQDFVDKCLKKNPKERADLKELTKHP 288 (308)
T ss_pred cccCCcccccCCCCCccchhhHHHHHHHHhcCCC-ccCc-CcccCHHHHHHHHHHccCChhhCcCHHHHhcCh
Confidence 00 00000000000000 00000000000 0000 001345689999999999999999999998763
No 191
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=100.00 E-value=9.8e-36 Score=328.99 Aligned_cols=244 Identities=25% Similarity=0.255 Sum_probs=187.8
Q ss_pred CeeeeecCceEEEEEEcCCCEEEEEEEEecCC---CcchHHHHHHHH-HHHhcCCCcceeEEeeeecccccCCccceeEe
Q 039533 632 NLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQH---HGASRSFIAECK-ALKSIRHRNLVKVLTACLGADYRGNDFKASVY 707 (949)
Q Consensus 632 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~-~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~ 707 (949)
+.||+|+||.||+|++..+++.||+|++.... ....+.+..|.. +++.++||||+++++++...+ ..++||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~-----~~~lv~ 75 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTE-----KLYFVL 75 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCC-----EEEEEE
Confidence 47999999999999999899999999997432 222345555655 467789999999998875544 789999
Q ss_pred eeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEeeccc
Q 039533 708 EFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVGDFGL 787 (949)
Q Consensus 708 e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~DfG~ 787 (949)
||+++|+|.+++. ....+++..+..++.||+.||+|||+. +|+||||||+||++++++.+||+|||+
T Consensus 76 e~~~~~~L~~~l~----------~~~~~~~~~~~~~~~qi~~al~~lH~~---givH~Dlkp~NIll~~~~~~kL~DfG~ 142 (325)
T cd05604 76 DFVNGGELFFHLQ----------RERSFPEPRARFYAAEIASALGYLHSI---NIVYRDLKPENILLDSQGHVVLTDFGL 142 (325)
T ss_pred cCCCCCCHHHHHH----------HcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEEEeecCC
Confidence 9999999998886 234688999999999999999999977 999999999999999999999999999
Q ss_pred ceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhccccCCCchhh
Q 039533 788 ARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKALPDDVMD 867 (949)
Q Consensus 788 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~ 867 (949)
++........ .....||..|+|||++.+..++.++|||||||++|||++|+.||...... ... ..
T Consensus 143 ~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~-----~~~--------~~ 207 (325)
T cd05604 143 CKEGIAQSDT--TTTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVA-----EMY--------DN 207 (325)
T ss_pred cccCCCCCCC--cccccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCHH-----HHH--------HH
Confidence 8753322211 12345899999999999989999999999999999999999999532111 000 01
Q ss_pred hcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHH
Q 039533 868 IVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHEL 928 (949)
Q Consensus 868 ~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L 928 (949)
+....+... ......+.+++.+|++.+|++||++.+.++.+
T Consensus 208 ~~~~~~~~~--------------------~~~~~~~~~ll~~ll~~~p~~R~~~~~~~~~i 248 (325)
T cd05604 208 ILHKPLVLR--------------------PGASLTAWSILEELLEKDRQRRLGAKEDFLEI 248 (325)
T ss_pred HHcCCccCC--------------------CCCCHHHHHHHHHHhccCHHhcCCCCCCHHHH
Confidence 111000000 01234567899999999999999987544433
No 192
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=4.1e-35 Score=321.60 Aligned_cols=270 Identities=22% Similarity=0.342 Sum_probs=204.5
Q ss_pred hcCCCCCCeeeeecCceEEEEEEcC-------CCEEEEEEEEecCC-CcchHHHHHHHHHHHhc-CCCcceeEEeeeecc
Q 039533 625 TSGFSSANLVGVGSFGSVYKGIIDE-------GRTTIAVKVFNLQH-HGASRSFIAECKALKSI-RHRNLVKVLTACLGA 695 (949)
Q Consensus 625 ~~~y~~~~~lg~G~~g~Vy~~~~~~-------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~ 695 (949)
.++|.+.+.||+|+||.||+|.+.. ....+|+|+++... .....++.+|+++++++ +||||+++++++...
T Consensus 17 ~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~ 96 (307)
T cd05098 17 RDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD 96 (307)
T ss_pred hHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecC
Confidence 3579999999999999999998642 23569999987543 23345688899999999 799999999997654
Q ss_pred cccCCccceeEeeeccCCChhhhcCCCCCCCc------cccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCC
Q 039533 696 DYRGNDFKASVYEFMHYGSLEEWLHPFTGEDE------IDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKP 769 (949)
Q Consensus 696 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~------~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp 769 (949)
+ ..++||||+++|+|.+++........ .......+++.+++.++.|++.||+|||+. +++||||||
T Consensus 97 ~-----~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---gi~H~dlkp 168 (307)
T cd05098 97 G-----PLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASK---KCIHRDLAA 168 (307)
T ss_pred C-----ceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHC---CcccccccH
Confidence 4 78999999999999999974321110 001224589999999999999999999976 999999999
Q ss_pred CCeeecCCCceEEeecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHh-CCCCCccccc
Q 039533 770 SNVLLDDYMTARVGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVI-GKKPIDIMFE 848 (949)
Q Consensus 770 ~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~ellt-g~~Pf~~~~~ 848 (949)
+||++++++.+||+|||.++...............++..|+|||++.+..++.++|||||||++|||++ |..||.....
T Consensus 169 ~Nill~~~~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~~~ 248 (307)
T cd05098 169 RNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPV 248 (307)
T ss_pred HheEEcCCCcEEECCCcccccccccchhhccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcCCH
Confidence 999999999999999999876543222111111224568999999988889999999999999999998 8888853211
Q ss_pred cCchhhhhccccCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHH
Q 039533 849 GDINLHNFGRKALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHEL 928 (949)
Q Consensus 849 ~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L 928 (949)
. ++.+.+...... +.....+..+.+++.+|++.+|++|||+.||++.|
T Consensus 249 ~--------------~~~~~~~~~~~~------------------~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~l 296 (307)
T cd05098 249 E--------------ELFKLLKEGHRM------------------DKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 296 (307)
T ss_pred H--------------HHHHHHHcCCCC------------------CCCCcCCHHHHHHHHHHcccChhhCcCHHHHHHHH
Confidence 0 011111100000 00113345788899999999999999999999999
Q ss_pred HHhHHh
Q 039533 929 QSIKNI 934 (949)
Q Consensus 929 ~~i~~~ 934 (949)
+++...
T Consensus 297 ~~~~~~ 302 (307)
T cd05098 297 DRILAL 302 (307)
T ss_pred HHHHHH
Confidence 998765
No 193
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=100.00 E-value=1.4e-35 Score=327.84 Aligned_cols=242 Identities=24% Similarity=0.244 Sum_probs=186.3
Q ss_pred CeeeeecCceEEEEEEcCCCEEEEEEEEecCC---CcchHHHHHHHH-HHHhcCCCcceeEEeeeecccccCCccceeEe
Q 039533 632 NLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQH---HGASRSFIAECK-ALKSIRHRNLVKVLTACLGADYRGNDFKASVY 707 (949)
Q Consensus 632 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~-~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~ 707 (949)
+.||+|+||.||+|++..+++.||+|++.... ......+..|.. +++.++||||+++++++...+ ..++||
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~-----~~~lv~ 75 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTAD-----KLYFVL 75 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCC-----eEEEEE
Confidence 47999999999999999889999999997432 122234444444 567789999999998875544 789999
Q ss_pred eeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEeeccc
Q 039533 708 EFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVGDFGL 787 (949)
Q Consensus 708 e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~DfG~ 787 (949)
||+++|+|.+++. ....++...+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 76 e~~~~~~L~~~~~----------~~~~~~~~~~~~~~~qi~~~L~~lH~~---giiHrDlkp~Nili~~~~~~kl~DfG~ 142 (325)
T cd05602 76 DYINGGELFYHLQ----------RERCFLEPRARFYAAEIASALGYLHSL---NIVYRDLKPENILLDSQGHIVLTDFGL 142 (325)
T ss_pred eCCCCCcHHHHHH----------hcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEEccCCC
Confidence 9999999999986 234577888899999999999999977 999999999999999999999999999
Q ss_pred ceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhccccCCCchhh
Q 039533 788 ARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKALPDDVMD 867 (949)
Q Consensus 788 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~ 867 (949)
++........ .....||+.|+|||++.+..++.++||||+||++|||++|+.||....... .. ..
T Consensus 143 a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~-----~~--------~~ 207 (325)
T cd05602 143 CKENIEHNGT--TSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAE-----MY--------DN 207 (325)
T ss_pred CcccccCCCC--cccccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCHHH-----HH--------HH
Confidence 9754322221 123459999999999999899999999999999999999999996321110 00 00
Q ss_pred hcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 039533 868 IVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVH 926 (949)
Q Consensus 868 ~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 926 (949)
+....... ....+..+.+++.+|++.||.+||++.+.+.
T Consensus 208 i~~~~~~~--------------------~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~ 246 (325)
T cd05602 208 ILNKPLQL--------------------KPNITNSARHLLEGLLQKDRTKRLGAKDDFM 246 (325)
T ss_pred HHhCCcCC--------------------CCCCCHHHHHHHHHHcccCHHHCCCCCCCHH
Confidence 10000000 0022445788999999999999999875443
No 194
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=100.00 E-value=6e-35 Score=311.54 Aligned_cols=250 Identities=27% Similarity=0.361 Sum_probs=197.7
Q ss_pred cCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCCcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCcccee
Q 039533 626 SGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFKAS 705 (949)
Q Consensus 626 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 705 (949)
.+|++.+.||+|+||.||+|... +..||+|.++.. ...+.+.+|+.++++++|+|++++++++... ....++
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~--~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~----~~~~~l 77 (256)
T cd05082 6 KELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKND--ATAQAFLAEASVMTQLRHSNLVQLLGVIVEE----KGGLYI 77 (256)
T ss_pred HhCeeeeeecccCCCeEEEEEEc--CCcEEEEEeCCC--chHHHHHHHHHHHHhCCCCCeeeEEEEEEcC----CCceEE
Confidence 47889999999999999999875 678999998643 2346789999999999999999999876432 236799
Q ss_pred EeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEeec
Q 039533 706 VYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVGDF 785 (949)
Q Consensus 706 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~Df 785 (949)
||||+++++|.+++... ....+++..+..++.|++.||+|||++ +++||||||+||++++++.+||+||
T Consensus 78 v~e~~~~~~L~~~~~~~--------~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~df 146 (256)
T cd05082 78 VTEYMAKGSLVDYLRSR--------GRSVLGGDCLLKFSLDVCEAMEYLEAN---NFVHRDLAARNVLVSEDNVAKVSDF 146 (256)
T ss_pred EEECCCCCcHHHHHHhc--------CCCCCCHHHHHHHHHHHHHHHHHHHhC---CEeccccchheEEEcCCCcEEecCC
Confidence 99999999999998621 123478999999999999999999977 8999999999999999999999999
Q ss_pred ccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHh-CCCCCccccccCchhhhhccccCCCc
Q 039533 786 GLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVI-GKKPIDIMFEGDINLHNFGRKALPDD 864 (949)
Q Consensus 786 G~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~ 864 (949)
|+++....... ...++..|+|||+..+..++.++|||||||++|||++ |+.||...... .....
T Consensus 147 g~~~~~~~~~~-----~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~~--~~~~~-------- 211 (256)
T cd05082 147 GLTKEASSTQD-----TGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK--DVVPR-------- 211 (256)
T ss_pred ccceeccccCC-----CCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCCHH--HHHHH--------
Confidence 99886543221 2235678999999988889999999999999999998 99998532110 01000
Q ss_pred hhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHHh
Q 039533 865 VMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHELQSI 931 (949)
Q Consensus 865 ~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i 931 (949)
+........ ...++..+.+++.+|++.+|++|||+.++++.|+++
T Consensus 212 ----~~~~~~~~~------------------~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~~ 256 (256)
T cd05082 212 ----VEKGYKMDA------------------PDGCPPVVYDVMKQCWHLDAATRPSFLQLREQLEHI 256 (256)
T ss_pred ----HhcCCCCCC------------------CCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHhcC
Confidence 000000000 013355788999999999999999999999999764
No 195
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=100.00 E-value=7.2e-36 Score=329.12 Aligned_cols=239 Identities=23% Similarity=0.239 Sum_probs=188.7
Q ss_pred CeeeeecCceEEEEEEc---CCCEEEEEEEEecCCC--cchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCccceeE
Q 039533 632 NLVGVGSFGSVYKGIID---EGRTTIAVKVFNLQHH--GASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFKASV 706 (949)
Q Consensus 632 ~~lg~G~~g~Vy~~~~~---~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv 706 (949)
+.||+|+||.||+++.. .+++.||+|+++.... .....+.+|++++++++||||+++++++...+ ..++|
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~-----~~~lv 76 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEG-----KLYLI 76 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCC-----EEEEE
Confidence 67999999999999863 4678999999974322 22346778999999999999999999876544 78999
Q ss_pred eeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEeecc
Q 039533 707 YEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVGDFG 786 (949)
Q Consensus 707 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~DfG 786 (949)
|||+++|+|.+++. ....+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+|||
T Consensus 77 ~e~~~~~~L~~~l~----------~~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kL~Dfg 143 (318)
T cd05582 77 LDFLRGGDLFTRLS----------KEVMFTEEDVKFYLAELALALDHLHSL---GIIYRDLKPENILLDEEGHIKLTDFG 143 (318)
T ss_pred EcCCCCCcHHHHHH----------HcCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHeEECCCCcEEEeecc
Confidence 99999999999986 234589999999999999999999977 89999999999999999999999999
Q ss_pred cceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhccccCCCchh
Q 039533 787 LARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKALPDDVM 866 (949)
Q Consensus 787 ~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~ 866 (949)
+++........ .....||..|+|||++.+..++.++|||||||++|||++|+.||....... .. .
T Consensus 144 ~~~~~~~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~--~~-----------~ 208 (318)
T cd05582 144 LSKESIDHEKK--AYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRKE--TM-----------T 208 (318)
T ss_pred CCcccCCCCCc--eecccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCHHH--HH-----------H
Confidence 99865443221 123568999999999998889999999999999999999999996431110 00 0
Q ss_pred hhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHH
Q 039533 867 DIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTN 923 (949)
Q Consensus 867 ~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~e 923 (949)
.+..... ..+ ...+..+.+++.+|++.||++||++.+
T Consensus 209 ~i~~~~~-~~p-------------------~~~~~~~~~li~~~l~~~P~~R~~a~~ 245 (318)
T cd05582 209 MILKAKL-GMP-------------------QFLSPEAQSLLRALFKRNPANRLGAGP 245 (318)
T ss_pred HHHcCCC-CCC-------------------CCCCHHHHHHHHHHhhcCHhHcCCCCC
Confidence 0000000 000 122345788999999999999999655
No 196
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=100.00 E-value=3.8e-35 Score=318.66 Aligned_cols=268 Identities=21% Similarity=0.289 Sum_probs=206.0
Q ss_pred HHHHHHHhcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCCcchHHHHHHHHHHHhc-CCCcceeEEeeeeccc
Q 039533 618 YQDLYNATSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHGASRSFIAECKALKSI-RHRNLVKVLTACLGAD 696 (949)
Q Consensus 618 ~~~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~ 696 (949)
++++..+.++|++.+.||+|+||.||+|.+..+++.+|+|+++... .....+.+|+.+++++ +||||+++++++....
T Consensus 10 ~~~~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~ 88 (286)
T cd06638 10 FDSFPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIH-DIDEEIEAEYNILKALSDHPNVVKFYGMYYKKD 88 (286)
T ss_pred eecCCCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeecccc-chHHHHHHHHHHHHHHhcCCCeeeeeeeeeecc
Confidence 4556678899999999999999999999998889999999986432 2345688899999999 6999999999986555
Q ss_pred ccCCccceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecC
Q 039533 697 YRGNDFKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDD 776 (949)
Q Consensus 697 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~ 776 (949)
.......++||||+++++|.+++.... .....+++..+..++.|++.|+.|||+. +++||||||+||++++
T Consensus 89 ~~~~~~~~lv~e~~~~~~L~~~l~~~~------~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nili~~ 159 (286)
T cd06638 89 VKNGDQLWLVLELCNGGSVTDLVKGFL------KRGERMEEPIIAYILHEALMGLQHLHVN---KTIHRDVKGNNILLTT 159 (286)
T ss_pred cCCCCeEEEEEeecCCCCHHHHHHHhh------ccCccccHHHHHHHHHHHHHHHHHHHhC---CccccCCCHHhEEECC
Confidence 445567899999999999999875211 1234578899999999999999999977 8999999999999999
Q ss_pred CCceEEeecccceecCCCCCccccccccCccCccCccccCC-----CccCCccchHHHHHHHHHHHhCCCCCccccccCc
Q 039533 777 YMTARVGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVG-----CEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDI 851 (949)
Q Consensus 777 ~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~ 851 (949)
++.+||+|||.++......... ....|+..|+|||++.. ..++.++||||+||++|||++|+.||.......
T Consensus 160 ~~~~kl~dfg~~~~~~~~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~- 236 (286)
T cd06638 160 EGGVKLVDFGVSAQLTSTRLRR--NTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPMR- 236 (286)
T ss_pred CCCEEEccCCceeecccCCCcc--ccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchhH-
Confidence 9999999999998764332211 13458999999998753 447889999999999999999999986331110
Q ss_pred hhhhhccccCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHH
Q 039533 852 NLHNFGRKALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHE 927 (949)
Q Consensus 852 ~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 927 (949)
....... . ..... .. .......+.+++.+|++.||++|||+.|+++.
T Consensus 237 ~~~~~~~-----~----~~~~~-~~-------------------~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~ 283 (286)
T cd06638 237 ALFKIPR-----N----PPPTL-HQ-------------------PELWSNEFNDFIRKCLTKDYEKRPTVSDLLQH 283 (286)
T ss_pred HHhhccc-----c----CCCcc-cC-------------------CCCcCHHHHHHHHHHccCCcccCCCHHHHhhc
Confidence 0000000 0 00000 00 00123457889999999999999999999874
No 197
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=100.00 E-value=7.6e-35 Score=310.81 Aligned_cols=251 Identities=29% Similarity=0.420 Sum_probs=201.4
Q ss_pred hcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCCcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCccce
Q 039533 625 TSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFKA 704 (949)
Q Consensus 625 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 704 (949)
.++|++.+.||.|+||.||+|... ++.||+|.++.... ..+++.+|+.++++++|+||+++++++... ...+
T Consensus 5 ~~~~~~~~~ig~g~~g~v~~~~~~--~~~v~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~-----~~~~ 76 (256)
T cd05039 5 SKELKLGATIGKGEFGDVMLGDYR--GQKVAVKCLKDDST-AAQAFLAEASVMTTLRHPNLVQLLGVVLQG-----NPLY 76 (256)
T ss_pred hhhccceeeeecCCCceEEEEEec--CcEEEEEEeccchh-HHHHHHHHHHHHHhcCCcceeeeEEEEcCC-----CCeE
Confidence 357889999999999999999986 78899999975543 457899999999999999999999997643 3789
Q ss_pred eEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEee
Q 039533 705 SVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVGD 784 (949)
Q Consensus 705 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~D 784 (949)
+||||+++++|.+++... ....+++..+..++.|++.|++|||++ +++||||||+||+++.++.+||+|
T Consensus 77 ~v~e~~~~~~L~~~~~~~--------~~~~~~~~~~~~~~~qi~~~l~~lh~~---~i~H~di~p~Nili~~~~~~~l~d 145 (256)
T cd05039 77 IVTEYMAKGSLVDYLRSR--------GRAVITLAQQLGFALDVCEGMEYLEEK---NFVHRDLAARNVLVSEDLVAKVSD 145 (256)
T ss_pred EEEEecCCCcHHHHHHhc--------CCCCCCHHHHHHHHHHHHHHHHHHHhC---CccchhcccceEEEeCCCCEEEcc
Confidence 999999999999998621 123589999999999999999999977 999999999999999999999999
Q ss_pred cccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHh-CCCCCccccccCchhhhhccccCCC
Q 039533 785 FGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVI-GKKPIDIMFEGDINLHNFGRKALPD 863 (949)
Q Consensus 785 fG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~ 863 (949)
||.++....... ...++..|+|||++....++.++||||||+++||+++ |..||......+ ..
T Consensus 146 ~g~~~~~~~~~~-----~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~--~~--------- 209 (256)
T cd05039 146 FGLAKEASQGQD-----SGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD--VV--------- 209 (256)
T ss_pred cccccccccccc-----cCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHHH--HH---------
Confidence 999987633222 1235678999999988889999999999999999997 999985331110 00
Q ss_pred chhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHHh
Q 039533 864 DVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHELQSI 931 (949)
Q Consensus 864 ~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i 931 (949)
..+....... .....+..+.+++.+|+..+|++|||+.|++++|+.+
T Consensus 210 ---~~~~~~~~~~------------------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~~ 256 (256)
T cd05039 210 ---PHVEKGYRME------------------APEGCPPEVYKVMKDCWELDPAKRPTFKQLREQLALI 256 (256)
T ss_pred ---HHHhcCCCCC------------------CccCCCHHHHHHHHHHhccChhhCcCHHHHHHHHhcC
Confidence 0000000000 0012345688999999999999999999999999764
No 198
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=100.00 E-value=5.1e-35 Score=318.47 Aligned_cols=269 Identities=24% Similarity=0.274 Sum_probs=207.5
Q ss_pred cCHHHHHHHhcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCCcchHHHHHHHHHHHhc-CCCcceeEEeeeec
Q 039533 616 LSYQDLYNATSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHGASRSFIAECKALKSI-RHRNLVKVLTACLG 694 (949)
Q Consensus 616 ~~~~~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~ 694 (949)
++.+++..++++|.+.+.||+|+||.||+|....+++.+|+|++.... .....+.+|+.+++++ +|||++++++++..
T Consensus 12 ~~~~~~~~~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~ 90 (291)
T cd06639 12 LGLESLGDPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPIS-DVDEEIEAEYNILQSLPNHPNVVKFYGMFYK 90 (291)
T ss_pred hhcccCCCCCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccc-cHHHHHHHHHHHHHHhcCCCCeEEEEEEEEe
Confidence 455666778899999999999999999999998889999999986432 2345678899999999 79999999999876
Q ss_pred ccccCCccceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeee
Q 039533 695 ADYRGNDFKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLL 774 (949)
Q Consensus 695 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll 774 (949)
.+.......++||||+++++|.++++... .....+++..++.++.|++.||+|||+. +++||||||+||++
T Consensus 91 ~~~~~~~~~~lv~ey~~~~sL~~~~~~~~------~~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~nili 161 (291)
T cd06639 91 ADKLVGGQLWLVLELCNGGSVTELVKGLL------ICGQRLDEAMISYILYGALLGLQHLHNN---RIIHRDVKGNNILL 161 (291)
T ss_pred ccccCCCeeEEEEEECCCCcHHHHHHHhh------hcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEE
Confidence 55444457899999999999999886211 1234588999999999999999999977 99999999999999
Q ss_pred cCCCceEEeecccceecCCCCCccccccccCccCccCccccCCC-----ccCCccchHHHHHHHHHHHhCCCCCcccccc
Q 039533 775 DDYMTARVGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGC-----EVSTNGDVYSYGILLLELVIGKKPIDIMFEG 849 (949)
Q Consensus 775 ~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~ 849 (949)
+.++.+||+|||.+.......... ....|+..|+|||++... .++.++|||||||++|||++|+.||......
T Consensus 162 ~~~~~~kl~dfg~~~~~~~~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~ 239 (291)
T cd06639 162 TTEGGVKLVDFGVSAQLTSTRLRR--NTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPV 239 (291)
T ss_pred cCCCCEEEeecccchhcccccccc--cCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHH
Confidence 999999999999988654322211 124588999999987543 3689999999999999999999998643211
Q ss_pred CchhhhhccccCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 039533 850 DINLHNFGRKALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVH 926 (949)
Q Consensus 850 ~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 926 (949)
. ......+.. . . .. ....+....+.+++.+|++.+|++||++.|+++
T Consensus 240 ~-~~~~~~~~~-~---~-----~~--------------------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 286 (291)
T cd06639 240 K-TLFKIPRNP-P---P-----TL--------------------LHPEKWCRSFNHFISQCLIKDFEARPSVTHLLE 286 (291)
T ss_pred H-HHHHHhcCC-C---C-----CC--------------------CcccccCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence 0 000000000 0 0 00 000123346889999999999999999999975
No 199
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=3.6e-35 Score=329.92 Aligned_cols=204 Identities=21% Similarity=0.253 Sum_probs=171.7
Q ss_pred HhcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCC--CcchHHHHHHHHHHHhcCCCcceeEEeeeeccc-ccCC
Q 039533 624 ATSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQH--HGASRSFIAECKALKSIRHRNLVKVLTACLGAD-YRGN 700 (949)
Q Consensus 624 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~-~~~~ 700 (949)
..++|++.+.||+|+||.||+|.+...++.||||++.... ....+.+.+|+.+++.++||||+++++++...+ ....
T Consensus 22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~ 101 (364)
T cd07875 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEF 101 (364)
T ss_pred hhcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeeccccccccc
Confidence 4578999999999999999999998889999999986432 233467889999999999999999998875432 1233
Q ss_pred ccceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCce
Q 039533 701 DFKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTA 780 (949)
Q Consensus 701 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~ 780 (949)
...++||||+++ ++.+++. ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+
T Consensus 102 ~~~~lv~e~~~~-~l~~~~~------------~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~ 165 (364)
T cd07875 102 QDVYIVMELMDA-NLCQVIQ------------MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTL 165 (364)
T ss_pred CeEEEEEeCCCC-CHHHHHH------------hcCCHHHHHHHHHHHHHHHHHHhhC---CeecCCCCHHHEEECCCCcE
Confidence 457999999975 7777764 2377888999999999999999977 99999999999999999999
Q ss_pred EEeecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccc
Q 039533 781 RVGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIM 846 (949)
Q Consensus 781 kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~ 846 (949)
||+|||+++........ ....||..|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 166 kL~DfG~a~~~~~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~ 228 (364)
T cd07875 166 KILDFGLARTAGTSFMM---TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGT 228 (364)
T ss_pred EEEeCCCccccCCCCcc---cCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCC
Confidence 99999999865433221 1345899999999999999999999999999999999999999643
No 200
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=5.9e-35 Score=318.18 Aligned_cols=250 Identities=22% Similarity=0.285 Sum_probs=201.4
Q ss_pred cCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCCcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCcccee
Q 039533 626 SGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFKAS 705 (949)
Q Consensus 626 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 705 (949)
.+|++.+.||.|++|.||+|.+..+++.||+|.+........+.+.+|++++++++||||+++++++...+ ..++
T Consensus 19 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~-----~~~l 93 (296)
T cd06655 19 KKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFLVGD-----ELFV 93 (296)
T ss_pred ceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcCCCceeeeeeeEecCc-----eEEE
Confidence 46889999999999999999998889999999997665555678899999999999999999999976544 7899
Q ss_pred EeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEeec
Q 039533 706 VYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVGDF 785 (949)
Q Consensus 706 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~Df 785 (949)
||||+++++|.+++. ...+++.++..++.|++.|++|||+. +++||||||+||+++.++.+||+||
T Consensus 94 v~e~~~~~~L~~~~~-----------~~~l~~~~~~~i~~~l~~al~~LH~~---~i~H~dL~p~Nili~~~~~~kl~df 159 (296)
T cd06655 94 VMEYLAGGSLTDVVT-----------ETCMDEAQIAAVCRECLQALEFLHAN---QVIHRDIKSDNVLLGMDGSVKLTDF 159 (296)
T ss_pred EEEecCCCcHHHHHH-----------hcCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEccC
Confidence 999999999999885 23478999999999999999999977 9999999999999999999999999
Q ss_pred ccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhccccCCCch
Q 039533 786 GLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKALPDDV 865 (949)
Q Consensus 786 G~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~ 865 (949)
|.+.......... ....++..|+|||.+.+..++.++|||||||++|+|++|+.||.......... .. .....
T Consensus 160 g~~~~~~~~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~~~-~~-~~~~~--- 232 (296)
T cd06655 160 GFCAQITPEQSKR--STMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALY-LI-ATNGT--- 232 (296)
T ss_pred ccchhcccccccC--CCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH-HH-HhcCC---
Confidence 9987654433211 13458899999999998889999999999999999999999996432211000 00 00000
Q ss_pred hhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 039533 866 MDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVH 926 (949)
Q Consensus 866 ~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 926 (949)
+.+ ......+..+.+++.+||..||++||++.++++
T Consensus 233 -----~~~--------------------~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~il~ 268 (296)
T cd06655 233 -----PEL--------------------QNPEKLSPIFRDFLNRCLEMDVEKRGSAKELLQ 268 (296)
T ss_pred -----ccc--------------------CCcccCCHHHHHHHHHHhhcChhhCCCHHHHhh
Confidence 000 001123456788999999999999999999974
No 201
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=100.00 E-value=8.4e-35 Score=312.73 Aligned_cols=256 Identities=22% Similarity=0.263 Sum_probs=197.9
Q ss_pred HHHhcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCCcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCc
Q 039533 622 YNATSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGND 701 (949)
Q Consensus 622 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 701 (949)
+-+++.+.....||+|+||.||+|++..+++.||+|.+........+.+.+|+.++++++|+||+++++++...+
T Consensus 4 ~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~----- 78 (268)
T cd06624 4 EYEYDENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDSENG----- 78 (268)
T ss_pred ccccccCCceEEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCC-----
Confidence 345566666789999999999999998889999999987665555678999999999999999999999976544
Q ss_pred cceeEeeeccCCChhhhcCCCCCCCccccCCCCC--CHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecC-CC
Q 039533 702 FKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNL--NLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDD-YM 778 (949)
Q Consensus 702 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l--~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~-~~ 778 (949)
..++|+||+++++|.+++... ...+ ++..+..++.|++.|++|||+. +|+||||||+||+++. ++
T Consensus 79 ~~~lv~e~~~~~~L~~~l~~~---------~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~h~dl~p~nil~~~~~~ 146 (268)
T cd06624 79 FFKIFMEQVPGGSLSALLRSK---------WGPLKDNEQTIIFYTKQILEGLKYLHDN---QIVHRDIKGDNVLVNTYSG 146 (268)
T ss_pred EEEEEEecCCCCCHHHHHHHh---------cccCCCcHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCC
Confidence 789999999999999998621 1223 7788889999999999999977 9999999999999976 67
Q ss_pred ceEEeecccceecCCCCCccccccccCccCccCccccCCCc--cCCccchHHHHHHHHHHHhCCCCCccccccCchhhhh
Q 039533 779 TARVGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCE--VSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNF 856 (949)
Q Consensus 779 ~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~ 856 (949)
.++|+|||.+.......... ....|+..|+|||++.+.. ++.++||||||+++|+|++|+.||.......... +
T Consensus 147 ~~~l~dfg~~~~~~~~~~~~--~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~~~--~ 222 (268)
T cd06624 147 VVKISDFGTSKRLAGINPCT--ETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQAAM--F 222 (268)
T ss_pred eEEEecchhheecccCCCcc--ccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhhhH--h
Confidence 99999999997654322211 1234889999999986643 7899999999999999999999985321111000 0
Q ss_pred ccccCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 039533 857 GRKALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVH 926 (949)
Q Consensus 857 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 926 (949)
... .... .+. ........+.+++.+|++.+|++|||+.|+++
T Consensus 223 ~~~---------~~~~-~~~------------------~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~ 264 (268)
T cd06624 223 KVG---------MFKI-HPE------------------IPESLSAEAKNFILRCFEPDPDKRASAHDLLQ 264 (268)
T ss_pred hhh---------hhcc-CCC------------------CCcccCHHHHHHHHHHcCCCchhCCCHHHHHh
Confidence 000 0000 000 00123456789999999999999999999875
No 202
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=100.00 E-value=3.1e-35 Score=314.58 Aligned_cols=253 Identities=28% Similarity=0.400 Sum_probs=198.3
Q ss_pred CCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCCcchH--HHHHHHHHHHhcCCCcceeEEeeeecccccCCcccee
Q 039533 628 FSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHGASR--SFIAECKALKSIRHRNLVKVLTACLGADYRGNDFKAS 705 (949)
Q Consensus 628 y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~--~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 705 (949)
|++.+.||+|+||+||+|....+++.||+|++......... ...+|+.++++++||||+++++++.... ..++
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~-----~~~~ 75 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDDN-----YLYI 75 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESS-----EEEE
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhccccccccccccccccccccc-----cccc
Confidence 56778999999999999999999999999999866543322 3456999999999999999999976543 7899
Q ss_pred EeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEeec
Q 039533 706 VYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVGDF 785 (949)
Q Consensus 706 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~Df 785 (949)
||||+++++|.+++. ....+++.++..++.|+++||+|||+. +|+||||||+||++++++.++|+||
T Consensus 76 v~~~~~~~~L~~~l~----------~~~~~~~~~~~~~~~qi~~~L~~Lh~~---~i~H~dikp~NIl~~~~~~~~l~Df 142 (260)
T PF00069_consen 76 VMEYCPGGSLQDYLQ----------KNKPLSEEEILKIAYQILEALAYLHSK---GIVHRDIKPENILLDENGEVKLIDF 142 (260)
T ss_dssp EEEEETTEBHHHHHH----------HHSSBBHHHHHHHHHHHHHHHHHHHHT---TEEESSBSGGGEEESTTSEEEESSG
T ss_pred ccccccccccccccc----------ccccccccccccccccccccccccccc---ccccccccccccccccccccccccc
Confidence 999999999999996 345689999999999999999999987 9999999999999999999999999
Q ss_pred ccceecCCCCCccccccccCccCccCccccC-CCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhccccCCCc
Q 039533 786 GLARILSPDHTQTSSFSVKGSLGYIAPEYGV-GCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKALPDD 864 (949)
Q Consensus 786 G~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~ 864 (949)
|.+........ ......++..|+|||+.. +..++.++||||+|+++|+|++|..||......+ ...
T Consensus 143 g~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~--~~~--------- 209 (260)
T PF00069_consen 143 GSSVKLSENNE--NFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSDD--QLE--------- 209 (260)
T ss_dssp TTTEESTSTTS--EBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHH--HHH---------
T ss_pred ccccccccccc--ccccccccccccccccccccccccccccccccccccccccccccccccccchh--hhh---------
Confidence 99987522222 222456899999999998 7889999999999999999999999986431000 000
Q ss_pred hhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 039533 865 VMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVH 926 (949)
Q Consensus 865 ~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 926 (949)
.+ .....................+.+++.+|++.||++||++.|+++
T Consensus 210 ---~~------------~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~l~~ 256 (260)
T PF00069_consen 210 ---II------------EKILKRPLPSSSQQSREKSEELRDLIKKMLSKDPEQRPSAEELLK 256 (260)
T ss_dssp ---HH------------HHHHHTHHHHHTTSHTTSHHHHHHHHHHHSSSSGGGSTTHHHHHT
T ss_pred ---hh------------hhcccccccccccccchhHHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 00 000000000000000111367899999999999999999999875
No 203
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=100.00 E-value=4.2e-35 Score=323.88 Aligned_cols=194 Identities=25% Similarity=0.312 Sum_probs=166.4
Q ss_pred CeeeeecCceEEEEEEcCCCEEEEEEEEecCC---CcchHHHHHHHHHHHhc-CCCcceeEEeeeecccccCCccceeEe
Q 039533 632 NLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQH---HGASRSFIAECKALKSI-RHRNLVKVLTACLGADYRGNDFKASVY 707 (949)
Q Consensus 632 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~~lv~ 707 (949)
+.||+|+||.||+|+...+++.||+|+++... ....+.+.+|+.++.++ +||+|+++++++...+ ..++||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~-----~~~lv~ 75 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTS-----RLFLVI 75 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCC-----EEEEEE
Confidence 47999999999999999899999999997542 22345678899999888 6999999999875444 789999
Q ss_pred eeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEeeccc
Q 039533 708 EFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVGDFGL 787 (949)
Q Consensus 708 e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~DfG~ 787 (949)
||+++|+|.+++. ....+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+
T Consensus 76 e~~~~~~L~~~~~----------~~~~l~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~Nili~~~~~~kl~Dfg~ 142 (327)
T cd05617 76 EYVNGGDLMFHMQ----------RQRKLPEEHARFYAAEICIALNFLHER---GIIYRDLKLDNVLLDADGHIKLTDYGM 142 (327)
T ss_pred eCCCCCcHHHHHH----------HcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEeCCCCEEEecccc
Confidence 9999999998886 234589999999999999999999977 999999999999999999999999999
Q ss_pred ceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCcc
Q 039533 788 ARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDI 845 (949)
Q Consensus 788 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~ 845 (949)
++........ .....||+.|+|||++.+..++.++|||||||++|||++|+.||+.
T Consensus 143 ~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~ 198 (327)
T cd05617 143 CKEGLGPGDT--TSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDI 198 (327)
T ss_pred ceeccCCCCc--eecccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCc
Confidence 8753322211 1234589999999999999999999999999999999999999963
No 204
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=100.00 E-value=3.7e-35 Score=323.72 Aligned_cols=242 Identities=24% Similarity=0.271 Sum_probs=189.8
Q ss_pred CCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCC---CcchHHHHHHHHHHHhcC-CCcceeEEeeeecccccCCcc
Q 039533 627 GFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQH---HGASRSFIAECKALKSIR-HRNLVKVLTACLGADYRGNDF 702 (949)
Q Consensus 627 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~~~ 702 (949)
+|+..+.||+|+||.||+|++..+++.||+|+++... ....+.+..|..++..+. |++|+++++++...+ .
T Consensus 1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~-----~ 75 (323)
T cd05615 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVD-----R 75 (323)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCC-----E
Confidence 4777899999999999999999899999999997432 233456778999998886 577888888765443 7
Q ss_pred ceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEE
Q 039533 703 KASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARV 782 (949)
Q Consensus 703 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl 782 (949)
.++||||+++|+|.+++. ....+++.++..++.|++.||+|||++ +|+||||||+||+++.++.+||
T Consensus 76 ~~lv~Ey~~~g~L~~~i~----------~~~~l~~~~~~~i~~qi~~al~~lH~~---~ivHrDikp~Nill~~~~~ikL 142 (323)
T cd05615 76 LYFVMEYVNGGDLMYHIQ----------QVGKFKEPQAVFYAAEISVGLFFLHRR---GIIYRDLKLDNVMLDSEGHIKI 142 (323)
T ss_pred EEEEEcCCCCCcHHHHHH----------HcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEE
Confidence 899999999999999986 234588999999999999999999977 9999999999999999999999
Q ss_pred eecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhccccCC
Q 039533 783 GDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKALP 862 (949)
Q Consensus 783 ~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~ 862 (949)
+|||+++......... ....||+.|+|||++.+..++.++||||+||++|||++|+.||....... .
T Consensus 143 ~Dfg~~~~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~--~--------- 209 (323)
T cd05615 143 ADFGMCKEHMVDGVTT--RTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDE--L--------- 209 (323)
T ss_pred eccccccccCCCCccc--cCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCHHH--H---------
Confidence 9999987543322211 13458999999999998889999999999999999999999996432110 0
Q ss_pred CchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCH
Q 039533 863 DDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNM 921 (949)
Q Consensus 863 ~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~ 921 (949)
...+...... .+ ...+..+.+++.+|++.+|++|++.
T Consensus 210 --~~~i~~~~~~-~p-------------------~~~~~~~~~li~~~l~~~p~~R~~~ 246 (323)
T cd05615 210 --FQSIMEHNVS-YP-------------------KSLSKEAVSICKGLMTKHPSKRLGC 246 (323)
T ss_pred --HHHHHhCCCC-CC-------------------ccCCHHHHHHHHHHcccCHhhCCCC
Confidence 0001110000 00 0223456889999999999999985
No 205
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=100.00 E-value=9.8e-35 Score=312.57 Aligned_cols=258 Identities=23% Similarity=0.362 Sum_probs=202.1
Q ss_pred cCCCCCCeeeeecCceEEEEEEcCC---CEEEEEEEEecCC-CcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCc
Q 039533 626 SGFSSANLVGVGSFGSVYKGIIDEG---RTTIAVKVFNLQH-HGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGND 701 (949)
Q Consensus 626 ~~y~~~~~lg~G~~g~Vy~~~~~~~---~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 701 (949)
++|++.+.||+|+||.||+|.+... ...||+|...... ....+.+.+|+.++++++||||+++++++...
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~------ 79 (270)
T cd05056 6 EDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITEN------ 79 (270)
T ss_pred hhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEcCC------
Confidence 4688899999999999999987533 3568999886544 33456789999999999999999999987532
Q ss_pred cceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceE
Q 039533 702 FKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTAR 781 (949)
Q Consensus 702 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~k 781 (949)
..++||||+++++|.+++.. ....+++..++.++.|++.||+|||+. +++||||||+||+++.++.+|
T Consensus 80 ~~~lv~e~~~~~~L~~~l~~---------~~~~~~~~~~~~~~~~l~~~l~~lH~~---~~~H~dl~p~nili~~~~~~~ 147 (270)
T cd05056 80 PVWIVMELAPLGELRSYLQV---------NKYSLDLASLILYSYQLSTALAYLESK---RFVHRDIAARNVLVSSPDCVK 147 (270)
T ss_pred CcEEEEEcCCCCcHHHHHHh---------CCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccChheEEEecCCCeE
Confidence 46899999999999999962 123589999999999999999999977 899999999999999999999
Q ss_pred EeecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHh-CCCCCccccccCchhhhhcccc
Q 039533 782 VGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVI-GKKPIDIMFEGDINLHNFGRKA 860 (949)
Q Consensus 782 l~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~ellt-g~~Pf~~~~~~~~~~~~~~~~~ 860 (949)
|+|||+++........... ...++..|+|||.+....++.++||||||+++||+++ |+.||........ .. ..
T Consensus 148 l~d~g~~~~~~~~~~~~~~-~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~-~~-~~--- 221 (270)
T cd05056 148 LGDFGLSRYLEDESYYKAS-KGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNNDV-IG-RI--- 221 (270)
T ss_pred EccCceeeecccccceecC-CCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHHH-HH-HH---
Confidence 9999999876544322111 2234568999999888889999999999999999996 9999864322110 00 00
Q ss_pred CCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHHhHHh
Q 039533 861 LPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHELQSIKNI 934 (949)
Q Consensus 861 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~~~ 934 (949)
.... +.....+++..+.+++.+|+..+|++|||+.|+++.|++++..
T Consensus 222 --------~~~~-------------------~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~~~~l~~~~~~ 268 (270)
T cd05056 222 --------ENGE-------------------RLPMPPNCPPTLYSLMTKCWAYDPSKRPRFTELKAQLSDILQE 268 (270)
T ss_pred --------HcCC-------------------cCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence 0000 0000113455788999999999999999999999999998654
No 206
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=9.2e-35 Score=322.66 Aligned_cols=270 Identities=22% Similarity=0.348 Sum_probs=204.6
Q ss_pred cCCCCCCeeeeecCceEEEEEEcC-------CCEEEEEEEEecCC-CcchHHHHHHHHHHHhc-CCCcceeEEeeeeccc
Q 039533 626 SGFSSANLVGVGSFGSVYKGIIDE-------GRTTIAVKVFNLQH-HGASRSFIAECKALKSI-RHRNLVKVLTACLGAD 696 (949)
Q Consensus 626 ~~y~~~~~lg~G~~g~Vy~~~~~~-------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~ 696 (949)
.+|++.+.||+|+||.||+|++.. .+..||+|+++... ....+.+.+|+++++++ +||||+++++++...+
T Consensus 12 ~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 91 (334)
T cd05100 12 TRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDG 91 (334)
T ss_pred hHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEccCC
Confidence 468999999999999999998642 22468999886432 22346788999999999 7999999999976544
Q ss_pred ccCCccceeEeeeccCCChhhhcCCCCCCCc------cccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCC
Q 039533 697 YRGNDFKASVYEFMHYGSLEEWLHPFTGEDE------IDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPS 770 (949)
Q Consensus 697 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~------~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~ 770 (949)
..+++|||+++|+|.+++........ .......+++.+++.++.|++.||+|||+. +++||||||+
T Consensus 92 -----~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---givH~dlkp~ 163 (334)
T cd05100 92 -----PLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQ---KCIHRDLAAR 163 (334)
T ss_pred -----ceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHC---Ceeccccccc
Confidence 78999999999999999974321100 011234588999999999999999999977 9999999999
Q ss_pred CeeecCCCceEEeecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHh-CCCCCcccccc
Q 039533 771 NVLLDDYMTARVGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVI-GKKPIDIMFEG 849 (949)
Q Consensus 771 NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~ellt-g~~Pf~~~~~~ 849 (949)
||++++++.+||+|||.++...............++..|+|||++.+..++.++|||||||++|||++ |..||......
T Consensus 164 Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~ 243 (334)
T cd05100 164 NVLVTEDNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVE 243 (334)
T ss_pred eEEEcCCCcEEECCcccceecccccccccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCCCHH
Confidence 99999999999999999987654332222222234578999999999889999999999999999998 88888532111
Q ss_pred CchhhhhccccCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHH
Q 039533 850 DINLHNFGRKALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHELQ 929 (949)
Q Consensus 850 ~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~ 929 (949)
+ . ...+......+ ....++..+.+++.+|++.+|++||++.|+++.|+
T Consensus 244 ~-----~---------~~~~~~~~~~~------------------~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~l~ 291 (334)
T cd05100 244 E-----L---------FKLLKEGHRMD------------------KPANCTHELYMIMRECWHAVPSQRPTFKQLVEDLD 291 (334)
T ss_pred H-----H---------HHHHHcCCCCC------------------CCCCCCHHHHHHHHHHcccChhhCcCHHHHHHHHH
Confidence 0 0 00000000000 00123456889999999999999999999999999
Q ss_pred HhHHhh
Q 039533 930 SIKNIL 935 (949)
Q Consensus 930 ~i~~~~ 935 (949)
++....
T Consensus 292 ~~~~~~ 297 (334)
T cd05100 292 RVLTVT 297 (334)
T ss_pred HHhhhc
Confidence 997543
No 207
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=100.00 E-value=7.6e-35 Score=318.72 Aligned_cols=261 Identities=27% Similarity=0.412 Sum_probs=201.7
Q ss_pred hcCCCCCCeeeeecCceEEEEEEcCCCE----EEEEEEEecCCC-cchHHHHHHHHHHHhcCCCcceeEEeeeecccccC
Q 039533 625 TSGFSSANLVGVGSFGSVYKGIIDEGRT----TIAVKVFNLQHH-GASRSFIAECKALKSIRHRNLVKVLTACLGADYRG 699 (949)
Q Consensus 625 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~----~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 699 (949)
.++|+..+.||+|+||.||+|.+..++. .||+|++..... .....+.+|+.++++++||||+++++++...
T Consensus 6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~---- 81 (303)
T cd05110 6 ETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSP---- 81 (303)
T ss_pred hhhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC----
Confidence 3567888999999999999999865554 578888764432 2234688999999999999999999987532
Q ss_pred CccceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCc
Q 039533 700 NDFKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMT 779 (949)
Q Consensus 700 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~ 779 (949)
..++++||+++|+|.+++.. ....+++..+..++.|++.||+|||++ +|+||||||+||+++.++.
T Consensus 82 --~~~~v~e~~~~g~l~~~~~~---------~~~~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~dikp~Nill~~~~~ 147 (303)
T cd05110 82 --TIQLVTQLMPHGCLLDYVHE---------HKDNIGSQLLLNWCVQIAKGMMYLEER---RLVHRDLAARNVLVKSPNH 147 (303)
T ss_pred --CceeeehhcCCCCHHHHHHh---------cccCCCHHHHHHHHHHHHHHHHHHhhc---CeeccccccceeeecCCCc
Confidence 35789999999999999862 223578899999999999999999977 8999999999999999999
Q ss_pred eEEeecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHh-CCCCCccccccCchhhhhcc
Q 039533 780 ARVGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVI-GKKPIDIMFEGDINLHNFGR 858 (949)
Q Consensus 780 ~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~ellt-g~~Pf~~~~~~~~~~~~~~~ 858 (949)
+||+|||+++...............++..|+|||++.+..++.++|||||||++||+++ |+.||....... ..
T Consensus 148 ~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~~~--~~---- 221 (303)
T cd05110 148 VKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTRE--IP---- 221 (303)
T ss_pred eEEccccccccccCcccccccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCHHH--HH----
Confidence 99999999987654332222222345778999999998889999999999999999998 999985331110 11
Q ss_pred ccCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHHhHHhh
Q 039533 859 KALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHELQSIKNIL 935 (949)
Q Consensus 859 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~~~~ 935 (949)
+++....... ....++..+.+++..||..+|++||+++|+++.++++....
T Consensus 222 --------~~~~~~~~~~------------------~~~~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~l~~~~~~~ 272 (303)
T cd05110 222 --------DLLEKGERLP------------------QPPICTIDVYMVMVKCWMIDADSRPKFKELAAEFSRMARDP 272 (303)
T ss_pred --------HHHHCCCCCC------------------CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhch
Confidence 1111000000 00012345788999999999999999999999999986554
No 208
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=100.00 E-value=8.4e-35 Score=315.19 Aligned_cols=250 Identities=24% Similarity=0.282 Sum_probs=196.4
Q ss_pred CCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCCcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCccceeEe
Q 039533 628 FSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFKASVY 707 (949)
Q Consensus 628 y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~ 707 (949)
|++.+.||+|+||.||+|.+..++..+++|.+........+.+.+|+++++.++||||+++++++.... ..++||
T Consensus 7 ~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~-----~~~~v~ 81 (282)
T cd06643 7 WEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYEN-----NLWILI 81 (282)
T ss_pred HHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCC-----EEEEEE
Confidence 567889999999999999999889999999987655555677889999999999999999999976544 789999
Q ss_pred eeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEeeccc
Q 039533 708 EFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVGDFGL 787 (949)
Q Consensus 708 e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~DfG~ 787 (949)
||+++++|.+++.. ....+++..+..++.|++.||+|||+. +++||||||+||+++.++.+||+|||+
T Consensus 82 e~~~~~~l~~~~~~---------~~~~l~~~~~~~~~~qi~~~L~~LH~~---~i~H~dlkp~nili~~~~~~kl~dfg~ 149 (282)
T cd06643 82 EFCAGGAVDAVMLE---------LERPLTEPQIRVVCKQTLEALNYLHEN---KIIHRDLKAGNILFTLDGDIKLADFGV 149 (282)
T ss_pred EecCCCcHHHHHHh---------cCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCcccEEEccCCCEEEccccc
Confidence 99999999988752 124589999999999999999999977 999999999999999999999999999
Q ss_pred ceecCCCCCccccccccCccCccCccccC-----CCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhccccCC
Q 039533 788 ARILSPDHTQTSSFSVKGSLGYIAPEYGV-----GCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKALP 862 (949)
Q Consensus 788 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~ 862 (949)
+......... .....++..|+|||++. +..++.++|||||||++|||++|++||....... ......... .
T Consensus 150 ~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~-~~~~~~~~~-~ 225 (282)
T cd06643 150 SAKNTRTIQR--RDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMR-VLLKIAKSE-P 225 (282)
T ss_pred cccccccccc--cccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHHH-HHHHHhhcC-C
Confidence 8765432211 12345899999999874 3457889999999999999999999986432111 000000000 0
Q ss_pred CchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 039533 863 DDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVH 926 (949)
Q Consensus 863 ~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 926 (949)
... . .....+..+.+++.+||+.+|++||++.++++
T Consensus 226 --------~~~-~-------------------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 261 (282)
T cd06643 226 --------PTL-A-------------------QPSRWSSEFKDFLKKCLEKNVDARWTTTQLLQ 261 (282)
T ss_pred --------CCC-C-------------------CccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 000 0 00123456789999999999999999999865
No 209
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=100.00 E-value=1.2e-34 Score=310.49 Aligned_cols=254 Identities=23% Similarity=0.300 Sum_probs=202.3
Q ss_pred cCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCCcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCcccee
Q 039533 626 SGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFKAS 705 (949)
Q Consensus 626 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 705 (949)
++|++.+.||+|+||.||+|....+++.+|+|++........+.+.+|++++++++||||+++++++.... ..++
T Consensus 3 ~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~-----~~~l 77 (262)
T cd06613 3 EDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSYLRRD-----KLWI 77 (262)
T ss_pred cceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCCCChhceEEEEEeCC-----EEEE
Confidence 57889999999999999999998888999999998665556678999999999999999999999875443 7899
Q ss_pred EeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEeec
Q 039533 706 VYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVGDF 785 (949)
Q Consensus 706 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~Df 785 (949)
+|||+++++|.+++.. ....+++.++..++.|++.|++|||+. +++||||||+||++++++.+||+||
T Consensus 78 ~~e~~~~~~l~~~~~~---------~~~~l~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~d~ 145 (262)
T cd06613 78 VMEYCGGGSLQDIYQV---------TRGPLSELQIAYVCRETLKGLAYLHET---GKIHRDIKGANILLTEDGDVKLADF 145 (262)
T ss_pred EEeCCCCCcHHHHHHh---------hccCCCHHHHHHHHHHHHHHHHHHHhC---CceecCCChhhEEECCCCCEEECcc
Confidence 9999999999999862 124588999999999999999999977 8999999999999999999999999
Q ss_pred ccceecCCCCCccccccccCccCccCccccCCC---ccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhccccCC
Q 039533 786 GLARILSPDHTQTSSFSVKGSLGYIAPEYGVGC---EVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKALP 862 (949)
Q Consensus 786 G~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~ 862 (949)
|.+......... .....++..|+|||...+. .++.++|||||||++|||++|+.||...........
T Consensus 146 g~~~~~~~~~~~--~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~~~~-------- 215 (262)
T cd06613 146 GVSAQLTATIAK--RKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRALFL-------- 215 (262)
T ss_pred ccchhhhhhhhc--cccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHH--------
Confidence 998765432211 1134588899999998776 789999999999999999999999864321110000
Q ss_pred CchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 039533 863 DDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVH 926 (949)
Q Consensus 863 ~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 926 (949)
......... ........+..+.+++.+|+..+|++|||+.||+.
T Consensus 216 -----~~~~~~~~~---------------~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 259 (262)
T cd06613 216 -----ISKSNFPPP---------------KLKDKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQ 259 (262)
T ss_pred -----HHhccCCCc---------------cccchhhhhHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 000000000 00011234567889999999999999999999875
No 210
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=100.00 E-value=1.2e-34 Score=313.38 Aligned_cols=258 Identities=25% Similarity=0.436 Sum_probs=202.6
Q ss_pred cCCCCCCeeeeecCceEEEEEEcCCCE----EEEEEEEecCCC-cchHHHHHHHHHHHhcCCCcceeEEeeeecccccCC
Q 039533 626 SGFSSANLVGVGSFGSVYKGIIDEGRT----TIAVKVFNLQHH-GASRSFIAECKALKSIRHRNLVKVLTACLGADYRGN 700 (949)
Q Consensus 626 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~----~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 700 (949)
.+|++.+.||+|+||.||+|.+..+++ .||+|+...... .....+.+|+.++++++||||+++++++..
T Consensus 7 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~------ 80 (279)
T cd05057 7 TELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLS------ 80 (279)
T ss_pred HHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec------
Confidence 568889999999999999999865543 689998865433 234678899999999999999999999864
Q ss_pred ccceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCce
Q 039533 701 DFKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTA 780 (949)
Q Consensus 701 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~ 780 (949)
...++||||+++|+|.+++.. ....+++..+..++.|++.|++|||++ +++||||||+||++++++.+
T Consensus 81 ~~~~~v~e~~~~g~L~~~l~~---------~~~~~~~~~~~~~~~qi~~~l~~LH~~---~i~H~di~p~nil~~~~~~~ 148 (279)
T cd05057 81 SQVQLITQLMPLGCLLDYVRN---------HKDNIGSQYLLNWCVQIAKGMSYLEEK---RLVHRDLAARNVLVKTPQHV 148 (279)
T ss_pred CceEEEEecCCCCcHHHHHHh---------ccCCCCHHHHHHHHHHHHHHHHHHHhC---CEEecccCcceEEEcCCCeE
Confidence 268999999999999999862 223489999999999999999999976 99999999999999999999
Q ss_pred EEeecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHh-CCCCCccccccCchhhhhccc
Q 039533 781 RVGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVI-GKKPIDIMFEGDINLHNFGRK 859 (949)
Q Consensus 781 kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~ellt-g~~Pf~~~~~~~~~~~~~~~~ 859 (949)
||+|||.++...............++..|+|||......++.++||||||+++||+++ |+.||+.....+ .
T Consensus 149 kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~--~------ 220 (279)
T cd05057 149 KITDFGLAKLLDVDEKEYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPAVE--I------ 220 (279)
T ss_pred EECCCcccccccCcccceecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCHHH--H------
Confidence 9999999987654332221112224578999999988889999999999999999999 999986432111 1
Q ss_pred cCCCchhhhcccC-CCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHHhHHh
Q 039533 860 ALPDDVMDIVDSS-LLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHELQSIKNI 934 (949)
Q Consensus 860 ~~~~~~~~~~d~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~~~ 934 (949)
.+.+... ..+.+ ..+...+.+++.+||..+|++||++.++++.++++.+.
T Consensus 221 ------~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~~l~~~~~~ 271 (279)
T cd05057 221 ------PDLLEKGERLPQP-------------------PICTIDVYMVLVKCWMIDAESRPTFKELINEFSKMARD 271 (279)
T ss_pred ------HHHHhCCCCCCCC-------------------CCCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhC
Confidence 1111100 00000 01234578899999999999999999999999998654
No 211
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=100.00 E-value=2e-35 Score=331.33 Aligned_cols=202 Identities=24% Similarity=0.318 Sum_probs=172.7
Q ss_pred cCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCC---CcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCcc
Q 039533 626 SGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQH---HGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDF 702 (949)
Q Consensus 626 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 702 (949)
++|++.+.||+|+||.||+|+...+++.||+|+++... ......+.+|+.++.+++||+|+++++++.+.+ .
T Consensus 1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~-----~ 75 (360)
T cd05627 1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKR-----N 75 (360)
T ss_pred CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCC-----E
Confidence 46888999999999999999999889999999997432 233457888999999999999999999875444 7
Q ss_pred ceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEE
Q 039533 703 KASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARV 782 (949)
Q Consensus 703 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl 782 (949)
.++||||+++|+|.+++. ....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||
T Consensus 76 ~~lv~E~~~gg~L~~~l~----------~~~~l~~~~~~~~~~qi~~~L~~lH~~---givHrDLkp~NIli~~~~~vkL 142 (360)
T cd05627 76 LYLIMEFLPGGDMMTLLM----------KKDTLSEEATQFYIAETVLAIDAIHQL---GFIHRDIKPDNLLLDAKGHVKL 142 (360)
T ss_pred EEEEEeCCCCccHHHHHH----------hcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEccCCCHHHEEECCCCCEEE
Confidence 899999999999999986 234588999999999999999999977 9999999999999999999999
Q ss_pred eecccceecCCCCC---------------------------------ccccccccCccCccCccccCCCccCCccchHHH
Q 039533 783 GDFGLARILSPDHT---------------------------------QTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSY 829 (949)
Q Consensus 783 ~DfG~a~~~~~~~~---------------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSl 829 (949)
+|||+++....... ........||+.|+|||++.+..++.++|||||
T Consensus 143 ~DfG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSl 222 (360)
T cd05627 143 SDFGLCTGLKKAHRTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSL 222 (360)
T ss_pred eeccCCcccccccccccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccc
Confidence 99999875432110 000113469999999999999999999999999
Q ss_pred HHHHHHHHhCCCCCcc
Q 039533 830 GILLLELVIGKKPIDI 845 (949)
Q Consensus 830 Gvvl~elltg~~Pf~~ 845 (949)
||++|||++|+.||..
T Consensus 223 Gvilyel~tG~~Pf~~ 238 (360)
T cd05627 223 GVIMYEMLIGYPPFCS 238 (360)
T ss_pred cceeeecccCCCCCCC
Confidence 9999999999999964
No 212
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=100.00 E-value=2.9e-35 Score=324.79 Aligned_cols=238 Identities=24% Similarity=0.242 Sum_probs=184.1
Q ss_pred CeeeeecCceEEEEEEcCCCEEEEEEEEecCC---CcchHHHHHHHH-HHHhcCCCcceeEEeeeecccccCCccceeEe
Q 039533 632 NLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQH---HGASRSFIAECK-ALKSIRHRNLVKVLTACLGADYRGNDFKASVY 707 (949)
Q Consensus 632 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~-~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~ 707 (949)
++||+|+||.||+|++..+++.||+|++.... ......+..|.. +++.++||||+++++++...+ ..++||
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~-----~~~lv~ 75 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAE-----KLYFVL 75 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCC-----EEEEEE
Confidence 47999999999999999899999999987432 122334555554 578889999999998875444 789999
Q ss_pred eeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEeeccc
Q 039533 708 EFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVGDFGL 787 (949)
Q Consensus 708 e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~DfG~ 787 (949)
||+++++|.+++. ....+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 76 e~~~~~~L~~~l~----------~~~~~~~~~~~~~~~qi~~~L~~lH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~ 142 (321)
T cd05603 76 DYVNGGELFFHLQ----------RERCFLEPRARFYAAEVASAIGYLHSL---NIIYRDLKPENILLDSQGHVVLTDFGL 142 (321)
T ss_pred cCCCCCCHHHHHH----------HcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEccCCC
Confidence 9999999998885 234578889999999999999999977 999999999999999999999999999
Q ss_pred ceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhccccCCCchhh
Q 039533 788 ARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKALPDDVMD 867 (949)
Q Consensus 788 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~ 867 (949)
++........ .....||+.|+|||++.+..++.++|||||||++|||++|+.||...... ... ..
T Consensus 143 ~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~-----~~~--------~~ 207 (321)
T cd05603 143 CKEGVEPEET--TSTFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDVS-----QMY--------DN 207 (321)
T ss_pred CccCCCCCCc--cccccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCCHH-----HHH--------HH
Confidence 8753222211 12345899999999999888999999999999999999999999532110 000 00
Q ss_pred hcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHH
Q 039533 868 IVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMT 922 (949)
Q Consensus 868 ~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ 922 (949)
+....... + ......+.+++.+|++.||++||++.
T Consensus 208 i~~~~~~~-~-------------------~~~~~~~~~li~~~l~~~p~~R~~~~ 242 (321)
T cd05603 208 ILHKPLQL-P-------------------GGKTVAACDLLVGLLHKDQRRRLGAK 242 (321)
T ss_pred HhcCCCCC-C-------------------CCCCHHHHHHHHHHccCCHhhcCCCC
Confidence 11000000 0 01234578899999999999999864
No 213
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=100.00 E-value=1.3e-34 Score=311.43 Aligned_cols=257 Identities=22% Similarity=0.330 Sum_probs=188.7
Q ss_pred CeeeeecCceEEEEEEcC--CCEEEEEEEEecCCC-cchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCccceeEee
Q 039533 632 NLVGVGSFGSVYKGIIDE--GRTTIAVKVFNLQHH-GASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFKASVYE 708 (949)
Q Consensus 632 ~~lg~G~~g~Vy~~~~~~--~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e 708 (949)
+.||+|+||.||+|.... ++..+|+|.++.... .....+.+|+.++++++||||+++++++.+.. ..++|||
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-----~~~lv~e 75 (269)
T cd05087 1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVT-----PYLLVME 75 (269)
T ss_pred CcccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCC-----CcEEEEE
Confidence 468999999999998653 346799998865443 23357889999999999999999999876544 6899999
Q ss_pred eccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEeecccc
Q 039533 709 FMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVGDFGLA 788 (949)
Q Consensus 709 ~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~DfG~a 788 (949)
|+++|+|.+++...... .....++..+..++.|++.|++|||+. +++||||||+||++++++.+||+|||.+
T Consensus 76 ~~~~g~L~~~l~~~~~~-----~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dlkp~nil~~~~~~~kL~dfg~~ 147 (269)
T cd05087 76 FCPLGDLKGYLRSCRKA-----ELMTPDPTTLQRMACEIALGLLHLHKN---NFIHSDLALRNCLLTADLTVKIGDYGLS 147 (269)
T ss_pred CCCCCcHHHHHHHhhhc-----ccccccHHHHHHHHHHHHHHHHHHHHC---CEeccccCcceEEEcCCCcEEECCcccc
Confidence 99999999999632111 123467778889999999999999977 8999999999999999999999999999
Q ss_pred eecCCCCCccccccccCccCccCccccCCC-------ccCCccchHHHHHHHHHHHh-CCCCCccccccCchhhhhcccc
Q 039533 789 RILSPDHTQTSSFSVKGSLGYIAPEYGVGC-------EVSTNGDVYSYGILLLELVI-GKKPIDIMFEGDINLHNFGRKA 860 (949)
Q Consensus 789 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-------~~~~~sDiwSlGvvl~ellt-g~~Pf~~~~~~~~~~~~~~~~~ 860 (949)
+...............++..|+|||++.+. .++.++||||||+++|||++ |+.||......+.. ...
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~--~~~--- 222 (269)
T cd05087 148 HNKYKEDYYVTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQVL--TYT--- 222 (269)
T ss_pred ccccCcceeecCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHHHH--HHH---
Confidence 765433322222234478889999987642 35789999999999999996 99999643222110 000
Q ss_pred CCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHH
Q 039533 861 LPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHELQ 929 (949)
Q Consensus 861 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~ 929 (949)
.........++.+.. ..+..+.+++..|+ .+|++|||++||.+.|+
T Consensus 223 ~~~~~~~~~~~~~~~----------------------~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~~l~ 268 (269)
T cd05087 223 VREQQLKLPKPRLKL----------------------PLSDRWYEVMQFCW-LQPEQRPSAEEVHLLLS 268 (269)
T ss_pred hhcccCCCCCCccCC----------------------CCChHHHHHHHHHh-cCcccCCCHHHHHHHhc
Confidence 000000111111100 12335677888998 58999999999998874
No 214
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=100.00 E-value=1.4e-34 Score=309.43 Aligned_cols=253 Identities=24% Similarity=0.409 Sum_probs=199.6
Q ss_pred cCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCCcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCcccee
Q 039533 626 SGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFKAS 705 (949)
Q Consensus 626 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 705 (949)
++|++.++||+|+||.||+|... +++.||+|.+..... ...++.+|+.++++++|+||+++++++.. +..++
T Consensus 6 ~~~~~~~~ig~G~~g~v~~~~~~-~~~~~a~K~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~------~~~~~ 77 (260)
T cd05067 6 ETLKLVKKLGAGQFGEVWMGYYN-GHTKVAIKSLKQGSM-SPEAFLAEANLMKQLQHPRLVRLYAVVTQ------EPIYI 77 (260)
T ss_pred HHceeeeeeccCccceEEeeecC-CCceEEEEEecCCCC-cHHHHHHHHHHHHhcCCcCeeeEEEEEcc------CCcEE
Confidence 56889999999999999999976 578899999874433 34678999999999999999999987532 25799
Q ss_pred EeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEeec
Q 039533 706 VYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVGDF 785 (949)
Q Consensus 706 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~Df 785 (949)
||||+++++|.+++... ....+++.++..++.|++.||+|||+. +++||||||+||++++++.++|+||
T Consensus 78 v~e~~~~~~L~~~~~~~--------~~~~~~~~~~~~i~~~i~~al~~LH~~---~i~H~dl~p~ni~i~~~~~~~l~df 146 (260)
T cd05067 78 ITEYMENGSLVDFLKTP--------EGIKLTINKLIDMAAQIAEGMAFIERK---NYIHRDLRAANILVSETLCCKIADF 146 (260)
T ss_pred EEEcCCCCCHHHHHHhc--------CCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecccccHHhEEEcCCCCEEEccC
Confidence 99999999999998621 234588999999999999999999976 8999999999999999999999999
Q ss_pred ccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHh-CCCCCccccccCchhhhhccccCCCc
Q 039533 786 GLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVI-GKKPIDIMFEGDINLHNFGRKALPDD 864 (949)
Q Consensus 786 G~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~ 864 (949)
|.+.......... .....++..|+|||++.+..++.++||||||+++||+++ |+.||...... ....
T Consensus 147 g~~~~~~~~~~~~-~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~--~~~~--------- 214 (260)
T cd05067 147 GLARLIEDNEYTA-REGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNP--EVIQ--------- 214 (260)
T ss_pred cceeecCCCCccc-ccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCChH--HHHH---------
Confidence 9998765322211 112346778999999988889999999999999999999 99998633211 0100
Q ss_pred hhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHH
Q 039533 865 VMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHELQS 930 (949)
Q Consensus 865 ~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~ 930 (949)
.+...... +.....+.++.+++.+|++.+|++||+++++.+.|+.
T Consensus 215 ---~~~~~~~~------------------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 259 (260)
T cd05067 215 ---NLERGYRM------------------PRPDNCPEELYELMRLCWKEKPEERPTFEYLRSVLED 259 (260)
T ss_pred ---HHHcCCCC------------------CCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHhhc
Confidence 00000000 0001234568999999999999999999999999875
No 215
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=100.00 E-value=1.3e-34 Score=315.29 Aligned_cols=252 Identities=23% Similarity=0.254 Sum_probs=198.2
Q ss_pred cCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCCcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCcccee
Q 039533 626 SGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFKAS 705 (949)
Q Consensus 626 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 705 (949)
+.|++.+.||.|+||.||+|++..+++.||+|++........+.+.+|+.++++++||||+++++++.... ..++
T Consensus 12 ~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-----~~~l 86 (292)
T cd06644 12 EVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAFYWDG-----KLWI 86 (292)
T ss_pred hhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCC-----eEEE
Confidence 56899999999999999999999889999999998666555678899999999999999999999876443 7899
Q ss_pred EeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEeec
Q 039533 706 VYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVGDF 785 (949)
Q Consensus 706 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~Df 785 (949)
||||+++++|..++.. ....+++..+..++.|++.|++|||+. +++||||||+||+++.++.+||+||
T Consensus 87 v~e~~~~~~l~~~~~~---------~~~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~df 154 (292)
T cd06644 87 MIEFCPGGAVDAIMLE---------LDRGLTEPQIQVICRQMLEALQYLHSM---KIIHRDLKAGNVLLTLDGDIKLADF 154 (292)
T ss_pred EEecCCCCcHHHHHHh---------hcCCCCHHHHHHHHHHHHHHHHHHhcC---CeeecCCCcceEEEcCCCCEEEccC
Confidence 9999999999888752 234588999999999999999999976 9999999999999999999999999
Q ss_pred ccceecCCCCCccccccccCccCccCccccC-----CCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhcccc
Q 039533 786 GLARILSPDHTQTSSFSVKGSLGYIAPEYGV-----GCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKA 860 (949)
Q Consensus 786 G~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~ 860 (949)
|.+......... .....++..|+|||++. ...++.++|||||||++|||++|+.||....... .....
T Consensus 155 g~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~-~~~~~---- 227 (292)
T cd06644 155 GVSAKNVKTLQR--RDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMR-VLLKI---- 227 (292)
T ss_pred ccceeccccccc--cceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHHH-HHHHH----
Confidence 998764332211 11345888999999874 3456889999999999999999999985321110 00000
Q ss_pred CCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 039533 861 LPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVH 926 (949)
Q Consensus 861 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 926 (949)
.... .+.. ......+..+.+++.+|++.+|++||++.|+++
T Consensus 228 --------~~~~-~~~~----------------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 268 (292)
T cd06644 228 --------AKSE-PPTL----------------SQPSKWSMEFRDFLKTALDKHPETRPSAAQLLE 268 (292)
T ss_pred --------hcCC-CccC----------------CCCcccCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 0000 0000 000123445788999999999999999999975
No 216
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=6.4e-36 Score=324.57 Aligned_cols=247 Identities=23% Similarity=0.372 Sum_probs=197.2
Q ss_pred CCCeeeeecCceEEEEEEcCCCEEEEEEEEe----cCCCcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCcccee
Q 039533 630 SANLVGVGSFGSVYKGIIDEGRTTIAVKVFN----LQHHGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFKAS 705 (949)
Q Consensus 630 ~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~----~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 705 (949)
...+||+|+|-+||+|.+..+|..||--.++ .+.....++|..|+.+|+.++||||+++|+++.+.. ....-+
T Consensus 44 ~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~---n~~in~ 120 (632)
T KOG0584|consen 44 FDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTD---NKTINF 120 (632)
T ss_pred hhhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCC---Cceeee
Confidence 4568999999999999999888888764443 123334578999999999999999999999987655 245778
Q ss_pred EeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeec-CCCceEEee
Q 039533 706 VYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLD-DYMTARVGD 784 (949)
Q Consensus 706 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~-~~~~~kl~D 784 (949)
|+|.+..|+|..|.++ .+.++......|++||++||.|||++ .|+|+|||||-+||+|+ ..|.|||+|
T Consensus 121 iTEL~TSGtLr~Y~kk----------~~~vn~kaik~W~RQILkGL~yLHs~-~PPIIHRDLKCDNIFinG~~G~VKIGD 189 (632)
T KOG0584|consen 121 ITELFTSGTLREYRKK----------HRRVNIKAIKSWCRQILKGLVYLHSQ-DPPIIHRDLKCDNIFVNGNLGEVKIGD 189 (632)
T ss_pred eeecccCCcHHHHHHH----------hccCCHHHHHHHHHHHHHHhhhhhcC-CCCccccccccceEEEcCCcCceeecc
Confidence 9999999999999973 45678889999999999999999999 89999999999999997 568999999
Q ss_pred cccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhccccCCCc
Q 039533 785 FGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKALPDD 864 (949)
Q Consensus 785 fG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~ 864 (949)
+|+|......... .+.|||.|||||+.. ..|++.+||||||+++.||+|+.+||.........+.+-.....|..
T Consensus 190 LGLAtl~r~s~ak----svIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~AQIYKKV~SGiKP~s 264 (632)
T KOG0584|consen 190 LGLATLLRKSHAK----SVIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYSECTNPAQIYKKVTSGIKPAA 264 (632)
T ss_pred hhHHHHhhccccc----eeccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhccCChhhhCCHHHHHHHHHcCCCHHH
Confidence 9999987654432 367999999999987 68999999999999999999999999644322211111111111111
Q ss_pred hhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 039533 865 VMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVH 926 (949)
Q Consensus 865 ~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 926 (949)
+..+- -+++.++|.+|+.. ..+|||+.|++.
T Consensus 265 l~kV~------------------------------dPevr~fIekCl~~-~~~R~sa~eLL~ 295 (632)
T KOG0584|consen 265 LSKVK------------------------------DPEVREFIEKCLAT-KSERLSAKELLK 295 (632)
T ss_pred hhccC------------------------------CHHHHHHHHHHhcC-chhccCHHHHhh
Confidence 11111 23578999999999 999999999975
No 217
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=100.00 E-value=1.3e-34 Score=309.87 Aligned_cols=257 Identities=26% Similarity=0.410 Sum_probs=201.4
Q ss_pred CeeeeecCceEEEEEEcCC---CEEEEEEEEecCCCcc-hHHHHHHHHHHHhcCCCcceeEEeeeecccccCCccceeEe
Q 039533 632 NLVGVGSFGSVYKGIIDEG---RTTIAVKVFNLQHHGA-SRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFKASVY 707 (949)
Q Consensus 632 ~~lg~G~~g~Vy~~~~~~~---~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~ 707 (949)
+.||+|+||.||+|..... +..||+|+++...... .+.+.+|++.+++++|+||+++++++... ...++||
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-----~~~~lv~ 75 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTEE-----EPLYLVL 75 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeecCC-----CceEEEE
Confidence 4799999999999999865 8899999997654433 57889999999999999999999997653 3789999
Q ss_pred eeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEeeccc
Q 039533 708 EFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVGDFGL 787 (949)
Q Consensus 708 e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~DfG~ 787 (949)
||+++++|.+++....... .......+++.++..++.|++.|++|||++ +++||||||+||++++++.+||+|||.
T Consensus 76 e~~~~~~L~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~di~p~nili~~~~~~~l~dfg~ 151 (262)
T cd00192 76 EYMEGGDLLDYLRKSRPVF-PSPEKSTLSLKDLLSFAIQIAKGMEYLASK---KFVHRDLAARNCLVGEDLVVKISDFGL 151 (262)
T ss_pred EeccCCcHHHHHhhccccc-cccccccCCHHHHHHHHHHHHHHHHHHHcC---CcccCccCcceEEECCCCcEEEccccc
Confidence 9999999999997321110 001136689999999999999999999976 999999999999999999999999999
Q ss_pred ceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHh-CCCCCccccccCchhhhhccccCCCchh
Q 039533 788 ARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVI-GKKPIDIMFEGDINLHNFGRKALPDDVM 866 (949)
Q Consensus 788 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~ 866 (949)
+................++..|+|||......++.++||||+|+++|||++ |..||...... ....
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~--~~~~----------- 218 (262)
T cd00192 152 SRDVYDDDYYRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSNE--EVLE----------- 218 (262)
T ss_pred ccccccccccccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCHH--HHHH-----------
Confidence 987765432222223457889999999988889999999999999999999 69998643111 0000
Q ss_pred hhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHH
Q 039533 867 DIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHELQ 929 (949)
Q Consensus 867 ~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~ 929 (949)
.+.+.... ......+.++.+++.+|++.+|++|||+.|+++.|+
T Consensus 219 ~~~~~~~~-------------------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~ 262 (262)
T cd00192 219 YLRKGYRL-------------------PKPEYCPDELYELMLSCWQLDPEDRPTFSELVERLE 262 (262)
T ss_pred HHHcCCCC-------------------CCCccCChHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence 00000000 001133567889999999999999999999998873
No 218
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=100.00 E-value=1.7e-34 Score=310.15 Aligned_cols=250 Identities=25% Similarity=0.346 Sum_probs=197.5
Q ss_pred CCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCCcc---------hHHHHHHHHHHHhcCCCcceeEEeeeecccc
Q 039533 627 GFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHGA---------SRSFIAECKALKSIRHRNLVKVLTACLGADY 697 (949)
Q Consensus 627 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~---------~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 697 (949)
+|.+.+.||+|++|.||+|.+..+++.||+|++....... .+.+.+|+.++++++||||+++++++...+
T Consensus 1 ~~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~- 79 (267)
T cd06628 1 KWIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDAD- 79 (267)
T ss_pred CccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCC-
Confidence 4788899999999999999998888999999986443221 246788999999999999999999976544
Q ss_pred cCCccceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCC
Q 039533 698 RGNDFKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDY 777 (949)
Q Consensus 698 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~ 777 (949)
..++||||+++++|.+++.. ...+++..+..++.|++.||+|||+. +++||||+|+||+++++
T Consensus 80 ----~~~lv~e~~~~~~L~~~l~~----------~~~l~~~~~~~~~~~l~~~l~~lH~~---~ivH~di~p~nil~~~~ 142 (267)
T cd06628 80 ----HLNIFLEYVPGGSVAALLNN----------YGAFEETLVRNFVRQILKGLNYLHNR---GIIHRDIKGANILVDNK 142 (267)
T ss_pred ----ccEEEEEecCCCCHHHHHHh----------ccCccHHHHHHHHHHHHHHHHHHHhc---CcccccCCHHHEEEcCC
Confidence 78999999999999999962 24578889999999999999999977 89999999999999999
Q ss_pred CceEEeecccceecCCCCCcc----ccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccccccCchh
Q 039533 778 MTARVGDFGLARILSPDHTQT----SSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINL 853 (949)
Q Consensus 778 ~~~kl~DfG~a~~~~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~ 853 (949)
+.+||+|||.++......... ......|+..|+|||.+.+..++.++||||+||++|||++|+.||....... ..
T Consensus 143 ~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~-~~ 221 (267)
T cd06628 143 GGIKISDFGISKKLEANSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQLQ-AI 221 (267)
T ss_pred CCEEecccCCCcccccccccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccHHH-HH
Confidence 999999999998765322111 1112347889999999988889999999999999999999999996431110 00
Q ss_pred hhhccccCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 039533 854 HNFGRKALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVH 926 (949)
Q Consensus 854 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 926 (949)
........... ....+..+.+++.+||+.||++||++.||++
T Consensus 222 ------------~~~~~~~~~~~-------------------~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 263 (267)
T cd06628 222 ------------FKIGENASPEI-------------------PSNISSEAIDFLEKTFEIDHNKRPTAAELLK 263 (267)
T ss_pred ------------HHHhccCCCcC-------------------CcccCHHHHHHHHHHccCCchhCcCHHHHhh
Confidence 00000000000 0123456788999999999999999999875
No 219
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=100.00 E-value=1.3e-34 Score=309.12 Aligned_cols=250 Identities=23% Similarity=0.333 Sum_probs=201.8
Q ss_pred cCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCCcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCcccee
Q 039533 626 SGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFKAS 705 (949)
Q Consensus 626 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 705 (949)
++|++.+.||+|+||.||+|....+++.||+|.++.... .+++.+|++++++++||||+++++++.... ..++
T Consensus 3 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~-----~~~l 75 (256)
T cd06612 3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED--LQEIIKEISILKQCDSPYIVKYYGSYFKNT-----DLWI 75 (256)
T ss_pred ccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH--HHHHHHHHHHHHhCCCCcEeeeeeeeecCC-----cEEE
Confidence 578999999999999999999988789999999875432 578999999999999999999999976544 7899
Q ss_pred EeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEeec
Q 039533 706 VYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVGDF 785 (949)
Q Consensus 706 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~Df 785 (949)
++||+++++|.+++.. ....+++..+..++.|++.|+.|||+. +++||||+|+||+++.++.+||+||
T Consensus 76 ~~e~~~~~~L~~~l~~---------~~~~l~~~~~~~~~~~l~~~l~~lh~~---~i~H~dl~~~ni~~~~~~~~~l~df 143 (256)
T cd06612 76 VMEYCGAGSVSDIMKI---------TNKTLTEEEIAAILYQTLKGLEYLHSN---KKIHRDIKAGNILLNEEGQAKLADF 143 (256)
T ss_pred EEecCCCCcHHHHHHh---------CccCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEECCCCcEEEccc
Confidence 9999999999999862 235689999999999999999999977 8999999999999999999999999
Q ss_pred ccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhccccCCCch
Q 039533 786 GLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKALPDDV 865 (949)
Q Consensus 786 G~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~ 865 (949)
|.+......... .....++..|+|||++.+..++.++||||||+++|||++|+.||...........
T Consensus 144 g~~~~~~~~~~~--~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~~~----------- 210 (256)
T cd06612 144 GVSGQLTDTMAK--RNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAIFM----------- 210 (256)
T ss_pred ccchhcccCccc--cccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhhhhh-----------
Confidence 999876543321 1134488999999999988899999999999999999999999864322110000
Q ss_pred hhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 039533 866 MDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVH 926 (949)
Q Consensus 866 ~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 926 (949)
....... .+.........+.+++.+|++.+|++|||+.||++
T Consensus 211 ---~~~~~~~----------------~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~il~ 252 (256)
T cd06612 211 ---IPNKPPP----------------TLSDPEKWSPEFNDFVKKCLVKDPEERPSAIQLLQ 252 (256)
T ss_pred ---hccCCCC----------------CCCchhhcCHHHHHHHHHHHhcChhhCcCHHHHhc
Confidence 0000000 00011123456889999999999999999999975
No 220
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=100.00 E-value=1.7e-34 Score=310.69 Aligned_cols=258 Identities=25% Similarity=0.367 Sum_probs=194.2
Q ss_pred CeeeeecCceEEEEEEcCCCE--EEEEEEEecCC-CcchHHHHHHHHHHHhc-CCCcceeEEeeeecccccCCccceeEe
Q 039533 632 NLVGVGSFGSVYKGIIDEGRT--TIAVKVFNLQH-HGASRSFIAECKALKSI-RHRNLVKVLTACLGADYRGNDFKASVY 707 (949)
Q Consensus 632 ~~lg~G~~g~Vy~~~~~~~~~--~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~~lv~ 707 (949)
+.||+|+||.||+|++..++. .+|+|.++... ....+.+.+|+++++++ +||||+++++++...+ ..++||
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~-----~~~lv~ 75 (270)
T cd05047 1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRG-----YLYLAI 75 (270)
T ss_pred CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCC-----CceEEE
Confidence 468999999999999976664 46888876432 23346788999999999 7999999999976544 689999
Q ss_pred eeccCCChhhhcCCCCCCCc------cccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceE
Q 039533 708 EFMHYGSLEEWLHPFTGEDE------IDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTAR 781 (949)
Q Consensus 708 e~~~~gsL~~~l~~~~~~~~------~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~k 781 (949)
||+++|+|.+++........ .......+++.++..++.|++.|++|||+. +++||||||+||++++++.+|
T Consensus 76 e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~---~i~H~dikp~nili~~~~~~k 152 (270)
T cd05047 76 EYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYVAK 152 (270)
T ss_pred EeCCCCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccccceEEEcCCCeEE
Confidence 99999999999974321100 011234588999999999999999999976 999999999999999999999
Q ss_pred EeecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHh-CCCCCccccccCchhhhhcccc
Q 039533 782 VGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVI-GKKPIDIMFEGDINLHNFGRKA 860 (949)
Q Consensus 782 l~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~ellt-g~~Pf~~~~~~~~~~~~~~~~~ 860 (949)
|+|||++....... .......+..|+|||++.+..++.++|||||||++|||++ |+.||......+ .
T Consensus 153 l~dfgl~~~~~~~~---~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~--~------- 220 (270)
T cd05047 153 IADFGLSRGQEVYV---KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAE--L------- 220 (270)
T ss_pred ECCCCCccccchhh---hccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCHHH--H-------
Confidence 99999986322111 1111224567999999988889999999999999999997 999985321110 0
Q ss_pred CCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHHhH
Q 039533 861 LPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHELQSIK 932 (949)
Q Consensus 861 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~ 932 (949)
.+.+...... +.....+..+.+++.+|++.+|.+|||+.|++..|+++.
T Consensus 221 -----~~~~~~~~~~------------------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~~~~ 269 (270)
T cd05047 221 -----YEKLPQGYRL------------------EKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRML 269 (270)
T ss_pred -----HHHHhCCCCC------------------CCCCcCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHhh
Confidence 0000000000 000123346789999999999999999999999998874
No 221
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=100.00 E-value=2e-34 Score=308.23 Aligned_cols=253 Identities=26% Similarity=0.412 Sum_probs=197.9
Q ss_pred cCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCCcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCcccee
Q 039533 626 SGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFKAS 705 (949)
Q Consensus 626 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 705 (949)
++|.+.+.||+|++|.||+|.+.. +..||+|++.... ...+.+.+|++++++++|+|++++++++.. ...++
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~-~~~~~lK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~------~~~~~ 77 (260)
T cd05069 6 ESLRLDVKLGQGCFGEVWMGTWNG-TTKVAIKTLKPGT-MMPEAFLQEAQIMKKLRHDKLVPLYAVVSE------EPIYI 77 (260)
T ss_pred HHeeeeeeecCcCCCeEEEEEEcC-CceEEEEEcccCC-ccHHHHHHHHHHHHhCCCCCeeeEEEEEcC------CCcEE
Confidence 468889999999999999999874 4569999876433 234678899999999999999999987632 25789
Q ss_pred EeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEeec
Q 039533 706 VYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVGDF 785 (949)
Q Consensus 706 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~Df 785 (949)
||||+++++|.+++... ....+++..+..++.|++.||+|||+. +++||||||+||++++++.++|+||
T Consensus 78 v~e~~~~~~L~~~~~~~--------~~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~dl~~~Nill~~~~~~~l~df 146 (260)
T cd05069 78 VTEFMGKGSLLDFLKEG--------DGKYLKLPQLVDMAAQIADGMAYIERM---NYIHRDLRAANILVGDNLVCKIADF 146 (260)
T ss_pred EEEcCCCCCHHHHHhhC--------CCCCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccCcceEEEcCCCeEEECCC
Confidence 99999999999999631 223478999999999999999999976 8999999999999999999999999
Q ss_pred ccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHh-CCCCCccccccCchhhhhccccCCCc
Q 039533 786 GLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVI-GKKPIDIMFEGDINLHNFGRKALPDD 864 (949)
Q Consensus 786 G~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~ 864 (949)
|.+......... ......++..|+|||+..+..++.++||||||+++|||++ |+.||....... ....
T Consensus 147 g~~~~~~~~~~~-~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~--~~~~-------- 215 (260)
T cd05069 147 GLARLIEDNEYT-ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNRE--VLEQ-------- 215 (260)
T ss_pred ccceEccCCccc-ccCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHHH--HHHH--------
Confidence 999876443221 1112346778999999988889999999999999999999 899986332110 0000
Q ss_pred hhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHH
Q 039533 865 VMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHELQS 930 (949)
Q Consensus 865 ~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~ 930 (949)
+...... +.....+..+.+++.+|++.+|++||++++|.+.|++
T Consensus 216 ----~~~~~~~------------------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 259 (260)
T cd05069 216 ----VERGYRM------------------PCPQGCPESLHELMKLCWKKDPDERPTFEYIQSFLED 259 (260)
T ss_pred ----HHcCCCC------------------CCCcccCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence 0000000 0001335668899999999999999999999999875
No 222
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=100.00 E-value=8.2e-35 Score=315.36 Aligned_cols=252 Identities=22% Similarity=0.272 Sum_probs=196.9
Q ss_pred CCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCC---cchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCccc
Q 039533 627 GFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHH---GASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFK 703 (949)
Q Consensus 627 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 703 (949)
.|+..+.||+|+||.||+|.+..+++.||+|.+..... ...+.+.+|+.++++++|++|+++++.+...+ ..
T Consensus 1 ~f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~-----~~ 75 (285)
T cd05630 1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKD-----AL 75 (285)
T ss_pred CceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCC-----EE
Confidence 36778899999999999999999999999999864322 22345778999999999999999998875444 78
Q ss_pred eeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEe
Q 039533 704 ASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVG 783 (949)
Q Consensus 704 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~ 783 (949)
++||||+++++|.+++... ....+++.++..++.|++.||+|||+. +|+||||||+||+++.++.++|+
T Consensus 76 ~lv~e~~~g~~L~~~l~~~--------~~~~l~~~~~~~~~~qi~~~l~~lH~~---~iiH~dikp~Nil~~~~~~~~l~ 144 (285)
T cd05630 76 CLVLTLMNGGDLKFHIYHM--------GEAGFEEGRAVFYAAEICCGLEDLHQE---RIVYRDLKPENILLDDHGHIRIS 144 (285)
T ss_pred EEEEEecCCCcHHHHHHHh--------cccCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHEEECCCCCEEEe
Confidence 9999999999999988521 123588999999999999999999976 99999999999999999999999
Q ss_pred ecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhccccCCC
Q 039533 784 DFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKALPD 863 (949)
Q Consensus 784 DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~ 863 (949)
|||++.......... ...|+..|+|||++.+..++.++||||+||++|||++|+.||....... ...
T Consensus 145 Dfg~~~~~~~~~~~~---~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~-~~~--------- 211 (285)
T cd05630 145 DLGLAVHVPEGQTIK---GRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKI-KRE--------- 211 (285)
T ss_pred eccceeecCCCcccc---CCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccc-hHH---------
Confidence 999997654332211 3458999999999998899999999999999999999999996431110 000
Q ss_pred chhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCC-----HHHHHH
Q 039533 864 DVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTN-----MTNVVH 926 (949)
Q Consensus 864 ~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs-----~~ev~~ 926 (949)
......+... . .........+.+++..|++.||++||| ++|+++
T Consensus 212 ~~~~~~~~~~-~------------------~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~ 260 (285)
T cd05630 212 EVERLVKEVQ-E------------------EYSEKFSPDARSLCKMLLCKDPKERLGCQGGGAREVKE 260 (285)
T ss_pred HHHhhhhhhh-h------------------hcCccCCHHHHHHHHHHhhcCHHHccCCCCCchHHHHc
Confidence 0000000000 0 000122345789999999999999999 888876
No 223
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-34 Score=316.93 Aligned_cols=251 Identities=24% Similarity=0.263 Sum_probs=204.9
Q ss_pred hcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCCc---chHHHHHHHHHHHhcC-CCcceeEEeeeecccccCC
Q 039533 625 TSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHG---ASRSFIAECKALKSIR-HRNLVKVLTACLGADYRGN 700 (949)
Q Consensus 625 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~ 700 (949)
...|.+.+.||+|.||.||+++.+.+|+.+|+|++.+.... ....+.+|+.+|+++. |||||.+++++....
T Consensus 34 ~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~---- 109 (382)
T KOG0032|consen 34 KEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPD---- 109 (382)
T ss_pred cccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCC----
Confidence 45688889999999999999999999999999999755443 3368999999999998 999999999965544
Q ss_pred ccceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecC----
Q 039533 701 DFKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDD---- 776 (949)
Q Consensus 701 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~---- 776 (949)
..++|||++.||.|.+.+... .+++.++..++.|++.|++|||+. ||+|||+||+|+|+..
T Consensus 110 -~~~lvmEL~~GGeLfd~i~~~-----------~~sE~da~~~~~~il~av~~lH~~---gvvHrDlKpEN~L~~~~~~~ 174 (382)
T KOG0032|consen 110 -SVYLVMELCEGGELFDRIVKK-----------HYSERDAAGIIRQILEAVKYLHSL---GVVHRDLKPENLLLASKDEG 174 (382)
T ss_pred -eEEEEEEecCCchHHHHHHHc-----------cCCHHHHHHHHHHHHHHHHHHHhC---CceeccCCHHHeeeccccCC
Confidence 899999999999999999621 389999999999999999999976 9999999999999963
Q ss_pred CCceEEeecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhh
Q 039533 777 YMTARVGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNF 856 (949)
Q Consensus 777 ~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~ 856 (949)
++.+|++|||+|........ .....||+.|+|||++.+..|+..+||||+||++|.|++|.+||....+.....
T Consensus 175 ~~~ik~~DFGla~~~~~~~~---~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~--- 248 (382)
T KOG0032|consen 175 SGRIKLIDFGLAKFIKPGER---LHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFL--- 248 (382)
T ss_pred CCcEEEeeCCCceEccCCce---EeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHH---
Confidence 35799999999998877222 225679999999999999999999999999999999999999996443222111
Q ss_pred ccccCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 039533 857 GRKALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVH 926 (949)
Q Consensus 857 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 926 (949)
.+....... ... .+........+++..|+..||.+|+|+.++++
T Consensus 249 ----------~i~~~~~~f-------------~~~---~w~~is~~akd~i~~ll~~dp~~R~ta~~~L~ 292 (382)
T KOG0032|consen 249 ----------AILRGDFDF-------------TSE---PWDDISESAKDFIRKLLEFDPRKRLTAAQALQ 292 (382)
T ss_pred ----------HHHcCCCCC-------------CCC---CccccCHHHHHHHHHhcccCcccCCCHHHHhc
Confidence 111110000 001 11244566789999999999999999999998
No 224
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=100.00 E-value=1.5e-34 Score=313.39 Aligned_cols=251 Identities=22% Similarity=0.265 Sum_probs=195.0
Q ss_pred CCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCC---cchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCccce
Q 039533 628 FSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHH---GASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFKA 704 (949)
Q Consensus 628 y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 704 (949)
|+..+.||+|+||+||+|.+..+++.||+|++..... .....+.+|++++++++|+||+++.+++...+ ..+
T Consensus 2 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~-----~~~ 76 (285)
T cd05632 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKD-----ALC 76 (285)
T ss_pred ceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCC-----EEE
Confidence 6677899999999999999998999999999864432 22345778999999999999999998865443 789
Q ss_pred eEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEee
Q 039533 705 SVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVGD 784 (949)
Q Consensus 705 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~D 784 (949)
+||||+++++|.+++... ....+++..+..++.|++.||.|||+. +|+||||||+||++++++.+||+|
T Consensus 77 lv~e~~~~~~L~~~~~~~--------~~~~~~~~~~~~~~~ql~~~l~~lH~~---~iiH~dikp~Nili~~~~~~kl~D 145 (285)
T cd05632 77 LVLTIMNGGDLKFHIYNM--------GNPGFEEERALFYAAEILCGLEDLHRE---NTVYRDLKPENILLDDYGHIRISD 145 (285)
T ss_pred EEEEeccCccHHHHHHHh--------cCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCCHHHEEECCCCCEEEec
Confidence 999999999999888521 223589999999999999999999977 999999999999999999999999
Q ss_pred cccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhccccCCCc
Q 039533 785 FGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKALPDD 864 (949)
Q Consensus 785 fG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~ 864 (949)
||++......... ....|+..|+|||++.+..++.++|||||||++|||++|+.||....... .... ........
T Consensus 146 fg~~~~~~~~~~~---~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~-~~~~-~~~~~~~~ 220 (285)
T cd05632 146 LGLAVKIPEGESI---RGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKV-KREE-VDRRVLET 220 (285)
T ss_pred CCcceecCCCCcc---cCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHH-HHHH-HHHhhhcc
Confidence 9999765433221 13458999999999988889999999999999999999999996321110 0000 00000000
Q ss_pred hhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCC-----HHHHHH
Q 039533 865 VMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTN-----MTNVVH 926 (949)
Q Consensus 865 ~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs-----~~ev~~ 926 (949)
. .. .....+..+.+++..|++.||++||+ +.|+++
T Consensus 221 -------~-~~-------------------~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~ 260 (285)
T cd05632 221 -------E-EV-------------------YSAKFSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKR 260 (285)
T ss_pred -------c-cc-------------------cCccCCHHHHHHHHHHccCCHhHcCCCcccChHHHHc
Confidence 0 00 00123445788999999999999999 666665
No 225
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=100.00 E-value=1.9e-34 Score=313.15 Aligned_cols=271 Identities=22% Similarity=0.295 Sum_probs=200.2
Q ss_pred cCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCC--cchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCccc
Q 039533 626 SGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHH--GASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFK 703 (949)
Q Consensus 626 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 703 (949)
++|++.+.||+|++|.||+|.+..+++.||+|++..... ...+.+.+|+.++++++|||++++++++.... ..
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~-----~~ 75 (286)
T cd07847 1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKR-----KL 75 (286)
T ss_pred CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCC-----EE
Confidence 468899999999999999999998899999999864332 23356789999999999999999999976544 78
Q ss_pred eeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEe
Q 039533 704 ASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVG 783 (949)
Q Consensus 704 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~ 783 (949)
++||||++++.+..++. ....+++..++.++.|++.||+|||+. +++||||||+||+++.++.+||+
T Consensus 76 ~~v~e~~~~~~l~~~~~----------~~~~~~~~~~~~~~~ql~~~l~~LH~~---~i~H~dl~p~nil~~~~~~~~l~ 142 (286)
T cd07847 76 HLVFEYCDHTVLNELEK----------NPRGVPEHLIKKIIWQTLQAVNFCHKH---NCIHRDVKPENILITKQGQIKLC 142 (286)
T ss_pred EEEEeccCccHHHHHHh----------CCCCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCChhhEEEcCCCcEEEC
Confidence 99999999998888765 234589999999999999999999977 99999999999999999999999
Q ss_pred ecccceecCCCCCccccccccCccCccCccccCC-CccCCccchHHHHHHHHHHHhCCCCCccccccCch--hhhhcccc
Q 039533 784 DFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVG-CEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDIN--LHNFGRKA 860 (949)
Q Consensus 784 DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~--~~~~~~~~ 860 (949)
|||.+.......... ....++..|+|||++.+ ..++.++||||||+++|||++|+.||......+.. ........
T Consensus 143 dfg~~~~~~~~~~~~--~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~ 220 (286)
T cd07847 143 DFGFARILTGPGDDY--TDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDL 220 (286)
T ss_pred ccccceecCCCcccc--cCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCC
Confidence 999998765433211 12347889999999876 45789999999999999999999999643321111 00000000
Q ss_pred CCCchhhhcc------cCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 039533 861 LPDDVMDIVD------SSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVH 926 (949)
Q Consensus 861 ~~~~~~~~~d------~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 926 (949)
.+ ...+..+ ....+.+.. ...........+..+.+++.+|++.+|++||++.|++.
T Consensus 221 ~~-~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~ 282 (286)
T cd07847 221 IP-RHQQIFSTNQFFKGLSIPEPET---------REPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLE 282 (286)
T ss_pred Ch-HHhhhcccccccccccCCCccc---------ccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhc
Confidence 00 0000000 000000000 00000011133567889999999999999999999875
No 226
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=100.00 E-value=1.7e-34 Score=309.19 Aligned_cols=254 Identities=24% Similarity=0.389 Sum_probs=191.7
Q ss_pred CeeeeecCceEEEEEEcC---CCEEEEEEEEecCC-CcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCccceeEe
Q 039533 632 NLVGVGSFGSVYKGIIDE---GRTTIAVKVFNLQH-HGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFKASVY 707 (949)
Q Consensus 632 ~~lg~G~~g~Vy~~~~~~---~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~ 707 (949)
+.||+|+||.||+|.+.. ....||+|++.... ....+.+.+|+.+++.++||||+++++++...+ ...++||
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~----~~~~lv~ 76 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSE----GSPLVVL 76 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCC----CCcEEEE
Confidence 468999999999998642 34679999885332 234567889999999999999999999775322 3578999
Q ss_pred eeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEeeccc
Q 039533 708 EFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVGDFGL 787 (949)
Q Consensus 708 e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~DfG~ 787 (949)
||+.+++|.+++... ....++..+..++.|++.|++|||+. +++||||||+||++++++.+||+|||+
T Consensus 77 e~~~~~~L~~~~~~~---------~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlk~~nili~~~~~~kl~dfg~ 144 (262)
T cd05058 77 PYMKHGDLRNFIRSE---------THNPTVKDLIGFGLQVAKGMEYLASK---KFVHRDLAARNCMLDESFTVKVADFGL 144 (262)
T ss_pred ecCCCCCHHHHHHhc---------CCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccCcceEEEcCCCcEEECCccc
Confidence 999999999999621 23467778899999999999999976 999999999999999999999999999
Q ss_pred ceecCCCCCc--cccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhC-CCCCccccccCchhhhhccccCCCc
Q 039533 788 ARILSPDHTQ--TSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIG-KKPIDIMFEGDINLHNFGRKALPDD 864 (949)
Q Consensus 788 a~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg-~~Pf~~~~~~~~~~~~~~~~~~~~~ 864 (949)
++........ .......++..|+|||++.+..++.++|||||||++|||++| .+||...... ......
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~--~~~~~~------- 215 (262)
T cd05058 145 ARDIYDKEYYSVHNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVDSF--DITVYL------- 215 (262)
T ss_pred cccccCCcceeecccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCCHH--HHHHHH-------
Confidence 9765432211 111123467789999999888899999999999999999995 5566422110 010000
Q ss_pred hhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHHhHH
Q 039533 865 VMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHELQSIKN 933 (949)
Q Consensus 865 ~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~~ 933 (949)
........ ....+..+.+++.+||+.+|++||++.||++.|+++..
T Consensus 216 ----~~~~~~~~-------------------~~~~~~~~~~li~~cl~~~p~~Rp~~~~il~~l~~~~~ 261 (262)
T cd05058 216 ----LQGRRLLQ-------------------PEYCPDPLYEVMLSCWHPKPEMRPTFSELVSRIEQIFS 261 (262)
T ss_pred ----hcCCCCCC-------------------CCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHhc
Confidence 00000000 01224568899999999999999999999999998753
No 227
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=4.4e-35 Score=346.96 Aligned_cols=261 Identities=18% Similarity=0.250 Sum_probs=199.9
Q ss_pred HHHhcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCC--CcchHHHHHHHHHHHhcCCCcceeEEeeeecccccC
Q 039533 622 YNATSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQH--HGASRSFIAECKALKSIRHRNLVKVLTACLGADYRG 699 (949)
Q Consensus 622 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 699 (949)
....++|.+.+.||+|+||+||+|.+..++..||+|++.... ......+..|+.++++++||||++++++|....
T Consensus 9 e~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~--- 85 (1021)
T PTZ00266 9 ESRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKA--- 85 (1021)
T ss_pred ccccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecC---
Confidence 345678999999999999999999999899999999987442 223467889999999999999999999875432
Q ss_pred CccceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCC----CCCeEecCCCCCCeeec
Q 039533 700 NDFKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDC----QPVTAHCDLKPSNVLLD 775 (949)
Q Consensus 700 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~----~~~ivHrDlkp~NIll~ 775 (949)
....++||||+++|+|.+++.... .....+++..++.|+.||+.||+|||+.. ..+||||||||+|||++
T Consensus 86 ~~~lyIVMEY~~gGSL~~lL~k~~------~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~ 159 (1021)
T PTZ00266 86 NQKLYILMEFCDAGDLSRNIQKCY------KMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLS 159 (1021)
T ss_pred CCEEEEEEeCCCCCcHHHHHHHHh------hccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEee
Confidence 346899999999999999986321 12346899999999999999999999742 13599999999999996
Q ss_pred C-----------------CCceEEeecccceecCCCCCccccccccCccCccCccccCC--CccCCccchHHHHHHHHHH
Q 039533 776 D-----------------YMTARVGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVG--CEVSTNGDVYSYGILLLEL 836 (949)
Q Consensus 776 ~-----------------~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~sDiwSlGvvl~el 836 (949)
. .+.+||+|||++......... ....||+.|+|||++.+ ..++.++|||||||++|||
T Consensus 160 s~~~~lg~i~~~~~n~ng~~iVKLsDFGlAr~l~~~s~~---~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYEL 236 (1021)
T PTZ00266 160 TGIRHIGKITAQANNLNGRPIAKIGDFGLSKNIGIESMA---HSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYEL 236 (1021)
T ss_pred cCccccccccccccccCCCCceEEccCCccccccccccc---cccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHH
Confidence 4 345899999999876433221 13458999999999864 4588999999999999999
Q ss_pred HhCCCCCccccccCchhhhhccccCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCC
Q 039533 837 VIGKKPIDIMFEGDINLHNFGRKALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQ 916 (949)
Q Consensus 837 ltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~ 916 (949)
+||+.||...... .... ..+...... + ....+..+.+++..||+.+|+
T Consensus 237 LTGk~PF~~~~~~----~qli---------~~lk~~p~l-p------------------i~~~S~eL~dLI~~~L~~dPe 284 (1021)
T PTZ00266 237 CSGKTPFHKANNF----SQLI---------SELKRGPDL-P------------------IKGKSKELNILIKNLLNLSAK 284 (1021)
T ss_pred HHCCCCCCcCCcH----HHHH---------HHHhcCCCC-C------------------cCCCCHHHHHHHHHHhcCChh
Confidence 9999999632111 0000 000000000 0 001245678999999999999
Q ss_pred CCCCHHHHHH
Q 039533 917 DRTNMTNVVH 926 (949)
Q Consensus 917 ~RPs~~ev~~ 926 (949)
+||++.|++.
T Consensus 285 eRPSa~QlL~ 294 (1021)
T PTZ00266 285 ERPSALQCLG 294 (1021)
T ss_pred HCcCHHHHhc
Confidence 9999999984
No 228
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=100.00 E-value=7.2e-35 Score=315.41 Aligned_cols=254 Identities=24% Similarity=0.307 Sum_probs=200.1
Q ss_pred hcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCCcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCccce
Q 039533 625 TSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFKA 704 (949)
Q Consensus 625 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 704 (949)
.++|++.+.||.|+||.||+|.+..++..||+|+++.......+.+.+|++++++++||||+++++++.... ..+
T Consensus 4 ~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-----~~~ 78 (280)
T cd06611 4 NDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYFYEN-----KLW 78 (280)
T ss_pred hhHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCC-----eEE
Confidence 457899999999999999999998889999999998665555678889999999999999999999976544 789
Q ss_pred eEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEee
Q 039533 705 SVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVGD 784 (949)
Q Consensus 705 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~D 784 (949)
+||||+++++|.+++.. ....+++..+..++.|++.|+.|||+. +|+||||||+||+++.++.++|+|
T Consensus 79 lv~e~~~~~~L~~~~~~---------~~~~l~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~nili~~~~~~~l~d 146 (280)
T cd06611 79 ILIEFCDGGALDSIMLE---------LERGLTEPQIRYVCRQMLEALNFLHSH---KVIHRDLKAGNILLTLDGDVKLAD 146 (280)
T ss_pred EEeeccCCCcHHHHHHH---------hcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEECCCCCEEEcc
Confidence 99999999999999862 234589999999999999999999977 899999999999999999999999
Q ss_pred cccceecCCCCCccccccccCccCccCccccC-----CCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhccc
Q 039533 785 FGLARILSPDHTQTSSFSVKGSLGYIAPEYGV-----GCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRK 859 (949)
Q Consensus 785 fG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~ 859 (949)
||.+.......... ....++..|+|||++. +..++.++||||||+++|||++|+.||....... ....
T Consensus 147 ~g~~~~~~~~~~~~--~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~~-~~~~---- 219 (280)
T cd06611 147 FGVSAKNKSTLQKR--DTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPMR-VLLK---- 219 (280)
T ss_pred Cccchhhccccccc--ceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHHH-HHHH----
Confidence 99987654332211 1345899999999874 3457789999999999999999999986431110 0000
Q ss_pred cCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHH
Q 039533 860 ALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHE 927 (949)
Q Consensus 860 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 927 (949)
+... ..+. .......+..+.+++..|++.+|++||++.+|++.
T Consensus 220 --------~~~~-~~~~----------------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 262 (280)
T cd06611 220 --------ILKS-EPPT----------------LDQPSKWSSSFNDFLKSCLVKDPDDRPTAAELLKH 262 (280)
T ss_pred --------HhcC-CCCC----------------cCCcccCCHHHHHHHHHHhccChhhCcCHHHHhcC
Confidence 0000 0000 00001233457889999999999999999999764
No 229
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=100.00 E-value=2.3e-34 Score=307.86 Aligned_cols=240 Identities=20% Similarity=0.343 Sum_probs=185.3
Q ss_pred CeeeeecCceEEEEEEcC------------CCEEEEEEEEecCCCcchHHHHHHHHHHHhcCCCcceeEEeeeecccccC
Q 039533 632 NLVGVGSFGSVYKGIIDE------------GRTTIAVKVFNLQHHGASRSFIAECKALKSIRHRNLVKVLTACLGADYRG 699 (949)
Q Consensus 632 ~~lg~G~~g~Vy~~~~~~------------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 699 (949)
+.||+|+||.||+|+... ....||+|++..........+.+|+.++++++||||+++++++....
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~--- 77 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSHKHIVLLYGVCVRDV--- 77 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCC---
Confidence 468999999999998642 23368999987655555567889999999999999999999976544
Q ss_pred CccceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCc
Q 039533 700 NDFKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMT 779 (949)
Q Consensus 700 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~ 779 (949)
..++||||+++++|..++.. ....+++..+..++.|+++|++|||+. +|+||||||+||+++.++.
T Consensus 78 --~~~lv~e~~~~~~l~~~~~~---------~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~ 143 (262)
T cd05077 78 --ENIMVEEFVEFGPLDLFMHR---------KSDVLTTPWKFKVAKQLASALSYLEDK---DLVHGNVCTKNILLAREGI 143 (262)
T ss_pred --CCEEEEecccCCCHHHHHHh---------cCCCCCHHHHHHHHHHHHHHHHHhhhC---CeECCCCCcccEEEecCCc
Confidence 67999999999999998862 224588999999999999999999977 9999999999999986654
Q ss_pred -------eEEeecccceecCCCCCccccccccCccCccCccccC-CCccCCccchHHHHHHHHHHH-hCCCCCccccccC
Q 039533 780 -------ARVGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGV-GCEVSTNGDVYSYGILLLELV-IGKKPIDIMFEGD 850 (949)
Q Consensus 780 -------~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~sDiwSlGvvl~ell-tg~~Pf~~~~~~~ 850 (949)
++++|||.+....... ...++..|+|||++. +..++.++|||||||++|||+ +|+.||.......
T Consensus 144 ~~~~~~~~~l~d~g~~~~~~~~~------~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~ 217 (262)
T cd05077 144 DGECGPFIKLSDPGIPITVLSRQ------ECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAE 217 (262)
T ss_pred cCCCCceeEeCCCCCCccccCcc------cccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhH
Confidence 8999999987543221 234788999999887 456889999999999999998 5888875321100
Q ss_pred chhhhhccccCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHH
Q 039533 851 INLHNFGRKALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHEL 928 (949)
Q Consensus 851 ~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L 928 (949)
. ........... ......+.+++.+||+.||++||++.|+++.+
T Consensus 218 --~------------~~~~~~~~~~~--------------------~~~~~~~~~li~~cl~~dp~~Rp~~~~il~~~ 261 (262)
T cd05077 218 --K------------ERFYEGQCMLV--------------------TPSCKELADLMTHCMNYDPNQRPFFRAIMRDI 261 (262)
T ss_pred --H------------HHHHhcCccCC--------------------CCChHHHHHHHHHHcCCChhhCcCHHHHHHhc
Confidence 0 00000000000 01134578899999999999999999999875
No 230
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=100.00 E-value=2.2e-34 Score=308.26 Aligned_cols=255 Identities=27% Similarity=0.456 Sum_probs=201.0
Q ss_pred hcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCCcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCccce
Q 039533 625 TSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFKA 704 (949)
Q Consensus 625 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 704 (949)
-++|++.++||+|+||.||+|... +++.||||.+..... ..+++.+|+.++++++|+||+++++++.... ..+
T Consensus 5 ~~~~~i~~~ig~g~~~~v~~~~~~-~~~~~~vK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-----~~~ 77 (261)
T cd05034 5 RESLKLERKLGAGQFGEVWMGTWN-GTTKVAVKTLKPGTM-SPEAFLQEAQIMKKLRHDKLVQLYAVCSEEE-----PIY 77 (261)
T ss_pred hhheeeeeeeccCcceEEEEEEEc-CCceEEEEEecCCcc-CHHHHHHHHHHHhhCCCCCEeeeeeeeecCC-----ceE
Confidence 467899999999999999999986 567899999874432 3467899999999999999999999865433 689
Q ss_pred eEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEee
Q 039533 705 SVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVGD 784 (949)
Q Consensus 705 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~D 784 (949)
+||||+++++|.+++... ....+++.++..++.|++.|++|||+. +++||||||+||++++++.+||+|
T Consensus 78 ~v~e~~~~~~L~~~i~~~--------~~~~~~~~~~~~~~~~i~~al~~lh~~---~i~h~di~p~nili~~~~~~~l~d 146 (261)
T cd05034 78 IVTEYMSKGSLLDFLKSG--------EGKKLRLPQLVDMAAQIAEGMAYLESR---NYIHRDLAARNILVGENLVCKIAD 146 (261)
T ss_pred EEEeccCCCCHHHHHhcc--------ccCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcchheEEEcCCCCEEECc
Confidence 999999999999999631 224589999999999999999999977 899999999999999999999999
Q ss_pred cccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHh-CCCCCccccccCchhhhhccccCCC
Q 039533 785 FGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVI-GKKPIDIMFEGDINLHNFGRKALPD 863 (949)
Q Consensus 785 fG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~ 863 (949)
||.++......... .....++..|+|||...+..++.++||||+|+++||+++ |+.||....... ...
T Consensus 147 ~g~~~~~~~~~~~~-~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~-~~~--------- 215 (261)
T cd05034 147 FGLARLIEDDEYTA-REGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNRE-VLE--------- 215 (261)
T ss_pred cccceeccchhhhh-hhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHH-HHH---------
Confidence 99998765432211 112235678999999998889999999999999999999 999985321110 000
Q ss_pred chhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHH
Q 039533 864 DVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHELQS 930 (949)
Q Consensus 864 ~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~ 930 (949)
.+....-.+.+ .+.+..+.+++.+|++.+|++||+++|+.+.|+.
T Consensus 216 ---~~~~~~~~~~~-------------------~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~l~~ 260 (261)
T cd05034 216 ---QVERGYRMPRP-------------------PNCPEELYDLMLQCWDKDPEERPTFEYLQSFLED 260 (261)
T ss_pred ---HHHcCCCCCCC-------------------CCCCHHHHHHHHHHcccCcccCCCHHHHHHHHhc
Confidence 00000000000 1224568899999999999999999999999875
No 231
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=100.00 E-value=1.1e-34 Score=322.36 Aligned_cols=289 Identities=19% Similarity=0.227 Sum_probs=206.6
Q ss_pred hcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCC-CcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCccc
Q 039533 625 TSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQH-HGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFK 703 (949)
Q Consensus 625 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 703 (949)
+++|++.+.||+|+||.||+|.+..+++.||+|+++... ......+.+|+.++++++||||+++++++....+......
T Consensus 4 ~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 83 (336)
T cd07849 4 GPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFNDV 83 (336)
T ss_pred ccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccceE
Confidence 578999999999999999999998889999999986432 2334668889999999999999999998876665555678
Q ss_pred eeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEe
Q 039533 704 ASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVG 783 (949)
Q Consensus 704 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~ 783 (949)
++|+||++ +++.+++. ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+
T Consensus 84 ~lv~e~~~-~~l~~~~~-----------~~~l~~~~~~~i~~ql~~aL~~LH~~---~ivH~dlkp~Nill~~~~~~kl~ 148 (336)
T cd07849 84 YIVQELME-TDLYKLIK-----------TQHLSNDHIQYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTNCDLKIC 148 (336)
T ss_pred EEEehhcc-cCHHHHHh-----------cCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEECCCCCEEEC
Confidence 99999996 48887775 23588999999999999999999977 89999999999999999999999
Q ss_pred ecccceecCCCCCcc-ccccccCccCccCccccCC-CccCCccchHHHHHHHHHHHhCCCCCccccccCc--hhhhhccc
Q 039533 784 DFGLARILSPDHTQT-SSFSVKGSLGYIAPEYGVG-CEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDI--NLHNFGRK 859 (949)
Q Consensus 784 DfG~a~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~-~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~--~~~~~~~~ 859 (949)
|||++.......... ......|+..|+|||++.+ ..++.++||||+||++|||++|+.||........ ........
T Consensus 149 dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~~~~~~~~~~~~ 228 (336)
T cd07849 149 DFGLARIADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQLNLILGVLGT 228 (336)
T ss_pred cccceeeccccccccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCC
Confidence 999998764432211 1123458899999998654 4688999999999999999999999953211100 00000000
Q ss_pred cCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHH--HHHhH
Q 039533 860 ALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHE--LQSIK 932 (949)
Q Consensus 860 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~--L~~i~ 932 (949)
..++....+.+.. ..+......................++.+++.+|++.+|++|||+.|+++. ++...
T Consensus 229 ~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~hp~~~~~~ 299 (336)
T cd07849 229 PSQEDLNCIISLR----ARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAHPYLEQYH 299 (336)
T ss_pred CCHHHHHHhhchh----hhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcCccccccC
Confidence 0111111111100 000000000000000000111235678999999999999999999999886 55443
No 232
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=100.00 E-value=1.1e-34 Score=317.22 Aligned_cols=285 Identities=19% Similarity=0.253 Sum_probs=201.5
Q ss_pred hcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCC-CcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCccc
Q 039533 625 TSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQH-HGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFK 703 (949)
Q Consensus 625 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 703 (949)
.++|.+.+.||+|+||.||+|.+..+++.||+|.++... ......+.+|+.++++++||||+++++++.... ..
T Consensus 5 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~-----~~ 79 (301)
T cd07873 5 LETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEK-----SL 79 (301)
T ss_pred ccceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEecCC-----eE
Confidence 357899999999999999999998889999999987443 233456788999999999999999999976444 78
Q ss_pred eeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEe
Q 039533 704 ASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVG 783 (949)
Q Consensus 704 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~ 783 (949)
++||||++ ++|.+++.. ....+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+
T Consensus 80 ~lv~e~~~-~~l~~~l~~---------~~~~~~~~~~~~~~~qi~~aL~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~ 146 (301)
T cd07873 80 TLVFEYLD-KDLKQYLDD---------CGNSINMHNVKLFLFQLLRGLNYCHRR---KVLHRDLKPQNLLINERGELKLA 146 (301)
T ss_pred EEEEeccc-cCHHHHHHh---------cCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHHHEEECCCCcEEEC
Confidence 99999997 589888862 234578899999999999999999977 99999999999999999999999
Q ss_pred ecccceecCCCCCccccccccCccCccCccccCCC-ccCCccchHHHHHHHHHHHhCCCCCccccccCch--hhhhcccc
Q 039533 784 DFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGC-EVSTNGDVYSYGILLLELVIGKKPIDIMFEGDIN--LHNFGRKA 860 (949)
Q Consensus 784 DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~--~~~~~~~~ 860 (949)
|||++.......... ....++..|+|||++.+. .++.++|||||||++|||++|++||......+.. ........
T Consensus 147 dfg~~~~~~~~~~~~--~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~~~~~~~~~~~~ 224 (301)
T cd07873 147 DFGLARAKSIPTKTY--SNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRILGTP 224 (301)
T ss_pred cCcchhccCCCCCcc--cccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCC
Confidence 999997644322211 123478899999987654 4788999999999999999999999643221100 00000000
Q ss_pred CCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH--HHHHhHHh
Q 039533 861 LPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVH--ELQSIKNI 934 (949)
Q Consensus 861 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~--~L~~i~~~ 934 (949)
..+.+..+.+........ ................+..+.+++.+|++.||++|||++|+++ .++.+.+.
T Consensus 225 ~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~h~~f~~~~~~ 295 (301)
T cd07873 225 TEETWPGILSNEEFKSYN-----YPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMKHPYFHCLGER 295 (301)
T ss_pred Chhhchhhhccccccccc-----cCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhcCcccccccch
Confidence 000011111000000000 0000000000001123456789999999999999999999987 44444433
No 233
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=100.00 E-value=2.5e-34 Score=310.18 Aligned_cols=249 Identities=23% Similarity=0.335 Sum_probs=200.7
Q ss_pred cCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCC-CcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCccce
Q 039533 626 SGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQH-HGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFKA 704 (949)
Q Consensus 626 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 704 (949)
++|++.+.||.|++|.||+|.+..+++.||+|++.... ......+.+|++++++++|+||+++++++.+.. ..+
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-----~~~ 75 (274)
T cd06609 1 ELFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGS-----KLW 75 (274)
T ss_pred ChhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECC-----eEE
Confidence 46888999999999999999999889999999987543 333467889999999999999999999876543 789
Q ss_pred eEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEee
Q 039533 705 SVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVGD 784 (949)
Q Consensus 705 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~D 784 (949)
+|+||+++++|.+++.. ..+++..+..++.|++.|+.|||+. +++||||+|+||++++++.++|+|
T Consensus 76 ~v~e~~~~~~L~~~~~~-----------~~~~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~d 141 (274)
T cd06609 76 IIMEYCGGGSCLDLLKP-----------GKLDETYIAFILREVLLGLEYLHEE---GKIHRDIKAANILLSEEGDVKLAD 141 (274)
T ss_pred EEEEeeCCCcHHHHHhh-----------cCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEcc
Confidence 99999999999999862 2688999999999999999999977 899999999999999999999999
Q ss_pred cccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhccccCCCc
Q 039533 785 FGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKALPDD 864 (949)
Q Consensus 785 fG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~ 864 (949)
||.++......... ....++..|+|||+..+..++.++|||||||++|||+||+.||....... ..
T Consensus 142 ~g~~~~~~~~~~~~--~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~~--~~---------- 207 (274)
T cd06609 142 FGVSGQLTSTMSKR--NTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPMR--VL---------- 207 (274)
T ss_pred cccceeeccccccc--ccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCchHH--HH----------
Confidence 99998876442211 13458889999999998889999999999999999999999996432110 00
Q ss_pred hhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 039533 865 VMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVH 926 (949)
Q Consensus 865 ~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 926 (949)
..+.....+... . ...+..+.+++.+|+..+|++|||++++++
T Consensus 208 --~~~~~~~~~~~~----------------~-~~~~~~~~~~l~~~l~~~p~~Rpt~~~il~ 250 (274)
T cd06609 208 --FLIPKNNPPSLE----------------G-NKFSKPFKDFVSLCLNKDPKERPSAKELLK 250 (274)
T ss_pred --HHhhhcCCCCCc----------------c-cccCHHHHHHHHHHhhCChhhCcCHHHHhh
Confidence 000000000000 0 013446788999999999999999999976
No 234
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=100.00 E-value=3.2e-34 Score=316.29 Aligned_cols=206 Identities=21% Similarity=0.319 Sum_probs=163.2
Q ss_pred CCeeeeecCceEEEEEEc--CCCEEEEEEEEecCCCcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCccceeEee
Q 039533 631 ANLVGVGSFGSVYKGIID--EGRTTIAVKVFNLQHHGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFKASVYE 708 (949)
Q Consensus 631 ~~~lg~G~~g~Vy~~~~~--~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e 708 (949)
.++||+|+||.||+|++. .+++.||+|++.... ......+|++++++++||||+++++++.... ....++|||
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~---~~~~~lv~e 80 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTG--ISMSACREIALLRELKHPNVISLQKVFLSHA---DRKVWLLFD 80 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCCC--CcHHHHHHHHHHHhcCCCCCcceeeeEecCC---CcEEEEEEe
Confidence 468999999999999975 356889999986432 2356789999999999999999999875332 346789999
Q ss_pred eccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeee----cCCCceEEee
Q 039533 709 FMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLL----DDYMTARVGD 784 (949)
Q Consensus 709 ~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll----~~~~~~kl~D 784 (949)
|+. ++|.+++....... .......+++..+..++.|++.||+|||++ +|+||||||+||++ +.++.+||+|
T Consensus 81 ~~~-~~l~~~~~~~~~~~-~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivHrDlkp~Nil~~~~~~~~~~~kl~D 155 (317)
T cd07868 81 YAE-HDLWHIIKFHRASK-ANKKPVQLPRGMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVKIAD 155 (317)
T ss_pred ccC-CCHHHHHHhccccc-ccCCcccCCHHHHHHHHHHHHHHHHHHHhC---CEEcCCCCHHHEEEecCCCCcCcEEEee
Confidence 986 58888875322111 111234589999999999999999999977 89999999999999 4667999999
Q ss_pred cccceecCCCCCc-cccccccCccCccCccccCCC-ccCCccchHHHHHHHHHHHhCCCCCccc
Q 039533 785 FGLARILSPDHTQ-TSSFSVKGSLGYIAPEYGVGC-EVSTNGDVYSYGILLLELVIGKKPIDIM 846 (949)
Q Consensus 785 fG~a~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~-~~~~~sDiwSlGvvl~elltg~~Pf~~~ 846 (949)
||+|+........ .......||+.|+|||++.+. .++.++||||+||++|||++|++||...
T Consensus 156 fG~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~ 219 (317)
T cd07868 156 MGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCR 219 (317)
T ss_pred cCceeccCCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccCC
Confidence 9999876543221 112235689999999998774 5889999999999999999999999643
No 235
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=100.00 E-value=3.4e-34 Score=305.75 Aligned_cols=251 Identities=21% Similarity=0.312 Sum_probs=201.9
Q ss_pred CCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCC--CcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCccce
Q 039533 627 GFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQH--HGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFKA 704 (949)
Q Consensus 627 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 704 (949)
+|++.+.||.|+||.||.++...+++.+++|.+.... ....+++.+|++++++++|+||+++++++.+.+ ..+
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~-----~~~ 75 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDDN-----TLL 75 (256)
T ss_pred CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCC-----eEE
Confidence 5888999999999999999999889999999987543 334467889999999999999999999976544 789
Q ss_pred eEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEee
Q 039533 705 SVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVGD 784 (949)
Q Consensus 705 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~D 784 (949)
+||||+++++|.+++... ....+++.++..++.|++.|++|||+. +++||||+|+||++++++.+||+|
T Consensus 76 ~~~e~~~~~~L~~~~~~~--------~~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~ni~~~~~~~~kl~d 144 (256)
T cd08221 76 IEMEYANGGTLYDKIVRQ--------KGQLFEEEMVLWYLFQIVSAVSYIHKA---GILHRDIKTLNIFLTKAGLIKLGD 144 (256)
T ss_pred EEEEecCCCcHHHHHHhc--------cccCCCHHHHHHHHHHHHHHHHHHHhC---CccccCCChHhEEEeCCCCEEECc
Confidence 999999999999999621 134588999999999999999999977 899999999999999999999999
Q ss_pred cccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhccccCCCc
Q 039533 785 FGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKALPDD 864 (949)
Q Consensus 785 fG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~ 864 (949)
||.+......... .....|+..|+|||+..+..++.++||||||+++|||++|+.||+...... .
T Consensus 145 ~~~~~~~~~~~~~--~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~-----~-------- 209 (256)
T cd08221 145 FGISKILGSEYSM--AETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNPLN-----L-------- 209 (256)
T ss_pred CcceEEccccccc--ccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCHHH-----H--------
Confidence 9999876544321 123458999999999988888999999999999999999999986321110 0
Q ss_pred hhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHH
Q 039533 865 VMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHE 927 (949)
Q Consensus 865 ~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 927 (949)
...+........ ....+..+.+++.+|++.+|++||++.|+++.
T Consensus 210 ~~~~~~~~~~~~-------------------~~~~~~~~~~~i~~~l~~~p~~R~s~~~ll~~ 253 (256)
T cd08221 210 VVKIVQGNYTPV-------------------VSVYSSELISLVHSLLQQDPEKRPTADEVLDQ 253 (256)
T ss_pred HHHHHcCCCCCC-------------------ccccCHHHHHHHHHHcccCcccCCCHHHHhhC
Confidence 001111000000 01334567889999999999999999999875
No 236
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=100.00 E-value=2.8e-34 Score=306.68 Aligned_cols=252 Identities=23% Similarity=0.303 Sum_probs=199.1
Q ss_pred CCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCC--cchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCccce
Q 039533 627 GFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHH--GASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFKA 704 (949)
Q Consensus 627 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 704 (949)
+|++.+.||+|++|.||+|.+..+++.||+|++..... ...+.+.+|++++++++|+|++++++.+... ....+
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~----~~~~~ 76 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGE----DGLLY 76 (257)
T ss_pred CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCC----CCEEE
Confidence 58899999999999999999988889999999864332 3345788999999999999999998875322 23578
Q ss_pred eEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEee
Q 039533 705 SVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVGD 784 (949)
Q Consensus 705 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~D 784 (949)
+||||+++++|.+++... ....+++.++..++.|++.|++|||+. +++||||||+||+++.++.++|+|
T Consensus 77 lv~e~~~~~~l~~~l~~~--------~~~~l~~~~~~~~~~~l~~~l~~lH~~---~i~H~di~p~nil~~~~~~~~l~d 145 (257)
T cd08223 77 IVMGFCEGGDLYHKLKEQ--------KGKLLPENQVVEWFVQIAMALQYLHEK---HILHRDLKTQNVFLTRTNIIKVGD 145 (257)
T ss_pred EEecccCCCcHHHHHHHh--------cCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCchhEEEecCCcEEEec
Confidence 999999999999998621 234588999999999999999999977 899999999999999999999999
Q ss_pred cccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhccccCCCc
Q 039533 785 FGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKALPDD 864 (949)
Q Consensus 785 fG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~ 864 (949)
||.+.......... ....+++.|+|||+..+..++.++||||||+++|||++|+.||+...... ..
T Consensus 146 f~~~~~~~~~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~-----~~------- 211 (257)
T cd08223 146 LGIARVLENQCDMA--STLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDMNS-----LV------- 211 (257)
T ss_pred ccceEEecccCCcc--ccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHH-----HH-------
Confidence 99998764432211 13458899999999999889999999999999999999999986321110 00
Q ss_pred hhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHH
Q 039533 865 VMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHE 927 (949)
Q Consensus 865 ~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 927 (949)
..+....... . ....+..+.+++.+|++.+|++||++.|+++.
T Consensus 212 -~~~~~~~~~~-~------------------~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~ 254 (257)
T cd08223 212 -YRIIEGKLPP-M------------------PKDYSPELGELIATMLSKRPEKRPSVKSILRQ 254 (257)
T ss_pred -HHHHhcCCCC-C------------------ccccCHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 0000000000 0 01234568899999999999999999999763
No 237
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=100.00 E-value=1.9e-34 Score=314.00 Aligned_cols=203 Identities=27% Similarity=0.425 Sum_probs=168.5
Q ss_pred HhcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCC-cchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCcc
Q 039533 624 ATSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHH-GASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDF 702 (949)
Q Consensus 624 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 702 (949)
++.+|.+.+.||+|+||.||+|....+++.||+|+++.... .....+.+|+.++++++|+||+++++++...+ .
T Consensus 3 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~-----~ 77 (291)
T cd07870 3 AATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIHTKE-----T 77 (291)
T ss_pred ccceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCC-----e
Confidence 46789999999999999999999988899999999875432 23356789999999999999999999975443 7
Q ss_pred ceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEE
Q 039533 703 KASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARV 782 (949)
Q Consensus 703 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl 782 (949)
.++||||+. +++.+++.. ....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||
T Consensus 78 ~~lv~e~~~-~~l~~~~~~---------~~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dlkp~Nil~~~~~~~~l 144 (291)
T cd07870 78 LTFVFEYMH-TDLAQYMIQ---------HPGGLHPYNVRLFMFQLLRGLAYIHGQ---HILHRDLKPQNLLISYLGELKL 144 (291)
T ss_pred EEEEEeccc-CCHHHHHHh---------CCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHHEEEcCCCcEEE
Confidence 899999996 677777642 123467888899999999999999977 8999999999999999999999
Q ss_pred eecccceecCCCCCccccccccCccCccCccccCCC-ccCCccchHHHHHHHHHHHhCCCCCccc
Q 039533 783 GDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGC-EVSTNGDVYSYGILLLELVIGKKPIDIM 846 (949)
Q Consensus 783 ~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDiwSlGvvl~elltg~~Pf~~~ 846 (949)
+|||.++......... ....++..|+|||++.+. .++.++|||||||++|||++|+.||+..
T Consensus 145 ~Dfg~~~~~~~~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~ 207 (291)
T cd07870 145 ADFGLARAKSIPSQTY--SSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGV 207 (291)
T ss_pred eccccccccCCCCCCC--CCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCc
Confidence 9999987643322111 133478999999998764 5788999999999999999999999744
No 238
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=9.8e-35 Score=314.97 Aligned_cols=263 Identities=23% Similarity=0.307 Sum_probs=203.6
Q ss_pred hcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCC-CcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCccc
Q 039533 625 TSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQH-HGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFK 703 (949)
Q Consensus 625 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 703 (949)
.++|++.+.||+|+||+||+|.+..+++.||+|++.... ....+.+.+|+++++.++||||+++++++.... ..
T Consensus 4 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-----~~ 78 (284)
T cd06620 4 NEDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFLNEN-----NI 78 (284)
T ss_pred HHHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEecCC-----EE
Confidence 356888899999999999999999889999999987543 233567899999999999999999999986554 78
Q ss_pred eeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEe
Q 039533 704 ASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVG 783 (949)
Q Consensus 704 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~ 783 (949)
++||||+++++|.+++.. .+.+++..+..++.|++.|+.|||+.+ +++||||||+||++++++.++|+
T Consensus 79 ~lv~e~~~~~~L~~~~~~----------~~~~~~~~~~~~~~~i~~~l~~LH~~~--~i~H~dl~p~nil~~~~~~~~l~ 146 (284)
T cd06620 79 CMCMEFMDCGSLDRIYKK----------GGPIPVEILGKIAVAVVEGLTYLYNVH--RIMHRDIKPSNILVNSRGQIKLC 146 (284)
T ss_pred EEEEecCCCCCHHHHHHh----------ccCCCHHHHHHHHHHHHHHHHHHHHhc--CeeccCCCHHHEEECCCCcEEEc
Confidence 999999999999998862 245889999999999999999999632 79999999999999999999999
Q ss_pred ecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhccccCCC
Q 039533 784 DFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKALPD 863 (949)
Q Consensus 784 DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~ 863 (949)
|||++........ ....|+..|+|||++.+..++.++|||||||++||+++|+.||+........ ...+.
T Consensus 147 d~gl~~~~~~~~~----~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~------~~~~~ 216 (284)
T cd06620 147 DFGVSGELINSIA----DTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDG------QDDPM 216 (284)
T ss_pred cCCcccchhhhcc----CccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhh------hhhhh
Confidence 9999875432221 1345899999999998888999999999999999999999999744321100 00000
Q ss_pred chhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHH
Q 039533 864 DVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHEL 928 (949)
Q Consensus 864 ~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L 928 (949)
.+.+.+........ ..++ ..+.+..+.+++.+|++.||++|||+.||++..
T Consensus 217 ~~~~~~~~~~~~~~-------------~~~~-~~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~~ 267 (284)
T cd06620 217 GILDLLQQIVQEPP-------------PRLP-SSDFPEDLRDFVDACLLKDPTERPTPQQLCAMP 267 (284)
T ss_pred HHHHHHHHHhhccC-------------CCCC-chhcCHHHHHHHHHHhcCCcccCcCHHHHhcCc
Confidence 11111111110000 0000 012456788999999999999999999999864
No 239
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=100.00 E-value=1.3e-34 Score=311.48 Aligned_cols=256 Identities=26% Similarity=0.420 Sum_probs=195.8
Q ss_pred CeeeeecCceEEEEEEcCCC------EEEEEEEEecCC-CcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCccce
Q 039533 632 NLVGVGSFGSVYKGIIDEGR------TTIAVKVFNLQH-HGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFKA 704 (949)
Q Consensus 632 ~~lg~G~~g~Vy~~~~~~~~------~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 704 (949)
+.||+|+||.||+|+..... +.||+|.+.... ......+.+|+.++++++||||+++++++...+ ..+
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-----~~~ 75 (269)
T cd05044 1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNE-----PQY 75 (269)
T ss_pred CccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCC-----CeE
Confidence 46899999999999986433 689999886433 234567889999999999999999999976544 689
Q ss_pred eEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCC-----c
Q 039533 705 SVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYM-----T 779 (949)
Q Consensus 705 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~-----~ 779 (949)
+||||+++++|.+++....... .....+++.+++.++.|++.|++|||+. +++||||||+||+++.++ .
T Consensus 76 ~v~e~~~~~~L~~~l~~~~~~~---~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~~~~ 149 (269)
T cd05044 76 IIMELMEGGDLLSYLRDARVER---FGPPLLTLKELLDICLDVAKGCVYLEQM---HFIHRDLAARNCLVSEKGYDADRV 149 (269)
T ss_pred EEEeccCCCcHHHHHHHhhhcc---cCCccccHHHHHHHHHHHHHHHHHHHhC---CcccCCCChheEEEecCCCCCCcc
Confidence 9999999999999996322111 1234578999999999999999999976 899999999999999877 8
Q ss_pred eEEeecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHh-CCCCCccccccCchhhhhcc
Q 039533 780 ARVGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVI-GKKPIDIMFEGDINLHNFGR 858 (949)
Q Consensus 780 ~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~ellt-g~~Pf~~~~~~~~~~~~~~~ 858 (949)
++++|||+++...............++..|+|||++.+..++.++|||||||++|||++ |+.||...... ....
T Consensus 150 ~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~~--~~~~--- 224 (269)
T cd05044 150 VKIGDFGLARDIYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQ--EVLQ--- 224 (269)
T ss_pred eEECCcccccccccccccccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCHH--HHHH---
Confidence 99999999976543322221122345788999999998899999999999999999998 99998532111 0100
Q ss_pred ccCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHH
Q 039533 859 KALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHELQS 930 (949)
Q Consensus 859 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~ 930 (949)
.++... ++......+..+.+++.+|+..+|++||++++|.+.|++
T Consensus 225 ---------~~~~~~------------------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 269 (269)
T cd05044 225 ---------HVTAGG------------------RLQKPENCPDKIYQLMTNCWAQDPSERPTFDRIQEILQN 269 (269)
T ss_pred ---------HHhcCC------------------ccCCcccchHHHHHHHHHHcCCCcccCCCHHHHHHHHhC
Confidence 000000 000011345678899999999999999999999998863
No 240
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7e-35 Score=305.57 Aligned_cols=248 Identities=22% Similarity=0.310 Sum_probs=203.5
Q ss_pred cCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCCc--chHHHHHHHHHHHhcCCCcceeEEeeeecccccCCccc
Q 039533 626 SGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHG--ASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFK 703 (949)
Q Consensus 626 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 703 (949)
.-|...+.||+|.|+.|-+|++--+|++||||++.+.... ....+.+|++.|+.++|||||++|++.. .....
T Consensus 18 GLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViD-----TQTKl 92 (864)
T KOG4717|consen 18 GLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVID-----TQTKL 92 (864)
T ss_pred eeehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhc-----ccceE
Confidence 4577889999999999999999999999999999765433 3457889999999999999999999843 34479
Q ss_pred eeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeee-cCCCceEE
Q 039533 704 ASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLL-DDYMTARV 782 (949)
Q Consensus 704 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll-~~~~~~kl 782 (949)
|+|+|.-++|+|++|+.. ....+.+.-+.+++.||+.|+.|+|.- .+|||||||+||.+ ..-|-+||
T Consensus 93 yLiLELGD~GDl~DyImK---------He~Gl~E~La~kYF~QI~~AI~YCHqL---HVVHRDLKPENVVFFEKlGlVKL 160 (864)
T KOG4717|consen 93 YLILELGDGGDLFDYIMK---------HEEGLNEDLAKKYFAQIVHAISYCHQL---HVVHRDLKPENVVFFEKLGLVKL 160 (864)
T ss_pred EEEEEecCCchHHHHHHh---------hhccccHHHHHHHHHHHHHHHHHHhhh---hhhcccCCcceeEEeeecCceEe
Confidence 999999999999999973 345588999999999999999999955 79999999999977 46689999
Q ss_pred eecccceecCCCCCccccccccCccCccCccccCCCccC-CccchHHHHHHHHHHHhCCCCCccccccCchhhhhccccC
Q 039533 783 GDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVS-TNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKAL 861 (949)
Q Consensus 783 ~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~ 861 (949)
+|||++-.+.++.... ...|+..|.|||++.|..|+ +++||||+|||+|.+++|++||+...+.+
T Consensus 161 TDFGFSNkf~PG~kL~---TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSE----------- 226 (864)
T KOG4717|consen 161 TDFGFSNKFQPGKKLT---TSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSE----------- 226 (864)
T ss_pred eeccccccCCCcchhh---cccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccchh-----------
Confidence 9999998887776543 34599999999999998886 78999999999999999999997543221
Q ss_pred CCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 039533 862 PDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVH 926 (949)
Q Consensus 862 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 926 (949)
-+..++|-... .+.-...+..+++..|+..||++|.+.+||+.
T Consensus 227 --TLTmImDCKYt--------------------vPshvS~eCrdLI~sMLvRdPkkRAslEeI~s 269 (864)
T KOG4717|consen 227 --TLTMIMDCKYT--------------------VPSHVSKECRDLIQSMLVRDPKKRASLEEIVS 269 (864)
T ss_pred --hhhhhhccccc--------------------CchhhhHHHHHHHHHHHhcCchhhccHHHHhc
Confidence 11222221111 11234566789999999999999999999874
No 241
>PHA03207 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1.2e-34 Score=328.18 Aligned_cols=197 Identities=24% Similarity=0.284 Sum_probs=167.6
Q ss_pred cCCCCCCeeeeecCceEEEEEEcC--CCEEEEEEEEecCCCcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCccc
Q 039533 626 SGFSSANLVGVGSFGSVYKGIIDE--GRTTIAVKVFNLQHHGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFK 703 (949)
Q Consensus 626 ~~y~~~~~lg~G~~g~Vy~~~~~~--~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 703 (949)
.+|.+.+.||+|+||.||+|.... .++.||+|.+... +...+|++++++++||||+++++++.... ..
T Consensus 92 ~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~-----~~~~~E~~il~~l~h~~iv~~~~~~~~~~-----~~ 161 (392)
T PHA03207 92 MQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG-----KTPGREIDILKTISHRAIINLIHAYRWKS-----TV 161 (392)
T ss_pred CceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc-----ccHHHHHHHHHhcCCCCccceeeeEeeCC-----EE
Confidence 579999999999999999998643 4578999987532 34568999999999999999998865433 78
Q ss_pred eeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEe
Q 039533 704 ASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVG 783 (949)
Q Consensus 704 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~ 783 (949)
++|||++. ++|.+++. ....+++.+++.|+.|++.||+|||++ +|+||||||+||+++.++.+||+
T Consensus 162 ~lv~e~~~-~~l~~~l~----------~~~~l~~~~~~~i~~ql~~aL~~LH~~---givHrDlkp~Nill~~~~~~~l~ 227 (392)
T PHA03207 162 CMVMPKYK-CDLFTYVD----------RSGPLPLEQAITIQRRLLEALAYLHGR---GIIHRDVKTENIFLDEPENAVLG 227 (392)
T ss_pred EEEehhcC-CCHHHHHH----------hcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEcCCCCEEEc
Confidence 99999995 68888884 234689999999999999999999977 99999999999999999999999
Q ss_pred ecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccc
Q 039533 784 DFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIM 846 (949)
Q Consensus 784 DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~ 846 (949)
|||+++...............||..|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 228 DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~ 290 (392)
T PHA03207 228 DFGAACKLDAHPDTPQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGK 290 (392)
T ss_pred cCccccccCcccccccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCC
Confidence 999998765543333333456999999999999989999999999999999999999999543
No 242
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=100.00 E-value=5.9e-35 Score=320.75 Aligned_cols=198 Identities=30% Similarity=0.345 Sum_probs=169.9
Q ss_pred CCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCCcchHHHHHHHHHHHhcC-C-----CcceeEEeeeecccccCC
Q 039533 627 GFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHGASRSFIAECKALKSIR-H-----RNLVKVLTACLGADYRGN 700 (949)
Q Consensus 627 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h-----~niv~~~~~~~~~~~~~~ 700 (949)
+|.+.++||+|.||.|-+|.+..+++.||||+++... .-..+...|+.+|+.++ | -|+|+++++|....
T Consensus 187 rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k-~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~---- 261 (586)
T KOG0667|consen 187 RYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKK-RFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRN---- 261 (586)
T ss_pred EEEEEEEecccccceeEEEEecCCCcEEEEEeeccCh-HHHHHHHHHHHHHHHHhccCCCCCeeEEEeeecccccc----
Confidence 7899999999999999999999999999999997543 23466778999999996 3 38999999976555
Q ss_pred ccceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCC--C
Q 039533 701 DFKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDY--M 778 (949)
Q Consensus 701 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~--~ 778 (949)
+.|+|+|.++ .+|+++++.. .-..++...++.++.||+.||.+||.. +|||+||||+|||+.+. .
T Consensus 262 -HlciVfELL~-~NLYellK~n--------~f~Glsl~~ir~~~~Qil~~L~~L~~l---~IIHcDLKPENILL~~~~r~ 328 (586)
T KOG0667|consen 262 -HLCIVFELLS-TNLYELLKNN--------KFRGLSLPLVRKFAQQILTALLFLHEL---GIIHCDLKPENILLKDPKRS 328 (586)
T ss_pred -ceeeeehhhh-hhHHHHHHhc--------CCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCChhheeeccCCcC
Confidence 9999999996 5999999843 234589999999999999999999976 99999999999999633 4
Q ss_pred ceEEeecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCcccc
Q 039533 779 TARVGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMF 847 (949)
Q Consensus 779 ~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~ 847 (949)
.+||+|||.|........ ...-+..|+|||++.|.+|+.+.||||||||++||++|.+.|....
T Consensus 329 ~vKVIDFGSSc~~~q~vy-----tYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG~n 392 (586)
T KOG0667|consen 329 RIKVIDFGSSCFESQRVY-----TYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPGDN 392 (586)
T ss_pred ceeEEecccccccCCcce-----eeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccCCCC
Confidence 799999999987654432 2346789999999999999999999999999999999988886443
No 243
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=100.00 E-value=4.3e-34 Score=308.76 Aligned_cols=249 Identities=23% Similarity=0.340 Sum_probs=200.5
Q ss_pred cCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCC-CcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCccce
Q 039533 626 SGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQH-HGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFKA 704 (949)
Q Consensus 626 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 704 (949)
..|+..+.||.|+||.||+|.+..++..||+|++.... ......+.+|+.+++++.||||+++++++.... ..+
T Consensus 4 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-----~~~ 78 (277)
T cd06640 4 ELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGT-----KLW 78 (277)
T ss_pred HhhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECC-----EEE
Confidence 35778899999999999999998889999999987543 234567889999999999999999999976544 789
Q ss_pred eEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEee
Q 039533 705 SVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVGD 784 (949)
Q Consensus 705 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~D 784 (949)
+||||+++++|.+++.. ..+++.++..++.|++.|++|||+. +++|+||+|+||+++.++.++|+|
T Consensus 79 lv~e~~~~~~L~~~i~~-----------~~l~~~~~~~~~~~l~~~l~~lh~~---~ivH~dl~p~Nil~~~~~~~~l~d 144 (277)
T cd06640 79 IIMEYLGGGSALDLLRA-----------GPFDEFQIATMLKEILKGLDYLHSE---KKIHRDIKAANVLLSEQGDVKLAD 144 (277)
T ss_pred EEEecCCCCcHHHHHhc-----------CCCCHHHHHHHHHHHHHHHHHHHhC---CccCcCCChhhEEEcCCCCEEEcc
Confidence 99999999999999861 3478889999999999999999977 999999999999999999999999
Q ss_pred cccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhccccCCCc
Q 039533 785 FGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKALPDD 864 (949)
Q Consensus 785 fG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~ 864 (949)
||.+.......... ....++..|+|||++.+..++.++|+|||||++|||++|+.||........
T Consensus 145 fg~~~~~~~~~~~~--~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~------------- 209 (277)
T cd06640 145 FGVAGQLTDTQIKR--NTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRV------------- 209 (277)
T ss_pred cccceeccCCcccc--ccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHhH-------------
Confidence 99997764433211 123578899999999888899999999999999999999999864321100
Q ss_pred hhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHH
Q 039533 865 VMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHE 927 (949)
Q Consensus 865 ~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 927 (949)
...+.....+ ......+..+.+++.+||+.+|++||++.|+++.
T Consensus 210 -~~~~~~~~~~------------------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 253 (277)
T cd06640 210 -LFLIPKNNPP------------------TLTGEFSKPFKEFIDACLNKDPSFRPTAKELLKH 253 (277)
T ss_pred -hhhhhcCCCC------------------CCchhhhHHHHHHHHHHcccCcccCcCHHHHHhC
Confidence 0000000000 0012445678899999999999999999999765
No 244
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=100.00 E-value=1.5e-34 Score=311.37 Aligned_cols=240 Identities=20% Similarity=0.322 Sum_probs=184.1
Q ss_pred eeeeecCceEEEEEEcC------------------------CCEEEEEEEEecCCCcchHHHHHHHHHHHhcCCCcceeE
Q 039533 633 LVGVGSFGSVYKGIIDE------------------------GRTTIAVKVFNLQHHGASRSFIAECKALKSIRHRNLVKV 688 (949)
Q Consensus 633 ~lg~G~~g~Vy~~~~~~------------------------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~ 688 (949)
.||+|+||.||+|.... ....||+|++..........+.+|+.++++++||||+++
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~ 81 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQVSHIHLAFV 81 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcCCCCCeeeE
Confidence 68999999999998531 124589999875544445678899999999999999999
Q ss_pred EeeeecccccCCccceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCC
Q 039533 689 LTACLGADYRGNDFKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLK 768 (949)
Q Consensus 689 ~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlk 768 (949)
++++.... ..++||||+++|+|..++.. ....+++..+..++.|+++||+|||++ +|+|||||
T Consensus 82 ~~~~~~~~-----~~~lv~ey~~~g~L~~~l~~---------~~~~~~~~~~~~i~~qi~~~l~~lH~~---~iiH~dlk 144 (274)
T cd05076 82 HGVCVRGS-----ENIMVEEFVEHGPLDVCLRK---------EKGRVPVAWKITVAQQLASALSYLEDK---NLVHGNVC 144 (274)
T ss_pred EEEEEeCC-----ceEEEEecCCCCcHHHHHHh---------cCCCCCHHHHHHHHHHHHHHHHHHHcC---CccCCCCC
Confidence 99987554 78999999999999999862 234578999999999999999999977 89999999
Q ss_pred CCCeeecCCC-------ceEEeecccceecCCCCCccccccccCccCccCccccCC-CccCCccchHHHHHHHHHHH-hC
Q 039533 769 PSNVLLDDYM-------TARVGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVG-CEVSTNGDVYSYGILLLELV-IG 839 (949)
Q Consensus 769 p~NIll~~~~-------~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDiwSlGvvl~ell-tg 839 (949)
|+||+++..+ .+|++|||.+....... ...++..|+|||.+.+ ..++.++|||||||++||++ +|
T Consensus 145 p~Nill~~~~~~~~~~~~~kl~d~g~~~~~~~~~------~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g 218 (274)
T cd05076 145 AKNILLARLGLAEGTSPFIKLSDPGVSFTALSRE------ERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDG 218 (274)
T ss_pred cccEEEeccCcccCccceeeecCCcccccccccc------ccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCC
Confidence 9999997543 48999999886543221 2347888999998875 56899999999999999995 69
Q ss_pred CCCCccccccCchhhhhccccCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCC
Q 039533 840 KKPIDIMFEGDINLHNFGRKALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRT 919 (949)
Q Consensus 840 ~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP 919 (949)
+.||....... .....+..... + ......+.+++.+||+.+|++||
T Consensus 219 ~~p~~~~~~~~--------------~~~~~~~~~~~-~-------------------~~~~~~~~~li~~cl~~~p~~Rp 264 (274)
T cd05076 219 EVPLKERTPSE--------------KERFYEKKHRL-P-------------------EPSCKELATLISQCLTYEPTQRP 264 (274)
T ss_pred CCCccccChHH--------------HHHHHHhccCC-C-------------------CCCChHHHHHHHHHcccChhhCc
Confidence 99986332111 00011000000 0 01123578899999999999999
Q ss_pred CHHHHHHHHH
Q 039533 920 NMTNVVHELQ 929 (949)
Q Consensus 920 s~~ev~~~L~ 929 (949)
|+.||++.|+
T Consensus 265 s~~~il~~L~ 274 (274)
T cd05076 265 SFRTILRDLT 274 (274)
T ss_pred CHHHHHHhhC
Confidence 9999998873
No 245
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=100.00 E-value=2.4e-34 Score=312.20 Aligned_cols=276 Identities=22% Similarity=0.281 Sum_probs=197.3
Q ss_pred CCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCC--CcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCccce
Q 039533 627 GFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQH--HGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFKA 704 (949)
Q Consensus 627 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 704 (949)
+|++.+.||+|++|.||+|+...+++.||+|+++... ....+.+.+|+.++++++||||+++++++...+ ..+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-----~~~ 75 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQES-----RLY 75 (285)
T ss_pred CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCC-----eEE
Confidence 5788899999999999999998889999999986443 223467889999999999999999999976544 789
Q ss_pred eEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEee
Q 039533 705 SVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVGD 784 (949)
Q Consensus 705 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~D 784 (949)
+||||++ ++|.+++.... ....+++..+..++.|++.||+|||+. +++||||||+||+++.++.+||+|
T Consensus 76 ~v~e~~~-~~l~~~~~~~~-------~~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dl~p~nil~~~~~~~~l~d 144 (285)
T cd07861 76 LIFEFLS-MDLKKYLDSLP-------KGQYMDAELVKSYLYQILQGILFCHSR---RVLHRDLKPQNLLIDNKGVIKLAD 144 (285)
T ss_pred EEEecCC-CCHHHHHhcCC-------CCCcCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCCHHHEEEcCCCcEEECc
Confidence 9999997 68988886321 224689999999999999999999977 999999999999999999999999
Q ss_pred cccceecCCCCCccccccccCccCccCccccCCC-ccCCccchHHHHHHHHHHHhCCCCCccccccCchhh--hhccccC
Q 039533 785 FGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGC-EVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLH--NFGRKAL 861 (949)
Q Consensus 785 fG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~--~~~~~~~ 861 (949)
||++......... .....++..|+|||++.+. .++.++|||||||++|||+||+.||......+.... .......
T Consensus 145 fg~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~ 222 (285)
T cd07861 145 FGLARAFGIPVRV--YTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPT 222 (285)
T ss_pred ccceeecCCCccc--ccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCC
Confidence 9999765433221 1123478899999987654 478999999999999999999999964322111000 0000000
Q ss_pred CCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 039533 862 PDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVH 926 (949)
Q Consensus 862 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 926 (949)
........+ ..+...... ..............+.++.+++.+|++.||++|||+.||++
T Consensus 223 ~~~~~~~~~---~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~ 281 (285)
T cd07861 223 EDVWPGVTS---LPDYKNTFP---KWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALN 281 (285)
T ss_pred hhhhhcchh---hHHHHhhcc---ccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhc
Confidence 000000000 000000000 00000000001124566789999999999999999999875
No 246
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=100.00 E-value=3.2e-34 Score=304.78 Aligned_cols=247 Identities=26% Similarity=0.377 Sum_probs=192.6
Q ss_pred CeeeeecCceEEEEEEcCCCEEEEEEEEecCCCc-chHHHHHHHHHHHhcCCCcceeEEeeeecccccCCccceeEeeec
Q 039533 632 NLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHG-ASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFKASVYEFM 710 (949)
Q Consensus 632 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~ 710 (949)
++||+|+||.||+|... +++.||+|+++..... ....+.+|++++++++||||+++++++...+ ..++||||+
T Consensus 1 ~~ig~g~~g~vy~~~~~-~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-----~~~lv~e~~ 74 (250)
T cd05085 1 ELLGKGNFGEVFKGTLK-DKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQ-----PIYIVMELV 74 (250)
T ss_pred CccCCCCCceEEEEEec-CCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCC-----ccEEEEECC
Confidence 47899999999999876 6789999998654322 2346889999999999999999999976544 789999999
Q ss_pred cCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEeeccccee
Q 039533 711 HYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVGDFGLARI 790 (949)
Q Consensus 711 ~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~DfG~a~~ 790 (949)
++++|.+++.. ....+++..+..++.|++.||.|+|++ +++||||||+||++++++.+||+|||++..
T Consensus 75 ~~~~L~~~~~~---------~~~~~~~~~~~~~~~~i~~~l~~lH~~---~~~H~dl~p~nili~~~~~~~l~d~g~~~~ 142 (250)
T cd05085 75 PGGDFLSFLRK---------KKDELKTKQLVKFALDAAAGMAYLESK---NCIHRDLAARNCLVGENNVLKISDFGMSRQ 142 (250)
T ss_pred CCCcHHHHHHh---------cCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccChheEEEcCCCeEEECCCcccee
Confidence 99999999862 123478999999999999999999977 999999999999999999999999999976
Q ss_pred cCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHh-CCCCCccccccCchhhhhccccCCCchhhhc
Q 039533 791 LSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVI-GKKPIDIMFEGDINLHNFGRKALPDDVMDIV 869 (949)
Q Consensus 791 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 869 (949)
......... ....++..|+|||+..+..++.++||||||+++||+++ |..||....... .... +
T Consensus 143 ~~~~~~~~~-~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~--~~~~------------~ 207 (250)
T cd05085 143 EDDGIYSSS-GLKQIPIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQ--AREQ------------V 207 (250)
T ss_pred ccccccccC-CCCCCcccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHHH--HHHH------------H
Confidence 443222111 11234678999999988889999999999999999998 999986332111 0000 0
Q ss_pred ccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHH
Q 039533 870 DSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHELQ 929 (949)
Q Consensus 870 d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~ 929 (949)
....... ....++..+.+++.+|++.+|++||++.|++++|.
T Consensus 208 ~~~~~~~------------------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~ 249 (250)
T cd05085 208 EKGYRMS------------------CPQKCPDDVYKVMQRCWDYKPENRPKFSELQKELA 249 (250)
T ss_pred HcCCCCC------------------CCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhc
Confidence 0000000 00123456889999999999999999999999874
No 247
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=100.00 E-value=6e-35 Score=311.83 Aligned_cols=240 Identities=23% Similarity=0.387 Sum_probs=185.6
Q ss_pred CeeeeecCceEEEEEEcCCCE-------EEEEEEEecCCCcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCccce
Q 039533 632 NLVGVGSFGSVYKGIIDEGRT-------TIAVKVFNLQHHGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFKA 704 (949)
Q Consensus 632 ~~lg~G~~g~Vy~~~~~~~~~-------~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 704 (949)
+.||+|+||.||+|.....+. .||+|++........+.+.+|+.++++++||||+++++++...+ ..+
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~-----~~~ 75 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLVLNYGVCVCGD-----ESI 75 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCCCChhheeeEEEeCC-----CcE
Confidence 468999999999999864443 48889886554445567889999999999999999999986544 689
Q ss_pred eEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCc-----
Q 039533 705 SVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMT----- 779 (949)
Q Consensus 705 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~----- 779 (949)
+||||+++|+|.+++.. ....+++..++.++.|++.|++|||+. +|+||||||+||+++.++.
T Consensus 76 lv~e~~~~g~L~~~l~~---------~~~~~~~~~~~~~~~qi~~~l~~lH~~---~iiH~dlkp~nili~~~~~~~~~~ 143 (258)
T cd05078 76 MVQEYVKFGSLDTYLKK---------NKNLINISWKLEVAKQLAWALHFLEDK---GLTHGNVCAKNVLLIREEDRKTGN 143 (258)
T ss_pred EEEecCCCCcHHHHHhc---------CCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCccceEEEecccccccCC
Confidence 99999999999999972 123578999999999999999999977 9999999999999987765
Q ss_pred ---eEEeecccceecCCCCCccccccccCccCccCccccCCC-ccCCccchHHHHHHHHHHHhCC-CCCccccccCchhh
Q 039533 780 ---ARVGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGC-EVSTNGDVYSYGILLLELVIGK-KPIDIMFEGDINLH 854 (949)
Q Consensus 780 ---~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDiwSlGvvl~elltg~-~Pf~~~~~~~~~~~ 854 (949)
++++|||.+....... ...++..|+|||++.+. .++.++|||||||++|||++|. .||....... .
T Consensus 144 ~~~~~l~d~g~~~~~~~~~------~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~~--~- 214 (258)
T cd05078 144 PPFIKLSDPGISITVLPKE------ILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQK--K- 214 (258)
T ss_pred CceEEecccccccccCCch------hccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHHH--H-
Confidence 6999999887554321 23478899999998874 5789999999999999999985 5553211100 0
Q ss_pred hhccccCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHH
Q 039533 855 NFGRKALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHEL 928 (949)
Q Consensus 855 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L 928 (949)
......... .+ ......+.+++.+|++.+|++|||++|+++.|
T Consensus 215 -----------~~~~~~~~~-~~-------------------~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l 257 (258)
T cd05078 215 -----------LQFYEDRHQ-LP-------------------APKWTELANLINQCMDYEPDFRPSFRAIIRDL 257 (258)
T ss_pred -----------HHHHHcccc-CC-------------------CCCcHHHHHHHHHHhccChhhCCCHHHHHHhc
Confidence 000000000 00 01124578999999999999999999999986
No 248
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=3.6e-35 Score=312.05 Aligned_cols=252 Identities=21% Similarity=0.280 Sum_probs=194.5
Q ss_pred cCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEec--CCCcchHHHHHHHHHHHhc-CCCcceeEEeeeecccccCCcc
Q 039533 626 SGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNL--QHHGASRSFIAECKALKSI-RHRNLVKVLTACLGADYRGNDF 702 (949)
Q Consensus 626 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~--~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~ 702 (949)
..|++.+.||+||.+.||++... +.+.+|+|.+.. .+......|.+|+..|.++ .|.+||++++|-...+ .
T Consensus 361 ~~Yeilk~iG~GGSSkV~kV~~s-~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~-----~ 434 (677)
T KOG0596|consen 361 REYEILKQIGSGGSSKVFKVLNS-DKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDG-----Y 434 (677)
T ss_pred chhhHHHhhcCCCcceeeeeecC-CCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCc-----e
Confidence 45888999999999999999987 456677776642 2334457899999999999 4999999999966544 8
Q ss_pred ceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEE
Q 039533 703 KASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARV 782 (949)
Q Consensus 703 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl 782 (949)
.|+||||=+ .+|..+|.... .....-.++.+..|++.|+.++|.+ ||||.||||.|+++-. |.+||
T Consensus 435 lYmvmE~Gd-~DL~kiL~k~~---------~~~~~~~lk~ywkqML~aV~~IH~~---gIVHSDLKPANFLlVk-G~LKL 500 (677)
T KOG0596|consen 435 LYMVMECGD-IDLNKILKKKK---------SIDPDWFLKFYWKQMLLAVKTIHQH---GIVHSDLKPANFLLVK-GRLKL 500 (677)
T ss_pred EEEEeeccc-ccHHHHHHhcc---------CCCchHHHHHHHHHHHHHHHHHHHh---ceeecCCCcccEEEEe-eeEEe
Confidence 999999875 49999997432 2223227888999999999999977 9999999999999976 79999
Q ss_pred eecccceecCCCCCccccccccCccCccCccccCCC-----------ccCCccchHHHHHHHHHHHhCCCCCccccccCc
Q 039533 783 GDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGC-----------EVSTNGDVYSYGILLLELVIGKKPIDIMFEGDI 851 (949)
Q Consensus 783 ~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----------~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~ 851 (949)
+|||+|..+..+.+.......+||+.||+||.+... +.+.++||||+|||+|+|+.|+.||........
T Consensus 501 IDFGIA~aI~~DTTsI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~n~~a 580 (677)
T KOG0596|consen 501 IDFGIANAIQPDTTSIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQIINQIA 580 (677)
T ss_pred eeechhcccCccccceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHHHHHH
Confidence 999999999888887777778899999999986532 367899999999999999999999964321111
Q ss_pred hhhhhccccCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 039533 852 NLHNFGRKALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVH 926 (949)
Q Consensus 852 ~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 926 (949)
.+..+.++.-.-+.. .. ....++.++++.|+++||.+|||..|+++
T Consensus 581 ------------Kl~aI~~P~~~Iefp----------------~~-~~~~~li~~mK~CL~rdPkkR~si~eLLq 626 (677)
T KOG0596|consen 581 ------------KLHAITDPNHEIEFP----------------DI-PENDELIDVMKCCLARDPKKRWSIPELLQ 626 (677)
T ss_pred ------------HHHhhcCCCcccccc----------------CC-CCchHHHHHHHHHHhcCcccCCCcHHHhc
Confidence 112222221110000 00 00123889999999999999999999975
No 249
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=100.00 E-value=2.2e-34 Score=311.97 Aligned_cols=266 Identities=22% Similarity=0.273 Sum_probs=204.9
Q ss_pred cCHHHHHHHhcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCCcchHHHHHHHHHHHhc-CCCcceeEEeeeec
Q 039533 616 LSYQDLYNATSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHGASRSFIAECKALKSI-RHRNLVKVLTACLG 694 (949)
Q Consensus 616 ~~~~~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~ 694 (949)
.++.++....+.|++.+.||+|+||.||+|++..+++.||+|++.... .....+..|+.+++++ +|+||+++++++..
T Consensus 6 ~~~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 84 (282)
T cd06636 6 IDLSALRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTE-DEEEEIKLEINMLKKYSHHRNIATYYGAFIK 84 (282)
T ss_pred hhhhhhcChhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecCh-HHHHHHHHHHHHHHHhcCCCcEEEEeeehhc
Confidence 355666677889999999999999999999998889999999986543 2345688899999998 69999999999864
Q ss_pred ccc-cCCccceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCee
Q 039533 695 ADY-RGNDFKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVL 773 (949)
Q Consensus 695 ~~~-~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIl 773 (949)
... ......++||||+++|+|.+++... ....+++..+..++.|++.|++|||+. +|+||||||+||+
T Consensus 85 ~~~~~~~~~~~iv~e~~~~~~L~~~~~~~--------~~~~~~~~~~~~~~~qi~~al~~LH~~---~ivH~dl~~~nil 153 (282)
T cd06636 85 KSPPGHDDQLWLVMEFCGAGSVTDLVKNT--------KGNALKEDWIAYICREILRGLAHLHAH---KVIHRDIKGQNVL 153 (282)
T ss_pred ccccCCCCEEEEEEEeCCCCcHHHHHHHc--------cCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEE
Confidence 321 2345789999999999999998632 123477888999999999999999977 8999999999999
Q ss_pred ecCCCceEEeecccceecCCCCCccccccccCccCccCccccC-----CCccCCccchHHHHHHHHHHHhCCCCCccccc
Q 039533 774 LDDYMTARVGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGV-----GCEVSTNGDVYSYGILLLELVIGKKPIDIMFE 848 (949)
Q Consensus 774 l~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~ 848 (949)
+++++.++|+|||.+......... .....|+..|+|||++. +..++.++|||||||++|||++|+.||.....
T Consensus 154 i~~~~~~~l~dfg~~~~~~~~~~~--~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~ 231 (282)
T cd06636 154 LTENAEVKLVDFGVSAQLDRTVGR--RNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHP 231 (282)
T ss_pred ECCCCCEEEeeCcchhhhhccccC--CCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCH
Confidence 999999999999998765332211 12345899999999875 34578899999999999999999999853311
Q ss_pred cCchhhhhccccCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 039533 849 GDINLHNFGRKALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVH 926 (949)
Q Consensus 849 ~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 926 (949)
.... ........ ... ....++..+.+++.+||+.||.+||++.|+++
T Consensus 232 ~~~~-------------~~~~~~~~-~~~-----------------~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~ 278 (282)
T cd06636 232 MRAL-------------FLIPRNPP-PKL-----------------KSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLK 278 (282)
T ss_pred Hhhh-------------hhHhhCCC-CCC-----------------cccccCHHHHHHHHHHhCCChhhCcCHHHHhc
Confidence 1000 00000000 000 00133456899999999999999999999874
No 250
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=100.00 E-value=1.7e-34 Score=319.68 Aligned_cols=202 Identities=24% Similarity=0.293 Sum_probs=171.4
Q ss_pred cCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecC---CCcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCcc
Q 039533 626 SGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQ---HHGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDF 702 (949)
Q Consensus 626 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 702 (949)
++|++.+.||+|+||.||+|+...+++.||+|++... .....+.+.+|+.++..++|+||+++++++...+ .
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~-----~ 75 (331)
T cd05597 1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDEN-----N 75 (331)
T ss_pred CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCC-----e
Confidence 4789999999999999999999988999999999642 2223456889999999999999999999876444 7
Q ss_pred ceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEE
Q 039533 703 KASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARV 782 (949)
Q Consensus 703 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl 782 (949)
.++||||+++|+|.+++.. ....+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||
T Consensus 76 ~~lv~e~~~g~~L~~~l~~---------~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~kl 143 (331)
T cd05597 76 LYLVMDYYVGGDLLTLLSK---------FEDRLPEDMARFYLAEMVLAIDSVHQL---GYVHRDIKPDNVLLDKNGHIRL 143 (331)
T ss_pred EEEEEecCCCCcHHHHHHH---------hcCCCCHHHHHHHHHHHHHHHHHHHhC---CeEECCCCHHHEEECCCCCEEE
Confidence 8999999999999999862 134588899999999999999999977 8999999999999999999999
Q ss_pred eecccceecCCCCCccccccccCccCccCccccCC-----CccCCccchHHHHHHHHHHHhCCCCCcc
Q 039533 783 GDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVG-----CEVSTNGDVYSYGILLLELVIGKKPIDI 845 (949)
Q Consensus 783 ~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~sDiwSlGvvl~elltg~~Pf~~ 845 (949)
+|||++........... ....||+.|+|||++.+ ..++.++|||||||++|||++|+.||..
T Consensus 144 ~Dfg~~~~~~~~~~~~~-~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~ 210 (331)
T cd05597 144 ADFGSCLRLLADGTVQS-NVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYA 210 (331)
T ss_pred EECCceeecCCCCCccc-cceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCC
Confidence 99999977654332211 12458999999999863 4578899999999999999999999953
No 251
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=100.00 E-value=2.5e-34 Score=307.02 Aligned_cols=250 Identities=24% Similarity=0.355 Sum_probs=196.5
Q ss_pred CeeeeecCceEEEEEEcC-CC--EEEEEEEEecCCC-cchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCccceeEe
Q 039533 632 NLVGVGSFGSVYKGIIDE-GR--TTIAVKVFNLQHH-GASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFKASVY 707 (949)
Q Consensus 632 ~~lg~G~~g~Vy~~~~~~-~~--~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~ 707 (949)
++||+|++|.||+|.+.. ++ ..||+|+++.... ...+.+.+|+.++++++||||+++++++.. ...++||
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~------~~~~~v~ 74 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLT------HPLMMVT 74 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEcC------CeEEEEE
Confidence 468999999999999864 23 3699999976555 456789999999999999999999998754 3789999
Q ss_pred eeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEeeccc
Q 039533 708 EFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVGDFGL 787 (949)
Q Consensus 708 e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~DfG~ 787 (949)
||+++++|.+++.... ...+++..+..++.|++.||+|||+. +++||||||+||+++.++.+||+|||.
T Consensus 75 e~~~~~~L~~~l~~~~--------~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~di~p~nil~~~~~~~kl~dfg~ 143 (257)
T cd05040 75 ELAPLGSLLDRLRKDA--------LGHFLISTLCDYAVQIANGMRYLESK---RFIHRDLAARNILLASDDKVKIGDFGL 143 (257)
T ss_pred EecCCCcHHHHHHhcc--------cccCcHHHHHHHHHHHHHHHHHHHhC---CccccccCcccEEEecCCEEEeccccc
Confidence 9999999999997311 14589999999999999999999977 999999999999999999999999999
Q ss_pred ceecCCCCC-ccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHh-CCCCCccccccCchhhhhccccCCCch
Q 039533 788 ARILSPDHT-QTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVI-GKKPIDIMFEGDINLHNFGRKALPDDV 865 (949)
Q Consensus 788 a~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~ 865 (949)
++....... ........++..|+|||++.+..++.++|||||||++|||++ |+.||......+ .......
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~--~~~~~~~------ 215 (257)
T cd05040 144 MRALPQNEDHYVMEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQ--ILKKIDK------ 215 (257)
T ss_pred cccccccccceecccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHHH--HHHHHHh------
Confidence 987654322 111113447789999999998899999999999999999999 999985331111 0000000
Q ss_pred hhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHH
Q 039533 866 MDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHELQ 929 (949)
Q Consensus 866 ~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~ 929 (949)
.... .......+..+.+++.+|++.+|++||++.||++.|.
T Consensus 216 ----~~~~-------------------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 256 (257)
T cd05040 216 ----EGER-------------------LERPEACPQDIYNVMLQCWAHNPADRPTFAALREFLP 256 (257)
T ss_pred ----cCCc-------------------CCCCccCCHHHHHHHHHHCCCCcccCCCHHHHHHHhc
Confidence 0000 0001133557889999999999999999999999875
No 252
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=100.00 E-value=3.7e-34 Score=304.50 Aligned_cols=248 Identities=27% Similarity=0.409 Sum_probs=194.7
Q ss_pred CeeeeecCceEEEEEEcCCCEEEEEEEEecCCCc-chHHHHHHHHHHHhcCCCcceeEEeeeecccccCCccceeEeeec
Q 039533 632 NLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHG-ASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFKASVYEFM 710 (949)
Q Consensus 632 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~ 710 (949)
++||+|+||.||+|.+.. ++.||+|+++..... ....+.+|++++++++|+||+++++++.... ..++||||+
T Consensus 1 ~~lg~g~~g~v~~~~~~~-~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~-----~~~~v~e~~ 74 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKG-NTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQ-----PIYIVMELV 74 (251)
T ss_pred CccccCCCceEEEEEEeC-CCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCC-----CeEEEEEcC
Confidence 478999999999999986 899999998755433 4467899999999999999999999876544 789999999
Q ss_pred cCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEeeccccee
Q 039533 711 HYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVGDFGLARI 790 (949)
Q Consensus 711 ~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~DfG~a~~ 790 (949)
++++|.+++.. ....+++..+..++.|++.|++|||++ +++||||||+||+++.++.+||+|||.++.
T Consensus 75 ~~~~l~~~l~~---------~~~~~~~~~~~~~~~~~~~~l~~lH~~---~i~h~di~p~nili~~~~~~~l~d~g~~~~ 142 (251)
T cd05041 75 PGGSLLTFLRK---------KKNRLTVKKLLQMSLDAAAGMEYLESK---NCIHRDLAARNCLVGENNVLKISDFGMSRE 142 (251)
T ss_pred CCCcHHHHHHh---------cCCCCCHHHHHHHHHHHHHHHHHHHhC---CEehhhcCcceEEEcCCCcEEEeecccccc
Confidence 99999999862 123578889999999999999999977 899999999999999999999999999986
Q ss_pred cCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHh-CCCCCccccccCchhhhhccccCCCchhhhc
Q 039533 791 LSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVI-GKKPIDIMFEGDINLHNFGRKALPDDVMDIV 869 (949)
Q Consensus 791 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 869 (949)
..............++..|+|||.+.+..++.++|||||||++|||+| |..||....... ..+.+
T Consensus 143 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~--------------~~~~~ 208 (251)
T cd05041 143 EEGGIYTVSDGLKQIPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQ--------------TRERI 208 (251)
T ss_pred ccCCcceeccccCcceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHHH--------------HHHHH
Confidence 543222111111224567999999988889999999999999999999 888885332110 00111
Q ss_pred ccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHH
Q 039533 870 DSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHELQ 929 (949)
Q Consensus 870 d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~ 929 (949)
....... .....+..+.+++.+|+..+|++|||+.||++.|+
T Consensus 209 ~~~~~~~------------------~~~~~~~~~~~li~~~l~~~p~~Rp~~~ell~~l~ 250 (251)
T cd05041 209 ESGYRMP------------------APQLCPEEIYRLMLQCWAYDPENRPSFSEIYNELQ 250 (251)
T ss_pred hcCCCCC------------------CCccCCHHHHHHHHHHhccChhhCcCHHHHHHHhh
Confidence 1000000 00123457899999999999999999999999886
No 253
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=100.00 E-value=2.6e-34 Score=309.04 Aligned_cols=257 Identities=21% Similarity=0.307 Sum_probs=185.8
Q ss_pred CeeeeecCceEEEEEEcC--CCEEEEEEEEecCCC-cchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCccceeEee
Q 039533 632 NLVGVGSFGSVYKGIIDE--GRTTIAVKVFNLQHH-GASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFKASVYE 708 (949)
Q Consensus 632 ~~lg~G~~g~Vy~~~~~~--~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e 708 (949)
+.||+|+||.||+|.... ....+|+|.+..... .....+.+|++.++.++||||+++++++...+ ..++|||
T Consensus 1 ~~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~-----~~~lv~e 75 (269)
T cd05042 1 DEIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESI-----PYLLVLE 75 (269)
T ss_pred CcCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCC-----ceEEEEE
Confidence 368999999999997642 345788888754332 23456889999999999999999999976544 7899999
Q ss_pred eccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEeecccc
Q 039533 709 FMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVGDFGLA 788 (949)
Q Consensus 709 ~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~DfG~a 788 (949)
|+++|+|.+++...... .....++.....++.|++.|++|||+. +|+||||||+||++++++.+||+|||++
T Consensus 76 ~~~~g~L~~~l~~~~~~-----~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~kl~dfg~~ 147 (269)
T cd05042 76 FCPLGDLKNYLRSNRGM-----VAQMAQKDVLQRMACEVASGLLWLHQA---DFIHSDLALRNCQLTADLSVKIGDYGLA 147 (269)
T ss_pred eCCCCcHHHHHHhcccc-----ccccccHHHHHHHHHHHHHHHHHHHhc---CEecccccHhheEecCCCcEEEeccccc
Confidence 99999999999743211 123356778899999999999999977 8999999999999999999999999998
Q ss_pred eecCCCCCccccccccCccCccCccccC-------CCccCCccchHHHHHHHHHHHh-CCCCCccccccCchhhhhcccc
Q 039533 789 RILSPDHTQTSSFSVKGSLGYIAPEYGV-------GCEVSTNGDVYSYGILLLELVI-GKKPIDIMFEGDINLHNFGRKA 860 (949)
Q Consensus 789 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~-------~~~~~~~sDiwSlGvvl~ellt-g~~Pf~~~~~~~~~~~~~~~~~ 860 (949)
................++..|+|||+.. ...++.++|||||||++|||++ |..||......+ ......
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~-~~~~~~--- 223 (269)
T cd05042 148 LEQYPEDYYITKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQ-VLKQVV--- 223 (269)
T ss_pred cccccchheeccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHH-HHHHHh---
Confidence 7643332221122334677899999864 2356889999999999999999 788885432111 000000
Q ss_pred CCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHH
Q 039533 861 LPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHELQ 929 (949)
Q Consensus 861 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~ 929 (949)
.....++.++... ...+..+.+++..|+ .||++|||++||++.|.
T Consensus 224 -~~~~~~~~~~~~~----------------------~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~~l~ 268 (269)
T cd05042 224 -REQDIKLPKPQLD----------------------LKYSDRWYEVMQFCW-LDPETRPTAEEVHELLT 268 (269)
T ss_pred -hccCccCCCCccc----------------------ccCCHHHHHHHHHHh-cCcccccCHHHHHHHhc
Confidence 0000000011000 123345667788888 59999999999999873
No 254
>PHA03209 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=7.7e-35 Score=325.57 Aligned_cols=193 Identities=22% Similarity=0.339 Sum_probs=163.8
Q ss_pred HhcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCCcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCccc
Q 039533 624 ATSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFK 703 (949)
Q Consensus 624 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 703 (949)
...+|.+.+.||+|+||.||+|++..+++.||+|+.... ....|+.++++++||||+++++++.... ..
T Consensus 64 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~------~~~~E~~~l~~l~h~~iv~~~~~~~~~~-----~~ 132 (357)
T PHA03209 64 ASLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG------TTLIEAMLLQNVNHPSVIRMKDTLVSGA-----IT 132 (357)
T ss_pred hhcCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc------ccHHHHHHHHhCCCCCCcChhheEEeCC-----ee
Confidence 346899999999999999999999988899999975322 2356999999999999999999976544 78
Q ss_pred eeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEe
Q 039533 704 ASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVG 783 (949)
Q Consensus 704 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~ 783 (949)
++||||+. ++|.+++.. ....+++..+..|+.|++.||+|||++ +|+||||||+||+++.++.+||+
T Consensus 133 ~lv~e~~~-~~l~~~l~~---------~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~kl~ 199 (357)
T PHA03209 133 CMVLPHYS-SDLYTYLTK---------RSRPLPIDQALIIEKQILEGLRYLHAQ---RIIHRDVKTENIFINDVDQVCIG 199 (357)
T ss_pred EEEEEccC-CcHHHHHHh---------ccCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEe
Confidence 99999995 688888852 234689999999999999999999977 89999999999999999999999
Q ss_pred ecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCC
Q 039533 784 DFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPI 843 (949)
Q Consensus 784 DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf 843 (949)
|||.++....... .....||..|+|||++.+..++.++|||||||++|||+++..|+
T Consensus 200 DfG~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~ 256 (357)
T PHA03209 200 DLGAAQFPVVAPA---FLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTI 256 (357)
T ss_pred cCccccccccCcc---cccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCcc
Confidence 9999975332221 12345899999999999989999999999999999999865554
No 255
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-35 Score=315.73 Aligned_cols=244 Identities=25% Similarity=0.346 Sum_probs=195.2
Q ss_pred CCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCCc---chHHHHHHHHHHHhcCCCcceeEEeeeecccccCCccce
Q 039533 628 FSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHG---ASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFKA 704 (949)
Q Consensus 628 y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 704 (949)
|.-.+.||.|+||.||-|++..+.+.||||.+...... .-.++..|+..|.+++|||++.+-|+|.... ..|
T Consensus 28 f~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~-----TaW 102 (948)
T KOG0577|consen 28 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREH-----TAW 102 (948)
T ss_pred HHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccc-----hHH
Confidence 44457899999999999999999999999999754332 2357889999999999999999999976433 789
Q ss_pred eEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEee
Q 039533 705 SVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVGD 784 (949)
Q Consensus 705 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~D 784 (949)
+|||||- |+-.|.+. ...+++.+.++..|+.+.+.||+|||+. +.||||||..|||+++.|.|||+|
T Consensus 103 LVMEYCl-GSAsDlle---------VhkKplqEvEIAAi~~gaL~gLaYLHS~---~~IHRDiKAGNILLse~g~VKLaD 169 (948)
T KOG0577|consen 103 LVMEYCL-GSASDLLE---------VHKKPLQEVEIAAITHGALQGLAYLHSH---NRIHRDIKAGNILLSEPGLVKLAD 169 (948)
T ss_pred HHHHHHh-ccHHHHHH---------HHhccchHHHHHHHHHHHHHHHHHHHHh---hHHhhhccccceEecCCCeeeecc
Confidence 9999995 57777775 2346688899999999999999999988 899999999999999999999999
Q ss_pred cccceecCCCCCccccccccCccCccCccccC---CCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhccccC
Q 039533 785 FGLARILSPDHTQTSSFSVKGSLGYIAPEYGV---GCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKAL 861 (949)
Q Consensus 785 fG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~ 861 (949)
||.|....+.. .++||+.|||||++. .+.|+-|+||||+|++..|+.-.++|+-.+......+ ..+..
T Consensus 170 FGSAsi~~PAn------sFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAMSALY-HIAQN-- 240 (948)
T KOG0577|consen 170 FGSASIMAPAN------SFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALY-HIAQN-- 240 (948)
T ss_pred ccchhhcCchh------cccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchHHHHHH-HHHhc--
Confidence 99998876654 467999999999855 4679999999999999999999999975331110000 00000
Q ss_pred CCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 039533 862 PDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVH 926 (949)
Q Consensus 862 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 926 (949)
+ .+.+. ..+....+.+++..|++.-|++|||.+++++
T Consensus 241 --e-----sPtLq---------------------s~eWS~~F~~Fvd~CLqKipqeRptse~ll~ 277 (948)
T KOG0577|consen 241 --E-----SPTLQ---------------------SNEWSDYFRNFVDSCLQKIPQERPTSEELLK 277 (948)
T ss_pred --C-----CCCCC---------------------CchhHHHHHHHHHHHHhhCcccCCcHHHHhh
Confidence 0 00010 1244667889999999999999999998864
No 256
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=100.00 E-value=4.4e-34 Score=306.70 Aligned_cols=253 Identities=21% Similarity=0.288 Sum_probs=194.0
Q ss_pred cCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCC-----cchHHHHHHHHHHHhcCCCcceeEEeeeecccccCC
Q 039533 626 SGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHH-----GASRSFIAECKALKSIRHRNLVKVLTACLGADYRGN 700 (949)
Q Consensus 626 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-----~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 700 (949)
.+|+..+.||+|+||.||+|.+..+++.||+|+++.... ...+.+.+|+.++++++||||+++++++... ..
T Consensus 2 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~---~~ 78 (266)
T cd06651 2 INWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDR---AE 78 (266)
T ss_pred CCccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcC---CC
Confidence 478999999999999999999988899999999864321 2235688899999999999999999987532 23
Q ss_pred ccceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCce
Q 039533 701 DFKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTA 780 (949)
Q Consensus 701 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~ 780 (949)
...+++|||+++++|.+++. ....+++.....++.|++.||+|||+. +|+||||||+||+++.++.+
T Consensus 79 ~~~~l~~e~~~~~~L~~~l~----------~~~~l~~~~~~~~~~qi~~~l~~LH~~---~i~H~~l~p~nil~~~~~~~ 145 (266)
T cd06651 79 KTLTIFMEYMPGGSVKDQLK----------AYGALTESVTRKYTRQILEGMSYLHSN---MIVHRDIKGANILRDSAGNV 145 (266)
T ss_pred CEEEEEEeCCCCCcHHHHHH----------HcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCE
Confidence 36789999999999999986 223478889999999999999999977 89999999999999999999
Q ss_pred EEeecccceecCCCCCc-cccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhccc
Q 039533 781 RVGDFGLARILSPDHTQ-TSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRK 859 (949)
Q Consensus 781 kl~DfG~a~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~ 859 (949)
||+|||+++........ .......++..|+|||++.+..++.++|||||||++|||++|+.||....... .
T Consensus 146 ~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~~-~------- 217 (266)
T cd06651 146 KLGDFGASKRLQTICMSGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEAMA-A------- 217 (266)
T ss_pred EEccCCCccccccccccCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccchHH-H-------
Confidence 99999999765432111 11112448899999999998889999999999999999999999986331110 0
Q ss_pred cCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 039533 860 ALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVH 926 (949)
Q Consensus 860 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 926 (949)
..........+.. .....+.+.+++ .|+..+|++||+++||++
T Consensus 218 -----~~~~~~~~~~~~~------------------~~~~~~~~~~li-~~~~~~p~~Rp~~~eil~ 260 (266)
T cd06651 218 -----IFKIATQPTNPQL------------------PSHISEHARDFL-GCIFVEARHRPSAEELLR 260 (266)
T ss_pred -----HHHHhcCCCCCCC------------------chhcCHHHHHHH-HHhcCChhhCcCHHHHhc
Confidence 0000000000000 012233455666 688899999999999975
No 257
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=100.00 E-value=3.3e-34 Score=309.02 Aligned_cols=265 Identities=24% Similarity=0.397 Sum_probs=200.3
Q ss_pred CCCCCeeeeecCceEEEEEEcC---CCEEEEEEEEecCC--CcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCC-c
Q 039533 628 FSSANLVGVGSFGSVYKGIIDE---GRTTIAVKVFNLQH--HGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGN-D 701 (949)
Q Consensus 628 y~~~~~lg~G~~g~Vy~~~~~~---~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~-~ 701 (949)
|.+.+.||+|+||.||+|.+.. +++.||||++.... ....+++.+|++++++++||||+++++++......+. .
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 80 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLP 80 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCccc
Confidence 6678899999999999998643 46899999987543 2334678899999999999999999998765432211 2
Q ss_pred cceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceE
Q 039533 702 FKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTAR 781 (949)
Q Consensus 702 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~k 781 (949)
..++++||+++|+|.+++...... .....+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+|
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~----~~~~~l~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~nili~~~~~~k 153 (273)
T cd05074 81 IPMVILPFMKHGDLHTFLLMSRIG----EEPFTLPLQTLVRFMIDIASGMEYLSSK---NFIHRDLAARNCMLNENMTVC 153 (273)
T ss_pred ceEEEEecCCCCcHHHHHHHhccc----CCCCCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccchhhEEEcCCCCEE
Confidence 347889999999999887521111 1223578999999999999999999977 899999999999999999999
Q ss_pred EeecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHh-CCCCCccccccCchhhhhcccc
Q 039533 782 VGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVI-GKKPIDIMFEGDINLHNFGRKA 860 (949)
Q Consensus 782 l~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~ellt-g~~Pf~~~~~~~~~~~~~~~~~ 860 (949)
|+|||.++...............++..|++||......++.++|||||||++|||++ |++||...... .......
T Consensus 154 l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~~--~~~~~~~-- 229 (273)
T cd05074 154 VADFGLSKKIYSGDYYRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVENS--EIYNYLI-- 229 (273)
T ss_pred ECcccccccccCCcceecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCHH--HHHHHHH--
Confidence 999999987644332222222345678999999988889999999999999999999 88888533211 1100000
Q ss_pred CCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHHh
Q 039533 861 LPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHELQSI 931 (949)
Q Consensus 861 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i 931 (949)
....... ....+..+.+++.+|++.+|++||++.|+++.|+++
T Consensus 230 ---------~~~~~~~-------------------~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~l~~~ 272 (273)
T cd05074 230 ---------KGNRLKQ-------------------PPDCLEDVYELMCQCWSPEPKCRPSFQHLRDQLELI 272 (273)
T ss_pred ---------cCCcCCC-------------------CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 0000000 012345688999999999999999999999999876
No 258
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=100.00 E-value=2.9e-34 Score=309.74 Aligned_cols=262 Identities=22% Similarity=0.311 Sum_probs=203.8
Q ss_pred HHhcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCCcchHHHHHHHHHHHhc-CCCcceeEEeeeecccc-cCC
Q 039533 623 NATSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHGASRSFIAECKALKSI-RHRNLVKVLTACLGADY-RGN 700 (949)
Q Consensus 623 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~-~~~ 700 (949)
.++++|++.+.||+|++|.||+|.+..+++.+++|++..... ..+.+.+|+.+++++ +|+||+++++++..... ...
T Consensus 3 ~~~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~ 81 (275)
T cd06608 3 DPTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIED-EEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGND 81 (275)
T ss_pred CchhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCch-hHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcc
Confidence 356899999999999999999999988889999999875543 346789999999999 79999999999876543 234
Q ss_pred ccceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCce
Q 039533 701 DFKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTA 780 (949)
Q Consensus 701 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~ 780 (949)
...++||||+++++|.+++.... .....+++..+..++.|++.||+|||+. +++||||+|+||++++++.+
T Consensus 82 ~~~~lv~e~~~~~~L~~~~~~~~------~~~~~~~~~~~~~~~~ql~~al~~lH~~---~i~H~~l~p~ni~~~~~~~~ 152 (275)
T cd06608 82 DQLWLVMELCGGGSVTDLVKGLR------KKGKRLKEEWIAYILRETLRGLAYLHEN---KVIHRDIKGQNILLTKNAEV 152 (275)
T ss_pred eEEEEEEEcCCCCcHHHHHHHHh------hcCCCCCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHHHEEEccCCeE
Confidence 56899999999999999986321 1235688999999999999999999977 89999999999999999999
Q ss_pred EEeecccceecCCCCCccccccccCccCccCccccCC-----CccCCccchHHHHHHHHHHHhCCCCCccccccCchhhh
Q 039533 781 RVGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVG-----CEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHN 855 (949)
Q Consensus 781 kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~ 855 (949)
||+|||.+......... .....|+..|+|||++.. ..++.++|||||||++|||++|+.||....... ...
T Consensus 153 ~l~d~~~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~-~~~- 228 (275)
T cd06608 153 KLVDFGVSAQLDSTLGR--RNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPMR-ALF- 228 (275)
T ss_pred EECCCccceecccchhh--hcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchHH-HHH-
Confidence 99999999865433221 123458899999998753 346789999999999999999999996321110 000
Q ss_pred hccccCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 039533 856 FGRKALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVH 926 (949)
Q Consensus 856 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 926 (949)
.+..... . ........+..+.+++.+|+..||++|||+.|+++
T Consensus 229 -----------~~~~~~~-~----------------~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~ 271 (275)
T cd06608 229 -----------KIPRNPP-P----------------TLKSPENWSKKFNDFISECLIKNYEQRPFMEELLE 271 (275)
T ss_pred -----------HhhccCC-C----------------CCCchhhcCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence 0000000 0 00011134557889999999999999999999975
No 259
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=100.00 E-value=3.4e-34 Score=305.80 Aligned_cols=250 Identities=21% Similarity=0.285 Sum_probs=199.5
Q ss_pred CCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCC--CcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCccce
Q 039533 627 GFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQH--HGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFKA 704 (949)
Q Consensus 627 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 704 (949)
+|++.+.||+|+||.||++....+++.||+|++.... ....+++.+|+.++++++||||+++++++...+ ..+
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~-----~~~ 75 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEENG-----NLY 75 (256)
T ss_pred CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCC-----eEE
Confidence 5888999999999999999999889999999987432 233467899999999999999999999875443 789
Q ss_pred eEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEee
Q 039533 705 SVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVGD 784 (949)
Q Consensus 705 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~D 784 (949)
+||||+++++|.+++... ....+++.+++.++.|++.|++|||++ +++|+||+|+||+++.++.++|+|
T Consensus 76 lv~e~~~~~~l~~~~~~~--------~~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~~l~~~nil~~~~~~~~l~d 144 (256)
T cd08218 76 IVMDYCEGGDLYKKINAQ--------RGVLFPEDQILDWFVQICLALKHVHDR---KILHRDIKSQNIFLTKDGTIKLGD 144 (256)
T ss_pred EEEecCCCCcHHHHHHhc--------cCCCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCEEEee
Confidence 999999999999998621 123578899999999999999999977 899999999999999999999999
Q ss_pred cccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhccccCCCc
Q 039533 785 FGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKALPDD 864 (949)
Q Consensus 785 fG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~ 864 (949)
||.+.......... ....|+..|+|||+..+..++.++|||||||++|+|++|+.||...... ..
T Consensus 145 ~~~~~~~~~~~~~~--~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~-----~~-------- 209 (256)
T cd08218 145 FGIARVLNSTVELA--RTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGNMK-----NL-------- 209 (256)
T ss_pred ccceeecCcchhhh--hhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCCHH-----HH--------
Confidence 99998764432211 1345888999999998888999999999999999999999998532110 00
Q ss_pred hhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 039533 865 VMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVH 926 (949)
Q Consensus 865 ~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 926 (949)
...+....... .....+..+.+++.+|++.+|++||++.||++
T Consensus 210 ~~~~~~~~~~~-------------------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~vl~ 252 (256)
T cd08218 210 VLKIIRGSYPP-------------------VSSHYSYDLRNLVSQLFKRNPRDRPSVNSILE 252 (256)
T ss_pred HHHHhcCCCCC-------------------CcccCCHHHHHHHHHHhhCChhhCcCHHHHhh
Confidence 00111000000 01133456889999999999999999999986
No 260
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=100.00 E-value=4.5e-34 Score=307.78 Aligned_cols=255 Identities=21% Similarity=0.300 Sum_probs=195.6
Q ss_pred CCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCCc----------chHHHHHHHHHHHhcCCCcceeEEeeeeccc
Q 039533 627 GFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHG----------ASRSFIAECKALKSIRHRNLVKVLTACLGAD 696 (949)
Q Consensus 627 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~----------~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 696 (949)
+|.+.+.||+|+||.||+|....+++.||+|.++..... ..+.+..|+.++++++|||++++++++...+
T Consensus 2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 81 (272)
T cd06629 2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEE 81 (272)
T ss_pred ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCC
Confidence 477889999999999999999888999999998632110 1245788999999999999999999875443
Q ss_pred ccCCccceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecC
Q 039533 697 YRGNDFKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDD 776 (949)
Q Consensus 697 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~ 776 (949)
..++||||+++++|.+++.. ...+++..+..++.|++.||.|||+. +++||||+|+||+++.
T Consensus 82 -----~~~lv~e~~~~~~L~~~l~~----------~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~~~nil~~~ 143 (272)
T cd06629 82 -----YLSIFLEYVPGGSIGSCLRT----------YGRFEEQLVRFFTEQVLEGLAYLHSK---GILHRDLKADNLLVDA 143 (272)
T ss_pred -----ceEEEEecCCCCcHHHHHhh----------ccCCCHHHHHHHHHHHHHHHHHHhhC---CeeecCCChhhEEEcC
Confidence 78999999999999999862 24588889999999999999999977 8999999999999999
Q ss_pred CCceEEeecccceecCCCCCccccccccCccCccCccccCCCc--cCCccchHHHHHHHHHHHhCCCCCccccccCchhh
Q 039533 777 YMTARVGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCE--VSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLH 854 (949)
Q Consensus 777 ~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~ 854 (949)
++.++++|||.++...............|+..|+|||...... ++.++|+||||+++||+++|..||....... ...
T Consensus 144 ~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~-~~~ 222 (272)
T cd06629 144 DGICKISDFGISKKSDDIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAIA-AMF 222 (272)
T ss_pred CCeEEEeeccccccccccccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcchHH-HHH
Confidence 9999999999997654322221122345889999999987654 7899999999999999999999985321110 000
Q ss_pred hhccccCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 039533 855 NFGRKALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVH 926 (949)
Q Consensus 855 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 926 (949)
+........... .....+.+..+.+++.+|+..+|++||+++||++
T Consensus 223 ------------~~~~~~~~~~~~--------------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 268 (272)
T cd06629 223 ------------KLGNKRSAPPIP--------------PDVSMNLSPVALDFLNACFTINPDNRPTARELLQ 268 (272)
T ss_pred ------------HhhccccCCcCC--------------ccccccCCHHHHHHHHHHhcCChhhCCCHHHHhh
Confidence 000000000000 0000133567889999999999999999999875
No 261
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=100.00 E-value=1.9e-34 Score=311.47 Aligned_cols=248 Identities=23% Similarity=0.331 Sum_probs=197.6
Q ss_pred CCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCC-CcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCcccee
Q 039533 627 GFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQH-HGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFKAS 705 (949)
Q Consensus 627 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 705 (949)
.|+..+.||+|+||.||+|.+..+++.||+|+++... ....+.+.+|++++++++||||+++++++.... ..++
T Consensus 5 ~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-----~~~l 79 (277)
T cd06642 5 LFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGT-----KLWI 79 (277)
T ss_pred HHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhcccccCC-----ceEE
Confidence 3556688999999999999998889999999987443 233467889999999999999999999875443 7899
Q ss_pred EeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEeec
Q 039533 706 VYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVGDF 785 (949)
Q Consensus 706 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~Df 785 (949)
||||+++++|.+++. ...+++..+..++.|+++|+.|||++ +++|+||+|+||++++++.++++||
T Consensus 80 v~e~~~~~~L~~~~~-----------~~~~~~~~~~~~~~~i~~~l~~lH~~---~ivH~dl~p~ni~i~~~~~~~l~df 145 (277)
T cd06642 80 IMEYLGGGSALDLLK-----------PGPLEETYIATILREILKGLDYLHSE---RKIHRDIKAANVLLSEQGDVKLADF 145 (277)
T ss_pred EEEccCCCcHHHHhh-----------cCCCCHHHHHHHHHHHHHHHHHHhcC---CeeccCCChheEEEeCCCCEEEccc
Confidence 999999999999985 23478899999999999999999976 9999999999999999999999999
Q ss_pred ccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhccccCCCch
Q 039533 786 GLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKALPDDV 865 (949)
Q Consensus 786 G~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~ 865 (949)
|.+.......... ....|+..|+|||++.+..++.++|||||||++|||++|+.||.........
T Consensus 146 g~~~~~~~~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~------------- 210 (277)
T cd06642 146 GVAGQLTDTQIKR--NTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVL------------- 210 (277)
T ss_pred cccccccCcchhh--hcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhhHH-------------
Confidence 9997665432211 1245788999999999888999999999999999999999998633211100
Q ss_pred hhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHH
Q 039533 866 MDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHE 927 (949)
Q Consensus 866 ~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 927 (949)
..+.....+.. ....+..+.+++.+|++.+|++||++.||++.
T Consensus 211 -~~~~~~~~~~~------------------~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 253 (277)
T cd06642 211 -FLIPKNSPPTL------------------EGQYSKPFKEFVEACLNKDPRFRPTAKELLKH 253 (277)
T ss_pred -hhhhcCCCCCC------------------CcccCHHHHHHHHHHccCCcccCcCHHHHHHh
Confidence 00000000000 01234567899999999999999999999873
No 262
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=100.00 E-value=1.7e-34 Score=313.21 Aligned_cols=271 Identities=21% Similarity=0.283 Sum_probs=195.4
Q ss_pred CCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCC--cchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCccce
Q 039533 627 GFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHH--GASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFKA 704 (949)
Q Consensus 627 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 704 (949)
+|++.+.||+|+||.||+|++..+|+.||+|+++.... .....+.+|++++++++||||+++++++.+. ...+
T Consensus 1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~-----~~~~ 75 (284)
T cd07839 1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSD-----KKLT 75 (284)
T ss_pred CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccC-----CceE
Confidence 47888999999999999999998899999999875422 2235678899999999999999999986544 3789
Q ss_pred eEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEee
Q 039533 705 SVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVGD 784 (949)
Q Consensus 705 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~D 784 (949)
+|+||++ ++|.+++.. ....+++..++.++.||++||+|||+. +|+||||||+||+++.++.+||+|
T Consensus 76 lv~e~~~-~~l~~~~~~---------~~~~~~~~~~~~~~~qi~~al~~LH~~---~i~H~dl~~~nil~~~~~~~~l~d 142 (284)
T cd07839 76 LVFEYCD-QDLKKYFDS---------CNGDIDPEIVKSFMFQLLKGLAFCHSH---NVLHRDLKPQNLLINKNGELKLAD 142 (284)
T ss_pred EEEecCC-CCHHHHHHh---------cCCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEEcCCCcEEECc
Confidence 9999997 588887752 234589999999999999999999977 899999999999999999999999
Q ss_pred cccceecCCCCCccccccccCccCccCccccCCCc-cCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhccccCC-
Q 039533 785 FGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCE-VSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKALP- 862 (949)
Q Consensus 785 fG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~- 862 (949)
||.++......... ....++..|+|||++.+.. ++.++|||||||++|||+||+.||.........+....+..-.
T Consensus 143 fg~~~~~~~~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~ 220 (284)
T cd07839 143 FGLARAFGIPVRCY--SAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTP 220 (284)
T ss_pred cchhhccCCCCCCc--CCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHHHhCCC
Confidence 99998654332211 1234788999999887654 6899999999999999999999864322111111110000000
Q ss_pred -Cc----hhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 039533 863 -DD----VMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVH 926 (949)
Q Consensus 863 -~~----~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 926 (949)
+. ..+..+........ ...............+.+++.+|++.||++|||++|+++
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~ 280 (284)
T cd07839 221 TEESWPGVSKLPDYKPYPMYP---------ATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQ 280 (284)
T ss_pred ChHHhHHhhhcccccccCCCC---------CcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhc
Confidence 00 00000000000000 000000011123567789999999999999999999875
No 263
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=100.00 E-value=3.5e-34 Score=311.90 Aligned_cols=202 Identities=26% Similarity=0.391 Sum_probs=168.8
Q ss_pred hcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCC-cchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCccc
Q 039533 625 TSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHH-GASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFK 703 (949)
Q Consensus 625 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 703 (949)
.++|++.+.||+|++|.||+|....+++.||+|.+..... .....+.+|++++++++|+||+++++++...+ ..
T Consensus 4 ~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-----~~ 78 (291)
T cd07844 4 LETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIHTKK-----TL 78 (291)
T ss_pred ccceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEecCC-----eE
Confidence 3678999999999999999999988899999999875432 23356778999999999999999999976444 78
Q ss_pred eeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEe
Q 039533 704 ASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVG 783 (949)
Q Consensus 704 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~ 783 (949)
++||||+.+ +|.+++.. ....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+
T Consensus 79 ~lv~e~~~~-~L~~~~~~---------~~~~~~~~~~~~~~~ql~~al~~lH~~---~i~H~dl~p~nil~~~~~~~kl~ 145 (291)
T cd07844 79 TLVFEYLDT-DLKQYMDD---------CGGGLSMHNVRLFLFQLLRGLAYCHQR---RVLHRDLKPQNLLISERGELKLA 145 (291)
T ss_pred EEEEecCCC-CHHHHHHh---------CCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecccCCHHHEEEcCCCCEEEC
Confidence 999999975 99998862 223578999999999999999999977 89999999999999999999999
Q ss_pred ecccceecCCCCCccccccccCccCccCccccCC-CccCCccchHHHHHHHHHHHhCCCCCccc
Q 039533 784 DFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVG-CEVSTNGDVYSYGILLLELVIGKKPIDIM 846 (949)
Q Consensus 784 DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDiwSlGvvl~elltg~~Pf~~~ 846 (949)
|||.++......... ....++..|+|||+..+ ..++.++||||+|+++|||++|+.||...
T Consensus 146 dfg~~~~~~~~~~~~--~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~ 207 (291)
T cd07844 146 DFGLARAKSVPSKTY--SNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGS 207 (291)
T ss_pred ccccccccCCCCccc--cccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 999987543221111 12346889999998875 45789999999999999999999999643
No 264
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=8.7e-34 Score=307.95 Aligned_cols=264 Identities=22% Similarity=0.256 Sum_probs=200.8
Q ss_pred cCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCC-cchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCccce
Q 039533 626 SGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHH-GASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFKA 704 (949)
Q Consensus 626 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 704 (949)
++|...+.||.|++|.||+|.+..+++.+|+|++..... ....++.+|++++++++||||+++++++.... ....+
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~---~~~~~ 77 (287)
T cd06621 1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDES---SSSIG 77 (287)
T ss_pred CceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccC---CCeEE
Confidence 467888999999999999999988899999999875433 34567899999999999999999999875432 33679
Q ss_pred eEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEee
Q 039533 705 SVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVGD 784 (949)
Q Consensus 705 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~D 784 (949)
+||||+++++|.+++.... .....++...+..++.|++.||+|||+. +++||||+|+||++++++.++|+|
T Consensus 78 lv~e~~~~~~L~~~l~~~~------~~~~~l~~~~~~~i~~~i~~~L~~lH~~---~i~H~dl~~~nil~~~~~~~~l~d 148 (287)
T cd06621 78 IAMEYCEGGSLDSIYKKVK------KRGGRIGEKVLGKIAESVLKGLSYLHSR---KIIHRDIKPSNILLTRKGQVKLCD 148 (287)
T ss_pred EEEEecCCCCHHHHHHHHH------hcCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEecCCeEEEee
Confidence 9999999999999875211 1234578899999999999999999977 999999999999999999999999
Q ss_pred cccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhccccCCCc
Q 039533 785 FGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKALPDD 864 (949)
Q Consensus 785 fG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~ 864 (949)
||++......... ...++..|+|||.+.+..++.++||||+||++|||++|+.||+..........+.
T Consensus 149 fg~~~~~~~~~~~----~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~-------- 216 (287)
T cd06621 149 FGVSGELVNSLAG----TFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIEL-------- 216 (287)
T ss_pred ccccccccccccc----cccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHH--------
Confidence 9998765432221 2347889999999988889999999999999999999999997442110000000
Q ss_pred hhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 039533 865 VMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVH 926 (949)
Q Consensus 865 ~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 926 (949)
...+...-.....+ ........+..+.+++.+|++.+|++|||+.||++
T Consensus 217 -~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~ 265 (287)
T cd06621 217 -LSYIVNMPNPELKD------------EPGNGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLE 265 (287)
T ss_pred -HHHHhcCCchhhcc------------CCCCCCchHHHHHHHHHHHcCCCcccCCCHHHHHh
Confidence 00000000000000 00000022456889999999999999999999987
No 265
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=100.00 E-value=1.3e-34 Score=314.46 Aligned_cols=271 Identities=23% Similarity=0.303 Sum_probs=199.0
Q ss_pred cCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCC--cchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCccc
Q 039533 626 SGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHH--GASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFK 703 (949)
Q Consensus 626 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 703 (949)
++|++.+.||+|+||.||+|.+..+++.||+|++..... ...+.+.+|++++++++||||+++++++... ...
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~~~ 75 (286)
T cd07846 1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRK-----KRL 75 (286)
T ss_pred CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccC-----CeE
Confidence 468899999999999999999988899999999864332 2345788999999999999999999997543 378
Q ss_pred eeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEe
Q 039533 704 ASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVG 783 (949)
Q Consensus 704 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~ 783 (949)
++||||++++++.++.. ....+++.++..++.|++.||+|||+. +++||||+|+||++++++.++|+
T Consensus 76 ~lv~e~~~~~~l~~~~~----------~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~h~~l~p~ni~~~~~~~~~l~ 142 (286)
T cd07846 76 YLVFEFVDHTVLDDLEK----------YPNGLDESRVRKYLFQILRGIEFCHSH---NIIHRDIKPENILVSQSGVVKLC 142 (286)
T ss_pred EEEEecCCccHHHHHHh----------ccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCcEEEE
Confidence 99999999999988765 223488999999999999999999977 89999999999999999999999
Q ss_pred ecccceecCCCCCccccccccCccCccCccccCC-CccCCccchHHHHHHHHHHHhCCCCCccccccCc--hhhhhcccc
Q 039533 784 DFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVG-CEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDI--NLHNFGRKA 860 (949)
Q Consensus 784 DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~--~~~~~~~~~ 860 (949)
|||++......... .....++..|+|||+..+ ..++.++||||||+++|||++|++||......+. ...... ..
T Consensus 143 dfg~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~-~~ 219 (286)
T cd07846 143 DFGFARTLAAPGEV--YTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCL-GN 219 (286)
T ss_pred eeeeeeeccCCccc--cCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHh-CC
Confidence 99999876443321 112457899999998875 3478899999999999999999999863321100 000000 00
Q ss_pred CCCchhhhcc------cCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 039533 861 LPDDVMDIVD------SSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVH 926 (949)
Q Consensus 861 ~~~~~~~~~d------~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 926 (949)
..+...+..+ ....+... ............+..+.+++.+|++.+|++||+++|+++
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~ 282 (286)
T cd07846 220 LIPRHQEIFQKNPLFAGMRLPEVK---------EIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLH 282 (286)
T ss_pred CchhhHHHhccchHhhcccccccc---------CcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhc
Confidence 1111111100 00000000 000000011234567899999999999999999999875
No 266
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=100.00 E-value=4.5e-34 Score=304.85 Aligned_cols=252 Identities=24% Similarity=0.390 Sum_probs=197.1
Q ss_pred hcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCCcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCccce
Q 039533 625 TSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFKA 704 (949)
Q Consensus 625 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 704 (949)
..+|++.+.||+|+||.||+|.+. .++.+|+|+++... .....+.+|++++++++|||++++++++.... ..+
T Consensus 3 ~~~~~~~~~ig~g~~g~v~~~~~~-~~~~~~~k~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~-----~~~ 75 (256)
T cd05112 3 PSELTLVQEIGSGQFGLVWLGYWL-EKRKVAIKTIREGA-MSEEDFIEEAQVMMKLSHPKLVQLYGVCTERS-----PIC 75 (256)
T ss_pred hhHeEEEeeecCcccceEEEEEEe-CCCeEEEEECCCCC-CCHHHHHHHHHHHHhCCCCCeeeEEEEEccCC-----ceE
Confidence 356888999999999999999986 46789999886433 23467899999999999999999999875444 789
Q ss_pred eEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEee
Q 039533 705 SVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVGD 784 (949)
Q Consensus 705 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~D 784 (949)
+||||+++++|.+++.. ....+++..+..++.|++.|++|||+. +++||||||+||+++.++.+||+|
T Consensus 76 ~v~e~~~~~~L~~~~~~---------~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~h~dl~p~ni~i~~~~~~~l~d 143 (256)
T cd05112 76 LVFEFMEHGCLSDYLRA---------QRGKFSQETLLGMCLDVCEGMAYLESS---NVIHRDLAARNCLVGENQVVKVSD 143 (256)
T ss_pred EEEEcCCCCcHHHHHHh---------CccCCCHHHHHHHHHHHHHHHHHHHHC---CccccccccceEEEcCCCeEEECC
Confidence 99999999999999862 123578899999999999999999977 899999999999999999999999
Q ss_pred cccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHh-CCCCCccccccCchhhhhccccCCC
Q 039533 785 FGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVI-GKKPIDIMFEGDINLHNFGRKALPD 863 (949)
Q Consensus 785 fG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~ 863 (949)
||.++......... .....++..|+|||+..+..++.++||||||+++|||++ |+.||...... ......
T Consensus 144 ~g~~~~~~~~~~~~-~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~--~~~~~~------ 214 (256)
T cd05112 144 FGMTRFVLDDQYTS-STGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNS--EVVETI------ 214 (256)
T ss_pred CcceeecccCcccc-cCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCHH--HHHHHH------
Confidence 99998664332211 112235678999999988889999999999999999998 99998632211 000000
Q ss_pred chhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHH
Q 039533 864 DVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHEL 928 (949)
Q Consensus 864 ~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L 928 (949)
........ ....+..+.+++.+|++.+|++|||+.||++.|
T Consensus 215 ------~~~~~~~~------------------~~~~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~l 255 (256)
T cd05112 215 ------NAGFRLYK------------------PRLASQSVYELMQHCWKERPEDRPSFSLLLHQL 255 (256)
T ss_pred ------hCCCCCCC------------------CCCCCHHHHHHHHHHcccChhhCCCHHHHHHhh
Confidence 00000000 001235688999999999999999999999887
No 267
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=100.00 E-value=6.4e-34 Score=305.35 Aligned_cols=251 Identities=24% Similarity=0.332 Sum_probs=195.2
Q ss_pred CCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCC------cchHHHHHHHHHHHhcCCCcceeEEeeeecccccCC
Q 039533 627 GFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHH------GASRSFIAECKALKSIRHRNLVKVLTACLGADYRGN 700 (949)
Q Consensus 627 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~------~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 700 (949)
+|++.+.||+|+||.||+|... +++.+|+|.++.... ...+.+.+|++++++++|+||+++++++.+.+
T Consensus 1 ~~~~~~~ig~g~~~~v~~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~---- 75 (265)
T cd06631 1 EWTKGEVLGKGAYGTVYCGLTN-QGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDN---- 75 (265)
T ss_pred CccccceEeccCCeEEEEEEEc-CCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCC----
Confidence 5888999999999999999875 678999999864321 12256889999999999999999999976544
Q ss_pred ccceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCce
Q 039533 701 DFKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTA 780 (949)
Q Consensus 701 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~ 780 (949)
..++||||+++++|.+++.. ...+++..+..++.|++.|++|||+. +|+|+||+|+||+++.++.+
T Consensus 76 -~~~lv~e~~~~~~L~~~l~~----------~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~ 141 (265)
T cd06631 76 -TISIFMEFVPGGSISSILNR----------FGPLPEPVFCKYTKQILDGVAYLHNN---CVVHRDIKGNNVMLMPNGII 141 (265)
T ss_pred -eEEEEEecCCCCcHHHHHHh----------cCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcCHHhEEECCCCeE
Confidence 78999999999999999962 23578889999999999999999977 89999999999999999999
Q ss_pred EEeecccceecCCCCC----ccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhh
Q 039533 781 RVGDFGLARILSPDHT----QTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNF 856 (949)
Q Consensus 781 kl~DfG~a~~~~~~~~----~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~ 856 (949)
+|+|||.+........ ........|+..|+|||+..+..++.++|||||||++|||++|+.||........ ....
T Consensus 142 ~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~-~~~~ 220 (265)
T cd06631 142 KLIDFGCARRLAWVGLHGTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRLAA-MFYI 220 (265)
T ss_pred EeccchhhHhhhhccccccccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCChHHH-HHHh
Confidence 9999999876532111 1111234588999999999988899999999999999999999999963311100 0000
Q ss_pred ccccCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 039533 857 GRKALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVH 926 (949)
Q Consensus 857 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 926 (949)
.. ... ..+.. ....+..+.+++.+|++.+|++||++.|+++
T Consensus 221 ~~---~~~----~~~~~----------------------~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~ 261 (265)
T cd06631 221 GA---HRG----LMPRL----------------------PDSFSAAAIDFVTSCLTRDQHERPSALQLLR 261 (265)
T ss_pred hh---ccC----CCCCC----------------------CCCCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 00 000 00000 0123456789999999999999999999875
No 268
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=7.6e-35 Score=315.85 Aligned_cols=250 Identities=25% Similarity=0.364 Sum_probs=204.7
Q ss_pred CCCeeeeecCceEEEEEEcCC---CEEEEEEEEecCCCc-chHHHHHHHHHHHhcCCCcceeEEeeeecccccCCcccee
Q 039533 630 SANLVGVGSFGSVYKGIIDEG---RTTIAVKVFNLQHHG-ASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFKAS 705 (949)
Q Consensus 630 ~~~~lg~G~~g~Vy~~~~~~~---~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 705 (949)
..+.||+|.||.|++|.|... ...||||.++..... ...+|.+|+.+|.+++|+|++++||...+. ...+
T Consensus 114 l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl~q------p~mM 187 (1039)
T KOG0199|consen 114 LYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVLDQ------PAMM 187 (1039)
T ss_pred HHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeeccc------hhhH
Confidence 457899999999999999642 246999999866544 568999999999999999999999997642 5789
Q ss_pred EeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEeec
Q 039533 706 VYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVGDF 785 (949)
Q Consensus 706 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~Df 785 (949)
|||.++.|+|.+.|+. .....+-......++.|||.|+.||.++ +.|||||..+|+++-....+||+||
T Consensus 188 V~ELaplGSLldrLrk--------a~~~~llv~~Lcdya~QiA~aM~YLesk---rlvHRDLAARNlllasprtVKI~DF 256 (1039)
T KOG0199|consen 188 VFELAPLGSLLDRLRK--------AKKAILLVSRLCDYAMQIAKAMQYLESK---RLVHRDLAARNLLLASPRTVKICDF 256 (1039)
T ss_pred HhhhcccchHHHHHhh--------ccccceeHHHHHHHHHHHHHHHHHHhhh---hhhhhhhhhhhheecccceeeeecc
Confidence 9999999999999973 1345677888899999999999999988 8999999999999998899999999
Q ss_pred ccceecCCCCCcc-ccccccCccCccCccccCCCccCCccchHHHHHHHHHHHh-CCCCCccccccCchhhhhccccCCC
Q 039533 786 GLARILSPDHTQT-SSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVI-GKKPIDIMFEGDINLHNFGRKALPD 863 (949)
Q Consensus 786 G~a~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~ 863 (949)
|+.+.++...... ......-.+.|+|||.+...+++.++|||+|||++|||+| |+.||......
T Consensus 257 GLmRaLg~ned~Yvm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g~-------------- 322 (1039)
T KOG0199|consen 257 GLMRALGENEDMYVMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRGI-------------- 322 (1039)
T ss_pred cceeccCCCCcceEecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCCHH--------------
Confidence 9999887665532 2223445678999999999999999999999999999999 88887422110
Q ss_pred chhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHH
Q 039533 864 DVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHEL 928 (949)
Q Consensus 864 ~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L 928 (949)
.+.+.+| ..++.+....|++.+++++..||..+|++|||+..+.+.+
T Consensus 323 qIL~~iD------------------~~erLpRPk~csedIY~imk~cWah~paDRptFsair~~~ 369 (1039)
T KOG0199|consen 323 QILKNID------------------AGERLPRPKYCSEDIYQIMKNCWAHNPADRPTFSAIREDL 369 (1039)
T ss_pred HHHHhcc------------------ccccCCCCCCChHHHHHHHHHhccCCccccccHHHHHHhH
Confidence 1112222 2234445568899999999999999999999999997544
No 269
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=4.2e-34 Score=310.45 Aligned_cols=254 Identities=22% Similarity=0.291 Sum_probs=197.3
Q ss_pred cCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCC-CcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCccce
Q 039533 626 SGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQH-HGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFKA 704 (949)
Q Consensus 626 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 704 (949)
++|++.+.||+|+||.||+|.+..+++.||+|.++... ......+.+|+.++++++||||+++++++...+ ..+
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~-----~~~ 75 (286)
T cd06622 1 DEIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFFIEG-----AVY 75 (286)
T ss_pred ChhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCC-----eEE
Confidence 46889999999999999999998889999999987542 223467889999999999999999999876544 789
Q ss_pred eEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEee
Q 039533 705 SVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVGD 784 (949)
Q Consensus 705 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~D 784 (949)
+||||+++++|.+++.... ....+++..+..++.|++.|+.|||+.+ +|+||||||+||+++.++.+||+|
T Consensus 76 lv~e~~~~~~l~~~~~~~~-------~~~~~~~~~~~~~~~~i~~~l~~LH~~~--~i~H~dl~p~nil~~~~~~~~l~d 146 (286)
T cd06622 76 MCMEYMDAGSLDKLYAGGV-------ATEGIPEDVLRRITYAVVKGLKFLKEEH--NIIHRDVKPTNVLVNGNGQVKLCD 146 (286)
T ss_pred EEEeecCCCCHHHHHHhcc-------ccCCCCHHHHHHHHHHHHHHHHHHHhcC--CEeeCCCCHHHEEECCCCCEEEee
Confidence 9999999999999986210 1246899999999999999999999643 899999999999999999999999
Q ss_pred cccceecCCCCCccccccccCccCccCccccCCC------ccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhcc
Q 039533 785 FGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGC------EVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGR 858 (949)
Q Consensus 785 fG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~------~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~ 858 (949)
||.+......... ...++..|+|||++.+. .++.++|||||||++|||++|+.||....... ....
T Consensus 147 fg~~~~~~~~~~~----~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~--~~~~-- 218 (286)
T cd06622 147 FGVSGNLVASLAK----TNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYAN--IFAQ-- 218 (286)
T ss_pred cCCcccccCCccc----cCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhh--HHHH--
Confidence 9998765432221 23478899999997654 35889999999999999999999996321110 0000
Q ss_pred ccCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 039533 859 KALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVH 926 (949)
Q Consensus 859 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 926 (949)
...+.+..... ...+.+..+.+++.+|++.+|++||+++|++.
T Consensus 219 ------~~~~~~~~~~~-------------------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~ 261 (286)
T cd06622 219 ------LSAIVDGDPPT-------------------LPSGYSDDAQDFVAKCLNKIPNRRPTYAQLLE 261 (286)
T ss_pred ------HHHHhhcCCCC-------------------CCcccCHHHHHHHHHHcccCcccCCCHHHHhc
Confidence 00011100000 01134566789999999999999999999987
No 270
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=100.00 E-value=4.3e-34 Score=316.31 Aligned_cols=201 Identities=20% Similarity=0.215 Sum_probs=164.5
Q ss_pred CCCeeeee--cCceEEEEEEcCCCEEEEEEEEecCCC--cchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCcccee
Q 039533 630 SANLVGVG--SFGSVYKGIIDEGRTTIAVKVFNLQHH--GASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFKAS 705 (949)
Q Consensus 630 ~~~~lg~G--~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 705 (949)
+.++||+| +|++||++....+++.||+|+++.... ...+.+.+|+++++.++||||+++++++...+ ..++
T Consensus 2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~-----~~~l 76 (327)
T cd08227 2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIADN-----ELWV 76 (327)
T ss_pred hhhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECC-----EEEE
Confidence 45789999 678999999999999999999875432 23456778999999999999999999986554 7899
Q ss_pred EeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEeec
Q 039533 706 VYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVGDF 785 (949)
Q Consensus 706 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~Df 785 (949)
||||+++|+|.+++... ....+++..+..++.|++.||+|||++ +|+||||||+||+++.++.++++||
T Consensus 77 v~e~~~~~~l~~~~~~~--------~~~~l~~~~~~~i~~qi~~~L~~LH~~---~iiH~dlkp~Nil~~~~~~~~l~~~ 145 (327)
T cd08227 77 VTSFMAYGSAKDLICTH--------FMDGMSELAIAYILQGVLKALDYIHHM---GYVHRSVKASHILISVDGKVYLSGL 145 (327)
T ss_pred EEeccCCCcHHHHHHhh--------ccCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCChhhEEEecCCcEEEccc
Confidence 99999999999998621 123488999999999999999999977 8999999999999999999999999
Q ss_pred ccceecCCCCC-c----cccccccCccCccCccccCC--CccCCccchHHHHHHHHHHHhCCCCCccc
Q 039533 786 GLARILSPDHT-Q----TSSFSVKGSLGYIAPEYGVG--CEVSTNGDVYSYGILLLELVIGKKPIDIM 846 (949)
Q Consensus 786 G~a~~~~~~~~-~----~~~~~~~gt~~y~aPE~~~~--~~~~~~sDiwSlGvvl~elltg~~Pf~~~ 846 (949)
+.+........ . .......++..|+|||++.+ ..++.++|||||||++|||++|+.||...
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~ 213 (327)
T cd08227 146 RSNLSMINHGQRLRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDM 213 (327)
T ss_pred chhhccccccccccccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCc
Confidence 86544321111 0 00112346788999999876 45889999999999999999999999643
No 271
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=100.00 E-value=2.1e-34 Score=318.94 Aligned_cols=202 Identities=23% Similarity=0.300 Sum_probs=172.0
Q ss_pred cCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecC---CCcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCcc
Q 039533 626 SGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQ---HHGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDF 702 (949)
Q Consensus 626 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 702 (949)
++|.+.+.||+|+||.||+|++..+++.||+|++... .......+.+|..++..++|++|+++++++...+ .
T Consensus 1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~-----~ 75 (331)
T cd05624 1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDEN-----Y 75 (331)
T ss_pred CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCC-----E
Confidence 4789999999999999999999988999999998642 1223356788999999999999999999876444 7
Q ss_pred ceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEE
Q 039533 703 KASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARV 782 (949)
Q Consensus 703 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl 782 (949)
.++||||+++|+|.+++.. ....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||
T Consensus 76 ~~lv~Ey~~gg~L~~~l~~---------~~~~l~~~~~~~~~~qi~~~L~~lH~~---~iiHrDlkp~Nill~~~~~~kl 143 (331)
T cd05624 76 LYLVMDYYVGGDLLTLLSK---------FEDRLPEDMARFYIAEMVLAIHSIHQL---HYVHRDIKPDNVLLDMNGHIRL 143 (331)
T ss_pred EEEEEeCCCCCcHHHHHHH---------hcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCchHHEEEcCCCCEEE
Confidence 8999999999999999962 124578889999999999999999977 9999999999999999999999
Q ss_pred eecccceecCCCCCccccccccCccCccCccccCC-----CccCCccchHHHHHHHHHHHhCCCCCcc
Q 039533 783 GDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVG-----CEVSTNGDVYSYGILLLELVIGKKPIDI 845 (949)
Q Consensus 783 ~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~sDiwSlGvvl~elltg~~Pf~~ 845 (949)
+|||+++.......... ....||+.|+|||++.+ ..++.++|||||||++|||++|+.||..
T Consensus 144 ~DfG~a~~~~~~~~~~~-~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~ 210 (331)
T cd05624 144 ADFGSCLKMNQDGTVQS-SVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYA 210 (331)
T ss_pred EeccceeeccCCCceee-ccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccC
Confidence 99999987654433221 13459999999998875 4678999999999999999999999953
No 272
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=100.00 E-value=6.9e-34 Score=304.07 Aligned_cols=254 Identities=24% Similarity=0.387 Sum_probs=199.1
Q ss_pred hcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCCcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCccce
Q 039533 625 TSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFKA 704 (949)
Q Consensus 625 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 704 (949)
.++|++.+.||+|+||.||+|.+. ++..+|+|.+.... ...+.+.+|++++++++|+||+++++++.. ...+
T Consensus 5 ~~~~~~~~~lg~g~~~~vy~~~~~-~~~~~~iK~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~------~~~~ 76 (260)
T cd05073 5 RESLKLEKKLGAGQFGEVWMATYN-KHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVTK------EPIY 76 (260)
T ss_pred ccceeEEeEecCccceEEEEEEec-CCccEEEEecCCCh-hHHHHHHHHHHHHHhcCCCCcceEEEEEcC------CCeE
Confidence 357899999999999999999876 55679999886432 234678899999999999999999988654 2679
Q ss_pred eEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEee
Q 039533 705 SVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVGD 784 (949)
Q Consensus 705 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~D 784 (949)
++|||+++++|.+++... ....+++.+++.++.|++.||+|||+. +++||||||+||+++.++.+||+|
T Consensus 77 ~v~e~~~~~~L~~~~~~~--------~~~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~ni~i~~~~~~~l~d 145 (260)
T cd05073 77 IITEFMAKGSLLDFLKSD--------EGSKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIAD 145 (260)
T ss_pred EEEEeCCCCcHHHHHHhC--------CccccCHHHHHHHHHHHHHHHHHHHhC---CccccccCcceEEEcCCCcEEECC
Confidence 999999999999999631 234578889999999999999999977 899999999999999999999999
Q ss_pred cccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHh-CCCCCccccccCchhhhhccccCCC
Q 039533 785 FGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVI-GKKPIDIMFEGDINLHNFGRKALPD 863 (949)
Q Consensus 785 fG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~ 863 (949)
||.+.......... .....++..|+|||++.+..++.++|||||||++|++++ |+.||...... .....
T Consensus 146 ~~~~~~~~~~~~~~-~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~--~~~~~------- 215 (260)
T cd05073 146 FGLARVIEDNEYTA-REGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNP--EVIRA------- 215 (260)
T ss_pred CcceeeccCCCccc-ccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCHH--HHHHH-------
Confidence 99998664332211 112335678999999988889999999999999999999 99998632111 01000
Q ss_pred chhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHH
Q 039533 864 DVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHELQS 930 (949)
Q Consensus 864 ~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~ 930 (949)
+...... +.....+..+.+++.+|++.+|++||++.++.+.|+.
T Consensus 216 -----~~~~~~~------------------~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~L~~ 259 (260)
T cd05073 216 -----LERGYRM------------------PRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDD 259 (260)
T ss_pred -----HhCCCCC------------------CCcccCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 0000000 0001234568899999999999999999999999875
No 273
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=100.00 E-value=8.2e-34 Score=304.50 Aligned_cols=253 Identities=21% Similarity=0.251 Sum_probs=194.5
Q ss_pred cCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCC-----cchHHHHHHHHHHHhcCCCcceeEEeeeecccccCC
Q 039533 626 SGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHH-----GASRSFIAECKALKSIRHRNLVKVLTACLGADYRGN 700 (949)
Q Consensus 626 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-----~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 700 (949)
.+|++.+.||+|+||.||+|.+..+++.||+|++..... ...+.+.+|+.++++++||||+++++++.+.. .
T Consensus 2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~---~ 78 (265)
T cd06652 2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPM---E 78 (265)
T ss_pred CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCC---C
Confidence 578999999999999999999998899999999864321 22357888999999999999999999865432 2
Q ss_pred ccceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCce
Q 039533 701 DFKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTA 780 (949)
Q Consensus 701 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~ 780 (949)
...++||||+++++|.+++.. ...+++..+..++.|++.||+|||++ +++||||||+||+++.++.+
T Consensus 79 ~~~~~v~e~~~~~~L~~~l~~----------~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~ 145 (265)
T cd06652 79 RTLSIFMEHMPGGSIKDQLKS----------YGALTENVTRKYTRQILEGVSYLHSN---MIVHRDIKGANILRDSVGNV 145 (265)
T ss_pred ceEEEEEEecCCCcHHHHHHH----------cCCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEecCCCCE
Confidence 357899999999999999862 23478888999999999999999977 89999999999999999999
Q ss_pred EEeecccceecCCCCC-ccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhccc
Q 039533 781 RVGDFGLARILSPDHT-QTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRK 859 (949)
Q Consensus 781 kl~DfG~a~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~ 859 (949)
+|+|||.++....... ........|+..|+|||++.+..++.++|||||||++|||++|+.||....... ..
T Consensus 146 ~l~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~-~~------ 218 (265)
T cd06652 146 KLGDFGASKRLQTICLSGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEAMA-AI------ 218 (265)
T ss_pred EECcCccccccccccccccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccchHH-HH------
Confidence 9999999986543211 111123458899999999988889999999999999999999999985321110 00
Q ss_pred cCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 039533 860 ALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVH 926 (949)
Q Consensus 860 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 926 (949)
.+.......+ .........+.+++.+|+. +|++||+++||++
T Consensus 219 ------~~~~~~~~~~------------------~~~~~~~~~~~~~i~~~l~-~p~~Rp~~~~il~ 260 (265)
T cd06652 219 ------FKIATQPTNP------------------VLPPHVSDHCRDFLKRIFV-EAKLRPSADELLR 260 (265)
T ss_pred ------HHHhcCCCCC------------------CCchhhCHHHHHHHHHHhc-ChhhCCCHHHHhc
Confidence 0000000000 0011334456778888884 9999999999875
No 274
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=100.00 E-value=4.5e-34 Score=304.40 Aligned_cols=247 Identities=27% Similarity=0.422 Sum_probs=195.3
Q ss_pred cCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCCcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCcccee
Q 039533 626 SGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFKAS 705 (949)
Q Consensus 626 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 705 (949)
++|++.+.||+|+||.||+|.. .++.||+|+++... ....+.+|+.++++++|||++++++++... ..++
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~--~~~~~~iK~~~~~~--~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~------~~~~ 75 (254)
T cd05083 6 QKLTLGEIIGEGEFGAVLQGEY--TGQKVAVKNIKCDV--TAQAFLEETAVMTKLHHKNLVRLLGVILHN------GLYI 75 (254)
T ss_pred HHceeeeeeccCCCCceEeccc--CCCceEEEeecCcc--hHHHHHHHHHHHHhCCCCCcCeEEEEEcCC------CcEE
Confidence 4688999999999999999975 47789999986432 346788999999999999999999987532 3689
Q ss_pred EeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEeec
Q 039533 706 VYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVGDF 785 (949)
Q Consensus 706 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~Df 785 (949)
||||+++++|.+++... ....+++..+..++.|++.|++|||+. +++||||||+||+++.++.+||+||
T Consensus 76 v~e~~~~~~L~~~l~~~--------~~~~~~~~~~~~~~~qi~~al~~lH~~---~~~H~dl~p~nili~~~~~~kl~Df 144 (254)
T cd05083 76 VMELMSKGNLVNFLRTR--------GRALVSVIQLLQFSLDVAEGMEYLESK---KLVHRDLAARNILVSEDGVAKVSDF 144 (254)
T ss_pred EEECCCCCCHHHHHHhc--------CcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccCcceEEEcCCCcEEECCC
Confidence 99999999999999631 223578999999999999999999976 9999999999999999999999999
Q ss_pred ccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHh-CCCCCccccccCchhhhhccccCCCc
Q 039533 786 GLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVI-GKKPIDIMFEGDINLHNFGRKALPDD 864 (949)
Q Consensus 786 G~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~ 864 (949)
|.+........ ....+..|+|||++.+..++.++|||||||++|||++ |+.||.......
T Consensus 145 g~~~~~~~~~~-----~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~-------------- 205 (254)
T cd05083 145 GLARVGSMGVD-----NSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLKE-------------- 205 (254)
T ss_pred ccceeccccCC-----CCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCHHH--------------
Confidence 99976433211 1234678999999988889999999999999999998 999985332110
Q ss_pred hhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHH
Q 039533 865 VMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHELQS 930 (949)
Q Consensus 865 ~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~ 930 (949)
..+.+.......+ ....+..+.+++.+|++.+|++||+++++++.|++
T Consensus 206 ~~~~~~~~~~~~~------------------~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 253 (254)
T cd05083 206 VKECVEKGYRMEP------------------PEGCPADVYVLMTSCWETEPKKRPSFHKLREKLEK 253 (254)
T ss_pred HHHHHhCCCCCCC------------------CCcCCHHHHHHHHHHcCCChhhCcCHHHHHHHHcc
Confidence 0011111100000 01334567899999999999999999999998863
No 275
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=100.00 E-value=1.1e-33 Score=303.95 Aligned_cols=256 Identities=21% Similarity=0.304 Sum_probs=183.8
Q ss_pred CeeeeecCceEEEEEEcCC--CEEEEEEEEecCC-CcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCccceeEee
Q 039533 632 NLVGVGSFGSVYKGIIDEG--RTTIAVKVFNLQH-HGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFKASVYE 708 (949)
Q Consensus 632 ~~lg~G~~g~Vy~~~~~~~--~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e 708 (949)
+.||+|+||.||+|+...+ ...+++|.++... ....+.+.+|+.+++.++||||+++++++.... ..++|||
T Consensus 1 ~~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~-----~~~lv~e 75 (268)
T cd05086 1 QEIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAI-----PYLLVFE 75 (268)
T ss_pred CcCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEecCCC-----ccEEEEe
Confidence 3689999999999976433 2356677765433 234568999999999999999999999976544 7899999
Q ss_pred eccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEeecccc
Q 039533 709 FMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVGDFGLA 788 (949)
Q Consensus 709 ~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~DfG~a 788 (949)
|+++|+|.++++.... .....++..+..++.|+++||+|||+. +++||||||+||+++.++.+||+|||.+
T Consensus 76 ~~~~~~L~~~l~~~~~------~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dikp~nil~~~~~~~~l~Dfg~~ 146 (268)
T cd05086 76 YCELGDLKSYLSQEQW------HRRNSQLLLLQRMACEIAAGVTHMHKH---NFLHSDLALRNCFLTSDLTVKVGDYGIG 146 (268)
T ss_pred cCCCCcHHHHHHhhhc------ccccccHHHHHHHHHHHHHHHHHHHHC---CeeccCCccceEEEcCCccEEecccccc
Confidence 9999999999973211 123466778889999999999999977 8999999999999999999999999998
Q ss_pred eecCCCCCccccccccCccCccCccccCC-------CccCCccchHHHHHHHHHHHh-CCCCCccccccCchhhhhcccc
Q 039533 789 RILSPDHTQTSSFSVKGSLGYIAPEYGVG-------CEVSTNGDVYSYGILLLELVI-GKKPIDIMFEGDINLHNFGRKA 860 (949)
Q Consensus 789 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-------~~~~~~sDiwSlGvvl~ellt-g~~Pf~~~~~~~~~~~~~~~~~ 860 (949)
................++..|+|||++.. ..++.++|||||||++|||++ |..||....... .....
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~-----~~~~~ 221 (268)
T cd05086 147 PSRYKEDYIETEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSDRE-----VLNHV 221 (268)
T ss_pred cccCcchhhhcccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCHHH-----HHHHH
Confidence 64322211111123457889999998753 245789999999999999997 567875321110 00010
Q ss_pred CCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHH
Q 039533 861 LPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHELQ 929 (949)
Q Consensus 861 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~ 929 (949)
..+......++.+.. .....+.+++..|| .+|++||+++||++.|.
T Consensus 222 ~~~~~~~~~~~~~~~----------------------~~~~~~~~l~~~c~-~~P~~Rp~~~~i~~~l~ 267 (268)
T cd05086 222 IKDQQVKLFKPQLEL----------------------PYSERWYEVLQFCW-LSPEKRATAEEVHRLLT 267 (268)
T ss_pred HhhcccccCCCccCC----------------------CCcHHHHHHHHHHh-hCcccCCCHHHHHHHhc
Confidence 111111111211111 12235677888899 67999999999998873
No 276
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=100.00 E-value=5.4e-34 Score=307.76 Aligned_cols=263 Identities=23% Similarity=0.366 Sum_probs=201.1
Q ss_pred cCCCCCCeeeeecCceEEEEEEcC-----CCEEEEEEEEecCCCc-chHHHHHHHHHHHhcCCCcceeEEeeeecccccC
Q 039533 626 SGFSSANLVGVGSFGSVYKGIIDE-----GRTTIAVKVFNLQHHG-ASRSFIAECKALKSIRHRNLVKVLTACLGADYRG 699 (949)
Q Consensus 626 ~~y~~~~~lg~G~~g~Vy~~~~~~-----~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 699 (949)
++|++.+.||+|+||.||+|+... +.+.|++|.+...... ..+.+.+|++++++++|+||+++++++.+.+
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--- 81 (275)
T cd05046 5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCREAE--- 81 (275)
T ss_pred HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEECCCC---
Confidence 578899999999999999999753 3467999998654433 3467999999999999999999999975544
Q ss_pred CccceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCc
Q 039533 700 NDFKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMT 779 (949)
Q Consensus 700 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~ 779 (949)
..++||||+++|+|.+++........ ......+++..+..++.|++.||+|||+. +|+||||||+||+++.++.
T Consensus 82 --~~~lv~e~~~~~~L~~~i~~~~~~~~-~~~~~~l~~~~~~~~~~~l~~~l~~LH~~---~i~H~dlkp~Nili~~~~~ 155 (275)
T cd05046 82 --PHYMILEYTDLGDLKQFLRATKSKDE-KLKPPPLSTKQKVALCTQIALGMDHLSNA---RFVHRDLAARNCLVSSQRE 155 (275)
T ss_pred --cceEEEEecCCCcHHHHHHhcccccc-cccccCCCHHHHHHHHHHHHHHHHHhhhc---CcccCcCccceEEEeCCCc
Confidence 78999999999999999974321111 11223689999999999999999999977 8999999999999999999
Q ss_pred eEEeecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHh-CCCCCccccccCchhhhhcc
Q 039533 780 ARVGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVI-GKKPIDIMFEGDINLHNFGR 858 (949)
Q Consensus 780 ~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~ellt-g~~Pf~~~~~~~~~~~~~~~ 858 (949)
++++|||++......... ......++..|+|||.+.+..++.++||||||+++|+|++ |..||....... ......
T Consensus 156 ~~l~~~~~~~~~~~~~~~-~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~~--~~~~~~ 232 (275)
T cd05046 156 VKVSLLSLSKDVYNSEYY-KLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDEE--VLNRLQ 232 (275)
T ss_pred EEEcccccccccCccccc-ccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccchHH--HHHHHH
Confidence 999999998754322211 1112346778999999988888999999999999999999 888885322111 110000
Q ss_pred ccCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHH
Q 039533 859 KALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHELQ 929 (949)
Q Consensus 859 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~ 929 (949)
..... +......+..+.+++.+|++.+|++||++.|+++.|+
T Consensus 233 -----------~~~~~------------------~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~l~ 274 (275)
T cd05046 233 -----------AGKLE------------------LPVPEGCPSRLYKLMTRCWAVNPKDRPSFSELVSALG 274 (275)
T ss_pred -----------cCCcC------------------CCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhc
Confidence 00000 0000123457889999999999999999999999875
No 277
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=100.00 E-value=7.3e-34 Score=308.13 Aligned_cols=254 Identities=22% Similarity=0.252 Sum_probs=192.7
Q ss_pred cCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCC-cchHHHHHHHHH-HHhcCCCcceeEEeeeecccccCCccc
Q 039533 626 SGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHH-GASRSFIAECKA-LKSIRHRNLVKVLTACLGADYRGNDFK 703 (949)
Q Consensus 626 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~-l~~l~h~niv~~~~~~~~~~~~~~~~~ 703 (949)
++|++.+.||+|+||.||+|++..+++.||+|+++.... ....++..|+.. ++..+||||+++++++.... ..
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~-----~~ 75 (283)
T cd06617 1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFREG-----DV 75 (283)
T ss_pred CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCC-----cE
Confidence 478899999999999999999998899999999875432 233456666665 55668999999999976544 78
Q ss_pred eeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEe
Q 039533 704 ASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVG 783 (949)
Q Consensus 704 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~ 783 (949)
++||||++ |+|.+++.... .....+++..+..++.|++.|++|||+++ +++||||||+||+++.++.+||+
T Consensus 76 ~lv~e~~~-~~l~~~l~~~~------~~~~~~~~~~~~~~~~qi~~~l~~lH~~~--~i~h~dlkp~nil~~~~~~~kl~ 146 (283)
T cd06617 76 WICMEVMD-TSLDKFYKKVY------DKGLTIPEDILGKIAVSIVKALEYLHSKL--SVIHRDVKPSNVLINRNGQVKLC 146 (283)
T ss_pred EEEhhhhc-ccHHHHHHHhc------cCCCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEe
Confidence 99999997 68888875321 12346899999999999999999999643 89999999999999999999999
Q ss_pred ecccceecCCCCCccccccccCccCccCccccCC----CccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhccc
Q 039533 784 DFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVG----CEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRK 859 (949)
Q Consensus 784 DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~----~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~ 859 (949)
|||.+......... ....|+..|+|||++.+ ..++.++|+|||||++|||++|+.||..........
T Consensus 147 dfg~~~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~------ 217 (283)
T cd06617 147 DFGISGYLVDSVAK---TIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTPFQQL------ 217 (283)
T ss_pred eccccccccccccc---ccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccCHHHH------
Confidence 99999865432221 12358889999998765 456889999999999999999999986321110000
Q ss_pred cCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 039533 860 ALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVH 926 (949)
Q Consensus 860 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 926 (949)
...........+. ...+..+.+++.+|+..+|++||++.|+++
T Consensus 218 ------~~~~~~~~~~~~~------------------~~~~~~l~~li~~~l~~~p~~Rp~~~~il~ 260 (283)
T cd06617 218 ------KQVVEEPSPQLPA------------------EKFSPEFQDFVNKCLKKNYKERPNYPELLQ 260 (283)
T ss_pred ------HHHHhcCCCCCCc------------------cccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 0111000000000 123456889999999999999999999986
No 278
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=100.00 E-value=9e-34 Score=303.09 Aligned_cols=239 Identities=24% Similarity=0.452 Sum_probs=187.9
Q ss_pred CeeeeecCceEEEEEEcCCC----------EEEEEEEEecCCCcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCc
Q 039533 632 NLVGVGSFGSVYKGIIDEGR----------TTIAVKVFNLQHHGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGND 701 (949)
Q Consensus 632 ~~lg~G~~g~Vy~~~~~~~~----------~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 701 (949)
+.||+|+||.||+|.+..++ ..|++|++...... ...+.+|+.++++++||||+++++++.. .
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~-~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~----- 73 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRD-SLAFFETASLMSQLSHKHLVKLYGVCVR-D----- 73 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhh-HHHHHHHHHHHHcCCCcchhheeeEEec-C-----
Confidence 46899999999999997655 35888887644433 5788999999999999999999999765 3
Q ss_pred cceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCC---
Q 039533 702 FKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYM--- 778 (949)
Q Consensus 702 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~--- 778 (949)
..++||||+++|+|.+++.. ....+++..+..++.|++.||+|||++ +|+||||||+||+++.++
T Consensus 74 ~~~lv~e~~~~~~L~~~l~~---------~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dlkp~Nill~~~~~~~ 141 (259)
T cd05037 74 ENIMVEEYVKFGPLDVFLHR---------EKNNVSLHWKLDVAKQLASALHYLEDK---KLVHGNVCGKNILVARYGLNE 141 (259)
T ss_pred CcEEEEEcCCCCcHHHHHHh---------hccCCCHHHHHHHHHHHHHHHHHHhhC---CeecccCccceEEEecCcccc
Confidence 57999999999999999972 122588999999999999999999977 999999999999999887
Q ss_pred ----ceEEeecccceecCCCCCccccccccCccCccCccccCCC--ccCCccchHHHHHHHHHHHh-CCCCCccccccCc
Q 039533 779 ----TARVGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGC--EVSTNGDVYSYGILLLELVI-GKKPIDIMFEGDI 851 (949)
Q Consensus 779 ----~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~sDiwSlGvvl~ellt-g~~Pf~~~~~~~~ 851 (949)
.+||+|||++....... ...++..|+|||++.+. .++.++|||||||++|||++ |..||.......
T Consensus 142 ~~~~~~kl~Dfg~a~~~~~~~------~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~~- 214 (259)
T cd05037 142 GYVPFIKLSDPGIPITVLSRE------ERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSSE- 214 (259)
T ss_pred CCceeEEeCCCCccccccccc------ccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCchh-
Confidence 79999999998654311 23467889999998876 78999999999999999999 577775332110
Q ss_pred hhhhhccccCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHH
Q 039533 852 NLHNFGRKALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHELQ 929 (949)
Q Consensus 852 ~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~ 929 (949)
...+. ......+.+ ....+.+++.+|+..+|++|||+.||++.|+
T Consensus 215 -~~~~~-----------~~~~~~~~~---------------------~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~ 259 (259)
T cd05037 215 -KERFY-----------QDQHRLPMP---------------------DCAELANLINQCWTYDPTKRPSFRAILRDLN 259 (259)
T ss_pred -HHHHH-----------hcCCCCCCC---------------------CchHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence 00000 000000000 0146789999999999999999999998873
No 279
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=100.00 E-value=7.9e-34 Score=308.97 Aligned_cols=252 Identities=21% Similarity=0.303 Sum_probs=201.7
Q ss_pred hcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCCcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCccce
Q 039533 625 TSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFKA 704 (949)
Q Consensus 625 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 704 (949)
.++|.+.+.||+|+||.||+|....++..||+|.+........+.+.+|+.++++++||||+++++++...+ ..+
T Consensus 18 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~-----~~~ 92 (293)
T cd06647 18 KKKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYLVGD-----ELW 92 (293)
T ss_pred hhhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcCCCCeeehhheeeeCC-----cEE
Confidence 367899999999999999999988788999999987555555577899999999999999999999876544 789
Q ss_pred eEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEee
Q 039533 705 SVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVGD 784 (949)
Q Consensus 705 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~D 784 (949)
+|+||+++++|.+++.. ..+++.++..++.|++.|++|||+. +++||||||+||+++.++.+||+|
T Consensus 93 lv~e~~~~~~L~~~~~~-----------~~l~~~~~~~i~~~l~~al~~LH~~---gi~H~dL~p~Nili~~~~~~kL~d 158 (293)
T cd06647 93 VVMEYLAGGSLTDVVTE-----------TCMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTD 158 (293)
T ss_pred EEEecCCCCcHHHHHhh-----------cCCCHHHHHHHHHHHHHHHHHHHhC---CEeeccCCHHHEEEcCCCCEEEcc
Confidence 99999999999999862 3478889999999999999999977 999999999999999999999999
Q ss_pred cccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhccccCCCc
Q 039533 785 FGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKALPDD 864 (949)
Q Consensus 785 fG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~ 864 (949)
||.+.......... ....|+..|+|||...+..++.++|||||||++||+++|+.||.......... ....
T Consensus 159 fg~~~~~~~~~~~~--~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~~-~~~~------ 229 (293)
T cd06647 159 FGFCAQITPEQSKR--STMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALY-LIAT------ 229 (293)
T ss_pred Ccceeccccccccc--ccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhhee-ehhc------
Confidence 99987655433221 13458889999999988889999999999999999999999996432111000 0000
Q ss_pred hhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHH
Q 039533 865 VMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHE 927 (949)
Q Consensus 865 ~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 927 (949)
... + .+......+..+.+++.+||+.+|++||++.|++..
T Consensus 230 -----~~~--~----------------~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~h 269 (293)
T cd06647 230 -----NGT--P----------------ELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQH 269 (293)
T ss_pred -----CCC--C----------------CCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 000 0 000011234567889999999999999999999865
No 280
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=100.00 E-value=3.5e-34 Score=317.47 Aligned_cols=202 Identities=23% Similarity=0.286 Sum_probs=170.4
Q ss_pred cCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCC---CcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCcc
Q 039533 626 SGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQH---HGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDF 702 (949)
Q Consensus 626 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 702 (949)
++|++.++||+|+||.||+++...+++.||+|++.... ......+.+|+.++..++|++|+++++++...+ .
T Consensus 1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~-----~ 75 (332)
T cd05623 1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDEN-----N 75 (332)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCC-----E
Confidence 47899999999999999999999889999999986321 222345788999999999999999998875444 7
Q ss_pred ceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEE
Q 039533 703 KASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARV 782 (949)
Q Consensus 703 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl 782 (949)
.++||||+++|+|.+++.. ....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||
T Consensus 76 ~~lv~ey~~~g~L~~~l~~---------~~~~l~~~~~~~~~~qi~~al~~lH~~---~iiHrDlkp~Nili~~~~~~kL 143 (332)
T cd05623 76 LYLVMDYYVGGDLLTLLSK---------FEDRLPEDMARFYLAEMVIAIDSVHQL---HYVHRDIKPDNILMDMNGHIRL 143 (332)
T ss_pred EEEEEeccCCCcHHHHHHH---------hcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEECCCCCEEE
Confidence 8999999999999999962 124588889999999999999999977 9999999999999999999999
Q ss_pred eecccceecCCCCCccccccccCccCccCccccC-----CCccCCccchHHHHHHHHHHHhCCCCCcc
Q 039533 783 GDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGV-----GCEVSTNGDVYSYGILLLELVIGKKPIDI 845 (949)
Q Consensus 783 ~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDiwSlGvvl~elltg~~Pf~~ 845 (949)
+|||++.......... .....||+.|+|||++. ...++.++|||||||++|||++|+.||..
T Consensus 144 ~DfG~a~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~ 210 (332)
T cd05623 144 ADFGSCLKLMEDGTVQ-SSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYA 210 (332)
T ss_pred eecchheecccCCcce-ecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCC
Confidence 9999997654332211 11345999999999876 34578999999999999999999999963
No 281
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=100.00 E-value=2.4e-34 Score=312.71 Aligned_cols=249 Identities=22% Similarity=0.275 Sum_probs=196.2
Q ss_pred CCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCCcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCccceeEe
Q 039533 628 FSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFKASVY 707 (949)
Q Consensus 628 y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~ 707 (949)
|.....||+|+||.||+|....++..||||++........+.+.+|+.++++++|+||+++++.+...+ ..++||
T Consensus 24 ~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~-----~~~lv~ 98 (292)
T cd06658 24 LDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSYLVGD-----ELWVVM 98 (292)
T ss_pred HhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCCCcHHHHHHheecCC-----eEEEEE
Confidence 333467999999999999998889999999987655555667889999999999999999999876544 789999
Q ss_pred eeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEeeccc
Q 039533 708 EFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVGDFGL 787 (949)
Q Consensus 708 e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~DfG~ 787 (949)
||+++++|.+++. ...+++.++..++.|++.|++|||+. +|+||||||+||++++++.++|+|||+
T Consensus 99 e~~~~~~L~~~~~-----------~~~l~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nill~~~~~~kL~dfg~ 164 (292)
T cd06658 99 EFLEGGALTDIVT-----------HTRMNEEQIATVCLSVLRALSYLHNQ---GVIHRDIKSDSILLTSDGRIKLSDFGF 164 (292)
T ss_pred eCCCCCcHHHHHh-----------cCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCEEEccCcc
Confidence 9999999999885 13478899999999999999999977 899999999999999999999999999
Q ss_pred ceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhccccCCCchhh
Q 039533 788 ARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKALPDDVMD 867 (949)
Q Consensus 788 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~ 867 (949)
+.......... ....|+..|+|||+..+..++.++||||||+++|||++|+.||...... ....... .
T Consensus 165 ~~~~~~~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~--~~~~~~~--------~ 232 (292)
T cd06658 165 CAQVSKEVPKR--KSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPL--QAMRRIR--------D 232 (292)
T ss_pred hhhcccccccC--ceeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHH--------h
Confidence 87654332211 1345889999999998888999999999999999999999998532110 0000000 0
Q ss_pred hcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHH
Q 039533 868 IVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHE 927 (949)
Q Consensus 868 ~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 927 (949)
........ .......+.+++.+|+..||++|||++|+++.
T Consensus 233 ~~~~~~~~--------------------~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~ 272 (292)
T cd06658 233 NLPPRVKD--------------------SHKVSSVLRGFLDLMLVREPSQRATAQELLQH 272 (292)
T ss_pred cCCCcccc--------------------ccccCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 00000000 01223457789999999999999999999863
No 282
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=100.00 E-value=8.9e-34 Score=304.11 Aligned_cols=257 Identities=21% Similarity=0.299 Sum_probs=201.6
Q ss_pred CCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCC--CcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCccce
Q 039533 627 GFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQH--HGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFKA 704 (949)
Q Consensus 627 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 704 (949)
+|++.+.||.|+||.||+|.+..+++.||+|++.... ....+++..|++++++++||||+++++++... .....+
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~---~~~~~~ 77 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDR---SNQTLY 77 (265)
T ss_pred CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecC---CCCEEE
Confidence 5888999999999999999998889999999987433 23345788999999999999999999887532 234678
Q ss_pred eEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCC--CCCeEecCCCCCCeeecCCCceEE
Q 039533 705 SVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDC--QPVTAHCDLKPSNVLLDDYMTARV 782 (949)
Q Consensus 705 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~--~~~ivHrDlkp~NIll~~~~~~kl 782 (949)
++|||+++++|.+++.... .....+++..++.++.|++.||+|||..+ ..+++||||||+||++++++.+||
T Consensus 78 ~~~e~~~~~~L~~~l~~~~------~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~~~~kl 151 (265)
T cd08217 78 IVMEYCEGGDLAQLIQKCK------KERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKL 151 (265)
T ss_pred EEehhccCCCHHHHHHHHh------hcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEecCCCEEE
Confidence 9999999999999986321 12356899999999999999999999322 238999999999999999999999
Q ss_pred eecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhccccCC
Q 039533 783 GDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKALP 862 (949)
Q Consensus 783 ~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~ 862 (949)
+|||.+.......... ....++..|+|||++.+..++.++||||||+++|+|++|+.||...... .....
T Consensus 152 ~d~g~~~~~~~~~~~~--~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~--~~~~~------ 221 (265)
T cd08217 152 GDFGLAKILGHDSSFA--KTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARNQL--QLASK------ 221 (265)
T ss_pred ecccccccccCCcccc--cccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcCHH--HHHHH------
Confidence 9999998765443211 1345899999999999888999999999999999999999998643211 11000
Q ss_pred CchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 039533 863 DDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVH 926 (949)
Q Consensus 863 ~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 926 (949)
+.....+. .....+..+.+++.+|++.+|++||++.||++
T Consensus 222 ------~~~~~~~~------------------~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~ 261 (265)
T cd08217 222 ------IKEGKFRR------------------IPYRYSSELNEVIKSMLNVDPDKRPSTEELLQ 261 (265)
T ss_pred ------HhcCCCCC------------------CccccCHHHHHHHHHHccCCcccCCCHHHHhh
Confidence 00000000 00133456889999999999999999999986
No 283
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=100.00 E-value=9.9e-35 Score=321.84 Aligned_cols=192 Identities=25% Similarity=0.301 Sum_probs=159.4
Q ss_pred eeeecCceEEEEEEcCCCEEEEEEEEecCCC---cchHHHHHHHHHHHhc---CCCcceeEEeeeecccccCCccceeEe
Q 039533 634 VGVGSFGSVYKGIIDEGRTTIAVKVFNLQHH---GASRSFIAECKALKSI---RHRNLVKVLTACLGADYRGNDFKASVY 707 (949)
Q Consensus 634 lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l---~h~niv~~~~~~~~~~~~~~~~~~lv~ 707 (949)
||+|+||+||+|++..+++.||||++..... ........|..++.+. +||||+++++++...+ ..++||
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~-----~~~lv~ 75 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDS-----DLYLVT 75 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCC-----eEEEEE
Confidence 6999999999999998899999999864321 2223455666777665 6999999998865544 789999
Q ss_pred eeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEeeccc
Q 039533 708 EFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVGDFGL 787 (949)
Q Consensus 708 e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~DfG~ 787 (949)
||+++|+|.+++. ....+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+
T Consensus 76 e~~~~g~L~~~l~----------~~~~~~~~~~~~~~~qil~al~~LH~~---~ivHrDlkp~Nili~~~~~~kl~Dfg~ 142 (330)
T cd05586 76 DYMSGGELFWHLQ----------KEGRFSEDRAKFYIAELVLALEHLHKY---DIVYRDLKPENILLDATGHIALCDFGL 142 (330)
T ss_pred cCCCCChHHHHHH----------hcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEecCCc
Confidence 9999999999886 234588999999999999999999977 999999999999999999999999999
Q ss_pred ceecCCCCCccccccccCccCccCccccCCC-ccCCccchHHHHHHHHHHHhCCCCCcc
Q 039533 788 ARILSPDHTQTSSFSVKGSLGYIAPEYGVGC-EVSTNGDVYSYGILLLELVIGKKPIDI 845 (949)
Q Consensus 788 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDiwSlGvvl~elltg~~Pf~~ 845 (949)
++........ .....||..|+|||++.+. .++.++||||+||++|||++|+.||..
T Consensus 143 a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~ 199 (330)
T cd05586 143 SKANLTDNKT--TNTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYA 199 (330)
T ss_pred CcCCCCCCCC--ccCccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCC
Confidence 8754322221 1234599999999998765 478999999999999999999999853
No 284
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=100.00 E-value=7e-34 Score=305.79 Aligned_cols=256 Identities=23% Similarity=0.375 Sum_probs=198.3
Q ss_pred CCCCCCeeeeecCceEEEEEEcC-CCEEEEEEEEecCC----------CcchHHHHHHHHHHHh-cCCCcceeEEeeeec
Q 039533 627 GFSSANLVGVGSFGSVYKGIIDE-GRTTIAVKVFNLQH----------HGASRSFIAECKALKS-IRHRNLVKVLTACLG 694 (949)
Q Consensus 627 ~y~~~~~lg~G~~g~Vy~~~~~~-~~~~vavK~~~~~~----------~~~~~~~~~E~~~l~~-l~h~niv~~~~~~~~ 694 (949)
+|++.+.||+|+||.||+|.+.. +++.+|+|.+.... .....++.+|+.++.+ ++||||+++++++..
T Consensus 1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 80 (269)
T cd08528 1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLE 80 (269)
T ss_pred CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEcc
Confidence 48889999999999999999986 57899999986332 1123457788888875 699999999999765
Q ss_pred ccccCCccceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeee
Q 039533 695 ADYRGNDFKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLL 774 (949)
Q Consensus 695 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll 774 (949)
.+ ..++||||+++++|.+++.... .....+++..++.++.|++.|+.|||+. .+++||||+|+||++
T Consensus 81 ~~-----~~~lv~e~~~~~~l~~~l~~~~------~~~~~~~~~~~~~~~~~l~~~l~~lh~~--~~i~H~dl~~~nil~ 147 (269)
T cd08528 81 ND-----RLYIVMDLIEGAPLGEHFNSLK------EKKQRFTEERIWNIFVQMVLALRYLHKE--KRIVHRDLTPNNIML 147 (269)
T ss_pred CC-----eEEEEEecCCCCcHHHHHHHHH------hccCCCCHHHHHHHHHHHHHHHHHhccC--CceeecCCCHHHEEE
Confidence 44 7899999999999999885211 1234688999999999999999999963 279999999999999
Q ss_pred cCCCceEEeecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccccccCchhh
Q 039533 775 DDYMTARVGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLH 854 (949)
Q Consensus 775 ~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~ 854 (949)
+.++.+||+|||.+........ .....|+..|+|||+..+..++.++||||||+++|||++|+.||.......
T Consensus 148 ~~~~~~~l~dfg~~~~~~~~~~---~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~~~---- 220 (269)
T cd08528 148 GEDDKVTITDFGLAKQKQPESK---LTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNMLS---- 220 (269)
T ss_pred CCCCcEEEecccceeecccccc---cccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccCHHH----
Confidence 9999999999999987654431 123458999999999998889999999999999999999999985321110
Q ss_pred hhccccCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHH
Q 039533 855 NFGRKALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHELQ 929 (949)
Q Consensus 855 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~ 929 (949)
. ...+.+....+... ...+..+.+++.+|++.||++||++.||..+++
T Consensus 221 -~--------~~~~~~~~~~~~~~------------------~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~~~ 268 (269)
T cd08528 221 -L--------ATKIVEAVYEPLPE------------------GMYSEDVTDVITSCLTPDAEARPDIIQVSAMIS 268 (269)
T ss_pred -H--------HHHHhhccCCcCCc------------------ccCCHHHHHHHHHHCCCCCccCCCHHHHHHHhc
Confidence 0 00011110000000 022356789999999999999999999999875
No 285
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=100.00 E-value=9.4e-34 Score=302.37 Aligned_cols=249 Identities=24% Similarity=0.387 Sum_probs=197.7
Q ss_pred CCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCC--CcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCccce
Q 039533 627 GFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQH--HGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFKA 704 (949)
Q Consensus 627 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 704 (949)
+|+..+.||+|++|.||+|....+++.+|+|++.... ....+.+.+|++++++++||||+++++.+... ...+
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-----~~~~ 75 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLED-----KALM 75 (256)
T ss_pred CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecC-----CEEE
Confidence 5788899999999999999998889999999987543 23346788999999999999999999886543 3789
Q ss_pred eEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCC-CceEEe
Q 039533 705 SVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDY-MTARVG 783 (949)
Q Consensus 705 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~-~~~kl~ 783 (949)
+||||+++++|.+++... ....+++..+..++.|++.|++|||++ +++||||||+||+++++ +.+||+
T Consensus 76 lv~e~~~~~~L~~~~~~~--------~~~~~~~~~~~~~~~~i~~~l~~lh~~---~i~h~dl~~~nil~~~~~~~~~l~ 144 (256)
T cd08220 76 IVMEYAPGGTLAEYIQKR--------CNSLLDEDTILHFFVQILLALHHVHTK---LILHRDLKTQNILLDKHKMVVKIG 144 (256)
T ss_pred EEEecCCCCCHHHHHHHh--------cccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEEc
Confidence 999999999999999631 134578999999999999999999977 99999999999999854 468999
Q ss_pred ecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhccccCCC
Q 039533 784 DFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKALPD 863 (949)
Q Consensus 784 DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~ 863 (949)
|||.+......... ....|+..|+|||.+.+..++.++||||||+++|+|++|+.||+...... .
T Consensus 145 d~~~~~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~--~---------- 209 (256)
T cd08220 145 DFGISKILSSKSKA---YTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANLPA--L---------- 209 (256)
T ss_pred cCCCceecCCCccc---cccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCchHH--H----------
Confidence 99999876543321 12458899999999998888999999999999999999999986321110 0
Q ss_pred chhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 039533 864 DVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVH 926 (949)
Q Consensus 864 ~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 926 (949)
............ ....+..+.+++.+||+.+|++|||+.|+++
T Consensus 210 -~~~~~~~~~~~~-------------------~~~~~~~l~~li~~~l~~~p~~Rpt~~~ll~ 252 (256)
T cd08220 210 -VLKIMSGTFAPI-------------------SDRYSPDLRQLILSMLNLDPSKRPQLSQIMA 252 (256)
T ss_pred -HHHHHhcCCCCC-------------------CCCcCHHHHHHHHHHccCChhhCCCHHHHhh
Confidence 001110000000 0123456789999999999999999999986
No 286
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=100.00 E-value=8.4e-34 Score=313.04 Aligned_cols=206 Identities=21% Similarity=0.326 Sum_probs=162.7
Q ss_pred CCeeeeecCceEEEEEEcC--CCEEEEEEEEecCCCcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCccceeEee
Q 039533 631 ANLVGVGSFGSVYKGIIDE--GRTTIAVKVFNLQHHGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFKASVYE 708 (949)
Q Consensus 631 ~~~lg~G~~g~Vy~~~~~~--~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e 708 (949)
..+||+|+||.||+|+... +++.||+|.++... ....+.+|++++++++||||+++++++... .....++|||
T Consensus 6 g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~---~~~~~~lv~e 80 (317)
T cd07867 6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTG--ISMSACREIALLRELKHPNVIALQKVFLSH---SDRKVWLLFD 80 (317)
T ss_pred ceEeccCCCeeEEEEEecCCCccceEEEEEecCCC--CcHHHHHHHHHHHhCCCCCeeeEEEEEecc---CCCeEEEEEe
Confidence 4689999999999999753 45789999986432 235678999999999999999999987542 2346789999
Q ss_pred eccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeee----cCCCceEEee
Q 039533 709 FMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLL----DDYMTARVGD 784 (949)
Q Consensus 709 ~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll----~~~~~~kl~D 784 (949)
|+++ +|.+++....... .......+++..+..++.|++.||+|||+. +|+||||||+||++ +.++.+||+|
T Consensus 81 ~~~~-~l~~~~~~~~~~~-~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~~kl~D 155 (317)
T cd07867 81 YAEH-DLWHIIKFHRASK-ANKKPMQLPRSMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVKIAD 155 (317)
T ss_pred eeCC-cHHHHHHhhhccc-cCCCCccCCHHHHHHHHHHHHHHHHHHHhC---CEEcCCCCHHHEEEccCCCCCCcEEEee
Confidence 9864 7877775321111 111234588999999999999999999977 89999999999999 5667999999
Q ss_pred cccceecCCCCCc-cccccccCccCccCccccCCC-ccCCccchHHHHHHHHHHHhCCCCCccc
Q 039533 785 FGLARILSPDHTQ-TSSFSVKGSLGYIAPEYGVGC-EVSTNGDVYSYGILLLELVIGKKPIDIM 846 (949)
Q Consensus 785 fG~a~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~-~~~~~sDiwSlGvvl~elltg~~Pf~~~ 846 (949)
||+++........ .......||..|+|||++.+. .++.++|||||||++|||+||++||...
T Consensus 156 fG~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~~ 219 (317)
T cd07867 156 MGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCR 219 (317)
T ss_pred ccceeccCCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCcccc
Confidence 9999876543321 111234589999999998764 5789999999999999999999999643
No 287
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=100.00 E-value=1e-33 Score=302.44 Aligned_cols=248 Identities=26% Similarity=0.326 Sum_probs=197.1
Q ss_pred CCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCC-----cchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCc
Q 039533 627 GFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHH-----GASRSFIAECKALKSIRHRNLVKVLTACLGADYRGND 701 (949)
Q Consensus 627 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-----~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 701 (949)
+|+..+.||+|++|.||+|....+++.|++|++..... ...+.+.+|++++++++|+||+++++++....
T Consensus 1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~----- 75 (258)
T cd06632 1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREED----- 75 (258)
T ss_pred CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCC-----
Confidence 47888999999999999999988899999999875432 23467889999999999999999999875444
Q ss_pred cceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceE
Q 039533 702 FKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTAR 781 (949)
Q Consensus 702 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~k 781 (949)
..++||||+++++|.+++.. ...+++..+..++.|++.|++|||+. +++||||+|+||+++.++.+|
T Consensus 76 ~~~lv~e~~~~~~L~~~~~~----------~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~~~ni~~~~~~~~k 142 (258)
T cd06632 76 NLYIFLELVPGGSLAKLLKK----------YGSFPEPVIRLYTRQILLGLEYLHDR---NTVHRDIKGANILVDTNGVVK 142 (258)
T ss_pred eEEEEEEecCCCcHHHHHHh----------cCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEE
Confidence 78999999999999999862 23578899999999999999999977 899999999999999999999
Q ss_pred EeecccceecCCCCCccccccccCccCccCccccCCCc-cCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhcccc
Q 039533 782 VGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCE-VSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKA 860 (949)
Q Consensus 782 l~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~ 860 (949)
|+|||.+........ .....|+..|+|||...... ++.++|+|||||++|+|++|+.||........ ......
T Consensus 143 l~d~~~~~~~~~~~~---~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~~~-~~~~~~-- 216 (258)
T cd06632 143 LADFGMAKQVVEFSF---AKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEGVAA-VFKIGR-- 216 (258)
T ss_pred EccCccceecccccc---ccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcHHHH-HHHHHh--
Confidence 999999887544331 12345889999999987766 89999999999999999999999964321100 000000
Q ss_pred CCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 039533 861 LPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVH 926 (949)
Q Consensus 861 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 926 (949)
. ..... ........+.+++.+|++.+|++||++.|+++
T Consensus 217 -~--------~~~~~-------------------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~ 254 (258)
T cd06632 217 -S--------KELPP-------------------IPDHLSDEAKDFILKCLQRDPSLRPTAAELLE 254 (258)
T ss_pred -c--------ccCCC-------------------cCCCcCHHHHHHHHHHhhcCcccCcCHHHHhc
Confidence 0 00000 00122456788999999999999999999875
No 288
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=100.00 E-value=3.2e-34 Score=307.70 Aligned_cols=254 Identities=22% Similarity=0.299 Sum_probs=200.6
Q ss_pred cCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCC-cchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCccce
Q 039533 626 SGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHH-GASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFKA 704 (949)
Q Consensus 626 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 704 (949)
++|+..+.||+|++|.||+|.+..+++.||+|++..... ...+++.+|++++++++||||+++++++.... ..+
T Consensus 1 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~-----~~~ 75 (265)
T cd06605 1 DDLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYNNG-----DIS 75 (265)
T ss_pred CcchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeeecCC-----EEE
Confidence 367888999999999999999998899999999875532 34467889999999999999999999876543 789
Q ss_pred eEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhh-CCCCCeEecCCCCCCeeecCCCceEEe
Q 039533 705 SVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHH-DCQPVTAHCDLKPSNVLLDDYMTARVG 783 (949)
Q Consensus 705 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~-~~~~~ivHrDlkp~NIll~~~~~~kl~ 783 (949)
+|+||+++++|.+++... ...++...+..++.|++.|++|||+ . +++||||||+||++++++.++|+
T Consensus 76 lv~e~~~~~~L~~~~~~~---------~~~~~~~~~~~~~~~l~~~l~~lH~~~---~i~H~dl~~~ni~~~~~~~~~l~ 143 (265)
T cd06605 76 ICMEYMDGGSLDKILKEV---------QGRIPERILGKIAVAVLKGLTYLHEKH---KIIHRDVKPSNILVNSRGQIKLC 143 (265)
T ss_pred EEEEecCCCcHHHHHHHc---------cCCCCHHHHHHHHHHHHHHHHHHcCCC---CeecCCCCHHHEEECCCCCEEEe
Confidence 999999999999998621 2568889999999999999999997 5 99999999999999999999999
Q ss_pred ecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhccccCCC
Q 039533 784 DFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKALPD 863 (949)
Q Consensus 784 DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~ 863 (949)
|||.+......... ...++..|+|||+..+..++.++||||||+++|+|++|+.||...............
T Consensus 144 d~g~~~~~~~~~~~----~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~----- 214 (265)
T cd06605 144 DFGVSGQLVNSLAK----TFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELLQ----- 214 (265)
T ss_pred ecccchhhHHHHhh----cccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCccccccccHHHHHH-----
Confidence 99998765432221 145889999999999889999999999999999999999999643221111111110
Q ss_pred chhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 039533 864 DVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVH 926 (949)
Q Consensus 864 ~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 926 (949)
..........+ ....+..+.+++.+|+..+|++|||+.|++.
T Consensus 215 ---~~~~~~~~~~~------------------~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~ 256 (265)
T cd06605 215 ---YIVNEPPPRLP------------------SGKFSPDFQDFVNLCLIKDPRERPSYKELLE 256 (265)
T ss_pred ---HHhcCCCCCCC------------------hhhcCHHHHHHHHHHcCCCchhCcCHHHHhh
Confidence 00000000000 0014556889999999999999999999875
No 289
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=100.00 E-value=1e-33 Score=302.35 Aligned_cols=252 Identities=28% Similarity=0.479 Sum_probs=198.6
Q ss_pred CCCCCeeeeecCceEEEEEEcCCC----EEEEEEEEecCCCc-chHHHHHHHHHHHhcCCCcceeEEeeeecccccCCcc
Q 039533 628 FSSANLVGVGSFGSVYKGIIDEGR----TTIAVKVFNLQHHG-ASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDF 702 (949)
Q Consensus 628 y~~~~~lg~G~~g~Vy~~~~~~~~----~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 702 (949)
+++.+.||.|+||.||+|++...+ ..||+|+++..... ..+.+..|++.+++++|+||+++++++...+ .
T Consensus 1 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~-----~ 75 (258)
T smart00219 1 LTLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCTEEE-----P 75 (258)
T ss_pred CcccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEcCCC-----e
Confidence 457789999999999999998655 88999999755433 4578999999999999999999999976543 7
Q ss_pred ceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEE
Q 039533 703 KASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARV 782 (949)
Q Consensus 703 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl 782 (949)
.+++|||+++++|.+++... ....+++.++..++.|++.|++|||+. +++||||||+||++++++.++|
T Consensus 76 ~~~i~e~~~~~~l~~~~~~~--------~~~~~~~~~~~~~~~ql~~~l~~lh~~---~~~h~dl~~~nil~~~~~~~~l 144 (258)
T smart00219 76 LMIVMEYMEGGDLLDYLRKN--------RPKELSLSDLLSFALQIARGMEYLESK---NFIHRDLAARNCLVGENLVVKI 144 (258)
T ss_pred eEEEEeccCCCCHHHHHHhh--------hhccCCHHHHHHHHHHHHHHHHHHhcC---CeeecccccceEEEccCCeEEE
Confidence 89999999999999999621 111289999999999999999999977 9999999999999999999999
Q ss_pred eecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHh-CCCCCccccccCchhhhhccccC
Q 039533 783 GDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVI-GKKPIDIMFEGDINLHNFGRKAL 861 (949)
Q Consensus 783 ~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~ellt-g~~Pf~~~~~~~~~~~~~~~~~~ 861 (949)
+|||.++........... ...++..|+|||...+..++.++||||+|+++|||++ |..||...... ......
T Consensus 145 ~dfg~~~~~~~~~~~~~~-~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~~--~~~~~~---- 217 (258)
T smart00219 145 SDFGLSRDLYDDDYYKKK-GGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMSNE--EVLEYL---- 217 (258)
T ss_pred cccCCceecccccccccc-cCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCHH--HHHHHH----
Confidence 999999877654332211 2236789999999988889999999999999999998 78887532110 000000
Q ss_pred CCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHH
Q 039533 862 PDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHEL 928 (949)
Q Consensus 862 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L 928 (949)
....... .....+.++.+++.+|+..+|++|||+.|+++.|
T Consensus 218 -------~~~~~~~-------------------~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~l 258 (258)
T smart00219 218 -------KKGYRLP-------------------KPENCPPEIYKLMLQCWAEDPEDRPTFSELVEIL 258 (258)
T ss_pred -------hcCCCCC-------------------CCCcCCHHHHHHHHHHCcCChhhCcCHHHHHhhC
Confidence 0000000 0012355688999999999999999999998764
No 290
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=100.00 E-value=4.9e-34 Score=317.14 Aligned_cols=290 Identities=20% Similarity=0.214 Sum_probs=206.2
Q ss_pred hcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecC--CCcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCcc
Q 039533 625 TSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQ--HHGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDF 702 (949)
Q Consensus 625 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 702 (949)
..+|.+.+.||+|+||+||+|++..+++.||||.++.. .......+.+|+.++++++|+||+++++++..........
T Consensus 4 ~~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~ 83 (337)
T cd07858 4 DTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFND 83 (337)
T ss_pred ccceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCc
Confidence 45799999999999999999999989999999998643 2233456788999999999999999999876544333346
Q ss_pred ceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEE
Q 039533 703 KASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARV 782 (949)
Q Consensus 703 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl 782 (949)
.++||||+. ++|.+++. ....+++..+..++.|++.||.|||+. +++||||||+||+++.++.+||
T Consensus 84 ~~lv~e~~~-~~L~~~~~----------~~~~l~~~~~~~i~~qi~~aL~~LH~~---~i~H~dlkp~Nil~~~~~~~kL 149 (337)
T cd07858 84 VYIVYELMD-TDLHQIIR----------SSQTLSDDHCQYFLYQLLRGLKYIHSA---NVLHRDLKPSNLLLNANCDLKI 149 (337)
T ss_pred EEEEEeCCC-CCHHHHHh----------cCCCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCEEE
Confidence 899999996 68988885 234589999999999999999999977 8999999999999999999999
Q ss_pred eecccceecCCCCCccccccccCccCccCccccCC-CccCCccchHHHHHHHHHHHhCCCCCccccccC-ch-hhhhccc
Q 039533 783 GDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVG-CEVSTNGDVYSYGILLLELVIGKKPIDIMFEGD-IN-LHNFGRK 859 (949)
Q Consensus 783 ~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~-~~-~~~~~~~ 859 (949)
+|||+++........ .....++..|+|||.+.+ ..++.++|||||||++|+|++|+.||....... .. .......
T Consensus 150 ~Dfg~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~ 227 (337)
T cd07858 150 CDFGLARTTSEKGDF--MTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELLGS 227 (337)
T ss_pred CcCccccccCCCccc--ccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCC
Confidence 999999876443211 123457889999998765 468899999999999999999999996431100 00 0000000
Q ss_pred cCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHH--HHHhHHh
Q 039533 860 ALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHE--LQSIKNI 934 (949)
Q Consensus 860 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~--L~~i~~~ 934 (949)
..++....+.+... .....................++..+.+++.+|++.+|++|||++|+++. +..+...
T Consensus 228 ~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h~~~~~~~~~ 300 (337)
T cd07858 228 PSEEDLGFIRNEKA----RRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRITVEEALAHPYLASLHDP 300 (337)
T ss_pred CChHHhhhcCchhh----hHHHHhcCcccccCHHHHcccCCHHHHHHHHHHhcCChhhccCHHHHHcCcchhhhcCc
Confidence 00000000000000 00000000000000001112346678999999999999999999999877 6655443
No 291
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=100.00 E-value=7.1e-34 Score=311.48 Aligned_cols=257 Identities=22% Similarity=0.235 Sum_probs=197.7
Q ss_pred cCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCC---cchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCcc
Q 039533 626 SGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHH---GASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDF 702 (949)
Q Consensus 626 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 702 (949)
++|++.+.||+|+||.||+|.+..+++.||+|.+..... ...+.+.+|+++++.++||||+++++.+... +.
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-----~~ 75 (305)
T cd05609 1 EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETK-----RH 75 (305)
T ss_pred CCceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecC-----CE
Confidence 468899999999999999999998899999999875432 2345778999999999999999999886543 37
Q ss_pred ceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEE
Q 039533 703 KASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARV 782 (949)
Q Consensus 703 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl 782 (949)
.++||||+++++|.+++. ....+++..+..++.|++.|++|||+. +++||||||+||+++.++.+||
T Consensus 76 ~~lv~e~~~g~~L~~~l~----------~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~NIll~~~~~~~l 142 (305)
T cd05609 76 LCMVMEYVEGGDCATLLK----------NIGALPVDMARMYFAETVLALEYLHNY---GIVHRDLKPDNLLITSMGHIKL 142 (305)
T ss_pred EEEEEecCCCCcHHHHHH----------HcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCchHHEEECCCCCEEE
Confidence 899999999999999996 224588899999999999999999977 8999999999999999999999
Q ss_pred eecccceecCCCCC-------------ccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCcccccc
Q 039533 783 GDFGLARILSPDHT-------------QTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEG 849 (949)
Q Consensus 783 ~DfG~a~~~~~~~~-------------~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~ 849 (949)
+|||.++....... ........++..|+|||.+.+..++.++|||||||++||+++|+.||......
T Consensus 143 ~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~~ 222 (305)
T cd05609 143 TDFGLSKIGLMSLTTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPE 222 (305)
T ss_pred eeCCCccccCcCccccccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH
Confidence 99999874211110 00011234788999999998888999999999999999999999998532111
Q ss_pred CchhhhhccccCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHH
Q 039533 850 DINLHNFGRKALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHELQ 929 (949)
Q Consensus 850 ~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~ 929 (949)
. ... ....... ..+. .....+..+.+++.+|++.+|++||++.++.+.++
T Consensus 223 ~-----~~~--------~~~~~~~-~~~~----------------~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~ 272 (305)
T cd05609 223 E-----LFG--------QVISDDI-EWPE----------------GDEALPADAQDLISRLLRQNPLERLGTGGAFEVKQ 272 (305)
T ss_pred H-----HHH--------HHHhccc-CCCC----------------ccccCCHHHHHHHHHHhccChhhccCccCHHHHHh
Confidence 0 000 0000000 0000 00023456789999999999999999776666665
Q ss_pred H
Q 039533 930 S 930 (949)
Q Consensus 930 ~ 930 (949)
.
T Consensus 273 ~ 273 (305)
T cd05609 273 H 273 (305)
T ss_pred C
Confidence 4
No 292
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=100.00 E-value=3.8e-34 Score=311.97 Aligned_cols=248 Identities=23% Similarity=0.282 Sum_probs=196.3
Q ss_pred CCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCCcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCccceeEee
Q 039533 629 SSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFKASVYE 708 (949)
Q Consensus 629 ~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e 708 (949)
.....||+|+||.||+|.+..+++.||+|++........+.+.+|+.+++.++||||+++++++...+ ..++|||
T Consensus 24 ~~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~-----~~~iv~e 98 (297)
T cd06659 24 ENYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSYLVGE-----ELWVLME 98 (297)
T ss_pred HhhhhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhCCCCchhhhhhheeeCC-----eEEEEEe
Confidence 33457999999999999998889999999997655555677889999999999999999999876544 7899999
Q ss_pred eccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEeecccc
Q 039533 709 FMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVGDFGLA 788 (949)
Q Consensus 709 ~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~DfG~a 788 (949)
|+++++|.+++. ...+++..+..++.|++.||+|||+. +++||||||+||+++.++.+||+|||++
T Consensus 99 ~~~~~~L~~~~~-----------~~~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~dl~p~Nill~~~~~~kL~dfg~~ 164 (297)
T cd06659 99 FLQGGALTDIVS-----------QTRLNEEQIATVCESVLQALCYLHSQ---GVIHRDIKSDSILLTLDGRVKLSDFGFC 164 (297)
T ss_pred cCCCCCHHHHHh-----------hcCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHeEEccCCcEEEeechhH
Confidence 999999999875 23478999999999999999999977 8999999999999999999999999998
Q ss_pred eecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhccccCCCchhhh
Q 039533 789 RILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKALPDDVMDI 868 (949)
Q Consensus 789 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~ 868 (949)
.......... ....|+..|+|||++.+..++.++|||||||++|||++|+.||...... ............
T Consensus 165 ~~~~~~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~--~~~~~~~~~~~~----- 235 (297)
T cd06659 165 AQISKDVPKR--KSLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPV--QAMKRLRDSPPP----- 235 (297)
T ss_pred hhcccccccc--cceecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHhccCCC-----
Confidence 7654332211 2345899999999999888999999999999999999999998532111 000000000000
Q ss_pred cccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHH
Q 039533 869 VDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHE 927 (949)
Q Consensus 869 ~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 927 (949)
... .....+..+.+++.+|++.+|++||+++|+++.
T Consensus 236 ---~~~--------------------~~~~~~~~l~~~i~~~l~~~P~~Rps~~~ll~~ 271 (297)
T cd06659 236 ---KLK--------------------NAHKISPVLRDFLERMLTREPQERATAQELLDH 271 (297)
T ss_pred ---Ccc--------------------ccCCCCHHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence 000 001223457889999999999999999999884
No 293
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=100.00 E-value=1.2e-33 Score=302.97 Aligned_cols=253 Identities=26% Similarity=0.345 Sum_probs=204.1
Q ss_pred cCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCC-cchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCccce
Q 039533 626 SGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHH-GASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFKA 704 (949)
Q Consensus 626 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 704 (949)
++|++.+.||+|++|.||+|++..+++.||+|++..... ...+.+.+|+..+.+++|+|++++++++.... ..+
T Consensus 1 ~~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~-----~~~ 75 (264)
T cd06623 1 SDLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFYKEG-----EIS 75 (264)
T ss_pred CcceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEccCC-----eEE
Confidence 468889999999999999999998899999999876543 34578999999999999999999999976544 789
Q ss_pred eEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhh-CCCCCeEecCCCCCCeeecCCCceEEe
Q 039533 705 SVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHH-DCQPVTAHCDLKPSNVLLDDYMTARVG 783 (949)
Q Consensus 705 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~-~~~~~ivHrDlkp~NIll~~~~~~kl~ 783 (949)
+||||+++++|.+++.. ...+++..+..++.|+++|++|||+ . +++||||+|+||+++.++.++|+
T Consensus 76 lv~e~~~~~~L~~~l~~----------~~~l~~~~~~~~~~~l~~~l~~lh~~~---~~~H~~l~~~ni~~~~~~~~~l~ 142 (264)
T cd06623 76 IVLEYMDGGSLADLLKK----------VGKIPEPVLAYIARQILKGLDYLHTKR---HIIHRDIKPSNLLINSKGEVKIA 142 (264)
T ss_pred EEEEecCCCcHHHHHHH----------cCCCCHHHHHHHHHHHHHHHHHHhccC---CCccCCCCHHHEEECCCCCEEEc
Confidence 99999999999999962 2568999999999999999999997 6 99999999999999999999999
Q ss_pred ecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhccccCCC
Q 039533 784 DFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKALPD 863 (949)
Q Consensus 784 DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~ 863 (949)
|||.+.......... ....++..|+|||.+.+..++.++||||||+++|||++|+.||...... .....
T Consensus 143 df~~~~~~~~~~~~~--~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~--~~~~~------- 211 (264)
T cd06623 143 DFGISKVLENTLDQC--NTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQP--SFFEL------- 211 (264)
T ss_pred cCccceecccCCCcc--cceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccccc--CHHHH-------
Confidence 999998765443322 1234789999999999888999999999999999999999999644320 00000
Q ss_pred chhhhcccCCCCCchhhhhhhchhhhhhhhhhHHH-HHHHHHHHhhccccCCCCCCCCHHHHHHH
Q 039533 864 DVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIE-CLISMVRIGVACSMELPQDRTNMTNVVHE 927 (949)
Q Consensus 864 ~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 927 (949)
...+........+ .. .+..+.+++.+|++.+|++||++.|+++.
T Consensus 212 -~~~~~~~~~~~~~-------------------~~~~~~~l~~li~~~l~~~p~~R~~~~~ll~~ 256 (264)
T cd06623 212 -MQAICDGPPPSLP-------------------AEEFSPEFRDFISACLQKDPKKRPSAAELLQH 256 (264)
T ss_pred -HHHHhcCCCCCCC-------------------cccCCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 0011110000000 11 45678999999999999999999999873
No 294
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.3e-35 Score=315.51 Aligned_cols=251 Identities=23% Similarity=0.282 Sum_probs=201.4
Q ss_pred CCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCCcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCccceeE
Q 039533 627 GFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFKASV 706 (949)
Q Consensus 627 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv 706 (949)
-|.++..||.|+||.||+|..+.++-..|.|++.........+|.-|+++|...+||+||++++.|+... ..+|+
T Consensus 33 ~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~CdHP~ivkLl~ayy~en-----kLwil 107 (1187)
T KOG0579|consen 33 HWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAECDHPVIVKLLSAYYFEN-----KLWIL 107 (1187)
T ss_pred HHHHHhhhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcCCChHHHHHHHHHhccC-----ceEEE
Confidence 3667788999999999999999888888999998887778889999999999999999999998865333 78999
Q ss_pred eeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEeecc
Q 039533 707 YEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVGDFG 786 (949)
Q Consensus 707 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~DfG 786 (949)
.|||.||..+..+- +-+..+++.++..+++|++.||.|||++ .|||||||..|||++-+|.++|+|||
T Consensus 108 iEFC~GGAVDaiml---------EL~r~LtE~QIqvvc~q~ldALn~LHs~---~iIHRDLKAGNiL~TldGdirLADFG 175 (1187)
T KOG0579|consen 108 IEFCGGGAVDAIML---------ELGRVLTEDQIQVVCYQVLDALNWLHSQ---NIIHRDLKAGNILLTLDGDIRLADFG 175 (1187)
T ss_pred EeecCCchHhHHHH---------HhccccchHHHHHHHHHHHHHHHHHhhc---chhhhhccccceEEEecCcEeeeccc
Confidence 99999999988875 2356799999999999999999999988 89999999999999999999999999
Q ss_pred cceecCCCCCccccccccCccCccCccccC-----CCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhccccC
Q 039533 787 LARILSPDHTQTSSFSVKGSLGYIAPEYGV-----GCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKAL 861 (949)
Q Consensus 787 ~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~ 861 (949)
.+...... ......+.||+.|||||+.. ..+|++++||||||+++.||..+.+|....... .
T Consensus 176 VSAKn~~t--~qkRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnpM-----R------ 242 (1187)
T KOG0579|consen 176 VSAKNKST--RQKRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNPM-----R------ 242 (1187)
T ss_pred ccccchhH--HhhhccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccchH-----H------
Confidence 88643222 22233677999999999854 467999999999999999999999996432111 0
Q ss_pred CCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 039533 862 PDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVH 926 (949)
Q Consensus 862 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 926 (949)
++-.....+| ...-.+......+.+++.+|+..||..||+++++++
T Consensus 243 ------VllKiaKSeP-------------PTLlqPS~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~ 288 (1187)
T KOG0579|consen 243 ------VLLKIAKSEP-------------PTLLQPSHWSRSFSDFLKRCLVKNPRNRPPAAQLLK 288 (1187)
T ss_pred ------HHHHHhhcCC-------------CcccCcchhhhHHHHHHHHHHhcCCccCCCHHHHhh
Confidence 0000000111 011112244556889999999999999999999864
No 295
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=100.00 E-value=1.4e-33 Score=306.48 Aligned_cols=274 Identities=22% Similarity=0.270 Sum_probs=199.7
Q ss_pred CCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCC--CcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCccce
Q 039533 627 GFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQH--HGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFKA 704 (949)
Q Consensus 627 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 704 (949)
+|++.+.||+|++|.||+|.+..+++.||+|++.... ....+.+.+|+.++++++||||+++++++.... ..+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~-----~~~ 75 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHGS-----GFV 75 (286)
T ss_pred CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecCC-----eeE
Confidence 5888999999999999999998889999999997544 233467899999999999999999999976543 789
Q ss_pred eEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEee
Q 039533 705 SVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVGD 784 (949)
Q Consensus 705 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~D 784 (949)
+||||+ +++|.+++.. ....+++.+++.++.|+++||+|||+. +++|+||||+||+++.++.++|+|
T Consensus 76 ~v~e~~-~~~L~~~~~~---------~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~~~~~~~~~l~d 142 (286)
T cd07832 76 LVMEYM-PSDLSEVLRD---------EERPLPEAQVKSYMRMLLKGVAYMHAN---GIMHRDLKPANLLISADGVLKIAD 142 (286)
T ss_pred EEeccc-CCCHHHHHHh---------cCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCcCHHHEEEcCCCcEEEee
Confidence 999999 9999999862 224589999999999999999999977 899999999999999999999999
Q ss_pred cccceecCCCCCccccccccCccCccCccccCCC-ccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhc---ccc
Q 039533 785 FGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGC-EVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFG---RKA 860 (949)
Q Consensus 785 fG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~---~~~ 860 (949)
||.+........ .......|+..|+|||++.+. .++.++||||+|+++|||++|++||....... .+.... ...
T Consensus 143 fg~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~-~~~~~~~~~~~~ 220 (286)
T cd07832 143 FGLARLFSEEEP-RLYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIE-QLAIVFRTLGTP 220 (286)
T ss_pred eeecccccCCCC-CccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHHH-HHHHHHHHcCCC
Confidence 999987654332 111134589999999998654 46899999999999999999988875332111 000000 000
Q ss_pred CCCchhhhcccCCCCCchhhhhhhchhhhhhhh-hhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 039533 861 LPDDVMDIVDSSLLPDDEDLILTGNQRQKQARI-NSIIECLISMVRIGVACSMELPQDRTNMTNVVH 926 (949)
Q Consensus 861 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 926 (949)
.+....+..+ ..+....... ......+ ....+....+.+++.+|++.+|++|||++++++
T Consensus 221 ~~~~~~~~~~---~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~ 281 (286)
T cd07832 221 NEETWPGLTS---LPDYNKITFP---ESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALR 281 (286)
T ss_pred ChHHHhhccC---cchhhcccCC---CCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhh
Confidence 0000000000 0000000000 0000000 001133477899999999999999999999975
No 296
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=100.00 E-value=1.4e-33 Score=308.22 Aligned_cols=274 Identities=21% Similarity=0.233 Sum_probs=197.6
Q ss_pred CCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCCc-----chHHHHHHHHHHHhcCCCcceeEEeeeecccccCCc
Q 039533 627 GFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHG-----ASRSFIAECKALKSIRHRNLVKVLTACLGADYRGND 701 (949)
Q Consensus 627 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~-----~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 701 (949)
+|++.+.||+|++|.||+|.+..+++.||||+++..... ....+..|++++++++|+||+++++++.+. +
T Consensus 1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~-----~ 75 (298)
T cd07841 1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHK-----S 75 (298)
T ss_pred CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecC-----C
Confidence 478889999999999999999888999999999754322 235677899999999999999999997653 3
Q ss_pred cceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceE
Q 039533 702 FKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTAR 781 (949)
Q Consensus 702 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~k 781 (949)
..++||||+ +++|.+++.. ....+++..+..++.|+++||+|||++ +|+||||||+||+++.++.++
T Consensus 76 ~~~lv~e~~-~~~L~~~i~~---------~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dl~p~nill~~~~~~~ 142 (298)
T cd07841 76 NINLVFEFM-ETDLEKVIKD---------KSIVLTPADIKSYMLMTLRGLEYLHSN---WILHRDLKPNNLLIASDGVLK 142 (298)
T ss_pred EEEEEEccc-CCCHHHHHhc---------cCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCChhhEEEcCCCCEE
Confidence 789999999 8999999962 112589999999999999999999977 899999999999999999999
Q ss_pred EeecccceecCCCCCccccccccCccCccCccccCC-CccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhcccc
Q 039533 782 VGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVG-CEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKA 860 (949)
Q Consensus 782 l~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~ 860 (949)
|+|||.++......... ....++..|+|||.+.+ ..++.++|||||||++|||++|.+||......+ .+..... .
T Consensus 143 l~dfg~~~~~~~~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~-~~~~~~~-~ 218 (298)
T cd07841 143 LADFGLARSFGSPNRKM--THQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDID-QLGKIFE-A 218 (298)
T ss_pred EccceeeeeccCCCccc--cccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccHH-HHHHHHH-H
Confidence 99999998765432211 12346788999998765 457899999999999999999988775322111 0100000 0
Q ss_pred CCCc-hhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 039533 861 LPDD-VMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVH 926 (949)
Q Consensus 861 ~~~~-~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 926 (949)
.... .....+........ .. ..................+.+++.+|++.+|++|||++||++
T Consensus 219 ~~~~~~~~~~~~~~~~~~~--~~--~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~ 281 (298)
T cd07841 219 LGTPTEENWPGVTSLPDYV--EF--KPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALE 281 (298)
T ss_pred cCCCchhhhhhcccccccc--cc--cccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhh
Confidence 0000 00000000000000 00 000000000011234567899999999999999999999987
No 297
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=100.00 E-value=1.8e-33 Score=301.59 Aligned_cols=253 Identities=25% Similarity=0.357 Sum_probs=199.4
Q ss_pred CCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCCc--chHHHHHHHHHHHhcCCCcceeEEeeeecccccCCccce
Q 039533 627 GFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHG--ASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFKA 704 (949)
Q Consensus 627 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 704 (949)
+|++.+.||+|+||.||+|....+++.||+|+++..... ..+.+..|+.++++++|+||+++++++...+ ..+
T Consensus 1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~-----~~~ 75 (264)
T cd06626 1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHRE-----KVY 75 (264)
T ss_pred CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecCC-----EEE
Confidence 588899999999999999999888999999999865543 5578999999999999999999999865444 789
Q ss_pred eEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEee
Q 039533 705 SVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVGD 784 (949)
Q Consensus 705 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~D 784 (949)
+|+||+++++|.+++. ....+++..+..++.|+++|++|||+. +++||||+|+||++++++.+||+|
T Consensus 76 lv~e~~~~~~L~~~~~----------~~~~~~~~~~~~i~~~i~~~l~~lh~~---~i~H~dl~~~nil~~~~~~~kl~d 142 (264)
T cd06626 76 IFMEYCSGGTLEELLE----------HGRILDEHVIRVYTLQLLEGLAYLHSH---GIVHRDIKPANIFLDHNGVIKLGD 142 (264)
T ss_pred EEEecCCCCcHHHHHh----------hcCCCChHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEcc
Confidence 9999999999999986 223478889999999999999999977 899999999999999999999999
Q ss_pred cccceecCCCCCccc--cccccCccCccCccccCCCc---cCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhccc
Q 039533 785 FGLARILSPDHTQTS--SFSVKGSLGYIAPEYGVGCE---VSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRK 859 (949)
Q Consensus 785 fG~a~~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~---~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~ 859 (949)
||.+........... .....++..|+|||++.+.. ++.++||||||+++||+++|+.||....... ........
T Consensus 143 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~-~~~~~~~~ 221 (264)
T cd06626 143 FGCAVKLKNNTTTMGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEF-QIMFHVGA 221 (264)
T ss_pred cccccccCCCCCcccccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcchH-HHHHHHhc
Confidence 999987654433211 11245788999999988766 8899999999999999999999996332110 00000000
Q ss_pred cCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 039533 860 ALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVH 926 (949)
Q Consensus 860 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 926 (949)
. ..+. .+........+.+++.+|++.+|++||++.|++.
T Consensus 222 ---~-----~~~~--------------------~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~ 260 (264)
T cd06626 222 ---G-----HKPP--------------------IPDSLQLSPEGKDFLDRCLESDPKKRPTASELLQ 260 (264)
T ss_pred ---C-----CCCC--------------------CCcccccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 0 0000 0001123456778999999999999999999874
No 298
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=100.00 E-value=1.7e-33 Score=302.31 Aligned_cols=259 Identities=22% Similarity=0.303 Sum_probs=202.3
Q ss_pred cCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCC-CcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCccce
Q 039533 626 SGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQH-HGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFKA 704 (949)
Q Consensus 626 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 704 (949)
++|++.+.||.|+||+||+|....++..+|+|++.... ....+.+.+|++.++.++|+||+++++.+...+ ..+
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~-----~~~ 75 (267)
T cd06610 1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVVGD-----ELW 75 (267)
T ss_pred CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEeeCC-----EEE
Confidence 47899999999999999999998888999999986433 224578899999999999999999998875544 789
Q ss_pred eEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEee
Q 039533 705 SVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVGD 784 (949)
Q Consensus 705 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~D 784 (949)
+||||+++++|.+++.... ....+++..+..++.|++.|++|||+. +++||||||+||++++++.++|+|
T Consensus 76 iv~e~~~~~~l~~~~~~~~-------~~~~~~~~~~~~~~~ql~~al~~lh~~---~i~h~~l~p~ni~~~~~~~~~l~d 145 (267)
T cd06610 76 LVMPYLSGGSLLDIMKSSY-------PRGGLDEAIIATVLKEVLKGLEYLHSN---GQIHRDIKAGNILLGEDGSVKIAD 145 (267)
T ss_pred EEEeccCCCcHHHHHHHhc-------ccCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHhEEEcCCCCEEEcc
Confidence 9999999999999996211 124588999999999999999999977 999999999999999999999999
Q ss_pred cccceecCCCCCcc--ccccccCccCccCccccCCC-ccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhccccC
Q 039533 785 FGLARILSPDHTQT--SSFSVKGSLGYIAPEYGVGC-EVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKAL 861 (949)
Q Consensus 785 fG~a~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~-~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~ 861 (949)
||.+..+....... ......|+..|+|||++... .++.++|+|||||++|||++|+.||....... .+.......
T Consensus 146 f~~~~~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~-~~~~~~~~~- 223 (267)
T cd06610 146 FGVSASLADGGDRTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMK-VLMLTLQND- 223 (267)
T ss_pred cchHHHhccCccccccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChhh-hHHHHhcCC-
Confidence 99998765543321 12234588999999998876 78999999999999999999999996432211 011100000
Q ss_pred CCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 039533 862 PDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVH 926 (949)
Q Consensus 862 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 926 (949)
.+...... .....+..+.+++.+|++.||++||++.|+++
T Consensus 224 --------~~~~~~~~-----------------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~ 263 (267)
T cd06610 224 --------PPSLETGA-----------------DYKKYSKSFRKMISLCLQKDPSKRPTAEELLK 263 (267)
T ss_pred --------CCCcCCcc-----------------ccccccHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence 00000000 01134566789999999999999999999975
No 299
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=100.00 E-value=9.4e-34 Score=308.13 Aligned_cols=278 Identities=21% Similarity=0.252 Sum_probs=200.6
Q ss_pred cCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCC--CcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCccc
Q 039533 626 SGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQH--HGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFK 703 (949)
Q Consensus 626 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 703 (949)
++|++.+.||+|++|.||+|.+..+++.||+|+++... ....+.+.+|++++++++|+||+++++++...+ ..
T Consensus 1 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~-----~~ 75 (288)
T cd07833 1 NKYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKG-----RL 75 (288)
T ss_pred CceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEECC-----EE
Confidence 36889999999999999999999889999999987432 233467899999999999999999999976543 78
Q ss_pred eeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEe
Q 039533 704 ASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVG 783 (949)
Q Consensus 704 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~ 783 (949)
++||||++++.+..+.. ....+++.++..++.|++.|++|||+. +++||||+|+||++++++.+||+
T Consensus 76 ~iv~e~~~~~~l~~~~~----------~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~~~ni~~~~~~~~kl~ 142 (288)
T cd07833 76 YLVFEYVERTLLELLEA----------SPGGLPPDAVRSYIWQLLQAIAYCHSH---NIIHRDIKPENILVSESGVLKLC 142 (288)
T ss_pred EEEEecCCCCHHHHHHh----------cCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEEE
Confidence 99999999877776654 234478999999999999999999977 89999999999999999999999
Q ss_pred ecccceecCCCCCccccccccCccCccCccccCCC-ccCCccchHHHHHHHHHHHhCCCCCccccccCchhh-hhccccC
Q 039533 784 DFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGC-EVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLH-NFGRKAL 861 (949)
Q Consensus 784 DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~-~~~~~~~ 861 (949)
|||.+.......... .....++..|+|||++.+. .++.++||||||+++|+|++|+.||......+.... .......
T Consensus 143 d~g~~~~~~~~~~~~-~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~ 221 (288)
T cd07833 143 DFGFARALRARPASP-LTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPL 221 (288)
T ss_pred eeecccccCCCcccc-ccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCC
Confidence 999998765443211 1234578899999999887 789999999999999999999999864321110000 0000000
Q ss_pred CCchhhhcc--cCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 039533 862 PDDVMDIVD--SSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVH 926 (949)
Q Consensus 862 ~~~~~~~~d--~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 926 (949)
+........ ...... +............++ ....+..+.+++.+|+..+|++||+++++++
T Consensus 222 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~--~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 284 (288)
T cd07833 222 PPSHQELFSSNPRFAGV--AFPEPSQPESLERRY--PGKVSSPALDFLKACLRMDPKERLTCDELLQ 284 (288)
T ss_pred CHHHhhhcccCcccccc--ccCCCCCcHHHHHhc--CCccchHHHHHHHHHhccCchhcccHHHHhc
Confidence 000000000 000000 000000000000000 0123677899999999999999999999875
No 300
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=100.00 E-value=1.2e-33 Score=306.62 Aligned_cols=275 Identities=25% Similarity=0.310 Sum_probs=195.8
Q ss_pred CCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCC--cchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCccce
Q 039533 627 GFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHH--GASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFKA 704 (949)
Q Consensus 627 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 704 (949)
+|+..+.||+|++|.||+|++..+++.||||+++.... .....+.+|++++++++||||+++++++.+. +..+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~-----~~~~ 75 (284)
T cd07860 1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTE-----NKLY 75 (284)
T ss_pred CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccC-----CcEE
Confidence 48889999999999999999988899999999864432 2235788999999999999999999986543 3789
Q ss_pred eEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEee
Q 039533 705 SVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVGD 784 (949)
Q Consensus 705 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~D 784 (949)
+||||+. ++|.+++... ....+++..+..++.|++.||+|||+. +++||||+|+||++++++.+||+|
T Consensus 76 ~v~e~~~-~~l~~~~~~~--------~~~~l~~~~~~~~~~~i~~~l~~lh~~---~i~H~~l~p~nill~~~~~~~l~d 143 (284)
T cd07860 76 LVFEFLH-QDLKKFMDAS--------PLSGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLAD 143 (284)
T ss_pred EEeeccc-cCHHHHHHhC--------CCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEee
Confidence 9999996 6898888621 234588999999999999999999977 899999999999999999999999
Q ss_pred cccceecCCCCCccccccccCccCccCccccCCCc-cCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhcccc-CC
Q 039533 785 FGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCE-VSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKA-LP 862 (949)
Q Consensus 785 fG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~-~~ 862 (949)
||.++........ .....++..|+|||+..+.. ++.++|||||||++|||+||+.||........ ........ .+
T Consensus 144 fg~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~-~~~~~~~~~~~ 220 (284)
T cd07860 144 FGLARAFGVPVRT--YTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQ-LFRIFRTLGTP 220 (284)
T ss_pred ccchhhcccCccc--cccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHH-HHHHHHHhCCC
Confidence 9998765433221 11234688999999887654 58899999999999999999999964321111 11000000 00
Q ss_pred Cc-hhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 039533 863 DD-VMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVH 926 (949)
Q Consensus 863 ~~-~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 926 (949)
.. ....+... +.... ...+................+.+++.+|++.||++|||++|+++
T Consensus 221 ~~~~~~~~~~~--~~~~~---~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~ 280 (284)
T cd07860 221 DEVVWPGVTSL--PDYKP---SFPKWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALA 280 (284)
T ss_pred ChhhhhhhhHH--HHHHh---hcccccccCHHHHcccCCHHHHHHHHHhcCCCcccCCCHHHHhc
Confidence 00 00000000 00000 00000000000001123456789999999999999999999975
No 301
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=100.00 E-value=1.8e-33 Score=304.93 Aligned_cols=249 Identities=22% Similarity=0.288 Sum_probs=197.6
Q ss_pred CCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCCcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCccceeE
Q 039533 627 GFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFKASV 706 (949)
Q Consensus 627 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv 706 (949)
.|...+.||+|++|.||+|.+..+++.||+|+++.......+.+.+|+.++++++||||+++++++...+ ..++|
T Consensus 20 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~-----~~~~v 94 (285)
T cd06648 20 YLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGD-----ELWVV 94 (285)
T ss_pred hhhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHcCCCChheEEEEEEcCC-----eEEEE
Confidence 3555689999999999999998889999999987555445567889999999999999999999876544 78999
Q ss_pred eeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEeecc
Q 039533 707 YEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVGDFG 786 (949)
Q Consensus 707 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~DfG 786 (949)
+||+++++|.+++.. ..+++.++..++.|++.|++|||+. +++||||+|+||+++.++.++|+|||
T Consensus 95 ~e~~~~~~L~~~~~~-----------~~~~~~~~~~~~~ql~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~d~g 160 (285)
T cd06648 95 MEFLEGGALTDIVTH-----------TRMNEEQIATVCLAVLKALSFLHAQ---GVIHRDIKSDSILLTSDGRVKLSDFG 160 (285)
T ss_pred EeccCCCCHHHHHHh-----------CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCChhhEEEcCCCcEEEcccc
Confidence 999999999999861 3478899999999999999999977 89999999999999999999999999
Q ss_pred cceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhccccCCCchh
Q 039533 787 LARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKALPDDVM 866 (949)
Q Consensus 787 ~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~ 866 (949)
.+.......... ....|+..|+|||...+..++.++|||||||++|||++|+.||...... ..........+
T Consensus 161 ~~~~~~~~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~--~~~~~~~~~~~---- 232 (285)
T cd06648 161 FCAQVSKEVPRR--KSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPL--QAMKRIRDNLP---- 232 (285)
T ss_pred cchhhccCCccc--ccccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCHH--HHHHHHHhcCC----
Confidence 887554332211 1345889999999998888999999999999999999999998532110 00000000000
Q ss_pred hhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 039533 867 DIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVH 926 (949)
Q Consensus 867 ~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 926 (949)
+... .....+..+.+++.+|++.+|++||++.|+++
T Consensus 233 ----~~~~--------------------~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~ 268 (285)
T cd06648 233 ----PKLK--------------------NLHKVSPRLRSFLDRMLVRDPAQRATAAELLN 268 (285)
T ss_pred ----CCCc--------------------ccccCCHHHHHHHHHHcccChhhCcCHHHHcc
Confidence 0000 00123456899999999999999999999985
No 302
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=100.00 E-value=1.1e-33 Score=314.13 Aligned_cols=284 Identities=19% Similarity=0.223 Sum_probs=202.2
Q ss_pred hcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCC--cchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCcc
Q 039533 625 TSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHH--GASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDF 702 (949)
Q Consensus 625 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 702 (949)
.++|++.+.||+|++|.||+|....+++.||+|++..... ...+.+.+|+.++++++||||+++++++.... .....
T Consensus 4 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~-~~~~~ 82 (334)
T cd07855 4 GSRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPG-ADFKD 82 (334)
T ss_pred hhceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccC-CCCce
Confidence 3689999999999999999999998899999999875422 33467788999999999999999998865443 23446
Q ss_pred ceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEE
Q 039533 703 KASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARV 782 (949)
Q Consensus 703 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl 782 (949)
.++||||+. ++|.+++. ....+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||
T Consensus 83 ~~lv~e~~~-~~l~~~~~----------~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~Nil~~~~~~~kl 148 (334)
T cd07855 83 VYVVMDLME-SDLHHIIH----------SDQPLTEEHIRYFLYQLLRGLKYIHSA---NVIHRDLKPSNLLVNEDCELRI 148 (334)
T ss_pred EEEEEehhh-hhHHHHhc----------cCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcEEe
Confidence 899999996 68999886 234489999999999999999999977 8999999999999999999999
Q ss_pred eecccceecCCCCCcc--ccccccCccCccCccccCC-CccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhccc
Q 039533 783 GDFGLARILSPDHTQT--SSFSVKGSLGYIAPEYGVG-CEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRK 859 (949)
Q Consensus 783 ~DfG~a~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~-~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~ 859 (949)
+|||.++......... ......|+..|+|||++.+ ..++.++|||||||++|||++|+.||....... .......
T Consensus 149 ~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~--~~~~~~~ 226 (334)
T cd07855 149 GDFGMARGLSSSPTEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVH--QLKLILS 226 (334)
T ss_pred cccccceeecccCcCCCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHH--HHHHHHH
Confidence 9999998764332211 1113458899999998765 458899999999999999999999996432110 0000000
Q ss_pred cCCCchhhhcccCCCCCchhhhhhhchhhhhhhhh-hHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 039533 860 ALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARIN-SIIECLISMVRIGVACSMELPQDRTNMTNVVH 926 (949)
Q Consensus 860 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 926 (949)
.......+..+.............. .......+. .....+..+.+++.+|++.+|++||+++|++.
T Consensus 227 ~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~ 293 (334)
T cd07855 227 VLGSPSEEVLNRIGSDRVRKYIQNL-PRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQ 293 (334)
T ss_pred HhCCChhHhhhhhchhhHHHHHhhc-ccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 0000000111000000000000000 000000000 11234677899999999999999999999887
No 303
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=100.00 E-value=1.9e-33 Score=302.28 Aligned_cols=254 Identities=22% Similarity=0.329 Sum_probs=198.1
Q ss_pred CCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCC------cchHHHHHHHHHHHhcCCCcceeEEeeeecccccCC
Q 039533 627 GFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHH------GASRSFIAECKALKSIRHRNLVKVLTACLGADYRGN 700 (949)
Q Consensus 627 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~------~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 700 (949)
+|+..+.||+|++|.||+|....+++.||+|+++.... ...+.+.+|++++++++|+||+++++++.+.+
T Consensus 1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~---- 76 (268)
T cd06630 1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDS---- 76 (268)
T ss_pred CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCC----
Confidence 47888999999999999999988899999999874331 12467889999999999999999999976544
Q ss_pred ccceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCC-c
Q 039533 701 DFKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYM-T 779 (949)
Q Consensus 701 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~-~ 779 (949)
..++||||+++++|.+++.. ...+++..+..++.|++.||+|||++ +++||||||+||+++.++ .
T Consensus 77 -~~~~v~e~~~~~~L~~~l~~----------~~~~~~~~~~~~~~ql~~al~~LH~~---~i~H~~i~~~nil~~~~~~~ 142 (268)
T cd06630 77 -HFNLFVEWMAGGSVSHLLSK----------YGAFKEAVIINYTEQLLRGLSYLHEN---QIIHRDVKGANLLIDSTGQR 142 (268)
T ss_pred -eEEEEEeccCCCcHHHHHHH----------hCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCE
Confidence 78999999999999999862 24578899999999999999999977 999999999999998775 5
Q ss_pred eEEeecccceecCCCCCcc--ccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhc
Q 039533 780 ARVGDFGLARILSPDHTQT--SSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFG 857 (949)
Q Consensus 780 ~kl~DfG~a~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~ 857 (949)
+||+|||.+.......... ......|+..|+|||++.+..++.++||||+|+++|+|++|+.||........ . ..
T Consensus 143 ~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~-~-~~- 219 (268)
T cd06630 143 LRIADFGAAARLAAKGTGAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNH-L-AL- 219 (268)
T ss_pred EEEcccccccccccccccCCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCcch-H-HH-
Confidence 9999999998765432211 11134578999999999888899999999999999999999999853211100 0 00
Q ss_pred cccCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 039533 858 RKALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVH 926 (949)
Q Consensus 858 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 926 (949)
..+.......+. ........+.+++.+|+..+|++||++.|+++
T Consensus 220 -------~~~~~~~~~~~~------------------~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~ 263 (268)
T cd06630 220 -------IFKIASATTAPS------------------IPEHLSPGLRDVTLRCLELQPEDRPPSRELLK 263 (268)
T ss_pred -------HHHHhccCCCCC------------------CchhhCHHHHHHHHHHcCCCcccCcCHHHHhc
Confidence 000000000000 01134566888999999999999999999874
No 304
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=100.00 E-value=1.4e-33 Score=306.81 Aligned_cols=244 Identities=22% Similarity=0.232 Sum_probs=196.2
Q ss_pred cCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCC---CcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCcc
Q 039533 626 SGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQH---HGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDF 702 (949)
Q Consensus 626 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 702 (949)
++|++.+.||+|++|.||+|.+..+++.||+|+++... ....+.+.+|++++++++||||+++++++.... .
T Consensus 1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-----~ 75 (290)
T cd05580 1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDS-----N 75 (290)
T ss_pred CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCC-----e
Confidence 47889999999999999999999889999999986432 233467889999999999999999999875444 7
Q ss_pred ceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEE
Q 039533 703 KASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARV 782 (949)
Q Consensus 703 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl 782 (949)
.++||||+++++|.+++. ....++...+..++.|++.||+|||+. +++||||+|+||+++.++.+||
T Consensus 76 ~~~v~e~~~~~~L~~~~~----------~~~~l~~~~~~~~~~qil~~l~~lH~~---~i~H~dl~p~nili~~~~~~kl 142 (290)
T cd05580 76 LYLVMEYVPGGELFSHLR----------KSGRFPEPVARFYAAQVVLALEYLHSL---DIVYRDLKPENLLLDSDGYIKI 142 (290)
T ss_pred EEEEEecCCCCCHHHHHH----------HcCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEECCCCCEEE
Confidence 899999999999999986 234688999999999999999999977 9999999999999999999999
Q ss_pred eecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhccccCC
Q 039533 783 GDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKALP 862 (949)
Q Consensus 783 ~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~ 862 (949)
+|||+++...... ....|++.|+|||.+.+...+.++||||||+++|+|++|+.||...... ..
T Consensus 143 ~dfg~~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~--~~--------- 206 (290)
T cd05580 143 TDFGFAKRVKGRT-----YTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNPI--QI--------- 206 (290)
T ss_pred eeCCCccccCCCC-----CCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHH--HH---------
Confidence 9999998765441 1345889999999998888899999999999999999999998633210 00
Q ss_pred CchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCC-----CHHHHH
Q 039533 863 DDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRT-----NMTNVV 925 (949)
Q Consensus 863 ~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----s~~ev~ 925 (949)
...+..... .. .......+.+++.+|+..||++|| +++|++
T Consensus 207 --~~~~~~~~~-~~-------------------~~~~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~ 252 (290)
T cd05580 207 --YEKILEGKV-RF-------------------PSFFSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIK 252 (290)
T ss_pred --HHHHhcCCc-cC-------------------CccCCHHHHHHHHHHccCCHHHccCcccCCHHHHH
Confidence 000000000 00 001245678899999999999999 555554
No 305
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=100.00 E-value=3.9e-33 Score=301.24 Aligned_cols=248 Identities=24% Similarity=0.338 Sum_probs=197.8
Q ss_pred CCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCC-CcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCcccee
Q 039533 627 GFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQH-HGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFKAS 705 (949)
Q Consensus 627 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 705 (949)
-|++.+.||+|+||.||+|.+..+++.||+|++.... ....+.+.+|+.++++++||||+++++++...+ ..++
T Consensus 5 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~-----~~~l 79 (277)
T cd06641 5 LFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDT-----KLWI 79 (277)
T ss_pred hhhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCC-----eEEE
Confidence 3677899999999999999998889999999986433 233467889999999999999999999976544 7899
Q ss_pred EeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEeec
Q 039533 706 VYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVGDF 785 (949)
Q Consensus 706 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~Df 785 (949)
||||+++++|.+++. ...+++..+..++.|++.|+.|||+. +++|+||||+||+++.++.++|+||
T Consensus 80 v~e~~~~~~l~~~i~-----------~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~Ni~i~~~~~~~l~df 145 (277)
T cd06641 80 IMEYLGGGSALDLLE-----------PGPLDETQIATILREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADF 145 (277)
T ss_pred EEEeCCCCcHHHHHh-----------cCCCCHHHHHHHHHHHHHHHHHHccC---CeecCCCCHHhEEECCCCCEEEeec
Confidence 999999999999985 23478999999999999999999977 9999999999999999999999999
Q ss_pred ccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhccccCCCch
Q 039533 786 GLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKALPDDV 865 (949)
Q Consensus 786 G~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~ 865 (949)
|.+.......... ....++..|+|||...+..++.++|||||||++|+|++|..||....... ..
T Consensus 146 g~~~~~~~~~~~~--~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~--~~----------- 210 (277)
T cd06641 146 GVAGQLTDTQIKR--NTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPMK--VL----------- 210 (277)
T ss_pred ccceecccchhhh--ccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccchHH--HH-----------
Confidence 9987664332211 12457889999999988888999999999999999999999986322110 00
Q ss_pred hhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHH
Q 039533 866 MDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHE 927 (949)
Q Consensus 866 ~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 927 (949)
..+.....+.. ....+..+.+++.+|++.+|++||++.|+++.
T Consensus 211 -~~~~~~~~~~~------------------~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~ 253 (277)
T cd06641 211 -FLIPKNNPPTL------------------EGNYSKPLKEFVEACLNKEPSFRPTAKELLKH 253 (277)
T ss_pred -HHHhcCCCCCC------------------CcccCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 00000000000 01234567889999999999999999999883
No 306
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=100.00 E-value=4.5e-34 Score=313.97 Aligned_cols=286 Identities=24% Similarity=0.257 Sum_probs=204.7
Q ss_pred CCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCC-CcchHHHHHHHHHHHhcCCCcceeEEeeeeccc-ccCCcccee
Q 039533 628 FSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQH-HGASRSFIAECKALKSIRHRNLVKVLTACLGAD-YRGNDFKAS 705 (949)
Q Consensus 628 y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~-~~~~~~~~l 705 (949)
|...+.||+|+||.||+|+++.+|+.||||.++... ....++..+|++++++++|+|||++++.-.+.. +-..+...+
T Consensus 15 W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~vl 94 (732)
T KOG4250|consen 15 WEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPVL 94 (732)
T ss_pred eeehhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccceE
Confidence 455689999999999999999999999999997543 344577889999999999999999987733221 111456789
Q ss_pred EeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeec--CCC--ceE
Q 039533 706 VYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLD--DYM--TAR 781 (949)
Q Consensus 706 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~--~~~--~~k 781 (949)
|||||.+|||+..+... +....+++.+.+.+..+++.||.|||++ +||||||||.||++- ++| ..|
T Consensus 95 vmEyC~gGsL~~~L~~P-------EN~~GLpE~e~l~lL~d~~~al~~LrEn---~IvHRDlKP~NIvl~~Gedgq~IyK 164 (732)
T KOG4250|consen 95 VMEYCSGGSLRKVLNSP-------ENAYGLPESEFLDLLSDLVSALRHLREN---GIVHRDLKPGNIVLQIGEDGQSIYK 164 (732)
T ss_pred EEeecCCCcHHHHhcCc-------ccccCCCHHHHHHHHHHHHHHHHHHHHc---CceeccCCCCcEEEeecCCCceEEe
Confidence 99999999999999732 3456799999999999999999999977 999999999999983 333 579
Q ss_pred EeecccceecCCCCCccccccccCccCccCccccCC-CccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhcccc
Q 039533 782 VGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVG-CEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKA 860 (949)
Q Consensus 782 l~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~ 860 (949)
|+|||.|+..+++... ...+||..|.+||+... ..|+..+|.|||||++|+..||..||...... .+..+.++..
T Consensus 165 LtDfG~Arel~d~s~~---~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~~~p-k~~~~~~~~~ 240 (732)
T KOG4250|consen 165 LTDFGAARELDDNSLF---TSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPFGGP-KNNKEIMWHI 240 (732)
T ss_pred eecccccccCCCCCee---eeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcCCCc-cccchhhhhh
Confidence 9999999998876633 36789999999999995 78899999999999999999999999643222 1111111111
Q ss_pred C---CCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCC--CHHHHHHHHHHhHH
Q 039533 861 L---PDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRT--NMTNVVHELQSIKN 933 (949)
Q Consensus 861 ~---~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP--s~~ev~~~L~~i~~ 933 (949)
. +..+.-..++...+... .-....+ ...........+...+..++..+|++|- ...+....+..|..
T Consensus 241 ~tkkp~~v~i~~~~~eNgpv~-~s~~lP~-----p~~Ls~~l~~~~~kwLa~~L~~~~~~~~~~~~~~~Fa~~~dIL~ 312 (732)
T KOG4250|consen 241 ITKKPSGVAIGAQEEENGPVE-WSSTLPQ-----PNHLSRGLATRLTKWLASMLEWNPRKRGHEGFDRFFAEVDDILN 312 (732)
T ss_pred hccCCCceeEeeecccCCcee-eeccCCC-----cccccHHHHhhhhHHHHHHHhhhHHHhCCCCcchHHHHHHHHHh
Confidence 1 11111111111111000 0000000 0011123344566667778888899988 77777777766644
No 307
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=100.00 E-value=3.4e-33 Score=301.84 Aligned_cols=248 Identities=22% Similarity=0.312 Sum_probs=196.5
Q ss_pred CCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCC-CcchHHHHHHHHHHHhcC---CCcceeEEeeeecccccCCcc
Q 039533 627 GFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQH-HGASRSFIAECKALKSIR---HRNLVKVLTACLGADYRGNDF 702 (949)
Q Consensus 627 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~---h~niv~~~~~~~~~~~~~~~~ 702 (949)
.|++.+.||+|+||.||+|.+..+++.||+|+++... .....++.+|+.++++++ |||++++++++.... .
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~-----~ 76 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGP-----R 76 (277)
T ss_pred hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCC-----E
Confidence 4778899999999999999998889999999987543 233467889999999996 999999999876443 7
Q ss_pred ceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEE
Q 039533 703 KASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARV 782 (949)
Q Consensus 703 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl 782 (949)
.++||||+++++|.+++.. ..+++..+..++.|++.||+|||+. +++||||+|+||++++++.++|
T Consensus 77 ~~lv~e~~~~~~L~~~~~~-----------~~l~~~~~~~i~~~i~~~l~~lh~~---~i~H~dl~p~ni~i~~~~~~~l 142 (277)
T cd06917 77 LWIIMEYAEGGSVRTLMKA-----------GPIAEKYISVIIREVLVALKYIHKV---GVIHRDIKAANILVTNTGNVKL 142 (277)
T ss_pred EEEEEecCCCCcHHHHHHc-----------cCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcCHHHEEEcCCCCEEE
Confidence 8999999999999999851 2588999999999999999999977 9999999999999999999999
Q ss_pred eecccceecCCCCCccccccccCccCccCccccCCC-ccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhccccC
Q 039533 783 GDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGC-EVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKAL 861 (949)
Q Consensus 783 ~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~ 861 (949)
+|||.+.......... ....|+..|+|||+..+. .++.++|||||||++|+|++|+.||........ ....
T Consensus 143 ~dfg~~~~~~~~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~--~~~~---- 214 (277)
T cd06917 143 CDFGVAALLNQNSSKR--STFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAFRA--MMLI---- 214 (277)
T ss_pred ccCCceeecCCCcccc--ccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChhhh--hhcc----
Confidence 9999998775543221 234588999999987654 468999999999999999999999964321100 0000
Q ss_pred CCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 039533 862 PDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVH 926 (949)
Q Consensus 862 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 926 (949)
.. ...+.+.. ...+..+.+++.+|++.||++||++.|+++
T Consensus 215 ~~----~~~~~~~~---------------------~~~~~~~~~~i~~~l~~~p~~R~~~~~il~ 254 (277)
T cd06917 215 PK----SKPPRLED---------------------NGYSKLLREFVAACLDEEPKERLSAEELLK 254 (277)
T ss_pred cc----CCCCCCCc---------------------ccCCHHHHHHHHHHcCCCcccCcCHHHHhh
Confidence 00 00000000 013456789999999999999999999976
No 308
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=100.00 E-value=5.1e-33 Score=304.99 Aligned_cols=248 Identities=26% Similarity=0.334 Sum_probs=194.2
Q ss_pred hcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCC---cchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCc
Q 039533 625 TSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHH---GASRSFIAECKALKSIRHRNLVKVLTACLGADYRGND 701 (949)
Q Consensus 625 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 701 (949)
..+|...+.||+|+||.||+|+...+++.||+|++..... ...+.+.+|+++++.++||||+++++++...+
T Consensus 14 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~----- 88 (307)
T cd06607 14 EKLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREH----- 88 (307)
T ss_pred chhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCC-----
Confidence 3568889999999999999999988899999999864332 22356889999999999999999999986544
Q ss_pred cceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceE
Q 039533 702 FKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTAR 781 (949)
Q Consensus 702 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~k 781 (949)
..++||||++ |++.+++.. ....+++..+..++.|++.||.|||+. +|+||||+|+||++++++.++
T Consensus 89 ~~~lv~e~~~-g~l~~~~~~---------~~~~l~~~~~~~~~~ql~~~L~~LH~~---~i~H~dl~p~nIl~~~~~~~k 155 (307)
T cd06607 89 TAWLVMEYCL-GSASDILEV---------HKKPLQEVEIAAICHGALQGLAYLHSH---ERIHRDIKAGNILLTEPGTVK 155 (307)
T ss_pred eEEEEHHhhC-CCHHHHHHH---------cccCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcccEEECCCCCEE
Confidence 7899999997 577776641 123588999999999999999999977 899999999999999999999
Q ss_pred EeecccceecCCCCCccccccccCccCccCccccC---CCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhcc
Q 039533 782 VGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGV---GCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGR 858 (949)
Q Consensus 782 l~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~ 858 (949)
|+|||.+....... ...++..|+|||++. ...++.++||||||+++|||++|+.||.........
T Consensus 156 L~dfg~~~~~~~~~------~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~~~------ 223 (307)
T cd06607 156 LADFGSASLVSPAN------SFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSAL------ 223 (307)
T ss_pred EeecCcceecCCCC------CccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHHHHH------
Confidence 99999997654332 234788999999874 356889999999999999999999998532111000
Q ss_pred ccCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHH
Q 039533 859 KALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHE 927 (949)
Q Consensus 859 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 927 (949)
..+..... +.. .....+..+.+++.+||+.+|++||++.+|+..
T Consensus 224 -------~~~~~~~~-~~~-----------------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 267 (307)
T cd06607 224 -------YHIAQNDS-PTL-----------------SSNDWSDYFRNFVDSCLQKIPQDRPSSEELLKH 267 (307)
T ss_pred -------HHHhcCCC-CCC-----------------CchhhCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence 00000000 000 001245568999999999999999999999874
No 309
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.7e-34 Score=298.23 Aligned_cols=248 Identities=23% Similarity=0.274 Sum_probs=198.6
Q ss_pred cCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCC---CcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCcc
Q 039533 626 SGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQH---HGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDF 702 (949)
Q Consensus 626 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 702 (949)
+.|+.-++||+||||.||-++.+.+|+.+|.|.+.+.. ........+|-.++++++.+.||.+-.+| +..+.
T Consensus 185 n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAf-----eTkd~ 259 (591)
T KOG0986|consen 185 NTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAF-----ETKDA 259 (591)
T ss_pred cceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeee-----cCCCc
Confidence 56888899999999999999999999999999885332 23345677899999999999999886664 45559
Q ss_pred ceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEE
Q 039533 703 KASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARV 782 (949)
Q Consensus 703 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl 782 (949)
.|+|+..|.||+|.-++... ..+.+++..++-++.+|+.||++||.. +||.||+||+|||+|+.|+++|
T Consensus 260 LClVLtlMNGGDLkfHiyn~--------g~~gF~e~ra~FYAAEi~cGLehlH~~---~iVYRDLKPeNILLDd~GhvRI 328 (591)
T KOG0986|consen 260 LCLVLTLMNGGDLKFHIYNH--------GNPGFDEQRARFYAAEIICGLEHLHRR---RIVYRDLKPENILLDDHGHVRI 328 (591)
T ss_pred eEEEEEeecCCceeEEeecc--------CCCCCchHHHHHHHHHHHhhHHHHHhc---ceeeccCChhheeeccCCCeEe
Confidence 99999999999999998742 235699999999999999999999977 9999999999999999999999
Q ss_pred eecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhccccCC
Q 039533 783 GDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKALP 862 (949)
Q Consensus 783 ~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~ 862 (949)
+|.|+|..+....... ..+||.+|||||++....|+...|.||+||++|||+.|+.||....+..
T Consensus 329 SDLGLAvei~~g~~~~---~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKv------------ 393 (591)
T KOG0986|consen 329 SDLGLAVEIPEGKPIR---GRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEKV------------ 393 (591)
T ss_pred eccceEEecCCCCccc---cccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhhhh------------
Confidence 9999999987766544 3479999999999999999999999999999999999999995321110
Q ss_pred CchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCH
Q 039533 863 DDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNM 921 (949)
Q Consensus 863 ~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~ 921 (949)
-.+-+|++...++.+ -.....++..++.+..++.||++|-..
T Consensus 394 --k~eEvdrr~~~~~~e---------------y~~kFS~eakslc~~LL~Kdp~~RLGc 435 (591)
T KOG0986|consen 394 --KREEVDRRTLEDPEE---------------YSDKFSEEAKSLCEGLLTKDPEKRLGC 435 (591)
T ss_pred --hHHHHHHHHhcchhh---------------cccccCHHHHHHHHHHHccCHHHhccC
Confidence 111223332222210 012334556777888889999988643
No 310
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=100.00 E-value=2.2e-33 Score=305.96 Aligned_cols=203 Identities=24% Similarity=0.340 Sum_probs=170.2
Q ss_pred hcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCC--cchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCcc
Q 039533 625 TSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHH--GASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDF 702 (949)
Q Consensus 625 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 702 (949)
.++|++.+.||+|+||.||+|.+..+++.||+|.++.... .....+.+|+.++++++||||+++++++...+ ...
T Consensus 4 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~---~~~ 80 (293)
T cd07843 4 VDEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSN---LDK 80 (293)
T ss_pred hhhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecC---CCc
Confidence 3578999999999999999999998899999999974432 22345778999999999999999999876542 247
Q ss_pred ceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEE
Q 039533 703 KASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARV 782 (949)
Q Consensus 703 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl 782 (949)
.++||||++ ++|.+++.. ....+++.+++.++.|++.||+|||+. +++||||||+||+++.++.+||
T Consensus 81 ~~lv~e~~~-~~L~~~~~~---------~~~~l~~~~~~~i~~qi~~aL~~LH~~---~i~H~dl~p~nili~~~~~~~l 147 (293)
T cd07843 81 IYMVMEYVE-HDLKSLMET---------MKQPFLQSEVKCLMLQLLSGVAHLHDN---WILHRDLKTSNLLLNNRGILKI 147 (293)
T ss_pred EEEEehhcC-cCHHHHHHh---------ccCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHHHEEECCCCcEEE
Confidence 899999997 499988862 123589999999999999999999977 8999999999999999999999
Q ss_pred eecccceecCCCCCccccccccCccCccCccccCCCc-cCCccchHHHHHHHHHHHhCCCCCcc
Q 039533 783 GDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCE-VSTNGDVYSYGILLLELVIGKKPIDI 845 (949)
Q Consensus 783 ~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~sDiwSlGvvl~elltg~~Pf~~ 845 (949)
+|||.+.......... ....++..|+|||.+.+.. ++.++||||+|+++|||++|+.||..
T Consensus 148 ~d~g~~~~~~~~~~~~--~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~ 209 (293)
T cd07843 148 CDFGLAREYGSPLKPY--TQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPG 209 (293)
T ss_pred eecCceeeccCCcccc--ccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCC
Confidence 9999998765442211 1234788999999887654 68999999999999999999999964
No 311
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=100.00 E-value=3.5e-34 Score=282.62 Aligned_cols=259 Identities=20% Similarity=0.219 Sum_probs=203.6
Q ss_pred HHhcCCCCC-CeeeeecCceEEEEEEcCCCEEEEEEEEecCCCcchHHHHHHHHHHHhc-CCCcceeEEeeeecccccCC
Q 039533 623 NATSGFSSA-NLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHGASRSFIAECKALKSI-RHRNLVKVLTACLGADYRGN 700 (949)
Q Consensus 623 ~~~~~y~~~-~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~ 700 (949)
..+++|++. ++||-|-.|.|-.+..+.+++.+|+|++.. ....++|++.--.. .|||||.+++++.. .+.+.
T Consensus 58 ~itedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~D-----s~KARrEVeLHw~~s~h~~iV~IidVyeN-s~~~r 131 (400)
T KOG0604|consen 58 SITEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLD-----SPKARREVELHWMASGHPHIVSIIDVYEN-SYQGR 131 (400)
T ss_pred cchhhheehhhhhccccCCceEEEEeccchhhhHHHHHhc-----CHHHHhHhhhhhhhcCCCceEEeehhhhh-hccCc
Confidence 346677764 689999999999999999999999999842 24566888876555 69999999999754 35677
Q ss_pred ccceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeec---CC
Q 039533 701 DFKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLD---DY 777 (949)
Q Consensus 701 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~---~~ 777 (949)
....+|||.|+||.|...++.. ....+++.++-.|+.||+.|+.|||+. +|.||||||+|+|.. .+
T Consensus 132 kcLLiVmE~meGGeLfsriq~~--------g~~afTErea~eI~~qI~~Av~~lH~~---nIAHRDlKpENLLyt~t~~n 200 (400)
T KOG0604|consen 132 KCLLIVMECMEGGELFSRIQDR--------GDQAFTEREASEIMKQIGLAVRYLHSM---NIAHRDLKPENLLYTTTSPN 200 (400)
T ss_pred eeeEeeeecccchHHHHHHHHc--------ccccchHHHHHHHHHHHHHHHHHHHhc---chhhccCChhheeeecCCCC
Confidence 7889999999999999999732 345699999999999999999999976 999999999999996 45
Q ss_pred CceEEeecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhc
Q 039533 778 MTARVGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFG 857 (949)
Q Consensus 778 ~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~ 857 (949)
-.+||+|||+|+.-....... ...-|+.|.|||++...+|+..+|+||+||++|-|++|.+||-....
T Consensus 201 a~lKLtDfGFAK~t~~~~~L~---TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg--------- 268 (400)
T KOG0604|consen 201 APLKLTDFGFAKETQEPGDLM---TPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHG--------- 268 (400)
T ss_pred cceEecccccccccCCCcccc---CCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCC---------
Confidence 579999999999755332211 23479999999999999999999999999999999999999953311
Q ss_pred cccCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 039533 858 RKALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVH 926 (949)
Q Consensus 858 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 926 (949)
..+++++...+...- -.-+ .+++.+.++...++++.++..+|.+|-|+.|++.
T Consensus 269 -~aispgMk~rI~~gq------------y~FP---~pEWs~VSe~aKdlIR~LLkt~PteRlTI~~~m~ 321 (400)
T KOG0604|consen 269 -LAISPGMKRRIRTGQ------------YEFP---EPEWSCVSEAAKDLIRKLLKTEPTERLTIEEVMD 321 (400)
T ss_pred -ccCChhHHhHhhccC------------ccCC---ChhHhHHHHHHHHHHHHHhcCCchhheeHHHhhc
Confidence 122233222221111 1111 1345577888899999999999999999999875
No 312
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=100.00 E-value=1.8e-33 Score=300.43 Aligned_cols=250 Identities=21% Similarity=0.293 Sum_probs=197.5
Q ss_pred CCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCC--CcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCccce
Q 039533 627 GFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQH--HGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFKA 704 (949)
Q Consensus 627 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 704 (949)
+|++.+.||+|+||.||+|....++..||+|.+.... ....+.+.+|++++++++|+||+++++.+...+ ..+
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~-----~~~ 75 (257)
T cd08225 1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQENG-----RLF 75 (257)
T ss_pred CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccCC-----eEE
Confidence 5788899999999999999999889999999987532 223457889999999999999999999875443 789
Q ss_pred eEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCC-ceEEe
Q 039533 705 SVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYM-TARVG 783 (949)
Q Consensus 705 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~-~~kl~ 783 (949)
+|+||+++++|.+++... ....+++..+..++.|+++|++|||+. +++||||||+||++++++ .+||+
T Consensus 76 lv~e~~~~~~L~~~~~~~--------~~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~H~dl~~~nil~~~~~~~~~l~ 144 (257)
T cd08225 76 IVMEYCDGGDLMKRINRQ--------RGVLFSEDQILSWFVQISLGLKHIHDR---KILHRDIKSQNIFLSKNGMVAKLG 144 (257)
T ss_pred EEEecCCCCcHHHHHHhc--------cCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEEcCCCCeEEec
Confidence 999999999999998631 223578999999999999999999977 899999999999999875 56999
Q ss_pred ecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhccccCCC
Q 039533 784 DFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKALPD 863 (949)
Q Consensus 784 DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~ 863 (949)
|||.+.......... ....|+..|+|||+..+..++.++||||||+++|||++|+.||...... ....
T Consensus 145 d~~~~~~~~~~~~~~--~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~-----~~~~----- 212 (257)
T cd08225 145 DFGIARQLNDSMELA--YTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNNLH-----QLVL----- 212 (257)
T ss_pred ccccchhccCCcccc--cccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCccHH-----HHHH-----
Confidence 999998765433221 1235889999999998888999999999999999999999998532111 1111
Q ss_pred chhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 039533 864 DVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVH 926 (949)
Q Consensus 864 ~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 926 (949)
........... ...+..+.+++.+|+..+|++|||+.|+++
T Consensus 213 ---~~~~~~~~~~~-------------------~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~ 253 (257)
T cd08225 213 ---KICQGYFAPIS-------------------PNFSRDLRSLISQLFKVSPRDRPSITSILK 253 (257)
T ss_pred ---HHhcccCCCCC-------------------CCCCHHHHHHHHHHhccChhhCcCHHHHhh
Confidence 11111110000 022346789999999999999999999975
No 313
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2.3e-34 Score=317.41 Aligned_cols=256 Identities=27% Similarity=0.426 Sum_probs=209.5
Q ss_pred CCCCeeeeecCceEEEEEEcCCC----EEEEEEEEecC-CCcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCccc
Q 039533 629 SSANLVGVGSFGSVYKGIIDEGR----TTIAVKVFNLQ-HHGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFK 703 (949)
Q Consensus 629 ~~~~~lg~G~~g~Vy~~~~~~~~----~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 703 (949)
...++||.|+||+||+|.+-..+ .+||+|++... ......++..|+.+|.+++|||+++++|+|.... .
T Consensus 699 kk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~------~ 772 (1177)
T KOG1025|consen 699 KKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLST------L 772 (1177)
T ss_pred hhhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccch------H
Confidence 44689999999999999995444 36899998643 3445678999999999999999999999997554 7
Q ss_pred eeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEe
Q 039533 704 ASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVG 783 (949)
Q Consensus 704 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~ 783 (949)
.+|++||+.|.|.+|++. .+..+.....+.|..|||+|+.|||.+ ++|||||-.+||||....++||.
T Consensus 773 qlvtq~mP~G~LlDyvr~---------hr~~igsq~lLnw~~QIAkgM~YLe~q---rlVHrdLaaRNVLVksP~hvkit 840 (1177)
T KOG1025|consen 773 QLVTQLMPLGCLLDYVRE---------HRDNIGSQDLLNWCYQIAKGMKYLEEQ---RLVHRDLAARNVLVKSPNHVKIT 840 (1177)
T ss_pred HHHHHhcccchHHHHHHH---------hhccccHHHHHHHHHHHHHHHHHHHhc---chhhhhhhhhheeecCCCeEEEE
Confidence 899999999999999984 345578889999999999999999977 99999999999999999999999
Q ss_pred ecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHh-CCCCCccccccCchhhhhccccCC
Q 039533 784 DFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVI-GKKPIDIMFEGDINLHNFGRKALP 862 (949)
Q Consensus 784 DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~ 862 (949)
|||+|+...++..........-.+.|||=|.+....++.++|||||||++||++| |..|++.....+
T Consensus 841 dfgla~ll~~d~~ey~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~e------------ 908 (1177)
T KOG1025|consen 841 DFGLAKLLAPDEKEYSAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAEE------------ 908 (1177)
T ss_pred ecchhhccCcccccccccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCHHH------------
Confidence 9999999887765433323334577999999999999999999999999999999 999987543221
Q ss_pred CchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHHhHHh
Q 039533 863 DDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHELQSIKNI 934 (949)
Q Consensus 863 ~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~~~ 934 (949)
+.++++. +.|.+.+.-+...+..++.+||..|++.||+++|+..++.+....
T Consensus 909 --I~dlle~------------------geRLsqPpiCtiDVy~~mvkCwmid~~~rp~fkel~~~fs~~ard 960 (1177)
T KOG1025|consen 909 --IPDLLEK------------------GERLSQPPICTIDVYMVMVKCWMIDADSRPTFKELAEEFSRMARD 960 (1177)
T ss_pred --hhHHHhc------------------cccCCCCCCccHHHHHHHHHHhccCcccCccHHHHHHHHHHHhcC
Confidence 2222211 112233346777899999999999999999999999999886543
No 314
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=100.00 E-value=4.2e-33 Score=302.59 Aligned_cols=254 Identities=23% Similarity=0.325 Sum_probs=202.7
Q ss_pred HHhcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCCcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCcc
Q 039533 623 NATSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDF 702 (949)
Q Consensus 623 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 702 (949)
..++.|++.+.||+|++|.||+|.+..++..||+|++..... ..+.+.+|++.+++++|+|++++++++...+ .
T Consensus 16 ~~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~-----~ 89 (286)
T cd06614 16 DPRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ-NKELIINEILIMKDCKHPNIVDYYDSYLVGD-----E 89 (286)
T ss_pred CccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch-hHHHHHHHHHHHHHCCCCCeeEEEEEEEECC-----E
Confidence 356678889999999999999999988889999999976544 4567889999999999999999999976554 7
Q ss_pred ceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEE
Q 039533 703 KASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARV 782 (949)
Q Consensus 703 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl 782 (949)
.++|+||+++++|.+++... ...+++..+..++.|++.||+|||+. +++|+||+|+||+++.++.++|
T Consensus 90 ~~lv~e~~~~~~L~~~l~~~---------~~~l~~~~~~~i~~~i~~~L~~lH~~---gi~H~dl~p~ni~i~~~~~~~l 157 (286)
T cd06614 90 LWVVMEYMDGGSLTDIITQN---------FVRMNEPQIAYVCREVLQGLEYLHSQ---NVIHRDIKSDNILLSKDGSVKL 157 (286)
T ss_pred EEEEEeccCCCcHHHHHHHh---------ccCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCChhhEEEcCCCCEEE
Confidence 89999999999999999721 13689999999999999999999976 9999999999999999999999
Q ss_pred eecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhccccCC
Q 039533 783 GDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKALP 862 (949)
Q Consensus 783 ~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~ 862 (949)
+|||.+......... .....++..|+|||++.+..++.++|||||||++|+|++|+.||....... ...
T Consensus 158 ~d~~~~~~~~~~~~~--~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~-~~~-------- 226 (286)
T cd06614 158 ADFGFAAQLTKEKSK--RNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLR-ALF-------- 226 (286)
T ss_pred Cccchhhhhccchhh--hccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHHH-HHH--------
Confidence 999998765433221 112347889999999988889999999999999999999999985321110 000
Q ss_pred CchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 039533 863 DDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVH 926 (949)
Q Consensus 863 ~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 926 (949)
.+....... ......++..+.+++.+|++.+|.+||++.|+++
T Consensus 227 ----~~~~~~~~~-----------------~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~ 269 (286)
T cd06614 227 ----LITTKGIPP-----------------LKNPEKWSPEFKDFLNKCLVKDPEKRPSAEELLQ 269 (286)
T ss_pred ----HHHhcCCCC-----------------CcchhhCCHHHHHHHHHHhccChhhCcCHHHHhh
Confidence 000000000 0001124556889999999999999999999976
No 315
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=100.00 E-value=3.7e-33 Score=307.67 Aligned_cols=254 Identities=22% Similarity=0.264 Sum_probs=198.6
Q ss_pred cCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCCc---chHHHHHHHHHHHhcCCCcceeEEeeeecccccCCcc
Q 039533 626 SGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHG---ASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDF 702 (949)
Q Consensus 626 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 702 (949)
++|++.+.||+|++|.||+|....+++.||+|.+...... ..+.+..|++++++++|+||+++++.+.... .
T Consensus 1 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~-----~ 75 (316)
T cd05574 1 KHFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTET-----Y 75 (316)
T ss_pred CceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCC-----E
Confidence 3688899999999999999999988999999999754322 3457889999999999999999999865443 7
Q ss_pred ceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEE
Q 039533 703 KASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARV 782 (949)
Q Consensus 703 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl 782 (949)
.++||||+.+++|.+++... ....+++..+..++.|++.||+|||+. +++||||||+||+++.++.++|
T Consensus 76 ~~lv~e~~~~~~L~~~~~~~--------~~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~l 144 (316)
T cd05574 76 LCLVMDYCPGGELFRLLQRQ--------PGKCLSEEVARFYAAEVLLALEYLHLL---GIVYRDLKPENILLHESGHIML 144 (316)
T ss_pred EEEEEEecCCCCHHHHHHhC--------CCCccCHHHHHHHHHHHHHHHHHHHHC---CeeccCCChHHeEEcCCCCEEE
Confidence 89999999999999998621 124588999999999999999999977 8999999999999999999999
Q ss_pred eecccceecCCCCCcc---------------------------ccccccCccCccCccccCCCccCCccchHHHHHHHHH
Q 039533 783 GDFGLARILSPDHTQT---------------------------SSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLE 835 (949)
Q Consensus 783 ~DfG~a~~~~~~~~~~---------------------------~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~e 835 (949)
+|||++.......... ......|+..|+|||++.+..++.++||||||+++|+
T Consensus 145 ~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~ 224 (316)
T cd05574 145 SDFDLSKQSDVEPPPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYE 224 (316)
T ss_pred eecchhhcccccccccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHH
Confidence 9999987653321100 0112357889999999998889999999999999999
Q ss_pred HHhCCCCCccccccCchhhhhccccCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCC
Q 039533 836 LVIGKKPIDIMFEGDINLHNFGRKALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELP 915 (949)
Q Consensus 836 lltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP 915 (949)
|++|+.||....... . ..++.+.... ++.....+..+.+++.+|++.||
T Consensus 225 l~~g~~pf~~~~~~~-~------------~~~~~~~~~~------------------~~~~~~~~~~~~~li~~~l~~~p 273 (316)
T cd05574 225 MLYGTTPFKGSNRDE-T------------FSNILKKEVT------------------FPGSPPVSSSARDLIRKLLVKDP 273 (316)
T ss_pred HhhCCCCCCCCchHH-H------------HHHHhcCCcc------------------CCCccccCHHHHHHHHHHccCCH
Confidence 999999996332110 0 0111111000 00001245678999999999999
Q ss_pred CCCCC----HHHHHH
Q 039533 916 QDRTN----MTNVVH 926 (949)
Q Consensus 916 ~~RPs----~~ev~~ 926 (949)
++||+ ++|++.
T Consensus 274 ~~R~s~~~~~~~ll~ 288 (316)
T cd05574 274 SKRLGSKRGAAEIKQ 288 (316)
T ss_pred hHCCCchhhHHHHHc
Confidence 99999 555555
No 316
>PHA02882 putative serine/threonine kinase; Provisional
Probab=100.00 E-value=2.7e-33 Score=304.85 Aligned_cols=264 Identities=19% Similarity=0.196 Sum_probs=185.4
Q ss_pred hcCCCCCCeeeeecCceEEEEEEcCC---CEEEEEEEEecCCCcch-----------HHHHHHHHHHHhcCCCcceeEEe
Q 039533 625 TSGFSSANLVGVGSFGSVYKGIIDEG---RTTIAVKVFNLQHHGAS-----------RSFIAECKALKSIRHRNLVKVLT 690 (949)
Q Consensus 625 ~~~y~~~~~lg~G~~g~Vy~~~~~~~---~~~vavK~~~~~~~~~~-----------~~~~~E~~~l~~l~h~niv~~~~ 690 (949)
.++|.+.++||+|+||.||+|....+ +..+|+|+......... .....+...+..+.|++++++++
T Consensus 11 ~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~ 90 (294)
T PHA02882 11 GKEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYG 90 (294)
T ss_pred CCceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEE
Confidence 36899999999999999999998766 56778887543322111 11223334455678999999998
Q ss_pred eeecccccCCccceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCC
Q 039533 691 ACLGADYRGNDFKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPS 770 (949)
Q Consensus 691 ~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~ 770 (949)
++.... ......++++|++. .++.+.+.. ....++..+..|+.|++.||+|||+. +|+||||||+
T Consensus 91 ~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~----------~~~~~~~~~~~i~~qi~~~l~~lH~~---~iiHrDiKp~ 155 (294)
T PHA02882 91 CGSFKR-CRMYYRFILLEKLV-ENTKEIFKR----------IKCKNKKLIKNIMKDMLTTLEYIHEH---GISHGDIKPE 155 (294)
T ss_pred eeeEec-CCceEEEEEEehhc-cCHHHHHHh----------hccCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHH
Confidence 765332 11223467777764 356665541 12346778899999999999999977 9999999999
Q ss_pred CeeecCCCceEEeecccceecCCCCCc-----cccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCcc
Q 039533 771 NVLLDDYMTARVGDFGLARILSPDHTQ-----TSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDI 845 (949)
Q Consensus 771 NIll~~~~~~kl~DfG~a~~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~ 845 (949)
||+++.++.++|+|||+|+.+...... .......||+.|+|||+..+..++.++|||||||++|||++|+.||..
T Consensus 156 Nill~~~~~~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~ 235 (294)
T PHA02882 156 NIMVDGNNRGYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKG 235 (294)
T ss_pred HEEEcCCCcEEEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCc
Confidence 999999999999999999876432211 111124599999999999999999999999999999999999999964
Q ss_pred ccccCchhhhhccccCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHH
Q 039533 846 MFEGDINLHNFGRKALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVV 925 (949)
Q Consensus 846 ~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~ 925 (949)
...... ...... .+.+.....+.. ....++..+.+++..|+..+|++||+++++.
T Consensus 236 ~~~~~~-~~~~~~-------~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~ 290 (294)
T PHA02882 236 FGHNGN-LIHAAK-------CDFIKRLHEGKI-----------------KIKNANKFIYDFIECVTKLSYEEKPDYDALI 290 (294)
T ss_pred cccchH-HHHHhH-------HHHHHHhhhhhh-----------------ccCCCCHHHHHHHHHHHhCCCCCCCCHHHHH
Confidence 321110 000000 000000000000 0113356788999999999999999999999
Q ss_pred HHH
Q 039533 926 HEL 928 (949)
Q Consensus 926 ~~L 928 (949)
+.+
T Consensus 291 ~~~ 293 (294)
T PHA02882 291 KIF 293 (294)
T ss_pred Hhh
Confidence 876
No 317
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=100.00 E-value=2.5e-33 Score=313.64 Aligned_cols=203 Identities=21% Similarity=0.261 Sum_probs=171.3
Q ss_pred HhcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecC--CCcchHHHHHHHHHHHhcCCCcceeEEeeeeccc-ccCC
Q 039533 624 ATSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQ--HHGASRSFIAECKALKSIRHRNLVKVLTACLGAD-YRGN 700 (949)
Q Consensus 624 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~-~~~~ 700 (949)
..++|++.+.||+|+||.||+|.+..+++.||+|++... .....+.+.+|+.++++++||||+++++++.... ..+.
T Consensus 14 ~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 93 (353)
T cd07850 14 VLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEF 93 (353)
T ss_pred hhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCcccc
Confidence 457899999999999999999999989999999998643 2233456778999999999999999999876432 2233
Q ss_pred ccceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCce
Q 039533 701 DFKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTA 780 (949)
Q Consensus 701 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~ 780 (949)
...++||||+. ++|.+++. ..++...+..++.|++.||+|||+. +|+||||||+||+++.++.+
T Consensus 94 ~~~~lv~e~~~-~~l~~~~~------------~~l~~~~~~~~~~ql~~aL~~LH~~---gi~H~dlkp~Nil~~~~~~~ 157 (353)
T cd07850 94 QDVYLVMELMD-ANLCQVIQ------------MDLDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTL 157 (353)
T ss_pred CcEEEEEeccC-CCHHHHHh------------hcCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCE
Confidence 46799999996 58888775 1278889999999999999999977 99999999999999999999
Q ss_pred EEeecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCcc
Q 039533 781 RVGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDI 845 (949)
Q Consensus 781 kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~ 845 (949)
||+|||.++....... .....++..|+|||++.+..++.++|||||||++|+|++|+.||..
T Consensus 158 kL~Dfg~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~ 219 (353)
T cd07850 158 KILDFGLARTAGTSFM---MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPG 219 (353)
T ss_pred EEccCccceeCCCCCC---CCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCC
Confidence 9999999987644322 1123578999999999998999999999999999999999999963
No 318
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=100.00 E-value=3.9e-33 Score=310.43 Aligned_cols=285 Identities=19% Similarity=0.213 Sum_probs=199.8
Q ss_pred hcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCC--CcchHHHHHHHHHHHhcCCCcceeEEeeeecccc-cCCc
Q 039533 625 TSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQH--HGASRSFIAECKALKSIRHRNLVKVLTACLGADY-RGND 701 (949)
Q Consensus 625 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~-~~~~ 701 (949)
.++|.+.+.||+|+||.||+|++..+++.||+|++.... ......+.+|++++++++||||+++++++..... ....
T Consensus 14 ~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 93 (342)
T cd07879 14 PERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQ 93 (342)
T ss_pred ccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCCCCc
Confidence 378999999999999999999998889999999986432 2223568899999999999999999998764432 1223
Q ss_pred cceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceE
Q 039533 702 FKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTAR 781 (949)
Q Consensus 702 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~k 781 (949)
..++|+||+.. ++.++.. ..+++..+..++.|++.||+|||+. +++||||||+||+++.++.+|
T Consensus 94 ~~~lv~e~~~~-~l~~~~~------------~~~~~~~~~~~~~qi~~aL~~LH~~---~i~H~dlkp~NIll~~~~~~k 157 (342)
T cd07879 94 DFYLVMPYMQT-DLQKIMG------------HPLSEDKVQYLVYQMLCGLKYIHSA---GIIHRDLKPGNLAVNEDCELK 157 (342)
T ss_pred eEEEEeccccc-CHHHHHc------------CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEE
Confidence 46899999864 6766542 2478899999999999999999977 899999999999999999999
Q ss_pred EeecccceecCCCCCccccccccCccCccCccccCC-CccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhcc--
Q 039533 782 VGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVG-CEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGR-- 858 (949)
Q Consensus 782 l~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~-- 858 (949)
|+|||+++....... ...++..|+|||++.+ ..++.++|||||||++|||++|+.||....... .+.....
T Consensus 158 L~dfg~~~~~~~~~~-----~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~-~~~~~~~~~ 231 (342)
T cd07879 158 ILDFGLARHADAEMT-----GYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLD-QLTQILKVT 231 (342)
T ss_pred EeeCCCCcCCCCCCC-----CceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHhc
Confidence 999999876432211 2347889999999876 468899999999999999999999996421110 0000000
Q ss_pred ccCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHH--HHHhHHh
Q 039533 859 KALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHE--LQSIKNI 934 (949)
Q Consensus 859 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~--L~~i~~~ 934 (949)
....+...+..+..... ........................+.+++.+|++.||++||+++|++.. ++..+..
T Consensus 232 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h~~f~~~~~~ 306 (342)
T cd07879 232 GVPGPEFVQKLEDKAAK---SYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEHPYFDSFRDA 306 (342)
T ss_pred CCCCHHHHHHhcccchH---HHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcchhhcccc
Confidence 00000011111000000 0000000000000000011234567899999999999999999999954 7776653
No 319
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=100.00 E-value=3.8e-33 Score=307.69 Aligned_cols=208 Identities=22% Similarity=0.337 Sum_probs=169.8
Q ss_pred CCCCCCeeeeecCceEEEEEEcC--CCEEEEEEEEecCC---CcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCc
Q 039533 627 GFSSANLVGVGSFGSVYKGIIDE--GRTTIAVKVFNLQH---HGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGND 701 (949)
Q Consensus 627 ~y~~~~~lg~G~~g~Vy~~~~~~--~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 701 (949)
+|++.+.||+|++|.||+|.+.. +++.||+|++.... ....+.+.+|+.++++++||||+++++++... ...
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~---~~~ 77 (316)
T cd07842 1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEH---ADK 77 (316)
T ss_pred CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCC---CCc
Confidence 47888999999999999999987 78999999997633 33446788999999999999999999998754 124
Q ss_pred cceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecC----C
Q 039533 702 FKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDD----Y 777 (949)
Q Consensus 702 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~----~ 777 (949)
..++||||+++ ++.+++..... .....++...+..++.|++.|++|||+. +|+||||||+||+++. +
T Consensus 78 ~~~lv~e~~~~-~l~~~~~~~~~-----~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~h~dlkp~Nil~~~~~~~~ 148 (316)
T cd07842 78 SVYLLFDYAEH-DLWQIIKFHRQ-----AKRVSIPPSMVKSLLWQILNGVHYLHSN---WVLHRDLKPANILVMGEGPER 148 (316)
T ss_pred eEEEEEeCCCc-CHHHHHHhhcc-----CCCcCcCHHHHHHHHHHHHHHHHHHHhC---CEeeCCCCHHHEEEcCCCCcc
Confidence 78999999975 67776642211 1124688999999999999999999977 8999999999999999 9
Q ss_pred CceEEeecccceecCCCCC-ccccccccCccCccCccccCCC-ccCCccchHHHHHHHHHHHhCCCCCccc
Q 039533 778 MTARVGDFGLARILSPDHT-QTSSFSVKGSLGYIAPEYGVGC-EVSTNGDVYSYGILLLELVIGKKPIDIM 846 (949)
Q Consensus 778 ~~~kl~DfG~a~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDiwSlGvvl~elltg~~Pf~~~ 846 (949)
+.+||+|||+++....... ........++..|+|||++.+. .++.++|||||||++|||++|++||...
T Consensus 149 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~ 219 (316)
T cd07842 149 GVVKIGDLGLARLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGR 219 (316)
T ss_pred ceEEECCCccccccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCC
Confidence 9999999999987644332 1112234578899999987764 5789999999999999999999999654
No 320
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=100.00 E-value=4.9e-33 Score=303.58 Aligned_cols=284 Identities=19% Similarity=0.192 Sum_probs=199.2
Q ss_pred cCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCC--cchHHHHHHHHHHHhcC-CCcceeEEeeeecccccCCcc
Q 039533 626 SGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHH--GASRSFIAECKALKSIR-HRNLVKVLTACLGADYRGNDF 702 (949)
Q Consensus 626 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~~~ 702 (949)
++|++.+.||+|+||.||+|.+..+++.||+|+.+.... .....+.+|+.++++++ ||||+++++++...+..+...
T Consensus 1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~ 80 (295)
T cd07837 1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPS 80 (295)
T ss_pred CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCce
Confidence 468899999999999999999998899999999864432 23467889999999995 699999999887655333445
Q ss_pred ceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecC-CCceE
Q 039533 703 KASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDD-YMTAR 781 (949)
Q Consensus 703 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~-~~~~k 781 (949)
.++||||+++ ++.+++..... .....+++..++.++.||+.||+|||+. +|+||||||+||+++. ++.+|
T Consensus 81 ~~lv~e~~~~-~l~~~~~~~~~-----~~~~~~~~~~~~~~~~qi~~~L~~LH~~---~i~H~dl~~~nil~~~~~~~~k 151 (295)
T cd07837 81 LYLVFEYLDS-DLKKFMDSNGR-----GPGRPLPAKTIKSFMYQLLKGVAHCHKH---GVMHRDLKPQNLLVDKQKGLLK 151 (295)
T ss_pred EEEEeeccCc-CHHHHHHHhcc-----cCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChHHEEEecCCCeEE
Confidence 7999999985 89888863211 1134589999999999999999999977 9999999999999998 89999
Q ss_pred EeecccceecCCCCCccccccccCccCccCccccCC-CccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhcccc
Q 039533 782 VGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVG-CEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKA 860 (949)
Q Consensus 782 l~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~ 860 (949)
|+|||.++.+....... ....+++.|+|||++.+ ..++.++||||||+++|||++|..||........ ........
T Consensus 152 l~dfg~~~~~~~~~~~~--~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~-~~~~~~~~ 228 (295)
T cd07837 152 IADLGLGRAFSIPVKSY--THEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQ-LLHIFKLL 228 (295)
T ss_pred EeecccceecCCCcccc--CCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHH-HHHHHHHh
Confidence 99999998654332211 12346888999998765 4578999999999999999999999864321110 00000000
Q ss_pred -CCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 039533 861 -LPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVH 926 (949)
Q Consensus 861 -~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 926 (949)
.+.. .... ........ ....+..+..........+..+.+++.+|++.||++||++.|++.
T Consensus 229 ~~~~~--~~~~-~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~ 290 (295)
T cd07837 229 GTPTE--QVWP-GVSKLRDW--HEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALT 290 (295)
T ss_pred CCCCh--hhCc-chhhccch--hhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhc
Confidence 0000 0000 00000000 000000000000011234567899999999999999999999875
No 321
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=100.00 E-value=3.3e-36 Score=337.84 Aligned_cols=414 Identities=30% Similarity=0.375 Sum_probs=274.0
Q ss_pred EEEEEcCCCCCCccccCCCCCCCCCceeeccCceeccccCCcccCcccCcEEeeccccccCcCCCCCCCCccceeecCCC
Q 039533 67 VTLLDLRSLKLAGSVSHFIGNLSFLKQLYLQVNSFTHEIPSEIGGLRRLKVLALNNNSICGEIPTNISRCSTLIPIHPQN 146 (949)
Q Consensus 67 v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~ 146 (949)
...||+++|.+. ..|..+..+.+|+.|+++.|.+. ..|.+.+++.+|++|.|.+|.+. ..|.++..+++|++|+++.
T Consensus 47 L~~l~lsnn~~~-~fp~~it~l~~L~~ln~s~n~i~-~vp~s~~~~~~l~~lnL~~n~l~-~lP~~~~~lknl~~LdlS~ 123 (1081)
T KOG0618|consen 47 LKSLDLSNNQIS-SFPIQITLLSHLRQLNLSRNYIR-SVPSSCSNMRNLQYLNLKNNRLQ-SLPASISELKNLQYLDLSF 123 (1081)
T ss_pred eEEeeccccccc-cCCchhhhHHHHhhcccchhhHh-hCchhhhhhhcchhheeccchhh-cCchhHHhhhcccccccch
Confidence 566777766554 66667777777777777777776 66677777777777777777776 6777777777777777777
Q ss_pred ccccccccccccCCCCCcEEECCCCCCCCCCCCCcCCCCCccEEeccccccCCCCCCcccCCCccccccccCcccccccc
Q 039533 147 NQLVGKILSRFSSLSKTEILNLGSNHLTGSIPSSLGNLSSIHTISLAYNNLDGTIPNSFGWFENLVFLSLAANNLSVVEN 226 (949)
Q Consensus 147 n~l~~~~~~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~ 226 (949)
|++. .+|..+..+..++.+..++|..... ++.. .++.++|..|.+.+.++..+..+.. .|||+.|.+..+
T Consensus 124 N~f~-~~Pl~i~~lt~~~~~~~s~N~~~~~----lg~~-~ik~~~l~~n~l~~~~~~~i~~l~~--~ldLr~N~~~~~-- 193 (1081)
T KOG0618|consen 124 NHFG-PIPLVIEVLTAEEELAASNNEKIQR----LGQT-SIKKLDLRLNVLGGSFLIDIYNLTH--QLDLRYNEMEVL-- 193 (1081)
T ss_pred hccC-CCchhHHhhhHHHHHhhhcchhhhh----hccc-cchhhhhhhhhcccchhcchhhhhe--eeecccchhhhh--
Confidence 7765 4445555566666666666622211 2222 2667777777777777777776666 678887776522
Q ss_pred cccCCCCChhhhccccccccccCCCCCCCCCCcchhccccccCcccEEEccCCCCCccCCchhhcccccccEEEccCccc
Q 039533 227 KLTGEVPSLEKLQRLQHFTITSNSLGSGGNDDLSFLCSLTNATRLTWMHINSNNFGGLLPGCISNLSKTIKTLFLNNNKI 306 (949)
Q Consensus 227 ~l~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~~~~L~~L~L~~N~l~~~~p~~~~~l~~~L~~L~L~~N~l 306 (949)
.+..+.+|+.+....|++.... -..++|+.|+.++|.++...+. ..|.+|+++++++|++
T Consensus 194 -------dls~~~~l~~l~c~rn~ls~l~----------~~g~~l~~L~a~~n~l~~~~~~---p~p~nl~~~dis~n~l 253 (1081)
T KOG0618|consen 194 -------DLSNLANLEVLHCERNQLSELE----------ISGPSLTALYADHNPLTTLDVH---PVPLNLQYLDISHNNL 253 (1081)
T ss_pred -------hhhhccchhhhhhhhcccceEE----------ecCcchheeeeccCcceeeccc---cccccceeeecchhhh
Confidence 3556667777777777665321 1235566667777766633222 1234567777777777
Q ss_pred cCCCCCCCCCCCcccEEEeecceecccCCCcccccCCCCEEecCCcccccccCcccccccccceeecccccccccCCCCC
Q 039533 307 YGSIPAGIGNFVNLQRLDMWNNQLSGTIPPAIGELQNLKILGLNRNKLSGNIPPSIGNLKMLLNLFLNDNFLEVSIPSSL 386 (949)
Q Consensus 307 ~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~ 386 (949)
+ .+|++++.+.+|+.|+..+|+|+ .+|..+...++|+.|+..+|.++ .+|+....++.|++|+|..|+|. ..|+.|
T Consensus 254 ~-~lp~wi~~~~nle~l~~n~N~l~-~lp~ri~~~~~L~~l~~~~nel~-yip~~le~~~sL~tLdL~~N~L~-~lp~~~ 329 (1081)
T KOG0618|consen 254 S-NLPEWIGACANLEALNANHNRLV-ALPLRISRITSLVSLSAAYNELE-YIPPFLEGLKSLRTLDLQSNNLP-SLPDNF 329 (1081)
T ss_pred h-cchHHHHhcccceEecccchhHH-hhHHHHhhhhhHHHHHhhhhhhh-hCCCcccccceeeeeeehhcccc-ccchHH
Confidence 6 45566777777777777777775 56666666666777777777766 56666666677777777776665 333321
Q ss_pred --------------------------CCCCCCcEEEeeCccccCCCCCcccCCcccceeeccCCCccCCCCccccccccc
Q 039533 387 --------------------------GQCESLIEINLSNNNLSGTIPPQFFSLSSLSISLDWSRNKLTGSLPIEVGKLKI 440 (949)
Q Consensus 387 --------------------------~~l~~L~~L~l~~N~l~~~~p~~~~~l~~l~~~L~ls~N~l~~~~p~~~~~l~~ 440 (949)
..++.|+.|++.+|.|+...-+.+-....| +.|+|++|+|.......+.++..
T Consensus 330 l~v~~~~l~~ln~s~n~l~~lp~~~e~~~~~Lq~LylanN~Ltd~c~p~l~~~~hL-KVLhLsyNrL~~fpas~~~kle~ 408 (1081)
T KOG0618|consen 330 LAVLNASLNTLNVSSNKLSTLPSYEENNHAALQELYLANNHLTDSCFPVLVNFKHL-KVLHLSYNRLNSFPASKLRKLEE 408 (1081)
T ss_pred HhhhhHHHHHHhhhhccccccccccchhhHHHHHHHHhcCcccccchhhhccccce-eeeeecccccccCCHHHHhchHH
Confidence 123456777777777776666666666777 67777777777444455677777
Q ss_pred cceeeeccccccccCCcccccccchhhcccCccccccccCCCcCCCCCCCEEECCCCcCCC-cCcccccCCccceEeCCC
Q 039533 441 LEFLYVYENRLEGEIPSTFGNCIRLEQLGMGGNLFQGPISSSLGSLRGLRVLDLSQNNLSG-EIPKFLAGLSLNNLNLSY 519 (949)
Q Consensus 441 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-~~p~~~~~~~L~~l~ls~ 519 (949)
|+.|+||+|+|+ .+|.++.++..|+.|...+|++. ..| .+..++.|+.+|+|.|+|+. .+|......+|++|||++
T Consensus 409 LeeL~LSGNkL~-~Lp~tva~~~~L~tL~ahsN~l~-~fP-e~~~l~qL~~lDlS~N~L~~~~l~~~~p~p~LkyLdlSG 485 (1081)
T KOG0618|consen 409 LEELNLSGNKLT-TLPDTVANLGRLHTLRAHSNQLL-SFP-ELAQLPQLKVLDLSCNNLSEVTLPEALPSPNLKYLDLSG 485 (1081)
T ss_pred hHHHhcccchhh-hhhHHHHhhhhhHHHhhcCCcee-ech-hhhhcCcceEEecccchhhhhhhhhhCCCcccceeeccC
Confidence 777777777777 67777777777777777777777 555 77778888888888888863 445444444588888888
Q ss_pred Cc
Q 039533 520 ND 521 (949)
Q Consensus 520 N~ 521 (949)
|.
T Consensus 486 N~ 487 (1081)
T KOG0618|consen 486 NT 487 (1081)
T ss_pred Cc
Confidence 76
No 322
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=100.00 E-value=8.7e-33 Score=296.42 Aligned_cols=251 Identities=20% Similarity=0.243 Sum_probs=193.2
Q ss_pred HHHHHHHhcCCCCCCee--eeecCceEEEEEEcCCCEEEEEEEEecCCCcchHHHHHHHHHHHhc-CCCcceeEEeeeec
Q 039533 618 YQDLYNATSGFSSANLV--GVGSFGSVYKGIIDEGRTTIAVKVFNLQHHGASRSFIAECKALKSI-RHRNLVKVLTACLG 694 (949)
Q Consensus 618 ~~~l~~~~~~y~~~~~l--g~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~ 694 (949)
..+.....++|.+.+.+ |+|+||.||+++...+++.+|+|++........ |+.....+ +||||+++++++..
T Consensus 6 ~~~~~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~-----e~~~~~~~~~h~~iv~~~~~~~~ 80 (267)
T PHA03390 6 LSELVQFLKNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNAI-----EPMVHQLMKDNPNFIKLYYSVTT 80 (267)
T ss_pred HHHHHHHHHhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcchh-----hHHHHHHhhcCCCEEEEEEEEec
Confidence 34555566788888877 999999999999998999999999865432211 22222222 79999999999765
Q ss_pred ccccCCccceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeee
Q 039533 695 ADYRGNDFKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLL 774 (949)
Q Consensus 695 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll 774 (949)
.+ ..++||||+++++|.+++.. ...+++.++..++.|+++|++|||+. +++||||||+||++
T Consensus 81 ~~-----~~~iv~e~~~~~~L~~~l~~----------~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~ 142 (267)
T PHA03390 81 LK-----GHVLIMDYIKDGDLFDLLKK----------EGKLSEAEVKKIIRQLVEALNDLHKH---NIIHNDIKLENVLY 142 (267)
T ss_pred CC-----eeEEEEEcCCCCcHHHHHHh----------cCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEE
Confidence 44 78999999999999999962 23689999999999999999999977 89999999999999
Q ss_pred cCCC-ceEEeecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccccccCchh
Q 039533 775 DDYM-TARVGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINL 853 (949)
Q Consensus 775 ~~~~-~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~ 853 (949)
+.++ .++|+|||.++...... ...|+..|+|||++.+..++.++||||+|+++|||++|+.||..........
T Consensus 143 ~~~~~~~~l~dfg~~~~~~~~~------~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~ 216 (267)
T PHA03390 143 DRAKDRIYLCDYGLCKIIGTPS------CYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDL 216 (267)
T ss_pred eCCCCeEEEecCccceecCCCc------cCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcchhhH
Confidence 9888 99999999998664332 2348899999999998889999999999999999999999997433222111
Q ss_pred hhhccccCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCC-HHHHHH
Q 039533 854 HNFGRKALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTN-MTNVVH 926 (949)
Q Consensus 854 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs-~~ev~~ 926 (949)
..+.... .... ......+..+.+++.+|++.+|++||+ ++|+++
T Consensus 217 ~~~~~~~---------~~~~--------------------~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~ 261 (267)
T PHA03390 217 ESLLKRQ---------QKKL--------------------PFIKNVSKNANDFVQSMLKYNINYRLTNYNEIIK 261 (267)
T ss_pred HHHHHhh---------cccC--------------------CcccccCHHHHHHHHHHhccChhhCCchHHHHhc
Confidence 1111100 0000 001134556889999999999999996 588763
No 323
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=100.00 E-value=1.4e-33 Score=301.37 Aligned_cols=248 Identities=24% Similarity=0.281 Sum_probs=197.7
Q ss_pred CCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCC---cchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCccc
Q 039533 627 GFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHH---GASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFK 703 (949)
Q Consensus 627 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 703 (949)
+|++.+.||.|+||.||+|.+..+++.||+|++..... ...+.+.+|++++++++||||+++++++.+. ...
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~~~ 75 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDE-----ENM 75 (258)
T ss_pred CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCC-----CeE
Confidence 58889999999999999999988899999999974432 3457889999999999999999999886543 479
Q ss_pred eeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEe
Q 039533 704 ASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVG 783 (949)
Q Consensus 704 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~ 783 (949)
++|+||+++++|.+++.. ...+++.++..++.|+++||+|||+. +++|+||+|+||++++++.++|+
T Consensus 76 ~lv~e~~~~~~L~~~l~~----------~~~l~~~~~~~~~~~i~~~l~~lh~~---~i~h~dl~~~nil~~~~~~~~l~ 142 (258)
T cd05578 76 YLVVDLLLGGDLRYHLSQ----------KVKFSEEQVKFWICEIVLALEYLHSK---GIIHRDIKPDNILLDEQGHVHIT 142 (258)
T ss_pred EEEEeCCCCCCHHHHHHh----------cCCcCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeEEcCCCCEEEe
Confidence 999999999999999962 24688999999999999999999977 89999999999999999999999
Q ss_pred ecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhccccCCC
Q 039533 784 DFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKALPD 863 (949)
Q Consensus 784 DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~ 863 (949)
|||.+......... ....|+..|+|||+..+..++.++|+||||+++|+|++|+.||....... ..
T Consensus 143 d~~~~~~~~~~~~~---~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~--~~--------- 208 (258)
T cd05578 143 DFNIATKVTPDTLT---TSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTI--RD--------- 208 (258)
T ss_pred ecccccccCCCccc---cccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCccH--HH---------
Confidence 99998876543221 23458889999999988889999999999999999999999986432110 00
Q ss_pred chhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCH--HHHH
Q 039533 864 DVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNM--TNVV 925 (949)
Q Consensus 864 ~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~--~ev~ 925 (949)
........... ..+...+..+.+++.+|++.||.+||++ +|++
T Consensus 209 ~~~~~~~~~~~-------------------~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~l~ 253 (258)
T cd05578 209 QIRAKQETADV-------------------LYPATWSTEAIDAINKLLERDPQKRLGDNLKDLK 253 (258)
T ss_pred HHHHHhccccc-------------------cCcccCcHHHHHHHHHHccCChhHcCCccHHHHh
Confidence 00000000000 0011234678899999999999999999 5543
No 324
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=100.00 E-value=7.6e-33 Score=294.41 Aligned_cols=250 Identities=26% Similarity=0.335 Sum_probs=201.6
Q ss_pred CCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCCcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCccceeE
Q 039533 627 GFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFKASV 706 (949)
Q Consensus 627 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv 706 (949)
+|+..+.||+|++|.||+|.+..+++.+++|++........+.+.+|++.+++++|++++++++++.... ..+++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~-----~~~l~ 75 (253)
T cd05122 1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYLKKD-----ELWIV 75 (253)
T ss_pred CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC-----eEEEE
Confidence 4788899999999999999998889999999997655445678999999999999999999999876543 78999
Q ss_pred eeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEeecc
Q 039533 707 YEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVGDFG 786 (949)
Q Consensus 707 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~DfG 786 (949)
+||+++++|.+++.. ....+++..+..++.|++.|++|||+. +++||||+|+||++++++.++|+|||
T Consensus 76 ~e~~~~~~L~~~~~~---------~~~~~~~~~~~~i~~~i~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~d~~ 143 (253)
T cd05122 76 MEFCSGGSLKDLLKS---------TNQTLTESQIAYVCKELLKGLEYLHSN---GIIHRDIKAANILLTSDGEVKLIDFG 143 (253)
T ss_pred EecCCCCcHHHHHhh---------cCCCCCHHHHHHHHHHHHHHHHHhhcC---CEecCCCCHHHEEEccCCeEEEeecc
Confidence 999999999999862 124689999999999999999999976 99999999999999999999999999
Q ss_pred cceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhccccCCCchh
Q 039533 787 LARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKALPDDVM 866 (949)
Q Consensus 787 ~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~ 866 (949)
.+........ .....++..|+|||+..+..++.++||||||+++|+|++|+.||.......... .... ....
T Consensus 144 ~~~~~~~~~~---~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~--~~~~---~~~~ 215 (253)
T cd05122 144 LSAQLSDTKA---RNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPMKALF--KIAT---NGPP 215 (253)
T ss_pred cccccccccc---ccceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchHHHHH--HHHh---cCCC
Confidence 9987665432 123458899999999988889999999999999999999999986331110000 0000 0000
Q ss_pred hhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 039533 867 DIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVH 926 (949)
Q Consensus 867 ~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 926 (949)
. . ......+..+.+++.+|++.||++|||+.|+++
T Consensus 216 ~-----~--------------------~~~~~~~~~~~~~i~~~l~~~p~~R~t~~~~l~ 250 (253)
T cd05122 216 G-----L--------------------RNPEKWSDEFKDFLKKCLQKNPEKRPTAEQLLK 250 (253)
T ss_pred C-----c--------------------CcccccCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 0 0 000112456889999999999999999999875
No 325
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=100.00 E-value=7.6e-33 Score=304.42 Aligned_cols=210 Identities=22% Similarity=0.324 Sum_probs=170.4
Q ss_pred HhcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCC--cchHHHHHHHHHHHhcCCCcceeEEeeeeccccc---
Q 039533 624 ATSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHH--GASRSFIAECKALKSIRHRNLVKVLTACLGADYR--- 698 (949)
Q Consensus 624 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~--- 698 (949)
..++|++.+.||+|+||.||+|....+++.||||++..... .....+.+|++++++++||||+++++++...+..
T Consensus 10 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 89 (310)
T cd07865 10 EVSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNR 89 (310)
T ss_pred hhhheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccC
Confidence 34679999999999999999999998899999999864432 2234567899999999999999999998654321
Q ss_pred CCccceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCC
Q 039533 699 GNDFKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYM 778 (949)
Q Consensus 699 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~ 778 (949)
.....++||||+. +++.+++.. ....+++.++..++.|++.||+|||++ +++||||||+||+++.++
T Consensus 90 ~~~~~~lv~e~~~-~~l~~~l~~---------~~~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dl~p~nil~~~~~ 156 (310)
T cd07865 90 YKGSFYLVFEFCE-HDLAGLLSN---------KNVKFTLSEIKKVMKMLLNGLYYIHRN---KILHRDMKAANILITKDG 156 (310)
T ss_pred CCceEEEEEcCCC-cCHHHHHHh---------cccCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEECCCC
Confidence 2235699999996 488887752 223589999999999999999999977 899999999999999999
Q ss_pred ceEEeecccceecCCCCCc--cccccccCccCccCccccCCC-ccCCccchHHHHHHHHHHHhCCCCCccc
Q 039533 779 TARVGDFGLARILSPDHTQ--TSSFSVKGSLGYIAPEYGVGC-EVSTNGDVYSYGILLLELVIGKKPIDIM 846 (949)
Q Consensus 779 ~~kl~DfG~a~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~-~~~~~sDiwSlGvvl~elltg~~Pf~~~ 846 (949)
.+||+|||.+......... .......++..|+|||++.+. .++.++||||||+++|||++|+.||...
T Consensus 157 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~ 227 (310)
T cd07865 157 ILKLADFGLARAFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGN 227 (310)
T ss_pred cEEECcCCCcccccCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCC
Confidence 9999999999866433221 111133478899999987765 3688999999999999999999998643
No 326
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=100.00 E-value=4.3e-33 Score=302.10 Aligned_cols=274 Identities=24% Similarity=0.291 Sum_probs=195.8
Q ss_pred CCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCC--CcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCcccee
Q 039533 628 FSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQH--HGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFKAS 705 (949)
Q Consensus 628 y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 705 (949)
|++.+.||.|++|.||+|.+..+++.||+|++.... ......+.+|++++++++|||++++++++...+ ..++
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~-----~~~i 75 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSEN-----KLYL 75 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccCC-----eEEE
Confidence 677899999999999999998889999999987543 223357889999999999999999999976543 7899
Q ss_pred EeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEeec
Q 039533 706 VYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVGDF 785 (949)
Q Consensus 706 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~Df 785 (949)
||||++ ++|.+++... ....+++..+..++.|+++||+|||+. +++||||+|+||+++.++.++|+||
T Consensus 76 v~e~~~-~~l~~~~~~~--------~~~~~~~~~~~~~~~~i~~~L~~lH~~---~~~H~dl~p~nil~~~~~~~~l~df 143 (283)
T cd07835 76 VFEFLD-LDLKKYMDSS--------PLTGLDPPLIKSYLYQLLQGIAYCHSH---RVLHRDLKPQNLLIDREGALKLADF 143 (283)
T ss_pred EEeccC-cCHHHHHhhC--------CCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCHHHEEEcCCCcEEEeec
Confidence 999995 6899998621 113589999999999999999999977 8999999999999999999999999
Q ss_pred ccceecCCCCCccccccccCccCccCccccCCC-ccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhccccC-CC
Q 039533 786 GLARILSPDHTQTSSFSVKGSLGYIAPEYGVGC-EVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKAL-PD 863 (949)
Q Consensus 786 G~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~-~~ 863 (949)
|.++......... ....++..|+|||++.+. .++.++||||||+++|||++|+.||....... ......+... +.
T Consensus 144 ~~~~~~~~~~~~~--~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~-~~~~~~~~~~~~~ 220 (283)
T cd07835 144 GLARAFGVPVRTY--THEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEID-QLFRIFRTLGTPD 220 (283)
T ss_pred ccccccCCCcccc--CccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHhCCCC
Confidence 9997654322111 123468899999987664 46899999999999999999999996432211 0111111000 00
Q ss_pred c-hhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 039533 864 D-VMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVH 926 (949)
Q Consensus 864 ~-~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 926 (949)
. ...... ..++.......... ..........+..+.+++.+|++.+|++|||++|+++
T Consensus 221 ~~~~~~~~--~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~ 279 (283)
T cd07835 221 EDVWPGVT--SLPDYKPTFPKWAR---QDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQ 279 (283)
T ss_pred hHHhhhhh--hchhhhhhcccccc---cchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence 0 000000 00000000000000 0000001123457889999999999999999999975
No 327
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=100.00 E-value=6e-33 Score=299.75 Aligned_cols=243 Identities=22% Similarity=0.241 Sum_probs=184.0
Q ss_pred eeeeecCceEEEEEEcCCCEEEEEEEEecCCC---cchHHHHHHHHHHHh---cCCCcceeEEeeeecccccCCccceeE
Q 039533 633 LVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHH---GASRSFIAECKALKS---IRHRNLVKVLTACLGADYRGNDFKASV 706 (949)
Q Consensus 633 ~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~---l~h~niv~~~~~~~~~~~~~~~~~~lv 706 (949)
.||+|+||.||+|.+..+++.||+|.+..... .....+.+|..+++. .+||+|+.+++++...+ ..++|
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-----~~~lv 75 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPD-----KLCFI 75 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCC-----eEEEE
Confidence 48999999999999988899999999864322 112334455544443 37999999998875443 78999
Q ss_pred eeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEeecc
Q 039533 707 YEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVGDFG 786 (949)
Q Consensus 707 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~DfG 786 (949)
|||+++++|.+++. ....+++..+..++.|++.||+|||+. +|+||||||+||++++++.++|+|||
T Consensus 76 ~e~~~~~~L~~~i~----------~~~~l~~~~~~~i~~qi~~al~~lH~~---~ivH~dikp~Nil~~~~~~~~l~dfg 142 (279)
T cd05633 76 LDLMNGGDLHYHLS----------QHGVFSEKEMRFYATEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLG 142 (279)
T ss_pred EecCCCCCHHHHHH----------hcCCCCHHHHHHHHHHHHHHHHHHHHC---CcCCCCCCHHHEEECCCCCEEEccCC
Confidence 99999999999886 234589999999999999999999977 89999999999999999999999999
Q ss_pred cceecCCCCCccccccccCccCccCccccC-CCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhccccCCCch
Q 039533 787 LARILSPDHTQTSSFSVKGSLGYIAPEYGV-GCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKALPDDV 865 (949)
Q Consensus 787 ~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~ 865 (949)
++........ ....|+..|+|||... +..++.++||||+||++|||++|+.||................
T Consensus 143 ~~~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~------ 212 (279)
T cd05633 143 LACDFSKKKP----HASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTL------ 212 (279)
T ss_pred cceeccccCc----cCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHHHHHHHhh------
Confidence 9876543222 1235899999999886 4568899999999999999999999996432111000000000
Q ss_pred hhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCC-----CHHHHHHH
Q 039533 866 MDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRT-----NMTNVVHE 927 (949)
Q Consensus 866 ~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----s~~ev~~~ 927 (949)
.....+ ....+..+.+++.+|+..||++|| |++|+++.
T Consensus 213 --~~~~~~----------------------~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~h 255 (279)
T cd05633 213 --TVNVEL----------------------PDSFSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKEH 255 (279)
T ss_pred --cCCcCC----------------------ccccCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHhC
Confidence 000000 112345678999999999999999 59888774
No 328
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=100.00 E-value=7.2e-33 Score=300.49 Aligned_cols=276 Identities=20% Similarity=0.273 Sum_probs=199.0
Q ss_pred CCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCC-cchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCcccee
Q 039533 627 GFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHH-GASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFKAS 705 (949)
Q Consensus 627 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 705 (949)
+|++.+.||.|++|.||+|++..+++.||||+++.... ...+.+.+|++++++++|+||+++++++...+ ..++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-----~~~l 75 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIHTEN-----KLML 75 (284)
T ss_pred CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCC-----cEEE
Confidence 58889999999999999999998899999999975433 23466788999999999999999999976554 7899
Q ss_pred EeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEeec
Q 039533 706 VYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVGDF 785 (949)
Q Consensus 706 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~Df 785 (949)
||||+++ +|.+++.... ....+++..+..++.|++.||+|||+. +++||||||+||++++++.++|+||
T Consensus 76 v~e~~~~-~l~~~~~~~~-------~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~h~dl~p~ni~~~~~~~~~l~d~ 144 (284)
T cd07836 76 VFEYMDK-DLKKYMDTHG-------VRGALDPNTVKSFTYQLLKGIAFCHEN---RVLHRDLKPQNLLINKRGELKLADF 144 (284)
T ss_pred EEecCCc-cHHHHHHhcC-------CCCCcCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEECCCCcEEEeec
Confidence 9999985 8888876221 124589999999999999999999977 8999999999999999999999999
Q ss_pred ccceecCCCCCccccccccCccCccCccccCCC-ccCCccchHHHHHHHHHHHhCCCCCccccccCc--hhhhhccccCC
Q 039533 786 GLARILSPDHTQTSSFSVKGSLGYIAPEYGVGC-EVSTNGDVYSYGILLLELVIGKKPIDIMFEGDI--NLHNFGRKALP 862 (949)
Q Consensus 786 G~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~--~~~~~~~~~~~ 862 (949)
|.+......... .....++..|+|||++.+. .++.++|||||||++|||++|+.||......+. ...........
T Consensus 145 g~~~~~~~~~~~--~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (284)
T cd07836 145 GLARAFGIPVNT--FSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGTPTE 222 (284)
T ss_pred chhhhhcCCccc--cccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCh
Confidence 999765432211 1123478899999987664 468999999999999999999999964322110 00000000001
Q ss_pred CchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 039533 863 DDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVH 926 (949)
Q Consensus 863 ~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 926 (949)
.....+.+. +...... ...............+..+.+++.+|++.||++||+++|+++
T Consensus 223 ~~~~~~~~~---~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~ 280 (284)
T cd07836 223 STWPGISQL---PEYKPTF---PRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQ 280 (284)
T ss_pred hhHHHHhcC---chhcccc---cCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 001111100 0000000 000000000111234567889999999999999999999875
No 329
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=100.00 E-value=4.4e-33 Score=309.05 Aligned_cols=290 Identities=19% Similarity=0.222 Sum_probs=208.4
Q ss_pred CCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCC--CcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCccce
Q 039533 627 GFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQH--HGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFKA 704 (949)
Q Consensus 627 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 704 (949)
+|++.+.||.|++|.||+|+...+++.||+|++.... ....+.+.+|+.++++++|+||+++++++...........+
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVY 80 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceE
Confidence 5888999999999999999998889999999987543 33456889999999999999999999987655433344689
Q ss_pred eEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEee
Q 039533 705 SVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVGD 784 (949)
Q Consensus 705 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~D 784 (949)
+||||++ ++|.+++. ....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.++|+|
T Consensus 81 lv~e~~~-~~l~~~l~----------~~~~l~~~~~~~i~~~l~~~l~~LH~~---gi~H~dlkp~nili~~~~~~~L~d 146 (330)
T cd07834 81 IVTELME-TDLHKVIK----------SPQPLTDDHIQYFLYQILRGLKYLHSA---NVIHRDLKPSNILVNSNCDLKICD 146 (330)
T ss_pred EEecchh-hhHHHHHh----------CCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEcc
Confidence 9999997 48988886 223689999999999999999999977 899999999999999999999999
Q ss_pred cccceecCCCCCc-cccccccCccCccCccccCCC-ccCCccchHHHHHHHHHHHhCCCCCccccccCc--hhhhhcccc
Q 039533 785 FGLARILSPDHTQ-TSSFSVKGSLGYIAPEYGVGC-EVSTNGDVYSYGILLLELVIGKKPIDIMFEGDI--NLHNFGRKA 860 (949)
Q Consensus 785 fG~a~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~-~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~--~~~~~~~~~ 860 (949)
||.+......... .......++..|+|||++.+. .++.++||||||+++|+|++|+.||........ .........
T Consensus 147 fg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~ 226 (330)
T cd07834 147 FGLARGVDPDEDEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQLNLIVEVLGTP 226 (330)
T ss_pred cCceEeecccccccccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHhcCCC
Confidence 9999887654310 111234578899999999887 789999999999999999999999964422110 000000000
Q ss_pred CCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHH--HHHhHHh
Q 039533 861 LPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHE--LQSIKNI 934 (949)
Q Consensus 861 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~--L~~i~~~ 934 (949)
.++.... .. .....+.+................+.+..+.+++.+||+.+|++||+++++++. +++++..
T Consensus 227 ~~~~~~~-~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~~~~ 298 (330)
T cd07834 227 SEEDLKF-IT---SEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAHPYLAQLHDP 298 (330)
T ss_pred ChhHhhh-cc---ccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhCccHHhhccc
Confidence 0000000 00 000000000000000000001112345678999999999999999999999974 6555443
No 330
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=100.00 E-value=1.1e-32 Score=294.52 Aligned_cols=254 Identities=25% Similarity=0.318 Sum_probs=202.9
Q ss_pred CCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCC--cchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCccce
Q 039533 627 GFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHH--GASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFKA 704 (949)
Q Consensus 627 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 704 (949)
+|+..+.||+|++|.||+|.+..+++.|++|++..... ...+.+.+|++.+++++||||+++++.+.... ....+
T Consensus 1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~---~~~~~ 77 (260)
T cd06606 1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEE---KNTLN 77 (260)
T ss_pred CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCC---CCeEE
Confidence 47888999999999999999998899999999875543 34578899999999999999999999876541 24789
Q ss_pred eEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEee
Q 039533 705 SVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVGD 784 (949)
Q Consensus 705 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~D 784 (949)
+|+||+++++|.+++.. ...+++.++..++.|+++|++|||+. +++||||+|+||+++.++.++|+|
T Consensus 78 lv~e~~~~~~L~~~~~~----------~~~~~~~~~~~~~~~l~~~l~~lh~~---~~~h~dl~p~ni~i~~~~~~~l~d 144 (260)
T cd06606 78 IFLEYVSGGSLSSLLKK----------FGKLPEPVIRKYTRQILEGLAYLHSN---GIVHRDIKGANILVDSDGVVKLAD 144 (260)
T ss_pred EEEEecCCCcHHHHHHH----------cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEcCCCCEEEcc
Confidence 99999999999999862 23689999999999999999999976 899999999999999999999999
Q ss_pred cccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhccccCCCc
Q 039533 785 FGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKALPDD 864 (949)
Q Consensus 785 fG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~ 864 (949)
||.+................++..|+|||...+...+.++||||||+++|+|++|..||....... ..
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~----~~-------- 212 (260)
T cd06606 145 FGCAKRLGDIETGEGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGNPM----AA-------- 212 (260)
T ss_pred cccEEecccccccccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchH----HH--------
Confidence 999987765543111223458899999999988889999999999999999999999986432000 00
Q ss_pred hhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 039533 865 VMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVH 926 (949)
Q Consensus 865 ~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 926 (949)
............ .....+..+.+++.+|++.+|++||++.|+++
T Consensus 213 ~~~~~~~~~~~~------------------~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~ 256 (260)
T cd06606 213 LYKIGSSGEPPE------------------IPEHLSEEAKDFLRKCLRRDPKKRPTADELLQ 256 (260)
T ss_pred HHhccccCCCcC------------------CCcccCHHHHHHHHHhCcCChhhCCCHHHHhh
Confidence 000000000000 00122567889999999999999999999975
No 331
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=5.4e-34 Score=328.71 Aligned_cols=258 Identities=24% Similarity=0.318 Sum_probs=188.2
Q ss_pred hcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCC-CcchHHHHHHHHHHHhcCCCcceeEEeeeecccccC----
Q 039533 625 TSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQH-HGASRSFIAECKALKSIRHRNLVKVLTACLGADYRG---- 699 (949)
Q Consensus 625 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~---- 699 (949)
..+|...+.||+||||.||+++.+-+|+.+|||++.... ........+|+..+++++|||||+++..+.+...+.
T Consensus 478 ~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~~~e 557 (1351)
T KOG1035|consen 478 LNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELTVLE 557 (1351)
T ss_pred hhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCcccccc
Confidence 456777899999999999999999999999999997543 233457889999999999999999995443221000
Q ss_pred --------------------------------------------------------------------------------
Q 039533 700 -------------------------------------------------------------------------------- 699 (949)
Q Consensus 700 -------------------------------------------------------------------------------- 699 (949)
T Consensus 558 i~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS~~e 637 (1351)
T KOG1035|consen 558 IVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTSDSE 637 (1351)
T ss_pred ccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCcccccccccccccccccccC
Confidence
Q ss_pred ----------------------C--------ccceeEeeeccCCChhhhcCCCCCCCccccCCCCC-CHHHHHHHHHHHH
Q 039533 700 ----------------------N--------DFKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNL-NLLQRLNIAIDIA 748 (949)
Q Consensus 700 ----------------------~--------~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l-~~~~~~~i~~qi~ 748 (949)
+ ...||=||||+.-++++++... ... .....++++++|+
T Consensus 638 ~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N----------~~~~~~d~~wrLFreIl 707 (1351)
T KOG1035|consen 638 GSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRN----------HFNSQRDEAWRLFREIL 707 (1351)
T ss_pred CccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhc----------ccchhhHHHHHHHHHHH
Confidence 0 1246677888877777777521 111 3567889999999
Q ss_pred HHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEeecccceecC----------------CCCCccccccccCccCccCc
Q 039533 749 YALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVGDFGLARILS----------------PDHTQTSSFSVKGSLGYIAP 812 (949)
Q Consensus 749 ~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~----------------~~~~~~~~~~~~gt~~y~aP 812 (949)
+||+|+|++ |||||||||.||++|++..+||+|||+|+... ........+..+||.-|+||
T Consensus 708 EGLaYIH~~---giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAP 784 (1351)
T KOG1035|consen 708 EGLAYIHDQ---GIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAP 784 (1351)
T ss_pred HHHHHHHhC---ceeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecH
Confidence 999999977 89999999999999999999999999998721 00011123356799999999
Q ss_pred cccCCC---ccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhccccCCCchhhhcccCCCCCchhhhhhhchhhh
Q 039533 813 EYGVGC---EVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKALPDDVMDIVDSSLLPDDEDLILTGNQRQK 889 (949)
Q Consensus 813 E~~~~~---~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ 889 (949)
|++.+. .|+.|+|+||+|||++||+. ||....+....+.......+|.. .++.+
T Consensus 785 Ell~~~~~~~Yn~KiDmYSLGIVlFEM~y---PF~TsMERa~iL~~LR~g~iP~~-~~f~~------------------- 841 (1351)
T KOG1035|consen 785 ELLSDTSSNKYNSKIDMYSLGIVLFEMLY---PFGTSMERASILTNLRKGSIPEP-ADFFD------------------- 841 (1351)
T ss_pred HHhcccccccccchhhhHHHHHHHHHHhc---cCCchHHHHHHHHhcccCCCCCC-ccccc-------------------
Confidence 998765 49999999999999999996 57644332222222111112221 11111
Q ss_pred hhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 039533 890 QARINSIIECLISMVRIGVACSMELPQDRTNMTNVVH 926 (949)
Q Consensus 890 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 926 (949)
...+.=.+++.++++.||.+||||.|++.
T Consensus 842 --------~~~~~e~slI~~Ll~hdP~kRPtA~eLL~ 870 (1351)
T KOG1035|consen 842 --------PEHPEEASLIRWLLSHDPSKRPTATELLN 870 (1351)
T ss_pred --------ccchHHHHHHHHHhcCCCccCCCHHHHhh
Confidence 11223367899999999999999999874
No 332
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=100.00 E-value=7.3e-33 Score=300.12 Aligned_cols=272 Identities=18% Similarity=0.189 Sum_probs=194.0
Q ss_pred CCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCC-cchHHHHHHHHHHHhcC-CCcceeEEeeeecccccCCcccee
Q 039533 628 FSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHH-GASRSFIAECKALKSIR-HRNLVKVLTACLGADYRGNDFKAS 705 (949)
Q Consensus 628 y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~~~~~l 705 (949)
|++.+.||+|+||.||+|+...+++.||+|+++.... .......+|+..+.++. |+|++++++++.+.. .+..++
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~---~~~~~l 77 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRK---TGRLAL 77 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCC---CCcEEE
Confidence 6778899999999999999988899999999875422 22234557888999885 999999999986541 237899
Q ss_pred EeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEeec
Q 039533 706 VYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVGDF 785 (949)
Q Consensus 706 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~Df 785 (949)
||||++ +++.+++.. ....+++.++..++.|++.||+|||+. +++||||||+||+++. +.+||+||
T Consensus 78 v~e~~~-~~l~~~l~~---------~~~~~~~~~~~~~~~qi~~~L~~LH~~---~i~H~dl~p~ni~l~~-~~~kl~df 143 (282)
T cd07831 78 VFELMD-MNLYELIKG---------RKRPLPEKRVKSYMYQLLKSLDHMHRN---GIFHRDIKPENILIKD-DILKLADF 143 (282)
T ss_pred EEecCC-ccHHHHHHh---------ccCCCCHHHHHHHHHHHHHHHHHHHHC---CceecccCHHHEEEcC-CCeEEEec
Confidence 999997 588888752 124589999999999999999999977 8999999999999999 99999999
Q ss_pred ccceecCCCCCccccccccCccCccCccccCC-CccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhccccCCC-
Q 039533 786 GLARILSPDHTQTSSFSVKGSLGYIAPEYGVG-CEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKALPD- 863 (949)
Q Consensus 786 G~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~- 863 (949)
|.++......... ...++..|+|||++.. ..++.++||||+||++|||++|+.||......+ ...........
T Consensus 144 g~~~~~~~~~~~~---~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~--~~~~~~~~~~~~ 218 (282)
T cd07831 144 GSCRGIYSKPPYT---EYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELD--QIAKIHDVLGTP 218 (282)
T ss_pred ccccccccCCCcC---CCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHH--HHHHHHHHcCCC
Confidence 9998764433221 2347889999997654 457899999999999999999999996432111 11111111110
Q ss_pred --chhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 039533 864 --DVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVH 926 (949)
Q Consensus 864 --~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 926 (949)
.+............. ................+..+.+++.+|++.+|++||+++|+++
T Consensus 219 ~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~ 278 (282)
T cd07831 219 DAEVLKKFRKSRHMNYN-----FPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALR 278 (282)
T ss_pred CHHHHHhhccccccccc-----CcccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhh
Confidence 010000000000000 0000000000111244678999999999999999999999975
No 333
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=100.00 E-value=3.2e-33 Score=310.83 Aligned_cols=282 Identities=21% Similarity=0.269 Sum_probs=199.1
Q ss_pred HhcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecC--CCcchHHHHHHHHHHHhc-CCCcceeEEeeeecccccCC
Q 039533 624 ATSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQ--HHGASRSFIAECKALKSI-RHRNLVKVLTACLGADYRGN 700 (949)
Q Consensus 624 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~ 700 (949)
..++|++.+.||+|+||.||+|.+..+++.||+|++... .......+.+|+.+++++ +||||+++++++...+ .
T Consensus 5 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~---~ 81 (337)
T cd07852 5 ILRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAEN---D 81 (337)
T ss_pred hhhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCC---C
Confidence 356789999999999999999999888999999988532 222335677899999999 9999999999875422 3
Q ss_pred ccceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCce
Q 039533 701 DFKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTA 780 (949)
Q Consensus 701 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~ 780 (949)
...++||||++ ++|.+++.. ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+
T Consensus 82 ~~~~lv~e~~~-~~L~~~~~~-----------~~~~~~~~~~i~~qi~~~L~~LH~~---~i~H~dl~p~nill~~~~~~ 146 (337)
T cd07852 82 KDIYLVFEYME-TDLHAVIRA-----------NILEDVHKRYIMYQLLKALKYIHSG---NVIHRDLKPSNILLNSDCRV 146 (337)
T ss_pred ceEEEEecccc-cCHHHHHhc-----------CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcE
Confidence 35799999997 599988851 2578889999999999999999977 99999999999999999999
Q ss_pred EEeecccceecCCCCCc---cccccccCccCccCccccCC-CccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhh
Q 039533 781 RVGDFGLARILSPDHTQ---TSSFSVKGSLGYIAPEYGVG-CEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNF 856 (949)
Q Consensus 781 kl~DfG~a~~~~~~~~~---~~~~~~~gt~~y~aPE~~~~-~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~ 856 (949)
||+|||.++........ .......|+..|+|||++.+ ..++.++||||||+++|||++|+.||........ ....
T Consensus 147 kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~-~~~~ 225 (337)
T cd07852 147 KLADFGLARSLSELEENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQ-LEKI 225 (337)
T ss_pred EEeeccchhccccccccccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHHH-HHHH
Confidence 99999999866443221 12223458999999998765 4578999999999999999999999964322110 0000
Q ss_pred c--cccCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHH
Q 039533 857 G--RKALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHE 927 (949)
Q Consensus 857 ~--~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 927 (949)
. ...........+.... ..+....................+..+.+++.+|++.+|++|||+.++++.
T Consensus 226 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~ 295 (337)
T cd07852 226 IEVIGPPSAEDIESIKSPF---AATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEH 295 (337)
T ss_pred HHHhCCCCHHHHHHHHhhh---HHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhhC
Confidence 0 0000000000000000 000000000000000000111245678999999999999999999999974
No 334
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=100.00 E-value=2.7e-33 Score=304.47 Aligned_cols=258 Identities=23% Similarity=0.265 Sum_probs=192.1
Q ss_pred CCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCC-cchHHHHHHHHHHHhcC-CCcceeEEeeeecccccCCccce
Q 039533 627 GFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHH-GASRSFIAECKALKSIR-HRNLVKVLTACLGADYRGNDFKA 704 (949)
Q Consensus 627 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~~~~~ 704 (949)
+|...+.||+|+||.||++.+..+++.||+|.+..... .....+.+|+.++.++. |+||+++++++.... ..+
T Consensus 5 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~-----~~~ 79 (288)
T cd06616 5 DLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREG-----DCW 79 (288)
T ss_pred HhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCC-----cEE
Confidence 45667899999999999999998899999999875432 33467889999999996 999999999876443 678
Q ss_pred eEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEee
Q 039533 705 SVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVGD 784 (949)
Q Consensus 705 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~D 784 (949)
++|||+.. ++.++..... ......+++..+..++.|++.||+|||+.. +++||||||+||+++.++.+||+|
T Consensus 80 ~~~e~~~~-~l~~l~~~~~-----~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~--~i~H~dlkp~Nil~~~~~~~kl~d 151 (288)
T cd06616 80 ICMELMDI-SLDKFYKYVY-----EVLKSVIPEEILGKIAVATVKALNYLKEEL--KIIHRDVKPSNILLDRNGNIKLCD 151 (288)
T ss_pred EEEecccC-CHHHHHHHHH-----HhhcCCCCHHHHHHHHHHHHHHHHHHhhcC--CeeccCCCHHHEEEccCCcEEEee
Confidence 99999864 5544332100 012356899999999999999999999643 899999999999999999999999
Q ss_pred cccceecCCCCCccccccccCccCccCccccCCC---ccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhccccC
Q 039533 785 FGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGC---EVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKAL 861 (949)
Q Consensus 785 fG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~ 861 (949)
||+++......... ...|+..|+|||++.+. .++.++|||||||++|||++|+.||..... .........
T Consensus 152 fg~~~~~~~~~~~~---~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~----~~~~~~~~~ 224 (288)
T cd06616 152 FGISGQLVDSIAKT---RDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWNS----VFDQLTQVV 224 (288)
T ss_pred cchhHHhccCCccc---cccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcch----HHHHHhhhc
Confidence 99997654332211 23488999999998776 688999999999999999999999863321 000000000
Q ss_pred CCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHH
Q 039533 862 PDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHE 927 (949)
Q Consensus 862 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 927 (949)
.... +.+... .....+..+.+++.+|++.+|++|||+.||++.
T Consensus 225 ~~~~-----~~~~~~------------------~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~~ 267 (288)
T cd06616 225 KGDP-----PILSNS------------------EEREFSPSFVNFINLCLIKDESKRPKYKELLEH 267 (288)
T ss_pred CCCC-----CcCCCc------------------CCCccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0000 000000 001245578999999999999999999999864
No 335
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=100.00 E-value=1e-32 Score=299.84 Aligned_cols=276 Identities=21% Similarity=0.255 Sum_probs=199.0
Q ss_pred CCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCC--CcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCcccee
Q 039533 628 FSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQH--HGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFKAS 705 (949)
Q Consensus 628 y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 705 (949)
|++.+.||+|++|.||+|+...+++.+|+|++.... ......+.+|++++++++|+|++++++++...+ ....++
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~---~~~~~l 77 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKG---KGSIYM 77 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCC---CCcEEE
Confidence 677899999999999999999889999999998653 333467889999999999999999999976541 247899
Q ss_pred EeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEeec
Q 039533 706 VYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVGDF 785 (949)
Q Consensus 706 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~Df 785 (949)
||||+++ +|.+++.. ....+++..++.++.|+++||+|||+. +++|+||||+||++++++.+||+||
T Consensus 78 v~e~~~~-~l~~~~~~---------~~~~~~~~~~~~i~~~i~~al~~LH~~---~~~h~dl~p~nil~~~~~~~~l~d~ 144 (287)
T cd07840 78 VFEYMDH-DLTGLLDS---------PEVKFTESQIKCYMKQLLEGLQYLHSN---GILHRDIKGSNILINNDGVLKLADF 144 (287)
T ss_pred Eeccccc-cHHHHHhc---------cCCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCcHHHeEEcCCCCEEEccc
Confidence 9999975 89888862 124689999999999999999999977 8999999999999999999999999
Q ss_pred ccceecCCCCCccccccccCccCccCccccCC-CccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhc---cccC
Q 039533 786 GLARILSPDHTQTSSFSVKGSLGYIAPEYGVG-CEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFG---RKAL 861 (949)
Q Consensus 786 G~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~---~~~~ 861 (949)
|.+.......... .....++..|+|||.+.+ ..++.++||||||+++|||++|+.||+...... ...... ....
T Consensus 145 g~~~~~~~~~~~~-~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~-~~~~~~~~~~~~~ 222 (287)
T cd07840 145 GLARPYTKRNSAD-YTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELE-QLEKIFELCGSPT 222 (287)
T ss_pred cceeeccCCCccc-ccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHHHhCCCc
Confidence 9998765543211 123347889999998765 457899999999999999999999996432211 011000 0000
Q ss_pred CCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHH-HHHHHHHHhhccccCCCCCCCCHHHHHH
Q 039533 862 PDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIE-CLISMVRIGVACSMELPQDRTNMTNVVH 926 (949)
Q Consensus 862 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 926 (949)
........+.. ..+.... .........+.... ++..+.+++.+|++.+|++||+++|+++
T Consensus 223 ~~~~~~~~~~~----~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~ 283 (287)
T cd07840 223 DENWPGVSKLP----WFENLKP-KKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQ 283 (287)
T ss_pred hhhccccccch----hhhhccc-cccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence 00000000000 0000000 00000000011112 2678899999999999999999999975
No 336
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=100.00 E-value=7.7e-33 Score=303.98 Aligned_cols=280 Identities=24% Similarity=0.259 Sum_probs=197.6
Q ss_pred hcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCC--cchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCcc
Q 039533 625 TSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHH--GASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDF 702 (949)
Q Consensus 625 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 702 (949)
.++|++.+.||+|+||.||+|.+..+++.||+|+++.... .....+.+|+.++++++|+||+++++++.+.. .+.
T Consensus 6 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~---~~~ 82 (309)
T cd07845 6 VTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKH---LDS 82 (309)
T ss_pred ccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCC---CCe
Confidence 4689999999999999999999998899999999875432 22345678999999999999999999976432 235
Q ss_pred ceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEE
Q 039533 703 KASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARV 782 (949)
Q Consensus 703 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl 782 (949)
.++||||+++ +|.+++.. ....+++.++..++.|++.|++|||+. +++||||||+||++++++.+||
T Consensus 83 ~~lv~e~~~~-~l~~~l~~---------~~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~kL 149 (309)
T cd07845 83 IFLVMEYCEQ-DLASLLDN---------MPTPFSESQVKCLMLQLLRGLQYLHEN---FIIHRDLKVSNLLLTDKGCLKI 149 (309)
T ss_pred EEEEEecCCC-CHHHHHHh---------cccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEE
Confidence 7999999974 88888762 124589999999999999999999977 8999999999999999999999
Q ss_pred eecccceecCCCCCccccccccCccCccCccccCC-CccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhccccC
Q 039533 783 GDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVG-CEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKAL 861 (949)
Q Consensus 783 ~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~ 861 (949)
+|||.+.......... ....++..|+|||++.+ ..++.++||||+||++|||++|+.||....... .+. ......
T Consensus 150 ~dfg~~~~~~~~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~-~~~-~~~~~~ 225 (309)
T cd07845 150 ADFGLARTYGLPAKPM--TPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIE-QLD-LIIQLL 225 (309)
T ss_pred CccceeeecCCccCCC--CcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHH-HHHHhc
Confidence 9999998765432211 12335788999999875 457899999999999999999999996432211 000 000000
Q ss_pred CCchhhhcccCCCCCc-hhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 039533 862 PDDVMDIVDSSLLPDD-EDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVH 926 (949)
Q Consensus 862 ~~~~~~~~d~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 926 (949)
......... ....-+ ............ ..........+.+.+++.+|++.||++|||+.|+++
T Consensus 226 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~ 289 (309)
T cd07845 226 GTPNESIWP-GFSDLPLVGKFTLPKQPYN-NLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALE 289 (309)
T ss_pred CCCChhhch-hhhcccccccccccCCCCC-chHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence 000000000 000000 000000000000 000001123556789999999999999999999986
No 337
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-34 Score=334.79 Aligned_cols=255 Identities=24% Similarity=0.291 Sum_probs=199.4
Q ss_pred HHhcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCC--cchHHHHHHHHHHHhcCCCcceeEEeeeecccccCC
Q 039533 623 NATSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHH--GASRSFIAECKALKSIRHRNLVKVLTACLGADYRGN 700 (949)
Q Consensus 623 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 700 (949)
..+-+|+-...||.|.||.||.|....+|...|+|.++.+.. ...+...+|..++..++|||+|++||+-...+
T Consensus 1232 nV~~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRe---- 1307 (1509)
T KOG4645|consen 1232 NVTFRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHRE---- 1307 (1509)
T ss_pred cceeeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecHH----
Confidence 334577888999999999999999999999999999875433 33467889999999999999999999855444
Q ss_pred ccceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCce
Q 039533 701 DFKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTA 780 (949)
Q Consensus 701 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~ 780 (949)
..+|.||||++|+|.+.+. .++..++.....+..|++.|++|||++ |||||||||.||+++.+|.+
T Consensus 1308 -kv~IFMEyC~~GsLa~ll~----------~gri~dE~vt~vyt~qll~gla~LH~~---gIVHRDIK~aNI~Ld~~g~i 1373 (1509)
T KOG4645|consen 1308 -KVYIFMEYCEGGSLASLLE----------HGRIEDEMVTRVYTKQLLEGLAYLHEH---GIVHRDIKPANILLDFNGLI 1373 (1509)
T ss_pred -HHHHHHHHhccCcHHHHHH----------hcchhhhhHHHHHHHHHHHHHHHHHhc---CceecCCCccceeeecCCcE
Confidence 7899999999999999997 334466667778999999999999988 99999999999999999999
Q ss_pred EEeecccceecCCCCC--ccccccccCccCccCccccCCCc---cCCccchHHHHHHHHHHHhCCCCCccccccCchhhh
Q 039533 781 RVGDFGLARILSPDHT--QTSSFSVKGSLGYIAPEYGVGCE---VSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHN 855 (949)
Q Consensus 781 kl~DfG~a~~~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~---~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~ 855 (949)
|++|||.|..+..... ...-....||+.|||||++.+.. ..-++||||+|||+.||.||++||.........+..
T Consensus 1374 K~~DFGsa~ki~~~~~~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne~aIMy~ 1453 (1509)
T KOG4645|consen 1374 KYGDFGSAVKIKNNAQTMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNEWAIMYH 1453 (1509)
T ss_pred EeecccceeEecCchhcCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccchhHHHhH
Confidence 9999999998766532 12222467999999999988643 567899999999999999999999643222111100
Q ss_pred hccccCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 039533 856 FGRKALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVH 926 (949)
Q Consensus 856 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 926 (949)
-+.. ..... +.....+=.+++..|+..||++|.++.|+++
T Consensus 1454 V~~g------------h~Pq~-------------------P~~ls~~g~dFle~Cl~~dP~~Rw~~~qlle 1493 (1509)
T KOG4645|consen 1454 VAAG------------HKPQI-------------------PERLSSEGRDFLEHCLEQDPKMRWTASQLLE 1493 (1509)
T ss_pred Hhcc------------CCCCC-------------------chhhhHhHHHHHHHHHhcCchhhhHHHHHHH
Confidence 0000 00000 1123445578899999999999988876554
No 338
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-33 Score=275.27 Aligned_cols=251 Identities=21% Similarity=0.240 Sum_probs=193.1
Q ss_pred CCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCC-CcchHHHHHHHHHHHhc-CCCcceeEEeeeecccccCCccce
Q 039533 627 GFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQH-HGASRSFIAECKALKSI-RHRNLVKVLTACLGADYRGNDFKA 704 (949)
Q Consensus 627 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~~ 704 (949)
+.+....||.|..|.||+++.+.+|..+|||.+.... .++.+++...+.++.+- ++|+||+.+|||.... ..+
T Consensus 93 dl~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~-----dV~ 167 (391)
T KOG0983|consen 93 DLENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNT-----DVF 167 (391)
T ss_pred HhhhHHhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCc-----hHH
Confidence 3455678999999999999999999999999997543 34457788888877766 4899999999987655 678
Q ss_pred eEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEee
Q 039533 705 SVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVGD 784 (949)
Q Consensus 705 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~D 784 (949)
+.||.|.. -++.++.. ...++++.-+-++...++.||.||.+++ +|+|||+||+|||+|+.|++|+||
T Consensus 168 IcMelMs~-C~ekLlkr---------ik~piPE~ilGk~tva~v~AL~YLKeKH--~viHRDvKPSNILlDe~GniKlCD 235 (391)
T KOG0983|consen 168 ICMELMST-CAEKLLKR---------IKGPIPERILGKMTVAIVKALYYLKEKH--GVIHRDVKPSNILLDERGNIKLCD 235 (391)
T ss_pred HHHHHHHH-HHHHHHHH---------hcCCchHHhhhhhHHHHHHHHHHHHHhc--ceeecccCccceEEccCCCEEeec
Confidence 88998843 44555542 2345777788889999999999999876 999999999999999999999999
Q ss_pred cccceecCCCCCccccccccCccCccCccccCC---CccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhccccC
Q 039533 785 FGLARILSPDHTQTSSFSVKGSLGYIAPEYGVG---CEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKAL 861 (949)
Q Consensus 785 fG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~ 861 (949)
||++..+.+...... ..|-+.|||||.+.- .+|+.++||||||++++|+.||+.||.....+...+..... ..
T Consensus 236 FGIsGrlvdSkAhtr---sAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdFe~ltkvln-~e 311 (391)
T KOG0983|consen 236 FGISGRLVDSKAHTR---SAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTDFEVLTKVLN-EE 311 (391)
T ss_pred ccccceeeccccccc---ccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCccHHHHHHHHh-cC
Confidence 999988877665443 458999999998764 36899999999999999999999999754322211111111 00
Q ss_pred CCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 039533 862 PDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVH 926 (949)
Q Consensus 862 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 926 (949)
+ +.+.+ .......+.+++..|+..|+.+||...++++
T Consensus 312 P--------P~L~~--------------------~~gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~ 348 (391)
T KOG0983|consen 312 P--------PLLPG--------------------HMGFSPDFQSFVKDCLTKDHRKRPKYNKLLE 348 (391)
T ss_pred C--------CCCCc--------------------ccCcCHHHHHHHHHHhhcCcccCcchHHHhc
Confidence 1 11111 0123456789999999999999999988764
No 339
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=100.00 E-value=5.1e-33 Score=307.21 Aligned_cols=282 Identities=21% Similarity=0.242 Sum_probs=200.1
Q ss_pred HHHHHhcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCC--CcchHHHHHHHHHHHhcCCCcceeEEeeeecccc
Q 039533 620 DLYNATSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQH--HGASRSFIAECKALKSIRHRNLVKVLTACLGADY 697 (949)
Q Consensus 620 ~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 697 (949)
++...+++|++.+.||+|+||.||+|.+..+++.||+|++.... ....+.+.+|++++++++||||+++++++...
T Consensus 4 ~~~~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~-- 81 (328)
T cd07856 4 TVFEITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISP-- 81 (328)
T ss_pred ceeccccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecC--
Confidence 44567889999999999999999999999899999999885432 22346788999999999999999999987532
Q ss_pred cCCccceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCC
Q 039533 698 RGNDFKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDY 777 (949)
Q Consensus 698 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~ 777 (949)
....++||||+ +++|.+++. ...+++..+..++.|++.||+|||+. +|+||||+|+||+++++
T Consensus 82 --~~~~~lv~e~~-~~~L~~~~~-----------~~~~~~~~~~~~~~ql~~aL~~LH~~---~iiH~dl~p~Nili~~~ 144 (328)
T cd07856 82 --LEDIYFVTELL-GTDLHRLLT-----------SRPLEKQFIQYFLYQILRGLKYVHSA---GVVHRDLKPSNILINEN 144 (328)
T ss_pred --CCcEEEEeehh-ccCHHHHHh-----------cCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEeECCC
Confidence 23678999998 568988875 23467888889999999999999977 89999999999999999
Q ss_pred CceEEeecccceecCCCCCccccccccCccCccCccccCC-CccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhh
Q 039533 778 MTARVGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVG-CEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNF 856 (949)
Q Consensus 778 ~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~ 856 (949)
+.++|+|||.+....... ....++..|+|||++.+ ..++.++|||||||++|||++|+.||....... ....
T Consensus 145 ~~~~l~dfg~~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~--~~~~ 217 (328)
T cd07856 145 CDLKICDFGLARIQDPQM-----TGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVN--QFSI 217 (328)
T ss_pred CCEEeCccccccccCCCc-----CCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH--HHHH
Confidence 999999999987543321 12347889999998765 568999999999999999999999996432110 0000
Q ss_pred ccccCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHH
Q 039533 857 GRKALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHE 927 (949)
Q Consensus 857 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 927 (949)
..........++.+........+.........+..........+..+.+++.+|++.+|++||++.|++..
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~ 288 (328)
T cd07856 218 ITDLLGTPPDDVINTICSENTLRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAH 288 (328)
T ss_pred HHHHhCCCCHHHHHhccchhhHHHHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 00000000011111100000000000000000000000111235678999999999999999999998654
No 340
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=100.00 E-value=6.5e-33 Score=301.36 Aligned_cols=244 Identities=23% Similarity=0.304 Sum_probs=194.2
Q ss_pred CeeeeecCceEEEEEEcCCCEEEEEEEEecCCCcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCccceeEeeecc
Q 039533 632 NLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFKASVYEFMH 711 (949)
Q Consensus 632 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~ 711 (949)
.+||+|+||.||+|....+++.||||++..........+.+|+.++++++|+||+++++++...+ ..++||||++
T Consensus 26 ~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~-----~~~lv~e~~~ 100 (292)
T cd06657 26 IKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGD-----ELWVVMEFLE 100 (292)
T ss_pred HHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcCCcchhheeeEEEeCC-----EEEEEEecCC
Confidence 67999999999999998889999999986544445567889999999999999999999976544 7899999999
Q ss_pred CCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEeecccceec
Q 039533 712 YGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVGDFGLARIL 791 (949)
Q Consensus 712 ~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~ 791 (949)
+++|.+++. ...+++..+..++.|++.|++|||+. +++||||+|+||++++++.++|+|||.+...
T Consensus 101 ~~~L~~~~~-----------~~~~~~~~~~~~~~ql~~~l~~lH~~---givH~dl~p~Nilv~~~~~~~l~dfg~~~~~ 166 (292)
T cd06657 101 GGALTDIVT-----------HTRMNEEQIAAVCLAVLKALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQV 166 (292)
T ss_pred CCcHHHHHh-----------cCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEcccccceec
Confidence 999999875 13478899999999999999999977 8999999999999999999999999998765
Q ss_pred CCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhccccCCCchhhhccc
Q 039533 792 SPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKALPDDVMDIVDS 871 (949)
Q Consensus 792 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 871 (949)
....... ....|+..|+|||+..+..++.++||||+|+++|||++|+.||...... ..........+.
T Consensus 167 ~~~~~~~--~~~~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~--~~~~~~~~~~~~-------- 234 (292)
T cd06657 167 SKEVPRR--KSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPL--KAMKMIRDNLPP-------- 234 (292)
T ss_pred ccccccc--cccccCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHhhCCc--------
Confidence 4332211 2345889999999988888899999999999999999999998532111 000000000000
Q ss_pred CCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 039533 872 SLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVH 926 (949)
Q Consensus 872 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 926 (949)
.+ ......+..+.+++.+|++.+|.+||++.|+++
T Consensus 235 ~~--------------------~~~~~~~~~l~~li~~~l~~~P~~R~~~~~ll~ 269 (292)
T cd06657 235 KL--------------------KNLHKVSPSLKGFLDRLLVRDPAQRATAAELLK 269 (292)
T ss_pred cc--------------------CCcccCCHHHHHHHHHHHhCCcccCcCHHHHhc
Confidence 00 001123445788999999999999999999887
No 341
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=100.00 E-value=9.8e-33 Score=307.16 Aligned_cols=292 Identities=17% Similarity=0.195 Sum_probs=203.8
Q ss_pred HHHHhcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCC--CcchHHHHHHHHHHHhcCCCcceeEEeeeeccccc
Q 039533 621 LYNATSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQH--HGASRSFIAECKALKSIRHRNLVKVLTACLGADYR 698 (949)
Q Consensus 621 l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 698 (949)
+....++|++.+.||+|+||.||+|.+..+++.||||++.... ....+.+.+|++++++++||||+++++++......
T Consensus 10 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 89 (343)
T cd07880 10 IWEVPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSL 89 (343)
T ss_pred hhccccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCccc
Confidence 3445678999999999999999999998889999999985432 22235688999999999999999999987643311
Q ss_pred -CCccceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCC
Q 039533 699 -GNDFKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDY 777 (949)
Q Consensus 699 -~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~ 777 (949)
.....++||||+ +++|.+++. ...+++..++.++.|+++||+|||+. +|+||||||+||+++.+
T Consensus 90 ~~~~~~~lv~e~~-~~~l~~~~~-----------~~~l~~~~~~~i~~qi~~al~~LH~~---gi~H~dlkp~Nill~~~ 154 (343)
T cd07880 90 DRFHDFYLVMPFM-GTDLGKLMK-----------HEKLSEDRIQFLVYQMLKGLKYIHAA---GIIHRDLKPGNLAVNED 154 (343)
T ss_pred cccceEEEEEecC-CCCHHHHHh-----------cCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCC
Confidence 112468999998 779988875 23588999999999999999999977 89999999999999999
Q ss_pred CceEEeecccceecCCCCCccccccccCccCccCccccCC-CccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhh
Q 039533 778 MTARVGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVG-CEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNF 856 (949)
Q Consensus 778 ~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~ 856 (949)
+.+||+|||.+........ ...++..|+|||++.+ ..++.++||||+||++|++++|+.||....... .....
T Consensus 155 ~~~kl~dfg~~~~~~~~~~-----~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~-~~~~~ 228 (343)
T cd07880 155 CELKILDFGLARQTDSEMT-----GYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLD-QLMEI 228 (343)
T ss_pred CCEEEeecccccccccCcc-----ccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHH
Confidence 9999999999986543221 2347889999998876 458899999999999999999999996332110 01000
Q ss_pred ccccCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHH--HHHHHhHHh
Q 039533 857 GRKALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVV--HELQSIKNI 934 (949)
Q Consensus 857 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~--~~L~~i~~~ 934 (949)
... ......++.+................................+.+++.+|++.||++|||+.+++ ..++.....
T Consensus 229 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~~~~~~~~~~~ 307 (343)
T cd07880 229 MKV-TGTPSKEFVQKLQSEDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALAHPYFEEFHDP 307 (343)
T ss_pred HHh-cCCCCHHHHHhhcchhHHHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhcCccHhhhcCc
Confidence 000 00000010000000000000000000000000001123345688999999999999999999998 445554443
No 342
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=100.00 E-value=1.6e-32 Score=302.23 Aligned_cols=247 Identities=26% Similarity=0.329 Sum_probs=193.3
Q ss_pred CCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCC---cchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCccce
Q 039533 628 FSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHH---GASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFKA 704 (949)
Q Consensus 628 y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 704 (949)
|...+.||+|+||.||+|++..++..||+|++..... .....+.+|++++++++|||++++++++.... ..+
T Consensus 27 f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~-----~~~ 101 (317)
T cd06635 27 FTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREH-----TAW 101 (317)
T ss_pred hhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCC-----eEE
Confidence 6778899999999999999988899999999874322 22357889999999999999999999976544 789
Q ss_pred eEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEee
Q 039533 705 SVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVGD 784 (949)
Q Consensus 705 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~D 784 (949)
+||||+. |++.+.+.. ....+++.++..++.|++.|+.|||+. +|+||||+|+||+++.++.+||+|
T Consensus 102 lv~e~~~-g~l~~~~~~---------~~~~l~~~~~~~i~~~i~~~l~~lH~~---~i~H~dL~p~Nil~~~~~~~kl~d 168 (317)
T cd06635 102 LVMEYCL-GSASDLLEV---------HKKPLQEVEIAAITHGALQGLAYLHSH---NMIHRDIKAGNILLTEPGQVKLAD 168 (317)
T ss_pred EEEeCCC-CCHHHHHHH---------hcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcccEEECCCCCEEEec
Confidence 9999997 477777642 234588999999999999999999977 899999999999999999999999
Q ss_pred cccceecCCCCCccccccccCccCccCccccC---CCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhccccC
Q 039533 785 FGLARILSPDHTQTSSFSVKGSLGYIAPEYGV---GCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKAL 861 (949)
Q Consensus 785 fG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~ 861 (949)
||.+....... ...|+..|+|||++. ...++.++|||||||++|||++|+.||....... ..
T Consensus 169 fg~~~~~~~~~------~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~-~~-------- 233 (317)
T cd06635 169 FGSASIASPAN------SFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS-AL-------- 233 (317)
T ss_pred CCCccccCCcc------cccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHHH-HH--------
Confidence 99987644322 234888999999874 4568899999999999999999999985321110 00
Q ss_pred CCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHH
Q 039533 862 PDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHELQ 929 (949)
Q Consensus 862 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~ 929 (949)
..+........ .....+..+.+++.+|++.+|++||++.||++...
T Consensus 234 ----~~~~~~~~~~~------------------~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~ 279 (317)
T cd06635 234 ----YHIAQNESPTL------------------QSNEWSDYFRNFVDSCLQKIPQDRPTSEELLKHMF 279 (317)
T ss_pred ----HHHHhccCCCC------------------CCccccHHHHHHHHHHccCCcccCcCHHHHHhChh
Confidence 00100000000 00123456889999999999999999999998643
No 343
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=100.00 E-value=2.2e-32 Score=293.18 Aligned_cols=253 Identities=21% Similarity=0.250 Sum_probs=195.6
Q ss_pred cCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCC-----CcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCC
Q 039533 626 SGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQH-----HGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGN 700 (949)
Q Consensus 626 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 700 (949)
.+|++.+.||+|+||.||+|++..+++.||+|++.... ....+.+.+|++++++++|+||+++++++...+ .
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~---~ 78 (264)
T cd06653 2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPE---E 78 (264)
T ss_pred CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCC---C
Confidence 57899999999999999999998889999999985321 223457889999999999999999999875432 2
Q ss_pred ccceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCce
Q 039533 701 DFKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTA 780 (949)
Q Consensus 701 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~ 780 (949)
...++|+||+++++|.+++.. ...+++..+..++.|++.|+.|||+. +++||||||+||+++.++.+
T Consensus 79 ~~~~~v~e~~~~~~L~~~~~~----------~~~l~~~~~~~~~~~i~~al~~LH~~---~i~H~dl~p~ni~i~~~~~~ 145 (264)
T cd06653 79 KKLSIFVEYMPGGSIKDQLKA----------YGALTENVTRRYTRQILQGVSYLHSN---MIVHRDIKGANILRDSAGNV 145 (264)
T ss_pred CEEEEEEEeCCCCcHHHHHHH----------cCCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCE
Confidence 357899999999999999862 23478889999999999999999977 89999999999999999999
Q ss_pred EEeecccceecCCCCC-ccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhccc
Q 039533 781 RVGDFGLARILSPDHT-QTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRK 859 (949)
Q Consensus 781 kl~DfG~a~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~ 859 (949)
+|+|||.++....... ........|+..|+|||++.+..++.++|||||||++||+++|+.||....... ..
T Consensus 146 ~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-~~------ 218 (264)
T cd06653 146 KLGDFGASKRIQTICMSGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEAMA-AI------ 218 (264)
T ss_pred EECccccccccccccccCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccCHHH-HH------
Confidence 9999999986532211 111113458899999999998889999999999999999999999986321110 00
Q ss_pred cCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 039533 860 ALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVH 926 (949)
Q Consensus 860 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 926 (949)
.........+. .+......+.+++.+|+. +|..||++.+++.
T Consensus 219 ------~~~~~~~~~~~------------------~p~~~~~~~~~~i~~~l~-~~~~r~~~~~~~~ 260 (264)
T cd06653 219 ------FKIATQPTKPM------------------LPDGVSDACRDFLKQIFV-EEKRRPTAEFLLR 260 (264)
T ss_pred ------HHHHcCCCCCC------------------CCcccCHHHHHHHHHHhc-CcccCccHHHHhc
Confidence 00000000000 011234567899999999 5799999998764
No 344
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=100.00 E-value=1.8e-32 Score=292.61 Aligned_cols=252 Identities=22% Similarity=0.341 Sum_probs=202.2
Q ss_pred CCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCC--cchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCccce
Q 039533 627 GFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHH--GASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFKA 704 (949)
Q Consensus 627 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 704 (949)
+|++.+.||+|++|.||+|.+..++..||+|++..... ...+.+.+|++++++++|+|++++++.+... ...+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~-----~~~~ 75 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEK-----GKLC 75 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecC-----CEEE
Confidence 57888999999999999999998899999999975543 4456788999999999999999999987654 3789
Q ss_pred eEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEee
Q 039533 705 SVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVGD 784 (949)
Q Consensus 705 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~D 784 (949)
+|+||+++++|.+++.... .....+++.++..++.|++.|++|||+. +++|+||+|+||++++++.++|+|
T Consensus 76 lv~e~~~~~~L~~~l~~~~------~~~~~~~~~~~~~i~~~i~~~l~~lh~~---~~~H~dl~~~nil~~~~~~~~l~d 146 (258)
T cd08215 76 IVMEYADGGDLSQKIKKQK------KEGKPFPEEQILDWFVQLCLALKYLHSR---KILHRDIKPQNIFLTSNGLVKLGD 146 (258)
T ss_pred EEEEecCCCcHHHHHHHhh------ccCCCcCHHHHHHHHHHHHHHHHHHHhC---CEecccCChHHeEEcCCCcEEECC
Confidence 9999999999999997321 1235689999999999999999999977 999999999999999999999999
Q ss_pred cccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhccccCCCc
Q 039533 785 FGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKALPDD 864 (949)
Q Consensus 785 fG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~ 864 (949)
||.+.......... ....|++.|+|||...+..++.++||||+|+++|+|++|+.||+...... ..
T Consensus 147 ~~~~~~~~~~~~~~--~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~-----~~------- 212 (258)
T cd08215 147 FGISKVLSSTVDLA--KTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGENLLE-----LA------- 212 (258)
T ss_pred ccceeecccCccee--cceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCcHHH-----HH-------
Confidence 99998765543211 13458889999999988889999999999999999999999986332110 00
Q ss_pred hhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 039533 865 VMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVH 926 (949)
Q Consensus 865 ~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 926 (949)
...........+ ...+..+.+++.+|+..+|++|||+.|+++
T Consensus 213 -~~~~~~~~~~~~-------------------~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~ 254 (258)
T cd08215 213 -LKILKGQYPPIP-------------------SQYSSELRNLVSSLLQKDPEERPSIAQILQ 254 (258)
T ss_pred -HHHhcCCCCCCC-------------------CCCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 001110000000 023456789999999999999999999975
No 345
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=100.00 E-value=3.8e-32 Score=295.34 Aligned_cols=278 Identities=22% Similarity=0.247 Sum_probs=198.9
Q ss_pred CCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCC--cchHHHHHHHHHHHhc---CCCcceeEEeeeecccccCCcc
Q 039533 628 FSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHH--GASRSFIAECKALKSI---RHRNLVKVLTACLGADYRGNDF 702 (949)
Q Consensus 628 y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l---~h~niv~~~~~~~~~~~~~~~~ 702 (949)
|++.+.||+|+||.||+|++..+++.||+|+++.... .....+.+|+.+++++ +|+|++++++++...+......
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~ 80 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELK 80 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCce
Confidence 6778899999999999999988899999999974332 2234566788877766 5999999999988766444445
Q ss_pred ceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEE
Q 039533 703 KASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARV 782 (949)
Q Consensus 703 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl 782 (949)
.+++|||+. ++|.+++... ....+++..+..++.|++.||+|||+. +++|+||+|+||++++++.+||
T Consensus 81 ~~l~~e~~~-~~l~~~l~~~--------~~~~l~~~~~~~~~~~i~~al~~LH~~---~i~h~~l~~~nili~~~~~~~l 148 (287)
T cd07838 81 LTLVFEHVD-QDLATYLSKC--------PKPGLPPETIKDLMRQLLRGVDFLHSH---RIVHRDLKPQNILVTSDGQVKI 148 (287)
T ss_pred eEEEehhcc-cCHHHHHHHc--------cCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCChhhEEEccCCCEEE
Confidence 899999997 4898888621 123589999999999999999999977 8999999999999999999999
Q ss_pred eecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhccccCC
Q 039533 783 GDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKALP 862 (949)
Q Consensus 783 ~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~ 862 (949)
+|||.+.......... ...++..|+|||++.+..++.++|||||||++|||++|++||+.....+ .+.........
T Consensus 149 ~dfg~~~~~~~~~~~~---~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~~-~~~~~~~~~~~ 224 (287)
T cd07838 149 ADFGLARIYSFEMALT---SVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSEAD-QLDKIFDVIGL 224 (287)
T ss_pred eccCcceeccCCcccc---cccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCChHH-HHHHHHHHcCC
Confidence 9999998765443221 2347889999999998889999999999999999999999986432211 11111110000
Q ss_pred CchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 039533 863 DDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVH 926 (949)
Q Consensus 863 ~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 926 (949)
.......... ........ ............+....+.+++.+|++.||++||++.|+++
T Consensus 225 ~~~~~~~~~~--~~~~~~~~---~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~ 283 (287)
T cd07838 225 PSEEEWPRNV--SLPRSSFP---SYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQ 283 (287)
T ss_pred CChHhcCCCc--ccchhhcc---cccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhc
Confidence 0000000000 00000000 00000001112244567889999999999999999999874
No 346
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=5.1e-33 Score=301.92 Aligned_cols=251 Identities=23% Similarity=0.278 Sum_probs=201.9
Q ss_pred HHhcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCCcc--hHHHHHHHHHHHhcCCCcceeEEeeeecccccCC
Q 039533 623 NATSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHGA--SRSFIAECKALKSIRHRNLVKVLTACLGADYRGN 700 (949)
Q Consensus 623 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 700 (949)
.-...|.+.+.||+|.|+.|.+|++..++..||||.++...... ...+.+|+++|+.++|||||+++.+....
T Consensus 53 ~~vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~----- 127 (596)
T KOG0586|consen 53 NSVGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETE----- 127 (596)
T ss_pred ccccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeec-----
Confidence 34567999999999999999999999999999999997654333 24588999999999999999999996544
Q ss_pred ccceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCce
Q 039533 701 DFKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTA 780 (949)
Q Consensus 701 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~ 780 (949)
...|+||||+.+|.+++|+.. ........+..++.|+++|++|+|++ .|||||||++||+++.+.++
T Consensus 128 ~~lylV~eya~~ge~~~yl~~----------~gr~~e~~ar~~F~q~vsaveYcH~k---~ivHrdLk~eNilL~~~mni 194 (596)
T KOG0586|consen 128 ATLYLVMEYASGGELFDYLVK----------HGRMKEKEARAKFRQIVSAVEYCHSK---NIVHRDLKAENILLDENMNI 194 (596)
T ss_pred ceeEEEEEeccCchhHHHHHh----------cccchhhhhhhhhHHHHHHHHHHhhc---ceeccccchhhcccccccce
Confidence 489999999999999999972 34455688999999999999999988 89999999999999999999
Q ss_pred EEeecccceecCCCCCccccccccCccCccCccccCCCcc-CCccchHHHHHHHHHHHhCCCCCccccccCchhhhhccc
Q 039533 781 RVGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEV-STNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRK 859 (949)
Q Consensus 781 kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~ 859 (949)
||+|||++.++....... ...|++.|.|||++.+.+| ++++|+||+|+++|-|+.|..||+...-..
T Consensus 195 kIaDfgfS~~~~~~~~lq---t~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk~--------- 262 (596)
T KOG0586|consen 195 KIADFGFSTFFDYGLMLQ---TFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNLKE--------- 262 (596)
T ss_pred eeeccccceeeccccccc---ccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCccccc---------
Confidence 999999999987554322 3569999999999999876 589999999999999999999997431110
Q ss_pred cCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHH
Q 039533 860 ALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHE 927 (949)
Q Consensus 860 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 927 (949)
+-++.+.+.. +++. -......+++++++..+|.+|++++++++.
T Consensus 263 --------Lr~rvl~gk~--------------rIp~--~ms~dce~lLrk~lvl~Pskr~~~dqim~~ 306 (596)
T KOG0586|consen 263 --------LRPRVLRGKY--------------RIPF--YMSCDCEDLLRKFLVLNPSKRGPCDQIMKD 306 (596)
T ss_pred --------ccchheeeee--------------cccc--eeechhHHHHHHhhccCccccCCHHHhhhh
Confidence 0000000000 0000 112235678889999999999999999764
No 347
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=100.00 E-value=2.2e-32 Score=296.50 Aligned_cols=274 Identities=20% Similarity=0.213 Sum_probs=199.7
Q ss_pred CCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCCc--chHHHHHHHHHHHhcCCCcceeEEeeeecccccCCcccee
Q 039533 628 FSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHG--ASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFKAS 705 (949)
Q Consensus 628 y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 705 (949)
|++.+.||+|++|.||+|....+++.+++|+++..... ....+.+|++++++++|+||+++++++... ...++
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~-----~~~~~ 75 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHK-----GDLYL 75 (283)
T ss_pred CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccC-----CCEEE
Confidence 67788999999999999999888999999998754332 346788999999999999999999986544 47899
Q ss_pred EeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEeec
Q 039533 706 VYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVGDF 785 (949)
Q Consensus 706 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~Df 785 (949)
||||+++ ++.+++.. ....+++.++..++.|++.||+|||+. +|+||||||+||++++++.++|+||
T Consensus 76 v~e~~~~-~l~~~l~~---------~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l~df 142 (283)
T cd05118 76 VFEFMDT-DLYKLIKD---------RQRGLPESLIKSYLYQLLQGLAFCHSH---GILHRDLKPENLLINTEGVLKLADF 142 (283)
T ss_pred EEeccCC-CHHHHHHh---------hcccCCHHHHHHHHHHHHHHHHHHHHC---CeeecCcCHHHEEECCCCcEEEeee
Confidence 9999975 88888762 224689999999999999999999977 8999999999999999999999999
Q ss_pred ccceecCCCCCccccccccCccCccCccccCCC-ccCCccchHHHHHHHHHHHhCCCCCccccccCch--hhhhccccCC
Q 039533 786 GLARILSPDHTQTSSFSVKGSLGYIAPEYGVGC-EVSTNGDVYSYGILLLELVIGKKPIDIMFEGDIN--LHNFGRKALP 862 (949)
Q Consensus 786 G~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~--~~~~~~~~~~ 862 (949)
|.+........ ......++..|+|||.+.+. .++.++||||+|+++|+|+||+.||......+.. .........+
T Consensus 143 ~~~~~~~~~~~--~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (283)
T cd05118 143 GLARSFGSPVR--PYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKIFRTLGTPDP 220 (283)
T ss_pred eeeEecCCCcc--cccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCch
Confidence 99987765431 11134578899999998776 7899999999999999999999998643221100 0000000000
Q ss_pred CchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 039533 863 DDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVH 926 (949)
Q Consensus 863 ~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 926 (949)
.......+ .... .. ................+.+.++.+++.+|++.||.+||++.|++.
T Consensus 221 ~~~~~~~~-~~~~-~~---~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~ 279 (283)
T cd05118 221 EVWPKFTS-LARN-YK---FSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALA 279 (283)
T ss_pred Hhcccchh-hhhh-hh---hhhccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhh
Confidence 00000000 0000 00 000000000001112345678999999999999999999999975
No 348
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=100.00 E-value=1.7e-32 Score=303.61 Aligned_cols=286 Identities=20% Similarity=0.262 Sum_probs=195.3
Q ss_pred Ceeeee--cCceEEEEEEcCCCEEEEEEEEecCCC--cchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCccceeEe
Q 039533 632 NLVGVG--SFGSVYKGIIDEGRTTIAVKVFNLQHH--GASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFKASVY 707 (949)
Q Consensus 632 ~~lg~G--~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~ 707 (949)
..||+| +||+||+|++..+++.||+|++..... ...+.+.+|+.+++.++||||+++++++...+ ..++||
T Consensus 4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~-----~~~~v~ 78 (328)
T cd08226 4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGS-----WLWVIS 78 (328)
T ss_pred HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCC-----ceEEEE
Confidence 356666 899999999988999999999875432 23467889999999999999999999976544 789999
Q ss_pred eeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEeeccc
Q 039533 708 EFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVGDFGL 787 (949)
Q Consensus 708 e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~DfG~ 787 (949)
||+.++++.+++... ....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.++++||+.
T Consensus 79 e~~~~~~l~~~l~~~--------~~~~~~~~~~~~~~~qi~~aL~~lH~~---~ivHrDlkp~Nill~~~~~~~~~~~~~ 147 (328)
T cd08226 79 PFMAYGSANSLLKTY--------FPEGMSEALIGNILFGALRGLNYLHQN---GYIHRNIKASHILISGDGLVSLSGLSH 147 (328)
T ss_pred ecccCCCHHHHHHhh--------cccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEeCCCcEEEechHH
Confidence 999999999998732 123478899999999999999999977 899999999999999999999999986
Q ss_pred ceecCCCCCcc-----ccccccCccCccCccccCCC--ccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhcccc
Q 039533 788 ARILSPDHTQT-----SSFSVKGSLGYIAPEYGVGC--EVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKA 860 (949)
Q Consensus 788 a~~~~~~~~~~-----~~~~~~gt~~y~aPE~~~~~--~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~ 860 (949)
+.......... ......++..|+|||++.+. .++.++|||||||++|||++|+.||.................
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~ 227 (328)
T cd08226 148 LYSLVRNGQKAKVVYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQMLLQKLKGPP 227 (328)
T ss_pred HhhhhccCccccccccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHHHHHHhcCCC
Confidence 54332211100 00012256779999998763 478999999999999999999999965432211111000000
Q ss_pred C--------CCchhhhcccCCCCC--chh-hhh---hhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 039533 861 L--------PDDVMDIVDSSLLPD--DED-LIL---TGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVH 926 (949)
Q Consensus 861 ~--------~~~~~~~~d~~l~~~--~~~-~~~---~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 926 (949)
+ +.......+.....+ ..+ .+. .........+.+....+...+.+++.+|++.||++|||+.|+++
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~ 307 (328)
T cd08226 228 YSPLDITTFPCEESRMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLS 307 (328)
T ss_pred CCCccccccchhhhhhccchhhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhh
Confidence 0 000000000000000 000 000 00000011112223356678899999999999999999999964
Q ss_pred --HHHHhHH
Q 039533 927 --ELQSIKN 933 (949)
Q Consensus 927 --~L~~i~~ 933 (949)
.+..+++
T Consensus 308 ~~~~~~~~~ 316 (328)
T cd08226 308 HAFFKQVKE 316 (328)
T ss_pred CHHHHHHHH
Confidence 4444444
No 349
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=100.00 E-value=1.6e-32 Score=300.60 Aligned_cols=284 Identities=21% Similarity=0.255 Sum_probs=200.4
Q ss_pred HHhcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCC--cchHHHHHHHHHHHhcCCCcceeEEeeeeccc----
Q 039533 623 NATSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHH--GASRSFIAECKALKSIRHRNLVKVLTACLGAD---- 696 (949)
Q Consensus 623 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~---- 696 (949)
.+.++|++.+.||+|+||.||+|.+..+++.||+|+++.... .....+.+|++++++++||||+++++++.+..
T Consensus 4 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~ 83 (302)
T cd07864 4 RCVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALD 83 (302)
T ss_pred hhhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhh
Confidence 456789999999999999999999998899999999975432 23356788999999999999999999876533
Q ss_pred -ccCCccceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeec
Q 039533 697 -YRGNDFKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLD 775 (949)
Q Consensus 697 -~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~ 775 (949)
..+....++|+||+++ ++.+++.. ....+++..+..++.|++.||+|||+. +|+||||||+||+++
T Consensus 84 ~~~~~~~~~lv~e~~~~-~l~~~l~~---------~~~~~~~~~~~~i~~qi~~aL~~LH~~---~i~H~dl~p~nili~ 150 (302)
T cd07864 84 FKKDKGAFYLVFEYMDH-DLMGLLES---------GLVHFSEDHIKSFMKQLLEGLNYCHKK---NFLHRDIKCSNILLN 150 (302)
T ss_pred ccccCCcEEEEEcccCc-cHHHHHhc---------CCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEC
Confidence 1123378999999976 77777652 124589999999999999999999977 999999999999999
Q ss_pred CCCceEEeecccceecCCCCCccccccccCccCccCccccCCC-ccCCccchHHHHHHHHHHHhCCCCCccccccCchhh
Q 039533 776 DYMTARVGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGC-EVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLH 854 (949)
Q Consensus 776 ~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~ 854 (949)
+++.+||+|||.+.......... .....++..|+|||++.+. .++.++|||||||++|||++|++||...... ..+.
T Consensus 151 ~~~~~kl~dfg~~~~~~~~~~~~-~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~-~~~~ 228 (302)
T cd07864 151 NKGQIKLADFGLARLYNSEESRP-YTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQEL-AQLE 228 (302)
T ss_pred CCCcEEeCcccccccccCCcccc-cccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChH-HHHH
Confidence 99999999999998765433211 1123467889999987653 5789999999999999999999999643211 0110
Q ss_pred hh---ccccCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 039533 855 NF---GRKALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVH 926 (949)
Q Consensus 855 ~~---~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 926 (949)
.. .....+....++.......... .......... ......+..+.+++.+|++.+|++||++.++++
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~---~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~ 298 (302)
T cd07864 229 LISRLCGSPCPAVWPDVIKLPYFNTMK--PKKQYRRRLR---EEFSFIPTPALDLLDHMLTLDPSKRCTAEEALN 298 (302)
T ss_pred HHHHHhCCCChhhcccccccccccccc--cccccccchh---hhcCCCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 00 0000010011110000000000 0000000000 011123567899999999999999999999875
No 350
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=100.00 E-value=1.2e-33 Score=279.95 Aligned_cols=208 Identities=23% Similarity=0.339 Sum_probs=173.6
Q ss_pred hcCCCCCCeeeeecCceEEEEEEcCCC----EEEEEEEEecCCC--cchHHHHHHHHHHHhcCCCcceeEEeeeeccccc
Q 039533 625 TSGFSSANLVGVGSFGSVYKGIIDEGR----TTIAVKVFNLQHH--GASRSFIAECKALKSIRHRNLVKVLTACLGADYR 698 (949)
Q Consensus 625 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~----~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 698 (949)
...|..+..||+|.||.||+|....+. +.+|+|.++.... +......+|+..++.++|||++.+..++...
T Consensus 23 l~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~--- 99 (438)
T KOG0666|consen 23 LFEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSH--- 99 (438)
T ss_pred HHHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhcc---
Confidence 456889999999999999999665332 2689999975533 3446788999999999999999999887653
Q ss_pred CCccceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCC-
Q 039533 699 GNDFKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDY- 777 (949)
Q Consensus 699 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~- 777 (949)
+...++++||.+. +|...++..+.. ..+.++...+..|+.||+.|+.|||++ =|+||||||.|||+..+
T Consensus 100 -d~~v~l~fdYAEh-DL~~II~fHr~~-----~~~~lp~~mvKsilwQil~Gv~YLH~N---WvlHRDLKPaNIlvmgdg 169 (438)
T KOG0666|consen 100 -DKKVWLLFDYAEH-DLWHIIKFHRAS-----KAKQLPRSMVKSILWQILDGVHYLHSN---WVLHRDLKPANILVMGDG 169 (438)
T ss_pred -CceEEEEehhhhh-hHHHHHHHhccc-----hhccCCHHHHHHHHHHHHhhhHHHhhh---heeeccCCcceEEEeccC
Confidence 3478999999987 899998754332 235789999999999999999999988 79999999999999877
Q ss_pred ---CceEEeecccceecCCCCC-ccccccccCccCccCccccCCC-ccCCccchHHHHHHHHHHHhCCCCCcc
Q 039533 778 ---MTARVGDFGLARILSPDHT-QTSSFSVKGSLGYIAPEYGVGC-EVSTNGDVYSYGILLLELVIGKKPIDI 845 (949)
Q Consensus 778 ---~~~kl~DfG~a~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDiwSlGvvl~elltg~~Pf~~ 845 (949)
|.+||+|||+|+.+...-. ......++-|..|+|||.+.|. .|+.+.||||.|||+.||+|-++.|..
T Consensus 170 perG~VKIaDlGlaR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g 242 (438)
T KOG0666|consen 170 PERGRVKIADLGLARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKG 242 (438)
T ss_pred CccCeeEeecccHHHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccc
Confidence 9999999999998865543 2234467789999999998886 489999999999999999999998853
No 351
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=100.00 E-value=1.5e-32 Score=306.00 Aligned_cols=285 Identities=19% Similarity=0.221 Sum_probs=202.0
Q ss_pred HHHHHHHhcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCC--CcchHHHHHHHHHHHhcCCCcceeEEeeeecc
Q 039533 618 YQDLYNATSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQH--HGASRSFIAECKALKSIRHRNLVKVLTACLGA 695 (949)
Q Consensus 618 ~~~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~ 695 (949)
..++...+++|.+.+.||+|+||.||+|.+..+++.||+|++.... ....+.+.+|+.++++++||||+++++++...
T Consensus 9 ~~~~~~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~~ 88 (345)
T cd07877 9 NKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPA 88 (345)
T ss_pred HHHHhhccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeeeec
Confidence 4567778899999999999999999999998889999999986432 22245678899999999999999999987543
Q ss_pred cc-cCCccceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeee
Q 039533 696 DY-RGNDFKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLL 774 (949)
Q Consensus 696 ~~-~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll 774 (949)
.. ......+++++++ +++|.+++. ...+++..+..++.|+++||+|||+. +|+||||||+||++
T Consensus 89 ~~~~~~~~~~lv~~~~-~~~L~~~~~-----------~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIll 153 (345)
T cd07877 89 RSLEEFNDVYLVTHLM-GADLNNIVK-----------CQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAV 153 (345)
T ss_pred ccccccccEEEEehhc-ccCHHHHHh-----------cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChHHEEE
Confidence 21 2223467788876 789988875 23488999999999999999999977 89999999999999
Q ss_pred cCCCceEEeecccceecCCCCCccccccccCccCccCccccCC-CccCCccchHHHHHHHHHHHhCCCCCccccccCchh
Q 039533 775 DDYMTARVGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVG-CEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINL 853 (949)
Q Consensus 775 ~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~ 853 (949)
++++.+||+|||+++...... ....++..|+|||++.+ ..++.++|||||||++|||++|+.||....... ..
T Consensus 154 ~~~~~~kl~dfg~~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~-~~ 227 (345)
T cd07877 154 NEDCELKILDFGLARHTDDEM-----TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID-QL 227 (345)
T ss_pred cCCCCEEEecccccccccccc-----cccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-HH
Confidence 999999999999987643321 13457899999998766 467899999999999999999999995322110 11
Q ss_pred hhhcccc--CCCchhhhcccCCCCCchhhhhhhchhhhhhhh-hhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHH
Q 039533 854 HNFGRKA--LPDDVMDIVDSSLLPDDEDLILTGNQRQKQARI-NSIIECLISMVRIGVACSMELPQDRTNMTNVVHE 927 (949)
Q Consensus 854 ~~~~~~~--~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 927 (949)
....+.. .++.....+. ..............+...+ .........+.+++.+|++.||++||++.|+++.
T Consensus 228 ~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h 300 (345)
T cd07877 228 KLILRLVGTPGAELLKKIS----SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 300 (345)
T ss_pred HHHHHHhCCCCHHHHhhcc----cHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcC
Confidence 1100000 0000000000 0000000000000000000 0001234567899999999999999999998764
No 352
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=100.00 E-value=1.3e-32 Score=294.26 Aligned_cols=244 Identities=20% Similarity=0.230 Sum_probs=186.2
Q ss_pred CeeeeecCceEEEEEEcCCCEEEEEEEEecCCCc---chHHHHHHHHHH-HhcCCCcceeEEeeeecccccCCccceeEe
Q 039533 632 NLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHG---ASRSFIAECKAL-KSIRHRNLVKVLTACLGADYRGNDFKASVY 707 (949)
Q Consensus 632 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~---~~~~~~~E~~~l-~~l~h~niv~~~~~~~~~~~~~~~~~~lv~ 707 (949)
+.||+|+||.||+|.+..+++.||+|+++..... ....+..|..++ ...+|+|++++++++...+ ..++||
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~-----~~~lv~ 76 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKD-----YLYLVM 76 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCC-----eEEEEE
Confidence 5789999999999999888999999998644321 123344555444 4458999999999976444 789999
Q ss_pred eeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEeeccc
Q 039533 708 EFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVGDFGL 787 (949)
Q Consensus 708 e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~DfG~ 787 (949)
||+++++|.+++.. ...+++..+..++.|++.||.|||+. +++||||+|+||++++++.+||+|||.
T Consensus 77 e~~~~~~L~~~l~~----------~~~~~~~~~~~i~~qi~~aL~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~ 143 (260)
T cd05611 77 EYLNGGDCASLIKT----------LGGLPEDWAKQYIAEVVLGVEDLHQR---GIIHRDIKPENLLIDQTGHLKLTDFGL 143 (260)
T ss_pred eccCCCCHHHHHHH----------cCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCcEEEeeccc
Confidence 99999999999862 24578899999999999999999977 899999999999999999999999999
Q ss_pred ceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhccccCCCchhh
Q 039533 788 ARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKALPDDVMD 867 (949)
Q Consensus 788 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~ 867 (949)
++..... ....|+..|+|||...+..++.++||||||+++|||++|..||....... ... .
T Consensus 144 ~~~~~~~------~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~-~~~------------~ 204 (260)
T cd05611 144 SRNGLEN------KKFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPDA-VFD------------N 204 (260)
T ss_pred ceecccc------ccCCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCHHH-HHH------------H
Confidence 8764331 12348889999999988888999999999999999999999996332110 000 0
Q ss_pred hcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHH
Q 039533 868 IVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHEL 928 (949)
Q Consensus 868 ~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L 928 (949)
+....... +. .....++..+.+++.+|++.+|++||++.++.+.+
T Consensus 205 ~~~~~~~~-~~---------------~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~l 249 (260)
T cd05611 205 ILSRRINW-PE---------------EVKEFCSPEAVDLINRLLCMDPAKRLGANGYQEIK 249 (260)
T ss_pred HHhcccCC-CC---------------cccccCCHHHHHHHHHHccCCHHHccCCCcHHHHH
Confidence 00000000 00 00012356688999999999999999887665544
No 353
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=100.00 E-value=1.4e-32 Score=304.90 Aligned_cols=282 Identities=19% Similarity=0.163 Sum_probs=195.0
Q ss_pred CCCCCCeeeeecCceEEEEEEcCC--CEEEEEEEEecCCC--cchHHHHHHHHHHHhc-CCCcceeEEeeeecccccCCc
Q 039533 627 GFSSANLVGVGSFGSVYKGIIDEG--RTTIAVKVFNLQHH--GASRSFIAECKALKSI-RHRNLVKVLTACLGADYRGND 701 (949)
Q Consensus 627 ~y~~~~~lg~G~~g~Vy~~~~~~~--~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~ 701 (949)
+|++.+.||+|+||.||+|++... +..||+|++..... ...+.+.+|+++++++ +||||+++++++.... ....
T Consensus 1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~-~~~~ 79 (332)
T cd07857 1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFP-GNFN 79 (332)
T ss_pred CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeecc-ccCC
Confidence 478889999999999999999877 88999999864322 2245788899999999 5999999998754321 2334
Q ss_pred cceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceE
Q 039533 702 FKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTAR 781 (949)
Q Consensus 702 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~k 781 (949)
..++++||+. ++|.+++. ....+++..++.++.|++.||+|||+. +|+||||||+||++++++.+|
T Consensus 80 ~~~~~~e~~~-~~L~~~l~----------~~~~~~~~~~~~~~~qi~~aL~~LH~~---givH~dlkp~Nili~~~~~~k 145 (332)
T cd07857 80 ELYLYEELME-ADLHQIIR----------SGQPLTDAHFQSFIYQILCGLKYIHSA---NVLHRDLKPGNLLVNADCELK 145 (332)
T ss_pred cEEEEEeccc-CCHHHHHh----------cCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHeEEcCCCCEE
Confidence 5788889886 68998885 234588999999999999999999977 899999999999999999999
Q ss_pred EeecccceecCCCCCc--cccccccCccCccCccccCC-CccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhcc
Q 039533 782 VGDFGLARILSPDHTQ--TSSFSVKGSLGYIAPEYGVG-CEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGR 858 (949)
Q Consensus 782 l~DfG~a~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~-~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~ 858 (949)
|+|||.++........ .......|+..|+|||+..+ ..++.++||||+||++|+|++|+.||...... .......
T Consensus 146 l~Dfg~a~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~--~~~~~~~ 223 (332)
T cd07857 146 ICDFGLARGFSENPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYV--DQLNQIL 223 (332)
T ss_pred eCcCCCceecccccccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHH--HHHHHHH
Confidence 9999999876533221 11123458999999998765 46889999999999999999999998643211 0000000
Q ss_pred ccCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhh-HHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 039533 859 KALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINS-IIECLISMVRIGVACSMELPQDRTNMTNVVH 926 (949)
Q Consensus 859 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 926 (949)
........+.+......... .........+...+.. .......+.+++.+|++.||++|||+.|+++
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~ 291 (332)
T cd07857 224 QVLGTPDEETLSRIGSPKAQ-NYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEALE 291 (332)
T ss_pred HHhCCCCHHHHHhhhhhhHH-HHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 00000000000000000000 0000000000000000 0122457889999999999999999999864
No 354
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=100.00 E-value=2.1e-32 Score=298.33 Aligned_cols=277 Identities=23% Similarity=0.246 Sum_probs=194.2
Q ss_pred cCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCC--cchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCccc
Q 039533 626 SGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHH--GASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFK 703 (949)
Q Consensus 626 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 703 (949)
++|++.+.||+|++|.||+|.+..+++.||+|+++.... ...+.+.+|++++++++||||+++++++.... ..
T Consensus 2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-----~~ 76 (294)
T PLN00009 2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEK-----RL 76 (294)
T ss_pred CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecCC-----eE
Confidence 578999999999999999999988899999999864432 23457889999999999999999999976544 79
Q ss_pred eeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecC-CCceEE
Q 039533 704 ASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDD-YMTARV 782 (949)
Q Consensus 704 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~-~~~~kl 782 (949)
++||||++ +++.+++... ....+++..+..++.|++.||+|||++ +++||||+|+||+++. ++.+||
T Consensus 77 ~lv~e~~~-~~l~~~~~~~--------~~~~~~~~~~~~~~~qi~~aL~~LH~~---~i~H~dl~p~nill~~~~~~~kl 144 (294)
T PLN00009 77 YLVFEYLD-LDLKKHMDSS--------PDFAKNPRLIKTYLYQILRGIAYCHSH---RVLHRDLKPQNLLIDRRTNALKL 144 (294)
T ss_pred EEEEeccc-ccHHHHHHhC--------CCCCcCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCcceEEEECCCCEEEE
Confidence 99999996 5888877521 123357888889999999999999977 8999999999999985 567999
Q ss_pred eecccceecCCCCCccccccccCccCccCccccCCC-ccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhccccC
Q 039533 783 GDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGC-EVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKAL 861 (949)
Q Consensus 783 ~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~ 861 (949)
+|||++.......... ....++..|+|||++.+. .++.++||||+||++|+|+||+.||......+. ...... ..
T Consensus 145 ~dfg~~~~~~~~~~~~--~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~-~~~~~~-~~ 220 (294)
T PLN00009 145 ADFGLARAFGIPVRTF--THEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDE-LFKIFR-IL 220 (294)
T ss_pred cccccccccCCCcccc--ccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHH-Hh
Confidence 9999997654332111 123478899999987664 578999999999999999999999964322111 000000 00
Q ss_pred CCchhhhcccCC-CCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 039533 862 PDDVMDIVDSSL-LPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVH 926 (949)
Q Consensus 862 ~~~~~~~~d~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 926 (949)
........+... .++.. ..................+.++.+++.+|++.+|++||++.|+++
T Consensus 221 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~ 283 (294)
T PLN00009 221 GTPNEETWPGVTSLPDYK---SAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALE 283 (294)
T ss_pred CCCChhhccccccchhhh---hhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhc
Confidence 000000000000 00000 000000000000001123456889999999999999999999986
No 355
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=100.00 E-value=2.8e-32 Score=290.53 Aligned_cols=248 Identities=25% Similarity=0.331 Sum_probs=199.8
Q ss_pred CCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCC--cchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCccce
Q 039533 627 GFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHH--GASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFKA 704 (949)
Q Consensus 627 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 704 (949)
+|++.+.||+|++|.||+|++..+++.||+|.+..... ...+.+.+|++++++++|+|++++++++.... ..+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~-----~~~ 75 (254)
T cd06627 1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSD-----SLY 75 (254)
T ss_pred CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCC-----EEE
Confidence 57889999999999999999988889999999976543 34567899999999999999999999876543 789
Q ss_pred eEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEee
Q 039533 705 SVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVGD 784 (949)
Q Consensus 705 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~D 784 (949)
+||||+++++|.+++.. ...+++..+..++.|++.|+.|||+. +|+||||||+||+++.++.++|+|
T Consensus 76 ~v~e~~~~~~L~~~~~~----------~~~l~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~~l~d 142 (254)
T cd06627 76 IILEYAENGSLRQIIKK----------FGPFPESLVAVYVYQVLQGLAYLHEQ---GVIHRDIKAANILTTKDGVVKLAD 142 (254)
T ss_pred EEEecCCCCcHHHHHHh----------ccCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCHHHEEECCCCCEEEec
Confidence 99999999999999862 24689999999999999999999977 999999999999999999999999
Q ss_pred cccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhccccCCCc
Q 039533 785 FGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKALPDD 864 (949)
Q Consensus 785 fG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~ 864 (949)
||.+.......... ....++..|+|||...+..++.++||||+|+++|+|++|+.||....... ...
T Consensus 143 ~~~~~~~~~~~~~~--~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~~----~~~------- 209 (254)
T cd06627 143 FGVATKLNDVSKDD--ASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNPMA----ALF------- 209 (254)
T ss_pred cccceecCCCcccc--cccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccHHH----HHH-------
Confidence 99998765543321 23458899999999888788999999999999999999999986332110 000
Q ss_pred hhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 039533 865 VMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVH 926 (949)
Q Consensus 865 ~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 926 (949)
....... ... ....+..+.+++.+|+..+|++||++.|++.
T Consensus 210 --~~~~~~~-~~~------------------~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~ 250 (254)
T cd06627 210 --RIVQDDH-PPL------------------PEGISPELKDFLMQCFQKDPNLRPTAKQLLK 250 (254)
T ss_pred --HHhccCC-CCC------------------CCCCCHHHHHHHHHHHhCChhhCcCHHHHhc
Confidence 0000000 000 0122456789999999999999999999874
No 356
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=100.00 E-value=2.9e-32 Score=291.96 Aligned_cols=243 Identities=23% Similarity=0.298 Sum_probs=191.3
Q ss_pred eeeecCceEEEEEEcCCCEEEEEEEEecCCC---cchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCccceeEeeec
Q 039533 634 VGVGSFGSVYKGIIDEGRTTIAVKVFNLQHH---GASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFKASVYEFM 710 (949)
Q Consensus 634 lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~ 710 (949)
||.|++|.||+|++..+++.||+|++..... ...+.+.+|+.++++++||||+++++++.+.. ..++||||+
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-----~~~lv~e~~ 75 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKK-----YIYMLMEYC 75 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCC-----ccEEEEecC
Confidence 6899999999999998899999999874332 33467899999999999999999999875443 789999999
Q ss_pred cCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEeeccccee
Q 039533 711 HYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVGDFGLARI 790 (949)
Q Consensus 711 ~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~DfG~a~~ 790 (949)
++++|.+++.. ...++...+..++.|++.||+|||++ +++|+||+|+||+++.++.++|+|||.++.
T Consensus 76 ~~~~L~~~l~~----------~~~l~~~~~~~~~~~i~~~l~~lH~~---~~~h~dl~~~nilv~~~~~~~l~df~~~~~ 142 (262)
T cd05572 76 LGGELWTILRD----------RGLFDEYTARFYIACVVLAFEYLHNR---GIIYRDLKPENLLLDSNGYVKLVDFGFAKK 142 (262)
T ss_pred CCCcHHHHHhh----------cCCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCHHHEEEcCCCCEEEeeCCcccc
Confidence 99999999962 23478899999999999999999977 999999999999999999999999999987
Q ss_pred cCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhccccCCCchhhhcc
Q 039533 791 LSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKALPDDVMDIVD 870 (949)
Q Consensus 791 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~d 870 (949)
...... .....++..|+|||.+.+..++.++|+||+|+++|||++|+.||.......... ...+.+
T Consensus 143 ~~~~~~---~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~-----------~~~~~~ 208 (262)
T cd05572 143 LKSGQK---TWTFCGTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDEDPMEI-----------YNDILK 208 (262)
T ss_pred cCcccc---cccccCCcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCHHHH-----------HHHHhc
Confidence 654321 123458899999999888889999999999999999999999996432111000 001110
Q ss_pred cCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCC-----HHHHHH
Q 039533 871 SSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTN-----MTNVVH 926 (949)
Q Consensus 871 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs-----~~ev~~ 926 (949)
...... .....+..+.+++.+||+.+|++||+ ++|+++
T Consensus 209 ~~~~~~------------------~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~ 251 (262)
T cd05572 209 GNGKLE------------------FPNYIDKAAKDLIKQLLRRNPEERLGNLKGGIKDIKK 251 (262)
T ss_pred cCCCCC------------------CCcccCHHHHHHHHHHccCChhhCcCCcccCHHHHhc
Confidence 000000 00122456899999999999999999 555544
No 357
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=100.00 E-value=1e-32 Score=307.14 Aligned_cols=284 Identities=19% Similarity=0.226 Sum_probs=197.6
Q ss_pred hcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCCcchHHHHHHHHHHHhcCCCcceeEEeeeeccccc------
Q 039533 625 TSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHGASRSFIAECKALKSIRHRNLVKVLTACLGADYR------ 698 (949)
Q Consensus 625 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~------ 698 (949)
..+|.+.+.||.|+||.||+|.+..+++.||+|++........+.+.+|++++++++||||+++++++......
T Consensus 4 ~~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~ 83 (342)
T cd07854 4 GSRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVG 83 (342)
T ss_pred CcceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcCCCcchhhHhhhcccccccccccc
Confidence 36899999999999999999999988999999999766655667789999999999999999999876543211
Q ss_pred ---CCccceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeec
Q 039533 699 ---GNDFKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLD 775 (949)
Q Consensus 699 ---~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~ 775 (949)
.....++||||++ ++|.+++. ...+++..++.++.|++.||.|||+. +|+||||||+||+++
T Consensus 84 ~~~~~~~~~lv~e~~~-~~L~~~~~-----------~~~l~~~~~~~~~~qi~~aL~~LH~~---givH~dikp~Nili~ 148 (342)
T cd07854 84 SLTELNSVYIVQEYME-TDLANVLE-----------QGPLSEEHARLFMYQLLRGLKYIHSA---NVLHRDLKPANVFIN 148 (342)
T ss_pred cccccceEEEEeeccc-ccHHHHHH-----------cCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEc
Confidence 1235789999997 58988874 23478899999999999999999977 899999999999997
Q ss_pred -CCCceEEeecccceecCCCCCcc-ccccccCccCccCccccCC-CccCCccchHHHHHHHHHHHhCCCCCccccccCch
Q 039533 776 -DYMTARVGDFGLARILSPDHTQT-SSFSVKGSLGYIAPEYGVG-CEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDIN 852 (949)
Q Consensus 776 -~~~~~kl~DfG~a~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~-~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~ 852 (949)
+++.+|++|||.++......... ......++..|+|||++.+ ..++.++|||||||++|||++|+.||........
T Consensus 149 ~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~- 227 (342)
T cd07854 149 TEDLVLKIGDFGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQ- 227 (342)
T ss_pred CCCceEEECCcccceecCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH-
Confidence 55678999999998654322211 1112347889999997654 4678899999999999999999999964322110
Q ss_pred hhhhccccCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 039533 853 LHNFGRKALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVH 926 (949)
Q Consensus 853 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 926 (949)
....... .+....+.........+ +......................++.+++.+|++.||++|||+.|+++
T Consensus 228 ~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~ 299 (342)
T cd07854 228 MQLILES-VPVVREEDRNELLNVIP-SFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALM 299 (342)
T ss_pred HHHHHHh-cCCCChHHhhhhhhhhh-hhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhC
Confidence 0000000 00000000000000000 000000000000000001123456889999999999999999999984
No 358
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=100.00 E-value=1.6e-32 Score=292.76 Aligned_cols=250 Identities=24% Similarity=0.311 Sum_probs=200.1
Q ss_pred CCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCC--CcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCccce
Q 039533 627 GFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQH--HGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFKA 704 (949)
Q Consensus 627 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 704 (949)
+|++.+.||+|++|.||+|.+..+++.+|+|++.... ......+.+|++++++++|+||+++++++... ...+
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~-----~~~~ 75 (256)
T cd08530 1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDG-----NKLC 75 (256)
T ss_pred CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccC-----CEEE
Confidence 5888999999999999999998889999999987543 23345778899999999999999999886544 4789
Q ss_pred eEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEee
Q 039533 705 SVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVGD 784 (949)
Q Consensus 705 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~D 784 (949)
+||||+++++|.+++.... .....+++..+..++.|++.|++|||+. +++||||+|+||++++++.+||+|
T Consensus 76 ~v~e~~~~~~L~~~~~~~~------~~~~~~~~~~~~~~~~~l~~al~~lh~~---~i~h~~l~~~ni~~~~~~~~kl~d 146 (256)
T cd08530 76 IVMEYAPFGDLSKAISKRK------KKRKLIPEQEIWRIFIQLLRGLQALHEQ---KILHRDLKSANILLVANDLVKIGD 146 (256)
T ss_pred EEehhcCCCCHHHHHHHHH------hhcCCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCcceEEEecCCcEEEee
Confidence 9999999999999986311 1235688999999999999999999977 999999999999999999999999
Q ss_pred cccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhccccCCCc
Q 039533 785 FGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKALPDD 864 (949)
Q Consensus 785 fG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~ 864 (949)
||.++........ ...++..|+|||.+.+..++.++|+||+|+++|||++|+.||...... .+...
T Consensus 147 ~g~~~~~~~~~~~----~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~--~~~~~-------- 212 (256)
T cd08530 147 LGISKVLKKNMAK----TQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQ--DLRYK-------- 212 (256)
T ss_pred ccchhhhccCCcc----cccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--HHHHH--------
Confidence 9999876554211 234788999999999888999999999999999999999998633211 00000
Q ss_pred hhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 039533 865 VMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVH 926 (949)
Q Consensus 865 ~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 926 (949)
+.....+. .....+..+.+++.+|++.+|++||++.|+++
T Consensus 213 ----~~~~~~~~------------------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~ 252 (256)
T cd08530 213 ----VQRGKYPP------------------IPPIYSQDLQNFIRSMLQVKPKLRPNCDKILA 252 (256)
T ss_pred ----HhcCCCCC------------------CchhhCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 00000000 01134556899999999999999999999975
No 359
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=100.00 E-value=2.3e-32 Score=295.22 Aligned_cols=245 Identities=23% Similarity=0.246 Sum_probs=188.6
Q ss_pred eeeecCceEEEEEEcCCCEEEEEEEEecCC---CcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCccceeEeeec
Q 039533 634 VGVGSFGSVYKGIIDEGRTTIAVKVFNLQH---HGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFKASVYEFM 710 (949)
Q Consensus 634 lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~ 710 (949)
||+|+||+||+|.+..+++.||+|++.... ......+.+|++++++++||||+++++++...+ ..++||||+
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~-----~~~lv~e~~ 75 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKD-----DLCLVMTLM 75 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCC-----eEEEEEecC
Confidence 689999999999998889999999986432 222345678999999999999999998865443 789999999
Q ss_pred cCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEeeccccee
Q 039533 711 HYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVGDFGLARI 790 (949)
Q Consensus 711 ~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~DfG~a~~ 790 (949)
++++|.+++... ....+++.++..++.|++.|+.|||+. +++||||+|+||++++++.+||+|||.+..
T Consensus 76 ~~~~L~~~l~~~--------~~~~~~~~~~~~~~~ql~~~l~~lH~~---~i~H~di~p~Nil~~~~~~~~l~dfg~~~~ 144 (277)
T cd05577 76 NGGDLKYHIYNV--------GEPGFPEARAIFYAAQIICGLEHLHQR---RIVYRDLKPENVLLDDHGNVRISDLGLAVE 144 (277)
T ss_pred CCCcHHHHHHHc--------CcCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEccCcchhh
Confidence 999999998621 123588999999999999999999977 999999999999999999999999999876
Q ss_pred cCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhccccCCCchhhhcc
Q 039533 791 LSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKALPDDVMDIVD 870 (949)
Q Consensus 791 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~d 870 (949)
....... ....++..|+|||++.+..++.++||||+||++|+|++|+.||....... .... +.....
T Consensus 145 ~~~~~~~---~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-~~~~---------~~~~~~ 211 (277)
T cd05577 145 LKGGKKI---KGRAGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKV-EKEE---------LKRRTL 211 (277)
T ss_pred hccCCcc---ccccCCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCcccc-cHHH---------HHhccc
Confidence 5432221 13457889999999988889999999999999999999999996432110 0000 000000
Q ss_pred cCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCC-----CHHHHHH
Q 039533 871 SSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRT-----NMTNVVH 926 (949)
Q Consensus 871 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----s~~ev~~ 926 (949)
.... ......+..+.+++.+|++.+|++|| ++.++++
T Consensus 212 ~~~~-------------------~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~ 253 (277)
T cd05577 212 EMAV-------------------EYPDKFSPEAKDLCEALLQKDPEKRLGCRGGSADEVRE 253 (277)
T ss_pred cccc-------------------cCCccCCHHHHHHHHHHccCChhHccCCCcccHHHHHh
Confidence 0000 00012245678999999999999999 5555543
No 360
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=100.00 E-value=5.2e-32 Score=298.25 Aligned_cols=270 Identities=20% Similarity=0.214 Sum_probs=186.3
Q ss_pred cCceEEEEEEcCCCEEEEEEEEecC--CCcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCccceeEeeeccCCCh
Q 039533 638 SFGSVYKGIIDEGRTTIAVKVFNLQ--HHGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFKASVYEFMHYGSL 715 (949)
Q Consensus 638 ~~g~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~gsL 715 (949)
++|.||.++...+++.||||+++.. .....+.+.+|++++++++|+||+++++++...+ ..+++|||+++++|
T Consensus 12 ~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~-----~~~~~~e~~~~~~l 86 (314)
T cd08216 12 DLMIVHLAKHKPTNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDS-----ELYVVSPLMAYGSC 86 (314)
T ss_pred CCceEEEEEecCCCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecCC-----eEEEEEeccCCCCH
Confidence 4455666666667899999999754 2334568999999999999999999999876544 78999999999999
Q ss_pred hhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEeecccceecCCCC
Q 039533 716 EEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVGDFGLARILSPDH 795 (949)
Q Consensus 716 ~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~~ 795 (949)
.+++... ....+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||.+.......
T Consensus 87 ~~~l~~~--------~~~~~~~~~~~~~~~~l~~~L~~LH~~---~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~ 155 (314)
T cd08216 87 EDLLKTH--------FPEGLPELAIAFILKDVLNALDYIHSK---GFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHG 155 (314)
T ss_pred HHHHHHh--------cccCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCcceEEEecCCceEEecCccceeecccc
Confidence 9998632 123478889999999999999999977 89999999999999999999999999887653221
Q ss_pred C-----ccccccccCccCccCccccCC--CccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhccccCC----Cc
Q 039533 796 T-----QTSSFSVKGSLGYIAPEYGVG--CEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKALP----DD 864 (949)
Q Consensus 796 ~-----~~~~~~~~gt~~y~aPE~~~~--~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~----~~ 864 (949)
. ........++..|+|||++.+ ..++.++|||||||++|||++|+.||.......... .......+ ..
T Consensus 156 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~~~-~~~~~~~~~~~~~~ 234 (314)
T cd08216 156 KRQRVVHDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQMLL-EKVRGTVPCLLDKS 234 (314)
T ss_pred ccccccccccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHH-HHHhccCccccccC
Confidence 1 111123347788999999876 358899999999999999999999997432211111 00000000 00
Q ss_pred hhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 039533 865 VMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVH 926 (949)
Q Consensus 865 ~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 926 (949)
................ ....................+.+++.+||+.||++|||++|+++
T Consensus 235 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~ 294 (314)
T cd08216 235 TYPLYEDSMSQSRSSN--EHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLN 294 (314)
T ss_pred chhhhcCCcCcccccc--cccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhc
Confidence 0000000000000000 00000000001111233457889999999999999999999986
No 361
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=100.00 E-value=2.3e-32 Score=300.71 Aligned_cols=284 Identities=19% Similarity=0.218 Sum_probs=197.4
Q ss_pred hcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCC--cchHHHHHHHHHHHhcCCCcceeEEeeeecccc---cC
Q 039533 625 TSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHH--GASRSFIAECKALKSIRHRNLVKVLTACLGADY---RG 699 (949)
Q Consensus 625 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~---~~ 699 (949)
.++|++.+.||+|+||.||+|++..+++.||+|++..... .....+.+|++++++++||||+++++++..... ..
T Consensus 7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 86 (311)
T cd07866 7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRK 86 (311)
T ss_pred cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheeccccccccc
Confidence 5789999999999999999999998899999999864432 223467889999999999999999988754331 12
Q ss_pred CccceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCc
Q 039533 700 NDFKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMT 779 (949)
Q Consensus 700 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~ 779 (949)
....++||||+.+ ++.+.+.. ....+++.++..++.|+++||+|||+. +|+||||||+||++++++.
T Consensus 87 ~~~~~lv~~~~~~-~l~~~~~~---------~~~~~~~~~~~~i~~~l~~al~~lH~~---~i~H~dl~p~nil~~~~~~ 153 (311)
T cd07866 87 RGSVYMVTPYMDH-DLSGLLEN---------PSVKLTESQIKCYMLQLLEGINYLHEN---HILHRDIKAANILIDNQGI 153 (311)
T ss_pred CceEEEEEecCCc-CHHHHHhc---------cccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCC
Confidence 3457899999965 67776652 234589999999999999999999977 8999999999999999999
Q ss_pred eEEeecccceecCCCCCcc---------ccccccCccCccCccccCCC-ccCCccchHHHHHHHHHHHhCCCCCcccccc
Q 039533 780 ARVGDFGLARILSPDHTQT---------SSFSVKGSLGYIAPEYGVGC-EVSTNGDVYSYGILLLELVIGKKPIDIMFEG 849 (949)
Q Consensus 780 ~kl~DfG~a~~~~~~~~~~---------~~~~~~gt~~y~aPE~~~~~-~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~ 849 (949)
+||+|||+++......... ......++..|+|||++.+. .++.++|||||||++|||++|++||......
T Consensus 154 ~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~ 233 (311)
T cd07866 154 LKIADFGLARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDI 233 (311)
T ss_pred EEECcCccchhccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHH
Confidence 9999999997654332211 11233578889999987654 5789999999999999999999999643221
Q ss_pred Cc--hhhhhccccCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 039533 850 DI--NLHNFGRKALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVH 926 (949)
Q Consensus 850 ~~--~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 926 (949)
.. ..........+...... +. +.................. ........+.+++.+|++.||++|||+.|++.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~ 307 (311)
T cd07866 234 DQLHLIFKLCGTPTEETWPGW-RS-LPGCEGVHSFTNYPRTLEE---RFGKLGPEGLDLLSKLLSLDPYKRLTASDALE 307 (311)
T ss_pred HHHHHHHHHhCCCChhhchhh-hh-cccccccccCCCCCccHHH---HcccCChhHHHHHHHHcccCcccCcCHHHHhc
Confidence 10 00000000000000000 00 0000000000000000000 11122356889999999999999999999875
No 362
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=99.98 E-value=1.3e-32 Score=306.39 Aligned_cols=280 Identities=18% Similarity=0.202 Sum_probs=199.3
Q ss_pred HhcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCC--CcchHHHHHHHHHHHhcCCCcceeEEeeeecccc-cCC
Q 039533 624 ATSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQH--HGASRSFIAECKALKSIRHRNLVKVLTACLGADY-RGN 700 (949)
Q Consensus 624 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~-~~~ 700 (949)
..++|++.+.||+|++|.||+|++..+++.||+|++.... ....+.+.+|+.++++++|||++++++++...+. ...
T Consensus 13 ~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 92 (343)
T cd07851 13 VPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDF 92 (343)
T ss_pred ccCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhcccccccc
Confidence 4678999999999999999999999889999999986432 2233567789999999999999999887654432 222
Q ss_pred ccceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCce
Q 039533 701 DFKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTA 780 (949)
Q Consensus 701 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~ 780 (949)
...++|+||+ +++|.+++. ...+++..+..++.|+++||+|||+. +|+||||||+||++++++.+
T Consensus 93 ~~~~lv~e~~-~~~L~~~~~-----------~~~l~~~~~~~~~~ql~~aL~~LH~~---gi~H~dlkp~Nill~~~~~~ 157 (343)
T cd07851 93 QDVYLVTHLM-GADLNNIVK-----------CQKLSDDHIQFLVYQILRGLKYIHSA---GIIHRDLKPSNIAVNEDCEL 157 (343)
T ss_pred ccEEEEEecC-CCCHHHHHh-----------cCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCE
Confidence 3479999998 679999886 13589999999999999999999977 89999999999999999999
Q ss_pred EEeecccceecCCCCCccccccccCccCccCccccCC-CccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhccc
Q 039533 781 RVGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVG-CEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRK 859 (949)
Q Consensus 781 kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~ 859 (949)
||+|||.+....... ....++..|+|||.+.+ ..++.++|||||||++||+++|+.||....... .+... ..
T Consensus 158 kL~dfg~~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~-~~~~i-~~ 230 (343)
T cd07851 158 KILDFGLARHTDDEM-----TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHID-QLKRI-MN 230 (343)
T ss_pred EEccccccccccccc-----cCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHH-HHHHH-HH
Confidence 999999998654331 12357889999998765 367899999999999999999999996332110 00000 00
Q ss_pred cCCCchhhhcccCCCCCchhhhhhhchhhhhhhhh-hHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 039533 860 ALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARIN-SIIECLISMVRIGVACSMELPQDRTNMTNVVH 926 (949)
Q Consensus 860 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 926 (949)
.......++.......... .............+. ........+.+++.+|++.+|++|||+.||++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~ 297 (343)
T cd07851 231 LVGTPDEELLQKISSESAR-NYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALA 297 (343)
T ss_pred hcCCCCHHHHhhccchhHH-HHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhc
Confidence 0000000111100000000 000000000000111 11123567899999999999999999999875
No 363
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=99.98 E-value=6e-32 Score=291.87 Aligned_cols=242 Identities=21% Similarity=0.221 Sum_probs=183.2
Q ss_pred eeeeecCceEEEEEEcCCCEEEEEEEEecCCCc---chHHHHHHHHH---HHhcCCCcceeEEeeeecccccCCccceeE
Q 039533 633 LVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHG---ASRSFIAECKA---LKSIRHRNLVKVLTACLGADYRGNDFKASV 706 (949)
Q Consensus 633 ~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~---~~~~~~~E~~~---l~~l~h~niv~~~~~~~~~~~~~~~~~~lv 706 (949)
.||+|+||.||+|.+..+++.||+|.+...... ....+..|..+ ++...||+|+++++++...+ ..++|
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-----~~~~v 75 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPD-----KLSFI 75 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCC-----EEEEE
Confidence 489999999999999888999999998754221 12233444443 44457999999998865444 78999
Q ss_pred eeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEeecc
Q 039533 707 YEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVGDFG 786 (949)
Q Consensus 707 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~DfG 786 (949)
|||+++++|.+++. ....+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||
T Consensus 76 ~e~~~g~~L~~~l~----------~~~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~di~p~nili~~~~~~kl~dfg 142 (278)
T cd05606 76 LDLMNGGDLHYHLS----------QHGVFSEAEMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLG 142 (278)
T ss_pred EecCCCCcHHHHHH----------hcCCCCHHHHHHHHHHHHHHHHHHHHC---CEEcCCCCHHHEEECCCCCEEEccCc
Confidence 99999999999885 234589999999999999999999977 89999999999999999999999999
Q ss_pred cceecCCCCCccccccccCccCccCccccCCC-ccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhccccCCCch
Q 039533 787 LARILSPDHTQTSSFSVKGSLGYIAPEYGVGC-EVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKALPDDV 865 (949)
Q Consensus 787 ~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~ 865 (949)
.+........ ....|+..|+|||++.+. .++.++||||+||++|||++|+.||..............
T Consensus 143 ~~~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~~~~~-------- 210 (278)
T cd05606 143 LACDFSKKKP----HASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRM-------- 210 (278)
T ss_pred CccccCccCC----cCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHHHHHH--------
Confidence 9876543222 123589999999998754 688999999999999999999999964321110000000
Q ss_pred hhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCC-----CHHHHHH
Q 039533 866 MDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRT-----NMTNVVH 926 (949)
Q Consensus 866 ~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----s~~ev~~ 926 (949)
....+..+ ....+..+.+++.+|+..+|++|| ++.|+++
T Consensus 211 ~~~~~~~~----------------------~~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~ 254 (278)
T cd05606 211 TLTMAVEL----------------------PDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE 254 (278)
T ss_pred hhccCCCC----------------------CCcCCHHHHHHHHHHhhcCHHhccCCCCCCHHHHHh
Confidence 00000000 012245678999999999999999 9999975
No 364
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=99.98 E-value=3.8e-32 Score=296.54 Aligned_cols=254 Identities=21% Similarity=0.245 Sum_probs=192.3
Q ss_pred hcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCC-cchHHHHHHHHHHHhc-CCCcceeEEeeeecccccCCcc
Q 039533 625 TSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHH-GASRSFIAECKALKSI-RHRNLVKVLTACLGADYRGNDF 702 (949)
Q Consensus 625 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~ 702 (949)
.++|++.+.||+|++|.||+|.+..+++.||||+++.... .....+..|+.++.+. .||||+++++++.... .
T Consensus 14 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~-----~ 88 (296)
T cd06618 14 LNDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFITDS-----D 88 (296)
T ss_pred cchheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeecCC-----e
Confidence 4678899999999999999999988899999999975432 2335566777777676 4999999999986544 7
Q ss_pred ceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEE
Q 039533 703 KASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARV 782 (949)
Q Consensus 703 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl 782 (949)
.++||||+. +++.+++.. ....+++..+..++.|++.|++|||+.. +|+||||+|+||++++++.+||
T Consensus 89 ~~~v~e~~~-~~l~~l~~~---------~~~~l~~~~~~~i~~~i~~~l~~lH~~~--~i~H~dl~p~nill~~~~~~kL 156 (296)
T cd06618 89 VFICMELMS-TCLDKLLKR---------IQGPIPEDILGKMTVAIVKALHYLKEKH--GVIHRDVKPSNILLDASGNVKL 156 (296)
T ss_pred EEEEeeccC-cCHHHHHHH---------hcCCCCHHHHHHHHHHHHHHHHHHHhhC--CEecCCCcHHHEEEcCCCCEEE
Confidence 899999985 477776642 1236889999999999999999999632 8999999999999999999999
Q ss_pred eecccceecCCCCCccccccccCccCccCccccCCCc----cCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhcc
Q 039533 783 GDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCE----VSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGR 858 (949)
Q Consensus 783 ~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~----~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~ 858 (949)
+|||.+.......... ...++..|+|||++.+.. ++.++||||||+++|||++|+.||.........+.
T Consensus 157 ~dfg~~~~~~~~~~~~---~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~---- 229 (296)
T cd06618 157 CDFGISGRLVDSKAKT---RSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTEFEVLT---- 229 (296)
T ss_pred CccccchhccCCCccc---CCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhHHHHHH----
Confidence 9999987654333221 234788999999987553 78999999999999999999999864211110000
Q ss_pred ccCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHH
Q 039533 859 KALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHE 927 (949)
Q Consensus 859 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 927 (949)
..+.......+ ....++.++.+++.+|++.||++||++.++++.
T Consensus 230 --------~~~~~~~~~~~-----------------~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~ 273 (296)
T cd06618 230 --------KILQEEPPSLP-----------------PNEGFSPDFCSFVDLCLTKDHRKRPKYRELLQH 273 (296)
T ss_pred --------HHhcCCCCCCC-----------------CCCCCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 11110000000 000234568899999999999999999999765
No 365
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=99.98 E-value=4.3e-32 Score=294.23 Aligned_cols=272 Identities=21% Similarity=0.208 Sum_probs=194.7
Q ss_pred CCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCCc-chHHHHHHHHHHHhcC-CCcceeEEeeeecccccCCcccee
Q 039533 628 FSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHG-ASRSFIAECKALKSIR-HRNLVKVLTACLGADYRGNDFKAS 705 (949)
Q Consensus 628 y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~~~~~l 705 (949)
|++.+.||+|++|+||+|+...+++.||||++...... ......+|+..+++++ |+|++++++++... +..++
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~-----~~~~l 75 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFREN-----DELYF 75 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhcC-----CcEEE
Confidence 67789999999999999999888899999998644322 2234567999999998 99999999987553 48899
Q ss_pred EeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEeec
Q 039533 706 VYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVGDF 785 (949)
Q Consensus 706 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~Df 785 (949)
||||+ +|+|.+++... ....+++.++..++.|++.||.|||++ +++|+||+|+||++++++.++|+||
T Consensus 76 v~e~~-~~~l~~~~~~~--------~~~~~~~~~~~~~~~~l~~~l~~Lh~~---~i~H~dl~~~ni~i~~~~~~~l~d~ 143 (283)
T cd07830 76 VFEYM-EGNLYQLMKDR--------KGKPFSESVIRSIIYQILQGLAHIHKH---GFFHRDLKPENLLVSGPEVVKIADF 143 (283)
T ss_pred EEecC-CCCHHHHHHhc--------ccccCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEEcCCCCEEEeec
Confidence 99999 78999988621 124689999999999999999999977 8999999999999999999999999
Q ss_pred ccceecCCCCCccccccccCccCccCccccCC-CccCCccchHHHHHHHHHHHhCCCCCccccccCch--hhhhccccCC
Q 039533 786 GLARILSPDHTQTSSFSVKGSLGYIAPEYGVG-CEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDIN--LHNFGRKALP 862 (949)
Q Consensus 786 G~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~--~~~~~~~~~~ 862 (949)
|.++......... ...++..|+|||++.+ ..++.++||||||+++|||++|+.||......+.. ..........
T Consensus 144 ~~~~~~~~~~~~~---~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (283)
T cd07830 144 GLAREIRSRPPYT---DYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTK 220 (283)
T ss_pred ccceeccCCCCcC---CCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCCh
Confidence 9998765432221 2447889999998754 45789999999999999999999998543221110 0000000000
Q ss_pred Cchhhh--cccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 039533 863 DDVMDI--VDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVH 926 (949)
Q Consensus 863 ~~~~~~--~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 926 (949)
+...+. .+...... ......... ..........+.+++.+|++.+|++|||++|++.
T Consensus 221 ~~~~~~~~~~~~~~~~----~~~~~~~~~---~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~ 279 (283)
T cd07830 221 QDWPEGYKLASKLGFR----FPQFAPTSL---HQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQ 279 (283)
T ss_pred hhhhhHhhhhcccccc----ccccccccH---HHHcccCCHHHHHHHHHhcccCcccCCCHHHHhh
Confidence 000000 00000000 000000000 0001122466889999999999999999999875
No 366
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=99.98 E-value=2e-32 Score=293.56 Aligned_cols=247 Identities=22% Similarity=0.296 Sum_probs=192.3
Q ss_pred eeeecCceEEEEEEcCCCEEEEEEEEecCCC---cchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCccceeEeeec
Q 039533 634 VGVGSFGSVYKGIIDEGRTTIAVKVFNLQHH---GASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFKASVYEFM 710 (949)
Q Consensus 634 lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~ 710 (949)
||+|+||.||+|++..+++.||+|++..... ...+.+.+|++++++++||||+++++.+.. ....++||||+
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-----~~~~~lv~e~~ 75 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQG-----KKNLYLVMEYL 75 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheec-----CcEEEEEEecC
Confidence 6899999999999998899999999865433 344678899999999999999999887643 34789999999
Q ss_pred cCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEeeccccee
Q 039533 711 HYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVGDFGLARI 790 (949)
Q Consensus 711 ~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~DfG~a~~ 790 (949)
++++|.+++.. ...+++..+..++.|+++||+|||+. +++||||+|+||++++++.++|+|||++..
T Consensus 76 ~~~~L~~~l~~----------~~~~~~~~~~~i~~qi~~~L~~lH~~---~i~H~di~~~nil~~~~~~~~l~dfg~~~~ 142 (265)
T cd05579 76 PGGDLASLLEN----------VGSLDEDVARIYIAEIVLALEYLHSN---GIIHRDLKPDNILIDSNGHLKLTDFGLSKV 142 (265)
T ss_pred CCCcHHHHHHH----------cCCCCHHHHHHHHHHHHHHHHHHHHc---CeecCCCCHHHeEEcCCCCEEEEecccchh
Confidence 99999999962 23588999999999999999999977 899999999999999999999999999876
Q ss_pred cCCCCCc------cccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhccccCCCc
Q 039533 791 LSPDHTQ------TSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKALPDD 864 (949)
Q Consensus 791 ~~~~~~~------~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~ 864 (949)
....... .......++..|+|||...+...+.++||||||+++||+++|+.||....... .
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~--~----------- 209 (265)
T cd05579 143 GLVRRQINLNDDEKEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETPEE--I----------- 209 (265)
T ss_pred cccCcccccccccccccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHH--H-----------
Confidence 5433211 11123457889999999988889999999999999999999999986332110 0
Q ss_pred hhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHH
Q 039533 865 VMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHELQ 929 (949)
Q Consensus 865 ~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~ 929 (949)
.......... ++.....+..+.+++.+|++.+|++|||+.+|.+.|+
T Consensus 210 ~~~~~~~~~~------------------~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l~ 256 (265)
T cd05579 210 FQNILNGKIE------------------WPEDVEVSDEAIDLISKLLVPDPEKRLGAKSIEEIKN 256 (265)
T ss_pred HHHHhcCCcC------------------CCccccCCHHHHHHHHHHhcCCHhhcCCCccHHHHhc
Confidence 0000000000 0000012456789999999999999999966665553
No 367
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.98 E-value=9.8e-33 Score=274.23 Aligned_cols=272 Identities=21% Similarity=0.287 Sum_probs=201.5
Q ss_pred CHHHHHHHhcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCCcchHHHHHHHHHHHhc-CCCcceeEEeeeecc
Q 039533 617 SYQDLYNATSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHGASRSFIAECKALKSI-RHRNLVKVLTACLGA 695 (949)
Q Consensus 617 ~~~~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~ 695 (949)
.++|+..-| .+.||+|+|+.|-.+....++..+|||++.+.......+..+|++++.+. .|+||++++++|.+.
T Consensus 74 ~F~d~YkLt-----~e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd 148 (463)
T KOG0607|consen 74 KFEDMYKLT-----SELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIEFFEDD 148 (463)
T ss_pred hHHHHHHhH-----HHHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHHHhccc
Confidence 466776666 36899999999999999989999999999887666678899999999999 599999999996544
Q ss_pred cccCCccceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeec
Q 039533 696 DYRGNDFKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLD 775 (949)
Q Consensus 696 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~ 775 (949)
...|+|||-|.||+|..+++ ....+++.++.++..+|+.||.|||++ ||.|||+||+|||-.
T Consensus 149 -----~~FYLVfEKm~GGplLshI~----------~~~~F~E~EAs~vvkdia~aLdFlH~k---gIAHRDlKPENiLC~ 210 (463)
T KOG0607|consen 149 -----TRFYLVFEKMRGGPLLSHIQ----------KRKHFNEREASRVVKDIASALDFLHTK---GIAHRDLKPENILCE 210 (463)
T ss_pred -----ceEEEEEecccCchHHHHHH----------HhhhccHHHHHHHHHHHHHHHHHHhhc---CcccccCCccceeec
Confidence 48999999999999999997 456789999999999999999999977 999999999999987
Q ss_pred CCC---ceEEeecccceecCCCC-----CccccccccCccCccCccccC---C--CccCCccchHHHHHHHHHHHhCCCC
Q 039533 776 DYM---TARVGDFGLARILSPDH-----TQTSSFSVKGSLGYIAPEYGV---G--CEVSTNGDVYSYGILLLELVIGKKP 842 (949)
Q Consensus 776 ~~~---~~kl~DfG~a~~~~~~~-----~~~~~~~~~gt~~y~aPE~~~---~--~~~~~~sDiwSlGvvl~elltg~~P 842 (949)
... -+||+||.++.-..... ....-...+|+..|||||+.. + ..|+.++|.||+|||+|-|++|.+|
T Consensus 211 ~pn~vsPvKiCDfDLgSg~k~~~~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpP 290 (463)
T KOG0607|consen 211 SPNKVSPVKICDFDLGSGIKLNNDCSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPP 290 (463)
T ss_pred CCCCcCceeeeccccccccccCCCCCCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCC
Confidence 554 47999998775432111 111222456999999999743 2 3588999999999999999999999
Q ss_pred CccccccCchhhhhccccCCCc-hhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCH
Q 039533 843 IDIMFEGDINLHNFGRKALPDD-VMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNM 921 (949)
Q Consensus 843 f~~~~~~~~~~~~~~~~~~~~~-~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~ 921 (949)
|...-..+- -|-+...-+. -..++ +.|..+.-.-+...|. .+..+..+++...+..|+.+|-++
T Consensus 291 FvG~Cg~dC---GWdrGe~Cr~CQ~~LF---------esIQEGkYeFPdkdWa---hIS~eakdlisnLlvrda~~rlsa 355 (463)
T KOG0607|consen 291 FVGHCGADC---GWDRGEVCRVCQNKLF---------ESIQEGKYEFPDKDWA---HISSEAKDLISNLLVRDAKQRLSA 355 (463)
T ss_pred ccCccCCcC---CccCCCccHHHHHHHH---------HHHhccCCcCChhhhH---HhhHHHHHHHHHHHhccHHhhhhh
Confidence 965432211 0111111000 00111 1111111112223333 444556777778888999999999
Q ss_pred HHHHH
Q 039533 922 TNVVH 926 (949)
Q Consensus 922 ~ev~~ 926 (949)
.+++.
T Consensus 356 ~~vln 360 (463)
T KOG0607|consen 356 AQVLN 360 (463)
T ss_pred hhccC
Confidence 98876
No 368
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=99.98 E-value=5.4e-32 Score=296.84 Aligned_cols=248 Identities=25% Similarity=0.328 Sum_probs=192.6
Q ss_pred CCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCC---CcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCccc
Q 039533 627 GFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQH---HGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFK 703 (949)
Q Consensus 627 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 703 (949)
.|+..+.||+|+||.||+|++..+++.||+|.+.... ....+++.+|++++++++|+|++++++++.... ..
T Consensus 16 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-----~~ 90 (308)
T cd06634 16 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREH-----TA 90 (308)
T ss_pred HHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCC-----ee
Confidence 4677789999999999999998889999999986432 223356788999999999999999999976544 78
Q ss_pred eeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEe
Q 039533 704 ASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVG 783 (949)
Q Consensus 704 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~ 783 (949)
++||||+. |++.+++.. ....+++.++..++.|++.|+.|||+. +++||||||+||+++.++.++|+
T Consensus 91 ~lv~e~~~-~~l~~~~~~---------~~~~l~~~~~~~~~~~l~~~l~~LH~~---~i~H~dl~p~nil~~~~~~~kl~ 157 (308)
T cd06634 91 WLVMEYCL-GSASDLLEV---------HKKPLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLG 157 (308)
T ss_pred EEEEEccC-CCHHHHHHH---------cCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHhEEECCCCcEEEC
Confidence 99999996 588777641 224478899999999999999999977 89999999999999999999999
Q ss_pred ecccceecCCCCCccccccccCccCccCccccC---CCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhcccc
Q 039533 784 DFGLARILSPDHTQTSSFSVKGSLGYIAPEYGV---GCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKA 860 (949)
Q Consensus 784 DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~ 860 (949)
|||.+....... ...++..|+|||++. ...++.++|||||||++|||++|+.||....... ...
T Consensus 158 dfg~~~~~~~~~------~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~-~~~------ 224 (308)
T cd06634 158 DFGSASIMAPAN------XFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS-ALY------ 224 (308)
T ss_pred CcccceeecCcc------cccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHHH-HHH------
Confidence 999988654322 234788999999874 3467889999999999999999999985321110 000
Q ss_pred CCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHH
Q 039533 861 LPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHELQ 929 (949)
Q Consensus 861 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~ 929 (949)
....... +.. .....+..+.+++.+||+.+|++||++.+|++.-.
T Consensus 225 ------~~~~~~~-~~~-----------------~~~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~~~ 269 (308)
T cd06634 225 ------HIAQNES-PAL-----------------QSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRF 269 (308)
T ss_pred ------HHhhcCC-CCc-----------------CcccccHHHHHHHHHHhhCCcccCCCHHHHhhCcc
Confidence 0000000 000 00133456789999999999999999999987543
No 369
>PHA03210 serine/threonine kinase US3; Provisional
Probab=99.98 E-value=1.7e-32 Score=318.68 Aligned_cols=205 Identities=19% Similarity=0.215 Sum_probs=157.2
Q ss_pred HhcCCCCCCeeeeecCceEEEEEEcCCC-EEEEEEEEe-----------------cCCCcchHHHHHHHHHHHhcCCCcc
Q 039533 624 ATSGFSSANLVGVGSFGSVYKGIIDEGR-TTIAVKVFN-----------------LQHHGASRSFIAECKALKSIRHRNL 685 (949)
Q Consensus 624 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~-~~vavK~~~-----------------~~~~~~~~~~~~E~~~l~~l~h~ni 685 (949)
..++|++.+.||+|+||+||+|..+... ..+++|.+. .........+.+|+.++++++||||
T Consensus 146 ~~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~HpnI 225 (501)
T PHA03210 146 FLAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHENI 225 (501)
T ss_pred hhhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCCc
Confidence 3568999999999999999998764322 112222110 0111223568899999999999999
Q ss_pred eeEEeeeecccccCCccceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEec
Q 039533 686 VKVLTACLGADYRGNDFKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHC 765 (949)
Q Consensus 686 v~~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHr 765 (949)
+++++++...+ ..++|+|++. +++.+++..... .........++..|+.|++.||+|||++ +|+||
T Consensus 226 v~l~~~~~~~~-----~~~lv~e~~~-~~l~~~l~~~~~-----~~~~~~~~~~~~~i~~ql~~aL~yLH~~---gIiHr 291 (501)
T PHA03210 226 LKIEEILRSEA-----NTYMITQKYD-FDLYSFMYDEAF-----DWKDRPLLKQTRAIMKQLLCAVEYIHDK---KLIHR 291 (501)
T ss_pred CcEeEEEEECC-----eeEEEEeccc-cCHHHHHhhccc-----cccccccHHHHHHHHHHHHHHHHHHHhC---CeecC
Confidence 99999976544 7899999985 577777652111 0112234667788999999999999977 99999
Q ss_pred CCCCCCeeecCCCceEEeecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCC
Q 039533 766 DLKPSNVLLDDYMTARVGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPI 843 (949)
Q Consensus 766 Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf 843 (949)
||||+|||++.++.+||+|||+++.+....... .....||..|+|||++.+..++.++|||||||++|||++|..++
T Consensus 292 DLKP~NILl~~~~~vkL~DFGla~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p 368 (501)
T PHA03210 292 DIKLENIFLNCDGKIVLGDFGTAMPFEKEREAF-DYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCP 368 (501)
T ss_pred CCCHHHEEECCCCCEEEEeCCCceecCcccccc-cccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCC
Confidence 999999999999999999999998765433221 12356999999999999999999999999999999999987543
No 370
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=99.98 E-value=7.1e-32 Score=299.88 Aligned_cols=276 Identities=21% Similarity=0.236 Sum_probs=194.6
Q ss_pred hcCCCC-CCeeeeecCceEEEEEEcCCCEEEEEEEEecCCCcc--------------hHHHHHHHHHHHhcCCCcceeEE
Q 039533 625 TSGFSS-ANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHGA--------------SRSFIAECKALKSIRHRNLVKVL 689 (949)
Q Consensus 625 ~~~y~~-~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~--------------~~~~~~E~~~l~~l~h~niv~~~ 689 (949)
.++|.. .+.||+|+||.||+|.+..+++.||||+++...... ...+.+|++++++++|+||++++
T Consensus 7 ~~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~ 86 (335)
T PTZ00024 7 SERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLV 86 (335)
T ss_pred ccchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeee
Confidence 356654 577999999999999998889999999986432211 12577899999999999999999
Q ss_pred eeeecccccCCccceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCC
Q 039533 690 TACLGADYRGNDFKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKP 769 (949)
Q Consensus 690 ~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp 769 (949)
+++...+ ..++||||++ ++|.+++. ....+++..+..++.|++.||+|||+. +++||||+|
T Consensus 87 ~~~~~~~-----~~~lv~e~~~-~~l~~~l~----------~~~~~~~~~~~~~~~ql~~aL~~LH~~---~i~H~dl~~ 147 (335)
T PTZ00024 87 DVYVEGD-----FINLVMDIMA-SDLKKVVD----------RKIRLTESQVKCILLQILNGLNVLHKW---YFMHRDLSP 147 (335)
T ss_pred EEEecCC-----cEEEEEeccc-cCHHHHHH----------hcCCCCHHHHHHHHHHHHHHHHHHHhC---CeecccccH
Confidence 9976444 7899999997 68999886 234588999999999999999999977 999999999
Q ss_pred CCeeecCCCceEEeecccceecCCCCC------------ccccccccCccCccCccccCCC-ccCCccchHHHHHHHHHH
Q 039533 770 SNVLLDDYMTARVGDFGLARILSPDHT------------QTSSFSVKGSLGYIAPEYGVGC-EVSTNGDVYSYGILLLEL 836 (949)
Q Consensus 770 ~NIll~~~~~~kl~DfG~a~~~~~~~~------------~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDiwSlGvvl~el 836 (949)
+||+++.++.+||+|||.++....... ........++..|+|||++.+. .++.++||||+||++|||
T Consensus 148 ~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el 227 (335)
T PTZ00024 148 ANIFINSKGICKIADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAEL 227 (335)
T ss_pred HHeEECCCCCEEECCccceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHH
Confidence 999999999999999999987651110 0111123467889999998764 468999999999999999
Q ss_pred HhCCCCCccccccCch--hhhhccccCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCC
Q 039533 837 VIGKKPIDIMFEGDIN--LHNFGRKALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMEL 914 (949)
Q Consensus 837 ltg~~Pf~~~~~~~~~--~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~d 914 (949)
++|+.||......+.. ............+....+.... .+ .....+..........+..+.+++.+|++.+
T Consensus 228 ~tg~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~-~~------~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~ 300 (335)
T PTZ00024 228 LTGKPLFPGENEIDQLGRIFELLGTPNEDNWPQAKKLPLY-TE------FTPRKPKDLKTIFPNASDDAIDLLQSLLKLN 300 (335)
T ss_pred HhCCCCCCCCCHHHHHHHHHHHhCCCchhhCcchhhcccc-cc------cCcCCcccHHHhCcCCChHHHHHHHHHcCCC
Confidence 9999999643221100 0000000000000000000000 00 0000000000011123456889999999999
Q ss_pred CCCCCCHHHHHH
Q 039533 915 PQDRTNMTNVVH 926 (949)
Q Consensus 915 P~~RPs~~ev~~ 926 (949)
|++|||++|++.
T Consensus 301 P~~R~s~~~~l~ 312 (335)
T PTZ00024 301 PLERISAKEALK 312 (335)
T ss_pred chhccCHHHHhc
Confidence 999999999986
No 371
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.98 E-value=3.9e-33 Score=277.35 Aligned_cols=201 Identities=24% Similarity=0.293 Sum_probs=172.6
Q ss_pred HhcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCC---cchHHHHHHHHHHHhcCCCcceeEEeeeecccccCC
Q 039533 624 ATSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHH---GASRSFIAECKALKSIRHRNLVKVLTACLGADYRGN 700 (949)
Q Consensus 624 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 700 (949)
..++|...++||+|.||.|.+++.+.+++.+|+|++++.-. ........|-++++..+||.+..+-..| ...
T Consensus 166 Tm~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsF-----Qt~ 240 (516)
T KOG0690|consen 166 TMEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSF-----QTQ 240 (516)
T ss_pred ccchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhh-----ccC
Confidence 34678889999999999999999999999999999985532 2234566789999999999998876554 444
Q ss_pred ccceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCce
Q 039533 701 DFKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTA 780 (949)
Q Consensus 701 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~ 780 (949)
++.|+||||..||.|.-++. ..+.+++...+-+-..|+.||.|||++ +||.||+|.+|.|+|.+|++
T Consensus 241 drlCFVMeyanGGeLf~HLs----------rer~FsE~RtRFYGaEIvsAL~YLHs~---~ivYRDlKLENLlLDkDGHI 307 (516)
T KOG0690|consen 241 DRLCFVMEYANGGELFFHLS----------RERVFSEDRTRFYGAEIVSALGYLHSR---NIVYRDLKLENLLLDKDGHI 307 (516)
T ss_pred ceEEEEEEEccCceEeeehh----------hhhcccchhhhhhhHHHHHHhhhhhhC---CeeeeechhhhheeccCCce
Confidence 58999999999999999987 245688888899999999999999987 99999999999999999999
Q ss_pred EEeecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCc
Q 039533 781 RVGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPID 844 (949)
Q Consensus 781 kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~ 844 (949)
||+|||+++.--...... ..+.||+.|.|||++....|+.++|.|.+||++|||++|+.||.
T Consensus 308 KitDFGLCKE~I~~g~t~--kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFy 369 (516)
T KOG0690|consen 308 KITDFGLCKEEIKYGDTT--KTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFY 369 (516)
T ss_pred Eeeecccchhccccccee--ccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCccc
Confidence 999999998643322222 24679999999999999999999999999999999999999995
No 372
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=99.98 E-value=8.3e-35 Score=326.66 Aligned_cols=414 Identities=27% Similarity=0.335 Sum_probs=329.0
Q ss_pred cEEEEEcCCCCCCccccCCCCCCCCCceeeccCceeccccCCcccCcccCcEEeeccccccCcCCCCCCCCccceeecCC
Q 039533 66 RVTLLDLRSLKLAGSVSHFIGNLSFLKQLYLQVNSFTHEIPSEIGGLRRLKVLALNNNSICGEIPTNISRCSTLIPIHPQ 145 (949)
Q Consensus 66 ~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~ 145 (949)
+...|+++.|.+. .+|.+++++.+|++|.|..|.+. ..|..+..+++|++||+|.|++. .+|..+..++.+..+..+
T Consensus 69 ~L~~ln~s~n~i~-~vp~s~~~~~~l~~lnL~~n~l~-~lP~~~~~lknl~~LdlS~N~f~-~~Pl~i~~lt~~~~~~~s 145 (1081)
T KOG0618|consen 69 HLRQLNLSRNYIR-SVPSSCSNMRNLQYLNLKNNRLQ-SLPASISELKNLQYLDLSFNHFG-PIPLVIEVLTAEEELAAS 145 (1081)
T ss_pred HHhhcccchhhHh-hCchhhhhhhcchhheeccchhh-cCchhHHhhhcccccccchhccC-CCchhHHhhhHHHHHhhh
Confidence 5667888888777 67788999999999999999998 89999999999999999999997 999999999999999999
Q ss_pred CccccccccccccCCCCCcEEECCCCCCCCCCCCCcCCCCCccEEeccccccCCCCCCcccCCCccccccccCccccccc
Q 039533 146 NNQLVGKILSRFSSLSKTEILNLGSNHLTGSIPSSLGNLSSIHTISLAYNNLDGTIPNSFGWFENLVFLSLAANNLSVVE 225 (949)
Q Consensus 146 ~n~l~~~~~~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 225 (949)
+|......+... .+.++|..|.+.+.++..+.++.. .|||++|.+. --.+..+.+|+.|....|+++.+.
T Consensus 146 ~N~~~~~lg~~~-----ik~~~l~~n~l~~~~~~~i~~l~~--~ldLr~N~~~---~~dls~~~~l~~l~c~rn~ls~l~ 215 (1081)
T KOG0618|consen 146 NNEKIQRLGQTS-----IKKLDLRLNVLGGSFLIDIYNLTH--QLDLRYNEME---VLDLSNLANLEVLHCERNQLSELE 215 (1081)
T ss_pred cchhhhhhcccc-----chhhhhhhhhcccchhcchhhhhe--eeecccchhh---hhhhhhccchhhhhhhhcccceEE
Confidence 994332222222 788999999999999988888777 7999999987 234677889999999999988664
Q ss_pred ccccCCCCChhhhccccccccccCCCCCCCCCCcchhccccccCcccEEEccCCCCCccCCchhhcccccccEEEccCcc
Q 039533 226 NKLTGEVPSLEKLQRLQHFTITSNSLGSGGNDDLSFLCSLTNATRLTWMHINSNNFGGLLPGCISNLSKTIKTLFLNNNK 305 (949)
Q Consensus 226 ~~l~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~~~~L~~L~L~~N~l~~~~p~~~~~l~~~L~~L~L~~N~ 305 (949)
- .-++|+.|+.+.|.+..... .....+|+++++++|++++. |+|+... .+|+.|...+|+
T Consensus 216 ~----------~g~~l~~L~a~~n~l~~~~~--------~p~p~nl~~~dis~n~l~~l-p~wi~~~-~nle~l~~n~N~ 275 (1081)
T KOG0618|consen 216 I----------SGPSLTALYADHNPLTTLDV--------HPVPLNLQYLDISHNNLSNL-PEWIGAC-ANLEALNANHNR 275 (1081)
T ss_pred e----------cCcchheeeeccCcceeecc--------ccccccceeeecchhhhhcc-hHHHHhc-ccceEecccchh
Confidence 2 23567788888888763221 12234678888888888864 4888777 468888888888
Q ss_pred ccCCCCCCCCCCCcccEEEeecceecccCCCcccccCCCCEEecCCcccccccCccc-----------------------
Q 039533 306 IYGSIPAGIGNFVNLQRLDMWNNQLSGTIPPAIGELQNLKILGLNRNKLSGNIPPSI----------------------- 362 (949)
Q Consensus 306 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~----------------------- 362 (949)
++ .+|..+..+++|+.|++.+|.+. -+|+....++.|++|+|..|+|. ..|+.+
T Consensus 276 l~-~lp~ri~~~~~L~~l~~~~nel~-yip~~le~~~sL~tLdL~~N~L~-~lp~~~l~v~~~~l~~ln~s~n~l~~lp~ 352 (1081)
T KOG0618|consen 276 LV-ALPLRISRITSLVSLSAAYNELE-YIPPFLEGLKSLRTLDLQSNNLP-SLPDNFLAVLNASLNTLNVSSNKLSTLPS 352 (1081)
T ss_pred HH-hhHHHHhhhhhHHHHHhhhhhhh-hCCCcccccceeeeeeehhcccc-ccchHHHhhhhHHHHHHhhhhcccccccc
Confidence 85 67777888888888888888887 66777777888888888888877 344322
Q ss_pred ---ccccccceeecccccccccCCCCCCCCCCCcEEEeeCccccCCCCCcc-cCCcccceeeccCCCccCCCCccccccc
Q 039533 363 ---GNLKMLLNLFLNDNFLEVSIPSSLGQCESLIEINLSNNNLSGTIPPQF-FSLSSLSISLDWSRNKLTGSLPIEVGKL 438 (949)
Q Consensus 363 ---~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~-~~l~~l~~~L~ls~N~l~~~~p~~~~~l 438 (949)
..++.|+.|++.+|.++...-..+.+.++|+.|+|++|+|. .+|+.. .++..| +.|+||+|+++ .+|..+..+
T Consensus 353 ~~e~~~~~Lq~LylanN~Ltd~c~p~l~~~~hLKVLhLsyNrL~-~fpas~~~kle~L-eeL~LSGNkL~-~Lp~tva~~ 429 (1081)
T KOG0618|consen 353 YEENNHAALQELYLANNHLTDSCFPVLVNFKHLKVLHLSYNRLN-SFPASKLRKLEEL-EELNLSGNKLT-TLPDTVANL 429 (1081)
T ss_pred ccchhhHHHHHHHHhcCcccccchhhhccccceeeeeecccccc-cCCHHHHhchHHh-HHHhcccchhh-hhhHHHHhh
Confidence 13456888999999999888788999999999999999998 777755 456666 89999999999 889999999
Q ss_pred cccceeeeccccccccCCcccccccchhhcccCccccccccCCCcCCCCCCCEEECCCCcCCCcCcccccCCc-cceEeC
Q 039533 439 KILEFLYVYENRLEGEIPSTFGNCIRLEQLGMGGNLFQGPISSSLGSLRGLRVLDLSQNNLSGEIPKFLAGLS-LNNLNL 517 (949)
Q Consensus 439 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~-L~~l~l 517 (949)
+.|++|...+|+|. ..| ++..++.|+.+|+|.|+|+...-..-..-++|++|||++|.-.-..-+.+..++ +...++
T Consensus 430 ~~L~tL~ahsN~l~-~fP-e~~~l~qL~~lDlS~N~L~~~~l~~~~p~p~LkyLdlSGN~~l~~d~~~l~~l~~l~~~~i 507 (1081)
T KOG0618|consen 430 GRLHTLRAHSNQLL-SFP-ELAQLPQLKVLDLSCNNLSEVTLPEALPSPNLKYLDLSGNTRLVFDHKTLKVLKSLSQMDI 507 (1081)
T ss_pred hhhHHHhhcCCcee-ech-hhhhcCcceEEecccchhhhhhhhhhCCCcccceeeccCCcccccchhhhHHhhhhhheec
Confidence 99999999999999 788 899999999999999999854332222228999999999984323333344333 555555
Q ss_pred CCC
Q 039533 518 SYN 520 (949)
Q Consensus 518 s~N 520 (949)
.-|
T Consensus 508 ~~~ 510 (1081)
T KOG0618|consen 508 TLN 510 (1081)
T ss_pred ccC
Confidence 555
No 373
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=99.98 E-value=2.7e-32 Score=295.28 Aligned_cols=250 Identities=23% Similarity=0.321 Sum_probs=198.5
Q ss_pred cCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCC---CcchHHHHHHHHHHHhcC-CCcceeEEeeeecccccCCc
Q 039533 626 SGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQH---HGASRSFIAECKALKSIR-HRNLVKVLTACLGADYRGND 701 (949)
Q Consensus 626 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~~ 701 (949)
++|.+.+.||+|++|.||+|+...+++.||+|++.... ....+.+.+|++++++++ ||||+++++++... +
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~-----~ 75 (280)
T cd05581 1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDE-----E 75 (280)
T ss_pred CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCC-----c
Confidence 47889999999999999999998889999999986432 233467889999999998 99999999886543 3
Q ss_pred cceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceE
Q 039533 702 FKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTAR 781 (949)
Q Consensus 702 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~k 781 (949)
..++||||+++++|.+++. ....+++..+..++.|++.||+|||+. +++|+||+|+||+++.++.++
T Consensus 76 ~~~lv~e~~~~~~L~~~l~----------~~~~l~~~~~~~i~~ql~~~l~~Lh~~---~~~H~dl~~~ni~i~~~~~~~ 142 (280)
T cd05581 76 NLYFVLEYAPNGELLQYIR----------KYGSLDEKCTRFYAAEILLALEYLHSK---GIIHRDLKPENILLDKDMHIK 142 (280)
T ss_pred eEEEEEcCCCCCcHHHHHH----------HcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEE
Confidence 7899999999999999996 233689999999999999999999977 899999999999999999999
Q ss_pred EeecccceecCCCCCc------------------cccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCC
Q 039533 782 VGDFGLARILSPDHTQ------------------TSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPI 843 (949)
Q Consensus 782 l~DfG~a~~~~~~~~~------------------~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf 843 (949)
++|||.+......... .......++..|+|||+..+..++.++||||||+++|++++|+.||
T Consensus 143 l~df~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~ 222 (280)
T cd05581 143 ITDFGTAKVLDPNSSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPF 222 (280)
T ss_pred ecCCccccccCCccccccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCC
Confidence 9999999876543321 1112345789999999988888999999999999999999999998
Q ss_pred ccccccCchhhhhccccCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCH--
Q 039533 844 DIMFEGDINLHNFGRKALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNM-- 921 (949)
Q Consensus 844 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~-- 921 (949)
....... .+ ....+... . .....++.+.+++.+|++.+|++||++
T Consensus 223 ~~~~~~~-~~------------~~~~~~~~-~-------------------~~~~~~~~~~~li~~~l~~~p~~R~~~~~ 269 (280)
T cd05581 223 RGSNEYL-TF------------QKILKLEY-S-------------------FPPNFPPDAKDLIEKLLVLDPQDRLGVNE 269 (280)
T ss_pred CCccHHH-HH------------HHHHhcCC-C-------------------CCCccCHHHHHHHHHHhcCCHhhCCCccc
Confidence 6432100 00 00000000 0 001224568899999999999999999
Q ss_pred --HHHHH
Q 039533 922 --TNVVH 926 (949)
Q Consensus 922 --~ev~~ 926 (949)
+|+++
T Consensus 270 ~~~~ll~ 276 (280)
T cd05581 270 GYDELKA 276 (280)
T ss_pred CHHHHhc
Confidence 66653
No 374
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=99.98 E-value=1.7e-31 Score=293.55 Aligned_cols=245 Identities=26% Similarity=0.324 Sum_probs=189.9
Q ss_pred CCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCC---cchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCccce
Q 039533 628 FSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHH---GASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFKA 704 (949)
Q Consensus 628 y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 704 (949)
|...+.||+|+||.||+|++..+++.||+|++..... ...+.+.+|++++++++|||++++++++.+.. ..+
T Consensus 23 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-----~~~ 97 (313)
T cd06633 23 FVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEH-----TAW 97 (313)
T ss_pred hhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCC-----EEE
Confidence 5667889999999999999988899999999874432 22356788999999999999999999976544 789
Q ss_pred eEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEee
Q 039533 705 SVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVGD 784 (949)
Q Consensus 705 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~D 784 (949)
+||||+. |++.+++.. ....+++.++..++.|++.|++|||+. +++||||+|+||+++.++.+||+|
T Consensus 98 lv~e~~~-~~l~~~l~~---------~~~~l~~~~~~~~~~qi~~al~~LH~~---gi~H~dl~p~nili~~~~~~kL~d 164 (313)
T cd06633 98 LVMEYCL-GSASDLLEV---------HKKPLQEVEIAAITHGALQGLAYLHSH---NMIHRDIKAGNILLTEPGQVKLAD 164 (313)
T ss_pred EEEecCC-CCHHHHHHh---------cCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCChhhEEECCCCCEEEee
Confidence 9999996 577777752 234588999999999999999999977 899999999999999999999999
Q ss_pred cccceecCCCCCccccccccCccCccCccccC---CCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhccccC
Q 039533 785 FGLARILSPDHTQTSSFSVKGSLGYIAPEYGV---GCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKAL 861 (949)
Q Consensus 785 fG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~ 861 (949)
||.+....... ...|+..|+|||++. ...++.++|||||||++|||++|..||........ ..
T Consensus 165 fg~~~~~~~~~------~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~~-~~------- 230 (313)
T cd06633 165 FGSASKSSPAN------SFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSA-LY------- 230 (313)
T ss_pred cCCCcccCCCC------CccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHH-HH-------
Confidence 99986432211 245889999999974 45688999999999999999999999853311100 00
Q ss_pred CCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHH
Q 039533 862 PDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHE 927 (949)
Q Consensus 862 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 927 (949)
........... ....+..+.+++.+|++.+|++||++.|+++.
T Consensus 231 -----~~~~~~~~~~~------------------~~~~~~~l~~li~~~l~~~P~~Rp~~~~~l~~ 273 (313)
T cd06633 231 -----HIAQNDSPTLQ------------------SNEWTDSFRGFVDYCLQKIPQERPASAELLRH 273 (313)
T ss_pred -----HHHhcCCCCCC------------------ccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 00000000000 00123457889999999999999999999863
No 375
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=99.97 E-value=7.5e-32 Score=288.42 Aligned_cols=251 Identities=20% Similarity=0.243 Sum_probs=193.2
Q ss_pred CCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCC-----CcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCc
Q 039533 627 GFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQH-----HGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGND 701 (949)
Q Consensus 627 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 701 (949)
+|.+.+.||+|+||.||+|.+...+..+++|+.+... .....++..|+.++++++||||+++++++.+.+
T Consensus 1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~----- 75 (260)
T cd08222 1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERD----- 75 (260)
T ss_pred CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCC-----
Confidence 5888999999999999999998666667777765321 122345778999999999999999998865443
Q ss_pred cceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceE
Q 039533 702 FKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTAR 781 (949)
Q Consensus 702 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~k 781 (949)
..++||||+++++|.+++.... .....+++.+++.++.|++.|+.|||+. +++|+||||+||++++ +.++
T Consensus 76 ~~~lv~e~~~~~~l~~~~~~~~------~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~h~~l~~~nili~~-~~~~ 145 (260)
T cd08222 76 AFCIITEYCEGRDLDCKLEELK------HTGKTLSENQVCEWFIQLLLGVHYMHQR---RILHRDLKAKNIFLKN-NLLK 145 (260)
T ss_pred ceEEEEEeCCCCCHHHHHHHHh------hcccccCHHHHHHHHHHHHHHHHHHHHc---CccccCCChhheEeec-CCEe
Confidence 7899999999999999886321 1235689999999999999999999977 9999999999999986 5799
Q ss_pred EeecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhccccC
Q 039533 782 VGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKAL 861 (949)
Q Consensus 782 l~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~ 861 (949)
|+|||.++......... ....|+..|+|||...+..++.++|+||||+++|+|++|..||...... ...
T Consensus 146 l~d~g~~~~~~~~~~~~--~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~~~-----~~~---- 214 (260)
T cd08222 146 IGDFGVSRLLMGSCDLA--TTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQNFL-----SVV---- 214 (260)
T ss_pred ecccCceeecCCCcccc--cCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCccHH-----HHH----
Confidence 99999998764433221 1345888999999988888899999999999999999999998532110 000
Q ss_pred CCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 039533 862 PDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVH 926 (949)
Q Consensus 862 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 926 (949)
.......... .....+..+.+++.+|+..+|++||++.|+++
T Consensus 215 ----~~~~~~~~~~-------------------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 256 (260)
T cd08222 215 ----LRIVEGPTPS-------------------LPETYSRQLNSIMQSMLNKDPSLRPSAAEILR 256 (260)
T ss_pred ----HHHHcCCCCC-------------------CcchhcHHHHHHHHHHhcCChhhCcCHHHHhh
Confidence 0000000000 01134557889999999999999999999975
No 376
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=99.97 E-value=6.5e-32 Score=293.54 Aligned_cols=257 Identities=21% Similarity=0.235 Sum_probs=195.3
Q ss_pred CCCCCCeeeeecCceEEEEEEc---CCCEEEEEEEEecCC----CcchHHHHHHHHHHHhc-CCCcceeEEeeeeccccc
Q 039533 627 GFSSANLVGVGSFGSVYKGIID---EGRTTIAVKVFNLQH----HGASRSFIAECKALKSI-RHRNLVKVLTACLGADYR 698 (949)
Q Consensus 627 ~y~~~~~lg~G~~g~Vy~~~~~---~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~ 698 (949)
+|++.+.||+|++|.||+|+.. .+++.||||+++... ....+.+.+|+++++++ +||||+++++.+...
T Consensus 1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~--- 77 (288)
T cd05583 1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTD--- 77 (288)
T ss_pred CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecC---
Confidence 4788899999999999999864 356889999987432 22335688999999999 599999999886443
Q ss_pred CCccceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCC
Q 039533 699 GNDFKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYM 778 (949)
Q Consensus 699 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~ 778 (949)
...++||||+++++|.+++.. ...+++..+..++.|+++||+|||+. +++||||||+||+++.++
T Consensus 78 --~~~~lv~e~~~~~~L~~~~~~----------~~~~~~~~~~~~~~ql~~~l~~lH~~---~~~H~dl~p~nil~~~~~ 142 (288)
T cd05583 78 --TKLHLILDYVNGGELFTHLYQ----------REHFTESEVRVYIAEIVLALDHLHQL---GIIYRDIKLENILLDSEG 142 (288)
T ss_pred --CEEEEEEecCCCCcHHHHHhh----------cCCcCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCC
Confidence 378999999999999999862 24578889999999999999999976 899999999999999999
Q ss_pred ceEEeecccceecCCCCCccccccccCccCccCccccCCCc--cCCccchHHHHHHHHHHHhCCCCCccccccCchhhhh
Q 039533 779 TARVGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCE--VSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNF 856 (949)
Q Consensus 779 ~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~ 856 (949)
.++|+|||+++......... .....|+..|+|||...+.. .+.++||||||+++|||++|..||....... .....
T Consensus 143 ~~~l~dfg~~~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~-~~~~~ 220 (288)
T cd05583 143 HVVLTDFGLSKEFLAEEEER-AYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQN-SQSEI 220 (288)
T ss_pred CEEEEECccccccccccccc-cccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcccc-hHHHH
Confidence 99999999987654432211 11345889999999987654 7889999999999999999999985221100 00000
Q ss_pred ccccCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHHh
Q 039533 857 GRKALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHELQSI 931 (949)
Q Consensus 857 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i 931 (949)
. ....... .+. .......+.+++.+|++.+|++|||+.+|.+.|+..
T Consensus 221 ~--------~~~~~~~-~~~-------------------~~~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~~ 267 (288)
T cd05583 221 S--------RRILKSK-PPF-------------------PKTMSAEARDFIQKLLEKDPKKRLGANGADEIKNHP 267 (288)
T ss_pred H--------HHHHccC-CCC-------------------CcccCHHHHHHHHHHhcCCHhhccCcchHHHHhcCc
Confidence 0 0000000 000 012334678899999999999999999888877654
No 377
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=99.97 E-value=1.2e-31 Score=290.61 Aligned_cols=273 Identities=22% Similarity=0.272 Sum_probs=197.6
Q ss_pred CCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCC--CcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCcccee
Q 039533 628 FSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQH--HGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFKAS 705 (949)
Q Consensus 628 y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 705 (949)
|+..+.||+|++|.||+|+...+++.||+|++.... ....+.+..|+.++++++|+|++++++++.+. ...++
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-----~~~~~ 75 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTE-----RKLYL 75 (282)
T ss_pred CeeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcC-----CceEE
Confidence 567789999999999999999889999999998653 33346788999999999999999999987654 37899
Q ss_pred EeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEeec
Q 039533 706 VYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVGDF 785 (949)
Q Consensus 706 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~Df 785 (949)
||||++ ++|.+++.. ....+++..+..++.|++.||+|||++ +|+||||+|+||++++++.+||+||
T Consensus 76 v~e~~~-~~l~~~i~~---------~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~~l~~~ni~~~~~~~~~l~d~ 142 (282)
T cd07829 76 VFEYCD-MDLKKYLDK---------RPGPLSPNLIKSIMYQLLRGLAYCHSH---RILHRDLKPQNILINRDGVLKLADF 142 (282)
T ss_pred EecCcC-cCHHHHHHh---------hccCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChheEEEcCCCCEEEecC
Confidence 999997 599999972 114589999999999999999999987 8999999999999999999999999
Q ss_pred ccceecCCCCCccccccccCccCccCccccCCC-ccCCccchHHHHHHHHHHHhCCCCCccccccCc--hhhhhccccCC
Q 039533 786 GLARILSPDHTQTSSFSVKGSLGYIAPEYGVGC-EVSTNGDVYSYGILLLELVIGKKPIDIMFEGDI--NLHNFGRKALP 862 (949)
Q Consensus 786 G~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~--~~~~~~~~~~~ 862 (949)
|.++......... ....++..|+|||.+.+. .++.++|||||||++||+++|+.||........ ..........+
T Consensus 143 g~~~~~~~~~~~~--~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (282)
T cd07829 143 GLARAFGIPLRTY--THEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPTE 220 (282)
T ss_pred CcccccCCCcccc--CccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCcH
Confidence 9998765433211 123367789999998776 789999999999999999999999864321100 00000000000
Q ss_pred CchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 039533 863 DDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVH 926 (949)
Q Consensus 863 ~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 926 (949)
.......+.. ................. .......+.+++.+|+..+|++||++.||+.
T Consensus 221 ~~~~~~~~~~---~~~~~~~~~~~~~~~~~---~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~ 278 (282)
T cd07829 221 ESWPGVTKLP---DYKPTFPKFPPKDLEKV---LPRLDPEGIDLLSKMLQYNPAKRISAKEALK 278 (282)
T ss_pred HHHHhhcccc---cccccccccCccchHHh---cccccHHHHHHHHHhhccCcccCCCHHHHhh
Confidence 0000000000 00000000000000000 1122567899999999999999999999875
No 378
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=99.97 E-value=1.8e-31 Score=290.47 Aligned_cols=252 Identities=22% Similarity=0.255 Sum_probs=190.4
Q ss_pred CCCCCCeeeeecCceEEEEEEc---CCCEEEEEEEEecCCC----cchHHHHHHHHHHHhc-CCCcceeEEeeeeccccc
Q 039533 627 GFSSANLVGVGSFGSVYKGIID---EGRTTIAVKVFNLQHH----GASRSFIAECKALKSI-RHRNLVKVLTACLGADYR 698 (949)
Q Consensus 627 ~y~~~~~lg~G~~g~Vy~~~~~---~~~~~vavK~~~~~~~----~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~ 698 (949)
+|++.+.||+|+||.||+|+.. .+++.||+|+++.... ...+.+.+|+++++++ +|++|+++++++...
T Consensus 1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~--- 77 (290)
T cd05613 1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTD--- 77 (290)
T ss_pred CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecC---
Confidence 4788899999999999999874 3678999999874321 2235678899999999 599999999886543
Q ss_pred CCccceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCC
Q 039533 699 GNDFKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYM 778 (949)
Q Consensus 699 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~ 778 (949)
...++||||+++++|.+++.. ...+++..+..++.|+++||+|||+. +++||||+|+||++++++
T Consensus 78 --~~~~lv~e~~~~~~L~~~l~~----------~~~l~~~~~~~~~~qi~~al~~lH~~---~i~H~dl~p~nil~~~~~ 142 (290)
T cd05613 78 --TKLHLILDYINGGELFTHLSQ----------RERFKEQEVQIYSGEIVLALEHLHKL---GIIYRDIKLENILLDSNG 142 (290)
T ss_pred --CeEEEEEecCCCCcHHHHHHH----------cCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeEECCCC
Confidence 378999999999999999862 24578889999999999999999976 999999999999999999
Q ss_pred ceEEeecccceecCCCCCccccccccCccCccCccccCCC--ccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhh
Q 039533 779 TARVGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGC--EVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNF 856 (949)
Q Consensus 779 ~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~ 856 (949)
.+||+|||++.......... .....|+..|+|||...+. .++.++||||||+++|+|++|+.||...... ......
T Consensus 143 ~~kl~dfg~~~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~-~~~~~~ 220 (290)
T cd05613 143 HVVLTDFGLSKEFHEDEVER-AYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEK-NSQAEI 220 (290)
T ss_pred CEEEeeCccceecccccccc-cccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCcc-ccHHHH
Confidence 99999999998754432211 1234588999999998753 4678999999999999999999998532110 000000
Q ss_pred ccccCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCC-----CHHHHHH
Q 039533 857 GRKALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRT-----NMTNVVH 926 (949)
Q Consensus 857 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----s~~ev~~ 926 (949)
.+.+.....+.+ ......+.+++.+|++.||++|| ++.+++.
T Consensus 221 ---------~~~~~~~~~~~~-------------------~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~ 267 (290)
T cd05613 221 ---------SRRILKSEPPYP-------------------QEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKK 267 (290)
T ss_pred ---------HHHhhccCCCCC-------------------ccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHc
Confidence 000000000000 12345678999999999999997 6666654
No 379
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=5.4e-33 Score=286.41 Aligned_cols=259 Identities=23% Similarity=0.334 Sum_probs=197.0
Q ss_pred cCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecC--CC-----cchHHHHHHHHHHHhcCCCcceeEEeeeeccccc
Q 039533 626 SGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQ--HH-----GASRSFIAECKALKSIRHRNLVKVLTACLGADYR 698 (949)
Q Consensus 626 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~--~~-----~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 698 (949)
++|-..+.||+|||+.||+|.+-...+.||||+-... .. ...+...+|.++-+.++||.||++|+|+.-.
T Consensus 463 ~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslD--- 539 (775)
T KOG1151|consen 463 DRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLD--- 539 (775)
T ss_pred HHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeec---
Confidence 4577778999999999999999888999999997522 11 1235577899999999999999999998533
Q ss_pred CCccceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeec---
Q 039533 699 GNDFKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLD--- 775 (949)
Q Consensus 699 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~--- 775 (949)
.+.+|-|+||++|.+|+-|++ ..+.+++.+++.|+.||+.||.||... +++|||-||||.|||+.
T Consensus 540 -tdsFCTVLEYceGNDLDFYLK----------QhklmSEKEARSIiMQiVnAL~YLNEi-kpPIIHYDLKPgNILLv~Gt 607 (775)
T KOG1151|consen 540 -TDSFCTVLEYCEGNDLDFYLK----------QHKLMSEKEARSIIMQIVNALKYLNEI-KPPIIHYDLKPGNILLVNGT 607 (775)
T ss_pred -cccceeeeeecCCCchhHHHH----------hhhhhhHHHHHHHHHHHHHHHHHHhcc-CCCeeeeccCCccEEEecCc
Confidence 347899999999999999997 456689999999999999999999988 89999999999999994
Q ss_pred CCCceEEeecccceecCCCCCc-----cccccccCccCccCccccCCC----ccCCccchHHHHHHHHHHHhCCCCCccc
Q 039533 776 DYMTARVGDFGLARILSPDHTQ-----TSSFSVKGSLGYIAPEYGVGC----EVSTNGDVYSYGILLLELVIGKKPIDIM 846 (949)
Q Consensus 776 ~~~~~kl~DfG~a~~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~----~~~~~sDiwSlGvvl~elltg~~Pf~~~ 846 (949)
.-|.+||+|||+++.+..+... .......||++|.+||.+.-+ +.+.|+||||.|||+|..+.|+.||...
T Consensus 608 acGeIKITDFGLSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhn 687 (775)
T KOG1151|consen 608 ACGEIKITDFGLSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHN 687 (775)
T ss_pred ccceeEeeecchhhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCc
Confidence 5588999999999998765432 122245699999999986533 5789999999999999999999999644
Q ss_pred cccCchhhhhccccCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 039533 847 FEGDINLHNFGRKALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVH 926 (949)
Q Consensus 847 ~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 926 (949)
......+ .... +...-.-.+.+. .....+...++++|+++--++|....+++.
T Consensus 688 qsQQdIL-qeNT------IlkAtEVqFP~K--------------------PvVsseAkaFIRRCLaYRKeDR~DV~qLA~ 740 (775)
T KOG1151|consen 688 QSQQDIL-QENT------ILKATEVQFPPK--------------------PVVSSEAKAFIRRCLAYRKEDRIDVQQLAC 740 (775)
T ss_pred hhHHHHH-hhhc------hhcceeccCCCC--------------------CccCHHHHHHHHHHHHhhhhhhhhHHHHcc
Confidence 2221111 0000 000000001111 122344567888999988888887777653
No 380
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=99.97 E-value=2.6e-31 Score=312.98 Aligned_cols=267 Identities=25% Similarity=0.390 Sum_probs=207.6
Q ss_pred cCCCCCCeeeeecCceEEEEEEcC-------CCEEEEEEEEecCCC-cchHHHHHHHHHHHhc-CCCcceeEEeeeeccc
Q 039533 626 SGFSSANLVGVGSFGSVYKGIIDE-------GRTTIAVKVFNLQHH-GASRSFIAECKALKSI-RHRNLVKVLTACLGAD 696 (949)
Q Consensus 626 ~~y~~~~~lg~G~~g~Vy~~~~~~-------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~ 696 (949)
++..+.+.+|+|.||.||+|.... ....||||..+.... .+.+.+..|+++|+.+ +|+||+.++|+|...+
T Consensus 296 ~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG~~t~~~ 375 (609)
T KOG0200|consen 296 ENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLGACTQDG 375 (609)
T ss_pred hhccccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhheeeeccCC
Confidence 344566799999999999998641 146799999874433 3457899999999999 6999999999997633
Q ss_pred ccCCccceeEeeeccCCChhhhcCCCCCCCccccCC------CCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCC
Q 039533 697 YRGNDFKASVYEFMHYGSLEEWLHPFTGEDEIDEAP------RNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPS 770 (949)
Q Consensus 697 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~------~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~ 770 (949)
..++|+||++.|+|.+|++..+........+ ..++..+.+.++.|||.|++||++. ++|||||-.+
T Consensus 376 -----~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~---~~vHRDLAaR 447 (609)
T KOG0200|consen 376 -----PLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASV---PCVHRDLAAR 447 (609)
T ss_pred -----ceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhC---Cccchhhhhh
Confidence 7899999999999999998655111111111 3489999999999999999999977 8999999999
Q ss_pred CeeecCCCceEEeecccceecCCCCCccccccccC--ccCccCccccCCCccCCccchHHHHHHHHHHHh-CCCCCcccc
Q 039533 771 NVLLDDYMTARVGDFGLARILSPDHTQTSSFSVKG--SLGYIAPEYGVGCEVSTNGDVYSYGILLLELVI-GKKPIDIMF 847 (949)
Q Consensus 771 NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~g--t~~y~aPE~~~~~~~~~~sDiwSlGvvl~ellt-g~~Pf~~~~ 847 (949)
|||+.++..+||+|||+|+............ ..| ...|||||.+....++.|+|||||||++|||+| |..||....
T Consensus 448 NVLi~~~~~~kIaDFGlar~~~~~~~y~~~~-~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~ 526 (609)
T KOG0200|consen 448 NVLITKNKVIKIADFGLARDHYNKDYYRTKS-SAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPGIP 526 (609)
T ss_pred hEEecCCCEEEEccccceeccCCCCceEecC-CCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCCCCC
Confidence 9999999999999999999766554433221 112 345999999999999999999999999999999 899986421
Q ss_pred ccCchhhhhccccCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHH
Q 039533 848 EGDINLHNFGRKALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHE 927 (949)
Q Consensus 848 ~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 927 (949)
.. +++.+.+. .+.+.+.+..|..++.++++.||+.+|++||++.|+.+.
T Consensus 527 ~~-------------~~l~~~l~------------------~G~r~~~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~~ 575 (609)
T KOG0200|consen 527 PT-------------EELLEFLK------------------EGNRMEQPEHCSDEIYDLMKSCWNADPEDRPTFSECVEF 575 (609)
T ss_pred cH-------------HHHHHHHh------------------cCCCCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHH
Confidence 00 01111111 122223334667789999999999999999999999999
Q ss_pred HHHhH
Q 039533 928 LQSIK 932 (949)
Q Consensus 928 L~~i~ 932 (949)
++...
T Consensus 576 ~~~~l 580 (609)
T KOG0200|consen 576 FEKHL 580 (609)
T ss_pred HHHHH
Confidence 99954
No 381
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=99.97 E-value=9.5e-34 Score=275.01 Aligned_cols=253 Identities=25% Similarity=0.275 Sum_probs=191.5
Q ss_pred CeeeeecCceEEEEEEcCCCEEEEEEEEecCCC-cchHHHHHHHHHHHhc-CCCcceeEEeeeecccccCCccceeEeee
Q 039533 632 NLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHH-GASRSFIAECKALKSI-RHRNLVKVLTACLGADYRGNDFKASVYEF 709 (949)
Q Consensus 632 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~~lv~e~ 709 (949)
..||.|.||+|++-.++..|+..|||+++.... ...+++..|.+...+- +.||||++||++...+ ..|+-||.
T Consensus 70 g~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EG-----dcWiCMEL 144 (361)
T KOG1006|consen 70 GEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEG-----DCWICMEL 144 (361)
T ss_pred HHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCC-----ceeeeHHH
Confidence 579999999999999999999999999986554 5567888998876665 6899999999986544 68999999
Q ss_pred ccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEeecccce
Q 039533 710 MHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVGDFGLAR 789 (949)
Q Consensus 710 ~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~DfG~a~ 789 (949)
|. .|++.+.+.- .......+++.-.-+|....+.||.||.... .|+|||+||+|||++..|.+||||||++.
T Consensus 145 Md-~SlDklYk~v-----y~vq~~~ipE~Ilg~ItvatV~AL~yLK~~l--kiIHRDvKPSNILldr~G~vKLCDFGIcG 216 (361)
T KOG1006|consen 145 MD-ISLDKLYKRV-----YSVQKSRIPENILGHITVATVDALDYLKEEL--KIIHRDVKPSNILLDRHGDVKLCDFGICG 216 (361)
T ss_pred Hh-hhHHHHHHHH-----HHHHhccCcHhhhhheeeeehhHHHHHHHHh--hhhhccCChhheEEecCCCEeeecccchH
Confidence 95 4776655311 1123456788888889999999999999865 89999999999999999999999999997
Q ss_pred ecCCCCCccccccccCccCccCccccCCC--ccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhccccCCCchhh
Q 039533 790 ILSPDHTQTSSFSVKGSLGYIAPEYGVGC--EVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKALPDDVMD 867 (949)
Q Consensus 790 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~ 867 (949)
.+..+-..+ ...|-..|||||.+... .|+.+|||||+|+++||+.||+.||..+......+...+. .+..
T Consensus 217 qLv~SiAkT---~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~svfeql~~Vv~----gdpp- 288 (361)
T KOG1006|consen 217 QLVDSIAKT---VDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDSVFEQLCQVVI----GDPP- 288 (361)
T ss_pred hHHHHHHhh---hccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHHHHHHHHHHHc----CCCC-
Confidence 665443322 34588999999987643 4899999999999999999999999754221111111110 0000
Q ss_pred hcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 039533 868 IVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVH 926 (949)
Q Consensus 868 ~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 926 (949)
.+..+. ...+....+.+++..|+.+|-.+||...++.+
T Consensus 289 ----~l~~~~-----------------~~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~ 326 (361)
T KOG1006|consen 289 ----ILLFDK-----------------ECVHYSFSMVRFINTCLIKDRSDRPKYDDLKK 326 (361)
T ss_pred ----eecCcc-----------------cccccCHHHHHHHHHHhhcccccCcchhhhhc
Confidence 000000 01234567899999999999999999998765
No 382
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=99.97 E-value=3.1e-31 Score=317.57 Aligned_cols=147 Identities=27% Similarity=0.357 Sum_probs=129.6
Q ss_pred hcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCC---cchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCc
Q 039533 625 TSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHH---GASRSFIAECKALKSIRHRNLVKVLTACLGADYRGND 701 (949)
Q Consensus 625 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 701 (949)
.++|.+.++||+|+||.||+|++..+++.||||+++.... .....+..|+.+++.++||||+++++++...+
T Consensus 3 ~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~----- 77 (669)
T cd05610 3 IEEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSAN----- 77 (669)
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECC-----
Confidence 3679999999999999999999998899999999975432 22367889999999999999999998865444
Q ss_pred cceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceE
Q 039533 702 FKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTAR 781 (949)
Q Consensus 702 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~k 781 (949)
..++||||+++++|.+++.. ...+++..++.|+.||+.||+|||++ +|+||||||+|||++.++.+|
T Consensus 78 ~~~lVmEy~~g~~L~~li~~----------~~~l~~~~~~~i~~qil~aL~yLH~~---gIiHrDLKP~NILl~~~g~vk 144 (669)
T cd05610 78 NVYLVMEYLIGGDVKSLLHI----------YGYFDEEMAVKYISEVALALDYLHRH---GIIHRDLKPDNMLISNEGHIK 144 (669)
T ss_pred EEEEEEeCCCCCCHHHHHHh----------cCCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCccHHHEEEcCCCCEE
Confidence 78999999999999999862 23578889999999999999999977 999999999999999999999
Q ss_pred Eeecccce
Q 039533 782 VGDFGLAR 789 (949)
Q Consensus 782 l~DfG~a~ 789 (949)
|+|||+++
T Consensus 145 L~DFGls~ 152 (669)
T cd05610 145 LTDFGLSK 152 (669)
T ss_pred EEeCCCCc
Confidence 99999986
No 383
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=99.97 E-value=3.6e-32 Score=285.90 Aligned_cols=195 Identities=28% Similarity=0.416 Sum_probs=167.4
Q ss_pred CCeeeeecCceEEEEEEcCCCEEEEEEEEecCC--CcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCccceeEee
Q 039533 631 ANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQH--HGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFKASVYE 708 (949)
Q Consensus 631 ~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e 708 (949)
.++||.|.||+||-|+++.+|+.||||++.+.. .....++++|+++++++.||.||.+.-.|...+ ..++|||
T Consensus 569 devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~e-----rvFVVME 643 (888)
T KOG4236|consen 569 DEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPE-----RVFVVME 643 (888)
T ss_pred HhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCc-----eEEEEeh
Confidence 479999999999999999999999999997432 234478999999999999999999987765444 8999999
Q ss_pred eccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeec---CCCceEEeec
Q 039533 709 FMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLD---DYMTARVGDF 785 (949)
Q Consensus 709 ~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~---~~~~~kl~Df 785 (949)
-+.| +..+.+-. ...+++++....-++.||+.||.|||.+ +|+|+||||+|||+. .-.++||+||
T Consensus 644 Kl~G-DMLEMILS--------sEkgRL~er~TkFlvtQIL~ALr~LH~k---nIvHCDLKPENVLLas~~~FPQvKlCDF 711 (888)
T KOG4236|consen 644 KLHG-DMLEMILS--------SEKGRLPERITKFLVTQILVALRYLHFK---NIVHCDLKPENVLLASASPFPQVKLCDF 711 (888)
T ss_pred hhcc-hHHHHHHH--------hhcccchHHHHHHHHHHHHHHHHHhhhc---ceeeccCCchheeeccCCCCCceeeccc
Confidence 9965 55554431 2346688888888999999999999977 999999999999995 3458999999
Q ss_pred ccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCcc
Q 039533 786 GLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDI 845 (949)
Q Consensus 786 G~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~ 845 (949)
|+|++++...... .++||+.|.|||++....|...-|+||.||++|--++|..||.+
T Consensus 712 GfARiIgEksFRr---sVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNE 768 (888)
T KOG4236|consen 712 GFARIIGEKSFRR---SVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNE 768 (888)
T ss_pred cceeecchhhhhh---hhcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCC
Confidence 9999987655433 57899999999999999999999999999999999999999964
No 384
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=2.4e-32 Score=312.51 Aligned_cols=207 Identities=26% Similarity=0.336 Sum_probs=179.6
Q ss_pred HHHHHHhcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecC---CCcchHHHHHHHHHHHhcCCCcceeEEeeeecc
Q 039533 619 QDLYNATSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQ---HHGASRSFIAECKALKSIRHRNLVKVLTACLGA 695 (949)
Q Consensus 619 ~~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~ 695 (949)
.++.-..++|.+.++||+|+||.|..++++.+++.+|+|++.+. ......-|..|-.+|.--+.+=|+.+.-+|.
T Consensus 68 ~~lrl~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQ-- 145 (1317)
T KOG0612|consen 68 KELRLKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQ-- 145 (1317)
T ss_pred HHHhCCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhc--
Confidence 45666778999999999999999999999999999999999753 3445567889999999888899999877654
Q ss_pred cccCCccceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeec
Q 039533 696 DYRGNDFKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLD 775 (949)
Q Consensus 696 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~ 775 (949)
++.+.|+|||||+||+|-.++..+ ..+++..++-++..|+-||..+|+- |+|||||||+|||+|
T Consensus 146 ---D~~~LYlVMdY~pGGDlltLlSk~----------~~~pE~~ArFY~aEiVlAldslH~m---gyVHRDiKPDNvLld 209 (1317)
T KOG0612|consen 146 ---DERYLYLVMDYMPGGDLLTLLSKF----------DRLPEDWARFYTAEIVLALDSLHSM---GYVHRDIKPDNVLLD 209 (1317)
T ss_pred ---CccceEEEEecccCchHHHHHhhc----------CCChHHHHHHHHHHHHHHHHHHHhc---cceeccCCcceeEec
Confidence 445899999999999999999732 2589999999999999999999955 999999999999999
Q ss_pred CCCceEEeecccceecCCCCCccccccccCccCccCccccC----C-CccCCccchHHHHHHHHHHHhCCCCCc
Q 039533 776 DYMTARVGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGV----G-CEVSTNGDVYSYGILLLELVIGKKPID 844 (949)
Q Consensus 776 ~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~----~-~~~~~~sDiwSlGvvl~elltg~~Pf~ 844 (949)
..|++||+|||.+-.+..+..... ...+|||.|.+||++. + +.|++.+|.||+||++|||+.|..||.
T Consensus 210 ~~GHikLADFGsClkm~~dG~V~s-~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFY 282 (1317)
T KOG0612|consen 210 KSGHIKLADFGSCLKMDADGTVRS-SVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFY 282 (1317)
T ss_pred ccCcEeeccchhHHhcCCCCcEEe-ccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcch
Confidence 999999999999988876655333 3567999999999866 2 568999999999999999999999995
No 385
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=99.97 E-value=2.1e-31 Score=243.38 Aligned_cols=199 Identities=25% Similarity=0.390 Sum_probs=169.3
Q ss_pred CCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCC--CcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCccce
Q 039533 627 GFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQH--HGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFKA 704 (949)
Q Consensus 627 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 704 (949)
.|...++||+|.||+||+|+...+++.||+|+++..+ ++......+|+-+++.++|.|||++++.... +....
T Consensus 3 ~ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhs-----dkklt 77 (292)
T KOG0662|consen 3 KYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHS-----DKKLT 77 (292)
T ss_pred chHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhcc-----CceeE
Confidence 4666789999999999999999999999999998543 4455788999999999999999999988543 34789
Q ss_pred eEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEee
Q 039533 705 SVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVGD 784 (949)
Q Consensus 705 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~D 784 (949)
+|+||++. +|..|... -.+.++.+.++.++.|+++||.++|++ .+.|||+||.|.+|+.+|+.|++|
T Consensus 78 lvfe~cdq-dlkkyfds---------lng~~d~~~~rsfmlqllrgl~fchsh---nvlhrdlkpqnllin~ngelklad 144 (292)
T KOG0662|consen 78 LVFEFCDQ-DLKKYFDS---------LNGDLDPEIVRSFMLQLLRGLGFCHSH---NVLHRDLKPQNLLINRNGELKLAD 144 (292)
T ss_pred EeHHHhhH-HHHHHHHh---------cCCcCCHHHHHHHHHHHHhhhhhhhhh---hhhhccCCcceEEeccCCcEEecc
Confidence 99999964 88888863 345689999999999999999999988 899999999999999999999999
Q ss_pred cccceecCCCCCccccccccCccCccCccccCCCc-cCCccchHHHHHHHHHHHh-CCCCCcc
Q 039533 785 FGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCE-VSTNGDVYSYGILLLELVI-GKKPIDI 845 (949)
Q Consensus 785 fG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~sDiwSlGvvl~ellt-g~~Pf~~ 845 (949)
||+|+.++-+..... ..+-|..|++|+++.+.+ |++..|+||-||++.|+.. |++.|..
T Consensus 145 fglarafgipvrcys--aevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg 205 (292)
T KOG0662|consen 145 FGLARAFGIPVRCYS--AEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPG 205 (292)
T ss_pred cchhhhcCCceEeee--ceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCC
Confidence 999998765543221 344789999999998876 8899999999999999997 6655643
No 386
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.97 E-value=7.3e-33 Score=266.46 Aligned_cols=210 Identities=23% Similarity=0.349 Sum_probs=172.4
Q ss_pred cCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecC--CCcchHHHHHHHHHHHhcCCCcceeEEeeeeccc---ccCC
Q 039533 626 SGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQ--HHGASRSFIAECKALKSIRHRNLVKVLTACLGAD---YRGN 700 (949)
Q Consensus 626 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~---~~~~ 700 (949)
+.|....+||+|.||.||+|+.+.+++.||+|++-.. ..+-.....+|+++++.++|+|++.+++.|.... .+..
T Consensus 17 ~~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~r 96 (376)
T KOG0669|consen 17 SKYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRDR 96 (376)
T ss_pred hHHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCccccc
Confidence 3456667999999999999999999999999876432 3344456789999999999999999998886533 2233
Q ss_pred ccceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCce
Q 039533 701 DFKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTA 780 (949)
Q Consensus 701 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~ 780 (949)
...|+||++++. +|...+.. ....++..++.+++.++..||.|+|.. .|+|||+||.|+||+.+|.+
T Consensus 97 ~t~ylVf~~ceh-DLaGlLsn---------~~vr~sls~Ikk~Mk~Lm~GL~~iHr~---kilHRDmKaaNvLIt~dgil 163 (376)
T KOG0669|consen 97 ATFYLVFDFCEH-DLAGLLSN---------RKVRFSLSEIKKVMKGLMNGLYYIHRN---KILHRDMKAANVLITKDGIL 163 (376)
T ss_pred ceeeeeHHHhhh-hHHHHhcC---------ccccccHHHHHHHHHHHHHHHHHHHHh---hHHhhcccHhhEEEcCCceE
Confidence 458999999986 88888852 235688999999999999999999977 89999999999999999999
Q ss_pred EEeecccceecCCCCC--ccccccccCccCccCccccCCC-ccCCccchHHHHHHHHHHHhCCCCCccccc
Q 039533 781 RVGDFGLARILSPDHT--QTSSFSVKGSLGYIAPEYGVGC-EVSTNGDVYSYGILLLELVIGKKPIDIMFE 848 (949)
Q Consensus 781 kl~DfG~a~~~~~~~~--~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDiwSlGvvl~elltg~~Pf~~~~~ 848 (949)
||+|||+|+.+..... ....+..+-|..|++||.+.|. .|+++.|||+-|||+.||+||.+-++...+
T Consensus 164 klADFGlar~fs~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnte 234 (376)
T KOG0669|consen 164 KLADFGLARAFSTSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTE 234 (376)
T ss_pred EeeccccccceecccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChH
Confidence 9999999987654332 2333455679999999988775 589999999999999999999998865433
No 387
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=99.97 E-value=4.3e-31 Score=295.78 Aligned_cols=267 Identities=21% Similarity=0.253 Sum_probs=217.0
Q ss_pred cCHHHHHHHhcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCCcchHHHHHHHHHHHhc-CCCcceeEEeeeec
Q 039533 616 LSYQDLYNATSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHGASRSFIAECKALKSI-RHRNLVKVLTACLG 694 (949)
Q Consensus 616 ~~~~~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~ 694 (949)
..++.+..-++.|.+.++||+|.+|.||+++...+++.+|+|+...... ..++...|..+++.. .|||++.++|++.-
T Consensus 9 ~~~~~lpdp~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d-~deEiE~eynil~~~~~hpnv~~fyg~~~k 87 (953)
T KOG0587|consen 9 IDLSSLPDPADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTED-EEEEIELEYNMLKKYSHHPNVATFYGAFIK 87 (953)
T ss_pred cchhhCCCCCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCcc-ccHHHHHHHHHHHhccCCCCcceEEEEEEE
Confidence 3444455567789999999999999999999999999999999875543 346788899999988 69999999999988
Q ss_pred ccccCCccceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeee
Q 039533 695 ADYRGNDFKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLL 774 (949)
Q Consensus 695 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll 774 (949)
.+...++..|+|||||.+||..|+++... +..+.|.....|++.++.|+.+||.. .++|||||-.|||+
T Consensus 88 ~~~~~~DqLWLVMEfC~gGSVTDLVKn~~--------g~rl~E~~IaYI~re~lrgl~HLH~n---kviHRDikG~NiLL 156 (953)
T KOG0587|consen 88 KDPGNGDQLWLVMEFCGGGSVTDLVKNTK--------GNRLKEEWIAYILREILRGLAHLHNN---KVIHRDIKGQNVLL 156 (953)
T ss_pred ecCCCCCeEEEEeeccCCccHHHHHhhhc--------ccchhhHHHHHHHHHHHHHHHHHhhc---ceeeecccCceEEE
Confidence 88778889999999999999999998543 45689999999999999999999977 89999999999999
Q ss_pred cCCCceEEeecccceecCCCCCccccccccCccCccCccccCCC-----ccCCccchHHHHHHHHHHHhCCCCCcccccc
Q 039533 775 DDYMTARVGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGC-----EVSTNGDVYSYGILLLELVIGKKPIDIMFEG 849 (949)
Q Consensus 775 ~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~ 849 (949)
+.++.+|++|||.+..+.... .......||+.|||||++... .|+.++|+||+|++..||--|.+|+.++...
T Consensus 157 T~e~~VKLvDFGvSaQldsT~--grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPm 234 (953)
T KOG0587|consen 157 TENAEVKLVDFGVSAQLDSTV--GRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPM 234 (953)
T ss_pred eccCcEEEeeeeeeeeeeccc--ccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcchh
Confidence 999999999999998765432 223356799999999997643 4778999999999999999999998644322
Q ss_pred CchhhhhccccCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 039533 850 DINLHNFGRKALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVH 926 (949)
Q Consensus 850 ~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 926 (949)
..- -...+.+......+....+++.+++..|+..|-++||++.++++
T Consensus 235 raL------------------------------F~IpRNPPPkLkrp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~ 281 (953)
T KOG0587|consen 235 RAL------------------------------FLIPRNPPPKLKRPKKWSKKFNDFISTCLVKDYEQRPSTEELLK 281 (953)
T ss_pred hhh------------------------------ccCCCCCCccccchhhHHHHHHHHHHHHHhhccccCcchhhhcc
Confidence 100 00111222233334456778899999999999999999998764
No 388
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=99.97 E-value=9.3e-31 Score=278.17 Aligned_cols=237 Identities=26% Similarity=0.263 Sum_probs=188.8
Q ss_pred eeeecCceEEEEEEcCCCEEEEEEEEecCCCc---chHHHHHHHHHHHhcCCCcceeEEeeeecccccCCccceeEeeec
Q 039533 634 VGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHG---ASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFKASVYEFM 710 (949)
Q Consensus 634 lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~ 710 (949)
||+|+||.||++....+++.+|+|+++..... ....+..|+.++++++||||+++++.+.. +...++||||+
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~~~~~~v~e~~ 75 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQT-----EEKLYLVLEYA 75 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeec-----CCeeEEEEecC
Confidence 68999999999999888999999998754322 34578899999999999999999988643 34789999999
Q ss_pred cCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEeeccccee
Q 039533 711 HYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVGDFGLARI 790 (949)
Q Consensus 711 ~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~DfG~a~~ 790 (949)
++++|.+++.. ...+++..+..++.|++.|+.|||+. +++|+||+|+||+++.++.++|+|||.+..
T Consensus 76 ~~~~L~~~l~~----------~~~l~~~~~~~~~~qi~~~l~~lh~~---~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~ 142 (250)
T cd05123 76 PGGELFSHLSK----------EGRFSEERARFYAAEIVLALEYLHSL---GIIYRDLKPENILLDADGHIKLTDFGLAKE 142 (250)
T ss_pred CCCcHHHHHHh----------cCCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcceEEEcCCCcEEEeecCccee
Confidence 99999999962 23588999999999999999999976 999999999999999999999999999987
Q ss_pred cCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhccccCCCchhhhcc
Q 039533 791 LSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKALPDDVMDIVD 870 (949)
Q Consensus 791 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~d 870 (949)
...... ......++..|+|||...+...+.++|+||||+++||+++|+.||...... ... ..+..
T Consensus 143 ~~~~~~--~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~--~~~-----------~~~~~ 207 (250)
T cd05123 143 LSSEGS--RTNTFCGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDRK--EIY-----------EKILK 207 (250)
T ss_pred cccCCC--cccCCcCCccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHH--HHH-----------HHHhc
Confidence 654321 112345888999999998888899999999999999999999999633210 000 00000
Q ss_pred cCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHH
Q 039533 871 SSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTN 923 (949)
Q Consensus 871 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~e 923 (949)
..... ....+..+.+++.+|+..||++||++++
T Consensus 208 ~~~~~--------------------~~~~~~~l~~~i~~~l~~~p~~R~~~~~ 240 (250)
T cd05123 208 DPLRF--------------------PEFLSPEARDLISGLLQKDPTKRLGSGG 240 (250)
T ss_pred CCCCC--------------------CCCCCHHHHHHHHHHhcCCHhhCCCccc
Confidence 00000 0012456788999999999999999955
No 389
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.97 E-value=2.3e-31 Score=290.77 Aligned_cols=241 Identities=22% Similarity=0.214 Sum_probs=190.7
Q ss_pred hcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCCcchHHHHHHHHHHHhc-CCCcceeEEeeeecccccCCccc
Q 039533 625 TSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHGASRSFIAECKALKSI-RHRNLVKVLTACLGADYRGNDFK 703 (949)
Q Consensus 625 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~ 703 (949)
++.|.....+|.|+|+.|-.+.+..+++..+||++.... .+..+|+.++... +||||+++.+.+.+ ..+.
T Consensus 321 ~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~----~~~~~e~~~~~~~~~h~niv~~~~v~~~-----~~~~ 391 (612)
T KOG0603|consen 321 TESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRA----DDNQDEIPISLLVRDHPNIVKSHDVYED-----GKEI 391 (612)
T ss_pred chhhccccccCCCCccceeeeeccccccchhheeccccc----cccccccchhhhhcCCCcceeecceecC-----Ccee
Confidence 456777888999999999999999999999999987552 2345677666666 79999999998654 4489
Q ss_pred eeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeee-cCCCceEE
Q 039533 704 ASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLL-DDYMTARV 782 (949)
Q Consensus 704 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll-~~~~~~kl 782 (949)
++|||.+.++-+.+.+.. .+... .++..|+.+|+.|+.|||++ ||||||+||+|||+ +..++++|
T Consensus 392 ~~v~e~l~g~ell~ri~~----------~~~~~-~e~~~w~~~lv~Av~~LH~~---gvvhRDLkp~NIL~~~~~g~lrl 457 (612)
T KOG0603|consen 392 YLVMELLDGGELLRRIRS----------KPEFC-SEASQWAAELVSAVDYLHEQ---GVVHRDLKPGNILLDGSAGHLRL 457 (612)
T ss_pred eeeehhccccHHHHHHHh----------cchhH-HHHHHHHHHHHHHHHHHHhc---CeeecCCChhheeecCCCCcEEE
Confidence 999999999988777751 22233 67788999999999999987 99999999999999 68999999
Q ss_pred eecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhccccCC
Q 039533 783 GDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKALP 862 (949)
Q Consensus 783 ~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~ 862 (949)
+|||.++....+- ....-|..|.|||+.....|++++||||||++||+|++|+.||.....+ ..+...
T Consensus 458 tyFG~a~~~~~~~-----~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~-~ei~~~------ 525 (612)
T KOG0603|consen 458 TYFGFWSELERSC-----DTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAG-IEIHTR------ 525 (612)
T ss_pred EEechhhhCchhh-----cccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCch-HHHHHh------
Confidence 9999998776551 1223588999999999999999999999999999999999999754322 111110
Q ss_pred CchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHH
Q 039533 863 DDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHE 927 (949)
Q Consensus 863 ~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 927 (949)
...+.. ....+....+++..|++.||.+||+|.|+...
T Consensus 526 ---------i~~~~~------------------s~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~h 563 (612)
T KOG0603|consen 526 ---------IQMPKF------------------SECVSDEAKDLLQQLLQVDPALRLGADEIGAH 563 (612)
T ss_pred ---------hcCCcc------------------ccccCHHHHHHHHHhccCChhhCcChhhhccC
Confidence 000100 02445567889999999999999999998653
No 390
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=99.97 E-value=2.1e-31 Score=271.55 Aligned_cols=276 Identities=23% Similarity=0.347 Sum_probs=219.5
Q ss_pred HHHHHHhcCCCCCCeeeeecCceEEEEEEcCCC-----EEEEEEEEecCC-CcchHHHHHHHHHHHhcCCCcceeEEeee
Q 039533 619 QDLYNATSGFSSANLVGVGSFGSVYKGIIDEGR-----TTIAVKVFNLQH-HGASRSFIAECKALKSIRHRNLVKVLTAC 692 (949)
Q Consensus 619 ~~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~-----~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~ 692 (949)
+++.....+++....+-+|.||.||+|.+.+.. +.|.+|.++... .-....+..|.-.+..+.|||+.++.+++
T Consensus 277 ~~l~v~r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~V~ 356 (563)
T KOG1024|consen 277 QELTVQRCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLGVS 356 (563)
T ss_pred HhhhhhhhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeEEE
Confidence 345555567788888999999999999776432 346677665332 22346788898899999999999999998
Q ss_pred ecccccCCccceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCe
Q 039533 693 LGADYRGNDFKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNV 772 (949)
Q Consensus 693 ~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NI 772 (949)
.+. ....++.|.++.-|+|..|+..+++.+. ...+.++..+...++.|++.|++|||++ +|||.||..+|.
T Consensus 357 ie~----~~~P~V~y~~~~~gNLK~FL~~Cr~~~~--~~aqtvtt~qlV~masQla~am~hlh~~---~ViHkDiAaRNC 427 (563)
T KOG1024|consen 357 IED----YATPFVLYPATGVGNLKSFLQICRGDDP--SYAQTVTTIQLVLMASQLAMAMEHLHNH---GVIHKDIAARNC 427 (563)
T ss_pred eec----cCcceEEEeccCcchHHHHHHHhccCCC--ccccchhHHHHHHHHHHHHHHHHHHHhc---Ccccchhhhhcc
Confidence 653 3478899999999999999986664432 3456688889999999999999999977 999999999999
Q ss_pred eecCCCceEEeecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHh-CCCCCccccccCc
Q 039533 773 LLDDYMTARVGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVI-GKKPIDIMFEGDI 851 (949)
Q Consensus 773 ll~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~ellt-g~~Pf~~~~~~~~ 851 (949)
+||+..++||+|=.+++.+-+.....-.........||+||.+....|+.++|||||||++|||+| |+.||.+..+.+
T Consensus 428 vIdd~LqVkltDsaLSRDLFP~DYhcLGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeIDPfE- 506 (563)
T KOG1024|consen 428 VIDDQLQVKLTDSALSRDLFPGDYHCLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEIDPFE- 506 (563)
T ss_pred eehhheeEEeccchhccccCcccccccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccccCHHH-
Confidence 999999999999999998877665444444556788999999999999999999999999999999 999986442221
Q ss_pred hhhhhccccCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHHh
Q 039533 852 NLHNFGRKALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHELQSI 931 (949)
Q Consensus 852 ~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i 931 (949)
+...+ ..+.|...+..||.++..++..||+.+|++||+++|+..-|.+.
T Consensus 507 -------------m~~yl------------------kdGyRlaQP~NCPDeLf~vMacCWallpeeRPsf~Qlv~cLseF 555 (563)
T KOG1024|consen 507 -------------MEHYL------------------KDGYRLAQPFNCPDELFTVMACCWALLPEERPSFSQLVICLSEF 555 (563)
T ss_pred -------------HHHHH------------------hccceecCCCCCcHHHHHHHHHHHhcCcccCCCHHHHHHHHHHH
Confidence 11110 11223334458899999999999999999999999999999987
Q ss_pred HHhh
Q 039533 932 KNIL 935 (949)
Q Consensus 932 ~~~~ 935 (949)
-..+
T Consensus 556 ~~ql 559 (563)
T KOG1024|consen 556 HTQL 559 (563)
T ss_pred HHHH
Confidence 6554
No 391
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=99.97 E-value=1.5e-31 Score=273.89 Aligned_cols=278 Identities=19% Similarity=0.226 Sum_probs=200.5
Q ss_pred hcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCCcchHHHHHHHHHHHhcC--CCc----ceeEEeeeeccccc
Q 039533 625 TSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHGASRSFIAECKALKSIR--HRN----LVKVLTACLGADYR 698 (949)
Q Consensus 625 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~--h~n----iv~~~~~~~~~~~~ 698 (949)
+.+|.+...+|+|.||.|-++.+...+..||||+++.... ..+..+-|+++++++. .|+ +|.+.++| +
T Consensus 88 ~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~k-YreAa~iEi~vLqki~~~DP~g~~rcv~m~~wF-----d 161 (415)
T KOG0671|consen 88 TNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNVDK-YREAALIEIEVLQKINESDPNGKFRCVQMRDWF-----D 161 (415)
T ss_pred ccceehhhhhcCCcccceEEEeecCCCceehHHHHHHHHH-HhhHHHHHHHHHHHHHhcCCCCceEEEeeehhh-----h
Confidence 6789999999999999999999998899999999874432 2345678999999993 232 66666664 3
Q ss_pred CCccceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeec---
Q 039533 699 GNDFKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLD--- 775 (949)
Q Consensus 699 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~--- 775 (949)
...+.|+|+|.+ |.|+++++... ...+++...++.++.|++++++|||+. +++|-||||+||++.
T Consensus 162 yrghiCivfell-G~S~~dFlk~N--------~y~~fpi~~ir~m~~QL~~sv~fLh~~---kl~HTDLKPENILfvss~ 229 (415)
T KOG0671|consen 162 YRGHICIVFELL-GLSTFDFLKEN--------NYIPFPIDHIRHMGYQLLESVAFLHDL---KLTHTDLKPENILFVSSE 229 (415)
T ss_pred ccCceEEEEecc-ChhHHHHhccC--------CccccchHHHHHHHHHHHHHHHHHHhc---ceeecCCChheEEEeccc
Confidence 445899999998 66999999732 345688999999999999999999977 999999999999983
Q ss_pred -----------------CCCceEEeecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHh
Q 039533 776 -----------------DYMTARVGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVI 838 (949)
Q Consensus 776 -----------------~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~ellt 838 (949)
.+..+|++|||.|+....... ..+.|..|+|||++.+-.++.++||||+||||+|+.|
T Consensus 230 ~~~~~~~k~~~~~~r~~ks~~I~vIDFGsAtf~~e~hs-----~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~Elyt 304 (415)
T KOG0671|consen 230 YFKTYNPKKKVCFIRPLKSTAIKVIDFGSATFDHEHHS-----TIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYT 304 (415)
T ss_pred eEEEeccCCccceeccCCCcceEEEecCCcceeccCcc-----eeeeccccCCchheeccCcCCccCceeeeeEEEEeec
Confidence 134689999999987654442 4568999999999999999999999999999999999
Q ss_pred CCCCCccccccC-chhhhhccccCCCchh------hhcccCCCCCchhhhhhh------chhhhhhh-hhhHHHHHHHHH
Q 039533 839 GKKPIDIMFEGD-INLHNFGRKALPDDVM------DIVDSSLLPDDEDLILTG------NQRQKQAR-INSIIECLISMV 904 (949)
Q Consensus 839 g~~Pf~~~~~~~-~~~~~~~~~~~~~~~~------~~~d~~l~~~~~~~~~~~------~~~~~~~~-~~~~~~~~~~l~ 904 (949)
|...|+.....+ ..+++.+-..+|..+. +.+... .-++.+....+ ....+... ...-..+...+.
T Consensus 305 G~~LFqtHen~EHLaMMerIlGp~P~~mi~r~~~~Kyf~~~-rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~Lf 383 (415)
T KOG0671|consen 305 GETLFQTHENLEHLAMMERILGPIPSRMIKKTRKEKYFRRG-RLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLF 383 (415)
T ss_pred cceecccCCcHHHHHHHHHhhCCCcHHHhhhhhhHhhhhcc-cccCccccccccchhhhcCCccHHHHhccCcHHHhHHH
Confidence 999997554211 1222222222222211 111111 11111100000 00000000 011124456799
Q ss_pred HHhhccccCCCCCCCCHHHHHH
Q 039533 905 RIGVACSMELPQDRTNMTNVVH 926 (949)
Q Consensus 905 ~l~~~cl~~dP~~RPs~~ev~~ 926 (949)
+++.+|+..||.+|+|+.|++.
T Consensus 384 DLl~~mL~fDP~~RiTl~EAL~ 405 (415)
T KOG0671|consen 384 DLLRRMLEFDPARRITLREALS 405 (415)
T ss_pred HHHHHHHccCccccccHHHHhc
Confidence 9999999999999999999875
No 392
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=1.2e-31 Score=274.43 Aligned_cols=202 Identities=25% Similarity=0.301 Sum_probs=170.9
Q ss_pred hcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCC---cchHHHHHHHHHHHhc-CCCcceeEEeeeecccccCC
Q 039533 625 TSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHH---GASRSFIAECKALKSI-RHRNLVKVLTACLGADYRGN 700 (949)
Q Consensus 625 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~ 700 (949)
..+|....+||+|+||.|.+|+.+.+.+.+|||+++..-. .+.+--+.|-++|..- +-|.++++..+|...+
T Consensus 348 ~tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmD---- 423 (683)
T KOG0696|consen 348 ATDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMD---- 423 (683)
T ss_pred ecccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhh----
Confidence 3578889999999999999999998889999999975421 2233445677777766 5788999888866555
Q ss_pred ccceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCce
Q 039533 701 DFKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTA 780 (949)
Q Consensus 701 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~ 780 (949)
..|+||||+.||+|-..++ +-+.+.+..+.-+|.+||-||-+||++ ||+.||||.+|||+|.+|++
T Consensus 424 -RLyFVMEyvnGGDLMyhiQ----------Q~GkFKEp~AvFYAaEiaigLFFLh~k---gIiYRDLKLDNvmLd~eGHi 489 (683)
T KOG0696|consen 424 -RLYFVMEYVNGGDLMYHIQ----------QVGKFKEPVAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDSEGHI 489 (683)
T ss_pred -heeeEEEEecCchhhhHHH----------HhcccCCchhhhhhHHHHHHhhhhhcC---CeeeeeccccceEeccCCce
Confidence 8999999999999998887 334566778889999999999999977 99999999999999999999
Q ss_pred EEeecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccc
Q 039533 781 RVGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIM 846 (949)
Q Consensus 781 kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~ 846 (949)
||+|||+++.--.+...+. ...||+.|+|||++..++|+..+|.|||||++|||+.|++||+..
T Consensus 490 Ki~DFGmcKEni~~~~TTk--TFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGe 553 (683)
T KOG0696|consen 490 KIADFGMCKENIFDGVTTK--TFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGE 553 (683)
T ss_pred EeeecccccccccCCccee--eecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCC
Confidence 9999999986443333222 467999999999999999999999999999999999999999754
No 393
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=99.97 E-value=2.1e-31 Score=249.53 Aligned_cols=210 Identities=22% Similarity=0.256 Sum_probs=171.7
Q ss_pred hcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCC-CcchHHHHHHHHHHHhc-CCCcceeEEeeeecccccCCcc
Q 039533 625 TSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQH-HGASRSFIAECKALKSI-RHRNLVKVLTACLGADYRGNDF 702 (949)
Q Consensus 625 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~ 702 (949)
.++...+..||+|+||.|-+-++..+|...|+|.++..- ....++..+|+.+..+- .+|.+|++||..... ..
T Consensus 45 ad~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~re-----gd 119 (282)
T KOG0984|consen 45 ADDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFRE-----GD 119 (282)
T ss_pred hhhhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhhcc-----cc
Confidence 344455678999999999999999999999999997543 34456788888876665 799999999975433 37
Q ss_pred ceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEE
Q 039533 703 KASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARV 782 (949)
Q Consensus 703 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl 782 (949)
.++.||.|. .||+.+.. +.-..+..+++...-+||..+++||.|||++. .++|||+||+|||++.+|++|+
T Consensus 120 vwIcME~M~-tSldkfy~------~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL--~vIHRDvKPsNiLIn~~GqVKi 190 (282)
T KOG0984|consen 120 VWICMELMD-TSLDKFYR------KVLKKGGTIPEDVLGKIAVSVVHALEFLHSKL--SVIHRDVKPSNILINYDGQVKI 190 (282)
T ss_pred EEEeHHHhh-hhHHHHHH------HHHhcCCcCchHHhhHhHHHHHHHHHHHHHHh--hhhhccCCcceEEEccCCcEEE
Confidence 899999996 48887764 22235667888889999999999999999875 9999999999999999999999
Q ss_pred eecccceecCCCCCccccccccCccCccCccccCC----CccCCccchHHHHHHHHHHHhCCCCCccccccCc
Q 039533 783 GDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVG----CEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDI 851 (949)
Q Consensus 783 ~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~----~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~ 851 (949)
||||++-.+.++...+. ..|-..|||||.+.. ..|+.|+||||+|+++.||.+++.||+.+.....
T Consensus 191 CDFGIsG~L~dSiAkt~---daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w~tpF~ 260 (282)
T KOG0984|consen 191 CDFGISGYLVDSIAKTM---DAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESWGTPFQ 260 (282)
T ss_pred cccccceeehhhhHHHH---hcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccccCCHHH
Confidence 99999988766554332 348889999998654 3699999999999999999999999987654433
No 394
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=99.97 E-value=1.3e-30 Score=274.37 Aligned_cols=223 Identities=19% Similarity=0.131 Sum_probs=175.0
Q ss_pred ecCceEEEEEEcCCCEEEEEEEEecCCCcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCccceeEeeeccCCChh
Q 039533 637 GSFGSVYKGIIDEGRTTIAVKVFNLQHHGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFKASVYEFMHYGSLE 716 (949)
Q Consensus 637 G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~gsL~ 716 (949)
|.+|.||+|++..+++.||+|+++... .+.+|...+....||||+++++++...+ ..++||||+++|+|.
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~-----~~~~~~~~~~~~~~~~i~~~~~~~~~~~-----~~~lv~e~~~~~~L~ 73 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSS-----EYSRERLTIIPHCVPNMVCLHKYIVSED-----SVFLVLQHAEGGKLW 73 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchh-----hhhhHHHHHHhcCCCceeehhhheecCC-----eEEEEEecCCCCCHH
Confidence 899999999999999999999986543 2334555555667999999999875443 789999999999999
Q ss_pred hhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEeecccceecCCCCC
Q 039533 717 EWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVGDFGLARILSPDHT 796 (949)
Q Consensus 717 ~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~~~ 796 (949)
+++.. ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.++++|||.+........
T Consensus 74 ~~l~~----------~~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~~~ 140 (237)
T cd05576 74 SHISK----------FLNIPEECVKRWAAEMVVALDALHRE---GIVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDSCD 140 (237)
T ss_pred HHHHH----------hcCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEEcCCCCEEEecccchhccccccc
Confidence 99862 23488999999999999999999976 999999999999999999999999998866543221
Q ss_pred ccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhccccCCCchhhhcccCCCCC
Q 039533 797 QTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKALPDDVMDIVDSSLLPD 876 (949)
Q Consensus 797 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 876 (949)
...++..|+|||...+..++.++||||+|+++|||++|+.|++..... ........+
T Consensus 141 -----~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~---------------~~~~~~~~~--- 197 (237)
T cd05576 141 -----GEAVENMYCAPEVGGISEETEACDWWSLGAILFELLTGKTLVECHPSG---------------INTHTTLNI--- 197 (237)
T ss_pred -----cCCcCccccCCcccCCCCCCchhhHHHHHHHHHHHHHCcchhhcCchh---------------cccccccCC---
Confidence 233677899999998888999999999999999999999887422100 000000000
Q ss_pred chhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHH
Q 039533 877 DEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNV 924 (949)
Q Consensus 877 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev 924 (949)
.......+.+++.+|++.||++||++.+.
T Consensus 198 -------------------~~~~~~~~~~li~~~l~~dp~~R~~~~~~ 226 (237)
T cd05576 198 -------------------PEWVSEEARSLLQQLLQFNPTERLGAGVA 226 (237)
T ss_pred -------------------cccCCHHHHHHHHHHccCCHHHhcCCCcc
Confidence 01223457889999999999999997443
No 395
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=99.97 E-value=6.3e-30 Score=298.20 Aligned_cols=280 Identities=15% Similarity=0.129 Sum_probs=172.2
Q ss_pred HhcCCCCCCeeeeecCceEEEEEEcCC----CEEEEEEEEecCCCcchHHHHHHHHHHHhcCCCcceeEEeeeeccc-cc
Q 039533 624 ATSGFSSANLVGVGSFGSVYKGIIDEG----RTTIAVKVFNLQHHGASRSFIAECKALKSIRHRNLVKVLTACLGAD-YR 698 (949)
Q Consensus 624 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~----~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~-~~ 698 (949)
..++|.+.+.||+|+||.||+|++..+ +..||+|++..... .+....| .+....+.++..++..+.... ..
T Consensus 130 ~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~--~e~~~~e--~l~~~~~~~~~~~~~~~~~~~~~~ 205 (566)
T PLN03225 130 KKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGA--VEIWMNE--RVRRACPNSCADFVYGFLEPVSSK 205 (566)
T ss_pred ccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccch--hHHHHHH--HHHhhchhhHHHHHHhhhcccccc
Confidence 567899999999999999999999887 89999998753221 1111111 112222233333222211111 13
Q ss_pred CCccceeEeeeccCCChhhhcCCCCCCCcc----------ccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCC
Q 039533 699 GNDFKASVYEFMHYGSLEEWLHPFTGEDEI----------DEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLK 768 (949)
Q Consensus 699 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~----------~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlk 768 (949)
.....++||||+++++|.+++......... ...........+..++.|++.||+|||++ +|+|||||
T Consensus 206 ~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~---gIiHRDLK 282 (566)
T PLN03225 206 KEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHST---GIVHRDVK 282 (566)
T ss_pred cCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHC---CEEeCcCC
Confidence 445789999999999999998632100000 00011122345668999999999999977 89999999
Q ss_pred CCCeeecC-CCceEEeecccceecCCCCCccccccccCccCccCccccCCC----------------------ccCCccc
Q 039533 769 PSNVLLDD-YMTARVGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGC----------------------EVSTNGD 825 (949)
Q Consensus 769 p~NIll~~-~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----------------------~~~~~sD 825 (949)
|+|||+++ ++.+||+|||+|+......... .....+++.|+|||.+... .++.++|
T Consensus 283 P~NILl~~~~~~~KL~DFGlA~~l~~~~~~~-~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~D 361 (566)
T PLN03225 283 PQNIIFSEGSGSFKIIDLGAAADLRVGINYI-PKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRFD 361 (566)
T ss_pred HHHEEEeCCCCcEEEEeCCCccccccccccC-CcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCcc
Confidence 99999985 5899999999998654332211 1235689999999965322 2345679
Q ss_pred hHHHHHHHHHHHhCCCCCccccccCchhhhhccc-cCC-CchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHH
Q 039533 826 VYSYGILLLELVIGKKPIDIMFEGDINLHNFGRK-ALP-DDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISM 903 (949)
Q Consensus 826 iwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~-~~~-~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 903 (949)
||||||++|||+++..|++.... .+...... ... ..+...+.+....+. ...++.........
T Consensus 362 VwSlGviL~el~~~~~~~~~~~~---~~~~~l~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~d~~~~~~ 426 (566)
T PLN03225 362 IYSAGLIFLQMAFPNLRSDSNLI---QFNRQLKRNDYDLVAWRKLVEPRASPDL------------RRGFEVLDLDGGAG 426 (566)
T ss_pred cHHHHHHHHHHHhCcCCCchHHH---HHHHHHHhcCCcHHHHHHhhccccchhh------------hhhhhhccccchHH
Confidence 99999999999998777542210 00000000 000 001111111100000 00000011112345
Q ss_pred HHHhhccccCCCCCCCCHHHHHH
Q 039533 904 VRIGVACSMELPQDRTNMTNVVH 926 (949)
Q Consensus 904 ~~l~~~cl~~dP~~RPs~~ev~~ 926 (949)
.+++.+|++.||++|||++|+++
T Consensus 427 ~dLi~~mL~~dP~kR~ta~e~L~ 449 (566)
T PLN03225 427 WELLKSMMRFKGRQRISAKAALA 449 (566)
T ss_pred HHHHHHHccCCcccCCCHHHHhC
Confidence 68999999999999999999986
No 396
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=3.5e-32 Score=264.32 Aligned_cols=203 Identities=24% Similarity=0.317 Sum_probs=170.2
Q ss_pred CCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecC--CCcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCcccee
Q 039533 628 FSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQ--HHGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFKAS 705 (949)
Q Consensus 628 y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 705 (949)
.+..+.||.|+||.||.+++..+|+.||.|++... .-...+++.+|++++.-++|.|+...++.......+--++.|+
T Consensus 55 i~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiYV 134 (449)
T KOG0664|consen 55 IQPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELYV 134 (449)
T ss_pred CCCCCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHHH
Confidence 45568999999999999999999999999998632 2334578999999999999999999887755443333345788
Q ss_pred EeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEeec
Q 039533 706 VYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVGDF 785 (949)
Q Consensus 706 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~Df 785 (949)
++|.|. .+|.+.+- .+..++...+.-+.+||++||+|||+. +|.||||||.|.+++.+..+||+||
T Consensus 135 ~TELmQ-SDLHKIIV----------SPQ~Ls~DHvKVFlYQILRGLKYLHsA---~ILHRDIKPGNLLVNSNCvLKICDF 200 (449)
T KOG0664|consen 135 LTELMQ-SDLHKIIV----------SPQALTPDHVKVFVYQILRGLKYLHTA---NILHRDIKPGNLLVNSNCILKICDF 200 (449)
T ss_pred HHHHHH-hhhhheec----------cCCCCCcchhhhhHHHHHhhhHHHhhc---chhhccCCCccEEeccCceEEeccc
Confidence 899985 47887775 567788889999999999999999987 9999999999999999999999999
Q ss_pred ccceecCCCCCccccccccCccCccCccccCCC-ccCCccchHHHHHHHHHHHhCCCCCcc
Q 039533 786 GLARILSPDHTQTSSFSVKGSLGYIAPEYGVGC-EVSTNGDVYSYGILLLELVIGKKPIDI 845 (949)
Q Consensus 786 G~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDiwSlGvvl~elltg~~Pf~~ 845 (949)
|+|+.-..+...... ..+-|..|+|||+++|. .|+.+.||||.||++.|++..+..|+.
T Consensus 201 GLARvee~d~~~hMT-qEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQA 260 (449)
T KOG0664|consen 201 GLARTWDQRDRLNMT-HEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQA 260 (449)
T ss_pred ccccccchhhhhhhH-HHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhc
Confidence 999987665543332 34468899999999986 489999999999999999999988864
No 397
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.96 E-value=1.3e-30 Score=247.55 Aligned_cols=269 Identities=19% Similarity=0.258 Sum_probs=205.0
Q ss_pred HHhcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCCcchHHHHHHHHHHHhcC-CCcceeEEeeeecccccCCc
Q 039533 623 NATSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHGASRSFIAECKALKSIR-HRNLVKVLTACLGADYRGND 701 (949)
Q Consensus 623 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~~ 701 (949)
...++|++.+++|+|.|+.||.|....+.++++||++++.. .+.+.+|+.+++.+. ||||+++++...++. ..
T Consensus 35 g~~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPVk---kkKIkREikIL~nL~gg~NIi~L~DiV~Dp~---Sk 108 (338)
T KOG0668|consen 35 GNQDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPVK---KKKIKREIKILQNLRGGPNIIKLLDIVKDPE---SK 108 (338)
T ss_pred cccchHHHHHHHcCccHhhHhcccccCCCceEEEeeechHH---HHHHHHHHHHHHhccCCCCeeehhhhhcCcc---cc
Confidence 34578999999999999999999988889999999997554 467889999999996 999999999877654 34
Q ss_pred cceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecC-CCce
Q 039533 702 FKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDD-YMTA 780 (949)
Q Consensus 702 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~-~~~~ 780 (949)
...+++||+.+.+...... .++..+++.++.+++.||.|+|+. ||+|||+||.|+++|. ...+
T Consensus 109 tpaLiFE~v~n~Dfk~ly~-------------tl~d~dIryY~~elLkALdyCHS~---GImHRDVKPhNvmIdh~~rkL 172 (338)
T KOG0668|consen 109 TPSLIFEYVNNTDFKQLYP-------------TLTDYDIRYYIYELLKALDYCHSM---GIMHRDVKPHNVMIDHELRKL 172 (338)
T ss_pred CchhHhhhhccccHHHHhh-------------hhchhhHHHHHHHHHHHHhHHHhc---CcccccCCcceeeechhhcee
Confidence 6789999999988776653 477778999999999999999977 9999999999999994 4579
Q ss_pred EEeecccceecCCCCCccccccccCccCccCccccCCC-ccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhccc
Q 039533 781 RVGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGC-EVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRK 859 (949)
Q Consensus 781 kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~ 859 (949)
+|+|+|+|.++-+...... .+.+..|.-||.+..- .|+..-|+|||||++..|+..+.||-........++..+.-
T Consensus 173 rlIDWGLAEFYHp~~eYnV---RVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIakV 249 (338)
T KOG0668|consen 173 RLIDWGLAEFYHPGKEYNV---RVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKV 249 (338)
T ss_pred eeeecchHhhcCCCceeee---eeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHHH
Confidence 9999999999888776543 3467889999988764 58899999999999999999999995443332333322211
Q ss_pred c---------------CCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHH
Q 039533 860 A---------------LPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNV 924 (949)
Q Consensus 860 ~---------------~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev 924 (949)
. ++++..+++...-...+...+....+. -..++..+++.+.+..|-++||||+|.
T Consensus 250 LGt~el~~Yl~KY~i~Ldp~~~~i~~~~~rk~w~~Fi~~~n~h----------l~~peaiDlldklLrYDHqeRlTakEa 319 (338)
T KOG0668|consen 250 LGTDELYAYLNKYQIDLDPQFEDILGRHSRKPWSRFINSENQH----------LVSPEAIDLLDKLLRYDHQERLTAKEA 319 (338)
T ss_pred hChHHHHHHHHHHccCCChhHhhHhhccccccHHHhCCccccc----------cCChHHHHHHHHHHhhccccccchHHH
Confidence 1 222333333333222222222211111 112456788999999999999999998
Q ss_pred HH
Q 039533 925 VH 926 (949)
Q Consensus 925 ~~ 926 (949)
+.
T Consensus 320 m~ 321 (338)
T KOG0668|consen 320 MA 321 (338)
T ss_pred hc
Confidence 75
No 398
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=9.4e-30 Score=267.21 Aligned_cols=136 Identities=25% Similarity=0.381 Sum_probs=117.8
Q ss_pred cCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCCcchHHHHHHHHHHHhcC-----C---CcceeEEeeeecccc
Q 039533 626 SGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHGASRSFIAECKALKSIR-----H---RNLVKVLTACLGADY 697 (949)
Q Consensus 626 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-----h---~niv~~~~~~~~~~~ 697 (949)
.+|.+.++||-|.|++||+|.+..+.+.||+|+.+... ...+....||++|++++ | .+||++++.|...+
T Consensus 78 gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSAq-hYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~FkhsG- 155 (590)
T KOG1290|consen 78 GRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSAQ-HYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHSG- 155 (590)
T ss_pred ceEEEEEeccccccceeEEEeeccCCeEEEEEEEehhh-HHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceecC-
Confidence 67999999999999999999999999999999997543 34567789999999993 3 37999999998776
Q ss_pred cCCccceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeee
Q 039533 698 RGNDFKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLL 774 (949)
Q Consensus 698 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll 774 (949)
.++.+.|+|+|++ |.+|-.++... ..+.++...+.+|++||+.||.|||.+| +|||-||||+|||+
T Consensus 156 pNG~HVCMVfEvL-GdnLLklI~~s--------~YrGlpl~~VK~I~~qvL~GLdYLH~ec--gIIHTDlKPENvLl 221 (590)
T KOG1290|consen 156 PNGQHVCMVFEVL-GDNLLKLIKYS--------NYRGLPLSCVKEICRQVLTGLDYLHREC--GIIHTDLKPENVLL 221 (590)
T ss_pred CCCcEEEEEehhh-hhHHHHHHHHh--------CCCCCcHHHHHHHHHHHHHHHHHHHHhc--CccccCCCcceeee
Confidence 4566899999999 67898888632 3456899999999999999999999998 99999999999999
No 399
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=99.96 E-value=3.3e-29 Score=284.05 Aligned_cols=279 Identities=15% Similarity=0.164 Sum_probs=183.3
Q ss_pred HhcCCCCCCeeeeecCceEEEEEEc----------------CCCEEEEEEEEecCCCcchH--------------HHHHH
Q 039533 624 ATSGFSSANLVGVGSFGSVYKGIID----------------EGRTTIAVKVFNLQHHGASR--------------SFIAE 673 (949)
Q Consensus 624 ~~~~y~~~~~lg~G~~g~Vy~~~~~----------------~~~~~vavK~~~~~~~~~~~--------------~~~~E 673 (949)
..++|.+.++||+|+||.||+|... ..++.||||++........+ ....|
T Consensus 143 ~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE 222 (507)
T PLN03224 143 SSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVE 222 (507)
T ss_pred cccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHH
Confidence 4678999999999999999999752 24568999998654332222 23457
Q ss_pred HHHHHhcCCCcc-----eeEEeeeeccccc---CCccceeEeeeccCCChhhhcCCCCCCC------------c--cccC
Q 039533 674 CKALKSIRHRNL-----VKVLTACLGADYR---GNDFKASVYEFMHYGSLEEWLHPFTGED------------E--IDEA 731 (949)
Q Consensus 674 ~~~l~~l~h~ni-----v~~~~~~~~~~~~---~~~~~~lv~e~~~~gsL~~~l~~~~~~~------------~--~~~~ 731 (949)
+.++.+++|.++ ++++++|.....+ .....++||||+++++|.++++...+.. . ....
T Consensus 223 ~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~ 302 (507)
T PLN03224 223 AYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMP 302 (507)
T ss_pred HHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcc
Confidence 777777766544 6777777543211 2346799999999999999997422110 0 0011
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEeecccceecCCCCCccccccccCccCccC
Q 039533 732 PRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVGDFGLARILSPDHTQTSSFSVKGSLGYIA 811 (949)
Q Consensus 732 ~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~a 811 (949)
...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.......... ....+++.|+|
T Consensus 303 ~~~~~~~~~~~i~~ql~~aL~~lH~~---~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~-~~g~~tp~Y~a 378 (507)
T PLN03224 303 QDKRDINVIKGVMRQVLTGLRKLHRI---GIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGINFNP-LYGMLDPRYSP 378 (507)
T ss_pred cccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCchHhEEECCCCcEEEEeCcCccccccCCccCc-cccCCCcceeC
Confidence 23467888999999999999999977 899999999999999999999999999976543322111 12235789999
Q ss_pred ccccCCCc--------------------c--CCccchHHHHHHHHHHHhCCC-CCccccccCchhhhhccccCCCchhhh
Q 039533 812 PEYGVGCE--------------------V--STNGDVYSYGILLLELVIGKK-PIDIMFEGDINLHNFGRKALPDDVMDI 868 (949)
Q Consensus 812 PE~~~~~~--------------------~--~~~sDiwSlGvvl~elltg~~-Pf~~~~~~~~~~~~~~~~~~~~~~~~~ 868 (949)
||.+.... + ..+.||||+||++|||++|.. ||............ .......+
T Consensus 379 PE~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~-----~~~~~~~~ 453 (507)
T PLN03224 379 PEELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQ-----YDNDLNRW 453 (507)
T ss_pred hhhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhh-----ccchHHHH
Confidence 99875422 1 234799999999999999885 66432111111000 00000000
Q ss_pred cccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCC---CCCCCHHHHHH
Q 039533 869 VDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELP---QDRTNMTNVVH 926 (949)
Q Consensus 869 ~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP---~~RPs~~ev~~ 926 (949)
...... ...++..........+++.+++..+| .+|+|++|+++
T Consensus 454 -r~~~~~--------------~~~~~~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~ 499 (507)
T PLN03224 454 -RMYKGQ--------------KYDFSLLDRNKEAGWDLACKLITKRDQANRGRLSVGQALS 499 (507)
T ss_pred -Hhhccc--------------CCCcccccccChHHHHHHHHHhccCCCCcccCCCHHHHhC
Confidence 000000 00011112334567888889998766 68999999975
No 400
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=99.96 E-value=3.6e-29 Score=264.34 Aligned_cols=239 Identities=27% Similarity=0.334 Sum_probs=190.2
Q ss_pred cCceEEEEEEcCCCEEEEEEEEecCCCcc-hHHHHHHHHHHHhcCCCcceeEEeeeecccccCCccceeEeeeccCCChh
Q 039533 638 SFGSVYKGIIDEGRTTIAVKVFNLQHHGA-SRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFKASVYEFMHYGSLE 716 (949)
Q Consensus 638 ~~g~Vy~~~~~~~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~gsL~ 716 (949)
+||.||+|+...+++.+|+|++....... .+.+.+|++.+++++|+|++++++++.... ..+++|||+++++|.
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~-----~~~l~~e~~~~~~L~ 75 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFEDED-----KLYLVMEYCDGGDLF 75 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhheeeCC-----EEEEEEeCCCCCCHH
Confidence 58999999998888999999997655444 678999999999999999999999876543 789999999999999
Q ss_pred hhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEeecccceecCCCCC
Q 039533 717 EWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVGDFGLARILSPDHT 796 (949)
Q Consensus 717 ~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~~~ 796 (949)
+++.. ...+++..+..++.+++.++.|||+. +++|+||+|+||++++++.++|+|||.+........
T Consensus 76 ~~~~~----------~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~~ 142 (244)
T smart00220 76 DLLKK----------RGRLSEDEARFYARQILSALEYLHSN---GIIHRDLKPENILLDEDGHVKLADFGLARQLDPGGL 142 (244)
T ss_pred HHHHh----------ccCCCHHHHHHHHHHHHHHHHHHHHc---CeecCCcCHHHeEECCCCcEEEccccceeeeccccc
Confidence 99862 12278899999999999999999977 999999999999999999999999999987765431
Q ss_pred ccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhccccCCCchhhhcccCCCCC
Q 039533 797 QTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKALPDDVMDIVDSSLLPD 876 (949)
Q Consensus 797 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 876 (949)
.....++..|+|||...+..++.++||||||+++|++++|..||....... .. .+.........
T Consensus 143 ---~~~~~~~~~~~~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~~-~~------------~~~~~~~~~~~ 206 (244)
T smart00220 143 ---LTTFVGTPEYMAPEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGDDQLL-EL------------FKKIGKPKPPF 206 (244)
T ss_pred ---cccccCCcCCCCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcHH-HH------------HHHHhccCCCC
Confidence 113458889999999988888999999999999999999999986421110 00 01110000000
Q ss_pred chhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 039533 877 DEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVH 926 (949)
Q Consensus 877 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 926 (949)
.. .....+..+.+++.+|+..+|++||++.++++
T Consensus 207 ~~----------------~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~~~ 240 (244)
T smart00220 207 PP----------------PEWKISPEAKDLIRKLLVKDPEKRLTAEEALQ 240 (244)
T ss_pred cc----------------ccccCCHHHHHHHHHHccCCchhccCHHHHhh
Confidence 00 00003457889999999999999999999986
No 401
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=8.4e-31 Score=275.19 Aligned_cols=201 Identities=24% Similarity=0.338 Sum_probs=174.6
Q ss_pred hcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCC---cchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCc
Q 039533 625 TSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHH---GASRSFIAECKALKSIRHRNLVKVLTACLGADYRGND 701 (949)
Q Consensus 625 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 701 (949)
.+++.++..||-|+||.|-++..+.....+|+|++++.+. ...+....|-.+|...+.|.||++|-.| ++..
T Consensus 419 l~dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTf-----rd~k 493 (732)
T KOG0614|consen 419 LSDLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTF-----RDSK 493 (732)
T ss_pred hhhhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHh-----ccch
Confidence 3566777889999999999999886555689999875543 2335677899999999999999999874 4555
Q ss_pred cceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceE
Q 039533 702 FKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTAR 781 (949)
Q Consensus 702 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~k 781 (949)
+.|++||.|-||.++..+. ..+.++..+++-++..+++|++|||++ +||.|||||+|.++|.+|-+|
T Consensus 494 yvYmLmEaClGGElWTiLr----------dRg~Fdd~tarF~~acv~EAfeYLH~k---~iIYRDLKPENllLd~~Gy~K 560 (732)
T KOG0614|consen 494 YVYMLMEACLGGELWTILR----------DRGSFDDYTARFYVACVLEAFEYLHRK---GIIYRDLKPENLLLDNRGYLK 560 (732)
T ss_pred hhhhhHHhhcCchhhhhhh----------hcCCcccchhhhhHHHHHHHHHHHHhc---CceeccCChhheeeccCCceE
Confidence 8999999999999999997 456788889999999999999999977 999999999999999999999
Q ss_pred EeecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccc
Q 039533 782 VGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIM 846 (949)
Q Consensus 782 l~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~ 846 (949)
|.|||+|+.+..+.... .+.||+.|.|||++.....+.++|.||+|+++||+++|++||...
T Consensus 561 LVDFGFAKki~~g~KTw---TFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~ 622 (732)
T KOG0614|consen 561 LVDFGFAKKIGSGRKTW---TFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGV 622 (732)
T ss_pred EeehhhHHHhccCCcee---eecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCC
Confidence 99999999987665422 467999999999999999999999999999999999999999643
No 402
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=2e-29 Score=251.62 Aligned_cols=202 Identities=25% Similarity=0.317 Sum_probs=174.8
Q ss_pred hcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecC---CCcchHHHHHHHHHHHhc-CCCcceeEEeeeecccccCC
Q 039533 625 TSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQ---HHGASRSFIAECKALKSI-RHRNLVKVLTACLGADYRGN 700 (949)
Q Consensus 625 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~ 700 (949)
.++|...++||+|+|+.|..+++..+.+.+|+|++++. ..+..+-.+.|-.+..+. +||.+|-+..+|....
T Consensus 249 l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtes---- 324 (593)
T KOG0695|consen 249 LQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTES---- 324 (593)
T ss_pred cccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccc----
Confidence 35788999999999999999999999999999999754 334455677788888777 6999999988865444
Q ss_pred ccceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCce
Q 039533 701 DFKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTA 780 (949)
Q Consensus 701 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~ 780 (949)
..++|.||++||+|--+++ ..+.++++.++-+..+|.-||.|||++ ||+.||+|.+|+|+|..|++
T Consensus 325 -rlffvieyv~ggdlmfhmq----------rqrklpeeharfys~ei~lal~flh~r---giiyrdlkldnvlldaeghi 390 (593)
T KOG0695|consen 325 -RLFFVIEYVNGGDLMFHMQ----------RQRKLPEEHARFYSAEICLALNFLHER---GIIYRDLKLDNVLLDAEGHI 390 (593)
T ss_pred -eEEEEEEEecCcceeeehh----------hhhcCcHHHhhhhhHHHHHHHHHHhhc---CeeeeeccccceEEccCCce
Confidence 8999999999999988876 346689999999999999999999987 99999999999999999999
Q ss_pred EEeecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccc
Q 039533 781 RVGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIM 846 (949)
Q Consensus 781 kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~ 846 (949)
|++|||.++.--.+...+. .+.||+.|.|||++.+..|...+|.|++||+++||+.|+.||+..
T Consensus 391 kltdygmcke~l~~gd~ts--tfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdiv 454 (593)
T KOG0695|consen 391 KLTDYGMCKEGLGPGDTTS--TFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIV 454 (593)
T ss_pred eecccchhhcCCCCCcccc--cccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCccee
Confidence 9999999986443333222 467999999999999999999999999999999999999999743
No 403
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=99.96 E-value=3.9e-30 Score=286.79 Aligned_cols=243 Identities=24% Similarity=0.343 Sum_probs=183.9
Q ss_pred CCeeeeecCc-eEEEEEEcCCCEEEEEEEEecCCCcchHHHHHHHHHHHhc-CCCcceeEEeeeecccccCCccceeEee
Q 039533 631 ANLVGVGSFG-SVYKGIIDEGRTTIAVKVFNLQHHGASRSFIAECKALKSI-RHRNLVKVLTACLGADYRGNDFKASVYE 708 (949)
Q Consensus 631 ~~~lg~G~~g-~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~~lv~e 708 (949)
.+++|.|+.| .||+|... ++.||||++-.. ..+...+|+..++.- +|||||++++. ..++++.||..|
T Consensus 514 ~eilG~Gs~Gt~Vf~G~ye--~R~VAVKrll~e---~~~~A~rEi~lL~eSD~H~NviRyyc~-----E~d~qF~YIalE 583 (903)
T KOG1027|consen 514 KEILGYGSNGTVVFRGVYE--GREVAVKRLLEE---FFDFAQREIQLLQESDEHPNVIRYYCS-----EQDRQFLYIALE 583 (903)
T ss_pred HHHcccCCCCcEEEEEeeC--CceehHHHHhhH---hHHHHHHHHHHHHhccCCCceEEEEee-----ccCCceEEEEeh
Confidence 3578999988 58999996 899999987432 235677999999998 59999999866 344568999999
Q ss_pred eccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecC-----CCceEEe
Q 039533 709 FMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDD-----YMTARVG 783 (949)
Q Consensus 709 ~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~-----~~~~kl~ 783 (949)
.|.. +|++++... +.+ . ........+.+..|++.||++||+- +||||||||.||||+. ..+++|+
T Consensus 584 LC~~-sL~dlie~~-~~d-~----~~~~~i~~~~~l~q~~~GlaHLHsl---~iVHRDLkPQNILI~~~~~~~~~ra~iS 653 (903)
T KOG1027|consen 584 LCAC-SLQDLIESS-GLD-V----EMQSDIDPISVLSQIASGLAHLHSL---KIVHRDLKPQNILISVPSADGTLRAKIS 653 (903)
T ss_pred Hhhh-hHHHHHhcc-ccc-h----hhcccccHHHHHHHHHHHHHHHHhc---ccccccCCCceEEEEccCCCcceeEEec
Confidence 9965 999999742 111 0 1111145677899999999999975 9999999999999974 3579999
Q ss_pred ecccceecCCCCCc-cccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhC-CCCCccccccCchhhhhccccC
Q 039533 784 DFGLARILSPDHTQ-TSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIG-KKPIDIMFEGDINLHNFGRKAL 861 (949)
Q Consensus 784 DfG~a~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg-~~Pf~~~~~~~~~~~~~~~~~~ 861 (949)
|||+++.+..+... .......||-+|+|||++....-+.++||||+||++|+.++| ++||....+.+.++..-..
T Consensus 654 DfglsKkl~~~~sS~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~~R~~NIl~~~~--- 730 (903)
T KOG1027|consen 654 DFGLSKKLAGGKSSFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLERQANILTGNY--- 730 (903)
T ss_pred ccccccccCCCcchhhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchHHhhhhhhcCcc---
Confidence 99999998776552 223356699999999999998888999999999999999995 9999765443333221110
Q ss_pred CCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHH
Q 039533 862 PDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVV 925 (949)
Q Consensus 862 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~ 925 (949)
.++ .+.+.. ++ +..+++.+|++++|..||+|.+|+
T Consensus 731 -----~L~--~L~~~~--------------------d~--eA~dLI~~ml~~dP~~RPsa~~VL 765 (903)
T KOG1027|consen 731 -----TLV--HLEPLP--------------------DC--EAKDLISRMLNPDPQLRPSATDVL 765 (903)
T ss_pred -----cee--eeccCc--------------------hH--HHHHHHHHhcCCCcccCCCHHHHh
Confidence 000 011111 11 567899999999999999999995
No 404
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.95 E-value=5.8e-29 Score=267.20 Aligned_cols=207 Identities=23% Similarity=0.276 Sum_probs=171.5
Q ss_pred cCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCC---cchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCcc
Q 039533 626 SGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHH---GASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDF 702 (949)
Q Consensus 626 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 702 (949)
+-|..++.||-|+||.|.++.-.++...+|+|.+++.+. ......+.|-.||...+.+-||++|-.|.+.+ .
T Consensus 629 SmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQDkd-----n 703 (1034)
T KOG0608|consen 629 SMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQDKD-----N 703 (1034)
T ss_pred cceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEeccCC-----c
Confidence 457778899999999999999988888899999875542 22345778999999999999999997765444 8
Q ss_pred ceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEE
Q 039533 703 KASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARV 782 (949)
Q Consensus 703 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl 782 (949)
.|+||||++||++-.+|- .-+.+.+..++-++.++..|+++.| +.|+|||||||+|||||.+|++||
T Consensus 704 LYFVMdYIPGGDmMSLLI----------rmgIFeE~LARFYIAEltcAiesVH---kmGFIHRDiKPDNILIDrdGHIKL 770 (1034)
T KOG0608|consen 704 LYFVMDYIPGGDMMSLLI----------RMGIFEEDLARFYIAELTCAIESVH---KMGFIHRDIKPDNILIDRDGHIKL 770 (1034)
T ss_pred eEEEEeccCCccHHHHHH----------HhccCHHHHHHHHHHHHHHHHHHHH---hccceecccCccceEEccCCceee
Confidence 999999999999999886 2355788889999999999999999 459999999999999999999999
Q ss_pred eecccceecCC---------CCC-------------------------------ccccccccCccCccCccccCCCccCC
Q 039533 783 GDFGLARILSP---------DHT-------------------------------QTSSFSVKGSLGYIAPEYGVGCEVST 822 (949)
Q Consensus 783 ~DfG~a~~~~~---------~~~-------------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~ 822 (949)
+|||++.-+.. +.. .......+||+.|+|||++....++.
T Consensus 771 TDFGLCTGfRWTHdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q 850 (1034)
T KOG0608|consen 771 TDFGLCTGFRWTHDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQ 850 (1034)
T ss_pred eeccccccceeccccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccc
Confidence 99999864311 000 00001346999999999999999999
Q ss_pred ccchHHHHHHHHHHHhCCCCCccccccC
Q 039533 823 NGDVYSYGILLLELVIGKKPIDIMFEGD 850 (949)
Q Consensus 823 ~sDiwSlGvvl~elltg~~Pf~~~~~~~ 850 (949)
-+|.||.|||||||+.|++||-....++
T Consensus 851 ~cdwws~gvil~em~~g~~pf~~~tp~~ 878 (1034)
T KOG0608|consen 851 LCDWWSVGVILYEMLVGQPPFLADTPGE 878 (1034)
T ss_pred cchhhHhhHHHHHHhhCCCCccCCCCCc
Confidence 9999999999999999999996554443
No 405
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=99.95 E-value=1.3e-28 Score=262.81 Aligned_cols=200 Identities=22% Similarity=0.288 Sum_probs=170.4
Q ss_pred HHhcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCC--------cchHHHHHHHHHHHhcC---CCcceeEEee
Q 039533 623 NATSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHH--------GASRSFIAECKALKSIR---HRNLVKVLTA 691 (949)
Q Consensus 623 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--------~~~~~~~~E~~~l~~l~---h~niv~~~~~ 691 (949)
....+|+..+.+|+|+||.|+.|.++.+...|+||.+.+... ...-..-.|+++|..++ |+||++++++
T Consensus 558 ~k~s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdf 637 (772)
T KOG1152|consen 558 KKFSDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDF 637 (772)
T ss_pred cccccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhhe
Confidence 345679999999999999999999998889999999864421 11123557999999996 9999999999
Q ss_pred eecccccCCccceeEeeec-cCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCC
Q 039533 692 CLGADYRGNDFKASVYEFM-HYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPS 770 (949)
Q Consensus 692 ~~~~~~~~~~~~~lv~e~~-~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~ 770 (949)
|.+.+ ++|++||-. ++.+|.+++. ..+.+++.++..|++||+.|+++||++ +|||||||-+
T Consensus 638 FEddd-----~yyl~te~hg~gIDLFd~IE----------~kp~m~E~eAk~IFkQV~agi~hlh~~---~ivhrdikde 699 (772)
T KOG1152|consen 638 FEDDD-----YYYLETEVHGEGIDLFDFIE----------FKPRMDEPEAKLIFKQVVAGIKHLHDQ---GIVHRDIKDE 699 (772)
T ss_pred eecCC-----eeEEEecCCCCCcchhhhhh----------ccCccchHHHHHHHHHHHhcccccccc---Cceecccccc
Confidence 65544 899999876 6679999996 356789999999999999999999988 9999999999
Q ss_pred CeeecCCCceEEeecccceecCCCCCccccccccCccCccCccccCCCcc-CCccchHHHHHHHHHHHhCCCCCc
Q 039533 771 NVLLDDYMTARVGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEV-STNGDVYSYGILLLELVIGKKPID 844 (949)
Q Consensus 771 NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDiwSlGvvl~elltg~~Pf~ 844 (949)
|+.++.+|-+||+|||.|.....+.. ..++||..|.|||++.|.+| +...|||++|+++|.++...-||.
T Consensus 700 nvivd~~g~~klidfgsaa~~ksgpf----d~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyy 770 (772)
T KOG1152|consen 700 NVIVDSNGFVKLIDFGSAAYTKSGPF----DVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYY 770 (772)
T ss_pred cEEEecCCeEEEeeccchhhhcCCCc----ceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCc
Confidence 99999999999999999976544332 24679999999999999887 577899999999999999988874
No 406
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=99.95 E-value=3.8e-28 Score=243.07 Aligned_cols=200 Identities=23% Similarity=0.279 Sum_probs=168.3
Q ss_pred hcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecC--CCcchHHHHHHHHHHHhcCCCcceeEEeeeecccc-cCCc
Q 039533 625 TSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQ--HHGASRSFIAECKALKSIRHRNLVKVLTACLGADY-RGND 701 (949)
Q Consensus 625 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~-~~~~ 701 (949)
..+|.-.+.+|.|.- .|..|.+.-.++.||+|.+... .....++..+|...+..+.|+||++++.++..... ....
T Consensus 16 ~~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~ 94 (369)
T KOG0665|consen 16 PKRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQ 94 (369)
T ss_pred eeeeeeecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHH
Confidence 356777788999988 8888888888999999998633 23345788899999999999999999998864332 2234
Q ss_pred cceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceE
Q 039533 702 FKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTAR 781 (949)
Q Consensus 702 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~k 781 (949)
..|+|||+|. .+|...++ ..++-.+...|..|++.|++|||+. +|+||||||+||++..+..+|
T Consensus 95 e~y~v~e~m~-~nl~~vi~------------~elDH~tis~i~yq~~~~ik~lhs~---~IihRdLkPsnivv~~~~~lK 158 (369)
T KOG0665|consen 95 EVYLVMELMD-ANLCQVIL------------MELDHETISYILYQMLCGIKHLHSA---GIIHRDLKPSNIVVNSDCTLK 158 (369)
T ss_pred hHHHHHHhhh-hHHHHHHH------------HhcchHHHHHHHHHHHHHHHHHHhc---ceeecccCcccceecchhhee
Confidence 5799999996 58888876 2367788999999999999999977 999999999999999999999
Q ss_pred EeecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCc
Q 039533 782 VGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPID 844 (949)
Q Consensus 782 l~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~ 844 (949)
|.|||+|+.-..+ ......+.|..|+|||++.+..+.+.+||||.||++.||++|+.-|.
T Consensus 159 i~dfg~ar~e~~~---~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~ 218 (369)
T KOG0665|consen 159 ILDFGLARTEDTD---FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFP 218 (369)
T ss_pred eccchhhcccCcc---cccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEec
Confidence 9999999875554 12234668999999999999899999999999999999999999885
No 407
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=99.94 E-value=1.1e-27 Score=233.62 Aligned_cols=255 Identities=18% Similarity=0.238 Sum_probs=189.3
Q ss_pred cCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCCcchHHHHHHHHHHHhc-CCCcceeEEeeeecccccCCccce
Q 039533 626 SGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHGASRSFIAECKALKSI-RHRNLVKVLTACLGADYRGNDFKA 704 (949)
Q Consensus 626 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~~ 704 (949)
+.|.+.+.+|+|.||.+-+++++.+++.+|+|.+.... ...++|.+|...--.+ .|.||+.-|+.. ++..+.++
T Consensus 24 d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~-tt~~dF~rEfhY~~~Ls~H~hIi~tY~va----Fqt~d~Yv 98 (378)
T KOG1345|consen 24 DVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQ-TTQADFVREFHYSFFLSPHQHIIDTYEVA----FQTSDAYV 98 (378)
T ss_pred hhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcch-hhHHHHHHHhccceeeccchhhhHHHHHH----hhcCceEE
Confidence 45888999999999999999999999999999986433 3457899998765555 589999887654 44455889
Q ss_pred eEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeec--CCCceEE
Q 039533 705 SVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLD--DYMTARV 782 (949)
Q Consensus 705 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~--~~~~~kl 782 (949)
+++||++.|+|.+-+. ...+.+....+++.|++.|+.|||++ ++||||||.+||||- +..++|+
T Consensus 99 F~qE~aP~gdL~snv~-----------~~GigE~~~K~v~~ql~SAi~fMHsk---nlVHRdlK~eNiLif~~df~rvKl 164 (378)
T KOG1345|consen 99 FVQEFAPRGDLRSNVE-----------AAGIGEANTKKVFAQLLSAIEFMHSK---NLVHRDLKAENILIFDADFYRVKL 164 (378)
T ss_pred EeeccCccchhhhhcC-----------cccccHHHHHHHHHHHHHHHHHhhcc---chhhcccccceEEEecCCccEEEe
Confidence 9999999999998875 24477788899999999999999987 999999999999993 4458999
Q ss_pred eecccceecCCCCCccccccccCccCccCccccCC---C--ccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhc
Q 039533 783 GDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVG---C--EVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFG 857 (949)
Q Consensus 783 ~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~--~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~ 857 (949)
||||.++..+.... ...-+..|.|||.... + ...+.+|||.||+++|.++||..||+.....+..+.+|.
T Consensus 165 cDFG~t~k~g~tV~-----~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~~Y~~~~ 239 (378)
T KOG1345|consen 165 CDFGLTRKVGTTVK-----YLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDKPYWEWE 239 (378)
T ss_pred eecccccccCceeh-----hhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhccCchHHHHH
Confidence 99999876543322 1235678999997442 2 457889999999999999999999986555555554443
Q ss_pred cccCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHH
Q 039533 858 RKALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHELQ 929 (949)
Q Consensus 858 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~ 929 (949)
...- .....-| .......+.+.++.++-+.++|++|--..++.+...
T Consensus 240 ~w~~---------rk~~~~P----------------~~F~~fs~~a~r~Fkk~lt~~~~drcki~~~kk~rk 286 (378)
T KOG1345|consen 240 QWLK---------RKNPALP----------------KKFNPFSEKALRLFKKSLTPRFKDRCKIWTAKKMRK 286 (378)
T ss_pred HHhc---------ccCccCc----------------hhhcccCHHHHHHHHHhcCCcccccchhHHHHHHHH
Confidence 2110 0000000 001122345677888889999999955555554443
No 408
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=99.94 E-value=4.2e-29 Score=255.85 Aligned_cols=300 Identities=23% Similarity=0.266 Sum_probs=185.9
Q ss_pred EEcCCCCCCccccCCCCCCCCCceeeccCceeccccCCcccCcccCcEEeeccccccCcCCCCCCCCccceeecCCC-cc
Q 039533 70 LDLRSLKLAGSVSHFIGNLSFLKQLYLQVNSFTHEIPSEIGGLRRLKVLALNNNSICGEIPTNISRCSTLIPIHPQN-NQ 148 (949)
Q Consensus 70 l~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~-n~ 148 (949)
+|-++.+|+ .+|..+. ..-..++|..|+|+...|.+|+.+++||.||||+|+|+..-|+.|.++.+|..|-+-+ |+
T Consensus 51 VdCr~~GL~-eVP~~LP--~~tveirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~Nk 127 (498)
T KOG4237|consen 51 VDCRGKGLT-EVPANLP--PETVEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNNK 127 (498)
T ss_pred EEccCCCcc-cCcccCC--CcceEEEeccCCcccCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhcCCc
Confidence 344455555 4554333 3456788889999866677899999999999999999888888898888887765544 88
Q ss_pred ccccccccccCCCCCcEEECCCCCCCCCCCCCcCCCCCccEEeccccccCCCCCCcccCCCccccccccCcccccc----
Q 039533 149 LVGKILSRFSSLSKTEILNLGSNHLTGSIPSSLGNLSSIHTISLAYNNLDGTIPNSFGWFENLVFLSLAANNLSVV---- 224 (949)
Q Consensus 149 l~~~~~~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~---- 224 (949)
|+....+.|.+|..|+.|.+.-|++.-.....|..+++|..|.|..|.+..+--..|..+.+++++.+..|.+-..
T Consensus 128 I~~l~k~~F~gL~slqrLllNan~i~Cir~~al~dL~~l~lLslyDn~~q~i~~~tf~~l~~i~tlhlA~np~icdCnL~ 207 (498)
T KOG4237|consen 128 ITDLPKGAFGGLSSLQRLLLNANHINCIRQDALRDLPSLSLLSLYDNKIQSICKGTFQGLAAIKTLHLAQNPFICDCNLP 207 (498)
T ss_pred hhhhhhhHhhhHHHHHHHhcChhhhcchhHHHHHHhhhcchhcccchhhhhhccccccchhccchHhhhcCccccccccc
Confidence 9888888899999999999999999877778888899999999999988833334888888999998888873211
Q ss_pred --cccccCCCCChhhhccccccccccCCCCCCCCCCcchhccccccCcccEEEccCCCCCccCCc-hhhcccccccEEEc
Q 039533 225 --ENKLTGEVPSLEKLQRLQHFTITSNSLGSGGNDDLSFLCSLTNATRLTWMHINSNNFGGLLPG-CISNLSKTIKTLFL 301 (949)
Q Consensus 225 --~~~l~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~~~~L~~L~L~~N~l~~~~p~-~~~~l~~~L~~L~L 301 (949)
...+....-.++..+-..-..+.++++...... .|.+.+ ..+..-..+.....+..|. +|..+ ++|+.|+|
T Consensus 208 wla~~~a~~~ietsgarc~~p~rl~~~Ri~q~~a~--kf~c~~---esl~s~~~~~d~~d~~cP~~cf~~L-~~L~~lnl 281 (498)
T KOG4237|consen 208 WLADDLAMNPIETSGARCVSPYRLYYKRINQEDAR--KFLCSL---ESLPSRLSSEDFPDSICPAKCFKKL-PNLRKLNL 281 (498)
T ss_pred hhhhHHhhchhhcccceecchHHHHHHHhcccchh--hhhhhH---HhHHHhhccccCcCCcChHHHHhhc-ccceEecc
Confidence 000000011122233333334444444332211 112221 1111111222333333333 34444 34666666
Q ss_pred cCccccCCCCCCCCCCCcccEEEeecceecccCCCcccccCCCCEEecCCcccccccCcccccccccceeecccccc
Q 039533 302 NNNKIYGSIPAGIGNFVNLQRLDMWNNQLSGTIPPAIGELQNLKILGLNRNKLSGNIPPSIGNLKMLLNLFLNDNFL 378 (949)
Q Consensus 302 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l 378 (949)
++|+|+++-+.+|..+..+++|.|..|+|...-...|.++..|+.|+|++|+|+...|.+|..+.+|.+|+|-.|.+
T Consensus 282 snN~i~~i~~~aFe~~a~l~eL~L~~N~l~~v~~~~f~~ls~L~tL~L~~N~it~~~~~aF~~~~~l~~l~l~~Np~ 358 (498)
T KOG4237|consen 282 SNNKITRIEDGAFEGAAELQELYLTRNKLEFVSSGMFQGLSGLKTLSLYDNQITTVAPGAFQTLFSLSTLNLLSNPF 358 (498)
T ss_pred CCCccchhhhhhhcchhhhhhhhcCcchHHHHHHHhhhccccceeeeecCCeeEEEecccccccceeeeeehccCcc
Confidence 66666655566666666666666666666544445555666666666666666655556666666666666555543
No 409
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=99.94 E-value=3.7e-28 Score=263.84 Aligned_cols=254 Identities=22% Similarity=0.274 Sum_probs=201.1
Q ss_pred hcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCCcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCccce
Q 039533 625 TSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFKA 704 (949)
Q Consensus 625 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 704 (949)
.++|...+++|.|.||.||+|++..+++..|+|+++..........++|+-+++..+||||+.++|-+.. .+..+
T Consensus 14 ~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~h~nivay~gsylr-----~dklw 88 (829)
T KOG0576|consen 14 QDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRHPNIVAYFGSYLR-----RDKLW 88 (829)
T ss_pred ccchhheeeecCCcccchhhhcccccCchhhheeeeccCCccccccccceeeeecCCCcChHHHHhhhhh-----hcCcE
Confidence 3578889999999999999999999999999999998877777888899999999999999999988543 44899
Q ss_pred eEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEee
Q 039533 705 SVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVGD 784 (949)
Q Consensus 705 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~D 784 (949)
+.|||+.+|+|++..+ ....+++.+....++...+|++|||+. +=+|||||-.||++++.|.+|++|
T Consensus 89 icMEycgggslQdiy~----------~TgplselqiayvcRetl~gl~ylhs~---gk~hRdiKGanilltd~gDvklaD 155 (829)
T KOG0576|consen 89 ICMEYCGGGSLQDIYH----------VTGPLSELQIAYVCRETLQGLKYLHSQ---GKIHRDIKGANILLTDEGDVKLAD 155 (829)
T ss_pred EEEEecCCCcccceee----------ecccchhHHHHHHHhhhhccchhhhcC---CcccccccccceeecccCceeecc
Confidence 9999999999999887 456789999999999999999999977 889999999999999999999999
Q ss_pred cccceecCCCCCccccccccCccCccCccccC---CCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhccccC
Q 039533 785 FGLARILSPDHTQTSSFSVKGSLGYIAPEYGV---GCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKAL 861 (949)
Q Consensus 785 fG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~ 861 (949)
||.+-.+...... ...+.||+.|||||+.. .+.|..++|||+.|+...|+---++|..........+. +.
T Consensus 156 fgvsaqitati~K--rksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhpmr~l~L--mT--- 228 (829)
T KOG0576|consen 156 FGVSAQITATIAK--RKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHPMRALFL--MT--- 228 (829)
T ss_pred cCchhhhhhhhhh--hhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccchHHHHHH--hh---
Confidence 9998766543322 23567999999999854 45689999999999999999888887432211110000 00
Q ss_pred CCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 039533 862 PDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVH 926 (949)
Q Consensus 862 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 926 (949)
...+++.-..++. ...+.+-++++.|+..+|++||+++..++
T Consensus 229 ----kS~~qpp~lkDk~-------------------kws~~fh~fvK~altknpKkRptaeklL~ 270 (829)
T KOG0576|consen 229 ----KSGFQPPTLKDKT-------------------KWSEFFHNFVKGALTKNPKKRPTAEKLLQ 270 (829)
T ss_pred ----ccCCCCCcccCCc-------------------cchHHHHHHHHHHhcCCCccCCChhhhee
Confidence 0011111111111 22345788999999999999999987754
No 410
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=99.94 E-value=2.4e-27 Score=246.75 Aligned_cols=282 Identities=23% Similarity=0.280 Sum_probs=199.5
Q ss_pred HHHHhcCCCCCCeeeeecCceEEEEEEcC---CCEEEEEEEEecCCCcchHHHHHHHHHHHhc-CCCcceeEEeeeeccc
Q 039533 621 LYNATSGFSSANLVGVGSFGSVYKGIIDE---GRTTIAVKVFNLQHHGASRSFIAECKALKSI-RHRNLVKVLTACLGAD 696 (949)
Q Consensus 621 l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~---~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~ 696 (949)
+....+.|..+++||+|.|++||+|.+.. ..+.||+|.+.... ...+..+|++.|..+ .+.||+++.+++
T Consensus 31 ~p~~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts--~p~ri~~El~~L~~~gG~~ni~~~~~~~---- 104 (418)
T KOG1167|consen 31 IPFISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTS--SPSRILNELEMLYRLGGSDNIIKLNGCF---- 104 (418)
T ss_pred hhhhhhhhhhhccccccchhhhhhhhHhhhccccceEeeeeccccc--CchHHHHHHHHHHHhccchhhhcchhhh----
Confidence 33445678999999999999999999876 67899999986443 346789999999999 589999999885
Q ss_pred ccCCccceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeec-
Q 039533 697 YRGNDFKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLD- 775 (949)
Q Consensus 697 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~- 775 (949)
+.++...+|+||++.....++.. .++..++..+++.+..||+++|++ |||||||||+|++.+
T Consensus 105 -rnnd~v~ivlp~~~H~~f~~l~~-------------~l~~~~i~~Yl~~ll~Al~~~h~~---GIvHRDiKpsNFL~n~ 167 (418)
T KOG1167|consen 105 -RNNDQVAIVLPYFEHDRFRDLYR-------------SLSLAEIRWYLRNLLKALAHLHKN---GIVHRDIKPSNFLYNR 167 (418)
T ss_pred -ccCCeeEEEecccCccCHHHHHh-------------cCCHHHHHHHHHHHHHHhhhhhcc---CccccCCCcccccccc
Confidence 44558999999999999988875 367889999999999999999977 999999999999997
Q ss_pred CCCceEEeecccceecCCCC------------------------------------------CccccccccCccCccCcc
Q 039533 776 DYMTARVGDFGLARILSPDH------------------------------------------TQTSSFSVKGSLGYIAPE 813 (949)
Q Consensus 776 ~~~~~kl~DfG~a~~~~~~~------------------------------------------~~~~~~~~~gt~~y~aPE 813 (949)
..+.-.|+|||+|..+.... .........||++|+|||
T Consensus 168 ~t~rg~LvDFgLA~~~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPE 247 (418)
T KOG1167|consen 168 RTQRGVLVDFGLAQRYDGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPE 247 (418)
T ss_pred ccCCceEEechhHHHHHhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchH
Confidence 56788999999998321000 000112356999999999
Q ss_pred ccCCC-ccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhccccCCCc---hhhhccc------CCCCCchh----
Q 039533 814 YGVGC-EVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKALPDD---VMDIVDS------SLLPDDED---- 879 (949)
Q Consensus 814 ~~~~~-~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~---~~~~~d~------~l~~~~~~---- 879 (949)
++... ..++++||||.||++.-+++++.||-....+-..+.+.+...-+.. .....+. .-.+...+
T Consensus 248 vL~k~~~QttaiDiws~GVI~Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~ 327 (418)
T KOG1167|consen 248 VLFRCPRQTTAIDIWSAGVILLSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPELRVN 327 (418)
T ss_pred HHhhccCcCCccceeeccceeehhhccccccccCccccchHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHHHhc
Confidence 98765 4789999999999999999999999654443333322211100000 0000000 00000000
Q ss_pred ---h-hhhhchhhhh--hhhhhHH-HHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 039533 880 ---L-ILTGNQRQKQ--ARINSII-ECLISMVRIGVACSMELPQDRTNMTNVVH 926 (949)
Q Consensus 880 ---~-~~~~~~~~~~--~~~~~~~-~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 926 (949)
. +..... ... ....... ..+..+.+++.+|+..||.+|.|++|.++
T Consensus 328 f~s~~~~~~~~-~~q~n~~~~~~~d~~~~~~~dlLdk~le~np~kRitAEeALk 380 (418)
T KOG1167|consen 328 FETLHIESIYK-SRQPNTEREIGSDVFPALLLDLLDKCLELNPQKRITAEDALK 380 (418)
T ss_pred hhccChhhccc-ccccceeeccccccccHHHHHHHHHHccCChhhcccHHHHhc
Confidence 0 000000 000 0111112 23447899999999999999999999874
No 411
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.94 E-value=5.7e-26 Score=234.04 Aligned_cols=211 Identities=28% Similarity=0.452 Sum_probs=180.6
Q ss_pred eeeecCceEEEEEEcCCCEEEEEEEEecCCCc-chHHHHHHHHHHHhcCCCcceeEEeeeecccccCCccceeEeeeccC
Q 039533 634 VGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHG-ASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFKASVYEFMHY 712 (949)
Q Consensus 634 lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~ 712 (949)
||+|++|.||++....+++.+++|++...... ..+.+.+|++.++.++|++++++++++... ...+++|||+++
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~-----~~~~~~~e~~~~ 75 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDE-----NHLYLVMEYCEG 75 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeeecC-----CeEEEEEecCCC
Confidence 68999999999999877899999999755432 346799999999999999999999997654 378999999999
Q ss_pred CChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecC-CCceEEeecccceec
Q 039533 713 GSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDD-YMTARVGDFGLARIL 791 (949)
Q Consensus 713 gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~-~~~~kl~DfG~a~~~ 791 (949)
++|.+++... ...+++..+..++.+++++++|||+. +++|+||+|.||+++. ++.++|+|||.+...
T Consensus 76 ~~l~~~~~~~---------~~~~~~~~~~~~~~~l~~~l~~lh~~---~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~ 143 (215)
T cd00180 76 GSLKDLLKEN---------EGKLSEDEILRILLQILEGLEYLHSN---GIIHRDLKPENILLDSDNGKVKLADFGLSKLL 143 (215)
T ss_pred CcHHHHHHhc---------cCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHhhEEEeCCCCcEEEecCCceEEc
Confidence 9999998621 13588999999999999999999977 9999999999999999 899999999999876
Q ss_pred CCCCCccccccccCccCccCccccCCC-ccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhccccCCCchhhhcc
Q 039533 792 SPDHTQTSSFSVKGSLGYIAPEYGVGC-EVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKALPDDVMDIVD 870 (949)
Q Consensus 792 ~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~d 870 (949)
..... ......+...|++||..... ..+.++|+|++|++++++
T Consensus 144 ~~~~~--~~~~~~~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l---------------------------------- 187 (215)
T cd00180 144 TSDKS--LLKTIVGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL---------------------------------- 187 (215)
T ss_pred cCCcc--hhhcccCCCCccChhHhcccCCCCchhhhHHHHHHHHHH----------------------------------
Confidence 55431 11134478899999998877 788999999999999999
Q ss_pred cCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHH
Q 039533 871 SSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHE 927 (949)
Q Consensus 871 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 927 (949)
..+.+++..|++.+|++||++.++++.
T Consensus 188 ------------------------------~~~~~~l~~~l~~~p~~R~~~~~l~~~ 214 (215)
T cd00180 188 ------------------------------PELKDLIRKMLQKDPEKRPSAKEILEH 214 (215)
T ss_pred ------------------------------HHHHHHHHHHhhCCcccCcCHHHHhhC
Confidence 236788999999999999999999864
No 412
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=99.93 E-value=3.8e-27 Score=248.46 Aligned_cols=202 Identities=22% Similarity=0.263 Sum_probs=167.1
Q ss_pred HhcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCCcchHHHHHHHHHHHhcC------CCcceeEEeeeecccc
Q 039533 624 ATSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHGASRSFIAECKALKSIR------HRNLVKVLTACLGADY 697 (949)
Q Consensus 624 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~------h~niv~~~~~~~~~~~ 697 (949)
--++|.+....|+|-|++|.+|.+..-+..||||+++.... -.+.=+.|+++|+++. --|+++++-.|.
T Consensus 430 LD~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~-M~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F~---- 504 (752)
T KOG0670|consen 430 LDSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNEV-MHKTGLKELEILKKLNDADPEDKFHCLRLFRHFK---- 504 (752)
T ss_pred hcceeEEEeccccceeeeeeeccccCCCCeeEEEEeecchH-HhhhhhHHHHHHHHhhccCchhhhHHHHHHHHhh----
Confidence 34679999999999999999999988889999999974432 2244568999999994 347888877644
Q ss_pred cCCccceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCC
Q 039533 698 RGNDFKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDY 777 (949)
Q Consensus 698 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~ 777 (949)
..++.|+|+|-+. .+|.+.++.+. ..-.+....+..++.|+.-||..|... +|+|.||||+||||++.
T Consensus 505 -hknHLClVFE~Ls-lNLRevLKKyG-------~nvGL~ikaVRsYaqQLflALklLK~c---~vlHaDIKPDNiLVNE~ 572 (752)
T KOG0670|consen 505 -HKNHLCLVFEPLS-LNLREVLKKYG-------RNVGLHIKAVRSYAQQLFLALKLLKKC---GVLHADIKPDNILVNES 572 (752)
T ss_pred -hcceeEEEehhhh-chHHHHHHHhC-------cccceeehHHHHHHHHHHHHHHHHHhc---CeeecccCccceEeccC
Confidence 4459999999985 59999998542 234578889999999999999999966 99999999999999865
Q ss_pred -CceEEeecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccc
Q 039533 778 -MTARVGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIM 846 (949)
Q Consensus 778 -~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~ 846 (949)
..+||||||.|...+.....+ ..-+..|.|||++.|..|+...|+||.||+|||+.||+..|...
T Consensus 573 k~iLKLCDfGSA~~~~eneitP----YLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~ 638 (752)
T KOG0670|consen 573 KNILKLCDFGSASFASENEITP----YLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGR 638 (752)
T ss_pred cceeeeccCccccccccccccH----HHHHHhccCcceeecCcccCCccceeeceeeEEeeccceecCCC
Confidence 468999999998877655432 22466899999999999999999999999999999999988643
No 413
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.93 E-value=1.6e-25 Score=233.58 Aligned_cols=200 Identities=31% Similarity=0.409 Sum_probs=170.7
Q ss_pred CCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCCc-chHHHHHHHHHHHhcCCCcceeEEeeeecccccCCccceeE
Q 039533 628 FSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHG-ASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFKASV 706 (949)
Q Consensus 628 y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv 706 (949)
|++.+.||.|++|.||+|....+++.+|+|.+...... ..+.+.+|++.+++++|+|++++++++.... ..+++
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~-----~~~~v 75 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFEDPE-----PLYLV 75 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeeecCC-----ceEEE
Confidence 56778999999999999999877899999999865544 5678999999999999999999999876543 78999
Q ss_pred eeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEeecc
Q 039533 707 YEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVGDFG 786 (949)
Q Consensus 707 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~DfG 786 (949)
+||+++++|.+++... ...+++..+..++.+++.++.|||+. +++|+|++|+||+++.++.++|+|||
T Consensus 76 ~e~~~~~~L~~~~~~~---------~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~di~~~ni~v~~~~~~~l~d~g 143 (225)
T smart00221 76 MEYCEGGDLFDYLRKK---------GGKLSEEEARFYLRQILEALEYLHSL---GIVHRDLKPENILLGMDGLVKLADFG 143 (225)
T ss_pred EeccCCCCHHHHHHhc---------ccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeeCc
Confidence 9999999999998621 11178899999999999999999977 99999999999999999999999999
Q ss_pred cceecCCCCCccccccccCccCccCcccc-CCCccCCccchHHHHHHHHHHHhCCCCCcc
Q 039533 787 LARILSPDHTQTSSFSVKGSLGYIAPEYG-VGCEVSTNGDVYSYGILLLELVIGKKPIDI 845 (949)
Q Consensus 787 ~a~~~~~~~~~~~~~~~~gt~~y~aPE~~-~~~~~~~~sDiwSlGvvl~elltg~~Pf~~ 845 (949)
.+......... ......++..|++||.. ....++.++|||+||++++||++|+.||+.
T Consensus 144 ~~~~~~~~~~~-~~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~ 202 (225)
T smart00221 144 LARFIHRDLAA-LLKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSG 202 (225)
T ss_pred eeeEecCcccc-cccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccc
Confidence 99877554311 11134578899999998 666788899999999999999999999954
No 414
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=99.91 E-value=9.4e-27 Score=238.67 Aligned_cols=412 Identities=19% Similarity=0.200 Sum_probs=297.2
Q ss_pred eEEeCCC---------CcEEEEEcCCCCCCccccCCCCCCCCCceeeccCceeccccCCcccCcccCcEEeecc-ccccC
Q 039533 58 VTCSRRH---------QRVTLLDLRSLKLAGSVSHFIGNLSFLKQLYLQVNSFTHEIPSEIGGLRRLKVLALNN-NSICG 127 (949)
Q Consensus 58 v~C~~~~---------~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~-N~l~~ 127 (949)
|.|+..+ ...+.++|..|+|+...+.+|..++.|+.||||+|+|+-+-|++|.++.+|..|-+-+ |+|+.
T Consensus 51 VdCr~~GL~eVP~~LP~~tveirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~NkI~~ 130 (498)
T KOG4237|consen 51 VDCRGKGLTEVPANLPPETVEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNNKITD 130 (498)
T ss_pred EEccCCCcccCcccCCCcceEEEeccCCcccCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhcCCchhh
Confidence 7887643 3578999999999988888999999999999999999999999999999988777666 99995
Q ss_pred cCCCCCCCCccceeecCCCccccccccccccCCCCCcEEECCCCCCCCCCCC-CcCCCCCccEEecccccc---------
Q 039533 128 EIPTNISRCSTLIPIHPQNNQLVGKILSRFSSLSKTEILNLGSNHLTGSIPS-SLGNLSSIHTISLAYNNL--------- 197 (949)
Q Consensus 128 ~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~L~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~L~~N~l--------- 197 (949)
.--..|++|+.|+.|.+.-|++.-+..+.|..|++|..|.|-+|.+. .++. +|..+..++.+.+..|.+
T Consensus 131 l~k~~F~gL~slqrLllNan~i~Cir~~al~dL~~l~lLslyDn~~q-~i~~~tf~~l~~i~tlhlA~np~icdCnL~wl 209 (498)
T KOG4237|consen 131 LPKGAFGGLSSLQRLLLNANHINCIRQDALRDLPSLSLLSLYDNKIQ-SICKGTFQGLAAIKTLHLAQNPFICDCNLPWL 209 (498)
T ss_pred hhhhHhhhHHHHHHHhcChhhhcchhHHHHHHhhhcchhcccchhhh-hhccccccchhccchHhhhcCccccccccchh
Confidence 44457999999999999999999999999999999999999999999 5554 899999999999999983
Q ss_pred ---CCCCCCcccCCCccccccccCcccccccccccCCCCChhhhccccccccccCCCCCCCCCCcchhccccccCcccEE
Q 039533 198 ---DGTIPNSFGWFENLVFLSLAANNLSVVENKLTGEVPSLEKLQRLQHFTITSNSLGSGGNDDLSFLCSLTNATRLTWM 274 (949)
Q Consensus 198 ---~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~l~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~~~~L~~L 274 (949)
....|..++++.-..-..|.++++..++..-+.. .+.++..--.+...... ..-...|..+++|+.|
T Consensus 210 a~~~a~~~ietsgarc~~p~rl~~~Ri~q~~a~kf~c-----~~esl~s~~~~~d~~d~-----~cP~~cf~~L~~L~~l 279 (498)
T KOG4237|consen 210 ADDLAMNPIETSGARCVSPYRLYYKRINQEDARKFLC-----SLESLPSRLSSEDFPDS-----ICPAKCFKKLPNLRKL 279 (498)
T ss_pred hhHHhhchhhcccceecchHHHHHHHhcccchhhhhh-----hHHhHHHhhccccCcCC-----cChHHHHhhcccceEe
Confidence 2344555666666666666666655443221111 11111111111111211 1223348899999999
Q ss_pred EccCCCCCccCCchhhcccccccEEEccCccccCCCCCCCCCCCcccEEEeecceecccCCCcccccCCCCEEecCCccc
Q 039533 275 HINSNNFGGLLPGCISNLSKTIKTLFLNNNKIYGSIPAGIGNFVNLQRLDMWNNQLSGTIPPAIGELQNLKILGLNRNKL 354 (949)
Q Consensus 275 ~L~~N~l~~~~p~~~~~l~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 354 (949)
+|++|+++.+-+++|..+. .++.|+|..|+|...-...|.++..|+.|+|.+|+|+...|.+|..+..|.+|+|-.|.+
T Consensus 280 nlsnN~i~~i~~~aFe~~a-~l~eL~L~~N~l~~v~~~~f~~ls~L~tL~L~~N~it~~~~~aF~~~~~l~~l~l~~Np~ 358 (498)
T KOG4237|consen 280 NLSNNKITRIEDGAFEGAA-ELQELYLTRNKLEFVSSGMFQGLSGLKTLSLYDNQITTVAPGAFQTLFSLSTLNLLSNPF 358 (498)
T ss_pred ccCCCccchhhhhhhcchh-hhhhhhcCcchHHHHHHHhhhccccceeeeecCCeeEEEecccccccceeeeeehccCcc
Confidence 9999999999999999885 599999999999977788899999999999999999999999999999999999999887
Q ss_pred cccc-CcccccccccceeecccccccccCCCCCCCCCCCcEEEeeCcccc---CCCCCccc---------CCcccceeec
Q 039533 355 SGNI-PPSIGNLKMLLNLFLNDNFLEVSIPSSLGQCESLIEINLSNNNLS---GTIPPQFF---------SLSSLSISLD 421 (949)
Q Consensus 355 ~~~~-p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~---~~~p~~~~---------~l~~l~~~L~ 421 (949)
.-.- -.+++. +|..+.-.|..|- +.-..++.+.++.+.+. -.-|+..+ .++-+-+...
T Consensus 359 ~CnC~l~wl~~-------Wlr~~~~~~~~~C--q~p~~~~~~~~~dv~~~~~~c~~~ee~~~~~s~~cP~~c~c~~tVvR 429 (498)
T KOG4237|consen 359 NCNCRLAWLGE-------WLRKKSVVGNPRC--QSPGFVRQIPISDVAFGDFRCGGPEELGCLTSSPCPPPCTCLDTVVR 429 (498)
T ss_pred cCccchHHHHH-------HHhhCCCCCCCCC--CCCchhccccchhccccccccCCccccCCCCCCCCCCCcchhhhhHh
Confidence 5210 011111 1222221211111 11123444444444332 11122111 1222323344
Q ss_pred cCCCccCCCCccccccccccceeeeccccccccCCcccccccchhhcccCccccccccCCCcCCCCCCCEEECCCC
Q 039533 422 WSRNKLTGSLPIEVGKLKILEFLYVYENRLEGEIPSTFGNCIRLEQLGMGGNLFQGPISSSLGSLRGLRVLDLSQN 497 (949)
Q Consensus 422 ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N 497 (949)
-|++.++ .+|..+ ...-+.|++.+|.++ .+|.+ .+.+| .+|+++|+++..--..|.++++|.+|-||+|
T Consensus 430 cSnk~lk-~lp~~i--P~d~telyl~gn~~~-~vp~~--~~~~l-~~dls~n~i~~Lsn~tf~n~tql~tlilsyn 498 (498)
T KOG4237|consen 430 CSNKLLK-LLPRGI--PVDVTELYLDGNAIT-SVPDE--LLRSL-LLDLSNNRISSLSNYTFSNMTQLSTLILSYN 498 (498)
T ss_pred hcccchh-hcCCCC--CchhHHHhcccchhc-ccCHH--HHhhh-hcccccCceehhhcccccchhhhheeEEecC
Confidence 5555555 444332 234567889999998 77877 67788 8999999998888888999999999999887
No 415
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.91 E-value=1e-23 Score=267.06 Aligned_cols=337 Identities=21% Similarity=0.267 Sum_probs=208.5
Q ss_pred CCCCCCCCCceeeccCce------eccccCCcccCcc-cCcEEeeccccccCcCCCCCCCCccceeecCCCccccccccc
Q 039533 83 HFIGNLSFLKQLYLQVNS------FTHEIPSEIGGLR-RLKVLALNNNSICGEIPTNISRCSTLIPIHPQNNQLVGKILS 155 (949)
Q Consensus 83 ~~l~~l~~L~~L~L~~n~------l~~~~p~~~~~l~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~ 155 (949)
.+|..+++|+.|.+..+. +...+|..|..++ +|+.|++.+|.+. .+|..| ...+|+.|++++|++.. .+.
T Consensus 552 ~aF~~m~~L~~L~~~~~~~~~~~~~~~~lp~~~~~lp~~Lr~L~~~~~~l~-~lP~~f-~~~~L~~L~L~~s~l~~-L~~ 628 (1153)
T PLN03210 552 NAFKGMRNLLFLKFYTKKWDQKKEVRWHLPEGFDYLPPKLRLLRWDKYPLR-CMPSNF-RPENLVKLQMQGSKLEK-LWD 628 (1153)
T ss_pred HHHhcCccccEEEEecccccccccceeecCcchhhcCcccEEEEecCCCCC-CCCCcC-CccCCcEEECcCccccc-ccc
Confidence 467889999999886653 3446788787764 6999999999887 788877 57889999999988874 455
Q ss_pred cccCCCCCcEEECCCCCCCCCCCCCcCCCCCccEEeccccccCCCCCCcccCCCccccccccCcc-cccccccccCCCCC
Q 039533 156 RFSSLSKTEILNLGSNHLTGSIPSSLGNLSSIHTISLAYNNLDGTIPNSFGWFENLVFLSLAANN-LSVVENKLTGEVPS 234 (949)
Q Consensus 156 ~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~-l~~~~~~l~~~~~~ 234 (949)
.+..+++|+.|+|++|...+.+| .++.+++|++|+|++|.....+|..++++++|+.|++++|. ++. +|.
T Consensus 629 ~~~~l~~Lk~L~Ls~~~~l~~ip-~ls~l~~Le~L~L~~c~~L~~lp~si~~L~~L~~L~L~~c~~L~~--------Lp~ 699 (1153)
T PLN03210 629 GVHSLTGLRNIDLRGSKNLKEIP-DLSMATNLETLKLSDCSSLVELPSSIQYLNKLEDLDMSRCENLEI--------LPT 699 (1153)
T ss_pred ccccCCCCCEEECCCCCCcCcCC-ccccCCcccEEEecCCCCccccchhhhccCCCCEEeCCCCCCcCc--------cCC
Confidence 67888889999998876555666 47788889999998887666888888888888888888753 322 222
Q ss_pred hhhhccccccccccCCCCCCCCCCcchhccccccCcccEEEccCCCCCccCCchhhcccccccEEEccCccccCCCCCCC
Q 039533 235 LEKLQRLQHFTITSNSLGSGGNDDLSFLCSLTNATRLTWMHINSNNFGGLLPGCISNLSKTIKTLFLNNNKIYGSIPAGI 314 (949)
Q Consensus 235 l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~~~~L~~L~L~~N~l~~~~p~~~~~l~~~L~~L~L~~N~l~~~~~~~~ 314 (949)
-.+ +++|+.|++++|.....+|. .+.+|++|+|++|.+. .+|..+
T Consensus 700 ~i~------------------------------l~sL~~L~Lsgc~~L~~~p~----~~~nL~~L~L~~n~i~-~lP~~~ 744 (1153)
T PLN03210 700 GIN------------------------------LKSLYRLNLSGCSRLKSFPD----ISTNISWLDLDETAIE-EFPSNL 744 (1153)
T ss_pred cCC------------------------------CCCCCEEeCCCCCCcccccc----ccCCcCeeecCCCccc-cccccc
Confidence 112 34455555555543333332 1235667777777765 455444
Q ss_pred CCCCcccEEEeecceec-------ccCCCcccccCCCCEEecCCcccccccCcccccccccceeecccccccccCCCCCC
Q 039533 315 GNFVNLQRLDMWNNQLS-------GTIPPAIGELQNLKILGLNRNKLSGNIPPSIGNLKMLLNLFLNDNFLEVSIPSSLG 387 (949)
Q Consensus 315 ~~l~~L~~L~L~~N~l~-------~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~ 387 (949)
.+++|++|++.++... ...+..+...++|+.|+|++|...+.+|.+++++++|+.|++++|...+.+|..+
T Consensus 745 -~l~~L~~L~l~~~~~~~l~~~~~~l~~~~~~~~~sL~~L~Ls~n~~l~~lP~si~~L~~L~~L~Ls~C~~L~~LP~~~- 822 (1153)
T PLN03210 745 -RLENLDELILCEMKSEKLWERVQPLTPLMTMLSPSLTRLFLSDIPSLVELPSSIQNLHKLEHLEIENCINLETLPTGI- 822 (1153)
T ss_pred -cccccccccccccchhhccccccccchhhhhccccchheeCCCCCCccccChhhhCCCCCCEEECCCCCCcCeeCCCC-
Confidence 4566666666653321 1111112223456666666665555556556666666666665554333445443
Q ss_pred CCCCCcEEEeeCccccCCCCCcccCCcccceeeccCCCccCCCCccccccccccceeeeccccccccCCcccccccchhh
Q 039533 388 QCESLIEINLSNNNLSGTIPPQFFSLSSLSISLDWSRNKLTGSLPIEVGKLKILEFLYVYENRLEGEIPSTFGNCIRLEQ 467 (949)
Q Consensus 388 ~l~~L~~L~l~~N~l~~~~p~~~~~l~~l~~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 467 (949)
++++|+.|++++|..-..+|.. ..+|+.|+|++|.++ .+|.++..+++|+.
T Consensus 823 ~L~sL~~L~Ls~c~~L~~~p~~----------------------------~~nL~~L~Ls~n~i~-~iP~si~~l~~L~~ 873 (1153)
T PLN03210 823 NLESLESLDLSGCSRLRTFPDI----------------------------STNISDLNLSRTGIE-EVPWWIEKFSNLSF 873 (1153)
T ss_pred CccccCEEECCCCCcccccccc----------------------------ccccCEeECCCCCCc-cChHHHhcCCCCCE
Confidence 4555555555554433233321 234555556666555 45555666666666
Q ss_pred cccCc-cccccccCCCcCCCCCCCEEECCCCc
Q 039533 468 LGMGG-NLFQGPISSSLGSLRGLRVLDLSQNN 498 (949)
Q Consensus 468 L~l~~-N~l~~~~~~~~~~l~~L~~L~Ls~N~ 498 (949)
|+|++ |++. .+|..+..+++|+.|+++++.
T Consensus 874 L~L~~C~~L~-~l~~~~~~L~~L~~L~l~~C~ 904 (1153)
T PLN03210 874 LDMNGCNNLQ-RVSLNISKLKHLETVDFSDCG 904 (1153)
T ss_pred EECCCCCCcC-ccCcccccccCCCeeecCCCc
Confidence 66655 3343 355556666666666666663
No 416
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.91 E-value=5.5e-24 Score=249.24 Aligned_cols=265 Identities=29% Similarity=0.357 Sum_probs=153.4
Q ss_pred CCCcEEECCCCCCCCCCCCCcCCCCCccEEeccccccCCCCCCcccCCCccccccccCcccccccccccCCCCChhhhcc
Q 039533 161 SKTEILNLGSNHLTGSIPSSLGNLSSIHTISLAYNNLDGTIPNSFGWFENLVFLSLAANNLSVVENKLTGEVPSLEKLQR 240 (949)
Q Consensus 161 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~l~~~~~~l~~l~~ 240 (949)
.+-..|+|++|.|+ .+|..+. ++|+.|++++|+|+ .+|.. +++|++|+|++|+|+.++.. .++
T Consensus 201 ~~~~~LdLs~~~Lt-sLP~~l~--~~L~~L~L~~N~Lt-~LP~l---p~~Lk~LdLs~N~LtsLP~l----------p~s 263 (788)
T PRK15387 201 NGNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLT-SLPAL---PPELRTLEVSGNQLTSLPVL----------PPG 263 (788)
T ss_pred CCCcEEEcCCCCCC-cCCcchh--cCCCEEEccCCcCC-CCCCC---CCCCcEEEecCCccCcccCc----------ccc
Confidence 34567888888888 6777665 37888888888888 45542 46778888887777654310 123
Q ss_pred ccccccccCCCCCCCCCCcchhccccccCcccEEEccCCCCCccCCchhhcccccccEEEccCccccCCCCCCCCCCCcc
Q 039533 241 LQHFTITSNSLGSGGNDDLSFLCSLTNATRLTWMHINSNNFGGLLPGCISNLSKTIKTLFLNNNKIYGSIPAGIGNFVNL 320 (949)
Q Consensus 241 L~~L~l~~N~l~~~~~~~~~~~~~l~~~~~L~~L~L~~N~l~~~~p~~~~~l~~~L~~L~L~~N~l~~~~~~~~~~l~~L 320 (949)
|++|++++| .++. +|. ++..|+.|+|++|+|+ .+|. .+++|
T Consensus 264 L~~L~Ls~N------------------------------~L~~-Lp~----lp~~L~~L~Ls~N~Lt-~LP~---~p~~L 304 (788)
T PRK15387 264 LLELSIFSN------------------------------PLTH-LPA----LPSGLCKLWIFGNQLT-SLPV---LPPGL 304 (788)
T ss_pred cceeeccCC------------------------------chhh-hhh----chhhcCEEECcCCccc-cccc---ccccc
Confidence 344444444 3332 111 2234555566666555 2333 12456
Q ss_pred cEEEeecceecccCCCcccccCCCCEEecCCcccccccCcccccccccceeecccccccccCCCCCCCCCCCcEEEeeCc
Q 039533 321 QRLDMWNNQLSGTIPPAIGELQNLKILGLNRNKLSGNIPPSIGNLKMLLNLFLNDNFLEVSIPSSLGQCESLIEINLSNN 400 (949)
Q Consensus 321 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N 400 (949)
++|+|++|+|++ +|... .+|+.|++++|+|++ +|.. ..+|+.|+|++|+|++ +|.. ..+|+.|++++|
T Consensus 305 ~~LdLS~N~L~~-Lp~lp---~~L~~L~Ls~N~L~~-LP~l---p~~Lq~LdLS~N~Ls~-LP~l---p~~L~~L~Ls~N 372 (788)
T PRK15387 305 QELSVSDNQLAS-LPALP---SELCKLWAYNNQLTS-LPTL---PSGLQELSVSDNQLAS-LPTL---PSELYKLWAYNN 372 (788)
T ss_pred ceeECCCCcccc-CCCCc---ccccccccccCcccc-cccc---ccccceEecCCCccCC-CCCC---Ccccceehhhcc
Confidence 666666666653 33321 235555666666652 3321 1345566666666652 3332 234555666666
Q ss_pred cccCCCCCcccCCcccceeeccCCCccCCCCccccccccccceeeeccccccccCCcccccccchhhcccCccccccccC
Q 039533 401 NLSGTIPPQFFSLSSLSISLDWSRNKLTGSLPIEVGKLKILEFLYVYENRLEGEIPSTFGNCIRLEQLGMGGNLFQGPIS 480 (949)
Q Consensus 401 ~l~~~~p~~~~~l~~l~~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~ 480 (949)
+|+ .+|... .+| ..|++++|+|++ +|.. .++|+.|++++|+|+ .+|..+ .+|+.|++++|+|+ .+|
T Consensus 373 ~L~-~LP~l~---~~L-~~LdLs~N~Lt~-LP~l---~s~L~~LdLS~N~Ls-sIP~l~---~~L~~L~Ls~NqLt-~LP 438 (788)
T PRK15387 373 RLT-SLPALP---SGL-KELIVSGNRLTS-LPVL---PSELKELMVSGNRLT-SLPMLP---SGLLSLSVYRNQLT-RLP 438 (788)
T ss_pred ccc-cCcccc---ccc-ceEEecCCcccC-CCCc---ccCCCEEEccCCcCC-CCCcch---hhhhhhhhccCccc-ccC
Confidence 665 355432 233 456666666663 4432 245777777777777 355432 35677777777777 567
Q ss_pred CCcCCCCCCCEEECCCCcCCCcCcccc
Q 039533 481 SSLGSLRGLRVLDLSQNNLSGEIPKFL 507 (949)
Q Consensus 481 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 507 (949)
..++.+++|+.|+|++|+|++.+|..+
T Consensus 439 ~sl~~L~~L~~LdLs~N~Ls~~~~~~L 465 (788)
T PRK15387 439 ESLIHLSSETTVNLEGNPLSERTLQAL 465 (788)
T ss_pred hHHhhccCCCeEECCCCCCCchHHHHH
Confidence 777777777777777777777666655
No 417
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.91 E-value=3.8e-24 Score=250.58 Aligned_cols=83 Identities=30% Similarity=0.356 Sum_probs=44.0
Q ss_pred CCcEEEeeCccccCCCCCcccCCcccceeeccCCCccCCCCccccccccccceeeeccccccccCCcccccccchhhccc
Q 039533 391 SLIEINLSNNNLSGTIPPQFFSLSSLSISLDWSRNKLTGSLPIEVGKLKILEFLYVYENRLEGEIPSTFGNCIRLEQLGM 470 (949)
Q Consensus 391 ~L~~L~l~~N~l~~~~p~~~~~l~~l~~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l 470 (949)
+|+.|++++|+|+ .+|... +++ +.|++++|+|++ +|.. ..+|+.|+|++|+|+ .+|..++++++|+.|+|
T Consensus 383 ~L~~LdLs~N~Lt-~LP~l~---s~L-~~LdLS~N~Lss-IP~l---~~~L~~L~Ls~NqLt-~LP~sl~~L~~L~~LdL 452 (788)
T PRK15387 383 GLKELIVSGNRLT-SLPVLP---SEL-KELMVSGNRLTS-LPML---PSGLLSLSVYRNQLT-RLPESLIHLSSETTVNL 452 (788)
T ss_pred ccceEEecCCccc-CCCCcc---cCC-CEEEccCCcCCC-CCcc---hhhhhhhhhccCccc-ccChHHhhccCCCeEEC
Confidence 3445555555554 233322 222 345555555552 3432 234555666666666 56666666666666666
Q ss_pred CccccccccCCCc
Q 039533 471 GGNLFQGPISSSL 483 (949)
Q Consensus 471 ~~N~l~~~~~~~~ 483 (949)
++|.|++.++..+
T Consensus 453 s~N~Ls~~~~~~L 465 (788)
T PRK15387 453 EGNPLSERTLQAL 465 (788)
T ss_pred CCCCCCchHHHHH
Confidence 6666666655544
No 418
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.91 E-value=7.6e-24 Score=211.81 Aligned_cols=169 Identities=22% Similarity=0.245 Sum_probs=126.0
Q ss_pred CChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEeecccceecC
Q 039533 713 GSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVGDFGLARILS 792 (949)
Q Consensus 713 gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~ 792 (949)
|+|.+++.. ....+++.+++.|+.|++.||+|||++ + ||+||+++.++.+|+ ||.++...
T Consensus 1 GsL~~~l~~---------~~~~l~~~~~~~i~~qi~~~L~~lH~~---~------kp~Nil~~~~~~~~~--fG~~~~~~ 60 (176)
T smart00750 1 VSLADILEV---------RGRPLNEEEIWAVCLQCLRALRELHRQ---A------KSGNILLTWDGLLKL--DGSVAFKT 60 (176)
T ss_pred CcHHHHHHH---------hCCCCCHHHHHHHHHHHHHHHHHHHhc---C------CcccEeEcCccceee--ccceEeec
Confidence 678888862 234589999999999999999999977 4 999999999999999 99998765
Q ss_pred CCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhccccCCCchhhhcccC
Q 039533 793 PDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKALPDDVMDIVDSS 872 (949)
Q Consensus 793 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 872 (949)
... ..||+.|+|||++.+..++.++|||||||++|||+||+.||.........+.. +....
T Consensus 61 ~~~-------~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~------------~~~~~ 121 (176)
T smart00750 61 PEQ-------SRVDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERELSAILEI------------LLNGM 121 (176)
T ss_pred ccc-------CCCcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHH------------HHHHh
Confidence 432 24889999999999999999999999999999999999998543221111111 11111
Q ss_pred CCCCchhhhhhhchhhhhhhhhhHHHHH--HHHHHHhhccccCCCCCCCCHHHHHHHHHHhHH
Q 039533 873 LLPDDEDLILTGNQRQKQARINSIIECL--ISMVRIGVACSMELPQDRTNMTNVVHELQSIKN 933 (949)
Q Consensus 873 l~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~~ 933 (949)
....+.++ ....... ..+.+++.+|+..+|++||++.|+++.+..+..
T Consensus 122 ~~~~~~~~-------------~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~~~~ 171 (176)
T smart00750 122 PADDPRDR-------------SNLESVSAARSFADFMRVCASRLPQRREAANHYLAHCRALFA 171 (176)
T ss_pred ccCCcccc-------------ccHHHHHhhhhHHHHHHHHHhcccccccCHHHHHHHHHHHHH
Confidence 00000000 0001222 368999999999999999999999999887654
No 419
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.90 E-value=3.5e-23 Score=262.22 Aligned_cols=315 Identities=19% Similarity=0.261 Sum_probs=192.5
Q ss_pred ccccccCCC-CCcEEECCCCCCCCCCCCCcCCCCCccEEeccccccCCCCCCcccCCCccccccccCcccccccccccCC
Q 039533 153 ILSRFSSLS-KTEILNLGSNHLTGSIPSSLGNLSSIHTISLAYNNLDGTIPNSFGWFENLVFLSLAANNLSVVENKLTGE 231 (949)
Q Consensus 153 ~~~~~~~L~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~l~~~ 231 (949)
+|..|..++ +|+.|++.+|.+. .+|..| ...+|++|+|++|++. .+|..+..+++|++|+|++|.. .+.
T Consensus 580 lp~~~~~lp~~Lr~L~~~~~~l~-~lP~~f-~~~~L~~L~L~~s~l~-~L~~~~~~l~~Lk~L~Ls~~~~-------l~~ 649 (1153)
T PLN03210 580 LPEGFDYLPPKLRLLRWDKYPLR-CMPSNF-RPENLVKLQMQGSKLE-KLWDGVHSLTGLRNIDLRGSKN-------LKE 649 (1153)
T ss_pred cCcchhhcCcccEEEEecCCCCC-CCCCcC-CccCCcEEECcCcccc-ccccccccCCCCCEEECCCCCC-------cCc
Confidence 344454443 4677777777776 566665 4567777777777776 5666667777777777765431 122
Q ss_pred CCChhhhccccccccccCCCCCCCCCCcchhccccccCcccEEEccCCCCCccCCchhhcccccccEEEccCccccCCCC
Q 039533 232 VPSLEKLQRLQHFTITSNSLGSGGNDDLSFLCSLTNATRLTWMHINSNNFGGLLPGCISNLSKTIKTLFLNNNKIYGSIP 311 (949)
Q Consensus 232 ~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~~~~L~~L~L~~N~l~~~~p~~~~~l~~~L~~L~L~~N~l~~~~~ 311 (949)
+|.+..+++|++|+|++ |.....+|..+..+. +|+.|++++|..-+.+|
T Consensus 650 ip~ls~l~~Le~L~L~~------------------------------c~~L~~lp~si~~L~-~L~~L~L~~c~~L~~Lp 698 (1153)
T PLN03210 650 IPDLSMATNLETLKLSD------------------------------CSSLVELPSSIQYLN-KLEDLDMSRCENLEILP 698 (1153)
T ss_pred CCccccCCcccEEEecC------------------------------CCCccccchhhhccC-CCCEEeCCCCCCcCccC
Confidence 33333334444444433 333333444444432 35555555443223344
Q ss_pred CCCCCCCcccEEEeecceecccCCCcccccCCCCEEecCCcccccccCcccccccccceeecccccc-------cccCCC
Q 039533 312 AGIGNFVNLQRLDMWNNQLSGTIPPAIGELQNLKILGLNRNKLSGNIPPSIGNLKMLLNLFLNDNFL-------EVSIPS 384 (949)
Q Consensus 312 ~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l-------~~~~p~ 384 (949)
..+ ++++|++|+|++|...+.+|.. ..+|+.|+|++|.+. .+|..+ .+++|+.|++.++.. ....+.
T Consensus 699 ~~i-~l~sL~~L~Lsgc~~L~~~p~~---~~nL~~L~L~~n~i~-~lP~~~-~l~~L~~L~l~~~~~~~l~~~~~~l~~~ 772 (1153)
T PLN03210 699 TGI-NLKSLYRLNLSGCSRLKSFPDI---STNISWLDLDETAIE-EFPSNL-RLENLDELILCEMKSEKLWERVQPLTPL 772 (1153)
T ss_pred CcC-CCCCCCEEeCCCCCCccccccc---cCCcCeeecCCCccc-cccccc-cccccccccccccchhhccccccccchh
Confidence 433 4455555555555433334432 234555555555554 344433 345555555544221 111122
Q ss_pred CCCCCCCCcEEEeeCccccCCCCCcccCCcccceeeccCCCccCCCCccccccccccceeeeccccccccCCcccccccc
Q 039533 385 SLGQCESLIEINLSNNNLSGTIPPQFFSLSSLSISLDWSRNKLTGSLPIEVGKLKILEFLYVYENRLEGEIPSTFGNCIR 464 (949)
Q Consensus 385 ~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~l~~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 464 (949)
.+...++|+.|+|++|...+.+|..+.++++| +.|++++|..-+.+|..+ .+++|+.|+|++|..-..+|.. ..+
T Consensus 773 ~~~~~~sL~~L~Ls~n~~l~~lP~si~~L~~L-~~L~Ls~C~~L~~LP~~~-~L~sL~~L~Ls~c~~L~~~p~~---~~n 847 (1153)
T PLN03210 773 MTMLSPSLTRLFLSDIPSLVELPSSIQNLHKL-EHLEIENCINLETLPTGI-NLESLESLDLSGCSRLRTFPDI---STN 847 (1153)
T ss_pred hhhccccchheeCCCCCCccccChhhhCCCCC-CEEECCCCCCcCeeCCCC-CccccCEEECCCCCcccccccc---ccc
Confidence 23334678888888887777788888888877 678888765444677665 6889999999998655566654 367
Q ss_pred hhhcccCccccccccCCCcCCCCCCCEEECCC-CcCCCcCcccccCCc-cceEeCCCCc
Q 039533 465 LEQLGMGGNLFQGPISSSLGSLRGLRVLDLSQ-NNLSGEIPKFLAGLS-LNNLNLSYND 521 (949)
Q Consensus 465 L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~-N~l~~~~p~~~~~~~-L~~l~ls~N~ 521 (949)
|+.|+|++|.++ .+|.++..+++|+.|+|++ |+|+ .+|.....++ |+.++++++.
T Consensus 848 L~~L~Ls~n~i~-~iP~si~~l~~L~~L~L~~C~~L~-~l~~~~~~L~~L~~L~l~~C~ 904 (1153)
T PLN03210 848 ISDLNLSRTGIE-EVPWWIEKFSNLSFLDMNGCNNLQ-RVSLNISKLKHLETVDFSDCG 904 (1153)
T ss_pred cCEeECCCCCCc-cChHHHhcCCCCCEEECCCCCCcC-ccCcccccccCCCeeecCCCc
Confidence 999999999998 6899999999999999999 5666 4666666665 9999999874
No 420
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.90 E-value=3.6e-24 Score=263.60 Aligned_cols=201 Identities=18% Similarity=0.246 Sum_probs=136.9
Q ss_pred hcCC-CcceeEEeeeecccccC--CccceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHh
Q 039533 679 SIRH-RNLVKVLTACLGADYRG--NDFKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLH 755 (949)
Q Consensus 679 ~l~h-~niv~~~~~~~~~~~~~--~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH 755 (949)
.++| +||.+++++|.....++ ....+.++||+ +++|.+++.. ....+++.+++.++.||++||+|||
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~---------~~~~~~~~~~~~i~~qi~~al~~lH 97 (793)
T PLN00181 28 SLSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDN---------PDRSVDAFECFHVFRQIVEIVNAAH 97 (793)
T ss_pred hhhHHHHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhc---------ccccccHHHHHHHHHHHHHHHHHHH
Confidence 3455 57888888763322111 22466778887 5699999962 2345899999999999999999999
Q ss_pred hCCCCCeEecCCCCCCeeecC-------------------CCceEEeecccceecCCCCC--------------cccccc
Q 039533 756 HDCQPVTAHCDLKPSNVLLDD-------------------YMTARVGDFGLARILSPDHT--------------QTSSFS 802 (949)
Q Consensus 756 ~~~~~~ivHrDlkp~NIll~~-------------------~~~~kl~DfG~a~~~~~~~~--------------~~~~~~ 802 (949)
++ +|+||||||+|||++. ++.+|++|||+++....... ......
T Consensus 98 ~~---gIvHrDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (793)
T PLN00181 98 SQ---GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQIL 174 (793)
T ss_pred hC---CeeeccCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccc
Confidence 77 9999999999999954 44566666666654211000 000011
Q ss_pred ccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhccccCCCchhhhcccCCCCCchhhhh
Q 039533 803 VKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKALPDDVMDIVDSSLLPDDEDLIL 882 (949)
Q Consensus 803 ~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~ 882 (949)
..||+.|||||++.+..++.++|||||||++|||++|.+|+..... ........ ...+.
T Consensus 175 ~~gt~~Y~APE~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~~---~~~~~~~~------------~~~~~------ 233 (793)
T PLN00181 175 AMEMSWYTSPEEDNGSSSNCASDVYRLGVLLFELFCPVSSREEKSR---TMSSLRHR------------VLPPQ------ 233 (793)
T ss_pred cCCCcceEChhhhccCCCCchhhhhhHHHHHHHHhhCCCchhhHHH---HHHHHHHh------------hcChh------
Confidence 3478899999999999999999999999999999999888642110 00000000 00000
Q ss_pred hhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 039533 883 TGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVH 926 (949)
Q Consensus 883 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 926 (949)
..........++.+|++++|.+||+|.||++
T Consensus 234 -------------~~~~~~~~~~~~~~~L~~~P~~Rps~~eil~ 264 (793)
T PLN00181 234 -------------ILLNWPKEASFCLWLLHPEPSCRPSMSELLQ 264 (793)
T ss_pred -------------hhhcCHHHHHHHHHhCCCChhhCcChHHHhh
Confidence 0011223457788999999999999999975
No 421
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.89 E-value=2.4e-23 Score=245.83 Aligned_cols=367 Identities=22% Similarity=0.291 Sum_probs=181.4
Q ss_pred hhcCCCChhhHHHHHHHHhccCCCCCCCccC----ccCCCCcceeee----------------eEEeCCCCcEEEEEcCC
Q 039533 15 LVAGTGNETDRVALLEFKSKSTYDPVGVLGT----WNESIHFCKWYG----------------VTCSRRHQRVTLLDLRS 74 (949)
Q Consensus 15 ~~~~~~~~~~~~aLl~~k~~~~~~~~~~l~s----W~~~~~~C~w~g----------------v~C~~~~~~v~~l~l~~ 74 (949)
+..++...+|.+.+++..+.+.+. +.+.+ |++.+++|.=.. |.|.. +.||.+..-+
T Consensus 55 ~~~~~~~~~~~~~~~~~~~~l~~p--~~~~~~~~~~~~~~~fc~~~~~~~~~l~~~~~~~~~tv~~~~--~~vt~l~~~g 130 (754)
T PRK15370 55 HPPETASPEEIKSKFECLRMLAFP--AYADNIQYSRGGADQYCILSENSQEILSIVFNTEGYTVEGGG--KSVTYTRVTE 130 (754)
T ss_pred CCCCCCCHHHHHHHHHHHHHhcCC--chhhccccccCCCCcccccCCcchhhheeeecCCceEEecCC--Cccccccccc
Confidence 456667789999999998877433 34555 998899995443 66754 3566666554
Q ss_pred CCCCccccCCCCCCCCCceeec----cCceeccc----------cCCcccCcccCcEEeeccccccCcCCCCCCCCccce
Q 039533 75 LKLAGSVSHFIGNLSFLKQLYL----QVNSFTHE----------IPSEIGGLRRLKVLALNNNSICGEIPTNISRCSTLI 140 (949)
Q Consensus 75 ~~l~g~~~~~l~~l~~L~~L~L----~~n~l~~~----------~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 140 (949)
...+.....+ -..-.+... ..+.-.+. +..+ -..+.+.|+|+++.++ .+|..+. +.|+
T Consensus 131 ~~~~~~~~~~---~~~~~~~~~w~~w~~~~~~~~~~~r~~a~~r~~~C--l~~~~~~L~L~~~~Lt-sLP~~Ip--~~L~ 202 (754)
T PRK15370 131 SEQASSASGS---KDAVNYELIWSEWVKEAPAKEAANREEAVQRMRDC--LKNNKTELRLKILGLT-TIPACIP--EQIT 202 (754)
T ss_pred ccccccCCCC---CChhhHHHHHHHHHhcCCCCccccHHHHHHHHHhh--cccCceEEEeCCCCcC-cCCcccc--cCCc
Confidence 3222211110 000000000 00000000 0111 1245677888887777 5665543 2455
Q ss_pred eecCCCccccccccccccCCCCCcEEECCCCCCCCCCCCCcCCCCCccEEeccccccCCCCCCcccCCCccccccccCcc
Q 039533 141 PIHPQNNQLVGKILSRFSSLSKTEILNLGSNHLTGSIPSSLGNLSSIHTISLAYNNLDGTIPNSFGWFENLVFLSLAANN 220 (949)
Q Consensus 141 ~L~l~~n~l~~~~~~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 220 (949)
.|++++|+|+..+...+ ++|+.|+|++|+|+ .+|..+. .+|+.|+|++|+++ .+|..+. ++|++|+|++|+
T Consensus 203 ~L~Ls~N~LtsLP~~l~---~nL~~L~Ls~N~Lt-sLP~~l~--~~L~~L~Ls~N~L~-~LP~~l~--s~L~~L~Ls~N~ 273 (754)
T PRK15370 203 TLILDNNELKSLPENLQ---GNIKTLYANSNQLT-SIPATLP--DTIQEMELSINRIT-ELPERLP--SALQSLDLFHNK 273 (754)
T ss_pred EEEecCCCCCcCChhhc---cCCCEEECCCCccc-cCChhhh--ccccEEECcCCccC-cCChhHh--CCCCEEECcCCc
Confidence 55555555543322221 24455555555554 3343332 23445555555444 3333322 233444444333
Q ss_pred cccccccccCCCCChhhhccccccccccCCCCCCCCCCcchhccccccCcccEEEccCCCCCccCCchhhcccccccEEE
Q 039533 221 LSVVENKLTGEVPSLEKLQRLQHFTITSNSLGSGGNDDLSFLCSLTNATRLTWMHINSNNFGGLLPGCISNLSKTIKTLF 300 (949)
Q Consensus 221 l~~~~~~l~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~~~~L~~L~L~~N~l~~~~p~~~~~l~~~L~~L~ 300 (949)
|+. +|..+ +.+|+.|+
T Consensus 274 L~~-------------------------------------------------------------LP~~l---~~sL~~L~ 289 (754)
T PRK15370 274 ISC-------------------------------------------------------------LPENL---PEELRYLS 289 (754)
T ss_pred cCc-------------------------------------------------------------ccccc---CCCCcEEE
Confidence 322 22211 12344555
Q ss_pred ccCccccCCCCCCCCCCCcccEEEeecceecccCCCcccccCCCCEEecCCcccccccCcccccccccceeecccccccc
Q 039533 301 LNNNKIYGSIPAGIGNFVNLQRLDMWNNQLSGTIPPAIGELQNLKILGLNRNKLSGNIPPSIGNLKMLLNLFLNDNFLEV 380 (949)
Q Consensus 301 L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 380 (949)
|++|+|++ +|..+. ++|+.|++++|+++. +|..+. ++|+.|++++|.+++ +|..+. ++|+.|++++|+|+
T Consensus 290 Ls~N~Lt~-LP~~lp--~sL~~L~Ls~N~Lt~-LP~~l~--~sL~~L~Ls~N~Lt~-LP~~l~--~sL~~L~Ls~N~L~- 359 (754)
T PRK15370 290 VYDNSIRT-LPAHLP--SGITHLNVQSNSLTA-LPETLP--PGLKTLEAGENALTS-LPASLP--PELQVLDVSKNQIT- 359 (754)
T ss_pred CCCCcccc-Ccccch--hhHHHHHhcCCcccc-CCcccc--ccceeccccCCcccc-CChhhc--CcccEEECCCCCCC-
Confidence 55555542 333221 245555555555552 333222 355556666666553 444332 45666666666665
Q ss_pred cCCCCCCCCCCCcEEEeeCccccCCCCCcccCCcccceeeccCCCccCCCCccc----cccccccceeeeccccccccCC
Q 039533 381 SIPSSLGQCESLIEINLSNNNLSGTIPPQFFSLSSLSISLDWSRNKLTGSLPIE----VGKLKILEFLYVYENRLEGEIP 456 (949)
Q Consensus 381 ~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~l~~~L~ls~N~l~~~~p~~----~~~l~~L~~L~Ls~N~l~~~~p 456 (949)
.+|..+. ++|+.|+|++|+|+ .+|..+.. .+ +.|++++|+|+ .+|.. .+.++.+..|++.+|.++
T Consensus 360 ~LP~~lp--~~L~~LdLs~N~Lt-~LP~~l~~--sL-~~LdLs~N~L~-~LP~sl~~~~~~~~~l~~L~L~~Npls---- 428 (754)
T PRK15370 360 VLPETLP--PTITTLDVSRNALT-NLPENLPA--AL-QIMQASRNNLV-RLPESLPHFRGEGPQPTRIIVEYNPFS---- 428 (754)
T ss_pred cCChhhc--CCcCEEECCCCcCC-CCCHhHHH--HH-HHHhhccCCcc-cCchhHHHHhhcCCCccEEEeeCCCcc----
Confidence 3444432 46777777777776 45554432 33 56777777776 44443 334467788888888876
Q ss_pred cccccccchhhcccCccccccc-cCCCcCCCCCCC
Q 039533 457 STFGNCIRLEQLGMGGNLFQGP-ISSSLGSLRGLR 490 (949)
Q Consensus 457 ~~~~~l~~L~~L~l~~N~l~~~-~~~~~~~l~~L~ 490 (949)
...+.+|+.| ++.+.+.|. ++..++.+.+++
T Consensus 429 --~~tl~~L~~L-l~s~~~~gp~i~~~~~~~~~l~ 460 (754)
T PRK15370 429 --ERTIQNMQRL-MSSVGYQGPRVLFAMGDFSIVR 460 (754)
T ss_pred --HHHHHHHHHh-hhcccccCCccccccccccccc
Confidence 2455666666 444554442 333333333333
No 422
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.88 E-value=2.2e-22 Score=218.91 Aligned_cols=168 Identities=23% Similarity=0.137 Sum_probs=130.6
Q ss_pred HHhcCCCCCCeeeeecCceEEEEEEcC-CCEEEEEEEEecCC-----CcchHHHHHHHHHHHhcCCCcceeEEeeeeccc
Q 039533 623 NATSGFSSANLVGVGSFGSVYKGIIDE-GRTTIAVKVFNLQH-----HGASRSFIAECKALKSIRHRNLVKVLTACLGAD 696 (949)
Q Consensus 623 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~-~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 696 (949)
...++|.+.+.||+|+||+||+|++.. +++.||||+..... ....+.+.+|++++++++|+|+++.+..+
T Consensus 15 ~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~~---- 90 (365)
T PRK09188 15 ALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLAT---- 90 (365)
T ss_pred cccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEEc----
Confidence 445789999999999999999998875 67888999875321 12245689999999999999998533221
Q ss_pred ccCCccceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCC-CCCCeeec
Q 039533 697 YRGNDFKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDL-KPSNVLLD 775 (949)
Q Consensus 697 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDl-kp~NIll~ 775 (949)
...++||||+++++|... .. . . ...++.|+++||+|||++ ||+|||| ||+||+++
T Consensus 91 ----~~~~LVmE~~~G~~L~~~-~~---------~-~------~~~~~~~i~~aL~~lH~~---gIiHrDL~KP~NILv~ 146 (365)
T PRK09188 91 ----GKDGLVRGWTEGVPLHLA-RP---------H-G------DPAWFRSAHRALRDLHRA---GITHNDLAKPQNWLMG 146 (365)
T ss_pred ----CCcEEEEEccCCCCHHHh-Cc---------c-c------hHHHHHHHHHHHHHHHHC---CCeeCCCCCcceEEEc
Confidence 146999999999999632 10 0 0 146789999999999977 9999999 99999999
Q ss_pred CCCceEEeecccceecCCCCCccc------cccccCccCccCccccCCC
Q 039533 776 DYMTARVGDFGLARILSPDHTQTS------SFSVKGSLGYIAPEYGVGC 818 (949)
Q Consensus 776 ~~~~~kl~DfG~a~~~~~~~~~~~------~~~~~gt~~y~aPE~~~~~ 818 (949)
.++.+||+|||+|+.+........ -....+++.|+|||++...
T Consensus 147 ~~~~ikLiDFGlA~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~~ 195 (365)
T PRK09188 147 PDGEAAVIDFQLASVFRRRGALYRIAAYEDLRHLLKHKRTYAPDALTPR 195 (365)
T ss_pred CCCCEEEEECccceecccCcchhhhhhhhhhhhhhccCccCCcccCChh
Confidence 999999999999998765443111 1245688999999987754
No 423
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.88 E-value=8e-22 Score=198.26 Aligned_cols=265 Identities=16% Similarity=0.183 Sum_probs=204.3
Q ss_pred CCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCCcchHHHHHHHHHHHhcC-CCcceeEEeeeecccccCCcccee
Q 039533 627 GFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHGASRSFIAECKALKSIR-HRNLVKVLTACLGADYRGNDFKAS 705 (949)
Q Consensus 627 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~~~~~l 705 (949)
.|.++++||+|.||.++.|+.--++++||||.-....+ ..++..|.+..+.+. .+.|..+|-+..+.. +-.+
T Consensus 29 hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS~--APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~-----~NiL 101 (449)
T KOG1165|consen 29 HYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKSE--APQLRDEYRTYKLLGGTEGIPQVYYFGQEGK-----YNIL 101 (449)
T ss_pred cceeccccccCcceeeecccccccCceEEEEeccccCC--cchHHHHHHHHHHHcCCCCCCceeeeccccc-----hhhh
Confidence 68999999999999999999988899999998654433 457888999999884 689999886643333 6789
Q ss_pred EeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCC-----Cce
Q 039533 706 VYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDY-----MTA 780 (949)
Q Consensus 706 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~-----~~~ 780 (949)
|+|.+ |.||+|++. -.++.++..++..||.|+..-++|+|++ .+|.|||||+|+||... ..+
T Consensus 102 VidLL-GPSLEDLFD---------~CgR~FSvKTV~miA~Qmi~rie~vH~k---~LIYRDIKPdNFLIGrp~~k~~n~I 168 (449)
T KOG1165|consen 102 VIDLL-GPSLEDLFD---------LCGRRFSVKTVAMIAKQMITRIEYVHEK---DLIYRDIKPDNFLIGRPGTKDANVI 168 (449)
T ss_pred hhhhh-CcCHHHHHH---------HhcCcccHHhHHHHHHHHHHHHHHHHhc---ceeecccCccceeecCCCCCCCceE
Confidence 99998 789999886 2457799999999999999999999988 89999999999999643 358
Q ss_pred EEeecccceecCCCCC-----ccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCcccccc--Cchh
Q 039533 781 RVGDFGLARILSPDHT-----QTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEG--DINL 853 (949)
Q Consensus 781 kl~DfG~a~~~~~~~~-----~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~--~~~~ 853 (949)
.++|||+|+.+.+..+ ........||.+||+-....+...+.+.|+=|+|-++.+.+-|..||+..... ...+
T Consensus 169 hiiDFGmAK~YrDp~TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLKA~tnK~kY 248 (449)
T KOG1165|consen 169 HIIDFGMAKEYRDPKTKQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKADTNKEKY 248 (449)
T ss_pred EEEeccchhhhcCccccccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCccccccCcchHHHH
Confidence 9999999999877655 22233456999999999988999999999999999999999999999744221 1111
Q ss_pred hhhccccCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHHhHH
Q 039533 854 HNFGRKALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHELQSIKN 933 (949)
Q Consensus 854 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~~ 933 (949)
.....+.....+. .-+...|+++.+-+...-..+-++-|..+-+...+..+.+
T Consensus 249 eKIGe~Kr~T~i~---------------------------~Lc~g~P~efa~Yl~yvR~L~F~E~PDYdylr~Lf~dvld 301 (449)
T KOG1165|consen 249 EKIGETKRSTPIE---------------------------VLCEGFPEEFATYLRYVRRLDFFETPDYDYLRKLFDDVLD 301 (449)
T ss_pred HHhccccccCCHH---------------------------HHHhcCHHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHHH
Confidence 1111111010111 1123445566666666667788999999988888888877
Q ss_pred hhccC
Q 039533 934 ILLGV 938 (949)
Q Consensus 934 ~~~~~ 938 (949)
....+
T Consensus 302 r~g~t 306 (449)
T KOG1165|consen 302 RLGET 306 (449)
T ss_pred hcCCc
Confidence 76655
No 424
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.88 E-value=1.3e-21 Score=214.62 Aligned_cols=274 Identities=23% Similarity=0.209 Sum_probs=200.4
Q ss_pred CCCCCCeeeeecCceEEEEEEcCCC-EEEEEEEEecCCCcchHHHHHHHHHHHhcCC----CcceeEEeeeecccccCCc
Q 039533 627 GFSSANLVGVGSFGSVYKGIIDEGR-TTIAVKVFNLQHHGASRSFIAECKALKSIRH----RNLVKVLTACLGADYRGND 701 (949)
Q Consensus 627 ~y~~~~~lg~G~~g~Vy~~~~~~~~-~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h----~niv~~~~~~~~~~~~~~~ 701 (949)
+|.+.+.||+|+||.||.|.+..++ ..+|+|+...........+..|..++..+.. +++.++++... ....
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~----~~~~ 94 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGR----STED 94 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEecc----CCCc
Confidence 7999999999999999999997654 6799998875543333378889999999863 68888887753 2344
Q ss_pred cceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCC----
Q 039533 702 FKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDY---- 777 (949)
Q Consensus 702 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~---- 777 (949)
+.++||+.+ |.+|.++.... ..+.++..++..|+.|++.+|+++|+. |++||||||+|+++...
T Consensus 95 ~~~iVM~l~-G~sL~dl~~~~--------~~~~fs~~T~l~ia~q~l~~l~~lH~~---G~iHRDiKp~N~~~g~~~~~~ 162 (322)
T KOG1164|consen 95 FNFIVMSLL-GPSLEDLRKRN--------PPGRFSRKTVLRIAIQNLNALEDLHSK---GFIHRDIKPENFVVGQSSRSE 162 (322)
T ss_pred eeEEEEecc-CccHHHHHHhC--------CCCCcCHhHHHHHHHHHHHHHHHHHhc---CcccCCcCHHHeeecCCCCcc
Confidence 789999988 78999987521 146799999999999999999999977 99999999999999854
Q ss_pred -CceEEeecccce--ecCCCCC----cc-c-cccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccccc
Q 039533 778 -MTARVGDFGLAR--ILSPDHT----QT-S-SFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFE 848 (949)
Q Consensus 778 -~~~kl~DfG~a~--~~~~~~~----~~-~-~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~ 848 (949)
..+.+.|||+|+ .+..... .. . .....||..|+++....+...+.+.|+||++.++.|++.|..||.....
T Consensus 163 ~~~~~llDfGlar~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~ 242 (322)
T KOG1164|consen 163 VRTLYLLDFGLARRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALEM 242 (322)
T ss_pred cceEEEEecCCCccccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCccccc
Confidence 469999999998 3322221 11 1 1235599999999999999999999999999999999999999854322
Q ss_pred cCchhhhhccccCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHH
Q 039533 849 GDINLHNFGRKALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHEL 928 (949)
Q Consensus 849 ~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L 928 (949)
... .... ........... .....+..+.++...+-..+..++|....+...+
T Consensus 243 ~~~-~~~~---------~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~Pdy~~~~~~l 294 (322)
T KOG1164|consen 243 TDL-KSKF---------EKDPRKLLTDR------------------FGDLKPEEFAKILEYIDSLDYEDKPDYEKLAELL 294 (322)
T ss_pred cch-HHHH---------HHHhhhhcccc------------------ccCCChHHHHHHHHHhhccCCcCCCCHHHHHHHH
Confidence 111 0000 00000000000 0011234456666666668999999999999999
Q ss_pred HHhHHhhccCCCCCCc
Q 039533 929 QSIKNILLGVELCPPC 944 (949)
Q Consensus 929 ~~i~~~~~~~~~~~~~ 944 (949)
++...........|+.
T Consensus 295 ~~~~~~~~~~~~~~~d 310 (322)
T KOG1164|consen 295 KDVFDSEGSKEDSPFD 310 (322)
T ss_pred HHHHHhcCCCCCCCCc
Confidence 8887775444445543
No 425
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.87 E-value=2.4e-22 Score=193.14 Aligned_cols=265 Identities=18% Similarity=0.229 Sum_probs=194.1
Q ss_pred hcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCCcchHHHHHHHHHHHhcCC-CcceeEEeeeecccccCCccc
Q 039533 625 TSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHGASRSFIAECKALKSIRH-RNLVKVLTACLGADYRGNDFK 703 (949)
Q Consensus 625 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h-~niv~~~~~~~~~~~~~~~~~ 703 (949)
.+.|.++++||.|+||.+|.|..-.+|+.||||+-+.... ..++..|..+...+++ ..|.++..|..+.. +.
T Consensus 14 ~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~--hpqL~yEskvY~iL~~g~GiP~i~~y~~e~~-----yn 86 (341)
T KOG1163|consen 14 GGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKAK--HPQLLYESKVYRILQGGVGIPHIRHYGTEKD-----YN 86 (341)
T ss_pred ccceEEEEeecCCchhheeeeeeccCCceEEEEeecccCC--CcchhHHHHHHHHhccCCCCchhhhhccccc-----cc
Confidence 4679999999999999999999999999999999754332 3467889999999875 56777766644443 77
Q ss_pred eeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeec---CCCce
Q 039533 704 ASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLD---DYMTA 780 (949)
Q Consensus 704 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~---~~~~~ 780 (949)
.+||+.+ |.+|++.+.- ..+.++..+++-++.|++.-++|+|.+ +++||||||+|+|.. ....+
T Consensus 87 vlVMdLL-GPsLEdLfnf---------C~R~ftmkTvLMLaDQml~RiEyvH~r---~fiHRDIKPdNFLMGlgrh~~kl 153 (341)
T KOG1163|consen 87 VLVMDLL-GPSLEDLFNF---------CSRRFTMKTVLMLADQMLSRIEYVHLR---NFIHRDIKPDNFLMGLGRHCNKL 153 (341)
T ss_pred eeeeecc-CccHHHHHHH---------HhhhhhHHhHHHHHHHHHHHHHHHHhh---ccccccCCccceeeccccccceE
Confidence 9999998 7899998863 345689999999999999999999977 899999999999996 33468
Q ss_pred EEeecccceecCCCCC-----ccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhh
Q 039533 781 RVGDFGLARILSPDHT-----QTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHN 855 (949)
Q Consensus 781 kl~DfG~a~~~~~~~~-----~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~ 855 (949)
.++|||+|+.+.+..+ ........||.+|.+-....+...+.+.|+=|+|.++.+.--|..||+........
T Consensus 154 ~LIDFGLaKky~d~~t~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglka~tk~--- 230 (341)
T KOG1163|consen 154 YLIDFGLAKKYRDIRTRQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLKAATKK--- 230 (341)
T ss_pred EEEeccchhhhccccccccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccchhhHH---
Confidence 9999999998765443 22233456999999988888888899999999999999999999999754322100
Q ss_pred hccccCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHHhHHh
Q 039533 856 FGRKALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHELQSIKNI 934 (949)
Q Consensus 856 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~~~ 934 (949)
+....+.+..+....+ .-+...|.++.-.+..|-..--++-|...-+.+.+.-+...
T Consensus 231 -------QKyEkI~EkK~s~~ie---------------~LC~G~P~EF~myl~Y~R~L~F~E~Pdy~ylrqlFriLfr~ 287 (341)
T KOG1163|consen 231 -------QKYEKISEKKMSTPIE---------------VLCKGFPAEFAMYLNYCRGLGFEEKPDYMYLRQLFRILFRT 287 (341)
T ss_pred -------HHHHHHHHhhcCCCHH---------------HHhCCCcHHHHHHHHHHhhcCCCCCCcHHHHHHHHHHHHhh
Confidence 0011111111111000 01123344556666677777777777777666666555433
No 426
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.87 E-value=4.9e-23 Score=200.78 Aligned_cols=250 Identities=22% Similarity=0.315 Sum_probs=186.4
Q ss_pred CCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCC--cchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCccceeE
Q 039533 629 SSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHH--GASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFKASV 706 (949)
Q Consensus 629 ~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv 706 (949)
....+|.+...|..|+|++. |..+++|++....- ...++|..|.-.++-+.||||.++++.|..+. ...++
T Consensus 193 nl~tkl~e~hsgelwrgrwq--gndivakil~vr~~t~risrdfneefp~lrifshpnilpvlgacnspp-----nlv~i 265 (448)
T KOG0195|consen 193 NLITKLAESHSGELWRGRWQ--GNDIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNSPP-----NLVII 265 (448)
T ss_pred hhhhhhccCCCccccccccc--CcchhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccCCC-----CceEe
Confidence 34467889999999999997 55688888764432 23468999999999999999999999997665 78999
Q ss_pred eeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEeecc
Q 039533 707 YEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVGDFG 786 (949)
Q Consensus 707 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~DfG 786 (949)
..||+.|+|+..++.. ..-..+..++.+++.++|+|++|||+- .+-|.---+.+..+++|++.+++|+= +
T Consensus 266 sq~mp~gslynvlhe~--------t~vvvd~sqav~faldiargmaflhsl-ep~ipr~~lns~hvmidedltarism-a 335 (448)
T KOG0195|consen 266 SQYMPFGSLYNVLHEQ--------TSVVVDHSQAVRFALDIARGMAFLHSL-EPMIPRFYLNSKHVMIDEDLTARISM-A 335 (448)
T ss_pred eeeccchHHHHHHhcC--------ccEEEecchHHHHHHHHHhhHHHHhhc-chhhhhhhcccceEEecchhhhheec-c
Confidence 9999999999999843 233467779999999999999999987 44455557899999999999988751 1
Q ss_pred cceecCCCCCccccccccCccCccCccccCCCccC---CccchHHHHHHHHHHHhCCCCCccccccCchhhhhccccCCC
Q 039533 787 LARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVS---TNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKALPD 863 (949)
Q Consensus 787 ~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~---~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~ 863 (949)
-+++. .......-.+.||+||.++..+.+ .++|+|||++++||+-|...||.+....+... +.
T Consensus 336 d~kfs------fqe~gr~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspmecgm-----ki--- 401 (448)
T KOG0195|consen 336 DTKFS------FQEVGRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECGM-----KI--- 401 (448)
T ss_pred cceee------eeccccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhhh-----hh---
Confidence 11111 001122246889999998876533 67999999999999999999997543321110 00
Q ss_pred chhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHHhH
Q 039533 864 DVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHELQSIK 932 (949)
Q Consensus 864 ~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~ 932 (949)
..+-++..+ +......+.+++.-|+..||.+||.+..|+-.|+++.
T Consensus 402 -aleglrv~i----------------------ppgis~hm~klm~icmnedpgkrpkfdmivpilekm~ 447 (448)
T KOG0195|consen 402 -ALEGLRVHI----------------------PPGISRHMNKLMNICMNEDPGKRPKFDMIVPILEKMI 447 (448)
T ss_pred -hhccccccC----------------------CCCccHHHHHHHHHHhcCCCCcCCCcceehhhHHHhc
Confidence 001111111 1244567889999999999999999999999998764
No 427
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.86 E-value=9e-22 Score=232.58 Aligned_cols=255 Identities=26% Similarity=0.440 Sum_probs=131.1
Q ss_pred eeeeEEeCCCCcEEEEEcCCCCCCccccCCCCCCCCCceeeccCceeccccCCcccCcccCcEEeeccccccCcCCCCCC
Q 039533 55 WYGVTCSRRHQRVTLLDLRSLKLAGSVSHFIGNLSFLKQLYLQVNSFTHEIPSEIGGLRRLKVLALNNNSICGEIPTNIS 134 (949)
Q Consensus 55 w~gv~C~~~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 134 (949)
|.-..|-.. .++.|++++++++ .+|..+. ++|+.|+|++|+++ .+|..+. ++|++|+|++|+|+ .+|..+.
T Consensus 170 ~r~~~Cl~~--~~~~L~L~~~~Lt-sLP~~Ip--~~L~~L~Ls~N~Lt-sLP~~l~--~nL~~L~Ls~N~Lt-sLP~~l~ 240 (754)
T PRK15370 170 QRMRDCLKN--NKTELRLKILGLT-TIPACIP--EQITTLILDNNELK-SLPENLQ--GNIKTLYANSNQLT-SIPATLP 240 (754)
T ss_pred HHHHhhccc--CceEEEeCCCCcC-cCCcccc--cCCcEEEecCCCCC-cCChhhc--cCCCEEECCCCccc-cCChhhh
Confidence 333456433 4677888887777 3555443 46778888888877 5665543 47778888887776 5565432
Q ss_pred CCccceeecCCCccccccccccccCCCCCcEEECCCCCCCCCCCCCcCCCCCccEEeccccccCCCCCCcccCCCccccc
Q 039533 135 RCSTLIPIHPQNNQLVGKILSRFSSLSKTEILNLGSNHLTGSIPSSLGNLSSIHTISLAYNNLDGTIPNSFGWFENLVFL 214 (949)
Q Consensus 135 ~l~~L~~L~l~~n~l~~~~~~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 214 (949)
.+| +.|+|++|.++ .+|..+. ++|+.|+|++|+|+ .+|..+. ++|++|
T Consensus 241 --~~L------------------------~~L~Ls~N~L~-~LP~~l~--s~L~~L~Ls~N~L~-~LP~~l~--~sL~~L 288 (754)
T PRK15370 241 --DTI------------------------QEMELSINRIT-ELPERLP--SALQSLDLFHNKIS-CLPENLP--EELRYL 288 (754)
T ss_pred --ccc------------------------cEEECcCCccC-cCChhHh--CCCCEEECcCCccC-ccccccC--CCCcEE
Confidence 234 45555555554 3444332 34555555555555 3444332 345555
Q ss_pred cccCcccccccccccCCCCChhhhccccccccccCCCCCCCCCCcchhccccccCcccEEEccCCCCCccCCchhhcccc
Q 039533 215 SLAANNLSVVENKLTGEVPSLEKLQRLQHFTITSNSLGSGGNDDLSFLCSLTNATRLTWMHINSNNFGGLLPGCISNLSK 294 (949)
Q Consensus 215 ~Ls~N~l~~~~~~l~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~~~~L~~L~L~~N~l~~~~p~~~~~l~~ 294 (949)
+|++|+|+.++.. +| ++|++|++++|+++.. |..+ ++
T Consensus 289 ~Ls~N~Lt~LP~~----lp-----~sL~~L~Ls~N~Lt~L-------------------------------P~~l---~~ 325 (754)
T PRK15370 289 SVYDNSIRTLPAH----LP-----SGITHLNVQSNSLTAL-------------------------------PETL---PP 325 (754)
T ss_pred ECCCCccccCccc----ch-----hhHHHHHhcCCccccC-------------------------------Cccc---cc
Confidence 5555555433211 11 1233444444433321 1111 12
Q ss_pred cccEEEccCccccCCCCCCCCCCCcccEEEeecceecccCCCcccccCCCCEEecCCcccccccCcccccccccceeecc
Q 039533 295 TIKTLFLNNNKIYGSIPAGIGNFVNLQRLDMWNNQLSGTIPPAIGELQNLKILGLNRNKLSGNIPPSIGNLKMLLNLFLN 374 (949)
Q Consensus 295 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 374 (949)
+|+.|++++|.+++ +|..+. ++|+.|+|++|+|+ .+|..+. ++|+.|+|++|+|+ .+|..+. ..|+.|+++
T Consensus 326 sL~~L~Ls~N~Lt~-LP~~l~--~sL~~L~Ls~N~L~-~LP~~lp--~~L~~LdLs~N~Lt-~LP~~l~--~sL~~LdLs 396 (754)
T PRK15370 326 GLKTLEAGENALTS-LPASLP--PELQVLDVSKNQIT-VLPETLP--PTITTLDVSRNALT-NLPENLP--AALQIMQAS 396 (754)
T ss_pred cceeccccCCcccc-CChhhc--CcccEEECCCCCCC-cCChhhc--CCcCEEECCCCcCC-CCCHhHH--HHHHHHhhc
Confidence 34455555555542 333332 45556666666555 3444332 45666666666666 3444332 245566666
Q ss_pred cccccccCCCC----CCCCCCCcEEEeeCcccc
Q 039533 375 DNFLEVSIPSS----LGQCESLIEINLSNNNLS 403 (949)
Q Consensus 375 ~N~l~~~~p~~----~~~l~~L~~L~l~~N~l~ 403 (949)
+|+|+ .+|.. +..++++..|++.+|.++
T Consensus 397 ~N~L~-~LP~sl~~~~~~~~~l~~L~L~~Npls 428 (754)
T PRK15370 397 RNNLV-RLPESLPHFRGEGPQPTRIIVEYNPFS 428 (754)
T ss_pred cCCcc-cCchhHHHHhhcCCCccEEEeeCCCcc
Confidence 66655 33332 233455666666666654
No 428
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.85 E-value=4.4e-22 Score=231.17 Aligned_cols=254 Identities=21% Similarity=0.262 Sum_probs=188.0
Q ss_pred CCCeeeeecCceEEEEEEcCCCEEEEEEEEecC--CCcc----hHHHHHHHHHHHhcCCCcceeEEeeeecccccCCccc
Q 039533 630 SANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQ--HHGA----SRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFK 703 (949)
Q Consensus 630 ~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~--~~~~----~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 703 (949)
...++|.|.+|.|+.+......+..+.|.++.. .... ...+..|+-+-..++|+|++..+..+.+.. ..
T Consensus 322 ~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~-----~~ 396 (601)
T KOG0590|consen 322 PGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEID-----GI 396 (601)
T ss_pred ccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcc-----cc
Confidence 457899999999988888766666666655421 1111 122556777778889999988776654433 33
Q ss_pred eeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEe
Q 039533 704 ASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVG 783 (949)
Q Consensus 704 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~ 783 (949)
.-+|||+++ +|..++.. ...++..++..++.|+..|++|+|+. ||.|||+|++|++++.+|.+||+
T Consensus 397 ~~~mE~~~~-Dlf~~~~~----------~~~~~~~e~~c~fKqL~~Gv~y~h~~---GiahrdlK~enll~~~~g~lki~ 462 (601)
T KOG0590|consen 397 LQSMEYCPY-DLFSLVMS----------NGKLTPLEADCFFKQLLRGVKYLHSM---GLAHRDLKLENLLVTENGILKII 462 (601)
T ss_pred hhhhhcccH-HHHHHHhc----------ccccchhhhhHHHHHHHHHHHHHHhc---CceeccCccccEEEecCCceEEe
Confidence 334999999 99999862 24578889999999999999999977 99999999999999999999999
Q ss_pred ecccceecCCCCCc--cccccccCccCccCccccCCCccC-CccchHHHHHHHHHHHhCCCCCccccccCchhhhhcccc
Q 039533 784 DFGLARILSPDHTQ--TSSFSVKGSLGYIAPEYGVGCEVS-TNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKA 860 (949)
Q Consensus 784 DfG~a~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~-~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~ 860 (949)
|||.+.....+... .......|+..|+|||++.+..|+ ...||||.|++++.|.+|+.||......+..+.. ..
T Consensus 463 Dfg~~~vf~~~~e~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~~~---~~ 539 (601)
T KOG0590|consen 463 DFGAASVFRYPWEKNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSFKT---NN 539 (601)
T ss_pred ecCcceeeccCcchhhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccchhh---hc
Confidence 99999876544443 344467799999999999999887 4689999999999999999999755444332200 00
Q ss_pred CCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 039533 861 LPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVH 926 (949)
Q Consensus 861 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 926 (949)
...+ ..............+.+...++.++++.||.+|.|+++|++
T Consensus 540 ~~~~---------------------~~~~~~~~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~ 584 (601)
T KOG0590|consen 540 YSDQ---------------------RNIFEGPNRLLSLLPRETRIIIYRMLQLDPTKRITIEQILN 584 (601)
T ss_pred cccc---------------------cccccChHHHHHhchhhHHHHHHHHccCChhheecHHHHhh
Confidence 0000 00000111123456677888999999999999999999986
No 429
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.83 E-value=5.8e-21 Score=192.49 Aligned_cols=175 Identities=13% Similarity=0.092 Sum_probs=134.7
Q ss_pred hcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCCcchHH---------HHHHHHHHHhcCCCcceeEEeeeecc
Q 039533 625 TSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHGASRS---------FIAECKALKSIRHRNLVKVLTACLGA 695 (949)
Q Consensus 625 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~---------~~~E~~~l~~l~h~niv~~~~~~~~~ 695 (949)
.++|++.+++|.|+||.||.+.. ++..+|+|+++.......+. +.+|+..+.++.|++|..+.+++...
T Consensus 30 ~~~y~~~~~l~~~~f~~v~l~~~--~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~~ 107 (232)
T PRK10359 30 SYNIKTIKVFRNIDDTKVSLIDT--DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLLA 107 (232)
T ss_pred hCceEEEEEecCCCceEEEEEec--CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeeec
Confidence 47899999999999999999766 36689999997554433322 67999999999999999999886644
Q ss_pred ccc---CCccceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCe
Q 039533 696 DYR---GNDFKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNV 772 (949)
Q Consensus 696 ~~~---~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NI 772 (949)
++. .....++||||++|.+|.++.. ++. ....+++.++..+|.. |++|||+||+||
T Consensus 108 ~~~~~~~~~~~~lvmEyi~G~tL~~~~~--------------~~~----~~~~~i~~~l~~lH~~---gi~H~Dikp~Ni 166 (232)
T PRK10359 108 ERKTLRYAHTYIMLIEYIEGVELNDMPE--------------ISE----DVKAKIKASIESLHQH---GMVSGDPHKGNF 166 (232)
T ss_pred ccccccccCCeEEEEEEECCccHHHhhh--------------ccH----HHHHHHHHHHHHHHHc---CCccCCCChHHE
Confidence 321 1345789999999999988742 222 2466999999999977 999999999999
Q ss_pred eecCCCceEEeecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHH
Q 039533 773 LLDDYMTARVGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELV 837 (949)
Q Consensus 773 ll~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~ell 837 (949)
+++.++ ++++|||.......+..... +.....+..++||||||+++....
T Consensus 167 li~~~g-i~liDfg~~~~~~e~~a~d~--------------~vler~y~~~~di~~lg~~~~~~~ 216 (232)
T PRK10359 167 IVSKNG-LRIIDLSGKRCTAQRKAKDR--------------IDLERHYGIKNEIKDLGYYLLIYK 216 (232)
T ss_pred EEeCCC-EEEEECCCcccccchhhHHH--------------HHHHhHhcccccccceeEeehHHH
Confidence 999988 99999998876533222111 233345667999999999977543
No 430
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.82 E-value=2.1e-19 Score=199.78 Aligned_cols=260 Identities=27% Similarity=0.329 Sum_probs=192.8
Q ss_pred CCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCCc---chHHHHHHHHHHHhcCCC-cceeEEeeeecccccCCccc
Q 039533 628 FSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHG---ASRSFIAECKALKSIRHR-NLVKVLTACLGADYRGNDFK 703 (949)
Q Consensus 628 y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~-niv~~~~~~~~~~~~~~~~~ 703 (949)
|.+.+.||.|+||.||++.+. ..+++|.+...... ....+.+|+..++.+.|+ +++++++++.... ..
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~---~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~-----~~ 73 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR---KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEG-----SL 73 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec---cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCC-----EE
Confidence 677889999999999999987 78899998755433 357899999999999988 7999999874332 47
Q ss_pred eeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCC-ceEE
Q 039533 704 ASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYM-TARV 782 (949)
Q Consensus 704 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~-~~kl 782 (949)
+++++++.++++.+++...... ..++......++.|++.+++|+|+. +++|||+||+||+++..+ .+++
T Consensus 74 ~~~~~~~~~~~l~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~l~~~H~~---~~~hrd~kp~nil~~~~~~~~~l 143 (384)
T COG0515 74 YLVMEYVDGGSLEDLLKKIGRK-------GPLSESEALFILAQILSALEYLHSK---GIIHRDIKPENILLDRDGRVVKL 143 (384)
T ss_pred EEEEecCCCCcHHHHHHhcccc-------cCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeeecCCCCeEEE
Confidence 9999999999999777521100 3688899999999999999999977 899999999999999888 7999
Q ss_pred eecccceecCCCCCcc----ccccccCccCccCccccCC---CccCCccchHHHHHHHHHHHhCCCCCcccccc--Cchh
Q 039533 783 GDFGLARILSPDHTQT----SSFSVKGSLGYIAPEYGVG---CEVSTNGDVYSYGILLLELVIGKKPIDIMFEG--DINL 853 (949)
Q Consensus 783 ~DfG~a~~~~~~~~~~----~~~~~~gt~~y~aPE~~~~---~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~--~~~~ 853 (949)
+|||.++......... ......|+..|+|||...+ ..++...|+||+|++++++++|..||...... ....
T Consensus 144 ~dfg~~~~~~~~~~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~ 223 (384)
T COG0515 144 IDFGLAKLLPDPGSTSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQT 223 (384)
T ss_pred eccCcceecCCCCccccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccccHHHH
Confidence 9999998665443221 1235669999999999987 57889999999999999999999997543221 0011
Q ss_pred hhhccccCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHH
Q 039533 854 HNFGRKALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHE 927 (949)
Q Consensus 854 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 927 (949)
.......... ........ ... ......+.+++..|+..+|..|.++.+....
T Consensus 224 ~~~~~~~~~~--------~~~~~~~~------------~~~--~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 275 (384)
T COG0515 224 LKIILELPTP--------SLASPLSP------------SNP--ELISKAASDLLKKLLAKDPKNRLSSSSDLSH 275 (384)
T ss_pred HHHHHhcCCc--------ccccccCc------------ccc--chhhHHHHHHHHHHHhcCchhcCCHHHHhhc
Confidence 1110000000 00000000 000 1223467788889999999999999987765
No 431
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.81 E-value=7.3e-20 Score=183.43 Aligned_cols=141 Identities=15% Similarity=0.099 Sum_probs=108.1
Q ss_pred CCeeeeecCceEEEEEEcCCCEEEEEEEEecCCCc--c-------hHH-----------------HHHHHHHHHhcCCCc
Q 039533 631 ANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHG--A-------SRS-----------------FIAECKALKSIRHRN 684 (949)
Q Consensus 631 ~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~--~-------~~~-----------------~~~E~~~l~~l~h~n 684 (949)
...||+|++|.||+|.+. +|+.||||+++..... . ..+ ...|++.+.++.+++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~-~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~ 80 (190)
T cd05147 2 NGCISTGKEANVYHATTA-NGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAG 80 (190)
T ss_pred CCccccccceEEEEEECC-CCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence 468999999999999997 8999999999754211 1 112 234999999998877
Q ss_pred ceeEEeeeecccccCCccceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHH-hhCCCCCeE
Q 039533 685 LVKVLTACLGADYRGNDFKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYL-HHDCQPVTA 763 (949)
Q Consensus 685 iv~~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~L-H~~~~~~iv 763 (949)
+.....+.. ...++||||++++++..... ....++..++..++.|++.+|+|+ |+. +|+
T Consensus 81 v~~p~~~~~-------~~~~iVmE~i~g~~l~~~~~----------~~~~~~~~~~~~i~~qi~~~L~~l~H~~---gii 140 (190)
T cd05147 81 IPCPEPILL-------KSHVLVMEFIGDDGWAAPRL----------KDAPLSESKARELYLQVIQIMRILYQDC---RLV 140 (190)
T ss_pred CCCCcEEEe-------cCCEEEEEEeCCCCCcchhh----------hcCCCCHHHHHHHHHHHHHHHHHHHHhC---Ccc
Confidence 643332211 12489999999877654432 123578899999999999999999 666 899
Q ss_pred ecCCCCCCeeecCCCceEEeecccceecCC
Q 039533 764 HCDLKPSNVLLDDYMTARVGDFGLARILSP 793 (949)
Q Consensus 764 HrDlkp~NIll~~~~~~kl~DfG~a~~~~~ 793 (949)
||||||+||++++ +.++|+|||+|.....
T Consensus 141 HrDlkP~NIli~~-~~v~LiDFG~a~~~~~ 169 (190)
T cd05147 141 HADLSEYNLLYHD-GKLYIIDVSQSVEHDH 169 (190)
T ss_pred cCCCCHHHEEEEC-CcEEEEEccccccCCC
Confidence 9999999999984 7899999999976543
No 432
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.80 E-value=3.3e-20 Score=212.92 Aligned_cols=250 Identities=20% Similarity=0.244 Sum_probs=176.4
Q ss_pred CCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCCc-chHHHH---HHHHHHHhcCCCcceeEEeeeecccccCCcc
Q 039533 627 GFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHG-ASRSFI---AECKALKSIRHRNLVKVLTACLGADYRGNDF 702 (949)
Q Consensus 627 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~-~~~~~~---~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 702 (949)
+|...+.||.+.|=.|.+|+++ .|. |+||++-..... ..+.+. .|++ ...++|||++++.-+- .....
T Consensus 24 e~~~~~~LGstRFlKv~r~k~~-eG~-vVvKVFvk~~p~~sL~~~~qrL~~ik-~~l~~~pn~lPfqk~~-----~t~kA 95 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKDR-EGL-VVVKVFVKQDPTISLRPFKQRLEEIK-FALMKAPNCLPFQKVL-----VTDKA 95 (1431)
T ss_pred ceeeecccCchhhhhhhhccCC-Cce-EEEEEEeccCCCCCchHHHHHHHHHH-HHhhcCCcccchHHHH-----HhhHH
Confidence 5777899999999999999998 344 999999765532 233343 4444 4555899999987552 23346
Q ss_pred ceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEE
Q 039533 703 KASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARV 782 (949)
Q Consensus 703 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl 782 (949)
.|+|-+|+.+ +|+|.+. .++-+...+.+.|+.|++.|+..+|.. ||+|||||.+||||+.-.-+.|
T Consensus 96 AylvRqyvkh-nLyDRlS----------TRPFL~~iEKkWiaFQLL~al~qcH~~---gVcHGDIKsENILiTSWNW~~L 161 (1431)
T KOG1240|consen 96 AYLVRQYVKH-NLYDRLS----------TRPFLVLIEKKWIAFQLLKALSQCHKL---GVCHGDIKSENILITSWNWLYL 161 (1431)
T ss_pred HHHHHHHHhh-hhhhhhc----------cchHHHHHHHHHHHHHHHHHHHHHHHc---CccccccccceEEEeeechhhh
Confidence 7888888865 8999986 456678889999999999999999977 9999999999999999999999
Q ss_pred eecccceec--CCCCCcc---ccccccCccCccCccccCCC----------c-cCCccchHHHHHHHHHHHh-CCCCCcc
Q 039533 783 GDFGLARIL--SPDHTQT---SSFSVKGSLGYIAPEYGVGC----------E-VSTNGDVYSYGILLLELVI-GKKPIDI 845 (949)
Q Consensus 783 ~DfG~a~~~--~~~~~~~---~~~~~~gt~~y~aPE~~~~~----------~-~~~~sDiwSlGvvl~ellt-g~~Pf~~ 845 (949)
+||..-+.. +.+.... .......-..|.|||.+... . .+++.||||+||++.|+++ |++||+-
T Consensus 162 tDFAsFKPtYLPeDNPadf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~L 241 (1431)
T KOG1240|consen 162 TDFASFKPTYLPEDNPADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTL 241 (1431)
T ss_pred hcccccCCccCCCCCcccceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccH
Confidence 999876543 2222111 11122344679999975431 1 5678999999999999998 7888852
Q ss_pred ccccCchhhhhccccCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHH
Q 039533 846 MFEGDINLHNFGRKALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVV 925 (949)
Q Consensus 846 ~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~ 925 (949)
. .+..+.+.. ......+++ .++ ...+..++..|++.||++|-+|++++
T Consensus 242 S-----QL~aYr~~~-~~~~e~~Le------------------------~Ie--d~~~Rnlil~Mi~rdPs~RlSAedyL 289 (1431)
T KOG1240|consen 242 S-----QLLAYRSGN-ADDPEQLLE------------------------KIE--DVSLRNLILSMIQRDPSKRLSAEDYL 289 (1431)
T ss_pred H-----HHHhHhccC-ccCHHHHHH------------------------hCc--CccHHHHHHHHHccCchhccCHHHHH
Confidence 2 111111100 000111110 000 12467899999999999999999999
Q ss_pred HHHHH
Q 039533 926 HELQS 930 (949)
Q Consensus 926 ~~L~~ 930 (949)
+.-..
T Consensus 290 ~~yrG 294 (1431)
T KOG1240|consen 290 QKYRG 294 (1431)
T ss_pred Hhhhc
Confidence 87443
No 433
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.79 E-value=7.4e-19 Score=177.13 Aligned_cols=141 Identities=17% Similarity=0.099 Sum_probs=110.8
Q ss_pred CCeeeeecCceEEEEEEcCCCEEEEEEEEecCCCcc--------------------------hHHHHHHHHHHHhcCCCc
Q 039533 631 ANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHGA--------------------------SRSFIAECKALKSIRHRN 684 (949)
Q Consensus 631 ~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~--------------------------~~~~~~E~~~l~~l~h~n 684 (949)
...||+|++|.||+|++. +|+.||||+++...... ...+.+|.+.+.++.|++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~-~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~ 80 (190)
T cd05145 2 NGCISTGKEANVYHARTG-DGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAG 80 (190)
T ss_pred CceeecCCCcEEEEEEcC-CCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCC
Confidence 578999999999999987 89999999998543210 112457899999999998
Q ss_pred ceeEEeeeecccccCCccceeEeeeccCCChhhh-cCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhh-CCCCCe
Q 039533 685 LVKVLTACLGADYRGNDFKASVYEFMHYGSLEEW-LHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHH-DCQPVT 762 (949)
Q Consensus 685 iv~~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~-l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~-~~~~~i 762 (949)
+.....+... ..++||||++++++... +. ...++..++..++.|++.++.++|+ . ||
T Consensus 81 i~~p~~~~~~-------~~~lVmE~~~g~~~~~~~l~-----------~~~~~~~~~~~i~~~l~~~l~~lH~~~---gi 139 (190)
T cd05145 81 VPVPEPILLK-------KNVLVMEFIGDDGSPAPRLK-----------DVPLEEEEAEELYEQVVEQMRRLYQEA---GL 139 (190)
T ss_pred CCCceEEEec-------CCEEEEEEecCCCchhhhhh-----------hccCCHHHHHHHHHHHHHHHHHHHHhC---CE
Confidence 7544333211 24899999998755333 32 2346778899999999999999998 6 99
Q ss_pred EecCCCCCCeeecCCCceEEeecccceecCCC
Q 039533 763 AHCDLKPSNVLLDDYMTARVGDFGLARILSPD 794 (949)
Q Consensus 763 vHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~ 794 (949)
+||||||+||+++ ++.++|+|||+|+.....
T Consensus 140 vHrDlkP~NIll~-~~~~~liDFG~a~~~~~~ 170 (190)
T cd05145 140 VHGDLSEYNILYH-DGKPYIIDVSQAVELDHP 170 (190)
T ss_pred ecCCCChhhEEEE-CCCEEEEEcccceecCCC
Confidence 9999999999999 789999999999876543
No 434
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.79 E-value=1.3e-19 Score=188.39 Aligned_cols=241 Identities=19% Similarity=0.212 Sum_probs=149.8
Q ss_pred CCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCCc---chHHHHHHHHHHHhcCC----------CcceeEEeeeecc
Q 039533 629 SSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHG---ASRSFIAECKALKSIRH----------RNLVKVLTACLGA 695 (949)
Q Consensus 629 ~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h----------~niv~~~~~~~~~ 695 (949)
...+.||.|+++.||.+++..+++.+|||++...... ..+++.+|.-....+.+ -.++-.++.....
T Consensus 15 ~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~i~ 94 (288)
T PF14531_consen 15 VRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLRIP 94 (288)
T ss_dssp EEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEEET
T ss_pred EEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEEEc
Confidence 3457899999999999999999999999999744422 23566666655544322 1122111111100
Q ss_pred c----c---cCCc-----cceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeE
Q 039533 696 D----Y---RGND-----FKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTA 763 (949)
Q Consensus 696 ~----~---~~~~-----~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~iv 763 (949)
. + .+.. ..+++|+-+ .++|.+++.-..... .....+....++.+..|+++.+++||+. |++
T Consensus 95 ~~~~~~~~~~~~~~~~v~n~~~l~P~~-~~dL~~~~~~l~~~~---~~~~~l~~~arl~lT~Q~I~lvA~Lh~~---GlV 167 (288)
T PF14531_consen 95 GKPPFFERGPGQSIYWVLNRFLLMPRA-QGDLQDLVEALFSRA---QTHSPLAFAARLSLTVQMIRLVANLHSY---GLV 167 (288)
T ss_dssp TS-SEEEECETTEEEEEESEEEEEE---SEEHHHHHHHHHHHT---TTSHHHHHHHHHHHHHHHHHHHHHHHHT---TEE
T ss_pred CCCcceecCCCCccceeehhhhccchh-hhcHHHHHHHHhhcc---cccchhHHHHHHHHHHHHHHHHHHHhhc---ceE
Confidence 0 0 0001 235677777 458888764111100 0122345566778889999999999988 999
Q ss_pred ecCCCCCCeeecCCCceEEeecccceecCCCCCccccccccCccCccCccccCC--------CccCCccchHHHHHHHHH
Q 039533 764 HCDLKPSNVLLDDYMTARVGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVG--------CEVSTNGDVYSYGILLLE 835 (949)
Q Consensus 764 HrDlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~~sDiwSlGvvl~e 835 (949)
|+||||+|++++++|.++|+||+.....+..... ...+..|.|||.... ..++.+.|.|++|+++|.
T Consensus 168 Hgdi~~~nfll~~~G~v~Lg~F~~~~r~g~~~~~-----~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~ 242 (288)
T PF14531_consen 168 HGDIKPENFLLDQDGGVFLGDFSSLVRAGTRYRC-----SEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYS 242 (288)
T ss_dssp EST-SGGGEEE-TTS-EEE--GGGEEETTEEEEG-----GGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHH
T ss_pred ecccceeeEEEcCCCCEEEcChHHHeecCceeec-----cCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHH
Confidence 9999999999999999999999988765432221 225678999997533 257889999999999999
Q ss_pred HHhCCCCCccccccCchhhhhccccCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCC
Q 039533 836 LVIGKKPIDIMFEGDINLHNFGRKALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELP 915 (949)
Q Consensus 836 lltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP 915 (949)
|++|..||+.......... .+..+.+.++.+.+++..+++++|
T Consensus 243 lWC~~lPf~~~~~~~~~~~-------------------------------------~f~~C~~~Pe~v~~LI~~lL~~~~ 285 (288)
T PF14531_consen 243 LWCGRLPFGLSSPEADPEW-------------------------------------DFSRCRDMPEPVQFLIRGLLQRNP 285 (288)
T ss_dssp HHHSS-STCCCGGGSTSGG-------------------------------------GGTTSS---HHHHHHHHHHT-SSG
T ss_pred HHHccCCCCCCCccccccc-------------------------------------cchhcCCcCHHHHHHHHHHccCCc
Confidence 9999999974422211000 111222557789999999999999
Q ss_pred CCC
Q 039533 916 QDR 918 (949)
Q Consensus 916 ~~R 918 (949)
++|
T Consensus 286 ~~R 288 (288)
T PF14531_consen 286 EDR 288 (288)
T ss_dssp GGS
T ss_pred ccC
Confidence 988
No 435
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=99.79 E-value=2.9e-19 Score=183.74 Aligned_cols=203 Identities=21% Similarity=0.203 Sum_probs=139.7
Q ss_pred CCCcceeEEeeeeccc----------------------ccCCccceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHH
Q 039533 681 RHRNLVKVLTACLGAD----------------------YRGNDFKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLL 738 (949)
Q Consensus 681 ~h~niv~~~~~~~~~~----------------------~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~ 738 (949)
+|||||++.++|.+.- +......|+||..++. +|.+|+. ....+..
T Consensus 274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~~-tLr~yl~-----------~~~~s~r 341 (598)
T KOG4158|consen 274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYRQ-TLREYLW-----------TRHRSYR 341 (598)
T ss_pred CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcchh-hHHHHHh-----------cCCCchH
Confidence 5999999998875431 1223456888887764 8999885 2345667
Q ss_pred HHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeec--CCC--ceEEeecccceecCCCC---C-ccccccccCccCcc
Q 039533 739 QRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLD--DYM--TARVGDFGLARILSPDH---T-QTSSFSVKGSLGYI 810 (949)
Q Consensus 739 ~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~--~~~--~~kl~DfG~a~~~~~~~---~-~~~~~~~~gt~~y~ 810 (949)
...-++.|+++|+.|||.+ ||.|||+|++|||+. +|+ .++|+|||++-...... . ........|...-|
T Consensus 342 ~~~~~laQlLEav~hL~~h---gvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lm 418 (598)
T KOG4158|consen 342 TGRVILAQLLEAVTHLHKH---GVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLM 418 (598)
T ss_pred HHHHHHHHHHHHHHHHHHc---cchhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCcceec
Confidence 7888999999999999977 999999999999993 443 57899999985432211 1 11111234777899
Q ss_pred CccccCCCc------cCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhccccCCCchhhhcccCCCCCchhhhhhh
Q 039533 811 APEYGVGCE------VSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKALPDDVMDIVDSSLLPDDEDLILTG 884 (949)
Q Consensus 811 aPE~~~~~~------~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~ 884 (949)
|||+....+ --.|+|.|+.|.+.||+++..-||..-.+...+... +.+ ..+.
T Consensus 419 APEi~ta~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L~~r~-----Yqe-------~qLP---------- 476 (598)
T KOG4158|consen 419 APEIATAVPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLLDTRT-----YQE-------SQLP---------- 476 (598)
T ss_pred chhhhhcCCCCceeeccchhhhhhhhhhHHHHhccCCcccccchheechhh-----hhh-------hhCC----------
Confidence 999866421 236899999999999999999999531111111111 000 0111
Q ss_pred chhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHH
Q 039533 885 NQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHELQ 929 (949)
Q Consensus 885 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~ 929 (949)
..++.++..+.+++...++.||.+|++..-...+|.
T Consensus 477 ---------alp~~vpp~~rqlV~~lL~r~pskRvsp~iAANvl~ 512 (598)
T KOG4158|consen 477 ---------ALPSRVPPVARQLVFDLLKRDPSKRVSPNIAANVLN 512 (598)
T ss_pred ---------CCcccCChHHHHHHHHHhcCCccccCCccHHHhHHH
Confidence 112355677889999999999999999876665553
No 436
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.79 E-value=8.1e-21 Score=173.21 Aligned_cols=166 Identities=34% Similarity=0.580 Sum_probs=127.4
Q ss_pred CCCCCcccEEEeecceecccCCCcccccCCCCEEecCCcccccccCcccccccccceeecccccccccCCCCCCCCCCCc
Q 039533 314 IGNFVNLQRLDMWNNQLSGTIPPAIGELQNLKILGLNRNKLSGNIPPSIGNLKMLLNLFLNDNFLEVSIPSSLGQCESLI 393 (949)
Q Consensus 314 ~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 393 (949)
+.++.+.+.|.||+|+++ .+|+.+..+.+|+.|++++|+|+ .+|.+++.+++|+.|+++-|++. ..|..|+.++.|+
T Consensus 29 Lf~~s~ITrLtLSHNKl~-~vppnia~l~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~-~lprgfgs~p~le 105 (264)
T KOG0617|consen 29 LFNMSNITRLTLSHNKLT-VVPPNIAELKNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLN-ILPRGFGSFPALE 105 (264)
T ss_pred ccchhhhhhhhcccCcee-ecCCcHHHhhhhhhhhcccchhh-hcChhhhhchhhhheecchhhhh-cCccccCCCchhh
Confidence 345566667777777776 66666777777777777777776 66777777777777777777776 6777777777788
Q ss_pred EEEeeCcccc-CCCCCcccCCcccceeeccCCCccCCCCccccccccccceeeeccccccccCCcccccccchhhcccCc
Q 039533 394 EINLSNNNLS-GTIPPQFFSLSSLSISLDWSRNKLTGSLPIEVGKLKILEFLYVYENRLEGEIPSTFGNCIRLEQLGMGG 472 (949)
Q Consensus 394 ~L~l~~N~l~-~~~p~~~~~l~~l~~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~ 472 (949)
.|||.+|++. ..+|..|+.+..+ ..|+|+.|.+. .+|..++++++|+.|.+..|.+- .+|.+++.+++|++|.+.+
T Consensus 106 vldltynnl~e~~lpgnff~m~tl-ralyl~dndfe-~lp~dvg~lt~lqil~lrdndll-~lpkeig~lt~lrelhiqg 182 (264)
T KOG0617|consen 106 VLDLTYNNLNENSLPGNFFYMTTL-RALYLGDNDFE-ILPPDVGKLTNLQILSLRDNDLL-SLPKEIGDLTRLRELHIQG 182 (264)
T ss_pred hhhccccccccccCCcchhHHHHH-HHHHhcCCCcc-cCChhhhhhcceeEEeeccCchh-hCcHHHHHHHHHHHHhccc
Confidence 8888877775 4578888888877 67888888887 78888888888888888888888 7888888888888888888
Q ss_pred cccccccCCCcCCC
Q 039533 473 NLFQGPISSSLGSL 486 (949)
Q Consensus 473 N~l~~~~~~~~~~l 486 (949)
|+++ .+|..++++
T Consensus 183 nrl~-vlppel~~l 195 (264)
T KOG0617|consen 183 NRLT-VLPPELANL 195 (264)
T ss_pred ceee-ecChhhhhh
Confidence 8888 666665553
No 437
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.78 E-value=1.7e-18 Score=170.43 Aligned_cols=186 Identities=16% Similarity=0.044 Sum_probs=139.3
Q ss_pred CCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCCc----chHHHHHHHHHHHhcC-CCcceeEEeeeecccccCCccc
Q 039533 629 SSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHG----ASRSFIAECKALKSIR-HRNLVKVLTACLGADYRGNDFK 703 (949)
Q Consensus 629 ~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~----~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~~~~ 703 (949)
.+...|++|+||+||.+.. .+.+++.+.+.....- ....+.+|+++++++. |+++++++++ + ..
T Consensus 5 ~~~~~l~~~~f~~v~~~~~--~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~-----~~ 73 (218)
T PRK12274 5 AVNEPLKSDTFGRILLVRG--GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----D-----GR 73 (218)
T ss_pred ccceeecCCCcceEEEeec--CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----c-----CE
Confidence 4568999999999997776 5788887777533221 1125789999999995 5889999876 1 46
Q ss_pred eeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCC-CCCCeeecCCCceEE
Q 039533 704 ASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDL-KPSNVLLDDYMTARV 782 (949)
Q Consensus 704 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDl-kp~NIll~~~~~~kl 782 (949)
+++|||++|.+|.+.... ....++.|++++++++|++ ||+|||| ||+||+++.++.++|
T Consensus 74 ~lvmeyI~G~~L~~~~~~-----------------~~~~~~~qi~~~L~~lH~~---GIvHrDL~kp~NILv~~~g~i~L 133 (218)
T PRK12274 74 HLDRSYLAGAAMYQRPPR-----------------GDLAYFRAARRLLQQLHRC---GVAHNDLAKEANWLVQEDGSPAV 133 (218)
T ss_pred EEEEeeecCccHHhhhhh-----------------hhHHHHHHHHHHHHHHHHC---cCccCCCCCcceEEEcCCCCEEE
Confidence 899999999998654320 1134788999999999987 9999999 799999999999999
Q ss_pred eecccceecCCCCCc----cc-------cccccCccCccCccccCCC-ccC-CccchHHHHHHHHHHHhCCCCCcc
Q 039533 783 GDFGLARILSPDHTQ----TS-------SFSVKGSLGYIAPEYGVGC-EVS-TNGDVYSYGILLLELVIGKKPIDI 845 (949)
Q Consensus 783 ~DfG~a~~~~~~~~~----~~-------~~~~~gt~~y~aPE~~~~~-~~~-~~sDiwSlGvvl~elltg~~Pf~~ 845 (949)
+|||+|....+.... .. ......++.|++|+...-- ..+ .+.+.++-|.-+|.++|+..|+-.
T Consensus 134 IDFG~A~~~~~~~~~~r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~ 209 (218)
T PRK12274 134 IDFQLAVRGNPRARWMRLLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHWE 209 (218)
T ss_pred EECCCceecCCcchHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCccc
Confidence 999999865543321 00 1112357777888753322 233 567999999999999999998643
No 438
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.77 E-value=1.6e-18 Score=204.25 Aligned_cols=201 Identities=19% Similarity=0.216 Sum_probs=158.3
Q ss_pred HHHHHhcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCCcchHHHHHHHHHHHhcC---CCcceeEEeeeeccc
Q 039533 620 DLYNATSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHGASRSFIAECKALKSIR---HRNLVKVLTACLGAD 696 (949)
Q Consensus 620 ~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~~~~~~~~~~ 696 (949)
+.+.....|.|.+.+|+|+||+||+|.... |+.||+|+-+... ..+|.--.+++.+++ -+.|+++..++...+
T Consensus 692 ~~~~~~~~~~I~~e~G~g~y~~vy~a~~~~-~~~~alK~e~P~~---~WEfYI~~q~~~RLk~~~~~~~~~~~~a~~~~~ 767 (974)
T KOG1166|consen 692 EFEVGGEKFCISKEIGEGSYGSVYVATHSN-GKLVALKVEKPPN---PWEFYICLQVMERLKPQMLPSIMHISSAHVFQN 767 (974)
T ss_pred eeeecceeEEEEeeeccccceEEEEeecCC-CcEEEEEeecCCC---ceeeeehHHHHHhhchhhhcchHHHHHHHccCC
Confidence 334455678889999999999999999985 9999999976443 233333344455554 234555544433333
Q ss_pred ccCCccceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeec-
Q 039533 697 YRGNDFKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLD- 775 (949)
Q Consensus 697 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~- 775 (949)
..++|+||.+.|+|.+++. ..+.+++.-++.++.|+++.+++||.. +||||||||+|+|+.
T Consensus 768 -----~S~lv~ey~~~Gtlld~~N----------~~~~m~e~lv~~~~~qml~ive~lH~~---~IIHgDiKPDNfll~~ 829 (974)
T KOG1166|consen 768 -----ASVLVSEYSPYGTLLDLIN----------TNKVMDEYLVMFFSCQMLRIVEHLHAM---GIIHGDIKPDNFLLRR 829 (974)
T ss_pred -----cceeeeeccccccHHHhhc----------cCCCCCchhhhHHHHHHHHHHHHHHhc---ceecccCCcceeEeec
Confidence 6789999999999999997 346688999999999999999999977 999999999999994
Q ss_pred ------CCCceEEeecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCC
Q 039533 776 ------DYMTARVGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKP 842 (949)
Q Consensus 776 ------~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~P 842 (949)
+..-++|+|||.+..+..-........+++|-.+-.+|+..|..+++.+|.|.++.+++-|+.|++-
T Consensus 830 ~~~~~~~~~~l~lIDfG~siDm~lfp~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y~ 902 (974)
T KOG1166|consen 830 EICADSDSKGLYLIDFGRSIDMKLFPDGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKYM 902 (974)
T ss_pred ccCCCCcccceEEEecccceeeeEcCCCcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHHH
Confidence 3346899999999766433333333356789999999999999999999999999999999999863
No 439
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.76 E-value=1.2e-20 Score=172.08 Aligned_cols=157 Identities=32% Similarity=0.474 Sum_probs=113.5
Q ss_pred ccccCCCCEEecCCcccccccCcccccccccceeecccccccccCCCCCCCCCCCcEEEeeCccccCCCCCcccCCcccc
Q 039533 338 IGELQNLKILGLNRNKLSGNIPPSIGNLKMLLNLFLNDNFLEVSIPSSLGQCESLIEINLSNNNLSGTIPPQFFSLSSLS 417 (949)
Q Consensus 338 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~l~ 417 (949)
+.++.+++.|.||+|+++ .+|+.+..+.+|+.|++++|+|+ .+|..++.+++|+.|+++-|++. .+|..|++++.+
T Consensus 29 Lf~~s~ITrLtLSHNKl~-~vppnia~l~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~-~lprgfgs~p~l- 104 (264)
T KOG0617|consen 29 LFNMSNITRLTLSHNKLT-VVPPNIAELKNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLN-ILPRGFGSFPAL- 104 (264)
T ss_pred ccchhhhhhhhcccCcee-ecCCcHHHhhhhhhhhcccchhh-hcChhhhhchhhhheecchhhhh-cCccccCCCchh-
Confidence 345678888999999998 77888999999999999999998 68888889999999999988887 777777777777
Q ss_pred eeeccCCCccCC-CCccccccccccceeeeccccccccCCcccccccchhhcccCccccccccCCCcCCCCCCCEEECCC
Q 039533 418 ISLDWSRNKLTG-SLPIEVGKLKILEFLYVYENRLEGEIPSTFGNCIRLEQLGMGGNLFQGPISSSLGSLRGLRVLDLSQ 496 (949)
Q Consensus 418 ~~L~ls~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~ 496 (949)
+.|||++|++.. .+|..|..++.|+.|+|+.|.+. .+|+.++++++|+.|.+.+|.+- ..|..++.+..|+.|.+.+
T Consensus 105 evldltynnl~e~~lpgnff~m~tlralyl~dndfe-~lp~dvg~lt~lqil~lrdndll-~lpkeig~lt~lrelhiqg 182 (264)
T KOG0617|consen 105 EVLDLTYNNLNENSLPGNFFYMTTLRALYLGDNDFE-ILPPDVGKLTNLQILSLRDNDLL-SLPKEIGDLTRLRELHIQG 182 (264)
T ss_pred hhhhccccccccccCCcchhHHHHHHHHHhcCCCcc-cCChhhhhhcceeEEeeccCchh-hCcHHHHHHHHHHHHhccc
Confidence 667777777764 35555555666666666666665 55555666666666666655555 4555555555555555555
Q ss_pred CcCC
Q 039533 497 NNLS 500 (949)
Q Consensus 497 N~l~ 500 (949)
|+++
T Consensus 183 nrl~ 186 (264)
T KOG0617|consen 183 NRLT 186 (264)
T ss_pred ceee
Confidence 5555
No 440
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=99.75 E-value=2.5e-18 Score=189.96 Aligned_cols=218 Identities=25% Similarity=0.396 Sum_probs=160.3
Q ss_pred HHhcCCCcceeEEeeeecccccCCccceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhh
Q 039533 677 LKSIRHRNLVKVLTACLGADYRGNDFKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHH 756 (949)
Q Consensus 677 l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~ 756 (949)
|+.+.|.|+.+++|.+.+.. ..++|++|+..|+|.+.+.. ....+++.....+.++++.||+|+|+
T Consensus 1 l~~l~h~n~~~f~g~~~~~~-----~~~~i~~~c~rGsl~D~i~~---------~~~~~d~~F~~s~~rdi~~Gl~ylh~ 66 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASVDGP-----EMIVIWEYCSRGSLLDILSN---------EDIKLDYFFILSFIRDISKGLAYLHN 66 (484)
T ss_pred CcccchhhhhhheeeEecCC-----ceEEEEeeecCccHHhHHhc---------cccCccHHHHHHHHHHHHHHHHHHhc
Confidence 35678999999999998764 78999999999999999972 34668999999999999999999997
Q ss_pred CCCCCeEecCCCCCCeeecCCCceEEeecccceecCCCCCccccccccCccCccCccccCCCc-------cCCccchHHH
Q 039533 757 DCQPVTAHCDLKPSNVLLDDYMTARVGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCE-------VSTNGDVYSY 829 (949)
Q Consensus 757 ~~~~~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-------~~~~sDiwSl 829 (949)
. . ...|+.++++|.++|..+.+|++|||+.................-..-|.|||.+.+.. .+.+.|||||
T Consensus 67 s-~-i~~hg~l~s~nClvd~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~ 144 (484)
T KOG1023|consen 67 S-P-IGYHGALKSSNCLVDSRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSF 144 (484)
T ss_pred C-c-ceeeeeeccccceeeeeEEEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCeehH
Confidence 6 2 23999999999999999999999999988764311111111222456799999977631 4678999999
Q ss_pred HHHHHHHHhCCCCCccccccCc--hhhhhccccCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHh
Q 039533 830 GILLLELVIGKKPIDIMFEGDI--NLHNFGRKALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIG 907 (949)
Q Consensus 830 Gvvl~elltg~~Pf~~~~~~~~--~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~ 907 (949)
|++++|+++.+.||+....... ........ . -.+...++. ....+.++.+..++
T Consensus 145 ~ii~~ei~~r~~~~~~~~~~~~~~eii~~~~~----~----~~~~~rP~i----------------~~~~e~~~~l~~l~ 200 (484)
T KOG1023|consen 145 GIIMYEILFRSGPFDLRNLVEDPDEIILRVKK----G----GSNPFRPSI----------------ELLNELPPELLLLV 200 (484)
T ss_pred HHHHHHHHhccCccccccccCChHHHHHHHHh----c----CCCCcCcch----------------hhhhhcchHHHHHH
Confidence 9999999999999975422211 11111100 0 000011111 00113445788999
Q ss_pred hccccCCCCCCCCHHHHHHHHHHhHHh
Q 039533 908 VACSMELPQDRTNMTNVVHELQSIKNI 934 (949)
Q Consensus 908 ~~cl~~dP~~RPs~~ev~~~L~~i~~~ 934 (949)
..||..+|++||++++|-..++.+...
T Consensus 201 ~~cw~e~P~~rPs~~~i~~~~~~~~~~ 227 (484)
T KOG1023|consen 201 ARCWEEIPEKRPSIEQIRSKLLTINKG 227 (484)
T ss_pred HHhcccChhhCccHHHHHhhhhhhccc
Confidence 999999999999999999998877553
No 441
>PRK10345 hypothetical protein; Provisional
Probab=99.74 E-value=1.6e-17 Score=167.76 Aligned_cols=140 Identities=16% Similarity=0.194 Sum_probs=107.1
Q ss_pred CCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCCcchHHHHHHHHHHHhc-----CCCcceeEEeeeecccccCCcc
Q 039533 628 FSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHGASRSFIAECKALKSI-----RHRNLVKVLTACLGADYRGNDF 702 (949)
Q Consensus 628 y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-----~h~niv~~~~~~~~~~~~~~~~ 702 (949)
+.-.+.||+|+||.||. +..++.. +||+.........+.+.+|+.+++++ .||||++++|++.... +...
T Consensus 4 L~~~~~LG~G~~~~Vy~--hp~~~~k-~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~--g~g~ 78 (210)
T PRK10345 4 LSEQSPLGTGRHRKCYA--HPEDAQR-CIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDC--GTGY 78 (210)
T ss_pred cCCcceecCCCceEEEE--CCCCcCe-EEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCC--CCeE
Confidence 34568999999999995 5545555 69998765555567899999999999 5799999999986542 1123
Q ss_pred -ceeEeee--ccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHH-HHHhhCCCCCeEecCCCCCCeeecC--
Q 039533 703 -KASVYEF--MHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYAL-NYLHHDCQPVTAHCDLKPSNVLLDD-- 776 (949)
Q Consensus 703 -~~lv~e~--~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL-~~LH~~~~~~ivHrDlkp~NIll~~-- 776 (949)
..+|+|| +.+++|.+++.. ..+++. ..++.|++.++ +|||++ +|+||||||+||+++.
T Consensus 79 v~~~I~e~~G~~~~tL~~~l~~-----------~~~~e~--~~~~~~~L~~l~~yLh~~---~IvhrDlKp~NILl~~~~ 142 (210)
T PRK10345 79 VYDVIADFDGKPSITLTEFAEQ-----------CRYEED--VAQLRQLLKKLKRYLLDN---RIVTMELKPQNILCQRIS 142 (210)
T ss_pred EEEEEecCCCCcchhHHHHHHc-----------ccccHh--HHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEeccC
Confidence 3478999 567999999962 124444 35678888887 999987 8999999999999973
Q ss_pred --CCceEEeecccc
Q 039533 777 --YMTARVGDFGLA 788 (949)
Q Consensus 777 --~~~~kl~DfG~a 788 (949)
++.++|+||+.+
T Consensus 143 ~~~~~~~LiDg~G~ 156 (210)
T PRK10345 143 ESEVIPVVCDNIGE 156 (210)
T ss_pred CCCCcEEEEECCCC
Confidence 348999995444
No 442
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.73 E-value=4.4e-20 Score=203.81 Aligned_cols=134 Identities=23% Similarity=0.267 Sum_probs=62.0
Q ss_pred EEcCCCCCCc-cccCCCCCCCCCceeeccCceecc----ccCCcccCcccCcEEeeccccccCcCCCCCCCCccceeecC
Q 039533 70 LDLRSLKLAG-SVSHFIGNLSFLKQLYLQVNSFTH----EIPSEIGGLRRLKVLALNNNSICGEIPTNISRCSTLIPIHP 144 (949)
Q Consensus 70 l~l~~~~l~g-~~~~~l~~l~~L~~L~L~~n~l~~----~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l 144 (949)
|+|.++.+++ .....+..+..|++|+|+++.++. .++..+...++|++|+++++.+.+ .+..+
T Consensus 3 l~L~~~~l~~~~~~~~~~~l~~L~~l~l~~~~l~~~~~~~i~~~l~~~~~l~~l~l~~~~~~~-~~~~~----------- 70 (319)
T cd00116 3 LSLKGELLKTERATELLPKLLCLQVLRLEGNTLGEEAAKALASALRPQPSLKELCLSLNETGR-IPRGL----------- 70 (319)
T ss_pred cccccCcccccchHHHHHHHhhccEEeecCCCCcHHHHHHHHHHHhhCCCceEEeccccccCC-cchHH-----------
Confidence 4455555542 223334444445555555555532 133344444555555555554431 01000
Q ss_pred CCccccccccccccCCCCCcEEECCCCCCCCCCCCCcCCCCC---ccEEeccccccCC----CCCCcccCC-Cccccccc
Q 039533 145 QNNQLVGKILSRFSSLSKTEILNLGSNHLTGSIPSSLGNLSS---IHTISLAYNNLDG----TIPNSFGWF-ENLVFLSL 216 (949)
Q Consensus 145 ~~n~l~~~~~~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~---L~~L~L~~N~l~~----~~p~~~~~l-~~L~~L~L 216 (949)
..++..|..+++|+.|+|++|.+.+..+..+..+.+ |++|++++|++++ .+...+..+ ++|+.|+|
T Consensus 71 ------~~~~~~l~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~ls~~~~~~~~~~~l~~~l~~~~~~L~~L~L 144 (319)
T cd00116 71 ------QSLLQGLTKGCGLQELDLSDNALGPDGCGVLESLLRSSSLQELKLNNNGLGDRGLRLLAKGLKDLPPALEKLVL 144 (319)
T ss_pred ------HHHHHHHHhcCceeEEEccCCCCChhHHHHHHHHhccCcccEEEeeCCccchHHHHHHHHHHHhCCCCceEEEc
Confidence 122344555566666666666665444444444443 6666666666552 112223333 44555555
Q ss_pred cCccc
Q 039533 217 AANNL 221 (949)
Q Consensus 217 s~N~l 221 (949)
++|.+
T Consensus 145 ~~n~l 149 (319)
T cd00116 145 GRNRL 149 (319)
T ss_pred CCCcC
Confidence 54444
No 443
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.73 E-value=2.6e-20 Score=205.57 Aligned_cols=156 Identities=22% Similarity=0.251 Sum_probs=100.7
Q ss_pred cEEEEEcCCCCCCcc----ccCCCCCCCCCceeeccCceecc------ccCCcccCcccCcEEeeccccccCcCCCCCCC
Q 039533 66 RVTLLDLRSLKLAGS----VSHFIGNLSFLKQLYLQVNSFTH------EIPSEIGGLRRLKVLALNNNSICGEIPTNISR 135 (949)
Q Consensus 66 ~v~~l~l~~~~l~g~----~~~~l~~l~~L~~L~L~~n~l~~------~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 135 (949)
.++.++++++.++.. ++..+...+.|++|+++++.+.+ .++..+..+++|++|+|++|.+.+..+..+..
T Consensus 24 ~L~~l~l~~~~l~~~~~~~i~~~l~~~~~l~~l~l~~~~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~~~~~~~~~ 103 (319)
T cd00116 24 CLQVLRLEGNTLGEEAAKALASALRPQPSLKELCLSLNETGRIPRGLQSLLQGLTKGCGLQELDLSDNALGPDGCGVLES 103 (319)
T ss_pred hccEEeecCCCCcHHHHHHHHHHHhhCCCceEEeccccccCCcchHHHHHHHHHHhcCceeEEEccCCCCChhHHHHHHH
Confidence 378899999998553 56677888999999999998872 34556778889999999999998666655555
Q ss_pred Ccc---ceeecCCCccccc----cccccccCC-CCCcEEECCCCCCCCC----CCCCcCCCCCccEEeccccccCCC---
Q 039533 136 CST---LIPIHPQNNQLVG----KILSRFSSL-SKTEILNLGSNHLTGS----IPSSLGNLSSIHTISLAYNNLDGT--- 200 (949)
Q Consensus 136 l~~---L~~L~l~~n~l~~----~~~~~~~~L-~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~--- 200 (949)
+.+ |++|++++|++.+ .+...+..+ ++|+.|+|++|.+++. ++..+..+.+|++|+|++|.+++.
T Consensus 104 l~~~~~L~~L~ls~~~~~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~ 183 (319)
T cd00116 104 LLRSSSLQELKLNNNGLGDRGLRLLAKGLKDLPPALEKLVLGRNRLEGASCEALAKALRANRDLKELNLANNGIGDAGIR 183 (319)
T ss_pred HhccCcccEEEeeCCccchHHHHHHHHHHHhCCCCceEEEcCCCcCCchHHHHHHHHHHhCCCcCEEECcCCCCchHHHH
Confidence 544 7777777777653 223344555 6667777777766632 223344555666666666666531
Q ss_pred -CCCcccCCCccccccccCccc
Q 039533 201 -IPNSFGWFENLVFLSLAANNL 221 (949)
Q Consensus 201 -~p~~~~~l~~L~~L~Ls~N~l 221 (949)
++..+..+++|++|+|++|.+
T Consensus 184 ~l~~~l~~~~~L~~L~L~~n~i 205 (319)
T cd00116 184 ALAEGLKANCNLEVLDLNNNGL 205 (319)
T ss_pred HHHHHHHhCCCCCEEeccCCcc
Confidence 122233334455555554443
No 444
>smart00090 RIO RIO-like kinase.
Probab=99.72 E-value=5e-17 Score=168.62 Aligned_cols=148 Identities=17% Similarity=0.108 Sum_probs=113.7
Q ss_pred HHhcCCCCCCeeeeecCceEEEEE-EcCCCEEEEEEEEecCCCc------------------------chHHHHHHHHHH
Q 039533 623 NATSGFSSANLVGVGSFGSVYKGI-IDEGRTTIAVKVFNLQHHG------------------------ASRSFIAECKAL 677 (949)
Q Consensus 623 ~~~~~y~~~~~lg~G~~g~Vy~~~-~~~~~~~vavK~~~~~~~~------------------------~~~~~~~E~~~l 677 (949)
.....|.+.+.||+|++|.||+|. +..+|+.||+|+++..... ....+.+|+..+
T Consensus 25 ~~~~~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L 104 (237)
T smart00090 25 NRGILSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNL 104 (237)
T ss_pred hcCchHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHH
Confidence 333458889999999999999998 5568999999999754210 012356899999
Q ss_pred HhcCCC--cceeEEeeeecccccCCccceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHh
Q 039533 678 KSIRHR--NLVKVLTACLGADYRGNDFKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLH 755 (949)
Q Consensus 678 ~~l~h~--niv~~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH 755 (949)
+++.+. .+++++++ . ..++||||++++++..+.. ........++..++.|++.++++||
T Consensus 105 ~~L~~~~i~~p~~~~~----~-----~~~lV~E~~~g~~L~~~~~----------~~~~~~~~~~~~i~~qi~~~l~~LH 165 (237)
T smart00090 105 QRLYEAGVPVPKPIAW----R-----RNVLVMEFIGGDGLPAPRL----------KDVEPEEEEEFELYDDILEEMRKLY 165 (237)
T ss_pred HHHHhcCCCCCeeeEe----c-----CceEEEEEecCCccccccc----------ccCCcchHHHHHHHHHHHHHHHHHH
Confidence 999753 34444432 1 3489999999988876542 1123455667899999999999999
Q ss_pred hCCCCC-eEecCCCCCCeeecCCCceEEeecccceecCC
Q 039533 756 HDCQPV-TAHCDLKPSNVLLDDYMTARVGDFGLARILSP 793 (949)
Q Consensus 756 ~~~~~~-ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~ 793 (949)
++ + |+||||||+||+++ ++.++|+|||.|.....
T Consensus 166 ~~---g~iiH~Dikp~NIli~-~~~i~LiDFg~a~~~~~ 200 (237)
T smart00090 166 KE---GELVHGDLSEYNILVH-DGKVVIIDVSQSVELDH 200 (237)
T ss_pred hc---CCEEeCCCChhhEEEE-CCCEEEEEChhhhccCC
Confidence 77 8 99999999999999 78999999999875443
No 445
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.70 E-value=2.7e-18 Score=188.81 Aligned_cols=187 Identities=26% Similarity=0.261 Sum_probs=151.6
Q ss_pred eeeeecCceEEEEEE---cCCCEEEEEEEEecCCCc--chHHHHHHHHHHHhcC-CCcceeEEeeeecccccCCccceeE
Q 039533 633 LVGVGSFGSVYKGII---DEGRTTIAVKVFNLQHHG--ASRSFIAECKALKSIR-HRNLVKVLTACLGADYRGNDFKASV 706 (949)
Q Consensus 633 ~lg~G~~g~Vy~~~~---~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~~~~~lv 706 (949)
++|+|.||.|+++.- ...+..+|+|+.+..... .......|..++..++ ||.++++...+.... ..+++
T Consensus 1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt~~-----kl~l~ 75 (612)
T KOG0603|consen 1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQTDG-----KLYLI 75 (612)
T ss_pred CCCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeecccc-----chhHh
Confidence 378999999987543 334677899988644321 1125566788888886 999999987755443 78999
Q ss_pred eeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEeecc
Q 039533 707 YEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVGDFG 786 (949)
Q Consensus 707 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~DfG 786 (949)
++|..+|.+...+. ....++......+...++-|++++|+. +|+|||+|++||+++.+|++++.|||
T Consensus 76 ld~~rgg~lft~l~----------~~~~f~~~~~~~~~aelaLald~lh~l---~iiyrd~k~enilld~~Ghi~~tdfg 142 (612)
T KOG0603|consen 76 LDFLRGGDLFTRLS----------KEVMFDELDVAFYLAELALALDHLHKL---GIAYRDYKLENVLLLLEGHIKLTDFG 142 (612)
T ss_pred hhhcccchhhhccc----------cCCchHHHHHHHHHHHHHHHHhhcchh---HHHHhcccccceeecccCccccCCch
Confidence 99999999988886 234567778888999999999999976 99999999999999999999999999
Q ss_pred cceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCcc
Q 039533 787 LARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDI 845 (949)
Q Consensus 787 ~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~ 845 (949)
.++..-..... .||..|||||+.. ....++|.||||++++||+||..||..
T Consensus 143 lske~v~~~~~------cgt~eymApEI~~--gh~~a~D~ws~gvl~felltg~~pf~~ 193 (612)
T KOG0603|consen 143 LSKEAVKEKIA------CGTYEYRAPEIIN--GHLSAADWWSFGVLAFELLTGTLPFGG 193 (612)
T ss_pred hhhHhHhhhhc------ccchhhhhhHhhh--ccCCcccchhhhhhHHHHhhCCCCCch
Confidence 99875443322 4899999999988 567889999999999999999999964
No 446
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=99.69 E-value=9.3e-18 Score=181.12 Aligned_cols=129 Identities=31% Similarity=0.452 Sum_probs=108.5
Q ss_pred cceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceE
Q 039533 702 FKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTAR 781 (949)
Q Consensus 702 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~k 781 (949)
+.+|.|++++..+|.+|+.+.. .....++.....++.|++.|++| + +.+|||+||.||+...+..+|
T Consensus 330 ~lyI~Mn~c~~~tledWl~rr~-------~~e~~s~s~~~~~~~q~~~~~~y---k---~~ihrdlkp~nif~~~d~q~k 396 (516)
T KOG1033|consen 330 YLYIQMNLCEKETLEDWLRRRR-------TGEERSLSLMLDIFKQIAPAVEY---K---GLIHRDLKPSNIFFSDDDQLK 396 (516)
T ss_pred chhhhhhhhhhhhHHHHhhCCC-------cccccchhHHHHHHHhhccchhh---c---cchhhhccccccccccchhhh
Confidence 5789999999999999996321 23346778889999999999999 4 899999999999999999999
Q ss_pred EeecccceecCCCC----CccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHh-CCCCC
Q 039533 782 VGDFGLARILSPDH----TQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVI-GKKPI 843 (949)
Q Consensus 782 l~DfG~a~~~~~~~----~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~ellt-g~~Pf 843 (949)
|.|||+........ .......-+||..||+||.+.+..|+.|+||||+|++++|+++ -..+|
T Consensus 397 IgDFgl~ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~~f~T~~ 463 (516)
T KOG1033|consen 397 IGDFGLVTSQDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLIQFSTQF 463 (516)
T ss_pred hhhhhheeecccCCcccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHHHhccHH
Confidence 99999998776555 1223335569999999999999999999999999999999998 44443
No 447
>PLN03150 hypothetical protein; Provisional
Probab=99.65 E-value=2.7e-16 Score=186.11 Aligned_cols=152 Identities=25% Similarity=0.365 Sum_probs=108.8
Q ss_pred cCCCChhhHHHHHHHHhccCCCCCCCccCccCCCCcc----eeeeeEEeCC--C--CcEEEEEcCCCCCCccccCCCCCC
Q 039533 17 AGTGNETDRVALLEFKSKSTYDPVGVLGTWNESIHFC----KWYGVTCSRR--H--QRVTLLDLRSLKLAGSVSHFIGNL 88 (949)
Q Consensus 17 ~~~~~~~~~~aLl~~k~~~~~~~~~~l~sW~~~~~~C----~w~gv~C~~~--~--~~v~~l~l~~~~l~g~~~~~l~~l 88 (949)
.....+.|..||++||+++. ++.. .+|+. ..|| .|.||+|+.. + .+|+.|+|+++++.|.+|+.++.|
T Consensus 366 ~~~t~~~~~~aL~~~k~~~~-~~~~--~~W~g-~~C~p~~~~w~Gv~C~~~~~~~~~~v~~L~L~~n~L~g~ip~~i~~L 441 (623)
T PLN03150 366 ESKTLLEEVSALQTLKSSLG-LPLR--FGWNG-DPCVPQQHPWSGADCQFDSTKGKWFIDGLGLDNQGLRGFIPNDISKL 441 (623)
T ss_pred ccccCchHHHHHHHHHHhcC-Cccc--CCCCC-CCCCCcccccccceeeccCCCCceEEEEEECCCCCccccCCHHHhCC
Confidence 34456789999999998863 4332 48964 2442 7999999632 2 258889999999988888888888
Q ss_pred CCCceeeccCceeccccCCcccCcccCcEEeeccccccCcCCCCCCCCccceeecCCCccccccccccccCC-CCCcEEE
Q 039533 89 SFLKQLYLQVNSFTHEIPSEIGGLRRLKVLALNNNSICGEIPTNISRCSTLIPIHPQNNQLVGKILSRFSSL-SKTEILN 167 (949)
Q Consensus 89 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~L-~~L~~L~ 167 (949)
++|+.|+|++|+++|.+|..++.+++|+.|+|++|+++|.+|..+++|++|+.|+|++|++++.+|..+..+ .++..++
T Consensus 442 ~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls~N~l~g~iP~~l~~~~~~~~~l~ 521 (623)
T PLN03150 442 RHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGNSLSGRVPAALGGRLLHRASFN 521 (623)
T ss_pred CCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECcCCcccccCChHHhhccccCceEE
Confidence 888888888888888888888888888888888888888888877777666555555555554444444332 2333444
Q ss_pred CCCCC
Q 039533 168 LGSNH 172 (949)
Q Consensus 168 Ls~N~ 172 (949)
+++|.
T Consensus 522 ~~~N~ 526 (623)
T PLN03150 522 FTDNA 526 (623)
T ss_pred ecCCc
Confidence 44443
No 448
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.65 E-value=8.9e-16 Score=156.17 Aligned_cols=146 Identities=20% Similarity=0.132 Sum_probs=112.7
Q ss_pred HHHHHHhcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCCc----------------------chHHHHHHHHH
Q 039533 619 QDLYNATSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHG----------------------ASRSFIAECKA 676 (949)
Q Consensus 619 ~~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~----------------------~~~~~~~E~~~ 676 (949)
+++.....-|.+.+.||+|+||.||+|... +++.||||+++..... .......|+.+
T Consensus 8 ~~~~~~~~~~~~~~~i~~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~ 86 (198)
T cd05144 8 HTLVKRGVVESLGNQIGVGKESDVYLALDP-DGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAA 86 (198)
T ss_pred HHHHHcCchhhcCCccccCcceEEEEEEcC-CCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHH
Confidence 344444445888999999999999999886 7899999997643210 01236778999
Q ss_pred HHhcCCC--cceeEEeeeecccccCCccceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHH
Q 039533 677 LKSIRHR--NLVKVLTACLGADYRGNDFKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYL 754 (949)
Q Consensus 677 l~~l~h~--niv~~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~L 754 (949)
+.++.|+ .+++.++. ...++||||+++++|.+.... .....++.+++.++.++
T Consensus 87 l~~l~~~~i~v~~~~~~---------~~~~lv~e~~~g~~L~~~~~~----------------~~~~~~~~~i~~~l~~l 141 (198)
T cd05144 87 LKALYEEGFPVPKPIDW---------NRHAVVMEYIDGVELYRVRVL----------------EDPEEVLDEILEEIVKA 141 (198)
T ss_pred HHHHHHcCCCCCceeec---------CCceEEEEEeCCcchhhcccc----------------ccHHHHHHHHHHHHHHH
Confidence 9999877 44444432 145899999999998765420 23467899999999999
Q ss_pred hhCCCCCeEecCCCCCCeeecCCCceEEeecccceecCC
Q 039533 755 HHDCQPVTAHCDLKPSNVLLDDYMTARVGDFGLARILSP 793 (949)
Q Consensus 755 H~~~~~~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~ 793 (949)
|+. +|+||||||+||++++++.++|+|||.+.....
T Consensus 142 h~~---gi~H~Dl~p~Nill~~~~~~~liDfg~~~~~~~ 177 (198)
T cd05144 142 YKH---GIIHGDLSEFNILVDDDEKIYIIDWPQMVSTDH 177 (198)
T ss_pred HHC---CCCcCCCCcccEEEcCCCcEEEEECCccccCCC
Confidence 976 999999999999999999999999999965544
No 449
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.64 E-value=1.2e-15 Score=157.36 Aligned_cols=134 Identities=19% Similarity=0.215 Sum_probs=109.1
Q ss_pred CeeeeecCceEEEEEEcCCCEEEEEEEEecCCCc--------chHHHHHHHHHHHhcCCCcceeEEeeeecccccCCccc
Q 039533 632 NLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHG--------ASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFK 703 (949)
Q Consensus 632 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~--------~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 703 (949)
+.||+|++|.||+|.+ .+..|++|+....... ...++.+|++++..+.|++++....++...+ ..
T Consensus 2 ~~l~~G~~~~vy~~~~--~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~-----~~ 74 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF--LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPE-----NF 74 (211)
T ss_pred cccccCceEEEEEEee--CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCC-----CC
Confidence 5799999999999988 4678999986543221 1235778999999999998876666654333 67
Q ss_pred eeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEe
Q 039533 704 ASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVG 783 (949)
Q Consensus 704 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~ 783 (949)
++||||++|++|.+++.. ... ++..++.+++.+|.++|+. +++|||++|+||+++ ++.++++
T Consensus 75 ~lv~e~~~G~~L~~~~~~-------------~~~-~~~~i~~~i~~~l~~lH~~---~i~H~Dl~p~Nil~~-~~~~~li 136 (211)
T PRK14879 75 IIVMEYIEGEPLKDLINS-------------NGM-EELELSREIGRLVGKLHSA---GIIHGDLTTSNMILS-GGKIYLI 136 (211)
T ss_pred EEEEEEeCCcCHHHHHHh-------------ccH-HHHHHHHHHHHHHHHHHhC---CcccCCCCcccEEEE-CCCEEEE
Confidence 899999999999999851 111 7788999999999999977 899999999999999 7899999
Q ss_pred eccccee
Q 039533 784 DFGLARI 790 (949)
Q Consensus 784 DfG~a~~ 790 (949)
|||.+..
T Consensus 137 Df~~a~~ 143 (211)
T PRK14879 137 DFGLAEF 143 (211)
T ss_pred ECCcccC
Confidence 9998864
No 450
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.64 E-value=1.3e-16 Score=183.73 Aligned_cols=168 Identities=27% Similarity=0.364 Sum_probs=121.6
Q ss_pred HhcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCCcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCccc
Q 039533 624 ATSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFK 703 (949)
Q Consensus 624 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 703 (949)
..++|..++.|..|+||.||.++++.+.+.+|+|+-+ +. .+.+- ++.....|.
T Consensus 81 ~e~df~~IklisngAygavylvrh~~trqrfa~kiNk-q~-----lilRn--ilt~a~npf------------------- 133 (1205)
T KOG0606|consen 81 SESDFNTIKLISNGAYGAVYLVRHKETRQRFAMKINK-QN-----LILRN--ILTFAGNPF------------------- 133 (1205)
T ss_pred CccccceeEeeccCCCCceeeeeccccccchhhcccc-cc-----hhhhc--cccccCCcc-------------------
Confidence 3468999999999999999999999888899996532 11 01110 111112222
Q ss_pred eeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEe
Q 039533 704 ASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVG 783 (949)
Q Consensus 704 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~ 783 (949)
.| |+-...++. .+.++.. ++.+++|+|+. +|+|||+||+|.+|+.-|++|++
T Consensus 134 -vv------gDc~tllk~----------~g~lPvd--------mvla~Eylh~y---givhrdlkpdnllIT~mGhiKlT 185 (1205)
T KOG0606|consen 134 -VV------GDCATLLKN----------IGPLPVD--------MVLAVEYLHSY---GIVHRDLKPDNLLITSMGHIKLT 185 (1205)
T ss_pred -ee------chhhhhccc----------CCCCcch--------hhHHhHhhccC---CeecCCCCCCcceeeeccccccc
Confidence 22 333333331 1122222 27899999977 99999999999999999999999
Q ss_pred ecccceecCCCCC-------------ccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccc
Q 039533 784 DFGLARILSPDHT-------------QTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIM 846 (949)
Q Consensus 784 DfG~a~~~~~~~~-------------~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~ 846 (949)
|||+++......+ ......+.||+.|.|||++....|...+|+|++|+++||.+.|..||...
T Consensus 186 DfgLsk~GLms~atnl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGd 261 (1205)
T KOG0606|consen 186 DFGLSKKGLMSLATNLKEGHIEKDTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGD 261 (1205)
T ss_pred chhhhhhhhhhccchhhhcchHHHHHHhhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCC
Confidence 9999976432111 11112457999999999999999999999999999999999999999643
No 451
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.62 E-value=1.9e-15 Score=177.32 Aligned_cols=144 Identities=19% Similarity=0.191 Sum_probs=112.2
Q ss_pred HHHHHHHhcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecC--CC------cchHHHHHHHHHHHhcCCCcceeEE
Q 039533 618 YQDLYNATSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQ--HH------GASRSFIAECKALKSIRHRNLVKVL 689 (949)
Q Consensus 618 ~~~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~--~~------~~~~~~~~E~~~l~~l~h~niv~~~ 689 (949)
+.........|...+.||+|+||.||+|.+.. ..+++|+.... .. ...+++.+|++++++++|++++...
T Consensus 325 ~~~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~--~~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~ 402 (535)
T PRK09605 325 WIKEEEVKRRKIPDHLIGKGAEADIKKGEYLG--RDAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPV 402 (535)
T ss_pred eccccccccccCccceeccCCcEEEEEEeecC--ccceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeE
Confidence 33333444566778999999999999998863 34455443211 11 1124688999999999999998877
Q ss_pred eeeecccccCCccceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCC
Q 039533 690 TACLGADYRGNDFKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKP 769 (949)
Q Consensus 690 ~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp 769 (949)
.++.... ..++||||+++++|.+++. ....++.|+++++.|||+. +++|||+||
T Consensus 403 ~~~~~~~-----~~~lv~E~~~g~~L~~~l~------------------~~~~~~~~i~~~L~~lH~~---giiHrDlkp 456 (535)
T PRK09605 403 IYDVDPE-----EKTIVMEYIGGKDLKDVLE------------------GNPELVRKVGEIVAKLHKA---GIVHGDLTT 456 (535)
T ss_pred EEEEeCC-----CCEEEEEecCCCcHHHHHH------------------HHHHHHHHHHHHHHHHHhC---CCccCCCCh
Confidence 6654433 5689999999999998874 3567999999999999977 999999999
Q ss_pred CCeeecCCCceEEeeccccee
Q 039533 770 SNVLLDDYMTARVGDFGLARI 790 (949)
Q Consensus 770 ~NIll~~~~~~kl~DfG~a~~ 790 (949)
+||++ +++.++|+|||+++.
T Consensus 457 ~NILl-~~~~~~liDFGla~~ 476 (535)
T PRK09605 457 SNFIV-RDDRLYLIDFGLGKY 476 (535)
T ss_pred HHEEE-ECCcEEEEeCccccc
Confidence 99999 577999999999875
No 452
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.61 E-value=3e-15 Score=152.72 Aligned_cols=130 Identities=19% Similarity=0.209 Sum_probs=102.1
Q ss_pred eeeeecCceEEEEEEcCCCEEEEEEEEecCCCc--------chHHHHHHHHHHHhcCCCcceeEEeeeecccccCCccce
Q 039533 633 LVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHG--------ASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFKA 704 (949)
Q Consensus 633 ~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~--------~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 704 (949)
.||+|++|.||+|.+. +..|++|+....... ...++.+|++++..+.|+++.....++...+ ..+
T Consensus 1 ~ig~G~~~~vy~~~~~--~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~-----~~~ 73 (199)
T TIGR03724 1 LIAKGAEAIIYLGDFL--GLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPD-----NKT 73 (199)
T ss_pred CCCCCceEEEEEeecC--CccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECC-----CCE
Confidence 4799999999999964 678999986532211 1256778999999998876554443433222 568
Q ss_pred eEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEee
Q 039533 705 SVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVGD 784 (949)
Q Consensus 705 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~D 784 (949)
+||||++|++|.+++.. .. ..++.+++.+++++|+. +++|||++|+||+++ ++.++++|
T Consensus 74 lv~e~~~g~~l~~~~~~----------~~-------~~~~~~i~~~l~~lH~~---gi~H~Dl~~~Nil~~-~~~~~liD 132 (199)
T TIGR03724 74 IVMEYIEGKPLKDVIEE----------GN-------DELLREIGRLVGKLHKA---GIVHGDLTTSNIIVR-DDKLYLID 132 (199)
T ss_pred EEEEEECCccHHHHHhh----------cH-------HHHHHHHHHHHHHHHHC---CeecCCCCcceEEEE-CCcEEEEE
Confidence 99999999999988751 00 07899999999999977 999999999999999 78999999
Q ss_pred ccccee
Q 039533 785 FGLARI 790 (949)
Q Consensus 785 fG~a~~ 790 (949)
||.+..
T Consensus 133 fg~a~~ 138 (199)
T TIGR03724 133 FGLGKY 138 (199)
T ss_pred CCCCcC
Confidence 999865
No 453
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=99.54 E-value=2.8e-14 Score=143.96 Aligned_cols=137 Identities=19% Similarity=0.169 Sum_probs=98.4
Q ss_pred CCeeeeecCceEEEEEEcCCCEEEEEEEEecCCCcc--hHH----------------------HHHHHHHHHhcCCC--c
Q 039533 631 ANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHGA--SRS----------------------FIAECKALKSIRHR--N 684 (949)
Q Consensus 631 ~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~--~~~----------------------~~~E~~~l~~l~h~--n 684 (949)
.+.||+|+||+||+|.+. +++.||||+++...... ... ...|...+.++.+. .
T Consensus 2 ~~~lg~G~~g~Vy~a~~~-~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~ 80 (187)
T cd05119 2 GGPIGTGKEADVYLALDG-DGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVP 80 (187)
T ss_pred CcccccccceeEEEEECC-CCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCC
Confidence 578999999999999987 78999999987532211 111 13566666666443 2
Q ss_pred ceeEEeeeecccccCCccceeEeeeccCCChhhh-cCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhh-CCCCCe
Q 039533 685 LVKVLTACLGADYRGNDFKASVYEFMHYGSLEEW-LHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHH-DCQPVT 762 (949)
Q Consensus 685 iv~~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~-l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~-~~~~~i 762 (949)
+.+.+++ ...++||||++++++... +.. .... .++..++.+++.++.++|+ . +|
T Consensus 81 ~~~~~~~---------~~~~lv~e~~~g~~~~~~~l~~-----------~~~~-~~~~~~~~~~~~~l~~lh~~~---~i 136 (187)
T cd05119 81 VPKPIDL---------NRHVLVMEFIGGDGIPAPRLKD-----------VRLL-EDPEELYDQILELMRKLYREA---GL 136 (187)
T ss_pred CCceEec---------CCCEEEEEEeCCCCccChhhhh-----------hhhc-ccHHHHHHHHHHHHHHHhhcc---Cc
Confidence 4444433 135899999998654321 110 0001 5678899999999999997 5 89
Q ss_pred EecCCCCCCeeecCCCceEEeecccceecCC
Q 039533 763 AHCDLKPSNVLLDDYMTARVGDFGLARILSP 793 (949)
Q Consensus 763 vHrDlkp~NIll~~~~~~kl~DfG~a~~~~~ 793 (949)
+||||||+||+++ ++.++++|||.+.....
T Consensus 137 vH~Dl~p~Nili~-~~~~~liDfg~a~~~~~ 166 (187)
T cd05119 137 VHGDLSEYNILVD-DGKVYIIDVPQAVEIDH 166 (187)
T ss_pred CcCCCChhhEEEE-CCcEEEEECcccccccC
Confidence 9999999999999 89999999999975543
No 454
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.53 E-value=1.7e-15 Score=176.32 Aligned_cols=257 Identities=23% Similarity=0.233 Sum_probs=187.8
Q ss_pred hcCCCCCCeeeeecCceEEEEEEcCC-CEEEEEEEEecCC--CcchHHHHHHHHHHHhcC-CCcceeEEeeeecccccCC
Q 039533 625 TSGFSSANLVGVGSFGSVYKGIIDEG-RTTIAVKVFNLQH--HGASRSFIAECKALKSIR-HRNLVKVLTACLGADYRGN 700 (949)
Q Consensus 625 ~~~y~~~~~lg~G~~g~Vy~~~~~~~-~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~ 700 (949)
...|.+.+.||+|.|+.|-.+....+ ...+|+|.+.... .........|..+-+.+. |+|++++++... ..
T Consensus 19 ~~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~-----~~ 93 (601)
T KOG0590|consen 19 NSQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSS-----SP 93 (601)
T ss_pred cccccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccC-----CC
Confidence 34577888899999999998887433 3456667665332 222345556777777776 999999998844 44
Q ss_pred ccceeEeeeccCCChhhhc-CCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHh-hCCCCCeEecCCCCCCeeecCCC
Q 039533 701 DFKASVYEFMHYGSLEEWL-HPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLH-HDCQPVTAHCDLKPSNVLLDDYM 778 (949)
Q Consensus 701 ~~~~lv~e~~~~gsL~~~l-~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH-~~~~~~ivHrDlkp~NIll~~~~ 778 (949)
+..+++.+|..++++.+.+ +. .....+...+..++.|+..++.|+| .. ++.|||+||+|.+++..+
T Consensus 94 ~~~~~~~~~s~g~~~f~~i~~~---------~~~~~~~~~~~~~~~ql~s~l~~~H~~~---~~~h~~ikP~n~~l~~s~ 161 (601)
T KOG0590|consen 94 RSYLLSLSYSDGGSLFSKISHP---------DSTGTSSSSASRYLPQLNSGLSYLHPEN---GVTHRDIKPSNSLLDESG 161 (601)
T ss_pred cccccccCcccccccccccccC---------CccCCCCcchhhhhhhhccCccccCccc---ccccCCCCCccchhccCC
Confidence 4889999999999998888 41 1113555667789999999999999 66 899999999999999999
Q ss_pred -ceEEeecccceecCC-CCCccccccccC-ccCccCccccCCC-ccCCccchHHHHHHHHHHHhCCCCCccccccCchhh
Q 039533 779 -TARVGDFGLARILSP-DHTQTSSFSVKG-SLGYIAPEYGVGC-EVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLH 854 (949)
Q Consensus 779 -~~kl~DfG~a~~~~~-~~~~~~~~~~~g-t~~y~aPE~~~~~-~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~ 854 (949)
..+++|||+|..+.. ...........| ++.|+|||...+. ...+..|+||.|+++.-+++|..|++.....+..+.
T Consensus 162 ~~l~~~df~~At~~~~~~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~~~~ 241 (601)
T KOG0590|consen 162 SALKIADFGLATAYRNKNGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDGRYS 241 (601)
T ss_pred CcccCCCchhhccccccCCcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCccccccccccce
Confidence 999999999998877 444444445568 9999999998885 456889999999999999999999986655544433
Q ss_pred hhccccCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 039533 855 NFGRKALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVH 926 (949)
Q Consensus 855 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 926 (949)
.|....... ...+ .........++..+++..+|..|.+.+++..
T Consensus 242 ~~~~~~~~~----------~~~~------------------~~~~~~~~~~~l~k~l~~~~~~r~s~~~~~~ 285 (601)
T KOG0590|consen 242 SWKSNKGRF----------TQLP------------------WNSISDQAHDLLHKILKENPSNRLSIEELKL 285 (601)
T ss_pred eeccccccc----------ccCc------------------cccCChhhhhcccccccCCchhccccccccc
Confidence 333221000 0000 0122234566777888888999988877643
No 455
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.52 E-value=1.1e-13 Score=143.96 Aligned_cols=141 Identities=17% Similarity=0.101 Sum_probs=106.2
Q ss_pred CCeee-eecCceEEEEEEcCCCEEEEEEEEecCC-------------CcchHHHHHHHHHHHhcCCCcc--eeEEeeeec
Q 039533 631 ANLVG-VGSFGSVYKGIIDEGRTTIAVKVFNLQH-------------HGASRSFIAECKALKSIRHRNL--VKVLTACLG 694 (949)
Q Consensus 631 ~~~lg-~G~~g~Vy~~~~~~~~~~vavK~~~~~~-------------~~~~~~~~~E~~~l~~l~h~ni--v~~~~~~~~ 694 (949)
...|| .||.|+||.+... +..+|||.+.... .....++.+|++++.++.|++| ++.+++...
T Consensus 36 ~~~lg~~~g~gtv~~v~~~--~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~ 113 (239)
T PRK01723 36 ARVVGSAKGRGTTWFVQTP--GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVV 113 (239)
T ss_pred CceeecCCCCccEEEEEeC--CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeee
Confidence 46788 8999999999885 6789999885321 1123567889999999998775 667766432
Q ss_pred ccccCCccceeEeeeccC-CChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCee
Q 039533 695 ADYRGNDFKASVYEFMHY-GSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVL 773 (949)
Q Consensus 695 ~~~~~~~~~~lv~e~~~~-gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIl 773 (949)
.. ......++|||++++ .+|.+++.. ..++.. .+.+++.++.+||+. ||+||||||+|||
T Consensus 114 ~~-~~~~~~~lV~e~l~G~~~L~~~l~~-----------~~l~~~----~~~~i~~~l~~lH~~---GI~HrDlkp~NIL 174 (239)
T PRK01723 114 RH-GLFYRADILIERIEGARDLVALLQE-----------APLSEE----QWQAIGQLIARFHDA---GVYHADLNAHNIL 174 (239)
T ss_pred ec-CcceeeeEEEEecCCCCCHHHHHhc-----------CCCCHH----HHHHHHHHHHHHHHC---CCCCCCCCchhEE
Confidence 21 111123599999997 689988752 123332 367899999999977 9999999999999
Q ss_pred ecCCCceEEeecccceecC
Q 039533 774 LDDYMTARVGDFGLARILS 792 (949)
Q Consensus 774 l~~~~~~kl~DfG~a~~~~ 792 (949)
++.++.++|+|||.+....
T Consensus 175 v~~~~~v~LIDfg~~~~~~ 193 (239)
T PRK01723 175 LDPDGKFWLIDFDRGELRT 193 (239)
T ss_pred EcCCCCEEEEECCCcccCC
Confidence 9998899999999987643
No 456
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=99.52 E-value=1.2e-13 Score=134.17 Aligned_cols=135 Identities=23% Similarity=0.208 Sum_probs=110.7
Q ss_pred CCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCCcchHHHHHHHHHHHhcCC--CcceeEEeeeecccccCCccceeEe
Q 039533 630 SANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHGASRSFIAECKALKSIRH--RNLVKVLTACLGADYRGNDFKASVY 707 (949)
Q Consensus 630 ~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h--~niv~~~~~~~~~~~~~~~~~~lv~ 707 (949)
+.+.+|+|.++.||++... +..+++|+...... ...+.+|+..++.++| .++++++++.... +..+++|
T Consensus 2 ~~~~i~~g~~~~v~~~~~~--~~~~~iK~~~~~~~--~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~-----~~~~~v~ 72 (155)
T cd05120 2 SIKLLKGGLTNRVYLLGTK--DEDYVLKINPSREK--GADREREVAILQLLARKGLPVPKVLASGESD-----GWSYLLM 72 (155)
T ss_pred cceecccccccceEEEEec--CCeEEEEecCCCCc--hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCC-----CccEEEE
Confidence 4578999999999999986 37899999864433 4578899999999976 5888888775433 4689999
Q ss_pred eeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEeeccc
Q 039533 708 EFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVGDFGL 787 (949)
Q Consensus 708 e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~DfG~ 787 (949)
||++++.+..+ +......++.+++++++++|.....+++|||++|+||++++.+.++++|||.
T Consensus 73 e~~~g~~~~~~-----------------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~ 135 (155)
T cd05120 73 EWIEGETLDEV-----------------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEY 135 (155)
T ss_pred EecCCeecccC-----------------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEeccc
Confidence 99988766433 3456678999999999999976445799999999999999989999999998
Q ss_pred cee
Q 039533 788 ARI 790 (949)
Q Consensus 788 a~~ 790 (949)
+..
T Consensus 136 ~~~ 138 (155)
T cd05120 136 AGY 138 (155)
T ss_pred ccC
Confidence 864
No 457
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=99.50 E-value=1.1e-15 Score=164.93 Aligned_cols=179 Identities=31% Similarity=0.429 Sum_probs=135.7
Q ss_pred CCCcccEEEeecceecccCCCcccccCCCCEEecCCcccccccCcccccccccceeecccccccccCCCCCCCCCCCcEE
Q 039533 316 NFVNLQRLDMWNNQLSGTIPPAIGELQNLKILGLNRNKLSGNIPPSIGNLKMLLNLFLNDNFLEVSIPSSLGQCESLIEI 395 (949)
Q Consensus 316 ~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 395 (949)
.++.-...||+.|++. .+|..+..+..|+.+.|++|.|. .+|..++++..|+.|+|+.|+++ ..|..++.|+ |+.|
T Consensus 73 ~ltdt~~aDlsrNR~~-elp~~~~~f~~Le~liLy~n~~r-~ip~~i~~L~~lt~l~ls~NqlS-~lp~~lC~lp-Lkvl 148 (722)
T KOG0532|consen 73 DLTDTVFADLSRNRFS-ELPEEACAFVSLESLILYHNCIR-TIPEAICNLEALTFLDLSSNQLS-HLPDGLCDLP-LKVL 148 (722)
T ss_pred cccchhhhhccccccc-cCchHHHHHHHHHHHHHHhccce-ecchhhhhhhHHHHhhhccchhh-cCChhhhcCc-ceeE
Confidence 3445566788888887 77777777777888888888887 77778888888888888888887 6777777665 7888
Q ss_pred EeeCccccCCCCCcccCCcccceeeccCCCccCCCCccccccccccceeeeccccccccCCcccccccchhhcccCcccc
Q 039533 396 NLSNNNLSGTIPPQFFSLSSLSISLDWSRNKLTGSLPIEVGKLKILEFLYVYENRLEGEIPSTFGNCIRLEQLGMGGNLF 475 (949)
Q Consensus 396 ~l~~N~l~~~~p~~~~~l~~l~~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l 475 (949)
-+++|+++ .+|+.++.+..+ ..||.+.|.+. .+|..++.+.+|+.|.+..|++. .+|.+++ .-.|..||+|.|++
T Consensus 149 i~sNNkl~-~lp~~ig~~~tl-~~ld~s~nei~-slpsql~~l~slr~l~vrRn~l~-~lp~El~-~LpLi~lDfScNki 223 (722)
T KOG0532|consen 149 IVSNNKLT-SLPEEIGLLPTL-AHLDVSKNEIQ-SLPSQLGYLTSLRDLNVRRNHLE-DLPEELC-SLPLIRLDFSCNKI 223 (722)
T ss_pred EEecCccc-cCCcccccchhH-HHhhhhhhhhh-hchHHhhhHHHHHHHHHhhhhhh-hCCHHHh-CCceeeeecccCce
Confidence 88888887 777777766666 57788888877 67777778888888888888877 6777777 33477788888888
Q ss_pred ccccCCCcCCCCCCCEEECCCCcCCCcCcc
Q 039533 476 QGPISSSLGSLRGLRVLDLSQNNLSGEIPK 505 (949)
Q Consensus 476 ~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~ 505 (949)
+ .||-.|.+|+.|++|-|.+|.|+ .+|.
T Consensus 224 s-~iPv~fr~m~~Lq~l~LenNPLq-SPPA 251 (722)
T KOG0532|consen 224 S-YLPVDFRKMRHLQVLQLENNPLQ-SPPA 251 (722)
T ss_pred e-ecchhhhhhhhheeeeeccCCCC-CChH
Confidence 7 67778888888888888888887 4443
No 458
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=99.50 E-value=1.6e-15 Score=163.47 Aligned_cols=194 Identities=32% Similarity=0.436 Sum_probs=170.0
Q ss_pred EEeecceecccCCC--cccccCCCCEEecCCcccccccCcccccccccceeecccccccccCCCCCCCCCCCcEEEeeCc
Q 039533 323 LDMWNNQLSGTIPP--AIGELQNLKILGLNRNKLSGNIPPSIGNLKMLLNLFLNDNFLEVSIPSSLGQCESLIEINLSNN 400 (949)
Q Consensus 323 L~L~~N~l~~~~p~--~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N 400 (949)
|.|++-++. ..|. +-..+..-...||+.|++. .+|..+..+..|+.+.|.+|.+. .+|..++++..|++|||+.|
T Consensus 55 l~Ls~rrlk-~fpr~a~~~~ltdt~~aDlsrNR~~-elp~~~~~f~~Le~liLy~n~~r-~ip~~i~~L~~lt~l~ls~N 131 (722)
T KOG0532|consen 55 LLLSGRRLK-EFPRGAASYDLTDTVFADLSRNRFS-ELPEEACAFVSLESLILYHNCIR-TIPEAICNLEALTFLDLSSN 131 (722)
T ss_pred cccccchhh-cCCCccccccccchhhhhccccccc-cCchHHHHHHHHHHHHHHhccce-ecchhhhhhhHHHHhhhccc
Confidence 444554554 3332 1134566678899999999 89999999999999999999998 89999999999999999999
Q ss_pred cccCCCCCcccCCcccceeeccCCCccCCCCccccccccccceeeeccccccccCCcccccccchhhcccCccccccccC
Q 039533 401 NLSGTIPPQFFSLSSLSISLDWSRNKLTGSLPIEVGKLKILEFLYVYENRLEGEIPSTFGNCIRLEQLGMGGNLFQGPIS 480 (949)
Q Consensus 401 ~l~~~~p~~~~~l~~l~~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~ 480 (949)
+++ .+|..++.++ | +.|-+++|+++ .+|..++.+..|..||.+.|++. .+|..++++.+|+.|+++.|++. .+|
T Consensus 132 qlS-~lp~~lC~lp-L-kvli~sNNkl~-~lp~~ig~~~tl~~ld~s~nei~-slpsql~~l~slr~l~vrRn~l~-~lp 205 (722)
T KOG0532|consen 132 QLS-HLPDGLCDLP-L-KVLIVSNNKLT-SLPEEIGLLPTLAHLDVSKNEIQ-SLPSQLGYLTSLRDLNVRRNHLE-DLP 205 (722)
T ss_pred hhh-cCChhhhcCc-c-eeEEEecCccc-cCCcccccchhHHHhhhhhhhhh-hchHHhhhHHHHHHHHHhhhhhh-hCC
Confidence 999 8999999886 3 57899999999 89999999999999999999999 89999999999999999999999 678
Q ss_pred CCcCCCCCCCEEECCCCcCCCcCcccccCCc-cceEeCCCCcCcCccc
Q 039533 481 SSLGSLRGLRVLDLSQNNLSGEIPKFLAGLS-LNNLNLSYNDLEGMVT 527 (949)
Q Consensus 481 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~-L~~l~ls~N~l~~~~~ 527 (949)
..++.| .|..||+|.|+++ .||-.|..++ |++|-|.+|+|...+-
T Consensus 206 ~El~~L-pLi~lDfScNkis-~iPv~fr~m~~Lq~l~LenNPLqSPPA 251 (722)
T KOG0532|consen 206 EELCSL-PLIRLDFSCNKIS-YLPVDFRKMRHLQVLQLENNPLQSPPA 251 (722)
T ss_pred HHHhCC-ceeeeecccCcee-ecchhhhhhhhheeeeeccCCCCCChH
Confidence 888866 6899999999999 8999999888 9999999999998543
No 459
>PLN03150 hypothetical protein; Provisional
Probab=99.45 E-value=1.3e-13 Score=163.43 Aligned_cols=111 Identities=35% Similarity=0.531 Sum_probs=63.3
Q ss_pred cceeeeccccccccCCcccccccchhhcccCccccccccCCCcCCCCCCCEEECCCCcCCCcCcccccCCc-cceEeCCC
Q 039533 441 LEFLYVYENRLEGEIPSTFGNCIRLEQLGMGGNLFQGPISSSLGSLRGLRVLDLSQNNLSGEIPKFLAGLS-LNNLNLSY 519 (949)
Q Consensus 441 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~-L~~l~ls~ 519 (949)
++.|+|++|.++|.+|..++.+++|+.|+|++|+|+|.+|..++.+++|+.|||++|+|+|.+|..+..+. |+.|+|++
T Consensus 420 v~~L~L~~n~L~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls~ 499 (623)
T PLN03150 420 IDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNG 499 (623)
T ss_pred EEEEECCCCCccccCCHHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECcC
Confidence 44555555555555555555555555555555555555555555555555555555555555555555544 55555555
Q ss_pred CcCcCccccc--ccccccccccccCCCCCCCCCC
Q 039533 520 NDLEGMVTTE--GVFKNASATRILGNSKLCGGIS 551 (949)
Q Consensus 520 N~l~~~~~~~--~~~~~~~~~~~~gn~~~c~~~~ 551 (949)
|+++|.+|.. ..+.....+.+.+|+.+|+.+.
T Consensus 500 N~l~g~iP~~l~~~~~~~~~l~~~~N~~lc~~p~ 533 (623)
T PLN03150 500 NSLSGRVPAALGGRLLHRASFNFTDNAGLCGIPG 533 (623)
T ss_pred CcccccCChHHhhccccCceEEecCCccccCCCC
Confidence 5555555542 1122334567788889998653
No 460
>KOG1266 consensus Protein kinase [Signal transduction mechanisms]
Probab=99.43 E-value=1.9e-13 Score=138.32 Aligned_cols=160 Identities=23% Similarity=0.326 Sum_probs=124.4
Q ss_pred HHHHHhcCCCcceeEEeeeecccccCCccceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHH
Q 039533 674 CKALKSIRHRNLVKVLTACLGADYRGNDFKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNY 753 (949)
Q Consensus 674 ~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~ 753 (949)
...+-++.|.|+|++..|+.+..+.+.....++.|||..|++..+|++.+ .....+......+|+.||..||.|
T Consensus 118 FdnllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~------~~~~a~~~~~wkkw~tqIlsal~y 191 (458)
T KOG1266|consen 118 FDNLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTK------KNQKALFQKAWKKWCTQILSALSY 191 (458)
T ss_pred HHHHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHH------HhhhhhhHHHHHHHHHHHHhhhhh
Confidence 34455567999999999998888777778899999999999999997432 234567888899999999999999
Q ss_pred HhhCCCCCeEecCCCCCCeeecCCCceEEeecccceecCCCCC---ccccccccCccCccCccccCCCccCCccchHHHH
Q 039533 754 LHHDCQPVTAHCDLKPSNVLLDDYMTARVGDFGLARILSPDHT---QTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYG 830 (949)
Q Consensus 754 LH~~~~~~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG 830 (949)
||+. .|+|+|+++.-+-|++..+|-+|+.--.-.. ..+... ........+-++|.|||.-.....+.++|||+||
T Consensus 192 Lhs~-~PpiihgnlTc~tifiq~ngLIkig~~ap~s-~h~s~~~~~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fg 269 (458)
T KOG1266|consen 192 LHSC-DPPIIHGNLTCDTIFIQHNGLIKIGSVAPDS-THPSVNSTREAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFG 269 (458)
T ss_pred hhcc-CCccccCCcchhheeecCCceEEecccCccc-cchhhhhhhHhhhhccccCCccccCCcCcccccccchhhhhhh
Confidence 9988 8999999999999999999888875211111 000000 0111122367899999997777788899999999
Q ss_pred HHHHHHHhCCC
Q 039533 831 ILLLELVIGKK 841 (949)
Q Consensus 831 vvl~elltg~~ 841 (949)
+...||..|..
T Consensus 270 mcAlemailEi 280 (458)
T KOG1266|consen 270 MCALEMAILEI 280 (458)
T ss_pred HHHHHHHHhee
Confidence 99999988775
No 461
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=99.39 E-value=2.5e-13 Score=154.28 Aligned_cols=202 Identities=39% Similarity=0.526 Sum_probs=125.1
Q ss_pred EEEccCccccCCCCCCCCCCCcccEEEeecceecccCCCcccccC-CCCEEecCCcccccccCcccccccccceeecccc
Q 039533 298 TLFLNNNKIYGSIPAGIGNFVNLQRLDMWNNQLSGTIPPAIGELQ-NLKILGLNRNKLSGNIPPSIGNLKMLLNLFLNDN 376 (949)
Q Consensus 298 ~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N 376 (949)
.+.++.|.+.. ....+..++.++.|++.+|.++ .+|.....+. +|+.|++++|++. .+|..++++++|+.|++++|
T Consensus 97 ~l~~~~~~~~~-~~~~~~~~~~l~~L~l~~n~i~-~i~~~~~~~~~nL~~L~l~~N~i~-~l~~~~~~l~~L~~L~l~~N 173 (394)
T COG4886 97 SLDLNLNRLRS-NISELLELTNLTSLDLDNNNIT-DIPPLIGLLKSNLKELDLSDNKIE-SLPSPLRNLPNLKNLDLSFN 173 (394)
T ss_pred eeecccccccc-CchhhhcccceeEEecCCcccc-cCccccccchhhcccccccccchh-hhhhhhhccccccccccCCc
Confidence 35555555532 2223344456666666666666 4555555553 6666666666666 45555666666666666666
Q ss_pred cccccCCCCCCCCCCCcEEEeeCccccCCCCCcccCCcccceeeccCCCccCCCCccccccccccceeeeccccccccCC
Q 039533 377 FLEVSIPSSLGQCESLIEINLSNNNLSGTIPPQFFSLSSLSISLDWSRNKLTGSLPIEVGKLKILEFLYVYENRLEGEIP 456 (949)
Q Consensus 377 ~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~l~~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 456 (949)
+++ .+|...+.+++|+.|++++|+++ .+|........+ .+|.+++|.+. ..+..+..+.++..+.+++|++. .++
T Consensus 174 ~l~-~l~~~~~~~~~L~~L~ls~N~i~-~l~~~~~~~~~L-~~l~~~~N~~~-~~~~~~~~~~~l~~l~l~~n~~~-~~~ 248 (394)
T COG4886 174 DLS-DLPKLLSNLSNLNNLDLSGNKIS-DLPPEIELLSAL-EELDLSNNSII-ELLSSLSNLKNLSGLELSNNKLE-DLP 248 (394)
T ss_pred hhh-hhhhhhhhhhhhhheeccCCccc-cCchhhhhhhhh-hhhhhcCCcce-ecchhhhhcccccccccCCceee-ecc
Confidence 666 44544445666777777777776 555554444444 45666666433 45556667777777777777776 446
Q ss_pred cccccccchhhcccCccccccccCCCcCCCCCCCEEECCCCcCCCcCcccccC
Q 039533 457 STFGNCIRLEQLGMGGNLFQGPISSSLGSLRGLRVLDLSQNNLSGEIPKFLAG 509 (949)
Q Consensus 457 ~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 509 (949)
..++.+++|+.|++++|+++.. +. ++.+.+|+.||+++|.++..+|.....
T Consensus 249 ~~~~~l~~l~~L~~s~n~i~~i-~~-~~~~~~l~~L~~s~n~~~~~~~~~~~~ 299 (394)
T COG4886 249 ESIGNLSNLETLDLSNNQISSI-SS-LGSLTNLRELDLSGNSLSNALPLIALL 299 (394)
T ss_pred chhccccccceecccccccccc-cc-ccccCccCEEeccCccccccchhhhcc
Confidence 6677777777777777777733 33 777777777777777777666654443
No 462
>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]
Probab=99.37 E-value=1.1e-11 Score=129.93 Aligned_cols=290 Identities=15% Similarity=0.137 Sum_probs=179.2
Q ss_pred CCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCCcchHHHHHHHHHHHhc-CCCcceeEEeeeecc--cccCCcccee
Q 039533 629 SSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHGASRSFIAECKALKSI-RHRNLVKVLTACLGA--DYRGNDFKAS 705 (949)
Q Consensus 629 ~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~--~~~~~~~~~l 705 (949)
.....||+|+-+.+|-.-.- +..+.|++......... +.++.|.+. .||-+-.-+.+-... +-+......+
T Consensus 14 ~~gr~LgqGgea~ly~l~e~---~d~VAKIYh~Pppa~~a---qk~a~la~~p~~p~~~~rvaWPqa~L~G~~~~~~iGf 87 (637)
T COG4248 14 PPGRPLGQGGEADLYTLGEV---RDQVAKIYHAPPPAAQA---QKVAELAATPDAPLLNYRVAWPQATLHGGRRGKVIGF 87 (637)
T ss_pred CCCccccCCccceeeecchh---hchhheeecCCCchHHH---HHHHHhccCCCCcchhhhhcccHHHhhCCCccceeEE
Confidence 45678999999999976443 33577888755443322 223334444 566443312111110 1112223567
Q ss_pred EeeeccCC-ChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEee
Q 039533 706 VYEFMHYG-SLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVGD 784 (949)
Q Consensus 706 v~e~~~~g-sL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~D 784 (949)
+|+.+.+. ....++.. +.....-...+|...++.++.+|.+.+.||+. |.+-||+.++|+|+++++.+.|+|
T Consensus 88 lmP~v~g~~pI~~~y~p----~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~~---Gh~vGDVn~~~~lVsd~~~V~LVd 160 (637)
T COG4248 88 LMPKVSGKEPIHMIYSP----ATRRQSYPHCAWDFLLRVARNLASAFATLHEH---GHVVGDVNQNSFLVSDDSKVVLVD 160 (637)
T ss_pred ecccCCCccchhhhcCc----hhhcccCCccccHHHHHHHHHHHHHHHHHHhc---CCcccccCccceeeecCceEEEEc
Confidence 77777653 23333332 22223455688999999999999999999988 899999999999999999999998
Q ss_pred cccceecCCCCCccccccccCccCccCccccC-----CCccCCccchHHHHHHHHHHHhC-CCCCccccccCchhhhhcc
Q 039533 785 FGLARILSPDHTQTSSFSVKGSLGYIAPEYGV-----GCEVSTNGDVYSYGILLLELVIG-KKPIDIMFEGDINLHNFGR 858 (949)
Q Consensus 785 fG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDiwSlGvvl~elltg-~~Pf~~~~~~~~~~~~~~~ 858 (949)
-..-.....+ ......+|...|.+||... +...+...|-|.+||++++++.| ++||..+......-.
T Consensus 161 sDsfqi~~ng---~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI~~~~~ap~---- 233 (637)
T COG4248 161 SDSFQINANG---TLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGIPLISDAPN---- 233 (637)
T ss_pred ccceeeccCC---ceEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCcccccCCCCC----
Confidence 6544433222 2223566999999999744 45677889999999999999986 999975532211000
Q ss_pred ccCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccC--CCCCCCCHHHHHHHHHHhHHhhc
Q 039533 859 KALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSME--LPQDRTNMTNVVHELQSIKNILL 936 (949)
Q Consensus 859 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~--dP~~RPs~~ev~~~L~~i~~~~~ 936 (949)
... .++.......... ....+.+..+.....-.+..+..+..+|+.. .+.-|||++.++..|.++.+.+.
T Consensus 234 -p~E---~~Ia~g~f~ya~~----~~~g~~p~P~~~P~~~Lpp~vqAlF~qaF~~~~~~~~RP~a~aW~aAl~al~~~L~ 305 (637)
T COG4248 234 -PLE---TDIAHGRFAYASD----QRRGLKPPPRSIPLSMLPPDVQALFQQAFTESGVATPRPTAKAWVAALDALRQQLK 305 (637)
T ss_pred -cch---hhhhcceeeechh----ccCCCCCCCCCCChhhcCHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHHHHhhh
Confidence 000 0000000000000 0000000111111233455667777788765 35689999999999999999998
Q ss_pred cC------------CCCCCccc
Q 039533 937 GV------------ELCPPCKV 946 (949)
Q Consensus 937 ~~------------~~~~~~~~ 946 (949)
+| -.||||.-
T Consensus 306 ~C~v~a~H~y~~hl~~CPwCa~ 327 (637)
T COG4248 306 KCTVSAMHVYPVHLTDCPWCAL 327 (637)
T ss_pred hhhhcccccccCCCCCCchhhh
Confidence 88 57999974
No 463
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=99.34 E-value=9.5e-13 Score=149.58 Aligned_cols=199 Identities=38% Similarity=0.515 Sum_probs=171.1
Q ss_pred cEEEeecceecccCCCcccccCCCCEEecCCcccccccCccccccc-ccceeecccccccccCCCCCCCCCCCcEEEeeC
Q 039533 321 QRLDMWNNQLSGTIPPAIGELQNLKILGLNRNKLSGNIPPSIGNLK-MLLNLFLNDNFLEVSIPSSLGQCESLIEINLSN 399 (949)
Q Consensus 321 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~ 399 (949)
..|+++.|.+. ..+..+..++.++.|++.+|.++ .+|.....++ +|+.|++++|.+. .+|..+..+++|+.|++++
T Consensus 96 ~~l~~~~~~~~-~~~~~~~~~~~l~~L~l~~n~i~-~i~~~~~~~~~nL~~L~l~~N~i~-~l~~~~~~l~~L~~L~l~~ 172 (394)
T COG4886 96 PSLDLNLNRLR-SNISELLELTNLTSLDLDNNNIT-DIPPLIGLLKSNLKELDLSDNKIE-SLPSPLRNLPNLKNLDLSF 172 (394)
T ss_pred ceeeccccccc-cCchhhhcccceeEEecCCcccc-cCccccccchhhcccccccccchh-hhhhhhhccccccccccCC
Confidence 46899999985 23445566789999999999999 7788788885 9999999999998 6777889999999999999
Q ss_pred ccccCCCCCcccCCcccceeeccCCCccCCCCccccccccccceeeeccccccccCCcccccccchhhcccCcccccccc
Q 039533 400 NNLSGTIPPQFFSLSSLSISLDWSRNKLTGSLPIEVGKLKILEFLYVYENRLEGEIPSTFGNCIRLEQLGMGGNLFQGPI 479 (949)
Q Consensus 400 N~l~~~~p~~~~~l~~l~~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~ 479 (949)
|+++ .+|......+.+ ..|++++|+++ .+|.....+..|++|++++|++. ..+..+.++.++..|.+++|++. .+
T Consensus 173 N~l~-~l~~~~~~~~~L-~~L~ls~N~i~-~l~~~~~~~~~L~~l~~~~N~~~-~~~~~~~~~~~l~~l~l~~n~~~-~~ 247 (394)
T COG4886 173 NDLS-DLPKLLSNLSNL-NNLDLSGNKIS-DLPPEIELLSALEELDLSNNSII-ELLSSLSNLKNLSGLELSNNKLE-DL 247 (394)
T ss_pred chhh-hhhhhhhhhhhh-hheeccCCccc-cCchhhhhhhhhhhhhhcCCcce-ecchhhhhcccccccccCCceee-ec
Confidence 9999 788877778888 78999999999 78887778888999999999765 68888999999999999999998 44
Q ss_pred CCCcCCCCCCCEEECCCCcCCCcCcccccCC-ccceEeCCCCcCcCccccc
Q 039533 480 SSSLGSLRGLRVLDLSQNNLSGEIPKFLAGL-SLNNLNLSYNDLEGMVTTE 529 (949)
Q Consensus 480 ~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~-~L~~l~ls~N~l~~~~~~~ 529 (949)
+..++.+++|+.|++++|+++. ++. +..+ .++.|++++|.+...+|..
T Consensus 248 ~~~~~~l~~l~~L~~s~n~i~~-i~~-~~~~~~l~~L~~s~n~~~~~~~~~ 296 (394)
T COG4886 248 PESIGNLSNLETLDLSNNQISS-ISS-LGSLTNLRELDLSGNSLSNALPLI 296 (394)
T ss_pred cchhccccccceeccccccccc-ccc-ccccCccCEEeccCccccccchhh
Confidence 7889999999999999999994 444 4444 4999999999999887754
No 464
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=99.32 E-value=6.7e-12 Score=142.16 Aligned_cols=143 Identities=20% Similarity=0.157 Sum_probs=99.8
Q ss_pred CCeeeeecCceEEEEEEcCCCEEEEEEEEecCCCcch----------------------------------------HHH
Q 039533 631 ANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHGAS----------------------------------------RSF 670 (949)
Q Consensus 631 ~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~----------------------------------------~~~ 670 (949)
.+.||.|++|.||+|+.. +|+.||||+.+....... -++
T Consensus 122 ~~plasaSigQVh~A~l~-~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf 200 (437)
T TIGR01982 122 EKPLAAASIAQVHRARLV-DGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDL 200 (437)
T ss_pred CcceeeeehhheEEEEec-CCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCH
Confidence 368999999999999987 789999999864321100 025
Q ss_pred HHHHHHHHhcC----CCcceeEEeeeecccccCCccceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHH
Q 039533 671 IAECKALKSIR----HRNLVKVLTACLGADYRGNDFKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAID 746 (949)
Q Consensus 671 ~~E~~~l~~l~----h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~q 746 (949)
.+|++.+.++. |.+-+.+-..+.+ .....++||||++|++|.++.... .... ...+++.+
T Consensus 201 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~----~~~~~vLvmE~i~G~~L~~~~~~~---------~~~~---~~~~ia~~ 264 (437)
T TIGR01982 201 RREAANASELGENFKNDPGVYVPEVYWD----RTSERVLTMEWIDGIPLSDIAALD---------EAGL---DRKALAEN 264 (437)
T ss_pred HHHHHHHHHHHHhcCCCCCEEeCCEehh----hcCCceEEEEeECCcccccHHHHH---------hcCC---CHHHHHHH
Confidence 55666666662 3322333223221 122469999999999998876410 0111 23456666
Q ss_pred HHH-HHHHHhhCCCCCeEecCCCCCCeeecCCCceEEeecccceecCC
Q 039533 747 IAY-ALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVGDFGLARILSP 793 (949)
Q Consensus 747 i~~-gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~ 793 (949)
++. .+..+|.. |++|+|+||.||++++++.++++|||++..+.+
T Consensus 265 ~~~~~l~ql~~~---g~~H~D~hPgNilv~~~g~i~liDfG~~~~l~~ 309 (437)
T TIGR01982 265 LARSFLNQVLRD---GFFHADLHPGNIFVLKDGKIIALDFGIVGRLSE 309 (437)
T ss_pred HHHHHHHHHHhC---CceeCCCCcccEEECCCCcEEEEeCCCeeECCH
Confidence 666 46788866 999999999999999999999999999987654
No 465
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.20 E-value=1.7e-11 Score=136.03 Aligned_cols=198 Identities=27% Similarity=0.305 Sum_probs=153.3
Q ss_pred CCCCCCeeee--ecCceEEEEEE--cCCCEEEEEEEEecCCC--cchHHHHHHHHHHHhc-CCCcceeEEeeeecccccC
Q 039533 627 GFSSANLVGV--GSFGSVYKGII--DEGRTTIAVKVFNLQHH--GASRSFIAECKALKSI-RHRNLVKVLTACLGADYRG 699 (949)
Q Consensus 627 ~y~~~~~lg~--G~~g~Vy~~~~--~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~ 699 (949)
.|.+.+.+|. |.+|.||.+.. ..++..+|+|.-+.... ....+-.+|+...+++ .|++.++.+..+ ++
T Consensus 115 ~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~-----e~ 189 (524)
T KOG0601|consen 115 RFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAW-----EG 189 (524)
T ss_pred hcccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCccc-----cc
Confidence 4566788999 99999999998 77888999998543322 3334455677777777 499999866664 34
Q ss_pred CccceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHH----HHHHHhhCCCCCeEecCCCCCCeeec
Q 039533 700 NDFKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAY----ALNYLHHDCQPVTAHCDLKPSNVLLD 775 (949)
Q Consensus 700 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~----gL~~LH~~~~~~ivHrDlkp~NIll~ 775 (949)
.+..++-+|++. .++.++.+. ....++....+.+..+..+ |+.++|+. +++|-|+||.||+..
T Consensus 190 ~~~lfiqtE~~~-~sl~~~~~~---------~~~~~p~~~l~~~~~~~~~~~~~al~~~hs~---~~~~~~~kp~~i~~~ 256 (524)
T KOG0601|consen 190 SGILFIQTELCG-ESLQSYCHT---------PCNFLPDNLLWNSLRDWLSRDVTALSHLHSN---NIVHDDLKPANIFTT 256 (524)
T ss_pred CCcceeeecccc-chhHHhhhc---------ccccCCchhhhhHHhhhhhcccccccccCCC---cccccccchhheecc
Confidence 447888888884 788888762 2233666677778888888 99999977 899999999999999
Q ss_pred CC-CceEEeecccceecCCCCCccc---cccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCC
Q 039533 776 DY-MTARVGDFGLARILSPDHTQTS---SFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPI 843 (949)
Q Consensus 776 ~~-~~~kl~DfG~a~~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf 843 (949)
.+ ...+++|||+...+.+...... .....|...|++||...+ .++.++|||++|.++.+..++..+.
T Consensus 257 ~~~~s~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~-l~~~~~di~sl~ev~l~~~l~~~~~ 327 (524)
T KOG0601|consen 257 SDWTSCKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNG-LATFASDIFSLGEVILEAILGSHLP 327 (524)
T ss_pred cccceeecCCcceeEEccCCccccceeeeecCCCCceEeChhhhcc-ccchHhhhcchhhhhHhhHhhcccc
Confidence 88 8899999999988876653221 112247788999999765 6788999999999999999988765
No 466
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=99.20 E-value=6.7e-11 Score=117.26 Aligned_cols=131 Identities=19% Similarity=0.098 Sum_probs=96.0
Q ss_pred CCeeeeecCceEEEEEEcCCCEEEEEEEEecCCCcchHHHHHHHHHHHhcCCCcc-eeEEeeeecccccCCccceeEeee
Q 039533 631 ANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHGASRSFIAECKALKSIRHRNL-VKVLTACLGADYRGNDFKASVYEF 709 (949)
Q Consensus 631 ~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ni-v~~~~~~~~~~~~~~~~~~lv~e~ 709 (949)
.+.++.|.++.||+++.. +..|++|+...... ....+.+|+.+++.+.+.++ ++++.+.. ...++||||
T Consensus 3 ~~~l~~G~~~~vy~~~~~--~~~~~lK~~~~~~~-~~~~~~~E~~~l~~l~~~~~~P~~~~~~~-------~~~~lv~e~ 72 (170)
T cd05151 3 ISPLKGGMTNKNYRVEVA--NKKYVVRIPGNGTE-LLINRENEAENSKLAAEAGIGPKLYYFDP-------ETGVLITEF 72 (170)
T ss_pred eeecCCcccCceEEEEEC--CeEEEEEeCCCCcc-cccCHHHHHHHHHHHHHhCCCCceEEEeC-------CCCeEEEEe
Confidence 467899999999999875 77899999754322 12356789999999865544 44554321 135799999
Q ss_pred ccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCC--CCCeEecCCCCCCeeecCCCceEEeeccc
Q 039533 710 MHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDC--QPVTAHCDLKPSNVLLDDYMTARVGDFGL 787 (949)
Q Consensus 710 ~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~--~~~ivHrDlkp~NIll~~~~~~kl~DfG~ 787 (949)
+++.++.+.-. ....++.+++++++.||+.. ..+++|||++|.||+++ ++.++++|||.
T Consensus 73 i~G~~l~~~~~------------------~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~ 133 (170)
T cd05151 73 IEGSELLTEDF------------------SDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEY 133 (170)
T ss_pred cCCCccccccc------------------cCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEeccc
Confidence 99987754310 11346789999999999762 22369999999999999 66899999998
Q ss_pred cee
Q 039533 788 ARI 790 (949)
Q Consensus 788 a~~ 790 (949)
+..
T Consensus 134 a~~ 136 (170)
T cd05151 134 AGM 136 (170)
T ss_pred ccC
Confidence 764
No 467
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=99.20 E-value=2.6e-10 Score=112.94 Aligned_cols=139 Identities=18% Similarity=0.118 Sum_probs=100.3
Q ss_pred CCeeeeecCceEEEEEEcC------CCEEEEEEEEecCCC----------------------cchHHHH----HHHHHHH
Q 039533 631 ANLVGVGSFGSVYKGIIDE------GRTTIAVKVFNLQHH----------------------GASRSFI----AECKALK 678 (949)
Q Consensus 631 ~~~lg~G~~g~Vy~~~~~~------~~~~vavK~~~~~~~----------------------~~~~~~~----~E~~~l~ 678 (949)
...||.|--+.||.|.... .+..+|||+++.... ...+.+. +|++.|+
T Consensus 2 ~g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~ 81 (197)
T cd05146 2 NGCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLK 81 (197)
T ss_pred CCccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHH
Confidence 3578999999999998653 247899999862210 0012233 8999999
Q ss_pred hcC--CCcceeEEeeeecccccCCccceeEeeeccCCChhh-hcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHH-
Q 039533 679 SIR--HRNLVKVLTACLGADYRGNDFKASVYEFMHYGSLEE-WLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYL- 754 (949)
Q Consensus 679 ~l~--h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~-~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~L- 754 (949)
++. .-++++.+++ . ..++||||+.+..+.. .++ ...++..+...+..+++.++.++
T Consensus 82 rl~~~Gv~vP~pi~~----~-----~~~lvME~Ig~~~~~~~~Lk-----------d~~~~~~~~~~i~~~i~~~l~~l~ 141 (197)
T cd05146 82 RMQKAGIPCPEVVVL----K-----KHVLVMSFIGDDQVPAPKLK-----------DAKLNDEEMKNAYYQVLSMMKQLY 141 (197)
T ss_pred HHHHcCCCCCeEEEe----c-----CCEEEEEEcCCCCccchhhh-----------ccccCHHHHHHHHHHHHHHHHHHH
Confidence 985 3567777754 1 4689999997653321 121 11244556677889999999999
Q ss_pred hhCCCCCeEecCCCCCCeeecCCCceEEeecccceecCC
Q 039533 755 HHDCQPVTAHCDLKPSNVLLDDYMTARVGDFGLARILSP 793 (949)
Q Consensus 755 H~~~~~~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~ 793 (949)
|.. ++||||+++.||++++ +.++|+|||.|.....
T Consensus 142 H~~---glVHGDLs~~NIL~~~-~~v~iIDF~qav~~~h 176 (197)
T cd05146 142 KEC---NLVHADLSEYNMLWHD-GKVWFIDVSQSVEPTH 176 (197)
T ss_pred HhC---CeecCCCCHHHEEEEC-CcEEEEECCCceeCCC
Confidence 755 9999999999999974 6899999999876544
No 468
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=99.19 E-value=5e-11 Score=136.19 Aligned_cols=150 Identities=15% Similarity=0.106 Sum_probs=97.3
Q ss_pred cCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCCcc----------------------------------h----
Q 039533 626 SGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHGA----------------------------------S---- 667 (949)
Q Consensus 626 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~----------------------------------~---- 667 (949)
..|.. +.||.|++|.||+|+.+.+|+.||||+.++..... .
T Consensus 120 ~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l~ 198 (537)
T PRK04750 120 DDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTLH 198 (537)
T ss_pred HhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHH
Confidence 45665 78999999999999998669999999997442100 0
Q ss_pred --HHHHHHHHHHHhcC----CCcceeEEeeeecccccCCccceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHH
Q 039533 668 --RSFIAECKALKSIR----HRNLVKVLTACLGADYRGNDFKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRL 741 (949)
Q Consensus 668 --~~~~~E~~~l~~l~----h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~ 741 (949)
-++.+|+..+.+++ +...+.+-.++.+ .....++||||++|+.+.++-.-. .. ......+....+.
T Consensus 199 ~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d----~st~~VLvmE~i~G~~l~d~~~l~-~~---g~d~~~la~~~v~ 270 (537)
T PRK04750 199 DELDLMREAANASQLRRNFEDSDMLYVPEVYWD----YCSETVMVMERMYGIPVSDVAALR-AA---GTDMKLLAERGVE 270 (537)
T ss_pred HhhCHHHHHHHHHHHHHHccCCCCeecceeecc----cCCCceEEEeeecCccHHhHHHHH-hc---CCCHHHHHHHHHH
Confidence 12455666666552 3333332222211 123578999999999998742100 00 0001123333344
Q ss_pred HHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCC----ceEEeecccceecCCC
Q 039533 742 NIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYM----TARVGDFGLARILSPD 794 (949)
Q Consensus 742 ~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~----~~kl~DfG~a~~~~~~ 794 (949)
.++.|+. .. |++|+|+||.||+++.++ +++++|||++..+++.
T Consensus 271 ~~~~Qif-------~~---GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~~~ 317 (537)
T PRK04750 271 VFFTQVF-------RD---GFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLNKE 317 (537)
T ss_pred HHHHHHH-------hC---CeeeCCCChHHeEEecCCCCCCeEEEEecceEEECCHH
Confidence 4445543 23 899999999999999888 9999999999887553
No 469
>KOG1243 consensus Protein kinase [General function prediction only]
Probab=99.18 E-value=1.5e-10 Score=129.42 Aligned_cols=171 Identities=22% Similarity=0.211 Sum_probs=129.9
Q ss_pred EEEEcCCCEEEEEEEEecCCCcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCccceeEeeeccCCChhhhcCCCC
Q 039533 644 KGIIDEGRTTIAVKVFNLQHHGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFKASVYEFMHYGSLEEWLHPFT 723 (949)
Q Consensus 644 ~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~ 723 (949)
.|..+.++.+|.|.+++...........+-++.++.++||||+++++.+... ...|+|+|.+. .|..++..
T Consensus 30 ~~t~k~~~~~vsVF~~~~~~~~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~-----~~~ylvTErV~--Pl~~~lk~-- 100 (690)
T KOG1243|consen 30 DGTRKADGGPVSVFVYKRSNGEVTELAKRAVKRLKTLRHPNILSYLDTTEEE-----GTLYLVTERVR--PLETVLKE-- 100 (690)
T ss_pred ccceeccCCceEEEEEeCCCchhhHHHHHHHHHhhhccCchhhhhhhhhccc-----CceEEEeeccc--cHHHHHHH--
Confidence 4666778899999999866655556678889999999999999999885443 38999999985 57777752
Q ss_pred CCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEeecccceecCCCCCccccccc
Q 039533 724 GEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVGDFGLARILSPDHTQTSSFSV 803 (949)
Q Consensus 724 ~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~~ 803 (949)
++...+...+.||+.||.|||+.+ +++|++|.-+-|+|++.|+.||++|.++........... ..
T Consensus 101 -----------l~~~~v~~Gl~qIl~AL~FL~~d~--~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~~~~--~~ 165 (690)
T KOG1243|consen 101 -----------LGKEEVCLGLFQILAALSFLNDDC--NLVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNAPAK--SL 165 (690)
T ss_pred -----------hHHHHHHHHHHHHHHHHHHHhccC--CeeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCcccc--cc
Confidence 335567778999999999999876 999999999999999999999999998765432221000 11
Q ss_pred cCccCccCccccCCCccCCccchHHHHHHHHHHHhCC
Q 039533 804 KGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGK 840 (949)
Q Consensus 804 ~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~ 840 (949)
.--..|..|+.+.... -..|.|.|||+++|++.|.
T Consensus 166 ~~~~s~~~P~~~~~s~--~s~D~~~Lg~li~el~ng~ 200 (690)
T KOG1243|consen 166 YLIESFDDPEEIDPSE--WSIDSWGLGCLIEELFNGS 200 (690)
T ss_pred hhhhcccChhhcCccc--cchhhhhHHHHHHHHhCcc
Confidence 1223456666543322 3469999999999999993
No 470
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=99.15 E-value=5.6e-12 Score=125.84 Aligned_cols=133 Identities=26% Similarity=0.277 Sum_probs=93.4
Q ss_pred CCCCcEEEeeCccccCCCCCcccCCcccceeeccCCCccCCCCccccccccccceeeeccccccccCCcccccccchhhc
Q 039533 389 CESLIEINLSNNNLSGTIPPQFFSLSSLSISLDWSRNKLTGSLPIEVGKLKILEFLYVYENRLEGEIPSTFGNCIRLEQL 468 (949)
Q Consensus 389 l~~L~~L~l~~N~l~~~~p~~~~~l~~l~~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 468 (949)
+..|+++|||+|.|+ .+.++..-++.+ +.|++|+|.++ .+ ..+..+++|+.||||+|.++ .+-.+-..+.+++.|
T Consensus 283 Wq~LtelDLS~N~I~-~iDESvKL~Pki-r~L~lS~N~i~-~v-~nLa~L~~L~~LDLS~N~Ls-~~~Gwh~KLGNIKtL 357 (490)
T KOG1259|consen 283 WQELTELDLSGNLIT-QIDESVKLAPKL-RRLILSQNRIR-TV-QNLAELPQLQLLDLSGNLLA-ECVGWHLKLGNIKTL 357 (490)
T ss_pred Hhhhhhccccccchh-hhhhhhhhccce-eEEecccccee-ee-hhhhhcccceEeecccchhH-hhhhhHhhhcCEeee
Confidence 445666666666666 555555555555 56666666665 22 23667788888888888887 566666677888888
Q ss_pred ccCccccccccCCCcCCCCCCCEEECCCCcCCCcC-cccccCCc-cceEeCCCCcCcCcccc
Q 039533 469 GMGGNLFQGPISSSLGSLRGLRVLDLSQNNLSGEI-PKFLAGLS-LNNLNLSYNDLEGMVTT 528 (949)
Q Consensus 469 ~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~-p~~~~~~~-L~~l~ls~N~l~~~~~~ 528 (949)
.|++|.|... +.++.|-+|..||+++|+|.... -..++.++ |+.+.|.+|++.+.+..
T Consensus 358 ~La~N~iE~L--SGL~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NPl~~~vdY 417 (490)
T KOG1259|consen 358 KLAQNKIETL--SGLRKLYSLVNLDLSSNQIEELDEVNHIGNLPCLETLRLTGNPLAGSVDY 417 (490)
T ss_pred ehhhhhHhhh--hhhHhhhhheeccccccchhhHHHhcccccccHHHHHhhcCCCccccchH
Confidence 8888888733 45777888889999999887321 23455666 89999999999988654
No 471
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]
Probab=99.10 E-value=1.3e-11 Score=140.37 Aligned_cols=266 Identities=26% Similarity=0.317 Sum_probs=142.0
Q ss_pred CCCceeeccCceeccccCCcccCcccCcEEeeccccccCcCCCCCCCCccceeecCCCccccccccccccCCCCCcEEEC
Q 039533 89 SFLKQLYLQVNSFTHEIPSEIGGLRRLKVLALNNNSICGEIPTNISRCSTLIPIHPQNNQLVGKILSRFSSLSKTEILNL 168 (949)
Q Consensus 89 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~L~~L~~L~L 168 (949)
+.++.++..++.+.+.--. ...+..++.+++..|.+. .+-..+..+++|..|++.+|+|..+... +..+++|++|+|
T Consensus 49 ~~~~~~~~~~~~~~~~~~~-~~~l~~l~~l~l~~n~i~-~~~~~l~~~~~l~~l~l~~n~i~~i~~~-l~~~~~L~~L~l 125 (414)
T KOG0531|consen 49 SDLEEIDLIFNLDGSDEDL-VESLTSLKELNLRQNLIA-KILNHLSKLKSLEALDLYDNKIEKIENL-LSSLVNLQVLDL 125 (414)
T ss_pred chhhhhcchhccccchhhh-HHHhHhHHhhccchhhhh-hhhcccccccceeeeeccccchhhcccc-hhhhhcchheec
Confidence 3344555555444321111 145667777778888776 3444466667777777777776543321 555666677777
Q ss_pred CCCCCCCCCCCCcCCCCCccEEeccccccCCCCCCcccCCCccccccccCcccccccccccCCCCChhhhcccccccccc
Q 039533 169 GSNHLTGSIPSSLGNLSSIHTISLAYNNLDGTIPNSFGWFENLVFLSLAANNLSVVENKLTGEVPSLEKLQRLQHFTITS 248 (949)
Q Consensus 169 s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~l~~~~~~l~~l~~L~~L~l~~ 248 (949)
++|.|+... .+..++.|+.|++++|.|+. + ..+..+.+|+.+++++|.+..+++. + +..+.+++.+.+.+
T Consensus 126 s~N~I~~i~--~l~~l~~L~~L~l~~N~i~~-~-~~~~~l~~L~~l~l~~n~i~~ie~~-----~-~~~~~~l~~l~l~~ 195 (414)
T KOG0531|consen 126 SFNKITKLE--GLSTLTLLKELNLSGNLISD-I-SGLESLKSLKLLDLSYNRIVDIEND-----E-LSELISLEELDLGG 195 (414)
T ss_pred ccccccccc--chhhccchhhheeccCcchh-c-cCCccchhhhcccCCcchhhhhhhh-----h-hhhccchHHHhccC
Confidence 777666332 34455556666666666652 2 2344466666666666666554421 1 23444455555555
Q ss_pred CCCCCCCCCCcchhccccccCcccEEEccCCCCCccCCchhhcccccccEEEccCccccCCCCCCCCCCC--cccEEEee
Q 039533 249 NSLGSGGNDDLSFLCSLTNATRLTWMHINSNNFGGLLPGCISNLSKTIKTLFLNNNKIYGSIPAGIGNFV--NLQRLDMW 326 (949)
Q Consensus 249 N~l~~~~~~~~~~~~~l~~~~~L~~L~L~~N~l~~~~p~~~~~l~~~L~~L~L~~N~l~~~~~~~~~~l~--~L~~L~L~ 326 (949)
|.+... -.-... ..+..+++..|+++..-+ +..+. .|+.++++
T Consensus 196 n~i~~i------------------------------~~~~~~---~~l~~~~l~~n~i~~~~~--l~~~~~~~L~~l~l~ 240 (414)
T KOG0531|consen 196 NSIREI------------------------------EGLDLL---KKLVLLSLLDNKISKLEG--LNELVMLHLRELYLS 240 (414)
T ss_pred Cchhcc------------------------------cchHHH---HHHHHhhcccccceeccC--cccchhHHHHHHhcc
Confidence 544321 111000 123334556666652221 12222 36777777
Q ss_pred cceecccCCCcccccCCCCEEecCCcccccccCcccccccccceeeccccccccc---CCCC-CCCCCCCcEEEeeCccc
Q 039533 327 NNQLSGTIPPAIGELQNLKILGLNRNKLSGNIPPSIGNLKMLLNLFLNDNFLEVS---IPSS-LGQCESLIEINLSNNNL 402 (949)
Q Consensus 327 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~---~p~~-~~~l~~L~~L~l~~N~l 402 (949)
+|.+. ..+..+..+.++..|+++.|++... ..+.....+..+.+..|.+... .... ....+.++.+.+..|.+
T Consensus 241 ~n~i~-~~~~~~~~~~~l~~l~~~~n~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (414)
T KOG0531|consen 241 GNRIS-RSPEGLENLKNLPVLDLSSNRISNL--EGLERLPKLSELWLNDNKLALSEAISQEYITSAAPTLVTLTLELNPI 317 (414)
T ss_pred cCccc-cccccccccccccccchhhcccccc--ccccccchHHHhccCcchhcchhhhhccccccccccccccccccCcc
Confidence 77776 3445566667777777777777632 2244555666666666665421 1111 34455566666666666
Q ss_pred cCC
Q 039533 403 SGT 405 (949)
Q Consensus 403 ~~~ 405 (949)
...
T Consensus 318 ~~~ 320 (414)
T KOG0531|consen 318 RKI 320 (414)
T ss_pred ccc
Confidence 543
No 472
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=99.09 E-value=5e-11 Score=115.66 Aligned_cols=127 Identities=24% Similarity=0.278 Sum_probs=40.9
Q ss_pred CCCCCCCceeeccCceeccccCCccc-CcccCcEEeeccccccCcCCCCCCCCccceeecCCCccccccccccccCCCCC
Q 039533 85 IGNLSFLKQLYLQVNSFTHEIPSEIG-GLRRLKVLALNNNSICGEIPTNISRCSTLIPIHPQNNQLVGKILSRFSSLSKT 163 (949)
Q Consensus 85 l~~l~~L~~L~L~~n~l~~~~p~~~~-~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~L~~L 163 (949)
+.+...+++|+|++|.|+. |. .++ .+.+|+.||||+|.|+ .++ .+..++.|++|++++|+|+.........+++|
T Consensus 15 ~~n~~~~~~L~L~~n~I~~-Ie-~L~~~l~~L~~L~Ls~N~I~-~l~-~l~~L~~L~~L~L~~N~I~~i~~~l~~~lp~L 90 (175)
T PF14580_consen 15 YNNPVKLRELNLRGNQIST-IE-NLGATLDKLEVLDLSNNQIT-KLE-GLPGLPRLKTLDLSNNRISSISEGLDKNLPNL 90 (175)
T ss_dssp -----------------------S--TT-TT--EEE-TTS--S---T-T----TT--EEE--SS---S-CHHHHHH-TT-
T ss_pred ccccccccccccccccccc-cc-chhhhhcCCCEEECCCCCCc-ccc-CccChhhhhhcccCCCCCCccccchHHhCCcC
Confidence 3455567888888888873 32 455 5778888888888887 343 46667777777777777775543333456777
Q ss_pred cEEECCCCCCCCCCC-CCcCCCCCccEEeccccccCCCCCC----cccCCCccccccc
Q 039533 164 EILNLGSNHLTGSIP-SSLGNLSSIHTISLAYNNLDGTIPN----SFGWFENLVFLSL 216 (949)
Q Consensus 164 ~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~p~----~~~~l~~L~~L~L 216 (949)
++|+|++|+|...-- ..+..+++|++|+|.+|.++.. +. .+..+++|+.||-
T Consensus 91 ~~L~L~~N~I~~l~~l~~L~~l~~L~~L~L~~NPv~~~-~~YR~~vi~~lP~Lk~LD~ 147 (175)
T PF14580_consen 91 QELYLSNNKISDLNELEPLSSLPKLRVLSLEGNPVCEK-KNYRLFVIYKLPSLKVLDG 147 (175)
T ss_dssp -EEE-TTS---SCCCCGGGGG-TT--EEE-TT-GGGGS-TTHHHHHHHH-TT-SEETT
T ss_pred CEEECcCCcCCChHHhHHHHcCCCcceeeccCCcccch-hhHHHHHHHHcChhheeCC
Confidence 777777777763221 3455666777777777766632 22 2444555555553
No 473
>PF08263 LRRNT_2: Leucine rich repeat N-terminal domain; InterPro: IPR013210 Leucine-rich repeats (LRR) consist of 2-45 motifs of 20-30 amino acids in length that generally folds into an arc or horseshoe shape []. LRRs occur in proteins ranging from viruses to eukaryotes, and appear to provide a structural framework for the formation of protein-protein interactions [, ].Proteins containing LRRs include tyrosine kinase receptors, cell-adhesion molecules, virulence factors, and extracellular matrix-binding glycoproteins, and are involved in a variety of biological processes, including signal transduction, cell adhesion, DNA repair, recombination, transcription, RNA processing, disease resistance, apoptosis, and the immune response []. Sequence analyses of LRR proteins suggested the existence of several different subfamilies of LRRs. The significance of this classification is that repeats from different subfamilies never occur simultaneously and have most probably evolved independently. It is, however, now clear that all major classes of LRR have curved horseshoe structures with a parallel beta sheet on the concave side and mostly helical elements on the convex side. At least six families of LRR proteins, characterised by different lengths and consensus sequences of the repeats, have been identified. Eleven-residue segments of the LRRs (LxxLxLxxN/CxL), corresponding to the beta-strand and adjacent loop regions, are conserved in LRR proteins, whereas the remaining parts of the repeats (herein termed variable) may be very different. Despite the differences, each of the variable parts contains two half-turns at both ends and a "linear" segment (as the chain follows a linear path overall), usually formed by a helix, in the middle. The concave face and the adjacent loops are the most common protein interaction surfaces on LRR proteins. 3D structure of some LRR proteins-ligand complexes show that the concave surface of LRR domain is ideal for interaction with alpha-helix, thus supporting earlier conclusions that the elongated and curved LRR structure provides an outstanding framework for achieving diverse protein-protein interactions []. Molecular modeling suggests that the conserved pattern LxxLxL, which is shorter than the previously proposed LxxLxLxxN/CxL is sufficient to impart the characteristic horseshoe curvature to proteins with 20- to 30-residue repeats []. This domain is often found at the N terminus of tandem leucine rich repeats.; PDB: 3RGZ_A 3RJ0_A 3RIZ_A 3RGX_A 1OGQ_A.
Probab=99.06 E-value=1e-10 Score=85.21 Aligned_cols=41 Identities=51% Similarity=0.941 Sum_probs=31.7
Q ss_pred ChhhHHHHHHHHhccCCCCCCCccCccCC--CCcceeeeeEEe
Q 039533 21 NETDRVALLEFKSKSTYDPVGVLGTWNES--IHFCKWYGVTCS 61 (949)
Q Consensus 21 ~~~~~~aLl~~k~~~~~~~~~~l~sW~~~--~~~C~w~gv~C~ 61 (949)
+++|++||++||+++..+|.+.+.+|+.+ .+||+|.||+|+
T Consensus 1 ~~~d~~aLl~~k~~l~~~~~~~l~~W~~~~~~~~C~W~GV~Cd 43 (43)
T PF08263_consen 1 PNQDRQALLAFKKSLNNDPSGVLSSWNPSSDSDPCSWSGVTCD 43 (43)
T ss_dssp -HHHHHHHHHHHHCTT-SC-CCCTT--TT--S-CCCSTTEEE-
T ss_pred CcHHHHHHHHHHHhcccccCcccccCCCcCCCCCeeeccEEeC
Confidence 36899999999999987888999999977 799999999996
No 474
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=99.06 E-value=4.7e-11 Score=119.37 Aligned_cols=131 Identities=27% Similarity=0.288 Sum_probs=76.7
Q ss_pred cccceeecccccccccCCCCCCCCCCCcEEEeeCccccCCCCCcccCCcccceeeccCCCccCCCCccccccccccceee
Q 039533 366 KMLLNLFLNDNFLEVSIPSSLGQCESLIEINLSNNNLSGTIPPQFFSLSSLSISLDWSRNKLTGSLPIEVGKLKILEFLY 445 (949)
Q Consensus 366 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~l~~~L~ls~N~l~~~~p~~~~~l~~L~~L~ 445 (949)
..|++++|++|.|+ .+.++..-.+.++.|++|+|.|. .+.. +..+++| +.||||+|.++ .+..+-..+.+.+.|.
T Consensus 284 q~LtelDLS~N~I~-~iDESvKL~Pkir~L~lS~N~i~-~v~n-La~L~~L-~~LDLS~N~Ls-~~~Gwh~KLGNIKtL~ 358 (490)
T KOG1259|consen 284 QELTELDLSGNLIT-QIDESVKLAPKLRRLILSQNRIR-TVQN-LAELPQL-QLLDLSGNLLA-ECVGWHLKLGNIKTLK 358 (490)
T ss_pred hhhhhccccccchh-hhhhhhhhccceeEEecccccee-eehh-hhhcccc-eEeecccchhH-hhhhhHhhhcCEeeee
Confidence 34445555555544 34444444455555555555554 2222 4444444 45555555555 3334444566667777
Q ss_pred eccccccccCCcccccccchhhcccCccccccc-cCCCcCCCCCCCEEECCCCcCCCcC
Q 039533 446 VYENRLEGEIPSTFGNCIRLEQLGMGGNLFQGP-ISSSLGSLRGLRVLDLSQNNLSGEI 503 (949)
Q Consensus 446 Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~-~~~~~~~l~~L~~L~Ls~N~l~~~~ 503 (949)
|+.|.|.. -+.++.+-+|..||+++|+|+.. --..+++|+-|+.|.|.+|.|.+.+
T Consensus 359 La~N~iE~--LSGL~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NPl~~~v 415 (490)
T KOG1259|consen 359 LAQNKIET--LSGLRKLYSLVNLDLSSNQIEELDEVNHIGNLPCLETLRLTGNPLAGSV 415 (490)
T ss_pred hhhhhHhh--hhhhHhhhhheeccccccchhhHHHhcccccccHHHHHhhcCCCccccc
Confidence 77776652 23366677778888888887632 2356888999999999999998543
No 475
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]
Probab=99.05 E-value=2.2e-11 Score=138.51 Aligned_cols=271 Identities=23% Similarity=0.239 Sum_probs=119.8
Q ss_pred cCcEEeeccccccCcCCCCCCCCccceeecCCCccccccccccccCCCCCcEEECCCCCCCCCCCCCcCCCCCccEEecc
Q 039533 114 RLKVLALNNNSICGEIPTNISRCSTLIPIHPQNNQLVGKILSRFSSLSKTEILNLGSNHLTGSIPSSLGNLSSIHTISLA 193 (949)
Q Consensus 114 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 193 (949)
.++.++..++.+.+.--. ...+..++.+++..|.|.. +...+..+++|+.|++.+|+|.. +...+..+++|++|+|+
T Consensus 50 ~~~~~~~~~~~~~~~~~~-~~~l~~l~~l~l~~n~i~~-~~~~l~~~~~l~~l~l~~n~i~~-i~~~l~~~~~L~~L~ls 126 (414)
T KOG0531|consen 50 DLEEIDLIFNLDGSDEDL-VESLTSLKELNLRQNLIAK-ILNHLSKLKSLEALDLYDNKIEK-IENLLSSLVNLQVLDLS 126 (414)
T ss_pred hhhhhcchhccccchhhh-HHHhHhHHhhccchhhhhh-hhcccccccceeeeeccccchhh-cccchhhhhcchheecc
Confidence 444555555544311111 1344455555555555543 22334455555555555555552 22224445555555555
Q ss_pred ccccCCCCCCcccCCCccccccccCcccccccccccCCCCChhhhccccccccccCCCCCCCCCCcchhccccccCcccE
Q 039533 194 YNNLDGTIPNSFGWFENLVFLSLAANNLSVVENKLTGEVPSLEKLQRLQHFTITSNSLGSGGNDDLSFLCSLTNATRLTW 273 (949)
Q Consensus 194 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~l~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~~~~L~~ 273 (949)
+|+|+...+ +..++.|+.|++++|.|+.+. .+..++.|+.
T Consensus 127 ~N~I~~i~~--l~~l~~L~~L~l~~N~i~~~~--------------------------------------~~~~l~~L~~ 166 (414)
T KOG0531|consen 127 FNKITKLEG--LSTLTLLKELNLSGNLISDIS--------------------------------------GLESLKSLKL 166 (414)
T ss_pred ccccccccc--hhhccchhhheeccCcchhcc--------------------------------------CCccchhhhc
Confidence 555543222 333444444444444444322 2222444445
Q ss_pred EEccCCCCCccCCchhhcccccccEEEccCccccCCCCCCCCCCCcccEEEeecceecccCCCcccccC--CCCEEecCC
Q 039533 274 MHINSNNFGGLLPGCISNLSKTIKTLFLNNNKIYGSIPAGIGNFVNLQRLDMWNNQLSGTIPPAIGELQ--NLKILGLNR 351 (949)
Q Consensus 274 L~L~~N~l~~~~p~~~~~l~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~--~L~~L~Ls~ 351 (949)
+++++|++...-+.....+ ..++.+++.+|.+.. ...+..+..+..+++..|.++..-+ +..+. +|+.+++++
T Consensus 167 l~l~~n~i~~ie~~~~~~~-~~l~~l~l~~n~i~~--i~~~~~~~~l~~~~l~~n~i~~~~~--l~~~~~~~L~~l~l~~ 241 (414)
T KOG0531|consen 167 LDLSYNRIVDIENDELSEL-ISLEELDLGGNSIRE--IEGLDLLKKLVLLSLLDNKISKLEG--LNELVMLHLRELYLSG 241 (414)
T ss_pred ccCCcchhhhhhhhhhhhc-cchHHHhccCCchhc--ccchHHHHHHHHhhcccccceeccC--cccchhHHHHHHhccc
Confidence 5555555443322101122 235555666666542 2223333444444555555552211 11111 255555555
Q ss_pred cccccccCcccccccccceeecccccccccCCCCCCCCCCCcEEEeeCccccCCCCCcccCCcccceeeccCCCccCCCC
Q 039533 352 NKLSGNIPPSIGNLKMLLNLFLNDNFLEVSIPSSLGQCESLIEINLSNNNLSGTIPPQFFSLSSLSISLDWSRNKLTGSL 431 (949)
Q Consensus 352 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~l~~~L~ls~N~l~~~~ 431 (949)
|++. ..+..+..+..+..|++.+|++...- .+.....+..+.+..|.+... . ...
T Consensus 242 n~i~-~~~~~~~~~~~l~~l~~~~n~~~~~~--~~~~~~~~~~~~~~~~~~~~~-~---------------------~~~ 296 (414)
T KOG0531|consen 242 NRIS-RSPEGLENLKNLPVLDLSSNRISNLE--GLERLPKLSELWLNDNKLALS-E---------------------AIS 296 (414)
T ss_pred Cccc-cccccccccccccccchhhccccccc--cccccchHHHhccCcchhcch-h---------------------hhh
Confidence 5555 23334444455555555555544211 122223333333333333210 0 011
Q ss_pred ccc-cccccccceeeeccccccccCCc
Q 039533 432 PIE-VGKLKILEFLYVYENRLEGEIPS 457 (949)
Q Consensus 432 p~~-~~~l~~L~~L~Ls~N~l~~~~p~ 457 (949)
... ......++.+++..|.+....+.
T Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (414)
T KOG0531|consen 297 QEYITSAAPTLVTLTLELNPIRKISSL 323 (414)
T ss_pred ccccccccccccccccccCcccccccc
Confidence 111 45667788888888888765553
No 476
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.04 E-value=1.6e-09 Score=102.81 Aligned_cols=131 Identities=20% Similarity=0.192 Sum_probs=96.2
Q ss_pred CeeeeecCceEEEEEEcCCCEEEEEEEEecCCCcc--------hHHHHHHHHHHHhcCCCcceeEEeeeecccccCCccc
Q 039533 632 NLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHGA--------SRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFK 703 (949)
Q Consensus 632 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~--------~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 703 (949)
..+++|+-+.||.+.+. |..+++|.-.+..... ..+..+|++++.+++--.|...+-+..+.+ ..
T Consensus 2 ~~i~~GAEa~i~~~~~~--g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~-----~~ 74 (204)
T COG3642 2 DLIKQGAEAIIYLTDFL--GLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPD-----NG 74 (204)
T ss_pred chhhCCcceeEEeeecc--CcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCC-----CC
Confidence 45789999999999875 4557777643222111 146778999999986443333222333333 56
Q ss_pred eeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEe
Q 039533 704 ASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVG 783 (949)
Q Consensus 704 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~ 783 (949)
.++|||++|..|.+++.. . ...++..+-+-+.-||.. ||+|+|+.++||++..+. +.++
T Consensus 75 ~I~me~I~G~~lkd~l~~----------~-------~~~~~r~vG~~vg~lH~~---givHGDLTtsNiIl~~~~-i~~I 133 (204)
T COG3642 75 LIVMEYIEGELLKDALEE----------A-------RPDLLREVGRLVGKLHKA---GIVHGDLTTSNIILSGGR-IYFI 133 (204)
T ss_pred EEEEEEeCChhHHHHHHh----------c-------chHHHHHHHHHHHHHHhc---CeecCCCccceEEEeCCc-EEEE
Confidence 899999999999988862 1 245778888888999977 999999999999998864 9999
Q ss_pred eccccee
Q 039533 784 DFGLARI 790 (949)
Q Consensus 784 DfG~a~~ 790 (949)
|||++..
T Consensus 134 DfGLg~~ 140 (204)
T COG3642 134 DFGLGEF 140 (204)
T ss_pred ECCcccc
Confidence 9999874
No 477
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=99.03 E-value=3e-11 Score=127.38 Aligned_cols=64 Identities=22% Similarity=0.247 Sum_probs=41.6
Q ss_pred cCCCCCcEEECCCCCCCCCCC--CCcCCCCCccEEeccccccCCCCC--CcccCCCccccccccCcccc
Q 039533 158 SSLSKTEILNLGSNHLTGSIP--SSLGNLSSIHTISLAYNNLDGTIP--NSFGWFENLVFLSLAANNLS 222 (949)
Q Consensus 158 ~~L~~L~~L~Ls~N~l~~~~p--~~~~~l~~L~~L~L~~N~l~~~~p--~~~~~l~~L~~L~Ls~N~l~ 222 (949)
+++++|+...|.+.... ..+ .....+++++.||||.|-+....| .....|++|+.|+|+.|++.
T Consensus 118 sn~kkL~~IsLdn~~V~-~~~~~~~~k~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~ 185 (505)
T KOG3207|consen 118 SNLKKLREISLDNYRVE-DAGIEEYSKILPNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLS 185 (505)
T ss_pred hhHHhhhheeecCcccc-ccchhhhhhhCCcceeecchhhhHHhHHHHHHHHHhcccchhccccccccc
Confidence 46777888888888776 333 355677778888888887763222 23345666777777766654
No 478
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.01 E-value=2.2e-10 Score=127.32 Aligned_cols=249 Identities=18% Similarity=0.129 Sum_probs=169.3
Q ss_pred HhcCCCCCCeeeeecCceEEEEEEc-CCCEEEEEEEEecCCCcchH--HHHHHHHHHHhc-CCCcceeEEeeeecccccC
Q 039533 624 ATSGFSSANLVGVGSFGSVYKGIID-EGRTTIAVKVFNLQHHGASR--SFIAECKALKSI-RHRNLVKVLTACLGADYRG 699 (949)
Q Consensus 624 ~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~~vavK~~~~~~~~~~~--~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~ 699 (949)
-..+|..+..||.|.|+.|+....+ .++..+++|........... .-..|+.+...+ .|.++++.+..+...+
T Consensus 263 ~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r--- 339 (524)
T KOG0601|consen 263 KLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLR--- 339 (524)
T ss_pred ecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCccccc---
Confidence 3457888899999999999998765 67888999987643322221 223455555555 5888888765544332
Q ss_pred CccceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCC-C
Q 039533 700 NDFKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDY-M 778 (949)
Q Consensus 700 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~-~ 778 (949)
..++--||+++++...... ....++...++++..|++.++.++|+. .++|+|+||+||++..+ +
T Consensus 340 --~~~ip~e~~~~~s~~l~~~----------~~~~~d~~~~~~~~~q~~~~l~~i~s~---~~~~~d~~psni~i~~~~~ 404 (524)
T KOG0601|consen 340 --QGYIPLEFCEGGSSSLRSV----------TSQMLDEDPRLRLTAQILTALNVIHSK---LFVHLDVKPSNILISNDGF 404 (524)
T ss_pred --cccCchhhhcCcchhhhhH----------HHHhcCcchhhhhHHHHHhccccccch---hhhcccccccceeeccchh
Confidence 5568889999998876652 234567778899999999999999955 89999999999999876 8
Q ss_pred ceEEeecccceecCCCCCccccccccCccCcc--CccccCCCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhh
Q 039533 779 TARVGDFGLARILSPDHTQTSSFSVKGSLGYI--APEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNF 856 (949)
Q Consensus 779 ~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~--aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~ 856 (949)
..++.|||++..+.-... ...+..+++ +|+......+..+.|+||||..+.|..+|..--... ..|
T Consensus 405 ~~~~~~~~~~t~~~~~~~-----~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~~~-------~~~ 472 (524)
T KOG0601|consen 405 FSKLGDFGCWTRLAFSSG-----VFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSESG-------VQS 472 (524)
T ss_pred hhhccccccccccceecc-----cccccccccccchhhccccccccccccccccccccccccCcccCccc-------ccc
Confidence 889999999875322211 111333444 555566667889999999999999999987532110 001
Q ss_pred ccccCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHHh
Q 039533 857 GRKALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHELQSI 931 (949)
Q Consensus 857 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i 931 (949)
. .+..... +.. ......+..+...+...++..||.+.+.....+-.
T Consensus 473 ~---------~i~~~~~-p~~-------------------~~~~~~~q~~~kv~~~~~~~~~~l~~~l~~~~~~~ 518 (524)
T KOG0601|consen 473 L---------TIRSGDT-PNL-------------------PGLKLQLQVLLKVMINPDRKRRPSAVELSLHSEFY 518 (524)
T ss_pred e---------eeecccc-cCC-------------------CchHHhhhhhhhhhcCCccccchhhhhhcccchhh
Confidence 0 0000000 000 01123456677788889999999988876655443
No 479
>KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms]
Probab=99.00 E-value=5.4e-12 Score=129.51 Aligned_cols=259 Identities=19% Similarity=0.237 Sum_probs=130.6
Q ss_pred CCCCCCCCCceeeccCceecc----ccCCcccCcccCcEEeecccc---ccCcCCCCCCCCccceeecCCCccccccccc
Q 039533 83 HFIGNLSFLKQLYLQVNSFTH----EIPSEIGGLRRLKVLALNNNS---ICGEIPTNISRCSTLIPIHPQNNQLVGKILS 155 (949)
Q Consensus 83 ~~l~~l~~L~~L~L~~n~l~~----~~p~~~~~l~~L~~L~Ls~N~---l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~ 155 (949)
+.+.....++.|+||+|.|.. .+...+.+.++|+..++|+=- +..++|+.+. ....
T Consensus 24 ~~~~~~~s~~~l~lsgnt~G~EAa~~i~~~L~~~~~L~~v~~sd~ftGR~~~Ei~e~L~-----------------~l~~ 86 (382)
T KOG1909|consen 24 EELEPMDSLTKLDLSGNTFGTEAARAIAKVLASKKELREVNLSDMFTGRLKDEIPEALK-----------------MLSK 86 (382)
T ss_pred HHhcccCceEEEeccCCchhHHHHHHHHHHHhhcccceeeehHhhhcCCcHHHHHHHHH-----------------HHHH
Confidence 345556667777777777753 234445566677777666531 2223443321 1123
Q ss_pred cccCCCCCcEEECCCCCCCCCCCCC----cCCCCCccEEeccccccCCCCCCcccCCCccccccccCcccccccccccCC
Q 039533 156 RFSSLSKTEILNLGSNHLTGSIPSS----LGNLSSIHTISLAYNNLDGTIPNSFGWFENLVFLSLAANNLSVVENKLTGE 231 (949)
Q Consensus 156 ~~~~L~~L~~L~Ls~N~l~~~~p~~----~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~l~~~ 231 (949)
++...++|++||||+|-|.-..+.. +.++..|++|.|.+|.+.-.--..++ ..|..|. .|+.
T Consensus 87 aL~~~~~L~~ldLSDNA~G~~g~~~l~~ll~s~~~L~eL~L~N~Glg~~ag~~l~--~al~~l~--~~kk---------- 152 (382)
T KOG1909|consen 87 ALLGCPKLQKLDLSDNAFGPKGIRGLEELLSSCTDLEELYLNNCGLGPEAGGRLG--RALFELA--VNKK---------- 152 (382)
T ss_pred HHhcCCceeEeeccccccCccchHHHHHHHHhccCHHHHhhhcCCCChhHHHHHH--HHHHHHH--HHhc----------
Confidence 3444456666666666665333322 23456666677766665411111111 0111111 0000
Q ss_pred CCChhhhccccccccccCCCCCCCCCCcchhccccccCcccEEEccCCCCCccCC----chhhcccccccEEEccCcccc
Q 039533 232 VPSLEKLQRLQHFTITSNSLGSGGNDDLSFLCSLTNATRLTWMHINSNNFGGLLP----GCISNLSKTIKTLFLNNNKIY 307 (949)
Q Consensus 232 ~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~~~~L~~L~L~~N~l~~~~p----~~~~~l~~~L~~L~L~~N~l~ 307 (949)
..+-+.|+.+...+|++...+...+ ...+...+.|+.+.++.|.+...-- ..+... ++|+.|||.+|-++
T Consensus 153 ---~~~~~~Lrv~i~~rNrlen~ga~~~--A~~~~~~~~leevr~~qN~I~~eG~~al~eal~~~-~~LevLdl~DNtft 226 (382)
T KOG1909|consen 153 ---AASKPKLRVFICGRNRLENGGATAL--AEAFQSHPTLEEVRLSQNGIRPEGVTALAEALEHC-PHLEVLDLRDNTFT 226 (382)
T ss_pred ---cCCCcceEEEEeeccccccccHHHH--HHHHHhccccceEEEecccccCchhHHHHHHHHhC-Ccceeeecccchhh
Confidence 0111234444444444444332211 1223334455555555555442111 122222 35666666666665
Q ss_pred CC----CCCCCCCCCcccEEEeecceecccCCCcc-----cccCCCCEEecCCccccc----ccCcccccccccceeecc
Q 039533 308 GS----IPAGIGNFVNLQRLDMWNNQLSGTIPPAI-----GELQNLKILGLNRNKLSG----NIPPSIGNLKMLLNLFLN 374 (949)
Q Consensus 308 ~~----~~~~~~~l~~L~~L~L~~N~l~~~~p~~~-----~~l~~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~L~L~ 374 (949)
.. +...+..+++|+.|+++++.+...-..+| ...++|+.|.|.+|.++. .+-..+...+.|..|+|+
T Consensus 227 ~egs~~LakaL~s~~~L~El~l~dcll~~~Ga~a~~~al~~~~p~L~vl~l~gNeIt~da~~~la~~~~ek~dL~kLnLn 306 (382)
T KOG1909|consen 227 LEGSVALAKALSSWPHLRELNLGDCLLENEGAIAFVDALKESAPSLEVLELAGNEITRDAALALAACMAEKPDLEKLNLN 306 (382)
T ss_pred hHHHHHHHHHhcccchheeecccccccccccHHHHHHHHhccCCCCceeccCcchhHHHHHHHHHHHHhcchhhHHhcCC
Confidence 32 33456667778888888887764333222 125778888888888763 223345567788888888
Q ss_pred cccc
Q 039533 375 DNFL 378 (949)
Q Consensus 375 ~N~l 378 (949)
+|.+
T Consensus 307 gN~l 310 (382)
T KOG1909|consen 307 GNRL 310 (382)
T ss_pred cccc
Confidence 8887
No 480
>KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms]
Probab=98.99 E-value=3.3e-12 Score=131.03 Aligned_cols=256 Identities=18% Similarity=0.248 Sum_probs=116.0
Q ss_pred cccccCCCCCcEEECCCCCCCC----CCCCCcCCCCCccEEeccccccCC----CCCCc-------ccCCCccccccccC
Q 039533 154 LSRFSSLSKTEILNLGSNHLTG----SIPSSLGNLSSIHTISLAYNNLDG----TIPNS-------FGWFENLVFLSLAA 218 (949)
Q Consensus 154 ~~~~~~L~~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~L~L~~N~l~~----~~p~~-------~~~l~~L~~L~Ls~ 218 (949)
......+..++.|+||+|.|.. .+...+.+.++|+..++|+= ++| .+|.. +...++|++||||+
T Consensus 23 ~~~~~~~~s~~~l~lsgnt~G~EAa~~i~~~L~~~~~L~~v~~sd~-ftGR~~~Ei~e~L~~l~~aL~~~~~L~~ldLSD 101 (382)
T KOG1909|consen 23 EEELEPMDSLTKLDLSGNTFGTEAARAIAKVLASKKELREVNLSDM-FTGRLKDEIPEALKMLSKALLGCPKLQKLDLSD 101 (382)
T ss_pred HHHhcccCceEEEeccCCchhHHHHHHHHHHHhhcccceeeehHhh-hcCCcHHHHHHHHHHHHHHHhcCCceeEeeccc
Confidence 3445667778888888888862 23445666777888777642 332 23332 22334555555555
Q ss_pred cccccccccccCCCCChhhhccccccccccCCCCCCCCCCcchhccccccCcccEEEccCCCCCccCCchhhcccccccE
Q 039533 219 NNLSVVENKLTGEVPSLEKLQRLQHFTITSNSLGSGGNDDLSFLCSLTNATRLTWMHINSNNFGGLLPGCISNLSKTIKT 298 (949)
Q Consensus 219 N~l~~~~~~l~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~~~~L~~L~L~~N~l~~~~p~~~~~l~~~L~~ 298 (949)
|.+.. ....+.-.-+.++..|++|.|.+|.++..+...+.- .|..|+ .|+.. .-+..|++
T Consensus 102 NA~G~--~g~~~l~~ll~s~~~L~eL~L~N~Glg~~ag~~l~~--------al~~l~--~~kk~--------~~~~~Lrv 161 (382)
T KOG1909|consen 102 NAFGP--KGIRGLEELLSSCTDLEELYLNNCGLGPEAGGRLGR--------ALFELA--VNKKA--------ASKPKLRV 161 (382)
T ss_pred cccCc--cchHHHHHHHHhccCHHHHhhhcCCCChhHHHHHHH--------HHHHHH--HHhcc--------CCCcceEE
Confidence 55431 110000001233444444444444443322211100 000000 00000 00123555
Q ss_pred EEccCccccCC----CCCCCCCCCcccEEEeecceecc----cCCCcccccCCCCEEecCCcccccc----cCccccccc
Q 039533 299 LFLNNNKIYGS----IPAGIGNFVNLQRLDMWNNQLSG----TIPPAIGELQNLKILGLNRNKLSGN----IPPSIGNLK 366 (949)
Q Consensus 299 L~L~~N~l~~~----~~~~~~~l~~L~~L~L~~N~l~~----~~p~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~ 366 (949)
+..++|++... +...|...+.|+.+.++.|.|.. .+-..|..+++|+.|||..|-|+.. +...+..++
T Consensus 162 ~i~~rNrlen~ga~~~A~~~~~~~~leevr~~qN~I~~eG~~al~eal~~~~~LevLdl~DNtft~egs~~LakaL~s~~ 241 (382)
T KOG1909|consen 162 FICGRNRLENGGATALAEAFQSHPTLEEVRLSQNGIRPEGVTALAEALEHCPHLEVLDLRDNTFTLEGSVALAKALSSWP 241 (382)
T ss_pred EEeeccccccccHHHHHHHHHhccccceEEEecccccCchhHHHHHHHHhCCcceeeecccchhhhHHHHHHHHHhcccc
Confidence 55555555421 11224444556666666665541 1112345556666666666655521 223344455
Q ss_pred ccceeecccccccccCCCCC-----CCCCCCcEEEeeCccccCCCCCcccCCcccceeeccCCCccCCCCcccccccccc
Q 039533 367 MLLNLFLNDNFLEVSIPSSL-----GQCESLIEINLSNNNLSGTIPPQFFSLSSLSISLDWSRNKLTGSLPIEVGKLKIL 441 (949)
Q Consensus 367 ~L~~L~L~~N~l~~~~p~~~-----~~l~~L~~L~l~~N~l~~~~p~~~~~l~~l~~~L~ls~N~l~~~~p~~~~~l~~L 441 (949)
+|+.|+++++.+...-..+| ...++|++|.|.+|.++..-- ..+..++...+.|
T Consensus 242 ~L~El~l~dcll~~~Ga~a~~~al~~~~p~L~vl~l~gNeIt~da~---------------------~~la~~~~ek~dL 300 (382)
T KOG1909|consen 242 HLRELNLGDCLLENEGAIAFVDALKESAPSLEVLELAGNEITRDAA---------------------LALAACMAEKPDL 300 (382)
T ss_pred hheeecccccccccccHHHHHHHHhccCCCCceeccCcchhHHHHH---------------------HHHHHHHhcchhh
Confidence 55555555555543221111 113455555555555541000 0122334456667
Q ss_pred ceeeeccccc
Q 039533 442 EFLYVYENRL 451 (949)
Q Consensus 442 ~~L~Ls~N~l 451 (949)
+.|+|++|++
T Consensus 301 ~kLnLngN~l 310 (382)
T KOG1909|consen 301 EKLNLNGNRL 310 (382)
T ss_pred HHhcCCcccc
Confidence 7777777777
No 481
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=98.98 E-value=5.6e-09 Score=108.52 Aligned_cols=145 Identities=21% Similarity=0.181 Sum_probs=108.6
Q ss_pred CeeeeecCceEEEEEEcCCCEEEEEEEEecCCC-cchHHHHHHHHHHHhcCCC--cceeEEeeeecccccCCccceeEee
Q 039533 632 NLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHH-GASRSFIAECKALKSIRHR--NLVKVLTACLGADYRGNDFKASVYE 708 (949)
Q Consensus 632 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~--niv~~~~~~~~~~~~~~~~~~lv~e 708 (949)
+.++.|..+.||+++.. +|+.+++|+...... .....+.+|+++++.+.+. .+.+++.+..... .....++|||
T Consensus 4 ~~l~~G~~n~~~~v~~~-~g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~--~~~~~~~v~e 80 (223)
T cd05154 4 RQLSGGQSNLTYLLTAG-GGRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPS--VLGTPFYVME 80 (223)
T ss_pred eecCCCccceEEEEEec-CCcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCC--ccCCceEEEE
Confidence 57899999999999886 357899999764332 1345788999999999753 4577776654321 1124689999
Q ss_pred eccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCC------------------------------
Q 039533 709 FMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDC------------------------------ 758 (949)
Q Consensus 709 ~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~------------------------------ 758 (949)
|++|.++.+.+. ...++..+...++.+++++|++||+..
T Consensus 81 ~i~G~~l~~~~~-----------~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (223)
T cd05154 81 RVDGRVLRDRLL-----------RPELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDAS 149 (223)
T ss_pred EeCCEecCCCCC-----------CCCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhh
Confidence 999988877653 023667777788888888888888421
Q ss_pred -----------------------CCCeEecCCCCCCeeecC--CCceEEeeccccee
Q 039533 759 -----------------------QPVTAHCDLKPSNVLLDD--YMTARVGDFGLARI 790 (949)
Q Consensus 759 -----------------------~~~ivHrDlkp~NIll~~--~~~~kl~DfG~a~~ 790 (949)
...++|+|++|.||+++. ++.+.|+||+.+..
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~ 206 (223)
T cd05154 150 RTDEPPAMERLLRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATL 206 (223)
T ss_pred cccccHHHHHHHHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEecccccc
Confidence 246799999999999998 66789999998764
No 482
>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]
Probab=98.97 E-value=1.1e-08 Score=110.87 Aligned_cols=181 Identities=18% Similarity=0.177 Sum_probs=137.7
Q ss_pred cCceEEEEEEcCCCEEEEEEEEecCCCcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCccceeEeeeccC-CChh
Q 039533 638 SFGSVYKGIIDEGRTTIAVKVFNLQHHGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFKASVYEFMHY-GSLE 716 (949)
Q Consensus 638 ~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~-gsL~ 716 (949)
...+.|++....+|..|++|+++............-++.++++.|+|||++.+++....+ ++...++||+|.++ ++|.
T Consensus 288 ~~~Ttyk~~s~~DG~~YvLkRlhg~r~~~~nk~t~lve~wkkl~h~NvV~frevf~t~tF-~D~SlvlvYDYyP~s~TL~ 366 (655)
T KOG3741|consen 288 FSITTYKATSNVDGNAYVLKRLHGDRDQSTNKDTSLVEAWKKLCHTNVVPFREVFLTYTF-GDLSLVLVYDYYPSSPTLY 366 (655)
T ss_pred ccceeEeeeeccCCceeeeeeeccccccCcccchHHHHHHHHhccCceeehhhhhhhhcc-CcceEEEEEecCCCCchHH
Confidence 446899999999999999999954443334445567889999999999999998874443 34468899999976 5777
Q ss_pred hhcCCCCCCC-----ccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEeecccceec
Q 039533 717 EWLHPFTGED-----EIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVGDFGLARIL 791 (949)
Q Consensus 717 ~~l~~~~~~~-----~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~ 791 (949)
++.-...... .....+...++...+.++.|+..||.++|+. |..-+-|.|.+|+++.+.+++|+..|.....
T Consensus 367 d~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHss---GLAck~L~~~kIlv~G~~RIriS~C~i~Dvl 443 (655)
T KOG3741|consen 367 DLYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSS---GLACKTLDLKKILVTGKMRIRISGCGIMDVL 443 (655)
T ss_pred HHHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhc---CceeecccHhHeEeeCcceEEEecccceeee
Confidence 7543222111 1234556788899999999999999999988 8999999999999999999999988887766
Q ss_pred CCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCC
Q 039533 792 SPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKK 841 (949)
Q Consensus 792 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~ 841 (949)
..+.... +.+ -.+-|.=.||.++..|.||..
T Consensus 444 ~~d~~~~----------------le~---~Qq~D~~~lG~ll~aLAt~~~ 474 (655)
T KOG3741|consen 444 QEDPTEP----------------LES---QQQNDLRDLGLLLLALATGTE 474 (655)
T ss_pred cCCCCcc----------------hhH---HhhhhHHHHHHHHHHHhhccc
Confidence 5544111 111 135688899999999999954
No 483
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=98.97 E-value=1.2e-10 Score=112.89 Aligned_cols=109 Identities=25% Similarity=0.354 Sum_probs=26.7
Q ss_pred ccCcccCcEEeeccccccCcCCCCCC-CCccceeecCCCccccccccccccCCCCCcEEECCCCCCCCCCCCCc-CCCCC
Q 039533 109 IGGLRRLKVLALNNNSICGEIPTNIS-RCSTLIPIHPQNNQLVGKILSRFSSLSKTEILNLGSNHLTGSIPSSL-GNLSS 186 (949)
Q Consensus 109 ~~~l~~L~~L~Ls~N~l~~~~p~~~~-~l~~L~~L~l~~n~l~~~~~~~~~~L~~L~~L~Ls~N~l~~~~p~~~-~~l~~ 186 (949)
+.+..+++.|+|++|.|+ .| +.++ .+.+|+.|++++|.|+... .+..+++|+.|+|++|+|+ .+++.+ ..+++
T Consensus 15 ~~n~~~~~~L~L~~n~I~-~I-e~L~~~l~~L~~L~Ls~N~I~~l~--~l~~L~~L~~L~L~~N~I~-~i~~~l~~~lp~ 89 (175)
T PF14580_consen 15 YNNPVKLRELNLRGNQIS-TI-ENLGATLDKLEVLDLSNNQITKLE--GLPGLPRLKTLDLSNNRIS-SISEGLDKNLPN 89 (175)
T ss_dssp -----------------------S--TT-TT--EEE-TTS--S--T--T----TT--EEE--SS----S-CHHHHHH-TT
T ss_pred cccccccccccccccccc-cc-cchhhhhcCCCEEECCCCCCcccc--CccChhhhhhcccCCCCCC-ccccchHHhCCc
Confidence 455567788888888886 33 2444 4566666666666665432 3555566666666666665 232223 24556
Q ss_pred ccEEeccccccCCCC-CCcccCCCccccccccCcccc
Q 039533 187 IHTISLAYNNLDGTI-PNSFGWFENLVFLSLAANNLS 222 (949)
Q Consensus 187 L~~L~L~~N~l~~~~-p~~~~~l~~L~~L~Ls~N~l~ 222 (949)
|++|+|++|+|...- -..+..+++|+.|+|.+|.++
T Consensus 90 L~~L~L~~N~I~~l~~l~~L~~l~~L~~L~L~~NPv~ 126 (175)
T PF14580_consen 90 LQELYLSNNKISDLNELEPLSSLPKLRVLSLEGNPVC 126 (175)
T ss_dssp --EEE-TTS---SCCCCGGGGG-TT--EEE-TT-GGG
T ss_pred CCEEECcCCcCCChHHhHHHHcCCCcceeeccCCccc
Confidence 666666666655221 123444555555555555544
No 484
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=98.97 E-value=1.1e-10 Score=123.27 Aligned_cols=216 Identities=20% Similarity=0.183 Sum_probs=126.1
Q ss_pred CCCCCCceeeccCceeccccC--CcccCcccCcEEeeccccccCc--CCCCCCCCccceeecCCCcccccccccc-ccCC
Q 039533 86 GNLSFLKQLYLQVNSFTHEIP--SEIGGLRRLKVLALNNNSICGE--IPTNISRCSTLIPIHPQNNQLVGKILSR-FSSL 160 (949)
Q Consensus 86 ~~l~~L~~L~L~~n~l~~~~p--~~~~~l~~L~~L~Ls~N~l~~~--~p~~~~~l~~L~~L~l~~n~l~~~~~~~-~~~L 160 (949)
.++..|+.+.|.+..... .+ .....|++++.||||+|-+..- +-.....|++|+.|+++.|++....... -..+
T Consensus 118 sn~kkL~~IsLdn~~V~~-~~~~~~~k~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~s~~~~~l 196 (505)
T KOG3207|consen 118 SNLKKLREISLDNYRVED-AGIEEYSKILPNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFISSNTTLLL 196 (505)
T ss_pred hhHHhhhheeecCccccc-cchhhhhhhCCcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCccccchhhh
Confidence 356666666666665542 22 2445566777777777665421 1222345666667777777665333222 1255
Q ss_pred CCCcEEECCCCCCCCC-CCCCcCCCCCccEEeccccccCCCCCCcccCCCccccccccCcccccccccccCCCCChhhhc
Q 039533 161 SKTEILNLGSNHLTGS-IPSSLGNLSSIHTISLAYNNLDGTIPNSFGWFENLVFLSLAANNLSVVENKLTGEVPSLEKLQ 239 (949)
Q Consensus 161 ~~L~~L~Ls~N~l~~~-~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~l~~~~~~l~~l~ 239 (949)
++|+.|.|+.|.|+.. +-..+..+++|+.|+|.+|..-+.-.....-++.|++|||++|++-..+ ..+....++
T Consensus 197 ~~lK~L~l~~CGls~k~V~~~~~~fPsl~~L~L~~N~~~~~~~~~~~i~~~L~~LdLs~N~li~~~-----~~~~~~~l~ 271 (505)
T KOG3207|consen 197 SHLKQLVLNSCGLSWKDVQWILLTFPSLEVLYLEANEIILIKATSTKILQTLQELDLSNNNLIDFD-----QGYKVGTLP 271 (505)
T ss_pred hhhheEEeccCCCCHHHHHHHHHhCCcHHHhhhhcccccceecchhhhhhHHhhccccCCcccccc-----ccccccccc
Confidence 6677777777777621 1122335567777777777533344445555677777777777665433 234455666
Q ss_pred cccccccccCCCCCCCCCCcchhccccccCcccEEEccCCCCCccCC-chhhcccccccEEEccCccccC
Q 039533 240 RLQHFTITSNSLGSGGNDDLSFLCSLTNATRLTWMHINSNNFGGLLP-GCISNLSKTIKTLFLNNNKIYG 308 (949)
Q Consensus 240 ~L~~L~l~~N~l~~~~~~~~~~~~~l~~~~~L~~L~L~~N~l~~~~p-~~~~~l~~~L~~L~L~~N~l~~ 308 (949)
.|..|+++.+.+.+....+....+-....++|++|+++.|++...-. ..+..+ ++|+.|....|.|+.
T Consensus 272 ~L~~Lnls~tgi~si~~~d~~s~~kt~~f~kL~~L~i~~N~I~~w~sl~~l~~l-~nlk~l~~~~n~ln~ 340 (505)
T KOG3207|consen 272 GLNQLNLSSTGIASIAEPDVESLDKTHTFPKLEYLNISENNIRDWRSLNHLRTL-ENLKHLRITLNYLNK 340 (505)
T ss_pred chhhhhccccCcchhcCCCccchhhhcccccceeeecccCccccccccchhhcc-chhhhhhcccccccc
Confidence 77777777777766654444444445667788888888888743211 122222 457778887888864
No 485
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=98.93 E-value=1.2e-08 Score=100.96 Aligned_cols=127 Identities=22% Similarity=0.200 Sum_probs=83.8
Q ss_pred eEEEEEEcCCCEEEEEEEEecCCC-------------c-------------chHHHHHHHHHHHhcCCC--cceeEEeee
Q 039533 641 SVYKGIIDEGRTTIAVKVFNLQHH-------------G-------------ASRSFIAECKALKSIRHR--NLVKVLTAC 692 (949)
Q Consensus 641 ~Vy~~~~~~~~~~vavK~~~~~~~-------------~-------------~~~~~~~E~~~l~~l~h~--niv~~~~~~ 692 (949)
.||.|... ++..+|||+++.... . ......+|++.|.++... ++++.+++.
T Consensus 1 ~Vy~~~~~-~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~~ 79 (188)
T PF01163_consen 1 DVYHAIDP-DGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDYN 79 (188)
T ss_dssp EEEEEEEC-TTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEEE
T ss_pred CEEEEECC-CCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEEe
Confidence 38999986 678999999863210 0 013567899999999755 577777552
Q ss_pred ecccccCCccceeEeeecc--CCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHH-hhCCCCCeEecCCCC
Q 039533 693 LGADYRGNDFKASVYEFMH--YGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYL-HHDCQPVTAHCDLKP 769 (949)
Q Consensus 693 ~~~~~~~~~~~~lv~e~~~--~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~L-H~~~~~~ivHrDlkp 769 (949)
...+||||++ |..+..+.. ..++......++.+++..+..+ |.. ||+|||+.+
T Consensus 80 ---------~~~ivME~I~~~G~~~~~l~~------------~~~~~~~~~~~~~~il~~~~~~~~~~---givHGDLs~ 135 (188)
T PF01163_consen 80 ---------RNVIVMEYIGEDGVPLPRLKD------------VDLSPEEPKELLEEILEEIIKMLHKA---GIVHGDLSE 135 (188)
T ss_dssp ---------TTEEEEE--EETTEEGGCHHH------------CGGGGSTHHHHHHHHHHHHHHHHHCT---TEEESS-ST
T ss_pred ---------CCEEEEEecCCCccchhhHHh------------ccccchhHHHHHHHHHHHHHHHHHhc---CceecCCCh
Confidence 4589999998 655544432 1111234566788888866664 554 999999999
Q ss_pred CCeeecCCCceEEeecccceecCC
Q 039533 770 SNVLLDDYMTARVGDFGLARILSP 793 (949)
Q Consensus 770 ~NIll~~~~~~kl~DfG~a~~~~~ 793 (949)
.||+++++ .+.++|||.+.....
T Consensus 136 ~NIlv~~~-~~~iIDf~qav~~~~ 158 (188)
T PF01163_consen 136 YNILVDDG-KVYIIDFGQAVDSSH 158 (188)
T ss_dssp TSEEEETT-CEEE--GTTEEETTS
T ss_pred hhEEeecc-eEEEEecCcceecCC
Confidence 99999987 999999999876543
No 486
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=98.89 E-value=4e-10 Score=131.16 Aligned_cols=207 Identities=22% Similarity=0.265 Sum_probs=145.1
Q ss_pred HHhcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCCc---chHHHHHHHHHHHhcCCCcceeEEeeeecccccC
Q 039533 623 NATSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHG---ASRSFIAECKALKSIRHRNLVKVLTACLGADYRG 699 (949)
Q Consensus 623 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 699 (949)
...+++.+.+-+-.|.++.++.+.-...+...+.|+......- ..+....+-.+.-...||-+++...- +.-
T Consensus 801 sS~d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s-----~~~ 875 (1205)
T KOG0606|consen 801 SSPDGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPS-----FPC 875 (1205)
T ss_pred CCCccceecccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccCCCCceecccCC-----CCC
Confidence 4556788888899999999998887766655556554322211 11112222222222234555543322 223
Q ss_pred CccceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCc
Q 039533 700 NDFKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMT 779 (949)
Q Consensus 700 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~ 779 (949)
....++|++|+.+++|...++.. +..+.+.++.....++.+.+|||+. .+.|||++|.|++...+++
T Consensus 876 rsP~~L~~~~~~~~~~~Skl~~~----------~~~saepaRs~i~~~vqs~e~L~s~---~r~h~~~~p~~~l~~~~gh 942 (1205)
T KOG0606|consen 876 RSPLPLVGHYLNGGDLPSKLHNS----------GCLSAEPARSPILERVQSLESLHSS---LRKHRDLKPDSLLIAYDGH 942 (1205)
T ss_pred CCCcchhhHHhccCCchhhhhcC----------CCcccccccchhHHHHhhhhccccc---hhhcccccccchhhcccCC
Confidence 34678999999999999998732 2345555666778889999999976 6899999999999999999
Q ss_pred eEEeecccceecCCC---------------------C--------CccccccccCccCccCccccCCCccCCccchHHHH
Q 039533 780 ARVGDFGLARILSPD---------------------H--------TQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYG 830 (949)
Q Consensus 780 ~kl~DfG~a~~~~~~---------------------~--------~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG 830 (949)
.+++|||.....+-- . .........||+.|.|||...+......+|+|+.|
T Consensus 943 ~~l~~~~t~~~vg~~~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g 1022 (1205)
T KOG0606|consen 943 RPLTDFGTLSKVGLIPPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSG 1022 (1205)
T ss_pred cccCccccccccccccCcCCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhh
Confidence 999999843322100 0 00112345699999999999999999999999999
Q ss_pred HHHHHHHhCCCCCcccc
Q 039533 831 ILLLELVIGKKPIDIMF 847 (949)
Q Consensus 831 vvl~elltg~~Pf~~~~ 847 (949)
++++|.++|.+||....
T Consensus 1023 ~~l~e~l~g~pp~na~t 1039 (1205)
T KOG0606|consen 1023 VCLFEVLTGIPPFNAET 1039 (1205)
T ss_pred hhhhhhhcCCCCCCCcc
Confidence 99999999999997543
No 487
>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]
Probab=98.88 E-value=1.4e-08 Score=95.88 Aligned_cols=143 Identities=19% Similarity=0.180 Sum_probs=98.2
Q ss_pred CCCeeeeecCceEEEEEEcCCCEEEEEEEEecCC-Cc-------chHHHHHHHHHHHhcCCCcceeEEeeeecccccCCc
Q 039533 630 SANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQH-HG-------ASRSFIAECKALKSIRHRNLVKVLTACLGADYRGND 701 (949)
Q Consensus 630 ~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~-------~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 701 (949)
....+-+|+-+.|+++.+. |+..+||.--... .. ..++..+|++.+.++.--.|.-..-++.+..
T Consensus 11 ~l~likQGAEArv~~~~~~--Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~----- 83 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRGSFS--GEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTY----- 83 (229)
T ss_pred cceeeeccceeeEeeeccC--CceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecC-----
Confidence 5678999999999999986 6777777532211 11 1257789999999985333222222222222
Q ss_pred cceeEeeeccC-CChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCC--
Q 039533 702 FKASVYEFMHY-GSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYM-- 778 (949)
Q Consensus 702 ~~~lv~e~~~~-gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~-- 778 (949)
.-.++|||+++ .++.+++..... ...........+.+|-+.+.-||.. +|+||||..+||++..++
T Consensus 84 ~~~i~ME~~~g~~~vk~~i~~~~~--------~~~~d~~~~~~~~~iG~~igklH~n---diiHGDLTTSNill~~~~~~ 152 (229)
T KOG3087|consen 84 GGQIYMEFIDGASTVKDFILSTME--------DESEDEGLAELARRIGELIGKLHDN---DIIHGDLTTSNILLRSDGNQ 152 (229)
T ss_pred CCeEEEEeccchhHHHHHHHHHcc--------CcccchhHHHHHHHHHHHHHHhhhC---CeecccccccceEEecCCCc
Confidence 45899999987 477777752211 1112223367899999999999977 899999999999996554
Q ss_pred -ceEEeeccccee
Q 039533 779 -TARVGDFGLARI 790 (949)
Q Consensus 779 -~~kl~DfG~a~~ 790 (949)
.+.++|||++..
T Consensus 153 ~~~~lIdfgls~~ 165 (229)
T KOG3087|consen 153 ITPILIDFGLSSV 165 (229)
T ss_pred CceEEEeecchhc
Confidence 458999999864
No 488
>KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms]
Probab=98.85 E-value=2.1e-09 Score=130.16 Aligned_cols=126 Identities=21% Similarity=0.270 Sum_probs=60.5
Q ss_pred CCCceeeccCceeccccCCcccCcccCcEEeecccc--ccCcCCCCCCCCccceeecCCCccccccccccccCCCCCcEE
Q 039533 89 SFLKQLYLQVNSFTHEIPSEIGGLRRLKVLALNNNS--ICGEIPTNISRCSTLIPIHPQNNQLVGKILSRFSSLSKTEIL 166 (949)
Q Consensus 89 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~--l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~L~~L~~L 166 (949)
...+...+-+|.+. .++.... +++|+.|-+..|. +.-..++.|..++.|+.|||++|.=.+..|..++.|-+|++|
T Consensus 523 ~~~rr~s~~~~~~~-~~~~~~~-~~~L~tLll~~n~~~l~~is~~ff~~m~~LrVLDLs~~~~l~~LP~~I~~Li~LryL 600 (889)
T KOG4658|consen 523 NSVRRMSLMNNKIE-HIAGSSE-NPKLRTLLLQRNSDWLLEISGEFFRSLPLLRVLDLSGNSSLSKLPSSIGELVHLRYL 600 (889)
T ss_pred hheeEEEEeccchh-hccCCCC-CCccceEEEeecchhhhhcCHHHHhhCcceEEEECCCCCccCcCChHHhhhhhhhcc
Confidence 44455555555544 2222221 2245555555553 221112224445555555555444444445555555555555
Q ss_pred ECCCCCCCCCCCCCcCCCCCccEEeccccccCCCCCCcccCCCcccccccc
Q 039533 167 NLGSNHLTGSIPSSLGNLSSIHTISLAYNNLDGTIPNSFGWFENLVFLSLA 217 (949)
Q Consensus 167 ~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls 217 (949)
+|++..++ .+|..+++|..|.+|++.++.-...+|.....+++|++|.+-
T Consensus 601 ~L~~t~I~-~LP~~l~~Lk~L~~Lnl~~~~~l~~~~~i~~~L~~Lr~L~l~ 650 (889)
T KOG4658|consen 601 DLSDTGIS-HLPSGLGNLKKLIYLNLEVTGRLESIPGILLELQSLRVLRLP 650 (889)
T ss_pred cccCCCcc-ccchHHHHHHhhheeccccccccccccchhhhcccccEEEee
Confidence 55555555 555555555555555555554443444444455555555554
No 489
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.79 E-value=4.8e-09 Score=83.64 Aligned_cols=14 Identities=50% Similarity=0.717 Sum_probs=5.0
Q ss_pred cCCCCEEecCCccc
Q 039533 341 LQNLKILGLNRNKL 354 (949)
Q Consensus 341 l~~L~~L~Ls~N~l 354 (949)
+++|++|++++|++
T Consensus 24 l~~L~~L~l~~N~l 37 (61)
T PF13855_consen 24 LPNLETLDLSNNNL 37 (61)
T ss_dssp GTTESEEEETSSSE
T ss_pred CCCCCEeEccCCcc
Confidence 33333333333333
No 490
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.79 E-value=5.8e-09 Score=83.14 Aligned_cols=61 Identities=39% Similarity=0.451 Sum_probs=55.4
Q ss_pred CCCCEEecCCcccccccCcccccccccceeecccccccccCCCCCCCCCCCcEEEeeCccc
Q 039533 342 QNLKILGLNRNKLSGNIPPSIGNLKMLLNLFLNDNFLEVSIPSSLGQCESLIEINLSNNNL 402 (949)
Q Consensus 342 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l 402 (949)
++|++|++++|+|+...+..|.++++|++|++++|.++...|++|.++++|++|++++|+|
T Consensus 1 p~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~l 61 (61)
T PF13855_consen 1 PNLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNNL 61 (61)
T ss_dssp TTESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSSB
T ss_pred CcCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCcC
Confidence 5789999999999977778899999999999999999988889999999999999999975
No 491
>KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms]
Probab=98.77 E-value=5.5e-09 Score=126.65 Aligned_cols=294 Identities=24% Similarity=0.237 Sum_probs=160.5
Q ss_pred CCceeeccCce--eccccCCcccCcccCcEEeeccccccCcCCCCCCCCccceeecCCCccccccccccccCCCCCcEEE
Q 039533 90 FLKQLYLQVNS--FTHEIPSEIGGLRRLKVLALNNNSICGEIPTNISRCSTLIPIHPQNNQLVGKILSRFSSLSKTEILN 167 (949)
Q Consensus 90 ~L~~L~L~~n~--l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~L~~L~~L~ 167 (949)
.|++|-+..|. +....++.|..++.|++||||+|.=-+.+|..++.|-+|++|++++..+. ..|..+.+|.+|.+|+
T Consensus 546 ~L~tLll~~n~~~l~~is~~ff~~m~~LrVLDLs~~~~l~~LP~~I~~Li~LryL~L~~t~I~-~LP~~l~~Lk~L~~Ln 624 (889)
T KOG4658|consen 546 KLRTLLLQRNSDWLLEISGEFFRSLPLLRVLDLSGNSSLSKLPSSIGELVHLRYLDLSDTGIS-HLPSGLGNLKKLIYLN 624 (889)
T ss_pred ccceEEEeecchhhhhcCHHHHhhCcceEEEECCCCCccCcCChHHhhhhhhhcccccCCCcc-ccchHHHHHHhhheec
Confidence 57777777775 44333344677888888888877655678888888888888888888876 6677788888888888
Q ss_pred CCCCCCCCCCCCCcCCCCCccEEeccccccC--CCCCCcccCCCccccccccCcccccccccccCCCCChhhhcccc---
Q 039533 168 LGSNHLTGSIPSSLGNLSSIHTISLAYNNLD--GTIPNSFGWFENLVFLSLAANNLSVVENKLTGEVPSLEKLQRLQ--- 242 (949)
Q Consensus 168 Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~--~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~l~~~~~~l~~l~~L~--- 242 (949)
+..+.-...+|..+..+++|++|.|..-... ...-..+.++.+|+.+.........+. .+..+..|.
T Consensus 625 l~~~~~l~~~~~i~~~L~~Lr~L~l~~s~~~~~~~~l~el~~Le~L~~ls~~~~s~~~~e--------~l~~~~~L~~~~ 696 (889)
T KOG4658|consen 625 LEVTGRLESIPGILLELQSLRVLRLPRSALSNDKLLLKELENLEHLENLSITISSVLLLE--------DLLGMTRLRSLL 696 (889)
T ss_pred cccccccccccchhhhcccccEEEeeccccccchhhHHhhhcccchhhheeecchhHhHh--------hhhhhHHHHHHh
Confidence 8877766566666666888888877665422 222233344444444444322210000 011111111
Q ss_pred -ccccccCCCCCCCCCCcchhccccccCcccEEEccCCCCCccCCchhhccc-----ccccEEEccCccccCCCCCCCCC
Q 039533 243 -HFTITSNSLGSGGNDDLSFLCSLTNATRLTWMHINSNNFGGLLPGCISNLS-----KTIKTLFLNNNKIYGSIPAGIGN 316 (949)
Q Consensus 243 -~L~l~~N~l~~~~~~~~~~~~~l~~~~~L~~L~L~~N~l~~~~p~~~~~l~-----~~L~~L~L~~N~l~~~~~~~~~~ 316 (949)
.+.+..+.. -....++..+.+|+.|.+.++.+......+..... +++..+...++... ..+.+.-.
T Consensus 697 ~~l~~~~~~~-------~~~~~~~~~l~~L~~L~i~~~~~~e~~~~~~~~~~~~~~f~~l~~~~~~~~~~~-r~l~~~~f 768 (889)
T KOG4658|consen 697 QSLSIEGCSK-------RTLISSLGSLGNLEELSILDCGISEIVIEWEESLIVLLCFPNLSKVSILNCHML-RDLTWLLF 768 (889)
T ss_pred Hhhhhccccc-------ceeecccccccCcceEEEEcCCCchhhcccccccchhhhHHHHHHHHhhccccc-cccchhhc
Confidence 222211111 11233455666777777777766533222211100 01111111111111 12333344
Q ss_pred CCcccEEEeecceecccCCCcccccCCCCEEecCCcccccc-cCcccccccccceeecccccccccCCC---CCCCCCCC
Q 039533 317 FVNLQRLDMWNNQLSGTIPPAIGELQNLKILGLNRNKLSGN-IPPSIGNLKMLLNLFLNDNFLEVSIPS---SLGQCESL 392 (949)
Q Consensus 317 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~-~p~~~~~l~~L~~L~L~~N~l~~~~p~---~~~~l~~L 392 (949)
.++|+.|.+........+.+....+..++.+-+..+.+.+. .-...+.++++..+.+..=.+....-+ ..+.+|.+
T Consensus 769 ~~~L~~l~l~~~~~~e~~i~~~k~~~~l~~~i~~f~~~~~l~~~~~l~~l~~i~~~~l~~~~l~~~~ve~~p~l~~~P~~ 848 (889)
T KOG4658|consen 769 APHLTSLSLVSCRLLEDIIPKLKALLELKELILPFNKLEGLRMLCSLGGLPQLYWLPLSFLKLEELIVEECPKLGKLPLL 848 (889)
T ss_pred cCcccEEEEecccccccCCCHHHHhhhcccEEecccccccceeeecCCCCceeEecccCccchhheehhcCcccccCccc
Confidence 57888888887776656666666666677677777777765 344455555555555544333211111 13445666
Q ss_pred cEEEeeCc
Q 039533 393 IEINLSNN 400 (949)
Q Consensus 393 ~~L~l~~N 400 (949)
..+.+.++
T Consensus 849 ~~~~i~~~ 856 (889)
T KOG4658|consen 849 STLTIVGC 856 (889)
T ss_pred cccceecc
Confidence 66666664
No 492
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=98.73 E-value=1.8e-07 Score=98.37 Aligned_cols=147 Identities=12% Similarity=0.014 Sum_probs=101.7
Q ss_pred CCeeeeecCceEEEEEEcCCCEEEEEEEEecCCCc-----------chHHHHHHHHHHHhcCCCc--ceeEEeeeecccc
Q 039533 631 ANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHG-----------ASRSFIAECKALKSIRHRN--LVKVLTACLGADY 697 (949)
Q Consensus 631 ~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~-----------~~~~~~~E~~~l~~l~h~n--iv~~~~~~~~~~~ 697 (949)
.+.+-+.....|++++.. |+.+.||+....... ....+.+|...+.++...+ +++.+++......
T Consensus 27 ~e~v~~~~~rrvvr~~~~--g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~ 104 (268)
T PRK15123 27 GEVFRELEGRRTLRFELA--GKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSN 104 (268)
T ss_pred CcEEecCCCceEEEEEEC--CEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCC
Confidence 355555555567787664 788999987433211 1124789999998884333 3344445422111
Q ss_pred cCCccceeEeeeccCC-ChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecC
Q 039533 698 RGNDFKASVYEFMHYG-SLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDD 776 (949)
Q Consensus 698 ~~~~~~~lv~e~~~~g-sL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~ 776 (949)
......++|||++++. +|.+++.... ....+...+..++.+++..++-||.. ||+|||++++|||++.
T Consensus 105 ~~~~~s~LVte~l~~~~sL~~~~~~~~--------~~~~~~~~~~~ll~~la~~i~~LH~~---Gi~HgDL~~~NiLl~~ 173 (268)
T PRK15123 105 PATRTSFIITEDLAPTISLEDYCADWA--------TNPPDPRLKRMLIKRVATMVRDMHAA---GINHRDCYICHFLLHL 173 (268)
T ss_pred CccceeEEEEeeCCCCccHHHHHHhhc--------ccCCCHHHHHHHHHHHHHHHHHHHHC---cCccCCCChhhEEEec
Confidence 1123468999999886 8988874210 12345667788999999999999987 9999999999999975
Q ss_pred -------CCceEEeeccccee
Q 039533 777 -------YMTARVGDFGLARI 790 (949)
Q Consensus 777 -------~~~~kl~DfG~a~~ 790 (949)
++.+.++||+.++.
T Consensus 174 ~~~~~~~~~~~~LIDl~r~~~ 194 (268)
T PRK15123 174 PFPGREEDLKLSVIDLHRAQI 194 (268)
T ss_pred cccCCCCCceEEEEECCcccc
Confidence 46899999998754
No 493
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=98.70 E-value=1.2e-07 Score=95.66 Aligned_cols=137 Identities=21% Similarity=0.153 Sum_probs=97.2
Q ss_pred CCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCC------------------c----chHHHHHHHHHHHhcCCC-
Q 039533 627 GFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHH------------------G----ASRSFIAECKALKSIRHR- 683 (949)
Q Consensus 627 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~------------------~----~~~~~~~E~~~l~~l~h~- 683 (949)
=+.+++.||.|--+.||.|.+. .|.++|||.-+.... . ......+|.++|+++...
T Consensus 92 ve~iG~~IGvGKEsdVY~~~~~-~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G 170 (304)
T COG0478 92 VEAIGTKIGVGKESDVYVAIDP-KGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEG 170 (304)
T ss_pred HHhhccccccCccceEEEEECC-CCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcC
Confidence 3566789999999999999987 688999998642110 0 013467899999999654
Q ss_pred -cceeEEeeeecccccCCccceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCe
Q 039533 684 -NLVKVLTACLGADYRGNDFKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVT 762 (949)
Q Consensus 684 -niv~~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~i 762 (949)
.|++.+++ +...+||||++|-.|...- ++......|+..|++-+..+-.. ||
T Consensus 171 ~~VP~P~~~---------nRHaVvMe~ieG~eL~~~r---------------~~~en~~~il~~il~~~~~~~~~---Gi 223 (304)
T COG0478 171 VKVPKPIAW---------NRHAVVMEYIEGVELYRLR---------------LDVENPDEILDKILEEVRKAYRR---GI 223 (304)
T ss_pred CCCCCcccc---------ccceeeeehcccceeeccc---------------CcccCHHHHHHHHHHHHHHHHHc---Cc
Confidence 67776654 2568999999986664332 12223334444444444444433 89
Q ss_pred EecCCCCCCeeecCCCceEEeecccceec
Q 039533 763 AHCDLKPSNVLLDDYMTARVGDFGLARIL 791 (949)
Q Consensus 763 vHrDlkp~NIll~~~~~~kl~DfG~a~~~ 791 (949)
||+|+++-||+++++|.+.++||-.+...
T Consensus 224 VHGDlSefNIlV~~dg~~~vIDwPQ~v~~ 252 (304)
T COG0478 224 VHGDLSEFNILVTEDGDIVVIDWPQAVPI 252 (304)
T ss_pred cccCCchheEEEecCCCEEEEeCcccccC
Confidence 99999999999999999999999766543
No 494
>KOG2137 consensus Protein kinase [Signal transduction mechanisms]
Probab=98.46 E-value=4.9e-08 Score=110.13 Aligned_cols=151 Identities=17% Similarity=0.245 Sum_probs=100.7
Q ss_pred HHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEeecccceecCCCCCccc-------cccccCccCccCccccC
Q 039533 744 AIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVGDFGLARILSPDHTQTS-------SFSVKGSLGYIAPEYGV 816 (949)
Q Consensus 744 ~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~-------~~~~~gt~~y~aPE~~~ 816 (949)
+.+++.|+.|+|... ++||++|.|++|.++..+..||+.|+++........... ..-......|.|||++.
T Consensus 105 l~~v~dgl~flh~sA--k~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~ 182 (700)
T KOG2137|consen 105 LGNVADGLAFLHRSA--KVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLL 182 (700)
T ss_pred hhcccchhhhhccCc--ceeecccchhheeeccCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhc
Confidence 334558999999764 999999999999999999999999998876544222110 01122567899999999
Q ss_pred CCccCCccchHHHHHHHHHHHh-CCCCCccccccCchhhhhccccCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhh
Q 039533 817 GCEVSTNGDVYSYGILLLELVI-GKKPIDIMFEGDINLHNFGRKALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINS 895 (949)
Q Consensus 817 ~~~~~~~sDiwSlGvvl~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~ 895 (949)
+...+.++|+||+||.+|.+.. |+.-++.. .....+ ...+. ..+. ..+..
T Consensus 183 ~~~~~~~sd~fSlG~li~~i~~~gk~i~~a~-~~~~~~-~~~~~--~~~~-------------------------~~~~~ 233 (700)
T KOG2137|consen 183 GTTNTPASDVFSLGVLIYTIYNGGKSIIAAN-GGLLSY-SFSRN--LLNA-------------------------GAFGY 233 (700)
T ss_pred cccccccccceeeeeEEEEEecCCcchhhcc-CCcchh-hhhhc--cccc-------------------------ccccc
Confidence 9888999999999999999994 55444321 111000 00000 0000 00001
Q ss_pred HHHHHHHHHHHhhccccCCCCCCCCHHHHH
Q 039533 896 IIECLISMVRIGVACSMELPQDRTNMTNVV 925 (949)
Q Consensus 896 ~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~ 925 (949)
..+.+.++.+-+.+.+..++.-||++.++.
T Consensus 234 s~~~p~el~~~l~k~l~~~~~~rp~~~~l~ 263 (700)
T KOG2137|consen 234 SNNLPSELRESLKKLLNGDSAVRPTLDLLL 263 (700)
T ss_pred cccCcHHHHHHHHHHhcCCcccCcchhhhh
Confidence 124566777778888888888999776663
No 495
>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane
Probab=98.42 E-value=1.9e-06 Score=87.85 Aligned_cols=111 Identities=21% Similarity=0.161 Sum_probs=83.8
Q ss_pred HHHHHHHHHHHhcCC--CcceeEEeeeecccccCCccceeEeeeccCC-ChhhhcCCCCCCCccccCCCCCCHHHHHHHH
Q 039533 668 RSFIAECKALKSIRH--RNLVKVLTACLGADYRGNDFKASVYEFMHYG-SLEEWLHPFTGEDEIDEAPRNLNLLQRLNIA 744 (949)
Q Consensus 668 ~~~~~E~~~l~~l~h--~niv~~~~~~~~~~~~~~~~~~lv~e~~~~g-sL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~ 744 (949)
.+..+|...+.++.. =.+++.+++..... ......++|+|++++. +|.+++.. ....+......++
T Consensus 56 ~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~-~~~~~s~lite~l~~~~~L~~~~~~----------~~~~~~~~~~~ll 124 (206)
T PF06293_consen 56 SRAKREWRNLQRLREAGIPTPEPVAYGERRK-GGGYRSYLITEALPGAQDLRDLLQQ----------WEQLDPSQRRELL 124 (206)
T ss_pred hHHHHHHHHHHHHHHcCCCCCcEEEEEEEcC-CCceeEEEEEEeCCCcccHHHHHHh----------hcccchhhHHHHH
Confidence 467888888888743 33555566544322 1123458999999874 79998862 1125566788899
Q ss_pred HHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCC---ceEEeecccceecC
Q 039533 745 IDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYM---TARVGDFGLARILS 792 (949)
Q Consensus 745 ~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~---~~kl~DfG~a~~~~ 792 (949)
.+++..++-||.. ||+|+|+++.|||++.+. .+.++||+-++...
T Consensus 125 ~~l~~~i~~lH~~---gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~~~ 172 (206)
T PF06293_consen 125 RALARLIAKLHDA---GIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRFRP 172 (206)
T ss_pred HHHHHHHHHHHHC---cCCCCCCCcccEEEeCCCCceeEEEEcchhceeCC
Confidence 9999999999988 999999999999999876 89999999887643
No 496
>PRK09902 hypothetical protein; Provisional
Probab=98.39 E-value=4.3e-06 Score=83.08 Aligned_cols=156 Identities=13% Similarity=0.055 Sum_probs=108.3
Q ss_pred HHHHhcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCC------CcchHHHHHHHHHHHhcCC--CcceeEEeee
Q 039533 621 LYNATSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQH------HGASRSFIAECKALKSIRH--RNLVKVLTAC 692 (949)
Q Consensus 621 l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~------~~~~~~~~~E~~~l~~l~h--~niv~~~~~~ 692 (949)
+-....++...---|+||.+.|++.... |..+-+|+-.... .-....|.+|+..+.++.. -.+++++ ++
T Consensus 13 ~w~~~~~wve~pN~~rgG~SgV~r~~~~--g~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pv-f~ 89 (216)
T PRK09902 13 WWATEGDWVEEPNYRRNGMSGVQCVERN--GKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIV-FG 89 (216)
T ss_pred HHhCCCceecCCCcCCCCcceEEEEEeC--CcEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccc-ee
Confidence 3333334443344577999999998876 4468888764111 2234689999999999852 2355555 33
Q ss_pred ecccccCCccceeEeeeccC-CChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCC
Q 039533 693 LGADYRGNDFKASVYEFMHY-GSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSN 771 (949)
Q Consensus 693 ~~~~~~~~~~~~lv~e~~~~-gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~N 771 (949)
...........++|+|-+++ .+|.+++... ...+.+...+..+..+++..++-||+. |+.|+|+.+.|
T Consensus 90 ~~~k~~~~~rA~LVTe~L~g~~~L~~~l~~~--------~~~~~~~~~k~~il~~va~~ia~LH~~---Gv~Hgdly~kh 158 (216)
T PRK09902 90 EAVKIEGEWRALLVTEDMAGFISIADWYAQH--------AVSPYSDEVRQAMLKAVALAFKKMHSV---NRQHGCCYVRH 158 (216)
T ss_pred eeeccCCceEEEEEEEeCCCCccHHHHHhcC--------CcCCcchHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHhh
Confidence 22211223346789997753 5888887521 123457778889999999999999977 99999999999
Q ss_pred eeecCCCc--eEEeeccccee
Q 039533 772 VLLDDYMT--ARVGDFGLARI 790 (949)
Q Consensus 772 Ill~~~~~--~kl~DfG~a~~ 790 (949)
|+++.++. ++++||.-++.
T Consensus 159 Ill~~~g~~~v~lIDlEk~r~ 179 (216)
T PRK09902 159 IYVKTEGKAEAGFLDLEKSRR 179 (216)
T ss_pred eeecCCCCeeEEEEEhhccch
Confidence 99986666 99999987764
No 497
>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]
Probab=98.38 E-value=5.8e-06 Score=83.05 Aligned_cols=155 Identities=19% Similarity=0.131 Sum_probs=104.6
Q ss_pred cCHHHHHHHhcCCCCCCeeee---ecCceEEEEEEcCCCEEEEEEEEecCCCcc-------------------h-----H
Q 039533 616 LSYQDLYNATSGFSSANLVGV---GSFGSVYKGIIDEGRTTIAVKVFNLQHHGA-------------------S-----R 668 (949)
Q Consensus 616 ~~~~~l~~~~~~y~~~~~lg~---G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~-------------------~-----~ 668 (949)
.+...+....++..+....|. |--+.||+|... ++..+|||+++.....- . .
T Consensus 35 ~t~~~l~~L~~rg~i~~~~g~istGKEA~Vy~a~~~-~~~~~avKiyr~~t~~fk~~~~Yi~gd~Rf~~~~~~rr~lv~~ 113 (268)
T COG1718 35 RTLETLRRLLSRGVITELVGCISTGKEANVYLAETG-DGRYVAVKIYRTSTSEFKRIRRYIQGDPRFRNSRSNRRKLVFA 113 (268)
T ss_pred HHHHHHHHHhcCCceeeeEeeecCCcceEEEeeccC-CCceEEEEEEehhhhhhhhHHHHHhcChhhhcCCCCHHHHHHH
Confidence 345566667777777766554 555689999875 68999999997432110 0 1
Q ss_pred HHHHHHHHHHhcC--CCcceeEEeeeecccccCCccceeEeeeccCCC-hhhhcCCCCCCCccccCCCCCCHHHHHHHHH
Q 039533 669 SFIAECKALKSIR--HRNLVKVLTACLGADYRGNDFKASVYEFMHYGS-LEEWLHPFTGEDEIDEAPRNLNLLQRLNIAI 745 (949)
Q Consensus 669 ~~~~E~~~l~~l~--h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~gs-L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~ 745 (949)
-..+|+..|.++. +=.+++-+++. .-.+||||+.... -.-.| ....+...++..+..
T Consensus 114 W~~kEf~NL~R~~eAGVrvP~Pi~~~---------~nVLvMEfIg~~g~pAP~L-----------kDv~~e~~e~~~~~~ 173 (268)
T COG1718 114 WARKEFRNLKRAYEAGVRVPEPIAFR---------NNVLVMEFIGDDGLPAPRL-----------KDVPLELEEAEGLYE 173 (268)
T ss_pred HHHHHHHHHHHHHHcCCCCCCceeec---------CCeEEEEeccCCCCCCCCc-----------ccCCcCchhHHHHHH
Confidence 1346788888874 44455555542 4589999995431 11111 112233336777888
Q ss_pred HHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEeecccceecCCC
Q 039533 746 DIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVGDFGLARILSPD 794 (949)
Q Consensus 746 qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~ 794 (949)
++++.+.-|-..+ ++||+||+.=|||+. ++.+.|+|||.|.....+
T Consensus 174 ~~v~~~~~l~~~a--~LVHgDLSEyNiL~~-~~~p~iID~~QaV~~~hp 219 (268)
T COG1718 174 DVVEYMRRLYKEA--GLVHGDLSEYNILVH-DGEPYIIDVSQAVTIDHP 219 (268)
T ss_pred HHHHHHHHHHHhc--CcccccchhhheEEE-CCeEEEEECccccccCCC
Confidence 8888888888633 999999999999999 789999999998766543
No 498
>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY). The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process
Probab=98.37 E-value=3.2e-06 Score=84.13 Aligned_cols=142 Identities=17% Similarity=0.132 Sum_probs=94.6
Q ss_pred hcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCCcchHH---------HHHHHHHHHhcC---CCcceeEEeee
Q 039533 625 TSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHGASRS---------FIAECKALKSIR---HRNLVKVLTAC 692 (949)
Q Consensus 625 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~---------~~~E~~~l~~l~---h~niv~~~~~~ 692 (949)
..+|.+.+++-......|.+.... +..+++|..+.......+. ..+++..+.+++ -.....++.+.
T Consensus 30 ~~~~~~~kv~k~~~r~~ValIei~--~~kyIlK~pr~~~~r~er~~~sf~kg~~~~~l~~~~~~i~~~g~~~~~~~yl~~ 107 (229)
T PF06176_consen 30 DNNYKIIKVFKNTKRNYVALIEID--GKKYILKEPREENRRPERRFKSFFKGSEYSRLINNTDKIRNEGFTEPADPYLAA 107 (229)
T ss_pred hCCceEEEeecCCCccEEEEEEEC--CcEEEEeccchhhhhHHHHHHHHhccHHHHHHHHHHHHHHHcCccccccceeee
Confidence 367888888888888888877764 7889999987544333222 233444444443 22333333332
Q ss_pred ecccccCCccceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCe
Q 039533 693 LGADYRGNDFKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNV 772 (949)
Q Consensus 693 ~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NI 772 (949)
.-..++-....+++|||++|..|.+... ++. .++..+++++.-+|.. |+.|+|..|+|+
T Consensus 108 ekk~~~~~~~~~ll~EYIeG~~l~d~~~--------------i~e----~~~~ki~~~ikqlH~~---G~~HGD~hpgNF 166 (229)
T PF06176_consen 108 EKKIFRYTSSYVLLMEYIEGVELNDIED--------------IDE----DLAEKIVEAIKQLHKH---GFYHGDPHPGNF 166 (229)
T ss_pred eeeeccceeEEEEEEEEecCeecccchh--------------cCH----HHHHHHHHHHHHHHHc---CCccCCCCcCcE
Confidence 2222222234568999999988876543 222 3556788889999977 999999999999
Q ss_pred eecCCCceEEeeccccee
Q 039533 773 LLDDYMTARVGDFGLARI 790 (949)
Q Consensus 773 ll~~~~~~kl~DfG~a~~ 790 (949)
+++++ .++++||+..+.
T Consensus 167 lv~~~-~i~iID~~~k~~ 183 (229)
T PF06176_consen 167 LVSNN-GIRIIDTQGKRM 183 (229)
T ss_pred EEECC-cEEEEECccccc
Confidence 99965 599999987653
No 499
>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only]
Probab=98.37 E-value=1.7e-08 Score=112.75 Aligned_cols=185 Identities=24% Similarity=0.248 Sum_probs=86.4
Q ss_pred CCCcCCCCCccEEeccccccCCCCCCcccCC-CccccccccCcccccccccc---cCCCCChhhhccccccccccCCCCC
Q 039533 178 PSSLGNLSSIHTISLAYNNLDGTIPNSFGWF-ENLVFLSLAANNLSVVENKL---TGEVPSLEKLQRLQHFTITSNSLGS 253 (949)
Q Consensus 178 p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l-~~L~~L~Ls~N~l~~~~~~l---~~~~~~l~~l~~L~~L~l~~N~l~~ 253 (949)
|-.+..+.+|++|.|.++.|+. .- .+..+ ..|++|-. .|.+..+..-+ .|.+.+-...-.|...+.++|++..
T Consensus 102 pi~ifpF~sLr~LElrg~~L~~-~~-GL~~lr~qLe~LIC-~~Sl~Al~~v~ascggd~~ns~~Wn~L~~a~fsyN~L~~ 178 (1096)
T KOG1859|consen 102 PISIFPFRSLRVLELRGCDLST-AK-GLQELRHQLEKLIC-HNSLDALRHVFASCGGDISNSPVWNKLATASFSYNRLVL 178 (1096)
T ss_pred CceeccccceeeEEecCcchhh-hh-hhHHHHHhhhhhhh-hccHHHHHHHHHHhccccccchhhhhHhhhhcchhhHHh
Confidence 4456677778888888777762 11 11111 23444432 23333222111 1222221222344555555555542
Q ss_pred CCCCCcchhccccccCcccEEEccCCCCCccCCchhhcccccccEEEccCccccCCCCCC-CCCCCcccEEEeecceecc
Q 039533 254 GGNDDLSFLCSLTNATRLTWMHINSNNFGGLLPGCISNLSKTIKTLFLNNNKIYGSIPAG-IGNFVNLQRLDMWNNQLSG 332 (949)
Q Consensus 254 ~~~~~~~~~~~l~~~~~L~~L~L~~N~l~~~~p~~~~~l~~~L~~L~L~~N~l~~~~~~~-~~~l~~L~~L~L~~N~l~~ 332 (949)
. -.++.-++.|+.|+|++|+++..- .+..++ .|++|||+.|.+. .+|.. ...+ .|+.|.|++|.++.
T Consensus 179 m-------D~SLqll~ale~LnLshNk~~~v~--~Lr~l~-~LkhLDlsyN~L~-~vp~l~~~gc-~L~~L~lrnN~l~t 246 (1096)
T KOG1859|consen 179 M-------DESLQLLPALESLNLSHNKFTKVD--NLRRLP-KLKHLDLSYNCLR-HVPQLSMVGC-KLQLLNLRNNALTT 246 (1096)
T ss_pred H-------HHHHHHHHHhhhhccchhhhhhhH--HHHhcc-cccccccccchhc-cccccchhhh-hheeeeecccHHHh
Confidence 1 123344445555555555555432 333443 3555666666555 23321 1122 35666666666552
Q ss_pred cCCCcccccCCCCEEecCCcccccccC-cccccccccceeeccccccc
Q 039533 333 TIPPAIGELQNLKILGLNRNKLSGNIP-PSIGNLKMLLNLFLNDNFLE 379 (949)
Q Consensus 333 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~ 379 (949)
. ..+.+|.+|+.|||++|-|.+.-. ..++.|..|+.|+|.+|.+.
T Consensus 247 L--~gie~LksL~~LDlsyNll~~hseL~pLwsLs~L~~L~LeGNPl~ 292 (1096)
T KOG1859|consen 247 L--RGIENLKSLYGLDLSYNLLSEHSELEPLWSLSSLIVLWLEGNPLC 292 (1096)
T ss_pred h--hhHHhhhhhhccchhHhhhhcchhhhHHHHHHHHHHHhhcCCccc
Confidence 1 234455566666666666554211 12445555666666666553
No 500
>KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only]
Probab=98.36 E-value=1.6e-08 Score=90.22 Aligned_cols=87 Identities=18% Similarity=0.177 Sum_probs=54.4
Q ss_pred cccceeeeccccccccCCcccccccchhhcccCccccccccCCCcCCCCCCCEEECCCCcCCCcCcccc-cCCccceEeC
Q 039533 439 KILEFLYVYENRLEGEIPSTFGNCIRLEQLGMGGNLFQGPISSSLGSLRGLRVLDLSQNNLSGEIPKFL-AGLSLNNLNL 517 (949)
Q Consensus 439 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~-~~~~L~~l~l 517 (949)
+.++.|+|++|+|+ .+|.++..++.|+.|+++.|.|. ..|..+..|.+|..||..+|.+. ++|..+ ..-..-..++
T Consensus 77 ~t~t~lNl~~neis-dvPeE~Aam~aLr~lNl~~N~l~-~~p~vi~~L~~l~~Lds~~na~~-eid~dl~~s~~~al~~l 153 (177)
T KOG4579|consen 77 PTATTLNLANNEIS-DVPEELAAMPALRSLNLRFNPLN-AEPRVIAPLIKLDMLDSPENARA-EIDVDLFYSSLPALIKL 153 (177)
T ss_pred chhhhhhcchhhhh-hchHHHhhhHHhhhcccccCccc-cchHHHHHHHhHHHhcCCCCccc-cCcHHHhccccHHHHHh
Confidence 35566666666666 66666777777777777777776 55666666777777777777776 444332 2212334455
Q ss_pred CCCcCcCcccc
Q 039533 518 SYNDLEGMVTT 528 (949)
Q Consensus 518 s~N~l~~~~~~ 528 (949)
.++++.+..+.
T Consensus 154 gnepl~~~~~~ 164 (177)
T KOG4579|consen 154 GNEPLGDETKK 164 (177)
T ss_pred cCCcccccCcc
Confidence 77777776554
Done!