Query 039533
Match_columns 949
No_of_seqs 1113 out of 7199
Neff 9.4
Searched_HMMs 29240
Date Mon Mar 25 18:20:54 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/039533.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/039533hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3rgz_A Protein brassinosteroid 100.0 4.8E-74 1.6E-78 706.7 33.6 535 16-561 5-751 (768)
2 4eco_A Uncharacterized protein 100.0 1.4E-59 4.8E-64 564.7 20.6 480 19-526 26-603 (636)
3 3rgz_A Protein brassinosteroid 100.0 2.4E-57 8.1E-62 558.2 25.3 449 65-525 200-743 (768)
4 4ecn_A Leucine-rich repeat pro 100.0 2.6E-57 9E-62 552.4 24.8 463 17-527 263-844 (876)
5 3t6q_A CD180 antigen; protein- 100.0 6.4E-55 2.2E-59 524.7 36.3 484 55-548 14-562 (606)
6 1ziw_A TOLL-like receptor 3; i 100.0 2.9E-53 9.8E-58 517.3 36.3 489 53-548 4-624 (680)
7 3vq2_A TLR4, TOLL-like recepto 100.0 4.3E-53 1.5E-57 508.8 36.1 483 51-550 5-562 (606)
8 3j0a_A TOLL-like receptor 5; m 100.0 3.4E-53 1.2E-57 526.6 34.0 483 53-548 14-562 (844)
9 3t6q_A CD180 antigen; protein- 100.0 1.8E-51 6E-56 494.7 31.7 448 65-528 57-565 (606)
10 3omv_A RAF proto-oncogene seri 100.0 1.1E-51 3.7E-56 443.2 18.4 263 626-936 36-303 (307)
11 3vq2_A TLR4, TOLL-like recepto 100.0 2E-50 6.8E-55 485.6 29.6 447 65-529 56-564 (606)
12 4aoj_A High affinity nerve gro 100.0 1.6E-51 5.4E-56 448.7 17.7 269 626-934 41-320 (329)
13 4asz_A BDNF/NT-3 growth factor 100.0 5.2E-52 1.8E-56 446.1 12.6 269 626-934 13-290 (299)
14 1ziw_A TOLL-like receptor 3; i 100.0 3.7E-49 1.3E-53 481.1 37.6 469 68-544 7-515 (680)
15 4gt4_A Tyrosine-protein kinase 100.0 6.2E-51 2.1E-55 439.7 14.9 265 627-931 27-304 (308)
16 2z63_A TOLL-like receptor 4, v 100.0 3.1E-49 1.1E-53 471.8 30.3 449 65-530 28-538 (570)
17 4fih_A Serine/threonine-protei 100.0 2.6E-50 9E-55 437.6 16.8 250 626-926 74-323 (346)
18 3j0a_A TOLL-like receptor 5; m 100.0 2E-48 6.9E-53 483.8 36.0 460 69-545 8-538 (844)
19 4b9d_A Serine/threonine-protei 100.0 2.2E-50 7.7E-55 438.8 12.6 252 625-926 23-276 (350)
20 4g3f_A NF-kappa-beta-inducing 100.0 1.2E-49 4.1E-54 431.2 18.1 258 626-936 58-319 (336)
21 3hmm_A TGF-beta receptor type- 100.0 2.5E-49 8.5E-54 428.7 19.4 281 626-934 3-298 (303)
22 2z81_A CD282 antigen, TOLL-lik 100.0 7E-49 2.4E-53 466.4 24.1 476 52-548 3-512 (549)
23 4aw0_A HPDK1, 3-phosphoinositi 100.0 6.5E-50 2.2E-54 427.9 13.0 249 626-925 32-283 (311)
24 3fpq_A Serine/threonine-protei 100.0 5.3E-49 1.8E-53 419.3 18.5 251 629-926 29-282 (290)
25 4fie_A Serine/threonine-protei 100.0 4.1E-49 1.4E-53 438.7 17.6 250 626-926 151-400 (423)
26 2z63_A TOLL-like receptor 4, v 100.0 1.6E-47 5.3E-52 457.1 31.5 454 70-549 12-534 (570)
27 3hyh_A Carbon catabolite-derep 100.0 9E-49 3.1E-53 413.6 15.8 247 625-926 12-262 (275)
28 4ecn_A Leucine-rich repeat pro 100.0 7.7E-48 2.6E-52 469.2 24.6 415 89-547 323-841 (876)
29 4ase_A Vascular endothelial gr 100.0 7.4E-49 2.5E-53 430.9 14.1 275 622-934 60-348 (353)
30 4eco_A Uncharacterized protein 100.0 1.5E-48 5.2E-53 468.8 14.7 434 89-550 81-604 (636)
31 2z7x_B TOLL-like receptor 1, v 100.0 1.9E-47 6.6E-52 450.6 19.5 442 69-527 4-485 (520)
32 3ubd_A Ribosomal protein S6 ki 100.0 3.6E-48 1.2E-52 414.7 9.6 243 626-921 24-271 (304)
33 4g31_A Eukaryotic translation 100.0 6.3E-47 2.2E-51 407.4 17.4 257 626-926 5-279 (299)
34 2z7x_B TOLL-like receptor 1, v 100.0 1.3E-46 4.5E-51 443.5 20.5 432 92-548 3-483 (520)
35 4g8a_A TOLL-like receptor 4; l 100.0 4.5E-45 1.6E-49 441.8 29.9 499 39-547 9-581 (635)
36 4b99_A Mitogen-activated prote 100.0 1.1E-45 3.8E-50 413.0 17.4 285 626-926 54-344 (398)
37 4g8a_A TOLL-like receptor 4; l 100.0 3.7E-43 1.3E-47 425.1 37.2 469 55-545 24-554 (635)
38 2z81_A CD282 antigen, TOLL-lik 100.0 9E-46 3.1E-50 439.6 13.8 446 65-529 50-516 (549)
39 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 1.2E-44 4E-49 430.4 22.4 442 68-528 34-515 (562)
40 1ogq_A PGIP-2, polygalacturona 100.0 7.7E-45 2.6E-49 397.6 17.9 198 19-219 2-207 (313)
41 4f9c_A Cell division cycle 7-r 100.0 3.7E-44 1.3E-48 396.6 17.4 199 624-845 19-249 (361)
42 3v47_A TOLL-like receptor 5B a 100.0 1.3E-42 4.5E-47 402.2 26.6 371 89-480 30-412 (455)
43 3v47_A TOLL-like receptor 5B a 100.0 1.3E-42 4.4E-47 402.3 25.1 367 113-529 30-414 (455)
44 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 1.7E-42 5.9E-47 411.7 26.6 430 90-548 32-512 (562)
45 3uto_A Twitchin; kinase, muscl 100.0 4.6E-43 1.6E-47 411.7 18.5 253 625-926 156-410 (573)
46 3v5w_A G-protein coupled recep 100.0 5.1E-43 1.7E-47 406.4 16.8 250 625-926 188-449 (689)
47 1jl5_A Outer protein YOPM; leu 100.0 4.5E-42 1.5E-46 394.4 23.7 384 65-524 11-410 (454)
48 2qkw_B Protein kinase; three-h 100.0 2.8E-42 9.6E-47 379.7 20.6 285 617-934 30-316 (321)
49 3uim_A Brassinosteroid insensi 100.0 5.4E-42 1.9E-46 378.4 20.9 289 612-931 16-309 (326)
50 1jl5_A Outer protein YOPM; leu 100.0 2.9E-41 9.9E-46 387.7 25.0 387 82-546 4-409 (454)
51 3s95_A LIMK-1, LIM domain kina 100.0 3.5E-42 1.2E-46 377.0 16.6 270 625-941 9-290 (310)
52 2nru_A Interleukin-1 receptor- 100.0 2.1E-40 7.1E-45 362.4 27.7 285 612-934 11-307 (307)
53 3fxz_A Serine/threonine-protei 100.0 2.6E-41 8.8E-46 367.2 20.1 251 625-926 19-269 (297)
54 3soc_A Activin receptor type-2 100.0 3E-41 1E-45 371.4 18.3 282 625-934 23-319 (322)
55 2c30_A Serine/threonine-protei 100.0 2E-40 6.9E-45 364.3 21.2 263 613-926 22-294 (321)
56 2psq_A Fibroblast growth facto 100.0 1.1E-40 3.7E-45 373.6 19.0 272 625-936 80-367 (370)
57 3ugc_A Tyrosine-protein kinase 100.0 1.6E-41 5.6E-46 368.9 11.8 276 625-936 9-294 (295)
58 3p86_A Serine/threonine-protei 100.0 1.2E-40 4E-45 363.9 18.5 264 623-936 34-301 (309)
59 3lb7_A RAF proto-oncogene seri 100.0 1.3E-40 4.5E-45 363.3 18.5 265 625-937 35-304 (307)
60 3q4u_A Activin receptor type-1 100.0 2.5E-40 8.5E-45 360.8 19.8 266 625-931 7-300 (301)
61 3tki_A Serine/threonine-protei 100.0 1.4E-40 4.7E-45 365.8 17.4 255 625-927 6-262 (323)
62 3cbl_A C-FES, proto-oncogene t 100.0 2.4E-41 8.2E-46 380.3 11.3 262 625-935 113-376 (377)
63 3kul_A Ephrin type-A receptor 100.0 9.6E-41 3.3E-45 367.5 15.7 262 626-936 49-316 (325)
64 3fe3_A MAP/microtubule affinit 100.0 1.3E-40 4.3E-45 366.1 15.9 250 624-927 13-265 (328)
65 2yab_A Death-associated protei 100.0 6E-40 2E-44 365.0 21.0 252 625-926 11-272 (361)
66 3zgw_A Maternal embryonic leuc 100.0 1.1E-40 3.7E-45 368.5 14.8 252 624-927 8-261 (347)
67 1tki_A Titin; serine kinase, m 100.0 5.9E-40 2E-44 360.2 19.8 252 625-926 4-257 (321)
68 4eqm_A Protein kinase; transfe 100.0 2.7E-40 9.2E-45 358.8 15.9 263 625-934 10-276 (294)
69 3op5_A Serine/threonine-protei 100.0 3.1E-40 1.1E-44 369.9 16.0 284 624-943 33-339 (364)
70 3vhe_A Vascular endothelial gr 100.0 2.1E-40 7.1E-45 371.1 14.4 282 616-935 12-357 (359)
71 3l9p_A Anaplastic lymphoma kin 100.0 9.7E-41 3.3E-45 373.7 11.5 270 625-937 70-349 (367)
72 2y0a_A Death-associated protei 100.0 1.3E-39 4.3E-44 358.8 20.1 251 626-926 11-271 (326)
73 1o6l_A RAC-beta serine/threoni 100.0 6.7E-40 2.3E-44 361.2 17.9 249 625-926 4-260 (337)
74 1csn_A Casein kinase-1; phosph 100.0 1.6E-39 5.5E-44 353.8 20.6 274 625-943 9-293 (298)
75 4hcu_A Tyrosine-protein kinase 100.0 3.6E-40 1.2E-44 353.2 15.1 258 625-934 9-267 (269)
76 3sxs_A Cytoplasmic tyrosine-pr 100.0 6.4E-40 2.2E-44 351.0 16.8 258 625-934 7-265 (268)
77 2qol_A Ephrin receptor; recept 100.0 4.1E-40 1.4E-44 369.1 15.7 262 625-935 44-311 (373)
78 2izr_A Casein kinase I isoform 100.0 1.6E-39 5.3E-44 359.2 19.8 266 625-937 8-285 (330)
79 3h4j_B AMPK kdaid, SNF1-like p 100.0 9.4E-40 3.2E-44 359.7 17.4 248 625-927 8-259 (336)
80 3bz5_A Internalin-J, INLJ; leu 100.0 2.3E-39 7.9E-44 372.2 21.2 358 82-528 35-392 (457)
81 3lxl_A Tyrosine-protein kinase 100.0 2.9E-40 9.8E-45 364.7 13.1 283 626-943 23-313 (327)
82 3poz_A Epidermal growth factor 100.0 4.2E-40 1.4E-44 363.1 14.3 259 626-934 15-279 (327)
83 2zv2_A Calcium/calmodulin-depe 100.0 1.7E-39 5.8E-44 353.5 17.9 252 625-926 12-292 (298)
84 4f0f_A Serine/threonine-protei 100.0 1.9E-39 6.4E-44 351.2 18.0 254 625-931 18-287 (287)
85 1luf_A Muscle-specific tyrosin 100.0 4.2E-40 1.4E-44 366.1 13.2 275 623-937 44-339 (343)
86 2ivs_A Proto-oncogene tyrosine 100.0 1.2E-39 4.1E-44 357.7 16.6 270 625-934 22-312 (314)
87 3c0i_A Peripheral plasma membr 100.0 2E-39 6.9E-44 360.9 18.6 255 626-926 24-286 (351)
88 3soa_A Calcium/calmodulin-depe 100.0 1.9E-39 6.5E-44 370.4 18.5 253 625-926 10-267 (444)
89 3o0g_A Cell division protein k 100.0 1.6E-39 5.5E-44 352.6 17.1 274 626-926 2-282 (292)
90 1kob_A Twitchin; kinase, intra 100.0 2.1E-39 7.2E-44 363.9 18.5 253 625-926 50-304 (387)
91 1o6v_A Internalin A; bacterial 100.0 1.3E-38 4.4E-43 369.1 25.7 346 87-501 44-389 (466)
92 3qup_A Tyrosine-protein kinase 100.0 7.6E-40 2.6E-44 360.8 14.5 274 624-936 21-301 (323)
93 2bdw_A Hypothetical protein K1 100.0 2.3E-39 8E-44 361.4 18.5 253 625-927 28-285 (362)
94 4dc2_A Protein kinase C IOTA t 100.0 1.6E-39 5.5E-44 364.6 17.1 252 625-921 51-307 (396)
95 3og7_A AKAP9-BRAF fusion prote 100.0 1.3E-39 4.6E-44 352.6 15.9 261 625-933 23-288 (289)
96 4euu_A Serine/threonine-protei 100.0 5.3E-39 1.8E-43 353.2 20.6 284 626-931 9-307 (319)
97 3g2f_A Bone morphogenetic prot 100.0 8.5E-40 2.9E-44 362.6 14.2 290 625-942 12-327 (336)
98 3txo_A PKC-L, NPKC-ETA, protei 100.0 6.7E-40 2.3E-44 363.7 13.2 250 624-926 21-280 (353)
99 4fr4_A YANK1, serine/threonine 100.0 2.9E-39 9.9E-44 361.3 18.1 251 625-926 14-271 (384)
100 3tt0_A Basic fibroblast growth 100.0 2.7E-39 9.1E-44 364.5 17.8 275 625-939 68-358 (382)
101 2pmi_A Negative RE, cyclin-dep 100.0 2.7E-39 9.2E-44 354.9 17.2 282 624-926 3-293 (317)
102 3v8s_A RHO-associated protein 100.0 7.7E-40 2.6E-44 369.3 13.1 261 618-927 61-330 (410)
103 1k9a_A Carboxyl-terminal SRC k 100.0 5.1E-39 1.7E-43 369.7 19.9 254 625-934 192-446 (450)
104 3brb_A Proto-oncogene tyrosine 100.0 2.7E-39 9.1E-44 354.7 16.8 276 623-937 31-312 (313)
105 2id5_A Lingo-1, leucine rich r 100.0 2.3E-38 7.7E-43 368.8 25.5 241 310-551 120-361 (477)
106 2eva_A TAK1 kinase - TAB1 chim 100.0 5.2E-39 1.8E-43 351.0 18.8 260 626-938 8-268 (307)
107 1o6v_A Internalin A; bacterial 100.0 2.3E-38 7.7E-43 367.1 25.2 349 110-527 43-392 (466)
108 1rjb_A FL cytokine receptor; k 100.0 2.1E-39 7.3E-44 360.6 16.0 275 624-937 43-338 (344)
109 3kex_A Receptor tyrosine-prote 100.0 9.4E-40 3.2E-44 360.0 12.7 259 626-934 13-277 (325)
110 3dtc_A Mitogen-activated prote 100.0 2.6E-39 9E-44 346.9 15.7 254 625-931 6-271 (271)
111 1fot_A TPK1 delta, CAMP-depend 100.0 3.7E-39 1.3E-43 352.8 17.1 246 625-926 5-258 (318)
112 1t46_A HOMO sapiens V-KIT hard 100.0 2E-39 6.9E-44 355.7 15.1 272 625-935 22-309 (313)
113 1xjd_A Protein kinase C, theta 100.0 1.6E-39 5.5E-44 359.2 14.2 251 622-925 13-268 (345)
114 3gen_A Tyrosine-protein kinase 100.0 2.3E-39 8E-44 349.7 15.2 258 625-934 23-281 (283)
115 4e5w_A Tyrosine-protein kinase 100.0 1.6E-39 5.4E-44 354.6 14.0 271 626-932 21-301 (302)
116 3niz_A Rhodanese family protei 100.0 4.6E-39 1.6E-43 351.9 17.6 270 625-926 20-300 (311)
117 1mp8_A Focal adhesion kinase 1 100.0 2.3E-39 7.9E-44 349.2 14.9 260 625-935 14-278 (281)
118 2w4o_A Calcium/calmodulin-depe 100.0 3.9E-39 1.3E-43 358.1 17.2 252 624-926 51-305 (349)
119 3ork_A Serine/threonine protei 100.0 2.2E-39 7.4E-44 354.9 14.6 266 625-933 11-281 (311)
120 4hgt_A Casein kinase I isoform 100.0 1.1E-38 3.9E-43 346.7 20.2 277 624-944 7-291 (296)
121 3f3z_A Calcium/calmodulin-depe 100.0 7.4E-39 2.5E-43 344.6 18.5 251 625-926 8-261 (277)
122 3ttj_A Mitogen-activated prote 100.0 1E-38 3.6E-43 367.5 20.8 279 625-926 61-355 (464)
123 3qd2_B Eukaryotic translation 100.0 9.7E-39 3.3E-43 353.4 19.8 258 625-926 5-325 (332)
124 2yex_A Serine/threonine-protei 100.0 9.3E-39 3.2E-43 343.6 19.1 254 625-926 6-261 (276)
125 4aw2_A Serine/threonine-protei 100.0 2.1E-39 7.3E-44 368.5 14.8 264 617-926 65-338 (437)
126 3a8x_A Protein kinase C IOTA t 100.0 4.8E-39 1.7E-43 356.1 17.1 252 625-921 8-264 (345)
127 3uzp_A CKI-delta, CKID, casein 100.0 1.5E-38 5E-43 345.8 20.6 275 625-943 8-290 (296)
128 3lxp_A Non-receptor tyrosine-p 100.0 1.5E-39 5.1E-44 357.3 12.8 278 628-940 33-317 (318)
129 2pvf_A Fibroblast growth facto 100.0 5.2E-39 1.8E-43 355.6 16.7 274 625-938 34-323 (334)
130 3n9x_A Phosphotransferase; mal 100.0 6.4E-39 2.2E-43 367.1 18.0 206 625-844 25-253 (432)
131 3bz5_A Internalin-J, INLJ; leu 100.0 9.1E-39 3.1E-43 367.2 19.2 359 97-544 26-385 (457)
132 2x4f_A Myosin light chain kina 100.0 8E-39 2.7E-43 358.4 18.2 247 631-926 94-342 (373)
133 3lzb_A Epidermal growth factor 100.0 2.9E-39 1E-43 356.0 14.3 260 625-934 14-279 (327)
134 2a2a_A Death-associated protei 100.0 1.4E-38 4.8E-43 350.1 19.7 252 625-926 11-272 (321)
135 3rp9_A Mitogen-activated prote 100.0 4.2E-39 1.4E-43 372.4 16.0 202 625-840 52-281 (458)
136 1opk_A P150, C-ABL, proto-onco 100.0 4.1E-39 1.4E-43 374.7 15.9 258 625-932 219-477 (495)
137 4fvq_A Tyrosine-protein kinase 100.0 1.3E-39 4.4E-44 352.9 10.9 254 625-934 7-276 (289)
138 3g33_A Cell division protein k 100.0 7.5E-39 2.6E-43 350.2 17.0 277 624-926 7-296 (308)
139 3c1x_A Hepatocyte growth facto 100.0 4.9E-39 1.7E-43 359.8 15.3 264 627-938 90-360 (373)
140 3mdy_A Bone morphogenetic prot 100.0 3.8E-38 1.3E-42 349.4 22.4 285 622-936 33-334 (337)
141 2v62_A Serine/threonine-protei 100.0 2.6E-39 8.8E-44 359.6 12.9 269 625-933 36-328 (345)
142 1qcf_A Haematopoetic cell kina 100.0 2.4E-39 8.3E-44 373.1 12.9 260 625-936 187-447 (454)
143 3t9t_A Tyrosine-protein kinase 100.0 5.3E-39 1.8E-43 343.7 14.5 258 625-934 7-265 (267)
144 2buj_A Serine/threonine-protei 100.0 4.6E-39 1.6E-43 353.5 14.3 270 625-934 28-307 (317)
145 1rdq_E PKA C-alpha, CAMP-depen 100.0 7.8E-39 2.7E-43 355.0 16.2 246 625-926 40-293 (350)
146 2i0e_A Protein kinase C-beta I 100.0 7.2E-39 2.5E-43 355.1 15.9 250 624-926 18-276 (353)
147 3kn6_A Ribosomal protein S6 ki 100.0 1.3E-38 4.5E-43 350.4 17.8 251 631-926 16-270 (325)
148 3kmu_A ILK, integrin-linked ki 100.0 7.8E-39 2.7E-43 343.2 15.6 257 625-933 9-270 (271)
149 2w1i_A JAK2; chromosomal rearr 100.0 4.2E-39 1.4E-43 355.1 13.8 275 626-936 41-325 (326)
150 2y94_A 5'-AMP-activated protei 100.0 1.6E-38 5.4E-43 365.0 19.0 248 625-926 15-266 (476)
151 1ob3_A PFPK5, cell division co 100.0 8.5E-39 2.9E-43 346.1 15.8 268 626-926 2-280 (288)
152 3gni_B Strad alpha; kinase fol 100.0 1.3E-38 4.3E-43 360.4 17.8 283 624-927 23-334 (389)
153 2wqm_A Serine/threonine-protei 100.0 1.2E-38 4E-43 349.1 16.9 270 625-939 31-303 (310)
154 3f66_A Hepatocyte growth facto 100.0 1.3E-38 4.5E-43 346.6 17.2 264 626-937 25-295 (298)
155 2eue_A Carbon catabolite derep 100.0 1E-38 3.5E-43 343.0 16.1 247 625-926 12-262 (275)
156 3kk8_A Calcium/calmodulin depe 100.0 1.7E-38 5.7E-43 343.2 17.8 252 625-926 5-261 (284)
157 2vd5_A DMPK protein; serine/th 100.0 6.2E-39 2.1E-43 362.2 14.9 262 617-926 52-327 (412)
158 1qpc_A LCK kinase; alpha beta 100.0 2.1E-38 7E-43 341.5 18.2 262 625-938 12-274 (279)
159 3uc3_A Serine/threonine-protei 100.0 5.5E-39 1.9E-43 358.5 14.2 254 625-927 19-275 (361)
160 3dls_A PAS domain-containing s 100.0 1.1E-38 3.6E-43 352.5 16.3 243 625-927 23-275 (335)
161 2xir_A Vascular endothelial gr 100.0 5.9E-39 2E-43 352.5 14.1 283 616-936 17-313 (316)
162 3kfa_A Tyrosine-protein kinase 100.0 7.7E-39 2.6E-43 346.6 14.8 262 624-935 11-273 (288)
163 4agu_A Cyclin-dependent kinase 100.0 6.7E-39 2.3E-43 351.2 14.4 272 626-926 3-284 (311)
164 1p4o_A Insulin-like growth fac 100.0 6.7E-40 2.3E-44 361.0 6.3 275 620-934 19-300 (322)
165 3o6n_A APL1; leucine-rich repe 100.0 1.2E-37 3.9E-42 352.7 24.7 351 42-477 2-353 (390)
166 3pls_A Macrophage-stimulating 100.0 2.5E-38 8.6E-43 344.4 18.3 266 627-939 22-293 (298)
167 4eut_A Serine/threonine-protei 100.0 1.3E-38 4.5E-43 360.5 16.8 288 626-935 9-311 (396)
168 3cok_A Serine/threonine-protei 100.0 2.1E-38 7.1E-43 341.3 17.5 250 625-926 10-262 (278)
169 3hko_A Calcium/calmodulin-depe 100.0 1.5E-38 5.3E-43 353.8 16.9 270 620-926 20-330 (345)
170 2h34_A Serine/threonine-protei 100.0 1.4E-38 4.9E-43 347.9 16.3 264 624-936 32-299 (309)
171 2i1m_A Macrophage colony-stimu 100.0 5.4E-39 1.8E-43 355.6 13.1 275 623-936 43-329 (333)
172 3llt_A Serine/threonine kinase 100.0 9.5E-39 3.3E-43 357.6 15.1 212 612-846 21-262 (360)
173 3cc6_A Protein tyrosine kinase 100.0 7.8E-39 2.7E-43 345.1 13.9 261 624-935 10-275 (281)
174 3bhy_A Death-associated protei 100.0 3.8E-38 1.3E-42 340.2 19.3 259 626-934 5-275 (283)
175 3i6u_A CDS1, serine/threonine- 100.0 3.2E-38 1.1E-42 359.6 19.6 254 623-926 132-399 (419)
176 1b6c_B TGF-B superfamily recep 100.0 7E-38 2.4E-42 348.1 22.0 277 618-935 34-338 (342)
177 1mqb_A Ephrin type-A receptor 100.0 1.5E-38 5.2E-43 351.4 16.4 263 626-937 44-313 (333)
178 3oz6_A Mitogen-activated prote 100.0 8.1E-39 2.8E-43 361.7 14.4 206 623-846 6-234 (388)
179 2ac3_A MAP kinase-interacting 100.0 1.4E-38 4.6E-43 349.6 15.5 265 626-926 12-295 (316)
180 1u59_A Tyrosine-protein kinase 100.0 3E-38 1E-42 341.7 18.0 264 626-939 9-278 (287)
181 3gxj_A TGF-beta receptor type- 100.0 5E-40 1.7E-44 358.7 3.9 277 625-934 2-298 (303)
182 3p1a_A MYT1 kinase, membrane-a 100.0 2.3E-38 7.8E-43 346.5 17.1 245 626-926 57-304 (311)
183 3fdn_A Serine/threonine-protei 100.0 1.2E-38 4.1E-43 343.3 14.6 249 624-927 7-258 (279)
184 3oja_B Anopheles plasmodium-re 100.0 1E-37 3.5E-42 372.7 24.1 352 39-478 5-360 (597)
185 3a62_A Ribosomal protein S6 ki 100.0 1.6E-38 5.6E-43 350.1 15.9 249 625-926 16-276 (327)
186 2r5t_A Serine/threonine-protei 100.0 5.4E-39 1.8E-43 358.7 12.0 251 625-928 37-291 (373)
187 1xbb_A Tyrosine-protein kinase 100.0 7.8E-39 2.7E-43 347.0 12.9 264 624-938 14-284 (291)
188 3qyz_A Mitogen-activated prote 100.0 1.8E-38 6.3E-43 355.5 16.3 285 625-926 26-313 (364)
189 3ll6_A Cyclin G-associated kin 100.0 1.6E-38 5.4E-43 352.4 15.6 275 625-943 27-318 (337)
190 1cm8_A Phosphorylated MAP kina 100.0 1.4E-38 4.6E-43 356.1 14.9 279 625-926 24-307 (367)
191 2jii_A Serine/threonine-protei 100.0 5.1E-39 1.7E-43 358.4 11.2 276 625-943 41-346 (352)
192 3e7e_A HBUB1, BUB1A, mitotic c 100.0 2.9E-38 1E-42 354.1 17.3 258 624-934 63-340 (365)
193 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 1.3E-38 4.3E-43 366.6 14.5 260 625-936 183-443 (452)
194 3dbq_A Dual specificity protei 100.0 1.4E-38 4.8E-43 353.4 14.3 252 625-927 8-274 (343)
195 1byg_A CSK, protein (C-termina 100.0 1.7E-38 5.6E-43 342.0 14.3 254 625-934 20-274 (278)
196 2yfx_A Tyrosine-protein kinase 100.0 1.1E-38 3.8E-43 351.9 13.1 268 625-935 29-306 (327)
197 1t4h_A Serine/threonine-protei 100.0 4.6E-38 1.6E-42 340.8 17.7 253 627-926 27-282 (290)
198 2a19_B Interferon-induced, dou 100.0 1.5E-38 5E-43 343.6 13.6 259 625-938 10-279 (284)
199 4ejn_A RAC-alpha serine/threon 100.0 8.5E-39 2.9E-43 368.1 12.3 249 625-926 147-404 (446)
200 2qr7_A Ribosomal protein S6 ki 100.0 1.8E-38 6.3E-43 351.0 14.6 252 625-926 21-277 (342)
201 2ozo_A Tyrosine-protein kinase 100.0 4.1E-38 1.4E-42 374.7 18.5 261 633-943 343-608 (613)
202 1nxk_A MAP kinase-activated pr 100.0 5.8E-38 2E-42 354.9 18.6 257 625-927 60-322 (400)
203 3is5_A Calcium-dependent prote 100.0 2.3E-38 8E-43 342.0 14.7 253 626-926 22-278 (285)
204 2acx_A G protein-coupled recep 100.0 3.3E-38 1.1E-42 366.7 16.7 254 625-926 183-444 (576)
205 2fst_X Mitogen-activated prote 100.0 1.5E-38 5.1E-43 355.4 13.1 279 625-926 28-311 (367)
206 1fvr_A Tyrosine-protein kinase 100.0 2.8E-38 9.6E-43 348.7 15.1 271 625-938 24-305 (327)
207 3nsz_A CK II alpha, casein kin 100.0 4.7E-38 1.6E-42 347.5 16.8 267 625-926 35-319 (330)
208 3gbz_A Kinase, CMGC CDK; ssgci 100.0 2.1E-38 7.3E-43 349.7 13.9 277 623-926 31-318 (329)
209 2rku_A Serine/threonine-protei 100.0 4.6E-38 1.6E-42 341.5 16.2 250 625-927 14-266 (294)
210 2jam_A Calcium/calmodulin-depe 100.0 4.1E-38 1.4E-42 343.6 15.6 251 625-926 8-261 (304)
211 2y7j_A Phosphorylase B kinase 100.0 9.5E-38 3.2E-42 349.2 18.9 257 620-926 88-359 (365)
212 3mtl_A Cell division protein k 100.0 7.9E-39 2.7E-43 352.4 9.7 283 626-933 2-290 (324)
213 2zmd_A Dual specificity protei 100.0 3.8E-38 1.3E-42 355.3 15.5 251 626-927 56-321 (390)
214 2id5_A Lingo-1, leucine rich r 100.0 5.2E-37 1.8E-41 357.3 25.5 317 72-453 18-334 (477)
215 1u5q_A Serine/threonine protei 100.0 3.4E-38 1.2E-42 350.0 14.6 247 626-927 54-306 (348)
216 2xrw_A Mitogen-activated prote 100.0 1.7E-37 5.6E-42 348.4 20.3 280 625-926 24-318 (371)
217 2clq_A Mitogen-activated prote 100.0 1.3E-37 4.6E-42 338.1 18.9 253 627-926 23-278 (295)
218 3sv0_A Casein kinase I-like; t 100.0 1.8E-37 6.1E-42 356.9 20.8 268 625-937 6-282 (483)
219 2owb_A Serine/threonine-protei 100.0 4.9E-38 1.7E-42 347.7 15.5 250 625-927 40-292 (335)
220 2vgo_A Serine/threonine-protei 100.0 8.2E-38 2.8E-42 337.7 16.8 247 625-926 13-262 (284)
221 3c4z_A Rhodopsin kinase; Ser/T 100.0 9.1E-38 3.1E-42 362.5 17.9 252 625-921 184-438 (543)
222 3a7i_A MST3 kinase, serine/thr 100.0 1.1E-37 3.8E-42 340.1 17.5 250 625-927 21-271 (303)
223 3lm5_A Serine/threonine-protei 100.0 7.7E-38 2.6E-42 344.9 15.8 257 622-926 24-287 (327)
224 3mwu_A Calmodulin-domain prote 100.0 9.9E-38 3.4E-42 363.3 17.6 252 625-927 21-277 (486)
225 2w5a_A Serine/threonine-protei 100.0 2.7E-38 9.3E-43 340.5 11.7 258 625-928 5-269 (279)
226 3byv_A Rhoptry kinase; malaria 100.0 5.8E-39 2E-43 361.3 6.6 260 625-934 72-369 (377)
227 3nyv_A Calmodulin-domain prote 100.0 5.5E-38 1.9E-42 365.6 15.0 250 626-926 26-281 (484)
228 3q5i_A Protein kinase; CDPK, m 100.0 1.8E-37 6E-42 362.8 19.3 251 625-926 35-301 (504)
229 4aaa_A Cyclin-dependent kinase 100.0 2E-38 6.8E-43 350.5 10.4 272 625-926 24-306 (331)
230 1x8b_A WEE1HU, WEE1-like prote 100.0 1.1E-37 3.7E-42 337.6 15.7 247 625-926 10-279 (289)
231 2h6d_A 5'-AMP-activated protei 100.0 9.9E-38 3.4E-42 335.6 15.3 249 625-927 10-262 (276)
232 3lij_A Calcium/calmodulin depe 100.0 1.2E-37 4.1E-42 363.2 17.1 251 625-926 36-291 (494)
233 1ua2_A CAK, cell division prot 100.0 1.2E-37 4.2E-42 346.2 16.4 275 622-927 6-292 (346)
234 3pg1_A Mitogen-activated prote 100.0 6E-38 2E-42 351.4 13.9 281 617-926 13-316 (362)
235 4fl3_A Tyrosine-protein kinase 100.0 7.6E-38 2.6E-42 373.2 15.5 253 632-935 375-633 (635)
236 3eqc_A Dual specificity mitoge 100.0 5.3E-38 1.8E-42 351.5 12.9 201 625-846 32-233 (360)
237 3mi9_A Cell division protein k 100.0 2.6E-37 8.8E-42 344.6 18.0 280 625-926 16-311 (351)
238 4exu_A Mitogen-activated prote 100.0 1.6E-37 5.6E-42 348.4 16.4 280 625-927 41-324 (371)
239 3com_A Serine/threonine-protei 100.0 2.2E-37 7.5E-42 339.6 16.9 252 624-926 27-278 (314)
240 2b9h_A MAP kinase FUS3, mitoge 100.0 1.3E-37 4.4E-42 347.5 15.3 284 625-926 10-305 (353)
241 3fme_A Dual specificity mitoge 100.0 8.8E-38 3E-42 338.6 13.6 255 625-926 6-266 (290)
242 3eb0_A Putative uncharacterize 100.0 1E-37 3.5E-42 351.8 14.6 288 622-933 3-330 (383)
243 2wtk_C Serine/threonine-protei 100.0 4.3E-37 1.5E-41 335.8 19.1 255 625-927 4-264 (305)
244 2ycf_A Serine/threonine-protei 100.0 3.2E-37 1.1E-41 339.4 18.1 252 625-926 9-274 (322)
245 2j7t_A Serine/threonine-protei 100.0 5.7E-38 2E-42 342.2 12.0 254 624-926 17-275 (302)
246 1phk_A Phosphorylase kinase; g 100.0 2.9E-37 1E-41 335.9 17.3 253 624-926 15-283 (298)
247 2h8h_A Proto-oncogene tyrosine 100.0 4.6E-38 1.6E-42 369.1 11.5 259 625-935 266-525 (535)
248 1u46_A ACK-1, activated CDC42 100.0 7E-38 2.4E-42 339.6 12.0 261 625-934 17-285 (291)
249 2x7f_A TRAF2 and NCK-interacti 100.0 8.7E-38 3E-42 344.8 12.4 266 616-926 14-286 (326)
250 3an0_A Dual specificity mitoge 100.0 1.3E-37 4.4E-42 345.5 13.8 256 624-926 49-310 (340)
251 3q60_A ROP5B; pseudokinase, tr 100.0 1.6E-37 5.3E-42 348.9 14.5 259 626-926 62-352 (371)
252 3pfq_A PKC-B, PKC-beta, protei 100.0 3.2E-37 1.1E-41 370.4 17.4 245 624-921 339-587 (674)
253 2r3i_A Cell division protein k 100.0 1.8E-37 6.1E-42 337.8 13.7 270 626-926 3-283 (299)
254 2vwi_A Serine/threonine-protei 100.0 1.1E-37 3.7E-42 340.2 11.9 269 624-926 13-287 (303)
255 2i6l_A Mitogen-activated prote 100.0 3.3E-37 1.1E-41 339.2 15.7 280 625-926 10-305 (320)
256 3e3p_A Protein kinase, putativ 100.0 5.4E-37 1.9E-41 343.5 16.9 291 619-926 16-314 (360)
257 1vzo_A Ribosomal protein S6 ki 100.0 2E-37 6.7E-42 345.4 13.1 256 625-928 53-323 (355)
258 2pml_X PFPK7, Ser/Thr protein 100.0 4.6E-37 1.6E-41 342.3 15.9 271 625-926 30-322 (348)
259 1wak_A Serine/threonine-protei 100.0 1E-36 3.5E-41 346.2 18.9 283 626-926 37-391 (397)
260 3kvw_A DYRK2, dual specificity 100.0 1.4E-36 4.7E-41 346.9 19.6 199 625-846 96-302 (429)
261 3coi_A Mitogen-activated prote 100.0 6.4E-37 2.2E-41 341.7 16.0 279 625-926 23-305 (353)
262 1j1b_A Glycogen synthase kinas 100.0 1E-36 3.5E-41 347.2 17.4 275 626-926 54-336 (420)
263 2wei_A Calmodulin-domain prote 100.0 7.7E-37 2.6E-41 330.6 15.4 252 624-926 20-276 (287)
264 1blx_A Cyclin-dependent kinase 100.0 4.7E-36 1.6E-40 330.9 20.4 276 623-926 8-296 (326)
265 4e7w_A Glycogen synthase kinas 100.0 2.1E-36 7.2E-41 341.8 17.0 269 626-926 40-321 (394)
266 2y4i_B KSR2, HKSR2, kinase sup 100.0 3.2E-37 1.1E-41 339.1 10.1 263 624-938 31-307 (319)
267 1z57_A Dual specificity protei 100.0 2.7E-36 9.2E-41 334.7 17.4 279 625-926 13-328 (339)
268 3aln_A Dual specificity mitoge 100.0 1.5E-36 5.2E-41 334.9 15.1 259 625-926 21-285 (327)
269 2j0j_A Focal adhesion kinase 1 100.0 1.2E-36 4E-41 364.4 15.2 259 625-934 389-652 (656)
270 3fhr_A MAP kinase-activated pr 100.0 2.2E-36 7.7E-41 334.3 16.0 257 625-926 27-287 (336)
271 2vx3_A Dual specificity tyrosi 100.0 2.8E-36 9.6E-41 340.0 17.0 203 623-846 51-261 (382)
272 3cek_A Dual specificity protei 100.0 1.6E-36 5.4E-41 332.5 14.5 253 624-927 26-293 (313)
273 1zy4_A Serine/threonine-protei 100.0 2.4E-36 8.3E-41 329.4 14.9 258 625-926 5-283 (303)
274 1q8y_A SR protein kinase; tran 100.0 3.6E-36 1.2E-40 338.5 16.8 284 625-926 18-333 (373)
275 3a99_A Proto-oncogene serine/t 100.0 1E-36 3.4E-41 334.9 11.6 243 623-926 40-293 (320)
276 2iwi_A Serine/threonine-protei 100.0 1.8E-36 6.3E-41 331.9 12.7 244 622-926 27-283 (312)
277 3rgf_A Cyclin-dependent kinase 100.0 4.1E-36 1.4E-40 341.4 15.9 210 627-846 21-239 (405)
278 3oja_B Anopheles plasmodium-re 100.0 1.6E-35 5.4E-40 353.7 21.0 239 296-553 149-387 (597)
279 3o6n_A APL1; leucine-rich repe 100.0 3.5E-35 1.2E-39 332.4 21.7 232 299-550 146-378 (390)
280 2eu9_A Dual specificity protei 100.0 1.2E-35 4.2E-40 331.7 16.9 279 625-926 18-333 (355)
281 3qa8_A MGC80376 protein; kinas 100.0 4.1E-36 1.4E-40 352.0 13.5 287 625-934 13-310 (676)
282 1ogq_A PGIP-2, polygalacturona 100.0 6.4E-36 2.2E-40 326.8 14.3 255 295-552 51-310 (313)
283 3uqc_A Probable conserved tran 100.0 3.1E-35 1.1E-39 316.9 18.9 241 626-942 31-274 (286)
284 4fcg_A Uncharacterized protein 100.0 9.1E-36 3.1E-40 327.6 14.2 273 17-379 21-314 (328)
285 2rio_A Serine/threonine-protei 100.0 1.4E-35 4.9E-40 339.3 16.1 256 627-926 16-295 (434)
286 2dyl_A Dual specificity mitoge 100.0 1.1E-35 3.7E-40 326.7 13.5 253 625-926 24-283 (318)
287 3p23_A Serine/threonine-protei 100.0 4.5E-35 1.5E-39 333.9 16.1 249 626-926 24-283 (432)
288 2pzi_A Probable serine/threoni 100.0 1E-34 3.4E-39 351.5 17.7 246 626-933 80-328 (681)
289 3dzo_A Rhoptry kinase domain; 100.0 6.2E-35 2.1E-39 331.8 12.8 251 626-926 78-363 (413)
290 4fmz_A Internalin; leucine ric 100.0 1.4E-33 4.9E-38 313.9 21.9 168 296-500 179-346 (347)
291 4fmz_A Internalin; leucine ric 100.0 1.3E-33 4.4E-38 314.3 21.3 305 158-523 41-346 (347)
292 3m2w_A MAP kinase-activated pr 100.0 1.3E-33 4.4E-38 307.1 17.8 236 625-926 16-256 (299)
293 2ft3_A Biglycan; proteoglycan, 100.0 6.4E-33 2.2E-37 306.4 23.6 126 91-222 35-160 (332)
294 2ft3_A Biglycan; proteoglycan, 100.0 7.2E-33 2.5E-37 306.0 21.7 83 113-222 33-115 (332)
295 1xku_A Decorin; proteoglycan, 100.0 1.5E-32 5.3E-37 303.1 24.1 277 89-474 52-330 (330)
296 1xku_A Decorin; proteoglycan, 100.0 2.2E-32 7.7E-37 301.8 21.9 289 113-497 31-329 (330)
297 2vuw_A Serine/threonine-protei 100.0 4.4E-34 1.5E-38 316.4 7.7 196 625-844 19-278 (336)
298 1z7x_W Ribonuclease inhibitor; 100.0 2.7E-36 9.2E-41 349.9 -18.5 384 90-526 4-443 (461)
299 1z7x_W Ribonuclease inhibitor; 100.0 6.7E-35 2.3E-39 338.1 -14.2 353 66-452 4-411 (461)
300 2z80_A TOLL-like receptor 2, v 100.0 5.3E-31 1.8E-35 293.7 16.5 291 45-407 22-318 (353)
301 2z80_A TOLL-like receptor 2, v 100.0 3.3E-30 1.1E-34 287.3 13.6 107 112-221 30-136 (353)
302 3g06_A SSPH2 (leucine-rich rep 100.0 3.2E-30 1.1E-34 304.5 14.2 296 38-439 7-308 (622)
303 3ogk_B Coronatine-insensitive 100.0 8.9E-34 3.1E-38 339.7 -16.6 434 51-502 40-528 (592)
304 2z66_A Variable lymphocyte rec 100.0 2.4E-29 8.1E-34 274.4 16.7 250 272-527 10-265 (306)
305 3zyi_A Leucine-rich repeat-con 100.0 6.9E-29 2.4E-33 286.2 21.3 228 89-379 75-303 (452)
306 1wwl_A Monocyte differentiatio 100.0 3.3E-31 1.1E-35 289.6 1.4 152 42-198 20-186 (312)
307 2z66_A Variable lymphocyte rec 100.0 5.4E-29 1.8E-33 271.6 18.7 282 164-485 10-296 (306)
308 4fcg_A Uncharacterized protein 100.0 6.8E-29 2.3E-33 272.8 18.2 226 294-525 81-316 (328)
309 3zyi_A Leucine-rich repeat-con 100.0 3.5E-28 1.2E-32 280.3 21.8 249 271-526 56-306 (452)
310 3o53_A Protein LRIM1, AGAP0063 100.0 8.8E-30 3E-34 279.0 7.7 267 139-481 12-281 (317)
311 1ozn_A Reticulon 4 receptor; N 100.0 1.8E-28 6.3E-33 264.4 17.7 227 272-527 14-242 (285)
312 3zyj_A Leucine-rich repeat-con 100.0 4.6E-28 1.6E-32 278.3 21.5 248 271-525 45-294 (440)
313 3zyj_A Leucine-rich repeat-con 100.0 4.4E-28 1.5E-32 278.4 21.1 244 70-379 48-292 (440)
314 1ozn_A Reticulon 4 receptor; N 100.0 1.5E-28 5E-33 265.1 16.1 252 242-528 14-266 (285)
315 1wwl_A Monocyte differentiatio 100.0 6.6E-30 2.3E-34 279.3 5.1 247 267-525 41-311 (312)
316 3g06_A SSPH2 (leucine-rich rep 100.0 1.1E-27 3.8E-32 282.8 23.0 265 90-460 41-305 (622)
317 3o53_A Protein LRIM1, AGAP0063 99.9 1E-28 3.5E-33 270.5 7.2 269 66-384 11-281 (317)
318 3ogk_B Coronatine-insensitive 99.9 1E-30 3.5E-35 313.1 -11.6 420 65-497 73-548 (592)
319 3oja_A Leucine-rich immune mol 99.9 1.3E-27 4.6E-32 276.9 10.2 238 159-472 32-271 (487)
320 3oja_A Leucine-rich immune mol 99.9 7.7E-28 2.6E-32 278.9 7.9 214 295-523 35-250 (487)
321 2o6q_A Variable lymphocyte rec 99.9 4.4E-26 1.5E-30 243.5 19.4 218 50-356 2-219 (270)
322 4azs_A Methyltransferase WBDD; 99.9 3E-28 1E-32 286.0 2.2 187 633-843 241-438 (569)
323 2z62_A TOLL-like receptor 4, v 99.9 9.9E-26 3.4E-30 241.7 18.6 209 294-527 28-241 (276)
324 2z62_A TOLL-like receptor 4, v 99.9 1.2E-25 4.2E-30 241.0 18.9 225 298-550 11-241 (276)
325 2p1m_B Transport inhibitor res 99.9 3.4E-29 1.2E-33 300.0 -15.6 430 51-499 33-518 (594)
326 2o6q_A Variable lymphocyte rec 99.9 2.6E-24 8.8E-29 229.7 19.9 202 296-501 18-219 (270)
327 3rfs_A Internalin B, repeat mo 99.9 1.3E-24 4.3E-29 232.3 16.7 207 267-486 39-245 (272)
328 1p9a_G Platelet glycoprotein I 99.9 3.3E-24 1.1E-28 230.9 17.7 200 295-525 11-210 (290)
329 3rfs_A Internalin B, repeat mo 99.9 2.3E-24 7.8E-29 230.3 15.6 213 235-466 37-249 (272)
330 2p1m_B Transport inhibitor res 99.9 9.6E-29 3.3E-33 296.1 -20.7 423 65-499 66-543 (594)
331 3m19_A Variable lymphocyte rec 99.9 2E-24 6.8E-29 227.9 14.1 191 51-253 3-193 (251)
332 1p9a_G Platelet glycoprotein I 99.9 8.9E-24 3.1E-28 227.5 16.4 206 263-501 4-209 (290)
333 3en9_A Glycoprotease, O-sialog 99.9 9E-25 3.1E-29 255.1 7.3 186 629-844 339-539 (540)
334 3goz_A Leucine-rich repeat-con 99.9 4.6E-26 1.6E-30 254.4 -5.0 123 319-459 168-304 (362)
335 3goz_A Leucine-rich repeat-con 99.9 1.4E-25 4.7E-30 250.5 -1.4 261 70-362 3-304 (362)
336 3m19_A Variable lymphocyte rec 99.9 2.3E-23 7.8E-28 219.8 14.9 180 295-502 15-194 (251)
337 2xwt_C Thyrotropin receptor; s 99.9 3.4E-23 1.2E-27 216.7 15.5 197 294-520 31-236 (239)
338 2ast_B S-phase kinase-associat 99.9 1.3E-25 4.5E-30 248.3 -3.6 164 50-219 34-205 (336)
339 2xwt_C Thyrotropin receptor; s 99.9 5.2E-23 1.8E-27 215.3 15.8 208 306-544 23-237 (239)
340 4glp_A Monocyte differentiatio 99.9 8.5E-24 2.9E-28 230.6 10.0 199 319-524 92-308 (310)
341 4glp_A Monocyte differentiatio 99.9 2.6E-23 8.8E-28 226.8 12.0 201 294-501 91-308 (310)
342 3cvr_A Invasion plasmid antige 99.9 1.8E-23 6.2E-28 243.7 10.3 136 42-198 32-173 (571)
343 4ay9_X Follicle-stimulating ho 99.9 1.1E-22 3.7E-27 225.8 15.5 222 139-401 32-257 (350)
344 2ca6_A RAN GTPase-activating p 99.9 7.1E-25 2.4E-29 247.2 -4.8 255 104-403 23-316 (386)
345 2ast_B S-phase kinase-associat 99.9 6.7E-24 2.3E-28 234.6 0.8 250 270-528 48-311 (336)
346 1h6u_A Internalin H; cell adhe 99.9 1.8E-22 6.2E-27 219.5 11.9 191 295-502 42-232 (308)
347 1h6u_A Internalin H; cell adhe 99.9 3.2E-22 1.1E-26 217.6 12.5 192 159-403 39-230 (308)
348 4ay9_X Follicle-stimulating ho 99.9 7.1E-22 2.4E-26 219.2 15.6 202 272-478 12-217 (350)
349 2ca6_A RAN GTPase-activating p 99.9 1.5E-24 5.1E-29 244.6 -6.3 200 315-527 91-320 (386)
350 1zar_A RIO2 kinase; serine kin 99.9 3.5E-22 1.2E-26 213.5 10.0 165 618-828 82-274 (282)
351 2o6s_A Variable lymphocyte rec 99.9 2.9E-21 9.9E-26 197.4 16.1 174 319-504 29-202 (208)
352 3cvr_A Invasion plasmid antige 99.9 1.3E-21 4.6E-26 228.0 13.4 186 296-510 61-253 (571)
353 2o6s_A Variable lymphocyte rec 99.8 8E-21 2.8E-25 194.1 15.9 194 272-481 10-203 (208)
354 3e6j_A Variable lymphocyte rec 99.8 7.5E-21 2.6E-25 197.1 15.2 162 45-222 11-172 (229)
355 4b8c_D Glucose-repressible alc 99.8 3.5E-22 1.2E-26 241.9 4.2 191 20-222 129-329 (727)
356 2v9t_B SLIT homolog 2 protein 99.8 5.4E-20 1.8E-24 189.3 14.4 149 71-222 17-165 (220)
357 2v70_A SLIT-2, SLIT homolog 2 99.8 2.7E-19 9.4E-24 184.0 15.8 151 69-222 15-166 (220)
358 1m9s_A Internalin B; cell inva 99.8 8.9E-20 3E-24 215.2 11.8 101 112-220 20-120 (605)
359 1m9s_A Internalin B; cell inva 99.8 1.2E-19 4E-24 214.2 11.6 125 88-222 20-144 (605)
360 1dce_A Protein (RAB geranylger 99.8 2.9E-22 1E-26 235.0 -10.8 217 110-397 346-567 (567)
361 2xot_A Amphoterin-induced prot 99.8 2.6E-19 8.9E-24 199.3 13.3 175 272-452 21-202 (361)
362 2v70_A SLIT-2, SLIT homolog 2 99.8 4.1E-19 1.4E-23 182.7 12.7 155 321-503 14-169 (220)
363 2v9t_B SLIT homolog 2 protein 99.8 8.4E-19 2.9E-23 180.4 14.7 151 298-452 15-165 (220)
364 2xot_A Amphoterin-induced prot 99.8 4.8E-19 1.6E-23 197.2 13.6 178 296-477 20-203 (361)
365 1h6t_A Internalin B; cell adhe 99.8 6.3E-19 2.2E-23 189.7 12.6 151 314-477 64-214 (291)
366 1h6t_A Internalin B; cell adhe 99.8 2.5E-19 8.5E-24 192.9 8.8 187 298-501 28-214 (291)
367 4b8c_D Glucose-repressible alc 99.8 1E-19 3.6E-24 220.2 6.5 190 324-525 207-406 (727)
368 3e6j_A Variable lymphocyte rec 99.8 2.3E-18 7.8E-23 178.4 14.9 153 296-453 21-173 (229)
369 1dce_A Protein (RAB geranylger 99.8 2.4E-20 8.2E-25 218.8 -1.7 190 315-528 346-551 (567)
370 1xeu_A Internalin C; cellular 99.7 5.7E-19 1.9E-23 187.0 5.7 167 296-502 21-187 (263)
371 1zth_A RIO1 serine protein kin 99.7 3.9E-18 1.3E-22 180.0 11.2 140 626-792 47-220 (258)
372 1xeu_A Internalin C; cellular 99.7 2.1E-18 7.2E-23 182.6 8.5 82 87-174 17-98 (263)
373 4ezg_A Putative uncharacterize 99.7 3.8E-18 1.3E-22 172.4 8.5 154 314-500 40-194 (197)
374 1w8a_A SLIT protein; signaling 99.7 9E-18 3.1E-22 168.7 11.2 130 394-527 12-143 (192)
375 4ezg_A Putative uncharacterize 99.7 1.2E-17 4.3E-22 168.6 11.6 149 66-222 45-194 (197)
376 3sb4_A Hypothetical leucine ri 99.7 6.8E-18 2.3E-22 185.4 10.2 301 78-396 12-327 (329)
377 1w8a_A SLIT protein; signaling 99.7 3.3E-17 1.1E-21 164.6 10.8 131 370-504 12-143 (192)
378 2ell_A Acidic leucine-rich nuc 99.7 4.6E-17 1.6E-21 159.8 9.5 137 87-225 22-163 (168)
379 2o6r_A Variable lymphocyte rec 99.7 3.2E-16 1.1E-20 155.3 12.1 134 52-200 6-139 (177)
380 2je0_A Acidic leucine-rich nuc 99.7 7.7E-17 2.6E-21 154.7 6.8 129 87-217 15-148 (149)
381 2wfh_A SLIT homolog 2 protein 99.6 3.7E-16 1.3E-20 156.8 11.5 125 70-198 15-139 (193)
382 2wfh_A SLIT homolog 2 protein 99.6 5.6E-16 1.9E-20 155.5 10.7 129 393-526 13-142 (193)
383 2ell_A Acidic leucine-rich nuc 99.6 5.5E-16 1.9E-20 152.1 10.2 108 342-452 24-133 (168)
384 3sb4_A Hypothetical leucine ri 99.6 2.1E-15 7.2E-20 165.5 16.0 285 66-373 26-328 (329)
385 2o6r_A Variable lymphocyte rec 99.6 2.7E-15 9.3E-20 148.5 12.9 129 91-222 9-137 (177)
386 4gyi_A RIO2 kinase; protein ki 99.6 3.9E-16 1.3E-20 170.3 6.7 145 620-793 89-267 (397)
387 4fdw_A Leucine rich hypothetic 99.6 3.4E-14 1.2E-18 159.2 20.9 105 295-403 249-358 (401)
388 2je0_A Acidic leucine-rich nuc 99.6 9.5E-16 3.2E-20 147.1 6.5 125 343-470 18-147 (149)
389 4fdw_A Leucine rich hypothetic 99.6 3.5E-14 1.2E-18 159.1 19.8 266 88-403 112-383 (401)
390 1a9n_A U2A', U2A'; complex (nu 99.6 1.6E-15 5.4E-20 150.0 6.5 135 83-223 13-154 (176)
391 1ds9_A Outer arm dynein; leuci 99.6 5.1E-17 1.8E-21 164.2 -5.9 132 361-500 43-185 (198)
392 4fs7_A Uncharacterized protein 99.5 6.3E-13 2.1E-17 149.6 23.1 311 82-447 64-374 (394)
393 1ds9_A Outer arm dynein; leuci 99.5 1.1E-16 3.7E-21 161.8 -7.1 150 295-476 19-185 (198)
394 1a9n_A U2A', U2A'; complex (nu 99.5 9.7E-15 3.3E-19 144.3 7.0 133 265-403 15-153 (176)
395 4fs7_A Uncharacterized protein 99.5 6.8E-13 2.3E-17 149.3 20.2 317 101-496 59-375 (394)
396 3g39_A Variable lymphocyte rec 99.5 1.2E-13 4E-18 135.4 10.8 87 113-199 30-116 (170)
397 3g39_A Variable lymphocyte rec 99.5 1.4E-13 4.9E-18 134.8 10.5 106 114-222 10-115 (170)
398 2r9u_A Variable lymphocyte rec 99.4 2.3E-13 7.8E-18 133.8 11.0 86 113-198 33-118 (174)
399 2r9u_A Variable lymphocyte rec 99.4 2.5E-13 8.5E-18 133.6 10.5 106 115-223 14-119 (174)
400 2ifg_A High affinity nerve gro 99.3 2.2E-12 7.5E-17 142.6 9.0 108 53-198 8-116 (347)
401 2ifg_A High affinity nerve gro 99.3 3.9E-12 1.3E-16 140.6 9.4 106 419-526 12-119 (347)
402 4gt6_A Cell surface protein; l 99.3 3.3E-10 1.1E-14 127.2 23.3 131 83-218 57-191 (394)
403 3un9_A NLR family member X1; l 99.2 9E-14 3.1E-18 154.2 -7.2 38 185-222 155-196 (372)
404 3tm0_A Aminoglycoside 3'-phosp 99.2 2.6E-11 8.9E-16 128.2 10.7 149 620-790 8-213 (263)
405 3un9_A NLR family member X1; l 99.2 6.7E-14 2.3E-18 155.3 -11.1 88 436-523 180-283 (372)
406 4gt6_A Cell surface protein; l 99.2 7.2E-10 2.5E-14 124.5 19.9 115 101-218 51-169 (394)
407 1nd4_A Aminoglycoside 3'-phosp 99.0 5.6E-10 1.9E-14 117.7 7.4 139 625-790 19-214 (264)
408 3rw6_A Nuclear RNA export fact 98.9 2.1E-12 7.2E-17 134.3 -12.3 147 52-202 77-237 (267)
409 4h09_A Hypothetical leucine ri 98.9 6.5E-08 2.2E-12 107.9 21.3 125 85-217 42-166 (379)
410 3sg8_A APH(2'')-ID; antibiotic 98.9 6.8E-10 2.3E-14 119.9 4.7 190 631-843 25-287 (304)
411 3dxp_A Putative acyl-COA dehyd 98.9 6.3E-09 2.1E-13 115.2 12.0 146 630-791 42-249 (359)
412 2ra8_A Uncharacterized protein 98.9 3.3E-10 1.1E-14 124.3 0.5 102 65-169 107-227 (362)
413 2ra8_A Uncharacterized protein 98.8 4E-10 1.4E-14 123.7 0.2 85 437-521 250-341 (362)
414 4h09_A Hypothetical leucine ri 98.8 2.2E-07 7.4E-12 103.6 20.5 134 335-497 210-343 (379)
415 3r70_A Aminoglycoside phosphot 98.5 5.9E-07 2E-11 97.4 12.3 138 627-792 38-239 (320)
416 1io0_A Tropomodulin; LRR prote 98.5 5E-09 1.7E-13 103.7 -4.4 122 81-222 28-164 (185)
417 3rw6_A Nuclear RNA export fact 98.4 2.2E-08 7.5E-13 104.0 -1.7 106 85-191 137-257 (267)
418 4gkh_A Aminoglycoside 3'-phosp 98.3 1.3E-06 4.4E-11 92.3 10.8 145 623-790 22-223 (272)
419 3d1u_A Putative fructosamine-3 98.3 2.7E-06 9.2E-11 90.3 12.8 76 630-715 19-97 (288)
420 1io0_A Tropomodulin; LRR prote 98.3 2.6E-08 8.8E-13 98.6 -3.6 127 105-253 28-165 (185)
421 3tdw_A Gentamicin resistance p 98.3 3.8E-06 1.3E-10 90.3 12.5 137 631-790 24-224 (306)
422 3ovc_A Hygromycin-B 4-O-kinase 98.1 1.1E-05 3.6E-10 88.8 12.0 152 630-792 45-245 (362)
423 3ats_A Putative uncharacterize 98.0 1.1E-05 3.7E-10 88.9 9.3 84 632-717 26-122 (357)
424 2olc_A MTR kinase, methylthior 97.8 1.7E-05 5.8E-10 88.7 7.3 76 631-713 35-120 (397)
425 2q83_A YTAA protein; 2635576, 97.7 0.00024 8.3E-09 77.5 13.9 153 632-790 38-252 (346)
426 3e4g_A ATP synthase subunit S, 97.7 6.2E-06 2.1E-10 79.2 -0.1 34 162-195 115-149 (176)
427 3f7w_A Putative fructosamine-3 97.6 0.00021 7.2E-09 75.8 11.3 78 628-715 17-97 (288)
428 3jr1_A Putative fructosamine-3 97.5 0.0006 2E-08 72.8 12.2 145 631-786 41-232 (312)
429 3e4g_A ATP synthase subunit S, 97.5 3.4E-05 1.2E-09 74.1 2.1 84 318-401 61-150 (176)
430 2pyw_A Uncharacterized protein 97.4 9.9E-05 3.4E-09 83.1 5.7 80 759-840 231-313 (420)
431 3dxq_A Choline/ethanolamine ki 97.2 0.0011 3.9E-08 70.6 11.0 74 628-715 20-95 (301)
432 2qg7_A Ethanolamine kinase PV0 97.2 0.002 6.9E-08 72.6 12.7 75 631-715 113-188 (458)
433 1pgv_A TMD-1, tropomodulin TMD 97.1 3E-05 1E-09 75.9 -3.2 69 82-150 34-111 (197)
434 2ppq_A HSK, HK, homoserine kin 97.0 0.002 7E-08 69.3 10.8 169 616-790 7-217 (322)
435 1nw1_A Choline kinase (49.2 KD 97.0 0.0019 6.5E-08 72.5 10.4 74 631-715 78-159 (429)
436 3feg_A Choline/ethanolamine ki 96.9 0.0021 7E-08 70.5 9.6 145 631-790 55-254 (379)
437 1zyl_A Hypothetical protein YI 96.7 0.016 5.5E-07 62.4 14.1 169 615-790 10-223 (328)
438 3csv_A Aminoglycoside phosphot 96.7 0.0092 3.1E-07 64.5 12.0 33 759-791 182-218 (333)
439 1pgv_A TMD-1, tropomodulin TMD 96.6 0.00014 4.7E-09 71.2 -2.6 115 107-221 35-169 (197)
440 3c5i_A Choline kinase; choline 96.5 0.0053 1.8E-07 67.5 9.0 74 632-715 39-121 (369)
441 3i1a_A Spectinomycin phosphotr 96.3 0.012 4E-07 63.8 10.4 33 759-791 205-237 (339)
442 3rfe_A Platelet glycoprotein I 96.3 0.0042 1.4E-07 56.6 5.7 34 164-197 34-67 (130)
443 3rfe_A Platelet glycoprotein I 96.3 0.005 1.7E-07 56.1 5.9 56 298-355 12-68 (130)
444 3f2s_A CK, chetk-alpha, cholin 95.8 0.03 1E-06 61.5 10.5 145 632-790 58-280 (401)
445 2yle_A Protein spire homolog 1 95.4 0.085 2.9E-06 51.7 10.8 104 712-842 32-135 (229)
446 3mes_A Choline kinase; malaria 95.4 0.031 1.1E-06 62.0 8.5 74 632-715 76-157 (424)
447 3g15_A CK, chetk-alpha, cholin 93.0 0.29 9.8E-06 54.1 9.8 30 761-790 245-280 (401)
448 4ann_A ESSB; membrane protein, 84.3 2.1 7.3E-05 41.8 7.3 88 733-849 76-163 (215)
449 3cxl_A N-chimerin; SH2, RHO-GA 71.6 0.44 1.5E-05 53.6 -2.2 62 629-693 145-214 (463)
450 4ano_A ESSB; membrane protein, 64.7 4 0.00014 40.0 3.4 83 734-845 81-164 (219)
451 2ks1_B Epidermal growth factor 33.1 5.4 0.00018 27.9 -1.1 7 595-601 33-39 (44)
452 2k1k_A Ephrin type-A receptor 31.8 4.9 0.00017 27.1 -1.5 24 575-598 13-36 (38)
453 2lz0_A Uncharacterized protein 31.0 89 0.003 26.1 5.9 47 305-352 7-53 (100)
454 2lz0_A Uncharacterized protein 29.5 97 0.0033 25.9 5.9 40 359-399 13-52 (100)
455 2jwa_A Receptor tyrosine-prote 27.9 4.6 0.00016 28.1 -2.1 8 576-583 15-22 (44)
456 3ox7_P MH027; urokinase-type p 22.8 18 0.00063 20.1 0.0 9 51-59 6-14 (23)
457 1cja_A Protein (actin-fragmin 21.3 2.8E+02 0.0094 28.9 8.5 77 702-790 156-237 (342)
No 1
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=4.8e-74 Score=706.73 Aligned_cols=535 Identities=30% Similarity=0.464 Sum_probs=390.9
Q ss_pred hcCCCChhhHHHHHHHHhccCCCCCCCccCccCCCCcceeeeeEEeCCCCcEEEEEcCCCCCCcc---cc----------
Q 039533 16 VAGTGNETDRVALLEFKSKSTYDPVGVLGTWNESIHFCKWYGVTCSRRHQRVTLLDLRSLKLAGS---VS---------- 82 (949)
Q Consensus 16 ~~~~~~~~~~~aLl~~k~~~~~~~~~~l~sW~~~~~~C~w~gv~C~~~~~~v~~l~l~~~~l~g~---~~---------- 82 (949)
+++.+.++|++|||+||+++. ||. .+++|+.++|||+|.||+|+ ++||+.|||+++++.|. ++
T Consensus 5 ~~~~~~~~~~~all~~k~~~~-~~~-~l~~W~~~~~~C~w~gv~C~--~~~v~~L~L~~~~l~g~~~~l~~~l~~L~~L~ 80 (768)
T 3rgz_A 5 SPSQSLYREIHQLISFKDVLP-DKN-LLPDWSSNKNPCTFDGVTCR--DDKVTSIDLSSKPLNVGFSAVSSSLLSLTGLE 80 (768)
T ss_dssp ---CCHHHHHHHHHHHHTTCS-CTT-SSTTCCTTSCGGGSTTEEEE--TTEEEEEECTTSCCCEEHHHHHHHTTTCTTCC
T ss_pred ccccCCHHHHHHHHHHHhhCC-Ccc-cccCCCCCCCCcCCcceEEC--CCcEEEEECCCCCcCCccCccChhHhccCccc
Confidence 455567899999999999986 888 99999988899999999999 68999999999999987 44
Q ss_pred -------------CCCCCCCCCceeeccCceeccccCC--cccCcccCcEEeeccccccCcCCCCC-CCCccceeecCCC
Q 039533 83 -------------HFIGNLSFLKQLYLQVNSFTHEIPS--EIGGLRRLKVLALNNNSICGEIPTNI-SRCSTLIPIHPQN 146 (949)
Q Consensus 83 -------------~~l~~l~~L~~L~L~~n~l~~~~p~--~~~~l~~L~~L~Ls~N~l~~~~p~~~-~~l~~L~~L~l~~ 146 (949)
+.++++++|++|+|++|.++|.+|. .|+++++|++|+|++|.+++.+|..+ +++++|++|++++
T Consensus 81 ~l~~~~~~~~~l~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~Ls~ 160 (768)
T 3rgz_A 81 SLFLSNSHINGSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLSA 160 (768)
T ss_dssp EEECTTSCEEECCCCCCCCTTCCEEECCSSEEEEEGGGGGGGGGCTTCCEEECCSSEEECCSSCCSCCCCTTCSEEECCS
T ss_pred ccCCcCCCcCCCchhhccCCCCCEEECCCCcCCCcCCChHHHhCCCCCCEEECcCCccCCcCCHHHhccCCCCCEEECCC
Confidence 5788899999999999999999998 89999999999999999988888765 6666666666666
Q ss_pred cccccccccc-------------------------ccCCCCCcEEECCCCCCCCCCCCCcCCCCCccEEeccccccCCCC
Q 039533 147 NQLVGKILSR-------------------------FSSLSKTEILNLGSNHLTGSIPSSLGNLSSIHTISLAYNNLDGTI 201 (949)
Q Consensus 147 n~l~~~~~~~-------------------------~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 201 (949)
|++++..+.. +..+++|++|+|++|.+++.+|. ++++++|++|+|++|++++.+
T Consensus 161 n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~l~~L~~L~Ls~n~l~~~~~~-l~~l~~L~~L~Ls~n~l~~~~ 239 (768)
T 3rgz_A 161 NSISGANVVGWVLSDGCGELKHLAISGNKISGDVDVSRCVNLEFLDVSSNNFSTGIPF-LGDCSALQHLDISGNKLSGDF 239 (768)
T ss_dssp SCCEEETHHHHHHTTCCTTCCEEECCSSEEESCCBCTTCTTCCEEECCSSCCCSCCCB-CTTCCSCCEEECCSSCCCSCH
T ss_pred CccCCcCChhhhhhccCCCCCEEECCCCcccccCCcccCCcCCEEECcCCcCCCCCcc-cccCCCCCEEECcCCcCCCcc
Confidence 6665544332 13555666666666666665554 666666666666666666666
Q ss_pred CCcccCCCccccccccCcccccc---------------cccccCCC-------------------------C-Chhhhcc
Q 039533 202 PNSFGWFENLVFLSLAANNLSVV---------------ENKLTGEV-------------------------P-SLEKLQR 240 (949)
Q Consensus 202 p~~~~~l~~L~~L~Ls~N~l~~~---------------~~~l~~~~-------------------------~-~l~~l~~ 240 (949)
|..|+.+++|++|+|++|.++.. .+.+.|.+ | .+..+++
T Consensus 240 ~~~l~~l~~L~~L~Ls~n~l~~~~~~~~l~~L~~L~L~~n~l~~~ip~~~~~~~~~L~~L~Ls~n~l~~~~p~~~~~l~~ 319 (768)
T 3rgz_A 240 SRAISTCTELKLLNISSNQFVGPIPPLPLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSL 319 (768)
T ss_dssp HHHTTTCSSCCEEECCSSCCEESCCCCCCTTCCEEECCSSEEEESCCCCSCTTCTTCSEEECCSSEEEECCCGGGGGCTT
T ss_pred cHHHhcCCCCCEEECCCCcccCccCccccCCCCEEECcCCccCCccCHHHHhhcCcCCEEECcCCcCCCccchHHhcCCC
Confidence 66666666666666655554311 01111111 1 1233333
Q ss_pred ccccccccCCCC-------------------------CCCCCCcchh-------------------ccccc--cCcccEE
Q 039533 241 LQHFTITSNSLG-------------------------SGGNDDLSFL-------------------CSLTN--ATRLTWM 274 (949)
Q Consensus 241 L~~L~l~~N~l~-------------------------~~~~~~~~~~-------------------~~l~~--~~~L~~L 274 (949)
|++|++++|++. ...+..+... ..+.. +++|++|
T Consensus 320 L~~L~L~~n~l~~~ip~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L 399 (768)
T 3rgz_A 320 LESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQEL 399 (768)
T ss_dssp CCEEECCSSEEEEECCHHHHTTCTTCCEEECCSSEEEECCCTTHHHHTTTCSEEECCSSEEEEECCTTTTCSTTCCCCEE
T ss_pred ccEEECCCCcccCcCCHHHHhcCCCCCEEeCcCCccCccccHHHHhhhcCCcEEEccCCCcCCCcChhhhhcccCCccEE
Confidence 333333333332 1111111000 00001 3345555
Q ss_pred EccCCCCCccCCchhhcccccccEEEccCccccCCCCCCCCCCCcccEEEeecceecccCCCcccccCCCCEEecCCccc
Q 039533 275 HINSNNFGGLLPGCISNLSKTIKTLFLNNNKIYGSIPAGIGNFVNLQRLDMWNNQLSGTIPPAIGELQNLKILGLNRNKL 354 (949)
Q Consensus 275 ~L~~N~l~~~~p~~~~~l~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 354 (949)
++++|++++.+|..+..+ ++|++|+|++|++++.+|..++.+++|++|+|++|.+++.+|..+..+++|+.|+|++|++
T Consensus 400 ~L~~n~l~~~~p~~l~~l-~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l 478 (768)
T 3rgz_A 400 YLQNNGFTGKIPPTLSNC-SELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDL 478 (768)
T ss_dssp ECCSSEEEEECCGGGGGC-TTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCC
T ss_pred ECCCCccccccCHHHhcC-CCCCEEECcCCcccCcccHHHhcCCCCCEEECCCCcccCcCCHHHcCCCCceEEEecCCcc
Confidence 555555555555555555 3466666666666666666666666666666666666666666666777777777777777
Q ss_pred ccccCcccccccccceeecccccccccCCCCCCCCCCCcEEEeeCccccCCCCCcccCCcccceeeccCCCccCCCCccc
Q 039533 355 SGNIPPSIGNLKMLLNLFLNDNFLEVSIPSSLGQCESLIEINLSNNNLSGTIPPQFFSLSSLSISLDWSRNKLTGSLPIE 434 (949)
Q Consensus 355 ~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~l~~~L~ls~N~l~~~~p~~ 434 (949)
++.+|..+.++++|++|+|++|++++.+|.+|+.+++|++|+|++|+++|.+|..+..+++| +.|++++|+++|.+|..
T Consensus 479 ~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L-~~L~Ls~N~l~g~ip~~ 557 (768)
T 3rgz_A 479 TGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSL-IWLDLNTNLFNGTIPAA 557 (768)
T ss_dssp CSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEEECCGGGGGCTTC-CEEECCSSEEESBCCGG
T ss_pred cCcCCHHHhcCCCCCEEEccCCccCCcCChHHhcCCCCCEEECCCCcccCcCCHHHcCCCCC-CEEECCCCccCCcCChH
Confidence 77777777777777777777777777777777777777777777777777777777777777 67777777777766654
Q ss_pred c----------------------------------------------------------------------cccccccee
Q 039533 435 V----------------------------------------------------------------------GKLKILEFL 444 (949)
Q Consensus 435 ~----------------------------------------------------------------------~~l~~L~~L 444 (949)
+ +.+++|++|
T Consensus 558 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~~L~~L 637 (768)
T 3rgz_A 558 MFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFL 637 (768)
T ss_dssp GGTTTTCBCCSTTCSCEEEEEECCSCCTTCCSSEEEEECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCSSSBCCCEE
T ss_pred HhcccchhhhhccccccccccccccccccccccccccccccccchhhhccccccccccccceecccCchhhhccccccEE
Confidence 3 335678899
Q ss_pred eeccccccccCCcccccccchhhcccCccccccccCCCcCCCCCCCEEECCCCcCCCcCcccccCCc-cceEeCCCCcCc
Q 039533 445 YVYENRLEGEIPSTFGNCIRLEQLGMGGNLFQGPISSSLGSLRGLRVLDLSQNNLSGEIPKFLAGLS-LNNLNLSYNDLE 523 (949)
Q Consensus 445 ~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~-L~~l~ls~N~l~ 523 (949)
||++|+++|.+|.+|+++++|+.|+|++|+++|.+|..|+.+++|+.||||+|+++|.+|..+..++ |++||+++|+|+
T Consensus 638 dLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ls~N~l~ 717 (768)
T 3rgz_A 638 DMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLS 717 (768)
T ss_dssp ECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEECCSSEEE
T ss_pred ECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECcCCccc
Confidence 9999999999999999999999999999999999999999999999999999999999999999887 999999999999
Q ss_pred CcccccccccccccccccCCCCCCCCCCCCCCCccccc
Q 039533 524 GMVTTEGVFKNASATRILGNSKLCGGISEFKLPTCVSK 561 (949)
Q Consensus 524 ~~~~~~~~~~~~~~~~~~gn~~~c~~~~~~~~~~c~~~ 561 (949)
|.||..++|..++..+|.||+++||.|.. .|...
T Consensus 718 g~iP~~~~~~~~~~~~~~gN~~Lcg~~l~----~C~~~ 751 (768)
T 3rgz_A 718 GPIPEMGQFETFPPAKFLNNPGLCGYPLP----RCDPS 751 (768)
T ss_dssp EECCSSSSGGGSCGGGGCSCTEEESTTSC----CCCSC
T ss_pred ccCCCchhhccCCHHHhcCCchhcCCCCc----CCCCC
Confidence 99999999999999999999999998753 56543
No 2
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=1.4e-59 Score=564.72 Aligned_cols=480 Identities=20% Similarity=0.229 Sum_probs=410.3
Q ss_pred CCChhhHHHHHHHHhccCCCCCC-------CccCccCCCCccee---eeeEEeCCCCcEEEEEcCCCCCCccccCCCCCC
Q 039533 19 TGNETDRVALLEFKSKSTYDPVG-------VLGTWNESIHFCKW---YGVTCSRRHQRVTLLDLRSLKLAGSVSHFIGNL 88 (949)
Q Consensus 19 ~~~~~~~~aLl~~k~~~~~~~~~-------~l~sW~~~~~~C~w---~gv~C~~~~~~v~~l~l~~~~l~g~~~~~l~~l 88 (949)
+....|++||.+||.+...+++. ...+|+.+++||.| .||+|+.. +||+.|+|++++++|.+|+++++|
T Consensus 26 ~~~~~d~~aL~~~~~~~~~~~w~~~~~~~~~~~~W~~~~~~c~w~~~~GV~C~~~-~~V~~L~L~~~~l~g~lp~~l~~L 104 (636)
T 4eco_A 26 AEYIKDYLALKEIWDALNGKNWSQQGFGTQPGANWNFNKELDMWGAQPGVSLNSN-GRVTGLSLEGFGASGRVPDAIGQL 104 (636)
T ss_dssp CHHHHHHHHHHHHHHHTTGGGCCCCC------CCCCCSSCGGGTTCCTTEEECTT-CCEEEEECTTSCCEEEECGGGGGC
T ss_pred hhHHHHHHHHHHHHHHcCCCCcccCCcCCccCCCCCCCCCcccccCCCCeEEcCC-CCEEEEEecCcccCCcCChHHhcC
Confidence 34467999999999986443333 23489988999999 99999875 899999999999999999999999
Q ss_pred CCCceeeccCcee------cc------ccCCcccCcccCcEEeeccccccCcCCCCCCCC-cc-----------------
Q 039533 89 SFLKQLYLQVNSF------TH------EIPSEIGGLRRLKVLALNNNSICGEIPTNISRC-ST----------------- 138 (949)
Q Consensus 89 ~~L~~L~L~~n~l------~~------~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l-~~----------------- 138 (949)
++|++|+|++|++ .| .+|... +.+|+ +++++|.+.+.+|..++.+ ..
T Consensus 105 ~~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~--~~~l~-l~l~~~~l~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~ 181 (636)
T 4eco_A 105 TELEVLALGSHGEKVNERLFGPKGISANMSDEQ--KQKMR-MHYQKTFVDYDPREDFSDLIKDCINSDPQQKSIKKSSRI 181 (636)
T ss_dssp TTCCEEESCCGGGGGTCCSBSTTSBCTTCCHHH--HHHHH-THHHHHHTCCCGGGGSCHHHHHHHHHCTTSCCCCCCCCC
T ss_pred ccceEEECcCCccccCCccccccccccCchHHH--HHHHH-hhHHHhhhccCchhhHHHHHHHHhhcCcccccccccccc
Confidence 9999999999987 33 455444 67888 9999999999888877632 12
Q ss_pred -ceeecCC--CccccccccccccCCCCCcEEECCCCCCCCC-----------------CCCCcC--CCCCccEEeccccc
Q 039533 139 -LIPIHPQ--NNQLVGKILSRFSSLSKTEILNLGSNHLTGS-----------------IPSSLG--NLSSIHTISLAYNN 196 (949)
Q Consensus 139 -L~~L~l~--~n~l~~~~~~~~~~L~~L~~L~Ls~N~l~~~-----------------~p~~~~--~l~~L~~L~L~~N~ 196 (949)
++.+.+. +|++++ +|..|+++++|++|+|++|.|+|. +|..++ ++++|++|+|++|+
T Consensus 182 ~l~~l~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~ 260 (636)
T 4eco_A 182 TLKDTQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCP 260 (636)
T ss_dssp CCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCT
T ss_pred chhhhhhccccCCCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCc
Confidence 2222222 689999 899999999999999999999986 999999 99999999999999
Q ss_pred cCCCCCCcccCCCccccccccCcc-cccccccccCCCC-Chhhh------ccccccccccCCCCCCCCCCcchhc--ccc
Q 039533 197 LDGTIPNSFGWFENLVFLSLAANN-LSVVENKLTGEVP-SLEKL------QRLQHFTITSNSLGSGGNDDLSFLC--SLT 266 (949)
Q Consensus 197 l~~~~p~~~~~l~~L~~L~Ls~N~-l~~~~~~l~~~~~-~l~~l------~~L~~L~l~~N~l~~~~~~~~~~~~--~l~ 266 (949)
+.+.+|..|+++++|++|+|++|+ ++.. .+| .+.++ ++|++|++++|+++.. +. .+.
T Consensus 261 l~~~~p~~l~~l~~L~~L~Ls~n~~l~~~------~lp~~~~~L~~~~~l~~L~~L~L~~n~l~~i-------p~~~~l~ 327 (636)
T 4eco_A 261 NLTKLPTFLKALPEMQLINVACNRGISGE------QLKDDWQALADAPVGEKIQIIYIGYNNLKTF-------PVETSLQ 327 (636)
T ss_dssp TCSSCCTTTTTCSSCCEEECTTCTTSCHH------HHHHHHHHHHHSGGGGTCCEEECCSSCCSSC-------CCHHHHT
T ss_pred CCccChHHHhcCCCCCEEECcCCCCCccc------cchHHHHhhhccccCCCCCEEECCCCcCCcc-------Cchhhhc
Confidence 999999999999999999999997 6520 233 24454 8999999999999742 33 577
Q ss_pred ccCcccEEEccCCCCCccCCchhhcccccccEEEccCccccCCCCCCCCCCCc-ccEEEeecceecccCCCcccccC--C
Q 039533 267 NATRLTWMHINSNNFGGLLPGCISNLSKTIKTLFLNNNKIYGSIPAGIGNFVN-LQRLDMWNNQLSGTIPPAIGELQ--N 343 (949)
Q Consensus 267 ~~~~L~~L~L~~N~l~~~~p~~~~~l~~~L~~L~L~~N~l~~~~~~~~~~l~~-L~~L~L~~N~l~~~~p~~~~~l~--~ 343 (949)
++++|++|++++|+++|.+| .+..+ ++|++|+|++|+++ .+|..+..+++ |++|+|++|.++ .+|..+..+. +
T Consensus 328 ~l~~L~~L~L~~N~l~g~ip-~~~~l-~~L~~L~L~~N~l~-~lp~~l~~l~~~L~~L~Ls~N~l~-~lp~~~~~~~l~~ 403 (636)
T 4eco_A 328 KMKKLGMLECLYNQLEGKLP-AFGSE-IKLASLNLAYNQIT-EIPANFCGFTEQVENLSFAHNKLK-YIPNIFDAKSVSV 403 (636)
T ss_dssp TCTTCCEEECCSCCCEEECC-CCEEE-EEESEEECCSSEEE-ECCTTSEEECTTCCEEECCSSCCS-SCCSCCCTTCSSC
T ss_pred cCCCCCEEeCcCCcCccchh-hhCCC-CCCCEEECCCCccc-cccHhhhhhcccCcEEEccCCcCc-ccchhhhhcccCc
Confidence 88999999999999999999 77777 46999999999999 88999999999 999999999999 7888888765 8
Q ss_pred CCEEecCCcccccccCcccc-------cccccceeecccccccccCCCCCCCCCCCcEEEeeCccccCCCCCcccCCc--
Q 039533 344 LKILGLNRNKLSGNIPPSIG-------NLKMLLNLFLNDNFLEVSIPSSLGQCESLIEINLSNNNLSGTIPPQFFSLS-- 414 (949)
Q Consensus 344 L~~L~Ls~N~l~~~~p~~~~-------~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~-- 414 (949)
|+.|+|++|++++.+|..+. .+++|+.|+|++|.++...+..+..+++|++|+|++|+++ .+|..++...
T Consensus 404 L~~L~Ls~N~l~~~~p~~l~~~~~~~~~~~~L~~L~Ls~N~l~~lp~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~~~~~ 482 (636)
T 4eco_A 404 MSAIDFSYNEIGSVDGKNFDPLDPTPFKGINVSSINLSNNQISKFPKELFSTGSPLSSINLMGNMLT-EIPKNSLKDENE 482 (636)
T ss_dssp EEEEECCSSCTTTTTTCSSCTTCSSCCCCCCEEEEECCSSCCCSCCTHHHHTTCCCSEEECCSSCCS-BCCSSSSEETTE
T ss_pred cCEEECcCCcCCCcchhhhcccccccccCCCCCEEECcCCccCcCCHHHHccCCCCCEEECCCCCCC-CcCHHHhccccc
Confidence 99999999999999999888 8889999999999999444444566899999999999999 7888766543
Q ss_pred ------ccceeeccCCCccCCCCccccc--cccccceeeeccccccccCCcccccccchhhccc------CccccccccC
Q 039533 415 ------SLSISLDWSRNKLTGSLPIEVG--KLKILEFLYVYENRLEGEIPSTFGNCIRLEQLGM------GGNLFQGPIS 480 (949)
Q Consensus 415 ------~l~~~L~ls~N~l~~~~p~~~~--~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l------~~N~l~~~~~ 480 (949)
+| +.|+|++|+++ .+|..+. .+++|+.|+|++|++++ +|..++.+++|+.|+| ++|++.+.+|
T Consensus 483 ~~~~l~~L-~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~-ip~~~~~l~~L~~L~Ls~N~~ls~N~l~~~~p 559 (636)
T 4eco_A 483 NFKNTYLL-TSIDLRFNKLT-KLSDDFRATTLPYLVGIDLSYNSFSK-FPTQPLNSSTLKGFGIRNQRDAQGNRTLREWP 559 (636)
T ss_dssp ECTTGGGC-CEEECCSSCCC-BCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCSSCCEEECCSCBCTTCCBCCCCCC
T ss_pred cccccCCc-cEEECcCCcCC-ccChhhhhccCCCcCEEECCCCCCCC-cChhhhcCCCCCEEECCCCcccccCcccccCh
Confidence 67 78999999999 7888887 99999999999999997 8999999999999999 5688899999
Q ss_pred CCcCCCCCCCEEECCCCcCCCcCcccccCCccceEeCCCCcCcCcc
Q 039533 481 SSLGSLRGLRVLDLSQNNLSGEIPKFLAGLSLNNLNLSYNDLEGMV 526 (949)
Q Consensus 481 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~l~ls~N~l~~~~ 526 (949)
..++.+++|+.|+|++|+| +.+|..+. .+|+.|++++|++....
T Consensus 560 ~~l~~l~~L~~L~Ls~N~l-~~ip~~~~-~~L~~L~Ls~N~l~~~~ 603 (636)
T 4eco_A 560 EGITLCPSLTQLQIGSNDI-RKVNEKIT-PNISVLDIKDNPNISID 603 (636)
T ss_dssp TTGGGCSSCCEEECCSSCC-CBCCSCCC-TTCCEEECCSCTTCEEE
T ss_pred HHHhcCCCCCEEECCCCcC-CccCHhHh-CcCCEEECcCCCCcccc
Confidence 9999999999999999999 57887765 35999999999887653
No 3
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=2.4e-57 Score=558.24 Aligned_cols=449 Identities=31% Similarity=0.483 Sum_probs=367.4
Q ss_pred CcEEEEEcCCCCCCccccCCCCCCCCCceeeccCceeccccCCcccCcccCcEEeeccccccCcCCCCCCCCccceeecC
Q 039533 65 QRVTLLDLRSLKLAGSVSHFIGNLSFLKQLYLQVNSFTHEIPSEIGGLRRLKVLALNNNSICGEIPTNISRCSTLIPIHP 144 (949)
Q Consensus 65 ~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l 144 (949)
.+++.|+|++|.+++.++. ++++++|++|+|++|.+++.+|..|+++++|++|+|++|.+++.+|.. .+++|++|++
T Consensus 200 ~~L~~L~Ls~n~l~~~~~~-l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~--~l~~L~~L~L 276 (768)
T 3rgz_A 200 VNLEFLDVSSNNFSTGIPF-LGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPL--PLKSLQYLSL 276 (768)
T ss_dssp TTCCEEECCSSCCCSCCCB-CTTCCSCCEEECCSSCCCSCHHHHTTTCSSCCEEECCSSCCEESCCCC--CCTTCCEEEC
T ss_pred CcCCEEECcCCcCCCCCcc-cccCCCCCEEECcCCcCCCcccHHHhcCCCCCEEECCCCcccCccCcc--ccCCCCEEEC
Confidence 3566777777777776665 777777777777777777777777777777777777777777666654 6677777777
Q ss_pred CCccccccccccccCC-CCCcEEECCCCCCCCCCCCCcCCCCCccEEeccccccCCCCCCc-ccCCCccccccccCcccc
Q 039533 145 QNNQLVGKILSRFSSL-SKTEILNLGSNHLTGSIPSSLGNLSSIHTISLAYNNLDGTIPNS-FGWFENLVFLSLAANNLS 222 (949)
Q Consensus 145 ~~n~l~~~~~~~~~~L-~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~-~~~l~~L~~L~Ls~N~l~ 222 (949)
++|++++.+|..+..+ ++|++|+|++|++++.+|..|+++++|++|+|++|+++|.+|.. |+.+++|++|+|++|+++
T Consensus 277 ~~n~l~~~ip~~~~~~~~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~ip~~~l~~l~~L~~L~Ls~n~l~ 356 (768)
T 3rgz_A 277 AENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFS 356 (768)
T ss_dssp CSSEEEESCCCCSCTTCTTCSEEECCSSEEEECCCGGGGGCTTCCEEECCSSEEEEECCHHHHTTCTTCCEEECCSSEEE
T ss_pred cCCccCCccCHHHHhhcCcCCEEECcCCcCCCccchHHhcCCCccEEECCCCcccCcCCHHHHhcCCCCCEEeCcCCccC
Confidence 7777776666666554 77777777777777777777777777777777777777666654 777777777777777654
Q ss_pred cccccccCCCC-Chhhhc-cccccccccCCCCCCCCCCc--------------------chhccccccCcccEEEccCCC
Q 039533 223 VVENKLTGEVP-SLEKLQ-RLQHFTITSNSLGSGGNDDL--------------------SFLCSLTNATRLTWMHINSNN 280 (949)
Q Consensus 223 ~~~~~l~~~~~-~l~~l~-~L~~L~l~~N~l~~~~~~~~--------------------~~~~~l~~~~~L~~L~L~~N~ 280 (949)
+.+| .+..++ +|++|++++|++....+..+ ..+..+.++++|++|++++|+
T Consensus 357 -------~~~p~~l~~l~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~ 429 (768)
T 3rgz_A 357 -------GELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNY 429 (768)
T ss_dssp -------ECCCTTHHHHTTTCSEEECCSSEEEEECCTTTTCSTTCCCCEEECCSSEEEEECCGGGGGCTTCCEEECCSSE
T ss_pred -------ccccHHHHhhhcCCcEEEccCCCcCCCcChhhhhcccCCccEEECCCCccccccCHHHhcCCCCCEEECcCCc
Confidence 2222 244444 55555555555432111110 234467889999999999999
Q ss_pred CCccCCchhhcccccccEEEccCccccCCCCCCCCCCCcccEEEeecceecccCCCcccccCCCCEEecCCcccccccCc
Q 039533 281 FGGLLPGCISNLSKTIKTLFLNNNKIYGSIPAGIGNFVNLQRLDMWNNQLSGTIPPAIGELQNLKILGLNRNKLSGNIPP 360 (949)
Q Consensus 281 l~~~~p~~~~~l~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~ 360 (949)
+++.+|..+..++ +|++|+|++|++++.+|..+..+++|++|+|++|++++.+|..+.++++|++|+|++|++++.+|.
T Consensus 430 l~~~~p~~l~~l~-~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~ 508 (768)
T 3rgz_A 430 LSGTIPSSLGSLS-KLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPK 508 (768)
T ss_dssp EESCCCGGGGGCT-TCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCG
T ss_pred ccCcccHHHhcCC-CCCEEECCCCcccCcCCHHHcCCCCceEEEecCCcccCcCCHHHhcCCCCCEEEccCCccCCcCCh
Confidence 9999999999985 699999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccccceeecccccccccCCCCCCCCCCCcEEEeeCccccCCCCCcccC----------------------------
Q 039533 361 SIGNLKMLLNLFLNDNFLEVSIPSSLGQCESLIEINLSNNNLSGTIPPQFFS---------------------------- 412 (949)
Q Consensus 361 ~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~---------------------------- 412 (949)
+++++++|++|+|++|++++.+|..+.++++|++|++++|+++|.+|..++.
T Consensus 509 ~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 588 (768)
T 3rgz_A 509 WIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECH 588 (768)
T ss_dssp GGGGCTTCCEEECCSSCCEEECCGGGGGCTTCCEEECCSSEEESBCCGGGGTTTTCBCCSTTCSCEEEEEECCSCCTTCC
T ss_pred HHhcCCCCCEEECCCCcccCcCCHHHcCCCCCCEEECCCCccCCcCChHHhcccchhhhhcccccccccccccccccccc
Confidence 9999999999999999999999999999999999999999999999876644
Q ss_pred ------------------------------------------CcccceeeccCCCccCCCCccccccccccceeeecccc
Q 039533 413 ------------------------------------------LSSLSISLDWSRNKLTGSLPIEVGKLKILEFLYVYENR 450 (949)
Q Consensus 413 ------------------------------------------l~~l~~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 450 (949)
++++ +.|||++|+++|.+|..++.++.|+.|+|++|+
T Consensus 589 ~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~~L-~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~ 667 (768)
T 3rgz_A 589 GAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSM-MFLDMSYNMLSGYIPKEIGSMPYLFILNLGHND 667 (768)
T ss_dssp SSEEEEECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCSSSBCC-CEEECCSSCCBSCCCGGGGGCTTCCEEECCSSC
T ss_pred ccccccccccccchhhhccccccccccccceecccCchhhhccccc-cEEECcCCcccccCCHHHhccccCCEEeCcCCc
Confidence 2345 679999999999999999999999999999999
Q ss_pred ccccCCcccccccchhhcccCccccccccCCCcCCCCCCCEEECCCCcCCCcCcccccCCccceEeCCCCc-CcCc
Q 039533 451 LEGEIPSTFGNCIRLEQLGMGGNLFQGPISSSLGSLRGLRVLDLSQNNLSGEIPKFLAGLSLNNLNLSYND-LEGM 525 (949)
Q Consensus 451 l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~l~ls~N~-l~~~ 525 (949)
++|.+|..|+++++|+.|||++|+++|.+|..++.+++|++||||+|+|+|.||......++....+.+|+ |+|.
T Consensus 668 l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ls~N~l~g~iP~~~~~~~~~~~~~~gN~~Lcg~ 743 (768)
T 3rgz_A 668 ISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQFETFPPAKFLNNPGLCGY 743 (768)
T ss_dssp CCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEECCSSEEEEECCSSSSGGGSCGGGGCSCTEEEST
T ss_pred cCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECcCCcccccCCCchhhccCCHHHhcCCchhcCC
Confidence 99999999999999999999999999999999999999999999999999999986443346666677775 6664
No 4
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=2.6e-57 Score=552.44 Aligned_cols=463 Identities=19% Similarity=0.221 Sum_probs=326.3
Q ss_pred cCCCChhhHHHHHHHHhccCCCCCCCccCccCCC-----Cc--cee------------eeeEEeCCCCcEEEEEcCCCCC
Q 039533 17 AGTGNETDRVALLEFKSKSTYDPVGVLGTWNESI-----HF--CKW------------YGVTCSRRHQRVTLLDLRSLKL 77 (949)
Q Consensus 17 ~~~~~~~~~~aLl~~k~~~~~~~~~~l~sW~~~~-----~~--C~w------------~gv~C~~~~~~v~~l~l~~~~l 77 (949)
++++..+|++||++||+++ .+| +|+.+. +| |+| .||+|+. ++||+.|+|+++++
T Consensus 263 ~~~~~~~d~~ALl~~k~~l-~~~-----~W~~~~~~~~~~~~~C~W~~~~~~~~w~~~~GV~C~~-~~~V~~L~Ls~~~L 335 (876)
T 4ecn_A 263 ETAEYIKDYKALKAIWEAL-DGK-----NWRYYSGTINNTIHSLNWNFNKELDMWGDQPGVDLDN-NGRVTGLSLAGFGA 335 (876)
T ss_dssp CCCHHHHHHHHHHHHHHHT-TGG-----GCCCCCSSCSSCCCCCSCCCSSCGGGTTCCTTEEECT-TSCEEEEECTTTCC
T ss_pred ccccchHHHHHHHHHHHHc-CCC-----CCCcCCCcccccCCccccccccccccccCcCceEecC-CCCEEEEECccCCC
Confidence 3445578999999999987 355 786544 55 999 9999987 58999999999999
Q ss_pred CccccCCCCCCCCCceeec-cCceeccccCCcc-----------------------------------------------
Q 039533 78 AGSVSHFIGNLSFLKQLYL-QVNSFTHEIPSEI----------------------------------------------- 109 (949)
Q Consensus 78 ~g~~~~~l~~l~~L~~L~L-~~n~l~~~~p~~~----------------------------------------------- 109 (949)
+|.+|++|++|++|++|+| ++|.++|..|-..
T Consensus 336 ~G~ip~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~l~~~~l~~~~~~~ 415 (876)
T 4ecn_A 336 KGRVPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSDLLQDAINRNPEMK 415 (876)
T ss_dssp EEEECGGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHTCTTSC
T ss_pred CCcCchHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhHHHHHHhhhCcccc
Confidence 9999999999999999999 8999988744221
Q ss_pred ----cCcccCcEEeecc--ccccCcCCCCCCCCccceeecCCCccccc-----------------ccccccc--CCCCCc
Q 039533 110 ----GGLRRLKVLALNN--NSICGEIPTNISRCSTLIPIHPQNNQLVG-----------------KILSRFS--SLSKTE 164 (949)
Q Consensus 110 ----~~l~~L~~L~Ls~--N~l~~~~p~~~~~l~~L~~L~l~~n~l~~-----------------~~~~~~~--~L~~L~ 164 (949)
.....++.+.++. |+++| +|..|+++++|++|+|++|.+++ .+|..++ ++++|+
T Consensus 416 ~i~~~~~l~l~~l~l~~~~N~L~~-IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~ 494 (876)
T 4ecn_A 416 PIKKDSRISLKDTQIGNLTNRITF-ISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLT 494 (876)
T ss_dssp CCCCCCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCC
T ss_pred ccccccccchhhceeccccCcccc-hhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCC
Confidence 1122334444443 88887 89999999999999999999988 3777776 999999
Q ss_pred EEECCCCCCCCCCCCCcCCCCCccEEeccccc-cCC-CCCCcccCCC-------ccccccccCcccccccccccCCCCCh
Q 039533 165 ILNLGSNHLTGSIPSSLGNLSSIHTISLAYNN-LDG-TIPNSFGWFE-------NLVFLSLAANNLSVVENKLTGEVPSL 235 (949)
Q Consensus 165 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~-l~~-~~p~~~~~l~-------~L~~L~Ls~N~l~~~~~~l~~~~~~l 235 (949)
+|+|++|.+.+.+|..|+++++|++|+|++|+ ++| .+|..++.++ +|++|+|++|+++.++. ...+
T Consensus 495 ~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~~ip~-----~~~l 569 (876)
T 4ecn_A 495 DVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLEEFPA-----SASL 569 (876)
T ss_dssp EEEEESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCCBCCC-----HHHH
T ss_pred EEECcCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCCccCC-----hhhh
Confidence 99999999999999999999999999999998 888 7887776665 99999999998764432 0025
Q ss_pred hhhccccccccccCCCCCCCCCCcchhccccccCcccEEEccCCCCCccCCchhhcccccccEEEccCccccCCCCCCCC
Q 039533 236 EKLQRLQHFTITSNSLGSGGNDDLSFLCSLTNATRLTWMHINSNNFGGLLPGCISNLSKTIKTLFLNNNKIYGSIPAGIG 315 (949)
Q Consensus 236 ~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~~~~L~~L~L~~N~l~~~~p~~~~~l~~~L~~L~L~~N~l~~~~~~~~~ 315 (949)
.++++|++|+|++|+++..+ .+.++++|+.|+|++|+++ .+|..+..++.+|++|+|++|+|+ .+|..+.
T Consensus 570 ~~L~~L~~L~Ls~N~l~~lp--------~~~~L~~L~~L~Ls~N~l~-~lp~~l~~l~~~L~~L~Ls~N~L~-~lp~~~~ 639 (876)
T 4ecn_A 570 QKMVKLGLLDCVHNKVRHLE--------AFGTNVKLTDLKLDYNQIE-EIPEDFCAFTDQVEGLGFSHNKLK-YIPNIFN 639 (876)
T ss_dssp TTCTTCCEEECTTSCCCBCC--------CCCTTSEESEEECCSSCCS-CCCTTSCEECTTCCEEECCSSCCC-SCCSCCC
T ss_pred hcCCCCCEEECCCCCcccch--------hhcCCCcceEEECcCCccc-cchHHHhhccccCCEEECcCCCCC-cCchhhh
Confidence 56667777777777665211 4556666777777777766 566666666433777777777766 5666665
Q ss_pred CCCc--ccEEEeecceecccCCCcc---c--ccCCCCEEecCCcccccccCccc-ccccccceeecccccccccCCCCCC
Q 039533 316 NFVN--LQRLDMWNNQLSGTIPPAI---G--ELQNLKILGLNRNKLSGNIPPSI-GNLKMLLNLFLNDNFLEVSIPSSLG 387 (949)
Q Consensus 316 ~l~~--L~~L~L~~N~l~~~~p~~~---~--~l~~L~~L~Ls~N~l~~~~p~~~-~~l~~L~~L~L~~N~l~~~~p~~~~ 387 (949)
.++. |+.|+|++|++++.+|... . .+++|+.|+|++|+|+ .+|..+ ..+++|+.|+|++|+++ .+|..+.
T Consensus 640 ~~~~~~L~~L~Ls~N~l~g~ip~l~~~l~~~~~~~L~~L~Ls~N~L~-~lp~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~ 717 (876)
T 4ecn_A 640 AKSVYVMGSVDFSYNKIGSEGRNISCSMDDYKGINASTVTLSYNEIQ-KFPTELFATGSPISTIILSNNLMT-SIPENSL 717 (876)
T ss_dssp TTCSSCEEEEECCSSCTTTTSSSCSSCTTTCCCCCEEEEECCSSCCC-SCCHHHHHTTCCCSEEECCSCCCS-CCCTTSS
T ss_pred ccccCCCCEEECcCCcCCCccccchhhhccccCCCcCEEEccCCcCC-ccCHHHHccCCCCCEEECCCCcCC-ccChHHh
Confidence 5543 7777777777766554322 2 2336667777777766 444443 35666666666666666 4444332
Q ss_pred CC--------CCCcEEEeeCccccCCCCCccc--CCcccceeeccCCCccCCCCccccccccccceeeeccccccccCCc
Q 039533 388 QC--------ESLIEINLSNNNLSGTIPPQFF--SLSSLSISLDWSRNKLTGSLPIEVGKLKILEFLYVYENRLEGEIPS 457 (949)
Q Consensus 388 ~l--------~~L~~L~l~~N~l~~~~p~~~~--~l~~l~~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~ 457 (949)
.. ++|+.|+|++|+|+ .+|..++ .+++| +.|+|++|++++ +|..+..+++|+.|+|++|+
T Consensus 718 ~~~~~~l~nl~~L~~L~Ls~N~L~-~lp~~l~~~~l~~L-~~L~Ls~N~L~~-lp~~l~~L~~L~~L~Ls~N~------- 787 (876)
T 4ecn_A 718 KPKDGNYKNTYLLTTIDLRFNKLT-SLSDDFRATTLPYL-SNMDVSYNCFSS-FPTQPLNSSQLKAFGIRHQR------- 787 (876)
T ss_dssp SCTTSCCTTGGGCCEEECCSSCCC-CCCGGGSTTTCTTC-CEEECCSSCCSS-CCCGGGGCTTCCEEECCCCB-------
T ss_pred ccccccccccCCccEEECCCCCCc-cchHHhhhccCCCc-CEEEeCCCCCCc-cchhhhcCCCCCEEECCCCC-------
Confidence 21 26666666666666 5666655 56666 556666666664 55566666666666665543
Q ss_pred ccccccchhhcccCccccccccCCCcCCCCCCCEEECCCCcCCCcCcccccCCccceEeCCCCcCcCccc
Q 039533 458 TFGNCIRLEQLGMGGNLFQGPISSSLGSLRGLRVLDLSQNNLSGEIPKFLAGLSLNNLNLSYNDLEGMVT 527 (949)
Q Consensus 458 ~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~l~ls~N~l~~~~~ 527 (949)
++++|++.+.+|..|..+++|+.|+|++|+| +.+|..+. .+|+.|+|++|++....+
T Consensus 788 -----------~ls~N~l~~~ip~~l~~L~~L~~L~Ls~N~L-~~Ip~~l~-~~L~~LdLs~N~l~~i~~ 844 (876)
T 4ecn_A 788 -----------DAEGNRILRQWPTGITTCPSLIQLQIGSNDI-RKVDEKLT-PQLYILDIADNPNISIDV 844 (876)
T ss_dssp -----------CTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSCCC-SSSCEEECCSCTTCEEEC
T ss_pred -----------CcccccccccChHHHhcCCCCCEEECCCCCC-CccCHhhc-CCCCEEECCCCCCCccCh
Confidence 3345777777777777777788888888877 56776654 257778888887766543
No 5
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=6.4e-55 Score=524.72 Aligned_cols=484 Identities=18% Similarity=0.173 Sum_probs=429.9
Q ss_pred eeeeEEeCC---------CCcEEEEEcCCCCCCccccCCCCCCCCCceeeccCceeccccCCcccCcccCcEEeeccccc
Q 039533 55 WYGVTCSRR---------HQRVTLLDLRSLKLAGSVSHFIGNLSFLKQLYLQVNSFTHEIPSEIGGLRRLKVLALNNNSI 125 (949)
Q Consensus 55 w~gv~C~~~---------~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l 125 (949)
+..|.|... ...++.|||++|.+++..+..|+++++|++|+|++|.+++..|.+|+++++|++|+|++|++
T Consensus 14 ~~~~~c~~~~l~~iP~~l~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l 93 (606)
T 3t6q_A 14 NKTYNCENLGLNEIPGTLPNSTECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPL 93 (606)
T ss_dssp TTEEECTTSCCSSCCTTSCTTCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCC
T ss_pred CceEECCCCCcccCcCCCCCcCcEEEccCCccCcCChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCcc
Confidence 345778643 24689999999999988899999999999999999999999999999999999999999999
Q ss_pred cCcCCCCCCCCccceeecCCCccccccccccccCCCCCcEEECCCCCCCCCCCCCcCCCCCccEEeccccccCCCCCCcc
Q 039533 126 CGEIPTNISRCSTLIPIHPQNNQLVGKILSRFSSLSKTEILNLGSNHLTGSIPSSLGNLSSIHTISLAYNNLDGTIPNSF 205 (949)
Q Consensus 126 ~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~ 205 (949)
++..|..|+++++|++|++++|++++..+..|.++++|++|+|++|++++..+..+..+++|++|+|++|++++..|..|
T Consensus 94 ~~~~~~~~~~l~~L~~L~L~~n~i~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~ 173 (606)
T 3t6q_A 94 IFMAETALSGPKALKHLFFIQTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLSKEDM 173 (606)
T ss_dssp SEECTTTTSSCTTCCEEECTTSCCSCGGGSCCTTCTTCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSCCCEECHHHH
T ss_pred cccChhhhcccccccEeeccccCcccCCcchhccCCcccEEECCCCcccccCcccccCCcccCEEEcccCcccccChhhh
Confidence 98899999999999999999999999989999999999999999999997554555569999999999999998889999
Q ss_pred cCCCccc--cccccCcccccccccccCCC-----------------------------------------C--Chhhhc-
Q 039533 206 GWFENLV--FLSLAANNLSVVENKLTGEV-----------------------------------------P--SLEKLQ- 239 (949)
Q Consensus 206 ~~l~~L~--~L~Ls~N~l~~~~~~l~~~~-----------------------------------------~--~l~~l~- 239 (949)
+.+++|+ +|++++|.++.++....... + .+..+.
T Consensus 174 ~~l~~L~~l~L~l~~n~l~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~~~l~~l~~~~~~~~~~~~i~~~~~~~l~~ 253 (606)
T 3t6q_A 174 SSLQQATNLSLNLNGNDIAGIEPGAFDSAVFQSLNFGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGLCE 253 (606)
T ss_dssp HTTTTCCSEEEECTTCCCCEECTTTTTTCEEEEEECTTCSCHHHHHHHTTTCEEEEEECCCCTTSCCCCCCGGGGGGGGG
T ss_pred hhhcccceeEEecCCCccCccChhHhhhccccccccCCchhHHHHhhhccccchhheechhhccccccccChhHhchhhc
Confidence 9999999 89999999987665433211 0 011121
Q ss_pred -cccccccccCCCCCCCCCCcchhccccccCcccEEEccCCCCCccCCchhhcccccccEEEccCccccCCCCCCCCCCC
Q 039533 240 -RLQHFTITSNSLGSGGNDDLSFLCSLTNATRLTWMHINSNNFGGLLPGCISNLSKTIKTLFLNNNKIYGSIPAGIGNFV 318 (949)
Q Consensus 240 -~L~~L~l~~N~l~~~~~~~~~~~~~l~~~~~L~~L~L~~N~l~~~~p~~~~~l~~~L~~L~L~~N~l~~~~~~~~~~l~ 318 (949)
+|++|++++|.++..+.. .+.++++|++|++++|+++ .+|..+..+ ++|++|++++|++++..|..+..++
T Consensus 254 ~~L~~L~l~~n~l~~~~~~------~~~~l~~L~~L~l~~n~l~-~lp~~l~~l-~~L~~L~l~~n~l~~~~~~~~~~l~ 325 (606)
T 3t6q_A 254 MSVESINLQKHYFFNISSN------TFHCFSGLQELDLTATHLS-ELPSGLVGL-STLKKLVLSANKFENLCQISASNFP 325 (606)
T ss_dssp SEEEEEECTTCCCSSCCTT------TTTTCTTCSEEECTTSCCS-CCCSSCCSC-TTCCEEECTTCCCSBGGGGCGGGCT
T ss_pred CceeEEEeecCccCccCHH------HhccccCCCEEeccCCccC-CCChhhccc-ccCCEEECccCCcCcCchhhhhccC
Confidence 688899999988765433 3667899999999999999 677778877 4699999999999988898999999
Q ss_pred cccEEEeecceecccCCC-cccccCCCCEEecCCccccccc--CcccccccccceeecccccccccCCCCCCCCCCCcEE
Q 039533 319 NLQRLDMWNNQLSGTIPP-AIGELQNLKILGLNRNKLSGNI--PPSIGNLKMLLNLFLNDNFLEVSIPSSLGQCESLIEI 395 (949)
Q Consensus 319 ~L~~L~L~~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~~~~--p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 395 (949)
+|++|++++|.+.+.+|. .+.++++|++|+|++|++++.. |..+.++++|++|++++|.+++..|..|..+++|++|
T Consensus 326 ~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 405 (606)
T 3t6q_A 326 SLTHLSIKGNTKRLELGTGCLENLENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELL 405 (606)
T ss_dssp TCSEEECCSCSSCCBCCSSTTTTCTTCCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEE
T ss_pred cCCEEECCCCCcccccchhhhhccCcCCEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCeE
Confidence 999999999999877765 5999999999999999999776 8889999999999999999999999999999999999
Q ss_pred EeeCccccCCCCCc-ccCCcccceeeccCCCccCCCCccccccccccceeeecccccccc---CCcccccccchhhcccC
Q 039533 396 NLSNNNLSGTIPPQ-FFSLSSLSISLDWSRNKLTGSLPIEVGKLKILEFLYVYENRLEGE---IPSTFGNCIRLEQLGMG 471 (949)
Q Consensus 396 ~l~~N~l~~~~p~~-~~~l~~l~~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~---~p~~~~~l~~L~~L~l~ 471 (949)
++++|++++..|.. +..+++| +.|++++|.+++..|..++.+++|++|++++|++++. .+..+..+++|+.|+|+
T Consensus 406 ~l~~n~l~~~~~~~~~~~l~~L-~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls 484 (606)
T 3t6q_A 406 DLAFTRLKVKDAQSPFQNLHLL-KVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLS 484 (606)
T ss_dssp ECTTCCEECCTTCCTTTTCTTC-CEEECTTCCCBTTCTTTTTTCTTCCEEECTTCBCGGGEECSSCGGGGCTTCCEEECT
T ss_pred ECCCCcCCCcccchhhhCcccC-CEEECCCCccCCcCHHHHhCCCCCCEEECCCCCCCccccccchhhccCCCccEEECC
Confidence 99999999877665 7888998 8999999999999999999999999999999999873 34679999999999999
Q ss_pred ccccccccCCCcCCCCCCCEEECCCCcCCCcCcccccCCc-cceEeCCCCcCcCccccc-ccccccccccccCCCCCCC
Q 039533 472 GNLFQGPISSSLGSLRGLRVLDLSQNNLSGEIPKFLAGLS-LNNLNLSYNDLEGMVTTE-GVFKNASATRILGNSKLCG 548 (949)
Q Consensus 472 ~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~-L~~l~ls~N~l~~~~~~~-~~~~~~~~~~~~gn~~~c~ 548 (949)
+|++++..|..|+.+++|+.|+|++|++++.+|..+..++ | .|++++|++++.+|.. ..+..+..+.+.|||+.|.
T Consensus 485 ~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L-~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 562 (606)
T 3t6q_A 485 FCDLSSIDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHLKGI-YLNLASNHISIILPSLLPILSQQRTINLRQNPLDCT 562 (606)
T ss_dssp TSCCCEECTTTTTTCTTCCEEECCSSCCCGGGGGGGTTCCSC-EEECCSSCCCCCCGGGHHHHHTSSEEECTTCCEECS
T ss_pred CCccCccChhhhccccCCCEEECCCCccCcCChhHhCccccc-EEECcCCcccccCHhhcccCCCCCEEeCCCCCcccc
Confidence 9999999999999999999999999999999999999887 8 9999999999988764 5677888999999999984
No 6
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=2.9e-53 Score=517.35 Aligned_cols=489 Identities=21% Similarity=0.250 Sum_probs=385.4
Q ss_pred ceeeeeEEeCC---------CCcEEEEEcCCCCCCccccCCCCCCCCCceeeccCceeccccCCcccCcccCcEEeeccc
Q 039533 53 CKWYGVTCSRR---------HQRVTLLDLRSLKLAGSVSHFIGNLSFLKQLYLQVNSFTHEIPSEIGGLRRLKVLALNNN 123 (949)
Q Consensus 53 C~w~gv~C~~~---------~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N 123 (949)
|.+.-|.|+.. ..+++.|||++|++++..+..++++++|++|+|++|.+++..|..|+++++|++|+|++|
T Consensus 4 ~~~~~~~cs~~~L~~ip~~~~~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n 83 (680)
T 1ziw_A 4 VSHEVADCSHLKLTQVPDDLPTNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHN 83 (680)
T ss_dssp CBSSEEECCSSCCSSCCSCSCTTCSEEECCSSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSS
T ss_pred eECCeeECCCCCccccccccCCCCcEEECCCCCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCC
Confidence 44455666532 247999999999999888888999999999999999999999999999999999999999
Q ss_pred cccCcCCCCCCCCccceeecCCCccccccccccccCCCCCcEEECCCCCCCCCCCCCcCCCCCccEEeccccccCCCCCC
Q 039533 124 SICGEIPTNISRCSTLIPIHPQNNQLVGKILSRFSSLSKTEILNLGSNHLTGSIPSSLGNLSSIHTISLAYNNLDGTIPN 203 (949)
Q Consensus 124 ~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~ 203 (949)
.+++..+..|+++++|++|++++|++++..+..|.++++|++|+|++|.+++..|..++++++|++|+|++|++++..+.
T Consensus 84 ~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~ 163 (680)
T 1ziw_A 84 ELSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSE 163 (680)
T ss_dssp CCCCCCTTTTTTCTTCSEEECCSSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSCCCCBCHH
T ss_pred ccCccChhhhccCCCCCEEECCCCccCccChhHccccCCCCEEECCCCcccccCchhhcccccCCEEEccCCcccccCHH
Confidence 99955555799999999999999999999999999999999999999999999999999999999999999999988777
Q ss_pred ccc--CCCccccccccCcccccccccccCCCC---------------------------------------------Chh
Q 039533 204 SFG--WFENLVFLSLAANNLSVVENKLTGEVP---------------------------------------------SLE 236 (949)
Q Consensus 204 ~~~--~l~~L~~L~Ls~N~l~~~~~~l~~~~~---------------------------------------------~l~ 236 (949)
.++ .+++|++|++++|+++.+.....+.++ .+.
T Consensus 164 ~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~~~~~~ 243 (680)
T 1ziw_A 164 ELDIFANSSLKKLELSSNQIKEFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFL 243 (680)
T ss_dssp HHGGGTTCEESEEECTTCCCCCBCTTGGGGSSEECEEECTTCCCHHHHHHHHHHHHTTSCCCEEECTTSCCCEECTTTTG
T ss_pred HhhccccccccEEECCCCcccccChhhhhhhhhhhhhhccccccChhhHHHHHHHhhhccccEEEccCCcccccChhHhh
Confidence 664 458999999999988765543222211 133
Q ss_pred hhcc--ccccccccCCCCCCCCCCcchhccccccCcccEEEccCCCCCccCCchhhcc----------------------
Q 039533 237 KLQR--LQHFTITSNSLGSGGNDDLSFLCSLTNATRLTWMHINSNNFGGLLPGCISNL---------------------- 292 (949)
Q Consensus 237 ~l~~--L~~L~l~~N~l~~~~~~~~~~~~~l~~~~~L~~L~L~~N~l~~~~p~~~~~l---------------------- 292 (949)
.++. |++|++++|+++...+ ..+..+++|++|++++|++++..|..+..+
T Consensus 244 ~l~~~~L~~L~Ls~n~l~~~~~------~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~~~~~~~~~~~~l 317 (680)
T 1ziw_A 244 GLKWTNLTMLDLSYNNLNVVGN------DSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASL 317 (680)
T ss_dssp GGGGSCCCEEECTTSCCCEECT------TTTTTCTTCCEEECCSCCBSEECTTTTTTCTTCCEEECTTCBCCC------C
T ss_pred ccCcCCCCEEECCCCCcCccCc------ccccCcccccEeeCCCCccCccChhhhcCCCCccEEeccchhhhcccccccc
Confidence 3333 6666666666654322 234556677777777777766655443322
Q ss_pred ----------cccccEEEccCccccCCCCCCCCCCCcccEEEee----------------------------cceecccC
Q 039533 293 ----------SKTIKTLFLNNNKIYGSIPAGIGNFVNLQRLDMW----------------------------NNQLSGTI 334 (949)
Q Consensus 293 ----------~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~----------------------------~N~l~~~~ 334 (949)
.++|++|++++|++++..+..|..+++|++|+++ +|++++..
T Consensus 318 p~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~~~~~~l~~~~f~~~~~~~L~~L~L~~n~l~~~~ 397 (680)
T 1ziw_A 318 PKIDDFSFQWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIE 397 (680)
T ss_dssp CEECTTTTTTCTTCCEEECCSCCBCCCCTTTTTTCTTCCEEECTTCBSCCCEECTTTTGGGTTSCCCEEECTTSCCCEEC
T ss_pred cccChhhcccCCCCCEEECCCCccCCCChhHhccccCCcEEECCCCchhhhhcchhhhcccccCcCceEECCCCCCCeEC
Confidence 1346666666666666666666665555555544 44455555
Q ss_pred CCcccccCCCCEEecCCcccccccC-cccccccccceeecccccccccCCCCCCCCCCCcEEEeeCcccc--CCCCCccc
Q 039533 335 PPAIGELQNLKILGLNRNKLSGNIP-PSIGNLKMLLNLFLNDNFLEVSIPSSLGQCESLIEINLSNNNLS--GTIPPQFF 411 (949)
Q Consensus 335 p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~--~~~p~~~~ 411 (949)
|.+|..+++|+.|+|++|++++.+| ..|.++++|++|++++|++++..+..|..+++|+.|++++|.++ +.+|..+.
T Consensus 398 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~p~~~~ 477 (680)
T 1ziw_A 398 SDAFSWLGHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQ 477 (680)
T ss_dssp TTTTTTCTTCCEEECCSSCCEEECCSGGGTTCTTCCEEECCSCSEEECCTTTTTTCTTCCEEECTTSCCBCTTCSSCTTT
T ss_pred hhhhhCCCCCCEEeCCCCcCccccCcccccCcccccEEecCCCCcceeChhhhhcCcccccchhccccccccccCCcccc
Confidence 6677777777777777777776555 56777777777777777777777777777788888888888776 56788889
Q ss_pred CCcccceeeccCCCccCCCCccccccccccceeeeccccccccCC--------cccccccchhhcccCccccccccCCCc
Q 039533 412 SLSSLSISLDWSRNKLTGSLPIEVGKLKILEFLYVYENRLEGEIP--------STFGNCIRLEQLGMGGNLFQGPISSSL 483 (949)
Q Consensus 412 ~l~~l~~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p--------~~~~~l~~L~~L~l~~N~l~~~~~~~~ 483 (949)
.+++| +.|++++|++++..|..+.++++|++|+|++|++++..+ ..|+++++|+.|+|++|+++...+..|
T Consensus 478 ~l~~L-~~L~Ls~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~ 556 (680)
T 1ziw_A 478 PLRNL-TILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVF 556 (680)
T ss_dssp TCTTC-CEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCGGGGSTTSTTSCCCTTTTCTTCCEEECCSSCCCCCCTTTT
T ss_pred cCCCC-CEEECCCCCCCcCChhhhccccccCEEeCCCCCccccchhhccCCcchhhcCCCCCCEEECCCCCCCCCCHHHc
Confidence 99999 789999999998888889999999999999999986422 247899999999999999996666679
Q ss_pred CCCCCCCEEECCCCcCCCcCcccccCCc-cceEeCCCCcCcCccccc-c-cccccccccccCCCCCCC
Q 039533 484 GSLRGLRVLDLSQNNLSGEIPKFLAGLS-LNNLNLSYNDLEGMVTTE-G-VFKNASATRILGNSKLCG 548 (949)
Q Consensus 484 ~~l~~L~~L~Ls~N~l~~~~p~~~~~~~-L~~l~ls~N~l~~~~~~~-~-~~~~~~~~~~~gn~~~c~ 548 (949)
.++++|+.|||++|+|++.++..+..++ |+.|+|++|.|++.++.. . .+..+..+.+.||||.|.
T Consensus 557 ~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~l~l~~N~~~c~ 624 (680)
T 1ziw_A 557 KDLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRFNPFDCT 624 (680)
T ss_dssp TTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCCCBCCHHHHHHHHTTCSEEECTTCCCCBC
T ss_pred ccccCcceeECCCCCCCcCCHhHhCCCCCCCEEECCCCcCCccChhHhcccccccCEEEccCCCcccC
Confidence 9999999999999999987777777766 999999999999987753 2 577888999999999995
No 7
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=4.3e-53 Score=508.83 Aligned_cols=483 Identities=20% Similarity=0.185 Sum_probs=419.1
Q ss_pred Ccceee----eeEEeCC---------CCcEEEEEcCCCCCCccccCCCCCCCCCceeeccCceeccccCCcccCcccCcE
Q 039533 51 HFCKWY----GVTCSRR---------HQRVTLLDLRSLKLAGSVSHFIGNLSFLKQLYLQVNSFTHEIPSEIGGLRRLKV 117 (949)
Q Consensus 51 ~~C~w~----gv~C~~~---------~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~ 117 (949)
++|.|. .|.|+.. ..+++.|||++|.+++..+..|.++++|++|+|++|.+++..|.+|+++++|++
T Consensus 5 ~~c~~~~~~~~~~c~~~~l~~ip~~~~~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~ 84 (606)
T 3vq2_A 5 NPCIEVVPNITYQCMDQKLSKVPDDIPSSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSN 84 (606)
T ss_dssp -CCEEEETTTEEECTTSCCSSCCTTSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCE
T ss_pred CCceecCCCCceEccCCCcccCCCCCCCCcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCE
Confidence 456664 5777642 257899999999999888889999999999999999999888999999999999
Q ss_pred EeeccccccCcCCCCCCCCccceeecCCCccccccccccccCCCCCcEEECCCCCCCC-CCCCCcCCCCCccEEeccccc
Q 039533 118 LALNNNSICGEIPTNISRCSTLIPIHPQNNQLVGKILSRFSSLSKTEILNLGSNHLTG-SIPSSLGNLSSIHTISLAYNN 196 (949)
Q Consensus 118 L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~L~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~L~~N~ 196 (949)
|+|++|.+++..|..|+++++|++|++++|++++..+..|+++++|++|+|++|.+++ .+|..|+++++|++|+|++|+
T Consensus 85 L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~ 164 (606)
T 3vq2_A 85 LILTGNPIQSFSPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNY 164 (606)
T ss_dssp EECTTCCCCCCCTTSSTTCTTCCEEECTTSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSSC
T ss_pred eECCCCcccccChhhcCCcccCCEEEccCCccccccccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCCc
Confidence 9999999998889999999999999999999999998999999999999999999986 579999999999999999999
Q ss_pred cCCCCCCcccCCCccc----cccccCcccccccccccCCCCChhhhccccccccccCCCCC-------------------
Q 039533 197 LDGTIPNSFGWFENLV----FLSLAANNLSVVENKLTGEVPSLEKLQRLQHFTITSNSLGS------------------- 253 (949)
Q Consensus 197 l~~~~p~~~~~l~~L~----~L~Ls~N~l~~~~~~l~~~~~~l~~l~~L~~L~l~~N~l~~------------------- 253 (949)
+++..|..|+.+++|+ +|++++|.++.++... ....+|++|++++|.+..
T Consensus 165 l~~~~~~~~~~l~~L~~~l~~L~l~~n~l~~~~~~~-------~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~l~l~ 237 (606)
T 3vq2_A 165 IQTITVNDLQFLRENPQVNLSLDMSLNPIDFIQDQA-------FQGIKLHELTLRGNFNSSNIMKTCLQNLAGLHVHRLI 237 (606)
T ss_dssp CCEECTTTTHHHHHCTTCCCEEECTTCCCCEECTTT-------TTTCEEEEEEEESCCSCHHHHHHHHHTTTTCEEEEEE
T ss_pred ceecChhhhhhhhccccccceeeccCCCcceeCccc-------ccCceeeeeeccCCccchhHHHHHhcccccccccccc
Confidence 9998899898888776 7999999998766432 223378888888887641
Q ss_pred --------------------------------CCCCCcchhccccccCcccEEEccCCCCCccCCchhhcccccccEEEc
Q 039533 254 --------------------------------GGNDDLSFLCSLTNATRLTWMHINSNNFGGLLPGCISNLSKTIKTLFL 301 (949)
Q Consensus 254 --------------------------------~~~~~~~~~~~l~~~~~L~~L~L~~N~l~~~~p~~~~~l~~~L~~L~L 301 (949)
....-......+..+++|+.|++++|.+.. +| .+..+ ++|++|++
T Consensus 238 ~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~-l~-~l~~~-~~L~~L~l 314 (606)
T 3vq2_A 238 LGEFKDERNLEIFEPSIMEGLCDVTIDEFRLTYTNDFSDDIVKFHCLANVSAMSLAGVSIKY-LE-DVPKH-FKWQSLSI 314 (606)
T ss_dssp EECCTTSCCCSCCCGGGGTTGGGSEEEEEEECCCTTCCGGGGSCGGGTTCSEEEEESCCCCC-CC-CCCTT-CCCSEEEE
T ss_pred ccccccCCcccccChHHhhhhhhccHhheeccccccccccccccccCCCCCEEEecCccchh-hh-hcccc-ccCCEEEc
Confidence 000111112236778899999999999975 44 56665 46999999
Q ss_pred cCccccCCCCCCCCCCCcccEEEeecceecccCCCcccccCCCCEEecCCcccccc--cCcccccccccceeeccccccc
Q 039533 302 NNNKIYGSIPAGIGNFVNLQRLDMWNNQLSGTIPPAIGELQNLKILGLNRNKLSGN--IPPSIGNLKMLLNLFLNDNFLE 379 (949)
Q Consensus 302 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~--~p~~~~~l~~L~~L~L~~N~l~ 379 (949)
++|++ +.+| .+ .+++|++|++++|...+.+ .+..+++|+.|+|++|++++. +|..+..+++|++|++++|.++
T Consensus 315 ~~n~l-~~lp-~~-~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~ 389 (606)
T 3vq2_A 315 IRCQL-KQFP-TL-DLPFLKSLTLTMNKGSISF--KKVALPSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAI 389 (606)
T ss_dssp ESCCC-SSCC-CC-CCSSCCEEEEESCSSCEEC--CCCCCTTCCEEECCSSCEEEEEECCHHHHCCSCCCEEECCSCSEE
T ss_pred ccccC-cccc-cC-CCCccceeeccCCcCccch--hhccCCCCCEEECcCCccCCCcchhhhhccCCcccEeECCCCccc
Confidence 99999 5788 45 8999999999999665444 677999999999999999976 4889999999999999999998
Q ss_pred ccCCCCCCCCCCCcEEEeeCccccCCCC-CcccCCcccceeeccCCCccCCCCccccccccccceeeeccccccc-cCCc
Q 039533 380 VSIPSSLGQCESLIEINLSNNNLSGTIP-PQFFSLSSLSISLDWSRNKLTGSLPIEVGKLKILEFLYVYENRLEG-EIPS 457 (949)
Q Consensus 380 ~~~p~~~~~l~~L~~L~l~~N~l~~~~p-~~~~~l~~l~~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~-~~p~ 457 (949)
+ +|..|..+++|++|++++|++++..| ..+..+++| +.|++++|.+++..|..++.+++|++|++++|++++ .+|.
T Consensus 390 ~-~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L-~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~ 467 (606)
T 3vq2_A 390 I-MSANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKL-LYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSN 467 (606)
T ss_dssp E-ECCCCTTCTTCCEEECTTSEEESTTTTTTTTTCTTC-CEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECS
T ss_pred c-chhhccCCCCCCeeECCCCccCCccChhhhhccccC-CEEECcCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHH
Confidence 5 67899999999999999999998887 688899999 899999999999999999999999999999999998 4899
Q ss_pred ccccccchhhcccCccccccccCCCcCCCCCCCEEECCCCcCCCcCcccccCCc-cceEeCCCCcCcCccccccccc-cc
Q 039533 458 TFGNCIRLEQLGMGGNLFQGPISSSLGSLRGLRVLDLSQNNLSGEIPKFLAGLS-LNNLNLSYNDLEGMVTTEGVFK-NA 535 (949)
Q Consensus 458 ~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~-L~~l~ls~N~l~~~~~~~~~~~-~~ 535 (949)
.|+.+++|+.|+|++|++++.+|..|+.+++|+.|+|++|++++.+|..+..++ |+.|++++|++++.++....+. ++
T Consensus 468 ~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~p~~~~~l~~~L 547 (606)
T 3vq2_A 468 VFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIETSKGILQHFPKSL 547 (606)
T ss_dssp CCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCEEGGGTTTCTTCCEEECTTSCCCCEESCGGGSCTTC
T ss_pred hhccCCCCCEEECCCCcCCccChhhhcccccCCEEECCCCcCCCcCHHHccCCCcCCEEECCCCcCcccCHhHhhhcccC
Confidence 999999999999999999999999999999999999999999999999998887 9999999999997665544554 47
Q ss_pred ccccccCCCCCCCCC
Q 039533 536 SATRILGNSKLCGGI 550 (949)
Q Consensus 536 ~~~~~~gn~~~c~~~ 550 (949)
..+.+.+||+.|.-+
T Consensus 548 ~~l~l~~N~~~c~c~ 562 (606)
T 3vq2_A 548 AFFNLTNNSVACICE 562 (606)
T ss_dssp CEEECCSCCCCCSST
T ss_pred cEEEccCCCcccCCc
Confidence 888999999999644
No 8
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=3.4e-53 Score=526.61 Aligned_cols=483 Identities=22% Similarity=0.197 Sum_probs=400.4
Q ss_pred ceeeeeEEeCCCCcEEEEEcCCCCCCccccCCCCCCCCCceeeccCceecccc-CCcccCcccCcEEeeccccccCcCCC
Q 039533 53 CKWYGVTCSRRHQRVTLLDLRSLKLAGSVSHFIGNLSFLKQLYLQVNSFTHEI-PSEIGGLRRLKVLALNNNSICGEIPT 131 (949)
Q Consensus 53 C~w~gv~C~~~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~l~~~~-p~~~~~l~~L~~L~Ls~N~l~~~~p~ 131 (949)
|+|.+|.+ -..+++.|||++|.+++..+..|.++++|++|+|++|.+.+.+ |.+|+++++|++|+|++|.+++..|.
T Consensus 14 ~~L~~vP~--lp~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~ 91 (844)
T 3j0a_A 14 CNLTQVPQ--VLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPD 91 (844)
T ss_dssp CCSSCCCS--SCTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTT
T ss_pred CCCCCCCC--CCCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHh
Confidence 56778877 3468999999999999988999999999999999999777777 78899999999999999999988999
Q ss_pred CCCCCccceeecCCCcccccccccc--ccCCCCCcEEECCCCCCCCCCC-CCcCCCCCccEEeccccccCCCCCCcccCC
Q 039533 132 NISRCSTLIPIHPQNNQLVGKILSR--FSSLSKTEILNLGSNHLTGSIP-SSLGNLSSIHTISLAYNNLDGTIPNSFGWF 208 (949)
Q Consensus 132 ~~~~l~~L~~L~l~~n~l~~~~~~~--~~~L~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l 208 (949)
.|+++++|++|+|++|.+++..+.. |.++++|++|+|++|.+++..+ ..|+++++|++|+|++|.+++..|..|+.+
T Consensus 92 ~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~l~~l 171 (844)
T 3j0a_A 92 AFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPL 171 (844)
T ss_dssp SSCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGGGHHH
T ss_pred HccCCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHHHcccc
Confidence 9999999999999999999866554 9999999999999999997765 579999999999999999999999999888
Q ss_pred --CccccccccCcccccccccccCCCCChhhhccccccccccCCCCCCCCCCcchh------------------------
Q 039533 209 --ENLVFLSLAANNLSVVENKLTGEVPSLEKLQRLQHFTITSNSLGSGGNDDLSFL------------------------ 262 (949)
Q Consensus 209 --~~L~~L~Ls~N~l~~~~~~l~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~------------------------ 262 (949)
++|++|+|++|.+......-.+..+..-...+|++|++++|.++......+...
T Consensus 172 ~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~~~~~~~~~~ 251 (844)
T 3j0a_A 172 QGKTLSFFSLAANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMGAGFGFHN 251 (844)
T ss_dssp HHCSSCCCEECCSBSCCCCCCCCCSSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSCCBCSSSCSS
T ss_pred cCCccceEECCCCccccccccchhhcCCccccCceeEEecCCCcCchhHHHHHHhhcCcccccceecccccccccccccc
Confidence 899999999998875332222222221122259999999998765433222110
Q ss_pred ------ccccc--cCcccEEEccCCCCCccCCchhhcccccccEEEccCccccCCCCCCCCCCCcccEEEeecceecccC
Q 039533 263 ------CSLTN--ATRLTWMHINSNNFGGLLPGCISNLSKTIKTLFLNNNKIYGSIPAGIGNFVNLQRLDMWNNQLSGTI 334 (949)
Q Consensus 263 ------~~l~~--~~~L~~L~L~~N~l~~~~p~~~~~l~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 334 (949)
..+.+ .++|+.|++++|.+.+..|..+..++ +|++|+|++|+|++..|..|..+++|++|+|++|.+++..
T Consensus 252 l~~~~~~~f~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~-~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 330 (844)
T 3j0a_A 252 IKDPDQNTFAGLARSSVRHLDLSHGFVFSLNSRVFETLK-DLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELY 330 (844)
T ss_dssp STTGGGTTTTTTTTSCCCEEECTTCCCCEECSCCSSSCC-CCCEEEEESCCCCEECTTTTTTCSSCCEEEEESCCCSCCC
T ss_pred cCCCChhhhhccccCCccEEECCCCcccccChhhhhcCC-CCCEEECCCCcCCCCChHHhcCCCCCCEEECCCCCCCccC
Confidence 01111 26789999999999988888888774 6999999999999888888999999999999999998888
Q ss_pred CCcccccCCCCEEecCCcccccccCcccccccccceeecccccccccCCCCCCCCCCCcEEEeeCccccCCCCCc-----
Q 039533 335 PPAIGELQNLKILGLNRNKLSGNIPPSIGNLKMLLNLFLNDNFLEVSIPSSLGQCESLIEINLSNNNLSGTIPPQ----- 409 (949)
Q Consensus 335 p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~----- 409 (949)
|..|.++++|+.|+|++|++++..+..|.++++|+.|+|++|.+++. ..+++|+.|++++|+++ .+|..
T Consensus 331 ~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~i-----~~~~~L~~L~l~~N~l~-~l~~~~~~l~ 404 (844)
T 3j0a_A 331 SSNFYGLPKVAYIDLQKNHIAIIQDQTFKFLEKLQTLDLRDNALTTI-----HFIPSIPDIFLSGNKLV-TLPKINLTAN 404 (844)
T ss_dssp SCSCSSCTTCCEEECCSCCCCCCCSSCSCSCCCCCEEEEETCCSCCC-----SSCCSCSEEEEESCCCC-CCCCCCTTCC
T ss_pred HHHhcCCCCCCEEECCCCCCCccChhhhcCCCCCCEEECCCCCCCcc-----cCCCCcchhccCCCCcc-cccccccccc
Confidence 88999999999999999999887778899999999999999998742 23667777777777776 45543
Q ss_pred -----------------ccCCcccceeeccCCCccCCCCcc-ccccccccceeeecccccc-----ccCCcccccccchh
Q 039533 410 -----------------FFSLSSLSISLDWSRNKLTGSLPI-EVGKLKILEFLYVYENRLE-----GEIPSTFGNCIRLE 466 (949)
Q Consensus 410 -----------------~~~l~~l~~~L~ls~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~-----~~~p~~~~~l~~L~ 466 (949)
+..+++| +.|+|++|++++..+. .+..+++|+.|+|++|.++ +..|..|.++++|+
T Consensus 405 ~L~ls~N~l~~l~~~~~~~~l~~L-~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~l~~L~ 483 (844)
T 3j0a_A 405 LIHLSENRLENLDILYFLLRVPHL-QILILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQLAWETELCWDVFEGLSHLQ 483 (844)
T ss_dssp EEECCSCCCCSSTTHHHHTTCTTC-CEEEEESCCCCCCCSSSSSCSCTTCCBCEEESCCCSSSCCSCCCSSCSSCBCCEE
T ss_pred eeecccCccccCchhhhhhcCCcc-ceeeCCCCcccccccccccccCCccccccCCCCccccccccccchhhhcCccccc
Confidence 2356667 6788888888865443 4566788999999999887 45557789999999
Q ss_pred hcccCccccccccCCCcCCCCCCCEEECCCCcCCCcCcccccCCccceEeCCCCcCcCcccccccccccccccccCCCCC
Q 039533 467 QLGMGGNLFQGPISSSLGSLRGLRVLDLSQNNLSGEIPKFLAGLSLNNLNLSYNDLEGMVTTEGVFKNASATRILGNSKL 546 (949)
Q Consensus 467 ~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~l~ls~N~l~~~~~~~~~~~~~~~~~~~gn~~~ 546 (949)
.|+|++|+|++.+|..|..+++|+.|+|++|+|++.+|..+. .+|+.|+|++|+|++.+|. .|..+..+.+.|||+.
T Consensus 484 ~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~-~~L~~L~Ls~N~l~~~~~~--~~~~L~~l~l~~Np~~ 560 (844)
T 3j0a_A 484 VLYLNHNYLNSLPPGVFSHLTALRGLSLNSNRLTVLSHNDLP-ANLEILDISRNQLLAPNPD--VFVSLSVLDITHNKFI 560 (844)
T ss_dssp CCCCCHHHHTTCCTTSSSSCCSCSEEEEESCCCSSCCCCCCC-SCCCEEEEEEECCCCCCSC--CCSSCCEEEEEEECCC
T ss_pred EEECCCCcccccChhHccchhhhheeECCCCCCCccChhhhh-ccccEEECCCCcCCCCChh--HhCCcCEEEecCCCcc
Confidence 999999999999999999999999999999999988887776 4699999999999999885 3668888999999999
Q ss_pred CC
Q 039533 547 CG 548 (949)
Q Consensus 547 c~ 548 (949)
|.
T Consensus 561 C~ 562 (844)
T 3j0a_A 561 CE 562 (844)
T ss_dssp CS
T ss_pred cc
Confidence 84
No 9
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=1.8e-51 Score=494.73 Aligned_cols=448 Identities=20% Similarity=0.218 Sum_probs=402.3
Q ss_pred CcEEEEEcCCCCCCccccCCCCCCCCCceeeccCceeccccCCcccCcccCcEEeeccccccCcCCCCCCCCccceeecC
Q 039533 65 QRVTLLDLRSLKLAGSVSHFIGNLSFLKQLYLQVNSFTHEIPSEIGGLRRLKVLALNNNSICGEIPTNISRCSTLIPIHP 144 (949)
Q Consensus 65 ~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l 144 (949)
.+++.|||++|++++..+.+|+++++|++|+|++|.+++..|..|+++++|++|+|++|.+++..|..|+++++|++|++
T Consensus 57 ~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~l~~~~~~~l~~L~~L~L 136 (606)
T 3t6q_A 57 INLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPLIFMAETALSGPKALKHLFFIQTGISSIDFIPLHNQKTLESLYL 136 (606)
T ss_dssp TTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCSEECTTTTSSCTTCCEEECTTSCCSCGGGSCCTTCTTCCEEEC
T ss_pred ccceEEECCCCccceeChhhccCccccCeeeCCCCcccccChhhhcccccccEeeccccCcccCCcchhccCCcccEEEC
Confidence 46889999999999988999999999999999999999999999999999999999999999777889999999999999
Q ss_pred CCccccccccccccCCCCCcEEECCCCCCCCCCCCCcCCCCCcc--EEeccccccCCCCCCcccCC--------------
Q 039533 145 QNNQLVGKILSRFSSLSKTEILNLGSNHLTGSIPSSLGNLSSIH--TISLAYNNLDGTIPNSFGWF-------------- 208 (949)
Q Consensus 145 ~~n~l~~~~~~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~--~L~L~~N~l~~~~p~~~~~l-------------- 208 (949)
++|++.+.....+..+++|++|+|++|.+++..|..|+.+++|+ +|++++|++++..|..|...
T Consensus 137 ~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~l~L~l~~n~l~~~~~~~~~~~~L~~L~l~~~~~~~ 216 (606)
T 3t6q_A 137 GSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLSKEDMSSLQQATNLSLNLNGNDIAGIEPGAFDSAVFQSLNFGGTQNLL 216 (606)
T ss_dssp CSSCCCCCCCCTTCCCTTCCEEECCSSCCCEECHHHHHTTTTCCSEEEECTTCCCCEECTTTTTTCEEEEEECTTCSCHH
T ss_pred CCCcccccCcccccCCcccCEEEcccCcccccChhhhhhhcccceeEEecCCCccCccChhHhhhccccccccCCchhHH
Confidence 99999987766666799999999999999988888899999999 99999999998888776542
Q ss_pred -------------------------------------CccccccccCcccccccccccCCCCChhhhccccccccccCCC
Q 039533 209 -------------------------------------ENLVFLSLAANNLSVVENKLTGEVPSLEKLQRLQHFTITSNSL 251 (949)
Q Consensus 209 -------------------------------------~~L~~L~Ls~N~l~~~~~~l~~~~~~l~~l~~L~~L~l~~N~l 251 (949)
.+|++|++++|.++.++.. .+..+++|++|++++|++
T Consensus 217 ~~~~~l~~~~l~~l~~~~~~~~~~~~i~~~~~~~l~~~~L~~L~l~~n~l~~~~~~------~~~~l~~L~~L~l~~n~l 290 (606)
T 3t6q_A 217 VIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGLCEMSVESINLQKHYFFNISSN------TFHCFSGLQELDLTATHL 290 (606)
T ss_dssp HHHHHTTTCEEEEEECCCCTTSCCCCCCGGGGGGGGGSEEEEEECTTCCCSSCCTT------TTTTCTTCSEEECTTSCC
T ss_pred HHhhhccccchhheechhhccccccccChhHhchhhcCceeEEEeecCccCccCHH------HhccccCCCEEeccCCcc
Confidence 0455555555555433321 277889999999999999
Q ss_pred CCCCCCCcchhccccccCcccEEEccCCCCCccCCchhhcccccccEEEccCccccCCCCCC-CCCCCcccEEEeeccee
Q 039533 252 GSGGNDDLSFLCSLTNATRLTWMHINSNNFGGLLPGCISNLSKTIKTLFLNNNKIYGSIPAG-IGNFVNLQRLDMWNNQL 330 (949)
Q Consensus 252 ~~~~~~~~~~~~~l~~~~~L~~L~L~~N~l~~~~p~~~~~l~~~L~~L~L~~N~l~~~~~~~-~~~l~~L~~L~L~~N~l 330 (949)
+.. +..+.++++|++|++++|.+++..|..+..++ +|++|++++|.+.+.+|.. +..+++|++|++++|.+
T Consensus 291 ~~l-------p~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~-~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l 362 (606)
T 3t6q_A 291 SEL-------PSGLVGLSTLKKLVLSANKFENLCQISASNFP-SLTHLSIKGNTKRLELGTGCLENLENLRELDLSHDDI 362 (606)
T ss_dssp SCC-------CSSCCSCTTCCEEECTTCCCSBGGGGCGGGCT-TCSEEECCSCSSCCBCCSSTTTTCTTCCEEECCSSCC
T ss_pred CCC-------ChhhcccccCCEEECccCCcCcCchhhhhccC-cCCEEECCCCCcccccchhhhhccCcCCEEECCCCcc
Confidence 854 33577889999999999999999888888885 6999999999999777654 89999999999999999
Q ss_pred cccC--CCcccccCCCCEEecCCcccccccCcccccccccceeecccccccccCCC-CCCCCCCCcEEEeeCccccCCCC
Q 039533 331 SGTI--PPAIGELQNLKILGLNRNKLSGNIPPSIGNLKMLLNLFLNDNFLEVSIPS-SLGQCESLIEINLSNNNLSGTIP 407 (949)
Q Consensus 331 ~~~~--p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~-~~~~l~~L~~L~l~~N~l~~~~p 407 (949)
++.. |..+.++++|++|+|++|++++..|..|.++++|+.|++++|.+++..|. .|..+++|++|++++|.+++..|
T Consensus 363 ~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~ 442 (606)
T 3t6q_A 363 ETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSE 442 (606)
T ss_dssp CEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEECTTCCEECCTTCCTTTTCTTCCEEECTTCCCBTTCT
T ss_pred ccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCeEECCCCcCCCcccchhhhCcccCCEEECCCCccCCcCH
Confidence 9776 88899999999999999999999999999999999999999999987765 49999999999999999999899
Q ss_pred CcccCCcccceeeccCCCccCCC---CccccccccccceeeeccccccccCCcccccccchhhcccCccccccccCCCcC
Q 039533 408 PQFFSLSSLSISLDWSRNKLTGS---LPIEVGKLKILEFLYVYENRLEGEIPSTFGNCIRLEQLGMGGNLFQGPISSSLG 484 (949)
Q Consensus 408 ~~~~~l~~l~~~L~ls~N~l~~~---~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~ 484 (949)
..+..+++| +.|++++|++++. .+..+..+++|++|++++|++++..|..|+.+++|+.|+|++|++++.+|..|.
T Consensus 443 ~~~~~l~~L-~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~ 521 (606)
T 3t6q_A 443 QLFDGLPAL-QHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRLTSSSIEALS 521 (606)
T ss_dssp TTTTTCTTC-CEEECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCGGGGGGGT
T ss_pred HHHhCCCCC-CEEECCCCCCCccccccchhhccCCCccEEECCCCccCccChhhhccccCCCEEECCCCccCcCChhHhC
Confidence 999999999 8999999999873 346799999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCEEECCCCcCCCcCcccccCCc-cceEeCCCCcCcCcccc
Q 039533 485 SLRGLRVLDLSQNNLSGEIPKFLAGLS-LNNLNLSYNDLEGMVTT 528 (949)
Q Consensus 485 ~l~~L~~L~Ls~N~l~~~~p~~~~~~~-L~~l~ls~N~l~~~~~~ 528 (949)
.+++| .|+|++|++++.+|..+..++ |+.|++++|++++..+.
T Consensus 522 ~l~~L-~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~~ 565 (606)
T 3t6q_A 522 HLKGI-YLNLASNHISIILPSLLPILSQQRTINLRQNPLDCTCSN 565 (606)
T ss_dssp TCCSC-EEECCSSCCCCCCGGGHHHHHTSSEEECTTCCEECSGGG
T ss_pred ccccc-EEECcCCcccccCHhhcccCCCCCEEeCCCCCccccCCc
Confidence 99999 999999999999998888776 99999999999987664
No 10
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=1.1e-51 Score=443.21 Aligned_cols=263 Identities=27% Similarity=0.407 Sum_probs=202.9
Q ss_pred cCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCC--cchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCccc
Q 039533 626 SGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHH--GASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFK 703 (949)
Q Consensus 626 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 703 (949)
+++.+.++||+|+||+||+|++. ..||||+++.... ...+.|.+|++++++++|||||++++++.. +..
T Consensus 36 ~~l~l~~~iG~G~fG~Vy~~~~~---~~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~------~~~ 106 (307)
T 3omv_A 36 SEVMLSTRIGSGSFGTVYKGKWH---GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK------DNL 106 (307)
T ss_dssp TSCCEEEECCCCSSSEEEEEESS---SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS------SSC
T ss_pred HHeEEeeEEeeCCCcEEEEEEEC---CcEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC------CeE
Confidence 56788899999999999999875 3599999875432 334689999999999999999999998743 257
Q ss_pred eeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEe
Q 039533 704 ASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVG 783 (949)
Q Consensus 704 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~ 783 (949)
++||||+++|+|.++++. ....+++.++..|+.|||+||+|||++ +||||||||+|||+++++++||+
T Consensus 107 ~iVmEy~~gGsL~~~l~~---------~~~~l~~~~~~~i~~qia~gL~yLH~~---~IiHRDlKp~NILl~~~~~~Ki~ 174 (307)
T 3omv_A 107 AIVTQWCEGSSLYKHLHV---------QETKFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIG 174 (307)
T ss_dssp EEEEECCSSCBHHHHHHT---------SCCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCCSSSEEEETTEEEEEC
T ss_pred EEEEEcCCCCCHHHHHhh---------cCCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCccCHHHEEECCCCcEEEe
Confidence 999999999999999962 234699999999999999999999987 89999999999999999999999
Q ss_pred ecccceecCCCCCccccccccCccCccCccccCC---CccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhcccc
Q 039533 784 DFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVG---CEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKA 860 (949)
Q Consensus 784 DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~ 860 (949)
|||+|+...............||+.|||||++.+ ..|+.++|||||||++|||+||+.||........ ........
T Consensus 175 DFGla~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~~-~~~~~~~~ 253 (307)
T 3omv_A 175 DFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQ-IIFMVGRG 253 (307)
T ss_dssp CCSSCBC------------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHH-HHHHHHTT
T ss_pred eccCceecccCCcceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHHH-HHHHHhcC
Confidence 9999987654433333335679999999999864 3589999999999999999999999964321111 11111000
Q ss_pred CCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHHhHHhhc
Q 039533 861 LPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHELQSIKNILL 936 (949)
Q Consensus 861 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~~~~~ 936 (949)
. ..+.+... ..+++..+.+++.+||+.||++||||+||++.|+.++..+.
T Consensus 254 ~-------~~p~~~~~-------------------~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l~~~lp 303 (307)
T 3omv_A 254 Y-------ASPDLSKL-------------------YKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSLP 303 (307)
T ss_dssp C-------CCCCSTTS-------------------CTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHHHHHTTCC
T ss_pred C-------CCCCcccc-------------------cccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhccCC
Confidence 0 00000000 11345678899999999999999999999999999887654
No 11
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=2e-50 Score=485.60 Aligned_cols=447 Identities=21% Similarity=0.197 Sum_probs=402.4
Q ss_pred CcEEEEEcCCCCCCccccCCCCCCCCCceeeccCceeccccCCcccCcccCcEEeeccccccCcCCCCCCCCccceeecC
Q 039533 65 QRVTLLDLRSLKLAGSVSHFIGNLSFLKQLYLQVNSFTHEIPSEIGGLRRLKVLALNNNSICGEIPTNISRCSTLIPIHP 144 (949)
Q Consensus 65 ~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l 144 (949)
.+++.|||++|.+++..+.+|+++++|++|+|++|.+++..|..|+++++|++|+|++|.+++..|..|+++++|++|++
T Consensus 56 ~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 135 (606)
T 3vq2_A 56 SELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKLNV 135 (606)
T ss_dssp TTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCCCCTTSSTTCTTCCEEECTTSCCCCSSSSCCTTCTTCCEEEC
T ss_pred ccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcccccChhhcCCcccCCEEEccCCccccccccccCCCCCCCEEeC
Confidence 47899999999999888899999999999999999999888999999999999999999999777789999999999999
Q ss_pred CCccccc-cccccccCCCCCcEEECCCCCCCCCCCCCcCCCCCcc----EEeccccccCCCCCCcccCCCccccccccCc
Q 039533 145 QNNQLVG-KILSRFSSLSKTEILNLGSNHLTGSIPSSLGNLSSIH----TISLAYNNLDGTIPNSFGWFENLVFLSLAAN 219 (949)
Q Consensus 145 ~~n~l~~-~~~~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~----~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N 219 (949)
++|++.+ .+|..|.++++|++|+|++|++++..|..|+.+++|+ +|++++|++++..+..+... +|++|++++|
T Consensus 136 ~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~~l~~L~l~~n~l~~~~~~~~~~~-~L~~L~L~~n 214 (606)
T 3vq2_A 136 AHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVNDLQFLRENPQVNLSLDMSLNPIDFIQDQAFQGI-KLHELTLRGN 214 (606)
T ss_dssp CSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEECTTTTHHHHHCTTCCCEEECTTCCCCEECTTTTTTC-EEEEEEEESC
T ss_pred CCCcccceechHhHhhcCCCCEEEccCCcceecChhhhhhhhccccccceeeccCCCcceeCcccccCc-eeeeeeccCC
Confidence 9999987 5699999999999999999999998888888887765 89999999997777666655 8999999999
Q ss_pred cccc---------------------------------------------------ccccccCCCCChhhhcccccccccc
Q 039533 220 NLSV---------------------------------------------------VENKLTGEVPSLEKLQRLQHFTITS 248 (949)
Q Consensus 220 ~l~~---------------------------------------------------~~~~l~~~~~~l~~l~~L~~L~l~~ 248 (949)
.++. ..+.+.+.+|.+..+++|++|++++
T Consensus 215 ~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~~~~~~~~~~~~~~~l~~L~~L~l~~ 294 (606)
T 3vq2_A 215 FNSSNIMKTCLQNLAGLHVHRLILGEFKDERNLEIFEPSIMEGLCDVTIDEFRLTYTNDFSDDIVKFHCLANVSAMSLAG 294 (606)
T ss_dssp CSCHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCGGGGTTGGGSEEEEEEECCCTTCCGGGGSCGGGTTCSEEEEES
T ss_pred ccchhHHHHHhccccccccccccccccccCCcccccChHHhhhhhhccHhheeccccccccccccccccCCCCCEEEecC
Confidence 8641 2345566777788999999999999
Q ss_pred CCCCCCCCCCcchhccccccCcccEEEccCCCCCccCCchhhcccccccEEEccCccccCCCCCCCCCCCcccEEEeecc
Q 039533 249 NSLGSGGNDDLSFLCSLTNATRLTWMHINSNNFGGLLPGCISNLSKTIKTLFLNNNKIYGSIPAGIGNFVNLQRLDMWNN 328 (949)
Q Consensus 249 N~l~~~~~~~~~~~~~l~~~~~L~~L~L~~N~l~~~~p~~~~~l~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N 328 (949)
|.+...+ .+..+++|++|++++|.+ +.+|. + .+ ++|++|++++|+..+.+ .+..+++|++|++++|
T Consensus 295 ~~~~~l~--------~l~~~~~L~~L~l~~n~l-~~lp~-~-~l-~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n 360 (606)
T 3vq2_A 295 VSIKYLE--------DVPKHFKWQSLSIIRCQL-KQFPT-L-DL-PFLKSLTLTMNKGSISF--KKVALPSLSYLDLSRN 360 (606)
T ss_dssp CCCCCCC--------CCCTTCCCSEEEEESCCC-SSCCC-C-CC-SSCCEEEEESCSSCEEC--CCCCCTTCCEEECCSS
T ss_pred ccchhhh--------hccccccCCEEEcccccC-ccccc-C-CC-CccceeeccCCcCccch--hhccCCCCCEEECcCC
Confidence 9987543 567788999999999999 67774 4 55 57999999999765444 6789999999999999
Q ss_pred eeccc--CCCcccccCCCCEEecCCcccccccCcccccccccceeecccccccccCC-CCCCCCCCCcEEEeeCccccCC
Q 039533 329 QLSGT--IPPAIGELQNLKILGLNRNKLSGNIPPSIGNLKMLLNLFLNDNFLEVSIP-SSLGQCESLIEINLSNNNLSGT 405 (949)
Q Consensus 329 ~l~~~--~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~l~~N~l~~~ 405 (949)
.+++. +|..+..+++|+.|+|++|++++ +|..+.++++|+.|++++|.+.+..| ..|..+++|++|++++|++++.
T Consensus 361 ~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~ 439 (606)
T 3vq2_A 361 ALSFSGCCSYSDLGTNSLRHLDLSFNGAII-MSANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKID 439 (606)
T ss_dssp CEEEEEECCHHHHCCSCCCEEECCSCSEEE-ECCCCTTCTTCCEEECTTSEEESTTTTTTTTTCTTCCEEECTTSCCEEC
T ss_pred ccCCCcchhhhhccCCcccEeECCCCcccc-chhhccCCCCCCeeECCCCccCCccChhhhhccccCCEEECcCCCCCcc
Confidence 99976 48889999999999999999995 67889999999999999999998888 7899999999999999999999
Q ss_pred CCCcccCCcccceeeccCCCccCC-CCccccccccccceeeeccccccccCCcccccccchhhcccCccccccccCCCcC
Q 039533 406 IPPQFFSLSSLSISLDWSRNKLTG-SLPIEVGKLKILEFLYVYENRLEGEIPSTFGNCIRLEQLGMGGNLFQGPISSSLG 484 (949)
Q Consensus 406 ~p~~~~~l~~l~~~L~ls~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~ 484 (949)
.|..+..+++| +.|++++|++++ .+|..++.+++|++|+|++|++++..|..|+++++|+.|+|++|++++.+|..|+
T Consensus 440 ~~~~~~~l~~L-~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 518 (606)
T 3vq2_A 440 FDGIFLGLTSL-NTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYN 518 (606)
T ss_dssp CTTTTTTCTTC-CEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCEEGGGTT
T ss_pred chhhhcCCCCC-CEEECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhhcccccCCEEECCCCcCCCcCHHHcc
Confidence 99999999999 899999999998 4799999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCEEECCCCcCCCcCcccccCCc--cceEeCCCCcCcCccccc
Q 039533 485 SLRGLRVLDLSQNNLSGEIPKFLAGLS--LNNLNLSYNDLEGMVTTE 529 (949)
Q Consensus 485 ~l~~L~~L~Ls~N~l~~~~p~~~~~~~--L~~l~ls~N~l~~~~~~~ 529 (949)
.+++|+.|||++|+|+ .+|..+..+. |++|++++|++.+..+..
T Consensus 519 ~l~~L~~L~l~~N~l~-~~p~~~~~l~~~L~~l~l~~N~~~c~c~~~ 564 (606)
T 3vq2_A 519 QLYSLSTLDCSFNRIE-TSKGILQHFPKSLAFFNLTNNSVACICEHQ 564 (606)
T ss_dssp TCTTCCEEECTTSCCC-CEESCGGGSCTTCCEEECCSCCCCCSSTTH
T ss_pred CCCcCCEEECCCCcCc-ccCHhHhhhcccCcEEEccCCCcccCCccH
Confidence 9999999999999999 5666677663 999999999999876643
No 12
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=1.6e-51 Score=448.67 Aligned_cols=269 Identities=24% Similarity=0.375 Sum_probs=206.0
Q ss_pred cCCCCCCeeeeecCceEEEEEEc-----CCCEEEEEEEEecCCCcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCC
Q 039533 626 SGFSSANLVGVGSFGSVYKGIID-----EGRTTIAVKVFNLQHHGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGN 700 (949)
Q Consensus 626 ~~y~~~~~lg~G~~g~Vy~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 700 (949)
++|.+.++||+|+||+||+|++. .+++.||||+++.......++|.+|++++++++|||||+++|+|.+.+
T Consensus 41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~---- 116 (329)
T 4aoj_A 41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGR---- 116 (329)
T ss_dssp GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSS----
T ss_pred HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECC----
Confidence 45667789999999999999875 357899999998666556678999999999999999999999987554
Q ss_pred ccceeEeeeccCCChhhhcCCCCCCCc-----cccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeec
Q 039533 701 DFKASVYEFMHYGSLEEWLHPFTGEDE-----IDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLD 775 (949)
Q Consensus 701 ~~~~lv~e~~~~gsL~~~l~~~~~~~~-----~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~ 775 (949)
..++||||+++|+|.++++....... .......+++.+++.|+.|||+||+|||++ +||||||||+|||++
T Consensus 117 -~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLKp~NILl~ 192 (329)
T 4aoj_A 117 -PLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGL---HFVHRDLATRNCLVG 192 (329)
T ss_dssp -SEEEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEE
T ss_pred -EEEEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecccccHhhEEEC
Confidence 78999999999999999975432211 112345799999999999999999999987 899999999999999
Q ss_pred CCCceEEeecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHh-CCCCCccccccCchhh
Q 039533 776 DYMTARVGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVI-GKKPIDIMFEGDINLH 854 (949)
Q Consensus 776 ~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~ellt-g~~Pf~~~~~~~~~~~ 854 (949)
+++.+||+|||+|+...............||+.|||||++.+..++.++|||||||++|||+| |+.||......+ ..
T Consensus 193 ~~~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~~--~~ 270 (329)
T 4aoj_A 193 QGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTE--AI 270 (329)
T ss_dssp TTTEEEECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCHHH--HH
T ss_pred CCCcEEEcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCHHH--HH
Confidence 999999999999997755444333335669999999999999999999999999999999999 899996432111 11
Q ss_pred hhccccCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHHhHHh
Q 039533 855 NFGRKALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHELQSIKNI 934 (949)
Q Consensus 855 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~~~ 934 (949)
.. +.+..-.+ .+..+++.+.+++.+||+.||++||||+||++.|+.+.+.
T Consensus 271 ~~-----------i~~g~~~~-------------------~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~~~ 320 (329)
T 4aoj_A 271 DC-----------ITQGRELE-------------------RPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQA 320 (329)
T ss_dssp HH-----------HHHTCCCC-------------------CCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHHHS
T ss_pred HH-----------HHcCCCCC-------------------CcccccHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHhhC
Confidence 00 00000000 0113456789999999999999999999999999998764
No 13
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=5.2e-52 Score=446.11 Aligned_cols=269 Identities=24% Similarity=0.390 Sum_probs=213.1
Q ss_pred cCCCCCCeeeeecCceEEEEEEc-----CCCEEEEEEEEecCCCcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCC
Q 039533 626 SGFSSANLVGVGSFGSVYKGIID-----EGRTTIAVKVFNLQHHGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGN 700 (949)
Q Consensus 626 ~~y~~~~~lg~G~~g~Vy~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 700 (949)
++|.+.+.||+|+||+||+|++. .+++.||||+++.......++|.+|++++++++|||||+++|+|.+.+
T Consensus 13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~---- 88 (299)
T 4asz_A 13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGD---- 88 (299)
T ss_dssp GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSS----
T ss_pred HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCC----
Confidence 46778899999999999999874 357899999998666556678999999999999999999999987554
Q ss_pred ccceeEeeeccCCChhhhcCCCCCC---CccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCC
Q 039533 701 DFKASVYEFMHYGSLEEWLHPFTGE---DEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDY 777 (949)
Q Consensus 701 ~~~~lv~e~~~~gsL~~~l~~~~~~---~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~ 777 (949)
..++||||+++|+|.++++..... .........+++.+++.|+.|||+||+|||++ +|+||||||+|||++++
T Consensus 89 -~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDlKp~NILl~~~ 164 (299)
T 4asz_A 89 -PLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLATRNCLVGEN 164 (299)
T ss_dssp -SEEEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGG
T ss_pred -EEEEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCccCHhhEEECCC
Confidence 789999999999999999732100 00012345799999999999999999999987 89999999999999999
Q ss_pred CceEEeecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHh-CCCCCccccccCchhhhh
Q 039533 778 MTARVGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVI-GKKPIDIMFEGDINLHNF 856 (949)
Q Consensus 778 ~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~ellt-g~~Pf~~~~~~~~~~~~~ 856 (949)
+.+||+|||+|+...............||+.|||||++.+..++.++|||||||++|||+| |+.||......+ ...
T Consensus 165 ~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~~--~~~- 241 (299)
T 4asz_A 165 LLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNE--VIE- 241 (299)
T ss_dssp GCEEECCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHH--HHH-
T ss_pred CcEEECCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHH--HHH-
Confidence 9999999999987655444333334568999999999999999999999999999999999 899996432111 110
Q ss_pred ccccCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHHhHHh
Q 039533 857 GRKALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHELQSIKNI 934 (949)
Q Consensus 857 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~~~ 934 (949)
.+.+....+.+ ..++.++.+++.+||+.||++||||+||.+.|+++.+.
T Consensus 242 ----------~i~~~~~~~~p-------------------~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~~~ 290 (299)
T 4asz_A 242 ----------CITQGRVLQRP-------------------RTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLAKA 290 (299)
T ss_dssp ----------HHHHTCCCCCC-------------------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred ----------HHHcCCCCCCC-------------------ccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhc
Confidence 01110100111 13456789999999999999999999999999998765
No 14
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=3.7e-49 Score=481.07 Aligned_cols=469 Identities=19% Similarity=0.172 Sum_probs=362.0
Q ss_pred EEEEcCCCCCCccccCCCCCCCCCceeeccCceeccccCCcccCcccCcEEeeccccccCcCCCCCCCCccceeecCCCc
Q 039533 68 TLLDLRSLKLAGSVSHFIGNLSFLKQLYLQVNSFTHEIPSEIGGLRRLKVLALNNNSICGEIPTNISRCSTLIPIHPQNN 147 (949)
Q Consensus 68 ~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n 147 (949)
..+|.++++++ .+|..+. +++++|+|++|++++..+..|+++++|++|+|++|.+++..|..|+++++|++|++++|
T Consensus 7 ~~~~cs~~~L~-~ip~~~~--~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n 83 (680)
T 1ziw_A 7 EVADCSHLKLT-QVPDDLP--TNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHN 83 (680)
T ss_dssp SEEECCSSCCS-SCCSCSC--TTCSEEECCSSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSS
T ss_pred CeeECCCCCcc-ccccccC--CCCcEEECCCCCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCC
Confidence 35899999997 5777665 79999999999999877788999999999999999999989999999999999999999
Q ss_pred cccccccccccCCCCCcEEECCCCCCCCCCCCCcCCCCCccEEeccccccCCCCCCcccCCCccccccccCccccccccc
Q 039533 148 QLVGKILSRFSSLSKTEILNLGSNHLTGSIPSSLGNLSSIHTISLAYNNLDGTIPNSFGWFENLVFLSLAANNLSVVENK 227 (949)
Q Consensus 148 ~l~~~~~~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~ 227 (949)
.+++..+..|.++++|++|+|++|++++..|..|+++++|++|+|++|++++..|..|+++++|++|+|++|.++.+...
T Consensus 84 ~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~ 163 (680)
T 1ziw_A 84 ELSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSE 163 (680)
T ss_dssp CCCCCCTTTTTTCTTCSEEECCSSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSCCCCBCHH
T ss_pred ccCccChhhhccCCCCCEEECCCCccCccChhHccccCCCCEEECCCCcccccCchhhcccccCCEEEccCCcccccCHH
Confidence 99998888999999999999999999988888999999999999999999999999999999999999999988755422
Q ss_pred ccCCCCChhhhccccccccccCCCCCCCCCCcchhcccc---------------------ccCcccEEEccCCCCCccCC
Q 039533 228 LTGEVPSLEKLQRLQHFTITSNSLGSGGNDDLSFLCSLT---------------------NATRLTWMHINSNNFGGLLP 286 (949)
Q Consensus 228 l~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~---------------------~~~~L~~L~L~~N~l~~~~p 286 (949)
.. ....+++|++|++++|+++...+..+.....+. ..++|+.|++++|.+++..|
T Consensus 164 ~~----~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~~ 239 (680)
T 1ziw_A 164 EL----DIFANSSLKKLELSSNQIKEFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSN 239 (680)
T ss_dssp HH----GGGTTCEESEEECTTCCCCCBCTTGGGGSSEECEEECTTCCCHHHHHHHHHHHHTTSCCCEEECTTSCCCEECT
T ss_pred Hh----hccccccccEEECCCCcccccChhhhhhhhhhhhhhccccccChhhHHHHHHHhhhccccEEEccCCcccccCh
Confidence 11 122457899999999999876655443322221 22678999999999999999
Q ss_pred chhhccc-ccccEEEccCccccCCCCCCCCCCCcccEEEeecceecccCCCcccccCCCCEEecCCccccc-----ccCc
Q 039533 287 GCISNLS-KTIKTLFLNNNKIYGSIPAGIGNFVNLQRLDMWNNQLSGTIPPAIGELQNLKILGLNRNKLSG-----NIPP 360 (949)
Q Consensus 287 ~~~~~l~-~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~-----~~p~ 360 (949)
..+..+. .+|++|+|++|++++..|..|+.+++|++|+|++|++++..|..|.++++|+.|+|++|...+ .+|.
T Consensus 240 ~~~~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~~~~~~~~~~~~lp~ 319 (680)
T 1ziw_A 240 TTFLGLKWTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPK 319 (680)
T ss_dssp TTTGGGGGSCCCEEECTTSCCCEECTTTTTTCTTCCEEECCSCCBSEECTTTTTTCTTCCEEECTTCBCCC------CCE
T ss_pred hHhhccCcCCCCEEECCCCCcCccCcccccCcccccEeeCCCCccCccChhhhcCCCCccEEeccchhhhcccccccccc
Confidence 8888775 359999999999998888999999999999999999999889899999999999998876553 2332
Q ss_pred ----ccccccccceeecccccccccCCCCCCCCCCCcEEEeeCccccCC-CCC-cccCC--cccceeeccCCCccCCCCc
Q 039533 361 ----SIGNLKMLLNLFLNDNFLEVSIPSSLGQCESLIEINLSNNNLSGT-IPP-QFFSL--SSLSISLDWSRNKLTGSLP 432 (949)
Q Consensus 361 ----~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~-~p~-~~~~l--~~l~~~L~ls~N~l~~~~p 432 (949)
.|..+++|++|++++|.+++..|..|.++++|++|++++|.+++. ++. .|..+ +++ +.|++++|++++..|
T Consensus 320 i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~~~~~~l~~~~f~~~~~~~L-~~L~L~~n~l~~~~~ 398 (680)
T 1ziw_A 320 IDDFSFQWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPL-HILNLTKNKISKIES 398 (680)
T ss_dssp ECTTTTTTCTTCCEEECCSCCBCCCCTTTTTTCTTCCEEECTTCBSCCCEECTTTTGGGTTSCC-CEEECTTSCCCEECT
T ss_pred cChhhcccCCCCCEEECCCCccCCCChhHhccccCCcEEECCCCchhhhhcchhhhcccccCcC-ceEECCCCCCCeECh
Confidence 678888899999999998888888888888888888887765322 121 22222 344 566777777776666
Q ss_pred cccccccccceeeeccccccccCC-cccccccchhhcccCccccccccCCCcCCCCCCCEEECCCCcCC--CcCcccccC
Q 039533 433 IEVGKLKILEFLYVYENRLEGEIP-STFGNCIRLEQLGMGGNLFQGPISSSLGSLRGLRVLDLSQNNLS--GEIPKFLAG 509 (949)
Q Consensus 433 ~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~--~~~p~~~~~ 509 (949)
..+..+++|+.|+|++|++++.+| ..|.++++|+.|++++|++++..+..|..+++|+.|++++|.++ +.+|..+..
T Consensus 399 ~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~p~~~~~ 478 (680)
T 1ziw_A 399 DAFSWLGHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQP 478 (680)
T ss_dssp TTTTTCTTCCEEECCSSCCEEECCSGGGTTCTTCCEEECCSCSEEECCTTTTTTCTTCCEEECTTSCCBCTTCSSCTTTT
T ss_pred hhhhCCCCCCEEeCCCCcCccccCcccccCcccccEEecCCCCcceeChhhhhcCcccccchhccccccccccCCccccc
Confidence 666677777777777777665554 46666667777777777666666666666666666666666655 345555555
Q ss_pred Cc-cceEeCCCCcCcCcccc-cccccccccccccCCC
Q 039533 510 LS-LNNLNLSYNDLEGMVTT-EGVFKNASATRILGNS 544 (949)
Q Consensus 510 ~~-L~~l~ls~N~l~~~~~~-~~~~~~~~~~~~~gn~ 544 (949)
++ |+.|++++|.+++.++. ...+..+..+.+.+|.
T Consensus 479 l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~Ls~N~ 515 (680)
T 1ziw_A 479 LRNLTILDLSNNNIANINDDMLEGLEKLEILDLQHNN 515 (680)
T ss_dssp CTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred CCCCCEEECCCCCCCcCChhhhccccccCEEeCCCCC
Confidence 54 66666666666655443 2334444555555553
No 15
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=6.2e-51 Score=439.65 Aligned_cols=265 Identities=21% Similarity=0.311 Sum_probs=208.4
Q ss_pred CCCCCCeeeeecCceEEEEEEc-----CCCEEEEEEEEecCCC-cchHHHHHHHHHHHhcCCCcceeEEeeeecccccCC
Q 039533 627 GFSSANLVGVGSFGSVYKGIID-----EGRTTIAVKVFNLQHH-GASRSFIAECKALKSIRHRNLVKVLTACLGADYRGN 700 (949)
Q Consensus 627 ~y~~~~~lg~G~~g~Vy~~~~~-----~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 700 (949)
++++.+.||+|+||+||+|++. .+++.||||+++.... ...++|.+|+.++++++|||||+++|+|...+
T Consensus 27 ~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~---- 102 (308)
T 4gt4_A 27 AVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQ---- 102 (308)
T ss_dssp GEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSS----
T ss_pred HCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECC----
Confidence 4566789999999999999974 3568999999975433 33578999999999999999999999987554
Q ss_pred ccceeEeeeccCCChhhhcCCCCCCCc------cccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeee
Q 039533 701 DFKASVYEFMHYGSLEEWLHPFTGEDE------IDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLL 774 (949)
Q Consensus 701 ~~~~lv~e~~~~gsL~~~l~~~~~~~~------~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll 774 (949)
..++||||+++|+|.+++........ .......+++.+++.|+.|||+||+|||++ +||||||||+|||+
T Consensus 103 -~~~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLK~~NILl 178 (308)
T 4gt4_A 103 -PLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSH---HVVHKDLATRNVLV 178 (308)
T ss_dssp -SCEEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEE
T ss_pred -EEEEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCccccceEE
Confidence 78999999999999999964321110 011235699999999999999999999987 89999999999999
Q ss_pred cCCCceEEeecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHh-CCCCCccccccCchh
Q 039533 775 DDYMTARVGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVI-GKKPIDIMFEGDINL 853 (949)
Q Consensus 775 ~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~ellt-g~~Pf~~~~~~~~~~ 853 (949)
++++++||+|||+|+...............||+.|||||++.+..++.++|||||||++|||+| |+.||...... .+
T Consensus 179 ~~~~~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~~--~~ 256 (308)
T 4gt4_A 179 YDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQ--DV 256 (308)
T ss_dssp CGGGCEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCHH--HH
T ss_pred CCCCCEEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCHH--HH
Confidence 9999999999999987654433333334569999999999999999999999999999999999 89999643221 11
Q ss_pred hhhccccCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHHh
Q 039533 854 HNFGRKALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHELQSI 931 (949)
Q Consensus 854 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i 931 (949)
...+ .+....+.+ .+++..+.+++.+||+.||++||||+||++.|+++
T Consensus 257 ~~~i-----------~~~~~~~~p-------------------~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a~ 304 (308)
T 4gt4_A 257 VEMI-----------RNRQVLPCP-------------------DDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRAW 304 (308)
T ss_dssp HHHH-----------HTTCCCCCC-------------------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTS
T ss_pred HHHH-----------HcCCCCCCc-------------------ccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHhc
Confidence 1111 111111111 24566789999999999999999999999999865
No 16
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00 E-value=3.1e-49 Score=471.84 Aligned_cols=449 Identities=20% Similarity=0.191 Sum_probs=382.7
Q ss_pred CcEEEEEcCCCCCCccccCCCCCCCCCceeeccCceeccccCCcccCcccCcEEeeccccccCcCCCCCCCCccceeecC
Q 039533 65 QRVTLLDLRSLKLAGSVSHFIGNLSFLKQLYLQVNSFTHEIPSEIGGLRRLKVLALNNNSICGEIPTNISRCSTLIPIHP 144 (949)
Q Consensus 65 ~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l 144 (949)
.+++.|||++|++++..+.+|.++++|++|+|++|++++..|..|+++++|++|+|++|.+++..|..|+++++|++|++
T Consensus 28 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 107 (570)
T 2z63_A 28 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 107 (570)
T ss_dssp SSCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEEC
T ss_pred ccccEEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHhhhcCccccccccc
Confidence 46889999999999888889999999999999999999888889999999999999999999888899999999999999
Q ss_pred CCccccccccccccCCCCCcEEECCCCCCCC-CCCCCcCCCCCccEEeccccccCCCCCCcccCCCcc----ccccccCc
Q 039533 145 QNNQLVGKILSRFSSLSKTEILNLGSNHLTG-SIPSSLGNLSSIHTISLAYNNLDGTIPNSFGWFENL----VFLSLAAN 219 (949)
Q Consensus 145 ~~n~l~~~~~~~~~~L~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L----~~L~Ls~N 219 (949)
++|++++..+..|+++++|++|+|++|.+++ .+|..|+++++|++|++++|++++..|..|+.+++| +.|++++|
T Consensus 108 ~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~~~~~L~l~~n 187 (570)
T 2z63_A 108 VETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLN 187 (570)
T ss_dssp TTSCCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEECGGGGHHHHTCTTCCCEEECTTC
T ss_pred cccccccCCCccccccccccEEecCCCccceecChhhhcccCCCCEEeCcCCccceecHHHccchhccchhhhhcccCCC
Confidence 9999998888789999999999999999997 479999999999999999999998888899999888 88999999
Q ss_pred ccccccccccCCCCChhhhccccccccccCCCCCC-------------------------------CCCCc---------
Q 039533 220 NLSVVENKLTGEVPSLEKLQRLQHFTITSNSLGSG-------------------------------GNDDL--------- 259 (949)
Q Consensus 220 ~l~~~~~~l~~~~~~l~~l~~L~~L~l~~N~l~~~-------------------------------~~~~~--------- 259 (949)
.++.++... +.. .+|++|++++|..... ....+
T Consensus 188 ~l~~~~~~~------~~~-~~L~~L~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~ 260 (570)
T 2z63_A 188 PMNFIQPGA------FKE-IRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIE 260 (570)
T ss_dssp CCCEECTTT------TTT-CEEEEEEEESCCSCTTHHHHHHHTTTTCEEEEEEEEECCCCSSCEECCTTTTGGGGGSEEE
T ss_pred CceecCHHH------hcc-CcceeEecccccccccchhhhhcCccccceeeeccccccCchhhhhcchhhhccccccchh
Confidence 988765432 222 2577777776632110 00000
Q ss_pred ------------chhccccccCcccEEEccCCCCCccCCchhhcccccccEEEccCccccCCCCCCCCCCCcccEEEeec
Q 039533 260 ------------SFLCSLTNATRLTWMHINSNNFGGLLPGCISNLSKTIKTLFLNNNKIYGSIPAGIGNFVNLQRLDMWN 327 (949)
Q Consensus 260 ------------~~~~~l~~~~~L~~L~L~~N~l~~~~p~~~~~l~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~ 327 (949)
..+..+..+++|+.|++++|.++ .+|..+..+ +|++|++++|.+. .+|. ..+++|++|++++
T Consensus 261 ~l~l~~~~~~~~~~~~~~~~l~~L~~L~l~~~~l~-~l~~~~~~~--~L~~L~l~~n~~~-~l~~--~~l~~L~~L~l~~ 334 (570)
T 2z63_A 261 EFRLAYLDYYLDDIIDLFNCLTNVSSFSLVSVTIE-RVKDFSYNF--GWQHLELVNCKFG-QFPT--LKLKSLKRLTFTS 334 (570)
T ss_dssp EEEEEETTEEESCSTTTTGGGTTCSEEEEESCEEC-SCCBCCSCC--CCSEEEEESCBCS-SCCB--CBCSSCCEEEEES
T ss_pred hhhhhcchhhhhhchhhhcCcCcccEEEecCccch-hhhhhhccC--CccEEeeccCccc-ccCc--ccccccCEEeCcC
Confidence 01233556788889999999888 477777766 6899999999988 5554 4778899999999
Q ss_pred ceecccCCCcccccCCCCEEecCCccccccc--CcccccccccceeecccccccccCCCCCCCCCCCcEEEeeCccccCC
Q 039533 328 NQLSGTIPPAIGELQNLKILGLNRNKLSGNI--PPSIGNLKMLLNLFLNDNFLEVSIPSSLGQCESLIEINLSNNNLSGT 405 (949)
Q Consensus 328 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~--p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~ 405 (949)
|.+.+..+. ..+++|+.|+|++|++++.. |..+.++++|++|++++|.+++..+. +..+++|++|++++|++++.
T Consensus 335 n~~~~~~~~--~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~-~~~l~~L~~L~l~~n~l~~~ 411 (570)
T 2z63_A 335 NKGGNAFSE--VDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSSN-FLGLEQLEHLDFQHSNLKQM 411 (570)
T ss_dssp CBSCCBCCC--CBCTTCCEEECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEEEEEEE-EETCTTCCEEECTTSEEESC
T ss_pred Ccccccccc--ccCCCCCEEeCcCCccCccccccccccccCccCEEECCCCcccccccc-ccccCCCCEEEccCCccccc
Confidence 998866665 78899999999999998654 77889999999999999999876555 88999999999999999977
Q ss_pred CC-CcccCCcccceeeccCCCccCCCCccccccccccceeeecccccc-ccCCcccccccchhhcccCccccccccCCCc
Q 039533 406 IP-PQFFSLSSLSISLDWSRNKLTGSLPIEVGKLKILEFLYVYENRLE-GEIPSTFGNCIRLEQLGMGGNLFQGPISSSL 483 (949)
Q Consensus 406 ~p-~~~~~l~~l~~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~ 483 (949)
.| ..+..+++| +.|++++|.+++..|..+.++++|++|++++|+++ +.+|..|+.+++|+.|+|++|++++..|..|
T Consensus 412 ~~~~~~~~l~~L-~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~ 490 (570)
T 2z63_A 412 SEFSVFLSLRNL-IYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAF 490 (570)
T ss_dssp TTSCTTTTCTTC-CEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTT
T ss_pred cchhhhhcCCCC-CEEeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEEECCCCccccCChhhh
Confidence 66 467788888 78999999999989999999999999999999998 6789999999999999999999999889999
Q ss_pred CCCCCCCEEECCCCcCCCcCcccccCCc-cceEeCCCCcCcCcccccc
Q 039533 484 GSLRGLRVLDLSQNNLSGEIPKFLAGLS-LNNLNLSYNDLEGMVTTEG 530 (949)
Q Consensus 484 ~~l~~L~~L~Ls~N~l~~~~p~~~~~~~-L~~l~ls~N~l~~~~~~~~ 530 (949)
+.+++|+.|+|++|++++.+|..+..++ |+.|++++|++++.+|...
T Consensus 491 ~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~~~ 538 (570)
T 2z63_A 491 NSLSSLQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRID 538 (570)
T ss_dssp TTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTTTH
T ss_pred hcccCCCEEeCCCCcCCCCCHHHhhcccCCcEEEecCCcccCCCcchH
Confidence 9999999999999999988888887776 9999999999999887643
No 17
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=2.6e-50 Score=437.56 Aligned_cols=250 Identities=22% Similarity=0.293 Sum_probs=207.2
Q ss_pred cCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCCcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCcccee
Q 039533 626 SGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFKAS 705 (949)
Q Consensus 626 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 705 (949)
+.|++.++||+|+||+||+|++..+|+.||||+++.......+.+.+|++++++++|||||++++++.+.+ ..|+
T Consensus 74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~-----~~~i 148 (346)
T 4fih_A 74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGD-----ELWV 148 (346)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETT-----EEEE
T ss_pred HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECC-----EEEE
Confidence 46888999999999999999999999999999998666666677899999999999999999999976554 7999
Q ss_pred EeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEeec
Q 039533 706 VYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVGDF 785 (949)
Q Consensus 706 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~Df 785 (949)
||||+++|+|.+++. ...+++.++..|+.||+.||+|||++ +||||||||+|||++.++++||+||
T Consensus 149 vmEy~~gg~L~~~l~-----------~~~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DF 214 (346)
T 4fih_A 149 VMEFLEGGALTDIVT-----------HTRMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDF 214 (346)
T ss_dssp EECCCTTEEHHHHHH-----------HSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCC
T ss_pred EEeCCCCCcHHHHHH-----------cCCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEECCCCCEEEecC
Confidence 999999999999986 23589999999999999999999988 9999999999999999999999999
Q ss_pred ccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhccccCCCch
Q 039533 786 GLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKALPDDV 865 (949)
Q Consensus 786 G~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~ 865 (949)
|+|+.+....... ....||+.|||||++.+..|+.++||||+||++|||++|+.||...... ..........+.
T Consensus 215 Gla~~~~~~~~~~--~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~--~~~~~i~~~~~~-- 288 (346)
T 4fih_A 215 GFCAQVSKEVPRR--KSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPL--KAMKMIRDNLPP-- 288 (346)
T ss_dssp TTCEECCSSSCCB--CCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH--HHHHHHHHSSCC--
T ss_pred cCceecCCCCCcc--cccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHH--HHHHHHHcCCCC--
Confidence 9999876543322 2467999999999999999999999999999999999999999632111 111111100000
Q ss_pred hhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 039533 866 MDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVH 926 (949)
Q Consensus 866 ~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 926 (949)
.. . .....+..+.+++.+||+.||++|||++|+++
T Consensus 289 ------~~-~-------------------~~~~~s~~~~dli~~~L~~dP~~R~ta~e~l~ 323 (346)
T 4fih_A 289 ------RL-K-------------------NLHKVSPSLKGFLDRLLVRDPAQRATAAELLK 323 (346)
T ss_dssp ------CC-S-------------------CGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred ------CC-C-------------------ccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 00 0 01133456789999999999999999999875
No 18
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=2e-48 Score=483.78 Aligned_cols=460 Identities=22% Similarity=0.220 Sum_probs=385.2
Q ss_pred EEEcCCCCCCccccCCCCCCCCCceeeccCceeccccCCcccCcccCcEEeeccccccCcC-CCCCCCCccceeecCCCc
Q 039533 69 LLDLRSLKLAGSVSHFIGNLSFLKQLYLQVNSFTHEIPSEIGGLRRLKVLALNNNSICGEI-PTNISRCSTLIPIHPQNN 147 (949)
Q Consensus 69 ~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~-p~~~~~l~~L~~L~l~~n 147 (949)
..|.++++++ .+|. ..++|++|+|++|.+++..|..|.++++|++|+|++|.+.+.+ |..|+++++|++|+|++|
T Consensus 8 ~~dcs~~~L~-~vP~---lp~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N 83 (844)
T 3j0a_A 8 IAFYRFCNLT-QVPQ---VLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSS 83 (844)
T ss_dssp EEEESCCCSS-CCCS---SCTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTC
T ss_pred EEEccCCCCC-CCCC---CCCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCC
Confidence 4567788888 4555 4589999999999999999999999999999999999777777 788999999999999999
Q ss_pred cccccccccccCCCCCcEEECCCCCCCCCCCCC--cCCCCCccEEeccccccCCCCC-CcccCCCccccccccCcccccc
Q 039533 148 QLVGKILSRFSSLSKTEILNLGSNHLTGSIPSS--LGNLSSIHTISLAYNNLDGTIP-NSFGWFENLVFLSLAANNLSVV 224 (949)
Q Consensus 148 ~l~~~~~~~~~~L~~L~~L~Ls~N~l~~~~p~~--~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~ 224 (949)
.+.+..|..|.++++|++|+|++|.+++.+|.. |+++++|++|+|++|.+++..+ ..|+++++|++|+|++|.++.+
T Consensus 84 ~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~ 163 (844)
T 3j0a_A 84 KIYFLHPDAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLV 163 (844)
T ss_dssp CCCEECTTSSCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCC
T ss_pred cCcccCHhHccCCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCee
Confidence 999999999999999999999999999877765 9999999999999999997765 5799999999999999988654
Q ss_pred cccccCCCCChhhh--ccccccccccCCCCCCCCCCcchhccccccCcccEEEccCCCCCccCCchhhcc----------
Q 039533 225 ENKLTGEVPSLEKL--QRLQHFTITSNSLGSGGNDDLSFLCSLTNATRLTWMHINSNNFGGLLPGCISNL---------- 292 (949)
Q Consensus 225 ~~~l~~~~~~l~~l--~~L~~L~l~~N~l~~~~~~~~~~~~~l~~~~~L~~L~L~~N~l~~~~p~~~~~l---------- 292 (949)
.. ..+..+ ++|+.|++++|.+....+..+...........|+.|++++|++++..|..+...
T Consensus 164 ~~------~~l~~l~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~ 237 (844)
T 3j0a_A 164 CE------HELEPLQGKTLSFFSLAANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLI 237 (844)
T ss_dssp CS------GGGHHHHHCSSCCCEECCSBSCCCCCCCCCSSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEE
T ss_pred CH------HHcccccCCccceEECCCCccccccccchhhcCCccccCceeEEecCCCcCchhHHHHHHhhcCccccccee
Confidence 21 235555 789999999999987544332221111112359999999999888777655432
Q ss_pred ---------------------------cccccEEEccCccccCCCCCCCCCCCcccEEEeecceecccCCCcccccCCCC
Q 039533 293 ---------------------------SKTIKTLFLNNNKIYGSIPAGIGNFVNLQRLDMWNNQLSGTIPPAIGELQNLK 345 (949)
Q Consensus 293 ---------------------------~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 345 (949)
+.+|+.|+|++|.+.+..|..|..+++|+.|+|++|++++..|..|.++++|+
T Consensus 238 l~~~~~~~~~~~~~l~~~~~~~f~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~ 317 (844)
T 3j0a_A 238 LAHHIMGAGFGFHNIKDPDQNTFAGLARSSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQ 317 (844)
T ss_dssp CCSSCCBCSSSCSSSTTGGGTTTTTTTTSCCCEEECTTCCCCEECSCCSSSCCCCCEEEEESCCCCEECTTTTTTCSSCC
T ss_pred cccccccccccccccCCCChhhhhccccCCccEEECCCCcccccChhhhhcCCCCCEEECCCCcCCCCChHHhcCCCCCC
Confidence 24699999999999999999999999999999999999999999999999999
Q ss_pred EEecCCcccccccCcccccccccceeecccccccccCCCCCCCCCCCcEEEeeCccccCCCCCcccCCcccceeeccCCC
Q 039533 346 ILGLNRNKLSGNIPPSIGNLKMLLNLFLNDNFLEVSIPSSLGQCESLIEINLSNNNLSGTIPPQFFSLSSLSISLDWSRN 425 (949)
Q Consensus 346 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~l~~~L~ls~N 425 (949)
.|+|++|++++..|..|.++++|+.|++++|.+++..+..|.++++|++|+|++|.+++ ++. ++++ ..|++++|
T Consensus 318 ~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~-i~~----~~~L-~~L~l~~N 391 (844)
T 3j0a_A 318 VLNLSYNLLGELYSSNFYGLPKVAYIDLQKNHIAIIQDQTFKFLEKLQTLDLRDNALTT-IHF----IPSI-PDIFLSGN 391 (844)
T ss_dssp EEEEESCCCSCCCSCSCSSCTTCCEEECCSCCCCCCCSSCSCSCCCCCEEEEETCCSCC-CSS----CCSC-SEEEEESC
T ss_pred EEECCCCCCCccCHHHhcCCCCCCEEECCCCCCCccChhhhcCCCCCCEEECCCCCCCc-ccC----CCCc-chhccCCC
Confidence 99999999998889999999999999999999998888899999999999999999983 433 3344 44555555
Q ss_pred ccC--------------------CCC-ccccccccccceeeeccccccccCCc-ccccccchhhcccCccccc-----cc
Q 039533 426 KLT--------------------GSL-PIEVGKLKILEFLYVYENRLEGEIPS-TFGNCIRLEQLGMGGNLFQ-----GP 478 (949)
Q Consensus 426 ~l~--------------------~~~-p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~l~~N~l~-----~~ 478 (949)
+++ +.. +..+..+++|+.|+|++|++++..+. .+..+++|+.|+|++|.++ +.
T Consensus 392 ~l~~l~~~~~~l~~L~ls~N~l~~l~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~ 471 (844)
T 3j0a_A 392 KLVTLPKINLTANLIHLSENRLENLDILYFLLRVPHLQILILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQLAWETEL 471 (844)
T ss_dssp CCCCCCCCCTTCCEEECCSCCCCSSTTHHHHTTCTTCCEEEEESCCCCCCCSSSSSCSCTTCCBCEEESCCCSSSCCSCC
T ss_pred CcccccccccccceeecccCccccCchhhhhhcCCccceeeCCCCcccccccccccccCCccccccCCCCcccccccccc
Confidence 544 321 12345789999999999999965544 4667899999999999997 55
Q ss_pred cCCCcCCCCCCCEEECCCCcCCCcCcccccCCc-cceEeCCCCcCcCcccccccccccccccccCCCC
Q 039533 479 ISSSLGSLRGLRVLDLSQNNLSGEIPKFLAGLS-LNNLNLSYNDLEGMVTTEGVFKNASATRILGNSK 545 (949)
Q Consensus 479 ~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~-L~~l~ls~N~l~~~~~~~~~~~~~~~~~~~gn~~ 545 (949)
.+..|..+++|+.|+|++|+|++.+|..+..++ |+.|+|++|+|++.++.... .++..+.+.+|..
T Consensus 472 ~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~-~~L~~L~Ls~N~l 538 (844)
T 3j0a_A 472 CWDVFEGLSHLQVLYLNHNYLNSLPPGVFSHLTALRGLSLNSNRLTVLSHNDLP-ANLEILDISRNQL 538 (844)
T ss_dssp CSSCSSCBCCEECCCCCHHHHTTCCTTSSSSCCSCSEEEEESCCCSSCCCCCCC-SCCCEEEEEEECC
T ss_pred chhhhcCcccccEEECCCCcccccChhHccchhhhheeECCCCCCCccChhhhh-ccccEEECCCCcC
Confidence 567899999999999999999999999888877 99999999999998765433 5667777777754
No 19
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=2.2e-50 Score=438.82 Aligned_cols=252 Identities=21% Similarity=0.289 Sum_probs=199.8
Q ss_pred hcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCC--cchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCcc
Q 039533 625 TSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHH--GASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDF 702 (949)
Q Consensus 625 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 702 (949)
.++|++.+.||+|+||+||+|++..+++.||||+++.... ...+.+.+|++++++++|||||++++++.+.+ .
T Consensus 23 me~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~-----~ 97 (350)
T 4b9d_A 23 MEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENG-----S 97 (350)
T ss_dssp CCCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETT-----E
T ss_pred ccceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECC-----E
Confidence 3689999999999999999999999999999999975532 23467899999999999999999999976544 7
Q ss_pred ceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEE
Q 039533 703 KASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARV 782 (949)
Q Consensus 703 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl 782 (949)
.|+||||++||+|.+++... ....+++.+++.|+.||+.||+|||++ +||||||||+|||++.++.+||
T Consensus 98 ~yiVmEy~~gg~L~~~i~~~--------~~~~~~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl 166 (350)
T 4b9d_A 98 LYIVMDYCEGGDLFKRINAQ--------KGVLFQEDQILDWFVQICLALKHVHDR---KILHRDIKSQNIFLTKDGTVQL 166 (350)
T ss_dssp EEEEEECCTTCBHHHHHHHT--------TTCCCCHHHHHHHHHHHHHHHHHHHHT---TCEETTCCGGGEEECTTCCEEE
T ss_pred EEEEEeCCCCCcHHHHHHHc--------CCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHHHEEECCCCCEEE
Confidence 99999999999999999621 234578999999999999999999988 9999999999999999999999
Q ss_pred eecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhccccCC
Q 039533 783 GDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKALP 862 (949)
Q Consensus 783 ~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~ 862 (949)
+|||+|+....... ......||+.|||||++.+..|+.++|||||||++|||+||+.||......+ .
T Consensus 167 ~DFGla~~~~~~~~--~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~-----~------ 233 (350)
T 4b9d_A 167 GDFGIARVLNSTVE--LARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKN-----L------ 233 (350)
T ss_dssp CSTTEESCCCHHHH--HHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHH-----H------
T ss_pred cccccceeecCCcc--cccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHH-----H------
Confidence 99999987643221 1224569999999999999999999999999999999999999996432111 0
Q ss_pred CchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 039533 863 DDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVH 926 (949)
Q Consensus 863 ~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 926 (949)
+..+......+.+ ...+..+.+++.+||+.||++|||++|+++
T Consensus 234 --~~~i~~~~~~~~~-------------------~~~s~~~~~li~~~L~~dP~~R~s~~e~l~ 276 (350)
T 4b9d_A 234 --VLKIISGSFPPVS-------------------LHYSYDLRSLVSQLFKRNPRDRPSVNSILE 276 (350)
T ss_dssp --HHHHHHTCCCCCC-------------------TTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred --HHHHHcCCCCCCC-------------------ccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 0111111111100 123456789999999999999999999976
No 20
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=1.2e-49 Score=431.21 Aligned_cols=258 Identities=22% Similarity=0.217 Sum_probs=206.2
Q ss_pred cCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCCcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCcccee
Q 039533 626 SGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFKAS 705 (949)
Q Consensus 626 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 705 (949)
+.|.+.++||+|+||.||+|++..+|+.||||+++.... ..+|+.++++++|||||++++++.+.+ ..|+
T Consensus 58 ~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~-----~~~E~~il~~l~HpnIV~l~~~~~~~~-----~~~i 127 (336)
T 4g3f_A 58 HWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF-----RVEELVACAGLSSPRIVPLYGAVREGP-----WVNI 127 (336)
T ss_dssp TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC-----CTHHHHTTTTCCCTTBCCEEEEEEETT-----EEEE
T ss_pred hheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh-----HHHHHHHHHhCCCCCCCcEEEEEEECC-----EEEE
Confidence 457778899999999999999999999999999975432 247999999999999999999976544 7899
Q ss_pred EeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCC-ceEEee
Q 039533 706 VYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYM-TARVGD 784 (949)
Q Consensus 706 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~-~~kl~D 784 (949)
||||++||+|.++++ ....+++.++..|+.||+.||+|||++ +||||||||+|||++.++ ++||+|
T Consensus 128 vmEy~~gg~L~~~l~----------~~~~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~~vKl~D 194 (336)
T 4g3f_A 128 FMELLEGGSLGQLIK----------QMGCLPEDRALYYLGQALEGLEYLHTR---RILHGDVKADNVLLSSDGSRAALCD 194 (336)
T ss_dssp EECCCTTCBHHHHHH----------HHSSCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCCGGGEEECTTSCCEEECC
T ss_pred EEeccCCCcHHHHHH----------HcCCCCHHHHHHHHHHHHHHHHHHHHC---CceecccCHHHEEEeCCCCEEEEee
Confidence 999999999999996 235699999999999999999999977 999999999999999887 699999
Q ss_pred cccceecCCCCCc---cccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhccccC
Q 039533 785 FGLARILSPDHTQ---TSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKAL 861 (949)
Q Consensus 785 fG~a~~~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~ 861 (949)
||+|+........ .......||+.|||||++.+..|+.++|||||||++|||+||+.||.........
T Consensus 195 FGla~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~--------- 265 (336)
T 4g3f_A 195 FGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLC--------- 265 (336)
T ss_dssp CTTCEEC------------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCCH---------
T ss_pred CCCCeEccCCCcccceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHH---------
Confidence 9999987654321 1222456999999999999999999999999999999999999999643322111
Q ss_pred CCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHHhHHhhc
Q 039533 862 PDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHELQSIKNILL 936 (949)
Q Consensus 862 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~~~~~ 936 (949)
..+..... +. ......++..+.+++.+||+.||++|||+.|+++.|........
T Consensus 266 ----~~i~~~~~---~~--------------~~~~~~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~~l~~~~ 319 (336)
T 4g3f_A 266 ----LKIASEPP---PI--------------REIPPSCAPLTAQAIQEGLRKEPVHRASAMELRRKVGKALQEVG 319 (336)
T ss_dssp ----HHHHHSCC---GG--------------GGSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHTT
T ss_pred ----HHHHcCCC---Cc--------------hhcCccCCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHhhhh
Confidence 00100000 00 00011345568899999999999999999999999988776544
No 21
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=2.5e-49 Score=428.69 Aligned_cols=281 Identities=21% Similarity=0.264 Sum_probs=205.8
Q ss_pred cCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCCcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCcccee
Q 039533 626 SGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFKAS 705 (949)
Q Consensus 626 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 705 (949)
.+|.+.++||+|+||+||+|++. |+.||||+++.... ....+..|+..+.+++|||||+++++|...+ ......++
T Consensus 3 r~i~L~~~iG~G~fG~Vy~~~~~--g~~VAvK~l~~~~~-~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~-~~~~~~~l 78 (303)
T 3hmm_A 3 RTIVLQESIGKGRFGEVWRGKWR--GEEVAVKIFSSREE-RSWFREAEIYQTVMLRHENILGFIAADNKDN-GTWTQLWL 78 (303)
T ss_dssp GGEEEEEEEEECSSSEEEEEEET--TEEEEEEEECGGGH-HHHHHHHHHHTSTTCCCTTBCCEEEEEEEEC-SSSEEEEE
T ss_pred cEEEEEEEEeeCCCeEEEEEEEC--CEEEEEEEECccch-hhHHHHHHHHHHhcCCCCCCCcEEEEEEecC-CCceEEEE
Confidence 35677899999999999999985 89999999964432 1223345666667889999999999987543 12235799
Q ss_pred EeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhC-----CCCCeEecCCCCCCeeecCCCce
Q 039533 706 VYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHD-----CQPVTAHCDLKPSNVLLDDYMTA 780 (949)
Q Consensus 706 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~-----~~~~ivHrDlkp~NIll~~~~~~ 780 (949)
||||+++|+|.++++ ...+++..+.+|+.|+++||+|||++ +.++|+||||||+|||++.++++
T Consensus 79 V~Ey~~~gsL~~~l~-----------~~~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~ 147 (303)
T 3hmm_A 79 VSDYHEHGSLFDYLN-----------RYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTC 147 (303)
T ss_dssp EEECCTTCBHHHHHH-----------HCCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCE
T ss_pred EecCCCCCcHHHHHH-----------hCCCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCE
Confidence 999999999999996 23589999999999999999999975 24589999999999999999999
Q ss_pred EEeecccceecCCCCCcc--ccccccCccCccCccccCCC------ccCCccchHHHHHHHHHHHhCCCCCccccccCch
Q 039533 781 RVGDFGLARILSPDHTQT--SSFSVKGSLGYIAPEYGVGC------EVSTNGDVYSYGILLLELVIGKKPIDIMFEGDIN 852 (949)
Q Consensus 781 kl~DfG~a~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~------~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~ 852 (949)
||+|||+|+......... ......||+.|||||++.+. .++.++|||||||++|||+||++||.........
T Consensus 148 Ki~DFGla~~~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p 227 (303)
T 3hmm_A 148 CIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLP 227 (303)
T ss_dssp EECCCTTCEEEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCT
T ss_pred EEEeCCCCccccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCcccccccc
Confidence 999999998875543321 22245699999999998754 4788999999999999999999988643322211
Q ss_pred hhhhccccCC-Cch-hhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHH
Q 039533 853 LHNFGRKALP-DDV-MDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHELQS 930 (949)
Q Consensus 853 ~~~~~~~~~~-~~~-~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~ 930 (949)
+......... +.. ..+.+..+.+...+. ....+++..+.+++.+||+.||++||||+||++.|++
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~rp~~p~~-------------~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~ 294 (303)
T 3hmm_A 228 YYDLVPSDPSVEEMRKVVCEQKLRPNIPNR-------------WQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQ 294 (303)
T ss_dssp TTTTSCSSCCHHHHHHHHTTSCCCCCCCGG-------------GGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHH
T ss_pred chhcccccchHHHHHHHHhcccCCCCCCcc-------------ccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHH
Confidence 1111100000 001 111222222211100 0112556788999999999999999999999999999
Q ss_pred hHHh
Q 039533 931 IKNI 934 (949)
Q Consensus 931 i~~~ 934 (949)
|.+.
T Consensus 295 l~~~ 298 (303)
T 3hmm_A 295 LSQQ 298 (303)
T ss_dssp HHHC
T ss_pred HHHH
Confidence 8764
No 22
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00 E-value=7e-49 Score=466.36 Aligned_cols=476 Identities=17% Similarity=0.184 Sum_probs=322.5
Q ss_pred cceeeeeEEeCCC-----------CcEEEEEcCCCCCCccccCCCCCCCCCceeeccCceeccccCCcccCcccCcEEee
Q 039533 52 FCKWYGVTCSRRH-----------QRVTLLDLRSLKLAGSVSHFIGNLSFLKQLYLQVNSFTHEIPSEIGGLRRLKVLAL 120 (949)
Q Consensus 52 ~C~w~gv~C~~~~-----------~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L 120 (949)
.|.|.|| |+... .+++.|||++|++++..+..++++++|++|+|++|++++..|..|+++++|++|+|
T Consensus 3 ~C~~~~~-c~~~~~~l~~ip~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L 81 (549)
T 2z81_A 3 SCDASGV-CDGRSRSFTSIPSGLTAAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDL 81 (549)
T ss_dssp EECTTSE-EECTTSCCSSCCSCCCTTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEC
T ss_pred cCCCCce-EECCCCccccccccCCCCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEEC
Confidence 5999999 97431 36888999999998888888899999999999999998888888999999999999
Q ss_pred ccccccCcCCCCCCCCccceeecCCCcccccc-ccccccCCCCCcEEECCCCCCCCCCC-CCcCCCCCccEEeccccccC
Q 039533 121 NNNSICGEIPTNISRCSTLIPIHPQNNQLVGK-ILSRFSSLSKTEILNLGSNHLTGSIP-SSLGNLSSIHTISLAYNNLD 198 (949)
Q Consensus 121 s~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~-~~~~~~~L~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~ 198 (949)
++|++++..|..|+++++|++|++++|.+++. .+..|.++++|++|+|++|.+.+.+| ..|+++++|++|+|++|+++
T Consensus 82 s~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~ 161 (549)
T 2z81_A 82 SDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLR 161 (549)
T ss_dssp TTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCC
T ss_pred CCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCCccc
Confidence 99999877777788999999999999998874 56788899999999999998554554 67888999999999999998
Q ss_pred CCCCCcccCCCccccccccCcccccccccccCCCCChhhhccccccccccCCCCCCCCCCcchhccccccCcccEEEccC
Q 039533 199 GTIPNSFGWFENLVFLSLAANNLSVVENKLTGEVPSLEKLQRLQHFTITSNSLGSGGNDDLSFLCSLTNATRLTWMHINS 278 (949)
Q Consensus 199 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~l~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~~~~L~~L~L~~ 278 (949)
+..|..++.+++|++|++++|.+..++..+ +..+++|++|++++|+++........ ....+++|+.|++++
T Consensus 162 ~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~------~~~l~~L~~L~L~~n~l~~~~~~~~~---~~~~~~~L~~L~l~~ 232 (549)
T 2z81_A 162 NYQSQSLKSIRDIHHLTLHLSESAFLLEIF------ADILSSVRYLELRDTNLARFQFSPLP---VDEVSSPMKKLAFRG 232 (549)
T ss_dssp EECTTTTTTCSEEEEEEEECSBSTTHHHHH------HHSTTTBSEEEEESCBCTTCCCCCCS---SCCCCCCCCEEEEES
T ss_pred ccChhhhhccccCceEecccCcccccchhh------HhhcccccEEEccCCccccccccccc---hhhhhhcccceeccc
Confidence 888889999999999999988876544321 24577889999999988765322211 123467788888888
Q ss_pred CCCCccCCchhhcc---cccccEEEccCccccCCC------CCCCCCCCcccEEEeecceecccC-----CCcccccCCC
Q 039533 279 NNFGGLLPGCISNL---SKTIKTLFLNNNKIYGSI------PAGIGNFVNLQRLDMWNNQLSGTI-----PPAIGELQNL 344 (949)
Q Consensus 279 N~l~~~~p~~~~~l---~~~L~~L~L~~N~l~~~~------~~~~~~l~~L~~L~L~~N~l~~~~-----p~~~~~l~~L 344 (949)
|.+++..+..+... ..+|+.|++++|.+.+.. ...+..+++|+.|++++|.+.... +..+..+.+|
T Consensus 233 n~l~~~~~~~l~~~~~~~~~L~~l~l~~~~~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~i~~~~~~~~l~~~~~~~~~L 312 (549)
T 2z81_A 233 SVLTDESFNELLKLLRYILELSEVEFDDCTLNGLGDFNPSESDVVSELGKVETVTIRRLHIPQFYLFYDLSTVYSLLEKV 312 (549)
T ss_dssp CEEEHHHHHHHHGGGGGCTTCCEEEEESCEEECCSCCCCCTTTCCCCCTTCCEEEEESCBCSCGGGSCCCCHHHHHSTTC
T ss_pred cccchhHHHHHHHHhhhhccccccccccccccccccccccchhhhhhhcccccccccccccchhhhcccchhhhhhcccc
Confidence 88876555443321 245788888888876532 122445556666666666554211 1112223456
Q ss_pred CEEecCCcccccccCccc-ccccccceeecccccccccC---CCCCCCCCCCcEEEeeCccccCCCC--CcccCCcccce
Q 039533 345 KILGLNRNKLSGNIPPSI-GNLKMLLNLFLNDNFLEVSI---PSSLGQCESLIEINLSNNNLSGTIP--PQFFSLSSLSI 418 (949)
Q Consensus 345 ~~L~Ls~N~l~~~~p~~~-~~l~~L~~L~L~~N~l~~~~---p~~~~~l~~L~~L~l~~N~l~~~~p--~~~~~l~~l~~ 418 (949)
+.|++++|+++ .+|..+ .++++|++|++++|++++.+ +..++.+++|++|++++|++++..+ ..+..+++| +
T Consensus 313 ~~L~l~~n~l~-~ip~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~l~~L-~ 390 (549)
T 2z81_A 313 KRITVENSKVF-LVPCSFSQHLKSLEFLDLSENLMVEEYLKNSACKGAWPSLQTLVLSQNHLRSMQKTGEILLTLKNL-T 390 (549)
T ss_dssp CEEEEESSCCC-CCCHHHHHHCTTCCEEECCSSCCCHHHHHHHTCTTSSTTCCEEECTTSCCCCHHHHHHHGGGCTTC-C
T ss_pred eEEEeccCccc-cCCHHHHhcCccccEEEccCCccccccccchhhhhccccCcEEEccCCcccccccchhhhhcCCCC-C
Confidence 66666666665 455544 35666666666666666554 2345566666666666666653221 335556666 5
Q ss_pred eeccCCCccCCCCccccccccccceeeeccccccccCCcccccccchhhcccCccccccccCCCcCCCCCCCEEECCCCc
Q 039533 419 SLDWSRNKLTGSLPIEVGKLKILEFLYVYENRLEGEIPSTFGNCIRLEQLGMGGNLFQGPISSSLGSLRGLRVLDLSQNN 498 (949)
Q Consensus 419 ~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~ 498 (949)
.|++++|+++ .+|..+..+++|++|++++|+++ .+|..+. ++|+.|+|++|+|++.+ ..+++|+.|+|++|+
T Consensus 391 ~L~Ls~N~l~-~lp~~~~~~~~L~~L~Ls~N~l~-~l~~~~~--~~L~~L~Ls~N~l~~~~----~~l~~L~~L~Ls~N~ 462 (549)
T 2z81_A 391 SLDISRNTFH-PMPDSCQWPEKMRFLNLSSTGIR-VVKTCIP--QTLEVLDVSNNNLDSFS----LFLPRLQELYISRNK 462 (549)
T ss_dssp EEECTTCCCC-CCCSCCCCCTTCCEEECTTSCCS-CCCTTSC--TTCSEEECCSSCCSCCC----CCCTTCCEEECCSSC
T ss_pred EEECCCCCCc-cCChhhcccccccEEECCCCCcc-cccchhc--CCceEEECCCCChhhhc----ccCChhcEEECCCCc
Confidence 6666666666 45666666666666666666666 3343332 45666666666666532 356666666666666
Q ss_pred CCCcCcccccCCccceEeCCCCcCcCcccc-cccccccccccccCCCCCCC
Q 039533 499 LSGEIPKFLAGLSLNNLNLSYNDLEGMVTT-EGVFKNASATRILGNSKLCG 548 (949)
Q Consensus 499 l~~~~p~~~~~~~L~~l~ls~N~l~~~~~~-~~~~~~~~~~~~~gn~~~c~ 548 (949)
|+ .+|.......|+.|+|++|++++.+|. ...+..+..+.+.+|++.|.
T Consensus 463 l~-~ip~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~ 512 (549)
T 2z81_A 463 LK-TLPDASLFPVLLVMKISRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCS 512 (549)
T ss_dssp CS-SCCCGGGCTTCCEEECCSSCCCCCCTTGGGGCTTCCEEECCSSCBCCC
T ss_pred cC-cCCCcccCccCCEEecCCCccCCcCHHHHhcCcccCEEEecCCCccCC
Confidence 66 455432222366666666666666554 24455556666666666553
No 23
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=6.5e-50 Score=427.86 Aligned_cols=249 Identities=21% Similarity=0.284 Sum_probs=206.5
Q ss_pred cCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecC---CCcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCcc
Q 039533 626 SGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQ---HHGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDF 702 (949)
Q Consensus 626 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 702 (949)
++|++.+.||+|+||+||+|++..+++.||||+++.. .....+.+.+|++++++++|||||++++++.+.+ .
T Consensus 32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~-----~ 106 (311)
T 4aw0_A 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDE-----K 106 (311)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSS-----E
T ss_pred cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCC-----E
Confidence 5799999999999999999999999999999999743 2334578999999999999999999999976544 8
Q ss_pred ceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEE
Q 039533 703 KASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARV 782 (949)
Q Consensus 703 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl 782 (949)
.|+||||++||+|.+++. ..+.+++.+++.|+.||+.||+|||++ +|+||||||+|||++.++.+||
T Consensus 107 ~yivmEy~~gG~L~~~i~----------~~~~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDlKPeNILl~~~g~vKl 173 (311)
T 4aw0_A 107 LYFGLSYAKNGELLKYIR----------KIGSFDETCTRFYTAEIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQI 173 (311)
T ss_dssp EEEEECCCTTEEHHHHHH----------HHSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEE
T ss_pred EEEEEecCCCCCHHHHHH----------HcCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEEcCCCCEEE
Confidence 999999999999999996 335699999999999999999999988 9999999999999999999999
Q ss_pred eecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhccccCC
Q 039533 783 GDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKALP 862 (949)
Q Consensus 783 ~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~ 862 (949)
+|||+|+.+.............||+.|||||++.+..|+.++||||+||++|||+||+.||....... ..
T Consensus 174 ~DFGla~~~~~~~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~--~~-------- 243 (311)
T 4aw0_A 174 TDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGL--IF-------- 243 (311)
T ss_dssp CCCTTCEECCTTTTCCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH--HH--------
T ss_pred EEcCCceecCCCCCcccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH--HH--------
Confidence 99999998865544444445679999999999999999999999999999999999999996432110 00
Q ss_pred CchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHH
Q 039533 863 DDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVV 925 (949)
Q Consensus 863 ~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~ 925 (949)
..+...... .+ ...+.++.+++.+|++.||++|||++|+.
T Consensus 244 ---~~i~~~~~~-~p-------------------~~~s~~~~dli~~lL~~dp~~R~t~~e~~ 283 (311)
T 4aw0_A 244 ---AKIIKLEYD-FP-------------------EKFFPKARDLVEKLLVLDATKRLGCEEME 283 (311)
T ss_dssp ---HHHHHTCCC-CC-------------------TTCCHHHHHHHHHHSCSSGGGSTTSGGGT
T ss_pred ---HHHHcCCCC-CC-------------------cccCHHHHHHHHHHccCCHhHCcChHHHc
Confidence 011110000 00 01234578999999999999999999874
No 24
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=5.3e-49 Score=419.29 Aligned_cols=251 Identities=23% Similarity=0.356 Sum_probs=197.2
Q ss_pred CCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCC--cchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCccceeE
Q 039533 629 SSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHH--GASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFKASV 706 (949)
Q Consensus 629 ~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv 706 (949)
.+.++||+|+||+||+|.+..+++.||+|++..... ...+++.+|++++++++|||||++++++.... .++...++|
T Consensus 29 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~-~~~~~~~lv 107 (290)
T 3fpq_A 29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTV-KGKKCIVLV 107 (290)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEE-TTEEEEEEE
T ss_pred EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeecc-CCCcEEEEE
Confidence 556789999999999999999999999999975432 23467999999999999999999999986432 233468999
Q ss_pred eeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeec-CCCceEEeec
Q 039533 707 YEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLD-DYMTARVGDF 785 (949)
Q Consensus 707 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~-~~~~~kl~Df 785 (949)
|||+++|+|.+++. ....+++..+..|+.||+.||+|||++ .++|+||||||+|||++ .++.+||+||
T Consensus 108 mEy~~gg~L~~~l~----------~~~~l~~~~~~~~~~qi~~aL~ylH~~-~~~IiHRDlKp~NILl~~~~g~vKl~DF 176 (290)
T 3fpq_A 108 TELMTSGTLKTYLK----------RFKVMKIKVLRSWCRQILKGLQFLHTR-TPPIIHRDLKCDNIFITGPTGSVKIGDL 176 (290)
T ss_dssp EECCCSCBHHHHHH----------HHSSCCHHHHHHHHHHHHHHHHHHHTS-SSCCCCCCCCGGGEEESSTTSCEEECCT
T ss_pred EeCCCCCCHHHHHH----------hcCCCCHHHHHHHHHHHHHHHHHHHHC-CCCEEecccChhheeEECCCCCEEEEeC
Confidence 99999999999996 235689999999999999999999987 33499999999999998 4799999999
Q ss_pred ccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhccccCCCch
Q 039533 786 GLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKALPDDV 865 (949)
Q Consensus 786 G~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~ 865 (949)
|+|+...... .....||+.|||||++.+ +|+.++|||||||++|||+||+.||........ +
T Consensus 177 Gla~~~~~~~----~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~~~~~-~------------ 238 (290)
T 3fpq_A 177 GLATLKRASF----AKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQ-I------------ 238 (290)
T ss_dssp TGGGGCCTTS----BEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHH-H------------
T ss_pred cCCEeCCCCc----cCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCCcHHH-H------------
Confidence 9998643322 124579999999999875 699999999999999999999999963211110 0
Q ss_pred hhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 039533 866 MDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVH 926 (949)
Q Consensus 866 ~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 926 (949)
...+.....+.. + ....++++.+++.+||+.||++|||++|+++
T Consensus 239 ~~~i~~~~~~~~---------------~--~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~ 282 (290)
T 3fpq_A 239 YRRVTSGVKPAS---------------F--DKVAIPEVKEIIEGCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp HHHHTTTCCCGG---------------G--GGCCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred HHHHHcCCCCCC---------------C--CccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 000100000000 0 0012345788999999999999999999875
No 25
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=4.1e-49 Score=438.73 Aligned_cols=250 Identities=22% Similarity=0.291 Sum_probs=207.6
Q ss_pred cCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCCcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCcccee
Q 039533 626 SGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFKAS 705 (949)
Q Consensus 626 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 705 (949)
+.|++.+.||+|+||.||+|++..+|+.||||++........+.+.+|+.+|++++|||||++++++...+ ..|+
T Consensus 151 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~-----~~~i 225 (423)
T 4fie_A 151 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGD-----ELWV 225 (423)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETT-----EEEE
T ss_pred HhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECC-----EEEE
Confidence 46999999999999999999999999999999998766666678999999999999999999999976554 7999
Q ss_pred EeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEeec
Q 039533 706 VYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVGDF 785 (949)
Q Consensus 706 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~Df 785 (949)
|||||+||+|.+++. ...+++.++..|+.||+.||+|||++ +||||||||+|||++.+|.+||+||
T Consensus 226 VmEy~~gG~L~~~i~-----------~~~l~e~~~~~~~~qil~aL~ylH~~---~IiHRDiKp~NILl~~~g~vKl~DF 291 (423)
T 4fie_A 226 VMEFLEGGALTDIVT-----------HTRMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDF 291 (423)
T ss_dssp EEECCTTEEHHHHHH-----------HSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSTTTEEECTTCCEEECCC
T ss_pred EEeCCCCCcHHHHHh-----------ccCCCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEecC
Confidence 999999999999986 23589999999999999999999988 9999999999999999999999999
Q ss_pred ccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhccccCCCch
Q 039533 786 GLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKALPDDV 865 (949)
Q Consensus 786 G~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~ 865 (949)
|+|+.+....... ...+||+.|||||++.+..|+.++|||||||++|||++|+.||...... ..........+.
T Consensus 292 Gla~~~~~~~~~~--~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~--~~~~~i~~~~~~-- 365 (423)
T 4fie_A 292 GFCAQVSKEVPRR--KSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPL--KAMKMIRDNLPP-- 365 (423)
T ss_dssp TTCEECCSSCCCB--CCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH--HHHHHHHHSCCC--
T ss_pred ccceECCCCCccc--cccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHH--HHHHHHHcCCCC--
Confidence 9999876544322 2467999999999999999999999999999999999999999632111 111111110000
Q ss_pred hhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 039533 866 MDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVH 926 (949)
Q Consensus 866 ~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 926 (949)
.+. ....++..+.+++.+||+.||++|||++|+++
T Consensus 366 ------~~~--------------------~~~~~s~~~~dli~~~L~~dP~~R~ta~ell~ 400 (423)
T 4fie_A 366 ------RLK--------------------NLHKVSPSLKGFLDRLLVRDPAQRATAAELLK 400 (423)
T ss_dssp ------CCS--------------------CTTSSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred ------CCc--------------------ccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 000 00123456789999999999999999999875
No 26
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.6e-47 Score=457.09 Aligned_cols=454 Identities=22% Similarity=0.238 Sum_probs=387.4
Q ss_pred EEcCCCCCCccccCCCCCCCCCceeeccCceeccccCCcccCcccCcEEeeccccccCcCCCCCCCCccceeecCCCccc
Q 039533 70 LDLRSLKLAGSVSHFIGNLSFLKQLYLQVNSFTHEIPSEIGGLRRLKVLALNNNSICGEIPTNISRCSTLIPIHPQNNQL 149 (949)
Q Consensus 70 l~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~l 149 (949)
++.++.+++ .+|..+. +++++|+|++|++++..+..|.++++|++|+|++|++++..|..|+++++|++|++++|++
T Consensus 12 ~~c~~~~l~-~ip~~l~--~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l 88 (570)
T 2z63_A 12 YQCMELNFY-KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPI 88 (570)
T ss_dssp EECCSSCCS-SCCSSSC--SSCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCC
T ss_pred EEeCCCCcc-ccCCCcc--ccccEEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcC
Confidence 455555665 4565543 5799999999999988888999999999999999999987788999999999999999999
Q ss_pred cccccccccCCCCCcEEECCCCCCCCCCCCCcCCCCCccEEeccccccCC-CCCCcccCCCccccccccCcccccccccc
Q 039533 150 VGKILSRFSSLSKTEILNLGSNHLTGSIPSSLGNLSSIHTISLAYNNLDG-TIPNSFGWFENLVFLSLAANNLSVVENKL 228 (949)
Q Consensus 150 ~~~~~~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~~~~l 228 (949)
++..+..|.++++|++|+|++|.+++..+..++++++|++|+|++|.+++ .+|..|+++++|++|++++|+++.+..
T Consensus 89 ~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~~~-- 166 (570)
T 2z63_A 89 QSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYC-- 166 (570)
T ss_dssp CEECTTTTTTCTTCCEEECTTSCCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEECG--
T ss_pred CccCHhhhcCccccccccccccccccCCCccccccccccEEecCCCccceecChhhhcccCCCCEEeCcCCccceecH--
Confidence 99999999999999999999999997666689999999999999999997 479999999999999999999876542
Q ss_pred cCCCCChhhhccc----cccccccCCCCCCCCCCcchhccccccCcccEEEccCC-------------------------
Q 039533 229 TGEVPSLEKLQRL----QHFTITSNSLGSGGNDDLSFLCSLTNATRLTWMHINSN------------------------- 279 (949)
Q Consensus 229 ~~~~~~l~~l~~L----~~L~l~~N~l~~~~~~~~~~~~~l~~~~~L~~L~L~~N------------------------- 279 (949)
..+..+++| +++++++|.+....+..+. . .+|+.|++++|
T Consensus 167 ----~~~~~l~~L~~~~~~L~l~~n~l~~~~~~~~~------~-~~L~~L~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~ 235 (570)
T 2z63_A 167 ----TDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFK------E-IRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLG 235 (570)
T ss_dssp ----GGGHHHHTCTTCCCEEECTTCCCCEECTTTTT------T-CEEEEEEEESCCSCTTHHHHHHHTTTTCEEEEEEEE
T ss_pred ----HHccchhccchhhhhcccCCCCceecCHHHhc------c-CcceeEecccccccccchhhhhcCccccceeeeccc
Confidence 246677777 8899999999876544322 1 24666666655
Q ss_pred ---------------------------------CCCccCCchhhcccccccEEEccCccccCCCCCCCCCCCcccEEEee
Q 039533 280 ---------------------------------NFGGLLPGCISNLSKTIKTLFLNNNKIYGSIPAGIGNFVNLQRLDMW 326 (949)
Q Consensus 280 ---------------------------------~l~~~~p~~~~~l~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~ 326 (949)
.+.+.+|..+..+ ++|++|++++|.++ .+|..+..+ +|++|+++
T Consensus 236 ~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~~~~~~~~~~~~~~~~l-~~L~~L~l~~~~l~-~l~~~~~~~-~L~~L~l~ 312 (570)
T 2z63_A 236 EFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDDIIDLFNCL-TNVSSFSLVSVTIE-RVKDFSYNF-GWQHLELV 312 (570)
T ss_dssp ECCCCSSCEECCTTTTGGGGGSEEEEEEEEETTEEESCSTTTTGGG-TTCSEEEEESCEEC-SCCBCCSCC-CCSEEEEE
T ss_pred cccCchhhhhcchhhhccccccchhhhhhhcchhhhhhchhhhcCc-CcccEEEecCccch-hhhhhhccC-CccEEeec
Confidence 3445556666665 46888999988888 577778888 88999999
Q ss_pred cceecccCCCcccccCCCCEEecCCcccccccCcccccccccceeecccccccccC--CCCCCCCCCCcEEEeeCccccC
Q 039533 327 NNQLSGTIPPAIGELQNLKILGLNRNKLSGNIPPSIGNLKMLLNLFLNDNFLEVSI--PSSLGQCESLIEINLSNNNLSG 404 (949)
Q Consensus 327 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~--p~~~~~l~~L~~L~l~~N~l~~ 404 (949)
+|.+. .+|. ..+++|+.|++++|.+.+..+. ..+++|++|++++|.+++.. |..+..+++|++|++++|++++
T Consensus 313 ~n~~~-~l~~--~~l~~L~~L~l~~n~~~~~~~~--~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~ 387 (570)
T 2z63_A 313 NCKFG-QFPT--LKLKSLKRLTFTSNKGGNAFSE--VDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVIT 387 (570)
T ss_dssp SCBCS-SCCB--CBCSSCCEEEEESCBSCCBCCC--CBCTTCCEEECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEEE
T ss_pred cCccc-ccCc--ccccccCEEeCcCCcccccccc--ccCCCCCEEeCcCCccCccccccccccccCccCEEECCCCcccc
Confidence 99888 5554 4678899999999988876665 78999999999999998654 6778899999999999999995
Q ss_pred CCCCcccCCcccceeeccCCCccCCCCc-cccccccccceeeeccccccccCCcccccccchhhcccCccccc-cccCCC
Q 039533 405 TIPPQFFSLSSLSISLDWSRNKLTGSLP-IEVGKLKILEFLYVYENRLEGEIPSTFGNCIRLEQLGMGGNLFQ-GPISSS 482 (949)
Q Consensus 405 ~~p~~~~~l~~l~~~L~ls~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~-~~~~~~ 482 (949)
+|..+..+++| +.|++++|.+++..| ..+..+++|++|++++|++.+..|..|.++++|+.|+|++|.++ +.+|..
T Consensus 388 -~~~~~~~l~~L-~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~ 465 (570)
T 2z63_A 388 -MSSNFLGLEQL-EHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDI 465 (570)
T ss_dssp -EEEEEETCTTC-CEEECTTSEEESCTTSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSC
T ss_pred -ccccccccCCC-CEEEccCCccccccchhhhhcCCCCCEEeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhh
Confidence 55558899999 899999999998766 57899999999999999999999999999999999999999998 689999
Q ss_pred cCCCCCCCEEECCCCcCCCcCcccccCCc-cceEeCCCCcCcCccccc-ccccccccccccCCCCCCCC
Q 039533 483 LGSLRGLRVLDLSQNNLSGEIPKFLAGLS-LNNLNLSYNDLEGMVTTE-GVFKNASATRILGNSKLCGG 549 (949)
Q Consensus 483 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~-L~~l~ls~N~l~~~~~~~-~~~~~~~~~~~~gn~~~c~~ 549 (949)
+..+++|+.|+|++|++++.+|..+..++ |++|++++|++++.+|.. ..+..+..+.+.+|++.|.-
T Consensus 466 ~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~ 534 (570)
T 2z63_A 466 FTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSC 534 (570)
T ss_dssp CTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCT
T ss_pred hhcccCCCEEECCCCccccCChhhhhcccCCCEEeCCCCcCCCCCHHHhhcccCCcEEEecCCcccCCC
Confidence 99999999999999999999899988877 999999999999987753 56677888999999998853
No 27
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=9e-49 Score=413.61 Aligned_cols=247 Identities=22% Similarity=0.299 Sum_probs=188.5
Q ss_pred hcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCC---CcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCc
Q 039533 625 TSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQH---HGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGND 701 (949)
Q Consensus 625 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 701 (949)
.++|++.+.||+|+||+||+|++..+++.||||+++... ....+++.+|++++++++|||||++++++.+.+
T Consensus 12 ig~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~----- 86 (275)
T 3hyh_A 12 IGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKD----- 86 (275)
T ss_dssp --CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSS-----
T ss_pred eeCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECC-----
Confidence 368999999999999999999999899999999997543 233467999999999999999999999976544
Q ss_pred cceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceE
Q 039533 702 FKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTAR 781 (949)
Q Consensus 702 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~k 781 (949)
..++||||+ +|+|.+++. ....+++.++..++.||+.||+|||++ +|+||||||+|||+++++++|
T Consensus 87 ~~~ivmEy~-~g~L~~~l~----------~~~~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDiKP~NILl~~~~~vk 152 (275)
T 3hyh_A 87 EIIMVIEYA-GNELFDYIV----------QRDKMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVK 152 (275)
T ss_dssp EEEEEEECC-CEEHHHHHH----------HSCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTCCEE
T ss_pred EEEEEEeCC-CCCHHHHHH----------HcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCChHHeEECCCCCEE
Confidence 899999999 679999986 235699999999999999999999988 999999999999999999999
Q ss_pred EeecccceecCCCCCccccccccCccCccCccccCCCcc-CCccchHHHHHHHHHHHhCCCCCccccccCchhhhhcccc
Q 039533 782 VGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEV-STNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKA 860 (949)
Q Consensus 782 l~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~ 860 (949)
|+|||+|+........ ....||+.|||||++.+..+ +.++||||+||++|||+||+.||...... ....
T Consensus 153 l~DFGla~~~~~~~~~---~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~~--~~~~----- 222 (275)
T 3hyh_A 153 IADFGLSNIMTDGNFL---KTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIP--VLFK----- 222 (275)
T ss_dssp ECCSSCC------------------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHH-----
T ss_pred EeecCCCeecCCCCcc---CCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCHH--HHHH-----
Confidence 9999999876543322 23569999999999998876 58999999999999999999999632111 0000
Q ss_pred CCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 039533 861 LPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVH 926 (949)
Q Consensus 861 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 926 (949)
.+..... ..+ ...+..+.+++.+|++.||++|||++|+++
T Consensus 223 ------~i~~~~~-~~p-------------------~~~s~~~~~li~~~L~~dP~~R~s~~eil~ 262 (275)
T 3hyh_A 223 ------NISNGVY-TLP-------------------KFLSPGAAGLIKRMLIVNPLNRISIHEIMQ 262 (275)
T ss_dssp ------HHHHTCC-CCC-------------------TTSCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred ------HHHcCCC-CCC-------------------CCCCHHHHHHHHHHccCChhHCcCHHHHHc
Confidence 0000000 000 012345789999999999999999999976
No 28
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=7.7e-48 Score=469.21 Aligned_cols=415 Identities=19% Similarity=0.239 Sum_probs=333.7
Q ss_pred CCCceeeccCceeccccCCcccCcccCcEEee-ccccccCcCCCCC----------------------------------
Q 039533 89 SFLKQLYLQVNSFTHEIPSEIGGLRRLKVLAL-NNNSICGEIPTNI---------------------------------- 133 (949)
Q Consensus 89 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L-s~N~l~~~~p~~~---------------------------------- 133 (949)
..++.|+|++|+++|.+|++|++|++|++|+| ++|.++|..|..-
T Consensus 323 ~~V~~L~Ls~~~L~G~ip~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~ 402 (876)
T 4ecn_A 323 GRVTGLSLAGFGAKGRVPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSD 402 (876)
T ss_dssp SCEEEEECTTTCCEEEECGGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCH
T ss_pred CCEEEEECccCCCCCcCchHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhH
Confidence 57899999999999999999999999999999 9999888744321
Q ss_pred -----------------CCCccceeecCCC--ccccccccccccCCCCCcEEECCCCCCCC-----------------CC
Q 039533 134 -----------------SRCSTLIPIHPQN--NQLVGKILSRFSSLSKTEILNLGSNHLTG-----------------SI 177 (949)
Q Consensus 134 -----------------~~l~~L~~L~l~~--n~l~~~~~~~~~~L~~L~~L~Ls~N~l~~-----------------~~ 177 (949)
.....++.+.+.. |++++ +|..|.+|++|++|+|++|+|+| .+
T Consensus 403 l~~~~l~~~~~~~~i~~~~~l~l~~l~l~~~~N~L~~-IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~i 481 (876)
T 4ecn_A 403 LLQDAINRNPEMKPIKKDSRISLKDTQIGNLTNRITF-ISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYE 481 (876)
T ss_dssp HHHHHHHTCTTSCCCCCCCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHT
T ss_pred HHHHHhhhCccccccccccccchhhceeccccCcccc-hhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccC
Confidence 1122344444443 88888 78889999999999999999998 38
Q ss_pred CCCcC--CCCCccEEeccccccCCCCCCcccCCCccccccccCcc-ccc--ccccccCCCCChhhhccccccccccCCCC
Q 039533 178 PSSLG--NLSSIHTISLAYNNLDGTIPNSFGWFENLVFLSLAANN-LSV--VENKLTGEVPSLEKLQRLQHFTITSNSLG 252 (949)
Q Consensus 178 p~~~~--~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~-l~~--~~~~l~~~~~~l~~l~~L~~L~l~~N~l~ 252 (949)
|..++ ++++|++|+|++|++.+.+|..|+++++|++|+|++|+ ++. ++.. +..++
T Consensus 482 P~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~-------i~~L~------------- 541 (876)
T 4ecn_A 482 NEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKAD-------WTRLA------------- 541 (876)
T ss_dssp TSCCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHH-------HHHHH-------------
T ss_pred ChhhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHH-------HHhhh-------------
Confidence 88887 99999999999999999999999999999999999887 652 2211 22221
Q ss_pred CCCCCCcchhccccccCcccEEEccCCCCCccCCc--hhhcccccccEEEccCccccCCCCCCCCCCCcccEEEeeccee
Q 039533 253 SGGNDDLSFLCSLTNATRLTWMHINSNNFGGLLPG--CISNLSKTIKTLFLNNNKIYGSIPAGIGNFVNLQRLDMWNNQL 330 (949)
Q Consensus 253 ~~~~~~~~~~~~l~~~~~L~~L~L~~N~l~~~~p~--~~~~l~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l 330 (949)
..+..+++|++|+|++|+++ .+|. .+.+++ +|++|+|++|+|+ .+| .|+.+++|++|+|++|++
T Consensus 542 ----------~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L~-~L~~L~Ls~N~l~-~lp-~~~~L~~L~~L~Ls~N~l 607 (876)
T 4ecn_A 542 ----------DDEDTGPKIQIFYMGYNNLE-EFPASASLQKMV-KLGLLDCVHNKVR-HLE-AFGTNVKLTDLKLDYNQI 607 (876)
T ss_dssp ----------HCTTTTTTCCEEECCSSCCC-BCCCHHHHTTCT-TCCEEECTTSCCC-BCC-CCCTTSEESEEECCSSCC
T ss_pred ----------hcccccCCccEEEeeCCcCC-ccCChhhhhcCC-CCCEEECCCCCcc-cch-hhcCCCcceEEECcCCcc
Confidence 02334567888888888888 6777 777774 6888899888888 777 888888899999999988
Q ss_pred cccCCCcccccCC-CCEEecCCcccccccCcccccccc--cceeecccccccccCCCCC---C--CCCCCcEEEeeCccc
Q 039533 331 SGTIPPAIGELQN-LKILGLNRNKLSGNIPPSIGNLKM--LLNLFLNDNFLEVSIPSSL---G--QCESLIEINLSNNNL 402 (949)
Q Consensus 331 ~~~~p~~~~~l~~-L~~L~Ls~N~l~~~~p~~~~~l~~--L~~L~L~~N~l~~~~p~~~---~--~l~~L~~L~l~~N~l 402 (949)
+ .+|..+.++++ |+.|+|++|+|+ .+|..+..++. |+.|+|++|++++.+|... . .+++|+.|+|++|++
T Consensus 608 ~-~lp~~l~~l~~~L~~L~Ls~N~L~-~lp~~~~~~~~~~L~~L~Ls~N~l~g~ip~l~~~l~~~~~~~L~~L~Ls~N~L 685 (876)
T 4ecn_A 608 E-EIPEDFCAFTDQVEGLGFSHNKLK-YIPNIFNAKSVYVMGSVDFSYNKIGSEGRNISCSMDDYKGINASTVTLSYNEI 685 (876)
T ss_dssp S-CCCTTSCEECTTCCEEECCSSCCC-SCCSCCCTTCSSCEEEEECCSSCTTTTSSSCSSCTTTCCCCCEEEEECCSSCC
T ss_pred c-cchHHHhhccccCCEEECcCCCCC-cCchhhhccccCCCCEEECcCCcCCCccccchhhhccccCCCcCEEEccCCcC
Confidence 8 78888888888 999999999888 77887777654 8899999998887766433 2 345788999999999
Q ss_pred cCCCCCccc-CCcccceeeccCCCccCCCCcccccc--------ccccceeeeccccccccCCcccc--cccchhhcccC
Q 039533 403 SGTIPPQFF-SLSSLSISLDWSRNKLTGSLPIEVGK--------LKILEFLYVYENRLEGEIPSTFG--NCIRLEQLGMG 471 (949)
Q Consensus 403 ~~~~p~~~~-~l~~l~~~L~ls~N~l~~~~p~~~~~--------l~~L~~L~Ls~N~l~~~~p~~~~--~l~~L~~L~l~ 471 (949)
+ .+|..++ .+++| +.|+|++|+++ .+|..+.. +++|+.|+|++|+|+ .+|..+. .+++|+.|+|+
T Consensus 686 ~-~lp~~~~~~l~~L-~~L~Ls~N~L~-~ip~~~~~~~~~~l~nl~~L~~L~Ls~N~L~-~lp~~l~~~~l~~L~~L~Ls 761 (876)
T 4ecn_A 686 Q-KFPTELFATGSPI-STIILSNNLMT-SIPENSLKPKDGNYKNTYLLTTIDLRFNKLT-SLSDDFRATTLPYLSNMDVS 761 (876)
T ss_dssp C-SCCHHHHHTTCCC-SEEECCSCCCS-CCCTTSSSCTTSCCTTGGGCCEEECCSSCCC-CCCGGGSTTTCTTCCEEECC
T ss_pred C-ccCHHHHccCCCC-CEEECCCCcCC-ccChHHhccccccccccCCccEEECCCCCCc-cchHHhhhccCCCcCEEEeC
Confidence 8 6777665 67777 78999999988 55554433 338999999999999 7888887 89999999999
Q ss_pred ccccccccCCCcCCCCCCCEEECCC------CcCCCcCcccccCCc-cceEeCCCCcCcCcccccccccccccccccCCC
Q 039533 472 GNLFQGPISSSLGSLRGLRVLDLSQ------NNLSGEIPKFLAGLS-LNNLNLSYNDLEGMVTTEGVFKNASATRILGNS 544 (949)
Q Consensus 472 ~N~l~~~~~~~~~~l~~L~~L~Ls~------N~l~~~~p~~~~~~~-L~~l~ls~N~l~~~~~~~~~~~~~~~~~~~gn~ 544 (949)
+|+|++ +|..+..+++|+.|+|++ |++.+.+|..+..++ |+.|+|++|++ +.+|.. .+..+..+.+.+|+
T Consensus 762 ~N~L~~-lp~~l~~L~~L~~L~Ls~N~~ls~N~l~~~ip~~l~~L~~L~~L~Ls~N~L-~~Ip~~-l~~~L~~LdLs~N~ 838 (876)
T 4ecn_A 762 YNCFSS-FPTQPLNSSQLKAFGIRHQRDAEGNRILRQWPTGITTCPSLIQLQIGSNDI-RKVDEK-LTPQLYILDIADNP 838 (876)
T ss_dssp SSCCSS-CCCGGGGCTTCCEEECCCCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSC-CCSSSCEEECCSCT
T ss_pred CCCCCc-cchhhhcCCCCCEEECCCCCCcccccccccChHHHhcCCCCCEEECCCCCC-CccCHh-hcCCCCEEECCCCC
Confidence 999997 788999999999999976 889999999998887 99999999999 666654 34678888999998
Q ss_pred CCC
Q 039533 545 KLC 547 (949)
Q Consensus 545 ~~c 547 (949)
...
T Consensus 839 l~~ 841 (876)
T 4ecn_A 839 NIS 841 (876)
T ss_dssp TCE
T ss_pred CCc
Confidence 654
No 29
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=7.4e-49 Score=430.90 Aligned_cols=275 Identities=23% Similarity=0.297 Sum_probs=215.1
Q ss_pred HHHhcCCCCCCeeeeecCceEEEEEEcCC-----CEEEEEEEEecCCC-cchHHHHHHHHHHHhcCC-CcceeEEeeeec
Q 039533 622 YNATSGFSSANLVGVGSFGSVYKGIIDEG-----RTTIAVKVFNLQHH-GASRSFIAECKALKSIRH-RNLVKVLTACLG 694 (949)
Q Consensus 622 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~-----~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h-~niv~~~~~~~~ 694 (949)
+...++|++.+.||+|+||+||+|++... ++.||||+++.... ...+.+.+|++++++++| ||||+++|+|..
T Consensus 60 Ei~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~g~~~~ 139 (353)
T 4ase_A 60 EFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTK 139 (353)
T ss_dssp BCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECC
T ss_pred EecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEEEEEEe
Confidence 34457899999999999999999998643 36899999975443 334679999999999965 899999999854
Q ss_pred ccccCCccceeEeeeccCCChhhhcCCCCCCC------ccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCC
Q 039533 695 ADYRGNDFKASVYEFMHYGSLEEWLHPFTGED------EIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLK 768 (949)
Q Consensus 695 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~------~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlk 768 (949)
.+ ...++|||||++|+|.++++...... ........+++.+++.|+.|||+||+|||++ +|||||||
T Consensus 140 ~~----~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~---~iiHRDLK 212 (353)
T 4ase_A 140 PG----GPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLA 212 (353)
T ss_dssp TT----SCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCS
T ss_pred cC----CEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhC---CeecCccC
Confidence 32 36799999999999999997422110 0011235689999999999999999999988 89999999
Q ss_pred CCCeeecCCCceEEeecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHh-CCCCCcccc
Q 039533 769 PSNVLLDDYMTARVGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVI-GKKPIDIMF 847 (949)
Q Consensus 769 p~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~ellt-g~~Pf~~~~ 847 (949)
|+|||+++++.+||+|||+|+....+..........||+.|||||++.+..|+.++|||||||++|||+| |+.||....
T Consensus 213 ~~NILl~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~ 292 (353)
T 4ase_A 213 ARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVK 292 (353)
T ss_dssp GGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCC
T ss_pred ccceeeCCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCCC
Confidence 9999999999999999999998766554444445669999999999999999999999999999999998 999996432
Q ss_pred ccCchhhhhccccCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHH
Q 039533 848 EGDINLHNFGRKALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHE 927 (949)
Q Consensus 848 ~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 927 (949)
... .+ ...+...... +.+..++.++.+++.+||+.||++||||+||++.
T Consensus 293 ~~~-~~------------~~~i~~g~~~------------------~~p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~ 341 (353)
T 4ase_A 293 IDE-EF------------CRRLKEGTRM------------------RAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 341 (353)
T ss_dssp CSH-HH------------HHHHHHTCCC------------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHH-HH------------HHHHHcCCCC------------------CCCccCCHHHHHHHHHHcCcChhHCcCHHHHHHH
Confidence 111 11 1111110000 0011335568899999999999999999999999
Q ss_pred HHHhHHh
Q 039533 928 LQSIKNI 934 (949)
Q Consensus 928 L~~i~~~ 934 (949)
|+++.++
T Consensus 342 L~~llq~ 348 (353)
T 4ase_A 342 LGNLLQA 348 (353)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9998765
No 30
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=1.5e-48 Score=468.82 Aligned_cols=434 Identities=20% Similarity=0.266 Sum_probs=371.2
Q ss_pred CCCceeeccCceeccccCCcccCcccCcEEeeccccc------cC------cCCCCCCCCccceeecCCCcccccccccc
Q 039533 89 SFLKQLYLQVNSFTHEIPSEIGGLRRLKVLALNNNSI------CG------EIPTNISRCSTLIPIHPQNNQLVGKILSR 156 (949)
Q Consensus 89 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l------~~------~~p~~~~~l~~L~~L~l~~n~l~~~~~~~ 156 (949)
.+++.|+|++|+++|.+|.+|++|++|++|+|++|.+ .| .+|... +..|+ +++++|.+.+.++..
T Consensus 81 ~~V~~L~L~~~~l~g~lp~~l~~L~~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~--~~~l~-l~l~~~~l~~~~~~~ 157 (636)
T 4eco_A 81 GRVTGLSLEGFGASGRVPDAIGQLTELEVLALGSHGEKVNERLFGPKGISANMSDEQ--KQKMR-MHYQKTFVDYDPRED 157 (636)
T ss_dssp CCEEEEECTTSCCEEEECGGGGGCTTCCEEESCCGGGGGTCCSBSTTSBCTTCCHHH--HHHHH-THHHHHHTCCCGGGG
T ss_pred CCEEEEEecCcccCCcCChHHhcCccceEEECcCCccccCCccccccccccCchHHH--HHHHH-hhHHHhhhccCchhh
Confidence 4688999999999999999999999999999999987 33 344433 56677 888889888888777
Q ss_pred ccCC-C------------------CCcEEECC--CCCCCCCCCCCcCCCCCccEEeccccccCCC---------------
Q 039533 157 FSSL-S------------------KTEILNLG--SNHLTGSIPSSLGNLSSIHTISLAYNNLDGT--------------- 200 (949)
Q Consensus 157 ~~~L-~------------------~L~~L~Ls--~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~--------------- 200 (949)
+..+ . .++.+.+. +|+++| +|..|+++++|++|+|++|+++|.
T Consensus 158 ~~~~~~~l~~~~l~~~~~~~~~~~~l~~l~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~ 236 (636)
T 4eco_A 158 FSDLIKDCINSDPQQKSIKKSSRITLKDTQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQ 236 (636)
T ss_dssp SCHHHHHHHHHCTTSCCCCCCCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHH
T ss_pred HHHHHHHHhhcCccccccccccccchhhhhhccccCCCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhc
Confidence 6622 1 12222222 689998 999999999999999999999986
Q ss_pred --CCCccc--CCCccccccccCcccccccccccCCCC-ChhhhccccccccccCC-CCCCCCCCcchhccccc------c
Q 039533 201 --IPNSFG--WFENLVFLSLAANNLSVVENKLTGEVP-SLEKLQRLQHFTITSNS-LGSGGNDDLSFLCSLTN------A 268 (949)
Q Consensus 201 --~p~~~~--~l~~L~~L~Ls~N~l~~~~~~l~~~~~-~l~~l~~L~~L~l~~N~-l~~~~~~~~~~~~~l~~------~ 268 (949)
+|..++ ++++|++|+|++|++. +.+| .+.++++|++|++++|+ ++. ...+..+.+ +
T Consensus 237 ~~ip~~l~~~~l~~L~~L~L~~n~l~-------~~~p~~l~~l~~L~~L~Ls~n~~l~~-----~~lp~~~~~L~~~~~l 304 (636)
T 4eco_A 237 QYKTEDLKWDNLKDLTDVEVYNCPNL-------TKLPTFLKALPEMQLINVACNRGISG-----EQLKDDWQALADAPVG 304 (636)
T ss_dssp HHTTSCCCGGGCTTCCEEEEECCTTC-------SSCCTTTTTCSSCCEEECTTCTTSCH-----HHHHHHHHHHHHSGGG
T ss_pred ccCchhhhhcccCCCCEEEecCCcCC-------ccChHHHhcCCCCCEEECcCCCCCcc-----ccchHHHHhhhccccC
Confidence 999999 9999999999998764 4555 48899999999999998 753 012334444 4
Q ss_pred CcccEEEccCCCCCccCCc--hhhcccccccEEEccCccccCCCCCCCCCCCcccEEEeecceecccCCCcccccCC-CC
Q 039533 269 TRLTWMHINSNNFGGLLPG--CISNLSKTIKTLFLNNNKIYGSIPAGIGNFVNLQRLDMWNNQLSGTIPPAIGELQN-LK 345 (949)
Q Consensus 269 ~~L~~L~L~~N~l~~~~p~--~~~~l~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~-L~ 345 (949)
++|++|++++|+++ .+|. .+..++ +|++|+|++|+++|.+| .++.+++|++|+|++|+++ .+|..+.++++ |+
T Consensus 305 ~~L~~L~L~~n~l~-~ip~~~~l~~l~-~L~~L~L~~N~l~g~ip-~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~~L~ 380 (636)
T 4eco_A 305 EKIQIIYIGYNNLK-TFPVETSLQKMK-KLGMLECLYNQLEGKLP-AFGSEIKLASLNLAYNQIT-EIPANFCGFTEQVE 380 (636)
T ss_dssp GTCCEEECCSSCCS-SCCCHHHHTTCT-TCCEEECCSCCCEEECC-CCEEEEEESEEECCSSEEE-ECCTTSEEECTTCC
T ss_pred CCCCEEECCCCcCC-ccCchhhhccCC-CCCEEeCcCCcCccchh-hhCCCCCCCEEECCCCccc-cccHhhhhhcccCc
Confidence 99999999999999 7888 888884 69999999999999999 9999999999999999999 88999999999 99
Q ss_pred EEecCCcccccccCccccccc--ccceeecccccccccCCCCCC-------CCCCCcEEEeeCccccCCCCCcccC-Ccc
Q 039533 346 ILGLNRNKLSGNIPPSIGNLK--MLLNLFLNDNFLEVSIPSSLG-------QCESLIEINLSNNNLSGTIPPQFFS-LSS 415 (949)
Q Consensus 346 ~L~Ls~N~l~~~~p~~~~~l~--~L~~L~L~~N~l~~~~p~~~~-------~l~~L~~L~l~~N~l~~~~p~~~~~-l~~ 415 (949)
.|+|++|+++ .+|..+..++ +|+.|++++|.+++.+|..|. .+++|++|+|++|+++ .+|..++. +++
T Consensus 381 ~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~~~l~~ 458 (636)
T 4eco_A 381 NLSFAHNKLK-YIPNIFDAKSVSVMSAIDFSYNEIGSVDGKNFDPLDPTPFKGINVSSINLSNNQIS-KFPKELFSTGSP 458 (636)
T ss_dssp EEECCSSCCS-SCCSCCCTTCSSCEEEEECCSSCTTTTTTCSSCTTCSSCCCCCCEEEEECCSSCCC-SCCTHHHHTTCC
T ss_pred EEEccCCcCc-ccchhhhhcccCccCEEECcCCcCCCcchhhhcccccccccCCCCCEEECcCCccC-cCCHHHHccCCC
Confidence 9999999999 7898888765 999999999999999999998 8889999999999999 67776654 788
Q ss_pred cceeeccCCCccCCCCcccc-ccc-------cccceeeeccccccccCCcccc--cccchhhcccCccccccccCCCcCC
Q 039533 416 LSISLDWSRNKLTGSLPIEV-GKL-------KILEFLYVYENRLEGEIPSTFG--NCIRLEQLGMGGNLFQGPISSSLGS 485 (949)
Q Consensus 416 l~~~L~ls~N~l~~~~p~~~-~~l-------~~L~~L~Ls~N~l~~~~p~~~~--~l~~L~~L~l~~N~l~~~~~~~~~~ 485 (949)
| +.|+|++|+++ .+|..+ ... ++|+.|+|++|+++ .+|..+. .+++|+.|+|++|+|++ +|..+..
T Consensus 459 L-~~L~Ls~N~l~-~i~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~-ip~~~~~ 534 (636)
T 4eco_A 459 L-SSINLMGNMLT-EIPKNSLKDENENFKNTYLLTSIDLRFNKLT-KLSDDFRATTLPYLVGIDLSYNSFSK-FPTQPLN 534 (636)
T ss_dssp C-SEEECCSSCCS-BCCSSSSEETTEECTTGGGCCEEECCSSCCC-BCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGG
T ss_pred C-CEEECCCCCCC-CcCHHHhccccccccccCCccEEECcCCcCC-ccChhhhhccCCCcCEEECCCCCCCC-cChhhhc
Confidence 8 79999999999 555543 333 39999999999999 7898887 99999999999999998 8999999
Q ss_pred CCCCCEEEC------CCCcCCCcCcccccCCc-cceEeCCCCcCcCcccccccccccccccccCCCCCCCCC
Q 039533 486 LRGLRVLDL------SQNNLSGEIPKFLAGLS-LNNLNLSYNDLEGMVTTEGVFKNASATRILGNSKLCGGI 550 (949)
Q Consensus 486 l~~L~~L~L------s~N~l~~~~p~~~~~~~-L~~l~ls~N~l~~~~~~~~~~~~~~~~~~~gn~~~c~~~ 550 (949)
+++|+.|+| ++|++.+.+|..+..++ |+.|+|++|++ +.+|.. .+..+..+.+.+|+..|-..
T Consensus 535 l~~L~~L~Ls~N~~ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l-~~ip~~-~~~~L~~L~Ls~N~l~~~~~ 604 (636)
T 4eco_A 535 SSTLKGFGIRNQRDAQGNRTLREWPEGITLCPSLTQLQIGSNDI-RKVNEK-ITPNISVLDIKDNPNISIDL 604 (636)
T ss_dssp CSSCCEEECCSCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSC-CCTTCCEEECCSCTTCEEEC
T ss_pred CCCCCEEECCCCcccccCcccccChHHHhcCCCCCEEECCCCcC-CccCHh-HhCcCCEEECcCCCCccccH
Confidence 999999999 56889999999998887 99999999999 555554 34778889999999887543
No 31
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=1.9e-47 Score=450.58 Aligned_cols=442 Identities=19% Similarity=0.173 Sum_probs=279.1
Q ss_pred EEEcCCCCCCccccCCCCCCCCCceeeccCceeccccCCcccCcccCcEEeeccccccCcCCCCCCCCccceeecCCCcc
Q 039533 69 LLDLRSLKLAGSVSHFIGNLSFLKQLYLQVNSFTHEIPSEIGGLRRLKVLALNNNSICGEIPTNISRCSTLIPIHPQNNQ 148 (949)
Q Consensus 69 ~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~ 148 (949)
.+|+++++++ .+|..+. ++|++|+|++|.+++..|..|.++++|++|+|++|++++..|..|+++++|++|++++|+
T Consensus 4 ~l~ls~n~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~ 80 (520)
T 2z7x_B 4 LVDRSKNGLI-HVPKDLS--QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNK 80 (520)
T ss_dssp EEECTTSCCS-SCCCSCC--TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSSC
T ss_pred eEecCCCCcc-ccccccc--ccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCCc
Confidence 5788888888 5666665 788888888888887767778888888888888888887778888888888888888888
Q ss_pred ccccccccccCCCCCcEEECCCCCCCC-CCCCCcCCCCCccEEeccccccCCCCCCcccCCCcc--ccccccCccc--cc
Q 039533 149 LVGKILSRFSSLSKTEILNLGSNHLTG-SIPSSLGNLSSIHTISLAYNNLDGTIPNSFGWFENL--VFLSLAANNL--SV 223 (949)
Q Consensus 149 l~~~~~~~~~~L~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L--~~L~Ls~N~l--~~ 223 (949)
|+.... . .+++|++|+|++|.+++ .+|..|+++++|++|+|++|++++ ..+..+++| ++|+|++|.+ ..
T Consensus 81 l~~lp~-~--~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~---~~~~~l~~L~L~~L~l~~n~l~~~~ 154 (520)
T 2z7x_B 81 LVKISC-H--PTVNLKHLDLSFNAFDALPICKEFGNMSQLKFLGLSTTHLEK---SSVLPIAHLNISKVLLVLGETYGEK 154 (520)
T ss_dssp CCEEEC-C--CCCCCSEEECCSSCCSSCCCCGGGGGCTTCCEEEEEESSCCG---GGGGGGTTSCEEEEEEEECTTTTSS
T ss_pred eeecCc-c--ccCCccEEeccCCccccccchhhhccCCcceEEEecCcccch---hhccccccceeeEEEeecccccccc
Confidence 875433 3 78888888888888886 467788888888888888888875 456667777 8888888876 21
Q ss_pred ccc------------------cccCCCC--ChhhhccccccccccCCCCCCCCCCcchhccccccCcccEEEccCCCCCc
Q 039533 224 VEN------------------KLTGEVP--SLEKLQRLQHFTITSNSLGSGGNDDLSFLCSLTNATRLTWMHINSNNFGG 283 (949)
Q Consensus 224 ~~~------------------~l~~~~~--~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~~~~L~~L~L~~N~l~~ 283 (949)
... .+.+.++ .+..+++|+.+++++|.-..........+..+..+++|+.|++++|.+++
T Consensus 155 ~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~l~~l~~L~~L~l~~~~l~~ 234 (520)
T 2z7x_B 155 EDPEGLQDFNTESLHIVFPTNKEFHFILDVSVKTVANLELSNIKCVLEDNKCSYFLSILAKLQTNPKLSNLTLNNIETTW 234 (520)
T ss_dssp CCTTTTTTCCEEEEEEECCSSSCCCCCCCCCCTTCSEEEECCEEECCSTTTTHHHHHHHHGGGGCTTCCEEEEEEEEEEH
T ss_pred cccccccccccceEEEEeccCcchhhhhhhhhhcccceeeccccccccccccceeecchhhhccccchhhccccccccCH
Confidence 111 0111111 13345556666666554110000000112245556666666666666554
Q ss_pred cCCchhhcc--cccccEEEccCccccCCCCCCC-----CCCCcccEEEeecceecccCC-Cccccc---CCCCEEecCCc
Q 039533 284 LLPGCISNL--SKTIKTLFLNNNKIYGSIPAGI-----GNFVNLQRLDMWNNQLSGTIP-PAIGEL---QNLKILGLNRN 352 (949)
Q Consensus 284 ~~p~~~~~l--~~~L~~L~L~~N~l~~~~~~~~-----~~l~~L~~L~L~~N~l~~~~p-~~~~~l---~~L~~L~Ls~N 352 (949)
..+..+... .++|++|++++|+++|.+|..+ +.+++|+.+++++|.+ .+| ..+..+ .+|+.|++++|
T Consensus 235 ~~~~~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~~~l~~L~~l~l~~n~~--~~p~~~~~~~~~~~~L~~L~l~~n 312 (520)
T 2z7x_B 235 NSFIRILQLVWHTTVWYFSISNVKLQGQLDFRDFDYSGTSLKALSIHQVVSDVF--GFPQSYIYEIFSNMNIKNFTVSGT 312 (520)
T ss_dssp HHHHHHHHHHHTSSCSEEEEEEEEEESCCCCCCCCCCSCCCCEEEEEEEEECCC--CSCTHHHHHHHHTCCCSEEEEESS
T ss_pred HHHHHHHHHhhhCcccEEEeecccccCccccchhhcccccCceeEeccccccce--ecchhhhhcccccCceeEEEcCCC
Confidence 322221110 1246666666666666666666 6666666666666666 344 334333 45666666666
Q ss_pred ccccccCcccccccccceeecccccccccCCCCCCCCCCCcEEEeeCccccC--CCCCcccCCcccceeeccCCCccCCC
Q 039533 353 KLSGNIPPSIGNLKMLLNLFLNDNFLEVSIPSSLGQCESLIEINLSNNNLSG--TIPPQFFSLSSLSISLDWSRNKLTGS 430 (949)
Q Consensus 353 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~--~~p~~~~~l~~l~~~L~ls~N~l~~~ 430 (949)
++.+.. .+..+++|++|++++|++++.+|..+..+++|++|++++|++++ .+|..+..+++| +.|++++|++++.
T Consensus 313 ~l~~~~--~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L-~~L~Ls~N~l~~~ 389 (520)
T 2z7x_B 313 RMVHML--CPSKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSL-QQLDISQNSVSYD 389 (520)
T ss_dssp CCCCCC--CCSSCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTC-CEEECCSSCCBCC
T ss_pred cccccc--chhhCCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCC-CEEECCCCcCCcc
Confidence 665321 12466666667777777666666666666677777777776664 444556666666 5667777776664
Q ss_pred Ccc-ccccccccceeeeccccccccCCcccccccchhhcccCccccccccCCCcCCCCCCCEEECCCCcCCCcCcccccC
Q 039533 431 LPI-EVGKLKILEFLYVYENRLEGEIPSTFGNCIRLEQLGMGGNLFQGPISSSLGSLRGLRVLDLSQNNLSGEIPKFLAG 509 (949)
Q Consensus 431 ~p~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 509 (949)
+|. .+..+++|+.|++++|++++.+|..+. ++|+.|+|++|+++ .+|..+..+++|+.|+|++|+|++..+..+..
T Consensus 390 l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~--~~L~~L~Ls~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~l~~~~~~~ 466 (520)
T 2z7x_B 390 EKKGDCSWTKSLLSLNMSSNILTDTIFRCLP--PRIKVLDLHSNKIK-SIPKQVVKLEALQELNVASNQLKSVPDGIFDR 466 (520)
T ss_dssp GGGCSCCCCTTCCEEECCSSCCCGGGGGSCC--TTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCCCCTTTTTT
T ss_pred cccchhccCccCCEEECcCCCCCcchhhhhc--ccCCEEECCCCccc-ccchhhhcCCCCCEEECCCCcCCccCHHHhcc
Confidence 444 356666677777777766666655553 56666677777666 55666666666777777777666333333554
Q ss_pred Cc-cceEeCCCCcCcCccc
Q 039533 510 LS-LNNLNLSYNDLEGMVT 527 (949)
Q Consensus 510 ~~-L~~l~ls~N~l~~~~~ 527 (949)
++ |++|++++|++++..+
T Consensus 467 l~~L~~L~l~~N~~~c~c~ 485 (520)
T 2z7x_B 467 LTSLQKIWLHTNPWDCSCP 485 (520)
T ss_dssp CTTCCEEECCSSCBCCCHH
T ss_pred CCcccEEECcCCCCcccCC
Confidence 44 6667777776666543
No 32
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=3.6e-48 Score=414.71 Aligned_cols=243 Identities=23% Similarity=0.246 Sum_probs=189.8
Q ss_pred cCCCCCCeeeeecCceEEEEEEc---CCCEEEEEEEEecCC--CcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCC
Q 039533 626 SGFSSANLVGVGSFGSVYKGIID---EGRTTIAVKVFNLQH--HGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGN 700 (949)
Q Consensus 626 ~~y~~~~~lg~G~~g~Vy~~~~~---~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 700 (949)
++|++.+.||+|+||+||+|++. .+++.||||+++... .....++.+|++++++++|||||++++++.+.+
T Consensus 24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~---- 99 (304)
T 3ubd_A 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEG---- 99 (304)
T ss_dssp GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETT----
T ss_pred cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECC----
Confidence 57999999999999999999884 357899999997442 223346889999999999999999999976544
Q ss_pred ccceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCce
Q 039533 701 DFKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTA 780 (949)
Q Consensus 701 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~ 780 (949)
..|+||||++||+|.+++. ....+++.++..++.|++.||+|||++ +|+||||||+|||++.++++
T Consensus 100 -~~~ivmEy~~gg~L~~~l~----------~~~~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~v 165 (304)
T 3ubd_A 100 -KLYLILDFLRGGDLFTRLS----------KEVMFTEEDVKFYLAELALALDHLHSL---GIIYRDLKPENILLDEEGHI 165 (304)
T ss_dssp -EEEEEECCCTTCEEHHHHH----------HHCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTSCE
T ss_pred -EEEEEEEcCCCCCHHHHHH----------hcCCCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHeEEcCCCCE
Confidence 7999999999999999996 235699999999999999999999988 99999999999999999999
Q ss_pred EEeecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhcccc
Q 039533 781 RVGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKA 860 (949)
Q Consensus 781 kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~ 860 (949)
||+|||+|+......... ....||+.|||||++.+..|+.++||||+||++|||+||+.||......+ ..
T Consensus 166 Kl~DFGla~~~~~~~~~~--~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~--~~------ 235 (304)
T 3ubd_A 166 KLTDFGLSKESIDHEKKA--YSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKE--TM------ 235 (304)
T ss_dssp EEESSEEEEC-----CCC--CSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH--HH------
T ss_pred EecccccceeccCCCccc--cccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCHHH--HH------
Confidence 999999998754433222 24569999999999999999999999999999999999999996432111 00
Q ss_pred CCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCH
Q 039533 861 LPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNM 921 (949)
Q Consensus 861 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~ 921 (949)
..+..... ..+ ...+..+.+++.+||+.||++|||+
T Consensus 236 -----~~i~~~~~-~~p-------------------~~~s~~~~~li~~~L~~dP~~R~ta 271 (304)
T 3ubd_A 236 -----TMILKAKL-GMP-------------------QFLSPEAQSLLRMLFKRNPANRLGA 271 (304)
T ss_dssp -----HHHHHCCC-CCC-------------------TTSCHHHHHHHHHHTCSSGGGSTTC
T ss_pred -----HHHHcCCC-CCC-------------------CcCCHHHHHHHHHHcccCHHHCCCC
Confidence 01111000 000 1234567899999999999999985
No 33
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=6.3e-47 Score=407.44 Aligned_cols=257 Identities=23% Similarity=0.347 Sum_probs=190.3
Q ss_pred cCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCC-cchHHHHHHHHHHHhcCCCcceeEEeeeecccc-------
Q 039533 626 SGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHH-GASRSFIAECKALKSIRHRNLVKVLTACLGADY------- 697 (949)
Q Consensus 626 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~------- 697 (949)
++|++.+.||+|+||+||+|++..+++.||||+++.... ...+++.+|++++++++|||||++++++...+.
T Consensus 5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~ 84 (299)
T 4g31_A 5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPS 84 (299)
T ss_dssp HHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC--------
T ss_pred hhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCcccccccc
Confidence 468899999999999999999999999999999975543 334678999999999999999999999865431
Q ss_pred cCCccceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCC
Q 039533 698 RGNDFKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDY 777 (949)
Q Consensus 698 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~ 777 (949)
......|+||||+++|+|.+++.... .....++..++.|+.||+.||+|||++ +|+||||||+|||++.+
T Consensus 85 ~~~~~l~ivmE~~~gg~L~~~l~~~~-------~~~~~~~~~~~~i~~qi~~al~ylH~~---~IiHRDlKp~NILl~~~ 154 (299)
T 4g31_A 85 SPKVYLYIQMQLCRKENLKDWMNGRC-------TIEERERSVCLHIFLQIAEAVEFLHSK---GLMHRDLKPSNIFFTMD 154 (299)
T ss_dssp --CEEEEEEEECCCSCCHHHHHHTCC-------SGGGSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTT
T ss_pred CCCcEEEEEEecCCCCcHHHHHHhcC-------CCChhHHHHHHHHHHHHHHHHHHHHHC---cCccccCcHHHeEECCC
Confidence 12234689999999999999997321 122356677899999999999999988 99999999999999999
Q ss_pred CceEEeecccceecCCCCCcc----------ccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCcccc
Q 039533 778 MTARVGDFGLARILSPDHTQT----------SSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMF 847 (949)
Q Consensus 778 ~~~kl~DfG~a~~~~~~~~~~----------~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~ 847 (949)
+.+||+|||+|+......... ......||+.|||||++.+..|+.++|||||||++|||++ ||....
T Consensus 155 ~~vKl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~ 231 (299)
T 4g31_A 155 DVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQM 231 (299)
T ss_dssp CCEEECCCCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHH
T ss_pred CcEEEccCccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCcc
Confidence 999999999998875543211 1123569999999999999999999999999999999996 774221
Q ss_pred ccCchhhhhccccCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 039533 848 EGDINLHNFGRKALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVH 926 (949)
Q Consensus 848 ~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 926 (949)
+.... +..+.+... .+...+..+...+++.+||+.||++|||+.|+++
T Consensus 232 ~~~~~------------~~~~~~~~~-------------------p~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 279 (299)
T 4g31_A 232 ERVRT------------LTDVRNLKF-------------------PPLFTQKYPCEYVMVQDMLSPSPMERPEAINIIE 279 (299)
T ss_dssp HHHHH------------HHHHHTTCC-------------------CHHHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred HHHHH------------HHHHhcCCC-------------------CCCCcccCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 10000 000000000 0112233445678999999999999999999876
No 34
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=1.3e-46 Score=443.49 Aligned_cols=432 Identities=20% Similarity=0.239 Sum_probs=348.2
Q ss_pred ceeeccCceeccccCCcccCcccCcEEeeccccccCcCCCCCCCCccceeecCCCccccccccccccCCCCCcEEECCCC
Q 039533 92 KQLYLQVNSFTHEIPSEIGGLRRLKVLALNNNSICGEIPTNISRCSTLIPIHPQNNQLVGKILSRFSSLSKTEILNLGSN 171 (949)
Q Consensus 92 ~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~L~~L~~L~Ls~N 171 (949)
++|++++|+++ .+|..+. ++|++|+|++|.+++..|..|.++++|++|++++|++++..|..|.++++|++|+|++|
T Consensus 3 ~~l~ls~n~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N 79 (520)
T 2z7x_B 3 FLVDRSKNGLI-HVPKDLS--QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHN 79 (520)
T ss_dssp CEEECTTSCCS-SCCCSCC--TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSS
T ss_pred ceEecCCCCcc-ccccccc--ccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCC
Confidence 57999999999 6888776 89999999999999877889999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCcCCCCCccEEeccccccCC-CCCCcccCCCccccccccCcccccccccccCCCCChhhhccc--ccccccc
Q 039533 172 HLTGSIPSSLGNLSSIHTISLAYNNLDG-TIPNSFGWFENLVFLSLAANNLSVVENKLTGEVPSLEKLQRL--QHFTITS 248 (949)
Q Consensus 172 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~~~~l~~~~~~l~~l~~L--~~L~l~~ 248 (949)
+|+ .+|.. .+++|++|+|++|++++ .+|..|+++++|++|+|++|.|+.. .+..+++| ++|++++
T Consensus 80 ~l~-~lp~~--~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~~---------~~~~l~~L~L~~L~l~~ 147 (520)
T 2z7x_B 80 KLV-KISCH--PTVNLKHLDLSFNAFDALPICKEFGNMSQLKFLGLSTTHLEKS---------SVLPIAHLNISKVLLVL 147 (520)
T ss_dssp CCC-EEECC--CCCCCSEEECCSSCCSSCCCCGGGGGCTTCCEEEEEESSCCGG---------GGGGGTTSCEEEEEEEE
T ss_pred cee-ecCcc--ccCCccEEeccCCccccccchhhhccCCcceEEEecCcccchh---------hccccccceeeEEEeec
Confidence 999 57766 89999999999999997 4789999999999999999998641 34556666 9999999
Q ss_pred CCC--CCCCCCCcchhc--------------------cccccCcccEEEccCCC-------CCccCCchhhcccccccEE
Q 039533 249 NSL--GSGGNDDLSFLC--------------------SLTNATRLTWMHINSNN-------FGGLLPGCISNLSKTIKTL 299 (949)
Q Consensus 249 N~l--~~~~~~~~~~~~--------------------~l~~~~~L~~L~L~~N~-------l~~~~p~~~~~l~~~L~~L 299 (949)
|.+ ....+..+..+. .+.++++|+.+++++|. +.+.+| .+..+ ++|+.|
T Consensus 148 n~l~~~~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~-~l~~l-~~L~~L 225 (520)
T 2z7x_B 148 GETYGEKEDPEGLQDFNTESLHIVFPTNKEFHFILDVSVKTVANLELSNIKCVLEDNKCSYFLSILA-KLQTN-PKLSNL 225 (520)
T ss_dssp CTTTTSSCCTTTTTTCCEEEEEEECCSSSCCCCCCCCCCTTCSEEEECCEEECCSTTTTHHHHHHHH-GGGGC-TTCCEE
T ss_pred ccccccccccccccccccceEEEEeccCcchhhhhhhhhhcccceeeccccccccccccceeecchh-hhccc-cchhhc
Confidence 998 443333222211 23345566666666665 444444 34444 346677
Q ss_pred EccCccccCCCCCCCC---CCCcccEEEeecceecccCCCcc-----cccCCCCEEecCCcccccccC-cccccc---cc
Q 039533 300 FLNNNKIYGSIPAGIG---NFVNLQRLDMWNNQLSGTIPPAI-----GELQNLKILGLNRNKLSGNIP-PSIGNL---KM 367 (949)
Q Consensus 300 ~L~~N~l~~~~~~~~~---~l~~L~~L~L~~N~l~~~~p~~~-----~~l~~L~~L~Ls~N~l~~~~p-~~~~~l---~~ 367 (949)
++++|.+++..+..+. ..++|++|++++|+++|.+|..+ +++++|+.+++++|.+ .+| ..+..+ .+
T Consensus 226 ~l~~~~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~~~l~~L~~l~l~~n~~--~~p~~~~~~~~~~~~ 303 (520)
T 2z7x_B 226 TLNNIETTWNSFIRILQLVWHTTVWYFSISNVKLQGQLDFRDFDYSGTSLKALSIHQVVSDVF--GFPQSYIYEIFSNMN 303 (520)
T ss_dssp EEEEEEEEHHHHHHHHHHHHTSSCSEEEEEEEEEESCCCCCCCCCCSCCCCEEEEEEEEECCC--CSCTHHHHHHHHTCC
T ss_pred cccccccCHHHHHHHHHHhhhCcccEEEeecccccCccccchhhcccccCceeEeccccccce--ecchhhhhcccccCc
Confidence 7766666543221111 13478888888888888888877 7888888888888888 445 455555 66
Q ss_pred cceeecccccccccCCCCCCCCCCCcEEEeeCccccCCCCCcccCCcccceeeccCCCccCC--CCccccccccccceee
Q 039533 368 LLNLFLNDNFLEVSIPSSLGQCESLIEINLSNNNLSGTIPPQFFSLSSLSISLDWSRNKLTG--SLPIEVGKLKILEFLY 445 (949)
Q Consensus 368 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~l~~~L~ls~N~l~~--~~p~~~~~l~~L~~L~ 445 (949)
|+.|++++|.+.... .+..+++|++|++++|++++.+|..+..+++| +.|++++|++++ .+|..++.+++|++|+
T Consensus 304 L~~L~l~~n~l~~~~--~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L-~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~ 380 (520)
T 2z7x_B 304 IKNFTVSGTRMVHML--CPSKISPFLHLDFSNNLLTDTVFENCGHLTEL-ETLILQMNQLKELSKIAEMTTQMKSLQQLD 380 (520)
T ss_dssp CSEEEEESSCCCCCC--CCSSCCCCCEEECCSSCCCTTTTTTCCCCSSC-CEEECCSSCCCBHHHHHHHHTTCTTCCEEE
T ss_pred eeEEEcCCCcccccc--chhhCCcccEEEeECCccChhhhhhhccCCCC-CEEEccCCccCccccchHHHhhCCCCCEEE
Confidence 888888888876322 23688999999999999999899999999999 899999999997 5678899999999999
Q ss_pred eccccccccCCc-ccccccchhhcccCccccccccCCCcCCCCCCCEEECCCCcCCCcCcccccCCc-cceEeCCCCcCc
Q 039533 446 VYENRLEGEIPS-TFGNCIRLEQLGMGGNLFQGPISSSLGSLRGLRVLDLSQNNLSGEIPKFLAGLS-LNNLNLSYNDLE 523 (949)
Q Consensus 446 Ls~N~l~~~~p~-~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~-L~~l~ls~N~l~ 523 (949)
+++|++++.+|. .+..+++|+.|++++|++++.+|..+. ++|+.|+|++|+|+ .+|..+..++ |+.|++++|+++
T Consensus 381 Ls~N~l~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~--~~L~~L~Ls~N~l~-~ip~~~~~l~~L~~L~L~~N~l~ 457 (520)
T 2z7x_B 381 ISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFRCLP--PRIKVLDLHSNKIK-SIPKQVVKLEALQELNVASNQLK 457 (520)
T ss_dssp CCSSCCBCCGGGCSCCCCTTCCEEECCSSCCCGGGGGSCC--TTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCC
T ss_pred CCCCcCCcccccchhccCccCCEEECcCCCCCcchhhhhc--ccCCEEECCCCccc-ccchhhhcCCCCCEEECCCCcCC
Confidence 999999985665 488999999999999999998888775 79999999999999 6776655665 999999999999
Q ss_pred Ccccc-cccccccccccccCCCCCCC
Q 039533 524 GMVTT-EGVFKNASATRILGNSKLCG 548 (949)
Q Consensus 524 ~~~~~-~~~~~~~~~~~~~gn~~~c~ 548 (949)
+.++. ...+..+..+.+.+|++.|.
T Consensus 458 ~l~~~~~~~l~~L~~L~l~~N~~~c~ 483 (520)
T 2z7x_B 458 SVPDGIFDRLTSLQKIWLHTNPWDCS 483 (520)
T ss_dssp CCCTTTTTTCTTCCEEECCSSCBCCC
T ss_pred ccCHHHhccCCcccEEECcCCCCccc
Confidence 76554 45567788899999999884
No 35
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=100.00 E-value=4.5e-45 Score=441.79 Aligned_cols=499 Identities=21% Similarity=0.169 Sum_probs=322.7
Q ss_pred CCCCccCccCCC----Ccceee----eeEEeCCC---------CcEEEEEcCCCCCCccccCCCCCCCCCceeeccCcee
Q 039533 39 PVGVLGTWNESI----HFCKWY----GVTCSRRH---------QRVTLLDLRSLKLAGSVSHFIGNLSFLKQLYLQVNSF 101 (949)
Q Consensus 39 ~~~~l~sW~~~~----~~C~w~----gv~C~~~~---------~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~l 101 (949)
+...+++|+.+. ++|.|. .|.|.... ..++.|||++|+|++..+.+|.++++|++|+|++|+|
T Consensus 9 ~~~~~~~~~~~~p~~~~~c~~~~~~~~~~c~~~~l~~vP~~lp~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i 88 (635)
T 4g8a_A 9 DDDKLAAANSSIPESWEPCVEVVPNITYQCMELNFYKIPDNLPFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEI 88 (635)
T ss_dssp ----------------CCSEEEETTTEEECTTSCCSSCCSSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCC
T ss_pred CcchhhcccCCCCCCCCCccccCCCCEEECCCCCcCccCCCCCcCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcC
Confidence 344566665432 345554 35676431 3577888888888876667788888888888888888
Q ss_pred ccccCCcccCcccCcEEeeccccccCcCCCCCCCCccceeecCCCccccccccccccCCCCCcEEECCCCCCCC-CCCCC
Q 039533 102 THEIPSEIGGLRRLKVLALNNNSICGEIPTNISRCSTLIPIHPQNNQLVGKILSRFSSLSKTEILNLGSNHLTG-SIPSS 180 (949)
Q Consensus 102 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~L~~L~~L~Ls~N~l~~-~~p~~ 180 (949)
++..|.+|++|++|++|+|++|+|++..|..|+++++|++|++++|++++..+..|+++++|++|+|++|.+++ .+|..
T Consensus 89 ~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~Ls~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~ 168 (635)
T 4g8a_A 89 QTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEY 168 (635)
T ss_dssp CEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGG
T ss_pred CCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEECCCCcCCCCChhhhhcCcccCeeccccCccccCCCchh
Confidence 87777778888888888888888886555678888888888888888888777788888888888888888875 35677
Q ss_pred cCCCCCccEEeccccccCCCCCCcccCCCccc----cccccCcccccccccccCCCC-----------C-------hhhh
Q 039533 181 LGNLSSIHTISLAYNNLDGTIPNSFGWFENLV----FLSLAANNLSVVENKLTGEVP-----------S-------LEKL 238 (949)
Q Consensus 181 ~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~----~L~Ls~N~l~~~~~~l~~~~~-----------~-------l~~l 238 (949)
++.+++|++|+|++|+|++..|..|..+.+++ .++++.|.++.++........ . +..+
T Consensus 169 ~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~l~~~~~~~~ls~n~l~~i~~~~~~~~~~~~l~l~~n~~~~~~~~~~~~~l 248 (635)
T 4g8a_A 169 FSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEIRLHKLTLRNNFDSLNVMKTCIQGL 248 (635)
T ss_dssp GGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCCEEECTTCCCCEECTTTTTTCEEEEEEEESCCSSHHHHHHHHHTT
T ss_pred hccchhhhhhcccCccccccccccccchhhhhhhhhhhhcccCcccccCcccccchhhhhhhhhcccccccccchhhcCC
Confidence 77888888888888888877777776665544 466777777655432221110 0 1112
Q ss_pred ccccccccccCCC------CCCCCCCc---------------------chhccccccCcccEEEccCCCCCccCCchhhc
Q 039533 239 QRLQHFTITSNSL------GSGGNDDL---------------------SFLCSLTNATRLTWMHINSNNFGGLLPGCISN 291 (949)
Q Consensus 239 ~~L~~L~l~~N~l------~~~~~~~~---------------------~~~~~l~~~~~L~~L~L~~N~l~~~~p~~~~~ 291 (949)
..++...+..+.. .......+ .....+.....++.+++.+|.+....+ +..
T Consensus 249 ~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~--~~~ 326 (635)
T 4g8a_A 249 AGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDGIIDLFNCLTNVSSFSLVSVTIERVKD--FSY 326 (635)
T ss_dssp TTCEEEEEEEECCTTSCCCSCCCTTTTGGGGGSEEEEEEEECCCSCEEECTTTTGGGTTCSEEEEESCEEEECGG--GGS
T ss_pred cccccccccccccccccccccccccccccccchhhhhhhhhhhcccccchhhhhhhhcccccccccccccccccc--ccc
Confidence 2222222111110 00000000 011123345567777777777665432 222
Q ss_pred ccccccEEEccCccccCCCCCCCCCCCcccEEEeecceecccCCCcccccCCCCEEecCCccccc--ccCcccccccccc
Q 039533 292 LSKTIKTLFLNNNKIYGSIPAGIGNFVNLQRLDMWNNQLSGTIPPAIGELQNLKILGLNRNKLSG--NIPPSIGNLKMLL 369 (949)
Q Consensus 292 l~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~ 369 (949)
. ..++.|++.+|++.+..+. .+..|+.+++++|.+... .....+++|+.|++++|.+.. ..+..+..+.+|+
T Consensus 327 ~-~~L~~L~l~~~~~~~~~~~---~l~~L~~l~l~~n~~~~~--~~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~ 400 (635)
T 4g8a_A 327 N-FGWQHLELVNCKFGQFPTL---KLKSLKRLTFTSNKGGNA--FSEVDLPSLEFLDLSRNGLSFKGCCSQSDFGTISLK 400 (635)
T ss_dssp C-CCCSEEEEESCEESSCCCC---BCTTCCEEEEESCCSCCB--CCCCBCTTCCEEECCSSCCBEEEECCHHHHSCSCCC
T ss_pred c-hhhhhhhcccccccCcCcc---cchhhhhcccccccCCCC--cccccccccccchhhccccccccccccchhhhhhhh
Confidence 2 3578888888887754432 345677777777776632 234467777778887777753 3455666777777
Q ss_pred eeecccccccccCCCCCCCCCCCcEEEeeCccccCCCCC-cccCCcccceeeccCCCccCCCCccccccccccceeeecc
Q 039533 370 NLFLNDNFLEVSIPSSLGQCESLIEINLSNNNLSGTIPP-QFFSLSSLSISLDWSRNKLTGSLPIEVGKLKILEFLYVYE 448 (949)
Q Consensus 370 ~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~-~~~~l~~l~~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 448 (949)
.|++..|.+.. .+..+..+++|+.+++++|+.....+. .+..+..+ ..+++++|.+++..|..+..++.|+.|+|++
T Consensus 401 ~L~~~~~~~~~-~~~~~~~l~~L~~l~l~~~~~~~~~~~~~~~~l~~l-~~l~ls~n~l~~~~~~~~~~~~~L~~L~Ls~ 478 (635)
T 4g8a_A 401 YLDLSFNGVIT-MSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNL-IYLDISHTHTRVAFNGIFNGLSSLEVLKMAG 478 (635)
T ss_dssp EEECCSCSEEE-ECSCCTTCTTCCEEECTTSEEESTTSSCTTTTCTTC-CEEECTTSCCEECCTTTTTTCTTCCEEECTT
T ss_pred hhhcccccccc-ccccccccccccchhhhhcccccccccccccccccc-ccccccccccccccccccccchhhhhhhhhh
Confidence 77777777663 455566777777777777776655443 34455666 6777777777777777777777777777777
Q ss_pred ccc-cccCCcccccccchhhcccCccccccccCCCcCCCCCCCEEECCCCcCCCcCcccccCCc-cceEeCCCCcCcCcc
Q 039533 449 NRL-EGEIPSTFGNCIRLEQLGMGGNLFQGPISSSLGSLRGLRVLDLSQNNLSGEIPKFLAGLS-LNNLNLSYNDLEGMV 526 (949)
Q Consensus 449 N~l-~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~-L~~l~ls~N~l~~~~ 526 (949)
|++ .+..|..|..+++|+.|+|++|+|++.+|..|.++++|++|+|++|+|++.+|..+..++ |+.|+|++|+|++.+
T Consensus 479 N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~ 558 (635)
T 4g8a_A 479 NSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSK 558 (635)
T ss_dssp CEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCBCCCGGGTTCTTCCEEECTTSCCCBCC
T ss_pred cccccccCchhhhhccccCEEECCCCccCCcChHHHcCCCCCCEEECCCCcCCCCChhHHhCCCCCCEEECCCCcCCCCC
Confidence 764 345667777777777777777777777777777777777777777777777777776665 777777777777776
Q ss_pred ccc-ccc-cccccccccCCCCCC
Q 039533 527 TTE-GVF-KNASATRILGNSKLC 547 (949)
Q Consensus 527 ~~~-~~~-~~~~~~~~~gn~~~c 547 (949)
|.. ..+ .++..+.+.+||+.|
T Consensus 559 ~~~l~~l~~~L~~L~L~~Np~~C 581 (635)
T 4g8a_A 559 KQELQHFPSSLAFLNLTQNDFAC 581 (635)
T ss_dssp SSCTTCCCTTCCEEECTTCCBCC
T ss_pred HHHHHhhhCcCCEEEeeCCCCcc
Confidence 653 222 456667777777777
No 36
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.1e-45 Score=413.00 Aligned_cols=285 Identities=19% Similarity=0.194 Sum_probs=203.7
Q ss_pred cCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCC--cchHHHHHHHHHHHhcCCCcceeEEeeeecc-cccCCcc
Q 039533 626 SGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHH--GASRSFIAECKALKSIRHRNLVKVLTACLGA-DYRGNDF 702 (949)
Q Consensus 626 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~-~~~~~~~ 702 (949)
++|++.+.||+|+||+||+|++..+|+.||||+++.... ...+++.+|+++|++++|||||++++++... .+.....
T Consensus 54 ~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~ 133 (398)
T 4b99_A 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKS 133 (398)
T ss_dssp SSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCC
T ss_pred CCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCE
Confidence 579999999999999999999999999999999975432 2346788999999999999999999997653 2345567
Q ss_pred ceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEE
Q 039533 703 KASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARV 782 (949)
Q Consensus 703 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl 782 (949)
.|+||||++ |+|.+++. ....+++.++..|+.||+.||+|||++ +||||||||+|||++.++.+||
T Consensus 134 ~~ivmE~~~-g~L~~~i~----------~~~~l~~~~~~~~~~qil~al~ylH~~---~iiHRDlKP~NIl~~~~~~~Ki 199 (398)
T 4b99_A 134 VYVVLDLME-SDLHQIIH----------SSQPLTLEHVRYFLYQLLRGLKYMHSA---QVIHRDLKPSNLLVNENCELKI 199 (398)
T ss_dssp EEEEEECCS-EEHHHHHT----------SSSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEE
T ss_pred EEEEEeCCC-CCHHHHHH----------hcCCCCHHHHHHHHHHHHHHHHHHHHC---cCcCCCcCccccccCCCCCEEE
Confidence 899999996 68999996 345699999999999999999999988 9999999999999999999999
Q ss_pred eecccceecCCCCC--ccccccccCccCccCccccCCC-ccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhccc
Q 039533 783 GDFGLARILSPDHT--QTSSFSVKGSLGYIAPEYGVGC-EVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRK 859 (949)
Q Consensus 783 ~DfG~a~~~~~~~~--~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~ 859 (949)
+|||+|+.+..... ........||+.|||||++.+. .++.++||||+||++|||++|++||......+. +......
T Consensus 200 ~DFGla~~~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~~-l~~I~~~ 278 (398)
T 4b99_A 200 GDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQ-LQLIMMV 278 (398)
T ss_dssp CCCTTCBCC-------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHH-HHHHHHH
T ss_pred eecceeeecccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHHHH-HHHHHHh
Confidence 99999987644322 1222346799999999998875 468999999999999999999999964322110 1000000
Q ss_pred cCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 039533 860 ALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVH 926 (949)
Q Consensus 860 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 926 (949)
..... .+.............+.......+.............+.+++.+|++.||++|||++|+++
T Consensus 279 ~g~p~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~ 344 (398)
T 4b99_A 279 LGTPS-PAVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALR 344 (398)
T ss_dssp HCCCC-GGGTC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred cCCCC-hHHhhhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhc
Confidence 00000 0000000000000000000000000000000122456789999999999999999999876
No 37
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=100.00 E-value=3.7e-43 Score=425.06 Aligned_cols=469 Identities=21% Similarity=0.194 Sum_probs=369.1
Q ss_pred eeeeEEeCCCCcEEEEEcCCCCCCccccCCCCCCCCCceeeccCceeccccCCcccCcccCcEEeeccccccCcCCCCCC
Q 039533 55 WYGVTCSRRHQRVTLLDLRSLKLAGSVSHFIGNLSFLKQLYLQVNSFTHEIPSEIGGLRRLKVLALNNNSICGEIPTNIS 134 (949)
Q Consensus 55 w~gv~C~~~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 134 (949)
|..-.|.... +..|-++.+|+ .+|+.+. +++++|||++|+|++..|.+|.++++|++|||++|+|++..|..|+
T Consensus 24 ~~~c~~~~~~---~~~~c~~~~l~-~vP~~lp--~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~ 97 (635)
T 4g8a_A 24 WEPCVEVVPN---ITYQCMELNFY-KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQ 97 (635)
T ss_dssp -CCSEEEETT---TEEECTTSCCS-SCCSSSC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTT
T ss_pred CCCccccCCC---CEEECCCCCcC-ccCCCCC--cCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhc
Confidence 6655555432 23577777887 6776553 5799999999999987788999999999999999999977778899
Q ss_pred CCccceeecCCCccccccccccccCCCCCcEEECCCCCCCCCCCCCcCCCCCccEEeccccccCC-CCCCcccCCCcccc
Q 039533 135 RCSTLIPIHPQNNQLVGKILSRFSSLSKTEILNLGSNHLTGSIPSSLGNLSSIHTISLAYNNLDG-TIPNSFGWFENLVF 213 (949)
Q Consensus 135 ~l~~L~~L~l~~n~l~~~~~~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~-~~p~~~~~l~~L~~ 213 (949)
+|++|++|+|++|+|++..+..|.+|++|++|+|++|+|++..+..|+++++|++|+|++|++++ ..|..++.+++|++
T Consensus 98 ~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~Ls~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~ 177 (635)
T 4g8a_A 98 SLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEH 177 (635)
T ss_dssp TCTTCCEEECTTCCCCEECGGGGTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCE
T ss_pred CCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEECCCCcCCCCChhhhhcCcccCeeccccCccccCCCchhhccchhhhh
Confidence 99999999999999999999999999999999999999998777889999999999999999986 46888999999999
Q ss_pred ccccCcccccccccccCCCCChhhhcccc----ccccccCCCCCCCCCCcchh------------------ccccccCcc
Q 039533 214 LSLAANNLSVVENKLTGEVPSLEKLQRLQ----HFTITSNSLGSGGNDDLSFL------------------CSLTNATRL 271 (949)
Q Consensus 214 L~Ls~N~l~~~~~~l~~~~~~l~~l~~L~----~L~l~~N~l~~~~~~~~~~~------------------~~l~~~~~L 271 (949)
|+|++|+|+.+... .+..+.+++ .++++.|.++......+... ..+..+..+
T Consensus 178 L~L~~N~l~~~~~~------~l~~L~~l~~~~~~~~ls~n~l~~i~~~~~~~~~~~~l~l~~n~~~~~~~~~~~~~l~~l 251 (635)
T 4g8a_A 178 LDLSSNKIQSIYCT------DLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEIRLHKLTLRNNFDSLNVMKTCIQGLAGL 251 (635)
T ss_dssp EECCSSCCCEECGG------GGHHHHTCTTCCCEEECTTCCCCEECTTTTTTCEEEEEEEESCCSSHHHHHHHHHTTTTC
T ss_pred hcccCccccccccc------cccchhhhhhhhhhhhcccCcccccCcccccchhhhhhhhhcccccccccchhhcCCccc
Confidence 99999999876532 234444333 46677777654432211100 011122222
Q ss_pred cEEEccC------------------------------CCCCc---cCCchhhcccccccEEEccCccccCCCCCCCCCCC
Q 039533 272 TWMHINS------------------------------NNFGG---LLPGCISNLSKTIKTLFLNNNKIYGSIPAGIGNFV 318 (949)
Q Consensus 272 ~~L~L~~------------------------------N~l~~---~~p~~~~~l~~~L~~L~L~~N~l~~~~~~~~~~l~ 318 (949)
+...+.. +.... ..+..+.. ..+++.+.+.+|.+.... .+....
T Consensus 252 ~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~-~~~l~~l~~~~~~~~~~~--~~~~~~ 328 (635)
T 4g8a_A 252 EVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDGIIDLFNC-LTNVSSFSLVSVTIERVK--DFSYNF 328 (635)
T ss_dssp EEEEEEEECCTTSCCCSCCCTTTTGGGGGSEEEEEEEECCCSCEEECTTTTGG-GTTCSEEEEESCEEEECG--GGGSCC
T ss_pred ccccccccccccccccccccccccccccchhhhhhhhhhhcccccchhhhhhh-hccccccccccccccccc--ccccch
Confidence 2222211 11100 01111222 246888999999887543 356678
Q ss_pred cccEEEeecceecccCCCcccccCCCCEEecCCcccccccCcccccccccceeecccccccc--cCCCCCCCCCCCcEEE
Q 039533 319 NLQRLDMWNNQLSGTIPPAIGELQNLKILGLNRNKLSGNIPPSIGNLKMLLNLFLNDNFLEV--SIPSSLGQCESLIEIN 396 (949)
Q Consensus 319 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~--~~p~~~~~l~~L~~L~ 396 (949)
+|+.|++++|.+.+..+. .+..|+.+++++|.+.... ...++++|+.|++++|.+.. ..+..+..+.+|+.|+
T Consensus 329 ~L~~L~l~~~~~~~~~~~---~l~~L~~l~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~ 403 (635)
T 4g8a_A 329 GWQHLELVNCKFGQFPTL---KLKSLKRLTFTSNKGGNAF--SEVDLPSLEFLDLSRNGLSFKGCCSQSDFGTISLKYLD 403 (635)
T ss_dssp CCSEEEEESCEESSCCCC---BCTTCCEEEEESCCSCCBC--CCCBCTTCCEEECCSSCCBEEEECCHHHHSCSCCCEEE
T ss_pred hhhhhhcccccccCcCcc---cchhhhhcccccccCCCCc--ccccccccccchhhccccccccccccchhhhhhhhhhh
Confidence 999999999999865443 4678999999999987433 35689999999999999864 3556667789999999
Q ss_pred eeCccccCCCCCcccCCcccceeeccCCCccCCCCc-cccccccccceeeeccccccccCCcccccccchhhcccCcccc
Q 039533 397 LSNNNLSGTIPPQFFSLSSLSISLDWSRNKLTGSLP-IEVGKLKILEFLYVYENRLEGEIPSTFGNCIRLEQLGMGGNLF 475 (949)
Q Consensus 397 l~~N~l~~~~p~~~~~l~~l~~~L~ls~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l 475 (949)
++.|.+. .++..+..+.++ +.+++++|+.....+ ..+..+++++.++++.|.+.+..|..+..+++|+.|+|++|++
T Consensus 404 ~~~~~~~-~~~~~~~~l~~L-~~l~l~~~~~~~~~~~~~~~~l~~l~~l~ls~n~l~~~~~~~~~~~~~L~~L~Ls~N~~ 481 (635)
T 4g8a_A 404 LSFNGVI-TMSSNFLGLEQL-EHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSF 481 (635)
T ss_dssp CCSCSEE-EECSCCTTCTTC-CEEECTTSEEESTTSSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEE
T ss_pred ccccccc-cccccccccccc-cchhhhhccccccccccccccccccccccccccccccccccccccchhhhhhhhhhccc
Confidence 9999998 567788899999 789999988776554 5688999999999999999999999999999999999999985
Q ss_pred -ccccCCCcCCCCCCCEEECCCCcCCCcCcccccCCc-cceEeCCCCcCcCccccc-ccccccccccccCCCC
Q 039533 476 -QGPISSSLGSLRGLRVLDLSQNNLSGEIPKFLAGLS-LNNLNLSYNDLEGMVTTE-GVFKNASATRILGNSK 545 (949)
Q Consensus 476 -~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~-L~~l~ls~N~l~~~~~~~-~~~~~~~~~~~~gn~~ 545 (949)
.+.+|..|..+++|++|||++|+|++.+|..+..++ |++|+|++|+|++.+|.. ..+..+..+.+.+|.-
T Consensus 482 ~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l 554 (635)
T 4g8a_A 482 QENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHI 554 (635)
T ss_dssp GGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCBCCCGGGTTCTTCCEEECTTSCC
T ss_pred ccccCchhhhhccccCEEECCCCccCCcChHHHcCCCCCCEEECCCCcCCCCChhHHhCCCCCCEEECCCCcC
Confidence 556889999999999999999999999999999887 999999999999987753 4566778888888864
No 38
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00 E-value=9e-46 Score=439.60 Aligned_cols=446 Identities=19% Similarity=0.205 Sum_probs=371.0
Q ss_pred CcEEEEEcCCCCCCccccCCCCCCCCCceeeccCceeccccCCcccCcccCcEEeeccccccC-cCCCCCCCCccceeec
Q 039533 65 QRVTLLDLRSLKLAGSVSHFIGNLSFLKQLYLQVNSFTHEIPSEIGGLRRLKVLALNNNSICG-EIPTNISRCSTLIPIH 143 (949)
Q Consensus 65 ~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~ 143 (949)
.+++.|+|++|++++..+.+++++++|++|+|++|.+++..|..|+++++|++|+|++|.+++ .+|..++++++|++|+
T Consensus 50 ~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~ 129 (549)
T 2z81_A 50 ANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLR 129 (549)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEE
T ss_pred CcccEEECCCCCcCccChhhccccccCCEEECCCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEE
Confidence 478999999999999888999999999999999999998888789999999999999999987 4688999999999999
Q ss_pred CCCccc-cccccccccCCCCCcEEECCCCCCCCCCCCCcCCCCCccEEeccccccCCCCCCc-ccCCCccccccccCccc
Q 039533 144 PQNNQL-VGKILSRFSSLSKTEILNLGSNHLTGSIPSSLGNLSSIHTISLAYNNLDGTIPNS-FGWFENLVFLSLAANNL 221 (949)
Q Consensus 144 l~~n~l-~~~~~~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~-~~~l~~L~~L~Ls~N~l 221 (949)
+++|.+ ....+..|.++++|++|+|++|.+++..|..++++++|++|++++|.+. .+|.. ++.+++|++|++++|++
T Consensus 130 L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~~~-~~~~~~~~~l~~L~~L~L~~n~l 208 (549)
T 2z81_A 130 IGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQSLKSIRDIHHLTLHLSESA-FLLEIFADILSSVRYLELRDTNL 208 (549)
T ss_dssp EEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSBST-THHHHHHHSTTTBSEEEEESCBC
T ss_pred CCCCccccccCHhhhhcccccCeeeccCCcccccChhhhhccccCceEecccCccc-ccchhhHhhcccccEEEccCCcc
Confidence 999994 4455578999999999999999999999999999999999999999987 44544 46799999999999998
Q ss_pred ccccccccCCCCChhhhccccccccccCCCCCCCCCCcchhccccccCcccEEEccCCCCCccCC------chhhccccc
Q 039533 222 SVVENKLTGEVPSLEKLQRLQHFTITSNSLGSGGNDDLSFLCSLTNATRLTWMHINSNNFGGLLP------GCISNLSKT 295 (949)
Q Consensus 222 ~~~~~~l~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~~~~L~~L~L~~N~l~~~~p------~~~~~l~~~ 295 (949)
+.++. ...+....+++|++|++++|.++..... .+...+..+++|+.+++++|.+.+... ..+..+ .+
T Consensus 209 ~~~~~---~~~~~~~~~~~L~~L~l~~n~l~~~~~~--~l~~~~~~~~~L~~l~l~~~~~~~~~~~~~~~~~~~~~l-~~ 282 (549)
T 2z81_A 209 ARFQF---SPLPVDEVSSPMKKLAFRGSVLTDESFN--ELLKLLRYILELSEVEFDDCTLNGLGDFNPSESDVVSEL-GK 282 (549)
T ss_dssp TTCCC---CCCSSCCCCCCCCEEEEESCEEEHHHHH--HHHGGGGGCTTCCEEEEESCEEECCSCCCCCTTTCCCCC-TT
T ss_pred ccccc---cccchhhhhhcccceeccccccchhHHH--HHHHHhhhhccccccccccccccccccccccchhhhhhh-cc
Confidence 75431 1222334567899999999987643221 123345677899999999998876421 122333 46
Q ss_pred ccEEEccCccccCCC-----CCCCCCCCcccEEEeecceecccCCCcc-cccCCCCEEecCCcccccccC---ccccccc
Q 039533 296 IKTLFLNNNKIYGSI-----PAGIGNFVNLQRLDMWNNQLSGTIPPAI-GELQNLKILGLNRNKLSGNIP---PSIGNLK 366 (949)
Q Consensus 296 L~~L~L~~N~l~~~~-----~~~~~~l~~L~~L~L~~N~l~~~~p~~~-~~l~~L~~L~Ls~N~l~~~~p---~~~~~l~ 366 (949)
++.|++.++.+.... +..+..+++|++|++++|.++ .+|..+ .++++|++|+|++|++++.+| ..++.++
T Consensus 283 L~~L~l~~~~i~~~~~~~~l~~~~~~~~~L~~L~l~~n~l~-~ip~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l~ 361 (549)
T 2z81_A 283 VETVTIRRLHIPQFYLFYDLSTVYSLLEKVKRITVENSKVF-LVPCSFSQHLKSLEFLDLSENLMVEEYLKNSACKGAWP 361 (549)
T ss_dssp CCEEEEESCBCSCGGGSCCCCHHHHHSTTCCEEEEESSCCC-CCCHHHHHHCTTCCEEECCSSCCCHHHHHHHTCTTSST
T ss_pred cccccccccccchhhhcccchhhhhhcccceEEEeccCccc-cCCHHHHhcCccccEEEccCCccccccccchhhhhccc
Confidence 899999999876421 111234568999999999998 677665 579999999999999998775 3478899
Q ss_pred ccceeecccccccccCC--CCCCCCCCCcEEEeeCccccCCCCCcccCCcccceeeccCCCccCCCCcccccccccccee
Q 039533 367 MLLNLFLNDNFLEVSIP--SSLGQCESLIEINLSNNNLSGTIPPQFFSLSSLSISLDWSRNKLTGSLPIEVGKLKILEFL 444 (949)
Q Consensus 367 ~L~~L~L~~N~l~~~~p--~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~l~~~L~ls~N~l~~~~p~~~~~l~~L~~L 444 (949)
+|++|+|++|++++..+ ..+..+++|++|++++|+++ .+|..+..+++| +.|++++|+++ .+|..+ .++|++|
T Consensus 362 ~L~~L~Ls~N~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~~L-~~L~Ls~N~l~-~l~~~~--~~~L~~L 436 (549)
T 2z81_A 362 SLQTLVLSQNHLRSMQKTGEILLTLKNLTSLDISRNTFH-PMPDSCQWPEKM-RFLNLSSTGIR-VVKTCI--PQTLEVL 436 (549)
T ss_dssp TCCEEECTTSCCCCHHHHHHHGGGCTTCCEEECTTCCCC-CCCSCCCCCTTC-CEEECTTSCCS-CCCTTS--CTTCSEE
T ss_pred cCcEEEccCCcccccccchhhhhcCCCCCEEECCCCCCc-cCChhhcccccc-cEEECCCCCcc-cccchh--cCCceEE
Confidence 99999999999986543 46889999999999999999 799999999999 89999999998 455444 3689999
Q ss_pred eeccccccccCCcccccccchhhcccCccccccccCCCcCCCCCCCEEECCCCcCCCcCcccccCCc-cceEeCCCCcCc
Q 039533 445 YVYENRLEGEIPSTFGNCIRLEQLGMGGNLFQGPISSSLGSLRGLRVLDLSQNNLSGEIPKFLAGLS-LNNLNLSYNDLE 523 (949)
Q Consensus 445 ~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~-L~~l~ls~N~l~ 523 (949)
+|++|+|++.+ ..+++|+.|+|++|+|+ .+|. ...+++|+.|||++|+|++.+|..+..++ |+.|++++|++.
T Consensus 437 ~Ls~N~l~~~~----~~l~~L~~L~Ls~N~l~-~ip~-~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~~~ 510 (549)
T 2z81_A 437 DVSNNNLDSFS----LFLPRLQELYISRNKLK-TLPD-ASLFPVLLVMKISRNQLKSVPDGIFDRLTSLQKIWLHTNPWD 510 (549)
T ss_dssp ECCSSCCSCCC----CCCTTCCEEECCSSCCS-SCCC-GGGCTTCCEEECCSSCCCCCCTTGGGGCTTCCEEECCSSCBC
T ss_pred ECCCCChhhhc----ccCChhcEEECCCCccC-cCCC-cccCccCCEEecCCCccCCcCHHHHhcCcccCEEEecCCCcc
Confidence 99999999743 57899999999999999 6776 57899999999999999999998888777 999999999999
Q ss_pred Cccccc
Q 039533 524 GMVTTE 529 (949)
Q Consensus 524 ~~~~~~ 529 (949)
+.+|..
T Consensus 511 ~~~~~~ 516 (549)
T 2z81_A 511 CSCPRI 516 (549)
T ss_dssp CCHHHH
T ss_pred CCCccH
Confidence 988743
No 39
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=1.2e-44 Score=430.42 Aligned_cols=442 Identities=19% Similarity=0.153 Sum_probs=300.7
Q ss_pred EEEEcCCCCCCccccCCCCCCCCCceeeccCceeccccCCcccCcccCcEEeeccccccCcCCCCCCCCccceeecCCCc
Q 039533 68 TLLDLRSLKLAGSVSHFIGNLSFLKQLYLQVNSFTHEIPSEIGGLRRLKVLALNNNSICGEIPTNISRCSTLIPIHPQNN 147 (949)
Q Consensus 68 ~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n 147 (949)
..+|++++++++ +|..+. ++|++|+|++|.+++..|..|+++++|++|+|++|+|++..|..|+++++|++|++++|
T Consensus 34 ~~l~ls~~~L~~-ip~~~~--~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N 110 (562)
T 3a79_B 34 SMVDYSNRNLTH-VPKDLP--PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHN 110 (562)
T ss_dssp CEEECTTSCCCS-CCTTSC--TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTS
T ss_pred cEEEcCCCCCcc-CCCCCC--CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCC
Confidence 668899999885 776664 78999999999998777788999999999999999999878888999999999999999
Q ss_pred cccccccccccCCCCCcEEECCCCCCCC-CCCCCcCCCCCccEEeccccccCCCCCCcccCCCcc--ccccccCccc--c
Q 039533 148 QLVGKILSRFSSLSKTEILNLGSNHLTG-SIPSSLGNLSSIHTISLAYNNLDGTIPNSFGWFENL--VFLSLAANNL--S 222 (949)
Q Consensus 148 ~l~~~~~~~~~~L~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L--~~L~Ls~N~l--~ 222 (949)
+|+..... .+++|++|+|++|++++ .+|..|+++++|++|+|++|++++. .+..+++| ++|+|++|.+ +
T Consensus 111 ~l~~lp~~---~l~~L~~L~Ls~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~~---~~~~l~~L~L~~L~L~~n~l~~~ 184 (562)
T 3a79_B 111 RLQNISCC---PMASLRHLDLSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQL---DLLPVAHLHLSCILLDLVSYHIK 184 (562)
T ss_dssp CCCEECSC---CCTTCSEEECCSSCCSBCCCCGGGGGCTTCCEEEEECSBCCTT---TTGGGTTSCEEEEEEEESSCCCC
T ss_pred cCCccCcc---ccccCCEEECCCCCccccCchHhhcccCcccEEecCCCccccC---chhhhhhceeeEEEeeccccccc
Confidence 98854433 78899999999999986 3467899999999999999998853 44555555 9999998887 3
Q ss_pred ccccc------------------ccCCCC--ChhhhccccccccccCCCCCCCCCCcchhccccccCcccEEEccCCCCC
Q 039533 223 VVENK------------------LTGEVP--SLEKLQRLQHFTITSNSLGSGGNDDLSFLCSLTNATRLTWMHINSNNFG 282 (949)
Q Consensus 223 ~~~~~------------------l~~~~~--~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~~~~L~~L~L~~N~l~ 282 (949)
..... +.+.++ .+..+++|+.+++++|+.... .....+..+..+++|+.++++++.+.
T Consensus 185 ~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~--~l~~~~~~l~~l~~L~~L~L~~~~l~ 262 (562)
T 3a79_B 185 GGETESLQIPNTTVLHLVFHPNSLFSVQVNMSVNALGHLQLSNIKLNDENCQ--RLMTFLSELTRGPTLLNVTLQHIETT 262 (562)
T ss_dssp SSSCCEEEECCEEEEEEEECSSSCCCCCCEEEESSEEEEEEEEEECCSTTHH--HHHHHHHHHHSCSSCEEEEEEEEEEC
T ss_pred ccCcccccccCcceEEEEecCccchhhhhhhcccccceEEEecccccccccc--hHHHHHHHHhccCcceEEEecCCcCc
Confidence 22111 111111 122344444444444431000 00011122344445555555554444
Q ss_pred ccCCchhhc--ccccccEEEccCccccCCCCCCC-----CCCCcccEEEeecceecccCC-Cccccc---CCCCEEecCC
Q 039533 283 GLLPGCISN--LSKTIKTLFLNNNKIYGSIPAGI-----GNFVNLQRLDMWNNQLSGTIP-PAIGEL---QNLKILGLNR 351 (949)
Q Consensus 283 ~~~p~~~~~--l~~~L~~L~L~~N~l~~~~~~~~-----~~l~~L~~L~L~~N~l~~~~p-~~~~~l---~~L~~L~Ls~ 351 (949)
+.....+.. ...+|++|++++|+++|.+|..+ ..++.|+.++++.|.+ .+| ..+..+ .+|+.|++++
T Consensus 263 ~~~~~~~~~~~~~~~L~~L~l~~n~l~~~ip~~~~~~~~~~L~~L~~~~~~~~~~--~~p~~~~~~~~~~~~L~~L~l~~ 340 (562)
T 3a79_B 263 WKCSVKLFQFFWPRPVEYLNIYNLTITERIDREEFTYSETALKSLMIEHVKNQVF--LFSKEALYSVFAEMNIKMLSISD 340 (562)
T ss_dssp HHHHHHHHHHHTTSSEEEEEEEEEEECSCCCCCCCCCCSCSCCEEEEEEEEECCC--SSCHHHHHHHHHTCCCSEEEEES
T ss_pred HHHHHHHHHhhhcccccEEEEeccEeeccccchhhhcccccchheehhhccccee--ecChhhhhhhhccCcceEEEccC
Confidence 321111000 01257777777777777777766 5566666666666665 233 222222 4678888888
Q ss_pred cccccccCcccccccccceeecccccccccCCCCCCCCCCCcEEEeeCccccC--CCCCcccCCcccceeeccCCCccCC
Q 039533 352 NKLSGNIPPSIGNLKMLLNLFLNDNFLEVSIPSSLGQCESLIEINLSNNNLSG--TIPPQFFSLSSLSISLDWSRNKLTG 429 (949)
Q Consensus 352 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~--~~p~~~~~l~~l~~~L~ls~N~l~~ 429 (949)
|.+.... ....+++|++|++++|++++.+|..+.++++|++|++++|++++ .+|..+..+++| +.|++++|++++
T Consensus 341 n~~~~~~--~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L-~~L~l~~N~l~~ 417 (562)
T 3a79_B 341 TPFIHMV--CPPSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSL-ETLDVSLNSLNS 417 (562)
T ss_dssp SCCCCCC--CCSSCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTC-CEEECTTSCCBS
T ss_pred CCccccc--CccCCCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCC-CEEECCCCcCCC
Confidence 8775321 12677788888888888887778888888888888888888875 234567777777 678888888887
Q ss_pred CCcc-ccccccccceeeeccccccccCCcccccccchhhcccCccccccccCCCcCCCCCCCEEECCCCcCCCcCccccc
Q 039533 430 SLPI-EVGKLKILEFLYVYENRLEGEIPSTFGNCIRLEQLGMGGNLFQGPISSSLGSLRGLRVLDLSQNNLSGEIPKFLA 508 (949)
Q Consensus 430 ~~p~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 508 (949)
.+|. .+..+++|++|+|++|++++.+|..+. ++|+.|+|++|+|+ .+|..+..+++|+.|+|++|+|++.++..+.
T Consensus 418 ~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~--~~L~~L~L~~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~l~~~~~~ 494 (562)
T 3a79_B 418 HAYDRTCAWAESILVLNLSSNMLTGSVFRCLP--PKVKVLDLHNNRIM-SIPKDVTHLQALQELNVASNQLKSVPDGVFD 494 (562)
T ss_dssp CCSSCCCCCCTTCCEEECCSSCCCGGGGSSCC--TTCSEEECCSSCCC-CCCTTTTSSCCCSEEECCSSCCCCCCTTSTT
T ss_pred ccChhhhcCcccCCEEECCCCCCCcchhhhhc--CcCCEEECCCCcCc-ccChhhcCCCCCCEEECCCCCCCCCCHHHHh
Confidence 4444 477778888888888888777766554 67888888888887 5676666888888888888888843333366
Q ss_pred CCc-cceEeCCCCcCcCcccc
Q 039533 509 GLS-LNNLNLSYNDLEGMVTT 528 (949)
Q Consensus 509 ~~~-L~~l~ls~N~l~~~~~~ 528 (949)
.++ |+.|++++|++++..+.
T Consensus 495 ~l~~L~~L~l~~N~~~c~c~~ 515 (562)
T 3a79_B 495 RLTSLQYIWLHDNPWDCTCPG 515 (562)
T ss_dssp TCTTCCCEECCSCCBCCCHHH
T ss_pred cCCCCCEEEecCCCcCCCcch
Confidence 555 88888888888876654
No 40
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=7.7e-45 Score=397.62 Aligned_cols=198 Identities=31% Similarity=0.573 Sum_probs=160.0
Q ss_pred CCChhhHHHHHHHHhccCCCCCCCccCccCCCCcce--eeeeEEeCCC--CcEEEEEcCCCCCCc--cccCCCCCCCCCc
Q 039533 19 TGNETDRVALLEFKSKSTYDPVGVLGTWNESIHFCK--WYGVTCSRRH--QRVTLLDLRSLKLAG--SVSHFIGNLSFLK 92 (949)
Q Consensus 19 ~~~~~~~~aLl~~k~~~~~~~~~~l~sW~~~~~~C~--w~gv~C~~~~--~~v~~l~l~~~~l~g--~~~~~l~~l~~L~ 92 (949)
.|.++|++||++||+++ .||. .+++|..+++||+ |.||+|+..+ ++|+.|+|++++++| .+|+.++++++|+
T Consensus 2 ~c~~~~~~aL~~~k~~~-~~~~-~l~~W~~~~~~C~~~w~gv~C~~~~~~~~l~~L~L~~~~l~~~~~~~~~l~~l~~L~ 79 (313)
T 1ogq_A 2 LCNPQDKQALLQIKKDL-GNPT-TLSSWLPTTDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPSSLANLPYLN 79 (313)
T ss_dssp CSCHHHHHHHHHHHHHT-TCCG-GGTTCCTTSCTTTTCSTTEEECCSSSCCCEEEEEEECCCCSSCEECCGGGGGCTTCS
T ss_pred CCCHHHHHHHHHHHHhc-CCcc-cccCCCCCCCCCcCCCcceEeCCCCCCceEEEEECCCCCccCCcccChhHhCCCCCC
Confidence 58999999999999987 4766 7899988889998 9999998765 799999999999999 8999999999999
Q ss_pred eeeccC-ceeccccCCcccCcccCcEEeeccccccCcCCCCCCCCccceeecCCCccccccccccccCCCCCcEEECCCC
Q 039533 93 QLYLQV-NSFTHEIPSEIGGLRRLKVLALNNNSICGEIPTNISRCSTLIPIHPQNNQLVGKILSRFSSLSKTEILNLGSN 171 (949)
Q Consensus 93 ~L~L~~-n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~L~~L~~L~Ls~N 171 (949)
+|+|++ |++.+.+|..|+++++|++|+|++|++++.+|..|+++++|++|++++|.+++..|..|..+++|++|+|++|
T Consensus 80 ~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N 159 (313)
T 1ogq_A 80 FLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGN 159 (313)
T ss_dssp EEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSS
T ss_pred eeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCccCCcCChHHhcCCCCCeEECcCC
Confidence 999995 9999999999999999999999999999888888888888877777777777777777777777777777777
Q ss_pred CCCCCCCCCcCCCC-CccEEeccccccCCCCCCcccCCCccccccccCc
Q 039533 172 HLTGSIPSSLGNLS-SIHTISLAYNNLDGTIPNSFGWFENLVFLSLAAN 219 (949)
Q Consensus 172 ~l~~~~p~~~~~l~-~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N 219 (949)
++++.+|..++.++ +|++|+|++|++++.+|..|+.++ |++|+|++|
T Consensus 160 ~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N 207 (313)
T 1ogq_A 160 RISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRN 207 (313)
T ss_dssp CCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-CSEEECCSS
T ss_pred cccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc-ccEEECcCC
Confidence 77766666666666 666666666666666665554443 444444433
No 41
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=3.7e-44 Score=396.61 Aligned_cols=199 Identities=24% Similarity=0.325 Sum_probs=169.3
Q ss_pred HhcCCCCCCeeeeecCceEEEEEEc---CCCEEEEEEEEecCCCcchHHHHHHHHHHHhc-CCCcceeEEeeeecccccC
Q 039533 624 ATSGFSSANLVGVGSFGSVYKGIID---EGRTTIAVKVFNLQHHGASRSFIAECKALKSI-RHRNLVKVLTACLGADYRG 699 (949)
Q Consensus 624 ~~~~y~~~~~lg~G~~g~Vy~~~~~---~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~ 699 (949)
..++|++.+.||+|+||+||+|+++ .+++.||||++.... ...++.+|+++++++ +||||+++++++...+
T Consensus 19 l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~--~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~--- 93 (361)
T 4f9c_A 19 LSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS--HPIRIAAELQCLTVAGGQDNVMGVKYCFRKND--- 93 (361)
T ss_dssp GGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS--CHHHHHHHHHHHHHTCSBTTBCCCSEEEEETT---
T ss_pred ccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc--CHHHHHHHHHHHHHhcCCCCCceEEEEEEECC---
Confidence 4578999999999999999999875 357899999986443 346788999999998 6999999999976544
Q ss_pred CccceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCC-C
Q 039533 700 NDFKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDY-M 778 (949)
Q Consensus 700 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~-~ 778 (949)
..++||||+++|+|.+++. .+++.+++.++.|++.||+|||++ +|+||||||+|||++.+ +
T Consensus 94 --~~~lvmE~~~g~~L~~~~~-------------~l~~~~~~~~~~qll~al~ylH~~---gIiHRDiKPeNiLl~~~~~ 155 (361)
T 4f9c_A 94 --HVVIAMPYLEHESFLDILN-------------SLSFQEVREYMLNLFKALKRIHQF---GIVHRDVKPSNFLYNRRLK 155 (361)
T ss_dssp --EEEEEEECCCCCCHHHHHT-------------TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTT
T ss_pred --EEEEEEeCCCcccHHHHHc-------------CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCcCCHHHeEEeCCCC
Confidence 8999999999999999984 278999999999999999999988 99999999999999876 7
Q ss_pred ceEEeecccceecCCCCCcc--------------------------ccccccCccCccCccccCCC-ccCCccchHHHHH
Q 039533 779 TARVGDFGLARILSPDHTQT--------------------------SSFSVKGSLGYIAPEYGVGC-EVSTNGDVYSYGI 831 (949)
Q Consensus 779 ~~kl~DfG~a~~~~~~~~~~--------------------------~~~~~~gt~~y~aPE~~~~~-~~~~~sDiwSlGv 831 (949)
.+||+|||+|+...+..... .....+||+.|+|||++.+. .++.++||||+||
T Consensus 156 ~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~ 235 (361)
T 4f9c_A 156 KYALVDFGLAQGTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGV 235 (361)
T ss_dssp EEEECCCTTCEECTTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHH
T ss_pred eEEECcCCCCcccCCccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHH
Confidence 99999999998765432110 11234699999999998876 4899999999999
Q ss_pred HHHHHHhCCCCCcc
Q 039533 832 LLLELVIGKKPIDI 845 (949)
Q Consensus 832 vl~elltg~~Pf~~ 845 (949)
++|||+||+.||..
T Consensus 236 il~ell~G~~Pf~~ 249 (361)
T 4f9c_A 236 IFLSLLSGRYPFYK 249 (361)
T ss_dssp HHHHHHHTCSSSSC
T ss_pred HHHHHHHCCCCCCC
Confidence 99999999999953
No 42
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=1.3e-42 Score=402.22 Aligned_cols=371 Identities=20% Similarity=0.212 Sum_probs=223.2
Q ss_pred CCCceeeccCceeccccCCcccCcccCcEEeeccccccCcC-CCCCCCCccceeecCCCccccccccccccCCCCCcEEE
Q 039533 89 SFLKQLYLQVNSFTHEIPSEIGGLRRLKVLALNNNSICGEI-PTNISRCSTLIPIHPQNNQLVGKILSRFSSLSKTEILN 167 (949)
Q Consensus 89 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~-p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~L~~L~~L~ 167 (949)
++|++|+|++|.+++..|..|+++++|++|+|++|.+.+.+ |..|.++++|++|++++|++++..+..|.++++|++|+
T Consensus 30 ~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 109 (455)
T 3v47_A 30 AHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYNQFLQLETGAFNGLANLEVLT 109 (455)
T ss_dssp TTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTTCTTCEECTTTTTTCTTCCEEE
T ss_pred CccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEeCCCCccCccChhhccCcccCCEEe
Confidence 55666666666666555666666666666666666665444 34566666666666666666666666666666666666
Q ss_pred CCCCCCCCCCCCC--cCCCCCccEEeccccccCCCCCCc-ccCCCccccccccCcccccccccccCCCCChhhh--cccc
Q 039533 168 LGSNHLTGSIPSS--LGNLSSIHTISLAYNNLDGTIPNS-FGWFENLVFLSLAANNLSVVENKLTGEVPSLEKL--QRLQ 242 (949)
Q Consensus 168 Ls~N~l~~~~p~~--~~~l~~L~~L~L~~N~l~~~~p~~-~~~l~~L~~L~Ls~N~l~~~~~~l~~~~~~l~~l--~~L~ 242 (949)
|++|.+++.+|.. |+++++|++|+|++|++++..|.. |+++++|++|+|++|.++.+... .+..+ .+|+
T Consensus 110 L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~------~l~~l~~~~L~ 183 (455)
T 3v47_A 110 LTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVKSICEE------DLLNFQGKHFT 183 (455)
T ss_dssp CTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCCBSCCCTT------TSGGGTTCEEE
T ss_pred CCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCCcccccChh------hhhcccccccc
Confidence 6666666533332 666666666666666666555554 56666666666666665533221 12222 4566
Q ss_pred ccccccCCCCCCCCCCcch--hccccccCcccEEEccCCCCCccCCchhhccc--ccccEEEccCccccCCCCCCCCCCC
Q 039533 243 HFTITSNSLGSGGNDDLSF--LCSLTNATRLTWMHINSNNFGGLLPGCISNLS--KTIKTLFLNNNKIYGSIPAGIGNFV 318 (949)
Q Consensus 243 ~L~l~~N~l~~~~~~~~~~--~~~l~~~~~L~~L~L~~N~l~~~~p~~~~~l~--~~L~~L~L~~N~l~~~~~~~~~~l~ 318 (949)
.|++++|.+...+...+.+ ...+..+++|++|++++|++++..|..+.... .+|+.|++++|.+.+...
T Consensus 184 ~L~l~~n~l~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~------- 256 (455)
T 3v47_A 184 LLRLSSITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYNMGSSF------- 256 (455)
T ss_dssp EEECTTCBCTTCSTTCTTHHHHCCTTTTCEEEEEECTTSCCCHHHHHHHHHHTTTCCEEEEECTTCTTTSCCT-------
T ss_pred ccccccCcccccchhhccccccccccccceeeeEecCCCcccccchhhhhccccccceeeEeecccccccccc-------
Confidence 6666666665544332221 12234567788888888888887777766542 458888888887654211
Q ss_pred cccEEEeecceecccCCCccccc--CCCCEEecCCcccccccCcccccccccceeecccccccccCCCCCCCCCCCcEEE
Q 039533 319 NLQRLDMWNNQLSGTIPPAIGEL--QNLKILGLNRNKLSGNIPPSIGNLKMLLNLFLNDNFLEVSIPSSLGQCESLIEIN 396 (949)
Q Consensus 319 ~L~~L~L~~N~l~~~~p~~~~~l--~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 396 (949)
..+.+.+..+..+..+ ++|+.|+|++|++++..|..++++++|+.|+|++|.+++..|..|.++++|++|+
T Consensus 257 -------~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 329 (455)
T 3v47_A 257 -------GHTNFKDPDNFTFKGLEASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLN 329 (455)
T ss_dssp -------TCCSSCCCCTTTTGGGTTSCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEE
T ss_pred -------chhhhccCcccccccccccCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcCcccCCEEE
Confidence 1112222222223222 4566666666666655566666666666666666666655566666666666666
Q ss_pred eeCccccCCCCCcccCCcccceeeccCCCccCCCCccccccccccceeeeccccccccCCcccccccchhhcccCccccc
Q 039533 397 LSNNNLSGTIPPQFFSLSSLSISLDWSRNKLTGSLPIEVGKLKILEFLYVYENRLEGEIPSTFGNCIRLEQLGMGGNLFQ 476 (949)
Q Consensus 397 l~~N~l~~~~p~~~~~l~~l~~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~ 476 (949)
|++|++++..|..+..+++| +.|++++|++++..|..+..+++|++|+|++|++++..+..|..+++|+.|+|++|.++
T Consensus 330 Ls~N~l~~~~~~~~~~l~~L-~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~ 408 (455)
T 3v47_A 330 LSQNFLGSIDSRMFENLDKL-EVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWD 408 (455)
T ss_dssp CCSSCCCEECGGGGTTCTTC-CEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBC
T ss_pred CCCCccCCcChhHhcCcccC-CEEECCCCcccccChhhccccccccEEECCCCccccCCHhHhccCCcccEEEccCCCcc
Confidence 66666665555556666666 56666666666666666666777777777777777555556667777777777777777
Q ss_pred cccC
Q 039533 477 GPIS 480 (949)
Q Consensus 477 ~~~~ 480 (949)
+..|
T Consensus 409 ~~~~ 412 (455)
T 3v47_A 409 CSCP 412 (455)
T ss_dssp CCTT
T ss_pred cCCC
Confidence 6554
No 43
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=1.3e-42 Score=402.33 Aligned_cols=367 Identities=19% Similarity=0.170 Sum_probs=282.6
Q ss_pred ccCcEEeeccccccCcCCCCCCCCccceeecCCCcccccc-ccccccCCCCCcEEECCCCCCCCCCCCCcCCCCCccEEe
Q 039533 113 RRLKVLALNNNSICGEIPTNISRCSTLIPIHPQNNQLVGK-ILSRFSSLSKTEILNLGSNHLTGSIPSSLGNLSSIHTIS 191 (949)
Q Consensus 113 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~-~~~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 191 (949)
++|++|+|++|.+++..|..|+++++|++|++++|.+.+. .+..|.++++|++|+|++|.+++..|..|+++++|++|+
T Consensus 30 ~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 109 (455)
T 3v47_A 30 AHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYNQFLQLETGAFNGLANLEVLT 109 (455)
T ss_dssp TTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTTCTTCEECTTTTTTCTTCCEEE
T ss_pred CccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEeCCCCccCccChhhccCcccCCEEe
Confidence 7899999999999988899999999999999999999754 467899999999999999999988899999999999999
Q ss_pred ccccccCCCCCCc--ccCCCccccccccCcccccccccccCCCCChhhhccccccccccCCCCCCCCCCcchhccccccC
Q 039533 192 LAYNNLDGTIPNS--FGWFENLVFLSLAANNLSVVENKLTGEVPSLEKLQRLQHFTITSNSLGSGGNDDLSFLCSLTNAT 269 (949)
Q Consensus 192 L~~N~l~~~~p~~--~~~l~~L~~L~Ls~N~l~~~~~~l~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~~~ 269 (949)
|++|++++.+|.. |+.+++|++|+|++|+++.+. |. ..+.+++
T Consensus 110 L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~-------~~----------------------------~~~~~l~ 154 (455)
T 3v47_A 110 LTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQ-------PA----------------------------SFFLNMR 154 (455)
T ss_dssp CTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCC-------CC----------------------------GGGGGCT
T ss_pred CCCCCCCccccCcccccCcccCCEEECCCCccCccC-------cc----------------------------cccCCCC
Confidence 9999999855544 999999999999999886442 11 0133445
Q ss_pred cccEEEccCCCCCccCCchhhccc-ccccEEEccCccccCCCCCC--------CCCCCcccEEEeecceecccCCCcccc
Q 039533 270 RLTWMHINSNNFGGLLPGCISNLS-KTIKTLFLNNNKIYGSIPAG--------IGNFVNLQRLDMWNNQLSGTIPPAIGE 340 (949)
Q Consensus 270 ~L~~L~L~~N~l~~~~p~~~~~l~-~~L~~L~L~~N~l~~~~~~~--------~~~l~~L~~L~L~~N~l~~~~p~~~~~ 340 (949)
+|++|++++|++++..|..+..+. ..|+.|++++|.+.+..+.. +..+++|++|+|++|++++..|..+..
T Consensus 155 ~L~~L~L~~n~l~~~~~~~l~~l~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~ 234 (455)
T 3v47_A 155 RFHVLDLTFNKVKSICEEDLLNFQGKHFTLLRLSSITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFD 234 (455)
T ss_dssp TCCEEECTTCCBSCCCTTTSGGGTTCEEEEEECTTCBCTTCSTTCTTHHHHCCTTTTCEEEEEECTTSCCCHHHHHHHHH
T ss_pred cccEEeCCCCcccccChhhhhccccccccccccccCcccccchhhccccccccccccceeeeEecCCCcccccchhhhhc
Confidence 566666666666666665555442 35677777777776544433 235567777777777777766666554
Q ss_pred c---CCCCEEecCCcccccccCcccccccccceeecccccccccCCCCCCCC--CCCcEEEeeCccccCCCCCcccCCcc
Q 039533 341 L---QNLKILGLNRNKLSGNIPPSIGNLKMLLNLFLNDNFLEVSIPSSLGQC--ESLIEINLSNNNLSGTIPPQFFSLSS 415 (949)
Q Consensus 341 l---~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l--~~L~~L~l~~N~l~~~~p~~~~~l~~ 415 (949)
+ ++|+.|++++|.+.+... ..+.+....+..+..+ ++|++|++++|++++.+|..+..+++
T Consensus 235 ~~~~~~L~~L~l~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~ 300 (455)
T 3v47_A 235 AIAGTKIQSLILSNSYNMGSSF--------------GHTNFKDPDNFTFKGLEASGVKTCDLSKSKIFALLKSVFSHFTD 300 (455)
T ss_dssp HTTTCCEEEEECTTCTTTSCCT--------------TCCSSCCCCTTTTGGGTTSCCCEEECCSSCCCEECTTTTTTCTT
T ss_pred cccccceeeEeecccccccccc--------------chhhhccCcccccccccccCceEEEecCccccccchhhcccCCC
Confidence 4 677777777776653211 1122222223333332 57888888888888777888888888
Q ss_pred cceeeccCCCccCCCCccccccccccceeeeccccccccCCcccccccchhhcccCccccccccCCCcCCCCCCCEEECC
Q 039533 416 LSISLDWSRNKLTGSLPIEVGKLKILEFLYVYENRLEGEIPSTFGNCIRLEQLGMGGNLFQGPISSSLGSLRGLRVLDLS 495 (949)
Q Consensus 416 l~~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls 495 (949)
| +.|++++|++++..|..++.+++|++|+|++|++++..|..|+++++|+.|+|++|++++..|..|..+++|++|+|+
T Consensus 301 L-~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~ 379 (455)
T 3v47_A 301 L-EQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELALD 379 (455)
T ss_dssp C-CEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECC
T ss_pred C-CEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccCCEEECCCCcccccChhhccccccccEEECC
Confidence 7 678888888887778888888888888888888887778888888888888888888888888888888999999999
Q ss_pred CCcCCCcCcccccCCc-cceEeCCCCcCcCccccc
Q 039533 496 QNNLSGEIPKFLAGLS-LNNLNLSYNDLEGMVTTE 529 (949)
Q Consensus 496 ~N~l~~~~p~~~~~~~-L~~l~ls~N~l~~~~~~~ 529 (949)
+|+|++.++..+..++ |+.|++++|++++.+|..
T Consensus 380 ~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~ 414 (455)
T 3v47_A 380 TNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRI 414 (455)
T ss_dssp SSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTTT
T ss_pred CCccccCCHhHhccCCcccEEEccCCCcccCCCcc
Confidence 9999877777777666 889999999998887754
No 44
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=1.7e-42 Score=411.75 Aligned_cols=430 Identities=20% Similarity=0.234 Sum_probs=335.6
Q ss_pred CCceeeccCceeccccCCcccCcccCcEEeeccccccCcCCCCCCCCccceeecCCCccccccccccccCCCCCcEEECC
Q 039533 90 FLKQLYLQVNSFTHEIPSEIGGLRRLKVLALNNNSICGEIPTNISRCSTLIPIHPQNNQLVGKILSRFSSLSKTEILNLG 169 (949)
Q Consensus 90 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~L~~L~~L~Ls 169 (949)
..+++++++|++++ +|..+. ++|++|+|++|.|++..|..|+++++|++|++++|+|++..++.|.++++|++|+|+
T Consensus 32 ~~~~l~ls~~~L~~-ip~~~~--~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls 108 (562)
T 3a79_B 32 LESMVDYSNRNLTH-VPKDLP--PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVS 108 (562)
T ss_dssp -CCEEECTTSCCCS-CCTTSC--TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECT
T ss_pred CCcEEEcCCCCCcc-CCCCCC--CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECC
Confidence 34899999999994 887664 899999999999998778899999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCcCCCCCccEEeccccccCC-CCCCcccCCCccccccccCcccccccccccCCCCChhhhccc--ccccc
Q 039533 170 SNHLTGSIPSSLGNLSSIHTISLAYNNLDG-TIPNSFGWFENLVFLSLAANNLSVVENKLTGEVPSLEKLQRL--QHFTI 246 (949)
Q Consensus 170 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~~~~l~~~~~~l~~l~~L--~~L~l 246 (949)
+|+|+ .+|.. .+++|++|+|++|++++ .+|..|+++++|++|+|++|+++.. .+..+++| ++|++
T Consensus 109 ~N~l~-~lp~~--~l~~L~~L~Ls~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~~---------~~~~l~~L~L~~L~L 176 (562)
T 3a79_B 109 HNRLQ-NISCC--PMASLRHLDLSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQL---------DLLPVAHLHLSCILL 176 (562)
T ss_dssp TSCCC-EECSC--CCTTCSEEECCSSCCSBCCCCGGGGGCTTCCEEEEECSBCCTT---------TTGGGTTSCEEEEEE
T ss_pred CCcCC-ccCcc--ccccCCEEECCCCCccccCchHhhcccCcccEEecCCCccccC---------chhhhhhceeeEEEe
Confidence 99999 67766 89999999999999997 3578999999999999999998642 23344444 99999
Q ss_pred ccCCC--CCCCCCCcchhccccccCcccEEEccCCCCCccCCchhhcccccccEEEccCc--------------------
Q 039533 247 TSNSL--GSGGNDDLSFLCSLTNATRLTWMHINSNNFGGLLPGCISNLSKTIKTLFLNNN-------------------- 304 (949)
Q Consensus 247 ~~N~l--~~~~~~~~~~~~~l~~~~~L~~L~L~~N~l~~~~p~~~~~l~~~L~~L~L~~N-------------------- 304 (949)
++|++ ....+..+..+ . ...+ .++++.|.+.+.++.....-.++|+.|++++|
T Consensus 177 ~~n~l~~~~~~~~~l~~l---~-~~~l-~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~l~~~~~~l~~l~~L 251 (562)
T 3a79_B 177 DLVSYHIKGGETESLQIP---N-TTVL-HLVFHPNSLFSVQVNMSVNALGHLQLSNIKLNDENCQRLMTFLSELTRGPTL 251 (562)
T ss_dssp EESSCCCCSSSCCEEEEC---C-EEEE-EEEECSSSCCCCCCEEEESSEEEEEEEEEECCSTTHHHHHHHHHHHHSCSSC
T ss_pred ecccccccccCccccccc---C-cceE-EEEecCccchhhhhhhcccccceEEEecccccccccchHHHHHHHHhccCcc
Confidence 99998 54433322211 1 0122 44566666655554432222234555555555
Q ss_pred --------cccCC----CCCCCCCCCcccEEEeecceecccCCCcc-----cccCCCCEEecCCcccccccC-cccccc-
Q 039533 305 --------KIYGS----IPAGIGNFVNLQRLDMWNNQLSGTIPPAI-----GELQNLKILGLNRNKLSGNIP-PSIGNL- 365 (949)
Q Consensus 305 --------~l~~~----~~~~~~~l~~L~~L~L~~N~l~~~~p~~~-----~~l~~L~~L~Ls~N~l~~~~p-~~~~~l- 365 (949)
.+++. ++..+ ..++|++|++++|.++|.+|..+ .+++.|+.++++.|.+ .+| ..+..+
T Consensus 252 ~~L~L~~~~l~~~~~~~~~~~~-~~~~L~~L~l~~n~l~~~ip~~~~~~~~~~L~~L~~~~~~~~~~--~~p~~~~~~~~ 328 (562)
T 3a79_B 252 LNVTLQHIETTWKCSVKLFQFF-WPRPVEYLNIYNLTITERIDREEFTYSETALKSLMIEHVKNQVF--LFSKEALYSVF 328 (562)
T ss_dssp EEEEEEEEEECHHHHHHHHHHH-TTSSEEEEEEEEEEECSCCCCCCCCCCSCSCCEEEEEEEEECCC--SSCHHHHHHHH
T ss_pred eEEEecCCcCcHHHHHHHHHhh-hcccccEEEEeccEeeccccchhhhcccccchheehhhccccee--ecChhhhhhhh
Confidence 33211 11111 12378888888888887787776 6677777777777776 344 333333
Q ss_pred --cccceeecccccccccCCCCCCCCCCCcEEEeeCccccCCCCCcccCCcccceeeccCCCccCCC--Ccccccccccc
Q 039533 366 --KMLLNLFLNDNFLEVSIPSSLGQCESLIEINLSNNNLSGTIPPQFFSLSSLSISLDWSRNKLTGS--LPIEVGKLKIL 441 (949)
Q Consensus 366 --~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~l~~~L~ls~N~l~~~--~p~~~~~l~~L 441 (949)
.+|+.|++++|.+.... ....+++|++|++++|++++.+|..+..+++| +.|++++|++++. +|..++.+++|
T Consensus 329 ~~~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L-~~L~L~~N~l~~~~~~~~~~~~l~~L 405 (562)
T 3a79_B 329 AEMNIKMLSISDTPFIHMV--CPPSPSSFTFLNFTQNVFTDSVFQGCSTLKRL-QTLILQRNGLKNFFKVALMTKNMSSL 405 (562)
T ss_dssp HTCCCSEEEEESSCCCCCC--CCSSCCCCCEEECCSSCCCTTTTTTCCSCSSC-CEEECCSSCCCBTTHHHHTTTTCTTC
T ss_pred ccCcceEEEccCCCccccc--CccCCCCceEEECCCCccccchhhhhcccCCC-CEEECCCCCcCCcccchhhhcCCCCC
Confidence 56899999999875322 22688999999999999999999999999999 8999999999973 45779999999
Q ss_pred ceeeeccccccccCCc-ccccccchhhcccCccccccccCCCcCCCCCCCEEECCCCcCCCcCcccccCCc-cceEeCCC
Q 039533 442 EFLYVYENRLEGEIPS-TFGNCIRLEQLGMGGNLFQGPISSSLGSLRGLRVLDLSQNNLSGEIPKFLAGLS-LNNLNLSY 519 (949)
Q Consensus 442 ~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~-L~~l~ls~ 519 (949)
++|++++|++++.+|. .+..+++|+.|+|++|++++.+|..+. ++|+.|+|++|+|+ .+|..+..++ |+.|+|++
T Consensus 406 ~~L~l~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~--~~L~~L~L~~N~l~-~ip~~~~~l~~L~~L~L~~ 482 (562)
T 3a79_B 406 ETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSVFRCLP--PKVKVLDLHNNRIM-SIPKDVTHLQALQELNVAS 482 (562)
T ss_dssp CEEECTTSCCBSCCSSCCCCCCTTCCEEECCSSCCCGGGGSSCC--TTCSEEECCSSCCC-CCCTTTTSSCCCSEEECCS
T ss_pred CEEECCCCcCCCccChhhhcCcccCCEEECCCCCCCcchhhhhc--CcCCEEECCCCcCc-ccChhhcCCCCCCEEECCC
Confidence 9999999999985665 588999999999999999998887765 79999999999999 5666555665 99999999
Q ss_pred CcCcCcccc-cccccccccccccCCCCCCC
Q 039533 520 NDLEGMVTT-EGVFKNASATRILGNSKLCG 548 (949)
Q Consensus 520 N~l~~~~~~-~~~~~~~~~~~~~gn~~~c~ 548 (949)
|++++.++. ...+..+..+.+.+|++.|.
T Consensus 483 N~l~~l~~~~~~~l~~L~~L~l~~N~~~c~ 512 (562)
T 3a79_B 483 NQLKSVPDGVFDRLTSLQYIWLHDNPWDCT 512 (562)
T ss_dssp SCCCCCCTTSTTTCTTCCCEECCSCCBCCC
T ss_pred CCCCCCCHHHHhcCCCCCEEEecCCCcCCC
Confidence 999987665 45667788899999999884
No 45
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00 E-value=4.6e-43 Score=411.67 Aligned_cols=253 Identities=21% Similarity=0.294 Sum_probs=206.7
Q ss_pred hcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCCcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCccce
Q 039533 625 TSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFKA 704 (949)
Q Consensus 625 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 704 (949)
.++|++.+.||+|+||.||+|++..+|+.||+|++........+.+.+|+.+|++++|||||++++++.+.. ..+
T Consensus 156 l~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~-----~~~ 230 (573)
T 3uto_A 156 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDN-----EMV 230 (573)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSS-----EEE
T ss_pred ccccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECC-----EEE
Confidence 368999999999999999999999999999999998766555678899999999999999999999976544 899
Q ss_pred eEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCC--CceEE
Q 039533 705 SVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDY--MTARV 782 (949)
Q Consensus 705 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~--~~~kl 782 (949)
+||||++||+|.+++.. ....+++.++..++.||+.||+|||++ +|+||||||+|||++.+ +.+||
T Consensus 231 iv~E~~~gg~L~~~i~~---------~~~~l~e~~~~~~~~qi~~al~ylH~~---~iiHRDlKp~Nill~~~~~~~vKl 298 (573)
T 3uto_A 231 MIYEFMSGGELFEKVAD---------EHNKMSEDEAVEYMRQVCKGLCHMHEN---NYVHLDLKPENIMFTTKRSNELKL 298 (573)
T ss_dssp EEEECCCCCBHHHHHTC---------TTSCEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEE
T ss_pred EEEeecCCCcHHHHHHH---------hCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCChhhccccCCCCCCEEE
Confidence 99999999999999862 234689999999999999999999988 99999999999999854 89999
Q ss_pred eecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhccccCC
Q 039533 783 GDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKALP 862 (949)
Q Consensus 783 ~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~ 862 (949)
+|||+|+.+....... ...||+.|||||++.+..|+.++||||+||++|||++|+.||......+ .+.
T Consensus 299 ~DFG~a~~~~~~~~~~---~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~~-~~~-------- 366 (573)
T 3uto_A 299 IDFGLTAHLDPKQSVK---VTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDE-TLR-------- 366 (573)
T ss_dssp CCCSSCEECCTTSEEE---EECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHH-HHH--------
T ss_pred eeccceeEccCCCcee---eeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHH-HHH--------
Confidence 9999999876554322 3569999999999999999999999999999999999999996432111 000
Q ss_pred CchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 039533 863 DDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVH 926 (949)
Q Consensus 863 ~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 926 (949)
.+......... . .....+..+.+++.+||+.||++|||+.|+++
T Consensus 367 ----~i~~~~~~~~~-------------~---~~~~~s~~~~dli~~~L~~dp~~R~t~~e~l~ 410 (573)
T 3uto_A 367 ----NVKSCDWNMDD-------------S---AFSGISEDGKDFIRKLLLADPNTRMTIHQALE 410 (573)
T ss_dssp ----HHHTTCCCCCS-------------G---GGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred ----HHHhCCCCCCc-------------c---cccCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 00000000000 0 00123445788999999999999999999976
No 46
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00 E-value=5.1e-43 Score=406.38 Aligned_cols=250 Identities=21% Similarity=0.246 Sum_probs=197.0
Q ss_pred hcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCC---CcchHHHHH---HHHHHHhcCCCcceeEEeeeeccccc
Q 039533 625 TSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQH---HGASRSFIA---ECKALKSIRHRNLVKVLTACLGADYR 698 (949)
Q Consensus 625 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~---E~~~l~~l~h~niv~~~~~~~~~~~~ 698 (949)
.++|++.++||+|+||.||+|++..+|+.||||+++... ........+ ++.+++.++|||||++++++.+.+
T Consensus 188 lddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~-- 265 (689)
T 3v5w_A 188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPD-- 265 (689)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSS--
T ss_pred hHHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECC--
Confidence 468999999999999999999999999999999997432 122233333 456667779999999999976554
Q ss_pred CCccceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCC
Q 039533 699 GNDFKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYM 778 (949)
Q Consensus 699 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~ 778 (949)
..|+||||++||+|.+++. ....+++..++.|+.||+.||+|||++ +||||||||+|||++.+|
T Consensus 266 ---~lylVmEy~~GGdL~~~l~----------~~~~l~E~~a~~y~~qIl~aL~yLH~~---gIiHRDLKPeNILld~~G 329 (689)
T 3v5w_A 266 ---KLSFILDLMNGGDLHYHLS----------QHGVFSEADMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLDEHG 329 (689)
T ss_dssp ---EEEEEECCCCSCBHHHHHH----------HHCCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTS
T ss_pred ---EEEEEEecCCCCcHHHHHH----------hcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCchHHeEEeCCC
Confidence 8999999999999999996 235699999999999999999999977 999999999999999999
Q ss_pred ceEEeecccceecCCCCCccccccccCccCccCccccCC-CccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhc
Q 039533 779 TARVGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVG-CEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFG 857 (949)
Q Consensus 779 ~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~ 857 (949)
++||+|||+|+........ ...||+.|||||++.+ ..|+.++||||+||++|||++|++||......+.. ...
T Consensus 330 ~vKL~DFGlA~~~~~~~~~----t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~~--~i~ 403 (689)
T 3v5w_A 330 HVRISDLGLACDFSKKKPH----ASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKH--EID 403 (689)
T ss_dssp CEEECCCTTCEECSSCCCC----SCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCHH--HHH
T ss_pred CEEecccceeeecCCCCCC----CccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHH--HHH
Confidence 9999999999987654332 3569999999999874 57999999999999999999999999643221110 000
Q ss_pred cccCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCC-----HHHHHH
Q 039533 858 RKALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTN-----MTNVVH 926 (949)
Q Consensus 858 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs-----~~ev~~ 926 (949)
. .+..... ..+ ...+..+.+++.+|++.||++|++ ++||.+
T Consensus 404 ~--------~i~~~~~-~~p-------------------~~~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~ 449 (689)
T 3v5w_A 404 R--------MTLTMAV-ELP-------------------DSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE 449 (689)
T ss_dssp H--------HHHHCCC-CCC-------------------TTSCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTT
T ss_pred H--------hhcCCCC-CCC-------------------ccCCHHHHHHHHHHccCCHhHCCCCCCCCHHHHhc
Confidence 0 0000000 000 122446789999999999999998 677654
No 47
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=100.00 E-value=4.5e-42 Score=394.38 Aligned_cols=384 Identities=22% Similarity=0.253 Sum_probs=263.3
Q ss_pred CcEEEEEcCCCCCCccccCCCCCCCCCceeeccCceeccccCCcccCcccC-------------cEEeeccccccCcCCC
Q 039533 65 QRVTLLDLRSLKLAGSVSHFIGNLSFLKQLYLQVNSFTHEIPSEIGGLRRL-------------KVLALNNNSICGEIPT 131 (949)
Q Consensus 65 ~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L-------------~~L~Ls~N~l~~~~p~ 131 (949)
.++..++++++++ |.+|+++++|++|++|+|++|.++|.+|.+++++++| ++|++++|.+++ +|.
T Consensus 11 ~~L~~L~l~~n~l-~~iP~~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~~~l~~L~l~~~~l~~-lp~ 88 (454)
T 1jl5_A 11 TFLQEPLRHSSNL-TEMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLDRQAHELELNNLGLSS-LPE 88 (454)
T ss_dssp ------------------------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHHHTCSEEECTTSCCSC-CCS
T ss_pred ccchhhhcccCch-hhCChhHhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhccCCCEEEecCCcccc-CCC
Confidence 3678899999999 8999999999999999999999999999999998875 999999999984 555
Q ss_pred CCCCCccceeecCCCccccccccccccCCCCCcEEECCCCCCCCCCCCCcCCCCCccEEeccccccCCCCCCcccCCCcc
Q 039533 132 NISRCSTLIPIHPQNNQLVGKILSRFSSLSKTEILNLGSNHLTGSIPSSLGNLSSIHTISLAYNNLDGTIPNSFGWFENL 211 (949)
Q Consensus 132 ~~~~l~~L~~L~l~~n~l~~~~~~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L 211 (949)
. .++|++|++++|++++ +|.. +++|++|++++|++++ +|.. .++|++|+|++|++++ +| .|+++++|
T Consensus 89 ~---~~~L~~L~l~~n~l~~-lp~~---~~~L~~L~l~~n~l~~-l~~~---~~~L~~L~L~~n~l~~-lp-~~~~l~~L 155 (454)
T 1jl5_A 89 L---PPHLESLVASCNSLTE-LPEL---PQSLKSLLVDNNNLKA-LSDL---PPLLEYLGVSNNQLEK-LP-ELQNSSFL 155 (454)
T ss_dssp C---CTTCSEEECCSSCCSS-CCCC---CTTCCEEECCSSCCSC-CCSC---CTTCCEEECCSSCCSS-CC-CCTTCTTC
T ss_pred C---cCCCCEEEccCCcCCc-cccc---cCCCcEEECCCCccCc-ccCC---CCCCCEEECcCCCCCC-Cc-ccCCCCCC
Confidence 3 3688999999999988 4433 4788999999999985 3322 1689999999999996 77 59999999
Q ss_pred ccccccCcccccccccccCCCCChhhhccccccccccCCCCCCCCCCcchhccccccCcccEEEccCCCCCccCCchhhc
Q 039533 212 VFLSLAANNLSVVENKLTGEVPSLEKLQRLQHFTITSNSLGSGGNDDLSFLCSLTNATRLTWMHINSNNFGGLLPGCISN 291 (949)
Q Consensus 212 ~~L~Ls~N~l~~~~~~l~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~~~~L~~L~L~~N~l~~~~p~~~~~ 291 (949)
++|++++|+++.++.. ..+|++|++++|+++.. +.+.++++|++|++++|++++ +|..
T Consensus 156 ~~L~l~~N~l~~lp~~----------~~~L~~L~L~~n~l~~l--------~~~~~l~~L~~L~l~~N~l~~-l~~~--- 213 (454)
T 1jl5_A 156 KIIDVDNNSLKKLPDL----------PPSLEFIAAGNNQLEEL--------PELQNLPFLTAIYADNNSLKK-LPDL--- 213 (454)
T ss_dssp CEEECCSSCCSCCCCC----------CTTCCEEECCSSCCSSC--------CCCTTCTTCCEEECCSSCCSS-CCCC---
T ss_pred CEEECCCCcCcccCCC----------cccccEEECcCCcCCcC--------ccccCCCCCCEEECCCCcCCc-CCCC---
Confidence 9999999988765421 24789999999988753 246788889999999999886 3432
Q ss_pred ccccccEEEccCccccCCCCCCCCCCCcccEEEeecceecccCCCcccccCCCCEEecCCcccccccCccccccccccee
Q 039533 292 LSKTIKTLFLNNNKIYGSIPAGIGNFVNLQRLDMWNNQLSGTIPPAIGELQNLKILGLNRNKLSGNIPPSIGNLKMLLNL 371 (949)
Q Consensus 292 l~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 371 (949)
+.+|++|++++|+++ .+|. ++.+++|++|++++|++++ +|.. +++|+.|++++|++++ +|.. .++|+.|
T Consensus 214 -~~~L~~L~l~~n~l~-~lp~-~~~l~~L~~L~l~~N~l~~-l~~~---~~~L~~L~l~~N~l~~-l~~~---~~~L~~L 282 (454)
T 1jl5_A 214 -PLSLESIVAGNNILE-ELPE-LQNLPFLTTIYADNNLLKT-LPDL---PPSLEALNVRDNYLTD-LPEL---PQSLTFL 282 (454)
T ss_dssp -CTTCCEEECCSSCCS-SCCC-CTTCTTCCEEECCSSCCSS-CCSC---CTTCCEEECCSSCCSC-CCCC---CTTCCEE
T ss_pred -cCcccEEECcCCcCC-cccc-cCCCCCCCEEECCCCcCCc-cccc---ccccCEEECCCCcccc-cCcc---cCcCCEE
Confidence 246899999999998 5674 8889999999999999985 5543 3788999999999985 5553 3788899
Q ss_pred ecccccccccCCCCCCCCCCCcEEEeeCccccCCCCCcccCC-cccceeeccCCCccCCCCccccccccccceeeecccc
Q 039533 372 FLNDNFLEVSIPSSLGQCESLIEINLSNNNLSGTIPPQFFSL-SSLSISLDWSRNKLTGSLPIEVGKLKILEFLYVYENR 450 (949)
Q Consensus 372 ~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l-~~l~~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 450 (949)
++++|++++. |.. .++|++|++++|++++ ++ .+ .++ +.|++++|++++ +|.. +++|++|++++|+
T Consensus 283 ~ls~N~l~~l-~~~---~~~L~~L~l~~N~l~~-i~----~~~~~L-~~L~Ls~N~l~~-lp~~---~~~L~~L~L~~N~ 348 (454)
T 1jl5_A 283 DVSENIFSGL-SEL---PPNLYYLNASSNEIRS-LC----DLPPSL-EELNVSNNKLIE-LPAL---PPRLERLIASFNH 348 (454)
T ss_dssp ECCSSCCSEE-SCC---CTTCCEEECCSSCCSE-EC----CCCTTC-CEEECCSSCCSC-CCCC---CTTCCEEECCSSC
T ss_pred ECcCCccCcc-cCc---CCcCCEEECcCCcCCc-cc----CCcCcC-CEEECCCCcccc-cccc---CCcCCEEECCCCc
Confidence 9999998862 221 2678899999998884 33 22 355 788899999886 5554 5788889999998
Q ss_pred ccccCCcccccccchhhcccCcccccc--ccCCCcCCCCCCCEEECCCCcCCCcCcccccCCccceEeCCCCcCcC
Q 039533 451 LEGEIPSTFGNCIRLEQLGMGGNLFQG--PISSSLGSLRGLRVLDLSQNNLSGEIPKFLAGLSLNNLNLSYNDLEG 524 (949)
Q Consensus 451 l~~~~p~~~~~l~~L~~L~l~~N~l~~--~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~l~ls~N~l~~ 524 (949)
++ .+|. .+++|+.|++++|++++ .+|.+++.+ +.|++.|.+|... .+|+.|++++|++++
T Consensus 349 l~-~lp~---~l~~L~~L~L~~N~l~~l~~ip~~l~~L--------~~n~~~~~i~~~~--~~L~~L~ls~N~l~~ 410 (454)
T 1jl5_A 349 LA-EVPE---LPQNLKQLHVEYNPLREFPDIPESVEDL--------RMNSHLAEVPELP--QNLKQLHVETNPLRE 410 (454)
T ss_dssp CS-CCCC---CCTTCCEEECCSSCCSSCCCCCTTCCEE--------ECCC--------------------------
T ss_pred cc-cccc---hhhhccEEECCCCCCCcCCCChHHHHhh--------hhccccccccccc--CcCCEEECCCCcCCc
Confidence 88 4666 46888889999998888 677766543 3455666666532 237777888888776
No 48
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00 E-value=2.8e-42 Score=379.71 Aligned_cols=285 Identities=29% Similarity=0.461 Sum_probs=224.9
Q ss_pred CHHHHHHHhcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCCcchHHHHHHHHHHHhcCCCcceeEEeeeeccc
Q 039533 617 SYQDLYNATSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHGASRSFIAECKALKSIRHRNLVKVLTACLGAD 696 (949)
Q Consensus 617 ~~~~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 696 (949)
++.++..++++|++.+.||+|+||.||+|++. +++.||||++........+.+.+|++++++++||||+++++++...+
T Consensus 30 ~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 108 (321)
T 2qkw_B 30 PLVDLEEATNNFDHKFLIGHGVFGKVYKGVLR-DGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERN 108 (321)
T ss_dssp CCSCCCCCCCCCSCCCCSCBCSSSEEEEEECT-TCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTT
T ss_pred cHHHHHHHHhccCccceeecCCCeeEEEEEEC-CCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCC
Confidence 33455567899999999999999999999975 68899999987666666678999999999999999999999975443
Q ss_pred ccCCccceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecC
Q 039533 697 YRGNDFKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDD 776 (949)
Q Consensus 697 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~ 776 (949)
..++||||+++|+|.+++.... .....+++.+++.++.|++.||+|||++ +|+||||||+||+++.
T Consensus 109 -----~~~lv~e~~~~~~L~~~l~~~~------~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~ivH~dlkp~Nil~~~ 174 (321)
T 2qkw_B 109 -----EMILIYKYMENGNLKRHLYGSD------LPTMSMSWEQRLEICIGAARGLHYLHTR---AIIHRDVKSINILLDE 174 (321)
T ss_dssp -----CCEEEEECCTTCBTGGGSSSSC------CCSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCSTTEEECT
T ss_pred -----eEEEEEEcCCCCcHHHHHhccC------CCccccCHHHHHHHHHHHHHHHHHhcCC---CeecCCCCHHHEEECC
Confidence 7899999999999999997321 1234589999999999999999999987 9999999999999999
Q ss_pred CCceEEeecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccccccC-chhhh
Q 039533 777 YMTARVGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGD-INLHN 855 (949)
Q Consensus 777 ~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~-~~~~~ 855 (949)
++.+||+|||+++...............||+.|+|||++.+..++.++|||||||++|||++|+.||....... .....
T Consensus 175 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~ 254 (321)
T 2qkw_B 175 NFVPKITDFGISKKGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAE 254 (321)
T ss_dssp TCCEEECCCTTCEECSSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHH
T ss_pred CCCEEEeecccccccccccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHH
Confidence 99999999999987654333222223458999999999988899999999999999999999999997543221 12222
Q ss_pred hccccC-CCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHHhHHh
Q 039533 856 FGRKAL-PDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHELQSIKNI 934 (949)
Q Consensus 856 ~~~~~~-~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~~~ 934 (949)
+..... .......+++...... ..+++..+.+++.+|++.||++|||++||++.|+.+.+.
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~l~~ 316 (321)
T 2qkw_B 255 WAVESHNNGQLEQIVDPNLADKI------------------RPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRL 316 (321)
T ss_dssp HTHHHHTTTCCCSSSSSSCTTCS------------------CHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHS
T ss_pred HhhhccccccHHHhcChhhcccc------------------CHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhhc
Confidence 211111 1112222222221111 136677899999999999999999999999999998754
No 49
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00 E-value=5.4e-42 Score=378.43 Aligned_cols=289 Identities=33% Similarity=0.560 Sum_probs=230.0
Q ss_pred cccccCHHHHHHHhcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCC-cchHHHHHHHHHHHhcCCCcceeEEe
Q 039533 612 SLLYLSYQDLYNATSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHH-GASRSFIAECKALKSIRHRNLVKVLT 690 (949)
Q Consensus 612 ~~~~~~~~~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~ 690 (949)
....++++++..+.++|++.+.||+|+||.||+|+.. +++.||||++..... .....+.+|++++++++||||+++++
T Consensus 16 ~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~ 94 (326)
T 3uim_A 16 QLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLA-DGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRG 94 (326)
T ss_dssp CCEECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCS-SSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCE
T ss_pred ccceecHHHHHHHhhccccceeEecCCCcEEEEEEec-CCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEE
Confidence 4556888999999999999999999999999999865 688999999875432 23347899999999999999999999
Q ss_pred eeecccccCCccceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCC
Q 039533 691 ACLGADYRGNDFKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPS 770 (949)
Q Consensus 691 ~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~ 770 (949)
++...+ ..++||||+++|+|.+++.... .....+++..+..|+.|++.||+|||+++.++|+||||||+
T Consensus 95 ~~~~~~-----~~~lv~e~~~~~~L~~~l~~~~------~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~ 163 (326)
T 3uim_A 95 FCMTPT-----ERLLVYPYMANGSVASCLRERP------ESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAA 163 (326)
T ss_dssp EECCSS-----CCEEEEECCTTCBHHHHHHCCS------TTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGG
T ss_pred EEecCC-----ceEEEEEeccCCCHHHHHHhcc------ccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchh
Confidence 976544 7899999999999999997322 12345899999999999999999999876668999999999
Q ss_pred CeeecCCCceEEeecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCcccc---
Q 039533 771 NVLLDDYMTARVGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMF--- 847 (949)
Q Consensus 771 NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~--- 847 (949)
||+++.++.+||+|||+++......... .....||+.|+|||++.+..++.++|||||||++|||++|+.||+...
T Consensus 164 Nil~~~~~~~kl~Dfg~~~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~ 242 (326)
T 3uim_A 164 NILLDEEFEAVVGDFGLAKLMDYKDTHV-TTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLAN 242 (326)
T ss_dssp GEEECTTCCEEECCCSSCEECCSSSSCE-ECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTT
T ss_pred hEEECCCCCEEeccCccccccCcccccc-cccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCccccccccc
Confidence 9999999999999999998775443322 223559999999999988889999999999999999999999996321
Q ss_pred ccCchhhhhccccCCCc-hhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 039533 848 EGDINLHNFGRKALPDD-VMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVH 926 (949)
Q Consensus 848 ~~~~~~~~~~~~~~~~~-~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 926 (949)
........+........ .....+....... ..+.+..+.+++.+|++.||++|||++||++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~l~~li~~cl~~dP~~Rps~~ell~ 304 (326)
T 3uim_A 243 DDDVMLLDWVKGLLKEKKLEALVDVDLQGNY------------------KDEEVEQLIQVALLCTQSSPMERPKMSEVVR 304 (326)
T ss_dssp TSCSBHHHHHTTTTSSCCSTTSSCTTCTTSC------------------CHHHHHHHHHHHHHHTCSCGGGSCCHHHHHH
T ss_pred ccchhHHHHHHHHhhchhhhhhcChhhcccc------------------CHHHHHHHHHHHHHHhCcCCccCCCHHHHHH
Confidence 12222333333333222 2333333322211 1356778999999999999999999999999
Q ss_pred HHHHh
Q 039533 927 ELQSI 931 (949)
Q Consensus 927 ~L~~i 931 (949)
.|+..
T Consensus 305 ~L~~~ 309 (326)
T 3uim_A 305 MLEGD 309 (326)
T ss_dssp HHHTS
T ss_pred HhcCc
Confidence 99863
No 50
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=100.00 E-value=2.9e-41 Score=387.69 Aligned_cols=387 Identities=21% Similarity=0.272 Sum_probs=158.5
Q ss_pred cCCCCCCCCCceeeccCceeccccCCcccCcccCcEEeeccccccCcCCCCCCCCccceeecCCCccccccccccccCCC
Q 039533 82 SHFIGNLSFLKQLYLQVNSFTHEIPSEIGGLRRLKVLALNNNSICGEIPTNISRCSTLIPIHPQNNQLVGKILSRFSSLS 161 (949)
Q Consensus 82 ~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~L~ 161 (949)
.|.-...++|++|++++|++ |.+|.+|+++++|++|+|++|.++|.+|..++++++|+.+++..|.. .
T Consensus 4 ~p~~~~~~~L~~L~l~~n~l-~~iP~~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~-----------~ 71 (454)
T 1jl5_A 4 NPRNVSNTFLQEPLRHSSNL-TEMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLD-----------R 71 (454)
T ss_dssp -------------------------------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHH-----------H
T ss_pred cccccccccchhhhcccCch-hhCChhHhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhc-----------c
Confidence 34444578999999999999 79999999999999999999999999999999999874444443321 2
Q ss_pred CCcEEECCCCCCCCCCCCCcCCCCCccEEeccccccCCCCCCcccCCCccccccccCcccccccccccCCCCChhhhccc
Q 039533 162 KTEILNLGSNHLTGSIPSSLGNLSSIHTISLAYNNLDGTIPNSFGWFENLVFLSLAANNLSVVENKLTGEVPSLEKLQRL 241 (949)
Q Consensus 162 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~l~~~~~~l~~l~~L 241 (949)
++++|++++|.+++ +|.. .++|++|++++|++++ +|.. +++|++|++++|+++.++. +| ++|
T Consensus 72 ~l~~L~l~~~~l~~-lp~~---~~~L~~L~l~~n~l~~-lp~~---~~~L~~L~l~~n~l~~l~~-----~~-----~~L 133 (454)
T 1jl5_A 72 QAHELELNNLGLSS-LPEL---PPHLESLVASCNSLTE-LPEL---PQSLKSLLVDNNNLKALSD-----LP-----PLL 133 (454)
T ss_dssp TCSEEECTTSCCSC-CCSC---CTTCSEEECCSSCCSS-CCCC---CTTCCEEECCSSCCSCCCS-----CC-----TTC
T ss_pred CCCEEEecCCcccc-CCCC---cCCCCEEEccCCcCCc-cccc---cCCCcEEECCCCccCcccC-----CC-----CCC
Confidence 33444444444442 2221 1344444444444443 3322 2444444444444433221 00 344
Q ss_pred cccccccCCCCCCCCCCcchhccccccCcccEEEccCCCCCccCCchhhcccccccEEEccCccccCCCCCCCCCCCccc
Q 039533 242 QHFTITSNSLGSGGNDDLSFLCSLTNATRLTWMHINSNNFGGLLPGCISNLSKTIKTLFLNNNKIYGSIPAGIGNFVNLQ 321 (949)
Q Consensus 242 ~~L~l~~N~l~~~~~~~~~~~~~l~~~~~L~~L~L~~N~l~~~~p~~~~~l~~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 321 (949)
++|++++|+++..+ .+.++++|++|++++|++++ +|..+ .+|++|++++|++++ +| .++.+++|+
T Consensus 134 ~~L~L~~n~l~~lp--------~~~~l~~L~~L~l~~N~l~~-lp~~~----~~L~~L~L~~n~l~~-l~-~~~~l~~L~ 198 (454)
T 1jl5_A 134 EYLGVSNNQLEKLP--------ELQNSSFLKIIDVDNNSLKK-LPDLP----PSLEFIAAGNNQLEE-LP-ELQNLPFLT 198 (454)
T ss_dssp CEEECCSSCCSSCC--------CCTTCTTCCEEECCSSCCSC-CCCCC----TTCCEEECCSSCCSS-CC-CCTTCTTCC
T ss_pred CEEECcCCCCCCCc--------ccCCCCCCCEEECCCCcCcc-cCCCc----ccccEEECcCCcCCc-Cc-cccCCCCCC
Confidence 44444444443211 23444445555555555443 22221 235555555555543 33 345555555
Q ss_pred EEEeecceecccCCCcccccCCCCEEecCCcccccccCcccccccccceeecccccccccCCCCCCCCCCCcEEEeeCcc
Q 039533 322 RLDMWNNQLSGTIPPAIGELQNLKILGLNRNKLSGNIPPSIGNLKMLLNLFLNDNFLEVSIPSSLGQCESLIEINLSNNN 401 (949)
Q Consensus 322 ~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~ 401 (949)
+|++++|++++ +|... ++|+.|++++|+++ .+|. ++++++|++|++++|++++ +|.. +++|++|++++|+
T Consensus 199 ~L~l~~N~l~~-l~~~~---~~L~~L~l~~n~l~-~lp~-~~~l~~L~~L~l~~N~l~~-l~~~---~~~L~~L~l~~N~ 268 (454)
T 1jl5_A 199 AIYADNNSLKK-LPDLP---LSLESIVAGNNILE-ELPE-LQNLPFLTTIYADNNLLKT-LPDL---PPSLEALNVRDNY 268 (454)
T ss_dssp EEECCSSCCSS-CCCCC---TTCCEEECCSSCCS-SCCC-CTTCTTCCEEECCSSCCSS-CCSC---CTTCCEEECCSSC
T ss_pred EEECCCCcCCc-CCCCc---CcccEEECcCCcCC-cccc-cCCCCCCCEEECCCCcCCc-cccc---ccccCEEECCCCc
Confidence 55555555543 23221 24555555555554 3342 4455555555555555543 2321 2445555555555
Q ss_pred ccCCCCCcccCCcccceeeccCCCccCCCCccccccccccceeeeccccccccCCcccccc-cchhhcccCccccccccC
Q 039533 402 LSGTIPPQFFSLSSLSISLDWSRNKLTGSLPIEVGKLKILEFLYVYENRLEGEIPSTFGNC-IRLEQLGMGGNLFQGPIS 480 (949)
Q Consensus 402 l~~~~p~~~~~l~~l~~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l-~~L~~L~l~~N~l~~~~~ 480 (949)
+++ +|..+ +++ +.|++++|++++. |.. .++|++|++++|++++ ++ .+ ++|+.|++++|++++ +|
T Consensus 269 l~~-l~~~~---~~L-~~L~ls~N~l~~l-~~~---~~~L~~L~l~~N~l~~-i~----~~~~~L~~L~Ls~N~l~~-lp 333 (454)
T 1jl5_A 269 LTD-LPELP---QSL-TFLDVSENIFSGL-SEL---PPNLYYLNASSNEIRS-LC----DLPPSLEELNVSNNKLIE-LP 333 (454)
T ss_dssp CSC-CCCCC---TTC-CEEECCSSCCSEE-SCC---CTTCCEEECCSSCCSE-EC----CCCTTCCEEECCSSCCSC-CC
T ss_pred ccc-cCccc---CcC-CEEECcCCccCcc-cCc---CCcCCEEECcCCcCCc-cc----CCcCcCCEEECCCCcccc-cc
Confidence 542 33322 233 3455555555431 110 1344555555555543 11 11 244555555555543 33
Q ss_pred CCcCCCCCCCEEECCCCcCCCcCcccccCCccceEeCCCCcCcC------------------cccccccccccccccccC
Q 039533 481 SSLGSLRGLRVLDLSQNNLSGEIPKFLAGLSLNNLNLSYNDLEG------------------MVTTEGVFKNASATRILG 542 (949)
Q Consensus 481 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~l~ls~N~l~~------------------~~~~~~~~~~~~~~~~~g 542 (949)
.. +++|+.|++++|++++ +|. ...+|++|++++|++++ .+|.. +.++..+.+.+
T Consensus 334 ~~---~~~L~~L~L~~N~l~~-lp~--~l~~L~~L~L~~N~l~~l~~ip~~l~~L~~n~~~~~i~~~--~~~L~~L~ls~ 405 (454)
T 1jl5_A 334 AL---PPRLERLIASFNHLAE-VPE--LPQNLKQLHVEYNPLREFPDIPESVEDLRMNSHLAEVPEL--PQNLKQLHVET 405 (454)
T ss_dssp CC---CTTCCEEECCSSCCSC-CCC--CCTTCCEEECCSSCCSSCCCCCTTCCEEECCC---------------------
T ss_pred cc---CCcCCEEECCCCcccc-ccc--hhhhccEEECCCCCCCcCCCChHHHHhhhhcccccccccc--cCcCCEEECCC
Confidence 32 3445555555555542 333 11125555555555554 33331 25567777888
Q ss_pred CCCC
Q 039533 543 NSKL 546 (949)
Q Consensus 543 n~~~ 546 (949)
|+..
T Consensus 406 N~l~ 409 (454)
T 1jl5_A 406 NPLR 409 (454)
T ss_dssp ----
T ss_pred CcCC
Confidence 8654
No 51
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00 E-value=3.5e-42 Score=377.01 Aligned_cols=270 Identities=25% Similarity=0.365 Sum_probs=217.8
Q ss_pred hcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCCcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCccce
Q 039533 625 TSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFKA 704 (949)
Q Consensus 625 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 704 (949)
.++|.+.+.||+|+||+||+|++..+++.||+|++........+.+.+|++++++++||||+++++++...+ ..+
T Consensus 9 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-----~~~ 83 (310)
T 3s95_A 9 PSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDK-----RLN 83 (310)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETT-----EEE
T ss_pred hhHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCC-----eeE
Confidence 357888999999999999999999899999999987665566678999999999999999999999986544 789
Q ss_pred eEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEee
Q 039533 705 SVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVGD 784 (949)
Q Consensus 705 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~D 784 (949)
+||||+++|+|.+++.. ....+++.++..++.|++.||+|||++ +|+||||||+||+++.++.+||+|
T Consensus 84 lv~e~~~~~~L~~~l~~---------~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~D 151 (310)
T 3s95_A 84 FITEYIKGGTLRGIIKS---------MDSQYPWSQRVSFAKDIASGMAYLHSM---NIIHRDLNSHNCLVRENKNVVVAD 151 (310)
T ss_dssp EEEECCTTCBHHHHHHH---------CCTTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEECTTSCEEECC
T ss_pred EEEEecCCCcHHHHHHh---------ccCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCcCeEEECCCCCEEEee
Confidence 99999999999999962 235689999999999999999999988 899999999999999999999999
Q ss_pred cccceecCCCCCcc------------ccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccccccCch
Q 039533 785 FGLARILSPDHTQT------------SSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDIN 852 (949)
Q Consensus 785 fG~a~~~~~~~~~~------------~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~ 852 (949)
||+++......... ......||+.|+|||++.+..++.++|||||||++|||++|..||.........
T Consensus 152 fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~ 231 (310)
T 3s95_A 152 FGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMD 231 (310)
T ss_dssp CTTCEECC--------------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTT
T ss_pred cccceecccccccccccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHH
Confidence 99998765443211 111346999999999999999999999999999999999999998643222111
Q ss_pred hhhhccccCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHHhH
Q 039533 853 LHNFGRKALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHELQSIK 932 (949)
Q Consensus 853 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~ 932 (949)
.. .......+.... ..++..+.+++.+||+.||++|||++|+++.|++++
T Consensus 232 ~~--------~~~~~~~~~~~~----------------------~~~~~~l~~li~~~l~~dP~~Rps~~~l~~~L~~l~ 281 (310)
T 3s95_A 232 FG--------LNVRGFLDRYCP----------------------PNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLR 281 (310)
T ss_dssp SS--------BCHHHHHHHTCC----------------------TTCCTTHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred Hh--------hhhhccccccCC----------------------CCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 10 001111111110 123445788999999999999999999999999999
Q ss_pred HhhccCCCC
Q 039533 933 NILLGVELC 941 (949)
Q Consensus 933 ~~~~~~~~~ 941 (949)
.......+.
T Consensus 282 ~~~~~~~~~ 290 (310)
T 3s95_A 282 MHLAGHLPL 290 (310)
T ss_dssp HHHHHCCCC
T ss_pred HhccCcccC
Confidence 887765444
No 52
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00 E-value=2.1e-40 Score=362.45 Aligned_cols=285 Identities=30% Similarity=0.470 Sum_probs=225.2
Q ss_pred cccccCHHHHHHHhcCCCCC------CeeeeecCceEEEEEEcCCCEEEEEEEEecCC----CcchHHHHHHHHHHHhcC
Q 039533 612 SLLYLSYQDLYNATSGFSSA------NLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQH----HGASRSFIAECKALKSIR 681 (949)
Q Consensus 612 ~~~~~~~~~l~~~~~~y~~~------~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~ 681 (949)
....|++.++..++++|... +.||+|+||.||+|.. +++.||||++.... ....+.+.+|+.++++++
T Consensus 11 ~~~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~ 88 (307)
T 2nru_A 11 RFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV--NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQ 88 (307)
T ss_dssp CCEECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES--SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCC
T ss_pred CCCcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE--CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcC
Confidence 35678999999999998877 8999999999999987 47899999986432 233567899999999999
Q ss_pred CCcceeEEeeeecccccCCccceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCC
Q 039533 682 HRNLVKVLTACLGADYRGNDFKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPV 761 (949)
Q Consensus 682 h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ 761 (949)
||||+++++++...+ ..++||||+++++|.+++... .....+++..+..++.|++.||+|||++ +
T Consensus 89 h~~i~~~~~~~~~~~-----~~~lv~e~~~~~~L~~~l~~~-------~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~ 153 (307)
T 2nru_A 89 HENLVELLGFSSDGD-----DLCLVYVYMPNGSLLDRLSCL-------DGTPPLSWHMRCKIAQGAANGINFLHEN---H 153 (307)
T ss_dssp CTTBCCEEEEECSSS-----SCEEEEECCTTCBHHHHHHTG-------GGCCCCCHHHHHHHHHHHHHHHHHHHHT---T
T ss_pred CCCeEEEEEEEecCC-----ceEEEEEecCCCcHHHHHHhc-------cCCCCCCHHHHHHHHHHHHHHHHHHhcC---C
Confidence 999999999976543 789999999999999998632 1234589999999999999999999987 9
Q ss_pred eEecCCCCCCeeecCCCceEEeecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCC
Q 039533 762 TAHCDLKPSNVLLDDYMTARVGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKK 841 (949)
Q Consensus 762 ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~ 841 (949)
|+||||||+||++++++.+||+|||+++...............||+.|+|||++.+ .++.++||||||+++|||++|+.
T Consensus 154 i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~ 232 (307)
T 2nru_A 154 HIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLP 232 (307)
T ss_dssp EECSCCCGGGEEECTTCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCC
T ss_pred eecCCCCHHHEEEcCCCcEEEeecccccccccccccccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCC
Confidence 99999999999999999999999999987665443332334569999999998865 58999999999999999999999
Q ss_pred CCccccccCchhhhhccc--cCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCC
Q 039533 842 PIDIMFEGDINLHNFGRK--ALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRT 919 (949)
Q Consensus 842 Pf~~~~~~~~~~~~~~~~--~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP 919 (949)
||+....... ...+... .....+.+.+++.+...+ ...+..+.+++.+|++.||++||
T Consensus 233 p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~l~~li~~cl~~~p~~Rp 292 (307)
T 2nru_A 233 AVDEHREPQL-LLDIKEEIEDEEKTIEDYIDKKMNDAD-------------------STSVEAMYSVASQCLHEKKNKRP 292 (307)
T ss_dssp SBCTTBSSSB-TTHHHHHHHTTSCCHHHHSCSSCSCCC-------------------HHHHHHHHHHHHHHTCSSTTTSC
T ss_pred CcccCcchHH-HHHHHHHhhhhhhhhhhhccccccccc-------------------hHHHHHHHHHHHHHcCCCcccCc
Confidence 9975432211 1111110 011123333333332221 25577899999999999999999
Q ss_pred CHHHHHHHHHHhHHh
Q 039533 920 NMTNVVHELQSIKNI 934 (949)
Q Consensus 920 s~~ev~~~L~~i~~~ 934 (949)
|++||++.|++++.+
T Consensus 293 s~~~l~~~L~~l~~s 307 (307)
T 2nru_A 293 DIKKVQQLLQEMTAS 307 (307)
T ss_dssp CHHHHHHHHHHHC--
T ss_pred CHHHHHHHHHHHhcC
Confidence 999999999998653
No 53
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00 E-value=2.6e-41 Score=367.22 Aligned_cols=251 Identities=20% Similarity=0.283 Sum_probs=206.8
Q ss_pred hcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCCcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCccce
Q 039533 625 TSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFKA 704 (949)
Q Consensus 625 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 704 (949)
.++|++.+.||+|+||+||+|.+..+++.||||++........+.+.+|+.++++++||||+++++++...+ ..+
T Consensus 19 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-----~~~ 93 (297)
T 3fxz_A 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGD-----ELW 93 (297)
T ss_dssp GGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETT-----EEE
T ss_pred hhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECC-----EEE
Confidence 468999999999999999999998899999999998766666778999999999999999999999976544 789
Q ss_pred eEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEee
Q 039533 705 SVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVGD 784 (949)
Q Consensus 705 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~D 784 (949)
+||||+++|+|.+++. ...+++.++..++.|++.||+|||++ +|+||||||+||+++.++.+||+|
T Consensus 94 lv~e~~~~~~L~~~~~-----------~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~D 159 (297)
T 3fxz_A 94 VVMEYLAGGSLTDVVT-----------ETCMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTD 159 (297)
T ss_dssp EEEECCTTCBHHHHHH-----------HSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECC
T ss_pred EEEECCCCCCHHHHHh-----------hcCCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEECCCCCEEEee
Confidence 9999999999999986 23488999999999999999999988 999999999999999999999999
Q ss_pred cccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhccccCCCc
Q 039533 785 FGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKALPDD 864 (949)
Q Consensus 785 fG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~ 864 (949)
||++.......... ....||+.|+|||++.+..++.++|||||||++|||++|+.||.......... ......
T Consensus 160 fg~~~~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~-~~~~~~---- 232 (297)
T 3fxz_A 160 FGFCAQITPEQSKR--STMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALY-LIATNG---- 232 (297)
T ss_dssp CTTCEECCSTTCCB--CCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHH-HHHHHC----
T ss_pred CCCceecCCccccc--CCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHH-HHHhCC----
Confidence 99998776544322 24569999999999999999999999999999999999999996432111000 000000
Q ss_pred hhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 039533 865 VMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVH 926 (949)
Q Consensus 865 ~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 926 (949)
.+.. .. ....+..+.+++.+||+.||++|||++|+++
T Consensus 233 -----~~~~-~~-------------------~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 269 (297)
T 3fxz_A 233 -----TPEL-QN-------------------PEKLSAIFRDFLNRCLEMDVEKRGSAKELLQ 269 (297)
T ss_dssp -----SCCC-SC-------------------GGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred -----CCCC-CC-------------------ccccCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence 0000 00 0123456789999999999999999999976
No 54
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00 E-value=3e-41 Score=371.37 Aligned_cols=282 Identities=23% Similarity=0.287 Sum_probs=212.1
Q ss_pred hcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCCcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCccce
Q 039533 625 TSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFKA 704 (949)
Q Consensus 625 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 704 (949)
.++|++.++||+|+||+||+|++. ++.||||+++... ........|+.++++++||||+++++++.... ......+
T Consensus 23 ~~~y~~~~~lg~G~~g~Vy~~~~~--~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~-~~~~~~~ 98 (322)
T 3soc_A 23 SMPLQLLEVKARGRFGCVWKAQLL--NEYVAVKIFPIQD-KQSWQNEYEVYSLPGMKHENILQFIGAEKRGT-SVDVDLW 98 (322)
T ss_dssp TEEEEEEEEEECSTTCEEEEEEET--TEEEEEEEECGGG-HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEEC-SSSEEEE
T ss_pred hhhchhhheecccCceEEEEEEEC--CCEEEEEEeecCc-hHHHHHHHHHHHHhcCCCCCchhhcceeccCC-CCCceEE
Confidence 467899999999999999999986 7999999996543 23345667999999999999999999987543 1133579
Q ss_pred eEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhC-------CCCCeEecCCCCCCeeecCC
Q 039533 705 SVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHD-------CQPVTAHCDLKPSNVLLDDY 777 (949)
Q Consensus 705 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~-------~~~~ivHrDlkp~NIll~~~ 777 (949)
+||||+++|+|.+++. ...+++..+..++.|++.||+|||+. ++++|+||||||+||+++.+
T Consensus 99 lv~e~~~~g~L~~~l~-----------~~~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~ 167 (322)
T 3soc_A 99 LITAFHEKGSLSDFLK-----------ANVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNN 167 (322)
T ss_dssp EEEECCTTCBHHHHHH-----------HCCBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTT
T ss_pred EEEecCCCCCHHHHHH-----------hcCCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCC
Confidence 9999999999999996 23489999999999999999999954 12389999999999999999
Q ss_pred CceEEeecccceecCCCCCccccccccCccCccCccccCC-----CccCCccchHHHHHHHHHHHhCCCCCccccccCch
Q 039533 778 MTARVGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVG-----CEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDIN 852 (949)
Q Consensus 778 ~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~ 852 (949)
+.+||+|||+++...............||+.|+|||++.+ ..++.++|||||||++|||+||+.||.........
T Consensus 168 ~~~kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~ 247 (322)
T 3soc_A 168 LTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYML 247 (322)
T ss_dssp CCEEECCCTTCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCC
T ss_pred CeEEEccCCcccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhcc
Confidence 9999999999988765544333334569999999999886 35678899999999999999999999754332111
Q ss_pred -hhhhcccc-CCCchhhh-cccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHH
Q 039533 853 -LHNFGRKA-LPDDVMDI-VDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHELQ 929 (949)
Q Consensus 853 -~~~~~~~~-~~~~~~~~-~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~ 929 (949)
+....... ..+...+. ......+...+ . .....++..+.+++.+||+.||++|||++||++.|+
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~-~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~ 314 (322)
T 3soc_A 248 PFEEEIGQHPSLEDMQEVVVHKKKRPVLRD------------Y-WQKHAGMAMLCETIEECWDHDAEARLSAGCVGERIT 314 (322)
T ss_dssp TTHHHHCSSCCHHHHHHHHTTSCCCCCCCG------------G-GGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred chhhhhccCCchhhhhhhhhcccCCCCccc------------c-ccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 11000000 00011111 11111111110 0 011245667999999999999999999999999999
Q ss_pred HhHHh
Q 039533 930 SIKNI 934 (949)
Q Consensus 930 ~i~~~ 934 (949)
++++.
T Consensus 315 ~l~~~ 319 (322)
T 3soc_A 315 QMQRL 319 (322)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 99875
No 55
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00 E-value=2e-40 Score=364.31 Aligned_cols=263 Identities=22% Similarity=0.244 Sum_probs=212.4
Q ss_pred ccccCHHHHHHHhcC----------CCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCCcchHHHHHHHHHHHhcCC
Q 039533 613 LLYLSYQDLYNATSG----------FSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHGASRSFIAECKALKSIRH 682 (949)
Q Consensus 613 ~~~~~~~~l~~~~~~----------y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h 682 (949)
...++++++..+++. |...+.||+|+||.||+|++..+++.||||+++.......+.+.+|+.++++++|
T Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h 101 (321)
T 2c30_A 22 SGVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQH 101 (321)
T ss_dssp ---CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCC
T ss_pred CCcCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCC
Confidence 345788888887764 6667799999999999999988899999999987666666789999999999999
Q ss_pred CcceeEEeeeecccccCCccceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCe
Q 039533 683 RNLVKVLTACLGADYRGNDFKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVT 762 (949)
Q Consensus 683 ~niv~~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~i 762 (949)
|||+++++++...+ ..++||||+++++|.+++. ...+++..+..++.|++.||+|||+. +|
T Consensus 102 ~niv~~~~~~~~~~-----~~~lv~e~~~~~~L~~~l~-----------~~~l~~~~~~~i~~qi~~~L~~LH~~---~i 162 (321)
T 2c30_A 102 FNVVEMYKSYLVGE-----ELWVLMEFLQGGALTDIVS-----------QVRLNEEQIATVCEAVLQALAYLHAQ---GV 162 (321)
T ss_dssp TTBCCEEEEEEETT-----EEEEEECCCCSCBHHHHHT-----------TCCCCHHHHHHHHHHHHHHHHHHHHT---TE
T ss_pred CCcceEEEEEEECC-----EEEEEEecCCCCCHHHHHH-----------hcCCCHHHHHHHHHHHHHHHHHHHHC---Ce
Confidence 99999999986544 7899999999999999986 23589999999999999999999987 99
Q ss_pred EecCCCCCCeeecCCCceEEeecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCC
Q 039533 763 AHCDLKPSNVLLDDYMTARVGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKP 842 (949)
Q Consensus 763 vHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~P 842 (949)
+||||||+||+++.++.+||+|||++.......... ....||+.|+|||++.+..++.++|||||||++|||++|+.|
T Consensus 163 vH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p 240 (321)
T 2c30_A 163 IHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKR--KSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPP 240 (321)
T ss_dssp ECCCCSGGGEEECTTCCEEECCCTTCEECCSSSCCB--CCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCT
T ss_pred ecCCCCHHHEEECCCCcEEEeeeeeeeecccCcccc--ccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCC
Confidence 999999999999999999999999998765543322 245699999999999999999999999999999999999999
Q ss_pred CccccccCchhhhhccccCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHH
Q 039533 843 IDIMFEGDINLHNFGRKALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMT 922 (949)
Q Consensus 843 f~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ 922 (949)
|...... ......... ..+.... ....+..+.+++.+|++.||++|||++
T Consensus 241 f~~~~~~--~~~~~~~~~--------~~~~~~~--------------------~~~~~~~l~~li~~~l~~dp~~Rps~~ 290 (321)
T 2c30_A 241 YFSDSPV--QAMKRLRDS--------PPPKLKN--------------------SHKVSPVLRDFLERMLVRDPQERATAQ 290 (321)
T ss_dssp TTTSCHH--HHHHHHHHS--------SCCCCTT--------------------GGGSCHHHHHHHHHHSCSSTTTSCCHH
T ss_pred CCCCCHH--HHHHHHhcC--------CCCCcCc--------------------cccCCHHHHHHHHHHccCChhhCcCHH
Confidence 9633111 000000000 0000000 012345678999999999999999999
Q ss_pred HHHH
Q 039533 923 NVVH 926 (949)
Q Consensus 923 ev~~ 926 (949)
|+++
T Consensus 291 ell~ 294 (321)
T 2c30_A 291 ELLD 294 (321)
T ss_dssp HHHT
T ss_pred HHhc
Confidence 9986
No 56
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00 E-value=1.1e-40 Score=373.57 Aligned_cols=272 Identities=21% Similarity=0.342 Sum_probs=212.4
Q ss_pred hcCCCCCCeeeeecCceEEEEEEc-------CCCEEEEEEEEecCCC-cchHHHHHHHHHHHhc-CCCcceeEEeeeecc
Q 039533 625 TSGFSSANLVGVGSFGSVYKGIID-------EGRTTIAVKVFNLQHH-GASRSFIAECKALKSI-RHRNLVKVLTACLGA 695 (949)
Q Consensus 625 ~~~y~~~~~lg~G~~g~Vy~~~~~-------~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~ 695 (949)
.++|.+.+.||+|+||.||+|++. .++..||||+++.... ...+.+.+|+++++++ +||||+++++++...
T Consensus 80 ~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~ 159 (370)
T 2psq_A 80 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 159 (370)
T ss_dssp GGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSS
T ss_pred HHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccC
Confidence 367889999999999999999974 3456899999975432 2346789999999999 899999999997654
Q ss_pred cccCCccceeEeeeccCCChhhhcCCCCCCCc------cccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCC
Q 039533 696 DYRGNDFKASVYEFMHYGSLEEWLHPFTGEDE------IDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKP 769 (949)
Q Consensus 696 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~------~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp 769 (949)
+ ..++||||+++|+|.+++........ .......+++.+++.++.||+.||+|||++ +|+||||||
T Consensus 160 ~-----~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp 231 (370)
T 2psq_A 160 G-----PLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAA 231 (370)
T ss_dssp S-----SCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCG
T ss_pred C-----CEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---Ceeccccch
Confidence 4 78999999999999999974321100 001234589999999999999999999987 999999999
Q ss_pred CCeeecCCCceEEeecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHh-CCCCCccccc
Q 039533 770 SNVLLDDYMTARVGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVI-GKKPIDIMFE 848 (949)
Q Consensus 770 ~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~ellt-g~~Pf~~~~~ 848 (949)
+||+++.++.+||+|||+++...............+|+.|+|||++.+..++.++|||||||++|||++ |+.||.....
T Consensus 232 ~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~ 311 (370)
T 2psq_A 232 RNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPV 311 (370)
T ss_dssp GGEEECTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCG
T ss_pred hhEEECCCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCH
Confidence 999999999999999999997765443333334457889999999999999999999999999999999 9999964321
Q ss_pred cCchhhhhccccCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHH
Q 039533 849 GDINLHNFGRKALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHEL 928 (949)
Q Consensus 849 ~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L 928 (949)
.. +...+........ ...++..+.+++.+||+.||++|||+.|+++.|
T Consensus 312 ~~--------------~~~~~~~~~~~~~------------------~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L 359 (370)
T 2psq_A 312 EE--------------LFKLLKEGHRMDK------------------PANCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 359 (370)
T ss_dssp GG--------------HHHHHHTTCCCCC------------------CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred HH--------------HHHHHhcCCCCCC------------------CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHH
Confidence 11 1111110000000 013345688999999999999999999999999
Q ss_pred HHhHHhhc
Q 039533 929 QSIKNILL 936 (949)
Q Consensus 929 ~~i~~~~~ 936 (949)
+++.....
T Consensus 360 ~~il~~~~ 367 (370)
T 2psq_A 360 DRILTLTT 367 (370)
T ss_dssp HHHHHHHC
T ss_pred HHHHHHhc
Confidence 99876543
No 57
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00 E-value=1.6e-41 Score=368.91 Aligned_cols=276 Identities=22% Similarity=0.340 Sum_probs=209.3
Q ss_pred hcCCCCCCeeeeecCceEEEEE----EcCCCEEEEEEEEecCCCcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCC
Q 039533 625 TSGFSSANLVGVGSFGSVYKGI----IDEGRTTIAVKVFNLQHHGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGN 700 (949)
Q Consensus 625 ~~~y~~~~~lg~G~~g~Vy~~~----~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 700 (949)
.++|++.+.||+|+||+||+|+ ...+++.||||++........+.+.+|++++++++||||+++++++...+ .
T Consensus 9 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~---~ 85 (295)
T 3ugc_A 9 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAG---R 85 (295)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHH---H
T ss_pred HHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCC---C
Confidence 3678899999999999999998 45578999999998665555678999999999999999999999976432 2
Q ss_pred ccceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCce
Q 039533 701 DFKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTA 780 (949)
Q Consensus 701 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~ 780 (949)
...++||||+++|+|.+++.. ....+++.++..++.|++.||+|||++ +|+||||||+||+++.++.+
T Consensus 86 ~~~~lv~e~~~~~~L~~~l~~---------~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~ 153 (295)
T 3ugc_A 86 RNLKLIMEYLPYGSLRDYLQK---------HKERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRV 153 (295)
T ss_dssp TSCEEEEECCTTCBHHHHHHH---------CGGGCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEE
T ss_pred CceEEEEEeCCCCCHHHHHHh---------cccccCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHhhEEEcCCCeE
Confidence 357999999999999999962 234589999999999999999999987 99999999999999999999
Q ss_pred EEeecccceecCCCCCc-cccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhccc
Q 039533 781 RVGDFGLARILSPDHTQ-TSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRK 859 (949)
Q Consensus 781 kl~DfG~a~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~ 859 (949)
||+|||+++........ .......++..|+|||++.+..++.++||||||+++|||+||..||....... ......
T Consensus 154 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~---~~~~~~ 230 (295)
T 3ugc_A 154 KIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEF---MRMIGN 230 (295)
T ss_dssp EECCCCSCC-------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHH---HHHHCT
T ss_pred EEccCcccccccCCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHH---HhhhcC
Confidence 99999999876544321 12223447788999999998899999999999999999999999986432110 000000
Q ss_pred cCCC-----chhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHHhHHh
Q 039533 860 ALPD-----DVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHELQSIKNI 934 (949)
Q Consensus 860 ~~~~-----~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~~~ 934 (949)
.... ...+.+... .+.+....++..+.+++.+||+.||++|||++|+++.|+++++.
T Consensus 231 ~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l~~~ 292 (295)
T 3ugc_A 231 DKQGQMIVFHLIELLKNN------------------GRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDN 292 (295)
T ss_dssp TCCTHHHHHHHHHHHHTT------------------CCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred ccccchhHHHHHHHHhcc------------------CcCCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHh
Confidence 0000 000011000 01111124456789999999999999999999999999999887
Q ss_pred hc
Q 039533 935 LL 936 (949)
Q Consensus 935 ~~ 936 (949)
+.
T Consensus 293 l~ 294 (295)
T 3ugc_A 293 MA 294 (295)
T ss_dssp --
T ss_pred cc
Confidence 54
No 58
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00 E-value=1.2e-40 Score=363.93 Aligned_cols=264 Identities=27% Similarity=0.362 Sum_probs=199.5
Q ss_pred HHhcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCC--cchHHHHHHHHHHHhcCCCcceeEEeeeecccccCC
Q 039533 623 NATSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHH--GASRSFIAECKALKSIRHRNLVKVLTACLGADYRGN 700 (949)
Q Consensus 623 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 700 (949)
...++|++.+.||+|+||+||+|++. ++.||||++..... ...+++.+|++++++++||||+++++++...+
T Consensus 34 i~~~~y~i~~~lG~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~---- 107 (309)
T 3p86_A 34 IPWCDLNIKEKIGAGSFGTVHRAEWH--GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPP---- 107 (309)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEET--TEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTT----
T ss_pred CChhHceeeeEeecCCCeEEEEEEEC--CCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECC----
Confidence 34567899999999999999999874 78999999975443 23357889999999999999999999976544
Q ss_pred ccceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCC--eEecCCCCCCeeecCCC
Q 039533 701 DFKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPV--TAHCDLKPSNVLLDDYM 778 (949)
Q Consensus 701 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~--ivHrDlkp~NIll~~~~ 778 (949)
..++||||+++|+|.+++.... ....+++..++.++.|++.||+|||++ + |+||||||+||+++.++
T Consensus 108 -~~~lv~e~~~~~~L~~~l~~~~-------~~~~~~~~~~~~i~~qi~~aL~~LH~~---~~~ivH~Dikp~NIll~~~~ 176 (309)
T 3p86_A 108 -NLSIVTEYLSRGSLYRLLHKSG-------AREQLDERRRLSMAYDVAKGMNYLHNR---NPPIVHRNLKSPNLLVDKKY 176 (309)
T ss_dssp -CCEEEEECCTTCBHHHHHHSTT-------HHHHSCHHHHHHHHHHHHHHHHHHHTS---SSCCCCTTCCGGGEEECTTC
T ss_pred -ceEEEEecCCCCcHHHHHhhcC-------CCCCCCHHHHHHHHHHHHHHHHHHHcC---CCCEECCCCChhhEEEeCCC
Confidence 7899999999999999997211 123489999999999999999999977 7 99999999999999999
Q ss_pred ceEEeecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhcc
Q 039533 779 TARVGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGR 858 (949)
Q Consensus 779 ~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~ 858 (949)
.+||+|||+++........ .....||+.|+|||++.+..++.++|||||||++|||++|+.||........ .....
T Consensus 177 ~~kL~Dfg~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~~~--~~~~~ 252 (309)
T 3p86_A 177 TVKVCDFGLSRLKASTFLS--SKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQV--VAAVG 252 (309)
T ss_dssp CEEECCCC-------------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHHHH--HHHHH
T ss_pred cEEECCCCCCccccccccc--cccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH--HHHHH
Confidence 9999999999865443221 1235699999999999999999999999999999999999999964321110 00000
Q ss_pred ccCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHHhHHhhc
Q 039533 859 KALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHELQSIKNILL 936 (949)
Q Consensus 859 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~~~~~ 936 (949)
. ....... ...++..+.+++.+||+.||++|||++|+++.|+.+.+...
T Consensus 253 ~----------~~~~~~~-------------------~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~~~~ 301 (309)
T 3p86_A 253 F----------KCKRLEI-------------------PRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKSAV 301 (309)
T ss_dssp H----------SCCCCCC-------------------CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC---
T ss_pred h----------cCCCCCC-------------------CccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhCC
Confidence 0 0000000 01234568899999999999999999999999999876643
No 59
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00 E-value=1.3e-40 Score=363.31 Aligned_cols=265 Identities=28% Similarity=0.429 Sum_probs=203.1
Q ss_pred hcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCC--cchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCcc
Q 039533 625 TSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHH--GASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDF 702 (949)
Q Consensus 625 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 702 (949)
.++|.+.+.||+|+||.||+|++. ..+|+|+++.... ...+.+.+|++++++++||||+++++++.. +.
T Consensus 35 ~~~~~~~~~lG~G~~g~Vy~~~~~---~~~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~------~~ 105 (307)
T 3lb7_A 35 ASEVMLSTRIGSGSFGTVYKGKWH---GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK------DN 105 (307)
T ss_dssp TTSCCEEEEEEECSSCEEEEEESS---SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS------SS
T ss_pred ccceEEEeEecCCCCeEEEEEEEC---CEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcc------Cc
Confidence 367899999999999999999875 3589998875433 234678999999999999999999998642 25
Q ss_pred ceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEE
Q 039533 703 KASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARV 782 (949)
Q Consensus 703 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl 782 (949)
.++||||+++++|.+++.. ....+++.++..|+.|++.||+|||++ +|+||||||+||+++.++.+||
T Consensus 106 ~~lv~e~~~~~~L~~~l~~---------~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl 173 (307)
T 3lb7_A 106 LAIVTQWCEGSSLYKHLHV---------QETKFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKI 173 (307)
T ss_dssp CEEEEECCSSCBHHHHHHT---------SCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCSSSEEECTTSCEEE
T ss_pred EEEEEecCCCCcHHHHHHh---------cccCCCHHHHHHHHHHHHHHHHHHHhC---CEeeCCCChhhEEEcCCCCEEE
Confidence 7899999999999999962 235689999999999999999999988 8999999999999999999999
Q ss_pred eecccceecCCCCCccccccccCccCccCccccC---CCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhccc
Q 039533 783 GDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGV---GCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRK 859 (949)
Q Consensus 783 ~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~ 859 (949)
+|||+++...............||+.|+|||++. +..++.++|||||||++|||++|+.||......+.........
T Consensus 174 ~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~~~~~ 253 (307)
T 3lb7_A 174 GDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRG 253 (307)
T ss_dssp CCCCSSCC------------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHHT
T ss_pred ccCCCceecccccccccccCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCCccCCcHHHHHHHHhcC
Confidence 9999998654332222223456999999999876 5568899999999999999999999996432221111100010
Q ss_pred cCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHHhHHhhcc
Q 039533 860 ALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHELQSIKNILLG 937 (949)
Q Consensus 860 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~~~~~~ 937 (949)
.......++ ...++..+.+++.+|++.+|++||++.||++.|+.+...+.+
T Consensus 254 ~~~~~~~~~---------------------------~~~~~~~l~~li~~~l~~~p~~RPs~~~il~~l~~l~~~~pk 304 (307)
T 3lb7_A 254 YASPDLSKL---------------------------YKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSLPK 304 (307)
T ss_dssp CCCCCSTTS---------------------------CSSSCHHHHHHHHHHSCSSSTTSCCHHHHHHHHHHHHTTCCC
T ss_pred CCCcchhhh---------------------------hcCCcHHHHHHHHHHhhCChhhCcCHHHHHHHHHHHHhhccc
Confidence 011000000 013345688999999999999999999999999999877643
No 60
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00 E-value=2.5e-40 Score=360.77 Aligned_cols=266 Identities=23% Similarity=0.361 Sum_probs=203.1
Q ss_pred hcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCCcchHHHHHHHHHHHh--cCCCcceeEEeeeecccccCCcc
Q 039533 625 TSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHGASRSFIAECKALKS--IRHRNLVKVLTACLGADYRGNDF 702 (949)
Q Consensus 625 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~~~~~~~~~~~~~~~~ 702 (949)
.++|++.+.||+|+||+||+|++ +++.||||++... ..+.+..|.+++.. ++||||+++++++.... .....
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~-~~~~~ 80 (301)
T 3q4u_A 7 ARDITLLECVGKGRYGEVWRGSW--QGENVAVKIFSSR---DEKSWFRETELYNTVMLRHENILGFIASDMTSR-HSSTQ 80 (301)
T ss_dssp GGGCEEEEEEEECSSEEEEEEEE--TTEEEEEEEECGG---GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEE-TTEEE
T ss_pred cCcEEEEEeeccCCCcEEEEEEE--CCEEEEEEEeccc---cchhhHHHHHHHHHhhccCcCeeeEEEeecccc-CCCce
Confidence 46899999999999999999998 4899999998643 34556677777777 78999999999876543 23446
Q ss_pred ceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHh--------hCCCCCeEecCCCCCCeee
Q 039533 703 KASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLH--------HDCQPVTAHCDLKPSNVLL 774 (949)
Q Consensus 703 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH--------~~~~~~ivHrDlkp~NIll 774 (949)
.++||||+++|+|.++++ ...+++..+..++.|++.||+||| +. +|+||||||+||++
T Consensus 81 ~~lv~e~~~~g~L~~~l~-----------~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~Nill 146 (301)
T 3q4u_A 81 LWLITHYHEMGSLYDYLQ-----------LTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKP---AIAHRDLKSKNILV 146 (301)
T ss_dssp EEEEECCCTTCBHHHHHT-----------TCCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBC---EEECSCCCGGGEEE
T ss_pred eEEehhhccCCCHHHHHh-----------hcccCHHHHHHHHHHHHHHHHHHHHhhhhccCCC---CeecCCCChHhEEE
Confidence 899999999999999996 235899999999999999999999 55 99999999999999
Q ss_pred cCCCceEEeecccceecCCCCCcc--ccccccCccCccCccccCCC------ccCCccchHHHHHHHHHHHhC-------
Q 039533 775 DDYMTARVGDFGLARILSPDHTQT--SSFSVKGSLGYIAPEYGVGC------EVSTNGDVYSYGILLLELVIG------- 839 (949)
Q Consensus 775 ~~~~~~kl~DfG~a~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~------~~~~~sDiwSlGvvl~elltg------- 839 (949)
+.++.+||+|||+|+......... ......||+.|+|||++.+. .++.++|||||||++|||+||
T Consensus 147 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~ 226 (301)
T 3q4u_A 147 KKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIV 226 (301)
T ss_dssp CTTSCEEECCCTTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBC
T ss_pred cCCCCEEEeeCCCeeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCcccc
Confidence 999999999999998765544321 11234699999999998876 566899999999999999999
Q ss_pred ---CCCCccccccCchhhhhccccCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCC
Q 039533 840 ---KKPIDIMFEGDINLHNFGRKALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQ 916 (949)
Q Consensus 840 ---~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~ 916 (949)
+.||................... + ...+... .. .....++..+.+++.+||+.||+
T Consensus 227 ~~~~~pf~~~~~~~~~~~~~~~~~~~-------~-~~~~~~~-----------~~--~~~~~~~~~l~~li~~cl~~dP~ 285 (301)
T 3q4u_A 227 EDYKPPFYDVVPNDPSFEDMRKVVCV-------D-QQRPNIP-----------NR--WFSDPTLTSLAKLMKECWYQNPS 285 (301)
T ss_dssp CCCCCTTTTTSCSSCCHHHHHHHHTT-------S-CCCCCCC-----------GG--GGGSHHHHHHHHHHHHHCCSSGG
T ss_pred ccccccccccCCCCcchhhhhHHHhc-------c-CCCCCCC-----------hh--hccCccHHHHHHHHHHHhhcChh
Confidence 66664332222111111100000 0 0000000 00 00124577899999999999999
Q ss_pred CCCCHHHHHHHHHHh
Q 039533 917 DRTNMTNVVHELQSI 931 (949)
Q Consensus 917 ~RPs~~ev~~~L~~i 931 (949)
+|||++||++.|++|
T Consensus 286 ~Rps~~~i~~~L~~i 300 (301)
T 3q4u_A 286 ARLTALRIKKTLTKI 300 (301)
T ss_dssp GSCCHHHHHHHHHHH
T ss_pred hCCCHHHHHHHHhcc
Confidence 999999999999986
No 61
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00 E-value=1.4e-40 Score=365.78 Aligned_cols=255 Identities=20% Similarity=0.293 Sum_probs=203.1
Q ss_pred hcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCC-cchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCccc
Q 039533 625 TSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHH-GASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFK 703 (949)
Q Consensus 625 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 703 (949)
.++|++.+.||+|+||.||+|++..+++.||||++..... ...+.+.+|+.++++++||||+++++++...+ ..
T Consensus 6 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~-----~~ 80 (323)
T 3tki_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGN-----IQ 80 (323)
T ss_dssp TTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSS-----EE
T ss_pred hhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCC-----eE
Confidence 3689999999999999999999998999999999975432 23456889999999999999999999976544 78
Q ss_pred eeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEe
Q 039533 704 ASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVG 783 (949)
Q Consensus 704 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~ 783 (949)
++||||+++|+|.+++. ....+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+
T Consensus 81 ~lv~e~~~~~~L~~~l~----------~~~~~~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~ 147 (323)
T 3tki_A 81 YLFLEYCSGGELFDRIE----------PDIGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKIS 147 (323)
T ss_dssp EEEEECCTTEEGGGGSB----------TTTBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEEC
T ss_pred EEEEEcCCCCcHHHHHh----------hcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccccchHHEEEeCCCCEEEE
Confidence 99999999999999996 234589999999999999999999987 99999999999999999999999
Q ss_pred ecccceecCCCCCccccccccCccCccCccccCCCcc-CCccchHHHHHHHHHHHhCCCCCccccccCchhhhhccccCC
Q 039533 784 DFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEV-STNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKALP 862 (949)
Q Consensus 784 DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~ 862 (949)
|||+++.+.............||+.|+|||++.+..+ +.++|||||||++|||++|+.||+...........+...
T Consensus 148 Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~--- 224 (323)
T 3tki_A 148 DFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEK--- 224 (323)
T ss_dssp CCTTCEECEETTEECCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHHHHHHHTT---
T ss_pred EeeccceeccCCcccccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhcc---
Confidence 9999987654433222234569999999999987765 789999999999999999999997543322222111111
Q ss_pred CchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHH
Q 039533 863 DDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHE 927 (949)
Q Consensus 863 ~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 927 (949)
.....+ ....+..+.+++.+|++.||++|||++|+++.
T Consensus 225 ---------~~~~~~------------------~~~~~~~~~~li~~~L~~dP~~R~t~~eil~h 262 (323)
T 3tki_A 225 ---------KTYLNP------------------WKKIDSAPLALLHKILVENPSARITIPDIKKD 262 (323)
T ss_dssp ---------CTTSTT------------------GGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred ---------cccCCc------------------cccCCHHHHHHHHHHccCChhhCcCHHHHhhC
Confidence 000000 01234557889999999999999999999763
No 62
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00 E-value=2.4e-41 Score=380.35 Aligned_cols=262 Identities=24% Similarity=0.339 Sum_probs=209.5
Q ss_pred hcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCC-cchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCccc
Q 039533 625 TSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHH-GASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFK 703 (949)
Q Consensus 625 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 703 (949)
.++|.+.+.||+|+||.||+|++..+++.||||+++.... ...+.+.+|++++++++||||+++++++...+ ..
T Consensus 113 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~-----~~ 187 (377)
T 3cbl_A 113 HEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQ-----PI 187 (377)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSS-----SC
T ss_pred hHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCC-----Cc
Confidence 3568888999999999999999988899999999874432 22356889999999999999999999986544 78
Q ss_pred eeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEe
Q 039533 704 ASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVG 783 (949)
Q Consensus 704 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~ 783 (949)
++||||+++|+|.+++.. ....+++.++..++.|++.||+|||++ +|+||||||+||+++.++.+||+
T Consensus 188 ~lv~e~~~~g~L~~~l~~---------~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nil~~~~~~~kl~ 255 (377)
T 3cbl_A 188 YIVMELVQGGDFLTFLRT---------EGARLRVKTLLQMVGDAAAGMEYLESK---CCIHRDLAARNCLVTEKNVLKIS 255 (377)
T ss_dssp EEEEECCTTCBHHHHHHH---------HGGGCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEEC
T ss_pred EEEEEcCCCCCHHHHHHh---------cCCCCCHHHHHHHHHHHHHHHHHHHHC---CcCCcccCHHHEEEcCCCcEEEC
Confidence 999999999999999962 234589999999999999999999988 89999999999999999999999
Q ss_pred ecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHh-CCCCCccccccCchhhhhccccCC
Q 039533 784 DFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVI-GKKPIDIMFEGDINLHNFGRKALP 862 (949)
Q Consensus 784 DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~ 862 (949)
|||+++...............++..|+|||++.+..++.++|||||||++|||+| |+.||.......
T Consensus 256 DfG~s~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~~------------ 323 (377)
T 3cbl_A 256 DFGMSREEADGVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQ------------ 323 (377)
T ss_dssp CGGGCEECTTSEEECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHHH------------
T ss_pred cCCCceecCCCceeecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH------------
Confidence 9999987544322211112235778999999998899999999999999999998 999996432111
Q ss_pred CchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHHhHHhh
Q 039533 863 DDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHELQSIKNIL 935 (949)
Q Consensus 863 ~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~~~~ 935 (949)
..+.+...... +....++..+.+++.+||+.||++|||++||++.|+++++..
T Consensus 324 --~~~~~~~~~~~------------------~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i~~~~ 376 (377)
T 3cbl_A 324 --TREFVEKGGRL------------------PCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIRKRH 376 (377)
T ss_dssp --HHHHHHTTCCC------------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred --HHHHHHcCCCC------------------CCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHhhc
Confidence 01111110000 000123556889999999999999999999999999998753
No 63
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00 E-value=9.6e-41 Score=367.53 Aligned_cols=262 Identities=23% Similarity=0.382 Sum_probs=206.9
Q ss_pred cCCCCCCeeeeecCceEEEEEEcCC---CEEEEEEEEecCCC-cchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCc
Q 039533 626 SGFSSANLVGVGSFGSVYKGIIDEG---RTTIAVKVFNLQHH-GASRSFIAECKALKSIRHRNLVKVLTACLGADYRGND 701 (949)
Q Consensus 626 ~~y~~~~~lg~G~~g~Vy~~~~~~~---~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 701 (949)
++|++.+.||+|+||.||+|++..+ +..||||+++.... ...+.+.+|+.++++++||||+++++++....
T Consensus 49 ~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~----- 123 (325)
T 3kul_A 49 SRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGR----- 123 (325)
T ss_dssp GGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGG-----
T ss_pred hHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCC-----
Confidence 5688889999999999999999743 45699999975432 33467899999999999999999999976544
Q ss_pred cceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceE
Q 039533 702 FKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTAR 781 (949)
Q Consensus 702 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~k 781 (949)
..++||||+++|+|.+++.. ....+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+|
T Consensus 124 ~~~lv~e~~~~~~L~~~l~~---------~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~k 191 (325)
T 3kul_A 124 LAMIVTEYMENGSLDTFLRT---------HDGQFTIMQLVGMLRGVGAGMRYLSDL---GYVHRDLAARNVLVDSNLVCK 191 (325)
T ss_dssp CCEEEEECCTTCBHHHHHHT---------TTTCSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEE
T ss_pred ccEEEeeCCCCCcHHHHHHh---------cccCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEECCCCCEE
Confidence 78999999999999999962 234689999999999999999999987 899999999999999999999
Q ss_pred EeecccceecCCCCCcc-ccccccCccCccCccccCCCccCCccchHHHHHHHHHHHh-CCCCCccccccCchhhhhccc
Q 039533 782 VGDFGLARILSPDHTQT-SSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVI-GKKPIDIMFEGDINLHNFGRK 859 (949)
Q Consensus 782 l~DfG~a~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~ellt-g~~Pf~~~~~~~~~~~~~~~~ 859 (949)
|+|||+++......... ......+|+.|+|||++.+..++.++|||||||++|||++ |+.||....... ....
T Consensus 192 l~Dfg~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~--~~~~--- 266 (325)
T 3kul_A 192 VSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRD--VISS--- 266 (325)
T ss_dssp ECCCSSCEECC----CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHHH--HHHH---
T ss_pred ECCCCcccccccCccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHHH--HHHH---
Confidence 99999999876543211 1123346788999999998899999999999999999999 999996432111 0000
Q ss_pred cCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHHhHHhhc
Q 039533 860 ALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHELQSIKNILL 936 (949)
Q Consensus 860 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~~~~~ 936 (949)
+......+. ...++..+.+++.+||+.||++|||+.||++.|+++.+...
T Consensus 267 --------~~~~~~~~~-------------------~~~~~~~l~~li~~~l~~dp~~Rps~~eil~~L~~l~~~~~ 316 (325)
T 3kul_A 267 --------VEEGYRLPA-------------------PMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALIRSPE 316 (325)
T ss_dssp --------HHTTCCCCC-------------------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSCC
T ss_pred --------HHcCCCCCC-------------------CCCcCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhCcc
Confidence 000000000 01334568899999999999999999999999999977644
No 64
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00 E-value=1.3e-40 Score=366.11 Aligned_cols=250 Identities=20% Similarity=0.277 Sum_probs=203.2
Q ss_pred HhcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCC--cchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCc
Q 039533 624 ATSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHH--GASRSFIAECKALKSIRHRNLVKVLTACLGADYRGND 701 (949)
Q Consensus 624 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 701 (949)
..++|++.+.||+|+||.||+|++..+++.||||++..... ...+++.+|++++++++||||+++++++....
T Consensus 13 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~----- 87 (328)
T 3fe3_A 13 HIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEK----- 87 (328)
T ss_dssp EETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSS-----
T ss_pred ccCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECC-----
Confidence 45689999999999999999999988999999999975432 33467889999999999999999999976544
Q ss_pred cceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceE
Q 039533 702 FKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTAR 781 (949)
Q Consensus 702 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~k 781 (949)
..++||||+++|+|.+++. ....+++.++..++.|++.||+|||++ +|+||||||+||+++.++.+|
T Consensus 88 ~~~lv~e~~~~~~L~~~l~----------~~~~l~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~NIll~~~~~~k 154 (328)
T 3fe3_A 88 TLYLIMEYASGGEVFDYLV----------AHGRMKEKEARSKFRQIVSAVQYCHQK---RIVHRDLKAENLLLDADMNIK 154 (328)
T ss_dssp EEEEEECCCTTCBHHHHHH----------HHCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEE
T ss_pred EEEEEEECCCCCcHHHHHH----------HcCCCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCCHHHEEEcCCCCEE
Confidence 7899999999999999986 234589999999999999999999987 999999999999999999999
Q ss_pred EeecccceecCCCCCccccccccCccCccCccccCCCccC-CccchHHHHHHHHHHHhCCCCCccccccCchhhhhcccc
Q 039533 782 VGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVS-TNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKA 860 (949)
Q Consensus 782 l~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~ 860 (949)
|+|||+++........ ....||+.|+|||++.+..++ .++||||+||++|||++|+.||+...... ...
T Consensus 155 l~DFG~a~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~--~~~----- 224 (328)
T 3fe3_A 155 IADFGFSNEFTVGGKL---DAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKE--LRE----- 224 (328)
T ss_dssp ECSTTCCGGGSSSCGG---GTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSHHH--HHH-----
T ss_pred EeeccCceecCCCCcc---ccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCHHH--HHH-----
Confidence 9999999876544332 245699999999999888765 89999999999999999999996432110 000
Q ss_pred CCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHH
Q 039533 861 LPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHE 927 (949)
Q Consensus 861 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 927 (949)
.+..... ..+ ...+..+.+++.+|++.||++|||++|+++.
T Consensus 225 ------~i~~~~~-~~p-------------------~~~s~~~~~li~~~L~~dP~~R~t~~eil~h 265 (328)
T 3fe3_A 225 ------RVLRGKY-RIP-------------------FYMSTDCENLLKRFLVLNPIKRGTLEQIMKD 265 (328)
T ss_dssp ------HHHHCCC-CCC-------------------TTSCHHHHHHHHHHCCSSTTTSCCHHHHTTC
T ss_pred ------HHHhCCC-CCC-------------------CCCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 0000000 000 0123457889999999999999999999763
No 65
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00 E-value=6e-40 Score=364.99 Aligned_cols=252 Identities=20% Similarity=0.237 Sum_probs=203.9
Q ss_pred hcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCCc------chHHHHHHHHHHHhcCCCcceeEEeeeeccccc
Q 039533 625 TSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHG------ASRSFIAECKALKSIRHRNLVKVLTACLGADYR 698 (949)
Q Consensus 625 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 698 (949)
.++|.+.+.||+|+||.||+|++..+++.||+|+++..... ..+.+.+|+.++++++||||+++++++....
T Consensus 11 ~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~-- 88 (361)
T 2yab_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRT-- 88 (361)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSS--
T ss_pred hhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCC--
Confidence 46799999999999999999999989999999999754322 2467899999999999999999999976544
Q ss_pred CCccceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCC
Q 039533 699 GNDFKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYM 778 (949)
Q Consensus 699 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~ 778 (949)
..++||||+++|+|.+++. ....+++.++..++.||+.||+|||++ +|+||||||+||+++.++
T Consensus 89 ---~~~lv~e~~~gg~L~~~l~----------~~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~ 152 (361)
T 2yab_A 89 ---DVVLILELVSGGELFDFLA----------QKESLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKN 152 (361)
T ss_dssp ---EEEEEEECCCSCBHHHHHT----------TCSCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTT
T ss_pred ---EEEEEEEcCCCCcHHHHHH----------hcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEeCCC
Confidence 7899999999999999996 234689999999999999999999987 999999999999998776
Q ss_pred ----ceEEeecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccccccCchhh
Q 039533 779 ----TARVGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLH 854 (949)
Q Consensus 779 ----~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~ 854 (949)
.+||+|||+++......... ...||+.|+|||++.+..++.++||||+||++|+|++|..||....... .+
T Consensus 153 ~~~~~vkl~DFG~a~~~~~~~~~~---~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~~-~~- 227 (361)
T 2yab_A 153 IPIPHIKLIDFGLAHEIEDGVEFK---NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE-TL- 227 (361)
T ss_dssp SSSCCEEECCCSSCEECCTTCCCC---CCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHH-HH-
T ss_pred CCccCEEEEecCCceEcCCCCccc---cCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHH-HH-
Confidence 79999999998876543322 3569999999999999899999999999999999999999996321110 00
Q ss_pred hhccccCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 039533 855 NFGRKALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVH 926 (949)
Q Consensus 855 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 926 (949)
..+......... +.....+..+.+++.+|+..||++|||+.|+++
T Consensus 228 -----------~~i~~~~~~~~~----------------~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~ 272 (361)
T 2yab_A 228 -----------ANITAVSYDFDE----------------EFFSQTSELAKDFIRKLLVKETRKRLTIQEALR 272 (361)
T ss_dssp -----------HHHHTTCCCCCH----------------HHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred -----------HHHHhcCCCCCc----------------hhccCCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 001110000000 001133456789999999999999999999874
No 66
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.1e-40 Score=368.54 Aligned_cols=252 Identities=25% Similarity=0.282 Sum_probs=195.8
Q ss_pred HhcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCC-cchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCcc
Q 039533 624 ATSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHH-GASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDF 702 (949)
Q Consensus 624 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 702 (949)
..++|++.+.||+|+||+||+|++..+++.||||++..... ...+.+.+|++++++++||||+++++++...+ .
T Consensus 8 l~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~-----~ 82 (347)
T 3zgw_A 8 LLKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLETAN-----K 82 (347)
T ss_dssp TTTTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC---CCHHHHHHHHHHTCCCTTBCCEEEEEECSS-----E
T ss_pred HhcCeEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccchHHHHHHHHHHHHHhCCCCCEeeEEEEEEeCC-----E
Confidence 35789999999999999999999998999999999975432 33467899999999999999999999976544 7
Q ss_pred ceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEE
Q 039533 703 KASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARV 782 (949)
Q Consensus 703 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl 782 (949)
.++||||+++|+|.+++. ....+++.++..++.|++.||+|||++ +|+||||||+||++++++.+||
T Consensus 83 ~~lv~E~~~gg~L~~~l~----------~~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~kL 149 (347)
T 3zgw_A 83 IFMVLEYCPGGELFDYII----------SQDRLSEEETRVVFRQIVSAVAYVHSQ---GYAHRDLKPENLLFDEYHKLKL 149 (347)
T ss_dssp EEEEEECCTTCBHHHHHH----------HHSSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEE
T ss_pred EEEEEeCCCCCCHHHHHH----------HcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCccHHHEEEcCCCCEEE
Confidence 899999999999999986 234689999999999999999999987 9999999999999999999999
Q ss_pred eecccceecCCCCCccccccccCccCccCccccCCCcc-CCccchHHHHHHHHHHHhCCCCCccccccCchhhhhccccC
Q 039533 783 GDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEV-STNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKAL 861 (949)
Q Consensus 783 ~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~ 861 (949)
+|||++.......... .....||+.|+|||++.+..+ +.++||||+||++|||++|+.||+...... ..
T Consensus 150 ~DFG~a~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~~--~~------- 219 (347)
T 3zgw_A 150 IDFGLCAKPKGNKDYH-LQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNVMA--LY------- 219 (347)
T ss_dssp CCCTTCBC---------------CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCCSSHHH--HH-------
T ss_pred EeccCcccccCCCCcc-ccccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHH--HH-------
Confidence 9999998654433211 123459999999999988775 899999999999999999999996421110 00
Q ss_pred CCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHH
Q 039533 862 PDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHE 927 (949)
Q Consensus 862 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 927 (949)
..+...... .+ ...+..+.+++.+|++.||++|||++|+++.
T Consensus 220 ----~~i~~~~~~-~p-------------------~~~s~~~~~li~~~L~~dP~~Rps~~eil~h 261 (347)
T 3zgw_A 220 ----KKIMRGKYD-VP-------------------KWLSPSSILLLQQMLQVDPKKRISMKNLLNH 261 (347)
T ss_dssp ----HHHHHTCCC-CC-------------------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHTC
T ss_pred ----HHHHcCCCC-CC-------------------CCCCHHHHHHHHHHcccCHhHCcCHHHHhcC
Confidence 001100000 00 0123456789999999999999999999874
No 67
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=5.9e-40 Score=360.25 Aligned_cols=252 Identities=21% Similarity=0.294 Sum_probs=205.2
Q ss_pred hcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCCcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCccce
Q 039533 625 TSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFKA 704 (949)
Q Consensus 625 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 704 (949)
.++|++.+.||+|+||.||+|.+..+++.||+|++.... .....+.+|+.++++++||||+++++++...+ ..+
T Consensus 4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~-----~~~ 77 (321)
T 1tki_A 4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG-TDQVLVKKEISILNIARHRNILHLHESFESME-----ELV 77 (321)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT-HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETT-----EEE
T ss_pred hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCc-ccHHHHHHHHHHHHhCCCCCCCeEeEEEecCC-----EEE
Confidence 468999999999999999999999999999999987443 33467889999999999999999999976544 789
Q ss_pred eEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecC--CCceEE
Q 039533 705 SVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDD--YMTARV 782 (949)
Q Consensus 705 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~--~~~~kl 782 (949)
+||||+++|+|.+++.. ....+++.++..++.|++.||+|||++ +|+||||||+||+++. ++.+||
T Consensus 78 lv~e~~~g~~L~~~l~~---------~~~~~~~~~~~~i~~qi~~al~~lH~~---givH~Dlkp~NIl~~~~~~~~~kl 145 (321)
T 1tki_A 78 MIFEFISGLDIFERINT---------SAFELNEREIVSYVHQVCEALQFLHSH---NIGHFDIRPENIIYQTRRSSTIKI 145 (321)
T ss_dssp EEECCCCCCBHHHHHTS---------SSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEE
T ss_pred EEEEeCCCCCHHHHHHh---------cCCCCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEccCCCCCEEE
Confidence 99999999999999962 234689999999999999999999987 9999999999999987 789999
Q ss_pred eecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhccccCC
Q 039533 783 GDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKALP 862 (949)
Q Consensus 783 ~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~ 862 (949)
+|||+++......... ...||+.|+|||++.+..++.++|||||||++|||++|+.||....... .
T Consensus 146 ~Dfg~a~~~~~~~~~~---~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~--~--------- 211 (321)
T 1tki_A 146 IEFGQARQLKPGDNFR---LLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQ--I--------- 211 (321)
T ss_dssp CCCTTCEECCTTCEEE---EEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHH--H---------
T ss_pred EECCCCeECCCCCccc---cccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHHH--H---------
Confidence 9999999876544322 3458999999999999889999999999999999999999996432110 0
Q ss_pred CchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 039533 863 DDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVH 926 (949)
Q Consensus 863 ~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 926 (949)
...+......... ....+.+..+.+++.+|++.||++|||+.|+++
T Consensus 212 --~~~i~~~~~~~~~----------------~~~~~~s~~~~~li~~~L~~dp~~Rpt~~e~l~ 257 (321)
T 1tki_A 212 --IENIMNAEYTFDE----------------EAFKEISIEAMDFVDRLLVKERKSRMTASEALQ 257 (321)
T ss_dssp --HHHHHHTCCCCCH----------------HHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred --HHHHHcCCCCCCh----------------hhhccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 0111111111100 011133566889999999999999999999987
No 68
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00 E-value=2.7e-40 Score=358.76 Aligned_cols=263 Identities=21% Similarity=0.318 Sum_probs=205.4
Q ss_pred hcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCC---cchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCc
Q 039533 625 TSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHH---GASRSFIAECKALKSIRHRNLVKVLTACLGADYRGND 701 (949)
Q Consensus 625 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 701 (949)
.++|++.+.||+|+||.||+|++..+++.||+|++..... ...+.+.+|+.++++++||||+++++++...+
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~----- 84 (294)
T 4eqm_A 10 NERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDD----- 84 (294)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSS-----
T ss_pred hccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCC-----
Confidence 3579999999999999999999998999999999864432 23467889999999999999999999975444
Q ss_pred cceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceE
Q 039533 702 FKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTAR 781 (949)
Q Consensus 702 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~k 781 (949)
..++||||+++++|.+++. ....+++.++..++.|++.||+|||++ +|+||||||+||+++.++.+|
T Consensus 85 ~~~lv~e~~~g~~L~~~l~----------~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~k 151 (294)
T 4eqm_A 85 CYYLVMEYIEGPTLSEYIE----------SHGPLSVDTAINFTNQILDGIKHAHDM---RIVHRDIKPQNILIDSNKTLK 151 (294)
T ss_dssp EEEEEEECCCSCBHHHHHH----------HHCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEE
T ss_pred eEEEEEeCCCCCCHHHHHH----------hcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEE
Confidence 7899999999999999996 234689999999999999999999987 899999999999999999999
Q ss_pred EeecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhccccC
Q 039533 782 VGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKAL 861 (949)
Q Consensus 782 l~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~ 861 (949)
|+|||+++......... .....||+.|+|||++.+..++.++||||||+++|||++|+.||..........
T Consensus 152 l~Dfg~~~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~-------- 222 (294)
T 4eqm_A 152 IFDFGIAKALSETSLTQ-TNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIAI-------- 222 (294)
T ss_dssp ECCCSSSTTC--------------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHHHHH--------
T ss_pred EEeCCCccccccccccc-cCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHH--------
Confidence 99999998765433211 223459999999999999999999999999999999999999996432111000
Q ss_pred CCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCC-CHHHHHHHHHHhHHh
Q 039533 862 PDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRT-NMTNVVHELQSIKNI 934 (949)
Q Consensus 862 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-s~~ev~~~L~~i~~~ 934 (949)
..+...... .. .....+.+..+.+++.+|++.||++|| +++++.+.|+++...
T Consensus 223 -----~~~~~~~~~-~~--------------~~~~~~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~~~~ 276 (294)
T 4eqm_A 223 -----KHIQDSVPN-VT--------------TDVRKDIPQSLSNVILRATEKDKANRYKTIQEMKDDLSSVLHE 276 (294)
T ss_dssp -----HHHSSCCCC-HH--------------HHSCTTSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHTSSSS
T ss_pred -----HHhhccCCC-cc--------------hhcccCCCHHHHHHHHHHhcCCHhHccccHHHHHHHHHHHHhh
Confidence 000000000 00 000013356788999999999999999 999999999887544
No 69
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00 E-value=3.1e-40 Score=369.88 Aligned_cols=284 Identities=15% Similarity=0.214 Sum_probs=214.2
Q ss_pred HhcCCCCCCeeeeecCceEEEEEEcCC-----CEEEEEEEEecCCCcc-----------hHHHHHHHHHHHhcCCCccee
Q 039533 624 ATSGFSSANLVGVGSFGSVYKGIIDEG-----RTTIAVKVFNLQHHGA-----------SRSFIAECKALKSIRHRNLVK 687 (949)
Q Consensus 624 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~-----~~~vavK~~~~~~~~~-----------~~~~~~E~~~l~~l~h~niv~ 687 (949)
..++|++.+.||+|+||.||+|.+..+ ++.||||++....... ......|+..++.++||||++
T Consensus 33 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~ 112 (364)
T 3op5_A 33 AAAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPK 112 (364)
T ss_dssp TCCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCC
T ss_pred CCCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCe
Confidence 345899999999999999999999754 4789999987543211 123445566677778999999
Q ss_pred EEeeeecccccCCccceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCC
Q 039533 688 VLTACLGADYRGNDFKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDL 767 (949)
Q Consensus 688 ~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDl 767 (949)
+++++.... .+....++||||+ +++|.+++.. ....+++.+++.|+.|++.||+|||++ +|+||||
T Consensus 113 ~~~~~~~~~-~~~~~~~lv~e~~-g~~L~~~~~~---------~~~~l~~~~~~~i~~qi~~~l~~lH~~---~iiHrDl 178 (364)
T 3op5_A 113 YWGSGLHDK-NGKSYRFMIMDRF-GSDLQKIYEA---------NAKRFSRKTVLQLSLRILDILEYIHEH---EYVHGDI 178 (364)
T ss_dssp EEEEEEEEE-TTEEEEEEEEECE-EEEHHHHHHH---------TTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCC
T ss_pred EEeeeeecc-CCcceEEEEEeCC-CCCHHHHHHh---------ccCCCCHHHHHHHHHHHHHHHHHHHHC---CeEEecC
Confidence 999987543 2334689999999 9999999962 235699999999999999999999988 9999999
Q ss_pred CCCCeeec--CCCceEEeecccceecCCCCCcc-----ccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCC
Q 039533 768 KPSNVLLD--DYMTARVGDFGLARILSPDHTQT-----SSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGK 840 (949)
Q Consensus 768 kp~NIll~--~~~~~kl~DfG~a~~~~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~ 840 (949)
||+||+++ .++.+||+|||+|+.+....... ......||+.|+|||++.+..++.++|||||||++|||+||+
T Consensus 179 kp~Nill~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~ 258 (364)
T 3op5_A 179 KASNLLLNYKNPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGH 258 (364)
T ss_dssp CGGGEEEESSCTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSC
T ss_pred CHHHEEEecCCCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCC
Confidence 99999999 88999999999998765432211 112345999999999999999999999999999999999999
Q ss_pred CCCccccccCchhhhhccccCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCC
Q 039533 841 KPIDIMFEGDINLHNFGRKALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTN 920 (949)
Q Consensus 841 ~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs 920 (949)
.||....... .............+.++++..+.. ..++..+.+++..||+.||++||+
T Consensus 259 ~Pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~li~~cl~~~p~~RP~ 316 (364)
T 3op5_A 259 LPWEDNLKDP-KYVRDSKIRYRENIASLMDKCFPA---------------------ANAPGEIAKYMETVKLLDYTEKPL 316 (364)
T ss_dssp CTTGGGTTCH-HHHHHHHHHHHHCHHHHHHHHSCT---------------------TCCCHHHHHHHHHHHTCCTTCCCC
T ss_pred CCccccccCH-HHHHHHHHHhhhhHHHHHHHhccc---------------------ccCHHHHHHHHHHHhcCCCCCCCC
Confidence 9997432221 111111111111222222222211 123567899999999999999999
Q ss_pred HHHHHHHHHHhHHhhccCCCCCC
Q 039533 921 MTNVVHELQSIKNILLGVELCPP 943 (949)
Q Consensus 921 ~~ev~~~L~~i~~~~~~~~~~~~ 943 (949)
+++|++.|+++.+........++
T Consensus 317 ~~~l~~~l~~~~~~~~~~~~~~~ 339 (364)
T 3op5_A 317 YENLRDILLQGLKAIGSKDDGKL 339 (364)
T ss_dssp HHHHHHHHHHHHHHTTCCCCCCC
T ss_pred HHHHHHHHHHHHHHcCCCcCCcc
Confidence 99999999999888766654444
No 70
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00 E-value=2.1e-40 Score=371.10 Aligned_cols=282 Identities=22% Similarity=0.288 Sum_probs=216.8
Q ss_pred cCHHHHHHHhcCCCCCCeeeeecCceEEEEEE-----cCCCEEEEEEEEecCCC-cchHHHHHHHHHHHhc-CCCcceeE
Q 039533 616 LSYQDLYNATSGFSSANLVGVGSFGSVYKGII-----DEGRTTIAVKVFNLQHH-GASRSFIAECKALKSI-RHRNLVKV 688 (949)
Q Consensus 616 ~~~~~l~~~~~~y~~~~~lg~G~~g~Vy~~~~-----~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~~ 688 (949)
+...+.....++|.+.+.||+|+||.||+|++ ..+++.||||+++.... ...+.+.+|+++++++ +||||+++
T Consensus 12 ~~~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~ 91 (359)
T 3vhe_A 12 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNL 91 (359)
T ss_dssp CCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred CCcccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeee
Confidence 34455556678999999999999999999994 44668999999975433 2346799999999999 79999999
Q ss_pred EeeeecccccCCccceeEeeeccCCChhhhcCCCCCCCc-----------------------------------------
Q 039533 689 LTACLGADYRGNDFKASVYEFMHYGSLEEWLHPFTGEDE----------------------------------------- 727 (949)
Q Consensus 689 ~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~----------------------------------------- 727 (949)
++++...+ ...++||||+++|+|.+++........
T Consensus 92 ~~~~~~~~----~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (359)
T 3vhe_A 92 LGACTKPG----GPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGF 167 (359)
T ss_dssp EEEECSTT----SCCEEEEECCTTEEHHHHHHTTTTSBCSCC--------------------------------------
T ss_pred eeeeecCC----CceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCcccccccccc
Confidence 99986433 358999999999999999975322100
Q ss_pred ---------------cccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEeecccceecC
Q 039533 728 ---------------IDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVGDFGLARILS 792 (949)
Q Consensus 728 ---------------~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~ 792 (949)
.......+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++...
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~ 244 (359)
T 3vhe_A 168 VEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIY 244 (359)
T ss_dssp ----------------CTTTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCGGGSCTT
T ss_pred ccccccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEEcCCCcEEEEeccceeeec
Confidence 000122389999999999999999999988 89999999999999999999999999998765
Q ss_pred CCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHh-CCCCCccccccCchhhhhccccCCCchhhhccc
Q 039533 793 PDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVI-GKKPIDIMFEGDINLHNFGRKALPDDVMDIVDS 871 (949)
Q Consensus 793 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 871 (949)
............||+.|+|||++.+..++.++|||||||++|||+| |+.||........ .. ..+..
T Consensus 245 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~-~~------------~~~~~ 311 (359)
T 3vhe_A 245 KDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE-FC------------RRLKE 311 (359)
T ss_dssp SCTTCEEC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHH-HH------------HHHHH
T ss_pred ccccchhccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhHH-HH------------HHHHc
Confidence 5444333334568899999999998899999999999999999998 9999964322111 00 00000
Q ss_pred CCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHHhHHhh
Q 039533 872 SLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHELQSIKNIL 935 (949)
Q Consensus 872 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~~~~ 935 (949)
...... ....+..+.+++.+|++.||++|||++||++.|+++.+..
T Consensus 312 ~~~~~~------------------~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~ 357 (359)
T 3vhe_A 312 GTRMRA------------------PDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQAN 357 (359)
T ss_dssp TCCCCC------------------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred CCCCCC------------------CCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHHHh
Confidence 000000 0022446789999999999999999999999999988753
No 71
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00 E-value=9.7e-41 Score=373.74 Aligned_cols=270 Identities=24% Similarity=0.349 Sum_probs=208.7
Q ss_pred hcCCCCCCeeeeecCceEEEEEE-----cCCCEEEEEEEEecCC-CcchHHHHHHHHHHHhcCCCcceeEEeeeeccccc
Q 039533 625 TSGFSSANLVGVGSFGSVYKGII-----DEGRTTIAVKVFNLQH-HGASRSFIAECKALKSIRHRNLVKVLTACLGADYR 698 (949)
Q Consensus 625 ~~~y~~~~~lg~G~~g~Vy~~~~-----~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 698 (949)
.++|++.+.||+|+||.||+|++ ..+++.||||+++... .....++.+|+.++++++||||+++++++....
T Consensus 70 ~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~-- 147 (367)
T 3l9p_A 70 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSL-- 147 (367)
T ss_dssp GGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS--
T ss_pred HhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCC--
Confidence 35788899999999999999994 4467899999986432 233457889999999999999999999976544
Q ss_pred CCccceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCC
Q 039533 699 GNDFKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYM 778 (949)
Q Consensus 699 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~ 778 (949)
..++||||+++|+|.+++...... ......+++.+++.++.|++.||+|||++ +|+||||||+||+++.++
T Consensus 148 ---~~~lv~e~~~~g~L~~~l~~~~~~---~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~ 218 (367)
T 3l9p_A 148 ---PRFILLELMAGGDLKSFLRETRPR---PSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPG 218 (367)
T ss_dssp ---SCEEEEECCTTEEHHHHHHHHSCC---SSSCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSS
T ss_pred ---CCEEEEEeCCCCCHHHHHHhhccc---cCccccccHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEEecCC
Confidence 679999999999999999732211 12335689999999999999999999988 999999999999999554
Q ss_pred ---ceEEeecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHh-CCCCCccccccCchhh
Q 039533 779 ---TARVGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVI-GKKPIDIMFEGDINLH 854 (949)
Q Consensus 779 ---~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~ellt-g~~Pf~~~~~~~~~~~ 854 (949)
.+||+|||+|+...............||+.|+|||++.+..++.++|||||||++|||++ |..||....... .
T Consensus 219 ~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~~~--~- 295 (367)
T 3l9p_A 219 PGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQE--V- 295 (367)
T ss_dssp TTCCEEECCCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHH--H-
T ss_pred CCceEEECCCccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHH--H-
Confidence 599999999986533322222223458999999999988899999999999999999998 999996432111 1
Q ss_pred hhccccCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHHhHHh
Q 039533 855 NFGRKALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHELQSIKNI 934 (949)
Q Consensus 855 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~~~ 934 (949)
.+.+........ ...++..+.+++.+||+.||++|||++||++.|+.+.+.
T Consensus 296 -----------~~~i~~~~~~~~------------------~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~~~ 346 (367)
T 3l9p_A 296 -----------LEFVTSGGRMDP------------------PKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQD 346 (367)
T ss_dssp -----------HHHHHTTCCCCC------------------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred -----------HHHHHcCCCCCC------------------CccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhhC
Confidence 011110000000 012345688999999999999999999999999998776
Q ss_pred hcc
Q 039533 935 LLG 937 (949)
Q Consensus 935 ~~~ 937 (949)
...
T Consensus 347 ~~~ 349 (367)
T 3l9p_A 347 PDV 349 (367)
T ss_dssp HHH
T ss_pred hhh
Confidence 543
No 72
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.3e-39 Score=358.79 Aligned_cols=251 Identities=20% Similarity=0.248 Sum_probs=202.8
Q ss_pred cCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCCc------chHHHHHHHHHHHhcCCCcceeEEeeeecccccC
Q 039533 626 SGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHG------ASRSFIAECKALKSIRHRNLVKVLTACLGADYRG 699 (949)
Q Consensus 626 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 699 (949)
++|.+.+.||+|+||.||+|.+..+++.||+|+++..... ..+.+.+|+.++++++||||+++++++....
T Consensus 11 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~--- 87 (326)
T 2y0a_A 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKT--- 87 (326)
T ss_dssp HHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSS---
T ss_pred cceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCC---
Confidence 4688999999999999999999989999999999754321 3467899999999999999999999976544
Q ss_pred CccceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCC-
Q 039533 700 NDFKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYM- 778 (949)
Q Consensus 700 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~- 778 (949)
..++||||+++++|.+++. ....+++.++..++.|++.||+|||+. +|+||||||+||+++.++
T Consensus 88 --~~~lv~e~~~~~~L~~~l~----------~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~ 152 (326)
T 2y0a_A 88 --DVILILELVAGGELFDFLA----------EKESLTEEEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNV 152 (326)
T ss_dssp --EEEEEEECCCSCBHHHHHT----------TSSCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCSSS
T ss_pred --EEEEEEEcCCCCCHHHHHH----------hcCCcCHHHHHHHHHHHHHHHHHHHHC---CeEcCCCCHHHEEEecCCC
Confidence 7899999999999999996 234689999999999999999999987 999999999999999877
Q ss_pred ---ceEEeecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhh
Q 039533 779 ---TARVGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHN 855 (949)
Q Consensus 779 ---~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~ 855 (949)
.+||+|||+++......... ...||+.|+|||++.+..++.++|||||||++|||++|+.||....... ...
T Consensus 153 ~~~~~kl~Dfg~a~~~~~~~~~~---~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~-~~~- 227 (326)
T 2y0a_A 153 PKPRIKIIDFGLAHKIDFGNEFK---NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE-TLA- 227 (326)
T ss_dssp SSCCEEECCCTTCEECCTTSCCC---CCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHH-HHH-
T ss_pred CCCCEEEEECCCCeECCCCCccc---cccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHH-HHH-
Confidence 89999999998875443222 3459999999999998899999999999999999999999995321110 000
Q ss_pred hccccCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 039533 856 FGRKALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVH 926 (949)
Q Consensus 856 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 926 (949)
.+....... +. ......+..+.+++.+|++.||++|||+.|+++
T Consensus 228 -----------~~~~~~~~~-~~---------------~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 271 (326)
T 2y0a_A 228 -----------NVSAVNYEF-ED---------------EYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ 271 (326)
T ss_dssp -----------HHHHTCCCC-CH---------------HHHTTSCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred -----------HHHhcCCCc-Cc---------------cccccCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 000000000 00 001133456789999999999999999999986
No 73
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00 E-value=6.7e-40 Score=361.24 Aligned_cols=249 Identities=21% Similarity=0.230 Sum_probs=202.4
Q ss_pred hcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecC---CCcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCc
Q 039533 625 TSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQ---HHGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGND 701 (949)
Q Consensus 625 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 701 (949)
.++|++.+.||+|+||.||+|++..+++.||+|+++.. .......+.+|+.++++++||||+++++++...+
T Consensus 4 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~----- 78 (337)
T 1o6l_A 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHD----- 78 (337)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSS-----
T ss_pred hHHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCC-----
Confidence 46789999999999999999999989999999999753 2334567889999999999999999999976554
Q ss_pred cceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceE
Q 039533 702 FKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTAR 781 (949)
Q Consensus 702 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~k 781 (949)
..++||||+++|+|.+++. ....+++..++.++.||+.||+|||++ +|+||||||+||+++.++.+|
T Consensus 79 ~~~lv~E~~~gg~L~~~l~----------~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vk 145 (337)
T 1o6l_A 79 RLCFVMEYANGGELFFHLS----------RERVFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIK 145 (337)
T ss_dssp EEEEEEECCTTCBHHHHHH----------HHSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEE
T ss_pred EEEEEEeCCCCCcHHHHHH----------hcCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCCHHHEEECCCCCEE
Confidence 7899999999999999986 234689999999999999999999987 999999999999999999999
Q ss_pred EeecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhccccC
Q 039533 782 VGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKAL 861 (949)
Q Consensus 782 l~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~ 861 (949)
|+|||+++......... ....||+.|+|||++.+..++.++|||||||++|||++|+.||....... ..
T Consensus 146 L~DFG~a~~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~--~~------- 214 (337)
T 1o6l_A 146 ITDFGLCKEGISDGATM--KTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHER--LF------- 214 (337)
T ss_dssp ECCCTTCBCSCCTTCCB--CCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH--HH-------
T ss_pred EeeccchhhcccCCCcc--cccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCHHH--HH-------
Confidence 99999998643332211 24569999999999999999999999999999999999999996321110 00
Q ss_pred CCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCC-----CHHHHHH
Q 039533 862 PDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRT-----NMTNVVH 926 (949)
Q Consensus 862 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----s~~ev~~ 926 (949)
..+...... .+ ...+..+.+++.+|++.||++|| +++|+++
T Consensus 215 ----~~i~~~~~~-~p-------------------~~~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~ 260 (337)
T 1o6l_A 215 ----ELILMEEIR-FP-------------------RTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVME 260 (337)
T ss_dssp ----HHHHHCCCC-CC-------------------TTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred ----HHHHcCCCC-CC-------------------CCCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHc
Confidence 000000000 00 02244678999999999999999 8998875
No 74
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00 E-value=1.6e-39 Score=353.79 Aligned_cols=274 Identities=15% Similarity=0.135 Sum_probs=215.6
Q ss_pred hcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCCcchHHHHHHHHHHHhc-CCCcceeEEeeeecccccCCccc
Q 039533 625 TSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHGASRSFIAECKALKSI-RHRNLVKVLTACLGADYRGNDFK 703 (949)
Q Consensus 625 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~ 703 (949)
.++|++.+.||+|+||.||+|++..+++.||||++.... ..+.+.+|+.+++++ +|+|++++++++.... ..
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~-----~~ 81 (298)
T 1csn_A 9 GVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS--DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGL-----HN 81 (298)
T ss_dssp TTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT--TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETT-----EE
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCC--ccHHHHHHHHHHHHHhcCCCCCeEEeecCCCc-----ee
Confidence 367999999999999999999998899999999986443 234688999999999 7999999999875444 78
Q ss_pred eeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCc----
Q 039533 704 ASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMT---- 779 (949)
Q Consensus 704 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~---- 779 (949)
++||||+ +++|.+++.. ....+++.++..++.|++.||+|||++ +|+||||||+||+++.++.
T Consensus 82 ~lv~e~~-~~~L~~~l~~---------~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~~~~~~~~~ 148 (298)
T 1csn_A 82 VLVIDLL-GPSLEDLLDL---------CGRKFSVKTVAMAAKQMLARVQSIHEK---SLVYRDIKPDNFLIGRPNSKNAN 148 (298)
T ss_dssp EEEEECC-CCBHHHHHHH---------TTTCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECCSSSTTTT
T ss_pred EEEEEec-CCCHHHHHHH---------hccCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEeccCCCCCCC
Confidence 9999999 9999999962 234589999999999999999999977 9999999999999987776
Q ss_pred -eEEeecccceecCCCCCc-----cccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccccccCchh
Q 039533 780 -ARVGDFGLARILSPDHTQ-----TSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINL 853 (949)
Q Consensus 780 -~kl~DfG~a~~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~ 853 (949)
+||+|||+++........ .......||+.|+|||++.+..++.++|||||||++|||++|+.||..........
T Consensus 149 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~ 228 (298)
T 1csn_A 149 MIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQ 228 (298)
T ss_dssp CEEECCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHH
T ss_pred eEEEEECccccccccccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHH
Confidence 999999999877554321 11234569999999999999899999999999999999999999996432111000
Q ss_pred hhhccccCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHHhHH
Q 039533 854 HNFGRKALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHELQSIKN 933 (949)
Q Consensus 854 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~~ 933 (949)
. ...+..... ..........++..+.+++.+||+.||++|||++||++.|+++.+
T Consensus 229 --~--------~~~~~~~~~---------------~~~~~~~~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~~~ 283 (298)
T 1csn_A 229 --K--------YERIGEKKQ---------------STPLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLE 283 (298)
T ss_dssp --H--------HHHHHHHHH---------------HSCHHHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHH
T ss_pred --H--------HHHHHhhcc---------------CccHHHHHhhCcHHHHHHHHHHhcCCcccCCCHHHHHHHHHHHHH
Confidence 0 000000000 000000011345678999999999999999999999999999999
Q ss_pred hhccCCCCCC
Q 039533 934 ILLGVELCPP 943 (949)
Q Consensus 934 ~~~~~~~~~~ 943 (949)
........|+
T Consensus 284 ~~~~~~~~~~ 293 (298)
T 1csn_A 284 RLNTTEDENF 293 (298)
T ss_dssp HTTCCSCSCC
T ss_pred hcCCCCCCcc
Confidence 8877665554
No 75
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=3.6e-40 Score=353.21 Aligned_cols=258 Identities=26% Similarity=0.399 Sum_probs=207.6
Q ss_pred hcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCCcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCccce
Q 039533 625 TSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFKA 704 (949)
Q Consensus 625 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 704 (949)
.++|++.+.||+|+||.||+|++. +++.||+|++..... ..+++.+|++++++++||||+++++++.... ..+
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-----~~~ 81 (269)
T 4hcu_A 9 PSELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQA-----PIC 81 (269)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEET-TTEEEEEEEECTTSB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSS-----SEE
T ss_pred hhhceeeheecCCCccEEEEEEec-CCCeEEEEEeccccc-CHHHHHHHHHHHHhCCCCCEeeEEEEEecCC-----ceE
Confidence 357888999999999999999997 578899999975433 3467999999999999999999999976544 789
Q ss_pred eEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEee
Q 039533 705 SVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVGD 784 (949)
Q Consensus 705 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~D 784 (949)
+||||+++++|.+++.. ....+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|
T Consensus 82 lv~e~~~~~~L~~~l~~---------~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~D 149 (269)
T 4hcu_A 82 LVFEFMEHGCLSDYLRT---------QRGLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSD 149 (269)
T ss_dssp EEEECCTTCBHHHHHHT---------TTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECGGGCEEECC
T ss_pred EEEEeCCCCcHHHHHHh---------cCcccCHHHHHHHHHHHHHHHHHHHhC---CeecCCcchheEEEcCCCCEEecc
Confidence 99999999999999962 234589999999999999999999987 899999999999999999999999
Q ss_pred cccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHh-CCCCCccccccCchhhhhccccCCC
Q 039533 785 FGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVI-GKKPIDIMFEGDINLHNFGRKALPD 863 (949)
Q Consensus 785 fG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~ 863 (949)
||+++....... .......+|..|+|||++.+..++.++||||+|+++|||++ |+.||....... ...
T Consensus 150 fg~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~~--~~~-------- 218 (269)
T 4hcu_A 150 FGMTRFVLDDQY-TSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE--VVE-------- 218 (269)
T ss_dssp TTGGGGBCCHHH-HSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH--HHH--------
T ss_pred cccccccccccc-ccccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHHH--HHH--------
Confidence 999987654322 11223447788999999998889999999999999999999 999996432111 000
Q ss_pred chhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHHhHHh
Q 039533 864 DVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHELQSIKNI 934 (949)
Q Consensus 864 ~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~~~ 934 (949)
.+........+ ...+..+.+++.+|++.||++|||++|+++.|+++.++
T Consensus 219 ---~~~~~~~~~~~-------------------~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~l~~~ 267 (269)
T 4hcu_A 219 ---DISTGFRLYKP-------------------RLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAES 267 (269)
T ss_dssp ---HHHTTCCCCCC-------------------TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred ---HHhcCccCCCC-------------------CcCCHHHHHHHHHHccCCcccCcCHHHHHHHHHHHHHc
Confidence 00000000000 01234578999999999999999999999999999764
No 76
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00 E-value=6.4e-40 Score=351.02 Aligned_cols=258 Identities=24% Similarity=0.392 Sum_probs=207.9
Q ss_pred hcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCCcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCccce
Q 039533 625 TSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFKA 704 (949)
Q Consensus 625 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 704 (949)
.++|++.+.||+|+||.||+|++. ++..||+|+++.... ..+++.+|++++++++||||+++++++.... ..+
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-----~~~ 79 (268)
T 3sxs_A 7 REEITLLKELGSGQFGVVKLGKWK-GQYDVAVKMIKEGSM-SEDEFFQEAQTMMKLSHPKLVKFYGVCSKEY-----PIY 79 (268)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECBTTB-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-----SEE
T ss_pred hhheeeeeeeccCCCceEEEEEec-CceeEEEEEeccCCC-cHHHHHHHHHHHHhCCCCCEeeEEEEEccCC-----ceE
Confidence 467889999999999999999887 678899999975443 3467999999999999999999999975443 789
Q ss_pred eEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEee
Q 039533 705 SVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVGD 784 (949)
Q Consensus 705 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~D 784 (949)
+||||+++++|.+++.. ....+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|
T Consensus 80 lv~e~~~~~~L~~~l~~---------~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~D 147 (268)
T 3sxs_A 80 IVTEYISNGCLLNYLRS---------HGKGLEPSQLLEMCYDVCEGMAFLESH---QFIHRDLAARNCLVDRDLCVKVSD 147 (268)
T ss_dssp EEEECCTTCBHHHHHHH---------HGGGCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCSGGGEEECTTCCEEECC
T ss_pred EEEEccCCCcHHHHHHH---------cCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCcCcceEEECCCCCEEEcc
Confidence 99999999999999962 234589999999999999999999987 999999999999999999999999
Q ss_pred cccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHh-CCCCCccccccCchhhhhccccCCC
Q 039533 785 FGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVI-GKKPIDIMFEGDINLHNFGRKALPD 863 (949)
Q Consensus 785 fG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~ 863 (949)
||.++......... .....+|+.|+|||++.+..++.++||||||+++|||++ |+.||+........
T Consensus 148 fg~~~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~----------- 215 (268)
T 3sxs_A 148 FGMTRYVLDDQYVS-SVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVV----------- 215 (268)
T ss_dssp TTCEEECCTTCEEE-CCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHHHHH-----------
T ss_pred Cccceecchhhhhc-ccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChHHHH-----------
Confidence 99998776544322 223446788999999998899999999999999999999 99999643221100
Q ss_pred chhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHHhHHh
Q 039533 864 DVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHELQSIKNI 934 (949)
Q Consensus 864 ~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~~~ 934 (949)
..+........+ ...+..+.+++.+|++.||++|||++|+++.|+++++.
T Consensus 216 --~~~~~~~~~~~~-------------------~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~ 265 (268)
T 3sxs_A 216 --LKVSQGHRLYRP-------------------HLASDTIYQIMYSCWHELPEKRPTFQQLLSSIEPLREK 265 (268)
T ss_dssp --HHHHTTCCCCCC-------------------TTSCHHHHHHHHHTTCSSGGGSCCHHHHHHHHGGGCC-
T ss_pred --HHHHcCCCCCCC-------------------CcChHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhhc
Confidence 000000000000 01234578999999999999999999999999998764
No 77
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00 E-value=4.1e-40 Score=369.10 Aligned_cols=262 Identities=24% Similarity=0.419 Sum_probs=197.2
Q ss_pred hcCCCCCCeeeeecCceEEEEEEc---CCCEEEEEEEEecCCC-cchHHHHHHHHHHHhcCCCcceeEEeeeecccccCC
Q 039533 625 TSGFSSANLVGVGSFGSVYKGIID---EGRTTIAVKVFNLQHH-GASRSFIAECKALKSIRHRNLVKVLTACLGADYRGN 700 (949)
Q Consensus 625 ~~~y~~~~~lg~G~~g~Vy~~~~~---~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 700 (949)
.++|++.+.||+|+||.||+|++. .++..||||+++.... ...+.+.+|+.++++++||||+++++++....
T Consensus 44 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~---- 119 (373)
T 2qol_A 44 ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSK---- 119 (373)
T ss_dssp GGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSS----
T ss_pred HhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCC----
Confidence 357999999999999999999886 4567899999875432 33467999999999999999999999976544
Q ss_pred ccceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCce
Q 039533 701 DFKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTA 780 (949)
Q Consensus 701 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~ 780 (949)
..++||||+++|+|.+++.. ....+++.++..++.|++.||+|||++ +|+||||||+||+++.++.+
T Consensus 120 -~~~lv~e~~~~~sL~~~l~~---------~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~ 186 (373)
T 2qol_A 120 -PVMIVTEYMENGSLDSFLRK---------HDAQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILINSNLVC 186 (373)
T ss_dssp -SCEEEEECCTTCBHHHHHHT---------TTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCE
T ss_pred -ceEEEEeCCCCCcHHHHHHh---------CCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEEcCCCCE
Confidence 78999999999999999962 234689999999999999999999987 89999999999999999999
Q ss_pred EEeecccceecCCCCCcc-ccccccCccCccCccccCCCccCCccchHHHHHHHHHHHh-CCCCCccccccCchhhhhcc
Q 039533 781 RVGDFGLARILSPDHTQT-SSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVI-GKKPIDIMFEGDINLHNFGR 858 (949)
Q Consensus 781 kl~DfG~a~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~ellt-g~~Pf~~~~~~~~~~~~~~~ 858 (949)
||+|||+++......... ......++..|+|||++.+..++.++|||||||++|||++ |+.||......+
T Consensus 187 kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~~-------- 258 (373)
T 2qol_A 187 KVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQD-------- 258 (373)
T ss_dssp EECCC----------------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHHH--------
T ss_pred EECcCccccccccCCccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHHH--------
Confidence 999999998765443211 1112235778999999998899999999999999999998 999996432111
Q ss_pred ccCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHHhHHhh
Q 039533 859 KALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHELQSIKNIL 935 (949)
Q Consensus 859 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~~~~ 935 (949)
..+.+...... +....++..+.+++.+||+.||++||++.||++.|+++....
T Consensus 259 ------~~~~i~~~~~~------------------~~~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~~~~~ 311 (373)
T 2qol_A 259 ------VIKAVDEGYRL------------------PPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNP 311 (373)
T ss_dssp ------HHHHHHTTEEC------------------CCCTTCBHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCG
T ss_pred ------HHHHHHcCCCC------------------CCCccccHHHHHHHHHHhCcChhhCcCHHHHHHHHHHHHhCc
Confidence 01111100000 000133556889999999999999999999999999987653
No 78
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00 E-value=1.6e-39 Score=359.20 Aligned_cols=266 Identities=18% Similarity=0.208 Sum_probs=210.2
Q ss_pred hcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCCcchHHHHHHHHHHHhc-CCCcceeEEeeeecccccCCccc
Q 039533 625 TSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHGASRSFIAECKALKSI-RHRNLVKVLTACLGADYRGNDFK 703 (949)
Q Consensus 625 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~ 703 (949)
.++|++.+.||+|+||.||+|++..+++.||||++..... .+.+.+|+++++++ +||||+++++++...+ ..
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~-----~~ 80 (330)
T 2izr_A 8 GPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSR--APQLHLEYRFYKQLGSGDGIPQVYYFGPCGK-----YN 80 (330)
T ss_dssp TTTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCS--SCCHHHHHHHHHHHCSCTTSCCEEEEEEETT-----EE
T ss_pred cCCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccc--hHHHHHHHHHHHHhhCCCCCCEEEEEEecCC-----cc
Confidence 3679999999999999999999988999999999875432 34688999999999 9999999999976544 78
Q ss_pred eeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCc----
Q 039533 704 ASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMT---- 779 (949)
Q Consensus 704 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~---- 779 (949)
++||||+ +++|.+++.. ....+++.+++.++.|++.||+|||++ +|+||||||+||+++.++.
T Consensus 81 ~lv~e~~-~~~L~~~~~~---------~~~~~~~~~~~~i~~qi~~~l~~LH~~---~iiHrDlkp~Nill~~~~~~~~~ 147 (330)
T 2izr_A 81 AMVLELL-GPSLEDLFDL---------CDRTFSLKTVLMIAIQLISRMEYVHSK---NLIYRDVKPENFLIGRPGNKTQQ 147 (330)
T ss_dssp EEEEECC-CCBHHHHHHH---------TTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTCTT
T ss_pred EEEEEeC-CCCHHHHHHH---------cCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeeeccCCCCCCc
Confidence 9999999 9999999962 135689999999999999999999988 9999999999999998887
Q ss_pred -eEEeecccceecCCCCCcc-----ccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccccccCchh
Q 039533 780 -ARVGDFGLARILSPDHTQT-----SSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINL 853 (949)
Q Consensus 780 -~kl~DfG~a~~~~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~ 853 (949)
+||+|||+++......... ......||+.|+|||++.+..++.++|||||||++|||++|+.||........
T Consensus 148 ~~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~-- 225 (330)
T 2izr_A 148 VIHIIDFALAKEYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTL-- 225 (330)
T ss_dssp SEEECCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSH--
T ss_pred eEEEEEcccceeeecCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccccH--
Confidence 9999999999765443211 11245699999999999999999999999999999999999999964321110
Q ss_pred hhhccccCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhh-HHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHHhH
Q 039533 854 HNFGRKALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINS-IIECLISMVRIGVACSMELPQDRTNMTNVVHELQSIK 932 (949)
Q Consensus 854 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~ 932 (949)
.... ..+.+. ......+. ....+ .+.+++..|++.||++||++++|.+.|+++.
T Consensus 226 ~~~~--------~~i~~~----------------~~~~~~~~~~~~~p-~~~~li~~~l~~~p~~RP~~~~l~~~l~~~~ 280 (330)
T 2izr_A 226 KERY--------QKIGDT----------------KRATPIEVLCENFP-EMATYLRYVRRLDFFEKPDYDYLRKLFTDLF 280 (330)
T ss_dssp HHHH--------HHHHHH----------------HHHSCHHHHTTTCH-HHHHHHHHHHHCCTTCCCCHHHHHHHHHHHH
T ss_pred HHHH--------HHHHhh----------------hccCCHHHHhccCh-HHHHHHHHHHhCCCCCCCCHHHHHHHHHHHH
Confidence 0000 000000 00000000 01123 7899999999999999999999999999998
Q ss_pred Hhhcc
Q 039533 933 NILLG 937 (949)
Q Consensus 933 ~~~~~ 937 (949)
+....
T Consensus 281 ~~~~~ 285 (330)
T 2izr_A 281 DRKGY 285 (330)
T ss_dssp HHTTC
T ss_pred HHcCC
Confidence 77543
No 79
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00 E-value=9.4e-40 Score=359.66 Aligned_cols=248 Identities=24% Similarity=0.315 Sum_probs=200.6
Q ss_pred hcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCC---CcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCc
Q 039533 625 TSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQH---HGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGND 701 (949)
Q Consensus 625 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 701 (949)
.++|.+.+.||+|+||.||+|++..+++.||||++.... ......+.+|+.++++++||||+++++++...+
T Consensus 8 i~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~----- 82 (336)
T 3h4j_B 8 IGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPT----- 82 (336)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSS-----
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCC-----
Confidence 468999999999999999999998899999999997432 223467899999999999999999999976544
Q ss_pred cceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceE
Q 039533 702 FKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTAR 781 (949)
Q Consensus 702 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~k 781 (949)
..++||||+ +|+|.+++. ....+++.++..++.|++.||+|||+. +|+||||||+||++++++.+|
T Consensus 83 ~~~lv~E~~-~g~l~~~l~----------~~~~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~k 148 (336)
T 3h4j_B 83 DIVMVIEYA-GGELFDYIV----------EKKRMTEDEGRRFFQQIICAIEYCHRH---KIVHRDLKPENLLLDDNLNVK 148 (336)
T ss_dssp EEEEEECCC-CEEHHHHHH----------HHCSCCHHHHHHHHHHHHHHHHHHHHH---TCCCCCCSTTTEEECTTCCEE
T ss_pred EEEEEEECC-CCcHHHHHH----------HcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCchhhEEEcCCCCEE
Confidence 789999999 689999886 235689999999999999999999988 899999999999999999999
Q ss_pred EeecccceecCCCCCccccccccCccCccCccccCCCcc-CCccchHHHHHHHHHHHhCCCCCccccccCchhhhhcccc
Q 039533 782 VGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEV-STNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKA 860 (949)
Q Consensus 782 l~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~ 860 (949)
|+|||++.......... ...||+.|+|||++.+..+ +.++|||||||++|||++|+.||+...... ..
T Consensus 149 l~DFG~s~~~~~~~~~~---~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~-----~~--- 217 (336)
T 3h4j_B 149 IADFGLSNIMTDGNFLK---TSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPN-----LF--- 217 (336)
T ss_dssp ECCSSCTBTTTTSBTTC---CCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTT-----CB---
T ss_pred EEEeccceeccCCcccc---cccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHH-----HH---
Confidence 99999998765443222 3459999999999998876 689999999999999999999996432111 00
Q ss_pred CCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHH
Q 039533 861 LPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHE 927 (949)
Q Consensus 861 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 927 (949)
..+.......+ ...+..+.+++.+|++.||++|||++|+++.
T Consensus 218 ------~~i~~~~~~~p-------------------~~~s~~~~~li~~~L~~dP~~Rpt~~eil~h 259 (336)
T 3h4j_B 218 ------KKVNSCVYVMP-------------------DFLSPGAQSLIRRMIVADPMQRITIQEIRRD 259 (336)
T ss_dssp ------CCCCSSCCCCC-------------------TTSCHHHHHHHHTTSCSSGGGSCCHHHHTTC
T ss_pred ------HHHHcCCCCCc-------------------ccCCHHHHHHHHHHcCCChhHCcCHHHHHhC
Confidence 00000000000 0123457889999999999999999999763
No 80
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=100.00 E-value=2.3e-39 Score=372.17 Aligned_cols=358 Identities=20% Similarity=0.220 Sum_probs=201.5
Q ss_pred cCCCCCCCCCceeeccCceeccccCCcccCcccCcEEeeccccccCcCCCCCCCCccceeecCCCccccccccccccCCC
Q 039533 82 SHFIGNLSFLKQLYLQVNSFTHEIPSEIGGLRRLKVLALNNNSICGEIPTNISRCSTLIPIHPQNNQLVGKILSRFSSLS 161 (949)
Q Consensus 82 ~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~L~ 161 (949)
+..++++++|++|+|++|.+++ +| .|+.+++|++|+|++|++++ +| ++++++|++|++++|++++.. |+.++
T Consensus 35 ~~~~~~l~~L~~L~Ls~n~l~~-~~-~l~~l~~L~~L~Ls~n~l~~-~~--~~~l~~L~~L~Ls~N~l~~~~---~~~l~ 106 (457)
T 3bz5_A 35 TISEEQLATLTSLDCHNSSITD-MT-GIEKLTGLTKLICTSNNITT-LD--LSQNTNLTYLACDSNKLTNLD---VTPLT 106 (457)
T ss_dssp EEEHHHHTTCCEEECCSSCCCC-CT-TGGGCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSCCSCCC---CTTCT
T ss_pred ccChhHcCCCCEEEccCCCccc-Ch-hhcccCCCCEEEccCCcCCe-Ec--cccCCCCCEEECcCCCCceee---cCCCC
Confidence 3345556666666666666664 34 46666666666666666664 33 666666666666666666541 56666
Q ss_pred CCcEEECCCCCCCCCCCCCcCCCCCccEEeccccccCCCCCCcccCCCccccccccCcccccccccccCCCCChhhhccc
Q 039533 162 KTEILNLGSNHLTGSIPSSLGNLSSIHTISLAYNNLDGTIPNSFGWFENLVFLSLAANNLSVVENKLTGEVPSLEKLQRL 241 (949)
Q Consensus 162 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~l~~~~~~l~~l~~L 241 (949)
+|++|+|++|++++ +| ++++++|++|++++|++++. + ++.+++|++|++++|... +.+ .+..+++|
T Consensus 107 ~L~~L~L~~N~l~~-l~--~~~l~~L~~L~l~~N~l~~l-~--l~~l~~L~~L~l~~n~~~-------~~~-~~~~l~~L 172 (457)
T 3bz5_A 107 KLTYLNCDTNKLTK-LD--VSQNPLLTYLNCARNTLTEI-D--VSHNTQLTELDCHLNKKI-------TKL-DVTPQTQL 172 (457)
T ss_dssp TCCEEECCSSCCSC-CC--CTTCTTCCEEECTTSCCSCC-C--CTTCTTCCEEECTTCSCC-------CCC-CCTTCTTC
T ss_pred cCCEEECCCCcCCe-ec--CCCCCcCCEEECCCCcccee-c--cccCCcCCEEECCCCCcc-------ccc-ccccCCcC
Confidence 66666666666664 33 56666666666666666643 2 556666666666665311 111 23445555
Q ss_pred cccccccCCCCCCCCCCcchhccccccCcccEEEccCCCCCccCCchhhcccccccEEEccCccccCCCCCCCCCCCccc
Q 039533 242 QHFTITSNSLGSGGNDDLSFLCSLTNATRLTWMHINSNNFGGLLPGCISNLSKTIKTLFLNNNKIYGSIPAGIGNFVNLQ 321 (949)
Q Consensus 242 ~~L~l~~N~l~~~~~~~~~~~~~l~~~~~L~~L~L~~N~l~~~~p~~~~~l~~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 321 (949)
++|++++|+++..+ +..+++|+.|++++|++++. .+..+ ++|++|++++|++++ +| ++.+++|+
T Consensus 173 ~~L~ls~n~l~~l~---------l~~l~~L~~L~l~~N~l~~~---~l~~l-~~L~~L~Ls~N~l~~-ip--~~~l~~L~ 236 (457)
T 3bz5_A 173 TTLDCSFNKITELD---------VSQNKLLNRLNCDTNNITKL---DLNQN-IQLTFLDCSSNKLTE-ID--VTPLTQLT 236 (457)
T ss_dssp CEEECCSSCCCCCC---------CTTCTTCCEEECCSSCCSCC---CCTTC-TTCSEEECCSSCCSC-CC--CTTCTTCS
T ss_pred CEEECCCCccceec---------cccCCCCCEEECcCCcCCee---ccccC-CCCCEEECcCCcccc-cC--ccccCCCC
Confidence 55555555554421 34455566666666666654 13444 346666666666665 34 56666666
Q ss_pred EEEeecceecccCCCcccccCCCCEEecCCcccccccCcccccccccceeecccccccccCCCCCCCCCCCcEEEeeCcc
Q 039533 322 RLDMWNNQLSGTIPPAIGELQNLKILGLNRNKLSGNIPPSIGNLKMLLNLFLNDNFLEVSIPSSLGQCESLIEINLSNNN 401 (949)
Q Consensus 322 ~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~ 401 (949)
+|++++|++++.. ++.+++|+.|++++| +|+.|++++|.+.+.+| ++.+++|+.|++++|.
T Consensus 237 ~L~l~~N~l~~~~---~~~l~~L~~L~l~~n--------------~L~~L~l~~n~~~~~~~--~~~l~~L~~L~Ls~n~ 297 (457)
T 3bz5_A 237 YFDCSVNPLTELD---VSTLSKLTTLHCIQT--------------DLLEIDLTHNTQLIYFQ--AEGCRKIKELDVTHNT 297 (457)
T ss_dssp EEECCSSCCSCCC---CTTCTTCCEEECTTC--------------CCSCCCCTTCTTCCEEE--CTTCTTCCCCCCTTCT
T ss_pred EEEeeCCcCCCcC---HHHCCCCCEEeccCC--------------CCCEEECCCCccCCccc--ccccccCCEEECCCCc
Confidence 6666666666543 234445555555544 23455666666655555 3556666667777666
Q ss_pred ccCCCCCcccCCcccceeeccCCCccCCCCccccccccccceeeeccccccccCCcccccccchhhcccCccccccccCC
Q 039533 402 LSGTIPPQFFSLSSLSISLDWSRNKLTGSLPIEVGKLKILEFLYVYENRLEGEIPSTFGNCIRLEQLGMGGNLFQGPISS 481 (949)
Q Consensus 402 l~~~~p~~~~~l~~l~~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~ 481 (949)
+.+.+|... ..+ +.|++++| ++|++|++++|+|++. + ++++++|+.|++++|+|++
T Consensus 298 ~l~~l~~~~---~~L-~~L~l~~~-------------~~L~~L~L~~N~l~~l-~--l~~l~~L~~L~l~~N~l~~---- 353 (457)
T 3bz5_A 298 QLYLLDCQA---AGI-TELDLSQN-------------PKLVYLYLNNTELTEL-D--VSHNTKLKSLSCVNAHIQD---- 353 (457)
T ss_dssp TCCEEECTT---CCC-SCCCCTTC-------------TTCCEEECTTCCCSCC-C--CTTCTTCSEEECCSSCCCB----
T ss_pred ccceeccCC---Ccc-eEechhhc-------------ccCCEEECCCCccccc-c--cccCCcCcEEECCCCCCCC----
Confidence 665555422 222 23333332 4566666666666652 2 5666666666666666654
Q ss_pred CcCCCCCCCEEECCCCcCCCcCcccccCCccceEeCCCCcCcCcccc
Q 039533 482 SLGSLRGLRVLDLSQNNLSGEIPKFLAGLSLNNLNLSYNDLEGMVTT 528 (949)
Q Consensus 482 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~l~ls~N~l~~~~~~ 528 (949)
++.|..|++++|+++|. + ....+..+++++|+|+|.+|.
T Consensus 354 ----l~~L~~L~l~~n~l~g~-~---~~~~l~~l~l~~N~l~g~ip~ 392 (457)
T 3bz5_A 354 ----FSSVGKIPALNNNFEAE-G---QTITMPKETLTNNSLTIAVSP 392 (457)
T ss_dssp ----CTTGGGSSGGGTSEEEE-E---EEEECCCBCCBTTBEEEECCT
T ss_pred ----ccccccccccCCcEEec-c---eeeecCccccccCcEEEEcCh
Confidence 13444555666666654 1 111255666666666666654
No 81
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00 E-value=2.9e-40 Score=364.68 Aligned_cols=283 Identities=22% Similarity=0.291 Sum_probs=212.0
Q ss_pred cCCCCCCeeeeecCceEEEEEE----cCCCEEEEEEEEecCCCcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCc
Q 039533 626 SGFSSANLVGVGSFGSVYKGII----DEGRTTIAVKVFNLQHHGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGND 701 (949)
Q Consensus 626 ~~y~~~~~lg~G~~g~Vy~~~~----~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 701 (949)
++|++.+.||+|+||.||+|++ ..+++.||||++........+.+.+|++++++++||||+++++++... +..
T Consensus 23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~---~~~ 99 (327)
T 3lxl_A 23 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGP---GRQ 99 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECS---SSC
T ss_pred hhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecC---CCc
Confidence 5788899999999999999994 567899999999866555567799999999999999999999987632 234
Q ss_pred cceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceE
Q 039533 702 FKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTAR 781 (949)
Q Consensus 702 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~k 781 (949)
..++||||+++++|.+++.. ....+++.+++.++.|++.||+|||+. +|+||||||+||+++.++.+|
T Consensus 100 ~~~lv~e~~~~~~L~~~l~~---------~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~k 167 (327)
T 3lxl_A 100 SLRLVMEYLPSGCLRDFLQR---------HRARLDASRLLLYSSQICKGMEYLGSR---RCVHRDLAARNILVESEAHVK 167 (327)
T ss_dssp EEEEEEECCTTCBHHHHHHH---------HGGGCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEE
T ss_pred eEEEEEeecCCCCHHHHHHh---------cccCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChhhEEECCCCCEE
Confidence 68899999999999999962 234589999999999999999999987 999999999999999999999
Q ss_pred EeecccceecCCCCCc-cccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhcccc
Q 039533 782 VGDFGLARILSPDHTQ-TSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKA 860 (949)
Q Consensus 782 l~DfG~a~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~ 860 (949)
|+|||.++........ .......||..|+|||++.+..++.++|||||||++|||++|+.||.......... .....
T Consensus 168 l~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~--~~~~~ 245 (327)
T 3lxl_A 168 IADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRM--MGCER 245 (327)
T ss_dssp ECCGGGCEECCTTCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHH--CC---
T ss_pred EcccccceecccCCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhh--ccccc
Confidence 9999999987654432 12223458888999999998889999999999999999999999986432211000 00000
Q ss_pred CCCc---hhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHHhHHhhcc
Q 039533 861 LPDD---VMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHELQSIKNILLG 937 (949)
Q Consensus 861 ~~~~---~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~~~~~~ 937 (949)
.... ..+.+..... .+....++..+.+++.+|++.||++|||++|+++.|+++......
T Consensus 246 ~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~~~ 307 (327)
T 3lxl_A 246 DVPALSRLLELLEEGQR------------------LPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSGSRG 307 (327)
T ss_dssp -CCHHHHHHHHHHTTCC------------------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC------
T ss_pred ccccHHHHHHHhhcccC------------------CCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhhhcC
Confidence 0000 1111111110 011123456789999999999999999999999999999887776
Q ss_pred CCCCCC
Q 039533 938 VELCPP 943 (949)
Q Consensus 938 ~~~~~~ 943 (949)
+...++
T Consensus 308 ~~~~~~ 313 (327)
T 3lxl_A 308 CETHAF 313 (327)
T ss_dssp ------
T ss_pred cccccc
Confidence 655443
No 82
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00 E-value=4.2e-40 Score=363.08 Aligned_cols=259 Identities=24% Similarity=0.407 Sum_probs=200.8
Q ss_pred cCCCCCCeeeeecCceEEEEEEcCCCEE----EEEEEEecCC-CcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCC
Q 039533 626 SGFSSANLVGVGSFGSVYKGIIDEGRTT----IAVKVFNLQH-HGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGN 700 (949)
Q Consensus 626 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~----vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 700 (949)
++|++.+.||+|+||+||+|++..+++. ||+|+++... ....+++.+|+.++++++||||++++++|...
T Consensus 15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~----- 89 (327)
T 3poz_A 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS----- 89 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESS-----
T ss_pred HHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecC-----
Confidence 5688899999999999999998766654 5777775332 23457899999999999999999999998643
Q ss_pred ccceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCce
Q 039533 701 DFKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTA 780 (949)
Q Consensus 701 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~ 780 (949)
..++|+||+++|+|.+++.. ....+++..++.|+.|++.||+|||++ +|+||||||+||+++.++.+
T Consensus 90 -~~~~v~e~~~~g~L~~~l~~---------~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIll~~~~~~ 156 (327)
T 3poz_A 90 -TVQLITQLMPFGCLLDYVRE---------HKDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHV 156 (327)
T ss_dssp -SEEEEEECCTTCBHHHHHHH---------STTSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEE
T ss_pred -CeEEEEEecCCCcHHHHHHh---------cCCCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCChheEEECCCCCE
Confidence 36899999999999999962 235689999999999999999999988 99999999999999999999
Q ss_pred EEeecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHh-CCCCCccccccCchhhhhccc
Q 039533 781 RVGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVI-GKKPIDIMFEGDINLHNFGRK 859 (949)
Q Consensus 781 kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~ellt-g~~Pf~~~~~~~~~~~~~~~~ 859 (949)
||+|||+|+...............+|..|+|||++.+..++.++|||||||++|||+| |+.||+......
T Consensus 157 kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~--------- 227 (327)
T 3poz_A 157 KITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE--------- 227 (327)
T ss_dssp EECCTTHHHHHTTTCC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG---------
T ss_pred EEccCcceeEccCCcccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHHH---------
Confidence 9999999998765544333334457889999999999999999999999999999999 999996432211
Q ss_pred cCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHHhHHh
Q 039533 860 ALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHELQSIKNI 934 (949)
Q Consensus 860 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~~~ 934 (949)
....+........ ...++..+.+++.+||+.||++|||+.|+++.|+++...
T Consensus 228 -----~~~~~~~~~~~~~------------------~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~~~~ 279 (327)
T 3poz_A 228 -----ISSILEKGERLPQ------------------PPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARD 279 (327)
T ss_dssp -----HHHHHHTTCCCCC------------------CTTBCHHHHHHHHHHTCSCGGGSCCHHHHHHHHHHHHTS
T ss_pred -----HHHHHHcCCCCCC------------------CccCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhh
Confidence 1111111110000 012345678999999999999999999999999998654
No 83
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00 E-value=1.7e-39 Score=353.54 Aligned_cols=252 Identities=22% Similarity=0.276 Sum_probs=196.6
Q ss_pred hcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCC--------------------------cchHHHHHHHHHHH
Q 039533 625 TSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHH--------------------------GASRSFIAECKALK 678 (949)
Q Consensus 625 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--------------------------~~~~~~~~E~~~l~ 678 (949)
.++|++.+.||+|+||.||+|++..+++.||||++..... ...+.+.+|+++++
T Consensus 12 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~ 91 (298)
T 2zv2_A 12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILK 91 (298)
T ss_dssp ETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHH
T ss_pred ecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHH
Confidence 4689999999999999999999998999999999974421 11356889999999
Q ss_pred hcCCCcceeEEeeeecccccCCccceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCC
Q 039533 679 SIRHRNLVKVLTACLGADYRGNDFKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDC 758 (949)
Q Consensus 679 ~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~ 758 (949)
+++||||+++++++... .....++||||+++++|.+++. ...+++.++..++.|++.||+|||++
T Consensus 92 ~l~h~~iv~~~~~~~~~---~~~~~~lv~e~~~~~~l~~~~~-----------~~~~~~~~~~~~~~qi~~~l~~lH~~- 156 (298)
T 2zv2_A 92 KLDHPNVVKLVEVLDDP---NEDHLYMVFELVNQGPVMEVPT-----------LKPLSEDQARFYFQDLIKGIEYLHYQ- 156 (298)
T ss_dssp TCCCTTBCCEEEEEECS---SSSEEEEEEECCTTCBSCCSSC-----------SSCCCHHHHHHHHHHHHHHHHHHHHT-
T ss_pred hCCCCCCCeEEEEEEcC---CCCEEEEEEecCCCCcHHHHhh-----------cCCCCHHHHHHHHHHHHHHHHHHHHC-
Confidence 99999999999998642 2347899999999999988754 24589999999999999999999988
Q ss_pred CCCeEecCCCCCCeeecCCCceEEeecccceecCCCCCccccccccCccCccCccccCCCc---cCCccchHHHHHHHHH
Q 039533 759 QPVTAHCDLKPSNVLLDDYMTARVGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCE---VSTNGDVYSYGILLLE 835 (949)
Q Consensus 759 ~~~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---~~~~sDiwSlGvvl~e 835 (949)
+|+||||||+||+++.++.+||+|||+++......... ....||+.|+|||++.+.. ++.++|||||||++||
T Consensus 157 --~ivH~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~ 232 (298)
T 2zv2_A 157 --KIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDALL--SNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYC 232 (298)
T ss_dssp --TEECCCCCGGGEEECTTSCEEECCCTTCEECSSSSCEE--CCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHH
T ss_pred --CeeccCCCHHHEEECCCCCEEEecCCCccccccccccc--cCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHH
Confidence 99999999999999999999999999998765543322 2356999999999988765 4788999999999999
Q ss_pred HHhCCCCCccccccCchhhhhccccCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCC
Q 039533 836 LVIGKKPIDIMFEGDINLHNFGRKALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELP 915 (949)
Q Consensus 836 lltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP 915 (949)
|++|+.||...... .... .+....... +. ....+..+.+++.+|++.||
T Consensus 233 l~~g~~pf~~~~~~--~~~~-----------~~~~~~~~~-~~-----------------~~~~~~~l~~li~~~l~~dp 281 (298)
T 2zv2_A 233 FVFGQCPFMDERIM--CLHS-----------KIKSQALEF-PD-----------------QPDIAEDLKDLITRMLDKNP 281 (298)
T ss_dssp HHHSSCSSCCSSHH--HHHH-----------HHHHCCCCC-CS-----------------SSCCCHHHHHHHHHHTCSCT
T ss_pred HHHCCCCCCCccHH--HHHH-----------HHhcccCCC-CC-----------------ccccCHHHHHHHHHHhhcCh
Confidence 99999999632111 0000 000000000 00 00224567899999999999
Q ss_pred CCCCCHHHHHH
Q 039533 916 QDRTNMTNVVH 926 (949)
Q Consensus 916 ~~RPs~~ev~~ 926 (949)
++|||+.|+++
T Consensus 282 ~~R~s~~e~l~ 292 (298)
T 2zv2_A 282 ESRIVVPEIKL 292 (298)
T ss_dssp TTSCCHHHHTT
T ss_pred hhCCCHHHHhc
Confidence 99999999864
No 84
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00 E-value=1.9e-39 Score=351.20 Aligned_cols=254 Identities=24% Similarity=0.411 Sum_probs=201.8
Q ss_pred hcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCCcc-------hHHHHHHHHHHHhcCCCcceeEEeeeecccc
Q 039533 625 TSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHGA-------SRSFIAECKALKSIRHRNLVKVLTACLGADY 697 (949)
Q Consensus 625 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~-------~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 697 (949)
.++|++.+.||+|+||.||+|++..+++.||+|++....... .+.+.+|++++++++||||+++++++...
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~-- 95 (287)
T 4f0f_A 18 DNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNP-- 95 (287)
T ss_dssp STTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTT--
T ss_pred hccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCC--
Confidence 367899999999999999999999899999999986543321 16789999999999999999999997432
Q ss_pred cCCccceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCC--eEecCCCCCCeeec
Q 039533 698 RGNDFKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPV--TAHCDLKPSNVLLD 775 (949)
Q Consensus 698 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~--ivHrDlkp~NIll~ 775 (949)
.++||||+++|+|.+++.. ....+++..+..++.|++.||+|||++ + |+||||||+||+++
T Consensus 96 -----~~lv~e~~~~~~L~~~l~~---------~~~~~~~~~~~~~~~~l~~~l~~lH~~---~~~ivH~dikp~Nil~~ 158 (287)
T 4f0f_A 96 -----PRMVMEFVPCGDLYHRLLD---------KAHPIKWSVKLRLMLDIALGIEYMQNQ---NPPIVHRDLRSPNIFLQ 158 (287)
T ss_dssp -----TEEEEECCTTCBHHHHHHC---------TTSCCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCSCCSGGGEEES
T ss_pred -----CeEEEEecCCCCHHHHHhc---------ccCCccHHHHHHHHHHHHHHHHHHHhC---CCCeecCCCCcceEEEe
Confidence 3799999999999998862 234689999999999999999999977 7 99999999999998
Q ss_pred CCCc-----eEEeecccceecCCCCCccccccccCccCccCccccC--CCccCCccchHHHHHHHHHHHhCCCCCccccc
Q 039533 776 DYMT-----ARVGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGV--GCEVSTNGDVYSYGILLLELVIGKKPIDIMFE 848 (949)
Q Consensus 776 ~~~~-----~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~--~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~ 848 (949)
.++. +||+|||+++..... .....||+.|+|||++. ...++.++|||||||++|||++|+.||.....
T Consensus 159 ~~~~~~~~~~kl~Dfg~~~~~~~~-----~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~ 233 (287)
T 4f0f_A 159 SLDENAPVCAKVADFGLSQQSVHS-----VSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSY 233 (287)
T ss_dssp CCCTTCSCCEEECCCTTCBCCSSC-----EECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCC
T ss_pred ccCCCCceeEEeCCCCcccccccc-----ccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccc
Confidence 7776 999999999854332 12356999999999984 45678999999999999999999999964432
Q ss_pred cCchhhhhccccCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHH
Q 039533 849 GDINLHNFGRKALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHEL 928 (949)
Q Consensus 849 ~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L 928 (949)
.......... ........ ...++..+.+++.+||+.||++|||++|+++.|
T Consensus 234 ~~~~~~~~~~-----------~~~~~~~~------------------~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L 284 (287)
T 4f0f_A 234 GKIKFINMIR-----------EEGLRPTI------------------PEDCPPRLRNVIELCWSGDPKKRPHFSYIVKEL 284 (287)
T ss_dssp CHHHHHHHHH-----------HSCCCCCC------------------CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred cHHHHHHHHh-----------ccCCCCCC------------------CcccCHHHHHHHHHHhcCChhhCcCHHHHHHHH
Confidence 2211111110 00000000 012345688999999999999999999999999
Q ss_pred HHh
Q 039533 929 QSI 931 (949)
Q Consensus 929 ~~i 931 (949)
+++
T Consensus 285 ~~l 287 (287)
T 4f0f_A 285 SEL 287 (287)
T ss_dssp HTC
T ss_pred HhC
Confidence 864
No 85
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00 E-value=4.2e-40 Score=366.13 Aligned_cols=275 Identities=24% Similarity=0.384 Sum_probs=210.5
Q ss_pred HHhcCCCCCCeeeeecCceEEEEEEcC-----CCEEEEEEEEecCCC-cchHHHHHHHHHHHhcCCCcceeEEeeeeccc
Q 039533 623 NATSGFSSANLVGVGSFGSVYKGIIDE-----GRTTIAVKVFNLQHH-GASRSFIAECKALKSIRHRNLVKVLTACLGAD 696 (949)
Q Consensus 623 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~-----~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 696 (949)
...++|++.+.||+|+||.||+|++.. +++.||||+++.... ...+.+.+|+.++++++||||+++++++...+
T Consensus 44 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~ 123 (343)
T 1luf_A 44 YPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGK 123 (343)
T ss_dssp CCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSS
T ss_pred ecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccCC
Confidence 345789999999999999999999973 458999999975433 23467899999999999999999999976543
Q ss_pred ccCCccceeEeeeccCCChhhhcCCCCCCC--------------ccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCe
Q 039533 697 YRGNDFKASVYEFMHYGSLEEWLHPFTGED--------------EIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVT 762 (949)
Q Consensus 697 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~--------------~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~i 762 (949)
..++||||+++|+|.+++....... ........+++.+++.++.|++.||+|||++ +|
T Consensus 124 -----~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~---~i 195 (343)
T 1luf_A 124 -----PMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSER---KF 195 (343)
T ss_dssp -----SCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHT---TC
T ss_pred -----ceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhC---Ce
Confidence 7899999999999999997432110 0001125689999999999999999999988 99
Q ss_pred EecCCCCCCeeecCCCceEEeecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHh-CCC
Q 039533 763 AHCDLKPSNVLLDDYMTARVGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVI-GKK 841 (949)
Q Consensus 763 vHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~ellt-g~~ 841 (949)
+||||||+||+++.++.+||+|||+++...............+|+.|+|||++.+..++.++|||||||++|||++ |+.
T Consensus 196 vH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~ 275 (343)
T 1luf_A 196 VHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQ 275 (343)
T ss_dssp CCSCCSGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCC
T ss_pred ecCCCCcceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCC
Confidence 9999999999999999999999999987654332222234458899999999988889999999999999999999 999
Q ss_pred CCccccccCchhhhhccccCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCH
Q 039533 842 PIDIMFEGDINLHNFGRKALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNM 921 (949)
Q Consensus 842 Pf~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~ 921 (949)
||....... ... .+.+......+ ..++..+.+++.+||+.||++|||+
T Consensus 276 p~~~~~~~~--~~~-----------~~~~~~~~~~~-------------------~~~~~~l~~li~~~l~~~p~~Rps~ 323 (343)
T 1luf_A 276 PYYGMAHEE--VIY-----------YVRDGNILACP-------------------ENCPLELYNLMRLCWSKLPADRPSF 323 (343)
T ss_dssp TTTTSCHHH--HHH-----------HHHTTCCCCCC-------------------TTCCHHHHHHHHHHTCSSGGGSCCH
T ss_pred cCCCCChHH--HHH-----------HHhCCCcCCCC-------------------CCCCHHHHHHHHHHcccCcccCCCH
Confidence 996432111 000 00111100000 1234568899999999999999999
Q ss_pred HHHHHHHHHhHHhhcc
Q 039533 922 TNVVHELQSIKNILLG 937 (949)
Q Consensus 922 ~ev~~~L~~i~~~~~~ 937 (949)
.||++.|+++.+.+.+
T Consensus 324 ~~~~~~L~~~~~~~~~ 339 (343)
T 1luf_A 324 CSIHRILQRMCERAEG 339 (343)
T ss_dssp HHHHHHHHHTTC----
T ss_pred HHHHHHHHHHHhhhhh
Confidence 9999999999877654
No 86
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00 E-value=1.2e-39 Score=357.69 Aligned_cols=270 Identities=23% Similarity=0.363 Sum_probs=211.3
Q ss_pred hcCCCCCCeeeeecCceEEEEEEc-----CCCEEEEEEEEecCCC-cchHHHHHHHHHHHhcCCCcceeEEeeeeccccc
Q 039533 625 TSGFSSANLVGVGSFGSVYKGIID-----EGRTTIAVKVFNLQHH-GASRSFIAECKALKSIRHRNLVKVLTACLGADYR 698 (949)
Q Consensus 625 ~~~y~~~~~lg~G~~g~Vy~~~~~-----~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 698 (949)
.++|.+.+.||+|+||.||+|++. .+++.||||+++.... ...+.+.+|++++++++||||+++++++...+
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-- 99 (314)
T 2ivs_A 22 RKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDG-- 99 (314)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSS--
T ss_pred hhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCC--
Confidence 467889999999999999999983 3558999999875432 33467899999999999999999999976544
Q ss_pred CCccceeEeeeccCCChhhhcCCCCCCCc--------------cccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEe
Q 039533 699 GNDFKASVYEFMHYGSLEEWLHPFTGEDE--------------IDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAH 764 (949)
Q Consensus 699 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~--------------~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH 764 (949)
..++||||+++++|.+++........ .......+++.+++.++.|++.||+|||++ +|+|
T Consensus 100 ---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH 173 (314)
T 2ivs_A 100 ---PLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEM---KLVH 173 (314)
T ss_dssp ---SCEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHT---TEEC
T ss_pred ---ceEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHC---CCcc
Confidence 78999999999999999974321000 001123589999999999999999999987 8999
Q ss_pred cCCCCCCeeecCCCceEEeecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHh-CCCCC
Q 039533 765 CDLKPSNVLLDDYMTARVGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVI-GKKPI 843 (949)
Q Consensus 765 rDlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~ellt-g~~Pf 843 (949)
|||||+||+++.++.+||+|||+++...............+|+.|+|||++.+..++.++|||||||++|||++ |+.||
T Consensus 174 ~dikp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~ 253 (314)
T 2ivs_A 174 RDLAARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPY 253 (314)
T ss_dssp CCCSGGGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSS
T ss_pred cccchheEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCC
Confidence 99999999999999999999999988765544333334457889999999988889999999999999999999 99999
Q ss_pred ccccccCchhhhhccccCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHH
Q 039533 844 DIMFEGDINLHNFGRKALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTN 923 (949)
Q Consensus 844 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~e 923 (949)
....... ..+.+........ ...++..+.+++.+|++.||++|||+.|
T Consensus 254 ~~~~~~~--------------~~~~~~~~~~~~~------------------~~~~~~~~~~li~~~l~~dp~~Rps~~~ 301 (314)
T 2ivs_A 254 PGIPPER--------------LFNLLKTGHRMER------------------PDNCSEEMYRLMLQCWKQEPDKRPVFAD 301 (314)
T ss_dssp TTCCGGG--------------HHHHHHTTCCCCC------------------CTTCCHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred CCCCHHH--------------HHHHhhcCCcCCC------------------CccCCHHHHHHHHHHccCChhhCcCHHH
Confidence 6432211 1111110000000 0123456889999999999999999999
Q ss_pred HHHHHHHhHHh
Q 039533 924 VVHELQSIKNI 934 (949)
Q Consensus 924 v~~~L~~i~~~ 934 (949)
+++.|+++.+.
T Consensus 302 l~~~l~~~~~~ 312 (314)
T 2ivs_A 302 ISKDLEKMMVK 312 (314)
T ss_dssp HHHHHHHHHHT
T ss_pred HHHHHHHHHhh
Confidence 99999998765
No 87
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00 E-value=2e-39 Score=360.89 Aligned_cols=255 Identities=21% Similarity=0.236 Sum_probs=202.3
Q ss_pred cCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCC-----CcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCC
Q 039533 626 SGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQH-----HGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGN 700 (949)
Q Consensus 626 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 700 (949)
++|++.+.||+|+||.||+|++..+++.||||+++... ....+.+.+|+.++++++||||+++++++...+
T Consensus 24 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~---- 99 (351)
T 3c0i_A 24 DVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDG---- 99 (351)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETT----
T ss_pred cceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCC----
Confidence 46899999999999999999999899999999986321 123577999999999999999999999976544
Q ss_pred ccceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCc-
Q 039533 701 DFKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMT- 779 (949)
Q Consensus 701 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~- 779 (949)
..++||||+++++|.+++... ......+++..+..++.|++.||+|||++ +|+||||||+||+++.++.
T Consensus 100 -~~~lv~e~~~g~~L~~~l~~~------~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivHrDlkp~NIl~~~~~~~ 169 (351)
T 3c0i_A 100 -MLYMVFEFMDGADLCFEIVKR------ADAGFVYSEAVASHYMRQILEALRYCHDN---NIIHRDVKPHCVLLASKENS 169 (351)
T ss_dssp -EEEEEEECCSSCBHHHHHHHH------HHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECSSSTT
T ss_pred -EEEEEEeCCCCCCHHHHHHHh------cccCCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChHHeEEecCCCC
Confidence 789999999999999887521 11234589999999999999999999987 9999999999999986554
Q ss_pred --eEEeecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhc
Q 039533 780 --ARVGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFG 857 (949)
Q Consensus 780 --~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~ 857 (949)
+||+|||+++......... ....||+.|+|||++.+..++.++|||||||++|||++|+.||..... ..
T Consensus 170 ~~vkl~Dfg~a~~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~---~~---- 240 (351)
T 3c0i_A 170 APVKLGGFGVAIQLGESGLVA--GGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKE---RL---- 240 (351)
T ss_dssp CCEEECCCTTCEECCTTSCBC--CCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSHH---HH----
T ss_pred CcEEEecCcceeEecCCCeee--cCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcHH---HH----
Confidence 9999999998876543221 235699999999999998999999999999999999999999964211 00
Q ss_pred cccCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 039533 858 RKALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVH 926 (949)
Q Consensus 858 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 926 (949)
...+........+ ......+..+.+++.+|++.||++|||+.|+++
T Consensus 241 -------~~~i~~~~~~~~~----------------~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~ 286 (351)
T 3c0i_A 241 -------FEGIIKGKYKMNP----------------RQWSHISESAKDLVRRMLMLDPAERITVYEALN 286 (351)
T ss_dssp -------HHHHHHTCCCCCH----------------HHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred -------HHHHHcCCCCCCc----------------cccccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 0011111111100 001133556889999999999999999999975
No 88
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00 E-value=1.9e-39 Score=370.45 Aligned_cols=253 Identities=18% Similarity=0.203 Sum_probs=201.6
Q ss_pred hcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCC--cchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCcc
Q 039533 625 TSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHH--GASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDF 702 (949)
Q Consensus 625 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 702 (949)
.++|++.+.||+|+||.||+|.+..+++.||+|++..... ...+.+.+|++++++++||||+++++++.+.+ .
T Consensus 10 ~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~-----~ 84 (444)
T 3soa_A 10 TEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEG-----H 84 (444)
T ss_dssp HHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSS-----E
T ss_pred cCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECC-----E
Confidence 4679999999999999999999999999999999975543 23457889999999999999999999976544 7
Q ss_pred ceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeec---CCCc
Q 039533 703 KASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLD---DYMT 779 (949)
Q Consensus 703 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~---~~~~ 779 (949)
.++||||+++|+|.+++. ....+++.++..++.|++.||+|||++ +|+||||||+||+++ .++.
T Consensus 85 ~~lv~E~~~gg~L~~~i~----------~~~~~~e~~~~~i~~qil~aL~~lH~~---givHrDlKp~NIll~~~~~~~~ 151 (444)
T 3soa_A 85 HYLIFDLVTGGELFEDIV----------AREYYSEADASHCIQQILEAVLHCHQM---GVVHRNLKPENLLLASKLKGAA 151 (444)
T ss_dssp EEEEECCCBCCBHHHHHH----------HCSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSSTTEEESBSSTTCC
T ss_pred EEEEEEeCCCCCHHHHHH----------HcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEeccCCCCc
Confidence 899999999999999986 235689999999999999999999988 999999999999998 5688
Q ss_pred eEEeecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhccc
Q 039533 780 ARVGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRK 859 (949)
Q Consensus 780 ~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~ 859 (949)
+||+|||+|+......... ....||+.|+|||++.+..++.++||||+||++|+|++|+.||....... ....
T Consensus 152 vkL~DFG~a~~~~~~~~~~--~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~~~--~~~~--- 224 (444)
T 3soa_A 152 VKLADFGLAIEVEGEQQAW--FGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHR--LYQQ--- 224 (444)
T ss_dssp EEECCCSSCBCCCTTCCBC--CCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH--HHHH---
T ss_pred EEEccCceeEEecCCCcee--ecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccHHH--HHHH---
Confidence 9999999998765543321 24569999999999999899999999999999999999999995332110 0000
Q ss_pred cCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 039533 860 ALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVH 926 (949)
Q Consensus 860 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 926 (949)
+....... +. +.....+..+.+++.+|++.||++|||+.|+++
T Consensus 225 --------i~~~~~~~-~~---------------~~~~~~s~~~~~li~~~L~~dP~~Rpta~e~L~ 267 (444)
T 3soa_A 225 --------IKAGAYDF-PS---------------PEWDTVTPEAKDLINKMLTINPSKRITAAEALK 267 (444)
T ss_dssp --------HHHTCCCC-CT---------------TTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred --------HHhCCCCC-Cc---------------cccccCCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 00000000 00 000123456789999999999999999999986
No 89
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00 E-value=1.6e-39 Score=352.57 Aligned_cols=274 Identities=20% Similarity=0.268 Sum_probs=199.9
Q ss_pred cCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCC--cchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCccc
Q 039533 626 SGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHH--GASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFK 703 (949)
Q Consensus 626 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 703 (949)
++|++.+.||+|+||+||+|++..+++.||||+++.... ...+.+.+|+.++++++||||+++++++...+ ..
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-----~~ 76 (292)
T 3o0g_A 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDK-----KL 76 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETT-----EE
T ss_pred CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCC-----EE
Confidence 578999999999999999999998999999999975443 23467889999999999999999999976544 78
Q ss_pred eeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEe
Q 039533 704 ASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVG 783 (949)
Q Consensus 704 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~ 783 (949)
++||||+++ ++.+++.. ....+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+
T Consensus 77 ~lv~e~~~~-~l~~~~~~---------~~~~l~~~~~~~~~~ql~~~l~~lH~~---~ivH~dikp~Nil~~~~~~~kl~ 143 (292)
T 3o0g_A 77 TLVFEFCDQ-DLKKYFDS---------CNGDLDPEIVKSFLFQLLKGLGFCHSR---NVLHRDLKPQNLLINRNGELKLA 143 (292)
T ss_dssp EEEEECCSE-EHHHHHHH---------TTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEEC
T ss_pred EEEEecCCC-CHHHHHHh---------CCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEe
Confidence 999999986 55555531 235689999999999999999999988 99999999999999999999999
Q ss_pred ecccceecCCCCCccccccccCccCccCccccCCCc-cCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhcc---c
Q 039533 784 DFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCE-VSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGR---K 859 (949)
Q Consensus 784 DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~---~ 859 (949)
|||.++......... ....||+.|+|||++.+.. ++.++||||+||++|||++|..||..............+ .
T Consensus 144 Dfg~~~~~~~~~~~~--~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i~~~~~~ 221 (292)
T 3o0g_A 144 NFGLARAFGIPVRCY--SAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGT 221 (292)
T ss_dssp CCTTCEECCSCCSCC--CSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCC
T ss_pred ecccceecCCccccc--cCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCC
Confidence 999998765433322 2345899999999988765 799999999999999999998886332211111111111 0
Q ss_pred cCCCchhhhcc-cCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 039533 860 ALPDDVMDIVD-SSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVH 926 (949)
Q Consensus 860 ~~~~~~~~~~d-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 926 (949)
...+......+ +...+.+.. .............+..+.+++.+|++.||++|||++|+++
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 282 (292)
T 3o0g_A 222 PTEEQWPSMTKLPDYKPYPMY-------PATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQ 282 (292)
T ss_dssp CCTTTCTTGGGSTTCCCCCCC-------CTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred CChhhhhhhcccccccccccc-------cCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhc
Confidence 00000000000 000000000 0000000001123456789999999999999999999875
No 90
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00 E-value=2.1e-39 Score=363.86 Aligned_cols=253 Identities=19% Similarity=0.239 Sum_probs=204.5
Q ss_pred hcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCCcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCccce
Q 039533 625 TSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFKA 704 (949)
Q Consensus 625 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 704 (949)
.++|++.+.||+|+||.||+|.+..+++.||+|++..........+.+|++++++++||||+++++++.... ..+
T Consensus 50 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~-----~~~ 124 (387)
T 1kob_A 50 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKY-----EMV 124 (387)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSS-----EEE
T ss_pred ccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCC-----EEE
Confidence 457999999999999999999999899999999998665545567899999999999999999999976544 789
Q ss_pred eEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeec--CCCceEE
Q 039533 705 SVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLD--DYMTARV 782 (949)
Q Consensus 705 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~--~~~~~kl 782 (949)
+||||+++|+|.+++.. ....+++.++..++.|++.||+|||++ +|+||||||+||+++ .++.+||
T Consensus 125 lv~E~~~gg~L~~~l~~---------~~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~vkL 192 (387)
T 1kob_A 125 LILEFLSGGELFDRIAA---------EDYKMSEAEVINYMRQACEGLKHMHEH---SIVHLDIKPENIMCETKKASSVKI 192 (387)
T ss_dssp EEEECCCCCBHHHHTTC---------TTCCBCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSTTCCCEEE
T ss_pred EEEEcCCCCcHHHHHHh---------hcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccchHHeEEecCCCCceEE
Confidence 99999999999999862 234589999999999999999999987 999999999999997 4578999
Q ss_pred eecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhccccCC
Q 039533 783 GDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKALP 862 (949)
Q Consensus 783 ~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~ 862 (949)
+|||+++......... ...||+.|+|||++.+..++.++|||||||++|||++|+.||....... ........
T Consensus 193 ~DFG~a~~~~~~~~~~---~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~-~~~~i~~~--- 265 (387)
T 1kob_A 193 IDFGLATKLNPDEIVK---VTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLE-TLQNVKRC--- 265 (387)
T ss_dssp CCCTTCEECCTTSCEE---EECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHH-HHHHHHHC---
T ss_pred EecccceecCCCccee---eeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCHHH-HHHHHHhC---
Confidence 9999999876543322 3459999999999999999999999999999999999999996432110 00000000
Q ss_pred CchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 039533 863 DDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVH 926 (949)
Q Consensus 863 ~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 926 (949)
....... .....+..+.+++.+|++.||++|||+.|+++
T Consensus 266 ---------~~~~~~~----------------~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~ 304 (387)
T 1kob_A 266 ---------DWEFDED----------------AFSSVSPEAKDFIKNLLQKEPRKRLTVHDALE 304 (387)
T ss_dssp ---------CCCCCSS----------------TTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred ---------CCCCCcc----------------ccccCCHHHHHHHHHHcCCChhHCcCHHHHhh
Confidence 0000000 00123456789999999999999999999986
No 91
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=100.00 E-value=1.3e-38 Score=369.11 Aligned_cols=346 Identities=26% Similarity=0.385 Sum_probs=201.6
Q ss_pred CCCCCceeeccCceeccccCCcccCcccCcEEeeccccccCcCCCCCCCCccceeecCCCccccccccccccCCCCCcEE
Q 039533 87 NLSFLKQLYLQVNSFTHEIPSEIGGLRRLKVLALNNNSICGEIPTNISRCSTLIPIHPQNNQLVGKILSRFSSLSKTEIL 166 (949)
Q Consensus 87 ~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~L~~L~~L 166 (949)
.+++|+.|++++|.+. .+| .+..+++|++|+|++|.+++..| ++++++|++|++++|.+.+..+ |..+++|++|
T Consensus 44 ~l~~l~~L~l~~~~i~-~l~-~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L 117 (466)
T 1o6v_A 44 DLDQVTTLQADRLGIK-SID-GVEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGL 117 (466)
T ss_dssp HHHTCCEEECCSSCCC-CCT-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--GTTCTTCCEE
T ss_pred HhccccEEecCCCCCc-cCc-chhhhcCCCEEECCCCccCCchh--hhccccCCEEECCCCccccChh--hcCCCCCCEE
Confidence 3566777777777776 355 36777777777777777774433 7777777777777777766555 7777777777
Q ss_pred ECCCCCCCCCCCCCcCCCCCccEEeccccccCCCCCCcccCCCccccccccCcccccccccccCCCCChhhhcccccccc
Q 039533 167 NLGSNHLTGSIPSSLGNLSSIHTISLAYNNLDGTIPNSFGWFENLVFLSLAANNLSVVENKLTGEVPSLEKLQRLQHFTI 246 (949)
Q Consensus 167 ~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~l~~~~~~l~~l~~L~~L~l 246 (949)
+|++|.+++..+ +.++++|++|+|++|++++ ++ .++.+++|++|+++ |.+.. ++.+..+
T Consensus 118 ~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~-~~-~~~~l~~L~~L~l~-~~~~~--------~~~~~~l-------- 176 (466)
T 1o6v_A 118 TLFNNQITDIDP--LKNLTNLNRLELSSNTISD-IS-ALSGLTSLQQLSFG-NQVTD--------LKPLANL-------- 176 (466)
T ss_dssp ECCSSCCCCCGG--GTTCTTCSEEEEEEEEECC-CG-GGTTCTTCSEEEEE-ESCCC--------CGGGTTC--------
T ss_pred ECCCCCCCCChH--HcCCCCCCEEECCCCccCC-Ch-hhccCCcccEeecC-CcccC--------chhhccC--------
Confidence 777777775433 7777777777777777774 33 36777777777765 32221 1123333
Q ss_pred ccCCCCCCCCCCcchhccccccCcccEEEccCCCCCccCCchhhcccccccEEEccCccccCCCCCCCCCCCcccEEEee
Q 039533 247 TSNSLGSGGNDDLSFLCSLTNATRLTWMHINSNNFGGLLPGCISNLSKTIKTLFLNNNKIYGSIPAGIGNFVNLQRLDMW 326 (949)
Q Consensus 247 ~~N~l~~~~~~~~~~~~~l~~~~~L~~L~L~~N~l~~~~p~~~~~l~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~ 326 (949)
++|++|++++|.+++. ..+..+ ++|++|++++|++++..| ++.+++|++|+++
T Consensus 177 ----------------------~~L~~L~l~~n~l~~~--~~l~~l-~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~ 229 (466)
T 1o6v_A 177 ----------------------TTLERLDISSNKVSDI--SVLAKL-TNLESLIATNNQISDITP--LGILTNLDELSLN 229 (466)
T ss_dssp ----------------------TTCCEEECCSSCCCCC--GGGGGC-TTCSEEECCSSCCCCCGG--GGGCTTCCEEECC
T ss_pred ----------------------CCCCEEECcCCcCCCC--hhhccC-CCCCEEEecCCccccccc--ccccCCCCEEECC
Confidence 3444444444444332 123333 245555555555554433 4555566666666
Q ss_pred cceecccCCCcccccCCCCEEecCCcccccccCcccccccccceeecccccccccCCCCCCCCCCCcEEEeeCccccCCC
Q 039533 327 NNQLSGTIPPAIGELQNLKILGLNRNKLSGNIPPSIGNLKMLLNLFLNDNFLEVSIPSSLGQCESLIEINLSNNNLSGTI 406 (949)
Q Consensus 327 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~ 406 (949)
+|++++. +.+..+++|+.|++++|++++..| +.++++|+.|++++|.+++..+ +..+++|++|++++|++++..
T Consensus 230 ~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~ 303 (466)
T 1o6v_A 230 GNQLKDI--GTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDIS 303 (466)
T ss_dssp SSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCSCCG
T ss_pred CCCcccc--hhhhcCCCCCEEECCCCccccchh--hhcCCCCCEEECCCCccCcccc--ccCCCccCeEEcCCCcccCch
Confidence 6666532 245556666666666666654433 5556666666666666654333 555666666666666665332
Q ss_pred CCcccCCcccceeeccCCCccCCCCccccccccccceeeeccccccccCCcccccccchhhcccCccccccccCCCcCCC
Q 039533 407 PPQFFSLSSLSISLDWSRNKLTGSLPIEVGKLKILEFLYVYENRLEGEIPSTFGNCIRLEQLGMGGNLFQGPISSSLGSL 486 (949)
Q Consensus 407 p~~~~~l~~l~~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l 486 (949)
| +..+++| +.|++++|++++..| +..+++|+.|++++|++++. ..+.++++|+.|++++|++++..| +..+
T Consensus 304 ~--~~~l~~L-~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l 374 (466)
T 1o6v_A 304 P--ISNLKNL-TYLTLYFNNISDISP--VSSLTKLQRLFFYNNKVSDV--SSLANLTNINWLSAGHNQISDLTP--LANL 374 (466)
T ss_dssp G--GGGCTTC-SEEECCSSCCSCCGG--GGGCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCBCGG--GTTC
T ss_pred h--hcCCCCC-CEEECcCCcCCCchh--hccCccCCEeECCCCccCCc--hhhccCCCCCEEeCCCCccCccch--hhcC
Confidence 2 4444555 455555555554433 45556666666666666543 345556666666666666655554 5556
Q ss_pred CCCCEEECCCCcCCC
Q 039533 487 RGLRVLDLSQNNLSG 501 (949)
Q Consensus 487 ~~L~~L~Ls~N~l~~ 501 (949)
++|+.|++++|++++
T Consensus 375 ~~L~~L~l~~n~~~~ 389 (466)
T 1o6v_A 375 TRITQLGLNDQAWTN 389 (466)
T ss_dssp TTCCEEECCCEEEEC
T ss_pred CCCCEEeccCCcccC
Confidence 666666666666654
No 92
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00 E-value=7.6e-40 Score=360.75 Aligned_cols=274 Identities=24% Similarity=0.384 Sum_probs=195.2
Q ss_pred HhcCCCCCCeeeeecCceEEEEEEcCCCE---EEEEEEEecC--CCcchHHHHHHHHHHHhcCCCcceeEEeeeeccccc
Q 039533 624 ATSGFSSANLVGVGSFGSVYKGIIDEGRT---TIAVKVFNLQ--HHGASRSFIAECKALKSIRHRNLVKVLTACLGADYR 698 (949)
Q Consensus 624 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~---~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 698 (949)
..++|++.+.||+|+||.||+|++..++. .||||+++.. .....+++.+|++++++++||||+++++++......
T Consensus 21 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 100 (323)
T 3qup_A 21 PEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAK 100 (323)
T ss_dssp C---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC---
T ss_pred ChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeeccccc
Confidence 45689999999999999999999876554 7999998754 233457899999999999999999999998755421
Q ss_pred C-CccceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCC
Q 039533 699 G-NDFKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDY 777 (949)
Q Consensus 699 ~-~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~ 777 (949)
+ ....++||||+++|+|.+++..... ......+++.++..++.|++.||+|||++ +|+||||||+||+++++
T Consensus 101 ~~~~~~~~v~e~~~~~~L~~~l~~~~~----~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~ivH~Dikp~NIli~~~ 173 (323)
T 3qup_A 101 GRLPIPMVILPFMKHGDLHAFLLASRI----GENPFNLPLQTLVRFMVDIACGMEYLSSR---NFIHRDLAARNCMLAED 173 (323)
T ss_dssp ----CEEEEEECCTTCBHHHHHHHHHC-------CCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTT
T ss_pred cCCCccEEEEEeccCCcHHHHHHhhhc----cccccccCHHHHHHHHHHHHHHHHHHHcC---CcccCCCCcceEEEcCC
Confidence 1 1123899999999999999862211 11233689999999999999999999988 89999999999999999
Q ss_pred CceEEeecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHh-CCCCCccccccCchhhhh
Q 039533 778 MTARVGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVI-GKKPIDIMFEGDINLHNF 856 (949)
Q Consensus 778 ~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~ellt-g~~Pf~~~~~~~~~~~~~ 856 (949)
+.+||+|||+++...............+++.|+|||++.+..++.++|||||||++|||++ |+.||........ .
T Consensus 174 ~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~--~-- 249 (323)
T 3qup_A 174 MTVCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEI--Y-- 249 (323)
T ss_dssp SCEEECCCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGH--H--
T ss_pred CCEEEeeccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChHHH--H--
Confidence 9999999999987655443333334457889999999998889999999999999999999 9999864322110 0
Q ss_pred ccccCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHHhHHhhc
Q 039533 857 GRKALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHELQSIKNILL 936 (949)
Q Consensus 857 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~~~~~ 936 (949)
..+........+ ..++..+.+++.+|++.||++|||+.|+++.|+++.+...
T Consensus 250 ---------~~~~~~~~~~~~-------------------~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~~~ 301 (323)
T 3qup_A 250 ---------NYLIGGNRLKQP-------------------PECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILGHLS 301 (323)
T ss_dssp ---------HHHHTTCCCCCC-------------------TTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC--
T ss_pred ---------HHHhcCCCCCCC-------------------CccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHhh
Confidence 000100000000 1234568899999999999999999999999999876543
No 93
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00 E-value=2.3e-39 Score=361.41 Aligned_cols=253 Identities=19% Similarity=0.252 Sum_probs=202.5
Q ss_pred hcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCC--cchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCcc
Q 039533 625 TSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHH--GASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDF 702 (949)
Q Consensus 625 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 702 (949)
.++|++.+.||+|+||.||+|.+..+++.||+|++..... ...+.+.+|+.++++++||||+++++++.+.+ .
T Consensus 28 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~-----~ 102 (362)
T 2bdw_A 28 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEES-----F 102 (362)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSS-----E
T ss_pred ccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCC-----E
Confidence 4679999999999999999999998999999999975433 23467889999999999999999999976544 7
Q ss_pred ceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCC---Cc
Q 039533 703 KASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDY---MT 779 (949)
Q Consensus 703 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~---~~ 779 (949)
.++||||+++|+|.+++. ....+++.++..++.||+.||+|||++ +|+||||||+||+++.+ +.
T Consensus 103 ~~lv~e~~~gg~L~~~l~----------~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~ 169 (362)
T 2bdw_A 103 HYLVFDLVTGGELFEDIV----------AREFYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAA 169 (362)
T ss_dssp EEEEECCCCSCBHHHHHT----------TCSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEESCSSTTCC
T ss_pred EEEEEecCCCCCHHHHHH----------HcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCC
Confidence 899999999999999986 234589999999999999999999988 99999999999999864 45
Q ss_pred eEEeecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhccc
Q 039533 780 ARVGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRK 859 (949)
Q Consensus 780 ~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~ 859 (949)
+||+|||+++........ ....||+.|+|||++.+..++.++|||||||++|||++|+.||...... ....
T Consensus 170 ~kl~DfG~a~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~--~~~~---- 240 (362)
T 2bdw_A 170 VKLADFGLAIEVNDSEAW---HGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQH--RLYA---- 240 (362)
T ss_dssp EEECCCTTCBCCTTCCSC---CCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHH----
T ss_pred EEEeecCcceEecCCccc---ccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHH--HHHH----
Confidence 999999999876544322 2356999999999999989999999999999999999999999633111 0000
Q ss_pred cCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHH
Q 039533 860 ALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHE 927 (949)
Q Consensus 860 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 927 (949)
.+....... +. . .....+..+.+++.+|++.||++|||+.|+++.
T Consensus 241 -------~i~~~~~~~-~~------------~---~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 285 (362)
T 2bdw_A 241 -------QIKAGAYDY-PS------------P---EWDTVTPEAKSLIDSMLTVNPKKRITADQALKV 285 (362)
T ss_dssp -------HHHHTCCCC-CT------------T---GGGGSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred -------HHHhCCCCC-Cc------------c---cccCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 000000000 00 0 001234567899999999999999999998753
No 94
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00 E-value=1.6e-39 Score=364.62 Aligned_cols=252 Identities=21% Similarity=0.255 Sum_probs=197.1
Q ss_pred hcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCC---CcchHHHHHHHHHHHhc-CCCcceeEEeeeecccccCC
Q 039533 625 TSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQH---HGASRSFIAECKALKSI-RHRNLVKVLTACLGADYRGN 700 (949)
Q Consensus 625 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~ 700 (949)
.++|++.++||+|+||.||+|++..+++.||+|+++... ....+.+.+|..++.++ +||||+++++++...+
T Consensus 51 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~---- 126 (396)
T 4dc2_A 51 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTES---- 126 (396)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSS----
T ss_pred hhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECC----
Confidence 467999999999999999999999999999999997543 22345688999999887 8999999999976544
Q ss_pred ccceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCce
Q 039533 701 DFKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTA 780 (949)
Q Consensus 701 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~ 780 (949)
..++||||+++|+|.+++. ....+++..++.++.||+.||+|||++ +|+||||||+|||++.++++
T Consensus 127 -~~~lV~E~~~gg~L~~~l~----------~~~~l~~~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~i 192 (396)
T 4dc2_A 127 -RLFFVIEYVNGGDLMFHMQ----------RQRKLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHI 192 (396)
T ss_dssp -EEEEEEECCTTCBHHHHHH----------HHSSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCE
T ss_pred -EEEEEEEcCCCCcHHHHHH----------HcCCCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEECCCCCE
Confidence 7899999999999999986 235689999999999999999999988 99999999999999999999
Q ss_pred EEeecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhcccc
Q 039533 781 RVGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKA 860 (949)
Q Consensus 781 kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~ 860 (949)
||+|||+|+........ .....||+.|+|||++.+..++.++|||||||++|||++|+.||......+.... .
T Consensus 193 kL~DFGla~~~~~~~~~--~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~-----~ 265 (396)
T 4dc2_A 193 KLTDYGMCKEGLRPGDT--TSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQ-----N 265 (396)
T ss_dssp EECCCTTCBCCCCTTCC--BCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC-----------C
T ss_pred EEeecceeeecccCCCc--cccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccch-----h
Confidence 99999999863332221 2245699999999999999999999999999999999999999963321110000 0
Q ss_pred CCCchh-hhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCH
Q 039533 861 LPDDVM-DIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNM 921 (949)
Q Consensus 861 ~~~~~~-~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~ 921 (949)
..+... .+...... .+ ...+..+.+++.+|++.||++||++
T Consensus 266 ~~~~~~~~i~~~~~~-~p-------------------~~~s~~~~~li~~lL~~dP~~R~~~ 307 (396)
T 4dc2_A 266 TEDYLFQVILEKQIR-IP-------------------RSLSVKAASVLKSFLNKDPKERLGC 307 (396)
T ss_dssp CHHHHHHHHHHCCCC-CC-------------------TTSCHHHHHHHHHHTCSCTTTSTTC
T ss_pred hHHHHHHHHhccccC-CC-------------------CcCCHHHHHHHHHHhcCCHhHcCCC
Confidence 000000 01111000 00 1234567899999999999999996
No 95
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00 E-value=1.3e-39 Score=352.59 Aligned_cols=261 Identities=28% Similarity=0.431 Sum_probs=193.6
Q ss_pred hcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCC--cchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCcc
Q 039533 625 TSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHH--GASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDF 702 (949)
Q Consensus 625 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 702 (949)
.++|++.+.||+|+||.||+|++. ..||||+++.... ...+.+.+|++++++++||||+++++++.. ..
T Consensus 23 ~~~y~~~~~lG~G~~g~Vy~~~~~---~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~------~~ 93 (289)
T 3og7_A 23 DGQITVGQRIGSGSFGTVYKGKWH---GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTA------PQ 93 (289)
T ss_dssp TTSCEEEEEEEECSSEEEEEEESS---SEEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS------SS
T ss_pred ccceeeeeEecCCCCeEEEEEEEc---CceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeeccC------Cc
Confidence 467999999999999999999875 3599999975443 234678999999999999999999997532 25
Q ss_pred ceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEE
Q 039533 703 KASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARV 782 (949)
Q Consensus 703 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl 782 (949)
.++||||+++++|.+++.. ....+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||
T Consensus 94 ~~lv~e~~~~~~L~~~l~~---------~~~~~~~~~~~~i~~qi~~~L~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl 161 (289)
T 3og7_A 94 LAIVTQWCEGSSLYHHLHA---------SETKFEMKKLIDIARQTARGMDYLHAK---SIIHRDLKSNNIFLHEDNTVKI 161 (289)
T ss_dssp CEEEEECCCEEEHHHHHTT---------C---CCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEETTTEEEE
T ss_pred cEEEEEecCCCcHHHHHhh---------ccCCCCHHHHHHHHHHHHHHHHHHHhC---CcccccCccceEEECCCCCEEE
Confidence 7999999999999999962 235589999999999999999999987 8999999999999999999999
Q ss_pred eecccceecCCCCCccccccccCccCccCccccC---CCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhccc
Q 039533 783 GDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGV---GCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRK 859 (949)
Q Consensus 783 ~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~ 859 (949)
+|||+++...............||+.|+|||++. +..++.++||||||+++|||++|+.||......+.........
T Consensus 162 ~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~ 241 (289)
T 3og7_A 162 GDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRG 241 (289)
T ss_dssp CCCC------------------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHHHHHHHHHHT
T ss_pred ccceeccccccccccccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHHHHHHHhccc
Confidence 9999998665433322223456999999999986 5568889999999999999999999996432211111100010
Q ss_pred cCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHHhHH
Q 039533 860 ALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHELQSIKN 933 (949)
Q Consensus 860 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~~ 933 (949)
......... ...++..+.+++.+|++.||++|||++|+++.|+++.+
T Consensus 242 ~~~~~~~~~---------------------------~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~l~~ 288 (289)
T 3og7_A 242 SLSPDLSKV---------------------------RSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELAR 288 (289)
T ss_dssp SCCCCTTSS---------------------------CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC
T ss_pred ccCcchhhc---------------------------cccCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHhh
Confidence 111000000 01335678999999999999999999999999998754
No 96
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00 E-value=5.3e-39 Score=353.24 Aligned_cols=284 Identities=19% Similarity=0.204 Sum_probs=210.9
Q ss_pred cCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCC-CcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCccce
Q 039533 626 SGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQH-HGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFKA 704 (949)
Q Consensus 626 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 704 (949)
++|.+.+.||+|+||+||+|++..+++.||||+++... ....+.+.+|++++++++||||+++++++.... ....+
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~---~~~~~ 85 (319)
T 4euu_A 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETT---TRHKV 85 (319)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTT---TCCEE
T ss_pred CCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCC---CceEE
Confidence 56889999999999999999999889999999997543 233567889999999999999999999876432 33679
Q ss_pred eEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeee----cCCCce
Q 039533 705 SVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLL----DDYMTA 780 (949)
Q Consensus 705 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll----~~~~~~ 780 (949)
+||||+++++|.+++.... ....+++.+++.++.|++.||+|||++ +|+||||||+||++ +.++.+
T Consensus 86 lv~e~~~~~~L~~~l~~~~-------~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~ 155 (319)
T 4euu_A 86 LIMEFCPCGSLYTVLEEPS-------NAYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVY 155 (319)
T ss_dssp EEEECCTTCBHHHHHHSGG-------GTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEECTTSCEEE
T ss_pred EEEeCCCCCCHHHHHHHhc-------cccCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEEeccCCCCceE
Confidence 9999999999999997321 223489999999999999999999988 99999999999999 788889
Q ss_pred EEeecccceecCCCCCccccccccCccCccCccccC--------CCccCCccchHHHHHHHHHHHhCCCCCccccccCc-
Q 039533 781 RVGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGV--------GCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDI- 851 (949)
Q Consensus 781 kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~--------~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~- 851 (949)
||+|||+++......... ...||..|+|||++. +..++.++|||||||++|||++|+.||........
T Consensus 156 kL~Dfg~a~~~~~~~~~~---~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~ 232 (319)
T 4euu_A 156 KLTDFGAARELEDDEQFV---SLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRN 232 (319)
T ss_dssp EECCCTTCEECCTTCCBC---CCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGC
T ss_pred EEccCCCceecCCCCcee---ecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchh
Confidence 999999998876544322 345999999999875 56789999999999999999999999964322111
Q ss_pred -hhhhhccccCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHH
Q 039533 852 -NLHNFGRKALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHELQS 930 (949)
Q Consensus 852 -~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~ 930 (949)
..........+......+......... ... ...............+.+++.+|++.||++|||++|+++...+
T Consensus 233 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~--~~~----~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d 306 (319)
T 4euu_A 233 KEVMYKIITGKPSGAISGVQKAENGPID--WSG----DMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSD 306 (319)
T ss_dssp HHHHHHHHHHCCTTCCEEEECSTTCCEE--EES----SCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHH
T ss_pred HHHHHHHhcCCCcccchhhhcccCCccc--cCc----cCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHH
Confidence 111111111111100000000000000 000 0000001124567788999999999999999999999998876
Q ss_pred h
Q 039533 931 I 931 (949)
Q Consensus 931 i 931 (949)
.
T Consensus 307 ~ 307 (319)
T 4euu_A 307 I 307 (319)
T ss_dssp H
T ss_pred H
Confidence 4
No 97
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00 E-value=8.5e-40 Score=362.55 Aligned_cols=290 Identities=21% Similarity=0.301 Sum_probs=206.5
Q ss_pred hcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCCcchHHHHHHHHH--HHhcCCCcceeEEeeeecccccCCcc
Q 039533 625 TSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHGASRSFIAECKA--LKSIRHRNLVKVLTACLGADYRGNDF 702 (949)
Q Consensus 625 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~--l~~l~h~niv~~~~~~~~~~~~~~~~ 702 (949)
.++|++.+.||+|+||.||+|+. +++.||||+++... ...+..|.++ +..++||||+++++++......+...
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~---~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~ 86 (336)
T 3g2f_A 12 LDNLKLLELIGRGRYGAVYKGSL--DERPVAVKVFSFAN---RQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRME 86 (336)
T ss_dssp TTSEEEEEEEEECSSEEEEEEEE--TTEEEEEEEEEGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEE
T ss_pred hHHhheeeecccCCCeEEEEEEE--CCeEEEEEEeeccc---hhhHHHHHHHHHHHhccCcchhhheecccccccCCCce
Confidence 46899999999999999999987 47999999997443 2344444444 45589999999998776555555667
Q ss_pred ceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCC------CCCeEecCCCCCCeeecC
Q 039533 703 KASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDC------QPVTAHCDLKPSNVLLDD 776 (949)
Q Consensus 703 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~------~~~ivHrDlkp~NIll~~ 776 (949)
.++||||+++|+|.+++.. ...++..+..++.|++.||+|||+.+ .++|+||||||+||+++.
T Consensus 87 ~~lv~e~~~~g~L~~~l~~-----------~~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~ 155 (336)
T 3g2f_A 87 YLLVMEYYPNGSLXKYLSL-----------HTSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKN 155 (336)
T ss_dssp EEEEECCCTTCBHHHHHHH-----------CCBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECT
T ss_pred EEEEEecCCCCcHHHHHhh-----------cccchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcC
Confidence 8999999999999999962 33588899999999999999999652 228999999999999999
Q ss_pred CCceEEeecccceecCCCCC------ccccccccCccCccCccccCC-------CccCCccchHHHHHHHHHHHhCCCCC
Q 039533 777 YMTARVGDFGLARILSPDHT------QTSSFSVKGSLGYIAPEYGVG-------CEVSTNGDVYSYGILLLELVIGKKPI 843 (949)
Q Consensus 777 ~~~~kl~DfG~a~~~~~~~~------~~~~~~~~gt~~y~aPE~~~~-------~~~~~~sDiwSlGvvl~elltg~~Pf 843 (949)
++.+||+|||+++....... ........||+.|+|||++.+ ..++.++|||||||++|||++|..||
T Consensus 156 ~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~ 235 (336)
T 3g2f_A 156 DGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDL 235 (336)
T ss_dssp TSCEEECCCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGG
T ss_pred CCcEEEeeccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcC
Confidence 99999999999987654321 111223469999999999887 45778999999999999999998776
Q ss_pred ccccccCchhhhhcccc-CCC---chhhhcc-cCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCC
Q 039533 844 DIMFEGDINLHNFGRKA-LPD---DVMDIVD-SSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDR 918 (949)
Q Consensus 844 ~~~~~~~~~~~~~~~~~-~~~---~~~~~~d-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~R 918 (949)
............+.... ... .....+. ....+.. ...+.....++..+.+++.+||+.||++|
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~l~~li~~cl~~dP~~R 303 (336)
T 3g2f_A 236 FPGESVPEYQMAFQTEVGNHPTFEDMQVLVSREKQRPKF------------PEAWKENSLAVRSLKETIEDCWDQDAEAR 303 (336)
T ss_dssp STTSCCCCCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCC------------CTTCCCCSHHHHHHHHHHHHHSCSSGGGS
T ss_pred CCccchhHHHHhhhcccCCCchHHHHHhhhcccccCCCC------------CcccccccchHHHHHHHHHHHhcCChhhC
Confidence 43221111000000000 000 0000000 0000000 01111112456789999999999999999
Q ss_pred CCHHHHHHHHHHhHHhhccCCCCC
Q 039533 919 TNMTNVVHELQSIKNILLGVELCP 942 (949)
Q Consensus 919 Ps~~ev~~~L~~i~~~~~~~~~~~ 942 (949)
||++||++.|+++...+.+....+
T Consensus 304 ps~~e~l~~L~~ll~~~~~~~~~~ 327 (336)
T 3g2f_A 304 LTAQXAEERMAELMMIWERNKSVS 327 (336)
T ss_dssp CCHHHHHHHHHHHHHCCCC-----
T ss_pred cchHHHHHHHHHHHHHHHhcccCC
Confidence 999999999999999888775443
No 98
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00 E-value=6.7e-40 Score=363.70 Aligned_cols=250 Identities=24% Similarity=0.284 Sum_probs=197.6
Q ss_pred HhcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecC---CCcchHHHHHHHHHHHhc-CCCcceeEEeeeecccccC
Q 039533 624 ATSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQ---HHGASRSFIAECKALKSI-RHRNLVKVLTACLGADYRG 699 (949)
Q Consensus 624 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~ 699 (949)
..++|++.++||+|+||.||+|++..+++.||||+++.. .....+.+.+|..+++++ +||||+++++++...+
T Consensus 21 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~--- 97 (353)
T 3txo_A 21 GIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPD--- 97 (353)
T ss_dssp --CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSS---
T ss_pred chhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCC---
Confidence 457899999999999999999999989999999999743 223346788999999998 7999999999976544
Q ss_pred CccceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCc
Q 039533 700 NDFKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMT 779 (949)
Q Consensus 700 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~ 779 (949)
..++||||+++|+|.+++. ....+++..++.++.|++.||+|||++ +|+||||||+|||++.+++
T Consensus 98 --~~~lv~E~~~gg~L~~~l~----------~~~~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NILl~~~g~ 162 (353)
T 3txo_A 98 --RLFFVMEFVNGGDLMFHIQ----------KSRRFDEARARFYAAEIISALMFLHDK---GIIYRDLKLDNVLLDHEGH 162 (353)
T ss_dssp --EEEEEEECCCSCBHHHHHH----------HHSSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSC
T ss_pred --EEEEEEeCCCCCcHHHHHH----------HcCCCCHHHHHHHHHHHHHHHHHHHHC---CCcccCCCHHHEEECCCCC
Confidence 7899999999999999996 235689999999999999999999987 9999999999999999999
Q ss_pred eEEeecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhccc
Q 039533 780 ARVGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRK 859 (949)
Q Consensus 780 ~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~ 859 (949)
+||+|||+|+........ .....||+.|+|||++.+..++.++|||||||++|||++|+.||......+ .
T Consensus 163 ikL~DFG~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~--~------ 232 (353)
T 3txo_A 163 CKLADFGMCKEGICNGVT--TATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDD--L------ 232 (353)
T ss_dssp EEECCCTTCBCSCC-----------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSHHH--H------
T ss_pred EEEccccceeecccCCcc--ccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCHHH--H------
Confidence 999999999864333222 224569999999999998889999999999999999999999996432111 0
Q ss_pred cCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCH------HHHHH
Q 039533 860 ALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNM------TNVVH 926 (949)
Q Consensus 860 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~------~ev~~ 926 (949)
...+....... + ...+..+.+++.+|++.||++||++ .|+++
T Consensus 233 -----~~~i~~~~~~~-p-------------------~~~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~ 280 (353)
T 3txo_A 233 -----FEAILNDEVVY-P-------------------TWLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILR 280 (353)
T ss_dssp -----HHHHHHCCCCC-C-------------------TTSCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHT
T ss_pred -----HHHHHcCCCCC-C-------------------CCCCHHHHHHHHHHhhhCHHHccCCcccCCHHHHhh
Confidence 00111111000 0 0123457889999999999999998 66654
No 99
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00 E-value=2.9e-39 Score=361.35 Aligned_cols=251 Identities=22% Similarity=0.314 Sum_probs=201.0
Q ss_pred hcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCC---CcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCc
Q 039533 625 TSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQH---HGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGND 701 (949)
Q Consensus 625 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 701 (949)
.++|.+.+.||+|+||.||+|++..+++.||+|++.... ....+.+.+|+.++++++||||+++++++...+
T Consensus 14 ~~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~----- 88 (384)
T 4fr4_A 14 FDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEE----- 88 (384)
T ss_dssp GGGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSS-----
T ss_pred hHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCC-----
Confidence 367899999999999999999999999999999996432 334567889999999999999999999976554
Q ss_pred cceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceE
Q 039533 702 FKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTAR 781 (949)
Q Consensus 702 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~k 781 (949)
..++||||+++|+|.+++. ....+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+|
T Consensus 89 ~~~lv~e~~~gg~L~~~l~----------~~~~l~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vk 155 (384)
T 4fr4_A 89 DMFMVVDLLLGGDLRYHLQ----------QNVHFKEETVKLFICELVMALDYLQNQ---RIIHRDMKPDNILLDEHGHVH 155 (384)
T ss_dssp EEEEEECCCTTEEHHHHHH----------TTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEE
T ss_pred EEEEEEecCCCCcHHHHHH----------hcCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCcHHHeEECCCCCEE
Confidence 7899999999999999996 234689999999999999999999988 999999999999999999999
Q ss_pred EeecccceecCCCCCccccccccCccCccCccccCC---CccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhcc
Q 039533 782 VGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVG---CEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGR 858 (949)
Q Consensus 782 l~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~ 858 (949)
|+|||+|+........ ....||+.|+|||++.+ ..++.++|||||||++|||++|+.||......... .
T Consensus 156 L~DFG~a~~~~~~~~~---~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~--~--- 227 (384)
T 4fr4_A 156 ITDFNIAAMLPRETQI---TTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSK--E--- 227 (384)
T ss_dssp ECCCTTCEECCTTCCB---CCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCHH--H---
T ss_pred EeccceeeeccCCCce---eccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCccHH--H---
Confidence 9999999887544332 24569999999999874 45899999999999999999999999633211100 0
Q ss_pred ccCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCC-HHHHHH
Q 039533 859 KALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTN-MTNVVH 926 (949)
Q Consensus 859 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs-~~ev~~ 926 (949)
....+.......+ ...+..+.+++.+|++.||++||+ +++|.+
T Consensus 228 ------~~~~~~~~~~~~p-------------------~~~s~~~~~li~~lL~~dP~~R~s~~~~l~~ 271 (384)
T 4fr4_A 228 ------IVHTFETTVVTYP-------------------SAWSQEMVSLLKKLLEPNPDQRFSQLSDVQN 271 (384)
T ss_dssp ------HHHHHHHCCCCCC-------------------TTSCHHHHHHHHHHSCSSGGGSCCSHHHHHT
T ss_pred ------HHHHHhhcccCCC-------------------CcCCHHHHHHHHHHhcCCHhHhcccHHHHHc
Confidence 0000000000001 122456789999999999999998 666543
No 100
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00 E-value=2.7e-39 Score=364.54 Aligned_cols=275 Identities=23% Similarity=0.340 Sum_probs=214.7
Q ss_pred hcCCCCCCeeeeecCceEEEEEEcC-------CCEEEEEEEEecCCC-cchHHHHHHHHHHHhc-CCCcceeEEeeeecc
Q 039533 625 TSGFSSANLVGVGSFGSVYKGIIDE-------GRTTIAVKVFNLQHH-GASRSFIAECKALKSI-RHRNLVKVLTACLGA 695 (949)
Q Consensus 625 ~~~y~~~~~lg~G~~g~Vy~~~~~~-------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~ 695 (949)
.++|.+.+.||+|+||.||+|++.. .+..||||+++.... ...+++.+|+++++++ +||||+++++++...
T Consensus 68 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~ 147 (382)
T 3tt0_A 68 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD 147 (382)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred hhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeeccC
Confidence 4678889999999999999999742 346899999975433 2346789999999999 899999999997654
Q ss_pred cccCCccceeEeeeccCCChhhhcCCCCCCC------ccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCC
Q 039533 696 DYRGNDFKASVYEFMHYGSLEEWLHPFTGED------EIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKP 769 (949)
Q Consensus 696 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~------~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp 769 (949)
+ ..++||||+++|+|.+++....... ........+++.+++.|+.|++.||+|||++ +|+||||||
T Consensus 148 ~-----~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp 219 (382)
T 3tt0_A 148 G-----PLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDLAA 219 (382)
T ss_dssp S-----SCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCG
T ss_pred C-----ceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCc
Confidence 4 7899999999999999997432110 0011234699999999999999999999987 999999999
Q ss_pred CCeeecCCCceEEeecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHh-CCCCCccccc
Q 039533 770 SNVLLDDYMTARVGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVI-GKKPIDIMFE 848 (949)
Q Consensus 770 ~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~ellt-g~~Pf~~~~~ 848 (949)
+||+++.++.+||+|||+|+...............+|+.|+|||++.+..++.++|||||||++|||++ |+.||.....
T Consensus 220 ~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~~ 299 (382)
T 3tt0_A 220 RNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPV 299 (382)
T ss_dssp GGEEECTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH
T ss_pred ceEEEcCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCH
Confidence 999999999999999999987765443333334457899999999999999999999999999999999 9999864321
Q ss_pred cCchhhhhccccCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHH
Q 039533 849 GDINLHNFGRKALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHEL 928 (949)
Q Consensus 849 ~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L 928 (949)
.. . .+.+........ ...++..+.+++.+||+.||++|||++||++.|
T Consensus 300 ~~--~------------~~~~~~~~~~~~------------------~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L 347 (382)
T 3tt0_A 300 EE--L------------FKLLKEGHRMDK------------------PSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 347 (382)
T ss_dssp HH--H------------HHHHHTTCCCCC------------------CSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred HH--H------------HHHHHcCCCCCC------------------CccCCHHHHHHHHHHcCCChhhCcCHHHHHHHH
Confidence 10 1 111111000000 012345688999999999999999999999999
Q ss_pred HHhHHhhccCC
Q 039533 929 QSIKNILLGVE 939 (949)
Q Consensus 929 ~~i~~~~~~~~ 939 (949)
+++.......+
T Consensus 348 ~~~~~~~~~~~ 358 (382)
T 3tt0_A 348 DRIVALTSNQE 358 (382)
T ss_dssp HHHHHHSCSCC
T ss_pred HHHHHHHhcCC
Confidence 99987765543
No 101
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00 E-value=2.7e-39 Score=354.93 Aligned_cols=282 Identities=22% Similarity=0.301 Sum_probs=190.0
Q ss_pred HhcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCC-cchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCcc
Q 039533 624 ATSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHH-GASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDF 702 (949)
Q Consensus 624 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 702 (949)
..++|++.+.||+|+||.||+|.+..+++.||+|+++.... ...+.+.+|++++++++||||+++++++...+ .
T Consensus 3 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-----~ 77 (317)
T 2pmi_A 3 SSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTEN-----K 77 (317)
T ss_dssp ----------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTT-----E
T ss_pred cccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECC-----e
Confidence 35689999999999999999999998899999999975432 34467889999999999999999999976543 7
Q ss_pred ceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEE
Q 039533 703 KASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARV 782 (949)
Q Consensus 703 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl 782 (949)
.++||||++ |+|.+++..... ......+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||
T Consensus 78 ~~lv~e~~~-~~L~~~l~~~~~----~~~~~~~~~~~~~~~~~qi~~aL~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl 149 (317)
T 2pmi_A 78 LTLVFEFMD-NDLKKYMDSRTV----GNTPRGLELNLVKYFQWQLLQGLAFCHEN---KILHRDLKPQNLLINKRGQLKL 149 (317)
T ss_dssp EEEEEECCC-CBHHHHHHHHHS----SSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEE
T ss_pred EEEEEEecC-CCHHHHHHhccc----cccccCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCChHHeEEcCCCCEEE
Confidence 899999998 599998862211 11234589999999999999999999987 9999999999999999999999
Q ss_pred eecccceecCCCCCccccccccCccCccCccccCCC-ccCCccchHHHHHHHHHHHhCCCCCccccccCch--hhhhccc
Q 039533 783 GDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGC-EVSTNGDVYSYGILLLELVIGKKPIDIMFEGDIN--LHNFGRK 859 (949)
Q Consensus 783 ~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~--~~~~~~~ 859 (949)
+|||+++......... ....||+.|+|||++.+. .++.++|||||||++|||++|+.||......+.. .......
T Consensus 150 ~Dfg~~~~~~~~~~~~--~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~ 227 (317)
T 2pmi_A 150 GDFGLARAFGIPVNTF--SSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGT 227 (317)
T ss_dssp CCCSSCEETTSCCCCC--CCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCS
T ss_pred CcCccceecCCCcccC--CCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCC
Confidence 9999998765432221 134589999999998764 5899999999999999999999999643221100 0000000
Q ss_pred cCCCchhhh-----cccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 039533 860 ALPDDVMDI-----VDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVH 926 (949)
Q Consensus 860 ~~~~~~~~~-----~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 926 (949)
......... ..+............. .........+..+.+++.+|++.||++|||++|+++
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~ 293 (317)
T 2pmi_A 228 PNESLWPSVTKLPKYNPNIQQRPPRDLRQV------LQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALH 293 (317)
T ss_dssp CCTTTCGGGGGCTTCCTTCCCCCCCCSHHH------HGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred CChhHhhhhhhhhhcccccccccchhHHHh------hcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhC
Confidence 000000000 0000000000000000 000000123456889999999999999999999875
No 102
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00 E-value=7.7e-40 Score=369.34 Aligned_cols=261 Identities=19% Similarity=0.229 Sum_probs=205.8
Q ss_pred HHHHHHHhcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCC---CcchHHHHHHHHHHHhcCCCcceeEEeeeec
Q 039533 618 YQDLYNATSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQH---HGASRSFIAECKALKSIRHRNLVKVLTACLG 694 (949)
Q Consensus 618 ~~~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~ 694 (949)
+.++....++|.+.++||+|+||.||+|++..+++.||+|+++... ....+.+.+|+.+++.++||||+++++++.+
T Consensus 61 ~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~ 140 (410)
T 3v8s_A 61 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQD 140 (410)
T ss_dssp HHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEEC
T ss_pred HHhcccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEE
Confidence 3455566789999999999999999999999899999999996421 2233568899999999999999999999765
Q ss_pred ccccCCccceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeee
Q 039533 695 ADYRGNDFKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLL 774 (949)
Q Consensus 695 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll 774 (949)
.+ ..++||||+++|+|.+++. ...+++..+..++.|++.||+|||++ +|+||||||+||++
T Consensus 141 ~~-----~~~lV~E~~~gg~L~~~l~-----------~~~~~e~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl 201 (410)
T 3v8s_A 141 DR-----YLYMVMEYMPGGDLVNLMS-----------NYDVPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLL 201 (410)
T ss_dssp SS-----EEEEEECCCTTEEHHHHHH-----------HCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEE
T ss_pred CC-----EEEEEEeCCCCCcHHHHHH-----------cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeeE
Confidence 44 7899999999999999986 23488999999999999999999987 99999999999999
Q ss_pred cCCCceEEeecccceecCCCCCccccccccCccCccCccccCCCc----cCCccchHHHHHHHHHHHhCCCCCccccccC
Q 039533 775 DDYMTARVGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCE----VSTNGDVYSYGILLLELVIGKKPIDIMFEGD 850 (949)
Q Consensus 775 ~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~----~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~ 850 (949)
+.++++||+|||+|+........ ......||+.|+|||++.+.. ++.++|||||||++|||++|+.||.......
T Consensus 202 ~~~g~ikL~DFG~a~~~~~~~~~-~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~ 280 (410)
T 3v8s_A 202 DKSGHLKLADFGTCMKMNKEGMV-RCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVG 280 (410)
T ss_dssp CTTSCEEECCCTTCEECCTTSEE-ECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHHH
T ss_pred CCCCCEEEeccceeEeeccCCcc-cccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChhh
Confidence 99999999999999876554322 122456999999999987655 8899999999999999999999996321110
Q ss_pred chhhhhccccCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCC--CCCHHHHHHH
Q 039533 851 INLHNFGRKALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQD--RTNMTNVVHE 927 (949)
Q Consensus 851 ~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~--RPs~~ev~~~ 927 (949)
.+ ..++... ....++.....+..+.+++.+|++.+|++ ||+++||++.
T Consensus 281 -~~------------~~i~~~~----------------~~~~~p~~~~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~H 330 (410)
T 3v8s_A 281 -TY------------SKIMNHK----------------NSLTFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRH 330 (410)
T ss_dssp -HH------------HHHHTHH----------------HHCCCCTTCCCCHHHHHHHHHHSSCGGGCTTSSCHHHHHTS
T ss_pred -HH------------HHHHhcc----------------ccccCCCcccccHHHHHHHHHHccChhhhCCCCCHHHHhcC
Confidence 00 0000000 00000000122456789999999999998 9999999863
No 103
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00 E-value=5.1e-39 Score=369.70 Aligned_cols=254 Identities=26% Similarity=0.363 Sum_probs=204.9
Q ss_pred hcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCCcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCccce
Q 039533 625 TSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFKA 704 (949)
Q Consensus 625 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 704 (949)
.++|++.+.||+|+||.||+|.+. ++.||||+++... ..+.+.+|++++++++||||+++++++...+ ...+
T Consensus 192 ~~~~~~~~~lG~G~fg~V~~~~~~--~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~----~~~~ 263 (450)
T 1k9a_A 192 MKELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEK----GGLY 263 (450)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEET--TEEEEEEEESSCT--TSHHHHHHHHHHHTCCCTTBCCEEEEEECTT----SCEE
T ss_pred hHHeEEEeeecCcCCeeEEEEEec--CCeEEEEEeCCch--HHHHHHHHHHHHHhccCCCEEEEEEEEEcCC----CceE
Confidence 456888899999999999999986 7899999997543 4578999999999999999999999975432 3689
Q ss_pred eEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEee
Q 039533 705 SVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVGD 784 (949)
Q Consensus 705 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~D 784 (949)
+||||+++|+|.+++... ....+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|
T Consensus 264 iv~e~~~~g~L~~~l~~~--------~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~D 332 (450)
T 1k9a_A 264 IVTEYMAKGSLVDYLRSR--------GRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSD 332 (450)
T ss_dssp EEEECCTTCBHHHHHHHH--------CTTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTSCEEECC
T ss_pred EEEEecCCCcHHHHHHhc--------CCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEECCCCCEEEee
Confidence 999999999999999721 123478999999999999999999988 899999999999999999999999
Q ss_pred cccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHh-CCCCCccccccCchhhhhccccCCC
Q 039533 785 FGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVI-GKKPIDIMFEGDINLHNFGRKALPD 863 (949)
Q Consensus 785 fG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~ 863 (949)
||+++....... ...++..|+|||++.+..++.++|||||||++|||+| |+.||......+ .
T Consensus 333 fG~a~~~~~~~~-----~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~--~---------- 395 (450)
T 1k9a_A 333 FGLTKEASSTQD-----TGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD--V---------- 395 (450)
T ss_dssp CTTCEECC-----------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTT--H----------
T ss_pred CCCccccccccc-----CCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHH--H----------
Confidence 999986543221 2247889999999999999999999999999999998 999996432211 0
Q ss_pred chhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHHhHHh
Q 039533 864 DVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHELQSIKNI 934 (949)
Q Consensus 864 ~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~~~ 934 (949)
...+...... +.+..++..+.+++.+||+.||++|||+.|+++.|+++...
T Consensus 396 --~~~i~~~~~~------------------~~p~~~~~~l~~li~~cl~~dp~~Rpt~~~l~~~L~~i~~~ 446 (450)
T 1k9a_A 396 --VPRVEKGYKM------------------DAPDGCPPAVYDVMKNCWHLDAATRPTFLQLREQLEHIRTH 446 (450)
T ss_dssp --HHHHHTTCCC------------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred --HHHHHcCCCC------------------CCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHh
Confidence 0111000000 00113456788999999999999999999999999998764
No 104
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00 E-value=2.7e-39 Score=354.68 Aligned_cols=276 Identities=24% Similarity=0.400 Sum_probs=201.6
Q ss_pred HHhcCCCCCCeeeeecCceEEEEEEcC---CCEEEEEEEEecCCC--cchHHHHHHHHHHHhcCCCcceeEEeeeecccc
Q 039533 623 NATSGFSSANLVGVGSFGSVYKGIIDE---GRTTIAVKVFNLQHH--GASRSFIAECKALKSIRHRNLVKVLTACLGADY 697 (949)
Q Consensus 623 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~---~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 697 (949)
...++|.+.+.||+|+||.||+|.+.. +++.||+|+++.... ...+.+.+|+.++++++||||+++++++...+.
T Consensus 31 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~ 110 (313)
T 3brb_A 31 IDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSS 110 (313)
T ss_dssp CCGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC---
T ss_pred cCHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeeccc
Confidence 345678888999999999999998864 456899999875432 234678999999999999999999999876553
Q ss_pred cCCccceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCC
Q 039533 698 RGNDFKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDY 777 (949)
Q Consensus 698 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~ 777 (949)
.+....++||||+++++|.+++..... ......+++..++.++.|++.||.|||++ +|+||||||+||+++.+
T Consensus 111 ~~~~~~~~v~e~~~~~~L~~~l~~~~~----~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~ 183 (313)
T 3brb_A 111 QGIPKPMVILPFMKYGDLHTYLLYSRL----ETGPKHIPLQTLLKFMVDIALGMEYLSNR---NFLHRDLAARNCMLRDD 183 (313)
T ss_dssp ----CEEEEEECCTTCBHHHHHHHTTB----TTSCCCCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCSGGGEEECTT
T ss_pred cCCcccEEEEecccCCCHHHHHHHhhh----hcCCccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCC
Confidence 334456999999999999999842111 12345689999999999999999999977 99999999999999999
Q ss_pred CceEEeecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHh-CCCCCccccccCchhhhh
Q 039533 778 MTARVGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVI-GKKPIDIMFEGDINLHNF 856 (949)
Q Consensus 778 ~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~ellt-g~~Pf~~~~~~~~~~~~~ 856 (949)
+.+||+|||+++...............+++.|+|||++.+..++.++||||||+++|||++ |..||....... ...
T Consensus 184 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~--~~~- 260 (313)
T 3brb_A 184 MTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHE--MYD- 260 (313)
T ss_dssp SCEEECSCSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG--HHH-
T ss_pred CcEEEeecCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHHH--HHH-
Confidence 9999999999987654433222223457889999999999899999999999999999999 889986432111 000
Q ss_pred ccccCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHHhHHhhc
Q 039533 857 GRKALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHELQSIKNILL 936 (949)
Q Consensus 857 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~~~~~ 936 (949)
.+........+ ..++..+.+++.+|++.||++|||+.|+++.|+++.+.+.
T Consensus 261 ----------~~~~~~~~~~~-------------------~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~~~lp 311 (313)
T 3brb_A 261 ----------YLLHGHRLKQP-------------------EDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLESLP 311 (313)
T ss_dssp ----------HHHTTCCCCCB-------------------TTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHC-
T ss_pred ----------HHHcCCCCCCC-------------------ccccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcC
Confidence 00000000000 1234568899999999999999999999999999988764
Q ss_pred c
Q 039533 937 G 937 (949)
Q Consensus 937 ~ 937 (949)
+
T Consensus 312 ~ 312 (313)
T 3brb_A 312 D 312 (313)
T ss_dssp -
T ss_pred C
Confidence 3
No 105
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=2.3e-38 Score=368.77 Aligned_cols=241 Identities=21% Similarity=0.199 Sum_probs=152.9
Q ss_pred CCCCCCCCCcccEEEeecceecccCCCcccccCCCCEEecCCcccccccCcccccccccceeecccccccccCCCCCCCC
Q 039533 310 IPAGIGNFVNLQRLDMWNNQLSGTIPPAIGELQNLKILGLNRNKLSGNIPPSIGNLKMLLNLFLNDNFLEVSIPSSLGQC 389 (949)
Q Consensus 310 ~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l 389 (949)
.+..|..+++|++|+|++|.+++..|..|.++++|+.|+|++|++++..+..|.++++|+.|+|++|.+.+..+..|..+
T Consensus 120 ~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l 199 (477)
T 2id5_A 120 LDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRL 199 (477)
T ss_dssp CTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCHHHHTTCTTCCEEEEESCCCCEECTTCSCSC
T ss_pred ChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCcccChhHhcccCCCcEEeCCCCcCcEeChhhcccC
Confidence 33344444455555555555544444455555555555555555554433445555555555555555555555555566
Q ss_pred CCCcEEEeeCccccCCCCCcccCCcccceeeccCCCccCCCCccccccccccceeeeccccccccCCcccccccchhhcc
Q 039533 390 ESLIEINLSNNNLSGTIPPQFFSLSSLSISLDWSRNKLTGSLPIEVGKLKILEFLYVYENRLEGEIPSTFGNCIRLEQLG 469 (949)
Q Consensus 390 ~~L~~L~l~~N~l~~~~p~~~~~l~~l~~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 469 (949)
++|++|++++|++.+.+|...+...+| +.|++++|++++..+..+..+++|+.|+|++|++++..+..|..+++|+.|+
T Consensus 200 ~~L~~L~l~~~~~~~~~~~~~~~~~~L-~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 278 (477)
T 2id5_A 200 YRLKVLEISHWPYLDTMTPNCLYGLNL-TSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQ 278 (477)
T ss_dssp TTCCEEEEECCTTCCEECTTTTTTCCC-SEEEEESSCCCSCCHHHHTTCTTCCEEECCSSCCCEECTTSCTTCTTCCEEE
T ss_pred cccceeeCCCCccccccCcccccCccc-cEEECcCCcccccCHHHhcCccccCeeECCCCcCCccChhhccccccCCEEE
Confidence 666666666665555555555555555 5666666666644445677777888888888888777777788888888888
Q ss_pred cCccccccccCCCcCCCCCCCEEECCCCcCCCcCcccccCCc-cceEeCCCCcCcCcccccccccccccccccCCCCCCC
Q 039533 470 MGGNLFQGPISSSLGSLRGLRVLDLSQNNLSGEIPKFLAGLS-LNNLNLSYNDLEGMVTTEGVFKNASATRILGNSKLCG 548 (949)
Q Consensus 470 l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~-L~~l~ls~N~l~~~~~~~~~~~~~~~~~~~gn~~~c~ 548 (949)
|++|++++..|..|..+++|+.|+|++|+|++..+..+..++ |+.|+|++|++.+..+....+.......+.++...|.
T Consensus 279 L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~c~c~~~~~~~~~~~~~~~~~~~~C~ 358 (477)
T 2id5_A 279 LVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGNLETLILDSNPLACDCRLLWVFRRRWRLNFNRQQPTCA 358 (477)
T ss_dssp CCSSCCSEECTTTBTTCTTCCEEECCSSCCSCCCGGGBSCGGGCCEEECCSSCEECSGGGHHHHTTTTSSCCTTCCCBEE
T ss_pred CCCCccceECHHHhcCcccCCEEECCCCcCceeCHhHcCCCcccCEEEccCCCccCccchHhHHhhhhccccCccCceeC
Confidence 888888877788888888888888888888877776766665 8888888888877654433333334455666666675
Q ss_pred CCC
Q 039533 549 GIS 551 (949)
Q Consensus 549 ~~~ 551 (949)
.|.
T Consensus 359 ~p~ 361 (477)
T 2id5_A 359 TPE 361 (477)
T ss_dssp ESG
T ss_pred Cch
Confidence 543
No 106
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00 E-value=5.2e-39 Score=350.95 Aligned_cols=260 Identities=27% Similarity=0.384 Sum_probs=200.2
Q ss_pred cCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCCcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCcccee
Q 039533 626 SGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFKAS 705 (949)
Q Consensus 626 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 705 (949)
++|++.+.||+|+||.||+|++. ++.||||++... ...+.+.+|++++++++||||+++++++.+ ..++
T Consensus 8 ~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~--~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-------~~~l 76 (307)
T 2eva_A 8 KEIEVEEVVGRGAFGVVCKAKWR--AKDVAIKQIESE--SERKAFIVELRQLSRVNHPNIVKLYGACLN-------PVCL 76 (307)
T ss_dssp GGEEEEEEEECCSSSEEEEEEET--TEEEEEEECSST--THHHHHHHHHHHHHHCCCTTBCCEEEBCTT-------TTEE
T ss_pred hHeeeeeEeecCCCceEEEEEEC--CeeEEEEEecCh--hHHHHHHHHHHHHhcCCCCCcCeEEEEEcC-------CcEE
Confidence 56888999999999999999986 789999998533 345789999999999999999999998642 4799
Q ss_pred EeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCc-eEEee
Q 039533 706 VYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMT-ARVGD 784 (949)
Q Consensus 706 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~-~kl~D 784 (949)
||||+++|+|.+++.... ....+++..++.++.|+++||+|||+.+..+|+||||||+||+++.++. +||+|
T Consensus 77 v~e~~~~~~L~~~l~~~~-------~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~D 149 (307)
T 2eva_A 77 VMEYAEGGSLYNVLHGAE-------PLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICD 149 (307)
T ss_dssp EEECCTTCBHHHHHHCSS-------SEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECC
T ss_pred EEEcCCCCCHHHHHhccC-------CCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEcc
Confidence 999999999999997321 1234788999999999999999999842248999999999999998886 79999
Q ss_pred cccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhccccCCCc
Q 039533 785 FGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKALPDD 864 (949)
Q Consensus 785 fG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~ 864 (949)
||.+........ ...||+.|+|||++.+..++.++||||||+++|||++|+.||+..............
T Consensus 150 fg~~~~~~~~~~-----~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~------ 218 (307)
T 2eva_A 150 FGTACDIQTHMT-----NNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVH------ 218 (307)
T ss_dssp CCC-----------------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHHHHHHHHH------
T ss_pred cccccccccccc-----cCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHHHHHHHHh------
Confidence 999976543221 235899999999999999999999999999999999999999643221111100000
Q ss_pred hhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHHhHHhhccC
Q 039533 865 VMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHELQSIKNILLGV 938 (949)
Q Consensus 865 ~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~~~~~~~ 938 (949)
....... ...++..+.+++.+|++.||++|||++|+++.|+++.......
T Consensus 219 -----~~~~~~~-------------------~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~~~ 268 (307)
T 2eva_A 219 -----NGTRPPL-------------------IKNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMRYFPGA 268 (307)
T ss_dssp -----TTCCCCC-------------------BTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHGGGCCCT
T ss_pred -----cCCCCCc-------------------ccccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhccCC
Confidence 0000000 0123456789999999999999999999999999998876554
No 107
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=100.00 E-value=2.3e-38 Score=367.07 Aligned_cols=349 Identities=28% Similarity=0.388 Sum_probs=291.6
Q ss_pred cCcccCcEEeeccccccCcCCCCCCCCccceeecCCCccccccccccccCCCCCcEEECCCCCCCCCCCCCcCCCCCccE
Q 039533 110 GGLRRLKVLALNNNSICGEIPTNISRCSTLIPIHPQNNQLVGKILSRFSSLSKTEILNLGSNHLTGSIPSSLGNLSSIHT 189 (949)
Q Consensus 110 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 189 (949)
..+++|+.|++++|.+. .+|. +..+++|++|++++|.+++..+ |..+++|++|+|++|.+++..| ++++++|++
T Consensus 43 ~~l~~l~~L~l~~~~i~-~l~~-~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~ 116 (466)
T 1o6v_A 43 TDLDQVTTLQADRLGIK-SIDG-VEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTG 116 (466)
T ss_dssp HHHHTCCEEECCSSCCC-CCTT-GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--GTTCTTCCE
T ss_pred hHhccccEEecCCCCCc-cCcc-hhhhcCCCEEECCCCccCCchh--hhccccCCEEECCCCccccChh--hcCCCCCCE
Confidence 45789999999999998 5664 8889999999999999887765 8889999999999999986555 888899999
Q ss_pred EeccccccCCCCCCcccCCCccccccccCcccccccccccCCCCChhhhccccccccccCCCCCCCCCCcchhccccccC
Q 039533 190 ISLAYNNLDGTIPNSFGWFENLVFLSLAANNLSVVENKLTGEVPSLEKLQRLQHFTITSNSLGSGGNDDLSFLCSLTNAT 269 (949)
Q Consensus 190 L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~l~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~~~ 269 (949)
|+|++|++++..+ +..+++|++|++++|.++.++ . +..++
T Consensus 117 L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~--------~------------------------------~~~l~ 156 (466)
T 1o6v_A 117 LTLFNNQITDIDP--LKNLTNLNRLELSSNTISDIS--------A------------------------------LSGLT 156 (466)
T ss_dssp EECCSSCCCCCGG--GTTCTTCSEEEEEEEEECCCG--------G------------------------------GTTCT
T ss_pred EECCCCCCCCChH--HcCCCCCCEEECCCCccCCCh--------h------------------------------hccCC
Confidence 9999998885533 888888888888888765432 2 33345
Q ss_pred cccEEEccCCCCCccCCchhhcccccccEEEccCccccCCCCCCCCCCCcccEEEeecceecccCCCcccccCCCCEEec
Q 039533 270 RLTWMHINSNNFGGLLPGCISNLSKTIKTLFLNNNKIYGSIPAGIGNFVNLQRLDMWNNQLSGTIPPAIGELQNLKILGL 349 (949)
Q Consensus 270 ~L~~L~L~~N~l~~~~p~~~~~l~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 349 (949)
+|+.|+++ |.+.+..+ +..+ ++|++|++++|++++. ..+..+++|++|++++|.+++..| ++.+++|+.|++
T Consensus 157 ~L~~L~l~-~~~~~~~~--~~~l-~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l 228 (466)
T 1o6v_A 157 SLQQLSFG-NQVTDLKP--LANL-TTLERLDISSNKVSDI--SVLAKLTNLESLIATNNQISDITP--LGILTNLDELSL 228 (466)
T ss_dssp TCSEEEEE-ESCCCCGG--GTTC-TTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GGGCTTCCEEEC
T ss_pred cccEeecC-CcccCchh--hccC-CCCCEEECcCCcCCCC--hhhccCCCCCEEEecCCccccccc--ccccCCCCEEEC
Confidence 55566664 34443322 5555 4699999999999854 348899999999999999997666 788999999999
Q ss_pred CCcccccccCcccccccccceeecccccccccCCCCCCCCCCCcEEEeeCccccCCCCCcccCCcccceeeccCCCccCC
Q 039533 350 NRNKLSGNIPPSIGNLKMLLNLFLNDNFLEVSIPSSLGQCESLIEINLSNNNLSGTIPPQFFSLSSLSISLDWSRNKLTG 429 (949)
Q Consensus 350 s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~l~~~L~ls~N~l~~ 429 (949)
++|++++. +.+..+++|+.|++++|.+++..| +..+++|++|++++|++++..| +..+++| +.|++++|++++
T Consensus 229 ~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L-~~L~L~~n~l~~ 301 (466)
T 1o6v_A 229 NGNQLKDI--GTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTAL-TNLELNENQLED 301 (466)
T ss_dssp CSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCCCGG--GTTCTTC-SEEECCSSCCSC
T ss_pred CCCCcccc--hhhhcCCCCCEEECCCCccccchh--hhcCCCCCEEECCCCccCcccc--ccCCCcc-CeEEcCCCcccC
Confidence 99999854 468999999999999999997665 8899999999999999996444 8888999 899999999997
Q ss_pred CCccccccccccceeeeccccccccCCcccccccchhhcccCccccccccCCCcCCCCCCCEEECCCCcCCCcCcccccC
Q 039533 430 SLPIEVGKLKILEFLYVYENRLEGEIPSTFGNCIRLEQLGMGGNLFQGPISSSLGSLRGLRVLDLSQNNLSGEIPKFLAG 509 (949)
Q Consensus 430 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 509 (949)
..| +..+++|+.|+|++|++++..| ++.+++|+.|++++|++++. ..+..+++|+.|++++|++++.+| +..
T Consensus 302 ~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~ 373 (466)
T 1o6v_A 302 ISP--ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFYNNKVSDV--SSLANLTNINWLSAGHNQISDLTP--LAN 373 (466)
T ss_dssp CGG--GGGCTTCSEEECCSSCCSCCGG--GGGCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCBCGG--GTT
T ss_pred chh--hcCCCCCCEEECcCCcCCCchh--hccCccCCEeECCCCccCCc--hhhccCCCCCEEeCCCCccCccch--hhc
Confidence 655 8899999999999999997766 88999999999999999976 579999999999999999998888 555
Q ss_pred Cc-cceEeCCCCcCcCccc
Q 039533 510 LS-LNNLNLSYNDLEGMVT 527 (949)
Q Consensus 510 ~~-L~~l~ls~N~l~~~~~ 527 (949)
++ |+.|++++|++++.+.
T Consensus 374 l~~L~~L~l~~n~~~~~p~ 392 (466)
T 1o6v_A 374 LTRITQLGLNDQAWTNAPV 392 (466)
T ss_dssp CTTCCEEECCCEEEECCCB
T ss_pred CCCCCEEeccCCcccCCch
Confidence 55 9999999999999643
No 108
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.1e-39 Score=360.55 Aligned_cols=275 Identities=23% Similarity=0.314 Sum_probs=207.9
Q ss_pred HhcCCCCCCeeeeecCceEEEEEEc-----CCCEEEEEEEEecCC-CcchHHHHHHHHHHHhc-CCCcceeEEeeeeccc
Q 039533 624 ATSGFSSANLVGVGSFGSVYKGIID-----EGRTTIAVKVFNLQH-HGASRSFIAECKALKSI-RHRNLVKVLTACLGAD 696 (949)
Q Consensus 624 ~~~~y~~~~~lg~G~~g~Vy~~~~~-----~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~ 696 (949)
..++|.+.+.||+|+||.||+|++. .+++.||||+++... ....+.+.+|+.+++++ +||||+++++++...+
T Consensus 43 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~ 122 (344)
T 1rjb_A 43 PRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSG 122 (344)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred CHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeCC
Confidence 3468899999999999999999972 356789999997442 23457899999999999 8999999999976544
Q ss_pred ccCCccceeEeeeccCCChhhhcCCCCCCC-------------ccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeE
Q 039533 697 YRGNDFKASVYEFMHYGSLEEWLHPFTGED-------------EIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTA 763 (949)
Q Consensus 697 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~-------------~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~iv 763 (949)
..++||||+++|+|.+++....... ........+++..++.++.|++.||+|||++ +|+
T Consensus 123 -----~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~iv 194 (344)
T 1rjb_A 123 -----PIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFK---SCV 194 (344)
T ss_dssp -----SCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHT---TEE
T ss_pred -----ccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhC---Ccc
Confidence 7899999999999999997432110 0001124589999999999999999999987 999
Q ss_pred ecCCCCCCeeecCCCceEEeecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHh-CCCC
Q 039533 764 HCDLKPSNVLLDDYMTARVGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVI-GKKP 842 (949)
Q Consensus 764 HrDlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~ellt-g~~P 842 (949)
||||||+||+++.++.+||+|||+++...............||+.|+|||++.+..++.++|||||||++|||+| |..|
T Consensus 195 H~Dikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p 274 (344)
T 1rjb_A 195 HRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNP 274 (344)
T ss_dssp ETTCSGGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCS
T ss_pred cCCCChhhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCC
Confidence 999999999999999999999999987655443333334457889999999988889999999999999999998 9999
Q ss_pred CccccccCchhhhhccccCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHH
Q 039533 843 IDIMFEGDINLHNFGRKALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMT 922 (949)
Q Consensus 843 f~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ 922 (949)
|....... .. ...+........ ...++..+.+++.+||+.||++|||+.
T Consensus 275 ~~~~~~~~-~~------------~~~~~~~~~~~~------------------~~~~~~~l~~li~~~l~~dp~~Rps~~ 323 (344)
T 1rjb_A 275 YPGIPVDA-NF------------YKLIQNGFKMDQ------------------PFYATEEIYIIMQSCWAFDSRKRPSFP 323 (344)
T ss_dssp STTCCCSH-HH------------HHHHHTTCCCCC------------------CTTCCHHHHHHHHHHTCSSGGGSCCHH
T ss_pred cccCCcHH-HH------------HHHHhcCCCCCC------------------CCCCCHHHHHHHHHHcCCCchhCcCHH
Confidence 96432111 11 111111111000 012245688999999999999999999
Q ss_pred HHHHHHHHhHHhhcc
Q 039533 923 NVVHELQSIKNILLG 937 (949)
Q Consensus 923 ev~~~L~~i~~~~~~ 937 (949)
|+++.|+.+.+...+
T Consensus 324 ~l~~~l~~~~~~~~~ 338 (344)
T 1rjb_A 324 NLTSFLGCQLADAEE 338 (344)
T ss_dssp HHHHHHHHHC-----
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999998766543
No 109
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00 E-value=9.4e-40 Score=360.05 Aligned_cols=259 Identities=24% Similarity=0.359 Sum_probs=202.9
Q ss_pred cCCCCCCeeeeecCceEEEEEEcCCCEE----EEEEEEecCC-CcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCC
Q 039533 626 SGFSSANLVGVGSFGSVYKGIIDEGRTT----IAVKVFNLQH-HGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGN 700 (949)
Q Consensus 626 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~----vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 700 (949)
++|++.+.||+|+||.||+|++..+++. ||+|++.... ....+.+.+|+.++++++||||+++++++..
T Consensus 13 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~------ 86 (325)
T 3kex_A 13 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCPG------ 86 (325)
T ss_dssp TTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEECB------
T ss_pred hHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcC------
Confidence 5788899999999999999999766654 7788775332 2334567889999999999999999998742
Q ss_pred ccceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCce
Q 039533 701 DFKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTA 780 (949)
Q Consensus 701 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~ 780 (949)
...++||||+++|+|.+++.. ....+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+
T Consensus 87 ~~~~~v~e~~~~~~L~~~l~~---------~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~ 154 (325)
T 3kex_A 87 SSLQLVTQYLPLGSLLDHVRQ---------HRGALGPQLLLNWGVQIAKGMYYLEEH---GMVHRNLAARNVLLKSPSQV 154 (325)
T ss_dssp SSEEEEEECCTTCBSHHHHHS---------SGGGSCTTHHHHHHHHHHHHHHHHHHT---TCCCSCCSSTTEEESSSSCE
T ss_pred CccEEEEEeCCCCCHHHHHHH---------ccccCCHHHHHHHHHHHHHHHHHHHhC---CCCCCccchheEEECCCCeE
Confidence 257899999999999999962 234588889999999999999999988 89999999999999999999
Q ss_pred EEeecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHh-CCCCCccccccCchhhhhccc
Q 039533 781 RVGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVI-GKKPIDIMFEGDINLHNFGRK 859 (949)
Q Consensus 781 kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~ellt-g~~Pf~~~~~~~~~~~~~~~~ 859 (949)
||+|||+++...............||..|+|||++.+..++.++|||||||++|||+| |+.||....... ..
T Consensus 155 kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~--~~----- 227 (325)
T 3kex_A 155 QVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAE--VP----- 227 (325)
T ss_dssp EECSCSGGGGSCCCTTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTTH--HH-----
T ss_pred EECCCCcccccCcccccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHHH--HH-----
Confidence 9999999998765544333334568889999999998899999999999999999999 999996432111 11
Q ss_pred cCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHHhHHh
Q 039533 860 ALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHELQSIKNI 934 (949)
Q Consensus 860 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~~~ 934 (949)
+.+........ ...++..+.+++.+||+.||++|||++|+++.|+++...
T Consensus 228 -------~~~~~~~~~~~------------------~~~~~~~~~~li~~~l~~dp~~Rps~~el~~~l~~~~~~ 277 (325)
T 3kex_A 228 -------DLLEKGERLAQ------------------PQICTIDVYMVMVKCWMIDENIRPTFKELANEFTRMARD 277 (325)
T ss_dssp -------HHHHTTCBCCC------------------CTTBCTTTTHHHHHHTCSCTTTSCCHHHHHHHHHHHTTS
T ss_pred -------HHHHcCCCCCC------------------CCcCcHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence 11110000000 001223467899999999999999999999999998654
No 110
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00 E-value=2.6e-39 Score=346.89 Aligned_cols=254 Identities=27% Similarity=0.404 Sum_probs=192.5
Q ss_pred hcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCC----cchHHHHHHHHHHHhcCCCcceeEEeeeecccccCC
Q 039533 625 TSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHH----GASRSFIAECKALKSIRHRNLVKVLTACLGADYRGN 700 (949)
Q Consensus 625 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~----~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 700 (949)
.++|++.+.||+|+||.||+|.+. ++.||||+++.... ...+.+.+|++++++++||||+++++++...+
T Consensus 6 ~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~---- 79 (271)
T 3dtc_A 6 FAELTLEEIIGIGGFGKVYRAFWI--GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEP---- 79 (271)
T ss_dssp TTSEEEEEEEEEETTEEEEEEEET--TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC-----
T ss_pred hhheeeeeeeccCCCeEEEEEEEc--CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCC----
Confidence 467889999999999999999986 78999999864432 22467899999999999999999999976544
Q ss_pred ccceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecC----
Q 039533 701 DFKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDD---- 776 (949)
Q Consensus 701 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~---- 776 (949)
..++||||+++++|.+++. ...+++..+..++.|++.||+|||++...+|+||||||+||+++.
T Consensus 80 -~~~lv~e~~~~~~L~~~~~-----------~~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~ 147 (271)
T 3dtc_A 80 -NLCLVMEFARGGPLNRVLS-----------GKRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVEN 147 (271)
T ss_dssp --CEEEEECCTTEEHHHHHT-----------SSCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSS
T ss_pred -ceEEEEEcCCCCCHHHHhh-----------cCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEeccccc
Confidence 7899999999999999985 245899999999999999999999882223999999999999986
Q ss_pred ----CCceEEeecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccccccCch
Q 039533 777 ----YMTARVGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDIN 852 (949)
Q Consensus 777 ----~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~ 852 (949)
++.+||+|||.++........ ...||+.|+|||++.+..++.++||||||+++|||++|+.||.........
T Consensus 148 ~~~~~~~~kl~Dfg~~~~~~~~~~~----~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~ 223 (271)
T 3dtc_A 148 GDLSNKILKITDFGLAREWHRTTKM----SAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVA 223 (271)
T ss_dssp SCCSSCCEEECCCCC-----------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHHHHH
T ss_pred ccccCcceEEccCCccccccccccc----CCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH
Confidence 778999999999876543322 345899999999998888999999999999999999999999643211110
Q ss_pred hhhhccccCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHHh
Q 039533 853 LHNFGRKALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHELQSI 931 (949)
Q Consensus 853 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i 931 (949)
. ........... ...++..+.+++.+|++.||++|||+.|+++.|++|
T Consensus 224 ~-------------~~~~~~~~~~~------------------~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~~l 271 (271)
T 3dtc_A 224 Y-------------GVAMNKLALPI------------------PSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTTI 271 (271)
T ss_dssp H-------------HHHTSCCCCCC------------------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHC-
T ss_pred H-------------hhhcCCCCCCC------------------CcccCHHHHHHHHHHhcCCcccCcCHHHHHHHHhcC
Confidence 0 00000000000 012345688999999999999999999999999864
No 111
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00 E-value=3.7e-39 Score=352.77 Aligned_cols=246 Identities=22% Similarity=0.233 Sum_probs=201.1
Q ss_pred hcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCC---CcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCc
Q 039533 625 TSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQH---HGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGND 701 (949)
Q Consensus 625 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 701 (949)
.++|++.+.||+|+||.||+|+...+++.||+|+++... ....+.+.+|+.++++++||||+++++++.+..
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~----- 79 (318)
T 1fot_A 5 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQ----- 79 (318)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSS-----
T ss_pred hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCC-----
Confidence 467899999999999999999999899999999997432 233467889999999999999999999976544
Q ss_pred cceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceE
Q 039533 702 FKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTAR 781 (949)
Q Consensus 702 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~k 781 (949)
..++||||+++|+|.+++. ....+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+|
T Consensus 80 ~~~lv~e~~~gg~L~~~l~----------~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~k 146 (318)
T 1fot_A 80 QIFMIMDYIEGGELFSLLR----------KSQRFPNPVAKFYAAEVCLALEYLHSK---DIIYRDLKPENILLDKNGHIK 146 (318)
T ss_dssp EEEEEECCCCSCBHHHHHH----------HTSSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECTTSCEE
T ss_pred EEEEEEeCCCCCCHHHHHH----------HcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChheEEEcCCCCEE
Confidence 7899999999999999996 234589999999999999999999977 999999999999999999999
Q ss_pred EeecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhccccC
Q 039533 782 VGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKAL 861 (949)
Q Consensus 782 l~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~ 861 (949)
|+|||+++...... ....||+.|+|||++.+..++.++|||||||++|||++|+.||....... .
T Consensus 147 L~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~-----~----- 211 (318)
T 1fot_A 147 ITDFGFAKYVPDVT-----YTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMK-----T----- 211 (318)
T ss_dssp ECCCSSCEECSSCB-----CCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHH-----H-----
T ss_pred EeecCcceecCCcc-----ccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHH-----H-----
Confidence 99999998754321 23569999999999999999999999999999999999999996321110 0
Q ss_pred CCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCC-----CHHHHHH
Q 039533 862 PDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRT-----NMTNVVH 926 (949)
Q Consensus 862 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----s~~ev~~ 926 (949)
...+....... + ...+..+.+++.+|++.||++|| +++|+++
T Consensus 212 ---~~~i~~~~~~~-p-------------------~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~ 258 (318)
T 1fot_A 212 ---YEKILNAELRF-P-------------------PFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKN 258 (318)
T ss_dssp ---HHHHHHCCCCC-C-------------------TTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHT
T ss_pred ---HHHHHhCCCCC-C-------------------CCCCHHHHHHHHHHhccCHHHcCCCcCCCHHHHhc
Confidence 01111111100 0 01234578999999999999999 8888874
No 112
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00 E-value=2e-39 Score=355.67 Aligned_cols=272 Identities=24% Similarity=0.357 Sum_probs=212.2
Q ss_pred hcCCCCCCeeeeecCceEEEEEE-----cCCCEEEEEEEEecCCC-cchHHHHHHHHHHHhc-CCCcceeEEeeeecccc
Q 039533 625 TSGFSSANLVGVGSFGSVYKGII-----DEGRTTIAVKVFNLQHH-GASRSFIAECKALKSI-RHRNLVKVLTACLGADY 697 (949)
Q Consensus 625 ~~~y~~~~~lg~G~~g~Vy~~~~-----~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~ 697 (949)
.++|++.+.||+|+||.||+|++ ..+++.||||+++.... ...+.+.+|+.+++++ +||||+++++++...+
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~- 100 (313)
T 1t46_A 22 RNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGG- 100 (313)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-
T ss_pred hhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCC-
Confidence 46788999999999999999986 34678999999975443 2346789999999999 9999999999976544
Q ss_pred cCCccceeEeeeccCCChhhhcCCCCCCC--------ccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCC
Q 039533 698 RGNDFKASVYEFMHYGSLEEWLHPFTGED--------EIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKP 769 (949)
Q Consensus 698 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~--------~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp 769 (949)
..++||||+++|+|.+++....... ........+++.+++.++.|++.||+|||++ +|+||||||
T Consensus 101 ----~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp 173 (313)
T 1t46_A 101 ----PTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK---NCIHRDLAA 173 (313)
T ss_dssp ----SCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSG
T ss_pred ----CcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCcc
Confidence 7899999999999999997432110 0011233589999999999999999999987 999999999
Q ss_pred CCeeecCCCceEEeecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHh-CCCCCccccc
Q 039533 770 SNVLLDDYMTARVGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVI-GKKPIDIMFE 848 (949)
Q Consensus 770 ~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~ellt-g~~Pf~~~~~ 848 (949)
+||+++.++.+||+|||.++...............||+.|+|||++.+..++.++||||||+++|||+| |+.||.....
T Consensus 174 ~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~ 253 (313)
T 1t46_A 174 RNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPV 253 (313)
T ss_dssp GGEEEETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCS
T ss_pred ceEEEcCCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccc
Confidence 999999999999999999988765544333334457889999999988889999999999999999999 9999864322
Q ss_pred cCchhhhhccccCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHH
Q 039533 849 GDINLHNFGRKALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHEL 928 (949)
Q Consensus 849 ~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L 928 (949)
.. .. ...+........ ....+..+.+++.+|++.||++|||+.|+++.|
T Consensus 254 ~~-~~------------~~~~~~~~~~~~------------------~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L 302 (313)
T 1t46_A 254 DS-KF------------YKMIKEGFRMLS------------------PEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLI 302 (313)
T ss_dssp SH-HH------------HHHHHHTCCCCC------------------CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred hh-HH------------HHHhccCCCCCC------------------cccCCHHHHHHHHHHcCCCchhCcCHHHHHHHH
Confidence 11 01 111111100000 012345688999999999999999999999999
Q ss_pred HHhHHhh
Q 039533 929 QSIKNIL 935 (949)
Q Consensus 929 ~~i~~~~ 935 (949)
+++....
T Consensus 303 ~~~~~~~ 309 (313)
T 1t46_A 303 EKQISES 309 (313)
T ss_dssp HHHHHHT
T ss_pred HHHHHHh
Confidence 9987764
No 113
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00 E-value=1.6e-39 Score=359.16 Aligned_cols=251 Identities=22% Similarity=0.287 Sum_probs=200.6
Q ss_pred HHHhcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCC---CcchHHHHHHHHHHHhc-CCCcceeEEeeeecccc
Q 039533 622 YNATSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQH---HGASRSFIAECKALKSI-RHRNLVKVLTACLGADY 697 (949)
Q Consensus 622 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~ 697 (949)
....++|.+.+.||+|+||.||+|++..+++.||||+++... ....+.+..|..++.++ +||||+++++++...+
T Consensus 13 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~- 91 (345)
T 1xjd_A 13 KLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKE- 91 (345)
T ss_dssp ---CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSS-
T ss_pred CCChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCC-
Confidence 345678999999999999999999999899999999997532 23446788899999987 8999999999976544
Q ss_pred cCCccceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCC
Q 039533 698 RGNDFKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDY 777 (949)
Q Consensus 698 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~ 777 (949)
..++||||+++|+|.+++. ....+++.++..++.|++.||+|||++ +|+||||||+||+++.+
T Consensus 92 ----~~~lv~E~~~gg~L~~~l~----------~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~ 154 (345)
T 1xjd_A 92 ----NLFFVMEYLNGGDLMYHIQ----------SCHKFDLSRATFYAAEIILGLQFLHSK---GIVYRDLKLDNILLDKD 154 (345)
T ss_dssp ----EEEEEEECCTTCBHHHHHH----------HHSSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTT
T ss_pred ----EEEEEEeCCCCCcHHHHHH----------HcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCChhhEEECCC
Confidence 7899999999999999996 234689999999999999999999988 99999999999999999
Q ss_pred CceEEeecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhc
Q 039533 778 MTARVGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFG 857 (949)
Q Consensus 778 ~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~ 857 (949)
+++||+|||+|+........ .....||+.|+|||++.+..++.++|||||||++|||++|+.||....... ...
T Consensus 155 g~vkL~DFG~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~--~~~-- 228 (345)
T 1xjd_A 155 GHIKIADFGMCKENMLGDAK--TNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEE--LFH-- 228 (345)
T ss_dssp SCEEECCCTTCBCCCCTTCC--BCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH--HHH--
T ss_pred CCEEEeEChhhhhcccCCCc--ccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCHHH--HHH--
Confidence 99999999999865333222 224569999999999999999999999999999999999999996432110 000
Q ss_pred cccCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHH-HHH
Q 039533 858 RKALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMT-NVV 925 (949)
Q Consensus 858 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~-ev~ 925 (949)
.+..... ..+ ...+..+.+++.+|++.||++||++. |+.
T Consensus 229 ---------~i~~~~~-~~p-------------------~~~s~~~~~li~~lL~~dp~~R~~~~~~i~ 268 (345)
T 1xjd_A 229 ---------SIRMDNP-FYP-------------------RWLEKEAKDLLVKLFVREPEKRLGVRGDIR 268 (345)
T ss_dssp ---------HHHHCCC-CCC-------------------TTSCHHHHHHHHHHSCSSGGGSBTTBSCGG
T ss_pred ---------HHHhCCC-CCC-------------------cccCHHHHHHHHHHhcCCHhHcCCChHHHH
Confidence 0000000 000 01234578899999999999999997 554
No 114
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00 E-value=2.3e-39 Score=349.66 Aligned_cols=258 Identities=24% Similarity=0.371 Sum_probs=204.5
Q ss_pred hcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCCcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCccce
Q 039533 625 TSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFKA 704 (949)
Q Consensus 625 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 704 (949)
.++|++.+.||+|+||.||+|.+. ++..||+|+++.... ..+++.+|++++++++||||+++++++.... ..+
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-----~~~ 95 (283)
T 3gen_A 23 PKDLTFLKELGTGQFGVVKYGKWR-GQYDVAIKMIKEGSM-SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQR-----PIF 95 (283)
T ss_dssp GGGEEEEEECC---CEEEEEEEET-TTEEEEEEEECTTSB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSS-----SEE
T ss_pred HHHHHhHhhcCCCCCceEEEEEEc-CCCeEEEEEecCCCC-CHHHHHHHHHHHhcCCCCCEeeEEEEEecCC-----CeE
Confidence 467888999999999999999987 678899999975433 3467999999999999999999999975443 789
Q ss_pred eEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEee
Q 039533 705 SVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVGD 784 (949)
Q Consensus 705 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~D 784 (949)
+||||+++++|.+++.. ....+++.++..++.|++.||+|||++ +|+||||||+||+++.++.+||+|
T Consensus 96 lv~e~~~~~~L~~~l~~---------~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl~D 163 (283)
T 3gen_A 96 IITEYMANGCLLNYLRE---------MRHRFQTQQLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSD 163 (283)
T ss_dssp EEECCCTTCBHHHHHHC---------GGGCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTSCEEECS
T ss_pred EEEeccCCCcHHHHHHH---------hccCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCccceEEEcCCCCEEEcc
Confidence 99999999999999962 234589999999999999999999987 999999999999999999999999
Q ss_pred cccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHh-CCCCCccccccCchhhhhccccCCC
Q 039533 785 FGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVI-GKKPIDIMFEGDINLHNFGRKALPD 863 (949)
Q Consensus 785 fG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~ 863 (949)
||.++....... .......+|+.|+|||++.+..++.++||||+|+++|||+| |+.||....... ...
T Consensus 164 fg~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~~--~~~-------- 232 (283)
T 3gen_A 164 FGLSRYVLDDEY-TSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSE--TAE-------- 232 (283)
T ss_dssp TTGGGGBCCHHH-HSTTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHHH--HHH--------
T ss_pred cccccccccccc-ccccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChhH--HHH--------
Confidence 999987644322 11223447788999999998889999999999999999998 999996432111 000
Q ss_pred chhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHHhHHh
Q 039533 864 DVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHELQSIKNI 934 (949)
Q Consensus 864 ~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~~~ 934 (949)
.+........+ ...+..+.+++.+||+.||++|||++|+++.|+++.+.
T Consensus 233 ---~~~~~~~~~~~-------------------~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~~~~~ 281 (283)
T 3gen_A 233 ---HIAQGLRLYRP-------------------HLASEKVYTIMYSCWHEKADERPTFKILLSNILDVMDE 281 (283)
T ss_dssp ---HHHTTCCCCCC-------------------TTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred ---HHhcccCCCCC-------------------CcCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHhhc
Confidence 00000000000 01234678999999999999999999999999998764
No 115
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00 E-value=1.6e-39 Score=354.56 Aligned_cols=271 Identities=23% Similarity=0.320 Sum_probs=207.1
Q ss_pred cCCCCCCeeeeecCceEEEEE----EcCCCEEEEEEEEecCC-CcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCC
Q 039533 626 SGFSSANLVGVGSFGSVYKGI----IDEGRTTIAVKVFNLQH-HGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGN 700 (949)
Q Consensus 626 ~~y~~~~~lg~G~~g~Vy~~~----~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 700 (949)
.+|++.+.||+|+||.||+|+ ...+++.||||+++... ....+.+.+|++++++++||||+++++++...+ .
T Consensus 21 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~---~ 97 (302)
T 4e5w_A 21 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDG---G 97 (302)
T ss_dssp GGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC------
T ss_pred hhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCC---C
Confidence 457888999999999999999 45578999999997443 234478999999999999999999999987542 2
Q ss_pred ccceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCce
Q 039533 701 DFKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTA 780 (949)
Q Consensus 701 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~ 780 (949)
...++||||+++++|.+++.. ....+++.++..++.|++.||+|||++ +|+||||||+||+++.++.+
T Consensus 98 ~~~~lv~e~~~~~~L~~~l~~---------~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~ 165 (302)
T 4e5w_A 98 NGIKLIMEFLPSGSLKEYLPK---------NKNKINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQV 165 (302)
T ss_dssp CCEEEEEECCTTCBHHHHHHH---------HTTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEE
T ss_pred ceEEEEEEeCCCCcHHHHHHh---------ccccCCHHHHHHHHHHHHHHHHHhhcC---CcccCCCchheEEEcCCCCE
Confidence 467999999999999999952 234589999999999999999999987 99999999999999999999
Q ss_pred EEeecccceecCCCCCc-cccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhccc
Q 039533 781 RVGDFGLARILSPDHTQ-TSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRK 859 (949)
Q Consensus 781 kl~DfG~a~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~ 859 (949)
||+|||+++........ .......||..|+|||++.+..++.++||||+|+++|||++|..|+......... ....
T Consensus 166 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~---~~~~ 242 (302)
T 4e5w_A 166 KIGDFGLTKAIETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLK---MIGP 242 (302)
T ss_dssp EECCCTTCEECCTTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHH---HHCS
T ss_pred EECcccccccccCCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhh---ccCC
Confidence 99999999887655432 2222445888999999999889999999999999999999999987533211000 0000
Q ss_pred cCCC----chhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHHhH
Q 039533 860 ALPD----DVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHELQSIK 932 (949)
Q Consensus 860 ~~~~----~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~ 932 (949)
.... .....+.... +.+....++..+.+++.+||+.||++|||++|+++.|+++.
T Consensus 243 ~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ll 301 (302)
T 4e5w_A 243 THGQMTVTRLVNTLKEGK------------------RLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEALL 301 (302)
T ss_dssp CCGGGHHHHHHHHHHTTC------------------CCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred cccccCHHHHHHHHhccC------------------CCCCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHh
Confidence 0000 0000010000 00011134567899999999999999999999999999875
No 116
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00 E-value=4.6e-39 Score=351.94 Aligned_cols=270 Identities=22% Similarity=0.271 Sum_probs=199.1
Q ss_pred hcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCC--cchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCcc
Q 039533 625 TSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHH--GASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDF 702 (949)
Q Consensus 625 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 702 (949)
.++|++.+.||+|+||+||+|++. +++.||+|+++.... ...+.+.+|++++++++||||+++++++.... .
T Consensus 20 ~~~y~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-----~ 93 (311)
T 3niz_A 20 MEKYQKLEKVGEGTYGVVYKAKDS-QGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSER-----C 93 (311)
T ss_dssp SCEEEEEEEEEECSSCEEEEEEET-TSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSS-----C
T ss_pred HhhhHhhhhccCCCCeEEEEEEEC-CCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCC-----E
Confidence 478999999999999999999996 589999999974432 23467889999999999999999999975443 7
Q ss_pred ceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEE
Q 039533 703 KASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARV 782 (949)
Q Consensus 703 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl 782 (949)
.++||||+++ +|.+++.. ....+++.++..++.|++.||+|||++ +|+||||||+||+++.++.+||
T Consensus 94 ~~lv~e~~~~-~l~~~~~~---------~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIl~~~~~~~kl 160 (311)
T 3niz_A 94 LTLVFEFMEK-DLKKVLDE---------NKTGLQDSQIKIYLYQLLRGVAHCHQH---RILHRDLKPQNLLINSDGALKL 160 (311)
T ss_dssp EEEEEECCSE-EHHHHHHT---------CTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEE
T ss_pred EEEEEcCCCC-CHHHHHHh---------ccCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCchHhEEECCCCCEEE
Confidence 8999999985 88887752 234589999999999999999999987 9999999999999999999999
Q ss_pred eecccceecCCCCCccccccccCccCccCccccCC-CccCCccchHHHHHHHHHHHhCCCCCccccccCch--hhhhccc
Q 039533 783 GDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVG-CEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDIN--LHNFGRK 859 (949)
Q Consensus 783 ~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~--~~~~~~~ 859 (949)
+|||+++......... ....||+.|+|||++.+ ..++.++||||+||++|||++|+.||......+.. .......
T Consensus 161 ~Dfg~a~~~~~~~~~~--~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~ 238 (311)
T 3niz_A 161 ADFGLARAFGIPVRSY--THEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGT 238 (311)
T ss_dssp CCCTTCEETTSCCC-----CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTHHHHHHHHHCC
T ss_pred ccCcCceecCCCcccc--cCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHCC
Confidence 9999998865433222 23458999999999876 46899999999999999999999999754332211 0011111
Q ss_pred cCCCchhhh------cccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 039533 860 ALPDDVMDI------VDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVH 926 (949)
Q Consensus 860 ~~~~~~~~~------~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 926 (949)
..+...... .+....... .............++.+++.+|++.||++|||++|+++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 300 (311)
T 3niz_A 239 PNPREWPQVQELPLWKQRTFQVFE-----------KKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMN 300 (311)
T ss_dssp CCTTTSGGGTTSHHHHSCCCCCCC-----------CCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred CChHHhhhhhccchhhhccccccc-----------CCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 111111000 000000000 00000001123456789999999999999999999986
No 117
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00 E-value=2.3e-39 Score=349.23 Aligned_cols=260 Identities=22% Similarity=0.347 Sum_probs=196.1
Q ss_pred hcCCCCCCeeeeecCceEEEEEEcCC---CEEEEEEEEecCCC-cchHHHHHHHHHHHhcCCCcceeEEeeeecccccCC
Q 039533 625 TSGFSSANLVGVGSFGSVYKGIIDEG---RTTIAVKVFNLQHH-GASRSFIAECKALKSIRHRNLVKVLTACLGADYRGN 700 (949)
Q Consensus 625 ~~~y~~~~~lg~G~~g~Vy~~~~~~~---~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 700 (949)
.++|++.+.||+|+||.||+|.+..+ +..||+|+++.... ...+.+.+|+.++++++||||+++++++.+
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~------ 87 (281)
T 1mp8_A 14 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE------ 87 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECS------
T ss_pred hHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEcc------
Confidence 46788999999999999999998643 46799999865432 234678999999999999999999998632
Q ss_pred ccceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCce
Q 039533 701 DFKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTA 780 (949)
Q Consensus 701 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~ 780 (949)
+..++||||+++++|.+++.. ....+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+
T Consensus 88 ~~~~lv~e~~~~~~L~~~l~~---------~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~ 155 (281)
T 1mp8_A 88 NPVWIIMELCTLGELRSFLQV---------RKYSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCV 155 (281)
T ss_dssp SSCEEEEECCTTEEHHHHHHH---------TTTTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEE
T ss_pred CccEEEEecCCCCCHHHHHHh---------cCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecccccHHHEEECCCCCE
Confidence 257899999999999999962 234589999999999999999999987 99999999999999999999
Q ss_pred EEeecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHh-CCCCCccccccCchhhhhccc
Q 039533 781 RVGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVI-GKKPIDIMFEGDINLHNFGRK 859 (949)
Q Consensus 781 kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~ellt-g~~Pf~~~~~~~~~~~~~~~~ 859 (949)
||+|||+++......... .....+|+.|+|||++.+..++.++||||||+++|||++ |..||......+ ...
T Consensus 156 kl~Dfg~~~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~--~~~---- 228 (281)
T 1mp8_A 156 KLGDFGLSRYMEDSTYYK-ASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND--VIG---- 228 (281)
T ss_dssp EECC--------------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG--HHH----
T ss_pred EECccccccccCcccccc-cccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHHH--HHH----
Confidence 999999998765433221 123347789999999988889999999999999999997 999996432211 000
Q ss_pred cCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHHhHHhh
Q 039533 860 ALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHELQSIKNIL 935 (949)
Q Consensus 860 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~~~~ 935 (949)
.+......+.+ ..++..+.+++.+|++.||++|||+.|+++.|+++.+..
T Consensus 229 -------~i~~~~~~~~~-------------------~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~ 278 (281)
T 1mp8_A 229 -------RIENGERLPMP-------------------PNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEE 278 (281)
T ss_dssp -------HHHTTCCCCCC-------------------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred -------HHHcCCCCCCC-------------------CCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHh
Confidence 00000000000 123456889999999999999999999999999987653
No 118
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00 E-value=3.9e-39 Score=358.09 Aligned_cols=252 Identities=21% Similarity=0.253 Sum_probs=187.5
Q ss_pred HhcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCCcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCccc
Q 039533 624 ATSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFK 703 (949)
Q Consensus 624 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 703 (949)
..++|.+.+.||+|+||.||+|++..+++.||||+++... ..+.+.+|++++++++||||+++++++...+ ..
T Consensus 51 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~-----~~ 123 (349)
T 2w4o_A 51 LSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV--DKKIVRTEIGVLLRLSHPNIIKLKEIFETPT-----EI 123 (349)
T ss_dssp GGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC------------CHHHHHCCCTTBCCEEEEEECSS-----EE
T ss_pred ccCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch--hHHHHHHHHHHHHhCCCCCCcceeeeEecCC-----eE
Confidence 3567999999999999999999999889999999997543 3456889999999999999999999986544 78
Q ss_pred eeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecC---CCce
Q 039533 704 ASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDD---YMTA 780 (949)
Q Consensus 704 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~---~~~~ 780 (949)
++||||+++++|.+++. ....+++.++..++.|++.||+|||+. +|+||||||+||+++. ++.+
T Consensus 124 ~lv~e~~~~~~L~~~l~----------~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dikp~NIll~~~~~~~~~ 190 (349)
T 2w4o_A 124 SLVLELVTGGELFDRIV----------EKGYYSERDAADAVKQILEAVAYLHEN---GIVHRDLKPENLLYATPAPDAPL 190 (349)
T ss_dssp EEEECCCCSCBHHHHHT----------TCSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESSSSTTCCE
T ss_pred EEEEEeCCCCCHHHHHH----------hcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCcccEEEecCCCCCCE
Confidence 99999999999999996 234589999999999999999999987 8999999999999975 8899
Q ss_pred EEeecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhcccc
Q 039533 781 RVGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKA 860 (949)
Q Consensus 781 kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~ 860 (949)
||+|||+++........ ....||+.|+|||++.+..++.++|||||||++|||++|+.||.............
T Consensus 191 kl~Dfg~a~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~i---- 263 (349)
T 2w4o_A 191 KIADFGLSKIVEHQVLM---KTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRI---- 263 (349)
T ss_dssp EECCCC-------------------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHHHHHHHH----
T ss_pred EEccCccccccCccccc---ccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccHHHHHHH----
Confidence 99999999876543221 23458999999999999899999999999999999999999996432211111111
Q ss_pred CCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 039533 861 LPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVH 926 (949)
Q Consensus 861 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 926 (949)
......... +...+.+..+.+++.+|++.||++|||+.|+++
T Consensus 264 --------~~~~~~~~~----------------~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 305 (349)
T 2w4o_A 264 --------LNCEYYFIS----------------PWWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQ 305 (349)
T ss_dssp --------HTTCCCCCT----------------TTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred --------HhCCCccCC----------------chhhhCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 000000000 000123456789999999999999999999976
No 119
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00 E-value=2.2e-39 Score=354.86 Aligned_cols=266 Identities=21% Similarity=0.320 Sum_probs=198.4
Q ss_pred hcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCCc---chHHHHHHHHHHHhcCCCcceeEEeeeecccccCCc
Q 039533 625 TSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHG---ASRSFIAECKALKSIRHRNLVKVLTACLGADYRGND 701 (949)
Q Consensus 625 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 701 (949)
.++|++.+.||+|+||.||+|++..+++.||||+++..... ....+.+|+.++++++||||+++++++.... ....
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~~~~ 89 (311)
T 3ork_A 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAET-PAGP 89 (311)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEE-TTEE
T ss_pred cCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccC-CCCc
Confidence 46799999999999999999999889999999999754322 2357889999999999999999999976544 1122
Q ss_pred cceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceE
Q 039533 702 FKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTAR 781 (949)
Q Consensus 702 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~k 781 (949)
..++||||+++++|.+++. ....+++.++..++.|++.||+|||++ +|+||||||+||+++.++.+|
T Consensus 90 ~~~lv~e~~~g~~L~~~l~----------~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~k 156 (311)
T 3ork_A 90 LPYIVMEYVDGVTLRDIVH----------TEGPMTPKRAIEVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVK 156 (311)
T ss_dssp EEEEEEECCCEEEHHHHHH----------HHCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEETTSCEE
T ss_pred ccEEEEecCCCCCHHHHHH----------hcCCCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEcCCCCEE
Confidence 4599999999999999996 234689999999999999999999988 899999999999999999999
Q ss_pred EeecccceecCCCCCc-cccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhcccc
Q 039533 782 VGDFGLARILSPDHTQ-TSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKA 860 (949)
Q Consensus 782 l~DfG~a~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~ 860 (949)
|+|||+++........ .......||+.|+|||++.+..++.++|||||||++|||++|+.||..........
T Consensus 157 l~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~------- 229 (311)
T 3ork_A 157 VMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAY------- 229 (311)
T ss_dssp ECCCSCC------------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHH-------
T ss_pred EeeccCcccccccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHH-------
Confidence 9999999876544321 22223558999999999999999999999999999999999999996432111000
Q ss_pred CCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHH-HHHHHHHhHH
Q 039533 861 LPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTN-VVHELQSIKN 933 (949)
Q Consensus 861 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~e-v~~~L~~i~~ 933 (949)
........+ +. ......+..+.+++.+|++.||++||++.+ +.+.+.++..
T Consensus 230 ------~~~~~~~~~-~~---------------~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~~ 281 (311)
T 3ork_A 230 ------QHVREDPIP-PS---------------ARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVHN 281 (311)
T ss_dssp ------HHHHCCCCC-HH---------------HHSTTCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHHT
T ss_pred ------HHhcCCCCC-cc---------------cccCCCCHHHHHHHHHHHhcCHhhChhhHHHHHHHHHHHhc
Confidence 000000000 00 000123556889999999999999996555 5556655543
No 120
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00 E-value=1.1e-38 Score=346.71 Aligned_cols=277 Identities=18% Similarity=0.210 Sum_probs=212.2
Q ss_pred HhcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCCcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCccc
Q 039533 624 ATSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFK 703 (949)
Q Consensus 624 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 703 (949)
..++|++.+.||+|+||.||+|++..+++.||||++..... .+.+.+|+.++++++|++++..+.++.. ..+..
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~~~~~i~~~~~~~~----~~~~~ 80 (296)
T 4hgt_A 7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGA----EGDYN 80 (296)
T ss_dssp ----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC-----CCCHHHHHHHHHHHTTSTTCCCEEEEEE----ETTEE
T ss_pred cCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeeccccc--chHHHHHHHHHHHhcCCCCCCeeeeecC----CCCce
Confidence 45789999999999999999999988999999998764432 2458899999999999888887776643 23467
Q ss_pred eeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeee---cCCCce
Q 039533 704 ASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLL---DDYMTA 780 (949)
Q Consensus 704 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll---~~~~~~ 780 (949)
++||||+ +++|.+++.. ....+++.++..++.|++.||+|||++ +|+||||||+||++ +.++.+
T Consensus 81 ~lv~e~~-~~~L~~~~~~---------~~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~~~~ 147 (296)
T 4hgt_A 81 VMVMELL-GPSLEDLFNF---------CSRKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLV 147 (296)
T ss_dssp EEEEECC-CCBHHHHHHH---------TTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECCGGGTTCE
T ss_pred EEEEEcc-CCCHHHHHHH---------hcCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeeeeccCCCCeE
Confidence 9999999 9999999862 234589999999999999999999988 89999999999999 788999
Q ss_pred EEeecccceecCCCCCc-----cccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhh
Q 039533 781 RVGDFGLARILSPDHTQ-----TSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHN 855 (949)
Q Consensus 781 kl~DfG~a~~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~ 855 (949)
||+|||+++........ .......||+.|+|||++.+..++.++|||||||++|||++|+.||.........
T Consensus 148 kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~--- 224 (296)
T 4hgt_A 148 YIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKR--- 224 (296)
T ss_dssp EECCCTTCEECBCTTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSS---
T ss_pred EEecCccceeccCcccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhh---
Confidence 99999999876554321 1122456999999999999999999999999999999999999999643221100
Q ss_pred hccccCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHHhHHhh
Q 039533 856 FGRKALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHELQSIKNIL 935 (949)
Q Consensus 856 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~~~~ 935 (949)
.....+........ ........+..+.+++.+|++.||++|||++||++.|+++....
T Consensus 225 -------~~~~~~~~~~~~~~---------------~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~~~~~ 282 (296)
T 4hgt_A 225 -------QKYERISEKKMSTP---------------IEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQ 282 (296)
T ss_dssp -------SHHHHHHHHHHHSC---------------HHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHH
T ss_pred -------hhhhhhhcccccch---------------hhhhhccCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHh
Confidence 00000000000000 00000123567899999999999999999999999999999988
Q ss_pred ccCCCCCCc
Q 039533 936 LGVELCPPC 944 (949)
Q Consensus 936 ~~~~~~~~~ 944 (949)
......|+.
T Consensus 283 ~~~~~~~~d 291 (296)
T 4hgt_A 283 GFSYDYVFD 291 (296)
T ss_dssp TCCTTCCCG
T ss_pred CCCccCccc
Confidence 777665543
No 121
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00 E-value=7.4e-39 Score=344.59 Aligned_cols=251 Identities=22% Similarity=0.277 Sum_probs=204.5
Q ss_pred hcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCCcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCccce
Q 039533 625 TSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFKA 704 (949)
Q Consensus 625 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 704 (949)
.++|++.+.||+|+||.||+|.+..++..||+|++........+.+.+|++++++++||||+++++++.... ..+
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-----~~~ 82 (277)
T 3f3z_A 8 NQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNT-----DIY 82 (277)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSS-----EEE
T ss_pred hhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCC-----eEE
Confidence 457899999999999999999999889999999998766666788999999999999999999999976544 789
Q ss_pred eEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeee---cCCCceE
Q 039533 705 SVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLL---DDYMTAR 781 (949)
Q Consensus 705 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll---~~~~~~k 781 (949)
+||||+++++|.+++. ....+++.++..++.|++.||+|||++ +|+||||||+||++ +.++.+|
T Consensus 83 lv~e~~~~~~L~~~~~----------~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~~ 149 (277)
T 3f3z_A 83 LVMELCTGGELFERVV----------HKRVFRESDAARIMKDVLSAVAYCHKL---NVAHRDLKPENFLFLTDSPDSPLK 149 (277)
T ss_dssp EEEECCCSCBHHHHHH----------HHCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCEE
T ss_pred EEEeccCCCcHHHHHH----------HcCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEecCCCCCcEE
Confidence 9999999999999886 234589999999999999999999988 89999999999999 7889999
Q ss_pred EeecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhccccC
Q 039533 782 VGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKAL 861 (949)
Q Consensus 782 l~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~ 861 (949)
|+|||.+.......... ...||+.|+|||++.+. ++.++||||||+++|||++|+.||....... .
T Consensus 150 l~Dfg~~~~~~~~~~~~---~~~~t~~y~aPE~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~--~-------- 215 (277)
T 3f3z_A 150 LIDFGLAARFKPGKMMR---TKVGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPFSAPTDSE--V-------- 215 (277)
T ss_dssp ECCCTTCEECCTTSCBC---CCCSCTTTCCHHHHTTC-BCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH--H--------
T ss_pred EEecccceeccCccchh---ccCCCCCccChHHhccc-CCchhhehhHHHHHHHHHHCCCCCCCCCHHH--H--------
Confidence 99999998776544322 34599999999998764 8999999999999999999999996432111 0
Q ss_pred CCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 039533 862 PDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVH 926 (949)
Q Consensus 862 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 926 (949)
...+...... .+. ......+..+.+++.+|++.||++|||+.|+++
T Consensus 216 ---~~~~~~~~~~-~~~---------------~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~ 261 (277)
T 3f3z_A 216 ---MLKIREGTFT-FPE---------------KDWLNVSPQAESLIRRLLTKSPKQRITSLQALE 261 (277)
T ss_dssp ---HHHHHHCCCC-CCH---------------HHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred ---HHHHHhCCCC-CCc---------------hhhhcCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 0001110000 000 001123557889999999999999999999986
No 122
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00 E-value=1e-38 Score=367.49 Aligned_cols=279 Identities=19% Similarity=0.160 Sum_probs=199.6
Q ss_pred hcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecC--CCcchHHHHHHHHHHHhcCCCcceeEEeeeecccc-cCCc
Q 039533 625 TSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQ--HHGASRSFIAECKALKSIRHRNLVKVLTACLGADY-RGND 701 (949)
Q Consensus 625 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~-~~~~ 701 (949)
.++|++.+.||+|+||.||+|.+..+++.||||++... .....+++.+|+.++++++||||+++++++..... +...
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 140 (464)
T 3ttj_A 61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQ 140 (464)
T ss_dssp ETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCC
T ss_pred cCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCC
Confidence 47899999999999999999999999999999999754 23345678899999999999999999999865432 2335
Q ss_pred cceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceE
Q 039533 702 FKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTAR 781 (949)
Q Consensus 702 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~k 781 (949)
..++||||+++ ++.+.+. ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+|
T Consensus 141 ~~~lv~E~~~~-~l~~~~~------------~~l~~~~~~~~~~qil~aL~~lH~~---~iiHrDlkp~NIll~~~~~~k 204 (464)
T 3ttj_A 141 DVYLVMELMDA-NLCQVIQ------------MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLK 204 (464)
T ss_dssp EEEEEEECCSE-EHHHHHT------------SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEE
T ss_pred eEEEEEeCCCC-CHHHHHh------------hcCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChHhEEEeCCCCEE
Confidence 67999999976 4666664 2388999999999999999999988 999999999999999999999
Q ss_pred EeecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhcc---
Q 039533 782 VGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGR--- 858 (949)
Q Consensus 782 l~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~--- 858 (949)
|+|||+|+........ ....||+.|+|||++.+..++.++||||+||++|||++|+.||......+ .+.....
T Consensus 205 l~DFG~a~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~-~~~~i~~~lg 280 (464)
T 3ttj_A 205 ILDFGLARTAGTSFMM---TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYID-QWNKVIEQLG 280 (464)
T ss_dssp ECCCCCC-----CCCC-------CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHHHC
T ss_pred EEEEEeeeecCCCccc---CCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHhcC
Confidence 9999999876543322 23569999999999999999999999999999999999999996432111 0000000
Q ss_pred c-------cCCCchhhhcccCCCCC---chhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 039533 859 K-------ALPDDVMDIVDSSLLPD---DEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVH 926 (949)
Q Consensus 859 ~-------~~~~~~~~~~d~~l~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 926 (949)
. .........++...... ........ ...............+.+++.+|++.||++|||++|+++
T Consensus 281 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~ 355 (464)
T 3ttj_A 281 TPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDS---LFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQ 355 (464)
T ss_dssp SCCHHHHTTSCHHHHHHHTTSCCCCCCCHHHHSCGG---GSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred CCCHHHHHHcchhhhhHhhcccccCCCChHHhCccc---ccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 0 00000111111100000 00000000 000000111233567899999999999999999999976
No 123
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00 E-value=9.7e-39 Score=353.39 Aligned_cols=258 Identities=22% Similarity=0.320 Sum_probs=200.3
Q ss_pred hcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCC-cchHHHHHHHHHHHhcCCCcceeEEeeeecccc------
Q 039533 625 TSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHH-GASRSFIAECKALKSIRHRNLVKVLTACLGADY------ 697 (949)
Q Consensus 625 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~------ 697 (949)
.++|++.+.||+|+||.||+|++..+++.||||+++.... ...+.+.+|++++++++||||+++++++.+...
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~ 84 (332)
T 3qd2_B 5 LTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEE 84 (332)
T ss_dssp HHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHH
T ss_pred hhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhh
Confidence 3578899999999999999999998999999999975443 345789999999999999999999999865431
Q ss_pred ----------------------------------------------cCCccceeEeeeccCCChhhhcCCCCCCCccccC
Q 039533 698 ----------------------------------------------RGNDFKASVYEFMHYGSLEEWLHPFTGEDEIDEA 731 (949)
Q Consensus 698 ----------------------------------------------~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~ 731 (949)
......++||||+++++|.+++.... .
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~-------~ 157 (332)
T 3qd2_B 85 MDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRC-------S 157 (332)
T ss_dssp HHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCC-------S
T ss_pred hhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhccc-------C
Confidence 11223799999999999999997321 2
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEeecccceecCCCCCc----------cccc
Q 039533 732 PRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVGDFGLARILSPDHTQ----------TSSF 801 (949)
Q Consensus 732 ~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~----------~~~~ 801 (949)
....++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++........ ....
T Consensus 158 ~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~ 234 (332)
T 3qd2_B 158 LEDREHGVCLHIFIQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHT 234 (332)
T ss_dssp GGGSCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCC
T ss_pred ccchhhHHHHHHHHHHHHHHHHHHhC---CeeecCCCcccEEEeCCCCEEEeecCcccccccchhhcccccccccccccc
Confidence 23457778899999999999999987 9999999999999999999999999999987654321 1112
Q ss_pred cccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhccccCCCchhhhcccCCCCCchhhh
Q 039533 802 SVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKALPDDVMDIVDSSLLPDDEDLI 881 (949)
Q Consensus 802 ~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 881 (949)
...||+.|+|||++.+..++.++|||||||++|||++|..|+..... .. ........
T Consensus 235 ~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~~~~----~~-----------~~~~~~~~-------- 291 (332)
T 3qd2_B 235 GQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMERVR----II-----------TDVRNLKF-------- 291 (332)
T ss_dssp SCC-CGGGSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHHHHH----HH-----------HHHHTTCC--------
T ss_pred ccCCCcCccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhHHHH----HH-----------HHhhccCC--------
Confidence 34699999999999999999999999999999999999877532100 00 00000000
Q ss_pred hhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 039533 882 LTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVH 926 (949)
Q Consensus 882 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 926 (949)
..........+.+++.+|++.||++|||++|+++
T Consensus 292 -----------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~ 325 (332)
T 3qd2_B 292 -----------PLLFTQKYPQEHMMVQDMLSPSPTERPEATDIIE 325 (332)
T ss_dssp -----------CHHHHHHCHHHHHHHHHHHCSSGGGSCCHHHHHH
T ss_pred -----------CcccccCChhHHHHHHHHccCCCCcCCCHHHHhh
Confidence 0112244556789999999999999999999986
No 124
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00 E-value=9.3e-39 Score=343.60 Aligned_cols=254 Identities=20% Similarity=0.289 Sum_probs=204.2
Q ss_pred hcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCC-CcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCccc
Q 039533 625 TSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQH-HGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFK 703 (949)
Q Consensus 625 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 703 (949)
.++|++.+.||+|+||.||+|++..+++.||||+++... ....+.+.+|+.++++++||||+++++++.... ..
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-----~~ 80 (276)
T 2yex_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGN-----IQ 80 (276)
T ss_dssp HHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETT-----EE
T ss_pred ecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCC-----EE
Confidence 467899999999999999999999889999999997543 234578899999999999999999999976544 78
Q ss_pred eeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEe
Q 039533 704 ASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVG 783 (949)
Q Consensus 704 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~ 783 (949)
++||||+++++|.+++. ....+++.++..++.|++.||+|||++ +|+||||||+||+++.++.+||+
T Consensus 81 ~lv~e~~~~~~L~~~l~----------~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~ 147 (276)
T 2yex_A 81 YLFLEYCSGGELFDRIE----------PDIGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKIS 147 (276)
T ss_dssp EEEEECCTTEEGGGGSB----------TTTBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEEC
T ss_pred EEEEEecCCCcHHHHHh----------hccCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCChHHEEEccCCCEEEe
Confidence 99999999999999986 234589999999999999999999987 99999999999999999999999
Q ss_pred ecccceecCCCCCccccccccCccCccCccccCCCcc-CCccchHHHHHHHHHHHhCCCCCccccccCchhhhhccccCC
Q 039533 784 DFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEV-STNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKALP 862 (949)
Q Consensus 784 DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~ 862 (949)
|||.+................||..|+|||++.+..+ +.++||||||+++|||++|+.||+...........+...
T Consensus 148 dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~--- 224 (276)
T 2yex_A 148 DFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEK--- 224 (276)
T ss_dssp CCTTCEECEETTEECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHHHHHHHTT---
T ss_pred eCCCccccCCCcchhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHHHHHhhhc---
Confidence 9999987644332222234568999999999987765 789999999999999999999997543222222111110
Q ss_pred CchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 039533 863 DDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVH 926 (949)
Q Consensus 863 ~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 926 (949)
...... ....+..+.+++.+|++.||++|||++|+++
T Consensus 225 ---------~~~~~~------------------~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 261 (276)
T 2yex_A 225 ---------KTYLNP------------------WKKIDSAPLALLHKILVENPSARITIPDIKK 261 (276)
T ss_dssp ---------CTTSTT------------------GGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred ---------ccccCc------------------hhhcCHHHHHHHHHHCCCCchhCCCHHHHhc
Confidence 000000 0123456788999999999999999999875
No 125
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00 E-value=2.1e-39 Score=368.47 Aligned_cols=264 Identities=17% Similarity=0.192 Sum_probs=206.8
Q ss_pred CHHHHHHHhcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCC---CcchHHHHHHHHHHHhcCCCcceeEEeeee
Q 039533 617 SYQDLYNATSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQH---HGASRSFIAECKALKSIRHRNLVKVLTACL 693 (949)
Q Consensus 617 ~~~~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~ 693 (949)
.+.++....++|++.++||+|+||+||+|++..+++.||+|+++... ......+.+|+.++.+++||||++++++|.
T Consensus 65 ~~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~ 144 (437)
T 4aw2_A 65 KVKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQ 144 (437)
T ss_dssp HHHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEE
T ss_pred hhhcccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEe
Confidence 34455566789999999999999999999999899999999997422 222345889999999999999999999976
Q ss_pred cccccCCccceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCee
Q 039533 694 GADYRGNDFKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVL 773 (949)
Q Consensus 694 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIl 773 (949)
+.+ ..++||||+++|+|.+++.. ....+++..++.++.|++.||+|||+. +|+||||||+|||
T Consensus 145 ~~~-----~~~lV~Ey~~gg~L~~~l~~---------~~~~l~e~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NIL 207 (437)
T 4aw2_A 145 DDN-----NLYLVMDYYVGGDLLTLLSK---------FEDRLPEEMARFYLAEMVIAIDSVHQL---HYVHRDIKPDNIL 207 (437)
T ss_dssp CSS-----EEEEEECCCTTCBHHHHHHT---------TTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEE
T ss_pred eCC-----EEEEEEecCCCCcHHHHHHH---------ccCCCCHHHHHHHHHHHHHHHHHHHhC---CeEecccCHHHee
Confidence 554 78999999999999999972 134689999999999999999999987 8999999999999
Q ss_pred ecCCCceEEeecccceecCCCCCccccccccCccCccCccccC-----CCccCCccchHHHHHHHHHHHhCCCCCccccc
Q 039533 774 LDDYMTARVGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGV-----GCEVSTNGDVYSYGILLLELVIGKKPIDIMFE 848 (949)
Q Consensus 774 l~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~ 848 (949)
++.++.+||+|||+|+......... .....||+.|+|||++. ...++.++|||||||++|||++|+.||.....
T Consensus 208 l~~~g~vkL~DFGla~~~~~~~~~~-~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~ 286 (437)
T 4aw2_A 208 MDMNGHIRLADFGSCLKLMEDGTVQ-SSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESL 286 (437)
T ss_dssp ECTTSCEEECCCTTCEECCTTSCEE-CCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSH
T ss_pred EcCCCCEEEcchhhhhhcccCCCcc-cccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCCh
Confidence 9999999999999998765544322 22356999999999986 56789999999999999999999999964321
Q ss_pred cCchhhhhccccCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCC--CCCHHHHHH
Q 039533 849 GDINLHNFGRKALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQD--RTNMTNVVH 926 (949)
Q Consensus 849 ~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~--RPs~~ev~~ 926 (949)
.+. +...... . . ....... ....+..+.+++.+|+..+|++ ||+++|+++
T Consensus 287 ~~~-~~~i~~~----~-~---~~~~p~~-------------------~~~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~ 338 (437)
T 4aw2_A 287 VET-YGKIMNH----K-E---RFQFPTQ-------------------VTDVSENAKDLIRRLICSREHRLGQNGIEDFKK 338 (437)
T ss_dssp HHH-HHHHHTH----H-H---HCCCCSS-------------------CCCSCHHHHHHHHTTSSCGGGCTTTTTTHHHHT
T ss_pred hHH-HHhhhhc----c-c---cccCCcc-------------------cccCCHHHHHHHHHHhcccccccCCCCHHHHhC
Confidence 110 0000000 0 0 0000000 0012445788999999988888 999999876
No 126
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00 E-value=4.8e-39 Score=356.11 Aligned_cols=252 Identities=22% Similarity=0.252 Sum_probs=197.3
Q ss_pred hcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCC---cchHHHHHHHHHHHhc-CCCcceeEEeeeecccccCC
Q 039533 625 TSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHH---GASRSFIAECKALKSI-RHRNLVKVLTACLGADYRGN 700 (949)
Q Consensus 625 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~ 700 (949)
.++|++.+.||+|+||.||+|++..+++.||+|+++.... ...+.+.+|..+++++ +||||+++++++...+
T Consensus 8 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~---- 83 (345)
T 3a8x_A 8 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTES---- 83 (345)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSS----
T ss_pred hhheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCC----
Confidence 3578899999999999999999998999999999975432 2345688999999988 8999999999976544
Q ss_pred ccceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCce
Q 039533 701 DFKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTA 780 (949)
Q Consensus 701 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~ 780 (949)
..++||||+++|+|.+++. ....+++..++.++.|++.||+|||++ +|+||||||+||+++.++++
T Consensus 84 -~~~lv~e~~~gg~L~~~l~----------~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~ 149 (345)
T 3a8x_A 84 -RLFFVIEYVNGGDLMFHMQ----------RQRKLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHI 149 (345)
T ss_dssp -EEEEEECCCCSCBHHHHHH----------HHSSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCE
T ss_pred -EEEEEEeCCCCCcHHHHHH----------HcCCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCE
Confidence 7899999999999999986 234689999999999999999999987 99999999999999999999
Q ss_pred EEeecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhcccc
Q 039533 781 RVGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKA 860 (949)
Q Consensus 781 kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~ 860 (949)
||+|||+++........ .....||+.|+|||++.+..++.++|||||||++|||++|+.||........... .
T Consensus 150 kL~DFG~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~-----~ 222 (345)
T 3a8x_A 150 KLTDYGMCKEGLRPGDT--TSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQ-----N 222 (345)
T ss_dssp EECCGGGCBCSCCTTCC--BCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC------------
T ss_pred EEEeccccccccCCCCc--ccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCccccccccc-----c
Confidence 99999999864332221 1245699999999999999999999999999999999999999964211100000 0
Q ss_pred CCCchh-hhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCH
Q 039533 861 LPDDVM-DIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNM 921 (949)
Q Consensus 861 ~~~~~~-~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~ 921 (949)
...... .+...... .+ ...+..+.+++.+|++.||++||++
T Consensus 223 ~~~~~~~~i~~~~~~-~p-------------------~~~s~~~~~li~~lL~~dP~~R~~~ 264 (345)
T 3a8x_A 223 TEDYLFQVILEKQIR-IP-------------------RSLSVKAASVLKSFLNKDPKERLGC 264 (345)
T ss_dssp CHHHHHHHHHHCCCC-CC-------------------TTSCHHHHHHHHHHTCSSTTTSTTC
T ss_pred cHHHHHHHHHcCCCC-CC-------------------CCCCHHHHHHHHHHhcCCHhHCCCC
Confidence 000000 01110000 00 1234567899999999999999996
No 127
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00 E-value=1.5e-38 Score=345.82 Aligned_cols=275 Identities=19% Similarity=0.217 Sum_probs=214.1
Q ss_pred hcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCCcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCccce
Q 039533 625 TSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFKA 704 (949)
Q Consensus 625 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 704 (949)
.++|++.+.||+|+||.||+|++..+++.||||++..... .+.+.+|+.++++++|++++..+.++.. .....+
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~~~~~i~~~~~~~~----~~~~~~ 81 (296)
T 3uzp_A 8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGA----EGDYNV 81 (296)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSS--CCHHHHHHHHHHHHTTSTTCCCEEEEEE----ETTEEE
T ss_pred ccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcc--hhHHHHHHHHHHHhhcCCCCCccccccC----CCCceE
Confidence 4689999999999999999999988999999999875432 3568999999999999887777766543 234679
Q ss_pred eEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeee---cCCCceE
Q 039533 705 SVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLL---DDYMTAR 781 (949)
Q Consensus 705 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll---~~~~~~k 781 (949)
+||||+ +++|.+++.. ....+++.++..++.|++.||+|||++ +|+||||||+||++ +.++.+|
T Consensus 82 lv~e~~-~~~L~~~~~~---------~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~~~~k 148 (296)
T 3uzp_A 82 MVMELL-GPSLEDLFNF---------CSRKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVY 148 (296)
T ss_dssp EEEECC-CCBHHHHHHH---------TTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECCGGGTTCEE
T ss_pred EEEEec-CCCHHHHHHh---------hccCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHeEEecCCCCCeEE
Confidence 999999 8999999862 234589999999999999999999988 99999999999999 4888999
Q ss_pred EeecccceecCCCCCcc-----ccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhh
Q 039533 782 VGDFGLARILSPDHTQT-----SSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNF 856 (949)
Q Consensus 782 l~DfG~a~~~~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~ 856 (949)
|+|||.++......... ......||+.|+|||++.+..++.++|||||||++|||++|+.||.........
T Consensus 149 l~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~---- 224 (296)
T 3uzp_A 149 IIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKR---- 224 (296)
T ss_dssp ECCCTTCEECBCTTTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSS----
T ss_pred EeeCCCcccccccccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhh----
Confidence 99999998765543211 112456999999999999999999999999999999999999999743211100
Q ss_pred ccccCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHHhHHhhc
Q 039533 857 GRKALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHELQSIKNILL 936 (949)
Q Consensus 857 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~~~~~ 936 (949)
+....+....... +. ......++..+.+++.+||+.||++|||++||++.|+++.....
T Consensus 225 ------~~~~~~~~~~~~~-------------~~--~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~~ 283 (296)
T 3uzp_A 225 ------QKYERISEKKMST-------------PI--EVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQG 283 (296)
T ss_dssp ------SHHHHHHHHHHHS-------------CH--HHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHTT
T ss_pred ------hhhhhhcccccCC-------------ch--HHHHhhCCHHHHHHHHHHHhcCcCcCCCHHHHHHHHHHHHHhcC
Confidence 0000000000000 00 00001335678999999999999999999999999999998877
Q ss_pred cCCCCCC
Q 039533 937 GVELCPP 943 (949)
Q Consensus 937 ~~~~~~~ 943 (949)
.....|+
T Consensus 284 ~~~~~~~ 290 (296)
T 3uzp_A 284 FSYDYVF 290 (296)
T ss_dssp CCSSCCC
T ss_pred Ccccccc
Confidence 7655544
No 128
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00 E-value=1.5e-39 Score=357.26 Aligned_cols=278 Identities=22% Similarity=0.299 Sum_probs=210.9
Q ss_pred CCCCCeeeeecCceEEEEEE----cCCCEEEEEEEEecCCC-cchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCcc
Q 039533 628 FSSANLVGVGSFGSVYKGII----DEGRTTIAVKVFNLQHH-GASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDF 702 (949)
Q Consensus 628 y~~~~~lg~G~~g~Vy~~~~----~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 702 (949)
|++.+.||+|+||.||+|.+ ..+++.||||+++.... ...+.+.+|++++++++||||+++++++...+ ...
T Consensus 33 ~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~---~~~ 109 (318)
T 3lxp_A 33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAG---AAS 109 (318)
T ss_dssp EEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETT---TTE
T ss_pred HhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCC---Cce
Confidence 38889999999999988865 34688999999975432 33467899999999999999999999986432 346
Q ss_pred ceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEE
Q 039533 703 KASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARV 782 (949)
Q Consensus 703 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl 782 (949)
.++||||+++|+|.+++.. ..+++.+++.++.|++.||+|||+. +|+||||||+||+++.++.+||
T Consensus 110 ~~lv~e~~~~~~L~~~l~~-----------~~~~~~~~~~i~~~l~~~l~~LH~~---~ivH~Dikp~Nil~~~~~~~kl 175 (318)
T 3lxp_A 110 LQLVMEYVPLGSLRDYLPR-----------HSIGLAQLLLFAQQICEGMAYLHAQ---HYIHRDLAARNVLLDNDRLVKI 175 (318)
T ss_dssp EEEEECCCTTCBHHHHGGG-----------SCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEE
T ss_pred EEEEEecccCCcHHHHHhh-----------CCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEEcCCCCEEE
Confidence 7999999999999999962 3489999999999999999999988 8999999999999999999999
Q ss_pred eecccceecCCCCCc-cccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhccccC
Q 039533 783 GDFGLARILSPDHTQ-TSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKAL 861 (949)
Q Consensus 783 ~DfG~a~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~ 861 (949)
+|||.++........ .......||..|+|||++.+..++.++||||||+++|||++|+.||............+.....
T Consensus 176 ~Dfg~a~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~ 255 (318)
T 3lxp_A 176 GDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQM 255 (318)
T ss_dssp CCGGGCEECCTTCSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHH
T ss_pred CCccccccccccccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccch
Confidence 999999987655432 1222345888899999999889999999999999999999999998643221111100000000
Q ss_pred C-CchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHHhHHhhccCCC
Q 039533 862 P-DDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHELQSIKNILLGVEL 940 (949)
Q Consensus 862 ~-~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~~~~~~~~~ 940 (949)
. ....+.++..... +....++..+.+++.+||+.||++|||++|+++.|+++.+.+....+
T Consensus 256 ~~~~~~~~~~~~~~~------------------~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~~~~~p 317 (318)
T 3lxp_A 256 TVLRLTELLERGERL------------------PRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVHEKYQGQAP 317 (318)
T ss_dssp HHHHHHHHHHTTCCC------------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHHC---
T ss_pred hHHHHHHHHhcccCC------------------CCCccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHhhccCCC
Confidence 0 0011111111110 11123456789999999999999999999999999999998876543
No 129
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00 E-value=5.2e-39 Score=355.65 Aligned_cols=274 Identities=21% Similarity=0.339 Sum_probs=210.5
Q ss_pred hcCCCCCCeeeeecCceEEEEEEc-------CCCEEEEEEEEecCCC-cchHHHHHHHHHHHhc-CCCcceeEEeeeecc
Q 039533 625 TSGFSSANLVGVGSFGSVYKGIID-------EGRTTIAVKVFNLQHH-GASRSFIAECKALKSI-RHRNLVKVLTACLGA 695 (949)
Q Consensus 625 ~~~y~~~~~lg~G~~g~Vy~~~~~-------~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~ 695 (949)
.++|++.+.||+|+||.||+|++. .+++.||||+++.... ...+.+.+|+++++++ +||||+++++++...
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~ 113 (334)
T 2pvf_A 34 RDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 113 (334)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred HhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEccC
Confidence 467899999999999999999985 3567899999875432 2346789999999999 899999999997654
Q ss_pred cccCCccceeEeeeccCCChhhhcCCCCCCCc------cccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCC
Q 039533 696 DYRGNDFKASVYEFMHYGSLEEWLHPFTGEDE------IDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKP 769 (949)
Q Consensus 696 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~------~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp 769 (949)
+ ..++||||+++|+|.+++........ .......+++.+++.++.|++.||+|||++ +|+||||||
T Consensus 114 ~-----~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp 185 (334)
T 2pvf_A 114 G-----PLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAA 185 (334)
T ss_dssp S-----CCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSG
T ss_pred C-----ceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCcc
Confidence 4 78999999999999999974321100 001124589999999999999999999987 999999999
Q ss_pred CCeeecCCCceEEeecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHh-CCCCCccccc
Q 039533 770 SNVLLDDYMTARVGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVI-GKKPIDIMFE 848 (949)
Q Consensus 770 ~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~ellt-g~~Pf~~~~~ 848 (949)
+||+++.++.+||+|||+++...............+|+.|+|||++.+..++.++|||||||++|||++ |+.||.....
T Consensus 186 ~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~ 265 (334)
T 2pvf_A 186 RNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPV 265 (334)
T ss_dssp GGEEECTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCH
T ss_pred ceEEEcCCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCCH
Confidence 999999999999999999988765543333334457889999999988889999999999999999999 9999864321
Q ss_pred cCchhhhhccccCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHH
Q 039533 849 GDINLHNFGRKALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHEL 928 (949)
Q Consensus 849 ~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L 928 (949)
.. .. ..+........ ...++..+.+++.+||+.||++|||+.|+++.|
T Consensus 266 ~~--~~------------~~~~~~~~~~~------------------~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L 313 (334)
T 2pvf_A 266 EE--LF------------KLLKEGHRMDK------------------PANCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 313 (334)
T ss_dssp HH--HH------------HHHHHTCCCCC------------------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred HH--HH------------HHHhcCCCCCC------------------CccCCHHHHHHHHHHccCChhhCcCHHHHHHHH
Confidence 10 00 00000000000 012345688999999999999999999999999
Q ss_pred HHhHHhhccC
Q 039533 929 QSIKNILLGV 938 (949)
Q Consensus 929 ~~i~~~~~~~ 938 (949)
+++.......
T Consensus 314 ~~l~~~~~~~ 323 (334)
T 2pvf_A 314 DRILTLTTNE 323 (334)
T ss_dssp HHHHHHHC--
T ss_pred HHHHhccccC
Confidence 9998776544
No 130
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00 E-value=6.4e-39 Score=367.07 Aligned_cols=206 Identities=23% Similarity=0.308 Sum_probs=173.0
Q ss_pred hcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCC--cchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCcc
Q 039533 625 TSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHH--GASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDF 702 (949)
Q Consensus 625 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 702 (949)
.++|.+.+.||+|+||.||+|++..+++.||||+++.... ...+++.+|++++++++||||+++++++...++.....
T Consensus 25 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~ 104 (432)
T 3n9x_A 25 PDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDE 104 (432)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred cCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCe
Confidence 4689999999999999999999999999999999975322 33468899999999999999999999987665545567
Q ss_pred ceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEE
Q 039533 703 KASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARV 782 (949)
Q Consensus 703 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl 782 (949)
.++||||++ ++|.+++. ....+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||
T Consensus 105 ~~lv~e~~~-~~L~~~~~----------~~~~l~~~~~~~i~~qil~aL~~LH~~---givHrDlkp~NILl~~~~~~kL 170 (432)
T 3n9x_A 105 LYIVLEIAD-SDLKKLFK----------TPIFLTEEHIKTILYNLLLGENFIHES---GIIHRDLKPANCLLNQDCSVKV 170 (432)
T ss_dssp EEEEEECCS-EEHHHHHH----------SSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEE
T ss_pred EEEEEecCC-cCHHHHHh----------ccCCCCHHHHHHHHHHHHHHHHHHHHC---CCCCCCCCHHHeEECCCCCEEE
Confidence 899999986 59999986 335689999999999999999999988 8999999999999999999999
Q ss_pred eecccceecCCCCCc--------------------cccccccCccCccCcccc-CCCccCCccchHHHHHHHHHHHhCCC
Q 039533 783 GDFGLARILSPDHTQ--------------------TSSFSVKGSLGYIAPEYG-VGCEVSTNGDVYSYGILLLELVIGKK 841 (949)
Q Consensus 783 ~DfG~a~~~~~~~~~--------------------~~~~~~~gt~~y~aPE~~-~~~~~~~~sDiwSlGvvl~elltg~~ 841 (949)
+|||+|+........ .......||+.|+|||++ .+..++.++||||+||++|||++|..
T Consensus 171 ~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~ 250 (432)
T 3n9x_A 171 CDFGLARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQ 250 (432)
T ss_dssp CCCTTCEEC-------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCT
T ss_pred ccCCCcccccccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhccc
Confidence 999999986543221 112346699999999985 56679999999999999999999777
Q ss_pred CCc
Q 039533 842 PID 844 (949)
Q Consensus 842 Pf~ 844 (949)
||.
T Consensus 251 p~~ 253 (432)
T 3n9x_A 251 SHI 253 (432)
T ss_dssp TTC
T ss_pred ccc
Confidence 764
No 131
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=100.00 E-value=9.1e-39 Score=367.22 Aligned_cols=359 Identities=19% Similarity=0.176 Sum_probs=225.8
Q ss_pred cCceeccccCCcccCcccCcEEeeccccccCcCCCCCCCCccceeecCCCccccccccccccCCCCCcEEECCCCCCCCC
Q 039533 97 QVNSFTHEIPSEIGGLRRLKVLALNNNSICGEIPTNISRCSTLIPIHPQNNQLVGKILSRFSSLSKTEILNLGSNHLTGS 176 (949)
Q Consensus 97 ~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~L~~L~~L~Ls~N~l~~~ 176 (949)
......+..+..++++++|++|+|++|.+++ +| .++.+++|++|++++|++++.. ++.+++|++|+|++|+|++.
T Consensus 26 ~~~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~-~~-~l~~l~~L~~L~Ls~n~l~~~~---~~~l~~L~~L~Ls~N~l~~~ 100 (457)
T 3bz5_A 26 AAFEMQATDTISEEQLATLTSLDCHNSSITD-MT-GIEKLTGLTKLICTSNNITTLD---LSQNTNLTYLACDSNKLTNL 100 (457)
T ss_dssp HHTTCCTTSEEEHHHHTTCCEEECCSSCCCC-CT-TGGGCTTCSEEECCSSCCSCCC---CTTCTTCSEEECCSSCCSCC
T ss_pred HhcCcCcccccChhHcCCCCEEEccCCCccc-Ch-hhcccCCCCEEEccCCcCCeEc---cccCCCCCEEECcCCCCcee
Confidence 3344455566678999999999999999996 46 6899999999999999998862 88999999999999999964
Q ss_pred CCCCcCCCCCccEEeccccccCCCCCCcccCCCccccccccCcccccccccccCCCCChhhhccccccccccCCC-CCCC
Q 039533 177 IPSSLGNLSSIHTISLAYNNLDGTIPNSFGWFENLVFLSLAANNLSVVENKLTGEVPSLEKLQRLQHFTITSNSL-GSGG 255 (949)
Q Consensus 177 ~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~l~~~~~~l~~l~~L~~L~l~~N~l-~~~~ 255 (949)
| ++++++|++|+|++|++++ +| ++.+++|++|++++|+++.++ +..+++|++|++++|+. +..
T Consensus 101 -~--~~~l~~L~~L~L~~N~l~~-l~--~~~l~~L~~L~l~~N~l~~l~---------l~~l~~L~~L~l~~n~~~~~~- 164 (457)
T 3bz5_A 101 -D--VTPLTKLTYLNCDTNKLTK-LD--VSQNPLLTYLNCARNTLTEID---------VSHNTQLTELDCHLNKKITKL- 164 (457)
T ss_dssp -C--CTTCTTCCEEECCSSCCSC-CC--CTTCTTCCEEECTTSCCSCCC---------CTTCTTCCEEECTTCSCCCCC-
T ss_pred -e--cCCCCcCCEEECCCCcCCe-ec--CCCCCcCCEEECCCCccceec---------cccCCcCCEEECCCCCccccc-
Confidence 3 8899999999999999986 44 888999999999988876432 44555666666666632 211
Q ss_pred CCCcchhccccccCcccEEEccCCCCCccCCchhhcccccccEEEccCccccCCCCCCCCCCCcccEEEeecceecccCC
Q 039533 256 NDDLSFLCSLTNATRLTWMHINSNNFGGLLPGCISNLSKTIKTLFLNNNKIYGSIPAGIGNFVNLQRLDMWNNQLSGTIP 335 (949)
Q Consensus 256 ~~~~~~~~~l~~~~~L~~L~L~~N~l~~~~p~~~~~l~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p 335 (949)
.+..+++|++|++++|++++. | +..+ ++|+.|++++|++++. .++.+++|++|+|++|++++ +|
T Consensus 165 --------~~~~l~~L~~L~ls~n~l~~l-~--l~~l-~~L~~L~l~~N~l~~~---~l~~l~~L~~L~Ls~N~l~~-ip 228 (457)
T 3bz5_A 165 --------DVTPQTQLTTLDCSFNKITEL-D--VSQN-KLLNRLNCDTNNITKL---DLNQNIQLTFLDCSSNKLTE-ID 228 (457)
T ss_dssp --------CCTTCTTCCEEECCSSCCCCC-C--CTTC-TTCCEEECCSSCCSCC---CCTTCTTCSEEECCSSCCSC-CC
T ss_pred --------ccccCCcCCEEECCCCcccee-c--cccC-CCCCEEECcCCcCCee---ccccCCCCCEEECcCCcccc-cC
Confidence 133344445555555544442 2 2222 2344444444444432 24444444444444444443 22
Q ss_pred CcccccCCCCEEecCCcccccccCcccccccccceeecccccccccCCCCCCCCCCCcEEEeeCccccCCCCCcccCCcc
Q 039533 336 PAIGELQNLKILGLNRNKLSGNIPPSIGNLKMLLNLFLNDNFLEVSIPSSLGQCESLIEINLSNNNLSGTIPPQFFSLSS 415 (949)
Q Consensus 336 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~ 415 (949)
++.+++|+.|++++|++++.. ++.+++|+.|++++| +|+.|++++|.+.+.+| +..+++
T Consensus 229 --~~~l~~L~~L~l~~N~l~~~~---~~~l~~L~~L~l~~n--------------~L~~L~l~~n~~~~~~~--~~~l~~ 287 (457)
T 3bz5_A 229 --VTPLTQLTYFDCSVNPLTELD---VSTLSKLTTLHCIQT--------------DLLEIDLTHNTQLIYFQ--AEGCRK 287 (457)
T ss_dssp --CTTCTTCSEEECCSSCCSCCC---CTTCTTCCEEECTTC--------------CCSCCCCTTCTTCCEEE--CTTCTT
T ss_pred --ccccCCCCEEEeeCCcCCCcC---HHHCCCCCEEeccCC--------------CCCEEECCCCccCCccc--cccccc
Confidence 344444444444444444321 223334444444333 23344444554444444 233444
Q ss_pred cceeeccCCCccCCCCccccccccccceeeeccccccccCCcccccccchhhcccCccccccccCCCcCCCCCCCEEECC
Q 039533 416 LSISLDWSRNKLTGSLPIEVGKLKILEFLYVYENRLEGEIPSTFGNCIRLEQLGMGGNLFQGPISSSLGSLRGLRVLDLS 495 (949)
Q Consensus 416 l~~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls 495 (949)
| +.|++++|.+.+.+|. ....|+.|++ .++++|+.|++++|+|++. .++.+++|+.||++
T Consensus 288 L-~~L~Ls~n~~l~~l~~---~~~~L~~L~l-------------~~~~~L~~L~L~~N~l~~l---~l~~l~~L~~L~l~ 347 (457)
T 3bz5_A 288 I-KELDVTHNTQLYLLDC---QAAGITELDL-------------SQNPKLVYLYLNNTELTEL---DVSHNTKLKSLSCV 347 (457)
T ss_dssp C-CCCCCTTCTTCCEEEC---TTCCCSCCCC-------------TTCTTCCEEECTTCCCSCC---CCTTCTTCSEEECC
T ss_pred C-CEEECCCCcccceecc---CCCcceEech-------------hhcccCCEEECCCCccccc---ccccCCcCcEEECC
Confidence 4 4455555554444442 2233333333 4447899999999999984 39999999999999
Q ss_pred CCcCCCcCcccccCCccceEeCCCCcCcCcccccccccccccccccCCC
Q 039533 496 QNNLSGEIPKFLAGLSLNNLNLSYNDLEGMVTTEGVFKNASATRILGNS 544 (949)
Q Consensus 496 ~N~l~~~~p~~~~~~~L~~l~ls~N~l~~~~~~~~~~~~~~~~~~~gn~ 544 (949)
+|+|++. | .|..|++++|.++|. +.+..+....+..|.
T Consensus 348 ~N~l~~l-~------~L~~L~l~~n~l~g~----~~~~~l~~l~l~~N~ 385 (457)
T 3bz5_A 348 NAHIQDF-S------SVGKIPALNNNFEAE----GQTITMPKETLTNNS 385 (457)
T ss_dssp SSCCCBC-T------TGGGSSGGGTSEEEE----EEEEECCCBCCBTTB
T ss_pred CCCCCCc-c------ccccccccCCcEEec----ceeeecCccccccCc
Confidence 9999972 2 367788999999987 233445555555553
No 132
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00 E-value=8e-39 Score=358.36 Aligned_cols=247 Identities=22% Similarity=0.259 Sum_probs=195.5
Q ss_pred CCeeeeecCceEEEEEEcCCCEEEEEEEEecCCCcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCccceeEeeec
Q 039533 631 ANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFKASVYEFM 710 (949)
Q Consensus 631 ~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~ 710 (949)
.+.||+|+||.||+|++..+++.||+|+++.......+.+.+|++++++++||||+++++++...+ ..++||||+
T Consensus 94 ~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~-----~~~lv~E~~ 168 (373)
T 2x4f_A 94 TEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKN-----DIVLVMEYV 168 (373)
T ss_dssp EEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSS-----EEEEEEECC
T ss_pred ceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECC-----EEEEEEeCC
Confidence 568999999999999999899999999998765555678999999999999999999999976544 789999999
Q ss_pred cCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeee--cCCCceEEeecccc
Q 039533 711 HYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLL--DDYMTARVGDFGLA 788 (949)
Q Consensus 711 ~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll--~~~~~~kl~DfG~a 788 (949)
++++|.+++.. ....+++.++..++.|++.||+|||+. +|+||||||+||++ +.++.+||+|||++
T Consensus 169 ~~~~L~~~l~~---------~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a 236 (373)
T 2x4f_A 169 DGGELFDRIID---------ESYNLTELDTILFMKQICEGIRHMHQM---YILHLDLKPENILCVNRDAKQIKIIDFGLA 236 (373)
T ss_dssp TTCEEHHHHHH---------TGGGCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEETTTTEEEECCCSSC
T ss_pred CCCcHHHHHHh---------cCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEEecCCCCcEEEEeCCCc
Confidence 99999998852 234589999999999999999999987 89999999999999 57789999999999
Q ss_pred eecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhccccCCCchhhh
Q 039533 789 RILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKALPDDVMDI 868 (949)
Q Consensus 789 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~ 868 (949)
+......... ...||+.|+|||++.+..++.++|||||||++|||++|+.||....... .+ ..+
T Consensus 237 ~~~~~~~~~~---~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~-~~------------~~i 300 (373)
T 2x4f_A 237 RRYKPREKLK---VNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAE-TL------------NNI 300 (373)
T ss_dssp EECCTTCBCC---CCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHHH-HH------------HHH
T ss_pred eecCCccccc---cccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHH-HH------------HHH
Confidence 9876544322 3459999999999998899999999999999999999999996432110 01 111
Q ss_pred cccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 039533 869 VDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVH 926 (949)
Q Consensus 869 ~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 926 (949)
.......... .....+..+.+++.+|++.||++|||+.|+++
T Consensus 301 ~~~~~~~~~~----------------~~~~~~~~~~~li~~~L~~dp~~Rps~~e~l~ 342 (373)
T 2x4f_A 301 LACRWDLEDE----------------EFQDISEEAKEFISKLLIKEKSWRISASEALK 342 (373)
T ss_dssp HHTCCCSCSG----------------GGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred HhccCCCChh----------------hhccCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 1111000000 00123456889999999999999999999987
No 133
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00 E-value=2.9e-39 Score=356.03 Aligned_cols=260 Identities=24% Similarity=0.398 Sum_probs=199.6
Q ss_pred hcCCCCCCeeeeecCceEEEEEEcCCCEE----EEEEEEecC-CCcchHHHHHHHHHHHhcCCCcceeEEeeeecccccC
Q 039533 625 TSGFSSANLVGVGSFGSVYKGIIDEGRTT----IAVKVFNLQ-HHGASRSFIAECKALKSIRHRNLVKVLTACLGADYRG 699 (949)
Q Consensus 625 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~----vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 699 (949)
.++|++.+.||+|+||.||+|++..+++. ||+|.+... .....+.+.+|+.++++++||||+++++++...
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~---- 89 (327)
T 3lzb_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS---- 89 (327)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESS----
T ss_pred HhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecC----
Confidence 36789999999999999999999776664 577776533 234457899999999999999999999998643
Q ss_pred CccceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCc
Q 039533 700 NDFKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMT 779 (949)
Q Consensus 700 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~ 779 (949)
..++|+||+++|+|.+++.. ....+++..++.|+.|++.||+|||++ +|+||||||+||+++.++.
T Consensus 90 --~~~~v~~~~~~g~L~~~l~~---------~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~ 155 (327)
T 3lzb_A 90 --TVQLITQLMPFGCLLDYVRE---------HKDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQH 155 (327)
T ss_dssp --SEEEEECCCSSCBHHHHHHH---------TTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTE
T ss_pred --CceEEEEecCCCcHHHHHHh---------cCCCCCHHHHHHHHHHHHHHHHHHhhC---CCcCCCCCHHHEEEcCCCC
Confidence 37899999999999999962 234589999999999999999999988 8999999999999999999
Q ss_pred eEEeecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHh-CCCCCccccccCchhhhhcc
Q 039533 780 ARVGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVI-GKKPIDIMFEGDINLHNFGR 858 (949)
Q Consensus 780 ~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~ellt-g~~Pf~~~~~~~~~~~~~~~ 858 (949)
+||+|||+++...............+|+.|+|||++.+..++.++|||||||++|||++ |+.||+......
T Consensus 156 ~kL~DfG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~-------- 227 (327)
T 3lzb_A 156 VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE-------- 227 (327)
T ss_dssp EEECCTTC----------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG--------
T ss_pred EEEccCcceeEccCccccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHH--------
Confidence 99999999987755444333334457889999999999899999999999999999999 999996432221
Q ss_pred ccCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHHhHHh
Q 039533 859 KALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHELQSIKNI 934 (949)
Q Consensus 859 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~~~ 934 (949)
....+........ ...++..+.+++.+||+.||++|||+.|+++.|+++...
T Consensus 228 ------~~~~~~~~~~~~~------------------~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~ 279 (327)
T 3lzb_A 228 ------ISSILEKGERLPQ------------------PPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMARD 279 (327)
T ss_dssp ------HHHHHHTTCCCCC------------------CTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHTS
T ss_pred ------HHHHHHcCCCCCC------------------CccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhC
Confidence 1111111100000 012344688999999999999999999999999998754
No 134
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00 E-value=1.4e-38 Score=350.09 Aligned_cols=252 Identities=20% Similarity=0.229 Sum_probs=203.4
Q ss_pred hcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCCc------chHHHHHHHHHHHhcCCCcceeEEeeeeccccc
Q 039533 625 TSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHG------ASRSFIAECKALKSIRHRNLVKVLTACLGADYR 698 (949)
Q Consensus 625 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 698 (949)
.++|++.+.||+|+||.||+|++..+++.||+|+++..... ..+.+.+|+.++++++||||+++++++....
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-- 88 (321)
T 2a2a_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRT-- 88 (321)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSS--
T ss_pred hccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCC--
Confidence 35689999999999999999999989999999999754322 2467999999999999999999999976544
Q ss_pred CCccceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCC
Q 039533 699 GNDFKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYM 778 (949)
Q Consensus 699 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~ 778 (949)
..++||||+++++|.+++. ....+++..+..++.|++.||+|||++ +|+||||||+||+++.++
T Consensus 89 ---~~~lv~e~~~~~~L~~~l~----------~~~~~~~~~~~~i~~qi~~aL~~lH~~---~ivH~dikp~NIl~~~~~ 152 (321)
T 2a2a_A 89 ---DVVLILELVSGGELFDFLA----------QKESLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKN 152 (321)
T ss_dssp ---EEEEEECCCCSCBHHHHHH----------TCSCEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTT
T ss_pred ---EEEEEEEcCCCCcHHHHHH----------hcCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCChHHEEEecCC
Confidence 7899999999999999996 234588999999999999999999987 999999999999999887
Q ss_pred ----ceEEeecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccccccCchhh
Q 039533 779 ----TARVGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLH 854 (949)
Q Consensus 779 ----~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~ 854 (949)
.+||+|||+++......... ...||+.|+|||++.+..++.++|||||||++|||++|+.||....... ..
T Consensus 153 ~~~~~~kl~Dfg~~~~~~~~~~~~---~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~--~~ 227 (321)
T 2a2a_A 153 IPIPHIKLIDFGLAHEIEDGVEFK---NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE--TL 227 (321)
T ss_dssp SSSCCEEECCCTTCEECCTTCCCC---CCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHH--HH
T ss_pred CCcCCEEEccCccceecCcccccc---ccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCHHH--HH
Confidence 79999999998876543322 3459999999999999899999999999999999999999996332110 00
Q ss_pred hhccccCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 039533 855 NFGRKALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVH 926 (949)
Q Consensus 855 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 926 (949)
..+....... +. ......+..+.+++.+|++.||++|||+.|+++
T Consensus 228 -----------~~i~~~~~~~-~~---------------~~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~ 272 (321)
T 2a2a_A 228 -----------ANITSVSYDF-DE---------------EFFSHTSELAKDFIRKLLVKETRKRLTIQEALR 272 (321)
T ss_dssp -----------HHHHTTCCCC-CH---------------HHHTTCCHHHHHHHHTTSCSSTTTSCCHHHHHH
T ss_pred -----------HHHHhccccc-Ch---------------hhhcccCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 0000000000 00 001123456889999999999999999999986
No 135
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00 E-value=4.2e-39 Score=372.37 Aligned_cols=202 Identities=24% Similarity=0.314 Sum_probs=160.9
Q ss_pred hcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCC--cchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCcc
Q 039533 625 TSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHH--GASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDF 702 (949)
Q Consensus 625 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 702 (949)
.++|.+.+.||+|+||.||+|++..+++.||||++..... ...+++.+|++++++++||||+++++++...+.+....
T Consensus 52 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 131 (458)
T 3rp9_A 52 PDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDE 131 (458)
T ss_dssp CTTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred CCCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCce
Confidence 3689999999999999999999998999999999864332 23467899999999999999999999987666556668
Q ss_pred ceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEE
Q 039533 703 KASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARV 782 (949)
Q Consensus 703 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl 782 (949)
.++||||+ +++|.+++. ....+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||
T Consensus 132 ~~lv~e~~-~~~L~~~~~----------~~~~l~~~~~~~~~~qi~~aL~~LH~~---~iiHrDlKp~NILl~~~~~~kl 197 (458)
T 3rp9_A 132 LYVVLEIA-DSDFKKLFR----------TPVYLTELHIKTLLYNLLVGVKYVHSA---GILHRDLKPANCLVNQDCSVKV 197 (458)
T ss_dssp EEEEECCC-SEEHHHHHH----------SSCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEE
T ss_pred EEEEEecc-ccchhhhcc----------cCCCCCHHHHHHHHHHHHHHHHHHHhC---CcCCCCCChhhEEECCCCCEee
Confidence 99999998 468999986 335689999999999999999999988 9999999999999999999999
Q ss_pred eecccceecCCCCCc-------------------------cccccccCccCccCcccc-CCCccCCccchHHHHHHHHHH
Q 039533 783 GDFGLARILSPDHTQ-------------------------TSSFSVKGSLGYIAPEYG-VGCEVSTNGDVYSYGILLLEL 836 (949)
Q Consensus 783 ~DfG~a~~~~~~~~~-------------------------~~~~~~~gt~~y~aPE~~-~~~~~~~~sDiwSlGvvl~el 836 (949)
+|||+|+........ .......||+.|+|||++ .+..++.++|||||||++|||
T Consensus 198 ~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~el 277 (458)
T 3rp9_A 198 CDFGLARTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAEL 277 (458)
T ss_dssp CCCTTCBCTTSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHH
T ss_pred cccccchhccCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHH
Confidence 999999876533211 112245689999999976 456799999999999999999
Q ss_pred HhCC
Q 039533 837 VIGK 840 (949)
Q Consensus 837 ltg~ 840 (949)
++|.
T Consensus 278 ltg~ 281 (458)
T 3rp9_A 278 LNMI 281 (458)
T ss_dssp HTTS
T ss_pred HHhc
Confidence 9943
No 136
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00 E-value=4.1e-39 Score=374.65 Aligned_cols=258 Identities=25% Similarity=0.420 Sum_probs=209.5
Q ss_pred hcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCCcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCccce
Q 039533 625 TSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFKA 704 (949)
Q Consensus 625 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 704 (949)
.++|++.+.||+|+||.||+|++..++..||||+++... ...+.+.+|+.++++++||||++++++|...+ ..+
T Consensus 219 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~-----~~~ 292 (495)
T 1opk_A 219 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREP-----PFY 292 (495)
T ss_dssp GGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-----SCE
T ss_pred HHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcc-cchHHHHHHHHHHHhcCCCCEeeEEEEEecCC-----cEE
Confidence 346788899999999999999999889999999987543 34578999999999999999999999986544 789
Q ss_pred eEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEee
Q 039533 705 SVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVGD 784 (949)
Q Consensus 705 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~D 784 (949)
+||||+++|+|.+++... ....+++..++.++.|++.||+|||++ +|+||||||+|||++.++.+||+|
T Consensus 293 lv~E~~~~g~L~~~l~~~--------~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~D 361 (495)
T 1opk_A 293 IITEFMTYGNLLDYLREC--------NRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRNLAARNCLVGENHLVKVAD 361 (495)
T ss_dssp EEEECCTTCBHHHHHHHS--------CTTTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGGGCEEECC
T ss_pred EEEEccCCCCHHHHHHhc--------CcCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChhhEEECCCCcEEEee
Confidence 999999999999999631 234589999999999999999999987 899999999999999999999999
Q ss_pred cccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHh-CCCCCccccccCchhhhhccccCCC
Q 039533 785 FGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVI-GKKPIDIMFEGDINLHNFGRKALPD 863 (949)
Q Consensus 785 fG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~ 863 (949)
||+++....... .......++..|+|||++.+..++.++|||||||++|||+| |+.||.......
T Consensus 362 FG~a~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~~------------- 427 (495)
T 1opk_A 362 FGLSRLMTGDTY-TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ------------- 427 (495)
T ss_dssp TTCEECCTTCCE-ECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG-------------
T ss_pred cccceeccCCce-eecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHHH-------------
Confidence 999987654332 22223446789999999998899999999999999999999 999986432111
Q ss_pred chhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHHhH
Q 039533 864 DVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHELQSIK 932 (949)
Q Consensus 864 ~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~ 932 (949)
+.+.+....... ....++..+.+++.+||+.||++|||+.||++.|+.+.
T Consensus 428 -~~~~~~~~~~~~------------------~~~~~~~~l~~li~~cl~~dP~~RPs~~el~~~L~~~~ 477 (495)
T 1opk_A 428 -VYELLEKDYRME------------------RPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMF 477 (495)
T ss_dssp -HHHHHHTTCCCC------------------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSC
T ss_pred -HHHHHHcCCCCC------------------CCCCCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHH
Confidence 111111111000 01134567889999999999999999999999999874
No 137
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00 E-value=1.3e-39 Score=352.87 Aligned_cols=254 Identities=22% Similarity=0.392 Sum_probs=200.3
Q ss_pred hcCCCCCCeeeeecCceEEEEEEcCCC-------EEEEEEEEecCCCcchHHHHHHHHHHHhcCCCcceeEEeeeecccc
Q 039533 625 TSGFSSANLVGVGSFGSVYKGIIDEGR-------TTIAVKVFNLQHHGASRSFIAECKALKSIRHRNLVKVLTACLGADY 697 (949)
Q Consensus 625 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~-------~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 697 (949)
.++|.+.+.||+|+||.||+|++..++ +.||+|++........+.+.+|+.++++++||||+++++++...+
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~- 85 (289)
T 4fvq_A 7 NEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGD- 85 (289)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTT-
T ss_pred hhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCC-
Confidence 357888999999999999999987655 579999997666666688999999999999999999999976544
Q ss_pred cCCccceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCC
Q 039533 698 RGNDFKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDY 777 (949)
Q Consensus 698 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~ 777 (949)
..++||||+++|+|.+++.. ....+++..+..++.|++.||+|||++ +|+||||||+||+++.+
T Consensus 86 ----~~~lv~e~~~~~~L~~~l~~---------~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~ 149 (289)
T 4fvq_A 86 ----ENILVQEFVKFGSLDTYLKK---------NKNCINILWKLEVAKQLAAAMHFLEEN---TLIHGNVCAKNILLIRE 149 (289)
T ss_dssp ----CCEEEEECCTTCBHHHHHHH---------TGGGCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEEEC
T ss_pred ----CCEEEEECCCCCCHHHHHHh---------CCCCCCHHHHHHHHHHHHHHHHHHhhC---CeECCCcCcceEEEecC
Confidence 77999999999999999962 233489999999999999999999988 89999999999999988
Q ss_pred Cc--------eEEeecccceecCCCCCccccccccCccCccCccccCC-CccCCccchHHHHHHHHHHHhCCCCCccccc
Q 039533 778 MT--------ARVGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVG-CEVSTNGDVYSYGILLLELVIGKKPIDIMFE 848 (949)
Q Consensus 778 ~~--------~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~ 848 (949)
+. +||+|||.+....... ...||..|+|||++.+ ..++.++|||||||++|||++|..|+.....
T Consensus 150 ~~~~~~~~~~~kl~Dfg~~~~~~~~~------~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~ 223 (289)
T 4fvq_A 150 EDRKTGNPPFIKLSDPGISITVLPKD------ILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALD 223 (289)
T ss_dssp CBGGGTBCCEEEECCCCSCTTTSCHH------HHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSC
T ss_pred CcccccccceeeeccCcccccccCcc------ccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccc
Confidence 77 9999999986543221 2347899999999887 6789999999999999999996554422111
Q ss_pred cCchhhhhccccCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHH
Q 039533 849 GDINLHNFGRKALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHEL 928 (949)
Q Consensus 849 ~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L 928 (949)
..... .... .....+. ..+..+.+++.+||+.||++|||++|+++.|
T Consensus 224 ~~~~~-~~~~-----------~~~~~~~---------------------~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l 270 (289)
T 4fvq_A 224 SQRKL-QFYE-----------DRHQLPA---------------------PKAAELANLINNCMDYEPDHRPSFRAIIRDL 270 (289)
T ss_dssp HHHHH-HHHH-----------TTCCCCC---------------------CSSCTTHHHHHHHSCSSGGGSCCHHHHHHHH
T ss_pred hHHHH-HHhh-----------ccCCCCC---------------------CCCHHHHHHHHHHcCCChhHCcCHHHHHHHH
Confidence 10000 0000 0000000 0123467899999999999999999999999
Q ss_pred HHhHHh
Q 039533 929 QSIKNI 934 (949)
Q Consensus 929 ~~i~~~ 934 (949)
+++...
T Consensus 271 ~~l~~p 276 (289)
T 4fvq_A 271 NSLFTP 276 (289)
T ss_dssp HTCC--
T ss_pred HHhcCC
Confidence 988654
No 138
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00 E-value=7.5e-39 Score=350.21 Aligned_cols=277 Identities=24% Similarity=0.308 Sum_probs=202.8
Q ss_pred HhcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCC-----CcchHHHHHHHHHHHhcC---CCcceeEEeeeecc
Q 039533 624 ATSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQH-----HGASRSFIAECKALKSIR---HRNLVKVLTACLGA 695 (949)
Q Consensus 624 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~---h~niv~~~~~~~~~ 695 (949)
..++|++.+.||+|+||+||+|++..+++.||||+++... ......+.+|++++++++ ||||+++++++...
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~ 86 (308)
T 3g33_A 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATS 86 (308)
T ss_dssp ---CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEEC
T ss_pred cccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeecc
Confidence 4578999999999999999999998899999999997432 122356778888877774 99999999998765
Q ss_pred cccCCccceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeec
Q 039533 696 DYRGNDFKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLD 775 (949)
Q Consensus 696 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~ 775 (949)
........++||||+. ++|.+++... ....+++.++..++.|++.||+|||++ +|+||||||+||+++
T Consensus 87 ~~~~~~~~~lv~e~~~-~~L~~~~~~~--------~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~ 154 (308)
T 3g33_A 87 RTDREIKVTLVFEHVD-QDLRTYLDKA--------PPPGLPAETIKDLMRQFLRGLDFLHAN---CIVHRDLKPENILVT 154 (308)
T ss_dssp CSSSEEEEEEEEECCC-CBHHHHHHTC--------CTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCTTTEEEC
T ss_pred CCCCceeEEEEehhhh-cCHHHHHhhc--------cCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEc
Confidence 5333445799999997 5999998732 223489999999999999999999988 899999999999999
Q ss_pred CCCceEEeecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccccccCch--h
Q 039533 776 DYMTARVGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDIN--L 853 (949)
Q Consensus 776 ~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~--~ 853 (949)
.++.+||+|||+++......... ...||+.|+|||++.+..++.++|||||||++|||++|+.||......+.. .
T Consensus 155 ~~~~~kl~Dfg~a~~~~~~~~~~---~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i 231 (308)
T 3g33_A 155 SGGTVKLADFGLARIYSYQMALT---PVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKI 231 (308)
T ss_dssp TTSCEEECSCSCTTTSTTCCCSG---GGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHHHHHHH
T ss_pred CCCCEEEeeCccccccCCCcccC---CccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence 99999999999998765443322 356899999999999999999999999999999999999999644322110 0
Q ss_pred hhhccccCCCchhh---hcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 039533 854 HNFGRKALPDDVMD---IVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVH 926 (949)
Q Consensus 854 ~~~~~~~~~~~~~~---~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 926 (949)
...........+.. ..+....... . ........+.+..+.+++.+|++.||++|||+.|+++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~---~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 296 (308)
T 3g33_A 232 FDLIGLPPEDDWPRDVSLPRGAFPPRG--------P---RPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQ 296 (308)
T ss_dssp HHHHCCCCTTTSCSSCSSCGGGSCCCC--------C---CCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred HHHhCCCChhhccchhhccccccCCCC--------C---CcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhc
Confidence 00000000000000 0000000000 0 0000001133467889999999999999999999875
No 139
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=4.9e-39 Score=359.84 Aligned_cols=264 Identities=24% Similarity=0.404 Sum_probs=196.9
Q ss_pred CCCCCCeeeeecCceEEEEEEcCC---CEEEEEEEEecCC-CcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCcc
Q 039533 627 GFSSANLVGVGSFGSVYKGIIDEG---RTTIAVKVFNLQH-HGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDF 702 (949)
Q Consensus 627 ~y~~~~~lg~G~~g~Vy~~~~~~~---~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 702 (949)
.|.+.+.||+|+||.||+|++..+ +..||||+++... ....+++.+|+.++++++||||+++++++... +..
T Consensus 90 ~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~----~~~ 165 (373)
T 3c1x_A 90 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRS----EGS 165 (373)
T ss_dssp EEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCC----SSC
T ss_pred eeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcC----CCC
Confidence 355668999999999999997532 2468999986433 33457899999999999999999999987532 236
Q ss_pred ceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEE
Q 039533 703 KASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARV 782 (949)
Q Consensus 703 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl 782 (949)
.++||||+++|+|.+++.. ....+++.++..++.|+++||+|||++ +|+||||||+||+++.++.+||
T Consensus 166 ~~lv~e~~~~g~L~~~l~~---------~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~kL 233 (373)
T 3c1x_A 166 PLVVLPYMKHGDLRNFIRN---------ETHNPTVKDLIGFGLQVAKGMKFLASK---KFVHRDLAARNCMLDEKFTVKV 233 (373)
T ss_dssp CEEEEECCTTCBHHHHHHC---------TTCCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEE
T ss_pred eEEEEECCCCCCHHHHHhh---------cccCCCHHHHHHHHHHHHHHHHHHHHC---CEecCccchheEEECCCCCEEE
Confidence 7899999999999999962 234578999999999999999999988 9999999999999999999999
Q ss_pred eecccceecCCCCCc--cccccccCccCccCccccCCCccCCccchHHHHHHHHHHHh-CCCCCccccccCchhhhhccc
Q 039533 783 GDFGLARILSPDHTQ--TSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVI-GKKPIDIMFEGDINLHNFGRK 859 (949)
Q Consensus 783 ~DfG~a~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~ellt-g~~Pf~~~~~~~~~~~~~~~~ 859 (949)
+|||+++........ .......+|+.|+|||++.+..++.++|||||||++|||+| |.+||......+. ...
T Consensus 234 ~DFG~a~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~~--~~~--- 308 (373)
T 3c1x_A 234 ADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDI--TVY--- 308 (373)
T ss_dssp CCC---------------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSCH--HHH---
T ss_pred eeccccccccccccccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHHH--HHH---
Confidence 999999876443221 11123457889999999998899999999999999999999 6777754322111 000
Q ss_pred cCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHHhHHhhccC
Q 039533 860 ALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHELQSIKNILLGV 938 (949)
Q Consensus 860 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~~~~~~~ 938 (949)
+........+ ..++..+.+++.+||+.||++|||++|+++.|+++...+.+.
T Consensus 309 --------~~~~~~~~~p-------------------~~~~~~l~~li~~cl~~dp~~RPs~~ell~~L~~i~~~~~~~ 360 (373)
T 3c1x_A 309 --------LLQGRRLLQP-------------------EYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIGE 360 (373)
T ss_dssp --------HHTTCCCCCC-------------------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTCCSC
T ss_pred --------HHcCCCCCCC-------------------CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcccc
Confidence 0000000000 123456889999999999999999999999999998887655
No 140
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.8e-38 Score=349.39 Aligned_cols=285 Identities=24% Similarity=0.333 Sum_probs=204.0
Q ss_pred HHHhcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCCcchHHHHHHHHHHHhc--CCCcceeEEeeeecccccC
Q 039533 622 YNATSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHGASRSFIAECKALKSI--RHRNLVKVLTACLGADYRG 699 (949)
Q Consensus 622 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l--~h~niv~~~~~~~~~~~~~ 699 (949)
....++|++.+.||+|+||.||+|++. ++.||||++.... ...+..|.+++... +||||+++++++.... ..
T Consensus 33 ~~~~~~y~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~---~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~-~~ 106 (337)
T 3mdy_A 33 RTIAKQIQMVKQIGKGRYGEVWMGKWR--GEKVAVKVFFTTE---EASWFRETEIYQTVLMRHENILGFIAADIKGT-GS 106 (337)
T ss_dssp TTHHHHCEEEEEEEEETTEEEEEEEET--TEEEEEEEEEGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEESC-GG
T ss_pred cccccceEEEeEeecCCCeEEEEEEEC--CceEEEEEEeccc---cchhhhHHHHHHHHhhcCCCeeeEEEEEccCC-CC
Confidence 344578999999999999999999986 8999999986432 34455566666555 8999999999986542 12
Q ss_pred CccceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCC-----CCCeEecCCCCCCeee
Q 039533 700 NDFKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDC-----QPVTAHCDLKPSNVLL 774 (949)
Q Consensus 700 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~-----~~~ivHrDlkp~NIll 774 (949)
....++||||+++|+|.++++ ...+++..+..++.|++.||+|||++. .++|+||||||+||++
T Consensus 107 ~~~~~lv~e~~~~g~L~~~l~-----------~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill 175 (337)
T 3mdy_A 107 WTQLYLITDYHENGSLYDYLK-----------STTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILV 175 (337)
T ss_dssp GCEEEEEECCCTTCBHHHHHH-----------HCCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEE
T ss_pred CCceEEEEeccCCCcHHHHhh-----------ccCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEE
Confidence 246899999999999999996 235899999999999999999999641 3389999999999999
Q ss_pred cCCCceEEeecccceecCCCCCcc--ccccccCccCccCccccCCCccCCc------cchHHHHHHHHHHHhCCCCCccc
Q 039533 775 DDYMTARVGDFGLARILSPDHTQT--SSFSVKGSLGYIAPEYGVGCEVSTN------GDVYSYGILLLELVIGKKPIDIM 846 (949)
Q Consensus 775 ~~~~~~kl~DfG~a~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~------sDiwSlGvvl~elltg~~Pf~~~ 846 (949)
+.++.+||+|||+++......... ......||+.|+|||++.+...+.+ +|||||||++|||+||..|+...
T Consensus 176 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~ 255 (337)
T 3mdy_A 176 KKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIV 255 (337)
T ss_dssp CTTSCEEECCCTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBC
T ss_pred CCCCCEEEEeCCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCccccc
Confidence 999999999999998765443321 1123469999999999887766554 99999999999999995554322
Q ss_pred cccCchhhhhccccCC-Cchhhhc-ccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHH
Q 039533 847 FEGDINLHNFGRKALP-DDVMDIV-DSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNV 924 (949)
Q Consensus 847 ~~~~~~~~~~~~~~~~-~~~~~~~-d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev 924 (949)
......+......... ....+.+ .....+.... .....+++..+.+++.+||+.||++|||+.||
T Consensus 256 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~l~~li~~~l~~dP~~Rps~~el 322 (337)
T 3mdy_A 256 EEYQLPYHDLVPSDPSYEDMREIVCIKKLRPSFPN-------------RWSSDECLRQMGKLMTECWAHNPASRLTALRV 322 (337)
T ss_dssp CCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCG-------------GGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHH
T ss_pred ccccccHhhhcCCCCchhhhHHHHhhhccCccccc-------------cchhhHHHHHHHHHHHHhhhhChhhCCCHHHH
Confidence 1111111000000000 0011111 0111111100 00112667889999999999999999999999
Q ss_pred HHHHHHhHHhhc
Q 039533 925 VHELQSIKNILL 936 (949)
Q Consensus 925 ~~~L~~i~~~~~ 936 (949)
++.|+++.++..
T Consensus 323 l~~L~~l~~~~~ 334 (337)
T 3mdy_A 323 KKTLAKMSESQD 334 (337)
T ss_dssp HHHHHHHHHTTT
T ss_pred HHHHHHHHhhcc
Confidence 999999987643
No 141
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00 E-value=2.6e-39 Score=359.59 Aligned_cols=269 Identities=17% Similarity=0.237 Sum_probs=201.4
Q ss_pred hcCCCCCCeeeeecCceEEEEEEcC---CCEEEEEEEEecCCCc-----------chHHHHHHHHHHHhcCCCcceeEEe
Q 039533 625 TSGFSSANLVGVGSFGSVYKGIIDE---GRTTIAVKVFNLQHHG-----------ASRSFIAECKALKSIRHRNLVKVLT 690 (949)
Q Consensus 625 ~~~y~~~~~lg~G~~g~Vy~~~~~~---~~~~vavK~~~~~~~~-----------~~~~~~~E~~~l~~l~h~niv~~~~ 690 (949)
.++|.+.+.||+|+||.||+|++.. ++..||||+....... ....+.+|+..++.++||||+++++
T Consensus 36 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~ 115 (345)
T 2v62_A 36 GNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYG 115 (345)
T ss_dssp SCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEE
T ss_pred CceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeec
Confidence 3578899999999999999999976 6788999998754321 1234678888999999999999999
Q ss_pred eeecccccCCccceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCC
Q 039533 691 ACLGADYRGNDFKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPS 770 (949)
Q Consensus 691 ~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~ 770 (949)
++.... .+....++||||+ +++|.+++.. ...+++.+++.++.|++.||+|||++ +|+||||||+
T Consensus 116 ~~~~~~-~~~~~~~lv~e~~-~~~L~~~l~~----------~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~ 180 (345)
T 2v62_A 116 SGLTEF-KGRSYRFMVMERL-GIDLQKISGQ----------NGTFKKSTVLQLGIRMLDVLEYIHEN---EYVHGDIKAA 180 (345)
T ss_dssp EEEEES-SSCEEEEEEEECE-EEEHHHHCBG----------GGBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGG
T ss_pred cccccc-CCCcEEEEEEecc-CCCHHHHHHh----------cCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCcCHH
Confidence 987532 3345789999999 9999999972 23689999999999999999999987 9999999999
Q ss_pred CeeecCCC--ceEEeecccceecCCCCCc-----cccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCC
Q 039533 771 NVLLDDYM--TARVGDFGLARILSPDHTQ-----TSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPI 843 (949)
Q Consensus 771 NIll~~~~--~~kl~DfG~a~~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf 843 (949)
||+++.++ .+||+|||+++.+...... .......||..|+|||++.+..++.++|||||||++|||++|+.||
T Consensus 181 NIll~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf 260 (345)
T 2v62_A 181 NLLLGYKNPDQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPW 260 (345)
T ss_dssp GEEEESSSTTSEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTT
T ss_pred HEEEccCCCCcEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCc
Confidence 99999877 9999999999876533211 1112456999999999999989999999999999999999999999
Q ss_pred ccccccCchhhhhcc---ccCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCC
Q 039533 844 DIMFEGDINLHNFGR---KALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTN 920 (949)
Q Consensus 844 ~~~~~~~~~~~~~~~---~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs 920 (949)
............... ...++...+... ....+..+.+++.+||+.||++|||
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------------~~~~~~~l~~li~~~l~~dp~~Rps 315 (345)
T 2v62_A 261 EQNLKDPVAVQTAKTNLLDELPQSVLKWAP-------------------------SGSSCCEIAQFLVCAHSLAYDEKPN 315 (345)
T ss_dssp GGGTTCHHHHHHHHHHHHHTTTHHHHHHSC-------------------------TTSCCHHHHHHHHHHHTCCTTCCCC
T ss_pred cccccccHHHHHHHHhhcccccHHHHhhcc-------------------------ccccHHHHHHHHHHHhhcCcccCCC
Confidence 643221111111000 000000000000 0033557899999999999999999
Q ss_pred HHHHHHHHHHhHH
Q 039533 921 MTNVVHELQSIKN 933 (949)
Q Consensus 921 ~~ev~~~L~~i~~ 933 (949)
++||++.|+++..
T Consensus 316 ~~~l~~~L~~~~~ 328 (345)
T 2v62_A 316 YQALKKILNPHGI 328 (345)
T ss_dssp HHHHHHHHCTTCC
T ss_pred HHHHHHHHhccCC
Confidence 9999999988654
No 142
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00 E-value=2.4e-39 Score=373.07 Aligned_cols=260 Identities=24% Similarity=0.387 Sum_probs=207.7
Q ss_pred hcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCCcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCccce
Q 039533 625 TSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFKA 704 (949)
Q Consensus 625 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 704 (949)
.++|.+.+.||+|+||.||+|.+. ++..||||+++... ...+.+.+|+.++++++||||+++++++.. ...+
T Consensus 187 ~~~~~~~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~------~~~~ 258 (454)
T 1qcf_A 187 RESLKLEKKLGAGQFGEVWMATYN-KHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVTK------EPIY 258 (454)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEET-TTEEEEEEEECTTS-BCHHHHHHHHHHHTTCCCTTBCCEEEEECS------SSCE
T ss_pred hHHeEEEEEcccCCceEEEEEEEC-CccEEEEEEecCCC-ccHHHHHHHHHHHhhCCCCCEeeEEEEEeC------CccE
Confidence 456888899999999999999997 57889999997543 346789999999999999999999998742 2579
Q ss_pred eEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEee
Q 039533 705 SVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVGD 784 (949)
Q Consensus 705 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~D 784 (949)
+||||+++|+|.+++... ....+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+|
T Consensus 259 lv~e~~~~g~L~~~l~~~--------~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~D 327 (454)
T 1qcf_A 259 IITEFMAKGSLLDFLKSD--------EGSKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIAD 327 (454)
T ss_dssp EEECCCTTCBHHHHHHSH--------HHHTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTCCEEECS
T ss_pred EEEeecCCCcHHHHHHhc--------cCCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCHHHEEECCCCcEEEee
Confidence 999999999999999621 123578899999999999999999988 899999999999999999999999
Q ss_pred cccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHh-CCCCCccccccCchhhhhccccCCC
Q 039533 785 FGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVI-GKKPIDIMFEGDINLHNFGRKALPD 863 (949)
Q Consensus 785 fG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~ 863 (949)
||+++....... .......++..|+|||++.+..++.++|||||||++|||+| |+.||......+ ....
T Consensus 328 FG~a~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~~--~~~~------- 397 (454)
T 1qcf_A 328 FGLARVIEDNEY-TAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPE--VIRA------- 397 (454)
T ss_dssp TTGGGGBCCHHH-HTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHH--HHHH-------
T ss_pred CCCceEcCCCce-eccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHHH--HHHH-------
Confidence 999987643221 11123346788999999988889999999999999999999 999996432111 0000
Q ss_pred chhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHHhHHhhc
Q 039533 864 DVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHELQSIKNILL 936 (949)
Q Consensus 864 ~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~~~~~ 936 (949)
+......+. ...++..+.+++.+||+.||++|||+++|++.|+++.....
T Consensus 398 ----i~~~~~~~~-------------------~~~~~~~l~~li~~cl~~dp~~RPt~~~i~~~L~~~~~~~~ 447 (454)
T 1qcf_A 398 ----LERGYRMPR-------------------PENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFYTATE 447 (454)
T ss_dssp ----HHHTCCCCC-------------------CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSSSSC
T ss_pred ----HHcCCCCCC-------------------CCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHHhccc
Confidence 000000000 11345678899999999999999999999999999865543
No 143
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=5.3e-39 Score=343.69 Aligned_cols=258 Identities=25% Similarity=0.378 Sum_probs=206.9
Q ss_pred hcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCCcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCccce
Q 039533 625 TSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFKA 704 (949)
Q Consensus 625 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 704 (949)
.++|++.+.||+|+||.||+|.+. +++.||+|+++.... ..+.+.+|++++++++||||+++++++...+ ..+
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vaiK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-----~~~ 79 (267)
T 3t9t_A 7 PSELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQA-----PIC 79 (267)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECTTTB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSS-----SCE
T ss_pred hhheeeeeEecCCCceeEEEEEec-CCCeEEEEEccccCC-CHHHHHHHHHHHHhCCCCCEeeEEEEEccCC-----CeE
Confidence 357888999999999999999997 678999999975443 3467999999999999999999999976543 789
Q ss_pred eEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEee
Q 039533 705 SVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVGD 784 (949)
Q Consensus 705 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~D 784 (949)
+||||+++++|.+++.. ....+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|
T Consensus 80 lv~e~~~~~~L~~~~~~---------~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~d 147 (267)
T 3t9t_A 80 LVTEFMEHGCLSDYLRT---------QRGLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSD 147 (267)
T ss_dssp EEECCCTTCBHHHHHHH---------TTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECGGGCEEECC
T ss_pred EEEeCCCCCcHHHHHhh---------CcccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEECCCCCEEEcc
Confidence 99999999999999962 234588999999999999999999987 899999999999999999999999
Q ss_pred cccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHh-CCCCCccccccCchhhhhccccCCC
Q 039533 785 FGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVI-GKKPIDIMFEGDINLHNFGRKALPD 863 (949)
Q Consensus 785 fG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~ 863 (949)
||.++....... .......++..|+|||++.+..++.++||||||+++|||++ |+.||....... ....
T Consensus 148 fg~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~--~~~~------- 217 (267)
T 3t9t_A 148 FGMTRFVLDDQY-TSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE--VVED------- 217 (267)
T ss_dssp TTGGGGBCCHHH-HSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH--HHHH-------
T ss_pred cccccccccccc-cccccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCHHH--HHHH-------
Confidence 999987643221 11123447789999999988889999999999999999999 899986432110 0000
Q ss_pred chhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHHhHHh
Q 039533 864 DVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHELQSIKNI 934 (949)
Q Consensus 864 ~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~~~ 934 (949)
+........+ ...+..+.+++.+|++.||++|||++|+++.|+++.++
T Consensus 218 ----i~~~~~~~~~-------------------~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~ 265 (267)
T 3t9t_A 218 ----ISTGFRLYKP-------------------RLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAES 265 (267)
T ss_dssp ----HHTTCCCCCC-------------------TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred ----HhcCCcCCCC-------------------ccCcHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence 0000000000 01234678999999999999999999999999999764
No 144
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00 E-value=4.6e-39 Score=353.54 Aligned_cols=270 Identities=18% Similarity=0.203 Sum_probs=209.0
Q ss_pred hcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCCcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCccce
Q 039533 625 TSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFKA 704 (949)
Q Consensus 625 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 704 (949)
.++|++.+.||+|+||.||+|++..+++.||||++........+.+.+|++++++++||||+++++++.... ......+
T Consensus 28 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~~~~~~ 106 (317)
T 2buj_A 28 NKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRER-GAKHEAW 106 (317)
T ss_dssp TEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEE-TTEEEEE
T ss_pred CeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEecc-CCCceeE
Confidence 357899999999999999999998899999999997665556678999999999999999999999986322 2334678
Q ss_pred eEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEee
Q 039533 705 SVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVGD 784 (949)
Q Consensus 705 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~D 784 (949)
+||||+++|+|.+++.... .....+++.+++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|
T Consensus 107 lv~e~~~~~~L~~~l~~~~------~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~d 177 (317)
T 2buj_A 107 LLLPFFKRGTLWNEIERLK------DKGNFLTEDQILWLLLGICRGLEAIHAK---GYAHRDLKPTNILLGDEGQPVLMD 177 (317)
T ss_dssp EEEECCTTCBHHHHHHHHH------TTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECC
T ss_pred EEEEeCCCCcHHHHHHHHH------hcCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEcCCCCEEEEe
Confidence 9999999999999986311 1245689999999999999999999988 999999999999999999999999
Q ss_pred cccceecCCCCCcc-------ccccccCccCccCccccCCCc---cCCccchHHHHHHHHHHHhCCCCCccccccCchhh
Q 039533 785 FGLARILSPDHTQT-------SSFSVKGSLGYIAPEYGVGCE---VSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLH 854 (949)
Q Consensus 785 fG~a~~~~~~~~~~-------~~~~~~gt~~y~aPE~~~~~~---~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~ 854 (949)
||.+.......... ......||+.|+|||++.+.. ++.++|||||||++|||++|+.||+..........
T Consensus 178 fg~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~ 257 (317)
T 2buj_A 178 LGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVA 257 (317)
T ss_dssp CSSCEESCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTSCHH
T ss_pred cCcchhcccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccchhh
Confidence 99987654321110 011234799999999987653 68999999999999999999999964322211111
Q ss_pred hhccccCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHHhHHh
Q 039533 855 NFGRKALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHELQSIKNI 934 (949)
Q Consensus 855 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~~~ 934 (949)
... ....... .....+..+.+++.+||+.||++|||++|+++.|+++...
T Consensus 258 ~~~------------~~~~~~~------------------~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~ 307 (317)
T 2buj_A 258 LAV------------QNQLSIP------------------QSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQPP 307 (317)
T ss_dssp HHH------------HCC--CC------------------CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTCCC
T ss_pred HHh------------hccCCCC------------------ccccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhhhcCCC
Confidence 110 0000000 0012345688999999999999999999999999987543
No 145
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00 E-value=7.8e-39 Score=354.97 Aligned_cols=246 Identities=20% Similarity=0.215 Sum_probs=201.3
Q ss_pred hcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCC---CcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCc
Q 039533 625 TSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQH---HGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGND 701 (949)
Q Consensus 625 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 701 (949)
.++|++.+.||+|+||.||+|++..+++.||||+++... ....+.+.+|+.++++++||||+++++++.+.+
T Consensus 40 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~----- 114 (350)
T 1rdq_E 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS----- 114 (350)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSS-----
T ss_pred HHHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCC-----
Confidence 367899999999999999999999899999999997432 233467889999999999999999999976544
Q ss_pred cceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceE
Q 039533 702 FKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTAR 781 (949)
Q Consensus 702 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~k 781 (949)
..++||||+++|+|.+++. ....+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+|
T Consensus 115 ~~~lv~e~~~gg~L~~~l~----------~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~k 181 (350)
T 1rdq_E 115 NLYMVMEYVAGGEMFSHLR----------RIGRFSEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQ 181 (350)
T ss_dssp EEEEEEECCTTCBHHHHHH----------HHCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEE
T ss_pred EEEEEEcCCCCCcHHHHHH----------HcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCccceEEECCCCCEE
Confidence 7899999999999999996 234589999999999999999999987 999999999999999999999
Q ss_pred EeecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhccccC
Q 039533 782 VGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKAL 861 (949)
Q Consensus 782 l~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~ 861 (949)
|+|||+++...... ....||+.|+|||++.+..++.++|||||||++|||++|+.||....... .
T Consensus 182 L~DFg~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~--~-------- 246 (350)
T 1rdq_E 182 VTDFGFAKRVKGRT-----WTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ--I-------- 246 (350)
T ss_dssp ECCCTTCEECSSCB-----CCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH--H--------
T ss_pred EcccccceeccCCc-----ccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCHHH--H--------
Confidence 99999998765432 13459999999999999999999999999999999999999996331110 0
Q ss_pred CCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCC-----HHHHHH
Q 039533 862 PDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTN-----MTNVVH 926 (949)
Q Consensus 862 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs-----~~ev~~ 926 (949)
...+...... .+ ...+..+.+++.+|++.||++||+ ++|+++
T Consensus 247 ---~~~i~~~~~~-~p-------------------~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~ 293 (350)
T 1rdq_E 247 ---YEKIVSGKVR-FP-------------------SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN 293 (350)
T ss_dssp ---HHHHHHCCCC-CC-------------------TTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHT
T ss_pred ---HHHHHcCCCC-CC-------------------CCCCHHHHHHHHHHhhcCHHhccCCccCCHHHHHh
Confidence 0011110000 00 022446789999999999999998 777764
No 146
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00 E-value=7.2e-39 Score=355.13 Aligned_cols=250 Identities=22% Similarity=0.248 Sum_probs=200.1
Q ss_pred HhcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCC---CcchHHHHHHHHHHHhc-CCCcceeEEeeeecccccC
Q 039533 624 ATSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQH---HGASRSFIAECKALKSI-RHRNLVKVLTACLGADYRG 699 (949)
Q Consensus 624 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~ 699 (949)
..++|++.+.||+|+||.||+|++..+++.||||+++... ....+.+..|..++..+ +||+|+++++++...+
T Consensus 18 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~--- 94 (353)
T 2i0e_A 18 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMD--- 94 (353)
T ss_dssp -CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSS---
T ss_pred chHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCC---
Confidence 4578999999999999999999999889999999997532 23456788999999988 7999999999976544
Q ss_pred CccceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCc
Q 039533 700 NDFKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMT 779 (949)
Q Consensus 700 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~ 779 (949)
..++||||+++|+|.+++. ....+++..++.++.|++.||+|||++ +|+||||||+||+++.+++
T Consensus 95 --~~~lv~E~~~gg~L~~~l~----------~~~~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~ 159 (353)
T 2i0e_A 95 --RLYFVMEYVNGGDLMYHIQ----------QVGRFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGH 159 (353)
T ss_dssp --EEEEEEECCCSCBHHHHHH----------HHSSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSC
T ss_pred --EEEEEEeCCCCCcHHHHHH----------hcCCCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEEcCCCc
Confidence 7899999999999999996 234589999999999999999999987 9999999999999999999
Q ss_pred eEEeecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhccc
Q 039533 780 ARVGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRK 859 (949)
Q Consensus 780 ~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~ 859 (949)
+||+|||+++........ .....||+.|+|||++.+..++.++|||||||++|||++|+.||....... .
T Consensus 160 vkL~DFG~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~--~------ 229 (353)
T 2i0e_A 160 IKIADFGMCKENIWDGVT--TKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDE--L------ 229 (353)
T ss_dssp EEECCCTTCBCCCCTTCC--BCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHH--H------
T ss_pred EEEEeCCcccccccCCcc--cccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCHHH--H------
Confidence 999999999864332221 224569999999999999999999999999999999999999996331110 0
Q ss_pred cCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCC-----HHHHHH
Q 039533 860 ALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTN-----MTNVVH 926 (949)
Q Consensus 860 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs-----~~ev~~ 926 (949)
...+...... .+ ...+..+.+++.+|++.||++||+ ++|+++
T Consensus 230 -----~~~i~~~~~~-~p-------------------~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~ 276 (353)
T 2i0e_A 230 -----FQSIMEHNVA-YP-------------------KSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKE 276 (353)
T ss_dssp -----HHHHHHCCCC-CC-------------------TTSCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHT
T ss_pred -----HHHHHhCCCC-CC-------------------CCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhc
Confidence 0011111100 00 022456789999999999999996 456553
No 147
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00 E-value=1.3e-38 Score=350.36 Aligned_cols=251 Identities=22% Similarity=0.243 Sum_probs=179.1
Q ss_pred CCeeeeecCceEEEEEEcCCCEEEEEEEEecCCCcchHHHHHHHHHHHhcC-CCcceeEEeeeecccccCCccceeEeee
Q 039533 631 ANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHGASRSFIAECKALKSIR-HRNLVKVLTACLGADYRGNDFKASVYEF 709 (949)
Q Consensus 631 ~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~~~~~lv~e~ 709 (949)
.+.||+|+||.||+|.+..+++.||||++... ....+.+|+.+++++. ||||+++++++.+.. ..++||||
T Consensus 16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~-----~~~lv~e~ 87 (325)
T 3kn6_A 16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKR---MEANTQKEITALKLCEGHPNIVKLHEVFHDQL-----HTFLVMEL 87 (325)
T ss_dssp SCCSEEETTEEEEEEEETTTCCEEEEEEEEGG---GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSS-----EEEEEECC
T ss_pred CCccccCCCeEEEEEEECCCCCEEEEEEEChh---hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCC-----EEEEEEEc
Confidence 47899999999999999989999999998643 3467889999999997 999999999976544 78999999
Q ss_pred ccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCC---ceEEeecc
Q 039533 710 MHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYM---TARVGDFG 786 (949)
Q Consensus 710 ~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~---~~kl~DfG 786 (949)
+++|+|.+++. ....+++.++..++.|++.||+|||++ +|+||||||+||+++.++ .+||+|||
T Consensus 88 ~~~~~L~~~l~----------~~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg 154 (325)
T 3kn6_A 88 LNGGELFERIK----------KKKHFSETEASYIMRKLVSAVSHMHDV---GVVHRDLKPENLLFTDENDNLEIKIIDFG 154 (325)
T ss_dssp CCSCBHHHHHH----------HCSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEC----CEEEECCCT
T ss_pred cCCCcHHHHHH----------hcCCCCHHHHHHHHHHHHHHHHHHHHC---CCeecCCCHHHEEEecCCCcccEEEeccc
Confidence 99999999996 235689999999999999999999987 999999999999997665 89999999
Q ss_pred cceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhccccCCCchh
Q 039533 787 LARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKALPDDVM 866 (949)
Q Consensus 787 ~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~ 866 (949)
+++......... ....||+.|+|||++.+..++.++|||||||++|||++|+.||........ .....
T Consensus 155 ~a~~~~~~~~~~--~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~----------~~~~~ 222 (325)
T 3kn6_A 155 FARLKPPDNQPL--KTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLT----------CTSAV 222 (325)
T ss_dssp TCEECCC------------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-----------------CCCHH
T ss_pred cceecCCCCCcc--cccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccc----------cccHH
Confidence 998765443322 134589999999999999999999999999999999999999964322100 00001
Q ss_pred hhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 039533 867 DIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVH 926 (949)
Q Consensus 867 ~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 926 (949)
++++....... ....+.....+..+.+++.+|++.||++|||++|+++
T Consensus 223 ~~~~~i~~~~~------------~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~ 270 (325)
T 3kn6_A 223 EIMKKIKKGDF------------SFEGEAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRY 270 (325)
T ss_dssp HHHHHHTTTCC------------CCCSHHHHTSCHHHHHHHHHHHCCCTTTCCCTTTSTT
T ss_pred HHHHHHHcCCC------------CCCcccccCCCHHHHHHHHHHCCCChhHCCCHHHHhc
Confidence 11110000000 0000111234567899999999999999999999863
No 148
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00 E-value=7.8e-39 Score=343.16 Aligned_cols=257 Identities=24% Similarity=0.345 Sum_probs=202.7
Q ss_pred hcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCC--cchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCcc
Q 039533 625 TSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHH--GASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDF 702 (949)
Q Consensus 625 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 702 (949)
.++|.+.+.||+|+||.||+|++. ++.||||+++.... ...+.+.+|+.++++++||||+++++++...+ ...
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~--~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~---~~~ 83 (271)
T 3kmu_A 9 FKQLNFLTKLNENHSGELWKGRWQ--GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPP---APH 83 (271)
T ss_dssp GGGCEEEEEEEEETTEEEEEEEET--TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTT---SSS
T ss_pred HHHhHHHHHhcCCCcceEEEEEEC--CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCC---CCC
Confidence 357899999999999999999986 78999999975532 33467899999999999999999999986542 247
Q ss_pred ceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEE
Q 039533 703 KASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARV 782 (949)
Q Consensus 703 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl 782 (949)
.++||||+++|+|.+++... ....+++.++..++.|++.||+|||++ .++|+||||||+||+++.++.++|
T Consensus 84 ~~lv~e~~~~~~L~~~l~~~--------~~~~~~~~~~~~i~~qi~~~l~~lH~~-~~~i~H~dikp~Nil~~~~~~~~l 154 (271)
T 3kmu_A 84 PTLITHWMPYGSLYNVLHEG--------TNFVVDQSQAVKFALDMARGMAFLHTL-EPLIPRHALNSRSVMIDEDMTARI 154 (271)
T ss_dssp CEEEEECCTTCBHHHHHHSC--------SSCCCCHHHHHHHHHHHHHHHHHHTTS-SSCCTTCCCSGGGEEECTTSCEEE
T ss_pred eEeeecccCCCcHHHHHhhc--------ccCCCCHHHHHHHHHHHHHHHHHHhcC-CCceecCCCccceEEEcCCcceeE
Confidence 89999999999999999731 223589999999999999999999977 223999999999999999999999
Q ss_pred eecccceecCCCCCccccccccCccCccCccccCCCccCC---ccchHHHHHHHHHHHhCCCCCccccccCchhhhhccc
Q 039533 783 GDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVST---NGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRK 859 (949)
Q Consensus 783 ~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~---~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~ 859 (949)
+|||++...... ...||+.|+|||++.+..++. ++|||||||++|||++|+.||..........
T Consensus 155 ~~~~~~~~~~~~-------~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~------ 221 (271)
T 3kmu_A 155 SMADVKFSFQSP-------GRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIGM------ 221 (271)
T ss_dssp EGGGSCCTTSCT-------TCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHHHHH------
T ss_pred Eeccceeeeccc-------CccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChHHHHH------
Confidence 999987643221 235899999999988766554 7999999999999999999996432211100
Q ss_pred cCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHHhHH
Q 039533 860 ALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHELQSIKN 933 (949)
Q Consensus 860 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~~ 933 (949)
........... ...++..+.+++.+||+.||++|||++|+++.|+++.+
T Consensus 222 -------~~~~~~~~~~~------------------~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~L~~l~~ 270 (271)
T 3kmu_A 222 -------KVALEGLRPTI------------------PPGISPHVSKLMKICMNEDPAKRPKFDMIVPILEKMQD 270 (271)
T ss_dssp -------HHHHSCCCCCC------------------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHCC
T ss_pred -------HHHhcCCCCCC------------------CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhc
Confidence 00000000000 01234568899999999999999999999999999864
No 149
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00 E-value=4.2e-39 Score=355.06 Aligned_cols=275 Identities=22% Similarity=0.344 Sum_probs=213.0
Q ss_pred cCCCCCCeeeeecCceEEEEEE----cCCCEEEEEEEEecCCCcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCc
Q 039533 626 SGFSSANLVGVGSFGSVYKGII----DEGRTTIAVKVFNLQHHGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGND 701 (949)
Q Consensus 626 ~~y~~~~~lg~G~~g~Vy~~~~----~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 701 (949)
++|++.+.||+|+||.||+|+. ..+++.||||++........+.+.+|++++++++||||+++++++...+ ..
T Consensus 41 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~---~~ 117 (326)
T 2w1i_A 41 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAG---RR 117 (326)
T ss_dssp GGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC-------
T ss_pred HHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecC---CC
Confidence 5688899999999999999994 4578999999998766666678999999999999999999999876432 33
Q ss_pred cceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceE
Q 039533 702 FKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTAR 781 (949)
Q Consensus 702 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~k 781 (949)
..++||||+++++|.+++.. ....+++.+++.++.|++.||+|||++ +|+||||||+||+++.++.+|
T Consensus 118 ~~~lv~e~~~~~~L~~~l~~---------~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~~~~k 185 (326)
T 2w1i_A 118 NLKLIMEYLPYGSLRDYLQK---------HKERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVK 185 (326)
T ss_dssp CCEEEECCCTTCBHHHHHHH---------STTSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEE
T ss_pred ceEEEEECCCCCCHHHHHHh---------cccCCCHHHHHHHHHHHHHHHHHHHhC---CEeccCCCcceEEEcCCCcEE
Confidence 67999999999999999962 234589999999999999999999987 999999999999999999999
Q ss_pred EeecccceecCCCCCcc-ccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhcccc
Q 039533 782 VGDFGLARILSPDHTQT-SSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKA 860 (949)
Q Consensus 782 l~DfG~a~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~ 860 (949)
|+|||+++......... ......++..|+|||++.+..++.++||||||+++|||+||..||...... +.......
T Consensus 186 L~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~---~~~~~~~~ 262 (326)
T 2w1i_A 186 IGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAE---FMRMIGND 262 (326)
T ss_dssp ECCCTTCEECCSSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHH---HHHHHCTT
T ss_pred EecCcchhhccccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHH---HHHhhccc
Confidence 99999999876554321 112334778899999998888999999999999999999999998532111 00000000
Q ss_pred CCC-----chhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHHhHHhh
Q 039533 861 LPD-----DVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHELQSIKNIL 935 (949)
Q Consensus 861 ~~~-----~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~~~~ 935 (949)
... .+.+.+.... +.+....++..+.+++.+||+.||++|||+.||++.|+++++.+
T Consensus 263 ~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l~~~l 324 (326)
T 2w1i_A 263 KQGQMIVFHLIELLKNNG------------------RLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDQM 324 (326)
T ss_dssp CCTHHHHHHHHHHHHTTC------------------CCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred cchhhhHHHHHHHhhcCC------------------CCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHh
Confidence 000 0011111100 00011234567899999999999999999999999999998876
Q ss_pred c
Q 039533 936 L 936 (949)
Q Consensus 936 ~ 936 (949)
.
T Consensus 325 ~ 325 (326)
T 2w1i_A 325 A 325 (326)
T ss_dssp H
T ss_pred c
Confidence 4
No 150
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00 E-value=1.6e-38 Score=365.04 Aligned_cols=248 Identities=26% Similarity=0.352 Sum_probs=202.4
Q ss_pred hcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCC---CcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCc
Q 039533 625 TSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQH---HGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGND 701 (949)
Q Consensus 625 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 701 (949)
.++|.+.+.||+|+||.||+|++..+++.||||+++... ......+.+|+.++++++||||+++++++...+
T Consensus 15 ~~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~----- 89 (476)
T 2y94_A 15 IGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPS----- 89 (476)
T ss_dssp ETTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSS-----
T ss_pred ecCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECC-----
Confidence 367899999999999999999999899999999997432 223467899999999999999999999976544
Q ss_pred cceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceE
Q 039533 702 FKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTAR 781 (949)
Q Consensus 702 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~k 781 (949)
..++||||+++|+|.+++. ....+++.++..++.|++.||+|||++ +|+||||||+||+++.++.+|
T Consensus 90 ~~~lv~E~~~gg~L~~~l~----------~~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDLkp~NIll~~~~~vk 156 (476)
T 2y94_A 90 DIFMVMEYVSGGELFDYIC----------KNGRLDEKESRRLFQQILSGVDYCHRH---MVVHRDLKPENVLLDAHMNAK 156 (476)
T ss_dssp EEEEEEECCSSEEHHHHTT----------SSSSCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEECTTCCEE
T ss_pred EEEEEEeCCCCCcHHHHHH----------hcCCCCHHHHHHHHHHHHHHHHHHHHC---CCCcccccHHHEEEecCCCeE
Confidence 7899999999999999996 234689999999999999999999977 999999999999999999999
Q ss_pred EeecccceecCCCCCccccccccCccCccCccccCCCcc-CCccchHHHHHHHHHHHhCCCCCccccccCchhhhhcccc
Q 039533 782 VGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEV-STNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKA 860 (949)
Q Consensus 782 l~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~ 860 (949)
|+|||+++......... ...||+.|+|||++.+..+ +.++||||+||++|||++|+.||+..... ..
T Consensus 157 L~DFG~a~~~~~~~~~~---~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~--~~------- 224 (476)
T 2y94_A 157 IADFGLSNMMSDGEFLR---TSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVP--TL------- 224 (476)
T ss_dssp ECCCSSCEECCTTCCBC---CCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSH--HH-------
T ss_pred EEeccchhhcccccccc---ccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCHH--HH-------
Confidence 99999999876543222 3459999999999988765 68999999999999999999999643111 00
Q ss_pred CCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 039533 861 LPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVH 926 (949)
Q Consensus 861 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 926 (949)
...+.+... ..+ ...+..+.+++.+|++.||++|||++|+++
T Consensus 225 ----~~~i~~~~~-~~p-------------------~~~s~~~~~Li~~~L~~dP~~Rpt~~eil~ 266 (476)
T 2y94_A 225 ----FKKICDGIF-YTP-------------------QYLNPSVISLLKHMLQVDPMKRATIKDIRE 266 (476)
T ss_dssp ----HHHHHTTCC-CCC-------------------TTCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred ----HHHHhcCCc-CCC-------------------ccCCHHHHHHHHHHcCCCchhCcCHHHHHh
Confidence 011111110 000 012345788999999999999999999987
No 151
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00 E-value=8.5e-39 Score=346.08 Aligned_cols=268 Identities=22% Similarity=0.289 Sum_probs=196.7
Q ss_pred cCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCC--cchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCccc
Q 039533 626 SGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHH--GASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFK 703 (949)
Q Consensus 626 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 703 (949)
++|++.+.||+|+||.||+|++. +++.||+|+++.... ...+.+.+|++++++++||||+++++++...+ ..
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~-~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-----~~ 75 (288)
T 1ob3_A 2 EKYHGLEKIGEGTYGVVYKAQNN-YGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKK-----RL 75 (288)
T ss_dssp CSEEEEEEEEEETTEEEEEEEET-TSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSS-----CE
T ss_pred ccchhhhhcccCCCEEEEEEEcC-CCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCC-----eE
Confidence 57889999999999999999984 789999999975432 23467889999999999999999999976544 78
Q ss_pred eeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEe
Q 039533 704 ASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVG 783 (949)
Q Consensus 704 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~ 783 (949)
++||||+++ +|.+++.. ....+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+
T Consensus 76 ~lv~e~~~~-~l~~~~~~---------~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~ 142 (288)
T 1ob3_A 76 VLVFEHLDQ-DLKKLLDV---------CEGGLESVTAKSFLLQLLNGIAYCHDR---RVLHRDLKPQNLLINREGELKIA 142 (288)
T ss_dssp EEEEECCSE-EHHHHHHT---------STTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEEC
T ss_pred EEEEEecCC-CHHHHHHh---------cccCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEe
Confidence 999999985 99998862 234588999999999999999999987 99999999999999999999999
Q ss_pred ecccceecCCCCCccccccccCccCccCccccCCC-ccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhcc---c
Q 039533 784 DFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGC-EVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGR---K 859 (949)
Q Consensus 784 DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~---~ 859 (949)
|||+++......... ....||+.|+|||++.+. .++.++||||+||++|||++|+.||......+. ...... .
T Consensus 143 Dfg~~~~~~~~~~~~--~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~-~~~~~~~~~~ 219 (288)
T 1ob3_A 143 DFGLARAFGIPVRKY--THEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQ-LMRIFRILGT 219 (288)
T ss_dssp CTTHHHHHCC-----------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH-HHHHHHHHCC
T ss_pred ECccccccCcccccc--ccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHHHCC
Confidence 999998765432211 134589999999998764 589999999999999999999999965422111 111100 0
Q ss_pred cCCCchhhh-----cccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 039533 860 ALPDDVMDI-----VDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVH 926 (949)
Q Consensus 860 ~~~~~~~~~-----~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 926 (949)
......... .++...... +..........+..+.+++.+|++.||++|||++|+++
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 280 (288)
T 1ob3_A 220 PNSKNWPNVTELPKYDPNFTVYE-----------PLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE 280 (288)
T ss_dssp CCTTTSTTGGGSTTCCTTCCCCC-----------CCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred CChhhchhhhccccccccccccc-----------CccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 000000000 000000000 00000001123456789999999999999999999875
No 152
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00 E-value=1.3e-38 Score=360.40 Aligned_cols=283 Identities=18% Similarity=0.202 Sum_probs=203.8
Q ss_pred HhcCCCCCCeeeee--cCceEEEEEEcCCCEEEEEEEEecCCC--cchHHHHHHHHHHHhcCCCcceeEEeeeecccccC
Q 039533 624 ATSGFSSANLVGVG--SFGSVYKGIIDEGRTTIAVKVFNLQHH--GASRSFIAECKALKSIRHRNLVKVLTACLGADYRG 699 (949)
Q Consensus 624 ~~~~y~~~~~lg~G--~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 699 (949)
..++|++.+.||+| +||.||+|++..+++.||||+++.... ...+.+.+|+.++++++||||+++++++...+
T Consensus 23 ~~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~--- 99 (389)
T 3gni_B 23 EGGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADN--- 99 (389)
T ss_dssp CGGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETT---
T ss_pred CCCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECC---
Confidence 35679999999999 999999999998999999999975432 23467888999999999999999999986544
Q ss_pred CccceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCc
Q 039533 700 NDFKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMT 779 (949)
Q Consensus 700 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~ 779 (949)
..++||||+++|+|.+++... ....+++..+..++.|++.||+|||++ +|+||||||+||+++.++.
T Consensus 100 --~~~lv~e~~~~~~L~~~l~~~--------~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~ 166 (389)
T 3gni_B 100 --ELWVVTSFMAYGSAKDLICTH--------FMDGMNELAIAYILQGVLKALDYIHHM---GYVHRSVKASHILISVDGK 166 (389)
T ss_dssp --EEEEEEECCTTCBHHHHHHHT--------CTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCC
T ss_pred --EEEEEEEccCCCCHHHHHhhh--------cccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCC
Confidence 789999999999999999621 124589999999999999999999988 8999999999999999999
Q ss_pred eEEeecccceecCCCCC-----ccccccccCccCccCccccCC--CccCCccchHHHHHHHHHHHhCCCCCccccccCch
Q 039533 780 ARVGDFGLARILSPDHT-----QTSSFSVKGSLGYIAPEYGVG--CEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDIN 852 (949)
Q Consensus 780 ~kl~DfG~a~~~~~~~~-----~~~~~~~~gt~~y~aPE~~~~--~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~ 852 (949)
+||+|||.+........ ........||..|+|||++.+ ..++.++|||||||++|||++|+.||.........
T Consensus 167 ~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~ 246 (389)
T 3gni_B 167 VYLSGLRSNLSMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQML 246 (389)
T ss_dssp EEECCGGGCEECEETTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHH
T ss_pred EEEcccccceeeccccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHH
Confidence 99999999875432211 111112458999999999887 57899999999999999999999999654322211
Q ss_pred hhhhccccCCCchhhhcccCCCC---------------Cchhhhhhhc---hhhhhhhhhhHHHHHHHHHHHhhccccCC
Q 039533 853 LHNFGRKALPDDVMDIVDSSLLP---------------DDEDLILTGN---QRQKQARINSIIECLISMVRIGVACSMEL 914 (949)
Q Consensus 853 ~~~~~~~~~~~~~~~~~d~~l~~---------------~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~l~~~cl~~d 914 (949)
. .......+ .+.+....+ ...+...... ........+.....+..+.+++.+||+.|
T Consensus 247 ~-~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~d 321 (389)
T 3gni_B 247 L-EKLNGTVP----CLLDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRN 321 (389)
T ss_dssp H-HC------------------------------------------------------------CCHHHHHHHHHHTCSC
T ss_pred H-HHhcCCCC----ccccccccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcC
Confidence 1 11111000 000000000 0000000000 00000001112334567899999999999
Q ss_pred CCCCCCHHHHHHH
Q 039533 915 PQDRTNMTNVVHE 927 (949)
Q Consensus 915 P~~RPs~~ev~~~ 927 (949)
|++|||++|+++.
T Consensus 322 P~~Rpta~ell~h 334 (389)
T 3gni_B 322 PDARPSASTLLNH 334 (389)
T ss_dssp TTTSCCHHHHTTS
T ss_pred cccCCCHHHHhcC
Confidence 9999999999853
No 153
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00 E-value=1.2e-38 Score=349.05 Aligned_cols=270 Identities=21% Similarity=0.270 Sum_probs=200.6
Q ss_pred hcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCC---CcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCc
Q 039533 625 TSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQH---HGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGND 701 (949)
Q Consensus 625 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 701 (949)
.++|++.+.||+|+||.||+|.+..+++.||||+++... ......+.+|+.++++++||||+++++++...+
T Consensus 31 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~----- 105 (310)
T 2wqm_A 31 LANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDN----- 105 (310)
T ss_dssp GGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETT-----
T ss_pred ccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCC-----
Confidence 357899999999999999999998889999999997532 223467889999999999999999999987544
Q ss_pred cceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceE
Q 039533 702 FKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTAR 781 (949)
Q Consensus 702 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~k 781 (949)
..++||||+++++|.+++... ......+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+|
T Consensus 106 ~~~lv~e~~~~~~L~~~l~~~------~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIl~~~~~~~k 176 (310)
T 2wqm_A 106 ELNIVLELADAGDLSRMIKHF------KKQKRLIPERTVWKYFVQLCSALEHMHSR---RVMHRDIKPANVFITATGVVK 176 (310)
T ss_dssp EEEEEEECCCSCBHHHHHHHH------HHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEE
T ss_pred cEEEEEecCCCCCHHHHHHHh------cccccCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCcHHHEEEcCCCCEE
Confidence 789999999999999998621 11235689999999999999999999987 999999999999999999999
Q ss_pred EeecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhccccC
Q 039533 782 VGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKAL 861 (949)
Q Consensus 782 l~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~ 861 (949)
|+|||+++......... ....|+..|+|||++.+..++.++||||||+++|||++|+.||..............
T Consensus 177 l~Dfg~~~~~~~~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~---- 250 (310)
T 2wqm_A 177 LGDLGLGRFFSSKTTAA--HSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKI---- 250 (310)
T ss_dssp ECCC--------------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CCHHHHHHHH----
T ss_pred EEeccceeeecCCCccc--cccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchhHHHHHHHh----
Confidence 99999998765433221 134589999999999998999999999999999999999999853221111111000
Q ss_pred CCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHHhHHhhccCC
Q 039533 862 PDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHELQSIKNILLGVE 939 (949)
Q Consensus 862 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~~~~~~~~ 939 (949)
.......... ...+..+.+++.+||+.||++|||++||++.|++++.....+.
T Consensus 251 -------~~~~~~~~~~------------------~~~~~~l~~li~~~l~~dp~~Rps~~~il~~l~~l~~~~~~~~ 303 (310)
T 2wqm_A 251 -------EQCDYPPLPS------------------DHYSEELRQLVNMCINPDPEKRPDVTYVYDVAKRMHACTASSL 303 (310)
T ss_dssp -------HTTCSCCCCT------------------TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC---
T ss_pred -------hcccCCCCcc------------------cccCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhhhhhh
Confidence 0000000000 1234568899999999999999999999999999988866553
No 154
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00 E-value=1.3e-38 Score=346.57 Aligned_cols=264 Identities=25% Similarity=0.399 Sum_probs=203.5
Q ss_pred cCCCCCCeeeeecCceEEEEEEcCC---CEEEEEEEEecCCC-cchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCc
Q 039533 626 SGFSSANLVGVGSFGSVYKGIIDEG---RTTIAVKVFNLQHH-GASRSFIAECKALKSIRHRNLVKVLTACLGADYRGND 701 (949)
Q Consensus 626 ~~y~~~~~lg~G~~g~Vy~~~~~~~---~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 701 (949)
.+|++.+.||+|+||.||+|++..+ ...||+|++..... ...+.+.+|+.++++++||||+++++++... +.
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~----~~ 100 (298)
T 3f66_A 25 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRS----EG 100 (298)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCS----SS
T ss_pred eehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcC----CC
Confidence 4578889999999999999997533 34689999875332 3346789999999999999999999986432 34
Q ss_pred cceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceE
Q 039533 702 FKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTAR 781 (949)
Q Consensus 702 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~k 781 (949)
..++||||+++|+|.+++.. ....+++.++..++.|++.||+|||++ +|+||||||+||+++.++.+|
T Consensus 101 ~~~~v~e~~~~~~L~~~l~~---------~~~~~~~~~~~~i~~ql~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~k 168 (298)
T 3f66_A 101 SPLVVLPYMKHGDLRNFIRN---------ETHNPTVKDLIGFGLQVAKGMKYLASK---KFVHRDLAARNCMLDEKFTVK 168 (298)
T ss_dssp CCEEEEECCTTCBHHHHHHC---------TTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEE
T ss_pred ceEEEEeCCCCCCHHHHHHh---------cccCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEECCCCCEE
Confidence 67999999999999999962 234578999999999999999999987 999999999999999999999
Q ss_pred EeecccceecCCCCC--ccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHh-CCCCCccccccCchhhhhcc
Q 039533 782 VGDFGLARILSPDHT--QTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVI-GKKPIDIMFEGDINLHNFGR 858 (949)
Q Consensus 782 l~DfG~a~~~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~ellt-g~~Pf~~~~~~~~~~~~~~~ 858 (949)
|+|||.++....... ........||+.|+|||.+.+..++.++||||||+++|||++ |.+||......+.. .
T Consensus 169 l~Dfg~a~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~~~--~--- 243 (298)
T 3f66_A 169 VADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDIT--V--- 243 (298)
T ss_dssp ECSCGGGCCCSCGGGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTTTHH--H---
T ss_pred ECcccccccccccchhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHHHHH--H---
Confidence 999999987654332 111223457889999999988889999999999999999999 55565432211110 0
Q ss_pred ccCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHHhHHhhcc
Q 039533 859 KALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHELQSIKNILLG 937 (949)
Q Consensus 859 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~~~~~~ 937 (949)
..........+ ..++..+.+++.+|++.||++|||++|+++.|+++...+.+
T Consensus 244 --------~~~~~~~~~~~-------------------~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~~~~ 295 (298)
T 3f66_A 244 --------YLLQGRRLLQP-------------------EYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIG 295 (298)
T ss_dssp --------HHHTTCCCCCC-------------------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTSCC
T ss_pred --------HHhcCCCCCCC-------------------ccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhhcc
Confidence 00000000000 02234688999999999999999999999999999887654
No 155
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=1e-38 Score=343.05 Aligned_cols=247 Identities=21% Similarity=0.291 Sum_probs=178.8
Q ss_pred hcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCC---CcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCc
Q 039533 625 TSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQH---HGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGND 701 (949)
Q Consensus 625 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 701 (949)
.++|++.+.||+|+||.||+|++..+++.||+|++.... ....+.+.+|+.++++++||||+++++++...+
T Consensus 12 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~----- 86 (275)
T 2eue_A 12 IGNYQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKD----- 86 (275)
T ss_dssp CCCBCCCC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEECSS-----
T ss_pred ccceEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCC-----
Confidence 368999999999999999999998899999999997542 233467889999999999999999999976544
Q ss_pred cceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceE
Q 039533 702 FKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTAR 781 (949)
Q Consensus 702 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~k 781 (949)
..++||||+ ++++.+++. ....+++.++..++.|++.||+|||++ +|+||||||+||++++++.+|
T Consensus 87 ~~~lv~e~~-~~~l~~~~~----------~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dikp~Nil~~~~~~~k 152 (275)
T 2eue_A 87 EIIMVIEYA-GNELFDYIV----------QRDKMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVK 152 (275)
T ss_dssp CEEEEEECC-CEEHHHHHH----------TSSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTSCEE
T ss_pred eEEEEehhc-CCcHHHHHH----------hcCCCCHHHHHHHHHHHHHHHHHHHHC---CCeeccCChHhEEECCCCCEE
Confidence 789999999 678888875 234589999999999999999999988 899999999999999999999
Q ss_pred EeecccceecCCCCCccccccccCccCccCccccCCCcc-CCccchHHHHHHHHHHHhCCCCCccccccCchhhhhcccc
Q 039533 782 VGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEV-STNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKA 860 (949)
Q Consensus 782 l~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~ 860 (949)
|+|||.++......... ...||+.|+|||++.+..+ +.++||||+||++|||++|+.||+...... ..
T Consensus 153 l~Dfg~~~~~~~~~~~~---~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~--~~------ 221 (275)
T 2eue_A 153 IADFGLSNIMTDGNFLK---TSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPV--LF------ 221 (275)
T ss_dssp ECCSSCC------------------CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCCSSHHH--HH------
T ss_pred EeecccceeccCccccc---CCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHH--HH------
Confidence 99999998765443222 3458999999999988765 789999999999999999999996431110 00
Q ss_pred CCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 039533 861 LPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVH 926 (949)
Q Consensus 861 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 926 (949)
..+.... ...+ ...+..+.+++.+|++.||++|||++|+++
T Consensus 222 -----~~~~~~~-~~~~-------------------~~~~~~~~~li~~~l~~dP~~Rps~~e~l~ 262 (275)
T 2eue_A 222 -----KNISNGV-YTLP-------------------KFLSPGAAGLIKRMLIVNPLNRISIHEIMQ 262 (275)
T ss_dssp -----HHHHHTC-CCCC-------------------TTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred -----HHHHhCC-CCCC-------------------ccCCHHHHHHHHHHhhcCHhHCCCHHHHhh
Confidence 0000000 0000 012345789999999999999999999975
No 156
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00 E-value=1.7e-38 Score=343.16 Aligned_cols=252 Identities=19% Similarity=0.236 Sum_probs=202.3
Q ss_pred hcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCC--cchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCcc
Q 039533 625 TSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHH--GASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDF 702 (949)
Q Consensus 625 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 702 (949)
.++|++.+.||+|+||.||+|.+..+++.||+|++..... ...+.+.+|+.++++++||||+++++++.... .
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-----~ 79 (284)
T 3kk8_A 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEES-----F 79 (284)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSS-----E
T ss_pred hhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCC-----E
Confidence 4689999999999999999999998999999999975432 23467889999999999999999999976544 7
Q ss_pred ceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCc---
Q 039533 703 KASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMT--- 779 (949)
Q Consensus 703 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~--- 779 (949)
.++||||+++++|.+++. ....+++..+..++.|++.||+|||++ +|+||||||+||+++.++.
T Consensus 80 ~~~v~e~~~~~~l~~~~~----------~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~~ 146 (284)
T 3kk8_A 80 HYLVFDLVTGGELFEDIV----------AREFYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAA 146 (284)
T ss_dssp EEEEECCCCSCBHHHHHH----------HHSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSTTCC
T ss_pred EEEEEecCCCCCHHHHHH----------hcCCCCHHHHHHHHHHHHHHHHHHHHC---CcCcCCCCHHHEEEecCCCCCc
Confidence 899999999999999886 235689999999999999999999988 8999999999999986655
Q ss_pred eEEeecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhccc
Q 039533 780 ARVGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRK 859 (949)
Q Consensus 780 ~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~ 859 (949)
+||+|||.+.......... ...||+.|+|||++.+..++.++||||+|+++|+|++|+.||....... .....
T Consensus 147 ~kl~Dfg~~~~~~~~~~~~---~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~--~~~~~-- 219 (284)
T 3kk8_A 147 VKLADFGLAIEVNDSEAWH---GFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHR--LYAQI-- 219 (284)
T ss_dssp EEECCCTTCEECCSSCBCC---CSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH--HHHHH--
T ss_pred EEEeeceeeEEcccCcccc---CCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchhH--HHHHH--
Confidence 9999999998766543322 3569999999999999999999999999999999999999995432111 00000
Q ss_pred cCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 039533 860 ALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVH 926 (949)
Q Consensus 860 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 926 (949)
....... +. +.....+..+.+++.+|++.||++|||++|+++
T Consensus 220 ---------~~~~~~~-~~---------------~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 261 (284)
T 3kk8_A 220 ---------KAGAYDY-PS---------------PEWDTVTPEAKSLIDSMLTVNPKKRITADQALK 261 (284)
T ss_dssp ---------HHTCCCC-CT---------------TTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred ---------HhccccC-Cc---------------hhhcccCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 0000000 00 000123456789999999999999999999987
No 157
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00 E-value=6.2e-39 Score=362.16 Aligned_cols=262 Identities=19% Similarity=0.225 Sum_probs=204.7
Q ss_pred CHHHHHHHhcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCC---CcchHHHHHHHHHHHhcCCCcceeEEeeee
Q 039533 617 SYQDLYNATSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQH---HGASRSFIAECKALKSIRHRNLVKVLTACL 693 (949)
Q Consensus 617 ~~~~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~ 693 (949)
.+.+.....++|++.+.||+|+||.||+|++..+++.||||+++... ....+.+.+|..++.+++||||+++++++.
T Consensus 52 ~~~~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~ 131 (412)
T 2vd5_A 52 RLKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQ 131 (412)
T ss_dssp HHHHHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEE
T ss_pred hhhhccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEe
Confidence 34455566789999999999999999999999899999999997432 223345889999999999999999999976
Q ss_pred cccccCCccceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCee
Q 039533 694 GADYRGNDFKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVL 773 (949)
Q Consensus 694 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIl 773 (949)
+.+ ..++||||+++|+|.+++.. ....+++..++.++.||+.||+|||++ +|+||||||+|||
T Consensus 132 ~~~-----~~~lVmE~~~gg~L~~~l~~---------~~~~l~~~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NIL 194 (412)
T 2vd5_A 132 DEN-----YLYLVMEYYVGGDLLTLLSK---------FGERIPAEMARFYLAEIVMAIDSVHRL---GYVHRDIKPDNIL 194 (412)
T ss_dssp CSS-----EEEEEECCCCSCBHHHHHHH---------HSSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEE
T ss_pred eCC-----EEEEEEcCCCCCcHHHHHHh---------cCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecccCHHHee
Confidence 544 78999999999999999962 124689999999999999999999987 9999999999999
Q ss_pred ecCCCceEEeecccceecCCCCCccccccccCccCccCccccC-------CCccCCccchHHHHHHHHHHHhCCCCCccc
Q 039533 774 LDDYMTARVGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGV-------GCEVSTNGDVYSYGILLLELVIGKKPIDIM 846 (949)
Q Consensus 774 l~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~-------~~~~~~~sDiwSlGvvl~elltg~~Pf~~~ 846 (949)
++.++++||+|||+++......... .....||+.|+|||++. +..++.++|||||||++|||++|+.||...
T Consensus 195 ld~~g~vkL~DFGla~~~~~~~~~~-~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~ 273 (412)
T 2vd5_A 195 LDRCGHIRLADFGSCLKLRADGTVR-SLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYAD 273 (412)
T ss_dssp ECTTSCEEECCCTTCEECCTTSCEE-CSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCS
T ss_pred ecCCCCEEEeechhheeccCCCccc-cceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCC
Confidence 9999999999999998876543322 22356999999999987 457899999999999999999999999643
Q ss_pred cccCchhhhhccccCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhh-HHHHHHHHHHHhhccccCCCCCC---CCHH
Q 039533 847 FEGDINLHNFGRKALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINS-IIECLISMVRIGVACSMELPQDR---TNMT 922 (949)
Q Consensus 847 ~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~l~~~cl~~dP~~R---Ps~~ 922 (949)
.... .+. .++... ....++. ....+..+.+++.+|++ +|++| |+++
T Consensus 274 ~~~~-~~~------------~i~~~~----------------~~~~~p~~~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ 323 (412)
T 2vd5_A 274 STAE-TYG------------KIVHYK----------------EHLSLPLVDEGVPEEARDFIQRLLC-PPETRLGRGGAG 323 (412)
T ss_dssp SHHH-HHH------------HHHTHH----------------HHCCCC----CCCHHHHHHHHTTSS-CGGGCTTTTTHH
T ss_pred CHHH-HHH------------HHHhcc----------------cCcCCCccccCCCHHHHHHHHHHcC-ChhhcCCCCCHH
Confidence 2111 000 000000 0000000 01234568899999999 99998 5888
Q ss_pred HHHH
Q 039533 923 NVVH 926 (949)
Q Consensus 923 ev~~ 926 (949)
|+++
T Consensus 324 ei~~ 327 (412)
T 2vd5_A 324 DFRT 327 (412)
T ss_dssp HHHT
T ss_pred HHhc
Confidence 8864
No 158
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00 E-value=2.1e-38 Score=341.50 Aligned_cols=262 Identities=25% Similarity=0.402 Sum_probs=207.9
Q ss_pred hcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCCcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCccce
Q 039533 625 TSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFKA 704 (949)
Q Consensus 625 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 704 (949)
.++|++.+.||+|+||.||+|.+. +++.||||+++... ...+.+.+|++++++++||||+++++++.. +..+
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~------~~~~ 83 (279)
T 1qpc_A 12 RETLKLVERLGAGQFGEVWMGYYN-GHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVTQ------EPIY 83 (279)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS------SSCE
T ss_pred HHhhhheeeecCCCCeEEEEEEEc-CCcEEEEEEecCCc-ccHHHHHHHHHHHHhCCCcCcceEEEEEcC------CCcE
Confidence 467888999999999999999987 67889999997543 345789999999999999999999998642 2578
Q ss_pred eEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEee
Q 039533 705 SVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVGD 784 (949)
Q Consensus 705 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~D 784 (949)
+||||+++++|.+++... ....+++.++..++.|++.||+|||++ +|+||||||+||++++++.+||+|
T Consensus 84 ~v~e~~~~~~L~~~l~~~--------~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~D 152 (279)
T 1qpc_A 84 IITEYMENGSLVDFLKTP--------SGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIAD 152 (279)
T ss_dssp EEEECCTTCBHHHHTTSH--------HHHTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECC
T ss_pred EEEecCCCCCHHHHHhcC--------CCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHhhEEEcCCCCEEECC
Confidence 999999999999999621 123589999999999999999999987 999999999999999999999999
Q ss_pred cccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHh-CCCCCccccccCchhhhhccccCCC
Q 039533 785 FGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVI-GKKPIDIMFEGDINLHNFGRKALPD 863 (949)
Q Consensus 785 fG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~ 863 (949)
||.++......... .....++..|+|||++.+..++.++||||||+++|||++ |+.||....... ....
T Consensus 153 fg~~~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~--~~~~------- 222 (279)
T 1qpc_A 153 FGLARLIEDNEYTA-REGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPE--VIQN------- 222 (279)
T ss_dssp CTTCEECSSSCEEC-CTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH--HHHH-------
T ss_pred CcccccccCccccc-ccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHHH--HHHH-------
Confidence 99998876543221 123447889999999988889999999999999999999 999986432111 0000
Q ss_pred chhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHHhHHhhccC
Q 039533 864 DVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHELQSIKNILLGV 938 (949)
Q Consensus 864 ~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~~~~~~~ 938 (949)
+........ ...++..+.+++.+|++.||++|||++|+++.|+++.......
T Consensus 223 -----~~~~~~~~~------------------~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~~~ 274 (279)
T 1qpc_A 223 -----LERGYRMVR------------------PDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTATEGQ 274 (279)
T ss_dssp -----HHTTCCCCC------------------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC---
T ss_pred -----HhcccCCCC------------------cccccHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHhccCC
Confidence 000000000 0123456889999999999999999999999999998775543
No 159
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00 E-value=5.5e-39 Score=358.48 Aligned_cols=254 Identities=21% Similarity=0.225 Sum_probs=192.4
Q ss_pred hcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCCcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCccce
Q 039533 625 TSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFKA 704 (949)
Q Consensus 625 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 704 (949)
.++|++.+.||+|+||+||+|++..+++.||||++..... ..+.+.+|+.++++++||||+++++++...+ ..+
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~-----~~~ 92 (361)
T 3uc3_A 19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAA-IDENVQREIINHRSLRHPNIVRFKEVILTPT-----HLA 92 (361)
T ss_dssp TTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTT-SCHHHHHHHHHHHHCCCTTBCCEEEEEECSS-----EEE
T ss_pred CCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCcc-ccHHHHHHHHHHHhCCCCCCCcEEEEEeeCC-----EEE
Confidence 4689999999999999999999998999999999975432 3467889999999999999999999986544 789
Q ss_pred eEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCc--eEE
Q 039533 705 SVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMT--ARV 782 (949)
Q Consensus 705 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~--~kl 782 (949)
+||||+++|+|.+++. ....+++..+..++.|++.||+|||++ +|+||||||+||+++.++. +||
T Consensus 93 lv~e~~~~~~L~~~l~----------~~~~~~~~~~~~i~~ql~~~L~~LH~~---~ivH~Dlkp~Nill~~~~~~~~kl 159 (361)
T 3uc3_A 93 IIMEYASGGELYERIC----------NAGRFSEDEARFFFQQLLSGVSYCHSM---QICHRDLKLENTLLDGSPAPRLKI 159 (361)
T ss_dssp EEEECCCSCBHHHHHH----------HHSSCCHHHHHHHHHHHHHHHHHHHHT---TCCSCCCCGGGEEECSSSSCCEEE
T ss_pred EEEEeCCCCCHHHHHH----------hcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCceEEE
Confidence 9999999999999986 234689999999999999999999987 8999999999999987765 999
Q ss_pred eecccceecCCCCCccccccccCccCccCccccCCCccCCc-cchHHHHHHHHHHHhCCCCCccccccCchhhhhccccC
Q 039533 783 GDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTN-GDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKAL 861 (949)
Q Consensus 783 ~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~-sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~ 861 (949)
+|||+++........ ....||+.|+|||++.+..++.+ +||||+||++|||++|+.||........ .....
T Consensus 160 ~Dfg~a~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~-~~~~~---- 231 (361)
T 3uc3_A 160 CDFGYSKSSVLHSQP---KSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRD-YRKTI---- 231 (361)
T ss_dssp CCCCCC------------------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCC-HHHHH----
T ss_pred eecCccccccccCCC---CCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHH-HHHHH----
Confidence 999999754332221 23459999999999988877655 8999999999999999999964322111 11100
Q ss_pred CCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHH
Q 039533 862 PDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHE 927 (949)
Q Consensus 862 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 927 (949)
..+......... ....+..+.+++.+|++.||++|||+.|+++.
T Consensus 232 ----~~~~~~~~~~~~------------------~~~~s~~~~~li~~~L~~dP~~Rps~~ell~h 275 (361)
T 3uc3_A 232 ----QRILSVKYSIPD------------------DIRISPECCHLISRIFVADPATRISIPEIKTH 275 (361)
T ss_dssp ----HHHHTTCCCCCT------------------TSCCCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred ----HHHhcCCCCCCC------------------cCCCCHHHHHHHHHHccCChhHCcCHHHHHhC
Confidence 001110000000 00123467899999999999999999999864
No 160
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=1.1e-38 Score=352.47 Aligned_cols=243 Identities=23% Similarity=0.324 Sum_probs=200.9
Q ss_pred hcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCCc--------chHHHHHHHHHHHhcCCCcceeEEeeeeccc
Q 039533 625 TSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHG--------ASRSFIAECKALKSIRHRNLVKVLTACLGAD 696 (949)
Q Consensus 625 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~--------~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 696 (949)
.++|++.+.||+|+||.||+|++..+++.||||+++..... ..+.+.+|+.++++++||||+++++++...+
T Consensus 23 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~ 102 (335)
T 3dls_A 23 SQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQG 102 (335)
T ss_dssp HHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECSS
T ss_pred ccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeCC
Confidence 46799999999999999999999999999999999754321 2346778999999999999999999976544
Q ss_pred ccCCccceeEeeeccCC-ChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeec
Q 039533 697 YRGNDFKASVYEFMHYG-SLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLD 775 (949)
Q Consensus 697 ~~~~~~~~lv~e~~~~g-sL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~ 775 (949)
..++||||+.+| +|.+++. ....+++..+..|+.|++.||+|||++ +|+||||||+||+++
T Consensus 103 -----~~~lv~e~~~~g~~l~~~~~----------~~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~ 164 (335)
T 3dls_A 103 -----FFQLVMEKHGSGLDLFAFID----------RHPRLDEPLASYIFRQLVSAVGYLRLK---DIIHRDIKDENIVIA 164 (335)
T ss_dssp -----EEEEEEECCTTSCBHHHHHH----------TCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEC
T ss_pred -----EEEEEEEeCCCCccHHHHHH----------hcCCCCHHHHHHHHHHHHHHHHHHHhC---CeEEeccCHHHEEEc
Confidence 789999999777 9999986 234589999999999999999999988 999999999999999
Q ss_pred CCCceEEeecccceecCCCCCccccccccCccCccCccccCCCcc-CCccchHHHHHHHHHHHhCCCCCccccccCchhh
Q 039533 776 DYMTARVGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEV-STNGDVYSYGILLLELVIGKKPIDIMFEGDINLH 854 (949)
Q Consensus 776 ~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~ 854 (949)
.++.+||+|||+++......... ...||+.|+|||++.+..+ +.++|||||||++|||++|+.||......
T Consensus 165 ~~~~~kL~Dfg~a~~~~~~~~~~---~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~----- 236 (335)
T 3dls_A 165 EDFTIKLIDFGSAAYLERGKLFY---TFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEET----- 236 (335)
T ss_dssp TTSCEEECCCTTCEECCTTCCBC---EECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGGG-----
T ss_pred CCCcEEEeecccceECCCCCcee---ccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHHH-----
Confidence 99999999999998876544322 3459999999999988776 78999999999999999999999632110
Q ss_pred hhccccCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHH
Q 039533 855 NFGRKALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHE 927 (949)
Q Consensus 855 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 927 (949)
....... +. ..+..+.+++.+|++.||++|||++|+++.
T Consensus 237 --------------~~~~~~~-~~-------------------~~~~~l~~li~~~L~~dP~~Rps~~ell~h 275 (335)
T 3dls_A 237 --------------VEAAIHP-PY-------------------LVSKELMSLVSGLLQPVPERRTTLEKLVTD 275 (335)
T ss_dssp --------------TTTCCCC-SS-------------------CCCHHHHHHHHHHTCSSGGGSCCHHHHHHC
T ss_pred --------------HhhccCC-Cc-------------------ccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0000000 00 123457899999999999999999999874
No 161
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00 E-value=5.9e-39 Score=352.52 Aligned_cols=283 Identities=22% Similarity=0.280 Sum_probs=216.3
Q ss_pred cCHHHHHHHhcCCCCCCeeeeecCceEEEEEEc-----CCCEEEEEEEEecCCC-cchHHHHHHHHHHHhc-CCCcceeE
Q 039533 616 LSYQDLYNATSGFSSANLVGVGSFGSVYKGIID-----EGRTTIAVKVFNLQHH-GASRSFIAECKALKSI-RHRNLVKV 688 (949)
Q Consensus 616 ~~~~~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~-----~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~~ 688 (949)
+...+.....++|++.+.||+|+||.||+|++. .+++.||||+++.... ...+.+.+|+.+++++ +||||+++
T Consensus 17 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~ 96 (316)
T 2xir_A 17 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNL 96 (316)
T ss_dssp CCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred ccccceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeE
Confidence 344455556688999999999999999999863 4668999999975433 2346789999999999 79999999
Q ss_pred EeeeecccccCCccceeEeeeccCCChhhhcCCCCCCCc------cccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCe
Q 039533 689 LTACLGADYRGNDFKASVYEFMHYGSLEEWLHPFTGEDE------IDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVT 762 (949)
Q Consensus 689 ~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~------~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~i 762 (949)
++++...+ ...++||||+++++|.+++........ .......+++..+..++.|++.||+|||++ +|
T Consensus 97 ~~~~~~~~----~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i 169 (316)
T 2xir_A 97 LGACTKPG----GPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KC 169 (316)
T ss_dssp EEEECCTT----SCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHT---TC
T ss_pred EEEEecCC----CceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhC---Cc
Confidence 99975432 358999999999999999974321100 000123388999999999999999999987 99
Q ss_pred EecCCCCCCeeecCCCceEEeecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHh-CCC
Q 039533 763 AHCDLKPSNVLLDDYMTARVGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVI-GKK 841 (949)
Q Consensus 763 vHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~ellt-g~~ 841 (949)
+||||||+||+++.++.+||+|||.++...............||+.|+|||++.+..++.++|||||||++|||+| |+.
T Consensus 170 ~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~ 249 (316)
T 2xir_A 170 IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGAS 249 (316)
T ss_dssp CCSCCSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCC
T ss_pred ccccCccceEEECCCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCC
Confidence 9999999999999999999999999987655444333334557899999999988889999999999999999998 999
Q ss_pred CCccccccCchhhhhccccCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCH
Q 039533 842 PIDIMFEGDINLHNFGRKALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNM 921 (949)
Q Consensus 842 Pf~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~ 921 (949)
||........ .. ..+........ ....+..+.+++.+||+.||++|||+
T Consensus 250 p~~~~~~~~~-~~------------~~~~~~~~~~~------------------~~~~~~~l~~li~~~l~~dp~~Rps~ 298 (316)
T 2xir_A 250 PYPGVKIDEE-FC------------RRLKEGTRMRA------------------PDYTTPEMYQTMLDCWHGEPSQRPTF 298 (316)
T ss_dssp SSTTCCCSHH-HH------------HHHHHTCCCCC------------------CTTCCHHHHHHHHHHTCSSGGGSCCH
T ss_pred CCcccchhHH-HH------------HHhccCccCCC------------------CCCCCHHHHHHHHHHcCCChhhCcCH
Confidence 9964321111 10 00000000000 00124467899999999999999999
Q ss_pred HHHHHHHHHhHHhhc
Q 039533 922 TNVVHELQSIKNILL 936 (949)
Q Consensus 922 ~ev~~~L~~i~~~~~ 936 (949)
.||++.|+++.+...
T Consensus 299 ~ell~~L~~~~~~~~ 313 (316)
T 2xir_A 299 SELVEHLGNLLQANA 313 (316)
T ss_dssp HHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHhhhc
Confidence 999999999987643
No 162
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00 E-value=7.7e-39 Score=346.57 Aligned_cols=262 Identities=25% Similarity=0.408 Sum_probs=212.4
Q ss_pred HhcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCCcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCccc
Q 039533 624 ATSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFK 703 (949)
Q Consensus 624 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 703 (949)
..++|++.+.||+|+||.||+|.+..+++.||+|++.... ...+.+.+|++++++++||||+++++++.... ..
T Consensus 11 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-----~~ 84 (288)
T 3kfa_A 11 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREP-----PF 84 (288)
T ss_dssp CGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCS-THHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-----SE
T ss_pred cccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCH-HHHHHHHHHHHHHHhCCCCCEeeEEEEEccCC-----CE
Confidence 4567889999999999999999999889999999997433 34578999999999999999999999975443 78
Q ss_pred eeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEe
Q 039533 704 ASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVG 783 (949)
Q Consensus 704 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~ 783 (949)
++||||+++++|.+++... ....+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+
T Consensus 85 ~~v~e~~~~~~L~~~~~~~--------~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~ 153 (288)
T 3kfa_A 85 YIITEFMTYGNLLDYLREC--------NRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVA 153 (288)
T ss_dssp EEEEECCTTEEHHHHHHHC--------CTTTSCHHHHHHHHHHHHHHHHHHHHH---TCCCSCCSGGGEEECGGGCEEEC
T ss_pred EEEEEcCCCCcHHHHHHhc--------ccCCccHhHHHHHHHHHHHHHHHHHHC---CccCCCCCcceEEEcCCCCEEEc
Confidence 9999999999999999621 234589999999999999999999988 89999999999999999999999
Q ss_pred ecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHh-CCCCCccccccCchhhhhccccCC
Q 039533 784 DFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVI-GKKPIDIMFEGDINLHNFGRKALP 862 (949)
Q Consensus 784 DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~ 862 (949)
|||.+.......... .....+|+.|+|||++.+..++.++||||||+++|+|++ |..||.......
T Consensus 154 Dfg~~~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~~------------ 220 (288)
T 3kfa_A 154 DFGLSRLMTGDTYTA-HAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ------------ 220 (288)
T ss_dssp CCCGGGTSCSSSSEE-ETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG------------
T ss_pred cCccceeccCCcccc-ccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH------------
Confidence 999998765443322 223447889999999998889999999999999999999 999986432111
Q ss_pred CchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHHhHHhh
Q 039533 863 DDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHELQSIKNIL 935 (949)
Q Consensus 863 ~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~~~~ 935 (949)
..+.+........ ...++..+.+++.+|++.||++|||++|+++.|+++....
T Consensus 221 --~~~~~~~~~~~~~------------------~~~~~~~l~~li~~~l~~dp~~Rps~~~~~~~l~~~~~~~ 273 (288)
T 3kfa_A 221 --VYELLEKDYRMER------------------PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQES 273 (288)
T ss_dssp --HHHHHHTTCCCCC------------------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred --HHHHHhccCCCCC------------------CCCCCHHHHHHHHHHhCCChhhCcCHHHHHHHHHHHHHhc
Confidence 1111111110000 0123456889999999999999999999999999987654
No 163
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00 E-value=6.7e-39 Score=351.18 Aligned_cols=272 Identities=22% Similarity=0.282 Sum_probs=198.3
Q ss_pred cCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCCc--chHHHHHHHHHHHhcCCCcceeEEeeeecccccCCccc
Q 039533 626 SGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHG--ASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFK 703 (949)
Q Consensus 626 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 703 (949)
++|++.+.||+|+||.||+|++..+++.||||++...... ..+.+.+|++++++++||||+++++++...+ ..
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-----~~ 77 (311)
T 4agu_A 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKR-----RL 77 (311)
T ss_dssp CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETT-----EE
T ss_pred ccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCC-----eE
Confidence 5789999999999999999999988999999998654332 2456889999999999999999999976544 78
Q ss_pred eeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEe
Q 039533 704 ASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVG 783 (949)
Q Consensus 704 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~ 783 (949)
++||||+++++|.+++. ....+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+
T Consensus 78 ~lv~e~~~~~~l~~~~~----------~~~~~~~~~~~~i~~~l~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~ 144 (311)
T 4agu_A 78 HLVFEYCDHTVLHELDR----------YQRGVPEHLVKSITWQTLQAVNFCHKH---NCIHRDVKPENILITKHSVIKLC 144 (311)
T ss_dssp EEEEECCSEEHHHHHHH----------TSSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEEC
T ss_pred EEEEEeCCCchHHHHHh----------hhcCCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCChhhEEEcCCCCEEEe
Confidence 99999999999999876 234589999999999999999999987 99999999999999999999999
Q ss_pred ecccceecCCCCCccccccccCccCccCccccCC-CccCCccchHHHHHHHHHHHhCCCCCccccccCch--hhhhcccc
Q 039533 784 DFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVG-CEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDIN--LHNFGRKA 860 (949)
Q Consensus 784 DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~--~~~~~~~~ 860 (949)
|||.++......... ....||..|+|||++.+ ..++.++||||+|+++|||++|+.||......+.. ........
T Consensus 145 Dfg~~~~~~~~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~ 222 (311)
T 4agu_A 145 DFGFARLLTGPSDYY--DDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDL 222 (311)
T ss_dssp CCTTCEECC--------------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSC
T ss_pred eCCCchhccCccccc--CCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhccc
Confidence 999998765433221 13458999999999876 56899999999999999999999999644322110 00000000
Q ss_pred CCCchh-----hhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 039533 861 LPDDVM-----DIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVH 926 (949)
Q Consensus 861 ~~~~~~-----~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 926 (949)
.+.... ........+++.+. ..........+..+.+++.+|++.||++|||++|+++
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 284 (311)
T 4agu_A 223 IPRHQQVFSTNQYFSGVKIPDPEDM---------EPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLH 284 (311)
T ss_dssp CHHHHHHHHTCGGGTTCCCCCCSSC---------CCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHT
T ss_pred ccccccccccccccccCcCCCcccc---------chhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhc
Confidence 000000 00000000000000 0000001134556889999999999999999999975
No 164
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00 E-value=6.7e-40 Score=361.03 Aligned_cols=275 Identities=20% Similarity=0.327 Sum_probs=211.2
Q ss_pred HHHHHhcCCCCCCeeeeecCceEEEEEEc-----CCCEEEEEEEEecCCC-cchHHHHHHHHHHHhcCCCcceeEEeeee
Q 039533 620 DLYNATSGFSSANLVGVGSFGSVYKGIID-----EGRTTIAVKVFNLQHH-GASRSFIAECKALKSIRHRNLVKVLTACL 693 (949)
Q Consensus 620 ~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~-----~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~ 693 (949)
+.+...++|++.+.||+|+||.||+|++. .+++.||||++..... .....+.+|+.++++++||||+++++++.
T Consensus 19 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~ 98 (322)
T 1p4o_A 19 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVS 98 (322)
T ss_dssp TTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEEC
T ss_pred hhcchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEEEc
Confidence 44456678999999999999999999876 3468899999874432 23456889999999999999999999975
Q ss_pred cccccCCccceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCee
Q 039533 694 GADYRGNDFKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVL 773 (949)
Q Consensus 694 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIl 773 (949)
..+ ..++||||+++|+|.+++...............+++..++.++.|++.||+|||++ +|+||||||+||+
T Consensus 99 ~~~-----~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~NIl 170 (322)
T 1p4o_A 99 QGQ-----PTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCM 170 (322)
T ss_dssp SSS-----SCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCSGGGEE
T ss_pred cCC-----ccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CCccCCCccceEE
Confidence 443 78999999999999999963210000001124578999999999999999999988 9999999999999
Q ss_pred ecCCCceEEeecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHh-CCCCCccccccCch
Q 039533 774 LDDYMTARVGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVI-GKKPIDIMFEGDIN 852 (949)
Q Consensus 774 l~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~ellt-g~~Pf~~~~~~~~~ 852 (949)
++.++.+||+|||+++...............+|+.|+|||++.+..++.++||||||+++|||++ |+.||.......
T Consensus 171 i~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~-- 248 (322)
T 1p4o_A 171 VAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQ-- 248 (322)
T ss_dssp ECTTCCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHH--
T ss_pred EcCCCeEEECcCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCHHH--
Confidence 99999999999999986654333222223457889999999988889999999999999999999 899986432111
Q ss_pred hhhhccccCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHHhH
Q 039533 853 LHNFGRKALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHELQSIK 932 (949)
Q Consensus 853 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~ 932 (949)
... .+........+ ..++..+.+++.+|++.||++|||+.|+++.|+++.
T Consensus 249 ~~~-----------~~~~~~~~~~~-------------------~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~ 298 (322)
T 1p4o_A 249 VLR-----------FVMEGGLLDKP-------------------DNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEM 298 (322)
T ss_dssp HHH-----------HHHTTCCCCCC-------------------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGS
T ss_pred HHH-----------HHHcCCcCCCC-------------------CCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHhh
Confidence 000 00111110100 123456889999999999999999999999998875
Q ss_pred Hh
Q 039533 933 NI 934 (949)
Q Consensus 933 ~~ 934 (949)
..
T Consensus 299 ~~ 300 (322)
T 1p4o_A 299 EP 300 (322)
T ss_dssp CT
T ss_pred cc
Confidence 43
No 165
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=100.00 E-value=1.2e-37 Score=352.73 Aligned_cols=351 Identities=18% Similarity=0.152 Sum_probs=233.6
Q ss_pred CccCccCCCCcce-eeeeEEeCCCCcEEEEEcCCCCCCccccCCCCCCCCCceeeccCceeccccCCcccCcccCcEEee
Q 039533 42 VLGTWNESIHFCK-WYGVTCSRRHQRVTLLDLRSLKLAGSVSHFIGNLSFLKQLYLQVNSFTHEIPSEIGGLRRLKVLAL 120 (949)
Q Consensus 42 ~l~sW~~~~~~C~-w~gv~C~~~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L 120 (949)
.+++|..+.+||. |.+..|.....+ +............-..+++++.|++++|.++...+..|.++++|++|+|
T Consensus 2 ~~~~~~~~~~C~~~~~~~~c~~~~~~-----i~~~~~~~~~~~~~~~l~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L 76 (390)
T 3o6n_A 2 NVKPRQPEYKCIDSNLQYDCVFYDVH-----IDMQTQDVYFGFEDITLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNL 76 (390)
T ss_dssp -----CCEECBCC------EEEESCE-----ECSSCCCCEESCSSGGGCCCSEEEEESCEESEECTHHHHHCCCCSEEEC
T ss_pred CcCCCCCccceehhhhhhccceeeee-----eecccccccccccccccCCceEEEecCCchhhCChhHhcccccCcEEEC
Confidence 3678988888885 555555432211 2222222222333346799999999999998544445799999999999
Q ss_pred ccccccCcCCCCCCCCccceeecCCCccccccccccccCCCCCcEEECCCCCCCCCCCCCcCCCCCccEEeccccccCCC
Q 039533 121 NNNSICGEIPTNISRCSTLIPIHPQNNQLVGKILSRFSSLSKTEILNLGSNHLTGSIPSSLGNLSSIHTISLAYNNLDGT 200 (949)
Q Consensus 121 s~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 200 (949)
++|.+++..|..|+++++|++|++++|.+.+..+..|..+++|++|+|++|.++...+..|+++++|++|+|++|++++.
T Consensus 77 ~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~ 156 (390)
T 3o6n_A 77 NDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERI 156 (390)
T ss_dssp TTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBC
T ss_pred CCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCCccCcCCHHHhcCCCCCcEEECCCCccCcc
Confidence 99999977778999999999999999999999999999999999999999999955555579999999999999999988
Q ss_pred CCCcccCCCccccccccCcccccccccccCCCCChhhhccccccccccCCCCCCCCCCcchhccccccCcccEEEccCCC
Q 039533 201 IPNSFGWFENLVFLSLAANNLSVVENKLTGEVPSLEKLQRLQHFTITSNSLGSGGNDDLSFLCSLTNATRLTWMHINSNN 280 (949)
Q Consensus 201 ~p~~~~~l~~L~~L~Ls~N~l~~~~~~l~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~~~~L~~L~L~~N~ 280 (949)
.|..|+.+++|++|++++|+++.++ +..+++ |+.|++++|.
T Consensus 157 ~~~~~~~l~~L~~L~l~~n~l~~~~---------~~~l~~------------------------------L~~L~l~~n~ 197 (390)
T 3o6n_A 157 EDDTFQATTSLQNLQLSSNRLTHVD---------LSLIPS------------------------------LFHANVSYNL 197 (390)
T ss_dssp CTTTTSSCTTCCEEECCSSCCSBCC---------GGGCTT------------------------------CSEEECCSSC
T ss_pred ChhhccCCCCCCEEECCCCcCCccc---------cccccc------------------------------cceeeccccc
Confidence 8888999999999999999876442 223333 4444444444
Q ss_pred CCccCCchhhcccccccEEEccCccccCCCCCCCCCCCcccEEEeecceecccCCCcccccCCCCEEecCCcccccccCc
Q 039533 281 FGGLLPGCISNLSKTIKTLFLNNNKIYGSIPAGIGNFVNLQRLDMWNNQLSGTIPPAIGELQNLKILGLNRNKLSGNIPP 360 (949)
Q Consensus 281 l~~~~p~~~~~l~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~ 360 (949)
+++.. .+..|++|++++|+++.. |.. ..++|++|+|++|.+++. ..+..+++|+.|+|++|++++..|.
T Consensus 198 l~~~~------~~~~L~~L~l~~n~l~~~-~~~--~~~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~Ls~n~l~~~~~~ 266 (390)
T 3o6n_A 198 LSTLA------IPIAVEELDASHNSINVV-RGP--VNVELTILKLQHNNLTDT--AWLLNYPGLVEVDLSYNELEKIMYH 266 (390)
T ss_dssp CSEEE------CCSSCSEEECCSSCCCEE-ECC--CCSSCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCEEESG
T ss_pred ccccC------CCCcceEEECCCCeeeec-ccc--ccccccEEECCCCCCccc--HHHcCCCCccEEECCCCcCCCcChh
Confidence 44321 123466666666666533 322 235666777777776642 4566666777777777777666666
Q ss_pred ccccccccceeecccccccccCCCCCCCCCCCcEEEeeCccccCCCCCcccCCcccceeeccCCCccCCCCccccccccc
Q 039533 361 SIGNLKMLLNLFLNDNFLEVSIPSSLGQCESLIEINLSNNNLSGTIPPQFFSLSSLSISLDWSRNKLTGSLPIEVGKLKI 440 (949)
Q Consensus 361 ~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~l~~~L~ls~N~l~~~~p~~~~~l~~ 440 (949)
.|.++++|+.|+|++|++++ +|..+..+++|++|+|++|+++ .+| ..+..+++
T Consensus 267 ~~~~l~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~L~~n~l~-~~~-------------------------~~~~~l~~ 319 (390)
T 3o6n_A 267 PFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-HVE-------------------------RNQPQFDR 319 (390)
T ss_dssp GGTTCSSCCEEECCSSCCCE-EECSSSCCTTCCEEECCSSCCC-CCG-------------------------GGHHHHTT
T ss_pred HccccccCCEEECCCCcCcc-cCcccCCCCCCCEEECCCCcce-ecC-------------------------ccccccCc
Confidence 66666666666666666663 3444555666666666666665 333 34444555
Q ss_pred cceeeeccccccccCCcccccccchhhcccCcccccc
Q 039533 441 LEFLYVYENRLEGEIPSTFGNCIRLEQLGMGGNLFQG 477 (949)
Q Consensus 441 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~ 477 (949)
|+.|+|++|+++.. | +..+++|+.|++++|.++.
T Consensus 320 L~~L~L~~N~i~~~-~--~~~~~~L~~L~l~~N~~~~ 353 (390)
T 3o6n_A 320 LENLYLDHNSIVTL-K--LSTHHTLKNLTLSHNDWDC 353 (390)
T ss_dssp CSEEECCSSCCCCC-C--CCTTCCCSEEECCSSCEEH
T ss_pred CCEEECCCCcccee-C--chhhccCCEEEcCCCCccc
Confidence 55555555555532 2 4455566666666666654
No 166
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.5e-38 Score=344.36 Aligned_cols=266 Identities=23% Similarity=0.343 Sum_probs=205.4
Q ss_pred CCCCCCeeeeecCceEEEEEEcCCC---EEEEEEEEecCCC-cchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCcc
Q 039533 627 GFSSANLVGVGSFGSVYKGIIDEGR---TTIAVKVFNLQHH-GASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDF 702 (949)
Q Consensus 627 ~y~~~~~lg~G~~g~Vy~~~~~~~~---~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 702 (949)
.|.+.++||+|+||+||+|++..++ ..||+|++..... ...+.+.+|+.++++++||||+++++++...+ ..
T Consensus 22 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~----~~ 97 (298)
T 3pls_A 22 VTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPE----GL 97 (298)
T ss_dssp EEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSS----SC
T ss_pred EEccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCC----CC
Confidence 3555689999999999999975443 3799999875433 33467899999999999999999999975433 34
Q ss_pred ceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEE
Q 039533 703 KASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARV 782 (949)
Q Consensus 703 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl 782 (949)
.++||||+.+|+|.+++.. ....+++.++..++.|++.||+|||++ +|+||||||+||+++.++.+||
T Consensus 98 ~~~v~e~~~~~~L~~~~~~---------~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nili~~~~~~kl 165 (298)
T 3pls_A 98 PHVLLPYMCHGDLLQFIRS---------PQRNPTVKDLISFGLQVARGMEYLAEQ---KFVHRDLAARNCMLDESFTVKV 165 (298)
T ss_dssp CEEEECCCTTCBHHHHHHC---------TTCCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEE
T ss_pred cEEEEecccCCCHHHHHhc---------cccCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCcEEe
Confidence 5899999999999999962 235588999999999999999999988 8999999999999999999999
Q ss_pred eecccceecCCCCC--ccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhcccc
Q 039533 783 GDFGLARILSPDHT--QTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKA 860 (949)
Q Consensus 783 ~DfG~a~~~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~ 860 (949)
+|||+++....... ........++..|+|||.+.+..++.++||||||+++|||++|..|+....... ...
T Consensus 166 ~Dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~~-~~~------ 238 (298)
T 3pls_A 166 ADFGLARDILDREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPF-DLT------ 238 (298)
T ss_dssp CCTTSSCTTTTGGGGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCGG-GHH------
T ss_pred CcCCCcccccCCcccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCHH-HHH------
Confidence 99999986544321 111223457899999999999999999999999999999999665543211110 111
Q ss_pred CCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHHhHHhhccCC
Q 039533 861 LPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHELQSIKNILLGVE 939 (949)
Q Consensus 861 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~~~~~~~~ 939 (949)
..+........ ...++..+.+++.+|++.||++|||++|+++.|+++.+.+....
T Consensus 239 ------~~~~~~~~~~~------------------~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~l~~~~ 293 (298)
T 3pls_A 239 ------HFLAQGRRLPQ------------------PEYCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQIVSALLGDH 293 (298)
T ss_dssp ------HHHHTTCCCCC------------------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHCCSCC
T ss_pred ------HHhhcCCCCCC------------------CccchHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHHhccc
Confidence 11100000000 01224568899999999999999999999999999998876553
No 167
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.3e-38 Score=360.51 Aligned_cols=288 Identities=19% Similarity=0.204 Sum_probs=213.0
Q ss_pred cCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCC-CcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCccce
Q 039533 626 SGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQH-HGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFKA 704 (949)
Q Consensus 626 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 704 (949)
++|.+.++||+|+||.||+|++..+++.||||+++... ....+.+.+|++++++++||||+++++++...+ ....+
T Consensus 9 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~---~~~~~ 85 (396)
T 4eut_A 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETT---TRHKV 85 (396)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTT---TCCEE
T ss_pred CceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCC---CCeeE
Confidence 56889999999999999999999889999999997543 233567889999999999999999999976432 33679
Q ss_pred eEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeee----cCCCce
Q 039533 705 SVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLL----DDYMTA 780 (949)
Q Consensus 705 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll----~~~~~~ 780 (949)
+||||+++|+|.+++.... ....+++..++.++.|++.||+|||++ +|+||||||+||++ +.++.+
T Consensus 86 lv~e~~~~g~L~~~l~~~~-------~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~ 155 (396)
T 4eut_A 86 LIMEFCPCGSLYTVLEEPS-------NAYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVY 155 (396)
T ss_dssp EEECCCTTEEHHHHTTSGG-------GTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEECTTSCEEE
T ss_pred EEEecCCCCCHHHHHHhhh-------cccCCCHHHHHHHHHHHHHHHHHHHHC---CEEECCcCHHHEEEeecCCCceeE
Confidence 9999999999999997321 223489999999999999999999988 89999999999999 778889
Q ss_pred EEeecccceecCCCCCccccccccCccCccCccccCC--------CccCCccchHHHHHHHHHHHhCCCCCccccccCch
Q 039533 781 RVGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVG--------CEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDIN 852 (949)
Q Consensus 781 kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~ 852 (949)
||+|||+++........ ....||..|+|||++.+ ..++.++|||||||++|||++|+.||.........
T Consensus 156 kL~DFG~a~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~ 232 (396)
T 4eut_A 156 KLTDFGAARELEDDEQF---VSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRN 232 (396)
T ss_dssp EECCGGGCEECCCGGGS---SCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTC
T ss_pred EEecCCCceEccCCCcc---ccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccch
Confidence 99999999876554322 23569999999998764 56788999999999999999999999643221111
Q ss_pred --hhhhccccCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHH
Q 039533 853 --LHNFGRKALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHELQS 930 (949)
Q Consensus 853 --~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~ 930 (949)
.........+......+......... .... ..............+.+++.+|++.||++||+++|+++.+++
T Consensus 233 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~--~~~~----~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~ 306 (396)
T 4eut_A 233 KEVMYKIITGKPSGAISGVQKAENGPID--WSGD----MPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSD 306 (396)
T ss_dssp HHHHHHHHHSCCTTCCEEEECSTTCCEE--EESS----CCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHH
T ss_pred HHHHHHHhcCCCcccchhheeccCCCcc--cCcc----CCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHH
Confidence 11101111111100000000000000 0000 000001124667788999999999999999999999999998
Q ss_pred hHHhh
Q 039533 931 IKNIL 935 (949)
Q Consensus 931 i~~~~ 935 (949)
+....
T Consensus 307 il~~~ 311 (396)
T 4eut_A 307 ILHRM 311 (396)
T ss_dssp HHTCE
T ss_pred Hhhce
Confidence 86653
No 168
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00 E-value=2.1e-38 Score=341.28 Aligned_cols=250 Identities=24% Similarity=0.366 Sum_probs=181.8
Q ss_pred hcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCC---CcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCc
Q 039533 625 TSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQH---HGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGND 701 (949)
Q Consensus 625 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 701 (949)
.++|.+.+.||+|+||.||+|++..+++.||||++.... ....+.+.+|+.++++++||||+++++++...+
T Consensus 10 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~----- 84 (278)
T 3cok_A 10 IEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSN----- 84 (278)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSS-----
T ss_pred cccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCC-----
Confidence 467999999999999999999998889999999996432 223467899999999999999999999976544
Q ss_pred cceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceE
Q 039533 702 FKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTAR 781 (949)
Q Consensus 702 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~k 781 (949)
..++||||+++++|.+++.. ....+++.++..++.|++.||+|||++ +|+||||||+||+++.++.+|
T Consensus 85 ~~~lv~e~~~~~~L~~~l~~---------~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~k 152 (278)
T 3cok_A 85 YVYLVLEMCHNGEMNRYLKN---------RVKPFSENEARHFMHQIITGMLYLHSH---GILHRDLTLSNLLLTRNMNIK 152 (278)
T ss_dssp EEEEEEECCTTEEHHHHHHT---------CSSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSSCCGGGEEECTTCCEE
T ss_pred eEEEEEecCCCCcHHHHHhh---------ccCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEE
Confidence 78999999999999999962 234689999999999999999999988 999999999999999999999
Q ss_pred EeecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhccccC
Q 039533 782 VGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKAL 861 (949)
Q Consensus 782 l~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~ 861 (949)
|+|||.+.......... ....||+.|+|||++.+..++.++||||||+++|||++|+.||........
T Consensus 153 l~dfg~~~~~~~~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~---------- 220 (278)
T 3cok_A 153 IADFGLATQLKMPHEKH--YTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNT---------- 220 (278)
T ss_dssp ECCCTTCEECC------------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC------------
T ss_pred EEeecceeeccCCCCcc--eeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHH----------
Confidence 99999998765433221 234589999999999988899999999999999999999999964321110
Q ss_pred CCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 039533 862 PDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVH 926 (949)
Q Consensus 862 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 926 (949)
......... ..+ ...+..+.+++.+|++.||++|||++|+++
T Consensus 221 ---~~~~~~~~~-~~~-------------------~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 262 (278)
T 3cok_A 221 ---LNKVVLADY-EMP-------------------SFLSIEAKDLIHQLLRRNPADRLSLSSVLD 262 (278)
T ss_dssp ------CCSSCC-CCC-------------------TTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred ---HHHHhhccc-CCc-------------------cccCHHHHHHHHHHcccCHhhCCCHHHHhc
Confidence 000000000 000 012345789999999999999999999976
No 169
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=1.5e-38 Score=353.78 Aligned_cols=270 Identities=20% Similarity=0.266 Sum_probs=202.9
Q ss_pred HHHHHhcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecC-----CCcchHHHHHHHHHHHhcCCCcceeEEeeeec
Q 039533 620 DLYNATSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQ-----HHGASRSFIAECKALKSIRHRNLVKVLTACLG 694 (949)
Q Consensus 620 ~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~-----~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~ 694 (949)
++....++|++.+.||+|+||.||+|.+..+++.||+|++... .....+.+.+|++++++++||||+++++++..
T Consensus 20 ~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~ 99 (345)
T 3hko_A 20 SLLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYED 99 (345)
T ss_dssp CHHHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEEC
T ss_pred hhhhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhcc
Confidence 3456677899999999999999999999989999999999643 23445789999999999999999999999865
Q ss_pred ccccCCccceeEeeeccCCChhhhcCCCCCCCc------------------------------cccCCCCCCHHHHHHHH
Q 039533 695 ADYRGNDFKASVYEFMHYGSLEEWLHPFTGEDE------------------------------IDEAPRNLNLLQRLNIA 744 (949)
Q Consensus 695 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~------------------------------~~~~~~~l~~~~~~~i~ 744 (949)
.+ ..++||||+++|+|.+++........ .......+++..+..++
T Consensus 100 ~~-----~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 174 (345)
T 3hko_A 100 EQ-----YICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIM 174 (345)
T ss_dssp SS-----EEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHH
T ss_pred CC-----eEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHH
Confidence 44 78999999999999999852111000 00012234677888999
Q ss_pred HHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCC--ceEEeecccceecCCCCC--ccccccccCccCccCccccCC--C
Q 039533 745 IDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYM--TARVGDFGLARILSPDHT--QTSSFSVKGSLGYIAPEYGVG--C 818 (949)
Q Consensus 745 ~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~--~~kl~DfG~a~~~~~~~~--~~~~~~~~gt~~y~aPE~~~~--~ 818 (949)
.|++.||+|||+. +|+||||||+||+++.++ .+||+|||+++....... ........||+.|+|||++.+ .
T Consensus 175 ~qi~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~ 251 (345)
T 3hko_A 175 RQIFSALHYLHNQ---GICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNE 251 (345)
T ss_dssp HHHHHHHHHHHHT---TEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSS
T ss_pred HHHHHHHHHHHHC---CccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCC
Confidence 9999999999988 899999999999998766 899999999987643222 111224569999999999875 5
Q ss_pred ccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhccccCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHH
Q 039533 819 EVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIE 898 (949)
Q Consensus 819 ~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 898 (949)
.++.++|||||||++|||++|+.||......+. ...+......... +....
T Consensus 252 ~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~-------------~~~~~~~~~~~~~----------------~~~~~ 302 (345)
T 3hko_A 252 SYGPKCDAWSAGVLLHLLLMGAVPFPGVNDADT-------------ISQVLNKKLCFEN----------------PNYNV 302 (345)
T ss_dssp CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH-------------HHHHHHCCCCTTS----------------GGGGG
T ss_pred CCCcHHHHHHHHHHHHHHHHCCCCCCCCChHHH-------------HHHHHhcccccCC----------------ccccc
Confidence 788999999999999999999999964322110 1111111111000 00112
Q ss_pred HHHHHHHHhhccccCCCCCCCCHHHHHH
Q 039533 899 CLISMVRIGVACSMELPQDRTNMTNVVH 926 (949)
Q Consensus 899 ~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 926 (949)
.+..+.+++.+|++.||++|||+.|+++
T Consensus 303 ~~~~~~~li~~~l~~~p~~Rps~~~~l~ 330 (345)
T 3hko_A 303 LSPLARDLLSNLLNRNVDERFDAMRALQ 330 (345)
T ss_dssp SCHHHHHHHHHHSCSCTTTSCCHHHHHH
T ss_pred CCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 3456889999999999999999999986
No 170
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=1.4e-38 Score=347.89 Aligned_cols=264 Identities=18% Similarity=0.180 Sum_probs=198.5
Q ss_pred HhcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCCc---chHHHHHHHHHHHhcCCCcceeEEeeeecccccCC
Q 039533 624 ATSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHG---ASRSFIAECKALKSIRHRNLVKVLTACLGADYRGN 700 (949)
Q Consensus 624 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 700 (949)
..++|.+.+.||+|+||.||+|++..+++.||+|++...... ..+.+.+|+.++++++||||+++++++...+
T Consensus 32 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~---- 107 (309)
T 2h34_A 32 QFGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDG---- 107 (309)
T ss_dssp --CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETT----
T ss_pred EeccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCC----
Confidence 357899999999999999999999989999999998754322 2367889999999999999999999976544
Q ss_pred ccceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCce
Q 039533 701 DFKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTA 780 (949)
Q Consensus 701 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~ 780 (949)
..++||||+++++|.+++. ....+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+
T Consensus 108 -~~~lv~e~~~~~~L~~~l~----------~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~NIl~~~~~~~ 173 (309)
T 2h34_A 108 -QLYVDMRLINGVDLAAMLR----------RQGPLAPPRAVAIVRQIGSALDAAHAA---GATHRDVKPENILVSADDFA 173 (309)
T ss_dssp -EEEEEEECCCCEEHHHHHH----------HHCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCE
T ss_pred -eEEEEEEecCCCCHHHHHH----------hcCCCCHHHHHHHHHHHHHHHHHHHHC---cCCcCCCChHHEEEcCCCCE
Confidence 7899999999999999996 234589999999999999999999987 89999999999999999999
Q ss_pred EEeecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhcccc
Q 039533 781 RVGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKA 860 (949)
Q Consensus 781 kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~ 860 (949)
||+|||++.......... .....|++.|+|||++.+..++.++||||||+++|||++|+.||...... .........
T Consensus 174 kl~Dfg~~~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--~~~~~~~~~ 250 (309)
T 2h34_A 174 YLVDFGIASATTDEKLTQ-LGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLS--VMGAHINQA 250 (309)
T ss_dssp EECSCCC-----------------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHH--HHHHHHHSC
T ss_pred EEecCccCcccccccccc-ccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHH--HHHHHhccC
Confidence 999999998765433211 12345899999999999989999999999999999999999999643211 010000000
Q ss_pred CCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCC-CHHHHHHHHHHhHHhhc
Q 039533 861 LPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRT-NMTNVVHELQSIKNILL 936 (949)
Q Consensus 861 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-s~~ev~~~L~~i~~~~~ 936 (949)
.+ .+. ......+..+.+++.+|++.||++|| +++++++.|+++.+...
T Consensus 251 ~~-------------~~~---------------~~~~~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l~~~~ 299 (309)
T 2h34_A 251 IP-------------RPS---------------TVRPGIPVAFDAVIARGMAKNPEDRYVTCGDLSAAAHAALATAD 299 (309)
T ss_dssp CC-------------CGG---------------GTSTTCCTHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHTCC---
T ss_pred CC-------------Ccc---------------ccCCCCCHHHHHHHHHhccCCHHHHHHhHHHHHHHHHHHHHhhc
Confidence 00 000 00012344678999999999999999 99999999998765543
No 171
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00 E-value=5.4e-39 Score=355.56 Aligned_cols=275 Identities=23% Similarity=0.338 Sum_probs=211.1
Q ss_pred HHhcCCCCCCeeeeecCceEEEEEEcCCC-----EEEEEEEEecCCC-cchHHHHHHHHHHHhc-CCCcceeEEeeeecc
Q 039533 623 NATSGFSSANLVGVGSFGSVYKGIIDEGR-----TTIAVKVFNLQHH-GASRSFIAECKALKSI-RHRNLVKVLTACLGA 695 (949)
Q Consensus 623 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~-----~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~ 695 (949)
...++|.+.+.||+|+||.||+|.+..++ +.||+|+++.... ...+.+.+|+.+++++ +||||+++++++...
T Consensus 43 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~ 122 (333)
T 2i1m_A 43 FPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHG 122 (333)
T ss_dssp CCTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred CCHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEecC
Confidence 34578899999999999999999987544 4799999975433 2346789999999999 899999999997654
Q ss_pred cccCCccceeEeeeccCCChhhhcCCCCC----CCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCC
Q 039533 696 DYRGNDFKASVYEFMHYGSLEEWLHPFTG----EDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSN 771 (949)
Q Consensus 696 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~----~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~N 771 (949)
+ ..++||||+++|+|.+++..... ..........+++..+..++.|++.||+|||++ +|+||||||+|
T Consensus 123 ~-----~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~N 194 (333)
T 2i1m_A 123 G-----PVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASK---NCIHRDVAARN 194 (333)
T ss_dssp S-----SCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGG
T ss_pred C-----ceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcC---CcccCCcccce
Confidence 4 78999999999999999863110 000001134589999999999999999999987 99999999999
Q ss_pred eeecCCCceEEeecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHh-CCCCCccccccC
Q 039533 772 VLLDDYMTARVGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVI-GKKPIDIMFEGD 850 (949)
Q Consensus 772 Ill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~ellt-g~~Pf~~~~~~~ 850 (949)
|+++.++.+||+|||+++...............||+.|+|||++.+..++.++|||||||++|||+| |..||.......
T Consensus 195 Il~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~ 274 (333)
T 2i1m_A 195 VLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNS 274 (333)
T ss_dssp CEEEGGGEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSH
T ss_pred EEECCCCeEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchhH
Confidence 9999999999999999987654433322233457889999999988889999999999999999999 999986432111
Q ss_pred chhhhhccccCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHH
Q 039533 851 INLHNFGRKALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHELQS 930 (949)
Q Consensus 851 ~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~ 930 (949)
. ....+........ ...++..+.+++.+||+.||++|||+.||++.|++
T Consensus 275 -~------------~~~~~~~~~~~~~------------------~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~ 323 (333)
T 2i1m_A 275 -K------------FYKLVKDGYQMAQ------------------PAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQE 323 (333)
T ss_dssp -H------------HHHHHHHTCCCCC------------------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred -H------------HHHHHhcCCCCCC------------------CCCCCHHHHHHHHHHhccChhhCcCHHHHHHHHHH
Confidence 0 1111111100000 00124567899999999999999999999999999
Q ss_pred hHHhhc
Q 039533 931 IKNILL 936 (949)
Q Consensus 931 i~~~~~ 936 (949)
+.....
T Consensus 324 ~~~~~~ 329 (333)
T 2i1m_A 324 QAQEDR 329 (333)
T ss_dssp HHHHHH
T ss_pred HHHhhh
Confidence 876543
No 172
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=9.5e-39 Score=357.63 Aligned_cols=212 Identities=28% Similarity=0.325 Sum_probs=181.0
Q ss_pred cccccCHHHHHHHhcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCCcchHHHHHHHHHHHhcC-----CCcce
Q 039533 612 SLLYLSYQDLYNATSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHGASRSFIAECKALKSIR-----HRNLV 686 (949)
Q Consensus 612 ~~~~~~~~~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-----h~niv 686 (949)
....+++.+.....++|.+.++||+|+||.||+|++..+++.||||+++.. ....+.+..|+.+++++. ||||+
T Consensus 21 ~~~~~~~~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~h~~iv 99 (360)
T 3llt_A 21 EIVHFSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNI-KKYTRSAKIEADILKKIQNDDINNNNIV 99 (360)
T ss_dssp GGGSCCCCTTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC-HHHHHHHHHHHHHHHHTCCCSTTGGGBC
T ss_pred cceeeeeecceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccc-hhhhhhhHHHHHHHHHhcccCCCCCCee
Confidence 344555556566678999999999999999999999889999999998632 233466788999999996 99999
Q ss_pred eEEeeeecccccCCccceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecC
Q 039533 687 KVLTACLGADYRGNDFKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCD 766 (949)
Q Consensus 687 ~~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrD 766 (949)
++++++...+ ..++||||+ +++|.+++... ....+++.++..++.|++.||+|||++ +|+|||
T Consensus 100 ~~~~~~~~~~-----~~~lv~e~~-~~~L~~~~~~~--------~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrD 162 (360)
T 3llt_A 100 KYHGKFMYYD-----HMCLIFEPL-GPSLYEIITRN--------NYNGFHIEDIKLYCIEILKALNYLRKM---SLTHTD 162 (360)
T ss_dssp CEEEEEEETT-----EEEEEECCC-CCBHHHHHHHT--------TTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSC
T ss_pred cccceeeECC-----eeEEEEcCC-CCCHHHHHHhc--------CCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCC
Confidence 9999986554 789999999 89999999631 223589999999999999999999987 999999
Q ss_pred CCCCCeeecC-------------------------CCceEEeecccceecCCCCCccccccccCccCccCccccCCCccC
Q 039533 767 LKPSNVLLDD-------------------------YMTARVGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVS 821 (949)
Q Consensus 767 lkp~NIll~~-------------------------~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~ 821 (949)
|||+||+++. ++.+||+|||+|+....... ...||+.|+|||++.+..++
T Consensus 163 lkp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~~-----~~~gt~~y~aPE~~~~~~~~ 237 (360)
T 3llt_A 163 LKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDYHG-----SIINTRQYRAPEVILNLGWD 237 (360)
T ss_dssp CSGGGEEESCTTCCEEEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTSCCC-----SCCSCGGGCCHHHHTTCCCC
T ss_pred CCcccEEEccccccccccchhcccccccccccccCCCCEEEEeccCceecCCCCc-----CccCcccccCcHHHcCCCCC
Confidence 9999999975 78999999999987544322 34589999999999999999
Q ss_pred CccchHHHHHHHHHHHhCCCCCccc
Q 039533 822 TNGDVYSYGILLLELVIGKKPIDIM 846 (949)
Q Consensus 822 ~~sDiwSlGvvl~elltg~~Pf~~~ 846 (949)
.++|||||||++|||++|+.||...
T Consensus 238 ~~~DiwslG~il~ell~g~~pf~~~ 262 (360)
T 3llt_A 238 VSSDMWSFGCVLAELYTGSLLFRTH 262 (360)
T ss_dssp TTHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred CccchHHHHHHHHHHHHCCCCCCCC
Confidence 9999999999999999999999643
No 173
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00 E-value=7.8e-39 Score=345.13 Aligned_cols=261 Identities=22% Similarity=0.367 Sum_probs=203.6
Q ss_pred HhcCCCCCCeeeeecCceEEEEEEcC---CCEEEEEEEEecCCC-cchHHHHHHHHHHHhcCCCcceeEEeeeecccccC
Q 039533 624 ATSGFSSANLVGVGSFGSVYKGIIDE---GRTTIAVKVFNLQHH-GASRSFIAECKALKSIRHRNLVKVLTACLGADYRG 699 (949)
Q Consensus 624 ~~~~y~~~~~lg~G~~g~Vy~~~~~~---~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 699 (949)
..++|.+.+.||+|+||.||+|++.. .+..||+|+++.... ...+.+.+|+.++++++||||+++++++...
T Consensus 10 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~---- 85 (281)
T 3cc6_A 10 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEEE---- 85 (281)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECSS----
T ss_pred cccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcCC----
Confidence 34678999999999999999999753 235699999875432 3456789999999999999999999986432
Q ss_pred CccceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCc
Q 039533 700 NDFKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMT 779 (949)
Q Consensus 700 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~ 779 (949)
..++||||+++++|.+++.. ....+++..+..++.|++.||+|||++ +|+||||||+||+++.++.
T Consensus 86 --~~~~v~e~~~~~~L~~~l~~---------~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~ 151 (281)
T 3cc6_A 86 --PTWIIMELYPYGELGHYLER---------NKNSLKVLTLVLYSLQICKAMAYLESI---NCVHRDIAVRNILVASPEC 151 (281)
T ss_dssp --SCEEEEECCTTCBHHHHHHH---------HTTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEEETTE
T ss_pred --CCEEEEecCCCCCHHHHHHh---------ccccCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCccceEEECCCCc
Confidence 46899999999999999962 234589999999999999999999987 9999999999999999999
Q ss_pred eEEeecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHh-CCCCCccccccCchhhhhcc
Q 039533 780 ARVGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVI-GKKPIDIMFEGDINLHNFGR 858 (949)
Q Consensus 780 ~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~ellt-g~~Pf~~~~~~~~~~~~~~~ 858 (949)
+||+|||.++......... .....+++.|+|||++.+..++.++||||||+++|||++ |+.||....... ......
T Consensus 152 ~kl~Dfg~~~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~--~~~~~~ 228 (281)
T 3cc6_A 152 VKLGDFGLSRYIEDEDYYK-ASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKD--VIGVLE 228 (281)
T ss_dssp EEECCCCGGGCC----------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGG--HHHHHH
T ss_pred EEeCccCCCcccccccccc-cccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChHH--HHHHHh
Confidence 9999999998765433221 123447889999999988889999999999999999998 999996332211 000000
Q ss_pred ccCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHHhHHhh
Q 039533 859 KALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHELQSIKNIL 935 (949)
Q Consensus 859 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~~~~ 935 (949)
.....+.+ ..++..+.+++.+|++.||++|||+.|+++.|+++.+..
T Consensus 229 -----------~~~~~~~~-------------------~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~~ 275 (281)
T 3cc6_A 229 -----------KGDRLPKP-------------------DLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDVYQME 275 (281)
T ss_dssp -----------HTCCCCCC-------------------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred -----------cCCCCCCC-------------------CCCCHHHHHHHHHHccCCchhCcCHHHHHHHHHHHHHhh
Confidence 00000000 123456889999999999999999999999999987654
No 174
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00 E-value=3.8e-38 Score=340.21 Aligned_cols=259 Identities=20% Similarity=0.254 Sum_probs=204.0
Q ss_pred cCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCC------cchHHHHHHHHHHHhcCCCcceeEEeeeecccccC
Q 039533 626 SGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHH------GASRSFIAECKALKSIRHRNLVKVLTACLGADYRG 699 (949)
Q Consensus 626 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~------~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 699 (949)
++|++.+.||+|+||.||+|++..+++.||+|+++.... ...+.+.+|+.++++++||||+++++++....
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--- 81 (283)
T 3bhy_A 5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKT--- 81 (283)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSS---
T ss_pred hhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCC---
Confidence 468899999999999999999998899999999975432 13567999999999999999999999976544
Q ss_pred CccceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCC-
Q 039533 700 NDFKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYM- 778 (949)
Q Consensus 700 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~- 778 (949)
..++||||+++++|.+++. ....+++.++..++.|++.||+|||++ +|+||||||+||+++.++
T Consensus 82 --~~~lv~e~~~~~~L~~~l~----------~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~ 146 (283)
T 3bhy_A 82 --DVVLILELVSGGELFDFLA----------EKESLTEDEATQFLKQILDGVHYLHSK---RIAHFDLKPENIMLLDKNV 146 (283)
T ss_dssp --EEEEEEECCCSCBHHHHHH----------HHSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSS
T ss_pred --eEEEEEeecCCCcHHHHHH----------hcCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChHHEEEecCCC
Confidence 7899999999999999996 234689999999999999999999987 999999999999998877
Q ss_pred ---ceEEeecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhh
Q 039533 779 ---TARVGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHN 855 (949)
Q Consensus 779 ---~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~ 855 (949)
.+||+|||.+.......... ...|++.|+|||++.+..++.++||||||+++|||++|+.||....... ..
T Consensus 147 ~~~~~kl~dfg~~~~~~~~~~~~---~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-~~-- 220 (283)
T 3bhy_A 147 PNPRIKLIDFGIAHKIEAGNEFK---NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQE-TL-- 220 (283)
T ss_dssp SSCCEEECCCTTCEECC-----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHHH-HH--
T ss_pred CCCceEEEecccceeccCCCccc---ccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchHH-HH--
Confidence 89999999998765443222 3458999999999998899999999999999999999999996432110 00
Q ss_pred hccccCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH--HHHHhHH
Q 039533 856 FGRKALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVH--ELQSIKN 933 (949)
Q Consensus 856 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~--~L~~i~~ 933 (949)
..+....... +. ......+..+.+++.+|++.||++|||+.|+++ .++.++.
T Consensus 221 ----------~~~~~~~~~~-~~---------------~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~~ 274 (283)
T 3bhy_A 221 ----------TNISAVNYDF-DE---------------EYFSNTSELAKDFIRRLLVKDPKRRMTIAQSLEHSWIKAIRR 274 (283)
T ss_dssp ----------HHHHTTCCCC-CH---------------HHHTTCCHHHHHHHHTTSCSSGGGSCCHHHHHHCHHHHHHHH
T ss_pred ----------HHhHhcccCC-cc---------------hhcccCCHHHHHHHHHHccCCHhHCcCHHHHHhCHHHHHHHH
Confidence 0000000000 00 011133456889999999999999999999997 4555544
Q ss_pred h
Q 039533 934 I 934 (949)
Q Consensus 934 ~ 934 (949)
.
T Consensus 275 ~ 275 (283)
T 3bhy_A 275 R 275 (283)
T ss_dssp C
T ss_pred H
Confidence 3
No 175
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00 E-value=3.2e-38 Score=359.57 Aligned_cols=254 Identities=20% Similarity=0.240 Sum_probs=192.9
Q ss_pred HHhcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCC--------cchHHHHHHHHHHHhcCCCcceeEEeeeec
Q 039533 623 NATSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHH--------GASRSFIAECKALKSIRHRNLVKVLTACLG 694 (949)
Q Consensus 623 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--------~~~~~~~~E~~~l~~l~h~niv~~~~~~~~ 694 (949)
...++|.+.+.||+|+||.||+|.+..+++.||||++..... .....+.+|++++++++||||+++++++..
T Consensus 132 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~ 211 (419)
T 3i6u_A 132 ALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA 211 (419)
T ss_dssp HHHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEES
T ss_pred hhhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEec
Confidence 345789999999999999999999999999999999974321 112357899999999999999999998642
Q ss_pred ccccCCccceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeee
Q 039533 695 ADYRGNDFKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLL 774 (949)
Q Consensus 695 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll 774 (949)
. ..++||||+++|+|.+++. ....+++.++..++.|++.||+|||++ +|+||||||+||++
T Consensus 212 ~------~~~lv~e~~~~g~L~~~l~----------~~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~NIll 272 (419)
T 3i6u_A 212 E------DYYIVLELMEGGELFDKVV----------GNKRLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLL 272 (419)
T ss_dssp S------EEEEEEECCTTCBGGGGTS----------SSCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEE
T ss_pred C------ceEEEEEcCCCCcHHHHHh----------ccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEE
Confidence 2 4689999999999999986 235689999999999999999999987 89999999999999
Q ss_pred cCC---CceEEeecccceecCCCCCccccccccCccCccCccccCC---CccCCccchHHHHHHHHHHHhCCCCCccccc
Q 039533 775 DDY---MTARVGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVG---CEVSTNGDVYSYGILLLELVIGKKPIDIMFE 848 (949)
Q Consensus 775 ~~~---~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~ 848 (949)
+.+ +.+||+|||+|+........ ....||+.|+|||++.+ ..++.++|||||||++|||++|+.||.....
T Consensus 273 ~~~~~~~~~kl~DFG~a~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~ 349 (419)
T 3i6u_A 273 SSQEEDCLIKITDFGHSKILGETSLM---RTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRT 349 (419)
T ss_dssp SSSSSSCCEEECCSSTTTSCC--------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSS
T ss_pred ecCCCcceEEEeecccceecCCCccc---cccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcc
Confidence 754 45999999999876543322 23569999999999864 5678899999999999999999999964322
Q ss_pred cCchhhhhccccCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 039533 849 GDINLHNFGRKALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVH 926 (949)
Q Consensus 849 ~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 926 (949)
... ..+.+......... +.....+..+.+++.+|++.||++|||++|+++
T Consensus 350 ~~~-------------~~~~i~~~~~~~~~---------------~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~ 399 (419)
T 3i6u_A 350 QVS-------------LKDQITSGKYNFIP---------------EVWAEVSEKALDLVKKLLVVDPKARFTTEEALR 399 (419)
T ss_dssp SCC-------------HHHHHHTTCCCCCH---------------HHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred hHH-------------HHHHHhcCCCCCCc---------------hhhcccCHHHHHHHHHHccCChhHCcCHHHHhC
Confidence 111 11111100000000 011133567889999999999999999999986
No 176
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00 E-value=7e-38 Score=348.06 Aligned_cols=277 Identities=22% Similarity=0.313 Sum_probs=210.7
Q ss_pred HHHHHHHhcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCCcchHHHHHHHHHHHh--cCCCcceeEEeeeecc
Q 039533 618 YQDLYNATSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHGASRSFIAECKALKS--IRHRNLVKVLTACLGA 695 (949)
Q Consensus 618 ~~~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~~~~~~~~~ 695 (949)
...-....++|.+.+.||+|+||.||+|++. ++.||||+++.. ..+.+.+|++++.. ++||||+++++++...
T Consensus 34 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~--~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~ 108 (342)
T 1b6c_B 34 LLVQRTIARTIVLQESIGKGRFGEVWRGKWR--GEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKD 108 (342)
T ss_dssp HHHHHHHHHHCEEEEEEEEETTEEEEEEEET--TEEEEEEEECGG---GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECC
T ss_pred eeecccccccEEEEeeecCCCCcEEEEEEEc--CccEEEEEeCch---hHHHHHHHHHHHHHhhcCCCcEEEEEeeeccc
Confidence 3333445678999999999999999999985 899999998643 34677889999888 6899999999997654
Q ss_pred cccCCccceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHh--------hCCCCCeEecCC
Q 039533 696 DYRGNDFKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLH--------HDCQPVTAHCDL 767 (949)
Q Consensus 696 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH--------~~~~~~ivHrDl 767 (949)
. ......++||||+++|+|.+++. ...+++.+++.++.|++.||+||| +. +|+||||
T Consensus 109 ~-~~~~~~~lv~e~~~~g~L~~~l~-----------~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dl 173 (342)
T 1b6c_B 109 N-GTWTQLWLVSDYHEHGSLFDYLN-----------RYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKP---AIAHRDL 173 (342)
T ss_dssp C-SSCCCEEEEECCCTTCBHHHHHH-----------HCCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBC---EEECSCC
T ss_pred C-CccceeEEEEeecCCCcHHHHHh-----------ccCccHHHHHHHHHHHHHHHHHHHHHHhhhcccC---CeeeCCC
Confidence 3 12236899999999999999996 235899999999999999999999 55 8999999
Q ss_pred CCCCeeecCCCceEEeecccceecCCCCCcc--ccccccCccCccCccccCCC------ccCCccchHHHHHHHHHHHhC
Q 039533 768 KPSNVLLDDYMTARVGDFGLARILSPDHTQT--SSFSVKGSLGYIAPEYGVGC------EVSTNGDVYSYGILLLELVIG 839 (949)
Q Consensus 768 kp~NIll~~~~~~kl~DfG~a~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~------~~~~~sDiwSlGvvl~elltg 839 (949)
||+||+++.++.+||+|||+++......... ......||+.|+|||++.+. .++.++|||||||++|||+||
T Consensus 174 kp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg 253 (342)
T 1b6c_B 174 KSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARR 253 (342)
T ss_dssp SGGGEEECTTSCEEECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CHHHEEECCCCCEEEEECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhc
Confidence 9999999999999999999998775544321 12244699999999998765 344789999999999999999
Q ss_pred ----------CCCCccccccCchhhhhccccCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhc
Q 039533 840 ----------KKPIDIMFEGDINLHNFGRKALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVA 909 (949)
Q Consensus 840 ----------~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~ 909 (949)
+.||............+.. .+......+...+ ++ ...+++..+.+++.+
T Consensus 254 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~------------~~-~~~~~~~~l~~li~~ 312 (342)
T 1b6c_B 254 CSIGGIHEDYQLPYYDLVPSDPSVEEMRK--------VVCEQKLRPNIPN------------RW-QSCEALRVMAKIMRE 312 (342)
T ss_dssp BCBTTBCCCCCCTTTTTSCSSCCHHHHHH--------HHTTSCCCCCCCG------------GG-GTSHHHHHHHHHHHH
T ss_pred cCcCCcccccccCccccCcCcccHHHHHH--------HHHHHHhCCCCcc------------cc-cchhHHHHHHHHHHH
Confidence 5666433222111111110 1111111111110 00 012567789999999
Q ss_pred cccCCCCCCCCHHHHHHHHHHhHHhh
Q 039533 910 CSMELPQDRTNMTNVVHELQSIKNIL 935 (949)
Q Consensus 910 cl~~dP~~RPs~~ev~~~L~~i~~~~ 935 (949)
||+.||++|||+.||++.|+++.+..
T Consensus 313 cl~~dp~~Rps~~~i~~~L~~i~~~~ 338 (342)
T 1b6c_B 313 CWYANGAARLTALRIKKTLSQLSQQE 338 (342)
T ss_dssp HCCSSGGGSCCHHHHHHHHHHHHHTT
T ss_pred HhccChhhCCCHHHHHHHHHHHHHHh
Confidence 99999999999999999999998764
No 177
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.5e-38 Score=351.38 Aligned_cols=263 Identities=23% Similarity=0.419 Sum_probs=200.3
Q ss_pred cCCCCCCeeeeecCceEEEEEEcCC----CEEEEEEEEecCCC-cchHHHHHHHHHHHhcCCCcceeEEeeeecccccCC
Q 039533 626 SGFSSANLVGVGSFGSVYKGIIDEG----RTTIAVKVFNLQHH-GASRSFIAECKALKSIRHRNLVKVLTACLGADYRGN 700 (949)
Q Consensus 626 ~~y~~~~~lg~G~~g~Vy~~~~~~~----~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 700 (949)
++|++.+.||+|+||.||+|.+..+ +..||||+++.... .....+.+|+.++++++||||+++++++...+
T Consensus 44 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~---- 119 (333)
T 1mqb_A 44 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYK---- 119 (333)
T ss_dssp TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSS----
T ss_pred HHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCC----
Confidence 4677789999999999999998644 34699999975433 23457889999999999999999999975443
Q ss_pred ccceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCce
Q 039533 701 DFKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTA 780 (949)
Q Consensus 701 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~ 780 (949)
..++||||+++++|.+++.. ....+++.+++.++.|++.||+|||++ +|+||||||+||+++.++.+
T Consensus 120 -~~~lv~e~~~~~~L~~~l~~---------~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~ 186 (333)
T 1mqb_A 120 -PMMIITEYMENGALDKFLRE---------KDGEFSVLQLVGMLRGIAAGMKYLANM---NYVHRDLAARNILVNSNLVC 186 (333)
T ss_dssp -SEEEEEECCTTEEHHHHHHH---------TTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCE
T ss_pred -CcEEEEeCCCCCcHHHHHHh---------CCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChheEEECCCCcE
Confidence 78999999999999999962 234689999999999999999999988 89999999999999999999
Q ss_pred EEeecccceecCCCCCcc-ccccccCccCccCccccCCCccCCccchHHHHHHHHHHHh-CCCCCccccccCchhhhhcc
Q 039533 781 RVGDFGLARILSPDHTQT-SSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVI-GKKPIDIMFEGDINLHNFGR 858 (949)
Q Consensus 781 kl~DfG~a~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~ellt-g~~Pf~~~~~~~~~~~~~~~ 858 (949)
||+|||.++......... ......+|..|+|||++.+..++.++|||||||++|||++ |+.||....... ...
T Consensus 187 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~--~~~--- 261 (333)
T 1mqb_A 187 KVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHE--VMK--- 261 (333)
T ss_dssp EECCCCC-----------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH--HHH---
T ss_pred EECCCCcchhhccccccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCHHH--HHH---
Confidence 999999998765443211 1112346788999999998899999999999999999999 999995332110 000
Q ss_pred ccCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHHhHHhhcc
Q 039533 859 KALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHELQSIKNILLG 937 (949)
Q Consensus 859 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~~~~~~ 937 (949)
.+.+....+.+ ..++..+.+++.+||+.||++||++.|+++.|+++......
T Consensus 262 --------~~~~~~~~~~~-------------------~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~~~~ 313 (333)
T 1mqb_A 262 --------AINDGFRLPTP-------------------MDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRAPDS 313 (333)
T ss_dssp --------HHHTTCCCCCC-------------------TTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHSGGG
T ss_pred --------HHHCCCcCCCc-------------------ccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhcchh
Confidence 00000000000 12345688999999999999999999999999998766544
No 178
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=8.1e-39 Score=361.69 Aligned_cols=206 Identities=24% Similarity=0.340 Sum_probs=165.1
Q ss_pred HHhcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCC--CcchHHHHHHHHHHHhcC-CCcceeEEeeeecccccC
Q 039533 623 NATSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQH--HGASRSFIAECKALKSIR-HRNLVKVLTACLGADYRG 699 (949)
Q Consensus 623 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~ 699 (949)
...++|++.+.||+|+||.||+|.+..+++.||||++.... ....+++.+|+.+++++. ||||+++++++... +
T Consensus 6 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~---~ 82 (388)
T 3oz6_A 6 HVLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRAD---N 82 (388)
T ss_dssp HHHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECT---T
T ss_pred cccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecC---C
Confidence 34578999999999999999999999999999999986432 233467889999999997 99999999998643 2
Q ss_pred CccceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCc
Q 039533 700 NDFKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMT 779 (949)
Q Consensus 700 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~ 779 (949)
....++||||++ ++|.+++. ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.
T Consensus 83 ~~~~~lv~e~~~-~~L~~~~~-----------~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~ 147 (388)
T 3oz6_A 83 DRDVYLVFDYME-TDLHAVIR-----------ANILEPVHKQYVVYQLIKVIKYLHSG---GLLHRDMKPSNILLNAECH 147 (388)
T ss_dssp SSCEEEEEECCS-EEHHHHHH-----------HTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCC
T ss_pred CCEEEEEecccC-cCHHHHHH-----------cCCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHeEEcCCCC
Confidence 346899999997 58999886 23588999999999999999999988 9999999999999999999
Q ss_pred eEEeecccceecCCCCC-------------------ccccccccCccCccCccccCC-CccCCccchHHHHHHHHHHHhC
Q 039533 780 ARVGDFGLARILSPDHT-------------------QTSSFSVKGSLGYIAPEYGVG-CEVSTNGDVYSYGILLLELVIG 839 (949)
Q Consensus 780 ~kl~DfG~a~~~~~~~~-------------------~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDiwSlGvvl~elltg 839 (949)
+||+|||+|+....... ........||+.|+|||++.+ ..++.++||||+||++|||++|
T Consensus 148 ~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g 227 (388)
T 3oz6_A 148 VKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCG 227 (388)
T ss_dssp EEECCCTTCEESSSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHS
T ss_pred EEecCCcccccccccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhC
Confidence 99999999987643111 111123569999999999876 5789999999999999999999
Q ss_pred CCCCccc
Q 039533 840 KKPIDIM 846 (949)
Q Consensus 840 ~~Pf~~~ 846 (949)
++||...
T Consensus 228 ~~pf~~~ 234 (388)
T 3oz6_A 228 KPIFPGS 234 (388)
T ss_dssp SCSCCCS
T ss_pred CCCCCCC
Confidence 9999643
No 179
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00 E-value=1.4e-38 Score=349.60 Aligned_cols=265 Identities=22% Similarity=0.272 Sum_probs=197.7
Q ss_pred cCCCCC-CeeeeecCceEEEEEEcCCCEEEEEEEEecCCCcchHHHHHHHHHHHhc-CCCcceeEEeeeecccccCCccc
Q 039533 626 SGFSSA-NLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHGASRSFIAECKALKSI-RHRNLVKVLTACLGADYRGNDFK 703 (949)
Q Consensus 626 ~~y~~~-~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~ 703 (949)
+.|.+. +.||+|+||.||+|++..+++.||||+++.......+.+.+|++++.++ +||||+++++++...+ ..
T Consensus 12 ~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~-----~~ 86 (316)
T 2ac3_A 12 DVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEED-----RF 86 (316)
T ss_dssp TSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETT-----EE
T ss_pred eeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCC-----EE
Confidence 567774 7899999999999999888999999999876655667899999999995 7999999999976544 78
Q ss_pred eeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCc---e
Q 039533 704 ASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMT---A 780 (949)
Q Consensus 704 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~---~ 780 (949)
++||||+++++|.+++. ....+++.++..++.|++.||+|||++ +|+||||||+||+++.++. +
T Consensus 87 ~lv~e~~~~~~L~~~l~----------~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~~~ 153 (316)
T 2ac3_A 87 YLVFEKMRGGSILSHIH----------KRRHFNELEASVVVQDVASALDFLHNK---GIAHRDLKPENILCEHPNQVSPV 153 (316)
T ss_dssp EEEEECCTTCBHHHHHH----------HHSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESCSSSSCSE
T ss_pred EEEEEcCCCCcHHHHHh----------ccCCCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEEccCCCcCce
Confidence 99999999999999996 234689999999999999999999988 9999999999999998776 9
Q ss_pred EEeecccceecCCCCC-----ccccccccCccCccCccccCC-----CccCCccchHHHHHHHHHHHhCCCCCccccccC
Q 039533 781 RVGDFGLARILSPDHT-----QTSSFSVKGSLGYIAPEYGVG-----CEVSTNGDVYSYGILLLELVIGKKPIDIMFEGD 850 (949)
Q Consensus 781 kl~DfG~a~~~~~~~~-----~~~~~~~~gt~~y~aPE~~~~-----~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~ 850 (949)
||+|||+++....... ........||+.|+|||++.+ ..++.++|||||||++|||++|+.||......+
T Consensus 154 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~ 233 (316)
T 2ac3_A 154 KICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSD 233 (316)
T ss_dssp EECCTTCCC-------------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSC
T ss_pred EEEEccCccccccCCccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCccccccc
Confidence 9999999976543221 111123459999999999875 468899999999999999999999997543222
Q ss_pred chhhhhccccC-C---CchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 039533 851 INLHNFGRKAL-P---DDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVH 926 (949)
Q Consensus 851 ~~~~~~~~~~~-~---~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 926 (949)
... ..... + ....+.+.......+ . ......+..+.+++.+|++.||++|||++|+++
T Consensus 234 ~~~---~~~~~~~~~~~~~~~~i~~~~~~~~------------~---~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~ 295 (316)
T 2ac3_A 234 CGW---DRGEACPACQNMLFESIQEGKYEFP------------D---KDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQ 295 (316)
T ss_dssp SCC-------CCHHHHHHHHHHHHHCCCCCC------------H---HHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred ccc---cccccchhHHHHHHHHHhccCcccC------------c---hhcccCCHHHHHHHHHHhhCChhhCCCHHHHhc
Confidence 110 00000 0 000000000000000 0 001134567899999999999999999999987
No 180
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3e-38 Score=341.65 Aligned_cols=264 Identities=22% Similarity=0.354 Sum_probs=209.1
Q ss_pred cCCCCCC-eeeeecCceEEEEEEc--CCCEEEEEEEEecCCC-cchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCc
Q 039533 626 SGFSSAN-LVGVGSFGSVYKGIID--EGRTTIAVKVFNLQHH-GASRSFIAECKALKSIRHRNLVKVLTACLGADYRGND 701 (949)
Q Consensus 626 ~~y~~~~-~lg~G~~g~Vy~~~~~--~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 701 (949)
++|.+.+ .||+|+||.||+|.+. .+++.||||+++.... ...+.+.+|++++++++||||+++++++.. +
T Consensus 9 ~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~------~ 82 (287)
T 1u59_A 9 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA------E 82 (287)
T ss_dssp GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEES------S
T ss_pred HHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEecC------C
Confidence 4555665 8999999999999863 4678899999976432 345678999999999999999999999732 2
Q ss_pred cceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceE
Q 039533 702 FKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTAR 781 (949)
Q Consensus 702 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~k 781 (949)
..++||||+++++|.+++.. ....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+|
T Consensus 83 ~~~lv~e~~~~~~L~~~l~~---------~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~k 150 (287)
T 1u59_A 83 ALMLVMEMAGGGPLHKFLVG---------KREEIPVSNVAELLHQVSMGMKYLEEK---NFVHRDLAARNVLLVNRHYAK 150 (287)
T ss_dssp SEEEEEECCTTEEHHHHHTT---------CTTTSCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEEETTEEE
T ss_pred CcEEEEEeCCCCCHHHHHHh---------CCccCCHHHHHHHHHHHHHHHHHHHHC---CEeeCCCchheEEEcCCCCEE
Confidence 58999999999999999962 234589999999999999999999987 999999999999999999999
Q ss_pred EeecccceecCCCCCcc-ccccccCccCccCccccCCCccCCccchHHHHHHHHHHHh-CCCCCccccccCchhhhhccc
Q 039533 782 VGDFGLARILSPDHTQT-SSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVI-GKKPIDIMFEGDINLHNFGRK 859 (949)
Q Consensus 782 l~DfG~a~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~ellt-g~~Pf~~~~~~~~~~~~~~~~ 859 (949)
|+|||+++......... ......+|+.|+|||++.+..++.++||||||+++|||++ |+.||...... .....
T Consensus 151 l~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~--~~~~~--- 225 (287)
T 1u59_A 151 ISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGP--EVMAF--- 225 (287)
T ss_dssp ECCCTTCEECTTCSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTH--HHHHH---
T ss_pred ECcccceeeeccCcceeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHH--HHHHH---
Confidence 99999999876543321 1223346889999999988889999999999999999998 99999643211 11111
Q ss_pred cCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHHhHHhhccCC
Q 039533 860 ALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHELQSIKNILLGVE 939 (949)
Q Consensus 860 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~~~~~~~~ 939 (949)
+........ ...++..+.+++.+||+.||++||++.|+++.|+++..+.....
T Consensus 226 ---------i~~~~~~~~------------------~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~~~~ 278 (287)
T 1u59_A 226 ---------IEQGKRMEC------------------PPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLASKV 278 (287)
T ss_dssp ---------HHTTCCCCC------------------CTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHHHTTC
T ss_pred ---------HhcCCcCCC------------------CCCcCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcCCcc
Confidence 000000000 01334578899999999999999999999999999988866553
No 181
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=5e-40 Score=358.71 Aligned_cols=277 Identities=21% Similarity=0.288 Sum_probs=190.8
Q ss_pred hcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCCcchHHHHHHHHHHHh--cCCCcceeEEeeeecccccCCcc
Q 039533 625 TSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHGASRSFIAECKALKS--IRHRNLVKVLTACLGADYRGNDF 702 (949)
Q Consensus 625 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~~~~~~~~~~~~~~~~ 702 (949)
.++|.+.+.||+|+||.||+|++. ++.||||+++.. ....+.+|.+++.. ++||||+++++++.... .....
T Consensus 2 ~~~y~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~-~~~~~ 75 (303)
T 3gxj_A 2 ARTIVLQESIGKGRFGEVWRGKWR--GEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDN-GTWTQ 75 (303)
T ss_dssp GGGCCCCEEEEECSSSEEEEC-CT--TSCEEEEECC-T---THHHHHHHHHHHTSTTCCC-CBCCEEEEEEEEC-SSSEE
T ss_pred cceeeehhhccCCCCeEEEEEEEc--CcceEEEEeccc---chhhHHHHHHHHHHHhccCcceeeeeeecccCC-Cccce
Confidence 357999999999999999999875 789999998643 34567788888887 78999999999976543 12235
Q ss_pred ceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHh--------hCCCCCeEecCCCCCCeee
Q 039533 703 KASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLH--------HDCQPVTAHCDLKPSNVLL 774 (949)
Q Consensus 703 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH--------~~~~~~ivHrDlkp~NIll 774 (949)
.++||||+++|+|.+++.. ..+++..+..++.|++.||+||| +. +|+||||||+||++
T Consensus 76 ~~lv~e~~~~g~L~~~l~~-----------~~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~Nil~ 141 (303)
T 3gxj_A 76 LWLVSDYHEHGSLFDYLNR-----------YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKP---AIAHRDLKSKNILV 141 (303)
T ss_dssp EEEEEECCTTCCHHHHHHH-----------CCBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC----CCCSCCCGGGC-C
T ss_pred eEEEEeccCCCCHHHHHhc-----------cCcchHHHHHHHHHHHHHHHHHHHHHhhhccCC---CEeeCcCCHHHeEE
Confidence 7999999999999999962 34777889999999999999999 55 99999999999999
Q ss_pred cCCCceEEeecccceecCCCCCcc--ccccccCccCccCccccCCC------ccCCccchHHHHHHHHHHHhCCCCCccc
Q 039533 775 DDYMTARVGDFGLARILSPDHTQT--SSFSVKGSLGYIAPEYGVGC------EVSTNGDVYSYGILLLELVIGKKPIDIM 846 (949)
Q Consensus 775 ~~~~~~kl~DfG~a~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~------~~~~~sDiwSlGvvl~elltg~~Pf~~~ 846 (949)
+.++.+||+|||+++......... ......||+.|+|||++.+. .++.++|||||||++|||++|..|+...
T Consensus 142 ~~~~~~kl~DFg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~ 221 (303)
T 3gxj_A 142 KKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIH 221 (303)
T ss_dssp CTTCCC-BCCCCC-CCEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGGBCBTTBC
T ss_pred CCCCCEEEeecCcceeccCCCcccccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHHhcCCCcccc
Confidence 999999999999997765443321 11234699999999998776 4557899999999999999995554322
Q ss_pred cccCchhhhhcc--ccCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHH
Q 039533 847 FEGDINLHNFGR--KALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNV 924 (949)
Q Consensus 847 ~~~~~~~~~~~~--~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev 924 (949)
......+..... .........+......+...+. +. ..+++..+.+++.+||+.||++|||++||
T Consensus 222 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~-~~~~~~~l~~li~~cl~~dP~~Rps~~~i 288 (303)
T 3gxj_A 222 EDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNR------------WQ-SCEALRVMAKIMRECWYANGAARLTALRI 288 (303)
T ss_dssp -CCCCTTTTTCC-CCCCC-CHHHHTTSCCCCCCCGG------------GG-SSHHHHHHHHHHHTTCCSSGGGSCCHHHH
T ss_pred ceeeccccccCCCCccHHHHHHHHHHhhcCCCcccc------------cc-chhhHHHHHHHHHHHhccCcccCCCHHHH
Confidence 111111100000 0001111122222222222111 10 12566789999999999999999999999
Q ss_pred HHHHHHhHHh
Q 039533 925 VHELQSIKNI 934 (949)
Q Consensus 925 ~~~L~~i~~~ 934 (949)
++.|+++.+.
T Consensus 289 ~~~L~~l~~~ 298 (303)
T 3gxj_A 289 KKTLSQLSQQ 298 (303)
T ss_dssp HHHHHC-CCC
T ss_pred HHHHHHhhhh
Confidence 9999998654
No 182
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00 E-value=2.3e-38 Score=346.55 Aligned_cols=245 Identities=23% Similarity=0.223 Sum_probs=191.4
Q ss_pred cCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCCc--chHHHHHHHHHHHhc-CCCcceeEEeeeecccccCCcc
Q 039533 626 SGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHG--ASRSFIAECKALKSI-RHRNLVKVLTACLGADYRGNDF 702 (949)
Q Consensus 626 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~ 702 (949)
++|++.++||+|+||+||+|++..+++.||||++...... ...+...|+..+.++ +||||+++++++...+ .
T Consensus 57 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~-----~ 131 (311)
T 3p1a_A 57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGG-----I 131 (311)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETT-----E
T ss_pred hheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCC-----E
Confidence 4689999999999999999999989999999998654332 233455666666665 8999999999986544 7
Q ss_pred ceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEE
Q 039533 703 KASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARV 782 (949)
Q Consensus 703 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl 782 (949)
.++||||+ +++|.+++.. ....+++..+..|+.|++.||+|||+. +|+||||||+||+++.++.+||
T Consensus 132 ~~lv~e~~-~~~L~~~~~~---------~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl 198 (311)
T 3p1a_A 132 LYLQTELC-GPSLQQHCEA---------WGASLPEAQVWGYLRDTLLALAHLHSQ---GLVHLDVKPANIFLGPRGRCKL 198 (311)
T ss_dssp EEEEEECC-CCBHHHHHHH---------HCSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECGGGCEEE
T ss_pred EEEEEecc-CCCHHHHHHh---------cCCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEECCCCCEEE
Confidence 89999999 6799998862 234699999999999999999999987 8999999999999999999999
Q ss_pred eecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhccccCC
Q 039533 783 GDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKALP 862 (949)
Q Consensus 783 ~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~ 862 (949)
+|||+++........ ....||+.|+|||++.+ .++.++|||||||++|||++|..|+.... ...
T Consensus 199 ~DFG~a~~~~~~~~~---~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~~----~~~-------- 262 (311)
T 3p1a_A 199 GDFGLLVELGTAGAG---EVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGGE----GWQ-------- 262 (311)
T ss_dssp CCCTTCEECC---------CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSHH----HHH--------
T ss_pred ccceeeeecccCCCC---cccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCcc----HHH--------
Confidence 999999876544322 23459999999999876 78999999999999999999977653210 000
Q ss_pred CchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 039533 863 DDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVH 926 (949)
Q Consensus 863 ~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 926 (949)
.+...... . ......+..+.+++.+|++.||++|||++|+++
T Consensus 263 ----~~~~~~~~---~---------------~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~ 304 (311)
T 3p1a_A 263 ----QLRQGYLP---P---------------EFTAGLSSELRSVLVMMLEPDPKLRATAEALLA 304 (311)
T ss_dssp ----HHTTTCCC---H---------------HHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred ----HHhccCCC---c---------------ccccCCCHHHHHHHHHHcCCChhhCcCHHHHHh
Confidence 00000000 0 001133567899999999999999999999985
No 183
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00 E-value=1.2e-38 Score=343.33 Aligned_cols=249 Identities=21% Similarity=0.301 Sum_probs=199.3
Q ss_pred HhcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCC---CcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCC
Q 039533 624 ATSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQH---HGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGN 700 (949)
Q Consensus 624 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 700 (949)
+.++|++.+.||+|+||.||+|.+..+++.||+|++.... ....+.+.+|+.++++++||||+++++++...+
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~---- 82 (279)
T 3fdn_A 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDAT---- 82 (279)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSS----
T ss_pred ecccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCC----
Confidence 3567999999999999999999999999999999986432 223467889999999999999999999976544
Q ss_pred ccceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCce
Q 039533 701 DFKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTA 780 (949)
Q Consensus 701 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~ 780 (949)
..++||||+++++|.+++. ....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+
T Consensus 83 -~~~lv~e~~~~~~l~~~l~----------~~~~~~~~~~~~~~~qi~~~l~~LH~~---~i~H~dlkp~Nili~~~~~~ 148 (279)
T 3fdn_A 83 -RVYLILEYAPLGTVYRELQ----------KLSKFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGEL 148 (279)
T ss_dssp -EEEEEECCCTTEEHHHHHH----------HHSSCCHHHHHHHHHHHHHHHHHHHTT---TCEECCCCGGGEEECTTSCE
T ss_pred -EEEEEEecCCCCcHHHHHH----------hcCCCCHHHHHHHHHHHHHHHHHHHhC---CEecccCChHhEEEcCCCCE
Confidence 7899999999999999986 234589999999999999999999977 99999999999999999999
Q ss_pred EEeecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhcccc
Q 039533 781 RVGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKA 860 (949)
Q Consensus 781 kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~ 860 (949)
||+|||++........ ....||+.|+|||++.+..++.++||||||+++|||++|+.||....... ..
T Consensus 149 ~l~Dfg~~~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~--~~------ 216 (279)
T 3fdn_A 149 KIADFGWSVHAPSSRR----TDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE--TY------ 216 (279)
T ss_dssp EECSCCEESCC------------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHH--HH------
T ss_pred EEEeccccccCCcccc----cccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHHH--HH------
Confidence 9999999865443322 23458999999999999899999999999999999999999996331110 00
Q ss_pred CCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHH
Q 039533 861 LPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHE 927 (949)
Q Consensus 861 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 927 (949)
..+..... ..+ ...+..+.+++.+|++.||++|||++|+++.
T Consensus 217 -----~~~~~~~~-~~~-------------------~~~~~~~~~li~~~l~~~p~~Rps~~e~l~h 258 (279)
T 3fdn_A 217 -----KRISRVEF-TFP-------------------DFVTEGARDLISRLLKHNPSQRPMLREVLEH 258 (279)
T ss_dssp -----HHHHHTCC-CCC-------------------TTSCHHHHHHHHHHCCSSGGGSCCHHHHHHC
T ss_pred -----HHHHhCCC-CCC-------------------CcCCHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 00000000 000 0123457889999999999999999999974
No 184
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=100.00 E-value=1e-37 Score=372.68 Aligned_cols=352 Identities=18% Similarity=0.161 Sum_probs=242.1
Q ss_pred CCCCccCccCCCCcce----eeeeEEeCCCCcEEEEEcCCCCCCccccCCCCCCCCCceeeccCceeccccCCcccCccc
Q 039533 39 PVGVLGTWNESIHFCK----WYGVTCSRRHQRVTLLDLRSLKLAGSVSHFIGNLSFLKQLYLQVNSFTHEIPSEIGGLRR 114 (949)
Q Consensus 39 ~~~~l~sW~~~~~~C~----w~gv~C~~~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~ 114 (949)
....+++|.++.+||. |.++.|+. + ++-..... .....-..+++++.|++++|.+.+..+..|+++++
T Consensus 5 ~~~~l~~~~~~~~C~~~~~~~~c~~~~~---~---i~~~~~~~--~~~~~~l~l~~l~~l~l~~~~l~~lp~~~~~~l~~ 76 (597)
T 3oja_B 5 QRYNVKPRQPEYKCIDSNLQYDCVFYDV---H---IDMQTQDV--YFGFEDITLNNQKIVTFKNSTMRKLPAALLDSFRQ 76 (597)
T ss_dssp ------CCCSEECCCCC--CCSEEECSC---E---ECSSCCCC--EESCSSGGGCCCSEEEESSCEESEECTHHHHHCCC
T ss_pred ccccccCCCCCCcCcccCcCceeEecCc---e---eccccccc--ccCcccccCCCceEEEeeCCCCCCcCHHHHccCCC
Confidence 3446789988888884 66665541 1 22222111 11222335789999999999998666666899999
Q ss_pred CcEEeeccccccCcCCCCCCCCccceeecCCCccccccccccccCCCCCcEEECCCCCCCCCCCCCcCCCCCccEEeccc
Q 039533 115 LKVLALNNNSICGEIPTNISRCSTLIPIHPQNNQLVGKILSRFSSLSKTEILNLGSNHLTGSIPSSLGNLSSIHTISLAY 194 (949)
Q Consensus 115 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 194 (949)
|++|+|++|.|++..|..|+++++|++|+|++|.+++.++..|+++++|++|+|++|.|++..+..|+++++|++|+|++
T Consensus 77 L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~Ls~ 156 (597)
T 3oja_B 77 VELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSN 156 (597)
T ss_dssp CSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCCCCCHHHhccCCCCCEEEeeC
Confidence 99999999999988888999999999999999999999999999999999999999999966666789999999999999
Q ss_pred cccCCCCCCcccCCCccccccccCcccccccccccCCCCChhhhccccccccccCCCCCCCCCCcchhccccccCcccEE
Q 039533 195 NNLDGTIPNSFGWFENLVFLSLAANNLSVVENKLTGEVPSLEKLQRLQHFTITSNSLGSGGNDDLSFLCSLTNATRLTWM 274 (949)
Q Consensus 195 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~l~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~~~~L~~L 274 (949)
|.+++..|..|+.+++|++|+|++|.++.++ +..++ +|+.|
T Consensus 157 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~---------~~~l~------------------------------~L~~L 197 (597)
T 3oja_B 157 NNLERIEDDTFQATTSLQNLQLSSNRLTHVD---------LSLIP------------------------------SLFHA 197 (597)
T ss_dssp SCCCBCCTTTTTTCTTCCEEECTTSCCSBCC---------GGGCT------------------------------TCSEE
T ss_pred CcCCCCChhhhhcCCcCcEEECcCCCCCCcC---------hhhhh------------------------------hhhhh
Confidence 9999999999999999999999999876442 22233 34444
Q ss_pred EccCCCCCccCCchhhcccccccEEEccCccccCCCCCCCCCCCcccEEEeecceecccCCCcccccCCCCEEecCCccc
Q 039533 275 HINSNNFGGLLPGCISNLSKTIKTLFLNNNKIYGSIPAGIGNFVNLQRLDMWNNQLSGTIPPAIGELQNLKILGLNRNKL 354 (949)
Q Consensus 275 ~L~~N~l~~~~p~~~~~l~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 354 (949)
++++|.+++.. .+.+|+.|++++|.++...+ .+ .++|+.|+|++|.+++ +..+..+++|+.|+|++|.+
T Consensus 198 ~l~~n~l~~l~------~~~~L~~L~ls~n~l~~~~~-~~--~~~L~~L~L~~n~l~~--~~~l~~l~~L~~L~Ls~N~l 266 (597)
T 3oja_B 198 NVSYNLLSTLA------IPIAVEELDASHNSINVVRG-PV--NVELTILKLQHNNLTD--TAWLLNYPGLVEVDLSYNEL 266 (597)
T ss_dssp ECCSSCCSEEE------CCTTCSEEECCSSCCCEEEC-SC--CSCCCEEECCSSCCCC--CGGGGGCTTCSEEECCSSCC
T ss_pred hcccCcccccc------CCchhheeeccCCccccccc-cc--CCCCCEEECCCCCCCC--ChhhccCCCCCEEECCCCcc
Confidence 44444444321 12346666666666653222 21 2456666666666664 34566666666666666666
Q ss_pred ccccCcccccccccceeecccccccccCCCCCCCCCCCcEEEeeCccccCCCCCcccCCcccceeeccCCCccCCCCccc
Q 039533 355 SGNIPPSIGNLKMLLNLFLNDNFLEVSIPSSLGQCESLIEINLSNNNLSGTIPPQFFSLSSLSISLDWSRNKLTGSLPIE 434 (949)
Q Consensus 355 ~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~l~~~L~ls~N~l~~~~p~~ 434 (949)
++..|..|+++++|+.|+|++|.+++ +|..+..+++|+.|+|++|+++ .+|..
T Consensus 267 ~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~Ls~N~l~--------------------------~i~~~ 319 (597)
T 3oja_B 267 EKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL--------------------------HVERN 319 (597)
T ss_dssp CEEESGGGTTCSSCCEEECTTSCCCE-EECSSSCCTTCCEEECCSSCCC--------------------------CCGGG
T ss_pred CCCCHHHhcCccCCCEEECCCCCCCC-CCcccccCCCCcEEECCCCCCC--------------------------ccCcc
Confidence 66666666666666666666666654 3444555556665555555554 34455
Q ss_pred cccccccceeeeccccccccCCcccccccchhhcccCccccccc
Q 039533 435 VGKLKILEFLYVYENRLEGEIPSTFGNCIRLEQLGMGGNLFQGP 478 (949)
Q Consensus 435 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~ 478 (949)
++.+++|+.|+|++|+|++. | +..+++|+.|+|++|.+++.
T Consensus 320 ~~~l~~L~~L~L~~N~l~~~-~--~~~~~~L~~L~l~~N~~~~~ 360 (597)
T 3oja_B 320 QPQFDRLENLYLDHNSIVTL-K--LSTHHTLKNLTLSHNDWDCN 360 (597)
T ss_dssp HHHHTTCSEEECCSSCCCCC-C--CCTTCCCSEEECCSSCEEHH
T ss_pred cccCCCCCEEECCCCCCCCc-C--hhhcCCCCEEEeeCCCCCCh
Confidence 55666666777777776643 2 55667777777777777754
No 185
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00 E-value=1.6e-38 Score=350.06 Aligned_cols=249 Identities=20% Similarity=0.214 Sum_probs=190.0
Q ss_pred hcCCCCCCeeeeecCceEEEEEEc---CCCEEEEEEEEecCC----CcchHHHHHHHHHHHhcCCCcceeEEeeeecccc
Q 039533 625 TSGFSSANLVGVGSFGSVYKGIID---EGRTTIAVKVFNLQH----HGASRSFIAECKALKSIRHRNLVKVLTACLGADY 697 (949)
Q Consensus 625 ~~~y~~~~~lg~G~~g~Vy~~~~~---~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 697 (949)
.++|++.+.||+|+||.||+|+.. .+++.||+|+++... ......+.+|+.++++++||||+++++++...+
T Consensus 16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~- 94 (327)
T 3a62_A 16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGG- 94 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSS-
T ss_pred HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCC-
Confidence 467999999999999999999984 578999999997542 223456789999999999999999999976544
Q ss_pred cCCccceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCC
Q 039533 698 RGNDFKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDY 777 (949)
Q Consensus 698 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~ 777 (949)
..++||||+++++|.+++. ....+++..+..++.|++.||+|||++ +|+||||||+||+++.+
T Consensus 95 ----~~~lv~e~~~~~~L~~~l~----------~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~Nill~~~ 157 (327)
T 3a62_A 95 ----KLYLILEYLSGGELFMQLE----------REGIFMEDTACFYLAEISMALGHLHQK---GIIYRDLKPENIMLNHQ 157 (327)
T ss_dssp ----CEEEEEECCTTEEHHHHHH----------HHSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTT
T ss_pred ----EEEEEEeCCCCCcHHHHHH----------hCCCCCHHHHHHHHHHHHHHHHHHHhC---CEEcccCCHHHeEECCC
Confidence 7899999999999999986 234588999999999999999999988 99999999999999999
Q ss_pred CceEEeecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhc
Q 039533 778 MTARVGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFG 857 (949)
Q Consensus 778 ~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~ 857 (949)
+.+||+|||+++......... ....||+.|+|||++.+..++.++|||||||++|||++|+.||....... .
T Consensus 158 ~~~kl~Dfg~~~~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~--~---- 229 (327)
T 3a62_A 158 GHVKLTDFGLCKESIHDGTVT--HTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKK--T---- 229 (327)
T ss_dssp SCEEECCCSCC------------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH--H----
T ss_pred CcEEEEeCCcccccccCCccc--cccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCHHH--H----
Confidence 999999999998654332211 23569999999999999899999999999999999999999996432110 0
Q ss_pred cccCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCC-----CHHHHHH
Q 039533 858 RKALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRT-----NMTNVVH 926 (949)
Q Consensus 858 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----s~~ev~~ 926 (949)
...+...... .+ ...+..+.+++.+|++.||++|| ++.|+++
T Consensus 230 -------~~~i~~~~~~-~p-------------------~~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~ 276 (327)
T 3a62_A 230 -------IDKILKCKLN-LP-------------------PYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQA 276 (327)
T ss_dssp -------HHHHHHTCCC-CC-------------------TTSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHH
T ss_pred -------HHHHHhCCCC-CC-------------------CCCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHc
Confidence 0011110000 00 02234678999999999999999 6777764
No 186
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00 E-value=5.4e-39 Score=358.69 Aligned_cols=251 Identities=24% Similarity=0.259 Sum_probs=192.1
Q ss_pred hcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCC---cchHHHHHHHHH-HHhcCCCcceeEEeeeecccccCC
Q 039533 625 TSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHH---GASRSFIAECKA-LKSIRHRNLVKVLTACLGADYRGN 700 (949)
Q Consensus 625 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~-l~~l~h~niv~~~~~~~~~~~~~~ 700 (949)
.++|++.+.||+|+||.||+|++..+++.||||+++.... .....+.+|..+ ++.++||||+++++++...+
T Consensus 37 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~---- 112 (373)
T 2r5t_A 37 PSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTAD---- 112 (373)
T ss_dssp GGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSS----
T ss_pred hhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCC----
Confidence 4578999999999999999999998999999999975432 233456677776 56789999999999976544
Q ss_pred ccceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCce
Q 039533 701 DFKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTA 780 (949)
Q Consensus 701 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~ 780 (949)
..++||||+++|+|.+++. ....+++..++.++.||+.||+|||++ +|+||||||+||+++.++++
T Consensus 113 -~~~lv~E~~~gg~L~~~l~----------~~~~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~i 178 (373)
T 2r5t_A 113 -KLYFVLDYINGGELFYHLQ----------RERCFLEPRARFYAAEIASALGYLHSL---NIVYRDLKPENILLDSQGHI 178 (373)
T ss_dssp -EEEEEEECCCSCBHHHHHH----------HHSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCE
T ss_pred -EEEEEEeCCCCCcHHHHHH----------hcCCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCE
Confidence 7899999999999999996 234688999999999999999999987 99999999999999999999
Q ss_pred EEeecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhcccc
Q 039533 781 RVGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKA 860 (949)
Q Consensus 781 kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~ 860 (949)
||+|||+++........ .....||+.|+|||++.+..++.++|||||||++|||++|+.||....... .
T Consensus 179 kL~DFG~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~-----~---- 247 (373)
T 2r5t_A 179 VLTDFGLCKENIEHNST--TSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAE-----M---- 247 (373)
T ss_dssp EECCCCBCGGGBCCCCC--CCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBHHH-----H----
T ss_pred EEeeCccccccccCCCc--cccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHH-----H----
Confidence 99999999864332221 124569999999999999999999999999999999999999996331110 0
Q ss_pred CCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHH
Q 039533 861 LPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHEL 928 (949)
Q Consensus 861 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L 928 (949)
...++....... ...+..+.+++.+|++.||++||++.+.++++
T Consensus 248 ----~~~i~~~~~~~~--------------------~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~i 291 (373)
T 2r5t_A 248 ----YDNILNKPLQLK--------------------PNITNSARHLLEGLLQKDRTKRLGAKDDFMEI 291 (373)
T ss_dssp ----HHHHHHSCCCCC--------------------SSSCHHHHHHHHHHTCSSGGGSTTTTTTHHHH
T ss_pred ----HHHHHhcccCCC--------------------CCCCHHHHHHHHHHcccCHHhCCCCCCCHHHH
Confidence 011111111000 01234578899999999999999986544443
No 187
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00 E-value=7.8e-39 Score=346.98 Aligned_cols=264 Identities=22% Similarity=0.339 Sum_probs=206.8
Q ss_pred HhcCCCCCC-eeeeecCceEEEEEE--cCCCEEEEEEEEecCCC--cchHHHHHHHHHHHhcCCCcceeEEeeeeccccc
Q 039533 624 ATSGFSSAN-LVGVGSFGSVYKGII--DEGRTTIAVKVFNLQHH--GASRSFIAECKALKSIRHRNLVKVLTACLGADYR 698 (949)
Q Consensus 624 ~~~~y~~~~-~lg~G~~g~Vy~~~~--~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 698 (949)
..++|.+.+ .||+|+||.||+|.+ ..+++.||||+++.... ...+++.+|++++++++||||+++++++. .
T Consensus 14 ~~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~--- 89 (291)
T 1xbb_A 14 DRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICE-A--- 89 (291)
T ss_dssp CGGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEEE-S---
T ss_pred cchhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEC-C---
Confidence 346778777 999999999999965 45678999999975432 23467999999999999999999999973 2
Q ss_pred CCccceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCC
Q 039533 699 GNDFKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYM 778 (949)
Q Consensus 699 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~ 778 (949)
+..++||||+++++|.+++. ....+++.++..++.|++.||+|||++ +|+||||||+||+++.++
T Consensus 90 --~~~~lv~e~~~~~~L~~~l~----------~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nil~~~~~ 154 (291)
T 1xbb_A 90 --ESWMLVMEMAELGPLNKYLQ----------QNRHVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQH 154 (291)
T ss_dssp --SSEEEEEECCTTEEHHHHHH----------HCTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETT
T ss_pred --CCcEEEEEeCCCCCHHHHHH----------hCcCCCHHHHHHHHHHHHHHHHHHHhC---CeEcCCCCcceEEEeCCC
Confidence 25789999999999999996 234589999999999999999999988 999999999999999999
Q ss_pred ceEEeecccceecCCCCCcc-ccccccCccCccCccccCCCccCCccchHHHHHHHHHHHh-CCCCCccccccCchhhhh
Q 039533 779 TARVGDFGLARILSPDHTQT-SSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVI-GKKPIDIMFEGDINLHNF 856 (949)
Q Consensus 779 ~~kl~DfG~a~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~ellt-g~~Pf~~~~~~~~~~~~~ 856 (949)
.+||+|||+++......... ......++..|+|||++.+..++.++||||||+++|||++ |+.||....... ..
T Consensus 155 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~--~~-- 230 (291)
T 1xbb_A 155 YAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE--VT-- 230 (291)
T ss_dssp EEEECCCTTCEECCTTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH--HH--
T ss_pred cEEEccCCcceeeccCCCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHHH--HH--
Confidence 99999999998876544321 1122346789999999988889999999999999999999 999996432111 10
Q ss_pred ccccCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHHhHHhhc
Q 039533 857 GRKALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHELQSIKNILL 936 (949)
Q Consensus 857 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~~~~~ 936 (949)
+.+........ ...++..+.+++.+||+.||++|||+.||++.|+++.....
T Consensus 231 ----------~~~~~~~~~~~------------------~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~~ 282 (291)
T 1xbb_A 231 ----------AMLEKGERMGC------------------PAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDVV 282 (291)
T ss_dssp ----------HHHHTTCCCCC------------------CTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHHHH
T ss_pred ----------HHHHcCCCCCC------------------CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHHh
Confidence 01100000000 01234568899999999999999999999999999977765
Q ss_pred cC
Q 039533 937 GV 938 (949)
Q Consensus 937 ~~ 938 (949)
+.
T Consensus 283 ~~ 284 (291)
T 1xbb_A 283 NE 284 (291)
T ss_dssp HH
T ss_pred hc
Confidence 43
No 188
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00 E-value=1.8e-38 Score=355.48 Aligned_cols=285 Identities=20% Similarity=0.242 Sum_probs=206.1
Q ss_pred hcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCC-cchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCccc
Q 039533 625 TSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHH-GASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFK 703 (949)
Q Consensus 625 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 703 (949)
.++|++.+.||+|+||.||+|.+..+++.||||++..... ...+.+.+|++++++++||||+++++++...........
T Consensus 26 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 105 (364)
T 3qyz_A 26 GPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDV 105 (364)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCE
T ss_pred cccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceE
Confidence 4689999999999999999999998999999999974432 234678899999999999999999999876655555678
Q ss_pred eeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEe
Q 039533 704 ASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVG 783 (949)
Q Consensus 704 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~ 783 (949)
++||||++ ++|.+++. ...+++.++..++.|++.||+|||++ +|+||||||+||+++.++.+||+
T Consensus 106 ~iv~e~~~-~~L~~~l~-----------~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~ 170 (364)
T 3qyz_A 106 YIVQDLME-TDLYKLLK-----------TQHLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKIC 170 (364)
T ss_dssp EEEEECCS-EEHHHHHH-----------HCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEEC
T ss_pred EEEEcccC-cCHHHHHH-----------hCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCChHhEEECCCCCEEEE
Confidence 99999997 59999885 23589999999999999999999988 99999999999999999999999
Q ss_pred ecccceecCCCCCcc-ccccccCccCccCccccCCC-ccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhccccC
Q 039533 784 DFGLARILSPDHTQT-SSFSVKGSLGYIAPEYGVGC-EVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKAL 861 (949)
Q Consensus 784 DfG~a~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~-~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~ 861 (949)
|||.++......... ......||+.|+|||++.+. .++.++||||+||++|||++|+.||......+. +..... ..
T Consensus 171 Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~-~~~i~~-~~ 248 (364)
T 3qyz_A 171 DFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQ-LNHILG-IL 248 (364)
T ss_dssp CCTTCEECCGGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGH-HHHHHH-HH
T ss_pred eCcceEecCCCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHH-HHHHHH-Hh
Confidence 999998765433211 11235699999999986654 589999999999999999999999964422211 110000 00
Q ss_pred CCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 039533 862 PDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVH 926 (949)
Q Consensus 862 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 926 (949)
.....+.+..............................+..+.+++.+|++.||++|||++|+++
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 313 (364)
T 3qyz_A 249 GSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA 313 (364)
T ss_dssp CSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred CCCCHHHHHHhhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 00000000000000000000000000000000001123456889999999999999999999986
No 189
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00 E-value=1.6e-38 Score=352.44 Aligned_cols=275 Identities=22% Similarity=0.240 Sum_probs=198.0
Q ss_pred hcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCCcchHHHHHHHHHHHhcC-CCcceeEEeeeecccc---cCC
Q 039533 625 TSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHGASRSFIAECKALKSIR-HRNLVKVLTACLGADY---RGN 700 (949)
Q Consensus 625 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~---~~~ 700 (949)
..+|++.+.||+|+||.||+|++..+++.||||++........+.+.+|+.+++++. ||||+++++++..... ...
T Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~ 106 (337)
T 3ll6_A 27 ELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQ 106 (337)
T ss_dssp TEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSS
T ss_pred CceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccCC
Confidence 357889999999999999999998889999999997666555678899999999996 9999999999853321 334
Q ss_pred ccceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCce
Q 039533 701 DFKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTA 780 (949)
Q Consensus 701 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~ 780 (949)
...++||||+. |+|.+++... .....+++.+++.++.|++.||+|||++ .++|+||||||+||+++.++.+
T Consensus 107 ~~~~lv~e~~~-g~L~~~l~~~-------~~~~~~~~~~~~~i~~qi~~~l~~LH~~-~~~ivH~Dikp~NIl~~~~~~~ 177 (337)
T 3ll6_A 107 AEFLLLTELCK-GQLVEFLKKM-------ESRGPLSCDTVLKIFYQTCRAVQHMHRQ-KPPIIHRDLKVENLLLSNQGTI 177 (337)
T ss_dssp EEEEEEEECCS-EEHHHHHHHH-------HTTCSCCHHHHHHHHHHHHHHHHHHHTS-SSCCBCCCCCGGGCEECTTSCE
T ss_pred ceEEEEEEecC-CCHHHHHHHh-------hccCCCCHHHHHHHHHHHHHHHHHHHhC-CCCEEEccCCcccEEECCCCCE
Confidence 45799999996 7999988521 1234589999999999999999999977 1229999999999999999999
Q ss_pred EEeecccceecCCCCCcc----------ccccccCccCccCcccc---CCCccCCccchHHHHHHHHHHHhCCCCCcccc
Q 039533 781 RVGDFGLARILSPDHTQT----------SSFSVKGSLGYIAPEYG---VGCEVSTNGDVYSYGILLLELVIGKKPIDIMF 847 (949)
Q Consensus 781 kl~DfG~a~~~~~~~~~~----------~~~~~~gt~~y~aPE~~---~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~ 847 (949)
||+|||+++......... ......||+.|+|||++ .+..++.++|||||||++|||++|+.||....
T Consensus 178 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~ 257 (337)
T 3ll6_A 178 KLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGA 257 (337)
T ss_dssp EBCCCTTCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC----
T ss_pred EEecCccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchh
Confidence 999999998765433211 11134589999999998 56678999999999999999999999996432
Q ss_pred ccCchhhhhccccCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHH
Q 039533 848 EGDINLHNFGRKALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHE 927 (949)
Q Consensus 848 ~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 927 (949)
... +.......... ...+..+.+++.+||+.||++|||+.|+++.
T Consensus 258 ~~~-----------------~~~~~~~~~~~------------------~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~ 302 (337)
T 3ll6_A 258 KLR-----------------IVNGKYSIPPH------------------DTQYTVFHSLIRAMLQVNPEERLSIAEVVHQ 302 (337)
T ss_dssp -------------------------CCCCTT------------------CCSSGGGHHHHHHHSCSSGGGSCCHHHHHHH
T ss_pred HHH-----------------hhcCcccCCcc------------------cccchHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 110 00000000000 0112236789999999999999999999999
Q ss_pred HHHhHHhhccCCCCCC
Q 039533 928 LQSIKNILLGVELCPP 943 (949)
Q Consensus 928 L~~i~~~~~~~~~~~~ 943 (949)
|+++..........|.
T Consensus 303 l~~~~~~~~~~~~~~~ 318 (337)
T 3ll6_A 303 LQEIAAARNVNPKSPI 318 (337)
T ss_dssp HHHHHHHTTCCTTSCC
T ss_pred HHHHHhccCCCCCccH
Confidence 9999887655544443
No 190
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.4e-38 Score=356.14 Aligned_cols=279 Identities=19% Similarity=0.229 Sum_probs=196.5
Q ss_pred hcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCC--cchHHHHHHHHHHHhcCCCcceeEEeeeecccc-cCCc
Q 039533 625 TSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHH--GASRSFIAECKALKSIRHRNLVKVLTACLGADY-RGND 701 (949)
Q Consensus 625 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~-~~~~ 701 (949)
.++|++.+.||+|+||.||+|.+..+++.||||++..... ...+++.+|++++++++||||+++++++..... ....
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 103 (367)
T 1cm8_A 24 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFT 103 (367)
T ss_dssp BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCC
T ss_pred cceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCc
Confidence 4678999999999999999999998999999999864322 234678899999999999999999999865431 2234
Q ss_pred cceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceE
Q 039533 702 FKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTAR 781 (949)
Q Consensus 702 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~k 781 (949)
..++||||+ +++|.+++. ...+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+|
T Consensus 104 ~~~lv~e~~-~~~L~~~~~-----------~~~l~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~k 168 (367)
T 1cm8_A 104 DFYLVMPFM-GTDLGKLMK-----------HEKLGEDRIQFLVYQMLKGLRYIHAA---GIIHRDLKPGNLAVNEDCELK 168 (367)
T ss_dssp CCEEEEECC-SEEHHHHHH-----------HCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEE
T ss_pred eEEEEEecC-CCCHHHHHh-----------cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCHHHEEEcCCCCEE
Confidence 569999999 889999986 13588999999999999999999988 999999999999999999999
Q ss_pred EeecccceecCCCCCccccccccCccCccCccccCC-CccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhcccc
Q 039533 782 VGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVG-CEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKA 860 (949)
Q Consensus 782 l~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~ 860 (949)
|+|||+++....... ...||..|+|||++.+ ..++.++||||+||++|||++|+.||......+ .+..... .
T Consensus 169 l~Dfg~a~~~~~~~~-----~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~-~l~~i~~-~ 241 (367)
T 1cm8_A 169 ILDFGLARQADSEMT-----GYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLD-QLKEIMK-V 241 (367)
T ss_dssp ECCCTTCEECCSSCC-----SSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHH-H
T ss_pred EEeeecccccccccC-----cCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHH-h
Confidence 999999987654322 3468999999999877 679999999999999999999999996432111 0000000 0
Q ss_pred CCCchhhhcccCCCCCchhhhhhh-chhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 039533 861 LPDDVMDIVDSSLLPDDEDLILTG-NQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVH 926 (949)
Q Consensus 861 ~~~~~~~~~d~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 926 (949)
......+.+... ........... ...............+..+.+++.+|++.||++|||++|+++
T Consensus 242 ~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~ 307 (367)
T 1cm8_A 242 TGTPPAEFVQRL-QSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALA 307 (367)
T ss_dssp HCCCCHHHHHTC-SCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred cCCCCHHHHHHh-hhHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhc
Confidence 000000000000 00000000000 000000000001123456889999999999999999999987
No 191
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00 E-value=5.1e-39 Score=358.41 Aligned_cols=276 Identities=15% Similarity=0.163 Sum_probs=209.8
Q ss_pred hcCCCCCCeeeeecCceEEEEEEcC--------CCEEEEEEEEecCCCcchHHHHHHHHHHHhcCCCccee---------
Q 039533 625 TSGFSSANLVGVGSFGSVYKGIIDE--------GRTTIAVKVFNLQHHGASRSFIAECKALKSIRHRNLVK--------- 687 (949)
Q Consensus 625 ~~~y~~~~~lg~G~~g~Vy~~~~~~--------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~--------- 687 (949)
.++|++.+.||+|+||.||+|++.. .++.||||++... +.+.+|++++++++||||++
T Consensus 41 ~~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 115 (352)
T 2jii_A 41 GRQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-----GRLFNEQNFFQRAAKPLQVNKWKKLYSTP 115 (352)
T ss_dssp SCEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT-----STHHHHHHHHHHHCCHHHHHHHHHHTTCT
T ss_pred CCeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-----chHHHHHHHHHHhcccchhhhhhhhccCC
Confidence 3678999999999999999999986 3789999998743 46889999999999999998
Q ss_pred ------EEeeeecccccCCccceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCC
Q 039533 688 ------VLTACLGADYRGNDFKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPV 761 (949)
Q Consensus 688 ------~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ 761 (949)
+++++.. .....++||||+ +++|.+++... ....+++.+++.++.|++.||+|||++ +
T Consensus 116 ~~~i~~~~~~~~~----~~~~~~lv~e~~-~~~L~~~l~~~--------~~~~l~~~~~~~i~~qi~~~L~~LH~~---~ 179 (352)
T 2jii_A 116 LLAIPTCMGFGVH----QDKYRFLVLPSL-GRSLQSALDVS--------PKHVLSERSVLQVACRLLDALEFLHEN---E 179 (352)
T ss_dssp TCSCCCCCEEEEE----TTTEEEEEEECC-CEEHHHHHHHS--------GGGCCCHHHHHHHHHHHHHHHHHHHHT---T
T ss_pred ccCccchhhcccc----CCcEEEEEecCC-CcCHHHHHHhC--------CcCCCCHHHHHHHHHHHHHHHHHHHhC---C
Confidence 4445432 234789999999 99999999721 135699999999999999999999988 9
Q ss_pred eEecCCCCCCeeecCCC--ceEEeecccceecCCCCCc-----cccccccCccCccCccccCCCccCCccchHHHHHHHH
Q 039533 762 TAHCDLKPSNVLLDDYM--TARVGDFGLARILSPDHTQ-----TSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLL 834 (949)
Q Consensus 762 ivHrDlkp~NIll~~~~--~~kl~DfG~a~~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~ 834 (949)
|+||||||+||+++.++ .+||+|||+++........ .......||+.|+|||++.+..++.++|||||||++|
T Consensus 180 ivH~Dikp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ 259 (352)
T 2jii_A 180 YVHGNVTAENIFVDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCML 259 (352)
T ss_dssp CBCSCCCGGGEEEETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHH
T ss_pred ccCCCCCHHHEEEcCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHH
Confidence 99999999999999998 9999999999876543211 1112346999999999999989999999999999999
Q ss_pred HHHhCCCCCccccccCchhhhhccccCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCC
Q 039533 835 ELVIGKKPIDIMFEGDINLHNFGRKALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMEL 914 (949)
Q Consensus 835 elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~d 914 (949)
||++|+.||................. ......+.+.... ....+..+.+++.+|++.|
T Consensus 260 el~~g~~pf~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~---------------------~~~~~~~l~~li~~~l~~d 317 (352)
T 2jii_A 260 KWLYGFLPWTNCLPNTEDIMKQKQKF-VDKPGPFVGPCGH---------------------WIRPSETLQKYLKVVMALT 317 (352)
T ss_dssp HHHHSCCTTGGGTTCHHHHHHHHHHH-HHSCCCEECTTSC---------------------EECCCHHHHHHHHHHHTCC
T ss_pred HHHhCCCCcccCCcCHHHHHHHHHhc-cCChhhhhhhccc---------------------cCCCcHHHHHHHHHHHhCC
Confidence 99999999975432211111111000 0000000000000 0012456889999999999
Q ss_pred CCCCCCHHHHHHHHHHhHHhhccCCCCCC
Q 039533 915 PQDRTNMTNVVHELQSIKNILLGVELCPP 943 (949)
Q Consensus 915 P~~RPs~~ev~~~L~~i~~~~~~~~~~~~ 943 (949)
|++|||++||++.|+++.+........|+
T Consensus 318 p~~Rps~~~l~~~L~~~~~~~~~~~~~~~ 346 (352)
T 2jii_A 318 YEEKPPYAMLRNNLEALLQDLRVSPYDPI 346 (352)
T ss_dssp TTCCCCHHHHHHHHHHHHHHTTCCTTSCC
T ss_pred hhhCCCHHHHHHHHHHHHHhcCCCcCccc
Confidence 99999999999999999988877655544
No 192
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00 E-value=2.9e-38 Score=354.12 Aligned_cols=258 Identities=14% Similarity=0.125 Sum_probs=203.4
Q ss_pred HhcCCCCCCeeeeecCceEEEEE-----EcCCCEEEEEEEEecCCCcchHHHHHHHHHHHhcC---CCcceeEEeeeecc
Q 039533 624 ATSGFSSANLVGVGSFGSVYKGI-----IDEGRTTIAVKVFNLQHHGASRSFIAECKALKSIR---HRNLVKVLTACLGA 695 (949)
Q Consensus 624 ~~~~y~~~~~lg~G~~g~Vy~~~-----~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~~~~~~~~~ 695 (949)
..++|.+.+.||+|+||+||+|. ...+++.||||+++.. ...++..|++++++++ |+||+++++++...
T Consensus 63 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~ 139 (365)
T 3e7e_A 63 GSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA---NPWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQ 139 (365)
T ss_dssp SSSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSC---CHHHHHHHHHHHHHSCGGGGGGBCCEEEEEECS
T ss_pred CCEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC---ChhHHHHHHHHHHHhhhhhhhhhhhhheeeecC
Confidence 34678899999999999999994 5567889999998643 3467888888888886 99999999997655
Q ss_pred cccCCccceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeec
Q 039533 696 DYRGNDFKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLD 775 (949)
Q Consensus 696 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~ 775 (949)
+ ..++||||+++|+|.+++..... .....+++..++.|+.|++.||+|||++ +|+||||||+|||++
T Consensus 140 ~-----~~~lv~e~~~~g~L~~~l~~~~~-----~~~~~l~~~~~~~i~~qi~~~L~~lH~~---~ivHrDiKp~NIll~ 206 (365)
T 3e7e_A 140 N-----GSVLVGELYSYGTLLNAINLYKN-----TPEKVMPQGLVISFAMRMLYMIEQVHDC---EIIHGDIKPDNFILG 206 (365)
T ss_dssp S-----CEEEEECCCCSCBHHHHHHHHHT-----STTCSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEEC
T ss_pred C-----CcEEEEeccCCCcHHHHHHHhhc-----ccccCCCHHHHHHHHHHHHHHHHHHhhC---CeecCCCCHHHEEec
Confidence 4 78999999999999999963211 1235699999999999999999999977 899999999999999
Q ss_pred C-----------CCceEEeecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCc
Q 039533 776 D-----------YMTARVGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPID 844 (949)
Q Consensus 776 ~-----------~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~ 844 (949)
. ++.+||+|||+|+...............||+.|+|||++.+..++.++|||||||++|||+||+.||.
T Consensus 207 ~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~ 286 (365)
T 3e7e_A 207 NGFLEQDDEDDLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKV 286 (365)
T ss_dssp GGGTCC------CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCE
T ss_pred ccccCccccccccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccc
Confidence 8 89999999999987643333233335669999999999999999999999999999999999999985
Q ss_pred cccccCchhhhhccccCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCC-CCHHH
Q 039533 845 IMFEGDINLHNFGRKALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDR-TNMTN 923 (949)
Q Consensus 845 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~R-Ps~~e 923 (949)
....+... .+......+ ..+.+.+++..|++.+|.+| |++++
T Consensus 287 ~~~~~~~~----------------~~~~~~~~~---------------------~~~~~~~~~~~~l~~~p~~r~~~~~~ 329 (365)
T 3e7e_A 287 KNEGGECK----------------PEGLFRRLP---------------------HLDMWNEFFHVMLNIPDCHHLPSLDL 329 (365)
T ss_dssp EEETTEEE----------------ECSCCTTCS---------------------SHHHHHHHHHHHHCCCCTTCCCCHHH
T ss_pred cCCCCcee----------------echhccccC---------------------cHHHHHHHHHHHcCCCCCCcchHHHH
Confidence 43221100 000010000 12346678889999999998 58889
Q ss_pred HHHHHHHhHHh
Q 039533 924 VVHELQSIKNI 934 (949)
Q Consensus 924 v~~~L~~i~~~ 934 (949)
+.+.|+++...
T Consensus 330 l~~~l~~~l~~ 340 (365)
T 3e7e_A 330 LRQKLKKVFQQ 340 (365)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99988887665
No 193
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00 E-value=1.3e-38 Score=366.64 Aligned_cols=260 Identities=26% Similarity=0.412 Sum_probs=202.4
Q ss_pred hcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCCcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCccce
Q 039533 625 TSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFKA 704 (949)
Q Consensus 625 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 704 (949)
.++|++.+.||+|+||.||+|.+. ++..||||+++... ...+.+.+|++++++++||||+++++++.. ...+
T Consensus 183 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~------~~~~ 254 (452)
T 1fmk_A 183 RESLRLEVKLGQGCFGEVWMGTWN-GTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE------EPIY 254 (452)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEET-TTEEEEEEECCTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS------SSCE
T ss_pred hhHceeeeeecCCCCeEEEEEEEC-CCceEEEEEeccCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEcC------CceE
Confidence 356788899999999999999997 45789999997544 235689999999999999999999999753 2579
Q ss_pred eEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEee
Q 039533 705 SVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVGD 784 (949)
Q Consensus 705 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~D 784 (949)
+||||+++|+|.+++... ....+++.++..++.|++.||+|||++ +|+||||||+||++++++.+||+|
T Consensus 255 iv~e~~~~gsL~~~l~~~--------~~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~D 323 (452)
T 1fmk_A 255 IVTEYMSKGSLLDFLKGE--------TGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVAD 323 (452)
T ss_dssp EEECCCTTCBHHHHHSHH--------HHTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECC
T ss_pred EEehhhcCCCHHHHHHhc--------CCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEECCCCCEEECC
Confidence 999999999999999621 224589999999999999999999987 899999999999999999999999
Q ss_pred cccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHh-CCCCCccccccCchhhhhccccCCC
Q 039533 785 FGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVI-GKKPIDIMFEGDINLHNFGRKALPD 863 (949)
Q Consensus 785 fG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~ 863 (949)
||+++........ ......++..|+|||++.+..++.++|||||||++|||++ |+.||......+ ..
T Consensus 324 fG~a~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~--~~--------- 391 (452)
T 1fmk_A 324 FGLARLIEDNEYT-ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE--VL--------- 391 (452)
T ss_dssp CCTTC---------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH--HH---------
T ss_pred CccceecCCCcee-cccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHHH--HH---------
Confidence 9999876543221 1123447889999999988899999999999999999999 999996432111 00
Q ss_pred chhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHHhHHhhc
Q 039533 864 DVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHELQSIKNILL 936 (949)
Q Consensus 864 ~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~~~~~ 936 (949)
+.+...... +....++..+.+++.+||+.||++|||++++++.|+++.....
T Consensus 392 ---~~i~~~~~~------------------~~~~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~~~~~ 443 (452)
T 1fmk_A 392 ---DQVERGYRM------------------PCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTE 443 (452)
T ss_dssp ---HHHHTTCCC------------------CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSCSC
T ss_pred ---HHHHcCCCC------------------CCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhccCC
Confidence 000000000 0011345678899999999999999999999999999865533
No 194
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.4e-38 Score=353.39 Aligned_cols=252 Identities=21% Similarity=0.326 Sum_probs=191.6
Q ss_pred hcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCCc--chHHHHHHHHHHHhcCC--CcceeEEeeeecccccCC
Q 039533 625 TSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHG--ASRSFIAECKALKSIRH--RNLVKVLTACLGADYRGN 700 (949)
Q Consensus 625 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h--~niv~~~~~~~~~~~~~~ 700 (949)
.++|++.+.||+|+||.||+|.+. +++.||||++...... ..+.+.+|+.++++++| |||+++++++....
T Consensus 8 ~~~y~i~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~---- 82 (343)
T 3dbq_A 8 GRIYSILKQIGSGGSSKVFQVLNE-KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQ---- 82 (343)
T ss_dssp SCEEEEEEEESCCSSEEEEEEECT-TSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSS----
T ss_pred cCEEEEEEEEecCCCeEEEEEEeC-CCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCC----
Confidence 356899999999999999999986 6889999999754332 34678999999999976 99999999976544
Q ss_pred ccceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCce
Q 039533 701 DFKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTA 780 (949)
Q Consensus 701 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~ 780 (949)
..++||| +.+++|.+++. ....+++.++..++.|++.||+|||++ +|+||||||+||+++ ++.+
T Consensus 83 -~~~lv~e-~~~~~L~~~l~----------~~~~~~~~~~~~i~~qi~~al~~lH~~---~iiHrDikp~NIll~-~~~~ 146 (343)
T 3dbq_A 83 -YIYMVME-CGNIDLNSWLK----------KKKSIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGML 146 (343)
T ss_dssp -EEEEEEC-CCSEEHHHHHH----------HSCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEE-TTEE
T ss_pred -EEEEEEe-CCCCCHHHHHH----------hcCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcceEEEE-CCcE
Confidence 7899999 46789999996 235689999999999999999999987 899999999999997 5789
Q ss_pred EEeecccceecCCCCCccccccccCccCccCccccCC-----------CccCCccchHHHHHHHHHHHhCCCCCcccccc
Q 039533 781 RVGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVG-----------CEVSTNGDVYSYGILLLELVIGKKPIDIMFEG 849 (949)
Q Consensus 781 kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----------~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~ 849 (949)
||+|||+++...............||+.|+|||++.+ ..++.++|||||||++|||++|+.||......
T Consensus 147 kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~ 226 (343)
T 3dbq_A 147 KLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQ 226 (343)
T ss_dssp EECCCSSSCCC------------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSH
T ss_pred EEeecccccccCcccccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhH
Confidence 9999999987765443333334569999999999754 57889999999999999999999999643221
Q ss_pred CchhhhhccccCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHH
Q 039533 850 DINLHNFGRKALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHE 927 (949)
Q Consensus 850 ~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 927 (949)
.... ...++........ ...+..+.+++.+||+.||++|||+.|+++.
T Consensus 227 ~~~~------------~~~~~~~~~~~~~------------------~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~h 274 (343)
T 3dbq_A 227 ISKL------------HAIIDPNHEIEFP------------------DIPEKDLQDVLKCCLKRDPKQRISIPELLAH 274 (343)
T ss_dssp HHHH------------HHHHCTTSCCCCC------------------CCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred HHHH------------HHHhcCCcccCCc------------------ccCCHHHHHHHHHHcCCChhHCCCHHHHHhC
Confidence 1111 1111111111000 0112457899999999999999999999764
No 195
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00 E-value=1.7e-38 Score=342.02 Aligned_cols=254 Identities=27% Similarity=0.358 Sum_probs=197.4
Q ss_pred hcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCCcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCccce
Q 039533 625 TSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFKA 704 (949)
Q Consensus 625 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 704 (949)
.++|++.+.||+|+||.||+|++. ++.||||+++... ..+.+.+|++++++++||||+++++++... ....+
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~----~~~~~ 91 (278)
T 1byg_A 20 MKELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEE----KGGLY 91 (278)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEET--TEEEEEEECCCCC----HHHHHTHHHHTTCCCTTBCCEEEEECCC------CCE
T ss_pred hhhceEEeEEecCCCceEEEEEEc--CCEEEEEEecchh--HHHHHHHHHHHHHhCCCCCEeeEEEEEEcC----CCceE
Confidence 467899999999999999999885 7899999986432 457899999999999999999999986532 23689
Q ss_pred eEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEee
Q 039533 705 SVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVGD 784 (949)
Q Consensus 705 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~D 784 (949)
+||||+++++|.+++... ....+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|
T Consensus 92 lv~e~~~~~~L~~~l~~~--------~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~D 160 (278)
T 1byg_A 92 IVTEYMAKGSLVDYLRSR--------GRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSD 160 (278)
T ss_dssp EEECCCTTEEHHHHHHHH--------HHHHCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSCEEECC
T ss_pred EEEecCCCCCHHHHHHhc--------ccccCCHHHHHHHHHHHHHHHHHHHhC---CccccCCCcceEEEeCCCcEEEee
Confidence 999999999999999621 122378899999999999999999987 899999999999999999999999
Q ss_pred cccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHh-CCCCCccccccCchhhhhccccCCC
Q 039533 785 FGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVI-GKKPIDIMFEGDINLHNFGRKALPD 863 (949)
Q Consensus 785 fG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~ 863 (949)
||+++....... ...++..|+|||++.+..++.++||||||+++|||++ |+.||......+ ..
T Consensus 161 fg~~~~~~~~~~-----~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~--~~--------- 224 (278)
T 1byg_A 161 FGLTKEASSTQD-----TGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD--VV--------- 224 (278)
T ss_dssp CCC-----------------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGG--HH---------
T ss_pred cccccccccccc-----CCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHHH--HH---------
Confidence 999986543322 2347889999999988889999999999999999998 999986432111 00
Q ss_pred chhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHHhHHh
Q 039533 864 DVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHELQSIKNI 934 (949)
Q Consensus 864 ~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~~~ 934 (949)
..+........ ...++..+.+++.+|++.||++|||+.|+++.|++++..
T Consensus 225 ---~~~~~~~~~~~------------------~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~i~~~ 274 (278)
T 1byg_A 225 ---PRVEKGYKMDA------------------PDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKTH 274 (278)
T ss_dssp ---HHHTTTCCCCC------------------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred ---HHHhcCCCCCC------------------cccCCHHHHHHHHHHhcCChhhCCCHHHHHHHHHHHHhh
Confidence 00000000000 012345688999999999999999999999999999765
No 196
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00 E-value=1.1e-38 Score=351.94 Aligned_cols=268 Identities=25% Similarity=0.352 Sum_probs=203.0
Q ss_pred hcCCCCCCeeeeecCceEEEEE-----EcCCCEEEEEEEEecCC-CcchHHHHHHHHHHHhcCCCcceeEEeeeeccccc
Q 039533 625 TSGFSSANLVGVGSFGSVYKGI-----IDEGRTTIAVKVFNLQH-HGASRSFIAECKALKSIRHRNLVKVLTACLGADYR 698 (949)
Q Consensus 625 ~~~y~~~~~lg~G~~g~Vy~~~-----~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 698 (949)
.++|++.+.||+|+||.||+|+ ...+++.||||++.... .....++.+|+.++++++||||+++++++...+
T Consensus 29 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-- 106 (327)
T 2yfx_A 29 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSL-- 106 (327)
T ss_dssp GGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS--
T ss_pred hhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCC--
Confidence 4679999999999999999999 44567889999986443 234467889999999999999999999976544
Q ss_pred CCccceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecC--
Q 039533 699 GNDFKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDD-- 776 (949)
Q Consensus 699 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~-- 776 (949)
..++||||+++++|.+++...... ......+++.+++.++.|++.||+|||++ +|+||||||+||+++.
T Consensus 107 ---~~~lv~e~~~~~~L~~~l~~~~~~---~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~i~H~dlkp~NIli~~~~ 177 (327)
T 2yfx_A 107 ---PRFILMELMAGGDLKSFLRETRPR---PSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPG 177 (327)
T ss_dssp ---SCEEEEECCTTEEHHHHHHHTSCC---SSSTTSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSS
T ss_pred ---CcEEEEecCCCCcHHHHHHhhccc---ccccccccHHHHHHHHHHHHHHHHHHhhC---CeecCcCCHhHEEEecCC
Confidence 689999999999999999743211 12235689999999999999999999987 9999999999999984
Q ss_pred -CCceEEeecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHh-CCCCCccccccCchhh
Q 039533 777 -YMTARVGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVI-GKKPIDIMFEGDINLH 854 (949)
Q Consensus 777 -~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~ellt-g~~Pf~~~~~~~~~~~ 854 (949)
+..+||+|||.++...............||+.|+|||++.+..++.++||||||+++|||+| |+.||...... ...
T Consensus 178 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~--~~~ 255 (327)
T 2yfx_A 178 PGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ--EVL 255 (327)
T ss_dssp TTCCEEECCCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH--HHH
T ss_pred CcceEEECccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCHH--HHH
Confidence 45699999999986544333222234458899999999988889999999999999999998 99998643211 011
Q ss_pred hhccccCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHHhHHh
Q 039533 855 NFGRKALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHELQSIKNI 934 (949)
Q Consensus 855 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~~~ 934 (949)
.. +........ ...++..+.+++.+||+.||++|||+.|+++.|+.+...
T Consensus 256 ~~------------~~~~~~~~~------------------~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~~~ 305 (327)
T 2yfx_A 256 EF------------VTSGGRMDP------------------PKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQD 305 (327)
T ss_dssp HH------------HHTTCCCCC------------------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred HH------------HhcCCCCCC------------------CCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHhcC
Confidence 00 000000000 012345678999999999999999999999999998765
Q ss_pred h
Q 039533 935 L 935 (949)
Q Consensus 935 ~ 935 (949)
.
T Consensus 306 ~ 306 (327)
T 2yfx_A 306 P 306 (327)
T ss_dssp H
T ss_pred H
Confidence 4
No 197
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00 E-value=4.6e-38 Score=340.78 Aligned_cols=253 Identities=22% Similarity=0.339 Sum_probs=198.4
Q ss_pred CCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCC--CcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCccce
Q 039533 627 GFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQH--HGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFKA 704 (949)
Q Consensus 627 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 704 (949)
.|.+.+.||+|+||.||+|.+..++..||+|++.... ....+.+.+|+.++++++||||+++++++.... .+....+
T Consensus 27 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~-~~~~~~~ 105 (290)
T 1t4h_A 27 FLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTV-KGKKCIV 105 (290)
T ss_dssp EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEES-SSCEEEE
T ss_pred eEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecccc-CCCceEE
Confidence 3677789999999999999999899999999997543 233467899999999999999999999876532 3345689
Q ss_pred eEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeec-CCCceEEe
Q 039533 705 SVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLD-DYMTARVG 783 (949)
Q Consensus 705 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~-~~~~~kl~ 783 (949)
+||||+++++|.+++. ....+++..+..++.|++.||+|||+. .++|+||||||+||+++ +++.+||+
T Consensus 106 lv~e~~~~~~L~~~l~----------~~~~~~~~~~~~~~~qi~~~l~~lH~~-~~~i~H~dikp~Nil~~~~~~~~kl~ 174 (290)
T 1t4h_A 106 LVTELMTSGTLKTYLK----------RFKVMKIKVLRSWCRQILKGLQFLHTR-TPPIIHRDLKCDNIFITGPTGSVKIG 174 (290)
T ss_dssp EEEECCCSCBHHHHHH----------HHSSCCHHHHHHHHHHHHHHHHHHHTS-SSCCCCSCCCGGGEEESSTTSCEEEC
T ss_pred EEEEecCCCCHHHHHH----------HccCCCHHHHHHHHHHHHHHHHHHHcC-CCCEEECCCCHHHEEEECCCCCEEEe
Confidence 9999999999999996 235689999999999999999999987 22399999999999998 78999999
Q ss_pred ecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhccccCCC
Q 039533 784 DFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKALPD 863 (949)
Q Consensus 784 DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~ 863 (949)
|||++........ ....||+.|+|||++.+ .++.++||||+||++|+|++|+.||.............
T Consensus 175 Dfg~~~~~~~~~~----~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~------- 242 (290)
T 1t4h_A 175 DLGLATLKRASFA----KAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRV------- 242 (290)
T ss_dssp CTTGGGGCCTTSB----EESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHH-------
T ss_pred eCCCccccccccc----ccccCCcCcCCHHHHhc-cCCCcchHHHHHHHHHHHHhCCCCCCCcCcHHHHHHHH-------
Confidence 9999976543322 13459999999998875 58999999999999999999999996432211111000
Q ss_pred chhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 039533 864 DVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVH 926 (949)
Q Consensus 864 ~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 926 (949)
.....+... ....+..+.+++.+|++.||++|||++|+++
T Consensus 243 ------~~~~~~~~~-----------------~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 282 (290)
T 1t4h_A 243 ------TSGVKPASF-----------------DKVAIPEVKEIIEGCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp ------TTTCCCGGG-----------------GGCCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred ------hccCCcccc-----------------CCCCCHHHHHHHHHHccCChhhCCCHHHHhh
Confidence 000000000 0012345789999999999999999999985
No 198
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00 E-value=1.5e-38 Score=343.58 Aligned_cols=259 Identities=26% Similarity=0.357 Sum_probs=207.0
Q ss_pred hcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCCcchHHHHHHHHHHHhcCCCcceeEEeeeecccc-------
Q 039533 625 TSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHGASRSFIAECKALKSIRHRNLVKVLTACLGADY------- 697 (949)
Q Consensus 625 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~------- 697 (949)
..+|++.+.||+|+||.||+|++..+++.||+|+++... +.+.+|++++++++||||+++++++...++
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~ 85 (284)
T 2a19_B 10 GMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN----EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSK 85 (284)
T ss_dssp HHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS----GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC------
T ss_pred ccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc----HHHHHHHHHHHhCCCCCEEEEeeeEeccccCcccccc
Confidence 356889999999999999999999889999999997543 356789999999999999999998764322
Q ss_pred ----cCCccceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCee
Q 039533 698 ----RGNDFKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVL 773 (949)
Q Consensus 698 ----~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIl 773 (949)
......++||||+++++|.+++... ....+++..+..++.|++.||+|||++ +|+||||||+||+
T Consensus 86 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--------~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil 154 (284)
T 2a19_B 86 NSSRSKTKCLFIQMEFCDKGTLEQWIEKR--------RGEKLDKVLALELFEQITKGVDYIHSK---KLINRDLKPSNIF 154 (284)
T ss_dssp ---CCEEEEEEEEECCCCSCBHHHHHHHG--------GGSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEE
T ss_pred cccccCcceEEEEEeccCCCCHHHHHhhc--------cCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCCHHHEE
Confidence 1234579999999999999999621 234689999999999999999999987 9999999999999
Q ss_pred ecCCCceEEeecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccccccCchh
Q 039533 774 LDDYMTARVGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINL 853 (949)
Q Consensus 774 l~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~ 853 (949)
++.++.+||+|||.++......... ...||+.|+|||++.+..++.++||||||+++|||++|..||..... .
T Consensus 155 ~~~~~~~kl~Dfg~~~~~~~~~~~~---~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~----~ 227 (284)
T 2a19_B 155 LVDTKQVKIGDFGLVTSLKNDGKRT---RSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETSK----F 227 (284)
T ss_dssp EEETTEEEECCCTTCEESSCCSCCC---CCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHHHH----H
T ss_pred EcCCCCEEECcchhheecccccccc---ccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhHHH----H
Confidence 9999999999999998876543322 34589999999999998999999999999999999999998742110 0
Q ss_pred hhhccccCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHHhHH
Q 039533 854 HNFGRKALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHELQSIKN 933 (949)
Q Consensus 854 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~~ 933 (949)
...+.+..... ..+..+.+++.+|++.||++|||+.|+++.|+.+++
T Consensus 228 -----------~~~~~~~~~~~----------------------~~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~~ 274 (284)
T 2a19_B 228 -----------FTDLRDGIISD----------------------IFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKK 274 (284)
T ss_dssp -----------HHHHHTTCCCT----------------------TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHTC
T ss_pred -----------HHHhhcccccc----------------------cCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhh
Confidence 00000101100 123456789999999999999999999999999987
Q ss_pred hhccC
Q 039533 934 ILLGV 938 (949)
Q Consensus 934 ~~~~~ 938 (949)
+....
T Consensus 275 ~~~~~ 279 (284)
T 2a19_B 275 SPEKN 279 (284)
T ss_dssp -----
T ss_pred CCCcc
Confidence 75543
No 199
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00 E-value=8.5e-39 Score=368.10 Aligned_cols=249 Identities=21% Similarity=0.226 Sum_probs=192.6
Q ss_pred hcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecC---CCcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCc
Q 039533 625 TSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQ---HHGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGND 701 (949)
Q Consensus 625 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 701 (949)
.++|++.+.||+|+||.||+|++..+++.||||+++.. .......+.+|+.++++++||||+++++++...+
T Consensus 147 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~----- 221 (446)
T 4ejn_A 147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHD----- 221 (446)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETT-----
T ss_pred hHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCC-----
Confidence 46799999999999999999999999999999999743 2333456788999999999999999999986554
Q ss_pred cceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhh-CCCCCeEecCCCCCCeeecCCCce
Q 039533 702 FKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHH-DCQPVTAHCDLKPSNVLLDDYMTA 780 (949)
Q Consensus 702 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~-~~~~~ivHrDlkp~NIll~~~~~~ 780 (949)
..++||||+++|+|.+++. ....+++..+..++.|++.||+|||+ . +|+||||||+|||++.++.+
T Consensus 222 ~~~lv~e~~~~~~L~~~l~----------~~~~~~~~~~~~~~~qi~~aL~~LH~~~---giiHrDlkp~NIll~~~~~~ 288 (446)
T 4ejn_A 222 RLCFVMEYANGGELFFHLS----------RERVFSEDRARFYGAEIVSALDYLHSEK---NVVYRDLKLENLMLDKDGHI 288 (446)
T ss_dssp EEEEEECCCSSCBHHHHHH----------HHSCCCHHHHHHHHHHHHHHHHHHHHHT---CCCCCCCCGGGEEECSSSCE
T ss_pred EEEEEEeeCCCCcHHHHHH----------hcCCCCHHHHHHHHHHHHHHHHHHhhcC---CEEECCCCHHHEEECCCCCE
Confidence 7899999999999999986 23568999999999999999999997 6 89999999999999999999
Q ss_pred EEeecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhcccc
Q 039533 781 RVGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKA 860 (949)
Q Consensus 781 kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~ 860 (949)
||+|||+|+........ .....||+.|+|||++.+..++.++|||||||++|||++|+.||....... ...
T Consensus 289 kl~DFG~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~--~~~----- 359 (446)
T 4ejn_A 289 KITDFGLCKEGIKDGAT--MKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEK--LFE----- 359 (446)
T ss_dssp EECCCCCCCTTCC-------CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH--HHH-----
T ss_pred EEccCCCceeccCCCcc--cccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHH--HHH-----
Confidence 99999999864333222 124569999999999999999999999999999999999999996331110 000
Q ss_pred CCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCC-----CHHHHHH
Q 039533 861 LPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRT-----NMTNVVH 926 (949)
Q Consensus 861 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----s~~ev~~ 926 (949)
.+...... .+ ...+..+.+++.+|++.||++|| +++|+++
T Consensus 360 ------~i~~~~~~-~p-------------------~~~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~ 404 (446)
T 4ejn_A 360 ------LILMEEIR-FP-------------------RTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQ 404 (446)
T ss_dssp ------HHHHCCCC-CC-------------------TTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred ------HHHhCCCC-CC-------------------ccCCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHh
Confidence 00000000 00 02234678999999999999999 9999975
No 200
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00 E-value=1.8e-38 Score=350.99 Aligned_cols=252 Identities=21% Similarity=0.263 Sum_probs=196.6
Q ss_pred hcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCCcchHHHHHHHHHHHhc-CCCcceeEEeeeecccccCCccc
Q 039533 625 TSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHGASRSFIAECKALKSI-RHRNLVKVLTACLGADYRGNDFK 703 (949)
Q Consensus 625 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~ 703 (949)
.++|++.+.||+|+||.||+|.+..+++.||||+++.... ...+|++++.++ +||||+++++++.+.+ ..
T Consensus 21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~----~~~~E~~~l~~~~~hp~iv~~~~~~~~~~-----~~ 91 (342)
T 2qr7_A 21 TDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR----DPTEEIEILLRYGQHPNIITLKDVYDDGK-----YV 91 (342)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC----CCHHHHHHHHHHTTSTTBCCEEEEEECSS-----EE
T ss_pred cccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC----ChHHHHHHHHHhcCCCCcCeEEEEEEcCC-----EE
Confidence 4579999999999999999999999999999999975543 235688888888 7999999999976544 78
Q ss_pred eeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCC----Cc
Q 039533 704 ASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDY----MT 779 (949)
Q Consensus 704 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~----~~ 779 (949)
++||||+++|+|.+++. ....+++.++..++.|++.||+|||++ +|+||||||+||++.++ +.
T Consensus 92 ~lv~E~~~gg~L~~~i~----------~~~~~~~~~~~~~~~qi~~al~~lH~~---givHrDlkp~NIl~~~~~~~~~~ 158 (342)
T 2qr7_A 92 YVVTELMKGGELLDKIL----------RQKFFSEREASAVLFTITKTVEYLHAQ---GVVHRDLKPSNILYVDESGNPES 158 (342)
T ss_dssp EEEECCCCSCBHHHHHH----------TCTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSCSGGG
T ss_pred EEEEeCCCCCcHHHHHH----------HcCCCCHHHHHHHHHHHHHHHHHHHHC---CcEeccCCHHHEEEecCCCCcCe
Confidence 99999999999999986 234589999999999999999999988 99999999999998533 35
Q ss_pred eEEeecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhccc
Q 039533 780 ARVGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRK 859 (949)
Q Consensus 780 ~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~ 859 (949)
+||+|||+++......... ....||+.|+|||++.+..++.++|||||||++|||++|+.||....... .....
T Consensus 159 ~kl~Dfg~a~~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~--~~~~~-- 232 (342)
T 2qr7_A 159 IRICDFGFAKQLRAENGLL--MTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDT--PEEIL-- 232 (342)
T ss_dssp EEECCCTTCEECBCTTCCB--CCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSC--HHHHH--
T ss_pred EEEEECCCcccCcCCCCce--eccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCC--HHHHH--
Confidence 9999999998765443222 23468999999999988889999999999999999999999996421111 00000
Q ss_pred cCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 039533 860 ALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVH 926 (949)
Q Consensus 860 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 926 (949)
..+......... . .....+..+.+++.+|++.||++|||+.|+++
T Consensus 233 ------~~i~~~~~~~~~-------------~---~~~~~s~~~~~li~~~L~~dP~~R~t~~~il~ 277 (342)
T 2qr7_A 233 ------ARIGSGKFSLSG-------------G---YWNSVSDTAKDLVSKMLHVDPHQRLTAALVLR 277 (342)
T ss_dssp ------HHHHHCCCCCCS-------------T---TTTTSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred ------HHHccCCcccCc-------------c---ccccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 000000000000 0 00123456789999999999999999999876
No 201
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=4.1e-38 Score=374.74 Aligned_cols=261 Identities=22% Similarity=0.345 Sum_probs=204.4
Q ss_pred eeeeecCceEEEEEEc--CCCEEEEEEEEecCC-CcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCccceeEeee
Q 039533 633 LVGVGSFGSVYKGIID--EGRTTIAVKVFNLQH-HGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFKASVYEF 709 (949)
Q Consensus 633 ~lg~G~~g~Vy~~~~~--~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~ 709 (949)
.||+|+||.||+|.+. .++..||||+++... ....+.+.+|++++++++||||+++++++.. +..++||||
T Consensus 343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~------~~~~lv~E~ 416 (613)
T 2ozo_A 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA------EALMLVMEM 416 (613)
T ss_dssp EEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES------SSEEEEEEC
T ss_pred EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc------CCeEEEEEe
Confidence 7999999999999875 346789999997543 2345789999999999999999999999853 258999999
Q ss_pred ccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEeecccce
Q 039533 710 MHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVGDFGLAR 789 (949)
Q Consensus 710 ~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~DfG~a~ 789 (949)
+++|+|.+++.. ....+++.++..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++
T Consensus 417 ~~~g~L~~~l~~---------~~~~l~~~~~~~i~~qi~~~L~~LH~~---~iiHrDlkp~NILl~~~~~vkL~DFGla~ 484 (613)
T 2ozo_A 417 AGGGPLHKFLVG---------KREEIPVSNVAELLHQVSMGMKYLEEK---NFVHRNLAARNVLLVNRHYAKISDFGLSK 484 (613)
T ss_dssp CTTCBHHHHHTT---------CTTTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCSTTT
T ss_pred CCCCcHHHHHhh---------ccCCCCHHHHHHHHHHHHHHHHHHHHC---CEEcCcCCHHHEEEcCCCcEEEeeccCcc
Confidence 999999999962 234589999999999999999999988 89999999999999999999999999998
Q ss_pred ecCCCCC-ccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHh-CCCCCccccccCchhhhhccccCCCchhh
Q 039533 790 ILSPDHT-QTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVI-GKKPIDIMFEGDINLHNFGRKALPDDVMD 867 (949)
Q Consensus 790 ~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~ 867 (949)
....... ........+++.|+|||++.+..++.++|||||||++|||++ |+.||......+ .. +
T Consensus 485 ~~~~~~~~~~~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~--~~------------~ 550 (613)
T 2ozo_A 485 ALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPE--VM------------A 550 (613)
T ss_dssp TCC--------------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSHH--HH------------H
T ss_pred cccCCCceeeeccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHHH--HH------------H
Confidence 7654332 111112336689999999998899999999999999999998 999996432211 11 1
Q ss_pred hcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHHhHHhhccCCCCCC
Q 039533 868 IVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHELQSIKNILLGVELCPP 943 (949)
Q Consensus 868 ~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~~~~~~~~~~~~ 943 (949)
.+...... +....++..+.+++..||+.||++||++.||++.|+.+..+.....+-+.
T Consensus 551 ~i~~~~~~------------------~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~~~~~~~~~~s 608 (613)
T 2ozo_A 551 FIEQGKRM------------------ECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLASKVEGGS 608 (613)
T ss_dssp HHHTTCCC------------------CCCTTCCHHHHHHHHHTTCSSTTTSCCHHHHHHHHHHHHHHHSCSCCCSS
T ss_pred HHHcCCCC------------------CCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHHhccccCCcc
Confidence 11100000 00113456789999999999999999999999999999888777655443
No 202
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00 E-value=5.8e-38 Score=354.87 Aligned_cols=257 Identities=18% Similarity=0.208 Sum_probs=192.5
Q ss_pred hcCCCCC-CeeeeecCceEEEEEEcCCCEEEEEEEEecCCCcchHHHHHHHHHHHhc-CCCcceeEEeeeecccccCCcc
Q 039533 625 TSGFSSA-NLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHGASRSFIAECKALKSI-RHRNLVKVLTACLGADYRGNDF 702 (949)
Q Consensus 625 ~~~y~~~-~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~ 702 (949)
.++|.+. ++||+|+||+||+|.+..+++.||||+++. ...+.+|++++.+. +||||+++++++... +.+...
T Consensus 60 ~~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~-----~~~~~~E~~~~~~~~~hp~iv~l~~~~~~~-~~~~~~ 133 (400)
T 1nxk_A 60 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENL-YAGRKC 133 (400)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEE-ETTEEE
T ss_pred cccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCc-----chhHHHHHHHHHHhcCCCCcceEeEEEeec-ccCCcE
Confidence 3456665 689999999999999998999999999863 24677888887554 899999999987542 123447
Q ss_pred ceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecC---CCc
Q 039533 703 KASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDD---YMT 779 (949)
Q Consensus 703 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~---~~~ 779 (949)
.++||||+++|+|.+++... ....+++.++..|+.||+.||+|||+. +|+||||||+||+++. ++.
T Consensus 134 ~~lv~E~~~gg~L~~~l~~~--------~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~~ 202 (400)
T 1nxk_A 134 LLIVMECLDGGELFSRIQDR--------GDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAI 202 (400)
T ss_dssp EEEEEECCCSEEHHHHHHCC-----------CCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSTTCC
T ss_pred EEEEEEeCCCCcHHHHHHHh--------CCCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCcceEEEecCCCCcc
Confidence 89999999999999999731 124589999999999999999999987 9999999999999997 789
Q ss_pred eEEeecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhccc
Q 039533 780 ARVGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRK 859 (949)
Q Consensus 780 ~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~ 859 (949)
+||+|||+++........ ....||+.|+|||++.+..++.++|||||||++|||++|+.||........
T Consensus 203 ~kl~DFG~a~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~-------- 271 (400)
T 1nxk_A 203 LKLTDFGFAKETTSHNSL---TTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAI-------- 271 (400)
T ss_dssp EEECCCTTCEECC--------------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSS--------
T ss_pred EEEEecccccccCCCCcc---ccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccc--------
Confidence 999999999876543322 234589999999999999999999999999999999999999964322110
Q ss_pred cCCCchh-hhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHH
Q 039533 860 ALPDDVM-DIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHE 927 (949)
Q Consensus 860 ~~~~~~~-~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 927 (949)
..... .+....... + . +....++..+.+++.+||+.||++|||+.|+++.
T Consensus 272 --~~~~~~~i~~~~~~~-~------------~---~~~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~h 322 (400)
T 1nxk_A 272 --SPGMKTRIRMGQYEF-P------------N---PEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNH 322 (400)
T ss_dssp --CCSHHHHHHHTCCCC-C------------T---TTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred --cHHHHHHHHcCcccC-C------------C---cccccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 00000 000000000 0 0 0001234568899999999999999999999874
No 203
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00 E-value=2.3e-38 Score=342.01 Aligned_cols=253 Identities=22% Similarity=0.260 Sum_probs=195.4
Q ss_pred cCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCC-CcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCccce
Q 039533 626 SGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQH-HGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFKA 704 (949)
Q Consensus 626 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 704 (949)
++|.+.+.||+|+||.||+|++..+++.||+|++.... ....+.+.+|++++++++||||+++++++.... ..+
T Consensus 22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-----~~~ 96 (285)
T 3is5_A 22 DLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYH-----NMY 96 (285)
T ss_dssp HHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSS-----EEE
T ss_pred hheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCC-----eEE
Confidence 56889999999999999999999899999999997543 234578999999999999999999999976544 789
Q ss_pred eEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeee---cCCCceE
Q 039533 705 SVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLL---DDYMTAR 781 (949)
Q Consensus 705 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll---~~~~~~k 781 (949)
+||||+++|+|.+++... ......+++..+..++.|++.||+|||++ +|+||||||+||++ +.++.+|
T Consensus 97 lv~e~~~~~~L~~~l~~~------~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dikp~NIl~~~~~~~~~~k 167 (285)
T 3is5_A 97 IVMETCEGGELLERIVSA------QARGKALSEGYVAELMKQMMNALAYFHSQ---HVVHKDLKPENILFQDTSPHSPIK 167 (285)
T ss_dssp EEECCCSCCBHHHHHHHH------HHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEESSSSTTCCEE
T ss_pred EEEEeCCCCcHHHHHHhh------hhcccCCCHHHHHHHHHHHHHHHHHHHhC---CEEECCCCHHHEEEecCCCCCCEE
Confidence 999999999999988521 11235689999999999999999999987 99999999999999 4568899
Q ss_pred EeecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhccccC
Q 039533 782 VGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKAL 861 (949)
Q Consensus 782 l~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~ 861 (949)
|+|||+++........ ....||+.|+|||++. ..++.++||||||+++|||++|+.||......... .....
T Consensus 168 l~Dfg~a~~~~~~~~~---~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~~~~--~~~~~-- 239 (285)
T 3is5_A 168 IIDFGLAELFKSDEHS---TNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQ--QKATY-- 239 (285)
T ss_dssp ECCCCCCCC-------------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH--HHHHH--
T ss_pred EEeeecceecCCcccC---cCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCCHHHHH--hhhcc--
Confidence 9999999876543322 2345899999999876 46889999999999999999999999643211100 00000
Q ss_pred CCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 039533 862 PDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVH 926 (949)
Q Consensus 862 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 926 (949)
......... ...+..+.+++.+|++.||++|||++|+++
T Consensus 240 -------~~~~~~~~~-------------------~~~~~~~~~li~~~L~~dP~~Rps~~e~l~ 278 (285)
T 3is5_A 240 -------KEPNYAVEC-------------------RPLTPQAVDLLKQMLTKDPERRPSAAQVLH 278 (285)
T ss_dssp -------CCCCCCC---------------------CCCCHHHHHHHHHHTCSCTTTSCCHHHHHT
T ss_pred -------CCccccccc-------------------CcCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 000000000 012345788999999999999999999975
No 204
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00 E-value=3.3e-38 Score=366.71 Aligned_cols=254 Identities=22% Similarity=0.270 Sum_probs=203.5
Q ss_pred hcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCC---CcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCc
Q 039533 625 TSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQH---HGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGND 701 (949)
Q Consensus 625 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 701 (949)
.++|.+.++||+|+||.||+|++..+++.||||++.... ......+.+|+.++++++||||+++++++...+
T Consensus 183 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~----- 257 (576)
T 2acx_A 183 KNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKD----- 257 (576)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSS-----
T ss_pred ccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCC-----
Confidence 467899999999999999999999899999999997432 233467889999999999999999999976544
Q ss_pred cceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceE
Q 039533 702 FKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTAR 781 (949)
Q Consensus 702 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~k 781 (949)
..++||||+++|+|.+++... ....+++..++.++.||+.||+|||++ +|+||||||+||+++.++++|
T Consensus 258 ~l~lVmEy~~gg~L~~~l~~~--------~~~~l~e~~~~~i~~qIl~aL~yLH~~---gIvHrDLKPeNILld~~g~vK 326 (576)
T 2acx_A 258 ALCLVLTLMNGGDLKFHIYHM--------GQAGFPEARAVFYAAEICCGLEDLHRE---RIVYRDLKPENILLDDHGHIR 326 (576)
T ss_dssp EEEEEECCCCSCBHHHHHHSS--------SSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEE
T ss_pred EEEEEEEcCCCCcHHHHHHhc--------CCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCchheEEEeCCCCeE
Confidence 789999999999999998631 123489999999999999999999988 999999999999999999999
Q ss_pred EeecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhccccC
Q 039533 782 VGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKAL 861 (949)
Q Consensus 782 l~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~ 861 (949)
|+|||+|+......... ...||+.|+|||++.+..++.++|||||||++|||++|+.||......... .
T Consensus 327 L~DFGla~~~~~~~~~~---~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~~-~------- 395 (576)
T 2acx_A 327 ISDLGLAVHVPEGQTIK---GRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKR-E------- 395 (576)
T ss_dssp ECCCTTCEECCTTCCEE---CCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCCH-H-------
T ss_pred EEecccceecccCcccc---ccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchhH-H-------
Confidence 99999998876543322 346999999999999999999999999999999999999999643211100 0
Q ss_pred CCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCC-----CHHHHHH
Q 039533 862 PDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRT-----NMTNVVH 926 (949)
Q Consensus 862 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----s~~ev~~ 926 (949)
.+...+.......+ ...+..+.+++.+|++.||++|| +++||++
T Consensus 396 --~i~~~i~~~~~~~p-------------------~~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~ 444 (576)
T 2acx_A 396 --EVERLVKEVPEEYS-------------------ERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKE 444 (576)
T ss_dssp --HHHHHHHHCCCCCC-------------------TTSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHT
T ss_pred --HHHHHhhcccccCC-------------------ccCCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHh
Confidence 00010000000000 12245678999999999999999 7788864
No 205
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00 E-value=1.5e-38 Score=355.36 Aligned_cols=279 Identities=19% Similarity=0.211 Sum_probs=186.1
Q ss_pred hcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCC--cchHHHHHHHHHHHhcCCCcceeEEeeeeccc-ccCCc
Q 039533 625 TSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHH--GASRSFIAECKALKSIRHRNLVKVLTACLGAD-YRGND 701 (949)
Q Consensus 625 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~-~~~~~ 701 (949)
.++|++.+.||+|+||.||+|.+..+++.||||++..... ...+++.+|++++++++||||+++++++.... .....
T Consensus 28 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~ 107 (367)
T 2fst_X 28 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFN 107 (367)
T ss_dssp ETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred CCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCC
Confidence 4689999999999999999999998999999999864322 33467889999999999999999999986532 22334
Q ss_pred cceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceE
Q 039533 702 FKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTAR 781 (949)
Q Consensus 702 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~k 781 (949)
..++||||+ +++|.+++. ...+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+|
T Consensus 108 ~~~lv~e~~-~~~L~~~~~-----------~~~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~k 172 (367)
T 2fst_X 108 DVYLVTHLM-GADLNNIVK-----------CQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELK 172 (367)
T ss_dssp CCEEEEECC-CEECC----------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEE
T ss_pred eEEEEeccc-CCCHHHHHh-----------cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHhhEEECCCCCEE
Confidence 679999999 689988885 24589999999999999999999987 999999999999999999999
Q ss_pred EeecccceecCCCCCccccccccCccCccCccccCC-CccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhcccc
Q 039533 782 VGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVG-CEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKA 860 (949)
Q Consensus 782 l~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~ 860 (949)
|+|||+++...... ....||..|+|||++.+ ..++.++||||+||++|||++|+.||......+ .+.... ..
T Consensus 173 L~DFG~a~~~~~~~-----~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~-~l~~i~-~~ 245 (367)
T 2fst_X 173 ILDFGLARHTADEM-----TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID-QLKLIL-RL 245 (367)
T ss_dssp ECC--------------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHH-HH
T ss_pred EeeccccccccccC-----CCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHH-HH
Confidence 99999998754332 23468999999999877 678999999999999999999999996432211 010000 00
Q ss_pred CCCchhhhcccCCCCCchhhhhhhchhhhhhhhh-hHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 039533 861 LPDDVMDIVDSSLLPDDEDLILTGNQRQKQARIN-SIIECLISMVRIGVACSMELPQDRTNMTNVVH 926 (949)
Q Consensus 861 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 926 (949)
......+.+...........+.. ....+...+. .....+..+.+++.+|++.||++|||+.|+++
T Consensus 246 ~g~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~ 311 (367)
T 2fst_X 246 VGTPGAELLKKISSESARNYIQS-LTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA 311 (367)
T ss_dssp HCSCCHHHHTTCCCHHHHHHHHT-SCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred hCCCCHHHHHHhhhHHHHHHHhc-cCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhc
Confidence 00000000000000000000000 0000000000 01123456889999999999999999999986
No 206
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00 E-value=2.8e-38 Score=348.72 Aligned_cols=271 Identities=24% Similarity=0.332 Sum_probs=206.8
Q ss_pred hcCCCCCCeeeeecCceEEEEEEcCCCEEE--EEEEEecCC-CcchHHHHHHHHHHHhc-CCCcceeEEeeeecccccCC
Q 039533 625 TSGFSSANLVGVGSFGSVYKGIIDEGRTTI--AVKVFNLQH-HGASRSFIAECKALKSI-RHRNLVKVLTACLGADYRGN 700 (949)
Q Consensus 625 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~v--avK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~ 700 (949)
.++|++.+.||+|+||.||+|++..++..+ |+|+++... ....+.+.+|+++++++ +||||+++++++...+
T Consensus 24 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~---- 99 (327)
T 1fvr_A 24 WNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRG---- 99 (327)
T ss_dssp GGGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETT----
T ss_pred HHHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCC----
Confidence 367899999999999999999998778755 999987432 23446789999999999 8999999999976544
Q ss_pred ccceeEeeeccCCChhhhcCCCCCCC------ccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeee
Q 039533 701 DFKASVYEFMHYGSLEEWLHPFTGED------EIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLL 774 (949)
Q Consensus 701 ~~~~lv~e~~~~gsL~~~l~~~~~~~------~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll 774 (949)
..++||||+++++|.+++....... ........+++.+++.++.|++.||+|||++ +|+||||||+||++
T Consensus 100 -~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~ 175 (327)
T 1fvr_A 100 -YLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILV 175 (327)
T ss_dssp -EEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEE
T ss_pred -ceEEEEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCccceEEE
Confidence 7899999999999999997321000 0001234689999999999999999999987 99999999999999
Q ss_pred cCCCceEEeecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHh-CCCCCccccccCchh
Q 039533 775 DDYMTARVGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVI-GKKPIDIMFEGDINL 853 (949)
Q Consensus 775 ~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~ellt-g~~Pf~~~~~~~~~~ 853 (949)
+.++.+||+|||+++....... .....++..|+|||++.+..++.++|||||||++|||++ |+.||....... .
T Consensus 176 ~~~~~~kL~Dfg~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~--~ 250 (327)
T 1fvr_A 176 GENYVAKIADFGLSRGQEVYVK---KTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAE--L 250 (327)
T ss_dssp CGGGCEEECCTTCEESSCEECC---C----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH--H
T ss_pred cCCCeEEEcccCcCcccccccc---ccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcHHH--H
Confidence 9999999999999975332211 112347889999999988889999999999999999998 999996432111 0
Q ss_pred hhhccccCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHHhHH
Q 039533 854 HNFGRKALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHELQSIKN 933 (949)
Q Consensus 854 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~~ 933 (949)
.. .+........ ...++..+.+++.+|++.||++|||++|+++.|+++.+
T Consensus 251 ~~------------~~~~~~~~~~------------------~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~ 300 (327)
T 1fvr_A 251 YE------------KLPQGYRLEK------------------PLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLE 300 (327)
T ss_dssp HH------------HGGGTCCCCC------------------CTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HH------------HhhcCCCCCC------------------CCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence 00 0000000000 01234568899999999999999999999999999887
Q ss_pred hhccC
Q 039533 934 ILLGV 938 (949)
Q Consensus 934 ~~~~~ 938 (949)
.....
T Consensus 301 ~~~~~ 305 (327)
T 1fvr_A 301 ERKTY 305 (327)
T ss_dssp SSSCS
T ss_pred hhcCc
Confidence 65443
No 207
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00 E-value=4.7e-38 Score=347.54 Aligned_cols=267 Identities=19% Similarity=0.211 Sum_probs=202.2
Q ss_pred hcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCCcchHHHHHHHHHHHhcC-CCcceeEEeeeecccccCCccc
Q 039533 625 TSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHGASRSFIAECKALKSIR-HRNLVKVLTACLGADYRGNDFK 703 (949)
Q Consensus 625 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~~~~ 703 (949)
.++|++.+.||+|+||.||+|++..+++.||||+++.. ..+.+.+|+.++++++ ||||+++++++.... ....
T Consensus 35 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~---~~~~ 108 (330)
T 3nsz_A 35 QDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV---KKKKIKREIKILENLRGGPNIITLADIVKDPV---SRTP 108 (330)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC---CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTT---TCCE
T ss_pred CCceEEEEEecccCCeEEEEEEECCCCcEEEEEEeccc---chHHHHHHHHHHHHcCCCCCEEEeeeeeccCC---CCce
Confidence 36789999999999999999999889999999998643 3467899999999997 999999999986422 3468
Q ss_pred eeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCC-ceEE
Q 039533 704 ASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYM-TARV 782 (949)
Q Consensus 704 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~-~~kl 782 (949)
++||||+++++|.+++. .+++.++..++.|++.||+|||++ +|+||||||+||+++.++ .+||
T Consensus 109 ~lv~e~~~~~~l~~~~~-------------~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~~kl 172 (330)
T 3nsz_A 109 ALVFEHVNNTDFKQLYQ-------------TLTDYDIRFYMYEILKALDYCHSM---GIMHRDVKPHNVMIDHEHRKLRL 172 (330)
T ss_dssp EEEEECCCCCCHHHHGG-------------GCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEEEE
T ss_pred EEEEeccCchhHHHHHH-------------hCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEEcCCCCEEEE
Confidence 99999999999999885 278889999999999999999987 899999999999999776 8999
Q ss_pred eecccceecCCCCCccccccccCccCccCccccCC-CccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhccccC
Q 039533 783 GDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVG-CEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKAL 861 (949)
Q Consensus 783 ~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~ 861 (949)
+|||+++......... ...||..|+|||++.+ ..++.++|||||||++|||++|+.||.........+.......-
T Consensus 173 ~Dfg~a~~~~~~~~~~---~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~ 249 (330)
T 3nsz_A 173 IDWGLAEFYHPGQEYN---VRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLG 249 (330)
T ss_dssp CCCTTCEECCTTCCCC---SCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHC
T ss_pred EeCCCceEcCCCCccc---cccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhcC
Confidence 9999998776544322 3458999999999877 56899999999999999999999999543222111111111100
Q ss_pred CCc---------------hhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 039533 862 PDD---------------VMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVH 926 (949)
Q Consensus 862 ~~~---------------~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 926 (949)
.+. ..+...........+. .........+..+.+++.+|++.||++|||++|+++
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~ 319 (330)
T 3nsz_A 250 TEDLYDYIDKYNIELDPRFNDILGRHSRKRWERF----------VHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAME 319 (330)
T ss_dssp HHHHHHHHHHTTCCCCTHHHHHHCCCCCCCGGGG----------CCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred CchhhhHHHHhccccccchhhhhhhccccchhhh----------ccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 111 1111111111100000 000001123567899999999999999999999986
No 208
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00 E-value=2.1e-38 Score=349.71 Aligned_cols=277 Identities=22% Similarity=0.278 Sum_probs=193.1
Q ss_pred HHhcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCC--cchHHHHHHHHHHHhcCCCcceeEEeeeecccccCC
Q 039533 623 NATSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHH--GASRSFIAECKALKSIRHRNLVKVLTACLGADYRGN 700 (949)
Q Consensus 623 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 700 (949)
...++|++.+.||+|+||+||+|++..+++.||||+++.... ...+.+.+|+.++++++||||+++++++...+
T Consensus 31 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~---- 106 (329)
T 3gbz_A 31 TSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNH---- 106 (329)
T ss_dssp -CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETT----
T ss_pred cchhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCC----
Confidence 345789999999999999999999999999999999974432 22456789999999999999999999976544
Q ss_pred ccceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeee-----c
Q 039533 701 DFKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLL-----D 775 (949)
Q Consensus 701 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll-----~ 775 (949)
..++||||+++ +|.+++. ....+++..+..|+.|++.||+|||++ +|+||||||+||++ +
T Consensus 107 -~~~lv~e~~~~-~L~~~~~----------~~~~~~~~~~~~i~~ql~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~ 171 (329)
T 3gbz_A 107 -RLHLIFEYAEN-DLKKYMD----------KNPDVSMRVIKSFLYQLINGVNFCHSR---RCLHRDLKPQNLLLSVSDAS 171 (329)
T ss_dssp -EEEEEEECCSE-EHHHHHH----------HCTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEC----
T ss_pred -EEEEEEecCCC-CHHHHHh----------hcCCCCHHHHHHHHHHHHHHHHHHHhC---CEECCCCCHHHEEEecCCCC
Confidence 78999999984 9999986 234589999999999999999999987 99999999999999 4
Q ss_pred CCCceEEeecccceecCCCCCccccccccCccCccCccccCCC-ccCCccchHHHHHHHHHHHhCCCCCccccccCchhh
Q 039533 776 DYMTARVGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGC-EVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLH 854 (949)
Q Consensus 776 ~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~ 854 (949)
+++.+||+|||+++......... ....||..|+|||++.+. .++.++|||||||++|||++|+.||......+....
T Consensus 172 ~~~~~kl~Dfg~a~~~~~~~~~~--~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~ 249 (329)
T 3gbz_A 172 ETPVLKIGDFGLARAFGIPIRQF--THEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFK 249 (329)
T ss_dssp -CCEEEECCTTHHHHHC-------------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH
T ss_pred ccceEEECcCCCccccCCccccc--CCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHHHHHH
Confidence 55569999999998765433221 234589999999998875 489999999999999999999999964422211100
Q ss_pred hhccccCCCc--hhhhcc-cCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 039533 855 NFGRKALPDD--VMDIVD-SSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVH 926 (949)
Q Consensus 855 ~~~~~~~~~~--~~~~~d-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 926 (949)
.......+.. ...... +....... ..... .............+.+++.+|++.||++|||++|+++
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~--~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 318 (329)
T 3gbz_A 250 IFEVLGLPDDTTWPGVTALPDWKQSFP----KFRGK--TLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALE 318 (329)
T ss_dssp HHHHHCCCCTTTSTTGGGSTTCCTTCC----CCCCC--CHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred HHHHhCCCchhhhhhhhhhhhhhhhhh----hhccc--cHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhC
Confidence 0000000000 000000 00000000 00000 0000000113456789999999999999999999975
No 209
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00 E-value=4.6e-38 Score=341.53 Aligned_cols=250 Identities=21% Similarity=0.272 Sum_probs=203.2
Q ss_pred hcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCC---CcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCc
Q 039533 625 TSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQH---HGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGND 701 (949)
Q Consensus 625 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 701 (949)
.++|.+.+.||+|+||.||+|++..+++.||+|++.... ....+.+.+|+.++++++||||+++++++...+
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~----- 88 (294)
T 2rku_A 14 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDND----- 88 (294)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSS-----
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCC-----
Confidence 357889999999999999999999889999999997543 223467889999999999999999999976544
Q ss_pred cceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceE
Q 039533 702 FKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTAR 781 (949)
Q Consensus 702 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~k 781 (949)
..++||||+++++|.+++. ....+++.++..++.|++.||+|||++ +|+||||||+||+++.++.+|
T Consensus 89 ~~~lv~e~~~~~~L~~~~~----------~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~k 155 (294)
T 2rku_A 89 FVFVVLELCRRRSLLELHK----------RRKALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVK 155 (294)
T ss_dssp EEEEEEECCTTCBHHHHHH----------HHCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEE
T ss_pred EEEEEEecCCCCCHHHHHH----------hcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEcCCCCEE
Confidence 7899999999999999886 234689999999999999999999987 999999999999999999999
Q ss_pred EeecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhccccC
Q 039533 782 VGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKAL 861 (949)
Q Consensus 782 l~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~ 861 (949)
|+|||.++......... ....||+.|+|||++.+..++.++||||||+++|||++|+.||......+. .
T Consensus 156 l~dfg~~~~~~~~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~-~-------- 224 (294)
T 2rku_A 156 IGDFGLATKVEYDGERK--KVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKET-Y-------- 224 (294)
T ss_dssp ECCCTTCEECCSTTCCB--CCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHH-H--------
T ss_pred EEeccCceecccCcccc--ccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH-H--------
Confidence 99999998765433222 234589999999999998899999999999999999999999964321110 0
Q ss_pred CCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHH
Q 039533 862 PDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHE 927 (949)
Q Consensus 862 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 927 (949)
..+..... ..+ ...+..+.+++.+|++.||++|||++|+++.
T Consensus 225 ----~~~~~~~~-~~~-------------------~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~ 266 (294)
T 2rku_A 225 ----LRIKKNEY-SIP-------------------KHINPVAASLIQKMLQTDPTARPTINELLND 266 (294)
T ss_dssp ----HHHHTTCC-CCC-------------------TTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred ----HHHhhccC-CCc-------------------cccCHHHHHHHHHHcccChhhCcCHHHHhhC
Confidence 00000000 000 0123457889999999999999999999874
No 210
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00 E-value=4.1e-38 Score=343.64 Aligned_cols=251 Identities=21% Similarity=0.223 Sum_probs=199.2
Q ss_pred hcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCCcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCccce
Q 039533 625 TSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFKA 704 (949)
Q Consensus 625 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 704 (949)
.++|.+.+.||+|+||.||+|++..+++.||+|+++.......+.+.+|+.++++++||||+++++++...+ ..+
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-----~~~ 82 (304)
T 2jam_A 8 RKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTT-----HYY 82 (304)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECSS-----EEE
T ss_pred hccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccCC-----EEE
Confidence 357889999999999999999999899999999998655445567899999999999999999999976544 789
Q ss_pred eEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeee---cCCCceE
Q 039533 705 SVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLL---DDYMTAR 781 (949)
Q Consensus 705 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll---~~~~~~k 781 (949)
+||||+++++|.+++. ....+++..+..++.|++.||+|||+. +|+||||||+||++ +.++.+|
T Consensus 83 lv~e~~~~~~L~~~l~----------~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dikp~NIl~~~~~~~~~~k 149 (304)
T 2jam_A 83 LVMQLVSGGELFDRIL----------ERGVYTEKDASLVIQQVLSAVKYLHEN---GIVHRDLKPENLLYLTPEENSKIM 149 (304)
T ss_dssp EEECCCCSCBHHHHHH----------HHSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCSCCGGGCEESSSSTTCCEE
T ss_pred EEEEcCCCccHHHHHH----------HcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEecCCCCCCEE
Confidence 9999999999999986 234589999999999999999999987 99999999999999 7889999
Q ss_pred EeecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhccccC
Q 039533 782 VGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKAL 861 (949)
Q Consensus 782 l~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~ 861 (949)
|+|||.++....... ....||+.|+|||++.+..++.++|||||||++|||++|+.||....... ....
T Consensus 150 l~Dfg~~~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~--~~~~----- 218 (304)
T 2jam_A 150 ITDFGLSKMEQNGIM----STACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETESK--LFEK----- 218 (304)
T ss_dssp BCSCSTTCCCCCBTT----HHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHHH--HHHH-----
T ss_pred EccCCcceecCCCcc----ccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHH--HHHH-----
Confidence 999999976443221 12358999999999999899999999999999999999999996432110 0000
Q ss_pred CCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 039533 862 PDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVH 926 (949)
Q Consensus 862 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 926 (949)
+......... +.....+..+.+++.+|++.||++|||++|+++
T Consensus 219 ------i~~~~~~~~~----------------~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 261 (304)
T 2jam_A 219 ------IKEGYYEFES----------------PFWDDISESAKDFICHLLEKDPNERYTCEKALS 261 (304)
T ss_dssp ------HHHCCCCCCT----------------TTTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred ------HHcCCCCCCc----------------cccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 0000000000 000123456889999999999999999999986
No 211
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00 E-value=9.5e-38 Score=349.22 Aligned_cols=257 Identities=20% Similarity=0.302 Sum_probs=203.5
Q ss_pred HHHHHhcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCCc--------chHHHHHHHHHHHhc-CCCcceeEEe
Q 039533 620 DLYNATSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHG--------ASRSFIAECKALKSI-RHRNLVKVLT 690 (949)
Q Consensus 620 ~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~--------~~~~~~~E~~~l~~l-~h~niv~~~~ 690 (949)
......++|.+.+.||+|+||.||+|++..+|+.||||+++..... ..+.+.+|+.+++++ +||||+++++
T Consensus 88 ~~~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~ 167 (365)
T 2y7j_A 88 AAKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLID 167 (365)
T ss_dssp HHHHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEE
T ss_pred hhhhhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEE
Confidence 3344557899999999999999999999888999999999754421 135678999999999 7999999999
Q ss_pred eeecccccCCccceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCC
Q 039533 691 ACLGADYRGNDFKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPS 770 (949)
Q Consensus 691 ~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~ 770 (949)
++.... ..++||||+++++|.+++. ....+++..+..++.|++.||.|||+. +|+||||||+
T Consensus 168 ~~~~~~-----~~~lv~e~~~g~~L~~~l~----------~~~~l~~~~~~~i~~qi~~~L~~LH~~---gi~H~Dlkp~ 229 (365)
T 2y7j_A 168 SYESSS-----FMFLVFDLMRKGELFDYLT----------EKVALSEKETRSIMRSLLEAVSFLHAN---NIVHRDLKPE 229 (365)
T ss_dssp EEEBSS-----EEEEEECCCTTCBHHHHHH----------HHSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGG
T ss_pred EEeeCC-----EEEEEEEeCCCCcHHHHHH----------hcCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHH
Confidence 976544 7899999999999999986 234689999999999999999999987 9999999999
Q ss_pred CeeecCCCceEEeecccceecCCCCCccccccccCccCccCccccCC------CccCCccchHHHHHHHHHHHhCCCCCc
Q 039533 771 NVLLDDYMTARVGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVG------CEVSTNGDVYSYGILLLELVIGKKPID 844 (949)
Q Consensus 771 NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~~~~sDiwSlGvvl~elltg~~Pf~ 844 (949)
||+++.++.+||+|||++.......... ...||+.|+|||++.+ ..++.++|||||||++|||++|+.||.
T Consensus 230 NIl~~~~~~ikl~DfG~~~~~~~~~~~~---~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~ 306 (365)
T 2y7j_A 230 NILLDDNMQIRLSDFGFSCHLEPGEKLR---ELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFW 306 (365)
T ss_dssp GEEECTTCCEEECCCTTCEECCTTCCBC---CCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSC
T ss_pred HEEECCCCCEEEEecCcccccCCCcccc---cCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCC
Confidence 9999999999999999998876543322 3569999999998753 358899999999999999999999995
Q ss_pred cccccCchhhhhccccCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHH
Q 039533 845 IMFEGDINLHNFGRKALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNV 924 (949)
Q Consensus 845 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev 924 (949)
..... ... ..+........ .+.....+..+.+++.+|++.||++|||+.|+
T Consensus 307 ~~~~~--~~~-----------~~i~~~~~~~~----------------~~~~~~~~~~~~~li~~~L~~dP~~Rps~~el 357 (365)
T 2y7j_A 307 HRRQI--LML-----------RMIMEGQYQFS----------------SPEWDDRSSTVKDLISRLLQVDPEARLTAEQA 357 (365)
T ss_dssp CSSHH--HHH-----------HHHHHTCCCCC----------------HHHHSSSCHHHHHHHHHHSCSSTTTSCCHHHH
T ss_pred CCCHH--HHH-----------HHHHhCCCCCC----------------CcccccCCHHHHHHHHHHcCCChhHCcCHHHH
Confidence 32111 000 00000000000 00011234568899999999999999999999
Q ss_pred HH
Q 039533 925 VH 926 (949)
Q Consensus 925 ~~ 926 (949)
++
T Consensus 358 l~ 359 (365)
T 2y7j_A 358 LQ 359 (365)
T ss_dssp HH
T ss_pred hc
Confidence 86
No 212
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00 E-value=7.9e-39 Score=352.36 Aligned_cols=283 Identities=19% Similarity=0.251 Sum_probs=197.1
Q ss_pred cCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCCc-chHHHHHHHHHHHhcCCCcceeEEeeeecccccCCccce
Q 039533 626 SGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHG-ASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFKA 704 (949)
Q Consensus 626 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 704 (949)
++|.+.+.||+|+||+||+|++..+++.||||+++..... ....+.+|++++++++||||+++++++...+ ..+
T Consensus 2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-----~~~ 76 (324)
T 3mtl_A 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEK-----SLT 76 (324)
T ss_dssp CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSS-----CEE
T ss_pred CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCC-----EEE
Confidence 5789999999999999999999989999999999744322 2234567999999999999999999976544 789
Q ss_pred eEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEee
Q 039533 705 SVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVGD 784 (949)
Q Consensus 705 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~D 784 (949)
+||||++ |+|.+++.. ....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|
T Consensus 77 lv~e~~~-~~l~~~~~~---------~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~D 143 (324)
T 3mtl_A 77 LVFEYLD-KDLKQYLDD---------CGNIINMHNVKLFLFQLLRGLAYCHRQ---KVLHRDLKPQNLLINERGELKLAD 143 (324)
T ss_dssp EEEECCS-EEHHHHHHH---------TTTCCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCCGGGEEECTTCCEEECS
T ss_pred EEecccc-cCHHHHHHh---------cCCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCcCHHHEEECCCCCEEEcc
Confidence 9999997 589888862 234589999999999999999999987 999999999999999999999999
Q ss_pred cccceecCCCCCccccccccCccCccCccccCC-CccCCccchHHHHHHHHHHHhCCCCCccccccCch--hhhhccccC
Q 039533 785 FGLARILSPDHTQTSSFSVKGSLGYIAPEYGVG-CEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDIN--LHNFGRKAL 861 (949)
Q Consensus 785 fG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~--~~~~~~~~~ 861 (949)
||+++......... ....||+.|+|||++.+ ..++.++||||+||++|||++|+.||......+.. .........
T Consensus 144 fg~a~~~~~~~~~~--~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~ 221 (324)
T 3mtl_A 144 FGLARAKSIPTKTY--DNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPT 221 (324)
T ss_dssp SSEEECC--------------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCC
T ss_pred CcccccccCCcccc--ccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCC
Confidence 99998654332221 13458999999999876 56899999999999999999999999644221110 000000000
Q ss_pred CCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH--HHHHhHH
Q 039533 862 PDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVH--ELQSIKN 933 (949)
Q Consensus 862 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~--~L~~i~~ 933 (949)
++.+....... ... ......................+.+++.+|++.||++|||++|+++ .+.++.+
T Consensus 222 ~~~~~~~~~~~----~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~~ 290 (324)
T 3mtl_A 222 EETWPGILSNE----EFK-TYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKHPFFLSLGE 290 (324)
T ss_dssp TTTSTTGGGCH----HHH-HTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTSGGGGGGCS
T ss_pred hHhchhhhcch----hhc-ccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhcChhhhhccc
Confidence 11011100000 000 0000000000001111133456789999999999999999999987 4444433
No 213
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00 E-value=3.8e-38 Score=355.35 Aligned_cols=251 Identities=21% Similarity=0.322 Sum_probs=191.7
Q ss_pred cCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCC--cchHHHHHHHHHHHhcC--CCcceeEEeeeecccccCCc
Q 039533 626 SGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHH--GASRSFIAECKALKSIR--HRNLVKVLTACLGADYRGND 701 (949)
Q Consensus 626 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~--h~niv~~~~~~~~~~~~~~~ 701 (949)
.+|++.+.||+|+||.||+|.+. +++.||||++..... ...+.+.+|++++++++ ||||+++++++...+
T Consensus 56 ~~y~~~~~LG~G~fg~Vy~~~~~-~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~----- 129 (390)
T 2zmd_A 56 RIYSILKQIGSGGSSKVFQVLNE-KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQ----- 129 (390)
T ss_dssp EEEEEEEEEECCSSEEEEEEECT-TCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSS-----
T ss_pred CceEEEEEEccCCCeEEEEEEcC-CCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCC-----
Confidence 45899999999999999999987 488999999975432 23467899999999996 599999999976554
Q ss_pred cceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceE
Q 039533 702 FKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTAR 781 (949)
Q Consensus 702 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~k 781 (949)
..++||| +.+++|.+++. ....+++.++..++.||+.||+|||++ +|+||||||+||+++ ++.+|
T Consensus 130 ~~~lv~E-~~~~~L~~~l~----------~~~~~~~~~~~~i~~qi~~aL~~lH~~---~ivHrDlkp~NIll~-~~~~k 194 (390)
T 2zmd_A 130 YIYMVME-CGNIDLNSWLK----------KKKSIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLK 194 (390)
T ss_dssp EEEEEEE-CCSEEHHHHHH----------HCSSCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCCGGGEEES-SSCEE
T ss_pred EEEEEEe-cCCCCHHHHHH----------hcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHEEEE-CCeEE
Confidence 6899999 56889999996 234688999999999999999999977 999999999999996 57999
Q ss_pred EeecccceecCCCCCccccccccCccCccCccccCC-----------CccCCccchHHHHHHHHHHHhCCCCCccccccC
Q 039533 782 VGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVG-----------CEVSTNGDVYSYGILLLELVIGKKPIDIMFEGD 850 (949)
Q Consensus 782 l~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----------~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~ 850 (949)
|+|||+++...............||+.|+|||++.+ ..++.++|||||||++|||++|+.||.......
T Consensus 195 l~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~ 274 (390)
T 2zmd_A 195 LIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQI 274 (390)
T ss_dssp ECCCSSSCCC---------CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCHH
T ss_pred EEecCccccccCCCccccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHHH
Confidence 999999987755443322234569999999999865 368899999999999999999999996432111
Q ss_pred chhhhhccccCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHH
Q 039533 851 INLHNFGRKALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHE 927 (949)
Q Consensus 851 ~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 927 (949)
.. ...+++........ ...+..+.+++.+||+.||++|||+.|+++.
T Consensus 275 ~~------------~~~~~~~~~~~~~~------------------~~~~~~~~~li~~~L~~dP~~Rps~~ell~h 321 (390)
T 2zmd_A 275 SK------------LHAIIDPNHEIEFP------------------DIPEKDLQDVLKCCLKRDPKQRISIPELLAH 321 (390)
T ss_dssp HH------------HHHHHCTTSCCCCC------------------CCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred HH------------HHHHhCccccCCCC------------------ccchHHHHHHHHHHcccChhhCCCHHHHhhC
Confidence 11 11111111111000 0113457889999999999999999999753
No 214
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=5.2e-37 Score=357.25 Aligned_cols=317 Identities=22% Similarity=0.180 Sum_probs=223.4
Q ss_pred cCCCCCCccccCCCCCCCCCceeeccCceeccccCCcccCcccCcEEeeccccccCcCCCCCCCCccceeecCCCccccc
Q 039533 72 LRSLKLAGSVSHFIGNLSFLKQLYLQVNSFTHEIPSEIGGLRRLKVLALNNNSICGEIPTNISRCSTLIPIHPQNNQLVG 151 (949)
Q Consensus 72 l~~~~l~g~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~ 151 (949)
.++++++ .+|..+. ++++.|+|++|++++..|..|.++++|++|+|++|.+++..|..|+++++|++|+|++|+++.
T Consensus 18 c~~~~l~-~ip~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~ 94 (477)
T 2id5_A 18 CHRKRFV-AVPEGIP--TETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKL 94 (477)
T ss_dssp CCSCCCS-SCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCS
T ss_pred eCCCCcC-cCCCCCC--CCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCcCCc
Confidence 3344454 4555443 588999999999998888899999999999999999998888889999999888888888888
Q ss_pred cccccccCCCCCcEEECCCCCCCCCCCCCcCCCCCccEEeccccccCCCCCCcccCCCccccccccCcccccccccccCC
Q 039533 152 KILSRFSSLSKTEILNLGSNHLTGSIPSSLGNLSSIHTISLAYNNLDGTIPNSFGWFENLVFLSLAANNLSVVENKLTGE 231 (949)
Q Consensus 152 ~~~~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~l~~~ 231 (949)
..+..|.++++|++|+|++|++++..|..|.++++|++|+|++|++++..|..|.++++|++|+|++|+++.++
T Consensus 95 ~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~------ 168 (477)
T 2id5_A 95 IPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIP------ 168 (477)
T ss_dssp CCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCC------
T ss_pred cCcccccCCCCCCEEECCCCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCcccC------
Confidence 87788888888888888888888777888888888888888888888777777777777777777776654332
Q ss_pred CCChhhhccccccccccCCCCCCCCCCcchhccccccCcccEEEccCCCCCccCCchhhcccccccEEEccCccccCCCC
Q 039533 232 VPSLEKLQRLQHFTITSNSLGSGGNDDLSFLCSLTNATRLTWMHINSNNFGGLLPGCISNLSKTIKTLFLNNNKIYGSIP 311 (949)
Q Consensus 232 ~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~~~~L~~L~L~~N~l~~~~p~~~~~l~~~L~~L~L~~N~l~~~~~ 311 (949)
+..+..+ ++|+.|+|++|.+.+..+
T Consensus 169 ------------------------------------------------------~~~l~~l-~~L~~L~l~~n~i~~~~~ 193 (477)
T 2id5_A 169 ------------------------------------------------------TEALSHL-HGLIVLRLRHLNINAIRD 193 (477)
T ss_dssp ------------------------------------------------------HHHHTTC-TTCCEEEEESCCCCEECT
T ss_pred ------------------------------------------------------hhHhccc-CCCcEEeCCCCcCcEeCh
Confidence 1222222 235555555555555555
Q ss_pred CCCCCCCcccEEEeecceecccCCCcccccCCCCEEecCCcccccccCcccccccccceeecccccccccCCCCCCCCCC
Q 039533 312 AGIGNFVNLQRLDMWNNQLSGTIPPAIGELQNLKILGLNRNKLSGNIPPSIGNLKMLLNLFLNDNFLEVSIPSSLGQCES 391 (949)
Q Consensus 312 ~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 391 (949)
..|..+++|++|++++|.+.+.+|..+....+|+.|+|++|++++..+..|.++++|+.|+|++|.+++..+..|.++++
T Consensus 194 ~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~ 273 (477)
T 2id5_A 194 YSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLR 273 (477)
T ss_dssp TCSCSCTTCCEEEEECCTTCCEECTTTTTTCCCSEEEEESSCCCSCCHHHHTTCTTCCEEECCSSCCCEECTTSCTTCTT
T ss_pred hhcccCcccceeeCCCCccccccCcccccCccccEEECcCCcccccCHHHhcCccccCeeECCCCcCCccChhhcccccc
Confidence 55666666666666666655555555555556666666666666433345666666666666666666666666666666
Q ss_pred CcEEEeeCccccCCCCCcccCCcccceeeccCCCccCCCCccccccccccceeeeccccccc
Q 039533 392 LIEINLSNNNLSGTIPPQFFSLSSLSISLDWSRNKLTGSLPIEVGKLKILEFLYVYENRLEG 453 (949)
Q Consensus 392 L~~L~l~~N~l~~~~p~~~~~l~~l~~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 453 (949)
|++|+|++|++++..|..|..+++| +.|++++|++++..+..|..+++|+.|+|++|.+..
T Consensus 274 L~~L~L~~n~l~~~~~~~~~~l~~L-~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~c 334 (477)
T 2id5_A 274 LQEIQLVGGQLAVVEPYAFRGLNYL-RVLNVSGNQLTTLEESVFHSVGNLETLILDSNPLAC 334 (477)
T ss_dssp CCEEECCSSCCSEECTTTBTTCTTC-CEEECCSSCCSCCCGGGBSCGGGCCEEECCSSCEEC
T ss_pred CCEEECCCCccceECHHHhcCcccC-CEEECCCCcCceeCHhHcCCCcccCEEEccCCCccC
Confidence 6666666666665556666666666 556666666665555566666777777777777663
No 215
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00 E-value=3.4e-38 Score=349.98 Aligned_cols=247 Identities=26% Similarity=0.341 Sum_probs=196.5
Q ss_pred cCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCCc---chHHHHHHHHHHHhcCCCcceeEEeeeecccccCCcc
Q 039533 626 SGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHG---ASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDF 702 (949)
Q Consensus 626 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 702 (949)
+.|...+.||+|+||.||+|++..+++.||||++...... ..+.+.+|++++++++||||+++++++...+ .
T Consensus 54 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~-----~ 128 (348)
T 1u5q_A 54 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREH-----T 128 (348)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETT-----E
T ss_pred hheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECC-----e
Confidence 4588889999999999999999889999999999754322 2357889999999999999999999986544 7
Q ss_pred ceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEE
Q 039533 703 KASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARV 782 (949)
Q Consensus 703 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl 782 (949)
.++||||++ |++.+++.. ....+++.++..++.|++.||+|||++ +|+||||||+||+++.++.+||
T Consensus 129 ~~lv~e~~~-g~l~~~l~~---------~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL 195 (348)
T 1u5q_A 129 AWLVMEYCL-GSASDLLEV---------HKKPLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKL 195 (348)
T ss_dssp EEEEEECCS-EEHHHHHHH---------HTSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTEEEE
T ss_pred EEEEEecCC-CCHHHHHHH---------hcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEE
Confidence 899999997 688887751 235689999999999999999999988 8999999999999999999999
Q ss_pred eecccceecCCCCCccccccccCccCccCccccC---CCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhccc
Q 039533 783 GDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGV---GCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRK 859 (949)
Q Consensus 783 ~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~ 859 (949)
+|||+++...... ...||+.|+|||++. +..++.++|||||||++|||++|+.||........ .......
T Consensus 196 ~DfG~a~~~~~~~------~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~-~~~~~~~ 268 (348)
T 1u5q_A 196 GDFGSASIMAPAN------SFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSA-LYHIAQN 268 (348)
T ss_dssp CCCTTCBSSSSBC------CCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHH-HHHHHHS
T ss_pred eeccCceecCCCC------cccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHH-HHHHHhc
Confidence 9999998754322 345999999999874 56789999999999999999999999864321110 0000000
Q ss_pred cCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHH
Q 039533 860 ALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHE 927 (949)
Q Consensus 860 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 927 (949)
. .+.... ...+..+.+++.+||+.||++|||++|+++.
T Consensus 269 ~---------~~~~~~---------------------~~~~~~l~~li~~~l~~dP~~Rps~~~ll~h 306 (348)
T 1u5q_A 269 E---------SPALQS---------------------GHWSEYFRNFVDSCLQKIPQDRPTSEVLLKH 306 (348)
T ss_dssp C---------CCCCCC---------------------TTSCHHHHHHHHHHTCSSGGGSCCHHHHTTC
T ss_pred C---------CCCCCC---------------------CCCCHHHHHHHHHHcccChhhCcCHHHHhhC
Confidence 0 000000 0123457889999999999999999999753
No 216
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00 E-value=1.7e-37 Score=348.42 Aligned_cols=280 Identities=18% Similarity=0.162 Sum_probs=195.7
Q ss_pred hcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCC--cchHHHHHHHHHHHhcCCCcceeEEeeeeccc-ccCCc
Q 039533 625 TSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHH--GASRSFIAECKALKSIRHRNLVKVLTACLGAD-YRGND 701 (949)
Q Consensus 625 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~-~~~~~ 701 (949)
.++|++.+.||+|+||.||+|.+..+++.||||++..... ...+.+.+|+.++++++||||+++++++...+ .....
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~ 103 (371)
T 2xrw_A 24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQ 103 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCC
T ss_pred hhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeecccccccccc
Confidence 3679999999999999999999998999999999975432 33467889999999999999999999986543 12334
Q ss_pred cceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceE
Q 039533 702 FKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTAR 781 (949)
Q Consensus 702 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~k 781 (949)
..++||||+++ +|.+++. ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+|
T Consensus 104 ~~~lv~e~~~~-~l~~~~~------------~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIl~~~~~~~k 167 (371)
T 2xrw_A 104 DVYIVMELMDA-NLCQVIQ------------MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLK 167 (371)
T ss_dssp EEEEEEECCSE-EHHHHHH------------SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEE
T ss_pred ceEEEEEcCCC-CHHHHHh------------hccCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEE
Confidence 67999999975 7888775 2378899999999999999999988 999999999999999999999
Q ss_pred EeecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhcccc-
Q 039533 782 VGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKA- 860 (949)
Q Consensus 782 l~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~- 860 (949)
|+|||+++........ ....||+.|+|||++.+..++.++|||||||++|||++|+.||......+ .+.......
T Consensus 168 l~Dfg~a~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~-~~~~i~~~~~ 243 (371)
T 2xrw_A 168 ILDFGLARTAGTSFMM---TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHID-QWNKVIEQLG 243 (371)
T ss_dssp ECCCCC-------------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHC-CC
T ss_pred EEEeeccccccccccc---CCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHhC
Confidence 9999999876543221 23458999999999999899999999999999999999999996432211 000000000
Q ss_pred ---------CCCchhhhcccC--CCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 039533 861 ---------LPDDVMDIVDSS--LLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVH 926 (949)
Q Consensus 861 ---------~~~~~~~~~d~~--l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 926 (949)
........+... ......+.... ..............+..+.+++.+|++.||++|||++|+++
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~ 318 (371)
T 2xrw_A 244 TPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFP--DVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQ 318 (371)
T ss_dssp CCCHHHHTTSCHHHHHHHHSSCCCCCCCHHHHSC--GGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred CCCHHHHHHhhhHHHHHHhhCccccccchhhhcc--cccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhC
Confidence 000000000000 00000000000 00000001112344677899999999999999999999986
No 217
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00 E-value=1.3e-37 Score=338.05 Aligned_cols=253 Identities=23% Similarity=0.289 Sum_probs=196.5
Q ss_pred CCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCCcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCccceeE
Q 039533 627 GFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFKASV 706 (949)
Q Consensus 627 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv 706 (949)
+|.....||+|+||.||+|++..+++.||||++........+.+.+|+.++++++||||+++++++...+ ..++|
T Consensus 23 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~-----~~~lv 97 (295)
T 2clq_A 23 ENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENG-----FIKIF 97 (295)
T ss_dssp TTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETT-----EEEEE
T ss_pred CCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCC-----cEEEE
Confidence 3555569999999999999999899999999998766666678999999999999999999999986544 78999
Q ss_pred eeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecC-CCceEEeec
Q 039533 707 YEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDD-YMTARVGDF 785 (949)
Q Consensus 707 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~-~~~~kl~Df 785 (949)
|||+++++|.+++.... ....+++..+..++.|++.||+|||++ +|+||||||+||+++. ++.+||+||
T Consensus 98 ~e~~~~~~L~~~l~~~~-------~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~kl~Df 167 (295)
T 2clq_A 98 MEQVPGGSLSALLRSKW-------GPLKDNEQTIGFYTKQILEGLKYLHDN---QIVHRDIKGDNVLINTYSGVLKISDF 167 (295)
T ss_dssp EECCSEEEHHHHHHHTT-------CCCTTCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTCCEEECCT
T ss_pred EEeCCCCCHHHHHHhhc-------cCCCccHHHHHHHHHHHHHHHHHHHhC---CEEccCCChhhEEEECCCCCEEEeec
Confidence 99999999999996321 123467889999999999999999987 9999999999999987 899999999
Q ss_pred ccceecCCCCCccccccccCccCccCccccCCCc--cCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhccccCCC
Q 039533 786 GLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCE--VSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKALPD 863 (949)
Q Consensus 786 G~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~ 863 (949)
|.++......... ....||+.|+|||++.+.. ++.++||||||+++|||++|+.||................
T Consensus 168 g~~~~~~~~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~---- 241 (295)
T 2clq_A 168 GTSKRLAGINPCT--ETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMF---- 241 (295)
T ss_dssp TTCEESCC-------CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHHHHHHHHH----
T ss_pred ccccccCCCCCcc--cccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHHHHhhccc----
Confidence 9998765432211 2345899999999987643 7899999999999999999999996432111100000000
Q ss_pred chhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 039533 864 DVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVH 926 (949)
Q Consensus 864 ~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 926 (949)
...+.+. ...+..+.+++.+|++.||++|||+.|+++
T Consensus 242 ----~~~~~~~----------------------~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 278 (295)
T 2clq_A 242 ----KVHPEIP----------------------ESMSAEAKAFILKCFEPDPDKRACANDLLV 278 (295)
T ss_dssp ----CCCCCCC----------------------TTSCHHHHHHHHHTTCSSTTTSCCHHHHHT
T ss_pred ----ccccccc----------------------ccCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 0000000 123456789999999999999999999975
No 218
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00 E-value=1.8e-37 Score=356.94 Aligned_cols=268 Identities=19% Similarity=0.246 Sum_probs=206.9
Q ss_pred hcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCCcchHHHHHHHHHHHhcCCC-cceeEEeeeecccccCCccc
Q 039533 625 TSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHGASRSFIAECKALKSIRHR-NLVKVLTACLGADYRGNDFK 703 (949)
Q Consensus 625 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~-niv~~~~~~~~~~~~~~~~~ 703 (949)
.++|.+.++||+|+||.||+|++..+++.||||++..... ..++.+|+++++.++|+ ++..+..++.. .+..
T Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~--~~~~~~E~~il~~L~~~~~i~~i~~~~~~-----~~~~ 78 (483)
T 3sv0_A 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK--HPQLLYESKIYRILQGGTGIPNVRWFGVE-----GDYN 78 (483)
T ss_dssp TTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCS--SCCHHHHHHHHHHTTTSTTCCCEEEEEEE-----TTEE
T ss_pred CCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEeccccc--cHHHHHHHHHHHHhcCCCCCCeEEEEEee-----CCEE
Confidence 4689999999999999999999988999999999875433 34588999999999875 45455444332 3377
Q ss_pred eeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeee---cCCCce
Q 039533 704 ASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLL---DDYMTA 780 (949)
Q Consensus 704 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll---~~~~~~ 780 (949)
++||||+ +++|.+++.. ....+++.+++.|+.||+.||+|||++ +|+||||||+|||+ +.++.+
T Consensus 79 ~lvme~~-g~sL~~ll~~---------~~~~l~~~~~~~i~~qi~~aL~yLH~~---gIvHrDIKP~NILl~~~~~~~~v 145 (483)
T 3sv0_A 79 VLVMDLL-GPSLEDLFNF---------CSRKLSLKTVLMLADQMINRVEFVHSK---SFLHRDIKPDNFLMGLGRRANQV 145 (483)
T ss_dssp EEEEECC-CCBHHHHHHH---------TTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTTCE
T ss_pred EEEEECC-CCCHHHHHHh---------hcCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccCcceEEEecCCCCCeE
Confidence 9999999 9999999962 234689999999999999999999987 99999999999999 688999
Q ss_pred EEeecccceecCCCCCcc-----ccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhh
Q 039533 781 RVGDFGLARILSPDHTQT-----SSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHN 855 (949)
Q Consensus 781 kl~DfG~a~~~~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~ 855 (949)
||+|||+++.+....... ......||..|+|||++.+..++.++|||||||++|||++|+.||..........
T Consensus 146 kL~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~-- 223 (483)
T 3sv0_A 146 YIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQ-- 223 (483)
T ss_dssp EECCCTTCEECBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHH--
T ss_pred EEEeCCcceeccCCccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHH--
Confidence 999999998876543311 1124569999999999999999999999999999999999999997432211000
Q ss_pred hccccCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHHhHHhh
Q 039533 856 FGRKALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHELQSIKNIL 935 (949)
Q Consensus 856 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~~~~ 935 (949)
. ...+.+..... ........++.++.+++..||+.+|++||++.+|++.|+++....
T Consensus 224 ~--------~~~i~~~~~~~---------------~~~~l~~~~p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l~~~~ 280 (483)
T 3sv0_A 224 K--------YEKISEKKVAT---------------SIEALCRGYPTEFASYFHYCRSLRFDDKPDYSYLKRLFRDLFIRE 280 (483)
T ss_dssp H--------HHHHHHHHHHS---------------CHHHHHTTSCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHT
T ss_pred H--------HHHHhhccccc---------------cHHHHhcCCcHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHHc
Confidence 0 00000000000 000011234567899999999999999999999999999997765
Q ss_pred cc
Q 039533 936 LG 937 (949)
Q Consensus 936 ~~ 937 (949)
..
T Consensus 281 ~~ 282 (483)
T 3sv0_A 281 GF 282 (483)
T ss_dssp TC
T ss_pred CC
Confidence 43
No 219
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00 E-value=4.9e-38 Score=347.74 Aligned_cols=250 Identities=21% Similarity=0.263 Sum_probs=203.0
Q ss_pred hcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCC---CcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCc
Q 039533 625 TSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQH---HGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGND 701 (949)
Q Consensus 625 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 701 (949)
.++|.+.+.||+|+||.||+|++..+++.||+|++.... ....+.+.+|+.++++++||||+++++++...+
T Consensus 40 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~----- 114 (335)
T 2owb_A 40 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDND----- 114 (335)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSS-----
T ss_pred CCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCC-----
Confidence 357888999999999999999999899999999997542 233467889999999999999999999976544
Q ss_pred cceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceE
Q 039533 702 FKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTAR 781 (949)
Q Consensus 702 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~k 781 (949)
..++||||+++++|.+++. ....+++.++..++.|++.||+|||++ +|+||||||+||+++.++.+|
T Consensus 115 ~~~lv~e~~~~~~L~~~~~----------~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~~~~~k 181 (335)
T 2owb_A 115 FVFVVLELCRRRSLLELHK----------RRKALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVK 181 (335)
T ss_dssp EEEEEECCCTTCBHHHHHH----------HHCSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEE
T ss_pred eEEEEEecCCCCCHHHHHh----------ccCCCCHHHHHHHHHHHHHHHHHHHHC---CCEecCCCchhEEEcCCCCEE
Confidence 7899999999999999886 235689999999999999999999987 999999999999999999999
Q ss_pred EeecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhccccC
Q 039533 782 VGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKAL 861 (949)
Q Consensus 782 l~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~ 861 (949)
|+|||+++......... ....||..|+|||++.+..++.++||||||+++|||++|+.||......+. ..
T Consensus 182 l~Dfg~~~~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~-~~------- 251 (335)
T 2owb_A 182 IGDFGLATKVEYDGERK--KVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKET-YL------- 251 (335)
T ss_dssp ECCCTTCEECCSTTCCB--CCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHH-HH-------
T ss_pred EeeccCceecccCcccc--cccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHHHH-HH-------
Confidence 99999998765433222 234589999999999998899999999999999999999999964321110 00
Q ss_pred CCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHH
Q 039533 862 PDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHE 927 (949)
Q Consensus 862 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 927 (949)
.+...... .+ ......+.+++.+|++.||++|||++|+++.
T Consensus 252 -----~~~~~~~~-~~-------------------~~~~~~~~~li~~~l~~dp~~Rps~~ell~~ 292 (335)
T 2owb_A 252 -----RIKKNEYS-IP-------------------KHINPVAASLIQKMLQTDPTARPTINELLND 292 (335)
T ss_dssp -----HHHHTCCC-CC-------------------TTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred -----HHhcCCCC-CC-------------------ccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 00000000 00 0123457889999999999999999999873
No 220
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00 E-value=8.2e-38 Score=337.69 Aligned_cols=247 Identities=21% Similarity=0.283 Sum_probs=201.7
Q ss_pred hcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCC---CcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCc
Q 039533 625 TSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQH---HGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGND 701 (949)
Q Consensus 625 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 701 (949)
.++|.+.+.||+|+||.||+|++..+++.||+|++.... ....+.+.+|++++++++||||+++++++...+
T Consensus 13 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~----- 87 (284)
T 2vgo_A 13 IDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRK----- 87 (284)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSS-----
T ss_pred hhhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCC-----
Confidence 367899999999999999999999899999999996432 233467899999999999999999999976544
Q ss_pred cceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceE
Q 039533 702 FKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTAR 781 (949)
Q Consensus 702 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~k 781 (949)
..++||||+++++|.+++. ....+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+|
T Consensus 88 ~~~lv~e~~~~~~L~~~l~----------~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~k 154 (284)
T 2vgo_A 88 RIYLMLEFAPRGELYKELQ----------KHGRFDEQRSATFMEELADALHYCHER---KVIHRDIKPENLLMGYKGELK 154 (284)
T ss_dssp EEEEEECCCTTEEHHHHHH----------HHSSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTCCEE
T ss_pred EEEEEEEeCCCCcHHHHHH----------hcCCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEEcCCCCEE
Confidence 7899999999999999986 234589999999999999999999977 999999999999999999999
Q ss_pred EeecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhccccC
Q 039533 782 VGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKAL 861 (949)
Q Consensus 782 l~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~ 861 (949)
|+|||.+........ ....|++.|+|||++.+..++.++||||||+++|||++|+.||+....... .
T Consensus 155 l~Dfg~~~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~-~-------- 221 (284)
T 2vgo_A 155 IADFGWSVHAPSLRR----RTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTET-H-------- 221 (284)
T ss_dssp ECCCTTCEECSSSCB----CCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHH-H--------
T ss_pred EecccccccCccccc----ccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHhHH-H--------
Confidence 999999976543322 234589999999999998999999999999999999999999964321110 0
Q ss_pred CCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 039533 862 PDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVH 926 (949)
Q Consensus 862 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 926 (949)
..+...... .+ ...+..+.+++.+|++.||++|||++|+++
T Consensus 222 ----~~~~~~~~~-~~-------------------~~~~~~~~~li~~~l~~~p~~Rps~~~ll~ 262 (284)
T 2vgo_A 222 ----RRIVNVDLK-FP-------------------PFLSDGSKDLISKLLRYHPPQRLPLKGVME 262 (284)
T ss_dssp ----HHHHTTCCC-CC-------------------TTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred ----HHHhccccC-CC-------------------CcCCHHHHHHHHHHhhcCHhhCCCHHHHhh
Confidence 001000000 00 012345789999999999999999999986
No 221
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00 E-value=9.1e-38 Score=362.48 Aligned_cols=252 Identities=23% Similarity=0.270 Sum_probs=200.7
Q ss_pred hcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCC---CcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCc
Q 039533 625 TSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQH---HGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGND 701 (949)
Q Consensus 625 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 701 (949)
.++|.+.++||+|+||.||+|++..+++.||+|++.... ......+.+|+.++++++||||+++++++...+
T Consensus 184 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~----- 258 (543)
T 3c4z_A 184 EDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKT----- 258 (543)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSS-----
T ss_pred hhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCC-----
Confidence 367888999999999999999999899999999997432 233467889999999999999999999976544
Q ss_pred cceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceE
Q 039533 702 FKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTAR 781 (949)
Q Consensus 702 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~k 781 (949)
..++||||+++|+|.+++.... .....+++..++.++.||+.||+|||++ +|+||||||+||+++.++++|
T Consensus 259 ~l~lVmE~~~gg~L~~~l~~~~------~~~~~l~e~~~~~~~~qi~~aL~~LH~~---gIvHrDLKP~NILl~~~g~vk 329 (543)
T 3c4z_A 259 DLCLVMTIMNGGDIRYHIYNVD------EDNPGFQEPRAIFYTAQIVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVR 329 (543)
T ss_dssp EEEEEECCCTTCBHHHHHHTSS------TTSCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEE
T ss_pred EEEEEEEeccCCCHHHHHHHhh------cccccccHHHHHHHHHHHHHHHHHHHHc---CCcccCCChHHEEEeCCCCEE
Confidence 7899999999999999986321 1234689999999999999999999987 999999999999999999999
Q ss_pred EeecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhccccC
Q 039533 782 VGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKAL 861 (949)
Q Consensus 782 l~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~ 861 (949)
|+|||+++......... ....||+.|+|||++.+..++.++|||||||++|||++|+.||........ .....
T Consensus 330 L~DFGla~~~~~~~~~~--~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~~-~~~~~---- 402 (543)
T 3c4z_A 330 ISDLGLAVELKAGQTKT--KGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVE-NKELK---- 402 (543)
T ss_dssp ECCCTTCEECCTTCCCB--CCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCC-HHHHH----
T ss_pred EeecceeeeccCCCccc--ccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccchh-HHHHH----
Confidence 99999999876544322 234699999999999999999999999999999999999999964321110 00000
Q ss_pred CCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCH
Q 039533 862 PDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNM 921 (949)
Q Consensus 862 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~ 921 (949)
..+...... .+ ...+..+.+++.+|++.||++||++
T Consensus 403 ----~~i~~~~~~-~p-------------------~~~s~~~~~li~~lL~~dP~~R~~~ 438 (543)
T 3c4z_A 403 ----QRVLEQAVT-YP-------------------DKFSPASKDFCEALLQKDPEKRLGF 438 (543)
T ss_dssp ----HHHHHCCCC-CC-------------------TTSCHHHHHHHHHHSCSSGGGSCCC
T ss_pred ----HHHhhcccC-CC-------------------cccCHHHHHHHHHhccCCHhHCCCC
Confidence 001111000 00 1234567889999999999999975
No 222
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00 E-value=1.1e-37 Score=340.12 Aligned_cols=250 Identities=24% Similarity=0.334 Sum_probs=203.9
Q ss_pred hcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCC-CcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCccc
Q 039533 625 TSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQH-HGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFK 703 (949)
Q Consensus 625 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 703 (949)
.+.|.+.+.||+|+||.||+|++..+++.||||++.... ....+.+.+|+.++++++||||+++++++.... ..
T Consensus 21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-----~~ 95 (303)
T 3a7i_A 21 EELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDT-----KL 95 (303)
T ss_dssp GGTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETT-----EE
T ss_pred HHHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC-----eE
Confidence 356888999999999999999998889999999997554 334578999999999999999999999976544 78
Q ss_pred eeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEe
Q 039533 704 ASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVG 783 (949)
Q Consensus 704 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~ 783 (949)
++||||+++++|.+++. ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+
T Consensus 96 ~lv~e~~~~~~L~~~~~-----------~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~ 161 (303)
T 3a7i_A 96 WIIMEYLGGGSALDLLE-----------PGPLDETQIATILREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLA 161 (303)
T ss_dssp EEEEECCTTEEHHHHHT-----------TSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEEC
T ss_pred EEEEEeCCCCcHHHHHh-----------cCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChheEEECCCCCEEEe
Confidence 99999999999999986 24589999999999999999999987 99999999999999999999999
Q ss_pred ecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhccccCCC
Q 039533 784 DFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKALPD 863 (949)
Q Consensus 784 DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~ 863 (949)
|||.+.......... ....||+.|+|||++.+..++.++||||||+++|||++|+.||....... .........
T Consensus 162 Dfg~~~~~~~~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~--~~~~~~~~~-- 235 (303)
T 3a7i_A 162 DFGVAGQLTDTQIKR--NTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMK--VLFLIPKNN-- 235 (303)
T ss_dssp CCTTCEECBTTBCCB--CCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH--HHHHHHHSC--
T ss_pred ecccceecCcccccc--CccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHHH--HHHHhhcCC--
Confidence 999998765433221 23568999999999999999999999999999999999999996432111 000000000
Q ss_pred chhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHH
Q 039533 864 DVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHE 927 (949)
Q Consensus 864 ~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 927 (949)
.+... ...+..+.+++.+|++.||++|||+.|+++.
T Consensus 236 ------~~~~~----------------------~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~ 271 (303)
T 3a7i_A 236 ------PPTLE----------------------GNYSKPLKEFVEACLNKEPSFRPTAKELLKH 271 (303)
T ss_dssp ------CCCCC----------------------SSCCHHHHHHHHHHCCSSGGGSCCHHHHTTC
T ss_pred ------CCCCc----------------------cccCHHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence 00000 0223457899999999999999999999874
No 223
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00 E-value=7.7e-38 Score=344.93 Aligned_cols=257 Identities=18% Similarity=0.213 Sum_probs=199.6
Q ss_pred HHHhcCCCCC-CeeeeecCceEEEEEEcCCCEEEEEEEEecCCC--cchHHHHHHHHHHHhc-CCCcceeEEeeeecccc
Q 039533 622 YNATSGFSSA-NLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHH--GASRSFIAECKALKSI-RHRNLVKVLTACLGADY 697 (949)
Q Consensus 622 ~~~~~~y~~~-~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~ 697 (949)
+.-.++|.+. +.||+|+||.||+|++..+++.||+|+++.... .....+.+|+.+++++ .||||+++++++...+
T Consensus 24 ~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~~- 102 (327)
T 3lm5_A 24 ENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENTS- 102 (327)
T ss_dssp HHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEECSS-
T ss_pred HhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEeCC-
Confidence 3445567776 889999999999999998999999999975432 3356889999999999 4699999999976544
Q ss_pred cCCccceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecC-
Q 039533 698 RGNDFKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDD- 776 (949)
Q Consensus 698 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~- 776 (949)
..++||||+++|+|.+++... ....+++.+++.++.|++.||+|||++ +|+||||||+||+++.
T Consensus 103 ----~~~lv~e~~~~~~L~~~~~~~--------~~~~~~~~~~~~i~~ql~~~L~~LH~~---givH~Dikp~NIl~~~~ 167 (327)
T 3lm5_A 103 ----EIILILEYAAGGEIFSLCLPE--------LAEMVSENDVIRLIKQILEGVYYLHQN---NIVHLDLKPQNILLSSI 167 (327)
T ss_dssp ----EEEEEEECCTTEEGGGGGSSC--------C-CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESCB
T ss_pred ----eEEEEEEecCCCcHHHHHHHh--------cccCCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCChHHEEEecC
Confidence 789999999999999998621 235689999999999999999999988 9999999999999987
Q ss_pred --CCceEEeecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccccccCchhh
Q 039533 777 --YMTARVGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLH 854 (949)
Q Consensus 777 --~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~ 854 (949)
++.+||+|||+++......... ...||+.|+|||++.+..++.++|||||||++|||++|+.||........ ..
T Consensus 168 ~~~~~~kL~Dfg~a~~~~~~~~~~---~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~-~~ 243 (327)
T 3lm5_A 168 YPLGDIKIVDFGMSRKIGHACELR---EIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQET-YL 243 (327)
T ss_dssp TTBCCEEECCGGGCEEC------------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH-HH
T ss_pred CCCCcEEEeeCccccccCCccccc---cccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHH-HH
Confidence 7899999999998775443222 34699999999999999999999999999999999999999964321110 00
Q ss_pred hhccccCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 039533 855 NFGRKALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVH 926 (949)
Q Consensus 855 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 926 (949)
. +....... +. +.....+..+.+++.+|++.||++|||++|+++
T Consensus 244 ~------------i~~~~~~~-~~---------------~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~ 287 (327)
T 3lm5_A 244 N------------ISQVNVDY-SE---------------ETFSSVSQLATDFIQSLLVKNPEKRPTAEICLS 287 (327)
T ss_dssp H------------HHHTCCCC-CT---------------TTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred H------------HHhccccc-Cc---------------hhhcccCHHHHHHHHHHcCCChhhCcCHHHHhC
Confidence 0 00000000 00 000123456789999999999999999999975
No 224
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00 E-value=9.9e-38 Score=363.34 Aligned_cols=252 Identities=23% Similarity=0.272 Sum_probs=200.2
Q ss_pred hcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecC--CCcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCcc
Q 039533 625 TSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQ--HHGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDF 702 (949)
Q Consensus 625 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 702 (949)
.++|++.++||+|+||+||+|++..+++.||||++... .......+.+|++++++++||||+++++++.... .
T Consensus 21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~-----~ 95 (486)
T 3mwu_A 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSS-----S 95 (486)
T ss_dssp HHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSS-----E
T ss_pred hcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCC-----E
Confidence 45799999999999999999999989999999999643 2234578899999999999999999999976544 7
Q ss_pred ceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeec---CCCc
Q 039533 703 KASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLD---DYMT 779 (949)
Q Consensus 703 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~---~~~~ 779 (949)
.++||||+++|+|.+++. ....+++..+..++.|++.||+|||++ +|+||||||+||+++ .++.
T Consensus 96 ~~lv~e~~~~~~L~~~~~----------~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~ 162 (486)
T 3mwu_A 96 FYIVGELYTGGELFDEII----------KRKRFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCD 162 (486)
T ss_dssp EEEEECCCCSCBHHHHHH----------HHSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEESSSSTTCC
T ss_pred EEEEEEcCCCCcHHHHHH----------hcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCC
Confidence 899999999999999886 235689999999999999999999988 999999999999995 5668
Q ss_pred eEEeecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhccc
Q 039533 780 ARVGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRK 859 (949)
Q Consensus 780 ~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~ 859 (949)
+||+|||+++........ ....||+.|+|||++.+ .++.++||||+||++|+|++|+.||......+ ..
T Consensus 163 ~kl~Dfg~a~~~~~~~~~---~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~--~~----- 231 (486)
T 3mwu_A 163 IKIIDFGLSTCFQQNTKM---KDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYD--IL----- 231 (486)
T ss_dssp EEECSCSCTTTBCCC-------CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH--HH-----
T ss_pred EEEEECCcCeECCCCCcc---CCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH--HH-----
Confidence 999999999876544322 23469999999999876 58999999999999999999999996432111 00
Q ss_pred cCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHH
Q 039533 860 ALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHE 927 (949)
Q Consensus 860 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 927 (949)
..+........ .+.....+..+.+++.+|++.||++|||+.|+++.
T Consensus 232 ------~~i~~~~~~~~----------------~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~~l~h 277 (486)
T 3mwu_A 232 ------KRVETGKYAFD----------------LPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEH 277 (486)
T ss_dssp ------HHHHHTCCCSC----------------SGGGGGSCHHHHHHHHHHTCSSTTTSCCHHHHHHC
T ss_pred ------HHHHhCCCCCC----------------CcccCCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 00000000000 00111334567899999999999999999999873
No 225
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00 E-value=2.7e-38 Score=340.53 Aligned_cols=258 Identities=22% Similarity=0.287 Sum_probs=202.1
Q ss_pred hcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCC--cchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCcc
Q 039533 625 TSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHH--GASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDF 702 (949)
Q Consensus 625 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 702 (949)
.++|++.+.||+|+||.||+|++..+++.||+|++..... ...+.+.+|+.++++++||||+++++++... ....
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~---~~~~ 81 (279)
T 2w5a_A 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDR---TNTT 81 (279)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEG---GGTE
T ss_pred hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecC---CCce
Confidence 4678999999999999999999998999999999975432 3346789999999999999999999987532 2346
Q ss_pred ceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCC-----eEecCCCCCCeeecCC
Q 039533 703 KASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPV-----TAHCDLKPSNVLLDDY 777 (949)
Q Consensus 703 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~-----ivHrDlkp~NIll~~~ 777 (949)
.++||||+++++|.+++... ......+++..++.++.|++.||+|||+. + |+||||||+||+++.+
T Consensus 82 ~~lv~e~~~~~~L~~~l~~~------~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~~~~~~ivH~dl~p~NIl~~~~ 152 (279)
T 2w5a_A 82 LYIVMEYCEGGDLASVITKG------TKERQYLDEEFVLRVMTQLTLALKECHRR---SDGGHTVLHRDLKPANVFLDGK 152 (279)
T ss_dssp EEEEEECCTTEEHHHHHHHH------HHTTCCCCHHHHHHHHHHHHHHHHHHHHH---C------CCCCCSGGGEEECSS
T ss_pred EEEEEeCCCCCCHHHHHHhh------cccCCCCCHHHHHHHHHHHHHHHHHHhcc---cCCCCeeEEeccchhhEEEcCC
Confidence 89999999999999999621 11234589999999999999999999987 6 9999999999999999
Q ss_pred CceEEeecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhc
Q 039533 778 MTARVGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFG 857 (949)
Q Consensus 778 ~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~ 857 (949)
+.+||+|||.++......... ....||..|+|||++.+..++.++||||||+++|||++|+.||...... .....
T Consensus 153 ~~~kl~dfg~~~~~~~~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~--~~~~~- 227 (279)
T 2w5a_A 153 QNVKLGDFGLARILNHDTSFA--KTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQK--ELAGK- 227 (279)
T ss_dssp SCEEECCCCHHHHC---CHHH--HHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHH-
T ss_pred CCEEEecCchheeeccccccc--cccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCHH--HHHHH-
Confidence 999999999998765443211 1345899999999999888999999999999999999999999643211 00000
Q ss_pred cccCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHH
Q 039533 858 RKALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHEL 928 (949)
Q Consensus 858 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L 928 (949)
+........+ ...+..+.+++.+||+.||++|||+.||++.+
T Consensus 228 ----------i~~~~~~~~~-------------------~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~ 269 (279)
T 2w5a_A 228 ----------IREGKFRRIP-------------------YRYSDELNEIITRMLNLKDYHRPSVEEILENP 269 (279)
T ss_dssp ----------HHHTCCCCCC-------------------TTSCHHHHHHHHHHTCSSGGGSCCHHHHHTST
T ss_pred ----------HhhcccccCC-------------------cccCHHHHHHHHHHcCCCcccCCCHHHHHhCh
Confidence 0000000000 02345688999999999999999999999865
No 226
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00 E-value=5.8e-39 Score=361.27 Aligned_cols=260 Identities=15% Similarity=0.117 Sum_probs=192.2
Q ss_pred hcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecC---CCcchHHHHHHHH---HHHhcCCCcceeEE-------ee
Q 039533 625 TSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQ---HHGASRSFIAECK---ALKSIRHRNLVKVL-------TA 691 (949)
Q Consensus 625 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~---~l~~l~h~niv~~~-------~~ 691 (949)
.++|.+.+.||+|+||.||+|++..+++.||||++... .....+.+.+|+. .+++++||||++++ ++
T Consensus 72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~ 151 (377)
T 3byv_A 72 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 151 (377)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEE
T ss_pred CceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhh
Confidence 45788899999999999999999888999999999743 3334578899994 55555899999998 44
Q ss_pred eecccc-------cCCc-----cceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCC
Q 039533 692 CLGADY-------RGND-----FKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQ 759 (949)
Q Consensus 692 ~~~~~~-------~~~~-----~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~ 759 (949)
+...+. .+.. ..++||||+ +|+|.+++.... ........+++..+..|+.|++.||+|||++
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~---~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~-- 225 (377)
T 3byv_A 152 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLL---SHSSTHKSLVHHARLQLTLQVIRLLASLHHY-- 225 (377)
T ss_dssp EECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHH---HTTTTTHHHHHHHHHHHHHHHHHHHHHHHHT--
T ss_pred hhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhcc---ccccccccccHHHHHHHHHHHHHHHHHHHhC--
Confidence 332210 0111 268999999 689999997321 1111123455688889999999999999988
Q ss_pred CCeEecCCCCCCeeecCCCceEEeecccceecCCCCCccccccccCccCccCccccCCC-----------ccCCccchHH
Q 039533 760 PVTAHCDLKPSNVLLDDYMTARVGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGC-----------EVSTNGDVYS 828 (949)
Q Consensus 760 ~~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----------~~~~~sDiwS 828 (949)
+|+||||||+|||++.++.+||+|||+|+..... .....| +.|+|||++.+. .++.++||||
T Consensus 226 -~ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~~-----~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwS 298 (377)
T 3byv_A 226 -GLVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGAR-----VVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWA 298 (377)
T ss_dssp -TEECSCCCGGGEEECTTCCEEECCGGGCEETTCE-----EECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHH
T ss_pred -CeecCCCCHHHEEEcCCCCEEEEechhheecCCc-----ccCCCC-cCccChhhhcccccccccccccccCChhhhHHH
Confidence 8999999999999999999999999999864331 123457 999999999887 7999999999
Q ss_pred HHHHHHHHHhCCCCCccccccCchhhhhccccCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhh
Q 039533 829 YGILLLELVIGKKPIDIMFEGDINLHNFGRKALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGV 908 (949)
Q Consensus 829 lGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~ 908 (949)
|||++|||++|+.||........ ...+.. .. ...+..+.+++.
T Consensus 299 lG~il~elltg~~Pf~~~~~~~~-------------~~~~~~-~~-----------------------~~~~~~~~~li~ 341 (377)
T 3byv_A 299 LGLVIYWIWCADLPITKDAALGG-------------SEWIFR-SC-----------------------KNIPQPVRALLE 341 (377)
T ss_dssp HHHHHHHHHHSSCCC------CC-------------SGGGGS-SC-----------------------CCCCHHHHHHHH
T ss_pred HHHHHHHHHHCCCCCcccccccc-------------hhhhhh-hc-----------------------cCCCHHHHHHHH
Confidence 99999999999999964321110 000000 00 022346789999
Q ss_pred ccccCCCCCCCCHHHHHH--HHHHhHHh
Q 039533 909 ACSMELPQDRTNMTNVVH--ELQSIKNI 934 (949)
Q Consensus 909 ~cl~~dP~~RPs~~ev~~--~L~~i~~~ 934 (949)
+||+.||++|||+.|+++ .++++++.
T Consensus 342 ~~L~~dp~~Rpt~~e~l~hp~f~~~~~~ 369 (377)
T 3byv_A 342 GFLRYPKEDRLLPLQAMETPEYEQLRTE 369 (377)
T ss_dssp HHTCSSGGGCCCHHHHHTSHHHHHHHHH
T ss_pred HHcCCCchhCCCHHHHhhChHHHHHHHH
Confidence 999999999999999986 55555443
No 227
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00 E-value=5.5e-38 Score=365.64 Aligned_cols=250 Identities=23% Similarity=0.301 Sum_probs=202.3
Q ss_pred cCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCC---CcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCcc
Q 039533 626 SGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQH---HGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDF 702 (949)
Q Consensus 626 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 702 (949)
++|++.+.||+|+||.||+|++..+++.||||++.... ....+.+.+|+.++++++||||+++++++.... .
T Consensus 26 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~-----~ 100 (484)
T 3nyv_A 26 DRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKG-----Y 100 (484)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSS-----E
T ss_pred CceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCC-----E
Confidence 56889999999999999999999899999999997543 234578999999999999999999999976544 7
Q ss_pred ceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeee---cCCCc
Q 039533 703 KASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLL---DDYMT 779 (949)
Q Consensus 703 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll---~~~~~ 779 (949)
.++||||+.+|+|.+++. ....+++..+..++.|++.||+|||++ +|+||||||+||++ +.++.
T Consensus 101 ~~lv~e~~~~~~L~~~~~----------~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~ 167 (484)
T 3nyv_A 101 FYLVGEVYTGGELFDEII----------SRKRFSEVDAARIIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDAN 167 (484)
T ss_dssp EEEEECCCCSCBHHHHHH----------TCSCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSTTCC
T ss_pred EEEEEecCCCCCHHHHHH----------hcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEEecCCCCCc
Confidence 899999999999999986 234689999999999999999999988 89999999999999 56789
Q ss_pred eEEeecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhccc
Q 039533 780 ARVGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRK 859 (949)
Q Consensus 780 ~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~ 859 (949)
+||+|||+++......... ...||+.|+|||++.+ .++.++||||+||++|+|++|++||....... ...
T Consensus 168 ~kl~Dfg~a~~~~~~~~~~---~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~--~~~---- 237 (484)
T 3nyv_A 168 IRIIDFGLSTHFEASKKMK---DKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANEYD--ILK---- 237 (484)
T ss_dssp EEECCTTHHHHBCCCCSHH---HHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH--HHH----
T ss_pred EEEEeeeeeEEcccccccc---cCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCCHHH--HHH----
Confidence 9999999998776554322 3459999999999876 68999999999999999999999996432111 000
Q ss_pred cCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 039533 860 ALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVH 926 (949)
Q Consensus 860 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 926 (949)
.+........ .+.....+..+.+++.+|++.||++|||+.|+++
T Consensus 238 -------~i~~~~~~~~----------------~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~ 281 (484)
T 3nyv_A 238 -------KVEKGKYTFE----------------LPQWKKVSESAKDLIRKMLTYVPSMRISARDALD 281 (484)
T ss_dssp -------HHHHCCCCCC----------------SGGGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred -------HHHcCCCCCC----------------CcccccCCHHHHHHHHHHCCCChhHCcCHHHHhh
Confidence 0000000000 0011133456789999999999999999999986
No 228
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00 E-value=1.8e-37 Score=362.76 Aligned_cols=251 Identities=23% Similarity=0.298 Sum_probs=199.3
Q ss_pred hcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCC-------------cchHHHHHHHHHHHhcCCCcceeEEee
Q 039533 625 TSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHH-------------GASRSFIAECKALKSIRHRNLVKVLTA 691 (949)
Q Consensus 625 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-------------~~~~~~~~E~~~l~~l~h~niv~~~~~ 691 (949)
.++|.+.++||+|+||+||+|++..+++.||||++..... ...+.+.+|+.++++++||||++++++
T Consensus 35 ~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~ 114 (504)
T 3q5i_A 35 GESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDV 114 (504)
T ss_dssp GGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEEE
T ss_pred ccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEEE
Confidence 5679999999999999999999998999999999974431 234678999999999999999999999
Q ss_pred eecccccCCccceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCC
Q 039533 692 CLGADYRGNDFKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSN 771 (949)
Q Consensus 692 ~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~N 771 (949)
+.... ..++||||+++|+|.+++. ....+++..+..++.|++.||+|||++ +|+||||||+|
T Consensus 115 ~~~~~-----~~~lv~e~~~gg~L~~~l~----------~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~N 176 (504)
T 3q5i_A 115 FEDKK-----YFYLVTEFYEGGELFEQII----------NRHKFDECDAANIMKQILSGICYLHKH---NIVHRDIKPEN 176 (504)
T ss_dssp EECSS-----EEEEEEECCTTCBHHHHHH----------HHSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGG
T ss_pred EEcCC-----EEEEEEecCCCCcHHHHHH----------HcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCcHHH
Confidence 76544 7899999999999999986 235689999999999999999999987 99999999999
Q ss_pred eeecCCC---ceEEeecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccccc
Q 039533 772 VLLDDYM---TARVGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFE 848 (949)
Q Consensus 772 Ill~~~~---~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~ 848 (949)
|+++.++ .+||+|||+++......... ...||+.|+|||++.+ .++.++||||+||++|+|++|+.||.....
T Consensus 177 il~~~~~~~~~~kl~Dfg~a~~~~~~~~~~---~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~ 252 (504)
T 3q5i_A 177 ILLENKNSLLNIKIVDFGLSSFFSKDYKLR---DRLGTAYYIAPEVLKK-KYNEKCDVWSCGVIMYILLCGYPPFGGQND 252 (504)
T ss_dssp EEESSTTCCSSEEECCCTTCEECCTTSCBC---CCCSCTTTCCHHHHTT-CBCTHHHHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred EEEecCCCCccEEEEECCCCEEcCCCCccc---cccCCcCCCCHHHhcc-CCCchHHHHHHHHHHHHHHhCCCCCCCCCH
Confidence 9998765 69999999998876543322 3459999999999874 689999999999999999999999964321
Q ss_pred cCchhhhhccccCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 039533 849 GDINLHNFGRKALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVH 926 (949)
Q Consensus 849 ~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 926 (949)
.. .. ..+........ .+.....+..+.+++.+|++.||++|||++|+++
T Consensus 253 ~~--~~-----------~~i~~~~~~~~----------------~~~~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~ 301 (504)
T 3q5i_A 253 QD--II-----------KKVEKGKYYFD----------------FNDWKNISDEAKELIKLMLTYDYNKRCTAEEALN 301 (504)
T ss_dssp HH--HH-----------HHHHHCCCCCC----------------HHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred HH--HH-----------HHHHcCCCCCC----------------ccccCCCCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 10 00 00111000000 0111234566889999999999999999999975
No 229
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00 E-value=2e-38 Score=350.52 Aligned_cols=272 Identities=23% Similarity=0.297 Sum_probs=198.7
Q ss_pred hcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCCc--chHHHHHHHHHHHhcCCCcceeEEeeeecccccCCcc
Q 039533 625 TSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHG--ASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDF 702 (949)
Q Consensus 625 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 702 (949)
.++|++.+.||+|+||.||+|++..+++.||||++...... ..+.+.+|+.++++++||||+++++++...+ .
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-----~ 98 (331)
T 4aaa_A 24 MEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKK-----R 98 (331)
T ss_dssp GGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETT-----E
T ss_pred hhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCC-----E
Confidence 46789999999999999999999988999999998754432 2356789999999999999999999976544 7
Q ss_pred ceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEE
Q 039533 703 KASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARV 782 (949)
Q Consensus 703 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl 782 (949)
.++||||+++++|.++.. ....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||
T Consensus 99 ~~lv~e~~~~~~l~~~~~----------~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nil~~~~~~~kl 165 (331)
T 4aaa_A 99 WYLVFEFVDHTILDDLEL----------FPNGLDYQVVQKYLFQIINGIGFCHSH---NIIHRDIKPENILVSQSGVVKL 165 (331)
T ss_dssp EEEEEECCSEEHHHHHHH----------STTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEE
T ss_pred EEEEEecCCcchHHHHHh----------hccCCCHHHHHHHHHHHHHHHHHHHHC---CEEccCcChheEEEcCCCcEEE
Confidence 899999999999998865 234589999999999999999999988 9999999999999999999999
Q ss_pred eecccceecCCCCCccccccccCccCccCccccCCC-ccCCccchHHHHHHHHHHHhCCCCCccccccCchh--hhhccc
Q 039533 783 GDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGC-EVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINL--HNFGRK 859 (949)
Q Consensus 783 ~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~--~~~~~~ 859 (949)
+|||.++......... ....||..|+|||++.+. .++.++|||||||++|||++|+.||......+... ......
T Consensus 166 ~Dfg~~~~~~~~~~~~--~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~ 243 (331)
T 4aaa_A 166 CDFGFARTLAAPGEVY--DDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGN 243 (331)
T ss_dssp CCCTTC--------------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCS
T ss_pred EeCCCceeecCCcccc--CCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCC
Confidence 9999998765433221 134589999999998875 68999999999999999999999996442221100 000000
Q ss_pred cCCCchhhhc------ccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 039533 860 ALPDDVMDIV------DSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVH 926 (949)
Q Consensus 860 ~~~~~~~~~~------d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 926 (949)
..+...+.+ .....+... ............+..+.+++.+|++.||++|||++|+++
T Consensus 244 -~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~ 306 (331)
T 4aaa_A 244 -LIPRHQELFNKNPVFAGVRLPEIK---------EREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLH 306 (331)
T ss_dssp -CCHHHHHHHHHCGGGTTCCCCCCS---------SCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred -CChhhhhHhhhccccccccCcccc---------ccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 000000000 000000000 000000011134567899999999999999999999875
No 230
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00 E-value=1.1e-37 Score=337.56 Aligned_cols=247 Identities=18% Similarity=0.217 Sum_probs=196.9
Q ss_pred hcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCC--CcchHHHHHHHHHHHhc-CCCcceeEEeeeecccccCCc
Q 039533 625 TSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQH--HGASRSFIAECKALKSI-RHRNLVKVLTACLGADYRGND 701 (949)
Q Consensus 625 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~ 701 (949)
.++|++.+.||+|+||.||+|++..+++.||+|+++... .....++.+|+..+.++ +||||+++++++...+
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~----- 84 (289)
T 1x8b_A 10 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDD----- 84 (289)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETT-----
T ss_pred cchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCC-----
Confidence 467899999999999999999999899999999997543 23456788999999999 8999999999976544
Q ss_pred cceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecC-----
Q 039533 702 FKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDD----- 776 (949)
Q Consensus 702 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~----- 776 (949)
..++||||+++++|.+++... ......+++.++..++.|++.||+|||++ +|+||||||+||+++.
T Consensus 85 ~~~lv~e~~~~~~L~~~l~~~------~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~~ 155 (289)
T 1x8b_A 85 HMLIQNEYCNGGSLADAISEN------YRIMSYFKEAELKDLLLQVGRGLRYIHSM---SLVHMDIKPSNIFISRTSIPN 155 (289)
T ss_dssp EEEEEEECCTTCBHHHHHHHH------HHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEC------
T ss_pred eEEEEEEecCCCcHHHHHHhh------cccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeecCCCHHHEEEcCCCCCc
Confidence 789999999999999999621 11125589999999999999999999988 9999999999999984
Q ss_pred --------------CCceEEeecccceecCCCCCccccccccCccCccCccccCCC-ccCCccchHHHHHHHHHHHhCCC
Q 039533 777 --------------YMTARVGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGC-EVSTNGDVYSYGILLLELVIGKK 841 (949)
Q Consensus 777 --------------~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDiwSlGvvl~elltg~~ 841 (949)
...+||+|||.+........ ..||+.|+|||++.+. .++.++|||||||++|||++|.+
T Consensus 156 ~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~~------~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~ 229 (289)
T 1x8b_A 156 AASEEGDEDDWASNKVMFKIGDLGHVTRISSPQV------EEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEP 229 (289)
T ss_dssp --------------CCCEEECCCTTCEETTCSCC------CCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCC
T ss_pred ccccccccccccCCceEEEEcccccccccCCccc------cCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCC
Confidence 44799999999987654332 3489999999998876 56689999999999999999998
Q ss_pred CCccccccCchhhhhccccCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCH
Q 039533 842 PIDIMFEGDINLHNFGRKALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNM 921 (949)
Q Consensus 842 Pf~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~ 921 (949)
|+.... .... +........+ ...+..+.+++.+|++.||++|||+
T Consensus 230 ~~~~~~----~~~~------------~~~~~~~~~~-------------------~~~~~~~~~li~~~l~~dp~~Rps~ 274 (289)
T 1x8b_A 230 LPRNGD----QWHE------------IRQGRLPRIP-------------------QVLSQEFTELLKVMIHPDPERRPSA 274 (289)
T ss_dssp CCSSSH----HHHH------------HHTTCCCCCS-------------------SCCCHHHHHHHHHHTCSSGGGSCCH
T ss_pred CCcchh----HHHH------------HHcCCCCCCC-------------------cccCHHHHHHHHHHhCCCcccCCCH
Confidence 764211 1110 1111110000 0223467899999999999999999
Q ss_pred HHHHH
Q 039533 922 TNVVH 926 (949)
Q Consensus 922 ~ev~~ 926 (949)
.|+++
T Consensus 275 ~~ll~ 279 (289)
T 1x8b_A 275 MALVK 279 (289)
T ss_dssp HHHHT
T ss_pred HHHhh
Confidence 99975
No 231
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00 E-value=9.9e-38 Score=335.59 Aligned_cols=249 Identities=25% Similarity=0.343 Sum_probs=193.9
Q ss_pred hcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCC---CcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCc
Q 039533 625 TSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQH---HGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGND 701 (949)
Q Consensus 625 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 701 (949)
.++|.+.+.||+|+||.||+|++..+++.||||++.... ....+.+.+|+.++++++||||+++++++...+
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~----- 84 (276)
T 2h6d_A 10 IGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPT----- 84 (276)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSS-----
T ss_pred eccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCC-----
Confidence 467999999999999999999999889999999997432 233467899999999999999999999976544
Q ss_pred cceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceE
Q 039533 702 FKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTAR 781 (949)
Q Consensus 702 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~k 781 (949)
..++||||+++++|.+++. ....+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+|
T Consensus 85 ~~~lv~e~~~~~~L~~~l~----------~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~ 151 (276)
T 2h6d_A 85 DFFMVMEYVSGGELFDYIC----------KHGRVEEMEARRLFQQILSAVDYCHRH---MVVHRDLKPENVLLDAHMNAK 151 (276)
T ss_dssp EEEEEEECCCSCBHHHHHH----------HHCSCCHHHHHHHHHHHHHHHHHHHHH---CSSCCCCCGGGEEECTTSCEE
T ss_pred eEEEEEeccCCCcHHHHHh----------ccCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChhhEEECCCCCEE
Confidence 7899999999999999996 234589999999999999999999988 899999999999999999999
Q ss_pred EeecccceecCCCCCccccccccCccCccCccccCCCcc-CCccchHHHHHHHHHHHhCCCCCccccccCchhhhhcccc
Q 039533 782 VGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEV-STNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKA 860 (949)
Q Consensus 782 l~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~ 860 (949)
|+|||.+.......... ...|++.|+|||++.+..+ +.++||||||+++|||++|+.||+..... ...
T Consensus 152 l~dfg~~~~~~~~~~~~---~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~--~~~------ 220 (276)
T 2h6d_A 152 IADFGLSNMMSDGEFLR---TSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVP--TLF------ 220 (276)
T ss_dssp ECCCCGGGCCCC----------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHH------
T ss_pred EeecccccccCCCccee---cccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcHH--HHH------
Confidence 99999998765433211 3458999999999988765 68999999999999999999999642111 000
Q ss_pred CCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHH
Q 039533 861 LPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHE 927 (949)
Q Consensus 861 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 927 (949)
+.+.......+ ...+..+.+++.+|++.||++|||++|+++.
T Consensus 221 ------~~~~~~~~~~~-------------------~~~~~~l~~li~~~l~~~p~~Rps~~~~l~h 262 (276)
T 2h6d_A 221 ------KKIRGGVFYIP-------------------EYLNRSVATLLMHMLQVDPLKRATIKDIREH 262 (276)
T ss_dssp ------HHHHHCCCCCC-------------------TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred ------HHhhcCcccCc-------------------hhcCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 00000000000 0123457889999999999999999999873
No 232
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00 E-value=1.2e-37 Score=363.24 Aligned_cols=251 Identities=20% Similarity=0.246 Sum_probs=196.1
Q ss_pred hcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCC--CcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCcc
Q 039533 625 TSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQH--HGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDF 702 (949)
Q Consensus 625 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 702 (949)
.++|++.+.||+|+||+||+|++..+++.||+|+++... ......+.+|+.++++++||||+++++++.... .
T Consensus 36 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~-----~ 110 (494)
T 3lij_A 36 SEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKR-----N 110 (494)
T ss_dssp HHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSS-----E
T ss_pred hcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCC-----E
Confidence 346889999999999999999999899999999997543 233578899999999999999999999976544 7
Q ss_pred ceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecC---CCc
Q 039533 703 KASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDD---YMT 779 (949)
Q Consensus 703 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~---~~~ 779 (949)
.++||||+++|+|.+++. ....+++..+..++.|++.||+|||++ +|+||||||+||+++. ++.
T Consensus 111 ~~lv~e~~~~g~L~~~~~----------~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~ 177 (494)
T 3lij_A 111 YYLVMECYKGGELFDEII----------HRMKFNEVDAAVIIKQVLSGVTYLHKH---NIVHRDLKPENLLLESKEKDAL 177 (494)
T ss_dssp EEEEEECCCSCBHHHHHH----------HHSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCC
T ss_pred EEEEEecCCCCcHHHHHH----------HcCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChhhEEEeCCCCCCc
Confidence 899999999999999886 235689999999999999999999987 9999999999999975 455
Q ss_pred eEEeecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhccc
Q 039533 780 ARVGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRK 859 (949)
Q Consensus 780 ~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~ 859 (949)
+||+|||+|+........ ....||+.|+|||++. ..++.++||||+||++|+|++|+.||....... ...
T Consensus 178 ~kl~DfG~a~~~~~~~~~---~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~--~~~---- 247 (494)
T 3lij_A 178 IKIVDFGLSAVFENQKKM---KERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQTDQE--ILR---- 247 (494)
T ss_dssp EEECCCTTCEECBTTBCB---CCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH--HHH----
T ss_pred EEEEECCCCeECCCCccc---cccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCCHHH--HHH----
Confidence 999999999876544322 2356999999999986 468999999999999999999999996432111 000
Q ss_pred cCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 039533 860 ALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVH 926 (949)
Q Consensus 860 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 926 (949)
.+......... +.....+..+.+++.+|++.||++|||+.|+++
T Consensus 248 -------~i~~~~~~~~~----------------~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~ 291 (494)
T 3lij_A 248 -------KVEKGKYTFDS----------------PEWKNVSEGAKDLIKQMLQFDSQRRISAQQALE 291 (494)
T ss_dssp -------HHHHTCCCCCS----------------GGGTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred -------HHHhCCCCCCc----------------hhcccCCHHHHHHHHHHCCCChhhCccHHHHhc
Confidence 00000000000 001123456789999999999999999999985
No 233
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.2e-37 Score=346.23 Aligned_cols=275 Identities=21% Similarity=0.250 Sum_probs=195.9
Q ss_pred HHHhcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCCc-----chHHHHHHHHHHHhcCCCcceeEEeeeeccc
Q 039533 622 YNATSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHG-----ASRSFIAECKALKSIRHRNLVKVLTACLGAD 696 (949)
Q Consensus 622 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~-----~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 696 (949)
....++|.+.+.||+|+||.||+|++..+++.||||+++..... ..+.+.+|++++++++||||+++++++...+
T Consensus 6 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 85 (346)
T 1ua2_A 6 KSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKS 85 (346)
T ss_dssp -------CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTT
T ss_pred HHHhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCC
Confidence 34567899999999999999999999888999999998743221 2357889999999999999999999975443
Q ss_pred ccCCccceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecC
Q 039533 697 YRGNDFKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDD 776 (949)
Q Consensus 697 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~ 776 (949)
..++||||+++ +|.+++.. ....+++.++..++.|++.||+|||++ +|+||||||+||+++.
T Consensus 86 -----~~~lv~e~~~~-~l~~~~~~---------~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~ 147 (346)
T 1ua2_A 86 -----NISLVFDFMET-DLEVIIKD---------NSLVLTPSHIKAYMLMTLQGLEYLHQH---WILHRDLKPNNLLLDE 147 (346)
T ss_dssp -----CCEEEEECCSE-EHHHHHTT---------CCSSCCSSHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECT
T ss_pred -----ceEEEEEcCCC-CHHHHHHh---------cCcCCCHHHHHHHHHHHHHHHHHHHHC---CEECCCCCHHHEEEcC
Confidence 78999999986 89888862 234578889999999999999999988 8999999999999999
Q ss_pred CCceEEeecccceecCCCCCccccccccCccCccCccccCCC-ccCCccchHHHHHHHHHHHhCCCCCccccccCchhhh
Q 039533 777 YMTARVGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGC-EVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHN 855 (949)
Q Consensus 777 ~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~ 855 (949)
++.+||+|||+++......... ....||+.|+|||++.+. .++.++|||||||++|||++|.+||......+. +..
T Consensus 148 ~~~~kl~Dfg~a~~~~~~~~~~--~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~~-~~~ 224 (346)
T 1ua2_A 148 NGVLKLADFGLAKSFGSPNRAY--THQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQ-LTR 224 (346)
T ss_dssp TCCEEECCCGGGSTTTSCCCCC--CCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHH-HHH
T ss_pred CCCEEEEecccceeccCCcccC--CcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHH-HHH
Confidence 9999999999998765433221 234589999999998764 488999999999999999999999864322111 111
Q ss_pred hcc---ccCCCchhhh---cccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHH
Q 039533 856 FGR---KALPDDVMDI---VDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHE 927 (949)
Q Consensus 856 ~~~---~~~~~~~~~~---~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 927 (949)
... ....+.+.+. .+........ .. + ........+..+.+++.+|++.||++|||++|+++.
T Consensus 225 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~-~--~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 292 (346)
T 1ua2_A 225 IFETLGTPTEEQWPDMCSLPDYVTFKSFP-------GI-P--LHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKM 292 (346)
T ss_dssp HHHHHCCCCTTTSSSTTSSTTCCCCCCCC-------CC-C--HHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred HHHHcCCCChhhhhhhccCcccccccccC-------CC-C--hHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcC
Confidence 100 0000000000 0000000000 00 0 000011334678999999999999999999999863
No 234
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00 E-value=6e-38 Score=351.44 Aligned_cols=281 Identities=19% Similarity=0.173 Sum_probs=202.9
Q ss_pred CHHHHHHHhcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCCc-----------chHHHHHHHHHHHhcCCCcc
Q 039533 617 SYQDLYNATSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHG-----------ASRSFIAECKALKSIRHRNL 685 (949)
Q Consensus 617 ~~~~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~-----------~~~~~~~E~~~l~~l~h~ni 685 (949)
...++....++|++.+.||+|+||.||+|.+. +++.||||++...... ..+.+.+|++++++++||||
T Consensus 13 ~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i 91 (362)
T 3pg1_A 13 LIAELHAMQSPYTVQRFISSGSYGAVCAGVDS-EGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNI 91 (362)
T ss_dssp HHHHHHHTTCSCEEEEEEEEETTEEEEEEECT-TSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTB
T ss_pred HHHHHHHhccceEEeEEeccCCCEEEEEEECC-CCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCc
Confidence 45678888999999999999999999999987 4899999998643221 12678999999999999999
Q ss_pred eeEEeeeecccccCCccceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEec
Q 039533 686 VKVLTACLGADYRGNDFKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHC 765 (949)
Q Consensus 686 v~~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHr 765 (949)
+++++++...+.......++||||++ |+|.+++.. ....+++..+..++.|++.||+|||++ +|+||
T Consensus 92 v~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~---------~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~ 158 (362)
T 3pg1_A 92 LGLRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHD---------QRIVISPQHIQYFMYHILLGLHVLHEA---GVVHR 158 (362)
T ss_dssp CCCSEEEEECCTTTCCEEEEEEECCS-EEHHHHHHC---------TTSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCC
T ss_pred cceeeeEEeccCCCcceEEEEEccCC-CCHHHHHHh---------cccCCCHHHHHHHHHHHHHHHHHHHHC---cCEec
Confidence 99999986654344557899999998 588888762 234689999999999999999999988 89999
Q ss_pred CCCCCCeeecCCCceEEeecccceecCCCCCccccccccCccCccCccccCC-CccCCccchHHHHHHHHHHHhCCCCCc
Q 039533 766 DLKPSNVLLDDYMTARVGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVG-CEVSTNGDVYSYGILLLELVIGKKPID 844 (949)
Q Consensus 766 Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDiwSlGvvl~elltg~~Pf~ 844 (949)
||||+||+++.++.+||+|||+++........ ....||+.|+|||++.+ ..++.++|||||||++|||++|+.||.
T Consensus 159 Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~ 235 (362)
T 3pg1_A 159 DLHPGNILLADNNDITICDFNLAREDTADANK---THYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFR 235 (362)
T ss_dssp CCCGGGEEECTTCCEEECCTTC------------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCC
T ss_pred CCChHHEEEcCCCCEEEEecCccccccccccc---ceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCC
Confidence 99999999999999999999999865443322 23458999999999877 678999999999999999999999996
Q ss_pred cccccCchhhhhccccCC-----------CchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccC
Q 039533 845 IMFEGDINLHNFGRKALP-----------DDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSME 913 (949)
Q Consensus 845 ~~~~~~~~~~~~~~~~~~-----------~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~ 913 (949)
...... .........-. ....+.+.......+.. .........+..+.+++.+|++.
T Consensus 236 ~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~li~~~L~~ 303 (362)
T 3pg1_A 236 GSTFYN-QLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPAR-----------AWTAVVPTADPVALDLIAKMLEF 303 (362)
T ss_dssp CSSHHH-HHHHHHHHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCC-----------CHHHHSTTSCHHHHHHHHHHTCS
T ss_pred CCCHHH-HHHHHHHHcCCCChHHhhhccchhhhHHHHhhcccCChh-----------hHHhhCCCCCHHHHHHHHHHhcC
Confidence 432111 00000000000 00111111111111100 00011113345688999999999
Q ss_pred CCCCCCCHHHHHH
Q 039533 914 LPQDRTNMTNVVH 926 (949)
Q Consensus 914 dP~~RPs~~ev~~ 926 (949)
||++|||+.|+++
T Consensus 304 dP~~Rpt~~ell~ 316 (362)
T 3pg1_A 304 NPQRRISTEQALR 316 (362)
T ss_dssp SGGGSCCHHHHHT
T ss_pred ChhhCCCHHHHHc
Confidence 9999999999986
No 235
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00 E-value=7.6e-38 Score=373.24 Aligned_cols=253 Identities=23% Similarity=0.355 Sum_probs=198.7
Q ss_pred CeeeeecCceEEEEEEc--CCCEEEEEEEEecCCC--cchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCccceeEe
Q 039533 632 NLVGVGSFGSVYKGIID--EGRTTIAVKVFNLQHH--GASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFKASVY 707 (949)
Q Consensus 632 ~~lg~G~~g~Vy~~~~~--~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~ 707 (949)
+.||+|+||.||+|.+. .+++.||||+++.... ...+++.+|++++++++||||+++++++... ..++||
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~------~~~lv~ 448 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAE------SWMLVM 448 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEESS------SEEEEE
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecC------CEEEEE
Confidence 47999999999999663 4568899999975432 3357899999999999999999999997422 478999
Q ss_pred eeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEeeccc
Q 039533 708 EFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVGDFGL 787 (949)
Q Consensus 708 e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~DfG~ 787 (949)
||+++|+|.+++. ....+++.++..|+.||+.||+|||++ +|+||||||+||+++.++.+||+|||+
T Consensus 449 E~~~~g~L~~~l~----------~~~~l~~~~~~~i~~qi~~~L~yLH~~---~iiHrDLkp~NILl~~~~~~kL~DFGl 515 (635)
T 4fl3_A 449 EMAELGPLNKYLQ----------QNRHVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGL 515 (635)
T ss_dssp ECCTTEEHHHHHH----------HCTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCTTH
T ss_pred EccCCCCHHHHHh----------hCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeCCCCChHhEEEeCCCCEEEEEcCC
Confidence 9999999999996 235689999999999999999999988 899999999999999999999999999
Q ss_pred ceecCCCCCc-cccccccCccCccCccccCCCccCCccchHHHHHHHHHHHh-CCCCCccccccCchhhhhccccCCCch
Q 039533 788 ARILSPDHTQ-TSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVI-GKKPIDIMFEGDINLHNFGRKALPDDV 865 (949)
Q Consensus 788 a~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~ 865 (949)
|+........ .......+|..|+|||++.+..++.++|||||||++|||++ |+.||....... +
T Consensus 516 a~~~~~~~~~~~~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~--------------~ 581 (635)
T 4fl3_A 516 SKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE--------------V 581 (635)
T ss_dssp HHHTTC-------------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH--------------H
T ss_pred ccccccCccccccccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHH--------------H
Confidence 9877554321 12223346789999999998899999999999999999998 999996432211 1
Q ss_pred hhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHHhHHhh
Q 039533 866 MDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHELQSIKNIL 935 (949)
Q Consensus 866 ~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~~~~ 935 (949)
.+.+........ ...++..+.+++..||+.||++||++++|++.|+++...+
T Consensus 582 ~~~i~~~~~~~~------------------p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~~l 633 (635)
T 4fl3_A 582 TAMLEKGERMGC------------------PAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDV 633 (635)
T ss_dssp HHHHHTTCCCCC------------------CTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHHH
T ss_pred HHHHHcCCCCCC------------------CCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHHh
Confidence 111111100000 0134567889999999999999999999999999987654
No 236
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00 E-value=5.3e-38 Score=351.53 Aligned_cols=201 Identities=25% Similarity=0.356 Sum_probs=174.2
Q ss_pred hcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCC-cchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCccc
Q 039533 625 TSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHH-GASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFK 703 (949)
Q Consensus 625 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 703 (949)
.++|++.+.||+|+||.||+|.+..+++.||+|+++.... ...+.+.+|+.++++++||||+++++++...+ ..
T Consensus 32 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-----~~ 106 (360)
T 3eqc_A 32 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDG-----EI 106 (360)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETT-----EE
T ss_pred cccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECC-----EE
Confidence 3578999999999999999999998999999999976532 33467899999999999999999999976544 78
Q ss_pred eeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEe
Q 039533 704 ASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVG 783 (949)
Q Consensus 704 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~ 783 (949)
++||||+++++|.+++. ....+++..+..++.|++.||+|||+.+ +|+||||||+||+++.++.+||+
T Consensus 107 ~lv~e~~~~~~L~~~l~----------~~~~~~~~~~~~i~~~i~~~l~~lh~~~--~i~H~dlkp~Nil~~~~~~~kl~ 174 (360)
T 3eqc_A 107 SICMEHMDGGSLDQVLK----------KAGRIPEQILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLC 174 (360)
T ss_dssp EEEECCCTTCBHHHHHH----------HHSSCCHHHHHHHHHHHHHHHHHHHHHH--CCCCSCCSGGGEEECTTCCEEEC
T ss_pred EEEEECCCCCCHHHHHH----------HcCCCCHHHHHHHHHHHHHHHHHHHHhC--CEEcCCccHHHEEECCCCCEEEE
Confidence 99999999999999996 2345899999999999999999999732 79999999999999999999999
Q ss_pred ecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccc
Q 039533 784 DFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIM 846 (949)
Q Consensus 784 DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~ 846 (949)
|||+++...... .....||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 175 Dfg~~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~ 233 (360)
T 3eqc_A 175 DFGVSGQLIDSM----ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPP 233 (360)
T ss_dssp CCCCCHHHHHHC--------CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCC
T ss_pred ECCCCccccccc----ccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 999987553221 12346899999999999999999999999999999999999999743
No 237
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00 E-value=2.6e-37 Score=344.63 Aligned_cols=280 Identities=19% Similarity=0.259 Sum_probs=201.8
Q ss_pred hcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCC--cchHHHHHHHHHHHhcCCCcceeEEeeeecccc---cC
Q 039533 625 TSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHH--GASRSFIAECKALKSIRHRNLVKVLTACLGADY---RG 699 (949)
Q Consensus 625 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~---~~ 699 (949)
.++|++.+.||+|+||.||+|++..+++.||||++..... .....+.+|++++++++||||+++++++..... ..
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 95 (351)
T 3mi9_A 16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRC 95 (351)
T ss_dssp GGGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC-------
T ss_pred ccceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccC
Confidence 4679999999999999999999988999999999864432 234678899999999999999999999875431 11
Q ss_pred CccceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCc
Q 039533 700 NDFKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMT 779 (949)
Q Consensus 700 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~ 779 (949)
....++||||+++ ++.+.+.. ....+++.++..++.|++.||+|||++ +|+||||||+||+++.++.
T Consensus 96 ~~~~~lv~e~~~~-~l~~~l~~---------~~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~ 162 (351)
T 3mi9_A 96 KGSIYLVFDFCEH-DLAGLLSN---------VLVKFTLSEIKRVMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGV 162 (351)
T ss_dssp -CEEEEEEECCSE-EHHHHHHC---------TTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSC
T ss_pred CceEEEEEeccCC-CHHHHHhh---------ccCCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCHHHEEEcCCCC
Confidence 3468999999985 77777652 234589999999999999999999988 9999999999999999999
Q ss_pred eEEeecccceecCCCCC--ccccccccCccCccCccccCC-CccCCccchHHHHHHHHHHHhCCCCCccccccCch--hh
Q 039533 780 ARVGDFGLARILSPDHT--QTSSFSVKGSLGYIAPEYGVG-CEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDIN--LH 854 (949)
Q Consensus 780 ~kl~DfG~a~~~~~~~~--~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~--~~ 854 (949)
+||+|||+|+....... ........||+.|+|||++.+ ..++.++|||||||++|||++|+.||......... ..
T Consensus 163 ~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~ 242 (351)
T 3mi9_A 163 LKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALIS 242 (351)
T ss_dssp EEECCCTTCEECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHH
T ss_pred EEEccchhcccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHH
Confidence 99999999987653322 112224568999999998876 45799999999999999999999999754222110 00
Q ss_pred hhccccCCCc-hhh-----hcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 039533 855 NFGRKALPDD-VMD-----IVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVH 926 (949)
Q Consensus 855 ~~~~~~~~~~-~~~-----~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 926 (949)
... ...+.. ... ..+....... .......... .......+.+++.+|++.||++|||++|+++
T Consensus 243 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~-~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 311 (351)
T 3mi9_A 243 QLC-GSITPEVWPNVDNYELYEKLELVKG-------QKRKVKDRLK-AYVRDPYALDLIDKLLVLDPAQRIDSDDALN 311 (351)
T ss_dssp HHH-CCCCTTTSTTGGGCGGGTSSCCCSS-------CCCCHHHHHH-HHHCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred HHh-CCCChhhccccccchhhcccccccc-------cccCHHHHhh-hccCChHHHHHHHHHhcCChhhCCCHHHHhC
Confidence 000 011111 000 0000000000 0000000000 0112456889999999999999999999986
No 238
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00 E-value=1.6e-37 Score=348.45 Aligned_cols=280 Identities=19% Similarity=0.179 Sum_probs=197.8
Q ss_pred hcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCC--cchHHHHHHHHHHHhcCCCcceeEEeeeeccccc-CCc
Q 039533 625 TSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHH--GASRSFIAECKALKSIRHRNLVKVLTACLGADYR-GND 701 (949)
Q Consensus 625 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~-~~~ 701 (949)
.++|.+.+.||+|+||.||+|.+..+++.||||++..... ...+.+.+|+.++++++||||+++++++...+.. ...
T Consensus 41 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 120 (371)
T 4exu_A 41 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY 120 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCC
T ss_pred cccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccce
Confidence 3578899999999999999999999999999999975432 2346788999999999999999999998654421 122
Q ss_pred cceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceE
Q 039533 702 FKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTAR 781 (949)
Q Consensus 702 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~k 781 (949)
..++||||+. ++|.+++. ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+|
T Consensus 121 ~~~lv~e~~~-~~l~~~~~------------~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~k 184 (371)
T 4exu_A 121 DFYLVMPFMQ-TDLQKIMG------------MEFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELK 184 (371)
T ss_dssp CCEEEEECCC-EEHHHHTT------------SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEE
T ss_pred eEEEEEcccc-ccHHHHhh------------cCCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCcCHHHeEECCCCCEE
Confidence 3499999997 58888874 2389999999999999999999988 999999999999999999999
Q ss_pred EeecccceecCCCCCccccccccCccCccCccccCC-CccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhcccc
Q 039533 782 VGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVG-CEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKA 860 (949)
Q Consensus 782 l~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~ 860 (949)
|+|||.++....... ...||+.|+|||++.+ ..++.++|||||||++|||++|+.||......+. +......
T Consensus 185 L~Dfg~a~~~~~~~~-----~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~-~~~i~~~- 257 (371)
T 4exu_A 185 ILDFGLARHADAEMT-----GYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQ-LTQILKV- 257 (371)
T ss_dssp ECSTTCC-------------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHH-HHHHHHH-
T ss_pred EEecCcccccccCcC-----CcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHHH-HHHHHHH-
Confidence 999999986543322 3458999999999887 6789999999999999999999999964321110 0000000
Q ss_pred CCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHH
Q 039533 861 LPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHE 927 (949)
Q Consensus 861 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 927 (949)
......+..+.............................+..+.+++.+|++.||++|||++|+++.
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 324 (371)
T 4exu_A 258 TGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH 324 (371)
T ss_dssp HCCCCHHHHTTCSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred hCCCcHHHHHHhhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhcC
Confidence 0000000000000000000000000000000000111335678999999999999999999999763
No 239
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00 E-value=2.2e-37 Score=339.63 Aligned_cols=252 Identities=22% Similarity=0.286 Sum_probs=198.1
Q ss_pred HhcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCCcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCccc
Q 039533 624 ATSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFK 703 (949)
Q Consensus 624 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 703 (949)
..++|++.+.||+|+||.||+|.+..+++.||+|++.... ..+.+.+|+.++++++||||+++++++...+ ..
T Consensus 27 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-----~~ 99 (314)
T 3com_A 27 PEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES--DLQEIIKEISIMQQCDSPHVVKYYGSYFKNT-----DL 99 (314)
T ss_dssp ---CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS--CCHHHHHHHHHHHTCCCTTBCCEEEEEEETT-----EE
T ss_pred chhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH--HHHHHHHHHHHHHhCCCCCCccEEEEEEeCC-----EE
Confidence 3467999999999999999999999889999999997543 3567899999999999999999999976544 78
Q ss_pred eeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEe
Q 039533 704 ASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVG 783 (949)
Q Consensus 704 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~ 783 (949)
++||||+++++|.+++.. ....+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+
T Consensus 100 ~lv~e~~~~~~L~~~~~~---------~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~ 167 (314)
T 3com_A 100 WIVMEYCGAGSVSDIIRL---------RNKTLTEDEIATILQSTLKGLEYLHFM---RKIHRDIKAGNILLNTEGHAKLA 167 (314)
T ss_dssp EEEEECCTTEEHHHHHHH---------HTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEEC
T ss_pred EEEeecCCCCCHHHHHHh---------cCCCCCHHHHHHHHHHHHHHHHHHHhC---CCcCCCcCHHHEEECCCCCEEEe
Confidence 999999999999999851 235689999999999999999999987 99999999999999999999999
Q ss_pred ecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhccccCCC
Q 039533 784 DFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKALPD 863 (949)
Q Consensus 784 DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~ 863 (949)
|||.+.......... ....||..|+|||++.+..++.++||||||+++|||++|+.||.......... ......
T Consensus 168 dfg~~~~~~~~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~--~~~~~~-- 241 (314)
T 3com_A 168 DFGVAGQLTDTMAKR--NTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAIF--MIPTNP-- 241 (314)
T ss_dssp CCTTCEECBTTBSCB--CCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHH--HHHHSC--
T ss_pred ecccchhhhhhcccc--CccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChHHHHH--HHhcCC--
Confidence 999998765432211 23468999999999999899999999999999999999999996432111000 000000
Q ss_pred chhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 039533 864 DVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVH 926 (949)
Q Consensus 864 ~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 926 (949)
.... . .....+..+.+++.+|++.||++|||+.|+++
T Consensus 242 ------~~~~-~-------------------~~~~~~~~l~~li~~~l~~dp~~Rpt~~~ll~ 278 (314)
T 3com_A 242 ------PPTF-R-------------------KPELWSDNFTDFVKQCLVKSPEQRATATQLLQ 278 (314)
T ss_dssp ------CCCC-S-------------------SGGGSCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred ------Cccc-C-------------------CcccCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 0000 0 00122456889999999999999999999976
No 240
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00 E-value=1.3e-37 Score=347.54 Aligned_cols=284 Identities=20% Similarity=0.215 Sum_probs=203.6
Q ss_pred hcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCC-cchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCccc
Q 039533 625 TSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHH-GASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFK 703 (949)
Q Consensus 625 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 703 (949)
.++|.+.+.||+|+||.||+|++..+++.||||+++.... ....++.+|++++++++||||+++++++....+......
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 89 (353)
T 2b9h_A 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEV 89 (353)
T ss_dssp CTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCE
T ss_pred ccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceE
Confidence 4689999999999999999999998999999999964432 234578899999999999999999999876655556688
Q ss_pred eeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEe
Q 039533 704 ASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVG 783 (949)
Q Consensus 704 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~ 783 (949)
++||||++ ++|.+++. ...+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+
T Consensus 90 ~lv~e~~~-~~L~~~~~-----------~~~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~Nil~~~~~~~kl~ 154 (353)
T 2b9h_A 90 YIIQELMQ-TDLHRVIS-----------TQMLSDDHIQYFIYQTLRAVKVLHGS---NVIHRDLKPSNLLINSNCDLKVC 154 (353)
T ss_dssp EEEECCCS-EEHHHHHH-----------HCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEEC
T ss_pred EEEEeccC-ccHHHHHh-----------hcCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEcCCCcEEEE
Confidence 99999997 58999885 23589999999999999999999987 99999999999999999999999
Q ss_pred ecccceecCCCCCcc--------ccccccCccCccCccccCC-CccCCccchHHHHHHHHHHHhCCCCCccccccCchh-
Q 039533 784 DFGLARILSPDHTQT--------SSFSVKGSLGYIAPEYGVG-CEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINL- 853 (949)
Q Consensus 784 DfG~a~~~~~~~~~~--------~~~~~~gt~~y~aPE~~~~-~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~- 853 (949)
|||+++......... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||..........
T Consensus 155 Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~ 234 (353)
T 2b9h_A 155 DFGLARIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLL 234 (353)
T ss_dssp CCTTCEECC----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHH
T ss_pred ecccccccccccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHH
Confidence 999998765432211 1123468999999998654 678999999999999999999999996432111000
Q ss_pred -hhhccccCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 039533 854 -HNFGRKALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVH 926 (949)
Q Consensus 854 -~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 926 (949)
................. .....+.+..................+..+.+++.+|++.||++|||++|+++
T Consensus 235 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 305 (353)
T 2b9h_A 235 IFGIIGTPHSDNDLRCIE---SPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALE 305 (353)
T ss_dssp HHHHHCCCCSTTTTTTCC---CHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred HHHHhCCCchhccccccc---cchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 00000000000000000 00000000000000000000001134567889999999999999999999987
No 241
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00 E-value=8.8e-38 Score=338.59 Aligned_cols=255 Identities=22% Similarity=0.241 Sum_probs=185.0
Q ss_pred hcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCCc-c-hHHHHHHHHHHHhcCCCcceeEEeeeecccccCCcc
Q 039533 625 TSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHG-A-SRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDF 702 (949)
Q Consensus 625 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~-~-~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 702 (949)
.++|++.+.||+|+||.||+|++..+++.||||+++..... . .+.+.++...++.++||||+++++++...+ .
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~-----~ 80 (290)
T 3fme_A 6 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREG-----D 80 (290)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSS-----S
T ss_pred HHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccC-----C
Confidence 46789999999999999999999889999999999754322 2 233445555678889999999999986544 7
Q ss_pred ceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEE
Q 039533 703 KASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARV 782 (949)
Q Consensus 703 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl 782 (949)
.++||||++ |+|.+++... ......+++..+..++.|++.||+|||+++ +|+||||||+||+++.++.+||
T Consensus 81 ~~lv~e~~~-~~l~~~l~~~------~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~--~i~H~dlkp~Nil~~~~~~~kl 151 (290)
T 3fme_A 81 VWICMELMD-TSLDKFYKQV------IDKGQTIPEDILGKIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKM 151 (290)
T ss_dssp EEEEEECCS-EEHHHHHHHH------HHTTCCCCHHHHHHHHHHHHHHHHHHHHHS--CCCCCCCSGGGCEECTTCCEEB
T ss_pred EEEEEehhc-cchHHHHHHH------HhcCCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEE
Confidence 899999997 4888877521 113456899999999999999999999742 8999999999999999999999
Q ss_pred eecccceecCCCCCccccccccCccCccCcccc----CCCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhcc
Q 039533 783 GDFGLARILSPDHTQTSSFSVKGSLGYIAPEYG----VGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGR 858 (949)
Q Consensus 783 ~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~----~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~ 858 (949)
+|||.++......... ...||+.|+|||++ .+..++.++||||+||++|||++|+.||+............
T Consensus 152 ~Dfg~~~~~~~~~~~~---~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~-- 226 (290)
T 3fme_A 152 CDFGISGYLVDDVAKD---IDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQV-- 226 (290)
T ss_dssp CCC------------------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHHH--
T ss_pred eecCCccccccccccc---ccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchHHHHHHH--
Confidence 9999998765443322 23589999999995 55678999999999999999999999996432211111111
Q ss_pred ccCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 039533 859 KALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVH 926 (949)
Q Consensus 859 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 926 (949)
+.......+. ...+..+.+++.+|++.||++|||++|+++
T Consensus 227 ----------~~~~~~~~~~------------------~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~ 266 (290)
T 3fme_A 227 ----------VEEPSPQLPA------------------DKFSAEFVDFTSQCLKKNSKERPTYPELMQ 266 (290)
T ss_dssp ----------HHSCCCCCCT------------------TTSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred ----------hccCCCCccc------------------ccCCHHHHHHHHHHhhcChhhCcCHHHHHh
Confidence 1111100000 022456789999999999999999999987
No 242
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=1e-37 Score=351.83 Aligned_cols=288 Identities=20% Similarity=0.207 Sum_probs=201.0
Q ss_pred HHHhcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCCcchHHHHHHHHHHHhcCCCcceeEEeeeecccc----
Q 039533 622 YNATSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHGASRSFIAECKALKSIRHRNLVKVLTACLGADY---- 697 (949)
Q Consensus 622 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~---- 697 (949)
....++|++.+.||+|+||.||+|++..+++.||||++..... ...+|++++++++||||+++++++.....
T Consensus 3 ~~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~----~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~ 78 (383)
T 3eb0_A 3 ETSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPR----YKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPK 78 (383)
T ss_dssp ---CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTT----SCCHHHHHHTTCCCTTBCCEEEEEEEC------
T ss_pred ccccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcc----hHHHHHHHHHHcCCCCccchhheeeecCccccc
Confidence 4556789999999999999999999998999999999864432 23479999999999999999999865331
Q ss_pred -----------------------------cCCccceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHH
Q 039533 698 -----------------------------RGNDFKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIA 748 (949)
Q Consensus 698 -----------------------------~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~ 748 (949)
......++||||++ |+|.+.+... ......+++..+..++.|++
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~------~~~~~~l~~~~~~~i~~qi~ 151 (383)
T 3eb0_A 79 PPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSF------IRSGRSIPMNLISIYIYQLF 151 (383)
T ss_dssp -------------------------------CCEEEEEECCCS-EEHHHHHHHH------HHTTCCCCHHHHHHHHHHHH
T ss_pred ccccccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHH------HhcCCCCCHHHHHHHHHHHH
Confidence 23345789999998 5877776521 11345689999999999999
Q ss_pred HHHHHHhhCCCCCeEecCCCCCCeeec-CCCceEEeecccceecCCCCCccccccccCccCccCccccCCC-ccCCccch
Q 039533 749 YALNYLHHDCQPVTAHCDLKPSNVLLD-DYMTARVGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGC-EVSTNGDV 826 (949)
Q Consensus 749 ~gL~~LH~~~~~~ivHrDlkp~NIll~-~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDi 826 (949)
+||+|||++ +|+||||||+||+++ .++.+||+|||.|+......... ...||..|+|||++.+. .++.++||
T Consensus 152 ~aL~~LH~~---gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~~~---~~~~t~~y~aPE~~~~~~~~~~~~Di 225 (383)
T 3eb0_A 152 RAVGFIHSL---GICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEPSV---AYICSRFYRAPELMLGATEYTPSIDL 225 (383)
T ss_dssp HHHHHHHTT---TEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTSCCC---CCCCCSSCCCHHHHTTCSSCCTHHHH
T ss_pred HHHHHHHHC---cCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCCCCc---CcccCCCccCHHHhcCCCCCCcchhh
Confidence 999999977 999999999999998 68899999999999775544322 34589999999998775 48999999
Q ss_pred HHHHHHHHHHHhCCCCCccccccCchhhhhccccCCC---chhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHH
Q 039533 827 YSYGILLLELVIGKKPIDIMFEGDINLHNFGRKALPD---DVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISM 903 (949)
Q Consensus 827 wSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~---~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 903 (949)
||+||++|||++|+.||......+ .+.......-.. .+.. .++....... ..... ...........+..+
T Consensus 226 wslG~il~ell~g~~pf~~~~~~~-~~~~i~~~~g~p~~~~~~~-~~~~~~~~~~---~~~~~--~~~~~~~~~~~~~~~ 298 (383)
T 3eb0_A 226 WSIGCVFGELILGKPLFSGETSID-QLVRIIQIMGTPTKEQMIR-MNPHYTEVRF---PTLKA--KDWRKILPEGTPSLA 298 (383)
T ss_dssp HHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHHHCCCCHHHHHH-HCTTC--CCC---CCCCC--CCHHHHSCTTCCHHH
T ss_pred hhHHHHHHHHHhCCCCCCCCChHH-HHHHHHHHhCCCCHHHHHH-hCcccccccC---CccCc--ccHHhhCCCCCCHHH
Confidence 999999999999999997432211 111111000000 0000 0000000000 00000 000000011235568
Q ss_pred HHHhhccccCCCCCCCCHHHHHH--HHHHhHH
Q 039533 904 VRIGVACSMELPQDRTNMTNVVH--ELQSIKN 933 (949)
Q Consensus 904 ~~l~~~cl~~dP~~RPs~~ev~~--~L~~i~~ 933 (949)
.+++.+|++.||++|||+.|+++ .+++++.
T Consensus 299 ~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~~ 330 (383)
T 3eb0_A 299 IDLLEQILRYEPDLRINPYEAMAHPFFDHLRN 330 (383)
T ss_dssp HHHHHHHCCSSGGGSCCHHHHHTSGGGHHHHH
T ss_pred HHHHHHHccCChhhCCCHHHHhcCHHHHHHHh
Confidence 89999999999999999999984 3444444
No 243
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00 E-value=4.3e-37 Score=335.80 Aligned_cols=255 Identities=21% Similarity=0.313 Sum_probs=199.6
Q ss_pred hcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCC----CcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCC
Q 039533 625 TSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQH----HGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGN 700 (949)
Q Consensus 625 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 700 (949)
.++|.+.+.||+|+||.||+|.+..+++.||+|+++... ....+.+.+|+.++++++||||+++++++... ..
T Consensus 4 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~---~~ 80 (305)
T 2wtk_C 4 IGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNE---EK 80 (305)
T ss_dssp -CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC-----
T ss_pred ccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcC---CC
Confidence 478999999999999999999998899999999997432 23456799999999999999999999997532 23
Q ss_pred ccceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCce
Q 039533 701 DFKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTA 780 (949)
Q Consensus 701 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~ 780 (949)
...++||||++++ +.+++... ....+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+
T Consensus 81 ~~~~lv~e~~~~~-l~~~~~~~--------~~~~~~~~~~~~~~~qi~~al~~LH~~---~i~H~dlkp~NIl~~~~~~~ 148 (305)
T 2wtk_C 81 QKMYMVMEYCVCG-MQEMLDSV--------PEKRFPVCQAHGYFCQLIDGLEYLHSQ---GIVHKDIKPGNLLLTTGGTL 148 (305)
T ss_dssp -CEEEEEECCSEE-HHHHHHHS--------TTCSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCE
T ss_pred CeEEEEehhccCC-HHHHHHhC--------cccccCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCcccEEEcCCCcE
Confidence 4789999999876 77776521 234689999999999999999999988 99999999999999999999
Q ss_pred EEeecccceecCCCCCccccccccCccCccCccccCCCc--cCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhcc
Q 039533 781 RVGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCE--VSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGR 858 (949)
Q Consensus 781 kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~ 858 (949)
||+|||.+................||..|+|||++.+.. ++.++||||||+++|||++|+.||...... ....
T Consensus 149 kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~--~~~~--- 223 (305)
T 2wtk_C 149 KISALGVAEALHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIY--KLFE--- 223 (305)
T ss_dssp EECCCTTCEECCTTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSHH--HHHH---
T ss_pred EeeccccccccCccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchHH--HHHH---
Confidence 999999998876543333333456999999999987643 478999999999999999999999632111 0000
Q ss_pred ccCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHH
Q 039533 859 KALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHE 927 (949)
Q Consensus 859 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 927 (949)
.+..... ..+ ..++..+.+++.+|++.||++|||++|+++.
T Consensus 224 --------~i~~~~~-~~~-------------------~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~ 264 (305)
T 2wtk_C 224 --------NIGKGSY-AIP-------------------GDCGPPLSDLLKGMLEYEPAKRFSIRQIRQH 264 (305)
T ss_dssp --------HHHHCCC-CCC-------------------SSSCHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred --------HHhcCCC-CCC-------------------CccCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 0000000 000 1234567899999999999999999999864
No 244
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00 E-value=3.2e-37 Score=339.43 Aligned_cols=252 Identities=21% Similarity=0.245 Sum_probs=195.5
Q ss_pred hcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCC--------cchHHHHHHHHHHHhcCCCcceeEEeeeeccc
Q 039533 625 TSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHH--------GASRSFIAECKALKSIRHRNLVKVLTACLGAD 696 (949)
Q Consensus 625 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--------~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 696 (949)
.++|.+.+.||+|+||.||+|++..+++.||||++..... .....+.+|++++++++||||+++++++...
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~- 87 (322)
T 2ycf_A 9 RDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAE- 87 (322)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESS-
T ss_pred hhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCC-
Confidence 4579999999999999999999998999999999864321 1224588999999999999999999987432
Q ss_pred ccCCccceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecC
Q 039533 697 YRGNDFKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDD 776 (949)
Q Consensus 697 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~ 776 (949)
..++||||+++++|.+++. ....+++..+..++.|++.||+|||++ +|+||||||+||+++.
T Consensus 88 -----~~~lv~e~~~~~~L~~~~~----------~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~ 149 (322)
T 2ycf_A 88 -----DYYIVLELMEGGELFDKVV----------GNKRLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSS 149 (322)
T ss_dssp -----SEEEEEECCTTEETHHHHS----------TTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESS
T ss_pred -----ceEEEEecCCCCcHHHHHh----------ccCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEec
Confidence 3799999999999999986 234689999999999999999999987 9999999999999987
Q ss_pred CCc---eEEeecccceecCCCCCccccccccCccCccCccccC---CCccCCccchHHHHHHHHHHHhCCCCCccccccC
Q 039533 777 YMT---ARVGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGV---GCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGD 850 (949)
Q Consensus 777 ~~~---~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~ 850 (949)
++. +||+|||+++........ ....||+.|+|||++. ...++.++|||||||++|||++|+.||.......
T Consensus 150 ~~~~~~~kl~Dfg~~~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~ 226 (322)
T 2ycf_A 150 QEEDCLIKITDFGHSKILGETSLM---RTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQV 226 (322)
T ss_dssp SSSSCCEEECCCTTCEECCCCHHH---HHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSS
T ss_pred CCCCCeEEEccCccceeccccccc---ccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHH
Confidence 654 999999999876543221 1345899999999863 5678999999999999999999999996432211
Q ss_pred chhhhhccccCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 039533 851 INLHNFGRKALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVH 926 (949)
Q Consensus 851 ~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 926 (949)
. . .+.+......... ......+..+.+++.+|++.||++|||++|+++
T Consensus 227 ~-~------------~~~~~~~~~~~~~---------------~~~~~~~~~~~~li~~~l~~dP~~Rps~~~~l~ 274 (322)
T 2ycf_A 227 S-L------------KDQITSGKYNFIP---------------EVWAEVSEKALDLVKKLLVVDPKARFTTEEALR 274 (322)
T ss_dssp C-H------------HHHHHHTCCCCCH---------------HHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred H-H------------HHHHHhCccccCc---------------hhhhhcCHHHHHHHHHHcccCHhhCCCHHHHhh
Confidence 1 0 0100000000000 001133567889999999999999999999974
No 245
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00 E-value=5.7e-38 Score=342.24 Aligned_cols=254 Identities=23% Similarity=0.269 Sum_probs=197.3
Q ss_pred HhcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCCcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCccc
Q 039533 624 ATSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFK 703 (949)
Q Consensus 624 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 703 (949)
..++|++.+.||+|+||.||+|++..+++.||+|++........+.+.+|++++++++||||+++++++...+ ..
T Consensus 17 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-----~~ 91 (302)
T 2j7t_A 17 PNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDG-----KL 91 (302)
T ss_dssp GGGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC------CE
T ss_pred CccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCC-----eE
Confidence 3467999999999999999999999889999999998666666788999999999999999999999976544 78
Q ss_pred eeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEe
Q 039533 704 ASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVG 783 (949)
Q Consensus 704 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~ 783 (949)
++||||+++++|.+++.. ....+++..+..++.|++.||+|||+. +++||||||+||+++.++.+||+
T Consensus 92 ~lv~e~~~~~~l~~~~~~---------~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~ 159 (302)
T 2j7t_A 92 WIMIEFCPGGAVDAIMLE---------LDRGLTEPQIQVVCRQMLEALNFLHSK---RIIHRDLKAGNVLMTLEGDIRLA 159 (302)
T ss_dssp EEEEECCTTEEHHHHHHH---------HTSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTSCEEEC
T ss_pred EEEEEeCCCCcHHHHHHh---------hccCCCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHHHEEECCCCCEEEE
Confidence 999999999999998862 234589999999999999999999987 99999999999999999999999
Q ss_pred ecccceecCCCCCccccccccCccCccCcccc-----CCCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhcc
Q 039533 784 DFGLARILSPDHTQTSSFSVKGSLGYIAPEYG-----VGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGR 858 (949)
Q Consensus 784 DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~-----~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~ 858 (949)
|||++....... .......||..|+|||++ .+..++.++||||||+++|||++|+.||........ ......
T Consensus 160 Dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~-~~~~~~ 236 (302)
T 2j7t_A 160 DFGVSAKNLKTL--QKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRV-LLKIAK 236 (302)
T ss_dssp CCHHHHHHHHHH--HC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHHHH-HHHHHH
T ss_pred ECCCCccccccc--cccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHHHH-HHHHhc
Confidence 999875432111 111134589999999987 466789999999999999999999999964321110 000000
Q ss_pred ccCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 039533 859 KALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVH 926 (949)
Q Consensus 859 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 926 (949)
...+ .. .. ....+..+.+++.+|++.||++|||+.|+++
T Consensus 237 ~~~~---------~~-~~-------------------~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 275 (302)
T 2j7t_A 237 SDPP---------TL-LT-------------------PSKWSVEFRDFLKIALDKNPETRPSAAQLLE 275 (302)
T ss_dssp SCCC---------CC-SS-------------------GGGSCHHHHHHHHHHSCSCTTTSCCHHHHTT
T ss_pred cCCc---------cc-CC-------------------ccccCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 0000 00 00 0123456789999999999999999999975
No 246
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00 E-value=2.9e-37 Score=335.94 Aligned_cols=253 Identities=21% Similarity=0.276 Sum_probs=201.5
Q ss_pred HhcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCC---------cchHHHHHHHHHHHhcC-CCcceeEEeeee
Q 039533 624 ATSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHH---------GASRSFIAECKALKSIR-HRNLVKVLTACL 693 (949)
Q Consensus 624 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~---------~~~~~~~~E~~~l~~l~-h~niv~~~~~~~ 693 (949)
..++|.+.+.||+|+||.||+|.+..+++.||||+++.... ...+.+.+|+++++++. ||||+++++++.
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~ 94 (298)
T 1phk_A 15 FYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYE 94 (298)
T ss_dssp CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEE
T ss_pred hhhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeec
Confidence 45789999999999999999999998999999999975431 12356789999999995 999999999976
Q ss_pred cccccCCccceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCee
Q 039533 694 GADYRGNDFKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVL 773 (949)
Q Consensus 694 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIl 773 (949)
... ..++||||+++++|.+++. ....+++..+..++.|++.||+|||+. +|+||||||+||+
T Consensus 95 ~~~-----~~~lv~e~~~~~~L~~~l~----------~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil 156 (298)
T 1phk_A 95 TNT-----FFFLVFDLMKKGELFDYLT----------EKVTLSEKETRKIMRALLEVICALHKL---NIVHRDLKPENIL 156 (298)
T ss_dssp CSS-----EEEEEEECCTTCBHHHHHH----------HHSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEE
T ss_pred cCC-----eEEEEEeccCCCcHHHHHh----------ccCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEE
Confidence 443 7899999999999999996 234689999999999999999999987 9999999999999
Q ss_pred ecCCCceEEeecccceecCCCCCccccccccCccCccCccccC------CCccCCccchHHHHHHHHHHHhCCCCCcccc
Q 039533 774 LDDYMTARVGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGV------GCEVSTNGDVYSYGILLLELVIGKKPIDIMF 847 (949)
Q Consensus 774 l~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~------~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~ 847 (949)
++.++.+||+|||.+.......... ...|++.|+|||++. ...++.++||||||+++|||++|+.||....
T Consensus 157 ~~~~~~~kl~dfg~~~~~~~~~~~~---~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~ 233 (298)
T 1phk_A 157 LDDDMNIKLTDFGFSCQLDPGEKLR---EVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRK 233 (298)
T ss_dssp ECTTCCEEECCCTTCEECCTTCCBC---CCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred EcCCCcEEEecccchhhcCCCcccc---cccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCcc
Confidence 9999999999999998776543322 345899999999874 4568899999999999999999999995321
Q ss_pred ccCchhhhhccccCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 039533 848 EGDINLHNFGRKALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVH 926 (949)
Q Consensus 848 ~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 926 (949)
... .. ..+......... +.....+..+.+++.+|++.||++|||+.|+++
T Consensus 234 ~~~--~~-----------~~~~~~~~~~~~----------------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (298)
T 1phk_A 234 QML--ML-----------RMIMSGNYQFGS----------------PEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALA 283 (298)
T ss_dssp HHH--HH-----------HHHHHTCCCCCT----------------TTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred HHH--HH-----------HHHhcCCcccCc----------------ccccccCHHHHHHHHHHccCCcccCCCHHHHHh
Confidence 110 00 000000000000 000133456889999999999999999999975
No 247
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00 E-value=4.6e-38 Score=369.14 Aligned_cols=259 Identities=27% Similarity=0.423 Sum_probs=206.3
Q ss_pred hcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCCcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCccce
Q 039533 625 TSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFKA 704 (949)
Q Consensus 625 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 704 (949)
.++|++.+.||+|+||.||+|.+. ++..||||+++.... ..+.+.+|++++++++||||+++++++.. ...+
T Consensus 266 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~------~~~~ 337 (535)
T 2h8h_A 266 RESLRLEVKLGQGCFGEVWMGTWN-GTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVSE------EPIY 337 (535)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEET-TTEEEEEEEECTTSS-CHHHHHHHHHHHHHCCCTTBCCEEEEECS------SSCE
T ss_pred hhhhhhheecccCCCeEEEEEEEC-CCceEEEEEeCCCCC-CHHHHHHHHHHHHhCCCCCEeeEEEEEee------ccce
Confidence 456788899999999999999997 457899999975442 35689999999999999999999999753 2579
Q ss_pred eEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEee
Q 039533 705 SVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVGD 784 (949)
Q Consensus 705 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~D 784 (949)
+||||+++|+|.+++... ....+++.+++.|+.||+.||+|||++ +|+||||||+|||+++++.+||+|
T Consensus 338 lv~e~~~~gsL~~~l~~~--------~~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~D 406 (535)
T 2h8h_A 338 IVTEYMSKGSLLDFLKGE--------TGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVAD 406 (535)
T ss_dssp EEECCCTTEEHHHHHSHH--------HHTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECC
T ss_pred EeeehhcCCcHHHHHhhc--------CCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEEcCCCcEEEcc
Confidence 999999999999999621 224589999999999999999999987 899999999999999999999999
Q ss_pred cccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHh-CCCCCccccccCchhhhhccccCCC
Q 039533 785 FGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVI-GKKPIDIMFEGDINLHNFGRKALPD 863 (949)
Q Consensus 785 fG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~ 863 (949)
||+++...... ........++..|+|||++.+..++.++|||||||++|||++ |+.||......+ ..
T Consensus 407 FG~a~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~~--~~--------- 474 (535)
T 2h8h_A 407 FGLARLIEDNE-YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE--VL--------- 474 (535)
T ss_dssp TTSTTTCCCHH-HHTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHHH--HH---------
T ss_pred cccceecCCCc-eecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH--HH---------
Confidence 99998654321 111123347789999999988889999999999999999999 999996432111 00
Q ss_pred chhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHHhHHhh
Q 039533 864 DVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHELQSIKNIL 935 (949)
Q Consensus 864 ~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~~~~ 935 (949)
+.+...... +....++..+.+++.+||+.||++|||+++|++.|+++....
T Consensus 475 ---~~i~~~~~~------------------~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~~ 525 (535)
T 2h8h_A 475 ---DQVERGYRM------------------PCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTST 525 (535)
T ss_dssp ---HHHHTTCCC------------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSCCC
T ss_pred ---HHHHcCCCC------------------CCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHhhcc
Confidence 000000000 000134556889999999999999999999999999876543
No 248
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00 E-value=7e-38 Score=339.56 Aligned_cols=261 Identities=25% Similarity=0.336 Sum_probs=195.6
Q ss_pred hcCCCCCCeeeeecCceEEEEEEcC-CC--EEEEEEEEecCC---CcchHHHHHHHHHHHhcCCCcceeEEeeeeccccc
Q 039533 625 TSGFSSANLVGVGSFGSVYKGIIDE-GR--TTIAVKVFNLQH---HGASRSFIAECKALKSIRHRNLVKVLTACLGADYR 698 (949)
Q Consensus 625 ~~~y~~~~~lg~G~~g~Vy~~~~~~-~~--~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 698 (949)
.++|++.+.||+|+||.||+|++.. ++ ..||||+++... ....+.+.+|++++++++||||+++++++...
T Consensus 17 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--- 93 (291)
T 1u46_A 17 EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTP--- 93 (291)
T ss_dssp GGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS---
T ss_pred hhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccC---
Confidence 3578899999999999999998743 22 369999987542 23456889999999999999999999997542
Q ss_pred CCccceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCC
Q 039533 699 GNDFKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYM 778 (949)
Q Consensus 699 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~ 778 (949)
..++||||+++++|.+++.. ....+++.++..++.|++.||+|||++ +|+||||||+||+++.++
T Consensus 94 ---~~~~v~e~~~~~~L~~~l~~---------~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nili~~~~ 158 (291)
T 1u46_A 94 ---PMKMVTELAPLGSLLDRLRK---------HQGHFLLGTLSRYAVQVAEGMGYLESK---RFIHRDLAARNLLLATRD 158 (291)
T ss_dssp ---SCEEEEECCTTCBHHHHHHH---------HGGGSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETT
T ss_pred ---CceeeEecccCCCHHHHHHh---------ccCCcCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEEcCCC
Confidence 37899999999999999962 234589999999999999999999987 999999999999999999
Q ss_pred ceEEeecccceecCCCCCcc-ccccccCccCccCccccCCCccCCccchHHHHHHHHHHHh-CCCCCccccccCchhhhh
Q 039533 779 TARVGDFGLARILSPDHTQT-SSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVI-GKKPIDIMFEGDINLHNF 856 (949)
Q Consensus 779 ~~kl~DfG~a~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~ellt-g~~Pf~~~~~~~~~~~~~ 856 (949)
.+||+|||+++......... ......+|..|+|||++.+..++.++||||||+++|||++ |+.||....... ...
T Consensus 159 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~--~~~- 235 (291)
T 1u46_A 159 LVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQ--ILH- 235 (291)
T ss_dssp EEEECCCTTCEECCC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH--HHH-
T ss_pred CEEEccccccccccccccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCHHH--HHH-
Confidence 99999999998876544321 1223457889999999988889999999999999999999 999996432111 000
Q ss_pred ccccCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHHhHHh
Q 039533 857 GRKALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHELQSIKNI 934 (949)
Q Consensus 857 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~~~ 934 (949)
.+........ ....++..+.+++.+|++.||++|||+.|+++.|+++...
T Consensus 236 ----------~~~~~~~~~~------------------~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~ 285 (291)
T 1u46_A 236 ----------KIDKEGERLP------------------RPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQPT 285 (291)
T ss_dssp ----------HHHTSCCCCC------------------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC--
T ss_pred ----------HHHccCCCCC------------------CCcCcCHHHHHHHHHHccCCcccCcCHHHHHHHHHHhCcc
Confidence 0000000000 0012345688999999999999999999999999988654
No 249
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00 E-value=8.7e-38 Score=344.79 Aligned_cols=266 Identities=23% Similarity=0.305 Sum_probs=199.8
Q ss_pred cCHHHHHHHhcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCCcchHHHHHHHHHHHhc-CCCcceeEEeeeec
Q 039533 616 LSYQDLYNATSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHGASRSFIAECKALKSI-RHRNLVKVLTACLG 694 (949)
Q Consensus 616 ~~~~~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~ 694 (949)
+++.++....++|++.+.||+|+||.||+|++..+++.||||++.... ...+.+.+|+.+++++ +||||+++++++..
T Consensus 14 ~~~~~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~ 92 (326)
T 2x7f_A 14 IDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIK 92 (326)
T ss_dssp --CCCCCCCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS-STTHHHHHHHHHHHHHCCSTTBCCEEEEEEE
T ss_pred ccchhccCCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCc-ccHHHHHHHHHHHHhccCCCCeeeeeeEEee
Confidence 334445556788999999999999999999998889999999997543 3357889999999999 79999999999875
Q ss_pred ccccC-CccceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCee
Q 039533 695 ADYRG-NDFKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVL 773 (949)
Q Consensus 695 ~~~~~-~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIl 773 (949)
....+ ....++||||+++++|.+++... ....+++..+..++.|++.||+|||++ +|+||||||+||+
T Consensus 93 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--------~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl 161 (326)
T 2x7f_A 93 KNPPGMDDQLWLVMEFCGAGSVTDLIKNT--------KGNTLKEEWIAYICREILRGLSHLHQH---KVIHRDIKGQNVL 161 (326)
T ss_dssp CC--CCCCEEEEEEECCTTEEHHHHHHHS--------GGGCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEE
T ss_pred ccCccccceEEEEEEcCCCCcHHHHHHhc--------ccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCcHHHEE
Confidence 43211 34689999999999999999621 234688999999999999999999987 8999999999999
Q ss_pred ecCCCceEEeecccceecCCCCCccccccccCccCccCccccC-----CCccCCccchHHHHHHHHHHHhCCCCCccccc
Q 039533 774 LDDYMTARVGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGV-----GCEVSTNGDVYSYGILLLELVIGKKPIDIMFE 848 (949)
Q Consensus 774 l~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~ 848 (949)
++.++.+||+|||++......... .....||+.|+|||++. +..++.++|||||||++|||++|+.||.....
T Consensus 162 ~~~~~~~kl~Dfg~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~ 239 (326)
T 2x7f_A 162 LTENAEVKLVDFGVSAQLDRTVGR--RNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHP 239 (326)
T ss_dssp ECTTCCEEECCCTTTC---------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCH
T ss_pred EcCCCCEEEeeCcCceecCcCccc--cccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcH
Confidence 999999999999999876433221 12345899999999987 45689999999999999999999999964321
Q ss_pred cCchhhhhccccCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 039533 849 GDINLHNFGRKALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVH 926 (949)
Q Consensus 849 ~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 926 (949)
... ........ .+.... ...+..+.+++.+||+.||++|||++|+++
T Consensus 240 ~~~-~~~~~~~~---------~~~~~~---------------------~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 286 (326)
T 2x7f_A 240 MRA-LFLIPRNP---------APRLKS---------------------KKWSKKFQSFIESCLVKNHSQRPATEQLMK 286 (326)
T ss_dssp HHH-HHHHHHSC---------CCCCSC---------------------SCSCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred HHH-HHHhhcCc---------cccCCc---------------------cccCHHHHHHHHHHhccChhhCCCHHHHhh
Confidence 110 00000000 000000 012346789999999999999999999976
No 250
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00 E-value=1.3e-37 Score=345.48 Aligned_cols=256 Identities=21% Similarity=0.241 Sum_probs=197.0
Q ss_pred HhcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCC-cchHHHHHHHHH-HHhcCCCcceeEEeeeecccccCCc
Q 039533 624 ATSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHH-GASRSFIAECKA-LKSIRHRNLVKVLTACLGADYRGND 701 (949)
Q Consensus 624 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~-l~~l~h~niv~~~~~~~~~~~~~~~ 701 (949)
..++|++.+.||+|+||.||+|++..+++.||||+++.... ....++..|..+ ++.++||||+++++++...+
T Consensus 49 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~----- 123 (340)
T 3an0_A 49 KADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREG----- 123 (340)
T ss_dssp CSSCEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCCHHHHHHHHHHHHHHTTCCCTTTCCEEEEEECSS-----
T ss_pred ehhheeEeeEecccCCEEEEEEEEcCCCCEEEEEEeccccCcHHHHHHHHHHHHHHhhcCCCcEEEEeeEEEeCC-----
Confidence 34678889999999999999999988999999999975432 233455666665 67789999999999986544
Q ss_pred cceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceE
Q 039533 702 FKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTAR 781 (949)
Q Consensus 702 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~k 781 (949)
..++||||+++ +|.+++... ......+++..+..++.|++.||+|||++. +|+||||||+||+++.++.+|
T Consensus 124 ~~~lv~e~~~~-~L~~~l~~~------~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~--~ivH~Dlkp~NIl~~~~~~~k 194 (340)
T 3an0_A 124 DVWICMELMDT-SLDKFYKQV------IDKGQTIPEDILGKIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVK 194 (340)
T ss_dssp CEEEEECCCSE-EHHHHHHHH------HHTSCCCCHHHHHHHHHHHHHHHHHHHHHT--CCCCCSCCSTTEEECSTTCEE
T ss_pred cEEEEHHHhhC-cHHHHHHHH------HhcCCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEE
Confidence 78999999975 998888521 112456899999999999999999999642 899999999999999999999
Q ss_pred EeecccceecCCCCCccccccccCccCccCccccC----CCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhc
Q 039533 782 VGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGV----GCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFG 857 (949)
Q Consensus 782 l~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~----~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~ 857 (949)
|+|||+++....... .....||+.|+|||++. ...++.++|||||||++|||++|+.||+........+.
T Consensus 195 l~Dfg~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~~~~~~~~~~~~--- 268 (340)
T 3an0_A 195 MCDFGISGYLVDSVA---KTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLK--- 268 (340)
T ss_dssp ECCCSHHHHHSCHHH---HHHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHH---
T ss_pred EeeCCCceecccccc---cccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCCCccccchHHHHH---
Confidence 999999987643221 12346999999999964 34689999999999999999999999964321111111
Q ss_pred cccCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 039533 858 RKALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVH 926 (949)
Q Consensus 858 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 926 (949)
..+.......+. ..++..+.+++.+||+.||++|||+.|+++
T Consensus 269 ---------~~~~~~~~~~~~------------------~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 310 (340)
T 3an0_A 269 ---------QVVEEPSPQLPA------------------DKFSAEFVDFTSQCLKKNSKERPTYPELMQ 310 (340)
T ss_dssp ---------HHHHSCCCCCCG------------------GGSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred ---------HHhcCCCCCCCc------------------ccCCHHHHHHHHHHccCCcccCcCHHHHhc
Confidence 111111000000 023456889999999999999999999986
No 251
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00 E-value=1.6e-37 Score=348.93 Aligned_cols=259 Identities=11% Similarity=0.010 Sum_probs=180.3
Q ss_pred cCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCC---cchHHHHHHHHHHHhc--CCCcceeEEee-------ee
Q 039533 626 SGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHH---GASRSFIAECKALKSI--RHRNLVKVLTA-------CL 693 (949)
Q Consensus 626 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l--~h~niv~~~~~-------~~ 693 (949)
.+|.+.+.||+|+||.||+|++..+++.||||+++.... ...+.+.+|+.+++.+ +||||++++.. +.
T Consensus 62 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~~ 141 (371)
T 3q60_A 62 RKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAVA 141 (371)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEEE
T ss_pred eeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehhee
Confidence 458889999999999999999998999999999986543 2345677885555544 69998886533 22
Q ss_pred ccccc------------CCccceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHH------HHHHHHHHHHHHHHh
Q 039533 694 GADYR------------GNDFKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQR------LNIAIDIAYALNYLH 755 (949)
Q Consensus 694 ~~~~~------------~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~------~~i~~qi~~gL~~LH 755 (949)
..... .....++||||++ |+|.+++... ...+.+..+ ..++.|++.||+|||
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~---------~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH 211 (371)
T 3q60_A 142 VQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTL---------DFVYVFRGDEGILALHILTAQLIRLAANLQ 211 (371)
T ss_dssp ETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHH---------HHSCCCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHh---------ccccchhhhhhhhhHHHHHHHHHHHHHHHH
Confidence 11100 0134799999998 8999999721 122344455 678899999999999
Q ss_pred hCCCCCeEecCCCCCCeeecCCCceEEeecccceecCCCCCccccccccCccCccCccccCC--CccCCccchHHHHHHH
Q 039533 756 HDCQPVTAHCDLKPSNVLLDDYMTARVGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVG--CEVSTNGDVYSYGILL 833 (949)
Q Consensus 756 ~~~~~~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~sDiwSlGvvl 833 (949)
++ +|+||||||+|||++.++.+||+|||+|+....... ...+|+.|+|||++.+ ..++.++|||||||++
T Consensus 212 ~~---~ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~~~~-----~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il 283 (371)
T 3q60_A 212 SK---GLVHGHFTPDNLFIMPDGRLMLGDVSALWKVGTRGP-----ASSVPVTYAPREFLNASTATFTHALNAWQLGLSI 283 (371)
T ss_dssp HT---TEEETTCSGGGEEECTTSCEEECCGGGEEETTCEEE-----GGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHH
T ss_pred HC---CCccCcCCHHHEEECCCCCEEEEecceeeecCCCcc-----CccCCcCCcChhhccCCCCCcCccccHHHHHHHH
Confidence 88 899999999999999999999999999987643221 2347799999999987 6799999999999999
Q ss_pred HHHHhCCCCCccccccCchhhhhccccCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccC
Q 039533 834 LELVIGKKPIDIMFEGDINLHNFGRKALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSME 913 (949)
Q Consensus 834 ~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~ 913 (949)
|||++|+.||......... .+...... ........ ++.....+..+.+++.+||+.
T Consensus 284 ~elltg~~Pf~~~~~~~~~--~~~~~~~~----~~~~~~~~------------------~~~~~~~~~~~~~li~~~L~~ 339 (371)
T 3q60_A 284 YRVWCLFLPFGLVTPGIKG--SWKRPSLR----VPGTDSLA------------------FGSCTPLPDFVKTLIGRFLNF 339 (371)
T ss_dssp HHHHHSSCSTTBCCTTCTT--CCCBCCTT----SCCCCSCC------------------CTTSSCCCHHHHHHHHHHTCS
T ss_pred HHHHhCCCCCCCcCccccc--chhhhhhh----hccccccc------------------hhhccCCCHHHHHHHHHHcCC
Confidence 9999999999754322111 00000000 00000000 000012345688999999999
Q ss_pred CCCCCCCHHHHHH
Q 039533 914 LPQDRTNMTNVVH 926 (949)
Q Consensus 914 dP~~RPs~~ev~~ 926 (949)
||++|||+.|+++
T Consensus 340 dP~~Rpt~~e~l~ 352 (371)
T 3q60_A 340 DRRRRLLPLEAME 352 (371)
T ss_dssp STTTCCCHHHHTT
T ss_pred ChhhCCCHHHHhc
Confidence 9999999999974
No 252
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00 E-value=3.2e-37 Score=370.36 Aligned_cols=245 Identities=22% Similarity=0.253 Sum_probs=198.9
Q ss_pred HhcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecC---CCcchHHHHHHHHHHHhc-CCCcceeEEeeeecccccC
Q 039533 624 ATSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQ---HHGASRSFIAECKALKSI-RHRNLVKVLTACLGADYRG 699 (949)
Q Consensus 624 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~ 699 (949)
..++|.+.++||+|+||.||+|++..+++.||||+++.. .....+.+..|..++..+ +||+|+++++++...+
T Consensus 339 ~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~--- 415 (674)
T 3pfq_A 339 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMD--- 415 (674)
T ss_dssp -CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSS---
T ss_pred cccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCC---
Confidence 457899999999999999999999989999999999743 233456788999999988 7999999999865443
Q ss_pred CccceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCc
Q 039533 700 NDFKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMT 779 (949)
Q Consensus 700 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~ 779 (949)
..++||||+++|+|.+++. ....+++..++.|+.||+.||+|||++ +|+||||||+|||++.+++
T Consensus 416 --~~~lV~E~~~gg~L~~~l~----------~~~~~~~~~~~~~~~qi~~aL~~LH~~---gIiHrDLKp~NILl~~~g~ 480 (674)
T 3pfq_A 416 --RLYFVMEYVNGGDLMYHIQ----------QVGRFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGH 480 (674)
T ss_dssp --EEEEEEECCCSCBHHHHHH----------HHSSCCHHHHHHHHHHHHHHHHHHHHT---SEECCCCCSTTEEECSSSC
T ss_pred --EEEEEEeCcCCCcHHHHHH----------hcCCCCHHHHHHHHHHHHHHHHHHHhC---CeEeccCChhhEEEcCCCc
Confidence 7899999999999999996 234689999999999999999999988 9999999999999999999
Q ss_pred eEEeecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhccc
Q 039533 780 ARVGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRK 859 (949)
Q Consensus 780 ~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~ 859 (949)
+||+|||+|+........ .....||+.|+|||++.+..++.++|||||||++|||++|+.||......+ .
T Consensus 481 ikL~DFGla~~~~~~~~~--~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~~~--~------ 550 (674)
T 3pfq_A 481 IKIADFGMCKENIWDGVT--TKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDE--L------ 550 (674)
T ss_dssp EEECCCTTCEECCCTTCC--BCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHH--H------
T ss_pred EEEeecceeeccccCCcc--cccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCHHH--H------
Confidence 999999999865433322 224569999999999999999999999999999999999999996432110 0
Q ss_pred cCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCH
Q 039533 860 ALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNM 921 (949)
Q Consensus 860 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~ 921 (949)
...++..... .+ ...+..+.+++.+|++.||++||++
T Consensus 551 -----~~~i~~~~~~-~p-------------------~~~s~~~~~li~~lL~~dP~~R~~~ 587 (674)
T 3pfq_A 551 -----FQSIMEHNVA-YP-------------------KSMSKEAVAICKGLMTKHPGKRLGC 587 (674)
T ss_dssp -----HHHHHSSCCC-CC-------------------TTSCHHHHHHHHHHSCSSSTTCTTC
T ss_pred -----HHHHHhCCCC-CC-------------------ccCCHHHHHHHHHHccCCHHHCCCC
Confidence 0111111110 00 0224567899999999999999997
No 253
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00 E-value=1.8e-37 Score=337.82 Aligned_cols=270 Identities=24% Similarity=0.298 Sum_probs=199.3
Q ss_pred cCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCC--CcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCccc
Q 039533 626 SGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQH--HGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFK 703 (949)
Q Consensus 626 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 703 (949)
++|++.+.||+|+||.||+|++..+++.||||+++... ....+.+.+|+.++++++||||+++++++...+ ..
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-----~~ 77 (299)
T 2r3i_A 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTEN-----KL 77 (299)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETT-----EE
T ss_pred chhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCC-----ce
Confidence 67899999999999999999999889999999986443 223467889999999999999999999976544 78
Q ss_pred eeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEe
Q 039533 704 ASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVG 783 (949)
Q Consensus 704 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~ 783 (949)
++||||++ ++|.+++... ....+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+
T Consensus 78 ~lv~e~~~-~~L~~~~~~~--------~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~ 145 (299)
T 2r3i_A 78 YLVFEFLH-QDLKKFMDAS--------ALTGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLA 145 (299)
T ss_dssp EEEEECCS-EEHHHHHHHT--------TTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEEC
T ss_pred EEEEEccc-CCHHHHHHhh--------hccCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHeEEcCCCCEEEC
Confidence 99999997 5999998621 224588999999999999999999988 99999999999999999999999
Q ss_pred ecccceecCCCCCccccccccCccCccCccccCCCc-cCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhccc-cC
Q 039533 784 DFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCE-VSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRK-AL 861 (949)
Q Consensus 784 DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~-~~ 861 (949)
|||.++......... ....||+.|+|||++.+.. ++.++|||||||++|||++|+.||......+. ....... ..
T Consensus 146 dfg~~~~~~~~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~-~~~~~~~~~~ 222 (299)
T 2r3i_A 146 DFGLARAFGVPVRTY--THEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQ-LFRIFRTLGT 222 (299)
T ss_dssp STTHHHHHCCCSBCT--TSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH-HHHHHHHHCC
T ss_pred cchhhhhccCCcccc--CcccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCCccHHHH-HHHHHHHhCC
Confidence 999998765433211 1345899999999988765 78999999999999999999999964422111 1111000 00
Q ss_pred CCc-----hhhh--cccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 039533 862 PDD-----VMDI--VDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVH 926 (949)
Q Consensus 862 ~~~-----~~~~--~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 926 (949)
+.. .... .++....... ... .......+..+.+++.+|++.||++|||+.|+++
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~--------~~~---~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~~l~ 283 (299)
T 2r3i_A 223 PDEVVWPGVTSMPDYKPSFPKWAR--------QDF---SKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 283 (299)
T ss_dssp CCTTTSTTGGGSTTCCTTSCCCCC--------CCH---HHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred CchhhhhHhhcCcccchhhhcccc--------hhh---HhhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 000 0000 0000000000 000 0000123456889999999999999999999986
No 254
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00 E-value=1.1e-37 Score=340.22 Aligned_cols=269 Identities=19% Similarity=0.301 Sum_probs=184.3
Q ss_pred HhcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCC-CcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCcc
Q 039533 624 ATSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQH-HGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDF 702 (949)
Q Consensus 624 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 702 (949)
..++|.+.+.||+|+||.||+|.+..+++.||||++.... ....+++.+|+.++++++||||+++++++...+ .
T Consensus 13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-----~ 87 (303)
T 2vwi_A 13 NRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKD-----E 87 (303)
T ss_dssp CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSS-----C
T ss_pred chhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecC-----C
Confidence 4578999999999999999999998788999999986443 233467889999999999999999999976554 7
Q ss_pred ceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEE
Q 039533 703 KASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARV 782 (949)
Q Consensus 703 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl 782 (949)
.++||||+++++|.+++....... ......+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||
T Consensus 88 ~~lv~e~~~~~~L~~~l~~~~~~~--~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl 162 (303)
T 2vwi_A 88 LWLVMKLLSGGSVLDIIKHIVAKG--EHKSGVLDESTIATILREVLEGLEYLHKN---GQIHRDVKAGNILLGEDGSVQI 162 (303)
T ss_dssp EEEEEECCTTCBHHHHHHHHHHTT--TTTTCSSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTCCEEE
T ss_pred cEEEehhccCCchHHHHHHHhhcc--ccccCCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCCChhhEEEcCCCCEEE
Confidence 899999999999999986211100 01235689999999999999999999987 8999999999999999999999
Q ss_pred eecccceecCCCCC---ccccccccCccCccCccccCC-CccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhcc
Q 039533 783 GDFGLARILSPDHT---QTSSFSVKGSLGYIAPEYGVG-CEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGR 858 (949)
Q Consensus 783 ~DfG~a~~~~~~~~---~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~ 858 (949)
+|||.+........ ........||+.|+|||++.+ ..++.++||||||+++|||++|+.||........... ...
T Consensus 163 ~dfg~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~-~~~ 241 (303)
T 2vwi_A 163 ADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLML-TLQ 241 (303)
T ss_dssp CCCHHHHHCC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHH-HHT
T ss_pred EeccchheeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhHHHH-Hhc
Confidence 99999976654321 111123458999999999875 4688999999999999999999999965422211100 000
Q ss_pred ccCCCchh-hhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 039533 859 KALPDDVM-DIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVH 926 (949)
Q Consensus 859 ~~~~~~~~-~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 926 (949)
. ...... ...+.... ...+..+.+++.+|++.||++|||+.|+++
T Consensus 242 ~-~~~~~~~~~~~~~~~----------------------~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 287 (303)
T 2vwi_A 242 N-DPPSLETGVQDKEML----------------------KKYGKSFRKMISLCLQKDPEKRPTAAELLR 287 (303)
T ss_dssp S-SCCCTTC-----CCC----------------------CCCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred c-CCCccccccccchhh----------------------hhhhHHHHHHHHHHccCChhhCcCHHHHhh
Confidence 0 000000 00000000 122346789999999999999999999986
No 255
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00 E-value=3.3e-37 Score=339.20 Aligned_cols=280 Identities=19% Similarity=0.262 Sum_probs=196.7
Q ss_pred hcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCCcchHHHHHHHHHHHhcCCCcceeEEeeeeccc--------
Q 039533 625 TSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHGASRSFIAECKALKSIRHRNLVKVLTACLGAD-------- 696 (949)
Q Consensus 625 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~-------- 696 (949)
.++|.+.+.||+|+||.||+|.+..+++.||+|++........+.+.+|++++++++||||+++++++....
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 89 (320)
T 2i6l_A 10 GSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVG 89 (320)
T ss_dssp TTTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC---
T ss_pred CCceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccccccccc
Confidence 367899999999999999999999889999999998666556678999999999999999999999875332
Q ss_pred -ccCCccceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeec
Q 039533 697 -YRGNDFKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLD 775 (949)
Q Consensus 697 -~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~ 775 (949)
.......++||||++ |+|.+++. ...+++..+..++.|++.||+|||++ +|+||||||+||+++
T Consensus 90 ~~~~~~~~~lv~e~~~-~~L~~~~~-----------~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~ 154 (320)
T 2i6l_A 90 SLTELNSVYIVQEYME-TDLANVLE-----------QGPLLEEHARLFMYQLLRGLKYIHSA---NVLHRDLKPANLFIN 154 (320)
T ss_dssp -CCSCSEEEEEEECCS-EEHHHHHT-----------TCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEE
T ss_pred cccccCceeEEeeccC-CCHHHHhh-----------cCCccHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEc
Confidence 123456899999998 69999986 23588999999999999999999987 999999999999997
Q ss_pred -CCCceEEeecccceecCCCCCc-cccccccCccCccCccccCC-CccCCccchHHHHHHHHHHHhCCCCCccccccCch
Q 039533 776 -DYMTARVGDFGLARILSPDHTQ-TSSFSVKGSLGYIAPEYGVG-CEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDIN 852 (949)
Q Consensus 776 -~~~~~kl~DfG~a~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~-~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~ 852 (949)
+++.+||+|||.++........ .......+|..|+|||++.+ ..++.++|||||||++|||++|+.||....... .
T Consensus 155 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~-~ 233 (320)
T 2i6l_A 155 TEDLVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELE-Q 233 (320)
T ss_dssp TTTTEEEECCCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH-H
T ss_pred CCCCeEEEccCccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHH-H
Confidence 5679999999999876543221 11123457999999998765 678999999999999999999999996432211 0
Q ss_pred hhhhccccCCC----chhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 039533 853 LHNFGRKALPD----DVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVH 926 (949)
Q Consensus 853 ~~~~~~~~~~~----~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 926 (949)
..... ...+. ...++.+. . +. ....................+..+.+++.+|++.||++|||++|+++
T Consensus 234 ~~~~~-~~~~~~~~~~~~~~~~~-~---~~-~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 305 (320)
T 2i6l_A 234 MQLIL-ESIPVVHEEDRQELLSV-I---PV-YIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALS 305 (320)
T ss_dssp HHHHH-HHSCCCCHHHHHHHHTT-S---CH-HHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred HHHHH-HhcCCCchhhhhhhhhc-C---cc-cccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhC
Confidence 00000 00000 00000000 0 00 00000000000000001134567899999999999999999999976
No 256
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00 E-value=5.4e-37 Score=343.46 Aligned_cols=291 Identities=20% Similarity=0.228 Sum_probs=194.2
Q ss_pred HHHHHHhcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCCcchHHHHHHHHHHHhcCCCcceeEEeeeeccccc
Q 039533 619 QDLYNATSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHGASRSFIAECKALKSIRHRNLVKVLTACLGADYR 698 (949)
Q Consensus 619 ~~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 698 (949)
.+.....++|++.+.||+|+||.||+|++..+++.||||++.... .......+|++.+++++||||+++++++...+..
T Consensus 16 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~ 94 (360)
T 3e3p_A 16 ERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDP-RFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGER 94 (360)
T ss_dssp HHHHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECCT-TCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSS
T ss_pred hhchhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCc-cccHHHHHHHHHHHhcCCCCcccHHHhhhccccc
Confidence 455677889999999999999999999999899999999986443 2335677888889999999999999998654321
Q ss_pred --CCccceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHh--hCCCCCeEecCCCCCCeee
Q 039533 699 --GNDFKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLH--HDCQPVTAHCDLKPSNVLL 774 (949)
Q Consensus 699 --~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH--~~~~~~ivHrDlkp~NIll 774 (949)
.....++||||+++ ++.+.+... ......+++..+..++.|++.||.||| +. +|+||||||+||++
T Consensus 95 ~~~~~~~~lv~e~~~~-~l~~~~~~~------~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~---~ivH~Dlkp~NIll 164 (360)
T 3e3p_A 95 DRRDIYLNVVMEYVPD-TLHRCCRNY------YRRQVAPPPILIKVFLFQLIRSIGCLHLPSV---NVCHRDIKPHNVLV 164 (360)
T ss_dssp CTTCEEEEEEEECCSC-BHHHHHHHH------HTTTCCCCHHHHHHHHHHHHHHHHHHTSTTT---CCBCSCCCGGGEEE
T ss_pred cccceeEEEEeecccc-cHHHHHHHH------hhcccCCCHHHHHHHHHHHHHHHHHHhCCCC---CeecCcCCHHHEEE
Confidence 22237899999986 444433210 013456889999999999999999999 55 99999999999999
Q ss_pred cC-CCceEEeecccceecCCCCCccccccccCccCccCccccCCCc-cCCccchHHHHHHHHHHHhCCCCCccccccCch
Q 039533 775 DD-YMTARVGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCE-VSTNGDVYSYGILLLELVIGKKPIDIMFEGDIN 852 (949)
Q Consensus 775 ~~-~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~ 852 (949)
+. ++.+||+|||+++......... ...||+.|+|||++.+.. ++.++|||||||++|||++|+.||....... .
T Consensus 165 ~~~~~~~kl~Dfg~a~~~~~~~~~~---~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~-~ 240 (360)
T 3e3p_A 165 NEADGTLKLCDFGSAKKLSPSEPNV---AYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAG-Q 240 (360)
T ss_dssp ETTTTEEEECCCTTCBCCCTTSCCC---STTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-H
T ss_pred eCCCCcEEEeeCCCceecCCCCCcc---cccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHH-H
Confidence 96 8999999999998766543322 345899999999987654 8999999999999999999999996432211 1
Q ss_pred hhhhcccc--CCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 039533 853 LHNFGRKA--LPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVH 926 (949)
Q Consensus 853 ~~~~~~~~--~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 926 (949)
+....+.. .+......+++...... ....................+..+.+++.+|++.||++|||+.|+++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 314 (360)
T 3e3p_A 241 LHEIVRVLGCPSREVLRKLNPSHTDVD--LYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALC 314 (360)
T ss_dssp HHHHHHHHCCCCHHHHHHHCTTCCCGG--GGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred HHHHHHHcCCCCHHHHHhcccchhhcc--ccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhc
Confidence 11111100 00011111111100000 00000000000000001124567899999999999999999999986
No 257
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2e-37 Score=345.43 Aligned_cols=256 Identities=22% Similarity=0.276 Sum_probs=198.4
Q ss_pred hcCCCCCCeeeeecCceEEEEEEc---CCCEEEEEEEEecCC----CcchHHHHHHHHHHHhc-CCCcceeEEeeeeccc
Q 039533 625 TSGFSSANLVGVGSFGSVYKGIID---EGRTTIAVKVFNLQH----HGASRSFIAECKALKSI-RHRNLVKVLTACLGAD 696 (949)
Q Consensus 625 ~~~y~~~~~lg~G~~g~Vy~~~~~---~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~ 696 (949)
.++|.+.+.||+|+||.||+|++. .+++.||||+++... ....+.+.+|+++++++ +||||+++++++...+
T Consensus 53 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 132 (355)
T 1vzo_A 53 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTET 132 (355)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETT
T ss_pred ccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCc
Confidence 467999999999999999999984 478999999986432 12345677899999999 6999999999876544
Q ss_pred ccCCccceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecC
Q 039533 697 YRGNDFKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDD 776 (949)
Q Consensus 697 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~ 776 (949)
..++||||+++++|.+++. ....+++..+..++.|++.||+|||++ +|+||||||+||+++.
T Consensus 133 -----~~~lv~e~~~~~~L~~~l~----------~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~ 194 (355)
T 1vzo_A 133 -----KLHLILDYINGGELFTHLS----------QRERFTEHEVQIYVGEIVLALEHLHKL---GIIYRDIKLENILLDS 194 (355)
T ss_dssp -----EEEEEECCCCSCBHHHHHH----------HHSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECT
T ss_pred -----eEEEEeecCCCCCHHHHHH----------HcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECC
Confidence 7899999999999999996 234589999999999999999999987 8999999999999999
Q ss_pred CCceEEeecccceecCCCCCccccccccCccCccCccccCCC--ccCCccchHHHHHHHHHHHhCCCCCccccccCchhh
Q 039533 777 YMTARVGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGC--EVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLH 854 (949)
Q Consensus 777 ~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~ 854 (949)
++.+||+|||+++......... .....||+.|+|||++.+. .++.++|||||||++|||++|+.||........ ..
T Consensus 195 ~~~~kl~DfG~a~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~-~~ 272 (355)
T 1vzo_A 195 NGHVVLTDFGLSKEFVADETER-AYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNS-QA 272 (355)
T ss_dssp TSCEEESCSSEEEECCGGGGGG-GCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCC-HH
T ss_pred CCcEEEeeCCCCeecccCCCCc-ccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccch-HH
Confidence 9999999999998765433222 2245699999999998863 478999999999999999999999964321111 00
Q ss_pred hhccccCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCC-----CHHHHHHHH
Q 039533 855 NFGRKALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRT-----NMTNVVHEL 928 (949)
Q Consensus 855 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----s~~ev~~~L 928 (949)
.... .+... ....+ .+.+..+.+++.+|++.||++|| +++|+++..
T Consensus 273 ~~~~--------~~~~~-~~~~~-------------------~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h~ 323 (355)
T 1vzo_A 273 EISR--------RILKS-EPPYP-------------------QEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHL 323 (355)
T ss_dssp HHHH--------HHHHC-CCCCC-------------------TTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSG
T ss_pred HHHH--------HHhcc-CCCCC-------------------cccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcCc
Confidence 0000 00000 00000 12344678999999999999999 999998643
No 258
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00 E-value=4.6e-37 Score=342.32 Aligned_cols=271 Identities=16% Similarity=0.186 Sum_probs=201.4
Q ss_pred hcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCCcc---h--------------HHHHHHHHHHHhcCCCccee
Q 039533 625 TSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHGA---S--------------RSFIAECKALKSIRHRNLVK 687 (949)
Q Consensus 625 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~---~--------------~~~~~E~~~l~~l~h~niv~ 687 (949)
.++|++.+.||+|+||.||+|++ +++.||||++....... . +.+.+|++++++++||||++
T Consensus 30 ~~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~ 107 (348)
T 2pml_X 30 INDYRIIRTLNQGKFNKIILCEK--DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLT 107 (348)
T ss_dssp ETTEEEEEEEECCSSCCEEEEEE--TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCC
T ss_pred cCceEEEEEEcCCCCeEEEEEEc--CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcce
Confidence 46899999999999999999999 78999999997432111 1 78999999999999999999
Q ss_pred EEeeeecccccCCccceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhh-CCCCCeEecC
Q 039533 688 VLTACLGADYRGNDFKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHH-DCQPVTAHCD 766 (949)
Q Consensus 688 ~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~-~~~~~ivHrD 766 (949)
+++++...+ ..++||||+++++|.+++....... ......+++..+..++.|++.||+|||+ + +|+|||
T Consensus 108 ~~~~~~~~~-----~~~lv~e~~~~~~L~~~~~~~~~l~--~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---~i~H~d 177 (348)
T 2pml_X 108 CEGIITNYD-----EVYIIYEYMENDSILKFDEYFFVLD--KNYTCFIPIQVIKCIIKSVLNSFSYIHNEK---NICHRD 177 (348)
T ss_dssp CSEEEESSS-----EEEEEEECCTTCBSSEESSSEESSC--SSSCCCCCHHHHHHHHHHHHHHHHHHHHTS---CEECCC
T ss_pred EEEEEeeCC-----eEEEEEeccCCCcHHHHHHHhhhhh--hccccCCCHHHHHHHHHHHHHHHHHHhccC---CEeecC
Confidence 999976544 7899999999999999943110000 0124568999999999999999999998 6 999999
Q ss_pred CCCCCeeecCCCceEEeecccceecCCCCCccccccccCccCccCccccCCC-ccCC-ccchHHHHHHHHHHHhCCCCCc
Q 039533 767 LKPSNVLLDDYMTARVGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGC-EVST-NGDVYSYGILLLELVIGKKPID 844 (949)
Q Consensus 767 lkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~-~sDiwSlGvvl~elltg~~Pf~ 844 (949)
|||+||+++.++.+||+|||.+....... .....||..|+|||++.+. .++. ++|||||||++|||++|+.||.
T Consensus 178 l~p~Nil~~~~~~~kl~dfg~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~ 253 (348)
T 2pml_X 178 VKPSNILMDKNGRVKLSDFGESEYMVDKK----IKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFS 253 (348)
T ss_dssp CCGGGEEECTTSCEEECCCTTCEECBTTE----ECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSC
T ss_pred CChHhEEEcCCCcEEEecccccccccccc----ccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCC
Confidence 99999999999999999999998764431 1235699999999999887 6665 9999999999999999999997
Q ss_pred cccccCchhhhhccc--cCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHH
Q 039533 845 IMFEGDINLHNFGRK--ALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMT 922 (949)
Q Consensus 845 ~~~~~~~~~~~~~~~--~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ 922 (949)
............... ..+........+.... . ........+..+.+++.+|++.||++|||++
T Consensus 254 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~-~--------------~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~ 318 (348)
T 2pml_X 254 LKISLVELFNNIRTKNIEYPLDRNHFLYPLTNK-K--------------STCSNNFLSNEDIDFLKLFLRKNPAERITSE 318 (348)
T ss_dssp CSSCSHHHHHHHTSCCCCCCCSSSSSTTTTCC-----------------------CCCHHHHHHHHHHCCSSGGGSCCHH
T ss_pred CCCcHHHHHHHHhccCcCCccchhhhhcccccc-c--------------cccchhhcCHHHHHHHHHHccCChhhCCCHH
Confidence 443211111111111 0110000000000000 0 0000123356788999999999999999999
Q ss_pred HHHH
Q 039533 923 NVVH 926 (949)
Q Consensus 923 ev~~ 926 (949)
|+++
T Consensus 319 e~l~ 322 (348)
T 2pml_X 319 DALK 322 (348)
T ss_dssp HHHT
T ss_pred HHhc
Confidence 9976
No 259
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00 E-value=1e-36 Score=346.17 Aligned_cols=283 Identities=19% Similarity=0.230 Sum_probs=201.5
Q ss_pred cCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCCcchHHHHHHHHHHHhcC--------CCcceeEEeeeecccc
Q 039533 626 SGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHGASRSFIAECKALKSIR--------HRNLVKVLTACLGADY 697 (949)
Q Consensus 626 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~--------h~niv~~~~~~~~~~~ 697 (949)
++|++.+.||+|+||+||+|++..+++.||||+++.. ....+.+.+|++++++++ |+||+++++++....
T Consensus 37 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~- 114 (397)
T 1wak_A 37 GRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA-EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISG- 114 (397)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEE-
T ss_pred CeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecC-CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecC-
Confidence 6799999999999999999999989999999999643 233467889999999995 788999999876332
Q ss_pred cCCccceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCC
Q 039533 698 RGNDFKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDY 777 (949)
Q Consensus 698 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~ 777 (949)
......++||||+ ++++.+++.. .....+++..++.|+.||+.||+|||+++ +|+||||||+|||++.+
T Consensus 115 ~~~~~~~lv~e~~-~~~l~~~~~~--------~~~~~~~~~~~~~i~~qi~~aL~~lH~~~--givHrDikp~NIll~~~ 183 (397)
T 1wak_A 115 VNGTHICMVFEVL-GHHLLKWIIK--------SNYQGLPLPCVKKIIQQVLQGLDYLHTKC--RIIHTDIKPENILLSVN 183 (397)
T ss_dssp TTEEEEEEEECCC-CCBHHHHHHH--------TTTSCCCHHHHHHHHHHHHHHHHHHHHTT--CEECCCCSGGGEEECCC
T ss_pred CCCceEEEEEecc-CccHHHHHHh--------cccCCCCHHHHHHHHHHHHHHHHHHHHhC--CEecCCCCHHHeeEecc
Confidence 1234789999999 5566666541 12245899999999999999999999753 89999999999999977
Q ss_pred C-------------------------------------------------ceEEeecccceecCCCCCccccccccCccC
Q 039533 778 M-------------------------------------------------TARVGDFGLARILSPDHTQTSSFSVKGSLG 808 (949)
Q Consensus 778 ~-------------------------------------------------~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~ 808 (949)
+ .+||+|||.|+....... ...||..
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~~~-----~~~gt~~ 258 (397)
T 1wak_A 184 EQYIRRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKHFT-----EDIQTRQ 258 (397)
T ss_dssp HHHHHHHHHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBCSC-----SCCSCGG
T ss_pred chhhhhhhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEeccccccccccccCc-----cCCCCCc
Confidence 5 799999999987654322 3458999
Q ss_pred ccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccccccCch----hhhhc---cccCCCch-------hhhcccCCC
Q 039533 809 YIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDIN----LHNFG---RKALPDDV-------MDIVDSSLL 874 (949)
Q Consensus 809 y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~----~~~~~---~~~~~~~~-------~~~~d~~l~ 874 (949)
|+|||++.+..++.++|||||||++|||++|+.||......... ..... ....+... .+.+.....
T Consensus 259 y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~ 338 (397)
T 1wak_A 259 YRSLEVLIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGD 338 (397)
T ss_dssp GCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSS
T ss_pred ccCChhhcCCCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCccc
Confidence 99999999999999999999999999999999999754322110 00000 00000000 000000000
Q ss_pred -CCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 039533 875 -PDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVH 926 (949)
Q Consensus 875 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 926 (949)
....+.............+....+.+..+.+++.+||+.||++|||++|+++
T Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 391 (397)
T 1wak_A 339 LKHITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLR 391 (397)
T ss_dssp BSSCCCCCCCCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHT
T ss_pred cccccccCCcchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhh
Confidence 0000000000000000111122466778999999999999999999999985
No 260
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00 E-value=1.4e-36 Score=346.91 Aligned_cols=199 Identities=25% Similarity=0.307 Sum_probs=170.7
Q ss_pred hcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCCcchHHHHHHHHHHHhc------CCCcceeEEeeeeccccc
Q 039533 625 TSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHGASRSFIAECKALKSI------RHRNLVKVLTACLGADYR 698 (949)
Q Consensus 625 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l------~h~niv~~~~~~~~~~~~ 698 (949)
..+|++.+.||+|+||.||+|.+..+++.||||+++... ...+.+.+|+++++.+ .|+||+++++++....
T Consensus 96 ~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~-- 172 (429)
T 3kvw_A 96 AYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEK-RFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRN-- 172 (429)
T ss_dssp TTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETT--
T ss_pred cCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCcc-chHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCC--
Confidence 457999999999999999999999899999999996432 2345677888888887 5779999999976544
Q ss_pred CCccceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCC
Q 039533 699 GNDFKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYM 778 (949)
Q Consensus 699 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~ 778 (949)
..++||||+. ++|.+++... ....+++..+..|+.||+.||+|||++ +|+||||||+|||++.++
T Consensus 173 ---~~~lv~e~~~-~~L~~~l~~~--------~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NILl~~~~ 237 (429)
T 3kvw_A 173 ---HICMTFELLS-MNLYELIKKN--------KFQGFSLPLVRKFAHSILQCLDALHKN---RIIHCDLKPENILLKQQG 237 (429)
T ss_dssp ---EEEEEECCCC-CBHHHHHHHT--------TTCCCCHHHHHHHHHHHHHHHHHHHHH---TEECSCCSGGGEEESSTT
T ss_pred ---eEEEEEeccC-CCHHHHHHhc--------cCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEccCC
Confidence 7899999996 6999988621 223489999999999999999999988 899999999999999988
Q ss_pred c--eEEeecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccc
Q 039533 779 T--ARVGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIM 846 (949)
Q Consensus 779 ~--~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~ 846 (949)
. +||+|||+|+....... ...||+.|+|||++.+..++.++|||||||++|||++|++||...
T Consensus 238 ~~~vkL~DFG~a~~~~~~~~-----~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~ 302 (429)
T 3kvw_A 238 RSGIKVIDFGSSCYEHQRVY-----TYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGE 302 (429)
T ss_dssp SCCEEECCCTTCEETTCCCC-----SSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred CcceEEeecccceecCCccc-----ccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCC
Confidence 7 99999999987543322 345899999999999999999999999999999999999999644
No 261
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=100.00 E-value=6.4e-37 Score=341.67 Aligned_cols=279 Identities=19% Similarity=0.186 Sum_probs=196.8
Q ss_pred hcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCC--cchHHHHHHHHHHHhcCCCcceeEEeeeecccc-cCCc
Q 039533 625 TSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHH--GASRSFIAECKALKSIRHRNLVKVLTACLGADY-RGND 701 (949)
Q Consensus 625 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~-~~~~ 701 (949)
.++|.+.+.||+|+||.||+|++..+++.||||++..... ...+++.+|+.++++++||||+++++++..... ....
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 102 (353)
T 3coi_A 23 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY 102 (353)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred CceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccce
Confidence 3578899999999999999999998999999999975432 234678899999999999999999999865431 1122
Q ss_pred cceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceE
Q 039533 702 FKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTAR 781 (949)
Q Consensus 702 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~k 781 (949)
..++||||++ ++|.+++. ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+|
T Consensus 103 ~~~lv~e~~~-~~l~~~~~------------~~~~~~~~~~i~~qi~~al~~LH~~---~ivH~dlkp~NIl~~~~~~~k 166 (353)
T 3coi_A 103 DFYLVMPFMQ-TDLQKIMG------------LKFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELK 166 (353)
T ss_dssp CCEEEEECCS-EEGGGTTT------------SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTCCEE
T ss_pred eEEEEecccc-CCHHHHhc------------CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEeECCCCcEE
Confidence 4599999997 58888774 2388999999999999999999988 999999999999999999999
Q ss_pred EeecccceecCCCCCccccccccCccCccCccccCC-CccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhcccc
Q 039533 782 VGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVG-CEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKA 860 (949)
Q Consensus 782 l~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~ 860 (949)
|+|||.++...... ....||+.|+|||++.+ ..++.++|||||||++|||++|+.||......+ .+..... .
T Consensus 167 l~Dfg~~~~~~~~~-----~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~-~~~~i~~-~ 239 (353)
T 3coi_A 167 ILDFGLARHADAEM-----TGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLD-QLTQILK-V 239 (353)
T ss_dssp ECSTTCTTC-------------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHH-HHHHHHH-H
T ss_pred EeecccccCCCCCc-----cccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHH-H
Confidence 99999998654322 13458999999999877 678999999999999999999999996432111 0000000 0
Q ss_pred CCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 039533 861 LPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVH 926 (949)
Q Consensus 861 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 926 (949)
......+.............+..................+..+.+++.+|++.||++|||++|+++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~ 305 (353)
T 3coi_A 240 TGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALT 305 (353)
T ss_dssp HCBCCHHHHTTCSCHHHHHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred hCCCCHHHHHHHhhHHHHHHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 000000000000000000000000000000000001134567899999999999999999999985
No 262
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00 E-value=1e-36 Score=347.22 Aligned_cols=275 Identities=19% Similarity=0.232 Sum_probs=195.4
Q ss_pred cCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCCcchHHHHHHHHHHHhcCCCcceeEEeeeecccc-cCCccce
Q 039533 626 SGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHGASRSFIAECKALKSIRHRNLVKVLTACLGADY-RGNDFKA 704 (949)
Q Consensus 626 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~-~~~~~~~ 704 (949)
.+|++.+.||+|+||.||+|++..+++.||||++..... ...+|++++++++||||+++++++..... .+....+
T Consensus 54 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~~----~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~ 129 (420)
T 1j1b_A 54 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR----FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLN 129 (420)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCTT----SCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEE
T ss_pred ceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccch----hHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEE
Confidence 358888999999999999999998899999999864332 23479999999999999999999865432 1233467
Q ss_pred eEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCC-CceEEe
Q 039533 705 SVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDY-MTARVG 783 (949)
Q Consensus 705 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~-~~~kl~ 783 (949)
+||||+++ ++.+.+... ......+++..+..++.||++||+|||++ +|+||||||+|||++.+ +.+||+
T Consensus 130 lv~e~~~~-~l~~~~~~~------~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NILl~~~~~~~kl~ 199 (420)
T 1j1b_A 130 LVLDYVPE-TVYRVARHY------SRAKQTLPVIYVKLYMYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLC 199 (420)
T ss_dssp EEEECCCE-EHHHHHHHH------HHTTCCCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEEETTTTEEEEC
T ss_pred eehhcccc-cHHHHHHHH------hhccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChhhEEEeCCCCeEEec
Confidence 89999986 666655411 11345689999999999999999999977 99999999999999955 678999
Q ss_pred ecccceecCCCCCccccccccCccCccCccccCCC-ccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhccccCC
Q 039533 784 DFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGC-EVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKALP 862 (949)
Q Consensus 784 DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~ 862 (949)
|||+++......... ...||+.|+|||++.+. .++.++|||||||++|||++|+.||......+ .+.......-.
T Consensus 200 DFG~a~~~~~~~~~~---~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~-~l~~i~~~lg~ 275 (420)
T 1j1b_A 200 DFGSAKQLVRGEPNV---SYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVD-QLVEIIKVLGT 275 (420)
T ss_dssp CCTTCEECCTTCCCC---SCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHHHCS
T ss_pred cchhhhhcccCCCce---eeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHhCC
Confidence 999999765443322 34689999999998765 78999999999999999999999996432211 11111110000
Q ss_pred ---CchhhhcccCCCCCchhhhhhhchhhhhhhhhh--HHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 039533 863 ---DDVMDIVDSSLLPDDEDLILTGNQRQKQARINS--IIECLISMVRIGVACSMELPQDRTNMTNVVH 926 (949)
Q Consensus 863 ---~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 926 (949)
+.+.+. ++....... ... ....+.. ....+..+.+++.+|++.||++|||+.|+++
T Consensus 276 p~~~~~~~~-~~~~~~~~~------p~~-~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~ 336 (420)
T 1j1b_A 276 PTREQIREM-NPNYTEFKF------PQI-KAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACA 336 (420)
T ss_dssp CCHHHHHHH-CSCCCCCCC------CCC-CCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred CCHHHHHhh-Chhhhhhcc------Ccc-CCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhC
Confidence 001110 000000000 000 0000000 0123456889999999999999999999985
No 263
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=100.00 E-value=7.7e-37 Score=330.58 Aligned_cols=252 Identities=23% Similarity=0.267 Sum_probs=199.9
Q ss_pred HhcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCC--CcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCc
Q 039533 624 ATSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQH--HGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGND 701 (949)
Q Consensus 624 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 701 (949)
..++|++.+.||+|+||.||+|++..+++.||+|++.... ....+.+.+|++++++++||||+++++++....
T Consensus 20 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~----- 94 (287)
T 2wei_A 20 FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSS----- 94 (287)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSS-----
T ss_pred HhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCC-----
Confidence 3468999999999999999999998889999999997543 234578899999999999999999999976544
Q ss_pred cceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCC---C
Q 039533 702 FKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDY---M 778 (949)
Q Consensus 702 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~---~ 778 (949)
..++||||+++++|.+++. ....+++.++..++.|++.||+|||++ +|+||||||+||+++.+ +
T Consensus 95 ~~~lv~e~~~~~~L~~~l~----------~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIlv~~~~~~~ 161 (287)
T 2wei_A 95 SFYIVGELYTGGELFDEII----------KRKRFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDC 161 (287)
T ss_dssp EEEEEECCCCSCBHHHHHH----------HHSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTC
T ss_pred eEEEEEEccCCCCHHHHHH----------hcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCChhhEEEecCCCcc
Confidence 7899999999999999885 234589999999999999999999987 99999999999999754 4
Q ss_pred ceEEeecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhcc
Q 039533 779 TARVGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGR 858 (949)
Q Consensus 779 ~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~ 858 (949)
.+||+|||++.......... ...||+.|+|||++.+ .++.++||||||+++|+|++|+.||....... ...
T Consensus 162 ~~kL~Dfg~~~~~~~~~~~~---~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~--~~~--- 232 (287)
T 2wei_A 162 DIKIIDFGLSTCFQQNTKMK---DRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYD--ILK--- 232 (287)
T ss_dssp CEEECSTTGGGTBCCCSSCS---CHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH--HHH---
T ss_pred cEEEeccCcceeecCCCccc---cccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCCCCHHH--HHH---
Confidence 79999999998765443221 2348899999999876 48999999999999999999999996432111 000
Q ss_pred ccCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 039533 859 KALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVH 926 (949)
Q Consensus 859 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 926 (949)
.+......... +.....+..+.+++.+|++.||++|||+.|+++
T Consensus 233 --------~~~~~~~~~~~----------------~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 276 (287)
T 2wei_A 233 --------RVETGKYAFDL----------------PQWRTISDDAKDLIRKMLTFHPSLRITATQCLE 276 (287)
T ss_dssp --------HHHHCCCCCCS----------------GGGTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred --------HHHcCCCCCCc----------------hhhhhcCHHHHHHHHHHcccChhhCcCHHHHhc
Confidence 00000000000 001123456889999999999999999999987
No 264
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00 E-value=4.7e-36 Score=330.90 Aligned_cols=276 Identities=23% Similarity=0.299 Sum_probs=202.4
Q ss_pred HHhcCCCCCCeeeeecCceEEEEEEc-CCCEEEEEEEEecCCC--cchHHHHHHHHHHHhc---CCCcceeEEeeeeccc
Q 039533 623 NATSGFSSANLVGVGSFGSVYKGIID-EGRTTIAVKVFNLQHH--GASRSFIAECKALKSI---RHRNLVKVLTACLGAD 696 (949)
Q Consensus 623 ~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l---~h~niv~~~~~~~~~~ 696 (949)
.+.++|++.+.||+|+||.||+|++. .+++.||+|+++.... .....+.+|+.+++++ +||||+++++++....
T Consensus 8 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~ 87 (326)
T 1blx_A 8 RADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSR 87 (326)
T ss_dssp CGGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEE
T ss_pred CchhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecc
Confidence 34578999999999999999999994 6789999999974332 2234567788877776 8999999999987443
Q ss_pred ccCCccceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecC
Q 039533 697 YRGNDFKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDD 776 (949)
Q Consensus 697 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~ 776 (949)
.......++||||++ |+|.+++... ....+++..+..++.|++.||+|||++ +|+||||||+||+++.
T Consensus 88 ~~~~~~~~lv~e~~~-~~L~~~l~~~--------~~~~~~~~~~~~~~~qi~~~l~~lH~~---gi~H~dlkp~Nili~~ 155 (326)
T 1blx_A 88 TDRETKLTLVFEHVD-QDLTTYLDKV--------PEPGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTS 155 (326)
T ss_dssp CSSEEEEEEEEECCS-CBHHHHHHHS--------CTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECT
T ss_pred cCCCceEEEEEecCC-CCHHHHHHhc--------ccCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCCHHHeEEcC
Confidence 334457899999998 6999998622 123489999999999999999999987 9999999999999999
Q ss_pred CCceEEeecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhh
Q 039533 777 YMTARVGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNF 856 (949)
Q Consensus 777 ~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~ 856 (949)
++.+||+|||.++....... .....||..|+|||++.+..++.++|||||||++|||++|+.||........ ....
T Consensus 156 ~~~~kl~Dfg~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~-~~~i 231 (326)
T 1blx_A 156 SGQIKLADFGLARIYSFQMA---LTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQ-LGKI 231 (326)
T ss_dssp TCCEEECSCCSCCCCCGGGG---GCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH-HHHH
T ss_pred CCCEEEecCcccccccCCCC---ccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHH-HHHH
Confidence 99999999999986543221 2245689999999999998999999999999999999999999964422110 0000
Q ss_pred cc-------ccCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 039533 857 GR-------KALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVH 926 (949)
Q Consensus 857 ~~-------~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 926 (949)
.. ..++.... ..+........ ... .......+..+.+++.+|++.||++|||+.|+++
T Consensus 232 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~---------~~~--~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 296 (326)
T 1blx_A 232 LDVIGLPGEEDWPRDVA-LPRQAFHSKSA---------QPI--EKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 296 (326)
T ss_dssp HHHHCCCCGGGSCTTCS-SCGGGSCCCCC---------CCG--GGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred HHHcCCCCcccCccccc-cchhhhcccCc---------chh--hhccccCCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 00 00000000 00000000000 000 0001133456789999999999999999999985
No 265
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00 E-value=2.1e-36 Score=341.83 Aligned_cols=269 Identities=21% Similarity=0.246 Sum_probs=192.5
Q ss_pred cCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCCcchHHHHHHHHHHHhcCCCcceeEEeeeecccc-cCCccce
Q 039533 626 SGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHGASRSFIAECKALKSIRHRNLVKVLTACLGADY-RGNDFKA 704 (949)
Q Consensus 626 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~-~~~~~~~ 704 (949)
.+|++.+.||+|+||.||+|++..+++ ||+|++...... ..+|++++++++||||+++++++..... .+....+
T Consensus 40 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~-~aikk~~~~~~~----~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~ 114 (394)
T 4e7w_A 40 IAYTNCKVIGNGSFGVVFQAKLVESDE-VAIKKVLQDKRF----KNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLN 114 (394)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTEE-EEEEEEECCTTS----CCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEE
T ss_pred ceEEEeEEEeeCCCeEEEEEEECCCCe-EEEEEEecCcch----HHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEE
Confidence 468889999999999999999985554 888887543322 2369999999999999999999865442 2333478
Q ss_pred eEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeec-CCCceEEe
Q 039533 705 SVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLD-DYMTARVG 783 (949)
Q Consensus 705 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~-~~~~~kl~ 783 (949)
+||||++++.+...... ......+++..+..++.|+++||+|||++ +|+||||||+||+++ .++.+||+
T Consensus 115 lv~e~~~~~l~~~~~~~-------~~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~kL~ 184 (394)
T 4e7w_A 115 LVLEYVPETVYRASRHY-------AKLKQTMPMLLIKLYMYQLLRSLAYIHSI---GICHRDIKPQNLLLDPPSGVLKLI 184 (394)
T ss_dssp EEEECCSEEHHHHHHHH-------HHTTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEEC
T ss_pred EEeeccCccHHHHHHHH-------HhhcCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEcCCCCcEEEe
Confidence 99999987544333210 11235689999999999999999999987 999999999999999 79999999
Q ss_pred ecccceecCCCCCccccccccCccCccCccccCCC-ccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhccccC-
Q 039533 784 DFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGC-EVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKAL- 861 (949)
Q Consensus 784 DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~- 861 (949)
|||+|+......... ...||+.|+|||++.+. .++.++||||+||++|||++|+.||......+ .+.......-
T Consensus 185 DFG~a~~~~~~~~~~---~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~-~l~~i~~~~g~ 260 (394)
T 4e7w_A 185 DFGSAKILIAGEPNV---SYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGID-QLVEIIKVLGT 260 (394)
T ss_dssp CCTTCEECCTTCCCC---SSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHHHCC
T ss_pred eCCCcccccCCCCCc---ccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHhCC
Confidence 999998875443322 34689999999998765 58999999999999999999999996432211 1111111000
Q ss_pred CC--chhhh----cccC---CCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 039533 862 PD--DVMDI----VDSS---LLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVH 926 (949)
Q Consensus 862 ~~--~~~~~----~d~~---l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 926 (949)
+. .+... .+.. ....+. .. ......+..+.+++.+|++.||++|||+.|+++
T Consensus 261 p~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~--~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 321 (394)
T 4e7w_A 261 PSREQIKTMNPNYMEHKFPQIRPHPF-----------SK--VFRPRTPPDAIDLISRLLEYTPSARLTAIEALC 321 (394)
T ss_dssp CCHHHHHHHCGGGSSSCCCCCCCCCH-----------HH--HSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred CCHHHHHhhChhhhhhccccccCCcH-----------HH--hccccCCHHHHHHHHHHhCCChhhCCCHHHHhc
Confidence 00 00000 0000 000000 00 000123457899999999999999999999986
No 266
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=100.00 E-value=3.2e-37 Score=339.12 Aligned_cols=263 Identities=22% Similarity=0.293 Sum_probs=195.5
Q ss_pred HhcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCC--CcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCc
Q 039533 624 ATSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQH--HGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGND 701 (949)
Q Consensus 624 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 701 (949)
..++|++.+.||+|+||.||+|++.. .||+|+++... ....+.+.+|+.++++++||||+++++++...+
T Consensus 31 ~~~~~~~~~~lg~G~~g~V~~~~~~~---~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~----- 102 (319)
T 2y4i_B 31 PFEQLEIGELIGKGRFGQVYHGRWHG---EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPP----- 102 (319)
T ss_dssp CCSCEECCCBCCCSSSSEEEEEEESS---SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSS-----
T ss_pred CHHHeEEeeEeccCCceEEEEEEEcC---eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCC-----
Confidence 45789999999999999999999863 49999987443 223356788999999999999999999986544
Q ss_pred cceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceE
Q 039533 702 FKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTAR 781 (949)
Q Consensus 702 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~k 781 (949)
..++||||+++++|.+++.. ....+++.++..++.|++.||+|||++ +|+||||||+||+++ ++.+|
T Consensus 103 ~~~iv~e~~~~~~L~~~l~~---------~~~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dlkp~NIl~~-~~~~~ 169 (319)
T 2y4i_B 103 HLAIITSLCKGRTLYSVVRD---------AKIVLDVNKTRQIAQEIVKGMGYLHAK---GILHKDLKSKNVFYD-NGKVV 169 (319)
T ss_dssp CEEEECBCCCSEEHHHHTTS---------SCCCCCSHHHHHHHHHHHHHHHHHHHT---TCCCCCCCSTTEEEC---CCE
T ss_pred ceEEEeecccCCcHHHHHHh---------cCCCCCHHHHHHHHHHHHHHHHHHHhC---CccccCCChhhEEEe-CCCEE
Confidence 78999999999999999972 234588999999999999999999988 999999999999998 67999
Q ss_pred EeecccceecCCCCC---ccccccccCccCccCccccCC---------CccCCccchHHHHHHHHHHHhCCCCCcccccc
Q 039533 782 VGDFGLARILSPDHT---QTSSFSVKGSLGYIAPEYGVG---------CEVSTNGDVYSYGILLLELVIGKKPIDIMFEG 849 (949)
Q Consensus 782 l~DfG~a~~~~~~~~---~~~~~~~~gt~~y~aPE~~~~---------~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~ 849 (949)
|+|||+++....... ........||+.|+|||++.+ ..++.++|||||||++|||++|+.||......
T Consensus 170 l~Dfg~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~ 249 (319)
T 2y4i_B 170 ITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAE 249 (319)
T ss_dssp ECCCSCCC----------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHH
T ss_pred EeecCCccccccccccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH
Confidence 999999876532211 111123458999999999864 35788999999999999999999999643221
Q ss_pred CchhhhhccccCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHH
Q 039533 850 DINLHNFGRKALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHELQ 929 (949)
Q Consensus 850 ~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~ 929 (949)
. ........ ..+.... ...+..+.+++.+||+.||++|||+.|+++.|+
T Consensus 250 ~--~~~~~~~~--------~~~~~~~---------------------~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~ 298 (319)
T 2y4i_B 250 A--IIWQMGTG--------MKPNLSQ---------------------IGMGKEISDILLFCWAFEQEERPTFTKLMDMLE 298 (319)
T ss_dssp H--HHHHHHTT--------CCCCCCC---------------------SSCCTTHHHHHHHHHCSSTTTSCCHHHHHHHHT
T ss_pred H--HHHHhccC--------CCCCCCc---------------------CCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHH
Confidence 1 00000000 0000000 012334788999999999999999999999999
Q ss_pred HhHHhhccC
Q 039533 930 SIKNILLGV 938 (949)
Q Consensus 930 ~i~~~~~~~ 938 (949)
++.+.....
T Consensus 299 ~l~~~~~~~ 307 (319)
T 2y4i_B 299 KLPKRNRRL 307 (319)
T ss_dssp TC-------
T ss_pred HHHHhhccC
Confidence 998775443
No 267
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00 E-value=2.7e-36 Score=334.73 Aligned_cols=279 Identities=19% Similarity=0.213 Sum_probs=200.4
Q ss_pred hcCCCCCCeeeeecCceEEEEEE-cCCCEEEEEEEEecCCCcchHHHHHHHHHHHhcCCCc------ceeEEeeeecccc
Q 039533 625 TSGFSSANLVGVGSFGSVYKGII-DEGRTTIAVKVFNLQHHGASRSFIAECKALKSIRHRN------LVKVLTACLGADY 697 (949)
Q Consensus 625 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n------iv~~~~~~~~~~~ 697 (949)
.++|++.+.||+|+||.||+|.+ ..+++.||||+++... ...+.+.+|++++++++|++ ++++++++...+
T Consensus 13 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~- 90 (339)
T 1z57_A 13 SARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVD-RYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHG- 90 (339)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSSH-HHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETT-
T ss_pred cCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecCC-chhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCC-
Confidence 35899999999999999999998 5578999999986432 33467889999999987654 999999976544
Q ss_pred cCCccceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecC-
Q 039533 698 RGNDFKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDD- 776 (949)
Q Consensus 698 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~- 776 (949)
..++||||+ +++|.+++... ....+++.++..++.|++.||+|||++ +|+||||||+||+++.
T Consensus 91 ----~~~lv~e~~-~~~l~~~l~~~--------~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~ 154 (339)
T 1z57_A 91 ----HICIVFELL-GLSTYDFIKEN--------GFLPFRLDHIRKMAYQICKSVNFLHSN---KLTHTDLKPENILFVQS 154 (339)
T ss_dssp ----EEEEEEECC-CCBHHHHHHHT--------TTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCC
T ss_pred ----cEEEEEcCC-CCCHHHHHHhc--------CCCCCcHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHEEEecc
Confidence 789999999 88999998621 223588999999999999999999987 9999999999999987
Q ss_pred ------------------CCceEEeecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHh
Q 039533 777 ------------------YMTARVGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVI 838 (949)
Q Consensus 777 ------------------~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~ellt 838 (949)
++.+||+|||.++....... ...||+.|+|||++.+..++.++|||||||++|||++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~~-----~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~ 229 (339)
T 1z57_A 155 DYTEAYNPKIKRDERTLINPDIKVVDFGSATYDDEHHS-----TLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYL 229 (339)
T ss_dssp CEEEEEC----CEEEEESCCCEEECCCSSCEETTSCCC-----SSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHH
T ss_pred ccccccCCccccccccccCCCceEeeCcccccCccccc-----cccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHh
Confidence 67899999999987544322 3458999999999999899999999999999999999
Q ss_pred CCCCCccccccCc-hhhhhccccCCCchhhhcc---------cCCCCCch-hhhhhhchhhhhhhhhhHHHHHHHHHHHh
Q 039533 839 GKKPIDIMFEGDI-NLHNFGRKALPDDVMDIVD---------SSLLPDDE-DLILTGNQRQKQARINSIIECLISMVRIG 907 (949)
Q Consensus 839 g~~Pf~~~~~~~~-~~~~~~~~~~~~~~~~~~d---------~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~l~ 907 (949)
|+.||......+. ..........+........ ........ ....................++..+.+++
T Consensus 230 g~~pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 309 (339)
T 1z57_A 230 GFTVFPTHDSKEHLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLI 309 (339)
T ss_dssp SSCSCCCSCHHHHHHHHHHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHH
T ss_pred CCCCCCCCChHHHHHHHHHHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHH
Confidence 9999964322110 0000000111111000000 00000000 00000000000000111124567899999
Q ss_pred hccccCCCCCCCCHHHHHH
Q 039533 908 VACSMELPQDRTNMTNVVH 926 (949)
Q Consensus 908 ~~cl~~dP~~RPs~~ev~~ 926 (949)
.+|++.||++|||++|+++
T Consensus 310 ~~~L~~dP~~Rpt~~ell~ 328 (339)
T 1z57_A 310 QKMLEYDPAKRITLREALK 328 (339)
T ss_dssp HHHTCSSTTTSCCHHHHTT
T ss_pred HHHhCcCcccccCHHHHhc
Confidence 9999999999999999985
No 268
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=100.00 E-value=1.5e-36 Score=334.93 Aligned_cols=259 Identities=22% Similarity=0.240 Sum_probs=176.7
Q ss_pred hcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCC-cchHHHHHHHH-HHHhcCCCcceeEEeeeecccccCCcc
Q 039533 625 TSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHH-GASRSFIAECK-ALKSIRHRNLVKVLTACLGADYRGNDF 702 (949)
Q Consensus 625 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~-~l~~l~h~niv~~~~~~~~~~~~~~~~ 702 (949)
.++|.+.+.||+|+||.||+|.+..+++.||||+++.... ....++..|+. +++.++||||+++++++...+ .
T Consensus 21 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~-----~ 95 (327)
T 3aln_A 21 AEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREG-----D 95 (327)
T ss_dssp SCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSS-----E
T ss_pred HHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCC-----c
Confidence 3678999999999999999999998999999999975533 23345566666 677789999999999986544 7
Q ss_pred ceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEE
Q 039533 703 KASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARV 782 (949)
Q Consensus 703 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl 782 (949)
.++||||+++ +|.+++.... ......+++..+..++.|++.||.|||+.. +|+||||||+||+++.++.+||
T Consensus 96 ~~lv~e~~~~-~l~~~~~~~~-----~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~--~ivH~dlkp~NIll~~~~~~kl 167 (327)
T 3aln_A 96 CWICMELMST-SFDKFYKYVY-----SVLDDVIPEEILGKITLATVKALNHLKENL--KIIHRDIKPSNILLDRSGNIKL 167 (327)
T ss_dssp EEEEECCCSE-EHHHHHHHHH-----HTTCCCCCHHHHHHHHHHHHHHHHHHHHHH--SCCCSCCCGGGEEEETTTEEEE
T ss_pred eEEEEeecCC-ChHHHHHHHH-----hhhcccCcHHHHHHHHHHHHHHHHHHhccC--CEeECCCCHHHEEEcCCCCEEE
Confidence 8999999985 8877764110 012356899999999999999999999642 7999999999999999999999
Q ss_pred eecccceecCCCCCccccccccCccCccCcccc----CCCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhcc
Q 039533 783 GDFGLARILSPDHTQTSSFSVKGSLGYIAPEYG----VGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGR 858 (949)
Q Consensus 783 ~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~----~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~ 858 (949)
+|||+++......... ...||+.|+|||++ .+..++.++|||||||++|||++|+.||.............
T Consensus 168 ~Dfg~~~~~~~~~~~~---~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~-- 242 (327)
T 3aln_A 168 CDFGISGQLVDSIAKT---RDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQV-- 242 (327)
T ss_dssp CCCSSSCC---------------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC-------CCC--
T ss_pred ccCCCceecccccccc---cCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHHHHHHHH--
Confidence 9999998765433221 23589999999998 45678999999999999999999999996432111111000
Q ss_pred ccCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 039533 859 KALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVH 926 (949)
Q Consensus 859 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 926 (949)
...... .+.... ....+..+.+++.+||+.||++|||+.|+++
T Consensus 243 --~~~~~~-----~~~~~~------------------~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 285 (327)
T 3aln_A 243 --VKGDPP-----QLSNSE------------------EREFSPSFINFVNLCLTKDESKRPKYKELLK 285 (327)
T ss_dssp --CCSCCC-----CCCCCS------------------SCCCCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred --hcCCCC-----CCCCcc------------------cccCCHHHHHHHHHHhhCChhhCcCHHHHHh
Confidence 000000 000000 0022456889999999999999999999965
No 269
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=100.00 E-value=1.2e-36 Score=364.40 Aligned_cols=259 Identities=22% Similarity=0.345 Sum_probs=202.8
Q ss_pred hcCCCCCCeeeeecCceEEEEEEcC---CCEEEEEEEEecCCC-cchHHHHHHHHHHHhcCCCcceeEEeeeecccccCC
Q 039533 625 TSGFSSANLVGVGSFGSVYKGIIDE---GRTTIAVKVFNLQHH-GASRSFIAECKALKSIRHRNLVKVLTACLGADYRGN 700 (949)
Q Consensus 625 ~~~y~~~~~lg~G~~g~Vy~~~~~~---~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 700 (949)
.++|.+.+.||+|+||.||+|.+.. .+..||||+++.... ...+.+.+|+.++++++||||+++++++.+
T Consensus 389 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~------ 462 (656)
T 2j0j_A 389 RERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE------ 462 (656)
T ss_dssp GGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS------
T ss_pred cccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEec------
Confidence 4678889999999999999999853 356799999864332 234678999999999999999999998732
Q ss_pred ccceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCce
Q 039533 701 DFKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTA 780 (949)
Q Consensus 701 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~ 780 (949)
+..++||||+++|+|.+++.. ....+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+
T Consensus 463 ~~~~lv~E~~~~g~L~~~l~~---------~~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDikp~NILl~~~~~v 530 (656)
T 2j0j_A 463 NPVWIIMELCTLGELRSFLQV---------RKFSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCV 530 (656)
T ss_dssp SSCEEEEECCTTCBHHHHHHH---------TTTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEE
T ss_pred CceEEEEEcCCCCcHHHHHHh---------ccCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccchHhEEEeCCCCE
Confidence 257999999999999999962 234589999999999999999999987 99999999999999999999
Q ss_pred EEeecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHh-CCCCCccccccCchhhhhccc
Q 039533 781 RVGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVI-GKKPIDIMFEGDINLHNFGRK 859 (949)
Q Consensus 781 kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~ellt-g~~Pf~~~~~~~~~~~~~~~~ 859 (949)
||+|||+++.......... ....+|+.|+|||++.+..++.++|||||||++|||++ |..||......+ ....
T Consensus 531 kL~DFG~a~~~~~~~~~~~-~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~--~~~~--- 604 (656)
T 2j0j_A 531 KLGDFGLSRYMEDSTYYKA-SKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND--VIGR--- 604 (656)
T ss_dssp EECCCCCCCSCCC-----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH--HHHH---
T ss_pred EEEecCCCeecCCCcceec-cCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHHH--HHHH---
Confidence 9999999987654432221 23347789999999988889999999999999999997 999996432111 0000
Q ss_pred cCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHHhHHh
Q 039533 860 ALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHELQSIKNI 934 (949)
Q Consensus 860 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~~~ 934 (949)
+.+....+. ...++..+.+++.+||+.||++|||+.|+++.|+++.+.
T Consensus 605 --------i~~~~~~~~-------------------~~~~~~~l~~li~~~l~~dP~~RPs~~el~~~L~~il~~ 652 (656)
T 2j0j_A 605 --------IENGERLPM-------------------PPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEE 652 (656)
T ss_dssp --------HHHTCCCCC-------------------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred --------HHcCCCCCC-------------------CccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHH
Confidence 000000000 013345688999999999999999999999999998754
No 270
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=100.00 E-value=2.2e-36 Score=334.31 Aligned_cols=257 Identities=18% Similarity=0.200 Sum_probs=174.4
Q ss_pred hcCCCCCC-eeeeecCceEEEEEEcCCCEEEEEEEEecCCCcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCccc
Q 039533 625 TSGFSSAN-LVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFK 703 (949)
Q Consensus 625 ~~~y~~~~-~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 703 (949)
.++|.+.+ +||+|+||.||+|++..+++.||||++... ..........++.++||||+++++++.... .+....
T Consensus 27 ~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~----~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~-~~~~~~ 101 (336)
T 3fhr_A 27 TDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDS----PKARQEVDHHWQASGGPHIVCILDVYENMH-HGKRCL 101 (336)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESS----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEE-TTEEEE
T ss_pred cceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCc----HHHHHHHHHHHHhcCCCChHHHHHHHhhcc-CCCceE
Confidence 56788854 699999999999999989999999998642 122223333456679999999999986532 223468
Q ss_pred eeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecC---CCce
Q 039533 704 ASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDD---YMTA 780 (949)
Q Consensus 704 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~---~~~~ 780 (949)
++||||+++|+|.+++... ....+++.+++.++.|++.||+|||++ +|+||||||+||+++. ++.+
T Consensus 102 ~lv~e~~~gg~L~~~l~~~--------~~~~l~~~~~~~i~~ql~~~l~~LH~~---~ivH~dlkp~NIll~~~~~~~~~ 170 (336)
T 3fhr_A 102 LIIMECMEGGELFSRIQER--------GDQAFTEREAAEIMRDIGTAIQFLHSH---NIAHRDVKPENLLYTSKEKDAVL 170 (336)
T ss_dssp EEEEECCTTEEHHHHHHTC---------CCCCBHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCE
T ss_pred EEEEeccCCCCHHHHHHhc--------CCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEEecCCCceE
Confidence 9999999999999999731 224689999999999999999999988 9999999999999975 4569
Q ss_pred EEeecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhcccc
Q 039533 781 RVGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKA 860 (949)
Q Consensus 781 kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~ 860 (949)
||+|||+++........ ...||+.|+|||++.+..++.++|||||||++|||++|+.||..........
T Consensus 171 kl~Dfg~~~~~~~~~~~----~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~------- 239 (336)
T 3fhr_A 171 KLTDFGFAKETTQNALQ----TPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISP------- 239 (336)
T ss_dssp EECCCTTCEEC--------------------------CHHHHHHHHHHHHHHHHHHHHSSCCC-----------------
T ss_pred EEeccccceeccccccc----cCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhh-------
Confidence 99999999876543221 3458999999999988899999999999999999999999996432211100
Q ss_pred CCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 039533 861 LPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVH 926 (949)
Q Consensus 861 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 926 (949)
.....+.......+ .+.....+..+.+++.+|++.||++|||++|+++
T Consensus 240 ---~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 287 (336)
T 3fhr_A 240 ---GMKRRIRLGQYGFP---------------NPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMN 287 (336)
T ss_dssp --------------CCC---------------TTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred ---hHHHhhhccccccC---------------chhhccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 00000000000000 0000123456889999999999999999999987
No 271
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=100.00 E-value=2.8e-36 Score=339.96 Aligned_cols=203 Identities=24% Similarity=0.299 Sum_probs=171.0
Q ss_pred HHhcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCCcchHHHHHHHHHHHhcC-CC-----cceeEEeeeeccc
Q 039533 623 NATSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHGASRSFIAECKALKSIR-HR-----NLVKVLTACLGAD 696 (949)
Q Consensus 623 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~-----niv~~~~~~~~~~ 696 (949)
...++|++.+.||+|+||+||+|++..+++.||||+++... ...+++..|+.+++.++ |+ +|+++++++...+
T Consensus 51 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~ 129 (382)
T 2vx3_A 51 KWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKK-AFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRN 129 (382)
T ss_dssp EETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSSH-HHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETT
T ss_pred EeeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEeccH-HHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCC
Confidence 34578999999999999999999999899999999996432 23466778999988885 55 4999999876544
Q ss_pred ccCCccceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeec-
Q 039533 697 YRGNDFKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLD- 775 (949)
Q Consensus 697 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~- 775 (949)
..++||||++ ++|.+++... ....+++..+..++.|++.||+|||++ ..+|+||||||+||+++
T Consensus 130 -----~~~lv~e~~~-~~L~~~l~~~--------~~~~~~~~~~~~i~~qi~~al~~lH~~-~~~ivHrDlkp~NIll~~ 194 (382)
T 2vx3_A 130 -----HLCLVFEMLS-YNLYDLLRNT--------NFRGVSLNLTRKFAQQMCTALLFLATP-ELSIIHCDLKPENILLCN 194 (382)
T ss_dssp -----EEEEEEECCC-CBHHHHHHHT--------TTSCCCHHHHHHHHHHHHHHHHHHTST-TTCEECCCCSGGGEEESS
T ss_pred -----ceEEEEecCC-CCHHHHHhhc--------CcCCCCHHHHHHHHHHHHHHHHHhccC-CCCEEcCCCCcccEEEec
Confidence 7899999996 5999998621 124589999999999999999999964 45899999999999994
Q ss_pred -CCCceEEeecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccc
Q 039533 776 -DYMTARVGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIM 846 (949)
Q Consensus 776 -~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~ 846 (949)
.++.+||+|||+|+....... ...||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 195 ~~~~~~kL~DFG~a~~~~~~~~-----~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~ 261 (382)
T 2vx3_A 195 PKRSAIKIVDFGSSCQLGQRIY-----QYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGA 261 (382)
T ss_dssp TTSCCEEECCCTTCEETTCCCC-----SSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred CCCCcEEEEeccCceecccccc-----cccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 578899999999988754322 345899999999999999999999999999999999999999743
No 272
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=100.00 E-value=1.6e-36 Score=332.54 Aligned_cols=253 Identities=21% Similarity=0.331 Sum_probs=191.5
Q ss_pred HhcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCC--cchHHHHHHHHHHHhcC--CCcceeEEeeeecccccC
Q 039533 624 ATSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHH--GASRSFIAECKALKSIR--HRNLVKVLTACLGADYRG 699 (949)
Q Consensus 624 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~--h~niv~~~~~~~~~~~~~ 699 (949)
..++|++.+.||+|+||.||+|.+. +++.||||++..... ...+.+.+|++++++++ ||||+++++++...+
T Consensus 26 ~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~--- 101 (313)
T 3cek_A 26 KGRIYSILKQIGSGGSSKVFQVLNE-KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQ--- 101 (313)
T ss_dssp TTEEEEEEEEEECCSSEEEEEEECT-TCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSS---
T ss_pred ccceEEEEEEecCCCCEEEEEEEcC-CCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecCC---
Confidence 4567899999999999999999986 588999999975432 23467899999999997 599999999976544
Q ss_pred CccceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCc
Q 039533 700 NDFKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMT 779 (949)
Q Consensus 700 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~ 779 (949)
..++||| +.+++|.+++. ....+++.++..++.|++.||+|||++ +|+||||||+||++++ +.
T Consensus 102 --~~~lv~e-~~~~~L~~~l~----------~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~-~~ 164 (313)
T 3cek_A 102 --YIYMVME-CGNIDLNSWLK----------KKKSIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIVD-GM 164 (313)
T ss_dssp --EEEEEEC-CCSEEHHHHHH----------HCSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEET-TE
T ss_pred --EEEEEEe-cCCCcHHHHHH----------hcCCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcccEEEEC-Ce
Confidence 7899999 56789999996 234689999999999999999999988 9999999999999975 89
Q ss_pred eEEeecccceecCCCCCccccccccCccCccCccccCC-----------CccCCccchHHHHHHHHHHHhCCCCCccccc
Q 039533 780 ARVGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVG-----------CEVSTNGDVYSYGILLLELVIGKKPIDIMFE 848 (949)
Q Consensus 780 ~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----------~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~ 848 (949)
+||+|||+++...............||+.|+|||++.+ ..++.++|||||||++|||++|+.||.....
T Consensus 165 ~kL~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~ 244 (313)
T 3cek_A 165 LKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN 244 (313)
T ss_dssp EEECCCSSSCC--------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCS
T ss_pred EEEeeccccccccCccccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHH
Confidence 99999999987655443222224568999999999875 4688899999999999999999999964322
Q ss_pred cCchhhhhccccCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHH
Q 039533 849 GDINLHNFGRKALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHE 927 (949)
Q Consensus 849 ~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~ 927 (949)
..... ...++........ ...+..+.+++.+||+.||++|||++|+++.
T Consensus 245 ~~~~~------------~~~~~~~~~~~~~------------------~~~~~~l~~li~~~l~~dp~~Rps~~ell~h 293 (313)
T 3cek_A 245 QISKL------------HAIIDPNHEIEFP------------------DIPEKDLQDVLKCCLKRDPKQRISIPELLAH 293 (313)
T ss_dssp HHHHH------------HHHHCTTSCCCCC------------------CCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred HHHHH------------HHHHhcccccCCc------------------ccchHHHHHHHHHHccCCcccCcCHHHHhcC
Confidence 11111 1111111110000 0113457889999999999999999999863
No 273
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00 E-value=2.4e-36 Score=329.42 Aligned_cols=258 Identities=24% Similarity=0.311 Sum_probs=192.3
Q ss_pred hcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCCcchHHHHHHHHHHHhcCCCcceeEEeeeeccc--------
Q 039533 625 TSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHGASRSFIAECKALKSIRHRNLVKVLTACLGAD-------- 696 (949)
Q Consensus 625 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~-------- 696 (949)
.++|++.+.||+|+||.||+|++..+++.||||+++.. ....+.+.+|+.++++++||||+++++++.+..
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~ 83 (303)
T 1zy4_A 5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT-EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTA 83 (303)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEE-HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC----
T ss_pred cccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEecc-HHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhcc
Confidence 45789999999999999999999889999999999643 233467889999999999999999999876431
Q ss_pred ccCCccceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecC
Q 039533 697 YRGNDFKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDD 776 (949)
Q Consensus 697 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~ 776 (949)
.......++||||+++++|.+++.. ....+++.+++.++.|++.||+|||++ +|+||||||+||+++.
T Consensus 84 ~~~~~~~~lv~e~~~~~~L~~~l~~---------~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dlkp~Nil~~~ 151 (303)
T 1zy4_A 84 VKKKSTLFIQMEYCENGTLYDLIHS---------ENLNQQRDEYWRLFRQILEALSYIHSQ---GIIHRDLKPMNIFIDE 151 (303)
T ss_dssp --CEEEEEEEEECCCSCBHHHHHHH---------SCGGGCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECT
T ss_pred cccCCceEEEEecCCCCCHHHhhhc---------cccccchHHHHHHHHHHHHHHHHHHhC---CeecccCCHHhEEEcC
Confidence 1224568999999999999999962 234578889999999999999999988 8999999999999999
Q ss_pred CCceEEeecccceecCCCCC------------ccccccccCccCccCccccCCC-ccCCccchHHHHHHHHHHHhCCCCC
Q 039533 777 YMTARVGDFGLARILSPDHT------------QTSSFSVKGSLGYIAPEYGVGC-EVSTNGDVYSYGILLLELVIGKKPI 843 (949)
Q Consensus 777 ~~~~kl~DfG~a~~~~~~~~------------~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDiwSlGvvl~elltg~~Pf 843 (949)
++.+||+|||.++....... ........||..|+|||++.+. .++.++|||||||++|||++ ||
T Consensus 152 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~ 228 (303)
T 1zy4_A 152 SRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PF 228 (303)
T ss_dssp TSCEEECCCCCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CC
T ss_pred CCCEEEeeCcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---cc
Confidence 99999999999987643211 1111234589999999998764 68999999999999999998 55
Q ss_pred ccccccCchhhhhccccCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHH
Q 039533 844 DIMFEGDINLHNFGRKALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTN 923 (949)
Q Consensus 844 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~e 923 (949)
....... ......... .....+.. ....+..+.+++.+|++.||++|||++|
T Consensus 229 ~~~~~~~-~~~~~~~~~---------~~~~~~~~------------------~~~~~~~~~~li~~~l~~dp~~Rps~~~ 280 (303)
T 1zy4_A 229 STGMERV-NILKKLRSV---------SIEFPPDF------------------DDNKMKVEKKIIRLLIDHDPNKRPGART 280 (303)
T ss_dssp SSHHHHH-HHHHHHHST---------TCCCCTTC------------------CTTTSHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred CCchhHH-HHHHhcccc---------ccccCccc------------------cccchHHHHHHHHHHHhcCcccCcCHHH
Confidence 3221110 000000000 00000000 0123456789999999999999999999
Q ss_pred HHH
Q 039533 924 VVH 926 (949)
Q Consensus 924 v~~ 926 (949)
+++
T Consensus 281 ll~ 283 (303)
T 1zy4_A 281 LLN 283 (303)
T ss_dssp HHH
T ss_pred HhC
Confidence 986
No 274
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=100.00 E-value=3.6e-36 Score=338.51 Aligned_cols=284 Identities=18% Similarity=0.252 Sum_probs=200.9
Q ss_pred hcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCCcchHHHHHHHHHHHhcC-----------CCcceeEEeeee
Q 039533 625 TSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHGASRSFIAECKALKSIR-----------HRNLVKVLTACL 693 (949)
Q Consensus 625 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-----------h~niv~~~~~~~ 693 (949)
.++|++.+.||+|+||.||+|++..+++.||||++... ....+.+.+|+.++++++ ||||+++++++.
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~ 96 (373)
T 1q8y_A 18 DARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGD-KVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFN 96 (373)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEE
T ss_pred CCeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCC-ccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhh
Confidence 35799999999999999999999889999999998643 223467889999999886 899999999986
Q ss_pred cccccCCccceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCee
Q 039533 694 GADYRGNDFKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVL 773 (949)
Q Consensus 694 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIl 773 (949)
..+ ......++||||+ +++|.+++... ....+++..+..++.||+.||+|||+++ +|+||||||+||+
T Consensus 97 ~~~-~~~~~~~lv~e~~-~~~L~~~~~~~--------~~~~~~~~~~~~i~~qi~~aL~~lH~~~--~ivH~Dikp~NIl 164 (373)
T 1q8y_A 97 HKG-PNGVHVVMVFEVL-GENLLALIKKY--------EHRGIPLIYVKQISKQLLLGLDYMHRRC--GIIHTDIKPENVL 164 (373)
T ss_dssp EEE-TTEEEEEEEECCC-CEEHHHHHHHT--------TTSCCCHHHHHHHHHHHHHHHHHHHHTT--CEECSCCSGGGEE
T ss_pred ccC-CCCceEEEEEecC-CCCHHHHHHHh--------hccCCcHHHHHHHHHHHHHHHHHHHhcC--CEEecCCChHHeE
Confidence 543 2233689999999 88999998632 2345899999999999999999999753 8999999999999
Q ss_pred ec------CCCceEEeecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCcccc
Q 039533 774 LD------DYMTARVGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMF 847 (949)
Q Consensus 774 l~------~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~ 847 (949)
++ ..+.+||+|||+++....... ...||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 165 l~~~~~~~~~~~~kl~Dfg~a~~~~~~~~-----~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~ 239 (373)
T 1q8y_A 165 MEIVDSPENLIQIKIADLGNACWYDEHYT-----NSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDE 239 (373)
T ss_dssp EEEEETTTTEEEEEECCCTTCEETTBCCC-----SCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC----
T ss_pred EeccCCCcCcceEEEcccccccccCCCCC-----CCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCc
Confidence 94 445899999999987654322 3458999999999999999999999999999999999999997432
Q ss_pred ccCc-----hhhhhcc--ccCCCch-------hhhcccC-CCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhcccc
Q 039533 848 EGDI-----NLHNFGR--KALPDDV-------MDIVDSS-LLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSM 912 (949)
Q Consensus 848 ~~~~-----~~~~~~~--~~~~~~~-------~~~~d~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~ 912 (949)
.... ....... ...+... ...+... ...........................+..+.+++.+|++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~ 319 (373)
T 1q8y_A 240 GHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQ 319 (373)
T ss_dssp -----CHHHHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGC
T ss_pred ccccCChHHHHHHHHHhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhc
Confidence 1110 0000000 0000000 0000000 0000000000000000011112224667889999999999
Q ss_pred CCCCCCCCHHHHHH
Q 039533 913 ELPQDRTNMTNVVH 926 (949)
Q Consensus 913 ~dP~~RPs~~ev~~ 926 (949)
.||++|||++|+++
T Consensus 320 ~dP~~Rpt~~ell~ 333 (373)
T 1q8y_A 320 LDPRKRADAGGLVN 333 (373)
T ss_dssp SSTTTCBCHHHHHT
T ss_pred cCccccCCHHHHhh
Confidence 99999999999987
No 275
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=100.00 E-value=1e-36 Score=334.91 Aligned_cols=243 Identities=21% Similarity=0.270 Sum_probs=197.5
Q ss_pred HHhcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCCc------chHHHHHHHHHHHhcC--CCcceeEEeeeec
Q 039533 623 NATSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHG------ASRSFIAECKALKSIR--HRNLVKVLTACLG 694 (949)
Q Consensus 623 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~--h~niv~~~~~~~~ 694 (949)
...++|++.+.||+|+||.||+|++..+++.||||+++..... ..+.+.+|+.++++++ |+||+++++++..
T Consensus 40 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~ 119 (320)
T 3a99_A 40 PLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFER 119 (320)
T ss_dssp CCTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEEC
T ss_pred CccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEec
Confidence 3457899999999999999999999989999999999754321 2245778999999996 5999999999765
Q ss_pred ccccCCccceeEeeeccC-CChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCee
Q 039533 695 ADYRGNDFKASVYEFMHY-GSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVL 773 (949)
Q Consensus 695 ~~~~~~~~~~lv~e~~~~-gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIl 773 (949)
.+ ..++|||++.+ ++|.+++. ....+++..+..++.|++.||+|||+. +|+||||||+||+
T Consensus 120 ~~-----~~~lv~e~~~~~~~L~~~l~----------~~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIl 181 (320)
T 3a99_A 120 PD-----SFVLILERPEPVQDLFDFIT----------ERGALQEELARSFFWQVLEAVRHCHNC---GVLHRDIKDENIL 181 (320)
T ss_dssp SS-----EEEEEEECCSSEEEHHHHHH----------HHCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEE
T ss_pred CC-----cEEEEEEcCCCCccHHHHHh----------ccCCCCHHHHHHHHHHHHHHHHHHHHC---CcEeCCCCHHHEE
Confidence 44 78999999976 89999986 235689999999999999999999987 9999999999999
Q ss_pred ec-CCCceEEeecccceecCCCCCccccccccCccCccCccccCCCcc-CCccchHHHHHHHHHHHhCCCCCccccccCc
Q 039533 774 LD-DYMTARVGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEV-STNGDVYSYGILLLELVIGKKPIDIMFEGDI 851 (949)
Q Consensus 774 l~-~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~ 851 (949)
++ +++.+||+|||+++........ ...||+.|+|||++.+..+ +.++|||||||++|||++|+.||.....
T Consensus 182 l~~~~~~~kL~Dfg~~~~~~~~~~~----~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~--- 254 (320)
T 3a99_A 182 IDLNRGELKLIDFGSGALLKDTVYT----DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE--- 254 (320)
T ss_dssp EETTTTEEEECCCTTCEECCSSCBC----CCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHH---
T ss_pred EeCCCCCEEEeeCcccccccccccc----CCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChhh---
Confidence 99 7899999999999877543221 3458999999999877665 6889999999999999999999963210
Q ss_pred hhhhhccccCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 039533 852 NLHNFGRKALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVH 926 (949)
Q Consensus 852 ~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 926 (949)
........ . ...+..+.+++.+||+.||++|||++|+++
T Consensus 255 ----------------~~~~~~~~-~-------------------~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 293 (320)
T 3a99_A 255 ----------------IIRGQVFF-R-------------------QRVSSECQHLIRWCLALRPSDRPTFEEIQN 293 (320)
T ss_dssp ----------------HHHCCCCC-S-------------------SCCCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred ----------------hhcccccc-c-------------------ccCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 00000000 0 012345789999999999999999999976
No 276
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.8e-36 Score=331.92 Aligned_cols=244 Identities=21% Similarity=0.263 Sum_probs=191.2
Q ss_pred HHHhcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCCc------chHHHHHHHHHHHhc----CCCcceeEEee
Q 039533 622 YNATSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHG------ASRSFIAECKALKSI----RHRNLVKVLTA 691 (949)
Q Consensus 622 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l----~h~niv~~~~~ 691 (949)
....++|++.+.||+|+||.||+|++..+++.||||+++..... ....+.+|+.++.++ +||||++++++
T Consensus 27 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~ 106 (312)
T 2iwi_A 27 EAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDW 106 (312)
T ss_dssp ------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEE
T ss_pred hhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEE
Confidence 34467899999999999999999999888999999999654321 223456799999998 89999999999
Q ss_pred eecccccCCccceeEeee-ccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCC
Q 039533 692 CLGADYRGNDFKASVYEF-MHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPS 770 (949)
Q Consensus 692 ~~~~~~~~~~~~~lv~e~-~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~ 770 (949)
+...+ ..++|||| +.+++|.+++. ....+++..+..++.|++.||+|||++ +|+||||||+
T Consensus 107 ~~~~~-----~~~~v~e~~~~~~~L~~~l~----------~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~ 168 (312)
T 2iwi_A 107 FETQE-----GFMLVLERPLPAQDLFDYIT----------EKGPLGEGPSRCFFGQVVAAIQHCHSR---GVVHRDIKDE 168 (312)
T ss_dssp C----------CEEEEECCSSEEEHHHHHH----------HHCSCCHHHHHHHHHHHHHHHHHHHHH---TEECCCCSGG
T ss_pred EecCC-----eEEEEEEecCCCCCHHHHHH----------hcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChh
Confidence 75443 78999999 78999999996 234589999999999999999999988 8999999999
Q ss_pred Ceeec-CCCceEEeecccceecCCCCCccccccccCccCccCccccCCCcc-CCccchHHHHHHHHHHHhCCCCCccccc
Q 039533 771 NVLLD-DYMTARVGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEV-STNGDVYSYGILLLELVIGKKPIDIMFE 848 (949)
Q Consensus 771 NIll~-~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDiwSlGvvl~elltg~~Pf~~~~~ 848 (949)
||+++ .++.+||+|||+++....... ....||..|+|||++.+..+ +.++||||||+++|||++|+.||.....
T Consensus 169 Nil~~~~~~~~kl~dfg~~~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~ 244 (312)
T 2iwi_A 169 NILIDLRRGCAKLIDFGSGALLHDEPY----TDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQE 244 (312)
T ss_dssp GEEEETTTTEEEECCCSSCEECCSSCB----CCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHH
T ss_pred hEEEeCCCCeEEEEEcchhhhcccCcc----cccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChHH
Confidence 99999 889999999999987754432 23458999999999876665 4589999999999999999999963210
Q ss_pred cCchhhhhccccCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 039533 849 GDINLHNFGRKALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVH 926 (949)
Q Consensus 849 ~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 926 (949)
..+..... + ...+..+.+++.+|++.||++|||++|+++
T Consensus 245 -------------------~~~~~~~~-~-------------------~~~~~~~~~li~~~l~~~p~~Rps~~e~l~ 283 (312)
T 2iwi_A 245 -------------------ILEAELHF-P-------------------AHVSPDCCALIRRCLAPKPSSRPSLEEILL 283 (312)
T ss_dssp -------------------HHHTCCCC-C-------------------TTSCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred -------------------HhhhccCC-c-------------------ccCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 00000000 0 012345788999999999999999999987
No 277
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00 E-value=4.1e-36 Score=341.41 Aligned_cols=210 Identities=21% Similarity=0.314 Sum_probs=155.0
Q ss_pred CCCC-CCeeeeecCceEEEEEEc--CCCEEEEEEEEecCCCcchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCccc
Q 039533 627 GFSS-ANLVGVGSFGSVYKGIID--EGRTTIAVKVFNLQHHGASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFK 703 (949)
Q Consensus 627 ~y~~-~~~lg~G~~g~Vy~~~~~--~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 703 (949)
.|.+ .++||+|+||.||+|++. .+++.||||++.... ....+.+|+.++++++||||+++++++... .....
T Consensus 21 ~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~E~~~l~~l~hpniv~~~~~~~~~---~~~~~ 95 (405)
T 3rgf_A 21 LFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTG--ISMSACREIALLRELKHPNVISLQKVFLSH---ADRKV 95 (405)
T ss_dssp HEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSS--CCHHHHHHHHHHHHCCCTTBCCCCEEEEET---TTTEE
T ss_pred hhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCC--CCHHHHHHHHHHHhcCCCCeeeEeeEEecC---CCCeE
Confidence 3555 568999999999999976 457899999986432 345788999999999999999999998532 23478
Q ss_pred eeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeee----cCCCc
Q 039533 704 ASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLL----DDYMT 779 (949)
Q Consensus 704 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll----~~~~~ 779 (949)
++||||++ ++|.+++....... .......+++..++.|+.|++.||+|||++ +|+||||||+||++ +.++.
T Consensus 96 ~lv~e~~~-~~l~~~~~~~~~~~-~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~ 170 (405)
T 3rgf_A 96 WLLFDYAE-HDLWHIIKFHRASK-ANKKPVQLPRGMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGR 170 (405)
T ss_dssp EEEEECCS-EEHHHHHHHHHHHC--------CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECCSSTTTTC
T ss_pred EEEEeCCC-CCHHHHHHHhcccc-ccccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeCCCcCHHHeEEecCCCCCCc
Confidence 99999997 48888775211000 001223589999999999999999999988 89999999999999 67889
Q ss_pred eEEeecccceecCCCCC-ccccccccCccCccCccccCCC-ccCCccchHHHHHHHHHHHhCCCCCccc
Q 039533 780 ARVGDFGLARILSPDHT-QTSSFSVKGSLGYIAPEYGVGC-EVSTNGDVYSYGILLLELVIGKKPIDIM 846 (949)
Q Consensus 780 ~kl~DfG~a~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDiwSlGvvl~elltg~~Pf~~~ 846 (949)
+||+|||+|+....... ........||+.|+|||++.+. .++.++|||||||++|||++|+.||...
T Consensus 171 ~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~ 239 (405)
T 3rgf_A 171 VKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCR 239 (405)
T ss_dssp EEECCTTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCC
T ss_pred EEEEECCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCc
Confidence 99999999987654322 1222245689999999998874 5899999999999999999999999643
No 278
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=100.00 E-value=1.6e-35 Score=353.70 Aligned_cols=239 Identities=21% Similarity=0.212 Sum_probs=147.6
Q ss_pred ccEEEccCccccCCCCCCCCCCCcccEEEeecceecccCCCcccccCCCCEEecCCcccccccCcccccccccceeeccc
Q 039533 296 IKTLFLNNNKIYGSIPAGIGNFVNLQRLDMWNNQLSGTIPPAIGELQNLKILGLNRNKLSGNIPPSIGNLKMLLNLFLND 375 (949)
Q Consensus 296 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 375 (949)
|++|+|++|.|++..|..|+.+++|++|+|++|.+++. .++.+++|+.|++++|.+++ +...++|+.|++++
T Consensus 149 L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~---~~~~l~~L~~L~l~~n~l~~-----l~~~~~L~~L~ls~ 220 (597)
T 3oja_B 149 LTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHV---DLSLIPSLFHANVSYNLLST-----LAIPIAVEELDASH 220 (597)
T ss_dssp CCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBC---CGGGCTTCSEEECCSSCCSE-----EECCTTCSEEECCS
T ss_pred CCEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCCCc---ChhhhhhhhhhhcccCcccc-----ccCCchhheeeccC
Confidence 33333444444433444444444444555555444432 13334455555555555543 12233455555555
Q ss_pred ccccccCCCCCCCCCCCcEEEeeCccccCCCCCcccCCcccceeeccCCCccCCCCccccccccccceeeeccccccccC
Q 039533 376 NFLEVSIPSSLGQCESLIEINLSNNNLSGTIPPQFFSLSSLSISLDWSRNKLTGSLPIEVGKLKILEFLYVYENRLEGEI 455 (949)
Q Consensus 376 N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~l~~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 455 (949)
|.++...+.. .++|+.|+|++|++++ +..+..+++| +.|+|++|.+++.+|..++.+++|+.|+|++|++++ +
T Consensus 221 n~l~~~~~~~---~~~L~~L~L~~n~l~~--~~~l~~l~~L-~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-l 293 (597)
T 3oja_B 221 NSINVVRGPV---NVELTILKLQHNNLTD--TAWLLNYPGL-VEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-L 293 (597)
T ss_dssp SCCCEEECSC---CSCCCEEECCSSCCCC--CGGGGGCTTC-SEEECCSSCCCEEESGGGTTCSSCCEEECTTSCCCE-E
T ss_pred Cccccccccc---CCCCCEEECCCCCCCC--ChhhccCCCC-CEEECCCCccCCCCHHHhcCccCCCEEECCCCCCCC-C
Confidence 5554332221 1456667777777664 3556666666 567777777777777777777888888888888874 5
Q ss_pred CcccccccchhhcccCccccccccCCCcCCCCCCCEEECCCCcCCCcCcccccCCccceEeCCCCcCcCccccccccccc
Q 039533 456 PSTFGNCIRLEQLGMGGNLFQGPISSSLGSLRGLRVLDLSQNNLSGEIPKFLAGLSLNNLNLSYNDLEGMVTTEGVFKNA 535 (949)
Q Consensus 456 p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~l~ls~N~l~~~~~~~~~~~~~ 535 (949)
|..++.+++|+.|+|++|.++ .+|..+..+++|+.|+|++|+|++..+..+ ..|+.|++++|++++... ...+..+
T Consensus 294 ~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~l~~L~~L~L~~N~l~~~~~~~~--~~L~~L~l~~N~~~~~~~-~~~~~~~ 369 (597)
T 3oja_B 294 NLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVTLKLSTH--HTLKNLTLSHNDWDCNSL-RALFRNV 369 (597)
T ss_dssp ECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCCCCCCTT--CCCSEEECCSSCEEHHHH-HHHTTTC
T ss_pred CcccccCCCCcEEECCCCCCC-ccCcccccCCCCCEEECCCCCCCCcChhhc--CCCCEEEeeCCCCCChhH-HHHHHHH
Confidence 666777788888888888887 567777788888888888888876532222 138888888888887643 2345666
Q ss_pred ccccccCCCCCCCCCCCC
Q 039533 536 SATRILGNSKLCGGISEF 553 (949)
Q Consensus 536 ~~~~~~gn~~~c~~~~~~ 553 (949)
....+.+++..|+.+...
T Consensus 370 ~~~~~~~~~~~C~~~~~~ 387 (597)
T 3oja_B 370 ARPAVDDADQHCKIDYQL 387 (597)
T ss_dssp CTTTBCCCCCCCCTTCEE
T ss_pred hhhccccccccCCcchhc
Confidence 677788899999875443
No 279
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=100.00 E-value=3.5e-35 Score=332.38 Aligned_cols=232 Identities=22% Similarity=0.225 Sum_probs=129.5
Q ss_pred EEccCccccCCCCCCCCCCCcccEEEeecceecccCCCcccccCCCCEEecCCcccccccCcccccccccceeecccccc
Q 039533 299 LFLNNNKIYGSIPAGIGNFVNLQRLDMWNNQLSGTIPPAIGELQNLKILGLNRNKLSGNIPPSIGNLKMLLNLFLNDNFL 378 (949)
Q Consensus 299 L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l 378 (949)
|++++|++++..|..+..+++|++|++++|++++. .+..+++|+.|++++|.+++. ...++|+.|++++|.+
T Consensus 146 L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~---~~~~l~~L~~L~l~~n~l~~~-----~~~~~L~~L~l~~n~l 217 (390)
T 3o6n_A 146 LSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHV---DLSLIPSLFHANVSYNLLSTL-----AIPIAVEELDASHNSI 217 (390)
T ss_dssp EECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBC---CGGGCTTCSEEECCSSCCSEE-----ECCSSCSEEECCSSCC
T ss_pred EECCCCccCccChhhccCCCCCCEEECCCCcCCcc---ccccccccceeeccccccccc-----CCCCcceEEECCCCee
Confidence 33333333333333344444444444444444422 133344444444444444421 1223444555555554
Q ss_pred cccCCCCCCCCCCCcEEEeeCccccCCCCCcccCCcccceeeccCCCccCCCCccccccccccceeeeccccccccCCcc
Q 039533 379 EVSIPSSLGQCESLIEINLSNNNLSGTIPPQFFSLSSLSISLDWSRNKLTGSLPIEVGKLKILEFLYVYENRLEGEIPST 458 (949)
Q Consensus 379 ~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~l~~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~ 458 (949)
+.. |..+ .++|+.|++++|++++. ..+..+++| +.|++++|.+++..|..+..+++|+.|+|++|++++ +|..
T Consensus 218 ~~~-~~~~--~~~L~~L~l~~n~l~~~--~~l~~l~~L-~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~ 290 (390)
T 3o6n_A 218 NVV-RGPV--NVELTILKLQHNNLTDT--AWLLNYPGL-VEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLY 290 (390)
T ss_dssp CEE-ECCC--CSSCCEEECCSSCCCCC--GGGGGCTTC-SEEECCSSCCCEEESGGGTTCSSCCEEECCSSCCCE-EECS
T ss_pred eec-cccc--cccccEEECCCCCCccc--HHHcCCCCc-cEEECCCCcCCCcChhHccccccCCEEECCCCcCcc-cCcc
Confidence 432 2211 24566666666666532 345555555 566666666666666667777777777777777763 5555
Q ss_pred cccccchhhcccCccccccccCCCcCCCCCCCEEECCCCcCCCcCcccccCCc-cceEeCCCCcCcCccccccccccccc
Q 039533 459 FGNCIRLEQLGMGGNLFQGPISSSLGSLRGLRVLDLSQNNLSGEIPKFLAGLS-LNNLNLSYNDLEGMVTTEGVFKNASA 537 (949)
Q Consensus 459 ~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~-L~~l~ls~N~l~~~~~~~~~~~~~~~ 537 (949)
+..+++|+.|+|++|+++ .+|..+..+++|+.|+|++|++++.. +..++ |+.|++++|++++... ...+..+..
T Consensus 291 ~~~l~~L~~L~L~~n~l~-~~~~~~~~l~~L~~L~L~~N~i~~~~---~~~~~~L~~L~l~~N~~~~~~~-~~~~~~~~~ 365 (390)
T 3o6n_A 291 GQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVTLK---LSTHHTLKNLTLSHNDWDCNSL-RALFRNVAR 365 (390)
T ss_dssp SSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCCCC---CCTTCCCSEEECCSSCEEHHHH-HHHTTTCCT
T ss_pred cCCCCCCCEEECCCCcce-ecCccccccCcCCEEECCCCccceeC---chhhccCCEEEcCCCCccchhH-HHHHHHHHh
Confidence 666777777777777777 45556677777777777777777543 23333 7788888888776422 233455556
Q ss_pred ccccCCCCCCCCC
Q 039533 538 TRILGNSKLCGGI 550 (949)
Q Consensus 538 ~~~~gn~~~c~~~ 550 (949)
..+.+++..|..+
T Consensus 366 ~~~~~~~~~c~~~ 378 (390)
T 3o6n_A 366 PAVDDADQHCKID 378 (390)
T ss_dssp TTBCCCCSCCCTT
T ss_pred hcccccCceeccc
Confidence 6677777777654
No 280
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=100.00 E-value=1.2e-35 Score=331.74 Aligned_cols=279 Identities=18% Similarity=0.205 Sum_probs=197.5
Q ss_pred hcCCCCCCeeeeecCceEEEEEEcCCC-EEEEEEEEecCCCcchHHHHHHHHHHHhcCCCc------ceeEEeeeecccc
Q 039533 625 TSGFSSANLVGVGSFGSVYKGIIDEGR-TTIAVKVFNLQHHGASRSFIAECKALKSIRHRN------LVKVLTACLGADY 697 (949)
Q Consensus 625 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~-~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n------iv~~~~~~~~~~~ 697 (949)
.++|++.+.||+|+||.||+|.+..++ +.||+|+++... ...+.+.+|+.++++++|++ ++.+++++....
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~- 95 (355)
T 2eu9_A 18 QERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVG-KYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHG- 95 (355)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETT-
T ss_pred cccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEcccc-cchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCC-
Confidence 368999999999999999999997665 799999996432 33467888999999997665 888888865444
Q ss_pred cCCccceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeee---
Q 039533 698 RGNDFKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLL--- 774 (949)
Q Consensus 698 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll--- 774 (949)
..++||||+ ++++.+++... ....+++.++..++.|++.||+|||++ +|+||||||+||++
T Consensus 96 ----~~~lv~e~~-~~~l~~~l~~~--------~~~~~~~~~~~~i~~qi~~~L~~lH~~---~ivH~Dlkp~NIll~~~ 159 (355)
T 2eu9_A 96 ----HMCIAFELL-GKNTFEFLKEN--------NFQPYPLPHVRHMAYQLCHALRFLHEN---QLTHTDLKPENILFVNS 159 (355)
T ss_dssp ----EEEEEEECC-CCBHHHHHHHT--------TTCCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEESCC
T ss_pred ----eEEEEEecc-CCChHHHHHhc--------cCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEecc
Confidence 789999999 56777776521 224589999999999999999999977 99999999999999
Q ss_pred ----------------cCCCceEEeecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHh
Q 039533 775 ----------------DDYMTARVGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVI 838 (949)
Q Consensus 775 ----------------~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~ellt 838 (949)
+.++.+||+|||+++....... ...||+.|+|||++.+..++.++|||||||++|||++
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~~-----~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~ 234 (355)
T 2eu9_A 160 EFETLYNEHKSCEEKSVKNTSIRVADFGSATFDHEHHT-----TIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYR 234 (355)
T ss_dssp CEEEEECCC-CCCEEEESCCCEEECCCTTCEETTSCCC-----SSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHH
T ss_pred cccccccccccccccccCCCcEEEeecCcccccccccc-----CCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHh
Confidence 5678999999999987544322 3459999999999999999999999999999999999
Q ss_pred CCCCCccccccCc-hhhhhccccCCCchhhhcc-------c--CCCCCchh-hhhhhchhhhhhhhhhHHHHHHHHHHHh
Q 039533 839 GKKPIDIMFEGDI-NLHNFGRKALPDDVMDIVD-------S--SLLPDDED-LILTGNQRQKQARINSIIECLISMVRIG 907 (949)
Q Consensus 839 g~~Pf~~~~~~~~-~~~~~~~~~~~~~~~~~~d-------~--~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~l~ 907 (949)
|+.||........ ..........+........ . .......+ .......................+.+++
T Consensus 235 g~~pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 314 (355)
T 2eu9_A 235 GFTLFQTHENREHLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLM 314 (355)
T ss_dssp SSCSCCCSSHHHHHHHHHHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHH
T ss_pred CCCCCCCCCHHHHHHHHHHHcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHH
Confidence 9999974322110 0000000111111000000 0 00000000 0000000000000011123456789999
Q ss_pred hccccCCCCCCCCHHHHHH
Q 039533 908 VACSMELPQDRTNMTNVVH 926 (949)
Q Consensus 908 ~~cl~~dP~~RPs~~ev~~ 926 (949)
.+|++.||++|||++|+++
T Consensus 315 ~~~L~~dP~~Rpt~~e~l~ 333 (355)
T 2eu9_A 315 RRMLEFDPAQRITLAEALL 333 (355)
T ss_dssp HHHTCSSTTTSCCHHHHTT
T ss_pred HHHhcCChhhCcCHHHHhc
Confidence 9999999999999999974
No 281
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=100.00 E-value=4.1e-36 Score=352.02 Aligned_cols=287 Identities=22% Similarity=0.257 Sum_probs=204.5
Q ss_pred hcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCC-CcchHHHHHHHHHHHhcCCCcceeEEeeeeccc-ccCCcc
Q 039533 625 TSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQH-HGASRSFIAECKALKSIRHRNLVKVLTACLGAD-YRGNDF 702 (949)
Q Consensus 625 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~-~~~~~~ 702 (949)
.++|++.+.||+|+||.||+|.+..+++.||||+++... ....+.+.+|++++++++||||+++++++.... +.....
T Consensus 13 ~grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~ 92 (676)
T 3qa8_A 13 CGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDL 92 (676)
T ss_dssp ----CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSS
T ss_pred CCCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCe
Confidence 478999999999999999999998889999999987542 233467899999999999999999999875522 223557
Q ss_pred ceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCc---
Q 039533 703 KASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMT--- 779 (949)
Q Consensus 703 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~--- 779 (949)
.++||||+++|+|.+++.... ....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.
T Consensus 93 ~~LVmEy~~ggsL~~~L~~~~-------~~~~lse~~i~~I~~QLl~aL~yLHs~---gIVHrDLKP~NILl~~~g~~~~ 162 (676)
T 3qa8_A 93 PLLAMEYCEGGDLRKYLNQFE-------NCCGLKEGPIRTLLSDISSALRYLHEN---RIIHRDLKPENIVLQPGPQRLI 162 (676)
T ss_dssp CCCEEECCSSCBHHHHHHSSS-------CTTCCCSSHHHHHHHHHHHHHHHHHHT---TBCCCCCCSTTEEEECCSSSCE
T ss_pred EEEEEEeCCCCCHHHHHHhcc-------cCCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEeecCCCcee
Confidence 899999999999999997321 123588889999999999999999987 9999999999999997665
Q ss_pred eEEeecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhccc
Q 039533 780 ARVGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRK 859 (949)
Q Consensus 780 ~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~ 859 (949)
+||+|||.++........ ....||..|+|||++.+..++.++|||||||++|||++|+.||..... ...|...
T Consensus 163 vKL~DFG~a~~~~~~~~~---~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~----~~~~~~~ 235 (676)
T 3qa8_A 163 HKIIDLGYAKELDQGELC---TEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQ----PVQWHGK 235 (676)
T ss_dssp EEECSCCCCCBTTSCCCC---CCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCH----HHHSSTT
T ss_pred EEEccccccccccccccc---ccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccc----hhhhhhh
Confidence 999999999876554332 235699999999999999999999999999999999999999964311 1111111
Q ss_pred cCCCchhh-hcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHH-----HHHHHHHhHH
Q 039533 860 ALPDDVMD-IVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTN-----VVHELQSIKN 933 (949)
Q Consensus 860 ~~~~~~~~-~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~e-----v~~~L~~i~~ 933 (949)
........ ........... . ......+. ......+..+.+++.+|++.||++|||++| +.+.++.+.+
T Consensus 236 i~~~~~~~~~~~~~l~g~~~--~-~~~lp~p~---~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL~hp~F~~l~~iL~ 309 (676)
T 3qa8_A 236 VREKSNEHIVVYDDLTGAVK--F-SSVLPTPN---HLSGILAGKLERWLQCMLMWHQRQRGTDPQNPNVGCFQALDSILS 309 (676)
T ss_dssp CC------CCSCCCCSSSCC--C-CSSSCCSC---CCCGGGHHHHHHHHHHHSCSSCC---CCTTCCCCTTHHHHHHHHC
T ss_pred hhcccchhhhhhhhhccccc--c-ccccCCch---hhchhhhHHHHHHHHHHccCCHhhCcCHHHHhcCHHHHHHHHHHh
Confidence 11000000 00000000000 0 00000000 001134667899999999999999999988 5566666654
Q ss_pred h
Q 039533 934 I 934 (949)
Q Consensus 934 ~ 934 (949)
.
T Consensus 310 ~ 310 (676)
T 3qa8_A 310 L 310 (676)
T ss_dssp C
T ss_pred c
Confidence 4
No 282
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=6.4e-36 Score=326.84 Aligned_cols=255 Identities=31% Similarity=0.492 Sum_probs=220.9
Q ss_pred cccEEEccCccccC--CCCCCCCCCCcccEEEeec-ceecccCCCcccccCCCCEEecCCcccccccCccccccccccee
Q 039533 295 TIKTLFLNNNKIYG--SIPAGIGNFVNLQRLDMWN-NQLSGTIPPAIGELQNLKILGLNRNKLSGNIPPSIGNLKMLLNL 371 (949)
Q Consensus 295 ~L~~L~L~~N~l~~--~~~~~~~~l~~L~~L~L~~-N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 371 (949)
+++.|+|++|++++ .+|..++.+++|++|+|++ |.+.+.+|..|+++++|++|+|++|++++.+|..|.++++|++|
T Consensus 51 ~l~~L~L~~~~l~~~~~~~~~l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L 130 (313)
T 1ogq_A 51 RVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTL 130 (313)
T ss_dssp CEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEE
T ss_pred eEEEEECCCCCccCCcccChhHhCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEE
Confidence 57788888888887 7788888888888888884 88888888888888888888888888888888888888888888
Q ss_pred ecccccccccCCCCCCCCCCCcEEEeeCccccCCCCCcccCCc-ccceeeccCCCccCCCCccccccccccceeeecccc
Q 039533 372 FLNDNFLEVSIPSSLGQCESLIEINLSNNNLSGTIPPQFFSLS-SLSISLDWSRNKLTGSLPIEVGKLKILEFLYVYENR 450 (949)
Q Consensus 372 ~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~-~l~~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 450 (949)
+|++|.+++.+|..|..+++|++|++++|++++.+|..++.+. .| +.|++++|++++.+|..+..++ |++|+|++|+
T Consensus 131 ~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L-~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N~ 208 (313)
T 1ogq_A 131 DFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLF-TSMTISRNRLTGKIPPTFANLN-LAFVDLSRNM 208 (313)
T ss_dssp ECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTC-CEEECCSSEEEEECCGGGGGCC-CSEEECCSSE
T ss_pred eCCCCccCCcCChHHhcCCCCCeEECcCCcccCcCCHHHhhhhhcC-cEEECcCCeeeccCChHHhCCc-ccEEECcCCc
Confidence 8888888888888888888888888888888888888888887 56 7888888888888888888887 9999999999
Q ss_pred ccccCCcccccccchhhcccCccccccccCCCcCCCCCCCEEECCCCcCCCcCcccccCCc-cceEeCCCCcCcCccccc
Q 039533 451 LEGEIPSTFGNCIRLEQLGMGGNLFQGPISSSLGSLRGLRVLDLSQNNLSGEIPKFLAGLS-LNNLNLSYNDLEGMVTTE 529 (949)
Q Consensus 451 l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~-L~~l~ls~N~l~~~~~~~ 529 (949)
+++.+|..|..+++|+.|+|++|++++.+|. +..+++|++|+|++|++++.+|..+..++ |+.|+|++|+++|.+|..
T Consensus 209 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~ 287 (313)
T 1ogq_A 209 LEGDASVLFGSDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQG 287 (313)
T ss_dssp EEECCGGGCCTTSCCSEEECCSSEECCBGGG-CCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCS
T ss_pred ccCcCCHHHhcCCCCCEEECCCCceeeecCc-ccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccccCCCC
Confidence 9988889999999999999999999877766 88899999999999999999999888776 999999999999999888
Q ss_pred ccccccccccccCCCCCCCCCCC
Q 039533 530 GVFKNASATRILGNSKLCGGISE 552 (949)
Q Consensus 530 ~~~~~~~~~~~~gn~~~c~~~~~ 552 (949)
+.+.++..+.+.||+++||.|.+
T Consensus 288 ~~l~~L~~l~l~~N~~lc~~p~~ 310 (313)
T 1ogq_A 288 GNLQRFDVSAYANNKCLCGSPLP 310 (313)
T ss_dssp TTGGGSCGGGTCSSSEEESTTSS
T ss_pred ccccccChHHhcCCCCccCCCCC
Confidence 88889999999999999997643
No 283
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=100.00 E-value=3.1e-35 Score=316.88 Aligned_cols=241 Identities=12% Similarity=0.042 Sum_probs=183.1
Q ss_pred cCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCCc---chHHHHHHHHHHHhcCCCcceeEEeeeecccccCCcc
Q 039533 626 SGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHG---ASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDF 702 (949)
Q Consensus 626 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 702 (949)
++|++.+.||+|+||.||+|++..+++.||||++...... ..+.+.+|+..+++++||||+++++++...+ .
T Consensus 31 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~-----~ 105 (286)
T 3uqc_A 31 GRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRA-----G 105 (286)
T ss_dssp TTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETT-----E
T ss_pred CcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECC-----c
Confidence 5799999999999999999999988999999999754332 2367899999999999999999999976544 7
Q ss_pred ceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEE
Q 039533 703 KASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARV 782 (949)
Q Consensus 703 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl 782 (949)
.++||||+++++|.+++.. .....++.+|+.|++.||+|||++ +|+||||||+||+++.++.+||
T Consensus 106 ~~lv~e~~~g~~L~~~l~~------------~~~~~~~~~i~~ql~~aL~~lH~~---givH~Dikp~NIll~~~g~~kl 170 (286)
T 3uqc_A 106 GLVVAEWIRGGSLQEVADT------------SPSPVGAIRAMQSLAAAADAAHRA---GVALSIDHPSRVRVSIDGDVVL 170 (286)
T ss_dssp EEEEEECCCEEEHHHHHTT------------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEETTSCEEE
T ss_pred EEEEEEecCCCCHHHHHhc------------CCChHHHHHHHHHHHHHHHHHHHC---CCccCCCCcccEEEcCCCCEEE
Confidence 8999999999999999951 135567889999999999999988 9999999999999999999999
Q ss_pred eecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhccccCC
Q 039533 783 GDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKALP 862 (949)
Q Consensus 783 ~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~ 862 (949)
+++| |++ .++.++|||||||++|||+||+.||.......... .......
T Consensus 171 ~~~~----------------------~~~-------~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~--~~~~~~~ 219 (286)
T 3uqc_A 171 AYPA----------------------TMP-------DANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLA--PAERDTA 219 (286)
T ss_dssp CSCC----------------------CCT-------TCCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSE--ECCBCTT
T ss_pred Eecc----------------------ccC-------CCCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhH--HHHHHhc
Confidence 8543 333 26789999999999999999999997432211000 0000000
Q ss_pred CchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHHhHHhhccCCCCC
Q 039533 863 DDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVHELQSIKNILLGVELCP 942 (949)
Q Consensus 863 ~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~~L~~i~~~~~~~~~~~ 942 (949)
.. . ..+. ......+..+.+++.+||+.||++| |+.|+++.|+++..........|
T Consensus 220 ~~--------~-~~~~---------------~~~~~~~~~l~~li~~~l~~dP~~R-s~~el~~~L~~~~~~~~~~~~~~ 274 (286)
T 3uqc_A 220 GQ--------P-IEPA---------------DIDRDIPFQISAVAARSVQGDGGIR-SASTLLNLMQQATAVADRTEVLG 274 (286)
T ss_dssp SC--------B-CCHH---------------HHCTTSCHHHHHHHHHHHCTTSSCC-CHHHHHHHHHHHHC---------
T ss_pred cC--------C-CChh---------------hcccCCCHHHHHHHHHHcccCCccC-CHHHHHHHHHHHhccCCccCCCC
Confidence 00 0 0000 0001335568899999999999999 99999999999987765543333
No 284
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=100.00 E-value=9.1e-36 Score=327.60 Aligned_cols=273 Identities=20% Similarity=0.276 Sum_probs=172.2
Q ss_pred cCCCChhhHHHHHHHHhccCCCCCCCccCc----cCCCCcceeeeeEEeC--------CCCcEEEEEcCCCCCCccccCC
Q 039533 17 AGTGNETDRVALLEFKSKSTYDPVGVLGTW----NESIHFCKWYGVTCSR--------RHQRVTLLDLRSLKLAGSVSHF 84 (949)
Q Consensus 17 ~~~~~~~~~~aLl~~k~~~~~~~~~~l~sW----~~~~~~C~w~gv~C~~--------~~~~v~~l~l~~~~l~g~~~~~ 84 (949)
..++..+|++||++||+++..|+.+.+++| ....++|.|.|++|+. ...+|+.|+|++++++ .+|+.
T Consensus 21 ~~~~~~~~~~aLl~~k~~~~~~~~~~~~~w~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~~~l~~L~L~~n~l~-~lp~~ 99 (328)
T 4fcg_A 21 GSTALRPYHDVLSQWQRHYNADRNRWHSAWRQANSNNPQIETRTGRALKATADLLEDATQPGRVALELRSVPLP-QFPDQ 99 (328)
T ss_dssp --CCCCCHHHHHHHHHHHHHHCCTTHHHHHHHHTTTCTTSCCSHHHHHHHHHHHHHHHTSTTCCEEEEESSCCS-SCCSC
T ss_pred ccccCchHHHHHHHHHHhccCCchhhhhhhcccccccccccccCCcchhhhHHHHhcccccceeEEEccCCCch-hcChh
Confidence 345668999999999998877898889999 4567899999999953 2345666666666666 55666
Q ss_pred CCCCCCCceeeccCceeccccCCcccCcccCcEEeeccccccCcCCCCCCCCccceeecCCCccccccccccccCCCCCc
Q 039533 85 IGNLSFLKQLYLQVNSFTHEIPSEIGGLRRLKVLALNNNSICGEIPTNISRCSTLIPIHPQNNQLVGKILSRFSSLSKTE 164 (949)
Q Consensus 85 l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~L~~L~ 164 (949)
++++++|++|+|++|.++ .+|..|+++++|++|+|++|.++ .+|..|+++++| +
T Consensus 100 l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L------------------------~ 153 (328)
T 4fcg_A 100 AFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRL------------------------R 153 (328)
T ss_dssp GGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTC------------------------C
T ss_pred hhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCC------------------------C
Confidence 666666666666666666 56666666666666666666665 555555444444 5
Q ss_pred EEECCCCCCCCCCCCCcC---------CCCCccEEeccccccCCCCCCcccCCCccccccccCcccccccccccCCCCCh
Q 039533 165 ILNLGSNHLTGSIPSSLG---------NLSSIHTISLAYNNLDGTIPNSFGWFENLVFLSLAANNLSVVENKLTGEVPSL 235 (949)
Q Consensus 165 ~L~Ls~N~l~~~~p~~~~---------~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~l~~~~~~l 235 (949)
+|+|++|.+.+.+|..++ ++++|++|+|++|+++ .+|..++.+++|++|+|++|.++.
T Consensus 154 ~L~L~~n~~~~~~p~~~~~~~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~------------ 220 (328)
T 4fcg_A 154 ELSIRACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSA------------ 220 (328)
T ss_dssp EEEEEEETTCCCCCSCSEEEC-CCCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCC------------
T ss_pred EEECCCCCCccccChhHhhccchhhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCc------------
Confidence 555555555445554443 3566666666666665 555555555555555555444332
Q ss_pred hhhccccccccccCCCCCCCCCCcchhccccccCcccEEEccCCCCCccCCchhhcccccccEEEccCccccCCCCCCCC
Q 039533 236 EKLQRLQHFTITSNSLGSGGNDDLSFLCSLTNATRLTWMHINSNNFGGLLPGCISNLSKTIKTLFLNNNKIYGSIPAGIG 315 (949)
Q Consensus 236 ~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~~~~L~~L~L~~N~l~~~~p~~~~~l~~~L~~L~L~~N~l~~~~~~~~~ 315 (949)
+|..+..+ ++|++|+|++|++.+.+|..++
T Consensus 221 -------------------------------------------------l~~~l~~l-~~L~~L~Ls~n~~~~~~p~~~~ 250 (328)
T 4fcg_A 221 -------------------------------------------------LGPAIHHL-PKLEELDLRGCTALRNYPPIFG 250 (328)
T ss_dssp -------------------------------------------------CCGGGGGC-TTCCEEECTTCTTCCBCCCCTT
T ss_pred -------------------------------------------------CchhhccC-CCCCEEECcCCcchhhhHHHhc
Confidence 12223333 2355666666666666666666
Q ss_pred CCCcccEEEeecceecccCCCcccccCCCCEEecCCcccccccCcccccccccceeeccccccc
Q 039533 316 NFVNLQRLDMWNNQLSGTIPPAIGELQNLKILGLNRNKLSGNIPPSIGNLKMLLNLFLNDNFLE 379 (949)
Q Consensus 316 ~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 379 (949)
.+++|++|+|++|.+.+.+|..+.++++|+.|+|++|++.+.+|..++++++|+.+++..|.+.
T Consensus 251 ~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~iP~~l~~L~~L~~l~l~~~~~~ 314 (328)
T 4fcg_A 251 GRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQLPANCIILVPPHLQA 314 (328)
T ss_dssp CCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCCCGGGGGSCTTCEEECCGGGSC
T ss_pred CCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCchhhccHHHhhccCceEEeCCHHHHH
Confidence 6666666666666666666666666666666666666666666666666666666666655543
No 285
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=100.00 E-value=1.4e-35 Score=339.31 Aligned_cols=256 Identities=20% Similarity=0.235 Sum_probs=181.6
Q ss_pred CCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCCcchHHHHHHHHHHHhc-CCCcceeEEeeeecccccCCcccee
Q 039533 627 GFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHGASRSFIAECKALKSI-RHRNLVKVLTACLGADYRGNDFKAS 705 (949)
Q Consensus 627 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~~l 705 (949)
.|.+.++||+|+||+||.+... +++.||||++.... .+.+.+|+++++++ +||||+++++++.... ..++
T Consensus 16 ~~~~~~~LG~G~~g~V~~~~~~-~g~~vAvK~~~~~~---~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~-----~~~l 86 (434)
T 2rio_A 16 LVVSEKILGYGSSGTVVFQGSF-QGRPVAVKRMLIDF---CDIALMEIKLLTESDDHPNVIRYYCSETTDR-----FLYI 86 (434)
T ss_dssp CEEEEEEEEECSTTCEEEEEES-SSSEEEEEEEEGGG---HHHHHHHHHHHHHHTTSTTBCCEEEEEECSS-----EEEE
T ss_pred eeeccCeEeeCCCeEEEEEEEE-CCeEEEEEEEcHHH---HHHHHHHHHHHHhccCCCCcCeEEEEEecCC-----eEEE
Confidence 3445688999999999876544 68999999986432 35678999999987 8999999999875443 7899
Q ss_pred EeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCC--------
Q 039533 706 VYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDY-------- 777 (949)
Q Consensus 706 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~-------- 777 (949)
||||+. |+|.+++....... ......++..++.++.||+.||+|||++ +|+||||||+||+++.+
T Consensus 87 v~E~~~-gsL~~~l~~~~~~~---~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~~~~~~~ 159 (434)
T 2rio_A 87 ALELCN-LNLQDLVESKNVSD---ENLKLQKEYNPISLLRQIASGVAHLHSL---KIIHRDLKPQNILVSTSSRFTADQQ 159 (434)
T ss_dssp EECCCS-EEHHHHHHTC---------------CCHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEECCHHHHSCCT
T ss_pred EEecCC-CCHHHHHhccCCCc---hhhhhccchhHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCcccccccc
Confidence 999996 69999997322110 0111123445678999999999999987 99999999999999754
Q ss_pred -----CceEEeecccceecCCCCCcc--ccccccCccCccCccccCC-------CccCCccchHHHHHHHHHHHh-CCCC
Q 039533 778 -----MTARVGDFGLARILSPDHTQT--SSFSVKGSLGYIAPEYGVG-------CEVSTNGDVYSYGILLLELVI-GKKP 842 (949)
Q Consensus 778 -----~~~kl~DfG~a~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~-------~~~~~~sDiwSlGvvl~ellt-g~~P 842 (949)
+.+||+|||+++......... ......||+.|+|||++.+ ..++.++|||||||++|||+| |+.|
T Consensus 160 ~~~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~P 239 (434)
T 2rio_A 160 TGAENLRILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHP 239 (434)
T ss_dssp TCCCSCEEEECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCT
T ss_pred cCCCceEEEEcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCC
Confidence 489999999999876543211 1123469999999999875 568999999999999999999 9999
Q ss_pred CccccccCchhhhhccccCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHH
Q 039533 843 IDIMFEGDINLHNFGRKALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMT 922 (949)
Q Consensus 843 f~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ 922 (949)
|.......... ........ .. ... .....+..+.+++.+|++.||++|||+.
T Consensus 240 f~~~~~~~~~i---~~~~~~~~-------~~-~~~-----------------~~~~~~~~~~~li~~~L~~dP~~Rps~~ 291 (434)
T 2rio_A 240 FGDKYSRESNI---IRGIFSLD-------EM-KCL-----------------HDRSLIAEATDLISQMIDHDPLKRPTAM 291 (434)
T ss_dssp TCSTTTHHHHH---HHTCCCCC-------CC-TTC-----------------CCHHHHHHHHHHHHHHTCSSGGGSCCHH
T ss_pred CCCchhhHHHH---hcCCCCcc-------cc-ccc-----------------ccccchHHHHHHHHHHhhCChhhCCCHH
Confidence 96432211111 00000000 00 000 0124566789999999999999999999
Q ss_pred HHHH
Q 039533 923 NVVH 926 (949)
Q Consensus 923 ev~~ 926 (949)
||++
T Consensus 292 eil~ 295 (434)
T 2rio_A 292 KVLR 295 (434)
T ss_dssp HHHT
T ss_pred HHHh
Confidence 9975
No 286
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=100.00 E-value=1.1e-35 Score=326.73 Aligned_cols=253 Identities=22% Similarity=0.233 Sum_probs=177.3
Q ss_pred hcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCCcc--hHHHHHHHHHHHhcCCCcceeEEeeeecccccCCcc
Q 039533 625 TSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHGA--SRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDF 702 (949)
Q Consensus 625 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 702 (949)
.++|++.+.||+|+||.||+|++..+++.||||++....... .+.+..+..+++.++||||+++++++...+ .
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~-----~ 98 (318)
T 2dyl_A 24 INDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNT-----D 98 (318)
T ss_dssp GGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSS-----E
T ss_pred hccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCC-----c
Confidence 467888999999999999999999889999999997554322 233445555788889999999999986544 7
Q ss_pred ceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEE
Q 039533 703 KASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARV 782 (949)
Q Consensus 703 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl 782 (949)
.++||||+ ++.+..+.. .....+++..+..++.|++.||+|||+++ +|+||||||+||+++.++.+||
T Consensus 99 ~~lv~e~~-~~~~~~l~~---------~~~~~~~~~~~~~~~~~i~~~l~~lH~~~--~i~H~dlkp~Nil~~~~~~~kl 166 (318)
T 2dyl_A 99 VFIAMELM-GTCAEKLKK---------RMQGPIPERILGKMTVAIVKALYYLKEKH--GVIHRDVKPSNILLDERGQIKL 166 (318)
T ss_dssp EEEEECCC-SEEHHHHHH---------HHTSCCCHHHHHHHHHHHHHHHHHHHHHH--CCCCCCCCGGGEEECTTSCEEE
T ss_pred EEEEEecc-CCcHHHHHH---------HhccCCCHHHHHHHHHHHHHHHHHHHhhC--CEEeCCCCHHHEEECCCCCEEE
Confidence 89999999 455555543 12346899999999999999999999732 8999999999999999999999
Q ss_pred eecccceecCCCCCccccccccCccCccCccccC-----CCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhc
Q 039533 783 GDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGV-----GCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFG 857 (949)
Q Consensus 783 ~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~ 857 (949)
+|||.+.......... ...||+.|+|||++. +..++.++|||||||++|||++|+.||..............
T Consensus 167 ~dfg~~~~~~~~~~~~---~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~ 243 (318)
T 2dyl_A 167 CDFGISGRLVDDKAKD---RSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVL 243 (318)
T ss_dssp CCCTTC-----------------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHH
T ss_pred EECCCchhccCCcccc---ccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCccHHHHHHHh
Confidence 9999997765433221 345899999999984 45688999999999999999999999964321111111110
Q ss_pred cccCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 039533 858 RKALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVH 926 (949)
Q Consensus 858 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 926 (949)
.... +.... ....+..+.+++.+||+.||++|||++|+++
T Consensus 244 ~~~~---------~~~~~--------------------~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (318)
T 2dyl_A 244 QEEP---------PLLPG--------------------HMGFSGDFQSFVKDCLTKDHRKRPKYNKLLE 283 (318)
T ss_dssp HSCC---------CCCCS--------------------SSCCCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred ccCC---------CCCCc--------------------cCCCCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence 0000 00000 0012446789999999999999999999976
No 287
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=100.00 E-value=4.5e-35 Score=333.94 Aligned_cols=249 Identities=21% Similarity=0.267 Sum_probs=179.5
Q ss_pred cCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCCcchHHHHHHHHHHHhc-CCCcceeEEeeeecccccCCccce
Q 039533 626 SGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHGASRSFIAECKALKSI-RHRNLVKVLTACLGADYRGNDFKA 704 (949)
Q Consensus 626 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~~ 704 (949)
.+|.+.++||+|+||+||.... .+++.||||++..... ..+.+|+++++++ +||||+++++++.+.. ..+
T Consensus 24 ~~y~~~~~LG~G~~G~V~~~~~-~~~~~vAvK~~~~~~~---~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~-----~~~ 94 (432)
T 3p23_A 24 ISFCPKDVLGHGAEGTIVYRGM-FDNRDVAVKRILPECF---SFADREVQLLRESDEHPNVIRYFCTEKDRQ-----FQY 94 (432)
T ss_dssp EEEEEEEEEEECGGGCEEEEEE-SSSSEEEEEEECTTTE---EECHHHHHHHHHSCCCTTBCCEEEEEEETT-----EEE
T ss_pred EEEecCCeeecCcCEEEEEEEE-eCCeEEEEEEECHHHH---HHHHHHHHHHHhccCCCCcCeEEEEEecCC-----EEE
Confidence 4578889999999999764433 3688999999865432 2356899999999 7999999999876544 789
Q ss_pred eEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecC-----CCc
Q 039533 705 SVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDD-----YMT 779 (949)
Q Consensus 705 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~-----~~~ 779 (949)
+||||+. |+|.+++.... ......++..++.||+.||+|||++ +|+||||||+||+++. ...
T Consensus 95 lv~E~~~-g~L~~~l~~~~---------~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NIll~~~~~~~~~~ 161 (432)
T 3p23_A 95 IAIELCA-ATLQEYVEQKD---------FAHLGLEPITLLQQTTSGLAHLHSL---NIVHRDLKPHNILISMPNAHGKIK 161 (432)
T ss_dssp EEEECCS-EEHHHHHHSSS---------CCCCSSCHHHHHHHHHHHHHHHHHT---TCCCCCCSTTSEEECCCBTTTBCC
T ss_pred EEEECCC-CCHHHHHHhcC---------CCccchhHHHHHHHHHHHHHHHHHC---cCEeCCCCHHHEEEecCCCCCcee
Confidence 9999996 59999997321 2233445678999999999999988 8999999999999953 346
Q ss_pred eEEeecccceecCCCCC-ccccccccCccCccCccccC---CCccCCccchHHHHHHHHHHHh-CCCCCccccccCchhh
Q 039533 780 ARVGDFGLARILSPDHT-QTSSFSVKGSLGYIAPEYGV---GCEVSTNGDVYSYGILLLELVI-GKKPIDIMFEGDINLH 854 (949)
Q Consensus 780 ~kl~DfG~a~~~~~~~~-~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDiwSlGvvl~ellt-g~~Pf~~~~~~~~~~~ 854 (949)
+||+|||+|+....... ........||+.|+|||++. +..++.++|||||||++|||++ |..||..........
T Consensus 162 ~kL~DFG~a~~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~~~~~- 240 (432)
T 3p23_A 162 AMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANI- 240 (432)
T ss_dssp EEECCTTEEECC------------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTHHHHH-
T ss_pred EEEecccceeeccCCCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHHHHHH-
Confidence 88999999987754432 12222456999999999987 4567889999999999999999 999985332111000
Q ss_pred hhccccCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 039533 855 NFGRKALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVH 926 (949)
Q Consensus 855 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 926 (949)
. ....... ...+ .......+.+++.+|++.||++|||++||++
T Consensus 241 --~---~~~~~~~----~~~~--------------------~~~~~~~~~~li~~~L~~dP~~Rps~~evl~ 283 (432)
T 3p23_A 241 --L---LGACSLD----CLHP--------------------EKHEDVIARELIEKMIAMDPQKRPSAKHVLK 283 (432)
T ss_dssp --H---TTCCCCT----TSCT--------------------TCHHHHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred --H---hccCCcc----ccCc--------------------cccccHHHHHHHHHHHhCCHhhCCCHHHHHh
Confidence 0 0000000 0000 0123445788999999999999999999983
No 288
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=100.00 E-value=1e-34 Score=351.52 Aligned_cols=246 Identities=20% Similarity=0.257 Sum_probs=196.2
Q ss_pred cCCCCCCeeeeecCceEEEEEEcC-CCEEEEEEEEecCCC-cchHHHHHHHHHHHhcCCCcceeEEeeeecccccCCccc
Q 039533 626 SGFSSANLVGVGSFGSVYKGIIDE-GRTTIAVKVFNLQHH-GASRSFIAECKALKSIRHRNLVKVLTACLGADYRGNDFK 703 (949)
Q Consensus 626 ~~y~~~~~lg~G~~g~Vy~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 703 (949)
++|++.+.||+|+||.||+|++.. +++.||||++..... .....+.+|+.++++++||||+++++++...+..+....
T Consensus 80 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~ 159 (681)
T 2pzi_A 80 GQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPVG 159 (681)
T ss_dssp TTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEEE
T ss_pred CceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCcee
Confidence 689999999999999999999975 689999999864332 334578899999999999999999999876553233336
Q ss_pred eeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEe
Q 039533 704 ASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVG 783 (949)
Q Consensus 704 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~ 783 (949)
++||||+++++|.+++. ..+++.+++.|+.||+.||+|||++ +|+||||||+||+++.+ .+||+
T Consensus 160 ~lv~E~~~g~~L~~~~~------------~~l~~~~~~~~~~qi~~aL~~lH~~---giiHrDlkp~NIll~~~-~~kl~ 223 (681)
T 2pzi_A 160 YIVMEYVGGQSLKRSKG------------QKLPVAEAIAYLLEILPALSYLHSI---GLVYNDLKPENIMLTEE-QLKLI 223 (681)
T ss_dssp EEEEECCCCEECC----------------CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECSS-CEEEC
T ss_pred EEEEEeCCCCcHHHHHh------------CCCCHHHHHHHHHHHHHHHHHHHHC---CCeecccChHHeEEeCC-cEEEE
Confidence 99999999999988775 2589999999999999999999988 89999999999999985 99999
Q ss_pred ecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhccccCCC
Q 039533 784 DFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRKALPD 863 (949)
Q Consensus 784 DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~ 863 (949)
|||+++..... ....||+.|+|||++.+. ++.++|||||||++|||++|.+||....... .+
T Consensus 224 DFG~a~~~~~~------~~~~gt~~y~aPE~~~~~-~~~~sDi~slG~~l~~l~~g~~~~~~~~~~~----------~~- 285 (681)
T 2pzi_A 224 DLGAVSRINSF------GYLYGTPGFQAPEIVRTG-PTVATDIYTVGRTLAALTLDLPTRNGRYVDG----------LP- 285 (681)
T ss_dssp CCTTCEETTCC------SCCCCCTTTSCTTHHHHC-SCHHHHHHHHHHHHHHHHSCCCEETTEECSS----------CC-
T ss_pred ecccchhcccC------CccCCCccccCHHHHcCC-CCCceehhhhHHHHHHHHhCCCCCccccccc----------cc-
Confidence 99999876543 134599999999998764 4889999999999999999998875321110 00
Q ss_pred chhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCC-CHHHHHHHHHHhHH
Q 039533 864 DVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRT-NMTNVVHELQSIKN 933 (949)
Q Consensus 864 ~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-s~~ev~~~L~~i~~ 933 (949)
...+ .......+.+++.+|++.||++|| +++++.+.+..+..
T Consensus 286 ----------~~~~------------------~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~~ 328 (681)
T 2pzi_A 286 ----------EDDP------------------VLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTGVLR 328 (681)
T ss_dssp ----------TTCH------------------HHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHHH
T ss_pred ----------cccc------------------ccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHHHHHH
Confidence 0000 112345688999999999999999 57777777777643
No 289
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00 E-value=6.2e-35 Score=331.76 Aligned_cols=251 Identities=15% Similarity=0.093 Sum_probs=180.7
Q ss_pred cCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCC---cchHHHHHHHHHHHhcCC-CcceeEE---------eee
Q 039533 626 SGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHH---GASRSFIAECKALKSIRH-RNLVKVL---------TAC 692 (949)
Q Consensus 626 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h-~niv~~~---------~~~ 692 (949)
..|...++||+|+||.||+|++..+++.||||+++.... ...+.+.+|+.+++.++| +|...+. ...
T Consensus 78 ~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 157 (413)
T 3dzo_A 78 RTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLV 157 (413)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEEE
T ss_pred eeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhhc
Confidence 346677899999999999999998999999999874332 235789999999999987 3221111 111
Q ss_pred ------------ecccccCCccceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCC
Q 039533 693 ------------LGADYRGNDFKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQP 760 (949)
Q Consensus 693 ------------~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~ 760 (949)
...........+++|+++ +++|.+++...... ......+++..++.++.|+++||+|||++
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~---~~~~~~l~~~~~~~i~~qi~~aL~~LH~~--- 230 (413)
T 3dzo_A 158 KDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSH---SSTHKSLVHHARLQLTLQVIRLLASLHHY--- 230 (413)
T ss_dssp ECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHH---TTTSHHHHHHHHHHHHHHHHHHHHHHHHT---
T ss_pred ccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcc---cccCCCCCHHHHHHHHHHHHHHHHHHHhC---
Confidence 000000012345666655 68999988411000 01234578889999999999999999987
Q ss_pred CeEecCCCCCCeeecCCCceEEeecccceecCCCCCccccccccCccCccCcccc----------CCCccCCccchHHHH
Q 039533 761 VTAHCDLKPSNVLLDDYMTARVGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYG----------VGCEVSTNGDVYSYG 830 (949)
Q Consensus 761 ~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~----------~~~~~~~~sDiwSlG 830 (949)
+|+||||||+|||++.++.+||+|||+++..... .....| +.|+|||++ .+..++.++||||||
T Consensus 231 ~iiHrDiKp~NILl~~~~~~kL~DFG~a~~~~~~-----~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlG 304 (413)
T 3dzo_A 231 GLVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGAS-----AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLG 304 (413)
T ss_dssp TEECSCCCGGGEEECTTCCEEECCGGGCEETTEE-----ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHH
T ss_pred CcccCCcccceEEEecCCeEEEEeccceeecCCc-----cccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHH
Confidence 9999999999999999999999999999875433 123457 999999998 666789999999999
Q ss_pred HHHHHHHhCCCCCccccccCchhhhhccccCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhcc
Q 039533 831 ILLLELVIGKKPIDIMFEGDINLHNFGRKALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVAC 910 (949)
Q Consensus 831 vvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c 910 (949)
|++|||++|+.||........ ...++... ...+..+.+++.+|
T Consensus 305 vil~elltg~~Pf~~~~~~~~-------------~~~~~~~~------------------------~~~~~~~~~li~~~ 347 (413)
T 3dzo_A 305 LAIYWIWCADLPNTDDAALGG-------------SEWIFRSC------------------------KNIPQPVRALLEGF 347 (413)
T ss_dssp HHHHHHHHSSCCCCTTGGGSC-------------SGGGGSSC------------------------CCCCHHHHHHHHHH
T ss_pred HHHHHHHHCCCCCCCcchhhh-------------HHHHHhhc------------------------ccCCHHHHHHHHHH
Confidence 999999999999964321110 00011000 01234688999999
Q ss_pred ccCCCCCCCCHHHHHH
Q 039533 911 SMELPQDRTNMTNVVH 926 (949)
Q Consensus 911 l~~dP~~RPs~~ev~~ 926 (949)
|+.||++||++.|+++
T Consensus 348 l~~dP~~Rpt~~~~l~ 363 (413)
T 3dzo_A 348 LRYPKEDRLLPLQAME 363 (413)
T ss_dssp TCSSGGGSCCHHHHTT
T ss_pred ccCChhhCcCHHHHHh
Confidence 9999999999877743
No 290
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=100.00 E-value=1.4e-33 Score=313.92 Aligned_cols=168 Identities=23% Similarity=0.327 Sum_probs=92.8
Q ss_pred ccEEEccCccccCCCCCCCCCCCcccEEEeecceecccCCCcccccCCCCEEecCCcccccccCcccccccccceeeccc
Q 039533 296 IKTLFLNNNKIYGSIPAGIGNFVNLQRLDMWNNQLSGTIPPAIGELQNLKILGLNRNKLSGNIPPSIGNLKMLLNLFLND 375 (949)
Q Consensus 296 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 375 (949)
|++|++++|++++..+ +..+++|++|++++|.+++..+ +..+++|+.|+|++|++++..+ +..+++|++|++++
T Consensus 179 L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~ 252 (347)
T 4fmz_A 179 LYSLSLNYNQIEDISP--LASLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKITDLSP--LANLSQLTWLEIGT 252 (347)
T ss_dssp CSEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCS
T ss_pred CCEEEccCCccccccc--ccCCCccceeecccCCCCCCch--hhcCCcCCEEEccCCccCCCcc--hhcCCCCCEEECCC
Confidence 4455555555443222 4455555555555555553332 4555555555555555553222 44555555555555
Q ss_pred ccccccCCCCCCCCCCCcEEEeeCccccCCCCCcccCCcccceeeccCCCccCCCCccccccccccceeeeccccccccC
Q 039533 376 NFLEVSIPSSLGQCESLIEINLSNNNLSGTIPPQFFSLSSLSISLDWSRNKLTGSLPIEVGKLKILEFLYVYENRLEGEI 455 (949)
Q Consensus 376 N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~l~~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 455 (949)
|.+++. +.+..+++|++|++++|+++ +. ..+..+++|+.|++++|++++..
T Consensus 253 n~l~~~--~~~~~l~~L~~L~l~~n~l~-------------------------~~--~~~~~l~~L~~L~L~~n~l~~~~ 303 (347)
T 4fmz_A 253 NQISDI--NAVKDLTKLKMLNVGSNQIS-------------------------DI--SVLNNLSQLNSLFLNNNQLGNED 303 (347)
T ss_dssp SCCCCC--GGGTTCTTCCEEECCSSCCC-------------------------CC--GGGGGCTTCSEEECCSSCCCGGG
T ss_pred CccCCC--hhHhcCCCcCEEEccCCccC-------------------------CC--hhhcCCCCCCEEECcCCcCCCcC
Confidence 555432 23444555555555555544 22 23555666667777777776666
Q ss_pred CcccccccchhhcccCccccccccCCCcCCCCCCCEEECCCCcCC
Q 039533 456 PSTFGNCIRLEQLGMGGNLFQGPISSSLGSLRGLRVLDLSQNNLS 500 (949)
Q Consensus 456 p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 500 (949)
|..|+.+++|+.|++++|++++..| +..+++|+.|++++|.|+
T Consensus 304 ~~~l~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~N~i~ 346 (347)
T 4fmz_A 304 MEVIGGLTNLTTLFLSQNHITDIRP--LASLSKMDSADFANQVIK 346 (347)
T ss_dssp HHHHHTCTTCSEEECCSSSCCCCGG--GGGCTTCSEESSSCC---
T ss_pred hhHhhccccCCEEEccCCccccccC--hhhhhccceeehhhhccc
Confidence 6666777777777777777776555 667777777777777764
No 291
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=100.00 E-value=1.3e-33 Score=314.25 Aligned_cols=305 Identities=22% Similarity=0.352 Sum_probs=199.5
Q ss_pred cCCCCCcEEECCCCCCCCCCCCCcCCCCCccEEeccccccCCCCCCcccCCCccccccccCcccccccccccCCCCChhh
Q 039533 158 SSLSKTEILNLGSNHLTGSIPSSLGNLSSIHTISLAYNNLDGTIPNSFGWFENLVFLSLAANNLSVVENKLTGEVPSLEK 237 (949)
Q Consensus 158 ~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~l~~~~~~l~~ 237 (949)
..+++|+.|++++|.++ .+| .+..+++|++|+|++|++++. +. +..+++|++|+|++|.++.+ +.+..
T Consensus 41 ~~l~~L~~L~l~~~~i~-~~~-~~~~~~~L~~L~l~~n~i~~~-~~-~~~l~~L~~L~L~~n~i~~~--------~~~~~ 108 (347)
T 4fmz_A 41 EELESITKLVVAGEKVA-SIQ-GIEYLTNLEYLNLNGNQITDI-SP-LSNLVKLTNLYIGTNKITDI--------SALQN 108 (347)
T ss_dssp HHHTTCSEEECCSSCCC-CCT-TGGGCTTCCEEECCSSCCCCC-GG-GTTCTTCCEEECCSSCCCCC--------GGGTT
T ss_pred hhcccccEEEEeCCccc-cch-hhhhcCCccEEEccCCccccc-hh-hhcCCcCCEEEccCCcccCc--------hHHcC
Confidence 34555566666666665 333 255566666666666666533 22 55666666666666655432 12333
Q ss_pred hccccccccccCCCCCCCCCCcchhccccccCcccEEEccCCCCCccCCchhhcccccccEEEccCccccCCCCCCCCCC
Q 039533 238 LQRLQHFTITSNSLGSGGNDDLSFLCSLTNATRLTWMHINSNNFGGLLPGCISNLSKTIKTLFLNNNKIYGSIPAGIGNF 317 (949)
Q Consensus 238 l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~~~~L~~L~L~~N~l~~~~p~~~~~l~~~L~~L~L~~N~l~~~~~~~~~~l 317 (949)
+++|++|++++|++ ++..+ +..+ ++|++|++++|.....++ .+..+
T Consensus 109 l~~L~~L~l~~n~i------------------------------~~~~~--~~~l-~~L~~L~l~~n~~~~~~~-~~~~l 154 (347)
T 4fmz_A 109 LTNLRELYLNEDNI------------------------------SDISP--LANL-TKMYSLNLGANHNLSDLS-PLSNM 154 (347)
T ss_dssp CTTCSEEECTTSCC------------------------------CCCGG--GTTC-TTCCEEECTTCTTCCCCG-GGTTC
T ss_pred CCcCCEEECcCCcc------------------------------cCchh--hccC-CceeEEECCCCCCccccc-chhhC
Confidence 33333333333333 32211 2222 235555555554432322 26666
Q ss_pred CcccEEEeecceecccCCCcccccCCCCEEecCCcccccccCcccccccccceeecccccccccCCCCCCCCCCCcEEEe
Q 039533 318 VNLQRLDMWNNQLSGTIPPAIGELQNLKILGLNRNKLSGNIPPSIGNLKMLLNLFLNDNFLEVSIPSSLGQCESLIEINL 397 (949)
Q Consensus 318 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l 397 (949)
++|++|++++|.+.+..+ +..+++|+.|++++|++++..+ +..+++|+.|++++|.+++..+ +..+++|++|++
T Consensus 155 ~~L~~L~l~~~~~~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l 228 (347)
T 4fmz_A 155 TGLNYLTVTESKVKDVTP--IANLTDLYSLSLNYNQIEDISP--LASLTSLHYFTAYVNQITDITP--VANMTRLNSLKI 228 (347)
T ss_dssp TTCCEEECCSSCCCCCGG--GGGCTTCSEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GGGCTTCCEEEC
T ss_pred CCCcEEEecCCCcCCchh--hccCCCCCEEEccCCccccccc--ccCCCccceeecccCCCCCCch--hhcCCcCCEEEc
Confidence 677777777777664333 6667777777777777764322 6667777777777777765443 666777777777
Q ss_pred eCccccCCCCCcccCCcccceeeccCCCccCCCCccccccccccceeeeccccccccCCcccccccchhhcccCcccccc
Q 039533 398 SNNNLSGTIPPQFFSLSSLSISLDWSRNKLTGSLPIEVGKLKILEFLYVYENRLEGEIPSTFGNCIRLEQLGMGGNLFQG 477 (949)
Q Consensus 398 ~~N~l~~~~p~~~~~l~~l~~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~ 477 (949)
++|++++ +|. +..++++ +.|++++|.+++. ..+..+++|++|++++|++++. +.+..+++|+.|++++|++++
T Consensus 229 ~~n~l~~-~~~-~~~l~~L-~~L~l~~n~l~~~--~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~L~~n~l~~ 301 (347)
T 4fmz_A 229 GNNKITD-LSP-LANLSQL-TWLEIGTNQISDI--NAVKDLTKLKMLNVGSNQISDI--SVLNNLSQLNSLFLNNNQLGN 301 (347)
T ss_dssp CSSCCCC-CGG-GTTCTTC-CEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCG
T ss_pred cCCccCC-Ccc-hhcCCCC-CEEECCCCccCCC--hhHhcCCCcCEEEccCCccCCC--hhhcCCCCCCEEECcCCcCCC
Confidence 7777763 333 6667777 6777777777753 4678899999999999999964 468999999999999999999
Q ss_pred ccCCCcCCCCCCCEEECCCCcCCCcCcccccCCc-cceEeCCCCcCc
Q 039533 478 PISSSLGSLRGLRVLDLSQNNLSGEIPKFLAGLS-LNNLNLSYNDLE 523 (949)
Q Consensus 478 ~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~-L~~l~ls~N~l~ 523 (949)
..|..|+.+++|+.|+|++|++++.+| +..++ |+.|++++|+++
T Consensus 302 ~~~~~l~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~N~i~ 346 (347)
T 4fmz_A 302 EDMEVIGGLTNLTTLFLSQNHITDIRP--LASLSKMDSADFANQVIK 346 (347)
T ss_dssp GGHHHHHTCTTCSEEECCSSSCCCCGG--GGGCTTCSEESSSCC---
T ss_pred cChhHhhccccCCEEEccCCccccccC--hhhhhccceeehhhhccc
Confidence 999999999999999999999998777 55555 999999999986
No 292
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=100.00 E-value=1.3e-33 Score=307.08 Aligned_cols=236 Identities=18% Similarity=0.223 Sum_probs=179.7
Q ss_pred hcCCCCC-CeeeeecCceEEEEEEcCCCEEEEEEEEecCCCcchHHHHHHHHHH-HhcCCCcceeEEeeeecccccCCcc
Q 039533 625 TSGFSSA-NLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHGASRSFIAECKAL-KSIRHRNLVKVLTACLGADYRGNDF 702 (949)
Q Consensus 625 ~~~y~~~-~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l-~~l~h~niv~~~~~~~~~~~~~~~~ 702 (949)
.++|.+. +.||+|+||.||+|.+..+++.||+|+++. ...+.+|++++ +..+||||+++++++.... .+...
T Consensus 16 ~~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~-----~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~-~~~~~ 89 (299)
T 3m2w_A 16 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENLY-AGRKC 89 (299)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEE-TTEEE
T ss_pred ccchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEecc-----cHHHHHHHHHHHHhccCCCchhHHhhhhhhc-CCCce
Confidence 3567776 789999999999999988999999999863 35677899888 5558999999999976421 23447
Q ss_pred ceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecC---CCc
Q 039533 703 KASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDD---YMT 779 (949)
Q Consensus 703 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~---~~~ 779 (949)
.++||||+++|+|.+++... ....+++..+..++.|++.||+|||++ +|+||||||+||+++. ++.
T Consensus 90 ~~lv~e~~~~~~L~~~l~~~--------~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~ 158 (299)
T 3m2w_A 90 LLIVMECLDGGELFSRIQDR--------GDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAI 158 (299)
T ss_dssp EEEEECCCCSCBHHHHHHHC--------TTCCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCC
T ss_pred EEEEEeecCCCcHHHHHHhc--------cCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEecCCCCCc
Confidence 89999999999999999731 224589999999999999999999987 8999999999999997 789
Q ss_pred eEEeecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCCccccccCchhhhhccc
Q 039533 780 ARVGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEGDINLHNFGRK 859 (949)
Q Consensus 780 ~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~ 859 (949)
+||+|||++.... +..++.++|||||||++|||++|+.||.........
T Consensus 159 ~kl~Dfg~a~~~~------------------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~------- 207 (299)
T 3m2w_A 159 LKLTDFGFAKETT------------------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAIS------- 207 (299)
T ss_dssp EEECCCTTCEECT------------------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC--------------
T ss_pred EEEeccccccccc------------------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhh-------
Confidence 9999999986532 234678999999999999999999999643211100
Q ss_pred cCCCchhhhcccCCCCCchhhhhhhchhhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 039533 860 ALPDDVMDIVDSSLLPDDEDLILTGNQRQKQARINSIIECLISMVRIGVACSMELPQDRTNMTNVVH 926 (949)
Q Consensus 860 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev~~ 926 (949)
......+.......+ .+.....+..+.+++.+|++.||++|||++|+++
T Consensus 208 ---~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~ 256 (299)
T 3m2w_A 208 ---PGMKTRIRMGQYEFP---------------NPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMN 256 (299)
T ss_dssp ---CCSCCSSCTTCCSSC---------------HHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred ---HHHHHHHhhccccCC---------------chhcccCCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 000000000000000 0011234567889999999999999999999987
No 293
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=100.00 E-value=6.4e-33 Score=306.36 Aligned_cols=126 Identities=24% Similarity=0.314 Sum_probs=74.8
Q ss_pred CceeeccCceeccccCCcccCcccCcEEeeccccccCcCCCCCCCCccceeecCCCccccccccccccCCCCCcEEECCC
Q 039533 91 LKQLYLQVNSFTHEIPSEIGGLRRLKVLALNNNSICGEIPTNISRCSTLIPIHPQNNQLVGKILSRFSSLSKTEILNLGS 170 (949)
Q Consensus 91 L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~L~~L~~L~Ls~ 170 (949)
++.+++++|.++ .+|..+. ++|++|+|++|.+++..|..|+++++|++|++++|++++..+..|.++++|++|+|++
T Consensus 35 l~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~ 111 (332)
T 2ft3_A 35 LRVVQCSDLGLK-AVPKEIS--PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISK 111 (332)
T ss_dssp TTEEECCSSCCS-SCCSCCC--TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECCS
T ss_pred CCEEECCCCCcc-ccCCCCC--CCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECCC
Confidence 444555555544 4444432 4555555555555544445555555555555555555555566666666667777777
Q ss_pred CCCCCCCCCCcCCCCCccEEeccccccCCCCCCcccCCCccccccccCcccc
Q 039533 171 NHLTGSIPSSLGNLSSIHTISLAYNNLDGTIPNSFGWFENLVFLSLAANNLS 222 (949)
Q Consensus 171 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 222 (949)
|.++ .+|..+. ++|++|+|++|++++..+..|..+++|++|++++|.++
T Consensus 112 n~l~-~l~~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~ 160 (332)
T 2ft3_A 112 NHLV-EIPPNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLE 160 (332)
T ss_dssp SCCC-SCCSSCC--TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCB
T ss_pred CcCC-ccCcccc--ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccc
Confidence 7766 4554443 56777777777777555556666666666666666654
No 294
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=100.00 E-value=7.2e-33 Score=305.95 Aligned_cols=83 Identities=19% Similarity=0.312 Sum_probs=50.6
Q ss_pred ccCcEEeeccccccCcCCCCCCCCccceeecCCCccccccccccccCCCCCcEEECCCCCCCCCCCCCcCCCCCccEEec
Q 039533 113 RRLKVLALNNNSICGEIPTNISRCSTLIPIHPQNNQLVGKILSRFSSLSKTEILNLGSNHLTGSIPSSLGNLSSIHTISL 192 (949)
Q Consensus 113 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 192 (949)
.+|+.+++++|.++ .+|..+. ++| ++|+|++|.+++..|..|.++++|++|+|
T Consensus 33 c~l~~l~~~~~~l~-~ip~~~~--~~l------------------------~~L~l~~n~i~~~~~~~~~~l~~L~~L~L 85 (332)
T 2ft3_A 33 CHLRVVQCSDLGLK-AVPKEIS--PDT------------------------TLLDLQNNDISELRKDDFKGLQHLYALVL 85 (332)
T ss_dssp EETTEEECCSSCCS-SCCSCCC--TTC------------------------CEEECCSSCCCEECTTTTTTCTTCCEEEC
T ss_pred ccCCEEECCCCCcc-ccCCCCC--CCC------------------------eEEECCCCcCCccCHhHhhCCCCCcEEEC
Confidence 36888888888887 6776553 344 55555555555444555555666666666
Q ss_pred cccccCCCCCCcccCCCccccccccCcccc
Q 039533 193 AYNNLDGTIPNSFGWFENLVFLSLAANNLS 222 (949)
Q Consensus 193 ~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 222 (949)
++|++++..|..|+++++|++|+|++|+++
T Consensus 86 ~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~ 115 (332)
T 2ft3_A 86 VNNKISKIHEKAFSPLRKLQKLYISKNHLV 115 (332)
T ss_dssp CSSCCCEECGGGSTTCTTCCEEECCSSCCC
T ss_pred CCCccCccCHhHhhCcCCCCEEECCCCcCC
Confidence 666665555555555555555555555544
No 295
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=100.00 E-value=1.5e-32 Score=303.12 Aligned_cols=277 Identities=24% Similarity=0.307 Sum_probs=168.4
Q ss_pred CCCceeeccCceeccccCCcccCcccCcEEeeccccccCcCCCCCCCCccceeecCCCccccccccccccCCCCCcEEEC
Q 039533 89 SFLKQLYLQVNSFTHEIPSEIGGLRRLKVLALNNNSICGEIPTNISRCSTLIPIHPQNNQLVGKILSRFSSLSKTEILNL 168 (949)
Q Consensus 89 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~L~~L~~L~L 168 (949)
+.|++|+|++|++++..+..|+++++|++|+|++|.+++..|..| ..+++|++|+|
T Consensus 52 ~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~------------------------~~l~~L~~L~L 107 (330)
T 1xku_A 52 PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAF------------------------APLVKLERLYL 107 (330)
T ss_dssp TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTT------------------------TTCTTCCEEEC
T ss_pred CCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHh------------------------cCCCCCCEEEC
Confidence 355555555555554444455555555555555555554444444 44445566666
Q ss_pred CCCCCCCCCCCCcCCCCCccEEeccccccCCCCCCcccCCCccccccccCcccccccccccCCCCChhhhcccccccccc
Q 039533 169 GSNHLTGSIPSSLGNLSSIHTISLAYNNLDGTIPNSFGWFENLVFLSLAANNLSVVENKLTGEVPSLEKLQRLQHFTITS 248 (949)
Q Consensus 169 s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~l~~~~~~l~~l~~L~~L~l~~ 248 (949)
++|+++ .+|..+. ++|++|++++|++++..+..|.++++|++|++++|.++...
T Consensus 108 s~n~l~-~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~----------------------- 161 (330)
T 1xku_A 108 SKNQLK-ELPEKMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSG----------------------- 161 (330)
T ss_dssp CSSCCS-BCCSSCC--TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGG-----------------------
T ss_pred CCCcCC-ccChhhc--ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccC-----------------------
Confidence 666665 4444433 56666666666666555555666666666666655543210
Q ss_pred CCCCCCCCCCcchhccccccCcccEEEccCCCCCccCCchhhcccccccEEEccCccccCCCCCCCCCCCcccEEEeecc
Q 039533 249 NSLGSGGNDDLSFLCSLTNATRLTWMHINSNNFGGLLPGCISNLSKTIKTLFLNNNKIYGSIPAGIGNFVNLQRLDMWNN 328 (949)
Q Consensus 249 N~l~~~~~~~~~~~~~l~~~~~L~~L~L~~N~l~~~~p~~~~~l~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N 328 (949)
..+..+..+ ++|++|++++|+++. +|..+. ++|++|+|++|
T Consensus 162 -----------------------------------~~~~~~~~l-~~L~~L~l~~n~l~~-l~~~~~--~~L~~L~l~~n 202 (330)
T 1xku_A 162 -----------------------------------IENGAFQGM-KKLSYIRIADTNITT-IPQGLP--PSLTELHLDGN 202 (330)
T ss_dssp -----------------------------------BCTTGGGGC-TTCCEEECCSSCCCS-CCSSCC--TTCSEEECTTS
T ss_pred -----------------------------------cChhhccCC-CCcCEEECCCCcccc-CCcccc--ccCCEEECCCC
Confidence 112222222 235555555555552 344333 67888888888
Q ss_pred eecccCCCcccccCCCCEEecCCcccccccCcccccccccceeecccccccccCCCCCCCCCCCcEEEeeCccccCCCCC
Q 039533 329 QLSGTIPPAIGELQNLKILGLNRNKLSGNIPPSIGNLKMLLNLFLNDNFLEVSIPSSLGQCESLIEINLSNNNLSGTIPP 408 (949)
Q Consensus 329 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~ 408 (949)
++++..|..|.++++|+.|+|++|++++..+..+.++++|+.|+|++|+++ .+|..+..+++|++|++++|++++..+.
T Consensus 203 ~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~i~~~~~~ 281 (330)
T 1xku_A 203 KITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNISAIGSN 281 (330)
T ss_dssp CCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTTTTTCSSCCEEECCSSCCCCCCTT
T ss_pred cCCccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCc-cCChhhccCCCcCEEECCCCcCCccChh
Confidence 888877888888888888888888888777778888888888888888887 6777888888888888888888744343
Q ss_pred cccCCcccceeeccCCCccCCCCccccccccccceeeeccccccc--cCCcccccccchhhcccCccc
Q 039533 409 QFFSLSSLSISLDWSRNKLTGSLPIEVGKLKILEFLYVYENRLEG--EIPSTFGNCIRLEQLGMGGNL 474 (949)
Q Consensus 409 ~~~~l~~l~~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~l~~N~ 474 (949)
.|..... ......|+.|++++|.+.. ..|..|..+.+|+.++|++|+
T Consensus 282 ~f~~~~~-------------------~~~~~~l~~l~l~~N~~~~~~i~~~~f~~~~~l~~l~L~~N~ 330 (330)
T 1xku_A 282 DFCPPGY-------------------NTKKASYSGVSLFSNPVQYWEIQPSTFRCVYVRAAVQLGNYK 330 (330)
T ss_dssp SSSCSSC-------------------CTTSCCCSEEECCSSSSCGGGSCGGGGTTCCCGGGEEC----
T ss_pred hcCCccc-------------------ccccccccceEeecCcccccccCccccccccceeEEEecccC
Confidence 3332210 0123456666666666642 344555556666666665553
No 296
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=100.00 E-value=2.2e-32 Score=301.80 Aligned_cols=289 Identities=20% Similarity=0.276 Sum_probs=143.0
Q ss_pred ccCcEEeeccccccCcCCCCCCCCccceeecCCCccccccccccccCCCCCcEEECCCCCCCCCCCCCcCCCCCccEEec
Q 039533 113 RRLKVLALNNNSICGEIPTNISRCSTLIPIHPQNNQLVGKILSRFSSLSKTEILNLGSNHLTGSIPSSLGNLSSIHTISL 192 (949)
Q Consensus 113 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 192 (949)
.+|+.++++++.++ .+|..+. ++ |++|+|++|.+++..+..|+++++|++|+|
T Consensus 31 c~l~~l~~~~~~l~-~lp~~~~--~~------------------------l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L 83 (330)
T 1xku_A 31 CHLRVVQCSDLGLE-KVPKDLP--PD------------------------TALLDLQNNKITEIKDGDFKNLKNLHTLIL 83 (330)
T ss_dssp EETTEEECTTSCCC-SCCCSCC--TT------------------------CCEEECCSSCCCCBCTTTTTTCTTCCEEEC
T ss_pred CCCeEEEecCCCcc-ccCccCC--CC------------------------CeEEECCCCcCCEeChhhhccCCCCCEEEC
Confidence 35677777777766 5555442 23 345555555555444445555555555555
Q ss_pred cccccCCCCCCcccCCCccccccccCcccccccccccCCCCChhhhccccccccccCCCCCCCCCCcchhccccccCccc
Q 039533 193 AYNNLDGTIPNSFGWFENLVFLSLAANNLSVVENKLTGEVPSLEKLQRLQHFTITSNSLGSGGNDDLSFLCSLTNATRLT 272 (949)
Q Consensus 193 ~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~l~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~~~~L~ 272 (949)
++|++++..|..|+.+++|++|+|++|+++.++..+ .++|+
T Consensus 84 ~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~l~~~~---------------------------------------~~~L~ 124 (330)
T 1xku_A 84 INNKISKISPGAFAPLVKLERLYLSKNQLKELPEKM---------------------------------------PKTLQ 124 (330)
T ss_dssp CSSCCCCBCTTTTTTCTTCCEEECCSSCCSBCCSSC---------------------------------------CTTCC
T ss_pred CCCcCCeeCHHHhcCCCCCCEEECCCCcCCccChhh---------------------------------------ccccc
Confidence 555555555555555555555555555544322110 01233
Q ss_pred EEEccCCCCCccCCchhhcccccccEEEccCccccC--CCCCCCCCCCcccEEEeecceecccCCCcccccCCCCEEecC
Q 039533 273 WMHINSNNFGGLLPGCISNLSKTIKTLFLNNNKIYG--SIPAGIGNFVNLQRLDMWNNQLSGTIPPAIGELQNLKILGLN 350 (949)
Q Consensus 273 ~L~L~~N~l~~~~p~~~~~l~~~L~~L~L~~N~l~~--~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls 350 (949)
+|++++|++++..+..+..+ ++|++|++++|.++. ..+..+..+++|++|++++|.++ .+|..+. ++|+.|+|+
T Consensus 125 ~L~l~~n~l~~~~~~~~~~l-~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~-~l~~~~~--~~L~~L~l~ 200 (330)
T 1xku_A 125 ELRVHENEITKVRKSVFNGL-NQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNIT-TIPQGLP--PSLTELHLD 200 (330)
T ss_dssp EEECCSSCCCBBCHHHHTTC-TTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCC-SCCSSCC--TTCSEEECT
T ss_pred EEECCCCcccccCHhHhcCC-ccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCccc-cCCcccc--ccCCEEECC
Confidence 44444444443333334443 245566666665532 44555555666666666666655 2343332 455555555
Q ss_pred CcccccccCcccccccccceeecccccccccCCCCCCCCCCCcEEEeeCccccCCCCCcccCCcccceeeccCCCccCCC
Q 039533 351 RNKLSGNIPPSIGNLKMLLNLFLNDNFLEVSIPSSLGQCESLIEINLSNNNLSGTIPPQFFSLSSLSISLDWSRNKLTGS 430 (949)
Q Consensus 351 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~l~~~L~ls~N~l~~~ 430 (949)
+|++++..|..|.++++|+.|+|++|.+++..+..|..+++|++|+|++|+++ .
T Consensus 201 ~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~------------------------- 254 (330)
T 1xku_A 201 GNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-K------------------------- 254 (330)
T ss_dssp TSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-S-------------------------
T ss_pred CCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCc-c-------------------------
Confidence 55555555555555555555555555555544445555555555555555544 3
Q ss_pred CccccccccccceeeeccccccccCCccccc------ccchhhcccCcccccc--ccCCCcCCCCCCCEEECCCC
Q 039533 431 LPIEVGKLKILEFLYVYENRLEGEIPSTFGN------CIRLEQLGMGGNLFQG--PISSSLGSLRGLRVLDLSQN 497 (949)
Q Consensus 431 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~------l~~L~~L~l~~N~l~~--~~~~~~~~l~~L~~L~Ls~N 497 (949)
+|..+..+++|++|++++|+|++..+..|.. ...|+.|++++|.+.. ..|..|..+.+|+.++|++|
T Consensus 255 lp~~l~~l~~L~~L~l~~N~i~~~~~~~f~~~~~~~~~~~l~~l~l~~N~~~~~~i~~~~f~~~~~l~~l~L~~N 329 (330)
T 1xku_A 255 VPGGLADHKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQYWEIQPSTFRCVYVRAAVQLGNY 329 (330)
T ss_dssp CCTTTTTCSSCCEEECCSSCCCCCCTTSSSCSSCCTTSCCCSEEECCSSSSCGGGSCGGGGTTCCCGGGEEC---
T ss_pred CChhhccCCCcCEEECCCCcCCccChhhcCCcccccccccccceEeecCcccccccCccccccccceeEEEeccc
Confidence 3333444445555555555555433333322 2344445555554432 33344444555555555444
No 297
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=100.00 E-value=4.4e-34 Score=316.37 Aligned_cols=196 Identities=18% Similarity=0.155 Sum_probs=160.7
Q ss_pred hcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCC--------cchHHHHHHHHHHHhcC---------CCccee
Q 039533 625 TSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHH--------GASRSFIAECKALKSIR---------HRNLVK 687 (949)
Q Consensus 625 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--------~~~~~~~~E~~~l~~l~---------h~niv~ 687 (949)
.++|++.+.||+|+||+||+|++ +++.||||+++.... ...+.+.+|+.++++++ ||||++
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~--~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~ 96 (336)
T 2vuw_A 19 TEKLQRCEKIGEGVFGEVFQTIA--DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIG 96 (336)
T ss_dssp HHHHHTCEEEEEETTEEEEEEEE--TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCC
T ss_pred cccchheeeecccCceEEEEEEe--CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhh
Confidence 35789999999999999999998 479999999985532 22377899999999886 667766
Q ss_pred EEeeeeccc-------------------------ccCCccceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHH
Q 039533 688 VLTACLGAD-------------------------YRGNDFKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLN 742 (949)
Q Consensus 688 ~~~~~~~~~-------------------------~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~ 742 (949)
+.+.+.... +.+....++||||+++|++.+.+. ...+++.+++.
T Consensus 97 l~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~-----------~~~~~~~~~~~ 165 (336)
T 2vuw_A 97 LNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMR-----------TKLSSLATAKS 165 (336)
T ss_dssp EEEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGT-----------TTCCCHHHHHH
T ss_pred hcceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHH-----------hcCCCHHHHHH
Confidence 666532110 112457899999999998777664 13478999999
Q ss_pred HHHHHHHHHHHHh-hCCCCCeEecCCCCCCeeecCCC--------------------ceEEeecccceecCCCCCccccc
Q 039533 743 IAIDIAYALNYLH-HDCQPVTAHCDLKPSNVLLDDYM--------------------TARVGDFGLARILSPDHTQTSSF 801 (949)
Q Consensus 743 i~~qi~~gL~~LH-~~~~~~ivHrDlkp~NIll~~~~--------------------~~kl~DfG~a~~~~~~~~~~~~~ 801 (949)
|+.||+.||+||| +. +|+||||||+|||++.++ .+||+|||+|+.....
T Consensus 166 i~~qi~~aL~~lH~~~---~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~------- 235 (336)
T 2vuw_A 166 ILHQLTASLAVAEASL---RFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG------- 235 (336)
T ss_dssp HHHHHHHHHHHHHHHH---CCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT-------
T ss_pred HHHHHHHHHHHHHHhC---CEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC-------
Confidence 9999999999999 77 899999999999999887 8999999999876532
Q ss_pred cccCccCccCccccCCCccCCccchHHHHHH-HHHHHhCCCCCc
Q 039533 802 SVKGSLGYIAPEYGVGCEVSTNGDVYSYGIL-LLELVIGKKPID 844 (949)
Q Consensus 802 ~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvv-l~elltg~~Pf~ 844 (949)
...||+.|+|||++.+.. +.++||||+|++ .+++++|..||.
T Consensus 236 ~~~gt~~y~aPE~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~ 278 (336)
T 2vuw_A 236 IVVFCDVSMDEDLFTGDG-DYQFDIYRLMKKENNNRWGEYHPYS 278 (336)
T ss_dssp EEECCCCTTCSGGGCCCS-SHHHHHHHHHHHHHTTCTTSCCTHH
T ss_pred cEEEeecccChhhhcCCC-ccceehhhhhCCCCcccccccCCCc
Confidence 235999999999998766 899999998777 788899999985
No 298
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.97 E-value=2.7e-36 Score=349.88 Aligned_cols=384 Identities=17% Similarity=0.134 Sum_probs=196.6
Q ss_pred CCceeeccCceeccccCC-cccCcccCcEEeeccccccC----cCCCCCCCCccceeecCCCccccccccccc-cCCC--
Q 039533 90 FLKQLYLQVNSFTHEIPS-EIGGLRRLKVLALNNNSICG----EIPTNISRCSTLIPIHPQNNQLVGKILSRF-SSLS-- 161 (949)
Q Consensus 90 ~L~~L~L~~n~l~~~~p~-~~~~l~~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~-~~L~-- 161 (949)
+|++|+|++|+++..... .+..+++|++|+|++|.+++ .+|..+..+++|++|++++|.+....+..+ ..++
T Consensus 4 ~l~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~ 83 (461)
T 1z7x_W 4 DIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQTP 83 (461)
T ss_dssp EEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCST
T ss_pred cceehhhhhcccCchhHHHHHhhcCCccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHHHHHHHHhhC
Confidence 345555555555432222 24445555555555555542 223344444445555555554443322222 2233
Q ss_pred --CCcEEECCCCCCCC----CCCCCcCCCCCccEEeccccccCCCCCCccc-----CCCccccccccCcccccccccccC
Q 039533 162 --KTEILNLGSNHLTG----SIPSSLGNLSSIHTISLAYNNLDGTIPNSFG-----WFENLVFLSLAANNLSVVENKLTG 230 (949)
Q Consensus 162 --~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~-----~l~~L~~L~Ls~N~l~~~~~~l~~ 230 (949)
+|++|+|++|.++. .+|..+..+++|++|+|++|.+++..+..+. ..++|++|+|++|.++.....
T Consensus 84 ~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~--- 160 (461)
T 1z7x_W 84 SCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCE--- 160 (461)
T ss_dssp TCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHH---
T ss_pred CCceeEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHH---
Confidence 45556666555552 3344555555555555555555432222221 123455555554444321100
Q ss_pred CCCChhhhccccccccccCCCCCCCCCCcchhccccccCcccEEEccCCCCCccCCchhhc----ccccccEEEccCccc
Q 039533 231 EVPSLEKLQRLQHFTITSNSLGSGGNDDLSFLCSLTNATRLTWMHINSNNFGGLLPGCISN----LSKTIKTLFLNNNKI 306 (949)
Q Consensus 231 ~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~~~~L~~L~L~~N~l~~~~p~~~~~----l~~~L~~L~L~~N~l 306 (949)
.+...+..+++|++|++++|.++...+..+.. -.++|++|+|++|.+
T Consensus 161 -----------------------------~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l 211 (461)
T 1z7x_W 161 -----------------------------PLASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGV 211 (461)
T ss_dssp -----------------------------HHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCC
T ss_pred -----------------------------HHHHHHhhCCCCCEEECcCCCcchHHHHHHHHHHhcCCCCceEEEccCCCC
Confidence 01112233444555555555544333322221 112466666666666
Q ss_pred cCC----CCCCCCCCCcccEEEeecceecccC-----CCcccccCCCCEEecCCcccccc----cCcccccccccceeec
Q 039533 307 YGS----IPAGIGNFVNLQRLDMWNNQLSGTI-----PPAIGELQNLKILGLNRNKLSGN----IPPSIGNLKMLLNLFL 373 (949)
Q Consensus 307 ~~~----~~~~~~~l~~L~~L~L~~N~l~~~~-----p~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~L 373 (949)
++. ++..+..+++|++|+|++|.+++.. +..+..+++|+.|+|++|++++. ++..+.++++|++|++
T Consensus 212 ~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L 291 (461)
T 1z7x_W 212 TSDNCRDLCGIVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSL 291 (461)
T ss_dssp BTTHHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEEC
T ss_pred cHHHHHHHHHHHHhCCCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEEC
Confidence 542 3444555666666666666665322 22223456666666666666643 4555555666666666
Q ss_pred ccccccccCCCCCCC-----CCCCcEEEeeCccccCCCCCcccCCcccceeeccCCCccCCCCccccccccccceeeecc
Q 039533 374 NDNFLEVSIPSSLGQ-----CESLIEINLSNNNLSGTIPPQFFSLSSLSISLDWSRNKLTGSLPIEVGKLKILEFLYVYE 448 (949)
Q Consensus 374 ~~N~l~~~~p~~~~~-----l~~L~~L~l~~N~l~~~~p~~~~~l~~l~~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 448 (949)
++|.+++..+..+.. .++|++|++++|.+++.... .++..+..+++|++|+|++
T Consensus 292 s~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~---------------------~l~~~l~~~~~L~~L~Ls~ 350 (461)
T 1z7x_W 292 AGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCS---------------------HFSSVLAQNRFLLELQISN 350 (461)
T ss_dssp TTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHH---------------------HHHHHHHHCSSCCEEECCS
T ss_pred CCCCCchHHHHHHHHHhccCCccceeeEcCCCCCchHHHH---------------------HHHHHHhhCCCccEEEccC
Confidence 666655332222221 24555555555555421000 1344556667777777777
Q ss_pred ccccccCCccccc-----ccchhhcccCcccccc----ccCCCcCCCCCCCEEECCCCcCCCcCcc----cccC--Cccc
Q 039533 449 NRLEGEIPSTFGN-----CIRLEQLGMGGNLFQG----PISSSLGSLRGLRVLDLSQNNLSGEIPK----FLAG--LSLN 513 (949)
Q Consensus 449 N~l~~~~p~~~~~-----l~~L~~L~l~~N~l~~----~~~~~~~~l~~L~~L~Ls~N~l~~~~p~----~~~~--~~L~ 513 (949)
|++++..+..+.. .++|+.|+|++|.+++ .+|..+..+++|+.|||++|++++.-.. .+.. ..|+
T Consensus 351 n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~l~~N~i~~~~~~~l~~~l~~~~~~L~ 430 (461)
T 1z7x_W 351 NRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDAGILQLVESVRQPGCLLE 430 (461)
T ss_dssp SBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCCCCCEEECCSSSCCHHHHHHHHHHHTSTTCCCC
T ss_pred CccccccHHHHHHHHcCCCCceEEEECCCCCCChhhHHHHHHHHHhCCCccEEECCCCCCCHHHHHHHHHHhccCCcchh
Confidence 7776554544443 5677888888887775 6777777788888888888888753211 1111 1377
Q ss_pred eEeCCCCcCcCcc
Q 039533 514 NLNLSYNDLEGMV 526 (949)
Q Consensus 514 ~l~ls~N~l~~~~ 526 (949)
.|.+.+|.+....
T Consensus 431 ~L~~~~~~~~~~~ 443 (461)
T 1z7x_W 431 QLVLYDIYWSEEM 443 (461)
T ss_dssp EEECTTCCCCHHH
T ss_pred heeecccccCHHH
Confidence 7887777776543
No 299
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.97 E-value=6.7e-35 Score=338.13 Aligned_cols=353 Identities=19% Similarity=0.189 Sum_probs=237.9
Q ss_pred cEEEEEcCCCCCCccccCC-CCCCCCCceeeccCceecc----ccCCcccCcccCcEEeeccccccCcCCCCCC-CCc--
Q 039533 66 RVTLLDLRSLKLAGSVSHF-IGNLSFLKQLYLQVNSFTH----EIPSEIGGLRRLKVLALNNNSICGEIPTNIS-RCS-- 137 (949)
Q Consensus 66 ~v~~l~l~~~~l~g~~~~~-l~~l~~L~~L~L~~n~l~~----~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~-~l~-- 137 (949)
+++.|||++++++...... +..+++|++|+|++|++++ .++..+..+++|++|+|++|.+++..+..+. .++
T Consensus 4 ~l~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~ 83 (461)
T 1z7x_W 4 DIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQTP 83 (461)
T ss_dssp EEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCST
T ss_pred cceehhhhhcccCchhHHHHHhhcCCccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHHHHHHHHhhC
Confidence 6889999999997655433 7789999999999999985 4677888999999999999999865443332 344
Q ss_pred --cceeecCCCccccc----cccccccCCCCCcEEECCCCCCCCCCCCCc-----CCCCCccEEeccccccCCCC----C
Q 039533 138 --TLIPIHPQNNQLVG----KILSRFSSLSKTEILNLGSNHLTGSIPSSL-----GNLSSIHTISLAYNNLDGTI----P 202 (949)
Q Consensus 138 --~L~~L~l~~n~l~~----~~~~~~~~L~~L~~L~Ls~N~l~~~~p~~~-----~~l~~L~~L~L~~N~l~~~~----p 202 (949)
+|++|++++|.++. .++..|..+++|++|+|++|.+++..+..+ ...++|++|+|++|++++.. +
T Consensus 84 ~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~ 163 (461)
T 1z7x_W 84 SCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLA 163 (461)
T ss_dssp TCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHH
T ss_pred CCceeEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHHHHH
Confidence 79999999999985 568899999999999999999985444332 23568999999999998643 5
Q ss_pred CcccCCCccccccccCcccccccccccCCCCChhhhccccccccccCCCCCCCCCCcchhccc-cccCcccEEEccCCCC
Q 039533 203 NSFGWFENLVFLSLAANNLSVVENKLTGEVPSLEKLQRLQHFTITSNSLGSGGNDDLSFLCSL-TNATRLTWMHINSNNF 281 (949)
Q Consensus 203 ~~~~~l~~L~~L~Ls~N~l~~~~~~l~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l-~~~~~L~~L~L~~N~l 281 (949)
..+..+++|++|+|++|.++..... .+.. .+ ...++|++|++++|++
T Consensus 164 ~~l~~~~~L~~L~L~~n~i~~~~~~------~l~~--------------------------~l~~~~~~L~~L~L~~n~l 211 (461)
T 1z7x_W 164 SVLRAKPDFKELTVSNNDINEAGVR------VLCQ--------------------------GLKDSPCQLEALKLESCGV 211 (461)
T ss_dssp HHHHHCTTCCEEECCSSBCHHHHHH------HHHH--------------------------HHHHSCCCCCEEECTTSCC
T ss_pred HHHhhCCCCCEEECcCCCcchHHHH------HHHH--------------------------HHhcCCCCceEEEccCCCC
Confidence 6677789999999999987643211 0110 00 0123455566666655
Q ss_pred Ccc----CCchhhcccccccEEEccCccccCCC-----CCCCCCCCcccEEEeecceeccc----CCCcccccCCCCEEe
Q 039533 282 GGL----LPGCISNLSKTIKTLFLNNNKIYGSI-----PAGIGNFVNLQRLDMWNNQLSGT----IPPAIGELQNLKILG 348 (949)
Q Consensus 282 ~~~----~p~~~~~l~~~L~~L~L~~N~l~~~~-----~~~~~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~ 348 (949)
++. ++..+..+ ++|++|+|++|+++... +..+..+++|++|+|++|.+++. ++..+..+++|++|+
T Consensus 212 ~~~~~~~l~~~l~~~-~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~ 290 (461)
T 1z7x_W 212 TSDNCRDLCGIVASK-ASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELS 290 (461)
T ss_dssp BTTHHHHHHHHHHHC-TTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEE
T ss_pred cHHHHHHHHHHHHhC-CCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEE
Confidence 543 34444444 35777777777765432 22233567888888888888753 566677788888888
Q ss_pred cCCcccccccCcccccc-----cccceeeccccccccc----CCCCCCCCCCCcEEEeeCccccCCCCCcccC-----Cc
Q 039533 349 LNRNKLSGNIPPSIGNL-----KMLLNLFLNDNFLEVS----IPSSLGQCESLIEINLSNNNLSGTIPPQFFS-----LS 414 (949)
Q Consensus 349 Ls~N~l~~~~p~~~~~l-----~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~-----l~ 414 (949)
|++|++++..+..+... ++|+.|++++|.+++. ++..+..+++|++|++++|++++..+..+.. .+
T Consensus 291 Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~ 370 (461)
T 1z7x_W 291 LAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGS 370 (461)
T ss_dssp CTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTC
T ss_pred CCCCCCchHHHHHHHHHhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCccccccHHHHHHHHcCCCC
Confidence 88888876544444433 6888888888888754 4555666788888888888876433322221 22
Q ss_pred ccceeeccCCCccCC----CCccccccccccceeeecccccc
Q 039533 415 SLSISLDWSRNKLTG----SLPIEVGKLKILEFLYVYENRLE 452 (949)
Q Consensus 415 ~l~~~L~ls~N~l~~----~~p~~~~~l~~L~~L~Ls~N~l~ 452 (949)
++ +.|++++|.+++ .+|..+..+++|++|++++|+++
T Consensus 371 ~L-~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~l~~N~i~ 411 (461)
T 1z7x_W 371 VL-RVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLG 411 (461)
T ss_dssp CC-CEEECTTSCCCHHHHHHHHHHHHHCCCCCEEECCSSSCC
T ss_pred ce-EEEECCCCCCChhhHHHHHHHHHhCCCccEEECCCCCCC
Confidence 33 344444444443 33444444444444444444443
No 300
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.97 E-value=5.3e-31 Score=293.66 Aligned_cols=291 Identities=20% Similarity=0.182 Sum_probs=198.2
Q ss_pred CccCCCCcceeeeeEEeCCCCcEEEEEcCCCCCCccccCCCCCCCCCceeeccCceeccccCCcccCcccCcEEeecccc
Q 039533 45 TWNESIHFCKWYGVTCSRRHQRVTLLDLRSLKLAGSVSHFIGNLSFLKQLYLQVNSFTHEIPSEIGGLRRLKVLALNNNS 124 (949)
Q Consensus 45 sW~~~~~~C~w~gv~C~~~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~ 124 (949)
.|.....+|.|.|+ |+ +++++++ .+|..+. ++|++|+|++|++++..+..|.++++|++|+|++|+
T Consensus 22 ~~~~~~~~C~~~~~-c~----------~~~~~l~-~iP~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~ 87 (353)
T 2z80_A 22 SSNQASLSCDRNGI-CK----------GSSGSLN-SIPSGLT--EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNG 87 (353)
T ss_dssp -----CCEECTTSE-EE----------CCSTTCS-SCCTTCC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSC
T ss_pred CCCccCCCCCCCeE-ee----------CCCCCcc-ccccccc--ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCc
Confidence 45566778999998 75 4566666 5666554 589999999999997777789999999999999999
Q ss_pred ccCcCCCCCCCCccceeecCCCccccccccccccCCCCCcEEECCCCCCCCCCC-CCcCCCCCccEEecccc-ccCCCCC
Q 039533 125 ICGEIPTNISRCSTLIPIHPQNNQLVGKILSRFSSLSKTEILNLGSNHLTGSIP-SSLGNLSSIHTISLAYN-NLDGTIP 202 (949)
Q Consensus 125 l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~L~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~L~~N-~l~~~~p 202 (949)
+++..|..|+++++|++|++++|++++..+..|.++++|++|+|++|++++..+ ..+.++++|++|++++| .+++..+
T Consensus 88 l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~ 167 (353)
T 2z80_A 88 INTIEEDSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQR 167 (353)
T ss_dssp CCEECTTTTTTCTTCCEEECCSSCCSSCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECT
T ss_pred cCccCHhhcCCCCCCCEEECCCCcCCcCCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECCCCccccccCH
Confidence 998888899999999999999999998888889999999999999999995443 47889999999999998 4776667
Q ss_pred CcccCCCccccccccCcccccccccccCCCCChhhhccccccccccCCCCCCCCCCcchhccccccCcccEEEccCCCCC
Q 039533 203 NSFGWFENLVFLSLAANNLSVVENKLTGEVPSLEKLQRLQHFTITSNSLGSGGNDDLSFLCSLTNATRLTWMHINSNNFG 282 (949)
Q Consensus 203 ~~~~~l~~L~~L~Ls~N~l~~~~~~l~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~~~~L~~L~L~~N~l~ 282 (949)
..|+++++|++|++++|.++.+... .+.++++|++|++++|+++
T Consensus 168 ~~~~~l~~L~~L~l~~n~l~~~~~~------------------------------------~l~~l~~L~~L~l~~n~l~ 211 (353)
T 2z80_A 168 KDFAGLTFLEELEIDASDLQSYEPK------------------------------------SLKSIQNVSHLILHMKQHI 211 (353)
T ss_dssp TTTTTCCEEEEEEEEETTCCEECTT------------------------------------TTTTCSEEEEEEEECSCST
T ss_pred HHccCCCCCCEEECCCCCcCccCHH------------------------------------HHhccccCCeecCCCCccc
Confidence 7888888888888888876543211 1223334444444444443
Q ss_pred ccCCchhhcccccccEEEccCccccCCCCCCCCCCCcccEEEeecceecccCCCcccccCCCCEEecCCccccc----cc
Q 039533 283 GLLPGCISNLSKTIKTLFLNNNKIYGSIPAGIGNFVNLQRLDMWNNQLSGTIPPAIGELQNLKILGLNRNKLSG----NI 358 (949)
Q Consensus 283 ~~~p~~~~~l~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~----~~ 358 (949)
. +|..+....++|++|++++|++++..+..+.. ......++.++|++|.+++ .+
T Consensus 212 ~-~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~---------------------~~~~~~l~~l~L~~~~l~~~~l~~l 269 (353)
T 2z80_A 212 L-LLEIFVDVTSSVECLELRDTDLDTFHFSELST---------------------GETNSLIKKFTFRNVKITDESLFQV 269 (353)
T ss_dssp T-HHHHHHHHTTTEEEEEEESCBCTTCCCC---------------------------CCCCCCEEEEESCBCCHHHHHHH
T ss_pred c-chhhhhhhcccccEEECCCCcccccccccccc---------------------ccccchhhccccccccccCcchhhh
Confidence 2 22222221234555555555554433222211 1123344455555555443 35
Q ss_pred CcccccccccceeecccccccccCCCCCCCCCCCcEEEeeCccccCCCC
Q 039533 359 PPSIGNLKMLLNLFLNDNFLEVSIPSSLGQCESLIEINLSNNNLSGTIP 407 (949)
Q Consensus 359 p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p 407 (949)
|..+.++++|+.|++++|+++...+..|.++++|++|++++|.+++..|
T Consensus 270 ~~~l~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~~~~~~~ 318 (353)
T 2z80_A 270 MKLLNQISGLLELEFSRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 318 (353)
T ss_dssp HHHHHTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred HHHHhcccCCCEEECCCCCCCccCHHHHhcCCCCCEEEeeCCCccCcCC
Confidence 6667777777777777777773333335777888888888887775433
No 301
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.96 E-value=3.3e-30 Score=287.25 Aligned_cols=107 Identities=22% Similarity=0.283 Sum_probs=54.3
Q ss_pred cccCcEEeeccccccCcCCCCCCCCccceeecCCCccccccccccccCCCCCcEEECCCCCCCCCCCCCcCCCCCccEEe
Q 039533 112 LRRLKVLALNNNSICGEIPTNISRCSTLIPIHPQNNQLVGKILSRFSSLSKTEILNLGSNHLTGSIPSSLGNLSSIHTIS 191 (949)
Q Consensus 112 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 191 (949)
++.....++++|.++ .+|..+. ++|++|++++|.+++..+..|.++++|++|+|++|.+++..|..|+++++|++|+
T Consensus 30 C~~~~~c~~~~~~l~-~iP~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 106 (353)
T 2z80_A 30 CDRNGICKGSSGSLN-SIPSGLT--EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLD 106 (353)
T ss_dssp ECTTSEEECCSTTCS-SCCTTCC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEE
T ss_pred CCCCeEeeCCCCCcc-ccccccc--ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEEE
Confidence 334444555566555 4555443 2444444444444444444455555555566666655555555555555666666
Q ss_pred ccccccCCCCCCcccCCCccccccccCccc
Q 039533 192 LAYNNLDGTIPNSFGWFENLVFLSLAANNL 221 (949)
Q Consensus 192 L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 221 (949)
|++|++++..+..|+++++|++|+|++|++
T Consensus 107 Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l 136 (353)
T 2z80_A 107 LSYNYLSNLSSSWFKPLSSLTFLNLLGNPY 136 (353)
T ss_dssp CCSSCCSSCCHHHHTTCTTCSEEECTTCCC
T ss_pred CCCCcCCcCCHhHhCCCccCCEEECCCCCC
Confidence 666655533333344444444444444443
No 302
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.96 E-value=3.2e-30 Score=304.53 Aligned_cols=296 Identities=21% Similarity=0.293 Sum_probs=169.4
Q ss_pred CCCCCccCccCCCCcceeeeeEEe------CCCCcEEEEEcCCCCCCccccCCCCCCCCCceeeccCceeccccCCcccC
Q 039533 38 DPVGVLGTWNESIHFCKWYGVTCS------RRHQRVTLLDLRSLKLAGSVSHFIGNLSFLKQLYLQVNSFTHEIPSEIGG 111 (949)
Q Consensus 38 ~~~~~l~sW~~~~~~C~w~gv~C~------~~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~ 111 (949)
|....+++|..+.+||.|+|..|. -....++.|++++++++ .+|..+. ++|++|+|++|+|+ .+|. .
T Consensus 7 ~~~~~w~~W~~~~~~~~~~~r~~~~~~~~~c~~~~l~~L~ls~n~L~-~lp~~l~--~~L~~L~L~~N~l~-~lp~---~ 79 (622)
T 3g06_A 7 EYDAVWSAWRRAAPAEESRGRAAVVQKMRACLNNGNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLT-SLPA---L 79 (622)
T ss_dssp ---CHHHHHHHTCCGGGHHHHHHHHHHHHHHHHHCCCEEECCSSCCS-CCCSCCC--TTCSEEEECSCCCS-CCCC---C
T ss_pred HHHHHHHHHHhcCCcchhccccccCcccccccCCCCcEEEecCCCcC-ccChhhC--CCCcEEEecCCCCC-CCCC---c
Confidence 344567789888899999774321 11124778888888888 6776665 78888888888887 5665 5
Q ss_pred cccCcEEeeccccccCcCCCCCCCCccceeecCCCccccccccccccCCCCCcEEECCCCCCCCCCCCCcCCCCCccEEe
Q 039533 112 LRRLKVLALNNNSICGEIPTNISRCSTLIPIHPQNNQLVGKILSRFSSLSKTEILNLGSNHLTGSIPSSLGNLSSIHTIS 191 (949)
Q Consensus 112 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 191 (949)
+++|++|+|++|+|+ .+|. .+++|++|++++|.|++... .+++|+.|+|++|+|++ +|.. +++|++|+
T Consensus 80 l~~L~~L~Ls~N~l~-~lp~---~l~~L~~L~Ls~N~l~~l~~----~l~~L~~L~L~~N~l~~-lp~~---l~~L~~L~ 147 (622)
T 3g06_A 80 PPELRTLEVSGNQLT-SLPV---LPPGLLELSIFSNPLTHLPA----LPSGLCKLWIFGNQLTS-LPVL---PPGLQELS 147 (622)
T ss_dssp CTTCCEEEECSCCCS-CCCC---CCTTCCEEEECSCCCCCCCC----CCTTCCEEECCSSCCSC-CCCC---CTTCCEEE
T ss_pred CCCCCEEEcCCCcCC-cCCC---CCCCCCEEECcCCcCCCCCC----CCCCcCEEECCCCCCCc-CCCC---CCCCCEEE
Confidence 678888888888887 4665 45556555555555554332 34445555555555552 3332 24455555
Q ss_pred ccccccCCCCCCcccCCCccccccccCcccccccccccCCCCChhhhccccccccccCCCCCCCCCCcchhccccccCcc
Q 039533 192 LAYNNLDGTIPNSFGWFENLVFLSLAANNLSVVENKLTGEVPSLEKLQRLQHFTITSNSLGSGGNDDLSFLCSLTNATRL 271 (949)
Q Consensus 192 L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~l~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~~~~L 271 (949)
|++|++++ +|. .+++|+.|++++|.|+.+
T Consensus 148 Ls~N~l~~-l~~---~~~~L~~L~L~~N~l~~l----------------------------------------------- 176 (622)
T 3g06_A 148 VSDNQLAS-LPA---LPSELCKLWAYNNQLTSL----------------------------------------------- 176 (622)
T ss_dssp CCSSCCSC-CCC---CCTTCCEEECCSSCCSCC-----------------------------------------------
T ss_pred CcCCcCCC-cCC---ccCCCCEEECCCCCCCCC-----------------------------------------------
Confidence 55555542 222 123344444444433321
Q ss_pred cEEEccCCCCCccCCchhhcccccccEEEccCccccCCCCCCCCCCCcccEEEeecceecccCCCcccccCCCCEEecCC
Q 039533 272 TWMHINSNNFGGLLPGCISNLSKTIKTLFLNNNKIYGSIPAGIGNFVNLQRLDMWNNQLSGTIPPAIGELQNLKILGLNR 351 (949)
Q Consensus 272 ~~L~L~~N~l~~~~p~~~~~l~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~ 351 (949)
| ..+++|+.|+|++|+|++ +|.. +++|+.|++++|.++ .+|.. +++|+.|+|++
T Consensus 177 --------------~----~~~~~L~~L~Ls~N~l~~-l~~~---~~~L~~L~L~~N~l~-~l~~~---~~~L~~L~Ls~ 230 (622)
T 3g06_A 177 --------------P----MLPSGLQELSVSDNQLAS-LPTL---PSELYKLWAYNNRLT-SLPAL---PSGLKELIVSG 230 (622)
T ss_dssp --------------C----CCCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCS-SCCCC---CTTCCEEECCS
T ss_pred --------------c----ccCCCCcEEECCCCCCCC-CCCc---cchhhEEECcCCccc-ccCCC---CCCCCEEEccC
Confidence 1 011235555555555543 2221 245555555555555 33332 24566666666
Q ss_pred cccccccCcccccccccceeecccccccccCCCCCCCCCCCcEEEeeCccccCCCCCcccCCcccceeeccCCCccCCCC
Q 039533 352 NKLSGNIPPSIGNLKMLLNLFLNDNFLEVSIPSSLGQCESLIEINLSNNNLSGTIPPQFFSLSSLSISLDWSRNKLTGSL 431 (949)
Q Consensus 352 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~l~~~L~ls~N~l~~~~ 431 (949)
|+|++ +| ..+++|+.|+|++|.|+ .+|. .+++|+.|+|++|+|+ .+|..+..+++| +.|+|++|.+++..
T Consensus 231 N~L~~-lp---~~l~~L~~L~Ls~N~L~-~lp~---~~~~L~~L~Ls~N~L~-~lp~~l~~l~~L-~~L~L~~N~l~~~~ 300 (622)
T 3g06_A 231 NRLTS-LP---VLPSELKELMVSGNRLT-SLPM---LPSGLLSLSVYRNQLT-RLPESLIHLSSE-TTVNLEGNPLSERT 300 (622)
T ss_dssp SCCSC-CC---CCCTTCCEEECCSSCCS-CCCC---CCTTCCEEECCSSCCC-SCCGGGGGSCTT-CEEECCSCCCCHHH
T ss_pred CccCc-CC---CCCCcCcEEECCCCCCC-cCCc---ccccCcEEeCCCCCCC-cCCHHHhhcccc-CEEEecCCCCCCcC
Confidence 66663 34 33455666666666665 3444 4566777777777776 667667777776 56777777777766
Q ss_pred cccccccc
Q 039533 432 PIEVGKLK 439 (949)
Q Consensus 432 p~~~~~l~ 439 (949)
|..+..++
T Consensus 301 ~~~l~~L~ 308 (622)
T 3g06_A 301 LQALREIT 308 (622)
T ss_dssp HHHHHHHH
T ss_pred HHHHHhcc
Confidence 66665554
No 303
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.96 E-value=8.9e-34 Score=339.67 Aligned_cols=434 Identities=14% Similarity=0.118 Sum_probs=301.4
Q ss_pred CcceeeeeEEeCCCCcEEEEEcCCCCCCccccCCCCCCCCCceeeccCcee---ccccCCccc------------CcccC
Q 039533 51 HFCKWYGVTCSRRHQRVTLLDLRSLKLAGSVSHFIGNLSFLKQLYLQVNSF---THEIPSEIG------------GLRRL 115 (949)
Q Consensus 51 ~~C~w~gv~C~~~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~l---~~~~p~~~~------------~l~~L 115 (949)
-|++|.++.+... + .+.+.+ .....++..+..+++|++|+|+++.. .+.+|..++ .+++|
T Consensus 40 vck~W~~~~~~~~--~--~l~~~~-~~~~~~~~~~~~~~~L~~L~L~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~L 114 (592)
T 3ogk_B 40 VCRRWFKIDSETR--E--HVTMAL-CYTATPDRLSRRFPNLRSLKLKGKPRAAMFNLIPENWGGYVTPWVTEISNNLRQL 114 (592)
T ss_dssp SCHHHHHHHHHHC--C--EEEESC-GGGSCHHHHHHHCTTCSEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTTC
T ss_pred HhHHHHHhhhccc--c--EEEEee-ccccChHHHHHhCCCCeEEEecCCcchhhcccccccccccchHHHHHHHhhCCCC
Confidence 3568999854322 1 223332 23333445566788899999987532 134554444 68899
Q ss_pred cEEeeccccccCcCCCCCCCC--ccceeecCCCcc-ccc-cccccccCCCCCcEEECCCCCCCCC----CCCCcCCCCCc
Q 039533 116 KVLALNNNSICGEIPTNISRC--STLIPIHPQNNQ-LVG-KILSRFSSLSKTEILNLGSNHLTGS----IPSSLGNLSSI 187 (949)
Q Consensus 116 ~~L~Ls~N~l~~~~p~~~~~l--~~L~~L~l~~n~-l~~-~~~~~~~~L~~L~~L~Ls~N~l~~~----~p~~~~~l~~L 187 (949)
++|+|++|.+++..+..++.+ ++|++|++++|. +.. ..+.....+++|++|+|++|.+++. ++..+.++++|
T Consensus 115 ~~L~L~~~~i~~~~~~~l~~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L 194 (592)
T 3ogk_B 115 KSVHFRRMIVSDLDLDRLAKARADDLETLKLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQHNTSL 194 (592)
T ss_dssp CEEEEESCBCCHHHHHHHHHHHGGGCCEEEEESCEEEEHHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHHHHCCCC
T ss_pred CeEEeeccEecHHHHHHHHHhccccCcEEECcCCCCcCHHHHHHHHhhCCCCCEEECccccccCcchhHHHHHHhcCCCc
Confidence 999999999987777777664 459999999887 222 1233445889999999999998765 33345678899
Q ss_pred cEEeccccccCC----CCCCcccCCCccccccccCcccccccccccCCCCChhhhccccccccccCCCCCCCCCCcchhc
Q 039533 188 HTISLAYNNLDG----TIPNSFGWFENLVFLSLAANNLSVVENKLTGEVPSLEKLQRLQHFTITSNSLGSGGNDDLSFLC 263 (949)
Q Consensus 188 ~~L~L~~N~l~~----~~p~~~~~l~~L~~L~Ls~N~l~~~~~~l~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~ 263 (949)
++|+|++|.+++ .++..+.++++|++|+|++|.+..++ ..+..+++|++|+++........ .....
T Consensus 195 ~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~l~-------~~~~~~~~L~~L~l~~~~~~~~~---~~~~~ 264 (592)
T 3ogk_B 195 EVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILELV-------GFFKAAANLEEFCGGSLNEDIGM---PEKYM 264 (592)
T ss_dssp CEEECTTCCCSSCCHHHHHHHHHHCTTCCEEECSSCBGGGGH-------HHHHHCTTCCEEEECBCCCCTTC---TTSSS
T ss_pred cEEEeeccCCCccCHHHHHHHHhhCCCCcEEeccCccHHHHH-------HHHhhhhHHHhhcccccccccch---HHHHH
Confidence 999999999973 34445677899999999998876543 23677888999999864332111 12234
Q ss_pred cccccCcccEEEccCCCCCccCCchhhcccccccEEEccCccccCCCC-CCCCCCCcccEEEeecceecccCCCcccccC
Q 039533 264 SLTNATRLTWMHINSNNFGGLLPGCISNLSKTIKTLFLNNNKIYGSIP-AGIGNFVNLQRLDMWNNQLSGTIPPAIGELQ 342 (949)
Q Consensus 264 ~l~~~~~L~~L~L~~N~l~~~~p~~~~~l~~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~ 342 (949)
.+..+++|+.++++++. .+.+|..+..+ ++|++|+|++|.+++... ..+..+++|++|+|+++...+.++..+..++
T Consensus 265 ~l~~~~~L~~L~l~~~~-~~~l~~~~~~~-~~L~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~~~~~l~~~~~~~~ 342 (592)
T 3ogk_B 265 NLVFPRKLCRLGLSYMG-PNEMPILFPFA-AQIRKLDLLYALLETEDHCTLIQKCPNLEVLETRNVIGDRGLEVLAQYCK 342 (592)
T ss_dssp CCCCCTTCCEEEETTCC-TTTGGGGGGGG-GGCCEEEETTCCCCHHHHHHHHTTCTTCCEEEEEGGGHHHHHHHHHHHCT
T ss_pred HhhccccccccCccccc-hhHHHHHHhhc-CCCcEEecCCCcCCHHHHHHHHHhCcCCCEEeccCccCHHHHHHHHHhCC
Confidence 56777889999998753 34556666555 469999999999765433 3357889999999994433344445556788
Q ss_pred CCCEEecC-----------Cccccccc-CcccccccccceeecccccccccCCCCCCC-CCCCcEEEee----CccccCC
Q 039533 343 NLKILGLN-----------RNKLSGNI-PPSIGNLKMLLNLFLNDNFLEVSIPSSLGQ-CESLIEINLS----NNNLSGT 405 (949)
Q Consensus 343 ~L~~L~Ls-----------~N~l~~~~-p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~-l~~L~~L~l~----~N~l~~~ 405 (949)
+|++|+|+ .|.+++.. +..+.++++|++|+++.|.+++..+..+.. +++|+.|+++ .|++++.
T Consensus 343 ~L~~L~L~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~~ 422 (592)
T 3ogk_B 343 QLKRLRIERGADEQGMEDEEGLVSQRGLIALAQGCQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDL 422 (592)
T ss_dssp TCCEEEEECCCCSSTTSSTTCCCCHHHHHHHHHHCTTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCSSC
T ss_pred CCCEEEeecCccccccccccCccCHHHHHHHHhhCccCeEEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCccccCc
Confidence 99999999 46776542 233456889999999888888776666665 8889999996 6777743
Q ss_pred -----CCCcccCCcccceeeccCCC--ccCCCCcccccc-ccccceeeeccccccc-cCCcccccccchhhcccCccccc
Q 039533 406 -----IPPQFFSLSSLSISLDWSRN--KLTGSLPIEVGK-LKILEFLYVYENRLEG-EIPSTFGNCIRLEQLGMGGNLFQ 476 (949)
Q Consensus 406 -----~p~~~~~l~~l~~~L~ls~N--~l~~~~p~~~~~-l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~l~~N~l~ 476 (949)
++..+..+++| +.|+++++ .+++..+..+.. +++|++|+|++|++++ .++..+..+++|+.|+|++|.++
T Consensus 423 p~~~~~~~~~~~~~~L-~~L~L~~~~~~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~ 501 (592)
T 3ogk_B 423 PLDNGVRSLLIGCKKL-RRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFS 501 (592)
T ss_dssp CCHHHHHHHHHHCTTC-CEEEEECCGGGCCHHHHHHHHHSCTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCCCB
T ss_pred hHHHHHHHHHHhCCCC-CEEEEecCCCCccHHHHHHHHHhCccceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCCCc
Confidence 22335567777 67888743 366555555543 7788888888888876 34555677888888888888876
Q ss_pred cc-cCCCcCCCCCCCEEECCCCcCCCc
Q 039533 477 GP-ISSSLGSLRGLRVLDLSQNNLSGE 502 (949)
Q Consensus 477 ~~-~~~~~~~l~~L~~L~Ls~N~l~~~ 502 (949)
+. ++..+..+++|+.|+|++|++++.
T Consensus 502 ~~~~~~~~~~l~~L~~L~ls~n~it~~ 528 (592)
T 3ogk_B 502 ERAIAAAVTKLPSLRYLWVQGYRASMT 528 (592)
T ss_dssp HHHHHHHHHHCSSCCEEEEESCBCCTT
T ss_pred HHHHHHHHHhcCccCeeECcCCcCCHH
Confidence 54 333445678888888888888765
No 304
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.96 E-value=2.4e-29 Score=274.44 Aligned_cols=250 Identities=25% Similarity=0.248 Sum_probs=217.3
Q ss_pred cEEEccCCCCCccCCchhhcccccccEEEccCccccCCCCCCCCCCCcccEEEeecceecc--cCCCcccccCCCCEEec
Q 039533 272 TWMHINSNNFGGLLPGCISNLSKTIKTLFLNNNKIYGSIPAGIGNFVNLQRLDMWNNQLSG--TIPPAIGELQNLKILGL 349 (949)
Q Consensus 272 ~~L~L~~N~l~~~~p~~~~~l~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~--~~p~~~~~l~~L~~L~L 349 (949)
+.++++++.++.. |.. ++++|++|+|++|+++...+..|..+++|++|+|++|.++. ..|..+..+++|++|+|
T Consensus 10 ~~l~c~~~~l~~i-p~~---~~~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~L 85 (306)
T 2z66_A 10 TEIRCNSKGLTSV-PTG---IPSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDL 85 (306)
T ss_dssp TEEECCSSCCSSC-CSC---CCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEEC
T ss_pred CEEEcCCCCcccC-CCC---CCCCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCcccccccccccCEEEC
Confidence 4677777777743 433 23579999999999986555568899999999999999983 33677778999999999
Q ss_pred CCcccccccCcccccccccceeecccccccccCC-CCCCCCCCCcEEEeeCccccCCCCCcccCCcccceeeccCCCccC
Q 039533 350 NRNKLSGNIPPSIGNLKMLLNLFLNDNFLEVSIP-SSLGQCESLIEINLSNNNLSGTIPPQFFSLSSLSISLDWSRNKLT 428 (949)
Q Consensus 350 s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~l~~~L~ls~N~l~ 428 (949)
++|+++ .+|..+.++++|++|++++|.+++..+ ..+..+++|++|++++|++++..|..+..+++| +.|++++|.++
T Consensus 86 s~n~i~-~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L-~~L~l~~n~l~ 163 (306)
T 2z66_A 86 SFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSL-EVLKMAGNSFQ 163 (306)
T ss_dssp CSCSEE-EEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTC-CEEECTTCEEG
T ss_pred CCCccc-cChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCC-CEEECCCCccc
Confidence 999998 567779999999999999999987655 688999999999999999998888889899999 78999999998
Q ss_pred C-CCccccccccccceeeeccccccccCCcccccccchhhcccCccccccccCCCcCCCCCCCEEECCCCcCCCcCcccc
Q 039533 429 G-SLPIEVGKLKILEFLYVYENRLEGEIPSTFGNCIRLEQLGMGGNLFQGPISSSLGSLRGLRVLDLSQNNLSGEIPKFL 507 (949)
Q Consensus 429 ~-~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 507 (949)
+ .+|..+..+++|++|+|++|++++..|..|..+++|+.|+|++|++++..+..+..+++|+.|||++|++++.+|..+
T Consensus 164 ~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~ 243 (306)
T 2z66_A 164 ENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQEL 243 (306)
T ss_dssp GGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEEECTTSCCCBCSSSSC
T ss_pred cccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCCEeECCCCCCcccCHHHH
Confidence 7 688899999999999999999998889999999999999999999998888889999999999999999999999888
Q ss_pred cCC--ccceEeCCCCcCcCccc
Q 039533 508 AGL--SLNNLNLSYNDLEGMVT 527 (949)
Q Consensus 508 ~~~--~L~~l~ls~N~l~~~~~ 527 (949)
..+ +|++|+|++|++++..+
T Consensus 244 ~~~~~~L~~L~L~~N~~~~~c~ 265 (306)
T 2z66_A 244 QHFPSSLAFLNLTQNDFACTCE 265 (306)
T ss_dssp CCCCTTCCEEECTTCCEECSGG
T ss_pred HhhhccCCEEEccCCCeecccC
Confidence 876 39999999999988654
No 305
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.96 E-value=6.9e-29 Score=286.20 Aligned_cols=228 Identities=23% Similarity=0.213 Sum_probs=141.8
Q ss_pred CCCceeeccCceeccccCCcccCcccCcEEeeccccccCcCCCCCCCCccceeecCCCccccccccccccCCCCCcEEEC
Q 039533 89 SFLKQLYLQVNSFTHEIPSEIGGLRRLKVLALNNNSICGEIPTNISRCSTLIPIHPQNNQLVGKILSRFSSLSKTEILNL 168 (949)
Q Consensus 89 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~L~~L~~L~L 168 (949)
++|++|+|++|++++..|..|.++++|++|+|++|+|++..|..|.++++|++|+|++|+|+...+..|..+++|++|+|
T Consensus 75 ~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 154 (452)
T 3zyi_A 75 SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWL 154 (452)
T ss_dssp TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSBCCTTTSSSCTTCCEEEC
T ss_pred CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCcCCccChhhhcccCCCCEEEC
Confidence 46666777777776666666666777777777777666655666666666666666666666666666666666666666
Q ss_pred CCCCCCCCCCCCcCCCCCccEEeccc-cccCCCCCCcccCCCccccccccCcccccccccccCCCCChhhhccccccccc
Q 039533 169 GSNHLTGSIPSSLGNLSSIHTISLAY-NNLDGTIPNSFGWFENLVFLSLAANNLSVVENKLTGEVPSLEKLQRLQHFTIT 247 (949)
Q Consensus 169 s~N~l~~~~p~~~~~l~~L~~L~L~~-N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~l~~~~~~l~~l~~L~~L~l~ 247 (949)
++|.|+...+..|.++++|++|+|++ |.+....+..|.++++|++|+|++|+++.++
T Consensus 155 ~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~---------------------- 212 (452)
T 3zyi_A 155 RNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKDMP---------------------- 212 (452)
T ss_dssp CSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSSCC----------------------
T ss_pred CCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCcccccc----------------------
Confidence 66666644445566666666666665 3333333334555555555555555443221
Q ss_pred cCCCCCCCCCCcchhccccccCcccEEEccCCCCCccCCchhhcccccccEEEccCccccCCCCCCCCCCCcccEEEeec
Q 039533 248 SNSLGSGGNDDLSFLCSLTNATRLTWMHINSNNFGGLLPGCISNLSKTIKTLFLNNNKIYGSIPAGIGNFVNLQRLDMWN 327 (949)
Q Consensus 248 ~N~l~~~~~~~~~~~~~l~~~~~L~~L~L~~N~l~~~~p~~~~~l~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~ 327 (949)
.+..+ ++|++|+|++|+|++..|..|..+++|++|+|++
T Consensus 213 ----------------------------------------~~~~l-~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~ 251 (452)
T 3zyi_A 213 ----------------------------------------NLTPL-VGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMN 251 (452)
T ss_dssp ----------------------------------------CCTTC-TTCCEEECTTSCCSEECGGGGTTCTTCCEEECTT
T ss_pred ----------------------------------------ccccc-ccccEEECcCCcCcccCcccccCccCCCEEEeCC
Confidence 11222 2466666666666666666666667777777777
Q ss_pred ceecccCCCcccccCCCCEEecCCcccccccCcccccccccceeeccccccc
Q 039533 328 NQLSGTIPPAIGELQNLKILGLNRNKLSGNIPPSIGNLKMLLNLFLNDNFLE 379 (949)
Q Consensus 328 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 379 (949)
|++++..|..|.++++|+.|+|++|+|++..+..|..+++|+.|+|++|.+.
T Consensus 252 n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~ 303 (452)
T 3zyi_A 252 SQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHNPWN 303 (452)
T ss_dssp SCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTSSTTCTTCCEEECCSSCEE
T ss_pred CcCceECHHHhcCCCCCCEEECCCCcCCccChHHhccccCCCEEEccCCCcC
Confidence 7777666667777777777777777777665666667777777777777665
No 306
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.96 E-value=3.3e-31 Score=289.59 Aligned_cols=152 Identities=17% Similarity=0.181 Sum_probs=91.0
Q ss_pred CccCccCCCCcceeeeeEEeCCCCcEEEEEcCCCCCCccccCCCCCCCCCceeeccCcee-ccccCCccc-------Ccc
Q 039533 42 VLGTWNESIHFCKWYGVTCSRRHQRVTLLDLRSLKLAGSVSHFIGNLSFLKQLYLQVNSF-THEIPSEIG-------GLR 113 (949)
Q Consensus 42 ~l~sW~~~~~~C~w~gv~C~~~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~l-~~~~p~~~~-------~l~ 113 (949)
...+|.....|+.|..+.......+++.++++++.+ .+|..+... |+.|+|++|.+ .+.+|..+. +++
T Consensus 20 ~~~~~~~~~~c~~~~~~~~~~~~~~L~~l~l~~n~l--~~p~~~~~~--L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~ 95 (312)
T 1wwl_A 20 PKPDWSSAFNCLGAADVELYGGGRSLEYLLKRVDTE--ADLGQFTDI--IKSLSLKRLTVRAARIPSRILFGALRVLGIS 95 (312)
T ss_dssp SSCCGGGGGGSSSCSEEEEEEEEEECTTHHHHCCTT--CCCHHHHHH--HHHCCCCEEEEEEEECBHHHHHHHHHHHTTS
T ss_pred cccchHHHhhhhccccEEEEccCCCceeEeeccccc--ccHHHHHHH--HhhcccccccccCCCcCHHHHHHHHHhcCcC
Confidence 355787666777776654332233566677777777 555555444 77777777777 345666555 677
Q ss_pred cCcEEeeccccccCcCCCCC--CCCccceeecCCCccccccccccccCC-----CCCcEEECCCCCCCCCCCCCcCCCCC
Q 039533 114 RLKVLALNNNSICGEIPTNI--SRCSTLIPIHPQNNQLVGKILSRFSSL-----SKTEILNLGSNHLTGSIPSSLGNLSS 186 (949)
Q Consensus 114 ~L~~L~Ls~N~l~~~~p~~~--~~l~~L~~L~l~~n~l~~~~~~~~~~L-----~~L~~L~Ls~N~l~~~~p~~~~~l~~ 186 (949)
+|++|+|++|++++.+|..+ +.+++|++|++++|++++. |..|..+ ++|++|+|++|++++..|..|+++++
T Consensus 96 ~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~ 174 (312)
T 1wwl_A 96 GLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPA 174 (312)
T ss_dssp CCCEEEEEEEBCBSCCCCCSSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSS
T ss_pred CccEEEccCCcccchhHHHHHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCC
Confidence 77777777777777777665 5666665555555555554 4444444 55555555555555444455555555
Q ss_pred ccEEeccccccC
Q 039533 187 IHTISLAYNNLD 198 (949)
Q Consensus 187 L~~L~L~~N~l~ 198 (949)
|++|+|++|++.
T Consensus 175 L~~L~Ls~N~l~ 186 (312)
T 1wwl_A 175 LSTLDLSDNPEL 186 (312)
T ss_dssp CCEEECCSCTTC
T ss_pred CCEEECCCCCcC
Confidence 555555555544
No 307
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.96 E-value=5.4e-29 Score=271.60 Aligned_cols=282 Identities=22% Similarity=0.222 Sum_probs=159.0
Q ss_pred cEEECCCCCCCCCCCCCcCCCCCccEEeccccccCCCCCCcccCCCccccccccCcccccccccccCCCCChhhhccccc
Q 039533 164 EILNLGSNHLTGSIPSSLGNLSSIHTISLAYNNLDGTIPNSFGWFENLVFLSLAANNLSVVENKLTGEVPSLEKLQRLQH 243 (949)
Q Consensus 164 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~l~~~~~~l~~l~~L~~ 243 (949)
+.++.+++.++ .+|..+. ++|++|+|++|+++...+..|+++++|++|+|++|.++.+.. .+
T Consensus 10 ~~l~c~~~~l~-~ip~~~~--~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~-----~~---------- 71 (306)
T 2z66_A 10 TEIRCNSKGLT-SVPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGC-----CS---------- 71 (306)
T ss_dssp TEEECCSSCCS-SCCSCCC--TTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEE-----EE----------
T ss_pred CEEEcCCCCcc-cCCCCCC--CCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccC-----cc----------
Confidence 46677777776 5555443 567777777777774444456777777777777776653310 00
Q ss_pred cccccCCCCCCCCCCcchhccccccCcccEEEccCCCCCccCCchhhcccccccEEEccCccccCCCC-CCCCCCCcccE
Q 039533 244 FTITSNSLGSGGNDDLSFLCSLTNATRLTWMHINSNNFGGLLPGCISNLSKTIKTLFLNNNKIYGSIP-AGIGNFVNLQR 322 (949)
Q Consensus 244 L~l~~N~l~~~~~~~~~~~~~l~~~~~L~~L~L~~N~l~~~~p~~~~~l~~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~ 322 (949)
..+..+++|++|++++|.+++ +|..+..+ ++|++|++++|++++..+ ..+..+++|++
T Consensus 72 -------------------~~~~~~~~L~~L~Ls~n~i~~-l~~~~~~l-~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~ 130 (306)
T 2z66_A 72 -------------------QSDFGTTSLKYLDLSFNGVIT-MSSNFLGL-EQLEHLDFQHSNLKQMSEFSVFLSLRNLIY 130 (306)
T ss_dssp -------------------HHHHSCSCCCEEECCSCSEEE-EEEEEETC-TTCCEEECTTSEEESSTTTTTTTTCTTCCE
T ss_pred -------------------cccccccccCEEECCCCcccc-ChhhcCCC-CCCCEEECCCCcccccccchhhhhccCCCE
Confidence 011123344444444444442 23333333 346666666666664433 45666666666
Q ss_pred EEeecceecccCCCcccccCCCCEEecCCccccc-ccCcccccccccceeecccccccccCCCCCCCCCCCcEEEeeCcc
Q 039533 323 LDMWNNQLSGTIPPAIGELQNLKILGLNRNKLSG-NIPPSIGNLKMLLNLFLNDNFLEVSIPSSLGQCESLIEINLSNNN 401 (949)
Q Consensus 323 L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~ 401 (949)
|++++|.+++..+..|.++++|++|+|++|++++ .+|..+..+++|++|++++|.+++..|..|..+++|++|+|++|+
T Consensus 131 L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~ 210 (306)
T 2z66_A 131 LDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNN 210 (306)
T ss_dssp EECTTSCCEECSTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSC
T ss_pred EECCCCcCCccchhhcccCcCCCEEECCCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCc
Confidence 6666666666666666666666666666666665 456666666666666666666666556666666666666666666
Q ss_pred ccCCCCCcccCCcccceeeccCCCccCCCCcccccccc-ccceeeeccccccccCC--cccccccchhhcccCccccccc
Q 039533 402 LSGTIPPQFFSLSSLSISLDWSRNKLTGSLPIEVGKLK-ILEFLYVYENRLEGEIP--STFGNCIRLEQLGMGGNLFQGP 478 (949)
Q Consensus 402 l~~~~p~~~~~l~~l~~~L~ls~N~l~~~~p~~~~~l~-~L~~L~Ls~N~l~~~~p--~~~~~l~~L~~L~l~~N~l~~~ 478 (949)
+++..+..+..+++| +.|++++|++++..|..+..++ +|++|+|++|++++..+ .....+...+.+.+..+.+...
T Consensus 211 l~~~~~~~~~~l~~L-~~L~L~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~~~~c~~~~~~~~l~~~~~~~~~~~~~~C~ 289 (306)
T 2z66_A 211 FFSLDTFPYKCLNSL-QVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCEHQSFLQWIKDQRQLLVEVERMECA 289 (306)
T ss_dssp CSBCCSGGGTTCTTC-CEEECTTSCCCBCSSSSCCCCCTTCCEEECTTCCEECSGGGHHHHHHHHHTGGGBSCGGGCBEE
T ss_pred cCccChhhccCcccC-CEeECCCCCCcccCHHHHHhhhccCCEEEccCCCeecccChHHHHHHHHhhhhhhccccccccC
Confidence 664444455555555 4566666666555555555553 56666666666654321 1122233444444444444444
Q ss_pred cCCCcCC
Q 039533 479 ISSSLGS 485 (949)
Q Consensus 479 ~~~~~~~ 485 (949)
.|..+.+
T Consensus 290 ~p~~~~g 296 (306)
T 2z66_A 290 TPSDKQG 296 (306)
T ss_dssp ESGGGTT
T ss_pred CchhhCC
Confidence 4444433
No 308
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.96 E-value=6.8e-29 Score=272.77 Aligned_cols=226 Identities=21% Similarity=0.226 Sum_probs=189.1
Q ss_pred ccccEEEccCccccCCCCCCCCCCCcccEEEeecceecccCCCcccccCCCCEEecCCcccccccCcccccccccceeec
Q 039533 294 KTIKTLFLNNNKIYGSIPAGIGNFVNLQRLDMWNNQLSGTIPPAIGELQNLKILGLNRNKLSGNIPPSIGNLKMLLNLFL 373 (949)
Q Consensus 294 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 373 (949)
..++.|+|++|+++ .+|..++.+++|++|+|++|.++ .+|..++++++|++|+|++|+++ .+|..++++++|++|+|
T Consensus 81 ~~l~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L 157 (328)
T 4fcg_A 81 PGRVALELRSVPLP-QFPDQAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSI 157 (328)
T ss_dssp TTCCEEEEESSCCS-SCCSCGGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEE
T ss_pred cceeEEEccCCCch-hcChhhhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEEC
Confidence 35777888888887 66777777888888888888887 77777888888888888888887 67777888888888888
Q ss_pred ccccccccCCCCCCC---------CCCCcEEEeeCccccCCCCCcccCCcccceeeccCCCccCCCCcccccccccccee
Q 039533 374 NDNFLEVSIPSSLGQ---------CESLIEINLSNNNLSGTIPPQFFSLSSLSISLDWSRNKLTGSLPIEVGKLKILEFL 444 (949)
Q Consensus 374 ~~N~l~~~~p~~~~~---------l~~L~~L~l~~N~l~~~~p~~~~~l~~l~~~L~ls~N~l~~~~p~~~~~l~~L~~L 444 (949)
++|.+.+.+|..+.. +++|++|+|++|+++ .+|..+..+++| +.|++++|++++ +|..++.+++|++|
T Consensus 158 ~~n~~~~~~p~~~~~~~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L-~~L~L~~N~l~~-l~~~l~~l~~L~~L 234 (328)
T 4fcg_A 158 RACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNL-KSLKIRNSPLSA-LGPAIHHLPKLEEL 234 (328)
T ss_dssp EEETTCCCCCSCSEEEC-CCCEEESTTCCEEEEEEECCC-CCCGGGGGCTTC-CEEEEESSCCCC-CCGGGGGCTTCCEE
T ss_pred CCCCCccccChhHhhccchhhhccCCCCCEEECcCCCcC-cchHhhcCCCCC-CEEEccCCCCCc-CchhhccCCCCCEE
Confidence 887777777777654 888999999999988 888888888888 789999999884 66678889999999
Q ss_pred eeccccccccCCcccccccchhhcccCccccccccCCCcCCCCCCCEEECCCCcCCCcCcccccCCc-cceEeCCCCcCc
Q 039533 445 YVYENRLEGEIPSTFGNCIRLEQLGMGGNLFQGPISSSLGSLRGLRVLDLSQNNLSGEIPKFLAGLS-LNNLNLSYNDLE 523 (949)
Q Consensus 445 ~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~-L~~l~ls~N~l~ 523 (949)
+|++|++.+.+|..|+.+++|+.|+|++|++.+.+|..++.+++|+.|+|++|++.+.+|..+..++ ++.+++..|.+.
T Consensus 235 ~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~iP~~l~~L~~L~~l~l~~~~~~ 314 (328)
T 4fcg_A 235 DLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQLPANCIILVPPHLQA 314 (328)
T ss_dssp ECTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCCCGGGGGSCTTCEEECCGGGSC
T ss_pred ECcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCchhhccHHHhhccCceEEeCCHHHHH
Confidence 9999999889999999999999999999998889999999999999999999999999999888887 888888877766
Q ss_pred Cc
Q 039533 524 GM 525 (949)
Q Consensus 524 ~~ 525 (949)
..
T Consensus 315 ~l 316 (328)
T 4fcg_A 315 QL 316 (328)
T ss_dssp C-
T ss_pred HH
Confidence 54
No 309
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.96 E-value=3.5e-28 Score=280.28 Aligned_cols=249 Identities=21% Similarity=0.193 Sum_probs=209.2
Q ss_pred ccEEEccCCCCCccCCchhhcccccccEEEccCccccCCCCCCCCCCCcccEEEeecceecccCCCcccccCCCCEEecC
Q 039533 271 LTWMHINSNNFGGLLPGCISNLSKTIKTLFLNNNKIYGSIPAGIGNFVNLQRLDMWNNQLSGTIPPAIGELQNLKILGLN 350 (949)
Q Consensus 271 L~~L~L~~N~l~~~~p~~~~~l~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls 350 (949)
...++.+++.++. +|.. +++++++|+|++|+|++..|..|..+++|++|+|++|+|++..|..|.++++|++|+|+
T Consensus 56 ~~~v~c~~~~l~~-iP~~---~~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~ 131 (452)
T 3zyi_A 56 FSKVVCTRRGLSE-VPQG---IPSNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELF 131 (452)
T ss_dssp SCEEECCSSCCSS-CCSC---CCTTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECC
T ss_pred CcEEEECCCCcCc-cCCC---CCCCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECC
Confidence 4567777777774 4443 34578899999999988888889999999999999999998888889999999999999
Q ss_pred CcccccccCcccccccccceeecccccccccCCCCCCCCCCCcEEEeeCccccCCCCC-cccCCcccceeeccCCCccCC
Q 039533 351 RNKLSGNIPPSIGNLKMLLNLFLNDNFLEVSIPSSLGQCESLIEINLSNNNLSGTIPP-QFFSLSSLSISLDWSRNKLTG 429 (949)
Q Consensus 351 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~-~~~~l~~l~~~L~ls~N~l~~ 429 (949)
+|+|++..+..|.++++|++|+|++|.++...+..|.++++|++|++++|+..+.+|. .|..+++| +.|++++|++++
T Consensus 132 ~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L-~~L~L~~n~l~~ 210 (452)
T 3zyi_A 132 DNWLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNL-KYLNLGMCNIKD 210 (452)
T ss_dssp SSCCSBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTC-CEEECTTSCCSS
T ss_pred CCcCCccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCC-CEEECCCCcccc
Confidence 9999877777788899999999999999877777888999999999998544445554 57778888 789999999985
Q ss_pred CCccccccccccceeeeccccccccCCcccccccchhhcccCccccccccCCCcCCCCCCCEEECCCCcCCCcCcccccC
Q 039533 430 SLPIEVGKLKILEFLYVYENRLEGEIPSTFGNCIRLEQLGMGGNLFQGPISSSLGSLRGLRVLDLSQNNLSGEIPKFLAG 509 (949)
Q Consensus 430 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 509 (949)
. | .+..+++|+.|+|++|++++..|..|.++++|+.|+|++|++++..|..|..+++|+.|+|++|+|++.++..+..
T Consensus 211 ~-~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 288 (452)
T 3zyi_A 211 M-P-NLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTP 288 (452)
T ss_dssp C-C-CCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTSSTT
T ss_pred c-c-cccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccChHHhcc
Confidence 3 4 5788899999999999999888999999999999999999999888999999999999999999999877777777
Q ss_pred Cc-cceEeCCCCcCcCcc
Q 039533 510 LS-LNNLNLSYNDLEGMV 526 (949)
Q Consensus 510 ~~-L~~l~ls~N~l~~~~ 526 (949)
++ |+.|+|++|++....
T Consensus 289 l~~L~~L~L~~Np~~CdC 306 (452)
T 3zyi_A 289 LRYLVELHLHHNPWNCDC 306 (452)
T ss_dssp CTTCCEEECCSSCEECST
T ss_pred ccCCCEEEccCCCcCCCC
Confidence 76 999999999987654
No 310
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.96 E-value=8.8e-30 Score=278.95 Aligned_cols=267 Identities=19% Similarity=0.172 Sum_probs=168.9
Q ss_pred ceeecCCCccccccccccccCCCCCcEEECCCCCCCCCCCCCcCCCCCccEEeccccccCCCCCCcccCCCccccccccC
Q 039533 139 LIPIHPQNNQLVGKILSRFSSLSKTEILNLGSNHLTGSIPSSLGNLSSIHTISLAYNNLDGTIPNSFGWFENLVFLSLAA 218 (949)
Q Consensus 139 L~~L~l~~n~l~~~~~~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~ 218 (949)
++.++++.+.+.......+..+++|++|+|++|.+++..|..|+++++|++|+|++|++++..+ |..+++|++|+|++
T Consensus 12 l~i~~ls~~~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls~ 89 (317)
T 3o53_A 12 YKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNN 89 (317)
T ss_dssp EEEESCCTTTHHHHHHHHHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEECCS
T ss_pred eeEeeccccchhhhHHHHhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEECcC
Confidence 3445666666666666667777778888888888887666778888888888888888875544 77777777777777
Q ss_pred cccccccccccCCCCChhhhccccccccccCCCCCCCCCCcchhccccccCcccEEEccCCCCCccCCchhhcccccccE
Q 039533 219 NNLSVVENKLTGEVPSLEKLQRLQHFTITSNSLGSGGNDDLSFLCSLTNATRLTWMHINSNNFGGLLPGCISNLSKTIKT 298 (949)
Q Consensus 219 N~l~~~~~~l~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~~~~L~~L~L~~N~l~~~~p~~~~~l~~~L~~ 298 (949)
|+|+.++. .++ |++
T Consensus 90 n~l~~l~~-----------------------------------------~~~-------------------------L~~ 103 (317)
T 3o53_A 90 NYVQELLV-----------------------------------------GPS-------------------------IET 103 (317)
T ss_dssp SEEEEEEE-----------------------------------------CTT-------------------------CCE
T ss_pred CccccccC-----------------------------------------CCC-------------------------cCE
Confidence 76653321 122 333
Q ss_pred EEccCccccCCCCCCCCCCCcccEEEeecceecccCCCcccccCCCCEEecCCcccccccCcccc-cccccceeeccccc
Q 039533 299 LFLNNNKIYGSIPAGIGNFVNLQRLDMWNNQLSGTIPPAIGELQNLKILGLNRNKLSGNIPPSIG-NLKMLLNLFLNDNF 377 (949)
Q Consensus 299 L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~-~l~~L~~L~L~~N~ 377 (949)
|++++|+|++..+.. +++|++|++++|++++..+..++.+++|+.|+|++|++++..|..+. .+++|++|+|++|.
T Consensus 104 L~l~~n~l~~~~~~~---~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~ 180 (317)
T 3o53_A 104 LHAANNNISRVSCSR---GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNF 180 (317)
T ss_dssp EECCSSCCSEEEECC---CSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSC
T ss_pred EECCCCccCCcCccc---cCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCc
Confidence 444444443322221 34455555555555554455555555555555555555554444442 45556666666665
Q ss_pred ccccCCCCCCCCCCCcEEEeeCccccCCCCCcccCCcccceeeccCCCccCCCCccccccccccceeeecccccc-ccCC
Q 039533 378 LEVSIPSSLGQCESLIEINLSNNNLSGTIPPQFFSLSSLSISLDWSRNKLTGSLPIEVGKLKILEFLYVYENRLE-GEIP 456 (949)
Q Consensus 378 l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~l~~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~-~~~p 456 (949)
+++. |. ...+++|++|+|++|+++ .+|..+..+++| +.|++++|+++ .+|..+..+++|+.|++++|++. +.+|
T Consensus 181 l~~~-~~-~~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~L-~~L~L~~N~l~-~l~~~~~~l~~L~~L~l~~N~~~~~~~~ 255 (317)
T 3o53_A 181 IYDV-KG-QVVFAKLKTLDLSSNKLA-FMGPEFQSAAGV-TWISLRNNKLV-LIEKALRFSQNLEHFDLRGNGFHCGTLR 255 (317)
T ss_dssp CCEE-EC-CCCCTTCCEEECCSSCCC-EECGGGGGGTTC-SEEECTTSCCC-EECTTCCCCTTCCEEECTTCCCBHHHHH
T ss_pred Cccc-cc-ccccccCCEEECCCCcCC-cchhhhcccCcc-cEEECcCCccc-chhhHhhcCCCCCEEEccCCCccCcCHH
Confidence 5543 22 223566777777777766 344456666666 56777777776 45667777888888888888887 6777
Q ss_pred cccccccchhhcccC-ccccccccCC
Q 039533 457 STFGNCIRLEQLGMG-GNLFQGPISS 481 (949)
Q Consensus 457 ~~~~~l~~L~~L~l~-~N~l~~~~~~ 481 (949)
..++.+++|+.|+++ .+.++|..|.
T Consensus 256 ~~~~~~~~L~~l~l~~~~~l~~~~~~ 281 (317)
T 3o53_A 256 DFFSKNQRVQTVAKQTVKKLTGQNEE 281 (317)
T ss_dssp HHHHTCHHHHHHHHHHHHHHHSSSSC
T ss_pred HHHhccccceEEECCCchhccCCchh
Confidence 888888888888888 4556665544
No 311
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.96 E-value=1.8e-28 Score=264.39 Aligned_cols=227 Identities=23% Similarity=0.193 Sum_probs=126.5
Q ss_pred cEEEccCCCCCccCCchhhcccccccEEEccCccccCCCCCCCCCCCcccEEEeecceecccCCCcccccCCCCEEecCC
Q 039533 272 TWMHINSNNFGGLLPGCISNLSKTIKTLFLNNNKIYGSIPAGIGNFVNLQRLDMWNNQLSGTIPPAIGELQNLKILGLNR 351 (949)
Q Consensus 272 ~~L~L~~N~l~~~~p~~~~~l~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~ 351 (949)
+.++.+++.++.. |.. ++++|++|+|++|+|++..+..|..+++|++|+|++|.+++..|..|.++++|++|+|++
T Consensus 14 ~~~~c~~~~l~~i-p~~---~~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 89 (285)
T 1ozn_A 14 VTTSCPQQGLQAV-PVG---IPAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSD 89 (285)
T ss_dssp CEEECCSSCCSSC-CTT---CCTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred eEEEcCcCCcccC-CcC---CCCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCC
Confidence 4566666666543 322 234566666666666655555566666666666666666655566666666666666666
Q ss_pred cc-cccccCcccccccccceeecccccccccCCCCCCCCCCCcEEEeeCccccCCCCCcccCCcccceeeccCCCccCCC
Q 039533 352 NK-LSGNIPPSIGNLKMLLNLFLNDNFLEVSIPSSLGQCESLIEINLSNNNLSGTIPPQFFSLSSLSISLDWSRNKLTGS 430 (949)
Q Consensus 352 N~-l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~l~~~L~ls~N~l~~~ 430 (949)
|+ ++...|..|.++++|++|++++|.+++..|..|.++++|++|++++|++++..+
T Consensus 90 n~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~----------------------- 146 (285)
T 1ozn_A 90 NAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPD----------------------- 146 (285)
T ss_dssp CTTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCT-----------------------
T ss_pred CCCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCH-----------------------
Confidence 65 554445556666666666666666665555556666666666666666553333
Q ss_pred CccccccccccceeeeccccccccCCcccccccchhhcccCccccccccCCCcCCCCCCCEEECCCCcCCCcCcccccCC
Q 039533 431 LPIEVGKLKILEFLYVYENRLEGEIPSTFGNCIRLEQLGMGGNLFQGPISSSLGSLRGLRVLDLSQNNLSGEIPKFLAGL 510 (949)
Q Consensus 431 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~ 510 (949)
..++.+++|+.|+|++|++++..+..|..+++|+.|+|++|++++..|..|..+++|+.|+|++|++++.++..+..+
T Consensus 147 --~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l 224 (285)
T 1ozn_A 147 --DTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPL 224 (285)
T ss_dssp --TTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTC
T ss_pred --hHhccCCCccEEECCCCcccccCHHHhcCccccCEEECCCCcccccCHhHccCcccccEeeCCCCcCCcCCHHHcccC
Confidence 334444455555555555554333445555555555555555555555555555555555555555555444444444
Q ss_pred c-cceEeCCCCcCcCccc
Q 039533 511 S-LNNLNLSYNDLEGMVT 527 (949)
Q Consensus 511 ~-L~~l~ls~N~l~~~~~ 527 (949)
+ |+.|++++|++.+..+
T Consensus 225 ~~L~~L~l~~N~~~c~~~ 242 (285)
T 1ozn_A 225 RALQYLRLNDNPWVCDCR 242 (285)
T ss_dssp TTCCEEECCSSCEECSGG
T ss_pred cccCEEeccCCCccCCCC
Confidence 3 5555555555554433
No 312
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.96 E-value=4.6e-28 Score=278.27 Aligned_cols=248 Identities=23% Similarity=0.240 Sum_probs=214.0
Q ss_pred ccEEEccCCCCCccCCchhhcccccccEEEccCccccCCCCCCCCCCCcccEEEeecceecccCCCcccccCCCCEEecC
Q 039533 271 LTWMHINSNNFGGLLPGCISNLSKTIKTLFLNNNKIYGSIPAGIGNFVNLQRLDMWNNQLSGTIPPAIGELQNLKILGLN 350 (949)
Q Consensus 271 L~~L~L~~N~l~~~~p~~~~~l~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls 350 (949)
...++.++++++. +|..+ +++++.|+|++|+|++..+..|.++++|++|+|++|.|++..+..|.++++|++|+|+
T Consensus 45 ~~~v~c~~~~l~~-iP~~~---~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~ 120 (440)
T 3zyj_A 45 FSKVICVRKNLRE-VPDGI---STNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELF 120 (440)
T ss_dssp SCEEECCSCCCSS-CCSCC---CTTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECC
T ss_pred CCEEEeCCCCcCc-CCCCC---CCCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECC
Confidence 4567777777774 45433 3578999999999998888899999999999999999998888899999999999999
Q ss_pred CcccccccCcccccccccceeecccccccccCCCCCCCCCCCcEEEeeCccccCCCCC-cccCCcccceeeccCCCccCC
Q 039533 351 RNKLSGNIPPSIGNLKMLLNLFLNDNFLEVSIPSSLGQCESLIEINLSNNNLSGTIPP-QFFSLSSLSISLDWSRNKLTG 429 (949)
Q Consensus 351 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~-~~~~l~~l~~~L~ls~N~l~~ 429 (949)
+|+|++..+..|.++++|++|+|++|.++...+..|.++++|++|+|++|+..+.++. .|..+++| +.|++++|+++
T Consensus 121 ~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L-~~L~L~~n~l~- 198 (440)
T 3zyj_A 121 DNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNL-RYLNLAMCNLR- 198 (440)
T ss_dssp SSCCSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSC-CEEECTTSCCS-
T ss_pred CCcCCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhccccc-CeecCCCCcCc-
Confidence 9999977777899999999999999999988888899999999999998554445554 67788888 78999999998
Q ss_pred CCccccccccccceeeeccccccccCCcccccccchhhcccCccccccccCCCcCCCCCCCEEECCCCcCCCcCcccccC
Q 039533 430 SLPIEVGKLKILEFLYVYENRLEGEIPSTFGNCIRLEQLGMGGNLFQGPISSSLGSLRGLRVLDLSQNNLSGEIPKFLAG 509 (949)
Q Consensus 430 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 509 (949)
.+| .+..+++|+.|+|++|++++..|..|.++++|+.|+|++|++++..+..|..+++|+.|+|++|+|++..+..+..
T Consensus 199 ~~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 277 (440)
T 3zyj_A 199 EIP-NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTP 277 (440)
T ss_dssp SCC-CCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCTTTTSS
T ss_pred ccc-ccCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCccChhHhcc
Confidence 455 4888999999999999999888999999999999999999999999999999999999999999999888888877
Q ss_pred Cc-cceEeCCCCcCcCc
Q 039533 510 LS-LNNLNLSYNDLEGM 525 (949)
Q Consensus 510 ~~-L~~l~ls~N~l~~~ 525 (949)
++ |+.|+|++|++..-
T Consensus 278 l~~L~~L~L~~Np~~Cd 294 (440)
T 3zyj_A 278 LHHLERIHLHHNPWNCN 294 (440)
T ss_dssp CTTCCEEECCSSCEECS
T ss_pred ccCCCEEEcCCCCccCC
Confidence 76 99999999998764
No 313
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.96 E-value=4.4e-28 Score=278.44 Aligned_cols=244 Identities=23% Similarity=0.210 Sum_probs=172.2
Q ss_pred EEcCCCCCCccccCCCCCCCCCceeeccCceeccccCCcccCcccCcEEeeccccccCcCCCCCCCCccceeecCCCccc
Q 039533 70 LDLRSLKLAGSVSHFIGNLSFLKQLYLQVNSFTHEIPSEIGGLRRLKVLALNNNSICGEIPTNISRCSTLIPIHPQNNQL 149 (949)
Q Consensus 70 l~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~l 149 (949)
++..+.+++ .+|..+. ++++.|+|++|++++..+..|.++++|++|+|++|.|++..|..|.++++|++|+|++|+|
T Consensus 48 v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l 124 (440)
T 3zyj_A 48 VICVRKNLR-EVPDGIS--TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRL 124 (440)
T ss_dssp EECCSCCCS-SCCSCCC--TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSCC
T ss_pred EEeCCCCcC-cCCCCCC--CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCCcC
Confidence 334444555 5555554 6788888888888877778888888888888888888866667777777777777777777
Q ss_pred cccccccccCCCCCcEEECCCCCCCCCCCCCcCCCCCccEEecccc-ccCCCCCCcccCCCccccccccCcccccccccc
Q 039533 150 VGKILSRFSSLSKTEILNLGSNHLTGSIPSSLGNLSSIHTISLAYN-NLDGTIPNSFGWFENLVFLSLAANNLSVVENKL 228 (949)
Q Consensus 150 ~~~~~~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N-~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~l 228 (949)
+...+..|..+++|++|+|++|.|+...+..|.++++|++|+|++| .++...+..|.++++|++|+|++|+++.++
T Consensus 125 ~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~--- 201 (440)
T 3zyj_A 125 TTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLREIP--- 201 (440)
T ss_dssp SSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCSSCC---
T ss_pred CeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCcccc---
Confidence 7766667777777777777777777555566777777777777763 344333345666666666666666554322
Q ss_pred cCCCCChhhhccccccccccCCCCCCCCCCcchhccccccCcccEEEccCCCCCccCCchhhcccccccEEEccCccccC
Q 039533 229 TGEVPSLEKLQRLQHFTITSNSLGSGGNDDLSFLCSLTNATRLTWMHINSNNFGGLLPGCISNLSKTIKTLFLNNNKIYG 308 (949)
Q Consensus 229 ~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~~~~L~~L~L~~N~l~~~~p~~~~~l~~~L~~L~L~~N~l~~ 308 (949)
. +..+ ++|++|+|++|+|++
T Consensus 202 -----~------------------------------------------------------~~~l-~~L~~L~Ls~N~l~~ 221 (440)
T 3zyj_A 202 -----N------------------------------------------------------LTPL-IKLDELDLSGNHLSA 221 (440)
T ss_dssp -----C------------------------------------------------------CTTC-SSCCEEECTTSCCCE
T ss_pred -----c------------------------------------------------------cCCC-cccCEEECCCCccCc
Confidence 0 1122 246677777777776
Q ss_pred CCCCCCCCCCcccEEEeecceecccCCCcccccCCCCEEecCCcccccccCcccccccccceeeccccccc
Q 039533 309 SIPAGIGNFVNLQRLDMWNNQLSGTIPPAIGELQNLKILGLNRNKLSGNIPPSIGNLKMLLNLFLNDNFLE 379 (949)
Q Consensus 309 ~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 379 (949)
..|..|..+++|++|+|++|+|++..+..|.++++|+.|+|++|+|++..+..|..+++|+.|+|++|.+.
T Consensus 222 ~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~ 292 (440)
T 3zyj_A 222 IRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPWN 292 (440)
T ss_dssp ECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCTTTTSSCTTCCEEECCSSCEE
T ss_pred cChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCccChhHhccccCCCEEEcCCCCcc
Confidence 66777777778888888888888777777888888888888888888766677777888888888888775
No 314
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.96 E-value=1.5e-28 Score=265.14 Aligned_cols=252 Identities=20% Similarity=0.214 Sum_probs=195.1
Q ss_pred cccccccCCCCCCCCCCcchhccccccCcccEEEccCCCCCccCCchhhcccccccEEEccCccccCCCCCCCCCCCccc
Q 039533 242 QHFTITSNSLGSGGNDDLSFLCSLTNATRLTWMHINSNNFGGLLPGCISNLSKTIKTLFLNNNKIYGSIPAGIGNFVNLQ 321 (949)
Q Consensus 242 ~~L~l~~N~l~~~~~~~~~~~~~l~~~~~L~~L~L~~N~l~~~~p~~~~~l~~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 321 (949)
++++.+++.++..+.. -.++|++|++++|++++..+..+..+ ++|++|+|++|++++..|..|..+++|+
T Consensus 14 ~~~~c~~~~l~~ip~~---------~~~~l~~L~l~~n~i~~~~~~~~~~~-~~L~~L~l~~n~l~~~~~~~~~~l~~L~ 83 (285)
T 1ozn_A 14 VTTSCPQQGLQAVPVG---------IPAASQRIFLHGNRISHVPAASFRAC-RNLTILWLHSNVLARIDAAAFTGLALLE 83 (285)
T ss_dssp CEEECCSSCCSSCCTT---------CCTTCSEEECTTSCCCEECTTTTTTC-TTCCEEECCSSCCCEECTTTTTTCTTCC
T ss_pred eEEEcCcCCcccCCcC---------CCCCceEEEeeCCcCCccCHHHcccC-CCCCEEECCCCccceeCHhhcCCccCCC
Confidence 5688888888765432 23689999999999999888888887 4699999999999988899999999999
Q ss_pred EEEeecce-ecccCCCcccccCCCCEEecCCcccccccCcccccccccceeecccccccccCCCCCCCCCCCcEEEeeCc
Q 039533 322 RLDMWNNQ-LSGTIPPAIGELQNLKILGLNRNKLSGNIPPSIGNLKMLLNLFLNDNFLEVSIPSSLGQCESLIEINLSNN 400 (949)
Q Consensus 322 ~L~L~~N~-l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N 400 (949)
+|+|++|. +++..|..|..+++|++|+|++|++++..|..|.++++|++|++++|.+++..+..|..+++|++|+|++|
T Consensus 84 ~L~l~~n~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n 163 (285)
T 1ozn_A 84 QLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGN 163 (285)
T ss_dssp EEECCSCTTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred EEeCCCCCCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCC
Confidence 99999997 88777899999999999999999999888999999999999999999999888888999999999999999
Q ss_pred cccCCCCCcccCCcccceeeccCCCccCCCCccccccccccceeeeccccccccCCcccccccchhhcccCccccccccC
Q 039533 401 NLSGTIPPQFFSLSSLSISLDWSRNKLTGSLPIEVGKLKILEFLYVYENRLEGEIPSTFGNCIRLEQLGMGGNLFQGPIS 480 (949)
Q Consensus 401 ~l~~~~p~~~~~l~~l~~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~ 480 (949)
++++..+..+ ..+++|+.|+|++|++++..|..|+.+++|+.|++++|++++..+
T Consensus 164 ~l~~~~~~~~-------------------------~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~ 218 (285)
T 1ozn_A 164 RISSVPERAF-------------------------RGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPT 218 (285)
T ss_dssp CCCEECTTTT-------------------------TTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCH
T ss_pred cccccCHHHh-------------------------cCccccCEEECCCCcccccCHhHccCcccccEeeCCCCcCCcCCH
Confidence 8874333334 444555566666666665556666666666666666666666555
Q ss_pred CCcCCCCCCCEEECCCCcCCCcCcccccCCccceEeCCCCcCcCcccc
Q 039533 481 SSLGSLRGLRVLDLSQNNLSGEIPKFLAGLSLNNLNLSYNDLEGMVTT 528 (949)
Q Consensus 481 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~l~ls~N~l~~~~~~ 528 (949)
..+..+++|+.|+|++|.++...+.......++.+..+.|.+.+..|.
T Consensus 219 ~~~~~l~~L~~L~l~~N~~~c~~~~~~~~~~l~~~~~~~~~~~c~~p~ 266 (285)
T 1ozn_A 219 EALAPLRALQYLRLNDNPWVCDCRARPLWAWLQKFRGSSSEVPCSLPQ 266 (285)
T ss_dssp HHHTTCTTCCEEECCSSCEECSGGGHHHHHHHHHCCSEECCCBEEESG
T ss_pred HHcccCcccCEEeccCCCccCCCCcHHHHHHHHhcccccCccccCCch
Confidence 567777777777777777765443221101145555666666666554
No 315
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.95 E-value=6.6e-30 Score=279.27 Aligned_cols=247 Identities=21% Similarity=0.225 Sum_probs=193.0
Q ss_pred ccCcccEEEccCCCCCccCCchhhcccccccEEEccCcccc-CCCCCCCC-------CCCcccEEEeecceecccCCCcc
Q 039533 267 NATRLTWMHINSNNFGGLLPGCISNLSKTIKTLFLNNNKIY-GSIPAGIG-------NFVNLQRLDMWNNQLSGTIPPAI 338 (949)
Q Consensus 267 ~~~~L~~L~L~~N~l~~~~p~~~~~l~~~L~~L~L~~N~l~-~~~~~~~~-------~l~~L~~L~L~~N~l~~~~p~~~ 338 (949)
..++|+.+++++|.+ .+|..+... |++|+|++|+++ +.+|..+. .+++|++|+|++|++++.+|..+
T Consensus 41 ~~~~L~~l~l~~n~l--~~p~~~~~~---L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~ 115 (312)
T 1wwl_A 41 GGRSLEYLLKRVDTE--ADLGQFTDI---IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPPL 115 (312)
T ss_dssp EEEECTTHHHHCCTT--CCCHHHHHH---HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCCCS
T ss_pred cCCCceeEeeccccc--ccHHHHHHH---HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHHHH
Confidence 445566677777777 566655543 788888888883 45565554 67888889999998888888876
Q ss_pred --cccCCCCEEecCCcccccccCcccccc-----cccceeecccccccccCCCCCCCCCCCcEEEeeCccccCC--CCCc
Q 039533 339 --GELQNLKILGLNRNKLSGNIPPSIGNL-----KMLLNLFLNDNFLEVSIPSSLGQCESLIEINLSNNNLSGT--IPPQ 409 (949)
Q Consensus 339 --~~l~~L~~L~Ls~N~l~~~~p~~~~~l-----~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~--~p~~ 409 (949)
..+++|++|+|++|++++. |..++.+ ++|++|+|++|++++..|..|+++++|++|+|++|++.+. +|..
T Consensus 116 ~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 194 (312)
T 1wwl_A 116 LEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISA 194 (312)
T ss_dssp SSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHHH
T ss_pred HHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHHH
Confidence 7888899999999988876 7778877 8888999999988887878888888999999999887755 2333
Q ss_pred c--cCCcccceeeccCCCccCCC--Cc-cccccccccceeeeccccccccCC-cccccccchhhcccCccccccccCCCc
Q 039533 410 F--FSLSSLSISLDWSRNKLTGS--LP-IEVGKLKILEFLYVYENRLEGEIP-STFGNCIRLEQLGMGGNLFQGPISSSL 483 (949)
Q Consensus 410 ~--~~l~~l~~~L~ls~N~l~~~--~p-~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~l~~N~l~~~~~~~~ 483 (949)
+ ..+++| +.|++++|++++. ++ ..+..+++|++|+|++|++++..| ..+..+++|+.|+|++|+|+ .+|..+
T Consensus 195 ~~~~~l~~L-~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~-~ip~~~ 272 (312)
T 1wwl_A 195 LCPLKFPTL-QVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVPKGL 272 (312)
T ss_dssp SCTTSCTTC-CEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS-SCCSSC
T ss_pred HHhccCCCC-CEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccC-hhhhhc
Confidence 3 677777 7888888888831 22 344577899999999999998775 56677889999999999998 777777
Q ss_pred CCCCCCCEEECCCCcCCCcCcccccCCc-cceEeCCCCcCcCc
Q 039533 484 GSLRGLRVLDLSQNNLSGEIPKFLAGLS-LNNLNLSYNDLEGM 525 (949)
Q Consensus 484 ~~l~~L~~L~Ls~N~l~~~~p~~~~~~~-L~~l~ls~N~l~~~ 525 (949)
. ++|+.|||++|+|++. |. +..++ |++|++++|++++.
T Consensus 273 ~--~~L~~L~Ls~N~l~~~-p~-~~~l~~L~~L~L~~N~l~~~ 311 (312)
T 1wwl_A 273 P--AKLSVLDLSYNRLDRN-PS-PDELPQVGNLSLKGNPFLDS 311 (312)
T ss_dssp C--SEEEEEECCSSCCCSC-CC-TTTSCEEEEEECTTCTTTCC
T ss_pred c--CCceEEECCCCCCCCC-hh-HhhCCCCCEEeccCCCCCCC
Confidence 6 8899999999999876 65 55555 99999999998863
No 316
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.95 E-value=1.1e-27 Score=282.80 Aligned_cols=265 Identities=25% Similarity=0.316 Sum_probs=156.9
Q ss_pred CCceeeccCceeccccCCcccCcccCcEEeeccccccCcCCCCCCCCccceeecCCCccccccccccccCCCCCcEEECC
Q 039533 90 FLKQLYLQVNSFTHEIPSEIGGLRRLKVLALNNNSICGEIPTNISRCSTLIPIHPQNNQLVGKILSRFSSLSKTEILNLG 169 (949)
Q Consensus 90 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~L~~L~~L~Ls 169 (949)
.++.|++++|+++ .+|..+. ++|++|+|++|.|+ .+|. .+ ++|++|+|+
T Consensus 41 ~l~~L~ls~n~L~-~lp~~l~--~~L~~L~L~~N~l~-~lp~---~l------------------------~~L~~L~Ls 89 (622)
T 3g06_A 41 GNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLT-SLPA---LP------------------------PELRTLEVS 89 (622)
T ss_dssp CCCEEECCSSCCS-CCCSCCC--TTCSEEEECSCCCS-CCCC---CC------------------------TTCCEEEEC
T ss_pred CCcEEEecCCCcC-ccChhhC--CCCcEEEecCCCCC-CCCC---cC------------------------CCCCEEEcC
Confidence 4777888888777 6676665 67777888777776 4554 23 445666666
Q ss_pred CCCCCCCCCCCcCCCCCccEEeccccccCCCCCCcccCCCccccccccCcccccccccccCCCCChhhhccccccccccC
Q 039533 170 SNHLTGSIPSSLGNLSSIHTISLAYNNLDGTIPNSFGWFENLVFLSLAANNLSVVENKLTGEVPSLEKLQRLQHFTITSN 249 (949)
Q Consensus 170 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~l~~~~~~l~~l~~L~~L~l~~N 249 (949)
+|+|+ .+|. .+++|++|+|++|+|++ +|. .+++|++|+|++|+|+.++..
T Consensus 90 ~N~l~-~lp~---~l~~L~~L~Ls~N~l~~-l~~---~l~~L~~L~L~~N~l~~lp~~---------------------- 139 (622)
T 3g06_A 90 GNQLT-SLPV---LPPGLLELSIFSNPLTH-LPA---LPSGLCKLWIFGNQLTSLPVL---------------------- 139 (622)
T ss_dssp SCCCS-CCCC---CCTTCCEEEECSCCCCC-CCC---CCTTCCEEECCSSCCSCCCCC----------------------
T ss_pred CCcCC-cCCC---CCCCCCEEECcCCcCCC-CCC---CCCCcCEEECCCCCCCcCCCC----------------------
Confidence 66665 3443 45566666666666663 333 345666666666655433210
Q ss_pred CCCCCCCCCcchhccccccCcccEEEccCCCCCccCCchhhcccccccEEEccCccccCCCCCCCCCCCcccEEEeecce
Q 039533 250 SLGSGGNDDLSFLCSLTNATRLTWMHINSNNFGGLLPGCISNLSKTIKTLFLNNNKIYGSIPAGIGNFVNLQRLDMWNNQ 329 (949)
Q Consensus 250 ~l~~~~~~~~~~~~~l~~~~~L~~L~L~~N~l~~~~p~~~~~l~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~ 329 (949)
+++|++|++++|++++. |. .+.+|+.|++++|+|++ +| ..+++|+.|+|++|.
T Consensus 140 ------------------l~~L~~L~Ls~N~l~~l-~~----~~~~L~~L~L~~N~l~~-l~---~~~~~L~~L~Ls~N~ 192 (622)
T 3g06_A 140 ------------------PPGLQELSVSDNQLASL-PA----LPSELCKLWAYNNQLTS-LP---MLPSGLQELSVSDNQ 192 (622)
T ss_dssp ------------------CTTCCEEECCSSCCSCC-CC----CCTTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSC
T ss_pred ------------------CCCCCEEECcCCcCCCc-CC----ccCCCCEEECCCCCCCC-Cc---ccCCCCcEEECCCCC
Confidence 12344444444444432 22 12457788888888874 45 445778888888888
Q ss_pred ecccCCCcccccCCCCEEecCCcccccccCcccccccccceeecccccccccCCCCCCCCCCCcEEEeeCccccCCCCCc
Q 039533 330 LSGTIPPAIGELQNLKILGLNRNKLSGNIPPSIGNLKMLLNLFLNDNFLEVSIPSSLGQCESLIEINLSNNNLSGTIPPQ 409 (949)
Q Consensus 330 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~ 409 (949)
|++ +|.. +++|+.|++++|+++ .+|.. +++|+.|+|++|.|++ +| ..+++|+.|+|++|+|+ .+|.
T Consensus 193 l~~-l~~~---~~~L~~L~L~~N~l~-~l~~~---~~~L~~L~Ls~N~L~~-lp---~~l~~L~~L~Ls~N~L~-~lp~- 258 (622)
T 3g06_A 193 LAS-LPTL---PSELYKLWAYNNRLT-SLPAL---PSGLKELIVSGNRLTS-LP---VLPSELKELMVSGNRLT-SLPM- 258 (622)
T ss_dssp CSC-CCCC---CTTCCEEECCSSCCS-SCCCC---CTTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCS-CCCC-
T ss_pred CCC-CCCc---cchhhEEECcCCccc-ccCCC---CCCCCEEEccCCccCc-CC---CCCCcCcEEECCCCCCC-cCCc-
Confidence 874 4443 367778888888877 34432 3567777777777764 44 33466677777777666 4454
Q ss_pred ccCCcccceeeccCCCccCCCCccccccccccceeeeccccccccCCcccc
Q 039533 410 FFSLSSLSISLDWSRNKLTGSLPIEVGKLKILEFLYVYENRLEGEIPSTFG 460 (949)
Q Consensus 410 ~~~l~~l~~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 460 (949)
.+++| +.|+|++|+|+ .+|..+.++++|+.|+|++|++++..|..+.
T Consensus 259 --~~~~L-~~L~Ls~N~L~-~lp~~l~~l~~L~~L~L~~N~l~~~~~~~l~ 305 (622)
T 3g06_A 259 --LPSGL-LSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQALR 305 (622)
T ss_dssp --CCTTC-CEEECCSSCCC-SCCGGGGGSCTTCEEECCSCCCCHHHHHHHH
T ss_pred --ccccC-cEEeCCCCCCC-cCCHHHhhccccCEEEecCCCCCCcCHHHHH
Confidence 23344 45555555555 4455555555555555555555554444433
No 317
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.95 E-value=1e-28 Score=270.47 Aligned_cols=269 Identities=18% Similarity=0.187 Sum_probs=191.3
Q ss_pred cEEEEEcCCCCCCccccCCCCCCCCCceeeccCceeccccCCcccCcccCcEEeeccccccCcCCCCCCCCccceeecCC
Q 039533 66 RVTLLDLRSLKLAGSVSHFIGNLSFLKQLYLQVNSFTHEIPSEIGGLRRLKVLALNNNSICGEIPTNISRCSTLIPIHPQ 145 (949)
Q Consensus 66 ~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~ 145 (949)
+....+++.+.+...+...+..+++|++|+|++|++++..|..|+++++|++|+|++|.+++..| +..+++|++|+++
T Consensus 11 ~l~i~~ls~~~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls 88 (317)
T 3o53_A 11 RYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLN 88 (317)
T ss_dssp EEEEESCCTTTHHHHHHHHHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEECC
T ss_pred ceeEeeccccchhhhHHHHhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEECc
Confidence 45666777777765555556677888888888888887777788888888888888888886555 8888888888888
Q ss_pred CccccccccccccCCCCCcEEECCCCCCCCCCCCCcCCCCCccEEeccccccCCCCCCcccCCCccccccccCccccccc
Q 039533 146 NNQLVGKILSRFSSLSKTEILNLGSNHLTGSIPSSLGNLSSIHTISLAYNNLDGTIPNSFGWFENLVFLSLAANNLSVVE 225 (949)
Q Consensus 146 ~n~l~~~~~~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 225 (949)
+|++++.. ..++|++|++++|++++..+.. +++|++|+|++|++++..+..++.+++|++|+|++|.++.+.
T Consensus 89 ~n~l~~l~-----~~~~L~~L~l~~n~l~~~~~~~---~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 160 (317)
T 3o53_A 89 NNYVQELL-----VGPSIETLHAANNNISRVSCSR---GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVN 160 (317)
T ss_dssp SSEEEEEE-----ECTTCCEEECCSSCCSEEEECC---CSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEE
T ss_pred CCcccccc-----CCCCcCEEECCCCccCCcCccc---cCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCccc
Confidence 88887554 3378888888888888655443 567888888888888777777888888888888888776443
Q ss_pred ccccCCCCChhhhccccccccccCCCCCCCCCCcchhccccccCcccEEEccCCCCCccCCchhhcccccccEEEccCcc
Q 039533 226 NKLTGEVPSLEKLQRLQHFTITSNSLGSGGNDDLSFLCSLTNATRLTWMHINSNNFGGLLPGCISNLSKTIKTLFLNNNK 305 (949)
Q Consensus 226 ~~l~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~~~~L~~L~L~~N~l~~~~p~~~~~l~~~L~~L~L~~N~ 305 (949)
.. .+ ...+++|++|++++|++++..+.. .+ ++|++|+|++|+
T Consensus 161 ~~------~~-----------------------------~~~l~~L~~L~L~~N~l~~~~~~~--~l-~~L~~L~Ls~N~ 202 (317)
T 3o53_A 161 FA------EL-----------------------------AASSDTLEHLNLQYNFIYDVKGQV--VF-AKLKTLDLSSNK 202 (317)
T ss_dssp GG------GG-----------------------------GGGTTTCCEEECTTSCCCEEECCC--CC-TTCCEEECCSSC
T ss_pred HH------HH-----------------------------hhccCcCCEEECCCCcCccccccc--cc-ccCCEEECCCCc
Confidence 11 01 113345555556665555442111 12 457777777777
Q ss_pred ccCCCCCCCCCCCcccEEEeecceecccCCCcccccCCCCEEecCCcccc-cccCcccccccccceeeccc-ccccccCC
Q 039533 306 IYGSIPAGIGNFVNLQRLDMWNNQLSGTIPPAIGELQNLKILGLNRNKLS-GNIPPSIGNLKMLLNLFLND-NFLEVSIP 383 (949)
Q Consensus 306 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~L~~-N~l~~~~p 383 (949)
|++ +|..+..+++|++|+|++|+|+ .+|..+..+++|+.|+|++|+++ +.+|..+..+++|+.|++++ +.+++..|
T Consensus 203 l~~-l~~~~~~l~~L~~L~L~~N~l~-~l~~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~~~L~~l~l~~~~~l~~~~~ 280 (317)
T 3o53_A 203 LAF-MGPEFQSAAGVTWISLRNNKLV-LIEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQTVKKLTGQNE 280 (317)
T ss_dssp CCE-ECGGGGGGTTCSEEECTTSCCC-EECTTCCCCTTCCEEECTTCCCBHHHHHHHHHTCHHHHHHHHHHHHHHHSSSS
T ss_pred CCc-chhhhcccCcccEEECcCCccc-chhhHhhcCCCCCEEEccCCCccCcCHHHHHhccccceEEECCCchhccCCch
Confidence 774 3444777778888888888887 46677777788888888888877 66777777778888887773 34555444
Q ss_pred C
Q 039533 384 S 384 (949)
Q Consensus 384 ~ 384 (949)
.
T Consensus 281 ~ 281 (317)
T 3o53_A 281 E 281 (317)
T ss_dssp C
T ss_pred h
Confidence 4
No 318
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.95 E-value=1e-30 Score=313.10 Aligned_cols=420 Identities=13% Similarity=0.037 Sum_probs=309.1
Q ss_pred CcEEEEEcCCCCC---CccccCCCC------------CCCCCceeeccCceeccccCCcccCc--ccCcEEeecccc-cc
Q 039533 65 QRVTLLDLRSLKL---AGSVSHFIG------------NLSFLKQLYLQVNSFTHEIPSEIGGL--RRLKVLALNNNS-IC 126 (949)
Q Consensus 65 ~~v~~l~l~~~~l---~g~~~~~l~------------~l~~L~~L~L~~n~l~~~~p~~~~~l--~~L~~L~Ls~N~-l~ 126 (949)
.++..|+|+++.. .|.+|..++ .+++|++|+|++|.+++..+..+..+ .+|++|+|++|. ++
T Consensus 73 ~~L~~L~L~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~L~~L~L~~~~~~~ 152 (592)
T 3ogk_B 73 PNLRSLKLKGKPRAAMFNLIPENWGGYVTPWVTEISNNLRQLKSVHFRRMIVSDLDLDRLAKARADDLETLKLDKCSGFT 152 (592)
T ss_dssp TTCSEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTTCCEEEEESCBCCHHHHHHHHHHHGGGCCEEEEESCEEEE
T ss_pred CCCeEEEecCCcchhhcccccccccccchHHHHHHHhhCCCCCeEEeeccEecHHHHHHHHHhccccCcEEECcCCCCcC
Confidence 3588899977532 234444433 78999999999999998777777764 459999999987 32
Q ss_pred C-cCCCCCCCCccceeecCCCcccccc----ccccccCCCCCcEEECCCCCCCC----CCCCCcCCCCCccEEecccccc
Q 039533 127 G-EIPTNISRCSTLIPIHPQNNQLVGK----ILSRFSSLSKTEILNLGSNHLTG----SIPSSLGNLSSIHTISLAYNNL 197 (949)
Q Consensus 127 ~-~~p~~~~~l~~L~~L~l~~n~l~~~----~~~~~~~L~~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~L~L~~N~l 197 (949)
. .++..+.++++|++|+|++|.+++. ++..+..+++|++|+|++|.+++ .++..+.++++|++|+|++|.+
T Consensus 153 ~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~ 232 (592)
T 3ogk_B 153 TDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEI 232 (592)
T ss_dssp HHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHHHCTTCCEEECSSCBG
T ss_pred HHHHHHHHhhCCCCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHHhhCCCCcEEeccCccH
Confidence 1 1233345789999999999998766 45567789999999999999983 3344566889999999999999
Q ss_pred CCCCCCcccCCCccccccccCcccccccccccCCCCChhhhccccccccccCCCCCCCCCCcchhccccccCcccEEEcc
Q 039533 198 DGTIPNSFGWFENLVFLSLAANNLSVVENKLTGEVPSLEKLQRLQHFTITSNSLGSGGNDDLSFLCSLTNATRLTWMHIN 277 (949)
Q Consensus 198 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~l~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~~~~L~~L~L~ 277 (949)
.+ +|..+..+++|++|+++.+....-. ......+..+++|+.|+++++... ..+..+..+++|++|+++
T Consensus 233 ~~-l~~~~~~~~~L~~L~l~~~~~~~~~---~~~~~~l~~~~~L~~L~l~~~~~~-------~l~~~~~~~~~L~~L~Ls 301 (592)
T 3ogk_B 233 LE-LVGFFKAAANLEEFCGGSLNEDIGM---PEKYMNLVFPRKLCRLGLSYMGPN-------EMPILFPFAAQIRKLDLL 301 (592)
T ss_dssp GG-GHHHHHHCTTCCEEEECBCCCCTTC---TTSSSCCCCCTTCCEEEETTCCTT-------TGGGGGGGGGGCCEEEET
T ss_pred HH-HHHHHhhhhHHHhhcccccccccch---HHHHHHhhccccccccCccccchh-------HHHHHHhhcCCCcEEecC
Confidence 85 7788999999999999864322110 112234666788888888875332 233456678899999999
Q ss_pred CCCCCccCCch-hhcccccccEEEccCccccCCCCCCCCCCCcccEEEee-----------cceecccC-CCcccccCCC
Q 039533 278 SNNFGGLLPGC-ISNLSKTIKTLFLNNNKIYGSIPAGIGNFVNLQRLDMW-----------NNQLSGTI-PPAIGELQNL 344 (949)
Q Consensus 278 ~N~l~~~~p~~-~~~l~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~-----------~N~l~~~~-p~~~~~l~~L 344 (949)
+|.+++..... +..+ ++|++|+++++...+.++..+..+++|++|+|+ .|.+++.. +..+..+++|
T Consensus 302 ~~~l~~~~~~~~~~~~-~~L~~L~L~~~~~~~~l~~~~~~~~~L~~L~L~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~L 380 (592)
T 3ogk_B 302 YALLETEDHCTLIQKC-PNLEVLETRNVIGDRGLEVLAQYCKQLKRLRIERGADEQGMEDEEGLVSQRGLIALAQGCQEL 380 (592)
T ss_dssp TCCCCHHHHHHHHTTC-TTCCEEEEEGGGHHHHHHHHHHHCTTCCEEEEECCCCSSTTSSTTCCCCHHHHHHHHHHCTTC
T ss_pred CCcCCHHHHHHHHHhC-cCCCEEeccCccCHHHHHHHHHhCCCCCEEEeecCccccccccccCccCHHHHHHHHhhCccC
Confidence 99987654433 3444 579999999433333344445678899999999 46776442 2334568999
Q ss_pred CEEecCCcccccccCccccc-ccccceeecc----ccccccc-----CCCCCCCCCCCcEEEeeCcc--ccCCCCCcccC
Q 039533 345 KILGLNRNKLSGNIPPSIGN-LKMLLNLFLN----DNFLEVS-----IPSSLGQCESLIEINLSNNN--LSGTIPPQFFS 412 (949)
Q Consensus 345 ~~L~Ls~N~l~~~~p~~~~~-l~~L~~L~L~----~N~l~~~-----~p~~~~~l~~L~~L~l~~N~--l~~~~p~~~~~ 412 (949)
+.|+|+.|++++..+..++. +++|+.|+++ .|.+++. ++..+.++++|++|++++|. +++..+..+..
T Consensus 381 ~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~~p~~~~~~~~~~~~~~L~~L~L~~~~~~l~~~~~~~~~~ 460 (592)
T 3ogk_B 381 EYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDLPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLGLSYIGQ 460 (592)
T ss_dssp SEEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCSSCCCHHHHHHHHHHCTTCCEEEEECCGGGCCHHHHHHHHH
T ss_pred eEEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCccccCchHHHHHHHHHHhCCCCCEEEEecCCCCccHHHHHHHHH
Confidence 99999999999887777776 8999999996 6777753 33346678999999998543 66554444444
Q ss_pred -CcccceeeccCCCccCC-CCccccccccccceeeecccccccc-CCcccccccchhhcccCccccccccCCCc-CCCCC
Q 039533 413 -LSSLSISLDWSRNKLTG-SLPIEVGKLKILEFLYVYENRLEGE-IPSTFGNCIRLEQLGMGGNLFQGPISSSL-GSLRG 488 (949)
Q Consensus 413 -l~~l~~~L~ls~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~-~p~~~~~l~~L~~L~l~~N~l~~~~~~~~-~~l~~ 488 (949)
+++| +.|++++|++++ .++..+..+++|+.|+|++|.+++. ++..+..+++|+.|+|++|++++.-...+ ..++.
T Consensus 461 ~~~~L-~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~ls~n~it~~~~~~l~~~~p~ 539 (592)
T 3ogk_B 461 YSPNV-RWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSERAIAAAVTKLPSLRYLWVQGYRASMTGQDLMQMARPY 539 (592)
T ss_dssp SCTTC-CEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCCCBHHHHHHHHHHCSSCCEEEEESCBCCTTCTTGGGGCCTT
T ss_pred hCccc-eEeeccCCCCCHHHHHHHHhcCcccCeeeccCCCCcHHHHHHHHHhcCccCeeECcCCcCCHHHHHHHHHhCCC
Confidence 6667 899999999986 4555668899999999999998755 44455679999999999999986543333 35677
Q ss_pred CCEEECCCC
Q 039533 489 LRVLDLSQN 497 (949)
Q Consensus 489 L~~L~Ls~N 497 (949)
+....+..+
T Consensus 540 l~~~~~~~~ 548 (592)
T 3ogk_B 540 WNIELIPSR 548 (592)
T ss_dssp EEEEEECCC
T ss_pred cEEEEecCc
Confidence 776666655
No 319
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.94 E-value=1.3e-27 Score=276.85 Aligned_cols=238 Identities=20% Similarity=0.189 Sum_probs=151.8
Q ss_pred CCCCCcEEECCCCCCCCCCCCCcCCCCCccEEeccccccCCCCCCcccCCCccccccccCcccccccccccCCCCChhhh
Q 039533 159 SLSKTEILNLGSNHLTGSIPSSLGNLSSIHTISLAYNNLDGTIPNSFGWFENLVFLSLAANNLSVVENKLTGEVPSLEKL 238 (949)
Q Consensus 159 ~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~l~~~~~~l~~l 238 (949)
..++|++|+|++|.+++..|..|+.+++|++|+|++|.+++..| |+.+++|++|+|++|.|+.++.
T Consensus 32 ~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~~------------ 97 (487)
T 3oja_A 32 SAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLV------------ 97 (487)
T ss_dssp TGGGCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEEE------------
T ss_pred cCCCccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCCC------------
Confidence 34467777777777777666777777777777777777775554 6777777777777776553321
Q ss_pred ccccccccccCCCCCCCCCCcchhccccccCcccEEEccCCCCCccCCchhhcccccccEEEccCccccCCCCCCCCCCC
Q 039533 239 QRLQHFTITSNSLGSGGNDDLSFLCSLTNATRLTWMHINSNNFGGLLPGCISNLSKTIKTLFLNNNKIYGSIPAGIGNFV 318 (949)
Q Consensus 239 ~~L~~L~l~~N~l~~~~~~~~~~~~~l~~~~~L~~L~L~~N~l~~~~p~~~~~l~~~L~~L~L~~N~l~~~~~~~~~~l~ 318 (949)
.+ +|++|+|++|.|++..+. .++
T Consensus 98 -----------------------------~~-------------------------~L~~L~L~~N~l~~~~~~---~l~ 120 (487)
T 3oja_A 98 -----------------------------GP-------------------------SIETLHAANNNISRVSCS---RGQ 120 (487)
T ss_dssp -----------------------------CT-------------------------TCCEEECCSSCCCCEEEC---CCS
T ss_pred -----------------------------CC-------------------------CcCEEECcCCcCCCCCcc---ccC
Confidence 01 244444444444433332 234
Q ss_pred cccEEEeecceecccCCCcccccCCCCEEecCCcccccccCcccc-cccccceeecccccccccCCCCCCCCCCCcEEEe
Q 039533 319 NLQRLDMWNNQLSGTIPPAIGELQNLKILGLNRNKLSGNIPPSIG-NLKMLLNLFLNDNFLEVSIPSSLGQCESLIEINL 397 (949)
Q Consensus 319 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~-~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l 397 (949)
+|++|+|++|.|++..|..|+++++|+.|+|++|+|++.+|..+. ++++|+.|+|++|.+++..+ +..+++|+.|+|
T Consensus 121 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~~~~--~~~l~~L~~L~L 198 (487)
T 3oja_A 121 GKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDVKG--QVVFAKLKTLDL 198 (487)
T ss_dssp SCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEEEC--CCCCTTCCEEEC
T ss_pred CCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCccccccc--cccCCCCCEEEC
Confidence 556666666666655555666666666666666666655555554 56666666666666654422 224667777777
Q ss_pred eCccccCCCCCcccCCcccceeeccCCCccCCCCccccccccccceeeecccccc-ccCCcccccccchhhcccCc
Q 039533 398 SNNNLSGTIPPQFFSLSSLSISLDWSRNKLTGSLPIEVGKLKILEFLYVYENRLE-GEIPSTFGNCIRLEQLGMGG 472 (949)
Q Consensus 398 ~~N~l~~~~p~~~~~l~~l~~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~l~~ 472 (949)
++|+|++ +|..+..+++| ..|+|++|.+++ +|..+..+++|+.|++++|.+. +.+|..++.++.|+.|+++.
T Consensus 199 s~N~l~~-~~~~~~~l~~L-~~L~Ls~N~l~~-lp~~l~~l~~L~~L~l~~N~l~c~~~~~~~~~l~~L~~l~~~~ 271 (487)
T 3oja_A 199 SSNKLAF-MGPEFQSAAGV-TWISLRNNKLVL-IEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQT 271 (487)
T ss_dssp CSSCCCE-ECGGGGGGTTC-SEEECTTSCCCE-ECTTCCCCTTCCEEECTTCCBCHHHHHHHHTTCHHHHHHHHHH
T ss_pred CCCCCCC-CCHhHcCCCCc-cEEEecCCcCcc-cchhhccCCCCCEEEcCCCCCcCcchHHHHHhCCCCcEEeccc
Confidence 7777764 44446666666 567777777763 5666777788888888888887 66777788888888888863
No 320
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.94 E-value=7.7e-28 Score=278.85 Aligned_cols=214 Identities=22% Similarity=0.171 Sum_probs=123.4
Q ss_pred cccEEEccCccccCCCCCCCCCCCcccEEEeecceecccCCCcccccCCCCEEecCCcccccccCcccccccccceeecc
Q 039533 295 TIKTLFLNNNKIYGSIPAGIGNFVNLQRLDMWNNQLSGTIPPAIGELQNLKILGLNRNKLSGNIPPSIGNLKMLLNLFLN 374 (949)
Q Consensus 295 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 374 (949)
+|++|+|++|.|++..|..|+.+++|++|+|++|.+++..| |..+++|++|+|++|+|++..+ .++|+.|+++
T Consensus 35 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~~-----~~~L~~L~L~ 107 (487)
T 3oja_A 35 NVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLV-----GPSIETLHAA 107 (487)
T ss_dssp GCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEEE-----CTTCCEEECC
T ss_pred CccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCCC-----CCCcCEEECc
Confidence 45555555555555555555555666666666666654444 5555666666666666553221 2556666666
Q ss_pred cccccccCCCCCCCCCCCcEEEeeCccccCCCCCcccCCcccceeeccCCCccCCCCccccc-cccccceeeeccccccc
Q 039533 375 DNFLEVSIPSSLGQCESLIEINLSNNNLSGTIPPQFFSLSSLSISLDWSRNKLTGSLPIEVG-KLKILEFLYVYENRLEG 453 (949)
Q Consensus 375 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~l~~~L~ls~N~l~~~~p~~~~-~l~~L~~L~Ls~N~l~~ 453 (949)
+|.+++..+.. +++|+.|+|++|++++..|..+..+++| +.|+|++|.+++.+|..+. .+++|+.|+|++|.|++
T Consensus 108 ~N~l~~~~~~~---l~~L~~L~L~~N~l~~~~~~~~~~l~~L-~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~ 183 (487)
T 3oja_A 108 NNNISRVSCSR---GQGKKNIYLANNKITMLRDLDEGCRSRV-QYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYD 183 (487)
T ss_dssp SSCCCCEEECC---CSSCEEEECCSSCCCSGGGBCGGGGSSE-EEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCE
T ss_pred CCcCCCCCccc---cCCCCEEECCCCCCCCCCchhhcCCCCC-CEEECCCCCCCCcChHHHhhhCCcccEEecCCCcccc
Confidence 66665544432 3456666666666665555556566665 5566666666665555554 56666666666666664
Q ss_pred cCCcccccccchhhcccCccccccccCCCcCCCCCCCEEECCCCcCCCcCcccccCCc-cceEeCCCCcCc
Q 039533 454 EIPSTFGNCIRLEQLGMGGNLFQGPISSSLGSLRGLRVLDLSQNNLSGEIPKFLAGLS-LNNLNLSYNDLE 523 (949)
Q Consensus 454 ~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~-L~~l~ls~N~l~ 523 (949)
. |. +..+++|+.|+|++|.|++.+| .+..+++|+.|+|++|+|++ +|..+..++ |+.|++++|++.
T Consensus 184 ~-~~-~~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~L~l~~N~l~ 250 (487)
T 3oja_A 184 V-KG-QVVFAKLKTLDLSSNKLAFMGP-EFQSAAGVTWISLRNNKLVL-IEKALRFSQNLEHFDLRGNGFH 250 (487)
T ss_dssp E-EC-CCCCTTCCEEECCSSCCCEECG-GGGGGTTCSEEECTTSCCCE-ECTTCCCCTTCCEEECTTCCBC
T ss_pred c-cc-cccCCCCCEEECCCCCCCCCCH-hHcCCCCccEEEecCCcCcc-cchhhccCCCCCEEEcCCCCCc
Confidence 4 22 2346666666666666665333 36666666666666666664 444444443 666666666665
No 321
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.94 E-value=4.4e-26 Score=243.47 Aligned_cols=218 Identities=27% Similarity=0.329 Sum_probs=126.1
Q ss_pred CCcceeeeeEEeCCCCcEEEEEcCCCCCCccccCCCCCCCCCceeeccCceeccccCCcccCcccCcEEeeccccccCcC
Q 039533 50 IHFCKWYGVTCSRRHQRVTLLDLRSLKLAGSVSHFIGNLSFLKQLYLQVNSFTHEIPSEIGGLRRLKVLALNNNSICGEI 129 (949)
Q Consensus 50 ~~~C~w~gv~C~~~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 129 (949)
.++|.|.|+.|.-. ..++.+++++++++ .+|..+. ++|++|+|++|++++..+..|.++++|++|+|++|.++...
T Consensus 2 ~~~C~~~~~~C~c~-~~~~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~ 77 (270)
T 2o6q_A 2 EALCKKDGGVCSCN-NNKNSVDCSSKKLT-AIPSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLP 77 (270)
T ss_dssp CCCBGGGTCSBEEE-TTTTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCC
T ss_pred CccCCCCCCCCEeC-CCCCEEEccCCCCC-ccCCCCC--CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeC
Confidence 47899999988643 23556888888887 3555444 56777777777777655566777777777777777776333
Q ss_pred CCCCCCCccceeecCCCccccccccccccCCCCCcEEECCCCCCCCCCCCCcCCCCCccEEeccccccCCCCCCcccCCC
Q 039533 130 PTNISRCSTLIPIHPQNNQLVGKILSRFSSLSKTEILNLGSNHLTGSIPSSLGNLSSIHTISLAYNNLDGTIPNSFGWFE 209 (949)
Q Consensus 130 p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~ 209 (949)
+..|.++++| ++|+|++|++++..+..|.++++|++|+|++|++++..+..|+.++
T Consensus 78 ~~~~~~l~~L------------------------~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~ 133 (270)
T 2o6q_A 78 AGIFKELKNL------------------------ETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLT 133 (270)
T ss_dssp TTTTSSCTTC------------------------CEEECCSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCT
T ss_pred hhhhcCCCCC------------------------CEEECCCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCc
Confidence 3334555555 5555555555544444455555555555555555544444444444
Q ss_pred ccccccccCcccccccccccCCCCChhhhccccccccccCCCCCCCCCCcchhccccccCcccEEEccCCCCCccCCchh
Q 039533 210 NLVFLSLAANNLSVVENKLTGEVPSLEKLQRLQHFTITSNSLGSGGNDDLSFLCSLTNATRLTWMHINSNNFGGLLPGCI 289 (949)
Q Consensus 210 ~L~~L~Ls~N~l~~~~~~l~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~~~~L~~L~L~~N~l~~~~p~~~ 289 (949)
+|++|+|++|.|+.++. ..+
T Consensus 134 ~L~~L~Ls~n~l~~~~~------------------------------------------------------------~~~ 153 (270)
T 2o6q_A 134 KLTYLSLGYNELQSLPK------------------------------------------------------------GVF 153 (270)
T ss_dssp TCCEEECCSSCCCCCCT------------------------------------------------------------TTT
T ss_pred CCCEEECCCCcCCccCH------------------------------------------------------------hHc
Confidence 44444444444332211 011
Q ss_pred hcccccccEEEccCccccCCCCCCCCCCCcccEEEeecceecccCCCcccccCCCCEEecCCccccc
Q 039533 290 SNLSKTIKTLFLNNNKIYGSIPAGIGNFVNLQRLDMWNNQLSGTIPPAIGELQNLKILGLNRNKLSG 356 (949)
Q Consensus 290 ~~l~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 356 (949)
..+ ++|++|+|++|+|++..+..|..+++|++|+|++|+|++..+..|..+++|+.|+|++|.+..
T Consensus 154 ~~l-~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c 219 (270)
T 2o6q_A 154 DKL-TSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWDC 219 (270)
T ss_dssp TTC-TTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCC
T ss_pred cCC-cccceeEecCCcCcEeChhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCeeC
Confidence 111 234445555555554444455666666666666666665555556666667777777776653
No 322
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.94 E-value=3e-28 Score=285.99 Aligned_cols=187 Identities=19% Similarity=0.023 Sum_probs=128.6
Q ss_pred eeeeecCceEEEEEEcCCCEEEEEEEEecCCC----------cchHHHHHHHHHHHhc-CCCcceeEEeeeecccccCCc
Q 039533 633 LVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHH----------GASRSFIAECKALKSI-RHRNLVKVLTACLGADYRGND 701 (949)
Q Consensus 633 ~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~----------~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~ 701 (949)
..+.|+.|.+..++....|+.+|+|++..... ...+++.+|+++|+++ .|+||+++++++.+..
T Consensus 241 ~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~----- 315 (569)
T 4azs_A 241 QPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQ----- 315 (569)
T ss_dssp C-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSS-----
T ss_pred ccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECC-----
Confidence 34567777777666655678899999975421 1225699999999999 7999999999975444
Q ss_pred cceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceE
Q 039533 702 FKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTAR 781 (949)
Q Consensus 702 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~k 781 (949)
..|+||||++|++|.+++.. ...++.. +|+.||+.||+|+|++ |||||||||+|||++++|++|
T Consensus 316 ~~yLVMEyv~G~~L~d~i~~----------~~~l~~~---~I~~QIl~AL~ylH~~---GIIHRDIKPeNILL~~dg~vK 379 (569)
T 4azs_A 316 SGWLVMEKLPGRLLSDMLAA----------GEEIDRE---KILGSLLRSLAALEKQ---GFWHDDVRPWNVMVDARQHAR 379 (569)
T ss_dssp EEEEEEECCCSEEHHHHHHT----------TCCCCHH---HHHHHHHHHHHHHHHT---TCEESCCCGGGEEECTTSCEE
T ss_pred EEEEEEecCCCCcHHHHHHh----------CCCCCHH---HHHHHHHHHHHHHHHC---CceeccCchHhEEECCCCCEE
Confidence 89999999999999999972 2345543 5899999999999988 999999999999999999999
Q ss_pred EeecccceecCCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCCC
Q 039533 782 VGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKPI 843 (949)
Q Consensus 782 l~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf 843 (949)
|+|||+|+......... ....||+.|||||++.+ .+..++|+||+|++++++.++..|+
T Consensus 380 L~DFGlAr~~~~~~~~~--~t~vGTp~YmAPE~l~g-~~~~~~d~~s~g~~~~~l~~~~~~~ 438 (569)
T 4azs_A 380 LIDFGSIVTTPQDCSWP--TNLVQSFFVFVNELFAE-NKSWNGFWRSAPVHPFNLPQPWSNW 438 (569)
T ss_dssp ECCCTTEESCC---CCS--HHHHHHHHHHHHHHC------------------CCCCTTHHHH
T ss_pred EeecccCeeCCCCCccc--cCceechhhccHHHhCC-CCCCcccccccccchhhhccccchh
Confidence 99999998765543322 24569999999999876 4677899999999988876665543
No 323
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.93 E-value=9.9e-26 Score=241.73 Aligned_cols=209 Identities=20% Similarity=0.172 Sum_probs=125.9
Q ss_pred ccccEEEccCccccCCCCCCCCCCCcccEEEeecceecccCCCcccccCCCCEEecCCcccccccCcccccccccceeec
Q 039533 294 KTIKTLFLNNNKIYGSIPAGIGNFVNLQRLDMWNNQLSGTIPPAIGELQNLKILGLNRNKLSGNIPPSIGNLKMLLNLFL 373 (949)
Q Consensus 294 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 373 (949)
++|++|+|++|+|++..+..|..+++|++|+|++|++++..+..|.++++|++|+|++|++++..+..|.++++|++|++
T Consensus 28 ~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l 107 (276)
T 2z62_A 28 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 107 (276)
T ss_dssp TTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEEC
T ss_pred CCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEEC
Confidence 45677777777776655556666777777777777776655666666777777777777776666666666666666666
Q ss_pred ccccccccCCCCCCCCCCCcEEEeeCccccCCCCCcccCCcccceeeccCCCccCCCCccccccccccceeeeccccccc
Q 039533 374 NDNFLEVSIPSSLGQCESLIEINLSNNNLSGTIPPQFFSLSSLSISLDWSRNKLTGSLPIEVGKLKILEFLYVYENRLEG 453 (949)
Q Consensus 374 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~l~~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 453 (949)
++|.+++..+..+..+++|++|++++|++++. .+|..++.+++|+.|+|++|++++
T Consensus 108 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~------------------------~l~~~~~~l~~L~~L~Ls~N~l~~ 163 (276)
T 2z62_A 108 VETNLASLENFPIGHLKTLKELNVAHNLIQSF------------------------KLPEYFSNLTNLEHLDLSSNKIQS 163 (276)
T ss_dssp TTSCCCCSTTCCCTTCTTCCEEECCSSCCCCC------------------------CCCGGGGGCTTCCEEECCSSCCCE
T ss_pred CCCCccccCchhcccCCCCCEEECcCCcccee------------------------cCchhhccCCCCCEEECCCCCCCc
Confidence 66666655555666666666666666666532 134444455555555555555554
Q ss_pred cCCcccccccchh----hcccCccccccccCCCcCCCCCCCEEECCCCcCCCcCcccccCCc-cceEeCCCCcCcCccc
Q 039533 454 EIPSTFGNCIRLE----QLGMGGNLFQGPISSSLGSLRGLRVLDLSQNNLSGEIPKFLAGLS-LNNLNLSYNDLEGMVT 527 (949)
Q Consensus 454 ~~p~~~~~l~~L~----~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~-L~~l~ls~N~l~~~~~ 527 (949)
..+..|..+.+|+ .|++++|.+++..+..+.. .+|+.|+|++|+|++.++..+..++ |+.|++++|++++..+
T Consensus 164 ~~~~~~~~l~~L~~l~l~L~ls~n~l~~~~~~~~~~-~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 241 (276)
T 2z62_A 164 IYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKE-IRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 241 (276)
T ss_dssp ECGGGGHHHHTCTTCCEEEECCSSCCCEECTTSSCS-CCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBCCCTT
T ss_pred CCHHHhhhhhhccccceeeecCCCcccccCccccCC-CcccEEECCCCceeecCHhHhcccccccEEEccCCcccccCC
Confidence 4444555554444 4555666665444433333 3566666666666655555455444 6666666666666544
No 324
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.93 E-value=1.2e-25 Score=240.96 Aligned_cols=225 Identities=23% Similarity=0.252 Sum_probs=180.9
Q ss_pred EEEccCccccCCCCCCCCCCCcccEEEeecceecccCCCcccccCCCCEEecCCcccccccCcccccccccceeeccccc
Q 039533 298 TLFLNNNKIYGSIPAGIGNFVNLQRLDMWNNQLSGTIPPAIGELQNLKILGLNRNKLSGNIPPSIGNLKMLLNLFLNDNF 377 (949)
Q Consensus 298 ~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~ 377 (949)
.++..+..++ .+|..+. ++|++|+|++|++++..+..|.++++|++|+|++|++++..+..|.++++|++|+|++|.
T Consensus 11 ~~~c~~~~l~-~ip~~l~--~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~ 87 (276)
T 2z62_A 11 TYQCMELNFY-KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNP 87 (276)
T ss_dssp EEECTTSCCS-SCCSSSC--TTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCC
T ss_pred eEEecCCCcc-ccCCCCC--CCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCc
Confidence 4566666665 4565543 478888888888887777788888888888888888887666677777777777777777
Q ss_pred ccccCCCCCCCCCCCcEEEeeCccccCCCCCcccCCcccceeeccCCCccCCCCccccccccccceeeecccccccc-CC
Q 039533 378 LEVSIPSSLGQCESLIEINLSNNNLSGTIPPQFFSLSSLSISLDWSRNKLTGSLPIEVGKLKILEFLYVYENRLEGE-IP 456 (949)
Q Consensus 378 l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~l~~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~-~p 456 (949)
+++..+..|.++++|++|++++|++++ ..+..++.+++|++|++++|++++. +|
T Consensus 88 l~~~~~~~~~~l~~L~~L~l~~n~l~~-------------------------~~~~~~~~l~~L~~L~l~~n~l~~~~l~ 142 (276)
T 2z62_A 88 IQSLALGAFSGLSSLQKLVAVETNLAS-------------------------LENFPIGHLKTLKELNVAHNLIQSFKLP 142 (276)
T ss_dssp CCEECTTTTTTCTTCCEEECTTSCCCC-------------------------STTCCCTTCTTCCEEECCSSCCCCCCCC
T ss_pred cCccChhhhcCCccccEEECCCCCccc-------------------------cCchhcccCCCCCEEECcCCccceecCc
Confidence 777766777777777777777776652 3334567788999999999999874 69
Q ss_pred cccccccchhhcccCccccccccCCCcCCCCCCC----EEECCCCcCCCcCcccccCCccceEeCCCCcCcCccccc-cc
Q 039533 457 STFGNCIRLEQLGMGGNLFQGPISSSLGSLRGLR----VLDLSQNNLSGEIPKFLAGLSLNNLNLSYNDLEGMVTTE-GV 531 (949)
Q Consensus 457 ~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~----~L~Ls~N~l~~~~p~~~~~~~L~~l~ls~N~l~~~~~~~-~~ 531 (949)
..|+++++|+.|+|++|++++..+..|..+++|+ .|++++|++++..+..+...+|+.|++++|.+++.++.. ..
T Consensus 143 ~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~l~L~ls~n~l~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~ 222 (276)
T 2z62_A 143 EYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEIRLKELALDTNQLKSVPDGIFDR 222 (276)
T ss_dssp GGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCEEEECCSSCCCEECTTSSCSCCEEEEECCSSCCSCCCTTTTTT
T ss_pred hhhccCCCCCEEECCCCCCCcCCHHHhhhhhhccccceeeecCCCcccccCccccCCCcccEEECCCCceeecCHhHhcc
Confidence 9999999999999999999998888888888887 999999999988888888778999999999999987653 55
Q ss_pred ccccccccccCCCCCCCCC
Q 039533 532 FKNASATRILGNSKLCGGI 550 (949)
Q Consensus 532 ~~~~~~~~~~gn~~~c~~~ 550 (949)
+.++..+.+.+|++.|.-+
T Consensus 223 l~~L~~L~l~~N~~~c~c~ 241 (276)
T 2z62_A 223 LTSLQKIWLHTNPWDCSCP 241 (276)
T ss_dssp CCSCCEEECCSSCBCCCTT
T ss_pred cccccEEEccCCcccccCC
Confidence 7778889999999998643
No 325
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.92 E-value=3.4e-29 Score=300.00 Aligned_cols=430 Identities=13% Similarity=0.103 Sum_probs=245.1
Q ss_pred CcceeeeeEEeCCCCcEEEEEcCCCCCCccccCCCCCCCCCceeeccCceeccc---cCC------------cccCcccC
Q 039533 51 HFCKWYGVTCSRRHQRVTLLDLRSLKLAGSVSHFIGNLSFLKQLYLQVNSFTHE---IPS------------EIGGLRRL 115 (949)
Q Consensus 51 ~~C~w~gv~C~~~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~l~~~---~p~------------~~~~l~~L 115 (949)
=|++|.++... ....+++.+..-. .....+..+++|++|+|+++..... .|. .+..+++|
T Consensus 33 vck~W~~~~~~----~~~~l~~~~~~~~-~~~~~~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~~~~L 107 (594)
T 2p1m_B 33 VCKSWYEIERW----CRRKVFIGNCYAV-SPATVIRRFPKVRSVELKGKPHFADFNLVPDGWGGYVYPWIEAMSSSYTWL 107 (594)
T ss_dssp SCHHHHHHHHH----HCCEEEESSTTSS-CHHHHHHHCTTCCEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTTC
T ss_pred HHHHHHHhhhh----hceEEeecccccc-CHHHHHhhCCCceEEeccCCCchhhcccccccccchhhHHHHHHHHhCCCC
Confidence 35678888211 2344566543321 1123456678899999998753321 221 13467899
Q ss_pred cEEeeccccccCcCCCCCC-CCccceeecCCCc-ccccc-ccccccCCCCCcEEECCCCCCCCCCCCCcC----CCCCcc
Q 039533 116 KVLALNNNSICGEIPTNIS-RCSTLIPIHPQNN-QLVGK-ILSRFSSLSKTEILNLGSNHLTGSIPSSLG----NLSSIH 188 (949)
Q Consensus 116 ~~L~Ls~N~l~~~~p~~~~-~l~~L~~L~l~~n-~l~~~-~~~~~~~L~~L~~L~Ls~N~l~~~~p~~~~----~l~~L~ 188 (949)
++|+|++|.+++..+..+. .+++|++|++++| .+... ++..+..+++|++|+|++|.+++..+..+. .+++|+
T Consensus 108 ~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~~~L~ 187 (594)
T 2p1m_B 108 EEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYTSLV 187 (594)
T ss_dssp CEEEEESCBCCHHHHHHHHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTCCCCC
T ss_pred CeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcCCcCc
Confidence 9999999998877776665 6889999999988 55543 445556899999999999998865544443 667899
Q ss_pred EEeccccc--cCC-CCCCcccCCCccccccccCc-ccccccccccCCCC-ChhhhccccccccccCCCCCCCCCCcchhc
Q 039533 189 TISLAYNN--LDG-TIPNSFGWFENLVFLSLAAN-NLSVVENKLTGEVP-SLEKLQRLQHFTITSNSLGSGGNDDLSFLC 263 (949)
Q Consensus 189 ~L~L~~N~--l~~-~~p~~~~~l~~L~~L~Ls~N-~l~~~~~~l~~~~~-~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~ 263 (949)
+|+|++|. ++. .++..+..+++|++|+|++| .++. ++ .+..+++|++|+++.+.........-....
T Consensus 188 ~L~l~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~~--------l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~l~~ 259 (594)
T 2p1m_B 188 SLNISCLASEVSFSALERLVTRCPNLKSLKLNRAVPLEK--------LATLLQRAPQLEELGTGGYTAEVRPDVYSGLSV 259 (594)
T ss_dssp EEECTTCCSCCCHHHHHHHHHHCTTCCEEECCTTSCHHH--------HHHHHHHCTTCSEEECSBCCCCCCHHHHHHHHH
T ss_pred EEEecccCCcCCHHHHHHHHHhCCCCcEEecCCCCcHHH--------HHHHHhcCCcceEcccccccCccchhhHHHHHH
Confidence 99999987 221 11122345689999999987 2221 22 255677888888765542111111111223
Q ss_pred cccccCcccEE-EccCCCCCccCCchhhcccccccEEEccCccccCCCC-CCCCCCCcccEEEeecceeccc-CCCcccc
Q 039533 264 SLTNATRLTWM-HINSNNFGGLLPGCISNLSKTIKTLFLNNNKIYGSIP-AGIGNFVNLQRLDMWNNQLSGT-IPPAIGE 340 (949)
Q Consensus 264 ~l~~~~~L~~L-~L~~N~l~~~~p~~~~~l~~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~-~p~~~~~ 340 (949)
.+.++++|+.+ .+.... .+.++..+..+ ++|++|+|++|.+++... ..+..+++|++|++++| ++.. ++.....
T Consensus 260 ~l~~~~~L~~Ls~~~~~~-~~~l~~~~~~~-~~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~-~~~~~l~~l~~~ 336 (594)
T 2p1m_B 260 ALSGCKELRCLSGFWDAV-PAYLPAVYSVC-SRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDY-IEDAGLEVLAST 336 (594)
T ss_dssp HHHTCTTCCEEECCBTCC-GGGGGGGHHHH-TTCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEEGG-GHHHHHHHHHHH
T ss_pred HHhcCCCcccccCCcccc-hhhHHHHHHhh-CCCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCcCc-cCHHHHHHHHHh
Confidence 45677778777 333322 22334433344 468888888888764322 22457788888888888 4422 2223335
Q ss_pred cCCCCEEec---------CCcccccccCcccc-cccccceeecccccccccCCCCCC-CCCCCcEEEee--C----cccc
Q 039533 341 LQNLKILGL---------NRNKLSGNIPPSIG-NLKMLLNLFLNDNFLEVSIPSSLG-QCESLIEINLS--N----NNLS 403 (949)
Q Consensus 341 l~~L~~L~L---------s~N~l~~~~p~~~~-~l~~L~~L~L~~N~l~~~~p~~~~-~l~~L~~L~l~--~----N~l~ 403 (949)
+++|+.|+| +.|.+++.....+. ++++|+.|.++.|.+++..+..+. .+++|+.|+++ + |+++
T Consensus 337 ~~~L~~L~L~~~~~~g~~~~~~l~~~~l~~l~~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~ 416 (594)
T 2p1m_B 337 CKDLRELRVFPSEPFVMEPNVALTEQGLVSVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLT 416 (594)
T ss_dssp CTTCCEEEEECSCTTCSSCSSCCCHHHHHHHHHHCTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTT
T ss_pred CCCCCEEEEecCcccccccCCCCCHHHHHHHHHhchhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCccccc
Confidence 788888888 34556543333333 477888888877877765544444 47788888888 3 4444
Q ss_pred CCCCC------cccCCcccceeeccCCCccCCCCcccccc-ccccceeeeccccccccCCccc-ccccchhhcccCcccc
Q 039533 404 GTIPP------QFFSLSSLSISLDWSRNKLTGSLPIEVGK-LKILEFLYVYENRLEGEIPSTF-GNCIRLEQLGMGGNLF 475 (949)
Q Consensus 404 ~~~p~------~~~~l~~l~~~L~ls~N~l~~~~p~~~~~-l~~L~~L~Ls~N~l~~~~p~~~-~~l~~L~~L~l~~N~l 475 (949)
..|. .+..+++| +.|++++ .+++..+..+.. +++|+.|+|++|.+++..+..+ ..+++|+.|+|++|.+
T Consensus 417 -~~~~~~~~~~l~~~~~~L-~~L~L~~-~l~~~~~~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~ 493 (594)
T 2p1m_B 417 -LEPLDIGFGAIVEHCKDL-RRLSLSG-LLTDKVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPF 493 (594)
T ss_dssp -CCCTHHHHHHHHHHCTTC-CEEECCS-SCCHHHHHHHHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSC
T ss_pred -CCchhhHHHHHHhhCCCc-cEEeecC-cccHHHHHHHHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCC
Confidence 1111 12233444 4455544 333333333333 4445555555555443333222 3344444444444444
Q ss_pred ccccCC-CcCCCCCCCEEECCCCcC
Q 039533 476 QGPISS-SLGSLRGLRVLDLSQNNL 499 (949)
Q Consensus 476 ~~~~~~-~~~~l~~L~~L~Ls~N~l 499 (949)
++.... .+..+++|+.|++++|++
T Consensus 494 ~~~~~~~~~~~l~~L~~L~l~~~~~ 518 (594)
T 2p1m_B 494 GDKALLANASKLETMRSLWMSSCSV 518 (594)
T ss_dssp CHHHHHHTGGGGGGSSEEEEESSCC
T ss_pred cHHHHHHHHHhCCCCCEEeeeCCCC
Confidence 322221 122244444444444444
No 326
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.92 E-value=2.6e-24 Score=229.72 Aligned_cols=202 Identities=28% Similarity=0.331 Sum_probs=105.6
Q ss_pred ccEEEccCccccCCCCCCCCCCCcccEEEeecceecccCCCcccccCCCCEEecCCcccccccCcccccccccceeeccc
Q 039533 296 IKTLFLNNNKIYGSIPAGIGNFVNLQRLDMWNNQLSGTIPPAIGELQNLKILGLNRNKLSGNIPPSIGNLKMLLNLFLND 375 (949)
Q Consensus 296 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 375 (949)
.+++++++|+++ .+|..+. ++|++|+|++|++++..+..|.++++|++|+|++|+++...+..|.++++|++|+|++
T Consensus 18 ~~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~ 94 (270)
T 2o6q_A 18 KNSVDCSSKKLT-AIPSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTD 94 (270)
T ss_dssp TTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECCS
T ss_pred CCEEEccCCCCC-ccCCCCC--CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECCC
Confidence 344555555554 2343332 3455555555555544444555555555555555555543334445555555555555
Q ss_pred ccccccCCCCCCCCCCCcEEEeeCccccCCCCCcccCCcccceeeccCCCccCCCCccccccccccceeeeccccccccC
Q 039533 376 NFLEVSIPSSLGQCESLIEINLSNNNLSGTIPPQFFSLSSLSISLDWSRNKLTGSLPIEVGKLKILEFLYVYENRLEGEI 455 (949)
Q Consensus 376 N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~l~~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 455 (949)
|.+++..+..|..+++|++|++++|++++..|..|..+++| +.|++++|++++..+..+..+++|+.|+|++|++++..
T Consensus 95 n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L-~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~ 173 (270)
T 2o6q_A 95 NKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKL-TYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVP 173 (270)
T ss_dssp SCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTC-CEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCC
T ss_pred CcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCC-CEEECCCCcCCccCHhHccCCcccceeEecCCcCcEeC
Confidence 55554444455555555555555555554333334444444 34444444444333334555555666666666665444
Q ss_pred CcccccccchhhcccCccccccccCCCcCCCCCCCEEECCCCcCCC
Q 039533 456 PSTFGNCIRLEQLGMGGNLFQGPISSSLGSLRGLRVLDLSQNNLSG 501 (949)
Q Consensus 456 p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 501 (949)
+..|..+++|+.|+|++|++++..+..|..+++|+.|+|++|.+..
T Consensus 174 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c 219 (270)
T 2o6q_A 174 EGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWDC 219 (270)
T ss_dssp TTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCC
T ss_pred hhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCeeC
Confidence 4455555555555555555555444455555666666666665543
No 327
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.92 E-value=1.3e-24 Score=232.35 Aligned_cols=207 Identities=24% Similarity=0.263 Sum_probs=104.9
Q ss_pred ccCcccEEEccCCCCCccCCchhhcccccccEEEccCccccCCCCCCCCCCCcccEEEeecceecccCCCcccccCCCCE
Q 039533 267 NATRLTWMHINSNNFGGLLPGCISNLSKTIKTLFLNNNKIYGSIPAGIGNFVNLQRLDMWNNQLSGTIPPAIGELQNLKI 346 (949)
Q Consensus 267 ~~~~L~~L~L~~N~l~~~~p~~~~~l~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 346 (949)
.+++|+.|++++|.++.. ..+..+ ++|++|+|++|++++. ..+..+++|++|+|++|.+++..+..|.++++|++
T Consensus 39 ~l~~L~~L~l~~~~i~~~--~~l~~l-~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 113 (272)
T 3rfs_A 39 ELNSIDQIIANNSDIKSV--QGIQYL-PNVRYLALGGNKLHDI--SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKE 113 (272)
T ss_dssp HHTTCCEEECTTSCCCCC--TTGGGC-TTCCEEECTTSCCCCC--GGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCE
T ss_pred cccceeeeeeCCCCcccc--cccccC-CCCcEEECCCCCCCCc--hhhcCCCCCCEEECCCCccCccChhHhcCCcCCCE
Confidence 344455555555554422 123333 2355555555555532 24555555555555555555554555555555555
Q ss_pred EecCCcccccccCcccccccccceeecccccccccCCCCCCCCCCCcEEEeeCccccCCCCCcccCCcccceeeccCCCc
Q 039533 347 LGLNRNKLSGNIPPSIGNLKMLLNLFLNDNFLEVSIPSSLGQCESLIEINLSNNNLSGTIPPQFFSLSSLSISLDWSRNK 426 (949)
Q Consensus 347 L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~l~~~L~ls~N~ 426 (949)
|+|++|++++..+..|.++++|++|++++|.+++..+..|..+++|++|++++|++++..+..+..+++| +.|++++|+
T Consensus 114 L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L-~~L~L~~N~ 192 (272)
T 3rfs_A 114 LVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQL-KDLRLYQNQ 192 (272)
T ss_dssp EECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTC-CEEECCSSC
T ss_pred EECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccC-CEEECCCCc
Confidence 5555555555444445555555555555555555444455555555555555555554444444444444 445555555
Q ss_pred cCCCCccccccccccceeeeccccccccCCcccccccchhhcccCccccccccCCCcCCC
Q 039533 427 LTGSLPIEVGKLKILEFLYVYENRLEGEIPSTFGNCIRLEQLGMGGNLFQGPISSSLGSL 486 (949)
Q Consensus 427 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l 486 (949)
+++..|..+..+++|+.|+|++|.+.+. +++|+.|+++.|.++|.+|.+++.+
T Consensus 193 l~~~~~~~~~~l~~L~~L~l~~N~~~~~-------~~~l~~l~~~~n~~~g~ip~~~~~~ 245 (272)
T 3rfs_A 193 LKSVPDGVFDRLTSLQYIWLHDNPWDCT-------CPGIRYLSEWINKHSGVVRNSAGSV 245 (272)
T ss_dssp CSCCCTTTTTTCTTCCEEECCSSCBCCC-------TTTTHHHHHHHHHTGGGBBCTTSCB
T ss_pred CCccCHHHHhCCcCCCEEEccCCCcccc-------CcHHHHHHHHHHhCCCcccCccccc
Confidence 5544444445555555555555554432 2234445555555555554444433
No 328
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.91 E-value=3.3e-24 Score=230.85 Aligned_cols=200 Identities=24% Similarity=0.207 Sum_probs=112.0
Q ss_pred cccEEEccCccccCCCCCCCCCCCcccEEEeecceecccCCCcccccCCCCEEecCCcccccccCcccccccccceeecc
Q 039533 295 TIKTLFLNNNKIYGSIPAGIGNFVNLQRLDMWNNQLSGTIPPAIGELQNLKILGLNRNKLSGNIPPSIGNLKMLLNLFLN 374 (949)
Q Consensus 295 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 374 (949)
+++++++++|+++ .+|..+. +++++|+|++|.|++..|..|.++++|+.|+|++|+|++..+. +.+
T Consensus 11 ~l~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~--~~l--------- 76 (290)
T 1p9a_G 11 SHLEVNCDKRNLT-ALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVD--GTL--------- 76 (290)
T ss_dssp TCCEEECTTSCCS-SCCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEECC--SCC---------
T ss_pred CccEEECCCCCCC-cCCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccCC--CCC---------
Confidence 3555555555555 3343332 3555555555555555555555555555555555555533221 344
Q ss_pred cccccccCCCCCCCCCCCcEEEeeCccccCCCCCcccCCcccceeeccCCCccCCCCccccccccccceeeecccccccc
Q 039533 375 DNFLEVSIPSSLGQCESLIEINLSNNNLSGTIPPQFFSLSSLSISLDWSRNKLTGSLPIEVGKLKILEFLYVYENRLEGE 454 (949)
Q Consensus 375 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~l~~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 454 (949)
++|++|++++|+++ .+|..+..+++| +.|++++|++++..|..|..+++|++|+|++|+|++.
T Consensus 77 ---------------~~L~~L~Ls~N~l~-~l~~~~~~l~~L-~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~ 139 (290)
T 1p9a_G 77 ---------------PVLGTLDLSHNQLQ-SLPLLGQTLPAL-TVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTL 139 (290)
T ss_dssp ---------------TTCCEEECCSSCCS-SCCCCTTTCTTC-CEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCC
T ss_pred ---------------CcCCEEECCCCcCC-cCchhhccCCCC-CEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCcc
Confidence 44555555555554 444444444544 4455555555544455566666666666666666655
Q ss_pred CCcccccccchhhcccCccccccccCCCcCCCCCCCEEECCCCcCCCcCcccccCCccceEeCCCCcCcCc
Q 039533 455 IPSTFGNCIRLEQLGMGGNLFQGPISSSLGSLRGLRVLDLSQNNLSGEIPKFLAGLSLNNLNLSYNDLEGM 525 (949)
Q Consensus 455 ~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~l~ls~N~l~~~ 525 (949)
.+..|..+++|+.|+|++|+|++..+..|..+++|+.|+|++|+|+...+..+....|+.++|++|++...
T Consensus 140 ~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~ip~~~~~~~~L~~l~L~~Np~~C~ 210 (290)
T 1p9a_G 140 PPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLYTIPKGFFGSHLLPFAFLHGNPWLCN 210 (290)
T ss_dssp CTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCCCSEEECCSCCBCCS
T ss_pred ChhhcccccCCCEEECCCCcCCccCHHHhcCcCCCCEEECCCCcCCccChhhcccccCCeEEeCCCCccCc
Confidence 55556666666666666666665555556667777777777777763333333333377777777776553
No 329
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.91 E-value=2.3e-24 Score=230.31 Aligned_cols=213 Identities=18% Similarity=0.227 Sum_probs=170.3
Q ss_pred hhhhccccccccccCCCCCCCCCCcchhccccccCcccEEEccCCCCCccCCchhhcccccccEEEccCccccCCCCCCC
Q 039533 235 LEKLQRLQHFTITSNSLGSGGNDDLSFLCSLTNATRLTWMHINSNNFGGLLPGCISNLSKTIKTLFLNNNKIYGSIPAGI 314 (949)
Q Consensus 235 l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~~~~L~~L~L~~N~l~~~~p~~~~~l~~~L~~L~L~~N~l~~~~~~~~ 314 (949)
+..+++|+.|++++|.++.. ..+..+++|++|++++|++++. ..+..+ ++|++|+|++|++++..+..|
T Consensus 37 ~~~l~~L~~L~l~~~~i~~~--------~~l~~l~~L~~L~l~~n~l~~~--~~l~~l-~~L~~L~L~~n~l~~~~~~~~ 105 (272)
T 3rfs_A 37 QNELNSIDQIIANNSDIKSV--------QGIQYLPNVRYLALGGNKLHDI--SALKEL-TNLTYLILTGNQLQSLPNGVF 105 (272)
T ss_dssp HHHHTTCCEEECTTSCCCCC--------TTGGGCTTCCEEECTTSCCCCC--GGGTTC-TTCCEEECTTSCCCCCCTTTT
T ss_pred cccccceeeeeeCCCCcccc--------cccccCCCCcEEECCCCCCCCc--hhhcCC-CCCCEEECCCCccCccChhHh
Confidence 45666666666666666542 2355677788888888887763 355665 468888888888887777778
Q ss_pred CCCCcccEEEeecceecccCCCcccccCCCCEEecCCcccccccCcccccccccceeecccccccccCCCCCCCCCCCcE
Q 039533 315 GNFVNLQRLDMWNNQLSGTIPPAIGELQNLKILGLNRNKLSGNIPPSIGNLKMLLNLFLNDNFLEVSIPSSLGQCESLIE 394 (949)
Q Consensus 315 ~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 394 (949)
..+++|++|+|++|++++..+..|.++++|++|+|++|++++..+..+.++++|+.|++++|++++..+..|..+++|++
T Consensus 106 ~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~ 185 (272)
T 3rfs_A 106 DKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKD 185 (272)
T ss_dssp TTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCE
T ss_pred cCCcCCCEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCE
Confidence 88889999999999998777777888889999999999988777777888899999999999988877777888899999
Q ss_pred EEeeCccccCCCCCcccCCcccceeeccCCCccCCCCccccccccccceeeeccccccccCCcccccccchh
Q 039533 395 INLSNNNLSGTIPPQFFSLSSLSISLDWSRNKLTGSLPIEVGKLKILEFLYVYENRLEGEIPSTFGNCIRLE 466 (949)
Q Consensus 395 L~l~~N~l~~~~p~~~~~l~~l~~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 466 (949)
|++++|++++..|..+..+++| +.|++++|.+.+. +++|++|+++.|.++|.+|.+++.+....
T Consensus 186 L~L~~N~l~~~~~~~~~~l~~L-~~L~l~~N~~~~~-------~~~l~~l~~~~n~~~g~ip~~~~~~~~~~ 249 (272)
T 3rfs_A 186 LRLYQNQLKSVPDGVFDRLTSL-QYIWLHDNPWDCT-------CPGIRYLSEWINKHSGVVRNSAGSVAPDS 249 (272)
T ss_dssp EECCSSCCSCCCTTTTTTCTTC-CEEECCSSCBCCC-------TTTTHHHHHHHHHTGGGBBCTTSCBCGGG
T ss_pred EECCCCcCCccCHHHHhCCcCC-CEEEccCCCcccc-------CcHHHHHHHHHHhCCCcccCcccccCCCC
Confidence 9999999987777777888888 7899999988754 44688999999999999999988776543
No 330
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.91 E-value=9.6e-29 Score=296.13 Aligned_cols=423 Identities=12% Similarity=0.115 Sum_probs=288.3
Q ss_pred CcEEEEEcCCCCCCccc---c------------CCCCCCCCCceeeccCceeccccCCccc-CcccCcEEeeccc-cccC
Q 039533 65 QRVTLLDLRSLKLAGSV---S------------HFIGNLSFLKQLYLQVNSFTHEIPSEIG-GLRRLKVLALNNN-SICG 127 (949)
Q Consensus 65 ~~v~~l~l~~~~l~g~~---~------------~~l~~l~~L~~L~L~~n~l~~~~p~~~~-~l~~L~~L~Ls~N-~l~~ 127 (949)
.++..|+|+++.....+ + .....+++|++|+|++|.+++..+..+. .+++|++|+|++| .++.
T Consensus 66 ~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~ 145 (594)
T 2p1m_B 66 PKVRSVELKGKPHFADFNLVPDGWGGYVYPWIEAMSSSYTWLEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFST 145 (594)
T ss_dssp TTCCEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTTCCEEEEESCBCCHHHHHHHHHHCTTCCEEEEESCEEEEH
T ss_pred CCceEEeccCCCchhhcccccccccchhhHHHHHHHHhCCCCCeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCCH
Confidence 35778888876532211 1 1124678999999999999887777776 6899999999999 5653
Q ss_pred c-CCCCCCCCccceeecCCCcccccccccccc----CCCCCcEEECCCCC--CCCC-CCCCcCCCCCccEEecccc-ccC
Q 039533 128 E-IPTNISRCSTLIPIHPQNNQLVGKILSRFS----SLSKTEILNLGSNH--LTGS-IPSSLGNLSSIHTISLAYN-NLD 198 (949)
Q Consensus 128 ~-~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~----~L~~L~~L~Ls~N~--l~~~-~p~~~~~l~~L~~L~L~~N-~l~ 198 (949)
. ++..+.++++|++|++++|.+++..+..+. .+++|+.|+|++|. ++.. ++..+.++++|++|+|++| .++
T Consensus 146 ~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~~~L~~L~l~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~ 225 (594)
T 2p1m_B 146 DGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYTSLVSLNISCLASEVSFSALERLVTRCPNLKSLKLNRAVPLE 225 (594)
T ss_dssp HHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTCCCCCEEECTTCCSCCCHHHHHHHHHHCTTCCEEECCTTSCHH
T ss_pred HHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcCCcCcEEEecccCCcCCHHHHHHHHHhCCCCcEEecCCCCcHH
Confidence 3 455556899999999999998876554443 66799999999997 2211 1112245689999999998 455
Q ss_pred CCCCCcccCCCccccccccCcccccccccccCCCCChhhhcccccc-ccccCCCCCCCCCCcchhccccccCcccEEEcc
Q 039533 199 GTIPNSFGWFENLVFLSLAANNLSVVENKLTGEVPSLEKLQRLQHF-TITSNSLGSGGNDDLSFLCSLTNATRLTWMHIN 277 (949)
Q Consensus 199 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~l~~~~~~l~~l~~L~~L-~l~~N~l~~~~~~~~~~~~~l~~~~~L~~L~L~ 277 (949)
+ +|..+..+++|++|+++.+....-.+.+.+..+.+.++++|+.+ .+.+... -.+...+..+++|+.|+++
T Consensus 226 ~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~l~~~l~~~~~L~~Ls~~~~~~~-------~~l~~~~~~~~~L~~L~L~ 297 (594)
T 2p1m_B 226 K-LATLLQRAPQLEELGTGGYTAEVRPDVYSGLSVALSGCKELRCLSGFWDAVP-------AYLPAVYSVCSRLTTLNLS 297 (594)
T ss_dssp H-HHHHHHHCTTCSEEECSBCCCCCCHHHHHHHHHHHHTCTTCCEEECCBTCCG-------GGGGGGHHHHTTCCEEECT
T ss_pred H-HHHHHhcCCcceEcccccccCccchhhHHHHHHHHhcCCCcccccCCcccch-------hhHHHHHHhhCCCCEEEcc
Confidence 4 77888889999999977654322223333333346667777776 3332211 1122223467889999999
Q ss_pred CCCCCccCCch-hhcccccccEEEccCccccCC-CCCCCCCCCcccEEEeec---------ceecccCCCccc-ccCCCC
Q 039533 278 SNNFGGLLPGC-ISNLSKTIKTLFLNNNKIYGS-IPAGIGNFVNLQRLDMWN---------NQLSGTIPPAIG-ELQNLK 345 (949)
Q Consensus 278 ~N~l~~~~p~~-~~~l~~~L~~L~L~~N~l~~~-~~~~~~~l~~L~~L~L~~---------N~l~~~~p~~~~-~l~~L~ 345 (949)
+|.+++..... +..+ ++|++|++++| +... ++.....+++|++|+|++ |.+++.....+. ++++|+
T Consensus 298 ~~~l~~~~l~~~~~~~-~~L~~L~l~~~-~~~~~l~~l~~~~~~L~~L~L~~~~~~g~~~~~~l~~~~l~~l~~~~~~L~ 375 (594)
T 2p1m_B 298 YATVQSYDLVKLLCQC-PKLQRLWVLDY-IEDAGLEVLASTCKDLRELRVFPSEPFVMEPNVALTEQGLVSVSMGCPKLE 375 (594)
T ss_dssp TCCCCHHHHHHHHTTC-TTCCEEEEEGG-GHHHHHHHHHHHCTTCCEEEEECSCTTCSSCSSCCCHHHHHHHHHHCTTCC
T ss_pred CCCCCHHHHHHHHhcC-CCcCEEeCcCc-cCHHHHHHHHHhCCCCCEEEEecCcccccccCCCCCHHHHHHHHHhchhHH
Confidence 99877543333 3344 57999999988 4422 222233578899999843 556543333333 478999
Q ss_pred EEecCCcccccccCcccc-cccccceeecc--c----cccccc-----CCCCCCCCCCCcEEEeeCccccCCCCCcccC-
Q 039533 346 ILGLNRNKLSGNIPPSIG-NLKMLLNLFLN--D----NFLEVS-----IPSSLGQCESLIEINLSNNNLSGTIPPQFFS- 412 (949)
Q Consensus 346 ~L~Ls~N~l~~~~p~~~~-~l~~L~~L~L~--~----N~l~~~-----~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~- 412 (949)
.|+++.|++++..+..+. ++++|+.|+++ + |.++.. ++..+..+++|+.|+|++ .+++..+..+..
T Consensus 376 ~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~l~~~~~~L~~L~L~~-~l~~~~~~~l~~~ 454 (594)
T 2p1m_B 376 SVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEPLDIGFGAIVEHCKDLRRLSLSG-LLTDKVFEYIGTY 454 (594)
T ss_dssp EEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTCCCTHHHHHHHHHHCTTCCEEECCS-SCCHHHHHHHHHH
T ss_pred HHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcccccCCchhhHHHHHHhhCCCccEEeecC-cccHHHHHHHHHh
Confidence 999999999876666665 58899999998 4 555521 112256778999999977 666554445554
Q ss_pred CcccceeeccCCCccCCCCcccc-ccccccceeeeccccccccCCc-ccccccchhhcccCccccccccCCCc-CCCCCC
Q 039533 413 LSSLSISLDWSRNKLTGSLPIEV-GKLKILEFLYVYENRLEGEIPS-TFGNCIRLEQLGMGGNLFQGPISSSL-GSLRGL 489 (949)
Q Consensus 413 l~~l~~~L~ls~N~l~~~~p~~~-~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~l~~N~l~~~~~~~~-~~l~~L 489 (949)
+++| +.|++++|.+++..+..+ ..+++|+.|+|++|.+++..+. .+..+++|+.|++++|.++......+ ..+++|
T Consensus 455 ~~~L-~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~l~~~lp~l 533 (594)
T 2p1m_B 455 AKKM-EMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFGDKALLANASKLETMRSLWMSSCSVSFGACKLLGQKMPKL 533 (594)
T ss_dssp CTTC-CEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSCCHHHHHHTGGGGGGSSEEEEESSCCBHHHHHHHHHHCTTE
T ss_pred chhc-cEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCCcHHHHHHHHHhCCCCCEEeeeCCCCCHHHHHHHHHhCCCC
Confidence 6677 789999999987655555 6789999999999999655444 44568999999999999864433334 456777
Q ss_pred CEEECCCCcC
Q 039533 490 RVLDLSQNNL 499 (949)
Q Consensus 490 ~~L~Ls~N~l 499 (949)
+...+..+.-
T Consensus 534 ~i~~~~~~~~ 543 (594)
T 2p1m_B 534 NVEVIDERGA 543 (594)
T ss_dssp EEEEECSSSC
T ss_pred EEEEecCCCc
Confidence 7666665543
No 331
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.91 E-value=2e-24 Score=227.90 Aligned_cols=191 Identities=25% Similarity=0.305 Sum_probs=164.3
Q ss_pred CcceeeeeEEeCCCCcEEEEEcCCCCCCccccCCCCCCCCCceeeccCceeccccCCcccCcccCcEEeeccccccCcCC
Q 039533 51 HFCKWYGVTCSRRHQRVTLLDLRSLKLAGSVSHFIGNLSFLKQLYLQVNSFTHEIPSEIGGLRRLKVLALNNNSICGEIP 130 (949)
Q Consensus 51 ~~C~w~gv~C~~~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 130 (949)
+||.|.|++|... .+.+|+++++++ .+|..+. ++|+.|+|++|++++..|..|+++++|++|+|++|.|++..|
T Consensus 3 ~Cp~~~gC~C~~~---~~~l~~~~~~l~-~~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~ 76 (251)
T 3m19_A 3 TCETVTGCTCNEG---KKEVDCQGKSLD-SVPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSA 76 (251)
T ss_dssp -CHHHHSSEEEGG---GTEEECTTCCCS-SCCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCT
T ss_pred cCCCCCceEcCCC---CeEEecCCCCcc-ccCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCH
Confidence 6899999999753 346899999998 5666665 689999999999999888899999999999999999998888
Q ss_pred CCCCCCccceeecCCCccccccccccccCCCCCcEEECCCCCCCCCCCCCcCCCCCccEEeccccccCCCCCCcccCCCc
Q 039533 131 TNISRCSTLIPIHPQNNQLVGKILSRFSSLSKTEILNLGSNHLTGSIPSSLGNLSSIHTISLAYNNLDGTIPNSFGWFEN 210 (949)
Q Consensus 131 ~~~~~l~~L~~L~l~~n~l~~~~~~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 210 (949)
..|.++++|++|++++|++++..+..|..+++|++|+|++|+|++..+..|..+++|++|+|++|+|++..+..|+.+++
T Consensus 77 ~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 156 (251)
T 3m19_A 77 GVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTN 156 (251)
T ss_dssp TTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTT
T ss_pred hHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcC
Confidence 88999999999999999999999999999999999999999999777777899999999999999999887878999999
Q ss_pred cccccccCcccccccccccCCCCChhhhccccccccccCCCCC
Q 039533 211 LVFLSLAANNLSVVENKLTGEVPSLEKLQRLQHFTITSNSLGS 253 (949)
Q Consensus 211 L~~L~Ls~N~l~~~~~~l~~~~~~l~~l~~L~~L~l~~N~l~~ 253 (949)
|++|+|++|+|+.++.. .+..+++|++|++++|.+..
T Consensus 157 L~~L~L~~N~l~~~~~~------~~~~l~~L~~L~l~~N~~~c 193 (251)
T 3m19_A 157 LQTLSLSTNQLQSVPHG------AFDRLGKLQTITLFGNQFDC 193 (251)
T ss_dssp CCEEECCSSCCSCCCTT------TTTTCTTCCEEECCSCCBCT
T ss_pred CCEEECCCCcCCccCHH------HHhCCCCCCEEEeeCCceeC
Confidence 99999999988755421 24455566666666666543
No 332
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.90 E-value=8.9e-24 Score=227.48 Aligned_cols=206 Identities=22% Similarity=0.183 Sum_probs=159.5
Q ss_pred ccccccCcccEEEccCCCCCccCCchhhcccccccEEEccCccccCCCCCCCCCCCcccEEEeecceecccCCCcccccC
Q 039533 263 CSLTNATRLTWMHINSNNFGGLLPGCISNLSKTIKTLFLNNNKIYGSIPAGIGNFVNLQRLDMWNNQLSGTIPPAIGELQ 342 (949)
Q Consensus 263 ~~l~~~~~L~~L~L~~N~l~~~~p~~~~~l~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~ 342 (949)
|.+.++++++.+++++|+++.. |..+ +++++.|+|++|+|++..+..|..+++|++|+|++|.|++..+. +.++
T Consensus 4 C~~~~l~~l~~l~~~~~~l~~i-p~~~---~~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~--~~l~ 77 (290)
T 1p9a_G 4 CEVSKVASHLEVNCDKRNLTAL-PPDL---PKDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVD--GTLP 77 (290)
T ss_dssp SEEECSTTCCEEECTTSCCSSC-CSCC---CTTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEECC--SCCT
T ss_pred ccccccCCccEEECCCCCCCcC-CCCC---CCCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccCC--CCCC
Confidence 4567778888999999988854 4433 35799999999999988888999999999999999999965443 7899
Q ss_pred CCCEEecCCcccccccCcccccccccceeecccccccccCCCCCCCCCCCcEEEeeCccccCCCCCcccCCcccceeecc
Q 039533 343 NLKILGLNRNKLSGNIPPSIGNLKMLLNLFLNDNFLEVSIPSSLGQCESLIEINLSNNNLSGTIPPQFFSLSSLSISLDW 422 (949)
Q Consensus 343 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~l~~~L~l 422 (949)
+|++|+|++|+|+ .+|..+.++++|++|+|++|++++..|..|.++++|++|+|++|++++..+
T Consensus 78 ~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~--------------- 141 (290)
T 1p9a_G 78 VLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPP--------------- 141 (290)
T ss_dssp TCCEEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCT---------------
T ss_pred cCCEEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccCh---------------
Confidence 9999999999998 677788888888888888888887777778888888888888877774333
Q ss_pred CCCccCCCCccccccccccceeeeccccccccCCcccccccchhhcccCccccccccCCCcCCCCCCCEEECCCCcCCC
Q 039533 423 SRNKLTGSLPIEVGKLKILEFLYVYENRLEGEIPSTFGNCIRLEQLGMGGNLFQGPISSSLGSLRGLRVLDLSQNNLSG 501 (949)
Q Consensus 423 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 501 (949)
..|..+++|+.|+|++|+|++..+..|..+++|+.|+|++|+|+ .+|..+..+.+|+.|+|++|.+..
T Consensus 142 ----------~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~l~L~~Np~~C 209 (290)
T 1p9a_G 142 ----------GLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWLC 209 (290)
T ss_dssp ----------TTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBCC
T ss_pred ----------hhcccccCCCEEECCCCcCCccCHHHhcCcCCCCEEECCCCcCC-ccChhhcccccCCeEEeCCCCccC
Confidence 33444555666666666666444455666777777777777777 566777777788888888888864
No 333
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.90 E-value=9e-25 Score=255.08 Aligned_cols=186 Identities=17% Similarity=0.130 Sum_probs=143.4
Q ss_pred CCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCCc--------chHHHHHHHHHHHhcCCCcceeEEeeeecccccCC
Q 039533 629 SSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHG--------ASRSFIAECKALKSIRHRNLVKVLTACLGADYRGN 700 (949)
Q Consensus 629 ~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~--------~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 700 (949)
...++||+|+||.||+|.. .++.+++|+....... ..+++.+|++++++++||||+++..++...+
T Consensus 339 ~~~~~LG~G~fg~Vy~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~---- 412 (540)
T 3en9_A 339 IPEHLIGKGAEADIKRDSY--LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLD---- 412 (540)
T ss_dssp ---------CCEEEEEEEC--SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETT----
T ss_pred CCCCEEeeCCCEEEEEEEE--CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCC----
Confidence 4567999999999999954 4788999987543221 1245899999999999999995554544332
Q ss_pred ccceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCce
Q 039533 701 DFKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTA 780 (949)
Q Consensus 701 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~ 780 (949)
..++||||+++++|.+++.. +..++.|+++||+|||++ +|+||||||+|||++. .+
T Consensus 413 -~~~lVmE~~~ggsL~~~l~~------------------~~~i~~qi~~aL~~LH~~---gIiHrDiKp~NILl~~--~~ 468 (540)
T 3en9_A 413 -NKRIMMSYINGKLAKDVIED------------------NLDIAYKIGEIVGKLHKN---DVIHNDLTTSNFIFDK--DL 468 (540)
T ss_dssp -TTEEEEECCCSEEHHHHSTT------------------CTHHHHHHHHHHHHHHHT---TEECTTCCTTSEEESS--SE
T ss_pred -ccEEEEECCCCCCHHHHHHH------------------HHHHHHHHHHHHHHHHHC---cCccCCCCHHHEEECC--eE
Confidence 56999999999999999971 457999999999999987 8999999999999999 99
Q ss_pred EEeecccceecCCCCCcc-----ccccccCccCccCccccCC--CccCCccchHHHHHHHHHHHhCCCCCc
Q 039533 781 RVGDFGLARILSPDHTQT-----SSFSVKGSLGYIAPEYGVG--CEVSTNGDVYSYGILLLELVIGKKPID 844 (949)
Q Consensus 781 kl~DfG~a~~~~~~~~~~-----~~~~~~gt~~y~aPE~~~~--~~~~~~sDiwSlGvvl~elltg~~Pf~ 844 (949)
||+|||+|+......... ......||+.|||||++.. ..|+..+|+||..+-..+-+.++.+|.
T Consensus 469 kL~DFGla~~~~~~~~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY~ 539 (540)
T 3en9_A 469 YIIDFGLGKISNLDEDKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARYV 539 (540)
T ss_dssp EECCCTTCEECCCHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCCC
T ss_pred EEEECccCEECCCccccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccccC
Confidence 999999999876543211 1124569999999999887 568888999999999998888877763
No 334
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.90 E-value=4.6e-26 Score=254.39 Aligned_cols=123 Identities=13% Similarity=0.103 Sum_probs=61.7
Q ss_pred cccEEEeecceecccCCCccc----cc-CCCCEEecCCcccccc----cCccccc-ccccceeecccccccccCC----C
Q 039533 319 NLQRLDMWNNQLSGTIPPAIG----EL-QNLKILGLNRNKLSGN----IPPSIGN-LKMLLNLFLNDNFLEVSIP----S 384 (949)
Q Consensus 319 ~L~~L~L~~N~l~~~~p~~~~----~l-~~L~~L~Ls~N~l~~~----~p~~~~~-l~~L~~L~L~~N~l~~~~p----~ 384 (949)
+|++|+|++|+|++..+..+. .+ ++|+.|+|++|+|++. ++..+.. .++|++|+|++|.+++..+ .
T Consensus 168 ~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~ 247 (362)
T 3goz_A 168 NVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFSSIPNHVVSLNLCLNCLHGPSLENLKL 247 (362)
T ss_dssp TCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHHSCTTCCEEECCSSCCCCCCHHHHHH
T ss_pred cccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHHHHhcCCCCceEEECcCCCCCcHHHHHHHH
Confidence 444555555554433332222 22 3555555555555531 2333333 2355555555555554322 3
Q ss_pred CCCCCCCCcEEEeeCccccCCCCCcccCCcccceeeccCCCccCCCCccccccccccceeeeccccccccCCccc
Q 039533 385 SLGQCESLIEINLSNNNLSGTIPPQFFSLSSLSISLDWSRNKLTGSLPIEVGKLKILEFLYVYENRLEGEIPSTF 459 (949)
Q Consensus 385 ~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~l~~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 459 (949)
.+..+++|++|+|++|.+.+..+..+. .++..+..+++|+.||+++|++....+..+
T Consensus 248 ~~~~l~~L~~L~L~~n~l~~i~~~~~~------------------~l~~~~~~l~~L~~LdL~~N~l~~~~~~~~ 304 (362)
T 3goz_A 248 LKDSLKHLQTVYLDYDIVKNMSKEQCK------------------ALGAAFPNIQKIILVDKNGKEIHPSHSIPI 304 (362)
T ss_dssp TTTTTTTCSEEEEEHHHHTTCCHHHHH------------------HHHTTSTTCCEEEEECTTSCBCCGGGCHHH
T ss_pred HHhcCCCccEEEeccCCccccCHHHHH------------------HHHHHhccCCceEEEecCCCcCCCcchHHH
Confidence 445667777888887776532221110 223345556667777777777665544433
No 335
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.90 E-value=1.4e-25 Score=250.51 Aligned_cols=261 Identities=18% Similarity=0.178 Sum_probs=156.6
Q ss_pred EEcCCCCCCccccCCCCCCCCCceeeccCceeccccC----CcccCcc-cCcEEeeccccccCcCCCCCCCC-----ccc
Q 039533 70 LDLRSLKLAGSVSHFIGNLSFLKQLYLQVNSFTHEIP----SEIGGLR-RLKVLALNNNSICGEIPTNISRC-----STL 139 (949)
Q Consensus 70 l~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~l~~~~p----~~~~~l~-~L~~L~Ls~N~l~~~~p~~~~~l-----~~L 139 (949)
.+|+.++++|.++..+...++|++|+|++|.+++..+ ..|.+++ +|++|+|++|.+++..+..+..+ ++|
T Consensus 3 ~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L 82 (362)
T 3goz_A 3 YKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANV 82 (362)
T ss_dssp EECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTC
T ss_pred cccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCc
Confidence 4566777777776666666667777777777765544 5566666 67777777777766555555543 666
Q ss_pred eeecCCCccccccccccccC----C-CCCcEEECCCCCCCCCCCCCc----CC-CCCccEEeccccccCCCCCCc----c
Q 039533 140 IPIHPQNNQLVGKILSRFSS----L-SKTEILNLGSNHLTGSIPSSL----GN-LSSIHTISLAYNNLDGTIPNS----F 205 (949)
Q Consensus 140 ~~L~l~~n~l~~~~~~~~~~----L-~~L~~L~Ls~N~l~~~~p~~~----~~-l~~L~~L~L~~N~l~~~~p~~----~ 205 (949)
++|++++|.+++..+..+.. + ++|++|+|++|.|++..+..+ .. .++|++|+|++|++++..+.. +
T Consensus 83 ~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l 162 (362)
T 3goz_A 83 TSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQIL 162 (362)
T ss_dssp CEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHHH
T ss_pred cEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHHH
Confidence 66666666666555543332 2 566666666666664443332 22 245666666666665433222 2
Q ss_pred cCCC-ccccccccCcccccccccccCCCCChhhhccccccccccCCCCCCCCCCcchhcccccc-CcccEEEccCCCCCc
Q 039533 206 GWFE-NLVFLSLAANNLSVVENKLTGEVPSLEKLQRLQHFTITSNSLGSGGNDDLSFLCSLTNA-TRLTWMHINSNNFGG 283 (949)
Q Consensus 206 ~~l~-~L~~L~Ls~N~l~~~~~~l~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~~-~~L~~L~L~~N~l~~ 283 (949)
..++ +|++|+|++|+|+... .. .+...+... ++|++|+|++|++++
T Consensus 163 ~~~~~~L~~L~Ls~n~l~~~~------------------------------~~--~l~~~l~~~~~~L~~L~Ls~N~i~~ 210 (362)
T 3goz_A 163 AAIPANVNSLNLRGNNLASKN------------------------------CA--ELAKFLASIPASVTSLDLSANLLGL 210 (362)
T ss_dssp HTSCTTCCEEECTTSCGGGSC------------------------------HH--HHHHHHHTSCTTCCEEECTTSCGGG
T ss_pred hcCCccccEeeecCCCCchhh------------------------------HH--HHHHHHHhCCCCCCEEECCCCCCCh
Confidence 3333 5555555555543221 11 011122333 467777777777775
Q ss_pred c----CCchhhcccccccEEEccCccccCCCC----CCCCCCCcccEEEeecceeccc-------CCCcccccCCCCEEe
Q 039533 284 L----LPGCISNLSKTIKTLFLNNNKIYGSIP----AGIGNFVNLQRLDMWNNQLSGT-------IPPAIGELQNLKILG 348 (949)
Q Consensus 284 ~----~p~~~~~l~~~L~~L~L~~N~l~~~~~----~~~~~l~~L~~L~L~~N~l~~~-------~p~~~~~l~~L~~L~ 348 (949)
. ++..+...+++|++|+|++|+|++..+ ..+..+++|++|+|++|.+.+. ++..+..+++|+.||
T Consensus 211 ~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~~~~l~~L~~L~L~~n~l~~i~~~~~~~l~~~~~~l~~L~~Ld 290 (362)
T 3goz_A 211 KSYAELAYIFSSIPNHVVSLNLCLNCLHGPSLENLKLLKDSLKHLQTVYLDYDIVKNMSKEQCKALGAAFPNIQKIILVD 290 (362)
T ss_dssp SCHHHHHHHHHHSCTTCCEEECCSSCCCCCCHHHHHHTTTTTTTCSEEEEEHHHHTTCCHHHHHHHHTTSTTCCEEEEEC
T ss_pred hHHHHHHHHHhcCCCCceEEECcCCCCCcHHHHHHHHHHhcCCCccEEEeccCCccccCHHHHHHHHHHhccCCceEEEe
Confidence 3 344455545578888888888876443 3456678888888888884432 344677788888888
Q ss_pred cCCcccccccCccc
Q 039533 349 LNRNKLSGNIPPSI 362 (949)
Q Consensus 349 Ls~N~l~~~~p~~~ 362 (949)
|++|++.+..+..+
T Consensus 291 L~~N~l~~~~~~~~ 304 (362)
T 3goz_A 291 KNGKEIHPSHSIPI 304 (362)
T ss_dssp TTSCBCCGGGCHHH
T ss_pred cCCCcCCCcchHHH
Confidence 88888876655444
No 336
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.90 E-value=2.3e-23 Score=219.75 Aligned_cols=180 Identities=21% Similarity=0.231 Sum_probs=125.2
Q ss_pred cccEEEccCccccCCCCCCCCCCCcccEEEeecceecccCCCcccccCCCCEEecCCcccccccCcccccccccceeecc
Q 039533 295 TIKTLFLNNNKIYGSIPAGIGNFVNLQRLDMWNNQLSGTIPPAIGELQNLKILGLNRNKLSGNIPPSIGNLKMLLNLFLN 374 (949)
Q Consensus 295 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 374 (949)
..++++++++.++ .+|..+. ++|+.|+|++|++++..+..|.++++|++|+|++|+|++..|..|.++++|++|+|+
T Consensus 15 ~~~~l~~~~~~l~-~~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 91 (251)
T 3m19_A 15 GKKEVDCQGKSLD-SVPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLA 91 (251)
T ss_dssp GGTEEECTTCCCS-SCCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECT
T ss_pred CCeEEecCCCCcc-ccCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECC
Confidence 4667777777777 4555444 467777777777776666677777777777777777776666666666666666666
Q ss_pred cccccccCCCCCCCCCCCcEEEeeCccccCCCCCcccCCcccceeeccCCCccCCCCccccccccccceeeecccccccc
Q 039533 375 DNFLEVSIPSSLGQCESLIEINLSNNNLSGTIPPQFFSLSSLSISLDWSRNKLTGSLPIEVGKLKILEFLYVYENRLEGE 454 (949)
Q Consensus 375 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~l~~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 454 (949)
+|++++..+..|..+++|++|+|++|+|+ +..+..+..+++|++|+|++|+|++.
T Consensus 92 ~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-------------------------~~~~~~~~~l~~L~~L~Ls~N~l~~~ 146 (251)
T 3m19_A 92 NNQLASLPLGVFDHLTQLDKLYLGGNQLK-------------------------SLPSGVFDRLTKLKELRLNTNQLQSI 146 (251)
T ss_dssp TSCCCCCCTTTTTTCTTCCEEECCSSCCC-------------------------CCCTTTTTTCTTCCEEECCSSCCCCC
T ss_pred CCcccccChhHhcccCCCCEEEcCCCcCC-------------------------CcChhHhccCCcccEEECcCCcCCcc
Confidence 66666555566666666666666666655 23333455566677777777777765
Q ss_pred CCcccccccchhhcccCccccccccCCCcCCCCCCCEEECCCCcCCCc
Q 039533 455 IPSTFGNCIRLEQLGMGGNLFQGPISSSLGSLRGLRVLDLSQNNLSGE 502 (949)
Q Consensus 455 ~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 502 (949)
.+..|+.+++|+.|+|++|+|++..+..|..+++|+.|+|++|++++.
T Consensus 147 ~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 194 (251)
T 3m19_A 147 PAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDCS 194 (251)
T ss_dssp CTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCTT
T ss_pred CHHHcCcCcCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCceeCC
Confidence 555677777777777777777777777788888888888888888765
No 337
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.89 E-value=3.4e-23 Score=216.73 Aligned_cols=197 Identities=18% Similarity=0.166 Sum_probs=112.5
Q ss_pred ccccEEEccCccccCCCCCCCCCCCcccEEEeecce-ecccCCCcccccCCCCEEecCC-cccccccCccccccccccee
Q 039533 294 KTIKTLFLNNNKIYGSIPAGIGNFVNLQRLDMWNNQ-LSGTIPPAIGELQNLKILGLNR-NKLSGNIPPSIGNLKMLLNL 371 (949)
Q Consensus 294 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~-l~~~~p~~~~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L 371 (949)
.+|++|++++|+|++..+..|..+++|++|+|++|. +++..+..|.++++|++|+|++ |++++..+..|.++++|++|
T Consensus 31 ~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L 110 (239)
T 2xwt_C 31 PSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFL 110 (239)
T ss_dssp TTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEE
T ss_pred CcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEE
Confidence 356666666666665555566666666666666665 6555555666666666666666 66665555556666666666
Q ss_pred ecccccccccCCCCCCCCCCCc---EEEeeCc-cccCCCCCcccCCcccceeeccCCCccCCCCccccccccccc-eeee
Q 039533 372 FLNDNFLEVSIPSSLGQCESLI---EINLSNN-NLSGTIPPQFFSLSSLSISLDWSRNKLTGSLPIEVGKLKILE-FLYV 446 (949)
Q Consensus 372 ~L~~N~l~~~~p~~~~~l~~L~---~L~l~~N-~l~~~~p~~~~~l~~l~~~L~ls~N~l~~~~p~~~~~l~~L~-~L~L 446 (949)
++++|.+++ +|. |..+++|+ +|++++| +++ +..+..|..+++|+ .|++
T Consensus 111 ~l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~-------------------------~i~~~~~~~l~~L~~~L~l 163 (239)
T 2xwt_C 111 GIFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMT-------------------------SIPVNAFQGLCNETLTLKL 163 (239)
T ss_dssp EEEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCC-------------------------EECTTTTTTTBSSEEEEEC
T ss_pred eCCCCCCcc-ccc-cccccccccccEEECCCCcchh-------------------------hcCcccccchhcceeEEEc
Confidence 666666654 444 55555555 5555555 444 33344455555556 6666
Q ss_pred ccccccccCCcccccccchhhcccCccc-cccccCCCcCCC-CCCCEEECCCCcCCCcCcccccCCccceEeCCCC
Q 039533 447 YENRLEGEIPSTFGNCIRLEQLGMGGNL-FQGPISSSLGSL-RGLRVLDLSQNNLSGEIPKFLAGLSLNNLNLSYN 520 (949)
Q Consensus 447 s~N~l~~~~p~~~~~l~~L~~L~l~~N~-l~~~~~~~~~~l-~~L~~L~Ls~N~l~~~~p~~~~~~~L~~l~ls~N 520 (949)
++|+++ .+|......++|+.|+|++|+ +++..+..|..+ ++|+.|+|++|+|++..+..+ ..|+.|+++++
T Consensus 164 ~~n~l~-~i~~~~~~~~~L~~L~L~~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~l~~~~~--~~L~~L~l~~~ 236 (239)
T 2xwt_C 164 YNNGFT-SVQGYAFNGTKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVTALPSKGL--EHLKELIARNT 236 (239)
T ss_dssp CSCCCC-EECTTTTTTCEEEEEECTTCTTCCEECTTTTTTCSBCCSEEECTTCCCCCCCCTTC--TTCSEEECTTC
T ss_pred CCCCCc-ccCHhhcCCCCCCEEEcCCCCCcccCCHHHhhccccCCcEEECCCCccccCChhHh--ccCceeeccCc
Confidence 666665 333322222566666666663 665555566666 666666666666664333311 13666666654
No 338
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.89 E-value=1.3e-25 Score=248.35 Aligned_cols=164 Identities=16% Similarity=0.220 Sum_probs=102.3
Q ss_pred CCcceeeeeEEeCCCCcEEEEEcCCCCCCccccCCCCCC--CCCceeeccCceeccccCCcccCcccCcEEeeccccccC
Q 039533 50 IHFCKWYGVTCSRRHQRVTLLDLRSLKLAGSVSHFIGNL--SFLKQLYLQVNSFTHEIPSEIGGLRRLKVLALNNNSICG 127 (949)
Q Consensus 50 ~~~C~w~gv~C~~~~~~v~~l~l~~~~l~g~~~~~l~~l--~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 127 (949)
.-|.+|.++.|+.. .++.+|++++.+. +..+..+ ++++.|++++|.+.+..+. +.++++|++|+|++|.+++
T Consensus 34 ~vc~~W~~~~~~~~--~~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~ 107 (336)
T 2ast_B 34 GVCKRWYRLASDES--LWQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEV 107 (336)
T ss_dssp SSCHHHHHHHTCST--TSSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECH
T ss_pred HHHHHHHHHhcCch--hheeeccccccCC---HHHHHhhhhccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCH
Confidence 34668999988643 4677888887766 2345555 6777778887777766554 4567777777777777765
Q ss_pred c-CCCCCCCCccceeecCCCccccccccccccCCCCCcEEECCCC-CCCCC-CCCCcCCCCCccEEecccc-ccCCC-CC
Q 039533 128 E-IPTNISRCSTLIPIHPQNNQLVGKILSRFSSLSKTEILNLGSN-HLTGS-IPSSLGNLSSIHTISLAYN-NLDGT-IP 202 (949)
Q Consensus 128 ~-~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~L~~L~~L~Ls~N-~l~~~-~p~~~~~l~~L~~L~L~~N-~l~~~-~p 202 (949)
. +|..+.++++|++|++++|.+++..+..|+.+++|++|+|++| .+++. ++..+.++++|++|+|++| ++++. ++
T Consensus 108 ~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~ 187 (336)
T 2ast_B 108 STLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQ 187 (336)
T ss_dssp HHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHH
T ss_pred HHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHH
Confidence 4 6666666666666666666666666666666666666666666 45532 3444555556666666666 55432 33
Q ss_pred CcccCCC-ccccccccCc
Q 039533 203 NSFGWFE-NLVFLSLAAN 219 (949)
Q Consensus 203 ~~~~~l~-~L~~L~Ls~N 219 (949)
..+..++ +|++|+|++|
T Consensus 188 ~~~~~l~~~L~~L~l~~~ 205 (336)
T 2ast_B 188 VAVAHVSETITQLNLSGY 205 (336)
T ss_dssp HHHHHSCTTCCEEECCSC
T ss_pred HHHHhcccCCCEEEeCCC
Confidence 3344444 4444444444
No 339
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.89 E-value=5.2e-23 Score=215.34 Aligned_cols=208 Identities=17% Similarity=0.162 Sum_probs=167.9
Q ss_pred ccCCCCCCCCCCCcccEEEeecceecccCCCcccccCCCCEEecCCcc-cccccCcccccccccceeeccc-ccccccCC
Q 039533 306 IYGSIPAGIGNFVNLQRLDMWNNQLSGTIPPAIGELQNLKILGLNRNK-LSGNIPPSIGNLKMLLNLFLND-NFLEVSIP 383 (949)
Q Consensus 306 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~l~~L~~L~L~~-N~l~~~~p 383 (949)
++ .+|. +. ++|++|+|++|++++..+..|.++++|++|+|++|+ +++..+..|.++++|++|++++ |.+++..+
T Consensus 23 l~-~ip~-~~--~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~ 98 (239)
T 2xwt_C 23 IQ-RIPS-LP--PSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDP 98 (239)
T ss_dssp CS-SCCC-CC--TTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECT
T ss_pred cc-ccCC-CC--CcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCH
Confidence 44 4565 43 489999999999998777789999999999999997 8877777899999999999998 99987777
Q ss_pred CCCCCCCCCcEEEeeCccccCCCCCcccCCcccceeeccCCCccCCCCccccccccccceeeeccc-cccccCCcccccc
Q 039533 384 SSLGQCESLIEINLSNNNLSGTIPPQFFSLSSLSISLDWSRNKLTGSLPIEVGKLKILEFLYVYEN-RLEGEIPSTFGNC 462 (949)
Q Consensus 384 ~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~l~~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N-~l~~~~p~~~~~l 462 (949)
..|.++++|++|++++|++++ +|. +..+.++ +.|++|++++| ++++..+..|.++
T Consensus 99 ~~f~~l~~L~~L~l~~n~l~~-lp~-~~~l~~L----------------------~~L~~L~l~~N~~l~~i~~~~~~~l 154 (239)
T 2xwt_C 99 DALKELPLLKFLGIFNTGLKM-FPD-LTKVYST----------------------DIFFILEITDNPYMTSIPVNAFQGL 154 (239)
T ss_dssp TSEECCTTCCEEEEEEECCCS-CCC-CTTCCBC----------------------CSEEEEEEESCTTCCEECTTTTTTT
T ss_pred HHhCCCCCCCEEeCCCCCCcc-ccc-ccccccc----------------------ccccEEECCCCcchhhcCcccccch
Confidence 888899999999999998874 553 3332222 22459999999 9998777889999
Q ss_pred cchh-hcccCccccccccCCCcCCCCCCCEEECCCCc-CCCcCcccccCC-c-cceEeCCCCcCcCcccccccccccccc
Q 039533 463 IRLE-QLGMGGNLFQGPISSSLGSLRGLRVLDLSQNN-LSGEIPKFLAGL-S-LNNLNLSYNDLEGMVTTEGVFKNASAT 538 (949)
Q Consensus 463 ~~L~-~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~~-~-L~~l~ls~N~l~~~~~~~~~~~~~~~~ 538 (949)
++|+ .|++++|+++...+..|.. ++|+.|+|++|+ +++..+..+..+ + |+.|++++|++++.++. .|..+..+
T Consensus 155 ~~L~~~L~l~~n~l~~i~~~~~~~-~~L~~L~L~~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~l~~~--~~~~L~~L 231 (239)
T 2xwt_C 155 CNETLTLKLYNNGFTSVQGYAFNG-TKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVTALPSK--GLEHLKEL 231 (239)
T ss_dssp BSSEEEEECCSCCCCEECTTTTTT-CEEEEEECTTCTTCCEECTTTTTTCSBCCSEEECTTCCCCCCCCT--TCTTCSEE
T ss_pred hcceeEEEcCCCCCcccCHhhcCC-CCCCEEEcCCCCCcccCCHHHhhccccCCcEEECCCCccccCChh--HhccCcee
Confidence 9999 9999999999444444555 899999999995 997778888887 5 99999999999987554 57777777
Q ss_pred cccCCC
Q 039533 539 RILGNS 544 (949)
Q Consensus 539 ~~~gn~ 544 (949)
.+.++.
T Consensus 232 ~l~~~~ 237 (239)
T 2xwt_C 232 IARNTW 237 (239)
T ss_dssp ECTTC-
T ss_pred eccCcc
Confidence 666553
No 340
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.89 E-value=8.5e-24 Score=230.63 Aligned_cols=199 Identities=20% Similarity=0.179 Sum_probs=112.0
Q ss_pred cccEEEeecceecccCCCcc--cccCCCCEEecCCcccccccC----cccccccccceeecccccccccCCCCCCCCCCC
Q 039533 319 NLQRLDMWNNQLSGTIPPAI--GELQNLKILGLNRNKLSGNIP----PSIGNLKMLLNLFLNDNFLEVSIPSSLGQCESL 392 (949)
Q Consensus 319 ~L~~L~L~~N~l~~~~p~~~--~~l~~L~~L~Ls~N~l~~~~p----~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L 392 (949)
+|++|+|++|.+++..|..+ ..+++|++|+|++|++++..+ ..+..+++|++|+|++|.+++..|..|..+++|
T Consensus 92 ~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L 171 (310)
T 4glp_A 92 RLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFPAL 171 (310)
T ss_dssp CCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCTTC
T ss_pred ceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccCCCC
Confidence 34444444444444444444 444444444444444443322 222344555555555555554445555555555
Q ss_pred cEEEeeCccccCC--C--CCcccCCcccceeeccCCCccCCCCcc----ccccccccceeeeccccccccCCcccccc--
Q 039533 393 IEINLSNNNLSGT--I--PPQFFSLSSLSISLDWSRNKLTGSLPI----EVGKLKILEFLYVYENRLEGEIPSTFGNC-- 462 (949)
Q Consensus 393 ~~L~l~~N~l~~~--~--p~~~~~l~~l~~~L~ls~N~l~~~~p~----~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l-- 462 (949)
++|+|++|++.+. + +..+..+++| ++|+|++|+++ .++. .++.+++|++|+|++|++++..|..+..+
T Consensus 172 ~~L~Ls~N~l~~~~~~~~~~~~~~l~~L-~~L~Ls~N~l~-~l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~ 249 (310)
T 4glp_A 172 TSLDLSDNPGLGERGLMAALCPHKFPAI-QNLALRNTGME-TPTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPRCMW 249 (310)
T ss_dssp CEEECCSCTTCHHHHHHTTSCTTSSCCC-CSCBCCSSCCC-CHHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCSSCCC
T ss_pred CEEECCCCCCccchhhhHHHhhhcCCCC-CEEECCCCCCC-chHHHHHHHHhcCCCCCEEECCCCCCCccchhhHHhccC
Confidence 5555555554421 1 1122344555 45666666665 2222 24566777777777777777667666666
Q ss_pred -cchhhcccCccccccccCCCcCCCCCCCEEECCCCcCCCcCcccccCCc-cceEeCCCCcCcC
Q 039533 463 -IRLEQLGMGGNLFQGPISSSLGSLRGLRVLDLSQNNLSGEIPKFLAGLS-LNNLNLSYNDLEG 524 (949)
Q Consensus 463 -~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~-L~~l~ls~N~l~~ 524 (949)
++|+.|+|++|+|+ .+|..+. ++|+.|||++|+|++. |. +..++ |+.|+|++|+++.
T Consensus 250 ~~~L~~L~Ls~N~l~-~lp~~~~--~~L~~L~Ls~N~l~~~-~~-~~~l~~L~~L~L~~N~l~~ 308 (310)
T 4glp_A 250 SSALNSLNLSFAGLE-QVPKGLP--AKLRVLDLSSNRLNRA-PQ-PDELPEVDNLTLDGNPFLV 308 (310)
T ss_dssp CTTCCCEECCSSCCC-SCCSCCC--SCCSCEECCSCCCCSC-CC-TTSCCCCSCEECSSTTTSC
T ss_pred cCcCCEEECCCCCCC-chhhhhc--CCCCEEECCCCcCCCC-ch-hhhCCCccEEECcCCCCCC
Confidence 57777777777777 5566654 6778888888888753 32 23333 7788888887764
No 341
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.89 E-value=2.6e-23 Score=226.80 Aligned_cols=201 Identities=19% Similarity=0.159 Sum_probs=173.7
Q ss_pred ccccEEEccCccccCCCCCCC--CCCCcccEEEeecceecccCC----CcccccCCCCEEecCCcccccccCcccccccc
Q 039533 294 KTIKTLFLNNNKIYGSIPAGI--GNFVNLQRLDMWNNQLSGTIP----PAIGELQNLKILGLNRNKLSGNIPPSIGNLKM 367 (949)
Q Consensus 294 ~~L~~L~L~~N~l~~~~~~~~--~~l~~L~~L~L~~N~l~~~~p----~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 367 (949)
++|++|++++|++++..|..+ ..+++|++|+|++|.+++..+ ..+..+++|++|+|++|++++..|..|+++++
T Consensus 91 ~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~ 170 (310)
T 4glp_A 91 SRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFPA 170 (310)
T ss_dssp SCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCTT
T ss_pred CceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccCCC
Confidence 359999999999999999988 899999999999999997655 34557899999999999999888899999999
Q ss_pred cceeeccccccccc--C--CCCCCCCCCCcEEEeeCccccCCCCCc----ccCCcccceeeccCCCccCCCCccccccc-
Q 039533 368 LLNLFLNDNFLEVS--I--PSSLGQCESLIEINLSNNNLSGTIPPQ----FFSLSSLSISLDWSRNKLTGSLPIEVGKL- 438 (949)
Q Consensus 368 L~~L~L~~N~l~~~--~--p~~~~~l~~L~~L~l~~N~l~~~~p~~----~~~l~~l~~~L~ls~N~l~~~~p~~~~~l- 438 (949)
|++|+|++|++.+. + +..+..+++|++|+|++|+++ .+|.. +..+++| +.|+|++|++++..|..+..+
T Consensus 171 L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~~l~~L-~~L~Ls~N~l~~~~p~~~~~~~ 248 (310)
T 4glp_A 171 LTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGME-TPTGVCAALAAAGVQP-HSLDLSHNSLRATVNPSAPRCM 248 (310)
T ss_dssp CCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCC-CHHHHHHHHHHHTCCC-SSEECTTSCCCCCCCSCCSSCC
T ss_pred CCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCC-chHHHHHHHHhcCCCC-CEEECCCCCCCccchhhHHhcc
Confidence 99999999998652 2 344578999999999999997 44442 4567888 789999999998888888777
Q ss_pred --cccceeeeccccccccCCcccccccchhhcccCccccccccCCCcCCCCCCCEEECCCCcCCC
Q 039533 439 --KILEFLYVYENRLEGEIPSTFGNCIRLEQLGMGGNLFQGPISSSLGSLRGLRVLDLSQNNLSG 501 (949)
Q Consensus 439 --~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 501 (949)
++|++|+|++|+|+ .+|..+. ++|+.|+|++|+|++. |. +..+++|+.|+|++|+|+.
T Consensus 249 ~~~~L~~L~Ls~N~l~-~lp~~~~--~~L~~L~Ls~N~l~~~-~~-~~~l~~L~~L~L~~N~l~~ 308 (310)
T 4glp_A 249 WSSALNSLNLSFAGLE-QVPKGLP--AKLRVLDLSSNRLNRA-PQ-PDELPEVDNLTLDGNPFLV 308 (310)
T ss_dssp CCTTCCCEECCSSCCC-SCCSCCC--SCCSCEECCSCCCCSC-CC-TTSCCCCSCEECSSTTTSC
T ss_pred CcCcCCEEECCCCCCC-chhhhhc--CCCCEEECCCCcCCCC-ch-hhhCCCccEEECcCCCCCC
Confidence 69999999999999 7788775 7999999999999965 43 7889999999999999974
No 342
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.88 E-value=1.8e-23 Score=243.71 Aligned_cols=136 Identities=21% Similarity=0.266 Sum_probs=87.4
Q ss_pred CccCccCCCCcc-----eeeee-EEeCCCCcEEEEEcCCCCCCccccCCCCCCCCCceeeccCceeccccCCcccCcccC
Q 039533 42 VLGTWNESIHFC-----KWYGV-TCSRRHQRVTLLDLRSLKLAGSVSHFIGNLSFLKQLYLQVNSFTHEIPSEIGGLRRL 115 (949)
Q Consensus 42 ~l~sW~~~~~~C-----~w~gv-~C~~~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L 115 (949)
.+.+|..+.++| .|.|+ .|.. .+++.|+|+++++++ +|..++ ++|++|+|++|+|+ .+| +.+++|
T Consensus 32 ~l~~W~~~~~~~~~~~~~~~~l~~C~~--~~L~~L~Ls~n~L~~-lp~~l~--~~L~~L~Ls~N~l~-~ip---~~l~~L 102 (571)
T 3cvr_A 32 AWDKWEKQALPGENRNEAVSLLKECLI--NQFSELQLNRLNLSS-LPDNLP--PQITVLEITQNALI-SLP---ELPASL 102 (571)
T ss_dssp HHHHHHTTCCTTCCHHHHHHHHHHHHH--TTCSEEECCSSCCSC-CCSCCC--TTCSEEECCSSCCS-CCC---CCCTTC
T ss_pred HHHHHhccCCccccccchhhhcccccc--CCccEEEeCCCCCCc-cCHhHc--CCCCEEECcCCCCc-ccc---cccCCC
Confidence 356787777778 79999 7864 368889999998887 776663 78888888888888 677 457888
Q ss_pred cEEeeccccccCcCCCCCCCCccceeecCCCccccccccccccCCCCCcEEECCCCCCCCCCCCCcCCCCCccEEecccc
Q 039533 116 KVLALNNNSICGEIPTNISRCSTLIPIHPQNNQLVGKILSRFSSLSKTEILNLGSNHLTGSIPSSLGNLSSIHTISLAYN 195 (949)
Q Consensus 116 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N 195 (949)
++|+|++|+|++ +|. +.+ +|++|++++|+|++... .+++|++|+|++|.|++ +|. .+++|++|+|++|
T Consensus 103 ~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls~N~l~~lp~----~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N 170 (571)
T 3cvr_A 103 EYLDACDNRLST-LPE-LPA--SLKHLDVDNNQLTMLPE----LPALLEYINADNNQLTM-LPE---LPTSLEVLSVRNN 170 (571)
T ss_dssp CEEECCSSCCSC-CCC-CCT--TCCEEECCSSCCSCCCC----CCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSS
T ss_pred CEEEccCCCCCC-cch-hhc--CCCEEECCCCcCCCCCC----cCccccEEeCCCCccCc-CCC---cCCCcCEEECCCC
Confidence 888888888885 676 544 55555555555544222 34444444444444443 332 2344444444444
Q ss_pred ccC
Q 039533 196 NLD 198 (949)
Q Consensus 196 ~l~ 198 (949)
+|+
T Consensus 171 ~L~ 173 (571)
T 3cvr_A 171 QLT 173 (571)
T ss_dssp CCS
T ss_pred CCC
Confidence 444
No 343
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.88 E-value=1.1e-22 Score=225.81 Aligned_cols=222 Identities=21% Similarity=0.216 Sum_probs=124.8
Q ss_pred ceeecCCCccccccccccccCCCCCcEEECCCCCCCCCCC-CCcCCCCCccE-EeccccccCCCCCCcccCCCccccccc
Q 039533 139 LIPIHPQNNQLVGKILSRFSSLSKTEILNLGSNHLTGSIP-SSLGNLSSIHT-ISLAYNNLDGTIPNSFGWFENLVFLSL 216 (949)
Q Consensus 139 L~~L~l~~n~l~~~~~~~~~~L~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~-L~L~~N~l~~~~p~~~~~l~~L~~L~L 216 (949)
+++|+|++|+|+.+.+.+|.+|++|++|+|++|++.+.+| ..|.++++|++ +.+++|+|++..|..|..+++|++|++
T Consensus 32 l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~~N~l~~l~~~~f~~l~~L~~L~l 111 (350)
T 4ay9_X 32 AIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLLI 111 (350)
T ss_dssp CSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEEETTCCEECTTSBCCCTTCCEEEE
T ss_pred CCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcccCCcccccCchhhhhccccccccc
Confidence 3444444444443334444444555555555555443333 23445544433 334445555444555555555555555
Q ss_pred cCcccccccccccCCCCChhhhccccccccccCCCCCCCCCCcchhccccccCcccEEEccC-CCCCccCCchhhccccc
Q 039533 217 AANNLSVVENKLTGEVPSLEKLQRLQHFTITSNSLGSGGNDDLSFLCSLTNATRLTWMHINS-NNFGGLLPGCISNLSKT 295 (949)
Q Consensus 217 s~N~l~~~~~~l~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~~~~L~~L~L~~-N~l~~~~p~~~~~l~~~ 295 (949)
++|+|+.++.. .+....++..+++.+ |++....+..+..+...
T Consensus 112 ~~n~l~~~~~~------------------------------------~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~ 155 (350)
T 4ay9_X 112 SNTGIKHLPDV------------------------------------HKIHSLQKVLLDIQDNINIHTIERNSFVGLSFE 155 (350)
T ss_dssp EEECCSSCCCC------------------------------------TTCCBSSCEEEEEESCTTCCEECTTSSTTSBSS
T ss_pred cccccccCCch------------------------------------hhcccchhhhhhhccccccccccccchhhcchh
Confidence 55554432211 011112233444433 33444444455555556
Q ss_pred ccEEEccCccccCCCCCCCCCCCcccEEEeec-ceecccCCCcccccCCCCEEecCCcccccccCcccccccccceeecc
Q 039533 296 IKTLFLNNNKIYGSIPAGIGNFVNLQRLDMWN-NQLSGTIPPAIGELQNLKILGLNRNKLSGNIPPSIGNLKMLLNLFLN 374 (949)
Q Consensus 296 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~-N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 374 (949)
++.|+|++|+|+. +|......++|++|++++ |.++...++.|.++++|+.|||++|+|+...+..|.++++|+.+++.
T Consensus 156 l~~L~L~~N~i~~-i~~~~f~~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~~lp~~~~~~L~~L~~l~~~ 234 (350)
T 4ay9_X 156 SVILWLNKNGIQE-IHNSAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYGLENLKKLRARSTY 234 (350)
T ss_dssp CEEEECCSSCCCE-ECTTSSTTEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCCCCCSSSCTTCCEEECTTCT
T ss_pred hhhhccccccccC-CChhhccccchhHHhhccCCcccCCCHHHhccCcccchhhcCCCCcCccChhhhccchHhhhccCC
Confidence 7888888888884 455555567888888874 66765445678888899999999999885555556666666555442
Q ss_pred cccccccCCCCCCCCCCCcEEEeeCcc
Q 039533 375 DNFLEVSIPSSLGQCESLIEINLSNNN 401 (949)
Q Consensus 375 ~N~l~~~~p~~~~~l~~L~~L~l~~N~ 401 (949)
.++ .+| .+..+++|+.++++++.
T Consensus 235 --~l~-~lP-~l~~l~~L~~l~l~~~~ 257 (350)
T 4ay9_X 235 --NLK-KLP-TLEKLVALMEASLTYPS 257 (350)
T ss_dssp --TCC-CCC-CTTTCCSCCEEECSCHH
T ss_pred --CcC-cCC-CchhCcChhhCcCCCCc
Confidence 233 556 37778888888887654
No 344
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.88 E-value=7.1e-25 Score=247.23 Aligned_cols=255 Identities=22% Similarity=0.269 Sum_probs=125.7
Q ss_pred ccCCcccCcccCcEEeeccccccCcCCCCCCCCccceeecCCCccccccccccccCCCCCcEEECCCC---CCCCCCCCC
Q 039533 104 EIPSEIGGLRRLKVLALNNNSICGEIPTNISRCSTLIPIHPQNNQLVGKILSRFSSLSKTEILNLGSN---HLTGSIPSS 180 (949)
Q Consensus 104 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~L~~L~~L~Ls~N---~l~~~~p~~ 180 (949)
.++..+..+++|++|+|++|.+++..+.. +...|..+++|++|+|++| ++++.+|..
T Consensus 23 ~l~~~l~~~~~L~~L~L~~n~i~~~~~~~--------------------l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~ 82 (386)
T 2ca6_A 23 SVFAVLLEDDSVKEIVLSGNTIGTEAARW--------------------LSENIASKKDLEIAEFSDIFTGRVKDEIPEA 82 (386)
T ss_dssp TTSHHHHHCSCCCEEECTTSEECHHHHHH--------------------HHHTTTTCTTCCEEECCSCCTTSCGGGSHHH
T ss_pred HHHHHHhcCCCccEEECCCCCCCHHHHHH--------------------HHHHHHhCCCccEEeCcccccCccccchhHH
Confidence 45566667777777777777776542221 1122334444455555553 223333333
Q ss_pred c-------CCCCCccEEeccccccCC----CCCCcccCCCccccccccCcccccccccccCCCCC-hhhhcccccccccc
Q 039533 181 L-------GNLSSIHTISLAYNNLDG----TIPNSFGWFENLVFLSLAANNLSVVENKLTGEVPS-LEKLQRLQHFTITS 248 (949)
Q Consensus 181 ~-------~~l~~L~~L~L~~N~l~~----~~p~~~~~l~~L~~L~Ls~N~l~~~~~~l~~~~~~-l~~l~~L~~L~l~~ 248 (949)
+ ..+++|++|+|++|++++ .+|..+..+++|++|+|++|.++...... ++. +..+ . .
T Consensus 83 ~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~---l~~~l~~l---~-----~ 151 (386)
T 2ca6_A 83 LRLLLQALLKCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAK---IARALQEL---A-----V 151 (386)
T ss_dssp HHHHHHHHTTCTTCCEEECCSCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHH---HHHHHHHH---H-----H
T ss_pred HHHHHHHHhhCCcccEEECCCCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHH---HHHHHHHH---h-----h
Confidence 3 455566666666666554 24445555566666666665554221000 000 1111 0 0
Q ss_pred CCCCCCCCCCcchhccccccCcccEEEccCCCCC-ccCC---chhhcccccccEEEccCcccc--C---CCCCCCCCCCc
Q 039533 249 NSLGSGGNDDLSFLCSLTNATRLTWMHINSNNFG-GLLP---GCISNLSKTIKTLFLNNNKIY--G---SIPAGIGNFVN 319 (949)
Q Consensus 249 N~l~~~~~~~~~~~~~l~~~~~L~~L~L~~N~l~-~~~p---~~~~~l~~~L~~L~L~~N~l~--~---~~~~~~~~l~~ 319 (949)
|++. ...++|++|++++|+++ +.+| ..+..+ ++|++|+|++|+|+ | ..+..+..+++
T Consensus 152 ~~~~-------------~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~-~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~ 217 (386)
T 2ca6_A 152 NKKA-------------KNAPPLRSIICGRNRLENGSMKEWAKTFQSH-RLLHTVKMVQNGIRPEGIEHLLLEGLAYCQE 217 (386)
T ss_dssp HHHH-------------HTCCCCCEEECCSSCCTGGGHHHHHHHHHHC-TTCCEEECCSSCCCHHHHHHHHHTTGGGCTT
T ss_pred hhhc-------------ccCCCCcEEECCCCCCCcHHHHHHHHHHHhC-CCcCEEECcCCCCCHhHHHHHHHHHhhcCCC
Confidence 0000 00034555555555554 2222 123333 24666666666655 2 23335566666
Q ss_pred ccEEEeecceec----ccCCCcccccCCCCEEecCCcccccc----cCccc--ccccccceeecccccccc----cCCCC
Q 039533 320 LQRLDMWNNQLS----GTIPPAIGELQNLKILGLNRNKLSGN----IPPSI--GNLKMLLNLFLNDNFLEV----SIPSS 385 (949)
Q Consensus 320 L~~L~L~~N~l~----~~~p~~~~~l~~L~~L~Ls~N~l~~~----~p~~~--~~l~~L~~L~L~~N~l~~----~~p~~ 385 (949)
|++|+|++|.|+ +.+|..+..+++|+.|+|++|+|++. +|..+ +.+++|+.|+|++|.+++ .+|..
T Consensus 218 L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~ 297 (386)
T 2ca6_A 218 LKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTV 297 (386)
T ss_dssp CCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHH
T ss_pred ccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHH
Confidence 666666666664 44555666666666666666666544 34444 225555555555555554 24444
Q ss_pred C-CCCCCCcEEEeeCcccc
Q 039533 386 L-GQCESLIEINLSNNNLS 403 (949)
Q Consensus 386 ~-~~l~~L~~L~l~~N~l~ 403 (949)
+ .++++|++|++++|+++
T Consensus 298 l~~~l~~L~~L~l~~N~l~ 316 (386)
T 2ca6_A 298 IDEKMPDLLFLELNGNRFS 316 (386)
T ss_dssp HHHHCTTCCEEECTTSBSC
T ss_pred HHhcCCCceEEEccCCcCC
Confidence 4 33455555555555555
No 345
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.87 E-value=6.7e-24 Score=234.60 Aligned_cols=250 Identities=17% Similarity=0.200 Sum_probs=204.8
Q ss_pred cccEEEccCCCCCccCCchhhcc-cccccEEEccCccccCCCCCCCCCCCcccEEEeecceeccc-CCCcccccCCCCEE
Q 039533 270 RLTWMHINSNNFGGLLPGCISNL-SKTIKTLFLNNNKIYGSIPAGIGNFVNLQRLDMWNNQLSGT-IPPAIGELQNLKIL 347 (949)
Q Consensus 270 ~L~~L~L~~N~l~~~~p~~~~~l-~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~-~p~~~~~l~~L~~L 347 (949)
.++.+++++|.+. +..+..+ ...++.|++++|.+.+..+. +..+++|++|+|++|.+++. +|..+..+++|++|
T Consensus 48 ~~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L 123 (336)
T 2ast_B 48 LWQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNL 123 (336)
T ss_dssp TSSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEE
T ss_pred hheeeccccccCC---HHHHHhhhhccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEE
Confidence 4678888888876 3444443 24699999999999977665 66789999999999999866 78888999999999
Q ss_pred ecCCcccccccCcccccccccceeecccc-ccccc-CCCCCCCCCCCcEEEeeCc-cccCC-CCCcccCCc-ccceeecc
Q 039533 348 GLNRNKLSGNIPPSIGNLKMLLNLFLNDN-FLEVS-IPSSLGQCESLIEINLSNN-NLSGT-IPPQFFSLS-SLSISLDW 422 (949)
Q Consensus 348 ~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N-~l~~~-~p~~~~~l~~L~~L~l~~N-~l~~~-~p~~~~~l~-~l~~~L~l 422 (949)
+|++|++++..|..++.+++|++|++++| .+++. ++..+.++++|++|++++| .+++. ++..+..++ +| +.|++
T Consensus 124 ~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L-~~L~l 202 (336)
T 2ast_B 124 SLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETI-TQLNL 202 (336)
T ss_dssp ECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTC-CEEEC
T ss_pred eCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHHHhcccCC-CEEEe
Confidence 99999999888889999999999999999 67753 6667888999999999999 88854 577778888 88 78999
Q ss_pred CCC--ccC-CCCccccccccccceeeecccc-ccccCCcccccccchhhcccCccc-cccccCCCcCCCCCCCEEECCCC
Q 039533 423 SRN--KLT-GSLPIEVGKLKILEFLYVYENR-LEGEIPSTFGNCIRLEQLGMGGNL-FQGPISSSLGSLRGLRVLDLSQN 497 (949)
Q Consensus 423 s~N--~l~-~~~p~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~l~~L~~L~l~~N~-l~~~~~~~~~~l~~L~~L~Ls~N 497 (949)
++| .++ +.+|..+..+++|+.|++++|. +++..+..++.+++|+.|++++|. +.......++.+++|+.|++++|
T Consensus 203 ~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~l~~~~~L~~L~l~~~ 282 (336)
T 2ast_B 203 SGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGI 282 (336)
T ss_dssp CSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCTTCCGGGGGGGGGCTTCCEEECTTS
T ss_pred CCCcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhCCCCCCEeeCCCCCCCCHHHHHHHhcCCCCCEEeccCc
Confidence 999 565 4677788899999999999999 787888899999999999999995 33222236888999999999999
Q ss_pred cCCCcCcccccCC-c-cceEeCCCCcCcCcccc
Q 039533 498 NLSGEIPKFLAGL-S-LNNLNLSYNDLEGMVTT 528 (949)
Q Consensus 498 ~l~~~~p~~~~~~-~-L~~l~ls~N~l~~~~~~ 528 (949)
++. ..+..+ . +..|++++|++++..|.
T Consensus 283 -i~~---~~~~~l~~~l~~L~l~~n~l~~~~~~ 311 (336)
T 2ast_B 283 -VPD---GTLQLLKEALPHLQINCSHFTTIARP 311 (336)
T ss_dssp -SCT---TCHHHHHHHSTTSEESCCCSCCTTCS
T ss_pred -cCH---HHHHHHHhhCcceEEecccCccccCC
Confidence 432 233333 2 88889999999998775
No 346
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.87 E-value=1.8e-22 Score=219.52 Aligned_cols=191 Identities=20% Similarity=0.295 Sum_probs=131.3
Q ss_pred cccEEEccCccccCCCCCCCCCCCcccEEEeecceecccCCCcccccCCCCEEecCCcccccccCcccccccccceeecc
Q 039533 295 TIKTLFLNNNKIYGSIPAGIGNFVNLQRLDMWNNQLSGTIPPAIGELQNLKILGLNRNKLSGNIPPSIGNLKMLLNLFLN 374 (949)
Q Consensus 295 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 374 (949)
+|++|++++|.++. ++ .+..+++|++|+|++|.+++..+ +..+++|++|+|++|++++. +.+.++++|+.|+++
T Consensus 42 ~L~~L~l~~~~i~~-l~-~~~~l~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~~n~l~~~--~~~~~l~~L~~L~l~ 115 (308)
T 1h6u_A 42 GITTLSAFGTGVTT-IE-GVQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLKNV--SAIAGLQSIKTLDLT 115 (308)
T ss_dssp TCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCSCC--GGGTTCTTCCEEECT
T ss_pred CcCEEEeeCCCccC-ch-hhhccCCCCEEEccCCcCCCChh--HccCCCCCEEEccCCcCCCc--hhhcCCCCCCEEECC
Confidence 46666666666653 33 46666777777777777764433 66777777777777777642 256677777777777
Q ss_pred cccccccCCCCCCCCCCCcEEEeeCccccCCCCCcccCCcccceeeccCCCccCCCCccccccccccceeeecccccccc
Q 039533 375 DNFLEVSIPSSLGQCESLIEINLSNNNLSGTIPPQFFSLSSLSISLDWSRNKLTGSLPIEVGKLKILEFLYVYENRLEGE 454 (949)
Q Consensus 375 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~l~~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 454 (949)
+|.+++. +. +..+++|++|++++|++++. +. +..+++| +.|++++|++++..+ +..+++|+.|++++|++++.
T Consensus 116 ~n~l~~~-~~-l~~l~~L~~L~l~~n~l~~~-~~-l~~l~~L-~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~ 188 (308)
T 1h6u_A 116 STQITDV-TP-LAGLSNLQVLYLDLNQITNI-SP-LAGLTNL-QYLSIGNAQVSDLTP--LANLSKLTTLKADDNKISDI 188 (308)
T ss_dssp TSCCCCC-GG-GTTCTTCCEEECCSSCCCCC-GG-GGGCTTC-CEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCC
T ss_pred CCCCCCc-hh-hcCCCCCCEEECCCCccCcC-cc-ccCCCCc-cEEEccCCcCCCChh--hcCCCCCCEEECCCCccCcC
Confidence 7777643 22 66777777777777777643 32 6666666 667777777775333 77778888888888888754
Q ss_pred CCcccccccchhhcccCccccccccCCCcCCCCCCCEEECCCCcCCCc
Q 039533 455 IPSTFGNCIRLEQLGMGGNLFQGPISSSLGSLRGLRVLDLSQNNLSGE 502 (949)
Q Consensus 455 ~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 502 (949)
.+ +..+++|+.|+|++|++++..+ +..+++|+.|+|++|++++.
T Consensus 189 ~~--l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~l~~N~i~~~ 232 (308)
T 1h6u_A 189 SP--LASLPNLIEVHLKNNQISDVSP--LANTSNLFIVTLTNQTITNQ 232 (308)
T ss_dssp GG--GGGCTTCCEEECTTSCCCBCGG--GTTCTTCCEEEEEEEEEECC
T ss_pred hh--hcCCCCCCEEEccCCccCcccc--ccCCCCCCEEEccCCeeecC
Confidence 33 7778888888888888886553 78888888888888888753
No 347
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.87 E-value=3.2e-22 Score=217.61 Aligned_cols=192 Identities=24% Similarity=0.388 Sum_probs=112.1
Q ss_pred CCCCCcEEECCCCCCCCCCCCCcCCCCCccEEeccccccCCCCCCcccCCCccccccccCcccccccccccCCCCChhhh
Q 039533 159 SLSKTEILNLGSNHLTGSIPSSLGNLSSIHTISLAYNNLDGTIPNSFGWFENLVFLSLAANNLSVVENKLTGEVPSLEKL 238 (949)
Q Consensus 159 ~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~l~~~~~~l~~l 238 (949)
.+++|++|++++|.++ .+| .+..+++|++|+|++|++++..+ +..+++|++|+|++|+++.+ +.+..+
T Consensus 39 ~l~~L~~L~l~~~~i~-~l~-~~~~l~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~~n~l~~~--------~~~~~l 106 (308)
T 1h6u_A 39 DLDGITTLSAFGTGVT-TIE-GVQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLKNV--------SAIAGL 106 (308)
T ss_dssp HHHTCCEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCSCC--------GGGTTC
T ss_pred HcCCcCEEEeeCCCcc-Cch-hhhccCCCCEEEccCCcCCCChh--HccCCCCCEEEccCCcCCCc--------hhhcCC
Confidence 4455566666666665 233 45566666666666666653332 55666666666666555432 122222
Q ss_pred ccccccccccCCCCCCCCCCcchhccccccCcccEEEccCCCCCccCCchhhcccccccEEEccCccccCCCCCCCCCCC
Q 039533 239 QRLQHFTITSNSLGSGGNDDLSFLCSLTNATRLTWMHINSNNFGGLLPGCISNLSKTIKTLFLNNNKIYGSIPAGIGNFV 318 (949)
Q Consensus 239 ~~L~~L~l~~N~l~~~~~~~~~~~~~l~~~~~L~~L~L~~N~l~~~~p~~~~~l~~~L~~L~L~~N~l~~~~~~~~~~l~ 318 (949)
+ +|++|++++|++++. + .+..+ ++|++|++++|++++..+ +..++
T Consensus 107 ~------------------------------~L~~L~l~~n~l~~~-~-~l~~l-~~L~~L~l~~n~l~~~~~--l~~l~ 151 (308)
T 1h6u_A 107 Q------------------------------SIKTLDLTSTQITDV-T-PLAGL-SNLQVLYLDLNQITNISP--LAGLT 151 (308)
T ss_dssp T------------------------------TCCEEECTTSCCCCC-G-GGTTC-TTCCEEECCSSCCCCCGG--GGGCT
T ss_pred C------------------------------CCCEEECCCCCCCCc-h-hhcCC-CCCCEEECCCCccCcCcc--ccCCC
Confidence 3 333333333333332 1 13333 346666666666654333 66677
Q ss_pred cccEEEeecceecccCCCcccccCCCCEEecCCcccccccCcccccccccceeecccccccccCCCCCCCCCCCcEEEee
Q 039533 319 NLQRLDMWNNQLSGTIPPAIGELQNLKILGLNRNKLSGNIPPSIGNLKMLLNLFLNDNFLEVSIPSSLGQCESLIEINLS 398 (949)
Q Consensus 319 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~ 398 (949)
+|++|+|++|++++..+ +..+++|+.|+|++|++++..+ +..+++|+.|+|++|++++..+ +..+++|+.|+++
T Consensus 152 ~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~l~ 225 (308)
T 1h6u_A 152 NLQYLSIGNAQVSDLTP--LANLSKLTTLKADDNKISDISP--LASLPNLIEVHLKNNQISDVSP--LANTSNLFIVTLT 225 (308)
T ss_dssp TCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECTTSCCCBCGG--GTTCTTCCEEEEE
T ss_pred CccEEEccCCcCCCChh--hcCCCCCCEEECCCCccCcChh--hcCCCCCCEEEccCCccCcccc--ccCCCCCCEEEcc
Confidence 77777777777764333 6677777777777777774433 6777777777777777775443 6777777777777
Q ss_pred Ccccc
Q 039533 399 NNNLS 403 (949)
Q Consensus 399 ~N~l~ 403 (949)
+|+++
T Consensus 226 ~N~i~ 230 (308)
T 1h6u_A 226 NQTIT 230 (308)
T ss_dssp EEEEE
T ss_pred CCeee
Confidence 77776
No 348
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.87 E-value=7.1e-22 Score=219.18 Aligned_cols=202 Identities=15% Similarity=0.109 Sum_probs=113.7
Q ss_pred cEEEccCCCCCccCCchhhcccccccEEEccCccccCCCCCCCCCCCcccEEEeecceecccCC-CcccccCCCCE-Eec
Q 039533 272 TWMHINSNNFGGLLPGCISNLSKTIKTLFLNNNKIYGSIPAGIGNFVNLQRLDMWNNQLSGTIP-PAIGELQNLKI-LGL 349 (949)
Q Consensus 272 ~~L~L~~N~l~~~~p~~~~~l~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~-L~L 349 (949)
+.++.++++++. +|..+ ++++++|+|++|+|+.+.+.+|.++++|++|+|++|++.+.+| .+|.++++++. +.+
T Consensus 12 ~~v~C~~~~Lt~-iP~~l---~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~ 87 (350)
T 4ay9_X 12 RVFLCQESKVTE-IPSDL---PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIE 87 (350)
T ss_dssp TEEEEESTTCCS-CCTTC---CTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEE
T ss_pred CEEEecCCCCCc-cCcCc---CCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcc
Confidence 345666666663 34332 3456677777777765444566677777777777776654444 45666666554 455
Q ss_pred CCcccccccCcccccccccceeecccccccccCCCCCCCCCCCcEEEeeC-ccccCCCCCcccCCcccceeeccCCCccC
Q 039533 350 NRNKLSGNIPPSIGNLKMLLNLFLNDNFLEVSIPSSLGQCESLIEINLSN-NNLSGTIPPQFFSLSSLSISLDWSRNKLT 428 (949)
Q Consensus 350 s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~-N~l~~~~p~~~~~l~~l~~~L~ls~N~l~ 428 (949)
++|+|+...|..|.++++|++|++++|++++..+..+....++..|++.+ |++....+..|..+...++.|+|++|+|+
T Consensus 88 ~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i~ 167 (350)
T 4ay9_X 88 KANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQ 167 (350)
T ss_dssp EETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCC
T ss_pred cCCcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccccccccccccchhhcchhhhhhcccccccc
Confidence 56666666666666677777777777766655555555666666666654 44543333344444433355666666665
Q ss_pred CCCccccccccccceeeecc-ccccccCCcccccccchhhcccCccccccc
Q 039533 429 GSLPIEVGKLKILEFLYVYE-NRLEGEIPSTFGNCIRLEQLGMGGNLFQGP 478 (949)
Q Consensus 429 ~~~p~~~~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~ 478 (949)
. +|.......+|+.|++++ |.++...+..|.++++|+.|+|++|+|+..
T Consensus 168 ~-i~~~~f~~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~~l 217 (350)
T 4ay9_X 168 E-IHNSAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSL 217 (350)
T ss_dssp E-ECTTSSTTEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCCCC
T ss_pred C-CChhhccccchhHHhhccCCcccCCCHHHhccCcccchhhcCCCCcCcc
Confidence 3 333333344555555553 444432233455556666666666665533
No 349
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.87 E-value=1.5e-24 Score=244.59 Aligned_cols=200 Identities=19% Similarity=0.205 Sum_probs=110.3
Q ss_pred CCCCcccEEEeecceecc----cCCCcccccCCCCEEecCCcccccccCcccccc-cccceeecccccccccCCCCCCCC
Q 039533 315 GNFVNLQRLDMWNNQLSG----TIPPAIGELQNLKILGLNRNKLSGNIPPSIGNL-KMLLNLFLNDNFLEVSIPSSLGQC 389 (949)
Q Consensus 315 ~~l~~L~~L~L~~N~l~~----~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l-~~L~~L~L~~N~l~~~~p~~~~~l 389 (949)
..+++|++|+|++|.+++ .+|..+..+++|++|+|++|.+++..+..+... ..+ ..|.+.+. .
T Consensus 91 ~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l-----~~~~~~~~-------~ 158 (386)
T 2ca6_A 91 LKCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQEL-----AVNKKAKN-------A 158 (386)
T ss_dssp TTCTTCCEEECCSCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHH-----HHHHHHHT-------C
T ss_pred hhCCcccEEECCCCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHH-----hhhhhccc-------C
Confidence 455566666666666654 345555556666666666666653333222221 000 00000000 0
Q ss_pred CCCcEEEeeCcccc-CCCC---CcccCCcccceeeccCCCccC--C---CCccccccccccceeeecccccc----ccCC
Q 039533 390 ESLIEINLSNNNLS-GTIP---PQFFSLSSLSISLDWSRNKLT--G---SLPIEVGKLKILEFLYVYENRLE----GEIP 456 (949)
Q Consensus 390 ~~L~~L~l~~N~l~-~~~p---~~~~~l~~l~~~L~ls~N~l~--~---~~p~~~~~l~~L~~L~Ls~N~l~----~~~p 456 (949)
++|++|+|++|+++ +.+| ..+..+++| +.|++++|+++ | ..|..+..+++|+.|+|++|+++ +.+|
T Consensus 159 ~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L-~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~ 237 (386)
T 2ca6_A 159 PPLRSIICGRNRLENGSMKEWAKTFQSHRLL-HTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALA 237 (386)
T ss_dssp CCCCEEECCSSCCTGGGHHHHHHHHHHCTTC-CEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHH
T ss_pred CCCcEEECCCCCCCcHHHHHHHHHHHhCCCc-CEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHH
Confidence 44445555555443 2222 233334444 44555555554 1 23335666677777777777774 4566
Q ss_pred cccccccchhhcccCccccccc----cCCCc--CCCCCCCEEECCCCcCCC----cCcccc-cCCc-cceEeCCCCcCcC
Q 039533 457 STFGNCIRLEQLGMGGNLFQGP----ISSSL--GSLRGLRVLDLSQNNLSG----EIPKFL-AGLS-LNNLNLSYNDLEG 524 (949)
Q Consensus 457 ~~~~~l~~L~~L~l~~N~l~~~----~~~~~--~~l~~L~~L~Ls~N~l~~----~~p~~~-~~~~-L~~l~ls~N~l~~ 524 (949)
..+..+++|+.|+|++|.+++. ++..+ +.+++|+.|+|++|++++ .+|..+ ..++ |+.|++++|++++
T Consensus 238 ~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~ 317 (386)
T 2ca6_A 238 IALKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSE 317 (386)
T ss_dssp HHGGGCTTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCT
T ss_pred HHHccCCCcCEEECCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCCc
Confidence 6677777777777777777654 45555 337778888888888876 366655 3333 7888888888877
Q ss_pred ccc
Q 039533 525 MVT 527 (949)
Q Consensus 525 ~~~ 527 (949)
..+
T Consensus 318 ~~~ 320 (386)
T 2ca6_A 318 EDD 320 (386)
T ss_dssp TSH
T ss_pred chh
Confidence 654
No 350
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.86 E-value=3.5e-22 Score=213.50 Aligned_cols=165 Identities=20% Similarity=0.088 Sum_probs=127.6
Q ss_pred HHHHHHHhcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCC------------------cchHHHHHHHHHHHh
Q 039533 618 YQDLYNATSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHH------------------GASRSFIAECKALKS 679 (949)
Q Consensus 618 ~~~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~------------------~~~~~~~~E~~~l~~ 679 (949)
...+......|.+.+.||+|+||.||+|.+ .+++.||||+++.... .....+.+|++++++
T Consensus 82 l~~~~~~~~~~~~~~~iG~G~~g~Vy~~~~-~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~ 160 (282)
T 1zar_A 82 LHRLVRSGKVDAIGKLMGEGKESAVFNCYS-EKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQK 160 (282)
T ss_dssp HHHHHHTTSCSEEEEEEEECSSEEEEEEEE-TTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhCCeEEEecCEeccCCCceEEEEEe-CCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHh
Confidence 344555666788889999999999999999 6899999999964321 123568899999999
Q ss_pred cCCCcceeEEeeeecccccCCccceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCC
Q 039533 680 IRHRNLVKVLTACLGADYRGNDFKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQ 759 (949)
Q Consensus 680 l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~ 759 (949)
++| +++.+++.. ...++||||+++++|.+ +.. .....++.|++.||+|||+.
T Consensus 161 l~~---~~v~~~~~~------~~~~lvmE~~~g~~L~~-l~~----------------~~~~~i~~qi~~~l~~lH~~-- 212 (282)
T 1zar_A 161 LQG---LAVPKVYAW------EGNAVLMELIDAKELYR-VRV----------------ENPDEVLDMILEEVAKFYHR-- 212 (282)
T ss_dssp TTT---SSSCCEEEE------ETTEEEEECCCCEEGGG-CCC----------------SCHHHHHHHHHHHHHHHHHT--
T ss_pred ccC---CCcCeEEec------cceEEEEEecCCCcHHH-cch----------------hhHHHHHHHHHHHHHHHHHC--
Confidence 994 555554321 25799999999999998 531 12446999999999999987
Q ss_pred CCeEecCCCCCCeeecCCCceEEeecccceecCCCCCccccccccCccCccCccccCC----------CccCCccchHH
Q 039533 760 PVTAHCDLKPSNVLLDDYMTARVGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVG----------CEVSTNGDVYS 828 (949)
Q Consensus 760 ~~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~----------~~~~~~sDiwS 828 (949)
+|+||||||+||+++ ++.+||+|||+|+. +..|+|||++.+ .++...+|+|.
T Consensus 213 -giiHrDlkp~NILl~-~~~vkl~DFG~a~~---------------~~~~~a~e~l~rdv~~i~~~f~~~~~~~~~~~~ 274 (282)
T 1zar_A 213 -GIVHGDLSQYNVLVS-EEGIWIIDFPQSVE---------------VGEEGWREILERDVRNIITYFSRTYRTEKDINS 274 (282)
T ss_dssp -TEECSCCSTTSEEEE-TTEEEECCCTTCEE---------------TTSTTHHHHHHHHHHHHHHHHHHHHCCCCCHHH
T ss_pred -CCEeCCCCHHHEEEE-CCcEEEEECCCCeE---------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCChHH
Confidence 999999999999999 99999999999863 345788888653 34555566654
No 351
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.86 E-value=2.9e-21 Score=197.38 Aligned_cols=174 Identities=24% Similarity=0.239 Sum_probs=94.0
Q ss_pred cccEEEeecceecccCCCcccccCCCCEEecCCcccccccCcccccccccceeecccccccccCCCCCCCCCCCcEEEee
Q 039533 319 NLQRLDMWNNQLSGTIPPAIGELQNLKILGLNRNKLSGNIPPSIGNLKMLLNLFLNDNFLEVSIPSSLGQCESLIEINLS 398 (949)
Q Consensus 319 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~ 398 (949)
+|++|+|++|++++..+..|.++++|++|+|++|++++..+..|.++++|++|+|++|.+++..+..|..+++|++|+++
T Consensus 29 ~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~ 108 (208)
T 2o6s_A 29 QTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELALN 108 (208)
T ss_dssp TCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCCcCCccCHhHhcCccCCCEEEcC
Confidence 44445555555444334444445555555555555544333344445555555555555554444444555555555555
Q ss_pred CccccCCCCCcccCCcccceeeccCCCccCCCCccccccccccceeeeccccccccCCcccccccchhhcccCccccccc
Q 039533 399 NNNLSGTIPPQFFSLSSLSISLDWSRNKLTGSLPIEVGKLKILEFLYVYENRLEGEIPSTFGNCIRLEQLGMGGNLFQGP 478 (949)
Q Consensus 399 ~N~l~~~~p~~~~~l~~l~~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~ 478 (949)
+|++++..+..+..+++| +.|++++|++++..+..+..+++|+.|++++|.+.+ .+++|+.|+++.|+++|.
T Consensus 109 ~N~l~~~~~~~~~~l~~L-~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~-------~~~~l~~L~~~~n~~~g~ 180 (208)
T 2o6s_A 109 TNQLQSLPDGVFDKLTQL-KDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDC-------TCPGIRYLSEWINKHSGV 180 (208)
T ss_dssp SSCCCCCCTTTTTTCTTC-CEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCC-------CTTTTHHHHHHHHHCTTT
T ss_pred CCcCcccCHhHhccCCcC-CEEECCCCccceeCHHHhccCCCccEEEecCCCeec-------CCCCHHHHHHHHHhCCce
Confidence 555553333334445555 455555555554444456666777777777776653 344677777777777777
Q ss_pred cCCCcCCCCCCCEEECCCCcCCCcCc
Q 039533 479 ISSSLGSLRGLRVLDLSQNNLSGEIP 504 (949)
Q Consensus 479 ~~~~~~~l~~L~~L~Ls~N~l~~~~p 504 (949)
+|..++.++. ++..+...|..+
T Consensus 181 ip~~~~~l~~----~~~~C~~~~~~~ 202 (208)
T 2o6s_A 181 VRNSAGSVAP----DSAKCSGSGKPV 202 (208)
T ss_dssp BBCTTSSBCT----TCSBBTTTCCBG
T ss_pred eeccCccccC----CccccccCCCcc
Confidence 7777776655 444444444333
No 352
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.85 E-value=1.3e-21 Score=227.98 Aligned_cols=186 Identities=28% Similarity=0.310 Sum_probs=105.4
Q ss_pred ccEEEccCccccCCCCCCCCCCCcccEEEeecceecccCCCcccccCCCCEEecCCcccccccCcccccccccceeeccc
Q 039533 296 IKTLFLNNNKIYGSIPAGIGNFVNLQRLDMWNNQLSGTIPPAIGELQNLKILGLNRNKLSGNIPPSIGNLKMLLNLFLND 375 (949)
Q Consensus 296 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 375 (949)
++.|+|++|+|++ +|..+. ++|++|+|++|+|+ .+| ..+++|+.|+|++|+|++ +|. +.+ +|+.|+|++
T Consensus 61 L~~L~Ls~n~L~~-lp~~l~--~~L~~L~Ls~N~l~-~ip---~~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls~ 129 (571)
T 3cvr_A 61 FSELQLNRLNLSS-LPDNLP--PQITVLEITQNALI-SLP---ELPASLEYLDACDNRLST-LPE-LPA--SLKHLDVDN 129 (571)
T ss_dssp CSEEECCSSCCSC-CCSCCC--TTCSEEECCSSCCS-CCC---CCCTTCCEEECCSSCCSC-CCC-CCT--TCCEEECCS
T ss_pred ccEEEeCCCCCCc-cCHhHc--CCCCEEECcCCCCc-ccc---cccCCCCEEEccCCCCCC-cch-hhc--CCCEEECCC
Confidence 4455555555543 333332 44555555555555 344 234555555555555554 444 333 555555555
Q ss_pred ccccccCCCCCCCCCCCcEEEeeCccccCCCCCcccCCcccceeeccCCCccCCCCccccccccccceeeeccccccccC
Q 039533 376 NFLEVSIPSSLGQCESLIEINLSNNNLSGTIPPQFFSLSSLSISLDWSRNKLTGSLPIEVGKLKILEFLYVYENRLEGEI 455 (949)
Q Consensus 376 N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~l~~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 455 (949)
|.|++ +|. .+++|+.|+|++|+|++ +|. .+++| +.|+|++|+|++ +|. +. ++|+.|+|++|+|+ .+
T Consensus 130 N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L-~~L~Ls~N~L~~-lp~-l~--~~L~~L~Ls~N~L~-~l 195 (571)
T 3cvr_A 130 NQLTM-LPE---LPALLEYINADNNQLTM-LPE---LPTSL-EVLSVRNNQLTF-LPE-LP--ESLEALDVSTNLLE-SL 195 (571)
T ss_dssp SCCSC-CCC---CCTTCCEEECCSSCCSC-CCC---CCTTC-CEEECCSSCCSC-CCC-CC--TTCCEEECCSSCCS-SC
T ss_pred CcCCC-CCC---cCccccEEeCCCCccCc-CCC---cCCCc-CEEECCCCCCCC-cch-hh--CCCCEEECcCCCCC-ch
Confidence 55554 333 34556666666666553 444 23444 455666666654 444 43 66677777777776 55
Q ss_pred Ccccccccch-------hhcccCccccccccCCCcCCCCCCCEEECCCCcCCCcCcccccCC
Q 039533 456 PSTFGNCIRL-------EQLGMGGNLFQGPISSSLGSLRGLRVLDLSQNNLSGEIPKFLAGL 510 (949)
Q Consensus 456 p~~~~~l~~L-------~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~ 510 (949)
|. |.. +| +.|+|++|+|+ .+|..+..+++|+.|+|++|+|++.+|..+..+
T Consensus 196 p~-~~~--~L~~~~~~L~~L~Ls~N~l~-~lp~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l 253 (571)
T 3cvr_A 196 PA-VPV--RNHHSEETEIFFRCRENRIT-HIPENILSLDPTCTIILEDNPLSSRIRESLSQQ 253 (571)
T ss_dssp CC-CC----------CCEEEECCSSCCC-CCCGGGGGSCTTEEEECCSSSCCHHHHHHHHHH
T ss_pred hh-HHH--hhhcccccceEEecCCCcce-ecCHHHhcCCCCCEEEeeCCcCCCcCHHHHHHh
Confidence 55 444 55 77777777777 467777778888888888888887777766543
No 353
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.85 E-value=8e-21 Score=194.06 Aligned_cols=194 Identities=19% Similarity=0.162 Sum_probs=158.6
Q ss_pred cEEEccCCCCCccCCchhhcccccccEEEccCccccCCCCCCCCCCCcccEEEeecceecccCCCcccccCCCCEEecCC
Q 039533 272 TWMHINSNNFGGLLPGCISNLSKTIKTLFLNNNKIYGSIPAGIGNFVNLQRLDMWNNQLSGTIPPAIGELQNLKILGLNR 351 (949)
Q Consensus 272 ~~L~L~~N~l~~~~p~~~~~l~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~ 351 (949)
+.++++++.++.. |.. ++++|++|++++|++++..+..|..+++|++|+|++|++++..+..|..+++|++|+|++
T Consensus 10 ~~v~c~~~~l~~~-p~~---~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~ 85 (208)
T 2o6s_A 10 TTVECYSQGRTSV-PTG---IPAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLST 85 (208)
T ss_dssp TEEECCSSCCSSC-CSC---CCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CEEEecCCCccCC-CCC---CCCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCC
Confidence 4567777777644 332 235789999999999977777788999999999999999977777788999999999999
Q ss_pred cccccccCcccccccccceeecccccccccCCCCCCCCCCCcEEEeeCccccCCCCCcccCCcccceeeccCCCccCCCC
Q 039533 352 NKLSGNIPPSIGNLKMLLNLFLNDNFLEVSIPSSLGQCESLIEINLSNNNLSGTIPPQFFSLSSLSISLDWSRNKLTGSL 431 (949)
Q Consensus 352 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~l~~~L~ls~N~l~~~~ 431 (949)
|++++..+..|.++++|++|++++|++++..+..|..+++|++|++++|++++..+..+..+++| +.|++++|.+.+
T Consensus 86 n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L-~~L~l~~N~~~~-- 162 (208)
T 2o6s_A 86 NQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSL-QYIWLHDNPWDC-- 162 (208)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTC-CEEECCSCCBCC--
T ss_pred CcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCc-cEEEecCCCeec--
Confidence 99997777778999999999999999998777788999999999999999996666667888888 789999998875
Q ss_pred ccccccccccceeeeccccccccCCcccccccchhhcccCccccccccCC
Q 039533 432 PIEVGKLKILEFLYVYENRLEGEIPSTFGNCIRLEQLGMGGNLFQGPISS 481 (949)
Q Consensus 432 p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~ 481 (949)
.++.|++|+++.|+++|.+|..++.++. ++..+...+..+.
T Consensus 163 -----~~~~l~~L~~~~n~~~g~ip~~~~~l~~----~~~~C~~~~~~~~ 203 (208)
T 2o6s_A 163 -----TCPGIRYLSEWINKHSGVVRNSAGSVAP----DSAKCSGSGKPVR 203 (208)
T ss_dssp -----CTTTTHHHHHHHHHCTTTBBCTTSSBCT----TCSBBTTTCCBGG
T ss_pred -----CCCCHHHHHHHHHhCCceeeccCccccC----CccccccCCCcce
Confidence 3457999999999999999999988765 4555555444443
No 354
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.84 E-value=7.5e-21 Score=197.12 Aligned_cols=162 Identities=24% Similarity=0.248 Sum_probs=142.7
Q ss_pred CccCCCCcceeeeeEEeCCCCcEEEEEcCCCCCCccccCCCCCCCCCceeeccCceeccccCCcccCcccCcEEeecccc
Q 039533 45 TWNESIHFCKWYGVTCSRRHQRVTLLDLRSLKLAGSVSHFIGNLSFLKQLYLQVNSFTHEIPSEIGGLRRLKVLALNNNS 124 (949)
Q Consensus 45 sW~~~~~~C~w~gv~C~~~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~ 124 (949)
-|..+.+.|+|.+|.|+.. +++ .+|..+. ++|++|+|++|++++..|..|.++++|++|+|++|+
T Consensus 11 ~~~~~~~~Cs~~~v~c~~~------------~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~ 75 (229)
T 3e6j_A 11 AACPSQCSCSGTTVDCRSK------------RHA-SVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQ 75 (229)
T ss_dssp CCCCTTCEEETTEEECTTS------------CCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred ccCCCCCEEeCCEeEccCC------------CcC-ccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCC
Confidence 3445678899999999643 232 5555444 899999999999999889999999999999999999
Q ss_pred ccCcCCCCCCCCccceeecCCCccccccccccccCCCCCcEEECCCCCCCCCCCCCcCCCCCccEEeccccccCCCCCCc
Q 039533 125 ICGEIPTNISRCSTLIPIHPQNNQLVGKILSRFSSLSKTEILNLGSNHLTGSIPSSLGNLSSIHTISLAYNNLDGTIPNS 204 (949)
Q Consensus 125 l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~ 204 (949)
|++..+..|.++++|++|+|++|+|++..+..|..+++|++|+|++|+|+ .+|..+..+++|++|+|++|+|++..+..
T Consensus 76 l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~ 154 (229)
T 3e6j_A 76 LGALPVGVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGA 154 (229)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTT
T ss_pred CCCcChhhcccCCCcCEEECCCCcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHHH
Confidence 98655667899999999999999999999999999999999999999999 78999999999999999999999777788
Q ss_pred ccCCCccccccccCcccc
Q 039533 205 FGWFENLVFLSLAANNLS 222 (949)
Q Consensus 205 ~~~l~~L~~L~Ls~N~l~ 222 (949)
|..+++|++|+|++|.+.
T Consensus 155 ~~~l~~L~~L~l~~N~~~ 172 (229)
T 3e6j_A 155 FDRLSSLTHAYLFGNPWD 172 (229)
T ss_dssp TTTCTTCCEEECTTSCBC
T ss_pred HhCCCCCCEEEeeCCCcc
Confidence 999999999999999865
No 355
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.84 E-value=3.5e-22 Score=241.86 Aligned_cols=191 Identities=22% Similarity=0.219 Sum_probs=100.0
Q ss_pred CChhhHHHHHHHHhccCCCCCCCccCcc-CCCCcceeeeeEEeCCCCcEEEEEcCCCCCCccccCCCCCCCCCceeeccC
Q 039533 20 GNETDRVALLEFKSKSTYDPVGVLGTWN-ESIHFCKWYGVTCSRRHQRVTLLDLRSLKLAGSVSHFIGNLSFLKQLYLQV 98 (949)
Q Consensus 20 ~~~~~~~aLl~~k~~~~~~~~~~l~sW~-~~~~~C~w~gv~C~~~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~ 98 (949)
..+.++++|+++..+...+....-..|. ..+..+.|.+++++. .+++.|+|.++++... +..+ |+.++|+.
T Consensus 129 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~--~~~~~l~L~~n~~~~~-~~~~-----l~~l~Ls~ 200 (727)
T 4b8c_D 129 LVDCTKQALMEMADTLTDSKTAKKQQPTGDSTPSGTATNSAVST--PLTPKIELFANGKDEA-NQAL-----LQHKKLSQ 200 (727)
T ss_dssp ---CCCHHHHHHHHHHHHHHTTC---------------------------------------------------------
T ss_pred ccccchhhhhhhhhhcccccCcccCCCcCCCCccccCCCceecC--CccceEEeeCCCCCcc-hhhH-----hhcCccCc
Confidence 4578999999999776444444555674 335678999999875 5799999999988863 3333 33344444
Q ss_pred ceecc---------ccCCcccCcccCcEEeeccccccCcCCCCCCCCccceeecCCCccccccccccccCCCCCcEEECC
Q 039533 99 NSFTH---------EIPSEIGGLRRLKVLALNNNSICGEIPTNISRCSTLIPIHPQNNQLVGKILSRFSSLSKTEILNLG 169 (949)
Q Consensus 99 n~l~~---------~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~L~~L~~L~Ls 169 (949)
|.+.+ ..|..|..+++|+.|+|++|.+. .+|..+.++++|++|+|++|.|+ .+|..|.+|++|++|+|+
T Consensus 201 ~~i~~~~~~~n~~~~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls 278 (727)
T 4b8c_D 201 YSIDEDDDIENRMVMPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLS 278 (727)
T ss_dssp ---------------------CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECT
T ss_pred ccccCccccccceecChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCc
Confidence 44332 45777888888888888888887 77877778888888888888887 566777888888888888
Q ss_pred CCCCCCCCCCCcCCCCCccEEeccccccCCCCCCcccCCCccccccccCcccc
Q 039533 170 SNHLTGSIPSSLGNLSSIHTISLAYNNLDGTIPNSFGWFENLVFLSLAANNLS 222 (949)
Q Consensus 170 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 222 (949)
+|+|+ .+|..|+++++|++|+|++|.|+ .+|..|+.+++|++|+|++|.|+
T Consensus 279 ~N~l~-~lp~~~~~l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~ 329 (727)
T 4b8c_D 279 HNRLT-SLPAELGSCFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLE 329 (727)
T ss_dssp TSCCS-SCCSSGGGGTTCSEEECCSSCCC-CCCSSTTSCTTCCCEECTTSCCC
T ss_pred CCcCC-ccChhhcCCCCCCEEECCCCCCC-ccChhhhcCCCccEEeCCCCccC
Confidence 88888 66777888888888888888876 66767777777777777766654
No 356
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.82 E-value=5.4e-20 Score=189.33 Aligned_cols=149 Identities=19% Similarity=0.260 Sum_probs=135.0
Q ss_pred EcCCCCCCccccCCCCCCCCCceeeccCceeccccCCcccCcccCcEEeeccccccCcCCCCCCCCccceeecCCCcccc
Q 039533 71 DLRSLKLAGSVSHFIGNLSFLKQLYLQVNSFTHEIPSEIGGLRRLKVLALNNNSICGEIPTNISRCSTLIPIHPQNNQLV 150 (949)
Q Consensus 71 ~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~l~ 150 (949)
++++++++ .+|..+. ++|+.|+|++|++++..+..|..+++|++|+|++|+|++..|..|.++++|++|+|++|+|+
T Consensus 17 ~c~~~~l~-~iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~ 93 (220)
T 2v9t_B 17 DCRGKGLT-EIPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKIT 93 (220)
T ss_dssp ECTTSCCS-SCCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSCCC
T ss_pred EcCCCCcC-cCCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCcCC
Confidence 33445555 4565554 78999999999999877889999999999999999999888999999999999999999999
Q ss_pred ccccccccCCCCCcEEECCCCCCCCCCCCCcCCCCCccEEeccccccCCCCCCcccCCCccccccccCcccc
Q 039533 151 GKILSRFSSLSKTEILNLGSNHLTGSIPSSLGNLSSIHTISLAYNNLDGTIPNSFGWFENLVFLSLAANNLS 222 (949)
Q Consensus 151 ~~~~~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 222 (949)
...+..|.++++|++|+|++|+|++..|..|..+++|++|+|++|+|++..+..|..+++|++|+|++|.+.
T Consensus 94 ~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~ 165 (220)
T 2v9t_B 94 ELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFI 165 (220)
T ss_dssp CCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEE
T ss_pred ccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcC
Confidence 998899999999999999999999988999999999999999999999888888999999999999999875
No 357
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.80 E-value=2.7e-19 Score=184.02 Aligned_cols=151 Identities=26% Similarity=0.272 Sum_probs=136.8
Q ss_pred EEEcCCCCCCccccCCCCCCCCCceeeccCceeccccC-CcccCcccCcEEeeccccccCcCCCCCCCCccceeecCCCc
Q 039533 69 LLDLRSLKLAGSVSHFIGNLSFLKQLYLQVNSFTHEIP-SEIGGLRRLKVLALNNNSICGEIPTNISRCSTLIPIHPQNN 147 (949)
Q Consensus 69 ~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n 147 (949)
.+++++++++ .+|..+. ..+++|+|++|++++..| ..|.++++|++|+|++|+|++..|..|+++++|++|+|++|
T Consensus 15 ~l~~s~n~l~-~iP~~~~--~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N 91 (220)
T 2v70_A 15 TVDCSNQKLN-KIPEHIP--QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSN 91 (220)
T ss_dssp EEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred EeEeCCCCcc-cCccCCC--CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCCC
Confidence 4666777776 4666554 456899999999998765 46899999999999999999877889999999999999999
Q ss_pred cccccccccccCCCCCcEEECCCCCCCCCCCCCcCCCCCccEEeccccccCCCCCCcccCCCccccccccCcccc
Q 039533 148 QLVGKILSRFSSLSKTEILNLGSNHLTGSIPSSLGNLSSIHTISLAYNNLDGTIPNSFGWFENLVFLSLAANNLS 222 (949)
Q Consensus 148 ~l~~~~~~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 222 (949)
+|++..+..|..+++|++|+|++|+|++..|..|.++++|++|+|++|+|++..|..|..+++|++|+|++|.++
T Consensus 92 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 166 (220)
T 2v70_A 92 RLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFN 166 (220)
T ss_dssp CCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEE
T ss_pred ccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCc
Confidence 999999999999999999999999999988999999999999999999999998999999999999999999876
No 358
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.80 E-value=8.9e-20 Score=215.17 Aligned_cols=101 Identities=22% Similarity=0.235 Sum_probs=48.1
Q ss_pred cccCcEEeeccccccCcCCCCCCCCccceeecCCCccccccccccccCCCCCcEEECCCCCCCCCCCCCcCCCCCccEEe
Q 039533 112 LRRLKVLALNNNSICGEIPTNISRCSTLIPIHPQNNQLVGKILSRFSSLSKTEILNLGSNHLTGSIPSSLGNLSSIHTIS 191 (949)
Q Consensus 112 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 191 (949)
+.++..++|+.+.+.+.++ +..|.+|+.|++++|.|.... .|..+++|+.|+|++|.|++..| +..+++|+.|+
T Consensus 20 l~~l~~l~l~~~~i~~~~~--~~~L~~L~~L~l~~n~i~~l~--~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~ 93 (605)
T 1m9s_A 20 FAETIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIKSVQ--GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLF 93 (605)
T ss_dssp HHHHHHHHTTCSCTTSEEC--HHHHTTCCCCBCTTCCCCCCT--TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEE
T ss_pred HHHHHHHhccCCCcccccc--hhcCCCCCEEECcCCCCCCCh--HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEE
Confidence 3445555666666553332 344555555555555554332 34455555555555555553332 44555555555
Q ss_pred ccccccCCCCCCcccCCCccccccccCcc
Q 039533 192 LAYNNLDGTIPNSFGWFENLVFLSLAANN 220 (949)
Q Consensus 192 L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 220 (949)
|++|+|++ +| .+..+++|++|+|++|.
T Consensus 94 Ls~N~l~~-l~-~l~~l~~L~~L~Ls~N~ 120 (605)
T 1m9s_A 94 LDENKIKD-LS-SLKDLKKLKSLSLEHNG 120 (605)
T ss_dssp CCSSCCCC-CT-TSTTCTTCCEEECTTSC
T ss_pred CcCCCCCC-Ch-hhccCCCCCEEEecCCC
Confidence 55555542 12 34444444444444443
No 359
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.79 E-value=1.2e-19 Score=214.20 Aligned_cols=125 Identities=20% Similarity=0.268 Sum_probs=89.2
Q ss_pred CCCCceeeccCceeccccCCcccCcccCcEEeeccccccCcCCCCCCCCccceeecCCCccccccccccccCCCCCcEEE
Q 039533 88 LSFLKQLYLQVNSFTHEIPSEIGGLRRLKVLALNNNSICGEIPTNISRCSTLIPIHPQNNQLVGKILSRFSSLSKTEILN 167 (949)
Q Consensus 88 l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~L~~L~~L~ 167 (949)
+..+..+.|+.+.+...++ +..|++|+.|+|++|.+. .+| .|+.|++|+.|+|++|.|.+..+ |..+++|+.|+
T Consensus 20 l~~l~~l~l~~~~i~~~~~--~~~L~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~ 93 (605)
T 1m9s_A 20 FAETIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIK-SVQ-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLF 93 (605)
T ss_dssp HHHHHHHHTTCSCTTSEEC--HHHHTTCCCCBCTTCCCC-CCT-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEE
T ss_pred HHHHHHHhccCCCcccccc--hhcCCCCCEEECcCCCCC-CCh-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEE
Confidence 3445556667777765443 567788888888888886 444 57788888888888888877665 77888888888
Q ss_pred CCCCCCCCCCCCCcCCCCCccEEeccccccCCCCCCcccCCCccccccccCcccc
Q 039533 168 LGSNHLTGSIPSSLGNLSSIHTISLAYNNLDGTIPNSFGWFENLVFLSLAANNLS 222 (949)
Q Consensus 168 Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 222 (949)
|++|.|++ +| .+..+++|++|+|++|+|++. ..+..+++|+.|+|++|.|+
T Consensus 94 Ls~N~l~~-l~-~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~ 144 (605)
T 1m9s_A 94 LDENKIKD-LS-SLKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYLGNNKIT 144 (605)
T ss_dssp CCSSCCCC-CT-TSTTCTTCCEEECTTSCCCCC--GGGGGCTTCSEEECCSSCCC
T ss_pred CcCCCCCC-Ch-hhccCCCCCEEEecCCCCCCC--ccccCCCccCEEECCCCccC
Confidence 88888874 33 677888888888888888742 34666666666666666544
No 360
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.79 E-value=2.9e-22 Score=235.03 Aligned_cols=217 Identities=18% Similarity=0.187 Sum_probs=150.3
Q ss_pred cCcccCcEEeeccccccCcCCCCCCCCccceeecCCCccccccccccccCCCCCcEEECCCCCCCCCCCCCcCCCCCccE
Q 039533 110 GGLRRLKVLALNNNSICGEIPTNISRCSTLIPIHPQNNQLVGKILSRFSSLSKTEILNLGSNHLTGSIPSSLGNLSSIHT 189 (949)
Q Consensus 110 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 189 (949)
..+++|+.|+|++|+|+ .+|..+++|++|+.|++++|......+..+ ..+.+.+.+|..++++++|+.
T Consensus 346 ~~~~~L~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~~ll-----------~~~~~~~~~~~~l~~l~~L~~ 413 (567)
T 1dce_A 346 ATDEQLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTIILLM-----------RALDPLLYEKETLQYFSTLKA 413 (567)
T ss_dssp STTTTSSSCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHHHHH-----------HHHCTGGGHHHHHHHHHHHHH
T ss_pred ccCccceeccCChhhHH-hhHHHHHHHHHHHHhccccchhhhhHHHHH-----------HhcccccCCHHHHHHHHhccc
Confidence 56778888888888887 788888888888888887775322222111 112334567777888888888
Q ss_pred Ee-ccccccCCCCCCcccCCCccccccccCcccccccccccCCCCChhhhccccccccccCCCCCCCCCCcchhcccccc
Q 039533 190 IS-LAYNNLDGTIPNSFGWFENLVFLSLAANNLSVVENKLTGEVPSLEKLQRLQHFTITSNSLGSGGNDDLSFLCSLTNA 268 (949)
Q Consensus 190 L~-L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~l~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~~ 268 (949)
|+ ++.|.+ .+|+.+.+++|.|+.++..
T Consensus 414 L~~l~~n~~-----------~~L~~l~l~~n~i~~l~~~----------------------------------------- 441 (567)
T 1dce_A 414 VDPMRAAYL-----------DDLRSKFLLENSVLKMEYA----------------------------------------- 441 (567)
T ss_dssp HCGGGHHHH-----------HHHHHHHHHHHHHHHHHHT-----------------------------------------
T ss_pred Ccchhhccc-----------chhhhhhhhcccccccCcc-----------------------------------------
Confidence 88 677754 3677788888888865421
Q ss_pred CcccEEEccCCCCCccCCchhhcccccccEEEccCccccCCCCCCCCCCCcccEEEeecceecccCCCcccccCCCCEEe
Q 039533 269 TRLTWMHINSNNFGGLLPGCISNLSKTIKTLFLNNNKIYGSIPAGIGNFVNLQRLDMWNNQLSGTIPPAIGELQNLKILG 348 (949)
Q Consensus 269 ~~L~~L~L~~N~l~~~~p~~~~~l~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 348 (949)
.|+.|+|++|++++ +|. +..+ ++|+.|+|++|+|+ .+|..++.+++|++|+|++|+|++ +| .|+++++|+.|+
T Consensus 442 -~L~~L~Ls~n~l~~-lp~-~~~l-~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~ 514 (567)
T 1dce_A 442 -DVRVLHLAHKDLTV-LCH-LEQL-LLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELL 514 (567)
T ss_dssp -TCSEEECTTSCCSS-CCC-GGGG-TTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEE
T ss_pred -CceEEEecCCCCCC-CcC-cccc-ccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEE
Confidence 24455566666655 344 5555 35777777777777 667777778888888888888875 55 777788888888
Q ss_pred cCCccccccc-CcccccccccceeecccccccccCCCC---CCCCCCCcEEEe
Q 039533 349 LNRNKLSGNI-PPSIGNLKMLLNLFLNDNFLEVSIPSS---LGQCESLIEINL 397 (949)
Q Consensus 349 Ls~N~l~~~~-p~~~~~l~~L~~L~L~~N~l~~~~p~~---~~~l~~L~~L~l 397 (949)
|++|+|++.. |..++++++|+.|+|++|.+++..|.. +..+++|+.|++
T Consensus 515 Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~l~~~lp~L~~L~l 567 (567)
T 1dce_A 515 LCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLAEMLPSVSSILT 567 (567)
T ss_dssp CCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSCTTHHHHHCTTCSEEEC
T ss_pred CCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCccHHHHHHHHCcccCccCC
Confidence 8888887665 777888888888888888887654432 223677887764
No 361
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.79 E-value=2.6e-19 Score=199.32 Aligned_cols=175 Identities=25% Similarity=0.264 Sum_probs=115.1
Q ss_pred cEEEccCCCCCccCCchhhcccccccEEEccCccccCCCCCCCC-CCCcccEEEeecceecccCCCcccccCCCCEEecC
Q 039533 272 TWMHINSNNFGGLLPGCISNLSKTIKTLFLNNNKIYGSIPAGIG-NFVNLQRLDMWNNQLSGTIPPAIGELQNLKILGLN 350 (949)
Q Consensus 272 ~~L~L~~N~l~~~~p~~~~~l~~~L~~L~L~~N~l~~~~~~~~~-~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls 350 (949)
+.+++++|+++. +|..+ +..++.|+|++|+|++..+..+. .+++|++|+|++|+|++..+..|.++++|+.|+|+
T Consensus 21 ~~l~c~~~~l~~-iP~~~---~~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls 96 (361)
T 2xot_A 21 NILSCSKQQLPN-VPQSL---PSYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLS 96 (361)
T ss_dssp TEEECCSSCCSS-CCSSC---CTTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECC
T ss_pred CEEEeCCCCcCc-cCccC---CCCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECC
Confidence 567888887775 44433 34577788888888776666676 77788888888888877666777777888888888
Q ss_pred CcccccccCcccccccccceeecccccccccCCCCCCCCCCCcEEEeeCccccCCCCCcc----cCCcccceeeccCCCc
Q 039533 351 RNKLSGNIPPSIGNLKMLLNLFLNDNFLEVSIPSSLGQCESLIEINLSNNNLSGTIPPQF----FSLSSLSISLDWSRNK 426 (949)
Q Consensus 351 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~----~~l~~l~~~L~ls~N~ 426 (949)
+|+|++..+..|.++++|+.|+|++|+|++..|..|.++++|+.|+|++|+|+ .+|..+ ..+++| +.|+|++|+
T Consensus 97 ~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~-~l~~~~~~~~~~l~~L-~~L~L~~N~ 174 (361)
T 2xot_A 97 SNHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQIS-RFPVELIKDGNKLPKL-MLLDLSSNK 174 (361)
T ss_dssp SSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCC-SCCGGGTC----CTTC-CEEECCSSC
T ss_pred CCcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCC-eeCHHHhcCcccCCcC-CEEECCCCC
Confidence 88877666667777777777777777777777777777777777777777777 344433 234444 445555555
Q ss_pred cCCCCccccccccc--cceeeecccccc
Q 039533 427 LTGSLPIEVGKLKI--LEFLYVYENRLE 452 (949)
Q Consensus 427 l~~~~p~~~~~l~~--L~~L~Ls~N~l~ 452 (949)
|++..+..+..++. |+.|+|++|.+.
T Consensus 175 l~~l~~~~~~~l~~~~l~~l~l~~N~~~ 202 (361)
T 2xot_A 175 LKKLPLTDLQKLPAWVKNGLYLHNNPLE 202 (361)
T ss_dssp CCCCCHHHHHHSCHHHHTTEECCSSCEE
T ss_pred CCccCHHHhhhccHhhcceEEecCCCcc
Confidence 54333334444443 244444444443
No 362
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.78 E-value=4.1e-19 Score=182.67 Aligned_cols=155 Identities=21% Similarity=0.196 Sum_probs=89.9
Q ss_pred cEEEeecceecccCCCcccccCCCCEEecCCcccccccC-cccccccccceeecccccccccCCCCCCCCCCCcEEEeeC
Q 039533 321 QRLDMWNNQLSGTIPPAIGELQNLKILGLNRNKLSGNIP-PSIGNLKMLLNLFLNDNFLEVSIPSSLGQCESLIEINLSN 399 (949)
Q Consensus 321 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~ 399 (949)
+.+++++|.++ .+|..+. ..++.|+|++|+|++..| ..|.++++|+.|+|++|+|++..+..|.++++|++|+|++
T Consensus 14 ~~l~~s~n~l~-~iP~~~~--~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 90 (220)
T 2v70_A 14 TTVDCSNQKLN-KIPEHIP--QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTS 90 (220)
T ss_dssp TEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CEeEeCCCCcc-cCccCCC--CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCC
Confidence 35666666666 3454443 234566666666665433 2355555555555555555554444555555555555544
Q ss_pred ccccCCCCCcccCCcccceeeccCCCccCCCCccccccccccceeeeccccccccCCcccccccchhhcccCcccccccc
Q 039533 400 NNLSGTIPPQFFSLSSLSISLDWSRNKLTGSLPIEVGKLKILEFLYVYENRLEGEIPSTFGNCIRLEQLGMGGNLFQGPI 479 (949)
Q Consensus 400 N~l~~~~p~~~~~l~~l~~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~ 479 (949)
|+++ +..|..|..+++|++|+|++|+|++..|..|..+++|+.|+|++|+|++..
T Consensus 91 N~l~-------------------------~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 145 (220)
T 2v70_A 91 NRLE-------------------------NVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVA 145 (220)
T ss_dssp SCCC-------------------------CCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBC
T ss_pred CccC-------------------------ccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEEC
Confidence 4444 333444555666666666666666665666666666666666666666666
Q ss_pred CCCcCCCCCCCEEECCCCcCCCcC
Q 039533 480 SSSLGSLRGLRVLDLSQNNLSGEI 503 (949)
Q Consensus 480 ~~~~~~l~~L~~L~Ls~N~l~~~~ 503 (949)
|..|..+++|+.|+|++|.+++..
T Consensus 146 ~~~~~~l~~L~~L~L~~N~l~c~c 169 (220)
T 2v70_A 146 PGAFDTLHSLSTLNLLANPFNCNC 169 (220)
T ss_dssp TTTTTTCTTCCEEECCSCCEECSG
T ss_pred HHHhcCCCCCCEEEecCcCCcCCC
Confidence 666666666666666666666443
No 363
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.78 E-value=8.4e-19 Score=180.36 Aligned_cols=151 Identities=19% Similarity=0.194 Sum_probs=76.2
Q ss_pred EEEccCccccCCCCCCCCCCCcccEEEeecceecccCCCcccccCCCCEEecCCcccccccCcccccccccceeeccccc
Q 039533 298 TLFLNNNKIYGSIPAGIGNFVNLQRLDMWNNQLSGTIPPAIGELQNLKILGLNRNKLSGNIPPSIGNLKMLLNLFLNDNF 377 (949)
Q Consensus 298 ~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~ 377 (949)
.+++++|.++ .+|..+. ++|++|+|++|+|++..+..|..+++|+.|+|++|+|++..|..|.++++|++|+|++|+
T Consensus 15 ~v~c~~~~l~-~iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~ 91 (220)
T 2v9t_B 15 IVDCRGKGLT-EIPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNK 91 (220)
T ss_dssp EEECTTSCCS-SCCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSC
T ss_pred EEEcCCCCcC-cCCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCc
Confidence 3444444444 2333322 345555555555554444445555555555555555554445555555555555555555
Q ss_pred ccccCCCCCCCCCCCcEEEeeCccccCCCCCcccCCcccceeeccCCCccCCCCccccccccccceeeecccccc
Q 039533 378 LEVSIPSSLGQCESLIEINLSNNNLSGTIPPQFFSLSSLSISLDWSRNKLTGSLPIEVGKLKILEFLYVYENRLE 452 (949)
Q Consensus 378 l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~l~~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 452 (949)
|+...+..|.++++|++|+|++|+|++..|..|..+++| +.|+|++|++++..+..+..+++|+.|+|++|.+.
T Consensus 92 l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L-~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~ 165 (220)
T 2v9t_B 92 ITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNL-NLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFI 165 (220)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTC-CEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEE
T ss_pred CCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCC-CEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcC
Confidence 554444444555555555555555554444444444444 44555555555444445555666666666666665
No 364
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.78 E-value=4.8e-19 Score=197.17 Aligned_cols=178 Identities=20% Similarity=0.129 Sum_probs=155.0
Q ss_pred ccEEEccCccccCCCCCCCCCCCcccEEEeecceecccCCCccc-ccCCCCEEecCCcccccccCcccccccccceeecc
Q 039533 296 IKTLFLNNNKIYGSIPAGIGNFVNLQRLDMWNNQLSGTIPPAIG-ELQNLKILGLNRNKLSGNIPPSIGNLKMLLNLFLN 374 (949)
Q Consensus 296 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~-~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 374 (949)
-+.+++++|+++ .+|..+. +.++.|+|++|+|++..+..|. ++++|+.|+|++|+|++..+..|.++++|++|+|+
T Consensus 20 ~~~l~c~~~~l~-~iP~~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls 96 (361)
T 2xot_A 20 SNILSCSKQQLP-NVPQSLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLS 96 (361)
T ss_dssp TTEEECCSSCCS-SCCSSCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECC
T ss_pred CCEEEeCCCCcC-ccCccCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECC
Confidence 468999999998 5676554 4689999999999988888887 89999999999999998888889999999999999
Q ss_pred cccccccCCCCCCCCCCCcEEEeeCccccCCCCCcccCCcccceeeccCCCccCCCCcccc---ccccccceeeeccccc
Q 039533 375 DNFLEVSIPSSLGQCESLIEINLSNNNLSGTIPPQFFSLSSLSISLDWSRNKLTGSLPIEV---GKLKILEFLYVYENRL 451 (949)
Q Consensus 375 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~l~~~L~ls~N~l~~~~p~~~---~~l~~L~~L~Ls~N~l 451 (949)
+|+|++..+..|.++++|++|+|++|+|++..|..|..+++| +.|+|++|+|++..+..+ ..+++|+.|+|++|+|
T Consensus 97 ~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L-~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l 175 (361)
T 2xot_A 97 SNHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQL-QKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKL 175 (361)
T ss_dssp SSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTC-CEEECCSSCCCSCCGGGTC----CTTCCEEECCSSCC
T ss_pred CCcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccC-CEEECCCCcCCeeCHHHhcCcccCCcCCEEECCCCCC
Confidence 999998888899999999999999999998888899999999 789999999996555555 6799999999999999
Q ss_pred cccCCcccccccc--hhhcccCcccccc
Q 039533 452 EGEIPSTFGNCIR--LEQLGMGGNLFQG 477 (949)
Q Consensus 452 ~~~~p~~~~~l~~--L~~L~l~~N~l~~ 477 (949)
++..+..|..++. |+.|+|++|.+..
T Consensus 176 ~~l~~~~~~~l~~~~l~~l~l~~N~~~C 203 (361)
T 2xot_A 176 KKLPLTDLQKLPAWVKNGLYLHNNPLEC 203 (361)
T ss_dssp CCCCHHHHHHSCHHHHTTEECCSSCEEC
T ss_pred CccCHHHhhhccHhhcceEEecCCCccC
Confidence 9766678888887 4889999998873
No 365
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.78 E-value=6.3e-19 Score=189.74 Aligned_cols=151 Identities=25% Similarity=0.338 Sum_probs=71.4
Q ss_pred CCCCCcccEEEeecceecccCCCcccccCCCCEEecCCcccccccCcccccccccceeecccccccccCCCCCCCCCCCc
Q 039533 314 IGNFVNLQRLDMWNNQLSGTIPPAIGELQNLKILGLNRNKLSGNIPPSIGNLKMLLNLFLNDNFLEVSIPSSLGQCESLI 393 (949)
Q Consensus 314 ~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 393 (949)
+..+++|++|+|++|++++..+ +.++++|+.|+|++|++++ +| .+.++++|+.|++++|++++. ..+..+++|+
T Consensus 64 ~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~-~~-~l~~l~~L~~L~L~~n~i~~~--~~l~~l~~L~ 137 (291)
T 1h6t_A 64 IQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKD-LS-SLKDLKKLKSLSLEHNGISDI--NGLVHLPQLE 137 (291)
T ss_dssp GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-GG-GGTTCTTCCEEECTTSCCCCC--GGGGGCTTCC
T ss_pred HhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCC-Ch-hhccCCCCCEEECCCCcCCCC--hhhcCCCCCC
Confidence 3344444444444444443222 4444444444444444442 11 244444444444444444431 2344444445
Q ss_pred EEEeeCccccCCCCCcccCCcccceeeccCCCccCCCCccccccccccceeeeccccccccCCcccccccchhhcccCcc
Q 039533 394 EINLSNNNLSGTIPPQFFSLSSLSISLDWSRNKLTGSLPIEVGKLKILEFLYVYENRLEGEIPSTFGNCIRLEQLGMGGN 473 (949)
Q Consensus 394 ~L~l~~N~l~~~~p~~~~~l~~l~~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N 473 (949)
+|++++|++++. ..+..+++| +.|++++|++++..| +..+++|+.|+|++|++++ +| .+..+++|+.|++++|
T Consensus 138 ~L~l~~n~l~~~--~~l~~l~~L-~~L~L~~N~l~~~~~--l~~l~~L~~L~L~~N~i~~-l~-~l~~l~~L~~L~l~~n 210 (291)
T 1h6t_A 138 SLYLGNNKITDI--TVLSRLTKL-DTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHISD-LR-ALAGLKNLDVLELFSQ 210 (291)
T ss_dssp EEECCSSCCCCC--GGGGGCTTC-SEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCB-CG-GGTTCTTCSEEEEEEE
T ss_pred EEEccCCcCCcc--hhhccCCCC-CEEEccCCccccchh--hcCCCccCEEECCCCcCCC-Ch-hhccCCCCCEEECcCC
Confidence 555555544422 334444444 445555555553333 5555666666666666653 33 2556666666666666
Q ss_pred cccc
Q 039533 474 LFQG 477 (949)
Q Consensus 474 ~l~~ 477 (949)
+++.
T Consensus 211 ~i~~ 214 (291)
T 1h6t_A 211 ECLN 214 (291)
T ss_dssp EEEC
T ss_pred cccC
Confidence 6653
No 366
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.77 E-value=2.5e-19 Score=192.89 Aligned_cols=187 Identities=26% Similarity=0.350 Sum_probs=127.8
Q ss_pred EEEccCccccCCCCCCCCCCCcccEEEeecceecccCCCcccccCCCCEEecCCcccccccCcccccccccceeeccccc
Q 039533 298 TLFLNNNKIYGSIPAGIGNFVNLQRLDMWNNQLSGTIPPAIGELQNLKILGLNRNKLSGNIPPSIGNLKMLLNLFLNDNF 377 (949)
Q Consensus 298 ~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~ 377 (949)
.+.+..+.+++.. .+..+++|++|++++|.++. ++ .+..+++|+.|+|++|++++..+ +.++++|+.|++++|.
T Consensus 28 ~~~l~~~~~~~~~--~~~~l~~L~~L~l~~~~i~~-~~-~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~ 101 (291)
T 1h6t_A 28 KDNLKKKSVTDAV--TQNELNSIDQIIANNSDIKS-VQ-GIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENK 101 (291)
T ss_dssp HHHTTCSCTTSEE--CHHHHHTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSC
T ss_pred HHHhcCCCccccc--chhhcCcccEEEccCCCccc-Ch-hHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCc
Confidence 3445555555322 24567888899999998884 34 48889999999999999986544 8889999999999998
Q ss_pred ccccCCCCCCCCCCCcEEEeeCccccCCCCCcccCCcccceeeccCCCccCCCCccccccccccceeeeccccccccCCc
Q 039533 378 LEVSIPSSLGQCESLIEINLSNNNLSGTIPPQFFSLSSLSISLDWSRNKLTGSLPIEVGKLKILEFLYVYENRLEGEIPS 457 (949)
Q Consensus 378 l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~l~~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~ 457 (949)
+++ +| .+..+++|++|++++|++++ + +.+..+++| +.|++++|++++. ..+..+++|+.|+|++|++++..|
T Consensus 102 l~~-~~-~l~~l~~L~~L~L~~n~i~~-~-~~l~~l~~L-~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~- 173 (291)
T 1h6t_A 102 VKD-LS-SLKDLKKLKSLSLEHNGISD-I-NGLVHLPQL-ESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP- 173 (291)
T ss_dssp CCC-GG-GGTTCTTCCEEECTTSCCCC-C-GGGGGCTTC-CEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG-
T ss_pred CCC-Ch-hhccCCCCCEEECCCCcCCC-C-hhhcCCCCC-CEEEccCCcCCcc--hhhccCCCCCEEEccCCccccchh-
Confidence 875 33 38888888888888888874 3 345566666 5666666666643 456666666666666666664333
Q ss_pred ccccccchhhcccCccccccccCCCcCCCCCCCEEECCCCcCCC
Q 039533 458 TFGNCIRLEQLGMGGNLFQGPISSSLGSLRGLRVLDLSQNNLSG 501 (949)
Q Consensus 458 ~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 501 (949)
+..+++|+.|+|++|++++. + .+..+++|+.|++++|+++.
T Consensus 174 -l~~l~~L~~L~L~~N~i~~l-~-~l~~l~~L~~L~l~~n~i~~ 214 (291)
T 1h6t_A 174 -LAGLTKLQNLYLSKNHISDL-R-ALAGLKNLDVLELFSQECLN 214 (291)
T ss_dssp -GTTCTTCCEEECCSSCCCBC-G-GGTTCTTCSEEEEEEEEEEC
T ss_pred -hcCCCccCEEECCCCcCCCC-h-hhccCCCCCEEECcCCcccC
Confidence 66666666666666666642 2 35666666666666666654
No 367
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.77 E-value=1e-19 Score=220.22 Aligned_cols=190 Identities=25% Similarity=0.278 Sum_probs=110.1
Q ss_pred EeecceecccCCCcccccCCCCEEecCCcccccccCcccccccccceeecccccccccCCCCCCCCCCCcEEEeeCcccc
Q 039533 324 DMWNNQLSGTIPPAIGELQNLKILGLNRNKLSGNIPPSIGNLKMLLNLFLNDNFLEVSIPSSLGQCESLIEINLSNNNLS 403 (949)
Q Consensus 324 ~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~ 403 (949)
+++.|.+. ..|+.|..+++|+.|+|++|++. .+|..+.++++|++|+|++|.|+ .+|..|+++++|++|+|++|+|+
T Consensus 207 ~~~~n~~~-~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~ 283 (727)
T 4b8c_D 207 DDIENRMV-MPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT 283 (727)
T ss_dssp ----------------CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS
T ss_pred ccccccee-cChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC
Confidence 44455555 55677777778888888888877 66766777788888888888877 67777778888888888888887
Q ss_pred CCCCCcccCCcccceeeccCCCccCCCCccccccccccceeeeccccccccCCcccccccc-hhhcccCccccccccCCC
Q 039533 404 GTIPPQFFSLSSLSISLDWSRNKLTGSLPIEVGKLKILEFLYVYENRLEGEIPSTFGNCIR-LEQLGMGGNLFQGPISSS 482 (949)
Q Consensus 404 ~~~p~~~~~l~~l~~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~-L~~L~l~~N~l~~~~~~~ 482 (949)
.+|..|..+++| +.|+|++|.|+ .+|..|+.+++|+.|+|++|+|++.+|..+..+.. +..|+|++|.+++.+|..
T Consensus 284 -~lp~~~~~l~~L-~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~~ 360 (727)
T 4b8c_D 284 -SLPAELGSCFQL-KYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPHE 360 (727)
T ss_dssp -SCCSSGGGGTTC-SEEECCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
T ss_pred -ccChhhcCCCCC-CEEECCCCCCC-ccChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccCcCccc
Confidence 778778777777 67888888887 66777888888888888888888888887766533 345788888888887764
Q ss_pred cCCCCCCCEEECCCC--------cCCCcCcccccCCc-cceEeCCCCcCcCc
Q 039533 483 LGSLRGLRVLDLSQN--------NLSGEIPKFLAGLS-LNNLNLSYNDLEGM 525 (949)
Q Consensus 483 ~~~l~~L~~L~Ls~N--------~l~~~~p~~~~~~~-L~~l~ls~N~l~~~ 525 (949)
|+.|++++| .|.+..+..+..+. +....+++|-+.+.
T Consensus 361 ------l~~l~l~~n~~~~~~~~~l~~~~~~~~~~l~~~~~~~ls~Nil~~~ 406 (727)
T 4b8c_D 361 ------RRFIEINTDGEPQREYDSLQQSTEHLATDLAKRTFTVLSYNTLCQH 406 (727)
T ss_dssp -----------------------------------------------CCCGG
T ss_pred ------cceeEeecccccccccCCccccccchhhcccccceeeeeccccccc
Confidence 455667766 33333333333333 45556667766543
No 368
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.77 E-value=2.3e-18 Score=178.38 Aligned_cols=153 Identities=27% Similarity=0.281 Sum_probs=96.8
Q ss_pred ccEEEccCccccCCCCCCCCCCCcccEEEeecceecccCCCcccccCCCCEEecCCcccccccCcccccccccceeeccc
Q 039533 296 IKTLFLNNNKIYGSIPAGIGNFVNLQRLDMWNNQLSGTIPPAIGELQNLKILGLNRNKLSGNIPPSIGNLKMLLNLFLND 375 (949)
Q Consensus 296 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 375 (949)
.+.+++++++++ .+|..+. ++|++|+|++|+|++..|..|.++++|+.|+|++|+|++..+..|.++++|+.|+|++
T Consensus 21 ~~~v~c~~~~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~ 97 (229)
T 3e6j_A 21 GTTVDCRSKRHA-SVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGT 97 (229)
T ss_dssp TTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEeEccCCCcC-ccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCC
Confidence 345666666665 4444332 5666666666666666666666666666666666666654445566666666666666
Q ss_pred ccccccCCCCCCCCCCCcEEEeeCccccCCCCCcccCCcccceeeccCCCccCCCCccccccccccceeeeccccccc
Q 039533 376 NFLEVSIPSSLGQCESLIEINLSNNNLSGTIPPQFFSLSSLSISLDWSRNKLTGSLPIEVGKLKILEFLYVYENRLEG 453 (949)
Q Consensus 376 N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~l~~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 453 (949)
|+|++..+..|..+++|++|+|++|+|+ .+|..+..+++| +.|+|++|+|++..+..+..+++|+.|+|++|.+.+
T Consensus 98 N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L-~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c 173 (229)
T 3e6j_A 98 NQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHL-THLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDC 173 (229)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTC-SEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBCT
T ss_pred CcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCC-CEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCccC
Confidence 6666555566666777777777777776 566666666665 556666666665555556666666777777776664
No 369
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.76 E-value=2.4e-20 Score=218.78 Aligned_cols=190 Identities=19% Similarity=0.163 Sum_probs=110.7
Q ss_pred CCCCcccEEEeecceecccCCCcccccCCCCEEecCCcc-------------cccccCcccccccccceee-cccccccc
Q 039533 315 GNFVNLQRLDMWNNQLSGTIPPAIGELQNLKILGLNRNK-------------LSGNIPPSIGNLKMLLNLF-LNDNFLEV 380 (949)
Q Consensus 315 ~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~-------------l~~~~p~~~~~l~~L~~L~-L~~N~l~~ 380 (949)
...++|+.|+|++|+|+ .+|+.++++++|+.|++++|. +.+.+|..++++++|+.|+ ++.|.+.
T Consensus 346 ~~~~~L~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~~L~~L~~l~~n~~~- 423 (567)
T 1dce_A 346 ATDEQLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYLD- 423 (567)
T ss_dssp STTTTSSSCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCGGGHHHHH-
T ss_pred ccCccceeccCChhhHH-hhHHHHHHHHHHHHhccccchhhhhHHHHHHhcccccCCHHHHHHHHhcccCcchhhcccc-
Confidence 44566777777777776 567777777777777776664 4556677777777777777 5665442
Q ss_pred cCCCCCCCCCCCcEEEeeCccccCCCCCcccCCcccceeeccCCCccCCCCccccccccccceeeeccccccccCCcccc
Q 039533 381 SIPSSLGQCESLIEINLSNNNLSGTIPPQFFSLSSLSISLDWSRNKLTGSLPIEVGKLKILEFLYVYENRLEGEIPSTFG 460 (949)
Q Consensus 381 ~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~l~~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 460 (949)
+|+.+.+++|.+++..+. .+ +.|+|++|+|++ +|. ++.+++|+.|+|++|+|+ .+|..|+
T Consensus 424 ----------~L~~l~l~~n~i~~l~~~------~L-~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~ 483 (567)
T 1dce_A 424 ----------DLRSKFLLENSVLKMEYA------DV-RVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALA 483 (567)
T ss_dssp ----------HHHHHHHHHHHHHHHHHT------TC-SEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGG
T ss_pred ----------hhhhhhhhcccccccCcc------Cc-eEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhh
Confidence 344444555554421111 12 445555555553 343 555556666666666665 5555566
Q ss_pred cccchhhcccCccccccccCCCcCCCCCCCEEECCCCcCCCcC-cccccCCc-cceEeCCCCcCcCcccc
Q 039533 461 NCIRLEQLGMGGNLFQGPISSSLGSLRGLRVLDLSQNNLSGEI-PKFLAGLS-LNNLNLSYNDLEGMVTT 528 (949)
Q Consensus 461 ~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~-p~~~~~~~-L~~l~ls~N~l~~~~~~ 528 (949)
++++|+.|+|++|+|++ +| .|+.+++|+.|+|++|+|++.+ |..+..++ |+.|+|++|+|++.+|.
T Consensus 484 ~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~ 551 (567)
T 1dce_A 484 ALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGI 551 (567)
T ss_dssp GCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSC
T ss_pred cCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCccH
Confidence 66666666666666654 34 5556666666666666665554 55555544 66666666666655543
No 370
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.74 E-value=5.7e-19 Score=186.99 Aligned_cols=167 Identities=23% Similarity=0.275 Sum_probs=96.4
Q ss_pred ccEEEccCccccCCCCCCCCCCCcccEEEeecceecccCCCcccccCCCCEEecCCcccccccCcccccccccceeeccc
Q 039533 296 IKTLFLNNNKIYGSIPAGIGNFVNLQRLDMWNNQLSGTIPPAIGELQNLKILGLNRNKLSGNIPPSIGNLKMLLNLFLND 375 (949)
Q Consensus 296 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 375 (949)
+..+++++|.+++. + .+..+++|++|++++|.|+ .+| .+..+++|+.|+|++|+|++..+ +.++++|+.|+|++
T Consensus 21 l~~l~l~~~~i~~~-~-~~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L~L~~ 94 (263)
T 1xeu_A 21 AVKQNLGKQSVTDL-V-SQKELSGVQNFNGDNSNIQ-SLA-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEELSVNR 94 (263)
T ss_dssp HHHHHHTCSCTTSE-E-CHHHHTTCSEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEEECCS
T ss_pred HHHHHhcCCCcccc-c-chhhcCcCcEEECcCCCcc-cch-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEEECCC
Confidence 45555666666532 2 3555556666666666555 233 45555555666665555553322 55555555555555
Q ss_pred ccccccCCCCCCCCCCCcEEEeeCccccCCCCCcccCCcccceeeccCCCccCCCCccccccccccceeeeccccccccC
Q 039533 376 NFLEVSIPSSLGQCESLIEINLSNNNLSGTIPPQFFSLSSLSISLDWSRNKLTGSLPIEVGKLKILEFLYVYENRLEGEI 455 (949)
Q Consensus 376 N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~l~~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 455 (949)
|++++ +|.... ++|++ |++++|++++ ++ .+..+++|+.|+|++|++++.
T Consensus 95 N~l~~-l~~~~~--~~L~~-------------------------L~L~~N~l~~-~~-~l~~l~~L~~L~Ls~N~i~~~- 143 (263)
T 1xeu_A 95 NRLKN-LNGIPS--ACLSR-------------------------LFLDNNELRD-TD-SLIHLKNLEILSIRNNKLKSI- 143 (263)
T ss_dssp SCCSC-CTTCCC--SSCCE-------------------------EECCSSCCSB-SG-GGTTCTTCCEEECTTSCCCBC-
T ss_pred CccCC-cCcccc--CcccE-------------------------EEccCCccCC-Ch-hhcCcccccEEECCCCcCCCC-
Confidence 55543 222111 44444 4444444443 22 366667777777777777743
Q ss_pred CcccccccchhhcccCccccccccCCCcCCCCCCCEEECCCCcCCCc
Q 039533 456 PSTFGNCIRLEQLGMGGNLFQGPISSSLGSLRGLRVLDLSQNNLSGE 502 (949)
Q Consensus 456 p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 502 (949)
| .++.+++|+.|+|++|++++. ..+..+++|+.|+|++|++++.
T Consensus 144 ~-~l~~l~~L~~L~L~~N~i~~~--~~l~~l~~L~~L~l~~N~~~~~ 187 (263)
T 1xeu_A 144 V-MLGFLSKLEVLDLHGNEITNT--GGLTRLKKVNWIDLTGQKCVNE 187 (263)
T ss_dssp G-GGGGCTTCCEEECTTSCCCBC--TTSTTCCCCCEEEEEEEEEECC
T ss_pred h-HHccCCCCCEEECCCCcCcch--HHhccCCCCCEEeCCCCcccCC
Confidence 3 567777777777777777755 5677777788888888877755
No 371
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.74 E-value=3.9e-18 Score=179.96 Aligned_cols=140 Identities=19% Similarity=0.138 Sum_probs=107.9
Q ss_pred cCCCCCCeeeeecCceEEEEEEcCCCEE--EEEEEEecCCCc------------------------chHHHHHHHHHHHh
Q 039533 626 SGFSSANLVGVGSFGSVYKGIIDEGRTT--IAVKVFNLQHHG------------------------ASRSFIAECKALKS 679 (949)
Q Consensus 626 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~--vavK~~~~~~~~------------------------~~~~~~~E~~~l~~ 679 (949)
.-|.+.+.||+|+||.||+|.+..+|+. ||||+++..... ....+.+|+.++.+
T Consensus 47 ~~~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~ 126 (258)
T 1zth_A 47 YITAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLER 126 (258)
T ss_dssp SEEEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHH
T ss_pred CchhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHH
Confidence 3466788999999999999999557888 999997543111 01367899999999
Q ss_pred cCCCcc--eeEEeeeecccccCCccceeEeeeccC-C----ChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHH
Q 039533 680 IRHRNL--VKVLTACLGADYRGNDFKASVYEFMHY-G----SLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALN 752 (949)
Q Consensus 680 l~h~ni--v~~~~~~~~~~~~~~~~~~lv~e~~~~-g----sL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~ 752 (949)
+.|+++ +.++++ ...++||||+.+ | +|.++... .++..+..++.|++.|+.
T Consensus 127 l~~~~i~~p~~~~~---------~~~~lVmE~~g~~g~~~~~L~~~~~~-------------~~~~~~~~i~~qi~~~l~ 184 (258)
T 1zth_A 127 AKEAGVSVPQPYTY---------MKNVLLMEFIGEDELPAPTLVELGRE-------------LKELDVEGIFNDVVENVK 184 (258)
T ss_dssp HHHTTCCCCCEEEE---------ETTEEEEECCEETTEECCBHHHHGGG-------------GGGSCHHHHHHHHHHHHH
T ss_pred HHhCCCCCCeEEEc---------CCCEEEEEecCCCCCccccHHHHhhc-------------cChHHHHHHHHHHHHHHH
Confidence 988754 444432 156899999943 3 66665431 123457789999999999
Q ss_pred HHh-hCCCCCeEecCCCCCCeeecCCCceEEeecccceecC
Q 039533 753 YLH-HDCQPVTAHCDLKPSNVLLDDYMTARVGDFGLARILS 792 (949)
Q Consensus 753 ~LH-~~~~~~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~ 792 (949)
||| +. +|+||||||+|||+++ .++|+|||+|....
T Consensus 185 ~lH~~~---givHrDlkp~NILl~~--~~~liDFG~a~~~~ 220 (258)
T 1zth_A 185 RLYQEA---ELVHADLSEYNIMYID--KVYFIDMGQAVTLR 220 (258)
T ss_dssp HHHHTS---CEECSSCSTTSEEESS--SEEECCCTTCEETT
T ss_pred HHHHHC---CEEeCCCCHHHEEEcC--cEEEEECcccccCC
Confidence 999 77 9999999999999998 99999999998653
No 372
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.74 E-value=2.1e-18 Score=182.61 Aligned_cols=82 Identities=21% Similarity=0.204 Sum_probs=42.8
Q ss_pred CCCCCceeeccCceeccccCCcccCcccCcEEeeccccccCcCCCCCCCCccceeecCCCccccccccccccCCCCCcEE
Q 039533 87 NLSFLKQLYLQVNSFTHEIPSEIGGLRRLKVLALNNNSICGEIPTNISRCSTLIPIHPQNNQLVGKILSRFSSLSKTEIL 166 (949)
Q Consensus 87 ~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~L~~L~~L 166 (949)
++.++..++|+.|.+++. + .+..+++|++|+|++|.++ .+| .++.+++|++|++++|+|++..+ |..+++|++|
T Consensus 17 ~l~~l~~l~l~~~~i~~~-~-~~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L 90 (263)
T 1xeu_A 17 GLANAVKQNLGKQSVTDL-V-SQKELSGVQNFNGDNSNIQ-SLA-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEEL 90 (263)
T ss_dssp HHHHHHHHHHTCSCTTSE-E-CHHHHTTCSEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEE
T ss_pred HHHHHHHHHhcCCCcccc-c-chhhcCcCcEEECcCCCcc-cch-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEE
Confidence 344555566666666532 2 4556666666666666665 344 45555555555555555444333 4444444444
Q ss_pred ECCCCCCC
Q 039533 167 NLGSNHLT 174 (949)
Q Consensus 167 ~Ls~N~l~ 174 (949)
+|++|+++
T Consensus 91 ~L~~N~l~ 98 (263)
T 1xeu_A 91 SVNRNRLK 98 (263)
T ss_dssp ECCSSCCS
T ss_pred ECCCCccC
Confidence 44444444
No 373
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.73 E-value=3.8e-18 Score=172.42 Aligned_cols=154 Identities=15% Similarity=0.140 Sum_probs=98.0
Q ss_pred CCCCCcccEEEeecceecccCCCcccccCCCCEEecCCcccccccCcccccccccceeecccccccccCCCCCCCCCCCc
Q 039533 314 IGNFVNLQRLDMWNNQLSGTIPPAIGELQNLKILGLNRNKLSGNIPPSIGNLKMLLNLFLNDNFLEVSIPSSLGQCESLI 393 (949)
Q Consensus 314 ~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 393 (949)
.+.+++|++|++++|.++ .+| .+..+++|++|++++|.++ .+..+..+++|++|++++|.+++..|..|..+++|+
T Consensus 40 ~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~--~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~ 115 (197)
T 4ezg_A 40 EAQMNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHAT--NYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLT 115 (197)
T ss_dssp HHHHHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCS--CCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCC
T ss_pred hhhcCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCC--cchhhhcCCCCCEEEeECCccCcccChhhcCCCCCC
Confidence 466778888888888887 555 5778888888888888665 234567777777777777777766666677777777
Q ss_pred EEEeeCccccCCCCCcccCCcccceeeccCCCccCCCCccccccccccceeeecccc-ccccCCcccccccchhhcccCc
Q 039533 394 EINLSNNNLSGTIPPQFFSLSSLSISLDWSRNKLTGSLPIEVGKLKILEFLYVYENR-LEGEIPSTFGNCIRLEQLGMGG 472 (949)
Q Consensus 394 ~L~l~~N~l~~~~p~~~~~l~~l~~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~l~~L~~L~l~~ 472 (949)
+|++++|++++.. |..++.+++|++|++++|+ ++ .+| .+..+++|+.|++++
T Consensus 116 ~L~Ls~n~i~~~~-------------------------~~~l~~l~~L~~L~L~~n~~i~-~~~-~l~~l~~L~~L~l~~ 168 (197)
T 4ezg_A 116 LLDISHSAHDDSI-------------------------LTKINTLPKVNSIDLSYNGAIT-DIM-PLKTLPELKSLNIQF 168 (197)
T ss_dssp EEECCSSBCBGGG-------------------------HHHHTTCSSCCEEECCSCTBCC-CCG-GGGGCSSCCEEECTT
T ss_pred EEEecCCccCcHh-------------------------HHHHhhCCCCCEEEccCCCCcc-ccH-hhcCCCCCCEEECCC
Confidence 7766666666433 4444455555555555555 33 333 455555666666666
Q ss_pred cccccccCCCcCCCCCCCEEECCCCcCC
Q 039533 473 NLFQGPISSSLGSLRGLRVLDLSQNNLS 500 (949)
Q Consensus 473 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 500 (949)
|++++ ++ .+..+++|+.|++++|++.
T Consensus 169 n~i~~-~~-~l~~l~~L~~L~l~~N~i~ 194 (197)
T 4ezg_A 169 DGVHD-YR-GIEDFPKLNQLYAFSQTIG 194 (197)
T ss_dssp BCCCC-CT-TGGGCSSCCEEEECBC---
T ss_pred CCCcC-hH-HhccCCCCCEEEeeCcccC
Confidence 66554 22 5556666666666666654
No 374
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.73 E-value=9e-18 Score=168.69 Aligned_cols=130 Identities=24% Similarity=0.302 Sum_probs=70.2
Q ss_pred EEEeeCccccCCCCCcccCCcccceeeccCCCccCCCCcc-ccccccccceeeeccccccccCCcccccccchhhcccCc
Q 039533 394 EINLSNNNLSGTIPPQFFSLSSLSISLDWSRNKLTGSLPI-EVGKLKILEFLYVYENRLEGEIPSTFGNCIRLEQLGMGG 472 (949)
Q Consensus 394 ~L~l~~N~l~~~~p~~~~~l~~l~~~L~ls~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~ 472 (949)
.+++++|+++ .+|..+.. .+ +.|++++|++++..+. .++.+++|++|+|++|+|++..|..|.++++|+.|+|++
T Consensus 12 ~l~~s~~~l~-~ip~~~~~--~l-~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 12 TVDCTGRGLK-EIPRDIPL--HT-TELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp EEECTTSCCS-SCCSCCCT--TC-SEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred EEEcCCCCcC-cCccCCCC--CC-CEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 4444444443 34443322 22 3445555555433332 255555555666666666555555565666666666666
Q ss_pred cccccccCCCcCCCCCCCEEECCCCcCCCcCcccccCCc-cceEeCCCCcCcCccc
Q 039533 473 NLFQGPISSSLGSLRGLRVLDLSQNNLSGEIPKFLAGLS-LNNLNLSYNDLEGMVT 527 (949)
Q Consensus 473 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~-L~~l~ls~N~l~~~~~ 527 (949)
|+|++..+..|..+++|+.|+|++|+|++.+|..+..++ |++|+|++|++++..+
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 143 (192)
T 1w8a_A 88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCH 143 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGG
T ss_pred CcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCc
Confidence 666655555566666666666666666655555555554 6666666666665544
No 375
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.72 E-value=1.2e-17 Score=168.59 Aligned_cols=149 Identities=18% Similarity=0.275 Sum_probs=107.0
Q ss_pred cEEEEEcCCCCCCccccCCCCCCCCCceeeccCceeccccCCcccCcccCcEEeeccccccCcCCCCCCCCccceeecCC
Q 039533 66 RVTLLDLRSLKLAGSVSHFIGNLSFLKQLYLQVNSFTHEIPSEIGGLRRLKVLALNNNSICGEIPTNISRCSTLIPIHPQ 145 (949)
Q Consensus 66 ~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~ 145 (949)
+++.|++++++++ .++ .+..+++|++|+|++|.++ .+..+..+++|++|+|++|.+++..|..|+.+++|++|+++
T Consensus 45 ~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~--~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls 120 (197)
T 4ezg_A 45 SLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHAT--NYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDIS 120 (197)
T ss_dssp TCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCS--CCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEEECC
T ss_pred CccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCC--cchhhhcCCCCCEEEeECCccCcccChhhcCCCCCCEEEec
Confidence 4667777777777 444 5777788888888877554 33467777888888888888877777777778888888888
Q ss_pred CccccccccccccCCCCCcEEECCCCC-CCCCCCCCcCCCCCccEEeccccccCCCCCCcccCCCccccccccCcccc
Q 039533 146 NNQLVGKILSRFSSLSKTEILNLGSNH-LTGSIPSSLGNLSSIHTISLAYNNLDGTIPNSFGWFENLVFLSLAANNLS 222 (949)
Q Consensus 146 ~n~l~~~~~~~~~~L~~L~~L~Ls~N~-l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 222 (949)
+|++++..+..|..+++|++|+|++|. ++ .+| .+..+++|++|+|++|++++ ++ .+..+++|++|++++|+|.
T Consensus 121 ~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~-~~~-~l~~l~~L~~L~l~~n~i~~-~~-~l~~l~~L~~L~l~~N~i~ 194 (197)
T 4ezg_A 121 HSAHDDSILTKINTLPKVNSIDLSYNGAIT-DIM-PLKTLPELKSLNIQFDGVHD-YR-GIEDFPKLNQLYAFSQTIG 194 (197)
T ss_dssp SSBCBGGGHHHHTTCSSCCEEECCSCTBCC-CCG-GGGGCSSCCEEECTTBCCCC-CT-TGGGCSSCCEEEECBC---
T ss_pred CCccCcHhHHHHhhCCCCCEEEccCCCCcc-ccH-hhcCCCCCCEEECCCCCCcC-hH-HhccCCCCCEEEeeCcccC
Confidence 887777777777777778888888777 54 444 57777777777777777774 33 5677777777777777654
No 376
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.72 E-value=6.8e-18 Score=185.41 Aligned_cols=301 Identities=11% Similarity=0.051 Sum_probs=165.8
Q ss_pred CccccCCCCC--CCCCceeeccCceeccccCCcccC-cccCcEEeecccccc--CcCCCCCCCCccceeecCCCcccccc
Q 039533 78 AGSVSHFIGN--LSFLKQLYLQVNSFTHEIPSEIGG-LRRLKVLALNNNSIC--GEIPTNISRCSTLIPIHPQNNQLVGK 152 (949)
Q Consensus 78 ~g~~~~~l~~--l~~L~~L~L~~n~l~~~~p~~~~~-l~~L~~L~Ls~N~l~--~~~p~~~~~l~~L~~L~l~~n~l~~~ 152 (949)
.|.++..+.. +.+++.|.++++ +.+.--..+.. +++|++|||++|+|. ...+.. ++.+..+.+..|. +
T Consensus 12 ~g~l~~~l~~~~~~~l~~L~l~g~-i~~~~~~~l~~~l~~L~~LdLs~n~i~~~~~~~~~---~~~~~~~~~~~~~---I 84 (329)
T 3sb4_A 12 PGTLISMMTEEEANSITHLTLTGK-LNAEDFRHLRDEFPSLKVLDISNAEIKMYSGKAGT---YPNGKFYIYMANF---V 84 (329)
T ss_dssp TTCGGGGSCHHHHHHCSEEEEEEE-ECHHHHHHHHHSCTTCCEEEEEEEEECCEEESSSS---SGGGCCEEECTTE---E
T ss_pred CCcHHhhccchhhCceeEEEEecc-ccHHHHHHHHHhhccCeEEecCcceeEEecCcccc---ccccccccccccc---c
Confidence 4455555554 777888888764 22211123333 788999999999887 222222 2224444445553 3
Q ss_pred ccccccC--------CCCCcEEECCCCCCCCCCCCCcCCCCCccEEeccccccCCCCCCcccCCCccccccccCcccccc
Q 039533 153 ILSRFSS--------LSKTEILNLGSNHLTGSIPSSLGNLSSIHTISLAYNNLDGTIPNSFGWFENLVFLSLAANNLSVV 224 (949)
Q Consensus 153 ~~~~~~~--------L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 224 (949)
...+|.+ +++|+.|+|.+ .++...+.+|.++++|+.|+|++|.++...+.+|.+..++.++.+..+....-
T Consensus 85 ~~~aF~~~~~~~~~g~~~L~~l~L~~-~i~~I~~~aF~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~ 163 (329)
T 3sb4_A 85 PAYAFSNVVNGVTKGKQTLEKVILSE-KIKNIEDAAFKGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRF 163 (329)
T ss_dssp CTTTTEEEETTEEEECTTCCC-CBCT-TCCEECTTTTTTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHT
T ss_pred CHHHhcccccccccccCCCcEEECCc-cccchhHHHhhcCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhhhc
Confidence 4556666 88888888888 77756667788888888888888888877777888877777776655321100
Q ss_pred cccccCCCCChhhhcccc-ccccccCCCCCCCCCCcchhccccccCcccEEEccCCCCCccCCchhhcccccccEEEccC
Q 039533 225 ENKLTGEVPSLEKLQRLQ-HFTITSNSLGSGGNDDLSFLCSLTNATRLTWMHINSNNFGGLLPGCISNLSKTIKTLFLNN 303 (949)
Q Consensus 225 ~~~l~~~~~~l~~l~~L~-~L~l~~N~l~~~~~~~~~~~~~l~~~~~L~~L~L~~N~l~~~~p~~~~~l~~~L~~L~L~~ 303 (949)
...+. -..+..+..|+ .+.+.... .. .-..........+++.+.+.++-.. .....+.....+|+.|+|++
T Consensus 164 ~~~i~--~~~f~~~~~L~~~i~~~~~~--~l---~~~~~~~~~~~~~~~~l~~~~~l~~-~~~~~l~~~~~~L~~l~L~~ 235 (329)
T 3sb4_A 164 KNRWE--HFAFIEGEPLETTIQVGAMG--KL---EDEIMKAGLQPRDINFLTIEGKLDN-ADFKLIRDYMPNLVSLDISK 235 (329)
T ss_dssp STTTT--TSCEEESCCCEEEEEECTTC--CH---HHHHHHTTCCGGGCSEEEEEECCCH-HHHHHHHHHCTTCCEEECTT
T ss_pred ccccc--ccccccccccceeEEecCCC--cH---HHHHhhcccCccccceEEEeeeecH-HHHHHHHHhcCCCeEEECCC
Confidence 00000 00011111222 11111000 00 0000000112333444444433111 11111112124566777776
Q ss_pred ccccCCCCCCCCCCCcccEEEeecceecccCCCcccccCCCC-EEecCCcccccccCcccccccccceeecccccccccC
Q 039533 304 NKIYGSIPAGIGNFVNLQRLDMWNNQLSGTIPPAIGELQNLK-ILGLNRNKLSGNIPPSIGNLKMLLNLFLNDNFLEVSI 382 (949)
Q Consensus 304 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~-~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 382 (949)
|+++.+.+..|.++++|+.|+|.+| ++.+.+.+|.++.+|+ .+++.+ .++.+.+.+|.++++|+.+++++|.++...
T Consensus 236 n~i~~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i~~I~ 313 (329)
T 3sb4_A 236 TNATTIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYVLATGDKITTLG 313 (329)
T ss_dssp BCCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEEEECSSCCCEEC
T ss_pred CCcceecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEEEeCCCccCccc
Confidence 6666555556666667777777666 5555556666676676 677666 555455566666667777776666666666
Q ss_pred CCCCCCCCCCcEEE
Q 039533 383 PSSLGQCESLIEIN 396 (949)
Q Consensus 383 p~~~~~l~~L~~L~ 396 (949)
+.+|.++++|+.|+
T Consensus 314 ~~aF~~~~~L~~ly 327 (329)
T 3sb4_A 314 DELFGNGVPSKLIY 327 (329)
T ss_dssp TTTTCTTCCCCEEE
T ss_pred hhhhcCCcchhhhc
Confidence 66666666666665
No 377
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.70 E-value=3.3e-17 Score=164.59 Aligned_cols=131 Identities=23% Similarity=0.265 Sum_probs=93.9
Q ss_pred eeecccccccccCCCCCCCCCCCcEEEeeCccccCCCCC-cccCCcccceeeccCCCccCCCCccccccccccceeeecc
Q 039533 370 NLFLNDNFLEVSIPSSLGQCESLIEINLSNNNLSGTIPP-QFFSLSSLSISLDWSRNKLTGSLPIEVGKLKILEFLYVYE 448 (949)
Q Consensus 370 ~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~-~~~~l~~l~~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 448 (949)
.+++++|.++ .+|..+.. +|++|++++|++++..+. .|..+++| +.|+|++|+|++..|..|.++++|++|+|++
T Consensus 12 ~l~~s~~~l~-~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L-~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 12 TVDCTGRGLK-EIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHL-VKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp EEECTTSCCS-SCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTC-CEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred EEEcCCCCcC-cCccCCCC--CCCEEECCCCcCCccCCccccccCCCC-CEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 3444444443 33333322 555666666666543333 25555555 5666666666666677777888888888888
Q ss_pred ccccccCCcccccccchhhcccCccccccccCCCcCCCCCCCEEECCCCcCCCcCc
Q 039533 449 NRLEGEIPSTFGNCIRLEQLGMGGNLFQGPISSSLGSLRGLRVLDLSQNNLSGEIP 504 (949)
Q Consensus 449 N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p 504 (949)
|+|++..|..|.++++|+.|+|++|+|++.+|..|..+++|+.|+|++|.+++..+
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 143 (192)
T 1w8a_A 88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCH 143 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGG
T ss_pred CcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCc
Confidence 88888888888888999999999999998889999999999999999999997765
No 378
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.68 E-value=4.6e-17 Score=159.83 Aligned_cols=137 Identities=17% Similarity=0.194 Sum_probs=113.9
Q ss_pred CCCCCceeeccCceec-cccCCcccCcccCcEEeeccccccCcCCCCCCCCccceeecCCCccccccccccccCCCCCcE
Q 039533 87 NLSFLKQLYLQVNSFT-HEIPSEIGGLRRLKVLALNNNSICGEIPTNISRCSTLIPIHPQNNQLVGKILSRFSSLSKTEI 165 (949)
Q Consensus 87 ~l~~L~~L~L~~n~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~L~~L~~ 165 (949)
..++|++|+|++|.++ +.+|..+..+++|++|+|++|.+++. ..++.+++|++|++++|++++.++..+..+++|++
T Consensus 22 ~~~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 99 (168)
T 2ell_A 22 TPAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTH 99 (168)
T ss_dssp CTTSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCE
T ss_pred CcccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCE
Confidence 3477888888888887 77888888888999999999988854 77888888888888888888877888888999999
Q ss_pred EECCCCCCCCCC-CCCcCCCCCccEEeccccccCCCCC---CcccCCCccccccccCccccccc
Q 039533 166 LNLGSNHLTGSI-PSSLGNLSSIHTISLAYNNLDGTIP---NSFGWFENLVFLSLAANNLSVVE 225 (949)
Q Consensus 166 L~Ls~N~l~~~~-p~~~~~l~~L~~L~L~~N~l~~~~p---~~~~~l~~L~~L~Ls~N~l~~~~ 225 (949)
|+|++|.|++.. +..+..+++|++|+|++|.+++..+ ..|..+++|++|++++|.+..++
T Consensus 100 L~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~ 163 (168)
T 2ell_A 100 LNLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQEAP 163 (168)
T ss_dssp EECBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSCBCC
T ss_pred EeccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChhhcc
Confidence 999999998542 2678889999999999999986555 47888999999999988877654
No 379
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.66 E-value=3.2e-16 Score=155.26 Aligned_cols=134 Identities=23% Similarity=0.241 Sum_probs=92.9
Q ss_pred cceeeeeEEeCCCCcEEEEEcCCCCCCccccCCCCCCCCCceeeccCceeccccCCcccCcccCcEEeeccccccCcCCC
Q 039533 52 FCKWYGVTCSRRHQRVTLLDLRSLKLAGSVSHFIGNLSFLKQLYLQVNSFTHEIPSEIGGLRRLKVLALNNNSICGEIPT 131 (949)
Q Consensus 52 ~C~w~gv~C~~~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~ 131 (949)
.|+|.+|.|+.. +++ .+|..+ .++|++|+|++|++++..+..|+++++|++|+|++|+|++..+.
T Consensus 6 ~C~~~~l~~~~~------------~l~-~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~ 70 (177)
T 2o6r_A 6 SCSGTEIRCNSK------------GLT-SVPTGI--PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDG 70 (177)
T ss_dssp EEETTEEECCSS------------CCS-SCCTTC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTT
T ss_pred EeCCCEEEecCC------------CCc-cCCCCC--CCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChh
Confidence 478888888643 333 334333 36888999999988876666788888888898888888865555
Q ss_pred CCCCCccceeecCCCccccccccccccCCCCCcEEECCCCCCCCCCCCCcCCCCCccEEeccccccCCC
Q 039533 132 NISRCSTLIPIHPQNNQLVGKILSRFSSLSKTEILNLGSNHLTGSIPSSLGNLSSIHTISLAYNNLDGT 200 (949)
Q Consensus 132 ~~~~l~~L~~L~l~~n~l~~~~~~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 200 (949)
.|+++++|++|++++|+|++..+..|..+++|++|+|++|.|++..+..+..+++|++|+|++|.+++.
T Consensus 71 ~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~ 139 (177)
T 2o6r_A 71 VFDKLTKLTILYLHENKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCS 139 (177)
T ss_dssp TTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCC
T ss_pred HccCCCccCEEECCCCCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeecc
Confidence 667777777777777777666666666666666666666666654444556666666666666666543
No 380
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.65 E-value=7.7e-17 Score=154.75 Aligned_cols=129 Identities=17% Similarity=0.207 Sum_probs=105.3
Q ss_pred CCCCCceeeccCceec-cccCCcccCcccCcEEeeccccccCcCCCCCCCCccceeecCCCccccccccccccCCCCCcE
Q 039533 87 NLSFLKQLYLQVNSFT-HEIPSEIGGLRRLKVLALNNNSICGEIPTNISRCSTLIPIHPQNNQLVGKILSRFSSLSKTEI 165 (949)
Q Consensus 87 ~l~~L~~L~L~~n~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~L~~L~~ 165 (949)
..++|+.|++++|.++ +.+|..++.+++|++|+|++|.+++. ..++++++|++|++++|.+++.++..+..+++|++
T Consensus 15 ~~~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~ 92 (149)
T 2je0_A 15 TPSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTH 92 (149)
T ss_dssp CGGGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCE
T ss_pred CCccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCE
Confidence 3467888888888888 78888888888888888888888855 77888888888888888888877788888888888
Q ss_pred EECCCCCCCCC-CCCCcCCCCCccEEeccccccCCCCC---CcccCCCcccccccc
Q 039533 166 LNLGSNHLTGS-IPSSLGNLSSIHTISLAYNNLDGTIP---NSFGWFENLVFLSLA 217 (949)
Q Consensus 166 L~Ls~N~l~~~-~p~~~~~l~~L~~L~L~~N~l~~~~p---~~~~~l~~L~~L~Ls 217 (949)
|+|++|.+++. .+..++.+++|++|++++|++++..+ ..++.+++|++|+++
T Consensus 93 L~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~ 148 (149)
T 2je0_A 93 LNLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGY 148 (149)
T ss_dssp EECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTB
T ss_pred EECCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCC
Confidence 88888888863 34778888888888888888886655 467888888888876
No 381
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.65 E-value=3.7e-16 Score=156.83 Aligned_cols=125 Identities=22% Similarity=0.314 Sum_probs=78.4
Q ss_pred EEcCCCCCCccccCCCCCCCCCceeeccCceeccccCCcccCcccCcEEeeccccccCcCCCCCCCCccceeecCCCccc
Q 039533 70 LDLRSLKLAGSVSHFIGNLSFLKQLYLQVNSFTHEIPSEIGGLRRLKVLALNNNSICGEIPTNISRCSTLIPIHPQNNQL 149 (949)
Q Consensus 70 l~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~l 149 (949)
+++++++++ .+|..+. ++|++|+|++|+|+ .+|..|.++++|++|+|++|.|++..|..|.++++|++|+|++|+|
T Consensus 15 l~~~~~~l~-~ip~~~~--~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~l 90 (193)
T 2wfh_A 15 VRCSNKGLK-VLPKGIP--RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRL 90 (193)
T ss_dssp EECTTSCCS-SCCSCCC--TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCC
T ss_pred EEcCCCCCC-cCCCCCC--CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCcc
Confidence 455566665 4555443 57777888888776 6677777777777777777777766566666666666666666665
Q ss_pred cccccccccCCCCCcEEECCCCCCCCCCCCCcCCCCCccEEeccccccC
Q 039533 150 VGKILSRFSSLSKTEILNLGSNHLTGSIPSSLGNLSSIHTISLAYNNLD 198 (949)
Q Consensus 150 ~~~~~~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 198 (949)
++..+..|.++++|++|+|++|.|++..+..|..+++|++|+|++|.+.
T Consensus 91 ~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~ 139 (193)
T 2wfh_A 91 RCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLY 139 (193)
T ss_dssp CBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEE
T ss_pred CEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCee
Confidence 5555555555555555555555555443444555555555555555544
No 382
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.63 E-value=5.6e-16 Score=155.50 Aligned_cols=129 Identities=24% Similarity=0.286 Sum_probs=87.3
Q ss_pred cEEEeeCccccCCCCCcccCCcccceeeccCCCccCCCCccccccccccceeeeccccccccCCcccccccchhhcccCc
Q 039533 393 IEINLSNNNLSGTIPPQFFSLSSLSISLDWSRNKLTGSLPIEVGKLKILEFLYVYENRLEGEIPSTFGNCIRLEQLGMGG 472 (949)
Q Consensus 393 ~~L~l~~N~l~~~~p~~~~~l~~l~~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~ 472 (949)
+.+++++|+++ .+|..+. ..+ +.|++++|+++ .+|..+..+++|+.|+|++|+|++..+..|.++++|+.|+|++
T Consensus 13 ~~l~~~~~~l~-~ip~~~~--~~l-~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~ 87 (193)
T 2wfh_A 13 TVVRCSNKGLK-VLPKGIP--RDV-TELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSY 87 (193)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTC-CEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CEEEcCCCCCC-cCCCCCC--CCC-CEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCC
Confidence 34555555555 4454432 233 45666666665 5556677777777777777777766666777777777777777
Q ss_pred cccccccCCCcCCCCCCCEEECCCCcCCCcCcccccCCc-cceEeCCCCcCcCcc
Q 039533 473 NLFQGPISSSLGSLRGLRVLDLSQNNLSGEIPKFLAGLS-LNNLNLSYNDLEGMV 526 (949)
Q Consensus 473 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~-L~~l~ls~N~l~~~~ 526 (949)
|+|++..|..|..+++|+.|+|++|+|++..+..+..++ |+.|+|++|++.+..
T Consensus 88 N~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C~c 142 (193)
T 2wfh_A 88 NRLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCDC 142 (193)
T ss_dssp SCCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEECSG
T ss_pred CccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeecCC
Confidence 777777777777777777777777777766665666555 777888888776643
No 383
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.63 E-value=5.5e-16 Score=152.13 Aligned_cols=108 Identities=25% Similarity=0.208 Sum_probs=49.6
Q ss_pred CCCCEEecCCcccc-cccCcccccccccceeecccccccccCCCCCCCCCCCcEEEeeCccccCCCCCcccCCcccceee
Q 039533 342 QNLKILGLNRNKLS-GNIPPSIGNLKMLLNLFLNDNFLEVSIPSSLGQCESLIEINLSNNNLSGTIPPQFFSLSSLSISL 420 (949)
Q Consensus 342 ~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~l~~~L 420 (949)
++|+.|+|++|+++ +.+|..+..+++|+.|++++|.+++. ..+..+++|++|++++|++++.+|..+..+++| +.|
T Consensus 24 ~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L-~~L 100 (168)
T 2ell_A 24 AAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNL-THL 100 (168)
T ss_dssp TSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTC-CEE
T ss_pred ccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCC-CEE
Confidence 34455555555544 34444444555555555555554433 445555556666665555554333333333333 333
Q ss_pred ccCCCccCCCC-ccccccccccceeeecccccc
Q 039533 421 DWSRNKLTGSL-PIEVGKLKILEFLYVYENRLE 452 (949)
Q Consensus 421 ~ls~N~l~~~~-p~~~~~l~~L~~L~Ls~N~l~ 452 (949)
++++|++++.. +..+..+++|+.|++++|+++
T Consensus 101 ~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~ 133 (168)
T 2ell_A 101 NLSGNKLKDISTLEPLKKLECLKSLDLFNCEVT 133 (168)
T ss_dssp ECBSSSCCSSGGGGGGSSCSCCCEEECCSSGGG
T ss_pred eccCCccCcchhHHHHhcCCCCCEEEeeCCcCc
Confidence 33333333211 133444444444444444444
No 384
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.63 E-value=2.1e-15 Score=165.50 Aligned_cols=285 Identities=14% Similarity=0.063 Sum_probs=202.0
Q ss_pred cEEEEEcCCCCCCccccCCCCC-CCCCceeeccCceec--cccCCcccCcccCcEEeeccccccCcCCCCCCC-------
Q 039533 66 RVTLLDLRSLKLAGSVSHFIGN-LSFLKQLYLQVNSFT--HEIPSEIGGLRRLKVLALNNNSICGEIPTNISR------- 135 (949)
Q Consensus 66 ~v~~l~l~~~~l~g~~~~~l~~-l~~L~~L~L~~n~l~--~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~------- 135 (949)
+++.|+++++ +.+.--..+.. +++|+.|||++|++. ...+.. ++.++.+.+..|.|. +..|.+
T Consensus 26 ~l~~L~l~g~-i~~~~~~~l~~~l~~L~~LdLs~n~i~~~~~~~~~---~~~~~~~~~~~~~I~---~~aF~~~~~~~~~ 98 (329)
T 3sb4_A 26 SITHLTLTGK-LNAEDFRHLRDEFPSLKVLDISNAEIKMYSGKAGT---YPNGKFYIYMANFVP---AYAFSNVVNGVTK 98 (329)
T ss_dssp HCSEEEEEEE-ECHHHHHHHHHSCTTCCEEEEEEEEECCEEESSSS---SGGGCCEEECTTEEC---TTTTEEEETTEEE
T ss_pred ceeEEEEecc-ccHHHHHHHHHhhccCeEEecCcceeEEecCcccc---ccccccccccccccC---HHHhccccccccc
Confidence 3556666542 11111112333 889999999999998 333323 333677777777443 345667
Q ss_pred -CccceeecCCCccccccccccccCCCCCcEEECCCCCCCCCCCCCcCCCCCccEEeccccc----cCCCCCCcccCCCc
Q 039533 136 -CSTLIPIHPQNNQLVGKILSRFSSLSKTEILNLGSNHLTGSIPSSLGNLSSIHTISLAYNN----LDGTIPNSFGWFEN 210 (949)
Q Consensus 136 -l~~L~~L~l~~n~l~~~~~~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~----l~~~~p~~~~~l~~ 210 (949)
|++|+.|+|.+ .++.+...+|.++++|+.|+|++|.++...+..|.++.++..+.+..+. .......+|.++.+
T Consensus 99 g~~~L~~l~L~~-~i~~I~~~aF~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~~~~ 177 (329)
T 3sb4_A 99 GKQTLEKVILSE-KIKNIEDAAFKGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIEGEP 177 (329)
T ss_dssp ECTTCCC-CBCT-TCCEECTTTTTTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEESCC
T ss_pred ccCCCcEEECCc-cccchhHHHhhcCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhhhccccccccccccccc
Confidence 99999999999 9999999999999999999999999987777899998888888877643 33344556777777
Q ss_pred cc-cccccCcccccccccccCCCCChhhhccccccccccCCCCCCCCCCcchhccc-cccCcccEEEccCCCCCccCCch
Q 039533 211 LV-FLSLAANNLSVVENKLTGEVPSLEKLQRLQHFTITSNSLGSGGNDDLSFLCSL-TNATRLTWMHINSNNFGGLLPGC 288 (949)
Q Consensus 211 L~-~L~Ls~N~l~~~~~~l~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l-~~~~~L~~L~L~~N~l~~~~p~~ 288 (949)
|+ .+.+.... .++..+.. ......++..+.+.++-.. .. ...+ ..+++|+.+++++|+++...+.+
T Consensus 178 L~~~i~~~~~~--~l~~~~~~---~~~~~~~~~~l~~~~~l~~------~~-~~~l~~~~~~L~~l~L~~n~i~~I~~~a 245 (329)
T 3sb4_A 178 LETTIQVGAMG--KLEDEIMK---AGLQPRDINFLTIEGKLDN------AD-FKLIRDYMPNLVSLDISKTNATTIPDFT 245 (329)
T ss_dssp CEEEEEECTTC--CHHHHHHH---TTCCGGGCSEEEEEECCCH------HH-HHHHHHHCTTCCEEECTTBCCCEECTTT
T ss_pred cceeEEecCCC--cHHHHHhh---cccCccccceEEEeeeecH------HH-HHHHHHhcCCCeEEECCCCCcceecHhh
Confidence 76 44443211 11110000 0011334444444433110 00 0111 23688999999999999887778
Q ss_pred hhcccccccEEEccCccccCCCCCCCCCCCccc-EEEeecceecccCCCcccccCCCCEEecCCcccccccCcccccccc
Q 039533 289 ISNLSKTIKTLFLNNNKIYGSIPAGIGNFVNLQ-RLDMWNNQLSGTIPPAIGELQNLKILGLNRNKLSGNIPPSIGNLKM 367 (949)
Q Consensus 289 ~~~l~~~L~~L~L~~N~l~~~~~~~~~~l~~L~-~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 367 (949)
|.++ .+|+.|+|.+| ++.+.+.+|.++++|+ .+++.+ +++.+.+.+|.++++|+.|++++|+++...+.+|.++++
T Consensus 246 F~~~-~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i~~I~~~aF~~~~~ 322 (329)
T 3sb4_A 246 FAQK-KYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYVLATGDKITTLGDELFGNGVP 322 (329)
T ss_dssp TTTC-TTCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEEEECSSCCCEECTTTTCTTCC
T ss_pred hhCC-CCCCEEECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEEEeCCCccCccchhhhcCCcc
Confidence 8887 46999999998 8877788899999999 999999 787677899999999999999999999888889999999
Q ss_pred cceeec
Q 039533 368 LLNLFL 373 (949)
Q Consensus 368 L~~L~L 373 (949)
|+.++.
T Consensus 323 L~~ly~ 328 (329)
T 3sb4_A 323 SKLIYK 328 (329)
T ss_dssp CCEEEC
T ss_pred hhhhcc
Confidence 999874
No 385
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.61 E-value=2.7e-15 Score=148.53 Aligned_cols=129 Identities=19% Similarity=0.223 Sum_probs=114.2
Q ss_pred CceeeccCceeccccCCcccCcccCcEEeeccccccCcCCCCCCCCccceeecCCCccccccccccccCCCCCcEEECCC
Q 039533 91 LKQLYLQVNSFTHEIPSEIGGLRRLKVLALNNNSICGEIPTNISRCSTLIPIHPQNNQLVGKILSRFSSLSKTEILNLGS 170 (949)
Q Consensus 91 L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~L~~L~~L~Ls~ 170 (949)
.+.+++++|+++ .+|..+ .++|++|+|++|++++..+..|+++++|++|++++|++++..+..|..+++|++|+|++
T Consensus 9 ~~~l~~~~~~l~-~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 85 (177)
T 2o6r_A 9 GTEIRCNSKGLT-SVPTGI--PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHE 85 (177)
T ss_dssp TTEEECCSSCCS-SCCTTC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEecCCCCc-cCCCCC--CCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCC
Confidence 468899999998 567554 37999999999999977677789999999999999999988888899999999999999
Q ss_pred CCCCCCCCCCcCCCCCccEEeccccccCCCCCCcccCCCccccccccCcccc
Q 039533 171 NHLTGSIPSSLGNLSSIHTISLAYNNLDGTIPNSFGWFENLVFLSLAANNLS 222 (949)
Q Consensus 171 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 222 (949)
|+|++..+..|..+++|++|+|++|++++..+..|..+++|++|+|++|.++
T Consensus 86 N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~ 137 (177)
T 2o6r_A 86 NKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWD 137 (177)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBC
T ss_pred CCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCee
Confidence 9999877778899999999999999999777777889999999999998765
No 386
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.60 E-value=3.9e-16 Score=170.29 Aligned_cols=145 Identities=13% Similarity=0.110 Sum_probs=104.2
Q ss_pred HHHHHhcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCC--------------cchHH--------HHHHHHHH
Q 039533 620 DLYNATSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHH--------------GASRS--------FIAECKAL 677 (949)
Q Consensus 620 ~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--------------~~~~~--------~~~E~~~l 677 (949)
.+.....-|++.+.||+|++|.||+|.+. +|+.||||+++.... ..... ..+|...+
T Consensus 89 ~L~~rg~iY~I~~~IG~Gk~a~VY~a~d~-~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL 167 (397)
T 4gyi_A 89 THAARKDVYSVGSRIGVGKESDIMIVADE-KGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFM 167 (397)
T ss_dssp HHHHTTSCSEEEEEEEECSSEEEEEEECT-TCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHCCCEEEecCEeeeCCceEEEEEECC-CCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHH
Confidence 34444455899999999999999999986 689999999863210 00011 23466666
Q ss_pred HhcCCCcce--eEEeeeecccccCCccceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHh
Q 039533 678 KSIRHRNLV--KVLTACLGADYRGNDFKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLH 755 (949)
Q Consensus 678 ~~l~h~niv--~~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH 755 (949)
.++.+.++. ..+++ ...++||||++|++|.++... .....++.|++.++.|||
T Consensus 168 ~rL~~~gv~vp~p~~~---------~~~~LVME~i~G~~L~~l~~~----------------~~~~~l~~qll~~l~~lH 222 (397)
T 4gyi_A 168 KALYEEGFPVPEPIAQ---------SRHTIVMSLVDALPMRQVSSV----------------PDPASLYADLIALILRLA 222 (397)
T ss_dssp HHHHHTTCSCCCEEEE---------ETTEEEEECCSCEEGGGCCCC----------------SCHHHHHHHHHHHHHHHH
T ss_pred HHHHhcCCCCCeeeec---------cCceEEEEecCCccHhhhccc----------------HHHHHHHHHHHHHHHHHH
Confidence 666444332 22221 134799999999888766530 123568899999999999
Q ss_pred hCCCCCeEecCCCCCCeeecCCC----------ceEEeecccceecCC
Q 039533 756 HDCQPVTAHCDLKPSNVLLDDYM----------TARVGDFGLARILSP 793 (949)
Q Consensus 756 ~~~~~~ivHrDlkp~NIll~~~~----------~~kl~DfG~a~~~~~ 793 (949)
.. |||||||||.|||+++++ .+.|+||+-+.....
T Consensus 223 ~~---gIVHrDLKp~NILl~~dgd~~d~~~~~~~~~iID~~Q~V~~~h 267 (397)
T 4gyi_A 223 KH---GLIHGDFNEFNILIREEKDAEDPSSITLTPIIIXFPQMVSMDH 267 (397)
T ss_dssp HT---TEECSCCSTTSEEEEEEECSSCTTSEEEEEEECCCTTCEETTS
T ss_pred HC---CCcCCCCCHHHEEEeCCCCcccccccccceEEEEeCCcccCCC
Confidence 77 899999999999998776 389999998876443
No 387
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.59 E-value=3.4e-14 Score=159.18 Aligned_cols=105 Identities=11% Similarity=0.104 Sum_probs=67.9
Q ss_pred cccEEEccCccccCCCCCCCCCCCcccEEEeecceec-----ccCCCcccccCCCCEEecCCcccccccCcccccccccc
Q 039533 295 TIKTLFLNNNKIYGSIPAGIGNFVNLQRLDMWNNQLS-----GTIPPAIGELQNLKILGLNRNKLSGNIPPSIGNLKMLL 369 (949)
Q Consensus 295 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-----~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 369 (949)
+|+.+.+ .+.++.+...+|.++++|+.+++.+|.+. ...+.+|.++++|+.++|. |.++.+-..+|.++++|+
T Consensus 249 ~L~~i~l-p~~i~~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~-~~i~~I~~~aF~~c~~L~ 326 (401)
T 4fdw_A 249 GITTVKL-PNGVTNIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIP-ESIRILGQGLLGGNRKVT 326 (401)
T ss_dssp CCSEEEE-ETTCCEECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCC-TTCCEECTTTTTTCCSCC
T ss_pred CccEEEe-CCCccEEChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeC-CceEEEhhhhhcCCCCcc
Confidence 4666666 34455455666777777777777776654 3455667777777777777 346645556677777777
Q ss_pred eeecccccccccCCCCCCCCCCCcEEEeeCcccc
Q 039533 370 NLFLNDNFLEVSIPSSLGQCESLIEINLSNNNLS 403 (949)
Q Consensus 370 ~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~ 403 (949)
.+.|.+| ++...+.+|.++ +|+.|++++|.+.
T Consensus 327 ~l~lp~~-l~~I~~~aF~~~-~L~~l~l~~n~~~ 358 (401)
T 4fdw_A 327 QLTIPAN-VTQINFSAFNNT-GIKEVKVEGTTPP 358 (401)
T ss_dssp EEEECTT-CCEECTTSSSSS-CCCEEEECCSSCC
T ss_pred EEEECcc-ccEEcHHhCCCC-CCCEEEEcCCCCc
Confidence 7777444 555556677777 7777777777665
No 388
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.58 E-value=9.5e-16 Score=147.09 Aligned_cols=125 Identities=21% Similarity=0.179 Sum_probs=52.0
Q ss_pred CCCEEecCCcccc-cccCcccccccccceeecccccccccCCCCCCCCCCCcEEEeeCccccCCCCCcccCCcccceeec
Q 039533 343 NLKILGLNRNKLS-GNIPPSIGNLKMLLNLFLNDNFLEVSIPSSLGQCESLIEINLSNNNLSGTIPPQFFSLSSLSISLD 421 (949)
Q Consensus 343 ~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~l~~~L~ 421 (949)
+|+.|++++|+++ +.+|..+..+++|+.|++++|.+++. ..+..+++|++|++++|++++.+|..+..+++| +.|+
T Consensus 18 ~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L-~~L~ 94 (149)
T 2je0_A 18 DVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNL-THLN 94 (149)
T ss_dssp GCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTC-CEEE
T ss_pred cCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCC-CEEE
Confidence 3444444444443 33343344444444444444444332 334444555555555555543333333333333 3333
Q ss_pred cCCCccCCC-CccccccccccceeeeccccccccCC---cccccccchhhccc
Q 039533 422 WSRNKLTGS-LPIEVGKLKILEFLYVYENRLEGEIP---STFGNCIRLEQLGM 470 (949)
Q Consensus 422 ls~N~l~~~-~p~~~~~l~~L~~L~Ls~N~l~~~~p---~~~~~l~~L~~L~l 470 (949)
+++|++++. .+..++.+++|++|++++|++++..+ ..++.+++|+.|++
T Consensus 95 ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l 147 (149)
T 2je0_A 95 LSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDG 147 (149)
T ss_dssp CTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETT
T ss_pred CCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccC
Confidence 333333321 12344444444444444444443322 23444444444443
No 389
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.58 E-value=3.5e-14 Score=159.09 Aligned_cols=266 Identities=11% Similarity=0.063 Sum_probs=190.9
Q ss_pred CCCCceeeccCceeccccCCcccCcccCcEEeeccccccCcCCCCCCCCccceeecCCCccccccccccccCCCCCcEEE
Q 039533 88 LSFLKQLYLQVNSFTHEIPSEIGGLRRLKVLALNNNSICGEIPTNISRCSTLIPIHPQNNQLVGKILSRFSSLSKTEILN 167 (949)
Q Consensus 88 l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~L~~L~~L~ 167 (949)
...++.+.+.+ +++..-..+|.++ +|+.++|..| ++..-...|.++ +|+.+.+.+ .+..+...+|.++++|+.++
T Consensus 112 ~~~l~~i~ip~-~i~~I~~~aF~~~-~L~~i~l~~~-i~~I~~~aF~~~-~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~ 186 (401)
T 4fdw_A 112 LKGYNEIILPN-SVKSIPKDAFRNS-QIAKVVLNEG-LKSIGDMAFFNS-TVQEIVFPS-TLEQLKEDIFYYCYNLKKAD 186 (401)
T ss_dssp CSSCSEEECCT-TCCEECTTTTTTC-CCSEEECCTT-CCEECTTTTTTC-CCCEEECCT-TCCEECSSTTTTCTTCCEEE
T ss_pred cCCccEEEECC-ccCEehHhhcccC-CccEEEeCCC-ccEECHHhcCCC-CceEEEeCC-CccEehHHHhhCcccCCeee
Confidence 35666666654 4554445577775 6888888766 653444566664 688888875 67777778888888888888
Q ss_pred CCCCCCCCCCCCCcCCCCCccEEeccccccCCCCCCcccCCCccccccccCcccccccccccCCCCChhhhccccccccc
Q 039533 168 LGSNHLTGSIPSSLGNLSSIHTISLAYNNLDGTIPNSFGWFENLVFLSLAANNLSVVENKLTGEVPSLEKLQRLQHFTIT 247 (949)
Q Consensus 168 Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~l~~~~~~l~~l~~L~~L~l~ 247 (949)
|++|.++......|. .++|+.+.|..+ ++.....+|.++++|+.+++..| ++.++...
T Consensus 187 l~~n~l~~I~~~aF~-~~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~~~-l~~I~~~a------------------- 244 (401)
T 4fdw_A 187 LSKTKITKLPASTFV-YAGIEEVLLPVT-LKEIGSQAFLKTSQLKTIEIPEN-VSTIGQEA------------------- 244 (401)
T ss_dssp CTTSCCSEECTTTTT-TCCCSEEECCTT-CCEECTTTTTTCTTCCCEECCTT-CCEECTTT-------------------
T ss_pred cCCCcceEechhhEe-ecccCEEEeCCc-hheehhhHhhCCCCCCEEecCCC-ccCccccc-------------------
Confidence 888888844445555 578888888744 66566778888888888887754 44443221
Q ss_pred cCCCCCCCCCCcchhccccccCcccEEEccCCCCCccCCchhhcccccccEEEccCcccc-----CCCCCCCCCCCcccE
Q 039533 248 SNSLGSGGNDDLSFLCSLTNATRLTWMHINSNNFGGLLPGCISNLSKTIKTLFLNNNKIY-----GSIPAGIGNFVNLQR 322 (949)
Q Consensus 248 ~N~l~~~~~~~~~~~~~l~~~~~L~~L~L~~N~l~~~~p~~~~~l~~~L~~L~L~~N~l~-----~~~~~~~~~l~~L~~ 322 (949)
|.+ .+|+.+.+ .++++.....+|.+. .+|+.+.+.+|.+. .+.+..|.++++|+.
T Consensus 245 -----------------F~~-~~L~~i~l-p~~i~~I~~~aF~~c-~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~ 304 (401)
T 4fdw_A 245 -----------------FRE-SGITTVKL-PNGVTNIASRAFYYC-PELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLAR 304 (401)
T ss_dssp -----------------TTT-CCCSEEEE-ETTCCEECTTTTTTC-TTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCE
T ss_pred -----------------ccc-CCccEEEe-CCCccEEChhHhhCC-CCCCEEEeCCccccCCcccEECHHHhhCCccCCe
Confidence 222 34556666 344554555566655 45778887777664 456778999999999
Q ss_pred EEeecceecccCCCcccccCCCCEEecCCcccccccCcccccccccceeecccccccccCCCCCCCCC-CCcEEEeeCcc
Q 039533 323 LDMWNNQLSGTIPPAIGELQNLKILGLNRNKLSGNIPPSIGNLKMLLNLFLNDNFLEVSIPSSLGQCE-SLIEINLSNNN 401 (949)
Q Consensus 323 L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~-~L~~L~l~~N~ 401 (949)
++|. |.++.+...+|.++.+|+.++|..| ++..-+.+|.++ +|+.+++.+|.+....+..|.+++ +++.|++..+.
T Consensus 305 l~l~-~~i~~I~~~aF~~c~~L~~l~lp~~-l~~I~~~aF~~~-~L~~l~l~~n~~~~l~~~~F~~~~~~l~~l~vp~~~ 381 (401)
T 4fdw_A 305 FEIP-ESIRILGQGLLGGNRKVTQLTIPAN-VTQINFSAFNNT-GIKEVKVEGTTPPQVFEKVWYGFPDDITVIRVPAES 381 (401)
T ss_dssp ECCC-TTCCEECTTTTTTCCSCCEEEECTT-CCEECTTSSSSS-CCCEEEECCSSCCBCCCSSCCCSCTTCCEEEECGGG
T ss_pred EEeC-CceEEEhhhhhcCCCCccEEEECcc-ccEEcHHhCCCC-CCCEEEEcCCCCcccccccccCCCCCccEEEeCHHH
Confidence 9999 4577677789999999999999665 776777889999 999999999998877788888884 78899988877
Q ss_pred cc
Q 039533 402 LS 403 (949)
Q Consensus 402 l~ 403 (949)
+.
T Consensus 382 ~~ 383 (401)
T 4fdw_A 382 VE 383 (401)
T ss_dssp HH
T ss_pred HH
Confidence 65
No 390
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.57 E-value=1.6e-15 Score=150.04 Aligned_cols=135 Identities=16% Similarity=0.121 Sum_probs=112.4
Q ss_pred CCCCCCCCCceeeccCceeccccCCcccCcc-cCcEEeeccccccCcCCCCCCCCccceeecCCCccccccccccccCCC
Q 039533 83 HFIGNLSFLKQLYLQVNSFTHEIPSEIGGLR-RLKVLALNNNSICGEIPTNISRCSTLIPIHPQNNQLVGKILSRFSSLS 161 (949)
Q Consensus 83 ~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~L~ 161 (949)
+.+.++++|++|+|++|+++ .+|. +..+. +|++|+|++|.|++. ..|+++++|++|++++|+|++..+..|..++
T Consensus 13 ~~~~~~~~L~~L~l~~n~l~-~i~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~ 88 (176)
T 1a9n_A 13 AQYTNAVRDRELDLRGYKIP-VIEN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALP 88 (176)
T ss_dssp CEEECTTSCEEEECTTSCCC-SCCC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCT
T ss_pred HhcCCcCCceEEEeeCCCCc-hhHH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCC
Confidence 34567888999999999998 4554 55554 999999999999854 6788999999999999999887777789999
Q ss_pred CCcEEECCCCCCCCCCCC--CcCCCCCccEEeccccccCCCCCCc----ccCCCccccccccCccccc
Q 039533 162 KTEILNLGSNHLTGSIPS--SLGNLSSIHTISLAYNNLDGTIPNS----FGWFENLVFLSLAANNLSV 223 (949)
Q Consensus 162 ~L~~L~Ls~N~l~~~~p~--~~~~l~~L~~L~L~~N~l~~~~p~~----~~~l~~L~~L~Ls~N~l~~ 223 (949)
+|++|+|++|.|+ .+|. .+..+++|++|+|++|.++ .+|.. ++.+++|++||+++|.+..
T Consensus 89 ~L~~L~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~-~~~~~~~~~~~~l~~L~~Ld~~~n~~~~ 154 (176)
T 1a9n_A 89 DLTELILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVT-NKKHYRLYVIYKVPQVRVLDFQKVKLKE 154 (176)
T ss_dssp TCCEEECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGG-GSTTHHHHHHHHCTTCSEETTEECCHHH
T ss_pred CCCEEECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCC-CcHhHHHHHHHHCCccceeCCCcCCHHH
Confidence 9999999999997 5665 7888999999999999998 55664 8889999999999888764
No 391
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.55 E-value=5.1e-17 Score=164.18 Aligned_cols=132 Identities=26% Similarity=0.279 Sum_probs=61.1
Q ss_pred ccccccccceeecccccccccCCCCCCCCCCCcEEEeeCccccCCCCCcccCCcccceeeccCCCccCCCCccccccccc
Q 039533 361 SIGNLKMLLNLFLNDNFLEVSIPSSLGQCESLIEINLSNNNLSGTIPPQFFSLSSLSISLDWSRNKLTGSLPIEVGKLKI 440 (949)
Q Consensus 361 ~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~l~~~L~ls~N~l~~~~p~~~~~l~~ 440 (949)
.+.++++|++|++++|.+++ +| .+..+++|++|++++|+++ .+|..+..+++| +.|++++|++++ +| .+..+++
T Consensus 43 ~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~~L-~~L~L~~N~l~~-l~-~~~~l~~ 116 (198)
T 1ds9_A 43 TLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVADTL-EELWISYNQIAS-LS-GIEKLVN 116 (198)
T ss_dssp HHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHHHC-SEEEEEEEECCC-HH-HHHHHHH
T ss_pred HHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhcCCcC-CEEECcCCcCCc-CC-ccccCCC
Confidence 34444444444444444443 33 4444444444444444444 333333333333 333333333332 22 3455556
Q ss_pred cceeeeccccccccCC-cccccccchhhcccCccccccccCCC----------cCCCCCCCEEECCCCcCC
Q 039533 441 LEFLYVYENRLEGEIP-STFGNCIRLEQLGMGGNLFQGPISSS----------LGSLRGLRVLDLSQNNLS 500 (949)
Q Consensus 441 L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~l~~N~l~~~~~~~----------~~~l~~L~~L~Ls~N~l~ 500 (949)
|++|++++|++++..+ ..+..+++|+.|++++|.+++.+|.. +..+++|+.|| +|.++
T Consensus 117 L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~~l~~L~~Ld--~~~i~ 185 (198)
T 1ds9_A 117 LRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKENNATSEYRIEVVKRLPNLKKLD--GMPVD 185 (198)
T ss_dssp SSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHHTTTTHHHHHHHHHHHCSSCSEEC--CGGGT
T ss_pred CCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCccccccccccchHHHHHHHHHhCCCcEEEC--CcccC
Confidence 6666666666653221 24555555555555555555544432 55555566554 44443
No 392
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.52 E-value=6.3e-13 Score=149.61 Aligned_cols=311 Identities=13% Similarity=0.076 Sum_probs=164.5
Q ss_pred cCCCCCCCCCceeeccCceeccccCCcccCcccCcEEeeccccccCcCCCCCCCCccceeecCCCccccccccccccCCC
Q 039533 82 SHFIGNLSFLKQLYLQVNSFTHEIPSEIGGLRRLKVLALNNNSICGEIPTNISRCSTLIPIHPQNNQLVGKILSRFSSLS 161 (949)
Q Consensus 82 ~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~L~ 161 (949)
..+|.++++|+.+.|.. +++..-..+|.++++|+.++|.++ ++..-...|.++++|+.+.+..+ +......+|.+..
T Consensus 64 ~~AF~~c~~L~~i~lp~-~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~c~~L~~i~~p~~-l~~i~~~aF~~~~ 140 (394)
T 4fs7_A 64 YAAFQGCRKVTEIKIPS-TVREIGEFAFENCSKLEIINIPDS-VKMIGRCTFSGCYALKSILLPLM-LKSIGVEAFKGCD 140 (394)
T ss_dssp TTTTTTCTTEEEEECCT-TCCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCCCCCCTT-CCEECTTTTTTCC
T ss_pred HHHhhCCCCceEEEeCC-CccCcchhHhhCCCCCcEEEeCCC-ceEccchhhcccccchhhcccCc-eeeecceeeeccc
Confidence 35677788888888864 366444567888888888888755 54333456778888887776644 5555566677665
Q ss_pred CCcEEECCCCCCCCCCCCCcCCCCCccEEeccccccCCCCCCcccCCCccccccccCcccccccccccCCCCChhhhccc
Q 039533 162 KTEILNLGSNHLTGSIPSSLGNLSSIHTISLAYNNLDGTIPNSFGWFENLVFLSLAANNLSVVENKLTGEVPSLEKLQRL 241 (949)
Q Consensus 162 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~l~~~~~~l~~l~~L 241 (949)
.++......... .....|.++++|+.+.+.++. ......+|.++.+|+.+++..| ++.++.. .+..+..|
T Consensus 141 ~~~~~~~~~~~~--i~~~aF~~c~~L~~i~l~~~~-~~I~~~~F~~c~~L~~i~l~~~-~~~I~~~------~F~~~~~L 210 (394)
T 4fs7_A 141 FKEITIPEGVTV--IGDEAFATCESLEYVSLPDSM-ETLHNGLFSGCGKLKSIKLPRN-LKIIRDY------CFAECILL 210 (394)
T ss_dssp CSEEECCTTCCE--ECTTTTTTCTTCCEEECCTTC-CEECTTTTTTCTTCCBCCCCTT-CCEECTT------TTTTCTTC
T ss_pred ccccccCccccc--cchhhhcccCCCcEEecCCcc-ceeccccccCCCCceEEEcCCC-ceEeCch------hhcccccc
Confidence 554444333322 234567788888888886553 3355667777888888877655 4433322 12233333
Q ss_pred cccccccCCCCCCCCCCcchhccccccCcccEEEccCCCCCccCCchhhcccccccEEEccCccccCCCCCCCCCCCccc
Q 039533 242 QHFTITSNSLGSGGNDDLSFLCSLTNATRLTWMHINSNNFGGLLPGCISNLSKTIKTLFLNNNKIYGSIPAGIGNFVNLQ 321 (949)
Q Consensus 242 ~~L~l~~N~l~~~~~~~~~~~~~l~~~~~L~~L~L~~N~l~~~~p~~~~~l~~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 321 (949)
+.+.+..+.. . +....... ..|+.+.+..+ ++......+..+.+|+
T Consensus 211 ~~i~~~~~~~------------------------------~--i~~~~~~~-~~l~~i~ip~~-~~~i~~~~f~~~~~l~ 256 (394)
T 4fs7_A 211 ENMEFPNSLY------------------------------Y--LGDFALSK-TGVKNIIIPDS-FTELGKSVFYGCTDLE 256 (394)
T ss_dssp CBCCCCTTCC------------------------------E--ECTTTTTT-CCCCEEEECTT-CCEECSSTTTTCSSCC
T ss_pred ceeecCCCce------------------------------E--eehhhccc-CCCceEEECCC-ceecccccccccccce
Confidence 3333322211 1 00111111 23455554432 2223344555666666
Q ss_pred EEEeecceecccCCCcccccCCCCEEecCCcccccccCcccccccccceeecccccccccCCCCCCCCCCCcEEEeeCcc
Q 039533 322 RLDMWNNQLSGTIPPAIGELQNLKILGLNRNKLSGNIPPSIGNLKMLLNLFLNDNFLEVSIPSSLGQCESLIEINLSNNN 401 (949)
Q Consensus 322 ~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~ 401 (949)
.+.+..+... .....|..+..++.+.+..+.+. ...|.++.+|+.+.+.++ ++.....+|.++++|+.+++.++
T Consensus 257 ~~~~~~~~~~-i~~~~F~~~~~l~~~~~~~~~i~---~~~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~- 330 (394)
T 4fs7_A 257 SISIQNNKLR-IGGSLFYNCSGLKKVIYGSVIVP---EKTFYGCSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL- 330 (394)
T ss_dssp EEEECCTTCE-ECSCTTTTCTTCCEEEECSSEEC---TTTTTTCTTCCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-
T ss_pred eEEcCCCcce-eeccccccccccceeccCceeec---cccccccccccccccccc-cceechhhhcCCCCCCEEEeCCc-
Confidence 6666655443 44556666666666665554322 234555666666666544 44444555666666666655432
Q ss_pred ccCCCCCcccCCcccceeeccCCCccCCCCccccccccccceeeec
Q 039533 402 LSGTIPPQFFSLSSLSISLDWSRNKLTGSLPIEVGKLKILEFLYVY 447 (949)
Q Consensus 402 l~~~~p~~~~~l~~l~~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls 447 (949)
++..-...|.++.+| +.+++..| ++..-..+|.++.+|+.+++.
T Consensus 331 v~~I~~~aF~~c~~L-~~i~lp~~-l~~I~~~aF~~C~~L~~i~lp 374 (394)
T 4fs7_A 331 VEEIGKRSFRGCTSL-SNINFPLS-LRKIGANAFQGCINLKKVELP 374 (394)
T ss_dssp CCEECTTTTTTCTTC-CEECCCTT-CCEECTTTBTTCTTCCEEEEE
T ss_pred ccEEhHHhccCCCCC-CEEEECcc-ccEehHHHhhCCCCCCEEEEC
Confidence 331112233333444 33444333 332333344444444444443
No 393
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.52 E-value=1.1e-16 Score=161.76 Aligned_cols=150 Identities=20% Similarity=0.271 Sum_probs=90.7
Q ss_pred cccEEEccCccccCCCCC------CCCCCCcccEEEeecceecccCCCcccccCCCCEEecCCcccccccCccccccccc
Q 039533 295 TIKTLFLNNNKIYGSIPA------GIGNFVNLQRLDMWNNQLSGTIPPAIGELQNLKILGLNRNKLSGNIPPSIGNLKML 368 (949)
Q Consensus 295 ~L~~L~L~~N~l~~~~~~------~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 368 (949)
.++.++++.+.++|.+|. .+..+++|++|+|++|.+++ +| .+.++++|+.|+|++|+++ .+|..+..+++|
T Consensus 19 ~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~~L 95 (198)
T 1ds9_A 19 SVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVADTL 95 (198)
T ss_dssp CCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHHHC
T ss_pred cccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhcCCcC
Confidence 466666666666666555 56666666666666666664 44 5666666666666666666 455555555666
Q ss_pred ceeecccccccccCCCCCCCCCCCcEEEeeCccccCCCCCcccCCcccceeeccCCCccCCCCc-cccccccccceeeec
Q 039533 369 LNLFLNDNFLEVSIPSSLGQCESLIEINLSNNNLSGTIPPQFFSLSSLSISLDWSRNKLTGSLP-IEVGKLKILEFLYVY 447 (949)
Q Consensus 369 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~l~~~L~ls~N~l~~~~p-~~~~~l~~L~~L~Ls 447 (949)
+.|++++|++++ +| .+..+++|++|++++|+++ +..+ ..+..+++|++|+++
T Consensus 96 ~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~-------------------------~~~~~~~l~~l~~L~~L~l~ 148 (198)
T 1ds9_A 96 EELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKIT-------------------------NWGEIDKLAALDKLEDLLLA 148 (198)
T ss_dssp SEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECC-------------------------CHHHHHHHTTTTTCSEEEEC
T ss_pred CEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCC-------------------------chhHHHHHhcCCCCCEEEec
Confidence 666666666654 23 3455555555555555554 2111 355666777777777
Q ss_pred cccccccCCcc----------cccccchhhcccCccccc
Q 039533 448 ENRLEGEIPST----------FGNCIRLEQLGMGGNLFQ 476 (949)
Q Consensus 448 ~N~l~~~~p~~----------~~~l~~L~~L~l~~N~l~ 476 (949)
+|++++.+|.. +..+++|+.|| +|.++
T Consensus 149 ~N~l~~~~~~~~~~~~~~~~~~~~l~~L~~Ld--~~~i~ 185 (198)
T 1ds9_A 149 GNPLYNDYKENNATSEYRIEVVKRLPNLKKLD--GMPVD 185 (198)
T ss_dssp SCHHHHHHHTTTTHHHHHHHHHHHCSSCSEEC--CGGGT
T ss_pred CCccccccccccchHHHHHHHHHhCCCcEEEC--CcccC
Confidence 77777665543 66777777766 55554
No 394
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.52 E-value=9.7e-15 Score=144.32 Aligned_cols=133 Identities=17% Similarity=0.162 Sum_probs=83.3
Q ss_pred ccccCcccEEEccCCCCCccCCchhhcccccccEEEccCccccCCCCCCCCCCCcccEEEeecceecccCCCcccccCCC
Q 039533 265 LTNATRLTWMHINSNNFGGLLPGCISNLSKTIKTLFLNNNKIYGSIPAGIGNFVNLQRLDMWNNQLSGTIPPAIGELQNL 344 (949)
Q Consensus 265 l~~~~~L~~L~L~~N~l~~~~p~~~~~l~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L 344 (949)
+.++++|++|++++|+++.. |. +..+.++|++|+|++|+|++. ..+..+++|++|+|++|+|++..+..|..+++|
T Consensus 15 ~~~~~~L~~L~l~~n~l~~i-~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 90 (176)
T 1a9n_A 15 YTNAVRDRELDLRGYKIPVI-EN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDL 90 (176)
T ss_dssp EECTTSCEEEECTTSCCCSC-CC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTC
T ss_pred cCCcCCceEEEeeCCCCchh-HH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCC
Confidence 34455666677777766643 33 444444577777777777654 566677777777777777775544445667777
Q ss_pred CEEecCCcccccccCc--ccccccccceeecccccccccCCCC----CCCCCCCcEEEeeCcccc
Q 039533 345 KILGLNRNKLSGNIPP--SIGNLKMLLNLFLNDNFLEVSIPSS----LGQCESLIEINLSNNNLS 403 (949)
Q Consensus 345 ~~L~Ls~N~l~~~~p~--~~~~l~~L~~L~L~~N~l~~~~p~~----~~~l~~L~~L~l~~N~l~ 403 (949)
+.|+|++|+|+ .+|. .+.++++|+.|++++|.++ .+|.. +..+++|+.|++++|.+.
T Consensus 91 ~~L~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~-~~~~~~~~~~~~l~~L~~Ld~~~n~~~ 153 (176)
T 1a9n_A 91 TELILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVT-NKKHYRLYVIYKVPQVRVLDFQKVKLK 153 (176)
T ss_dssp CEEECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGG-GSTTHHHHHHHHCTTCSEETTEECCHH
T ss_pred CEEECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCC-CcHhHHHHHHHHCCccceeCCCcCCHH
Confidence 77777777775 3444 5666666666666666665 34443 566666666666666554
No 395
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.49 E-value=6.8e-13 Score=149.33 Aligned_cols=317 Identities=12% Similarity=0.071 Sum_probs=161.7
Q ss_pred eccccCCcccCcccCcEEeeccccccCcCCCCCCCCccceeecCCCccccccccccccCCCCCcEEECCCCCCCCCCCCC
Q 039533 101 FTHEIPSEIGGLRRLKVLALNNNSICGEIPTNISRCSTLIPIHPQNNQLVGKILSRFSSLSKTEILNLGSNHLTGSIPSS 180 (949)
Q Consensus 101 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~L~~L~~L~Ls~N~l~~~~p~~ 180 (949)
++..-..+|.++++|+.+.|..+ ++..-...|.+|++|+.+++.++ ++.+...+|.++.+|+.+.+..+ +.......
T Consensus 59 VtsIg~~AF~~c~~L~~i~lp~~-i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~c~~L~~i~~p~~-l~~i~~~a 135 (394)
T 4fs7_A 59 VVSIGYAAFQGCRKVTEIKIPST-VREIGEFAFENCSKLEIINIPDS-VKMIGRCTFSGCYALKSILLPLM-LKSIGVEA 135 (394)
T ss_dssp EEEECTTTTTTCTTEEEEECCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCCCCCCTT-CCEECTTT
T ss_pred EeEhHHHHhhCCCCceEEEeCCC-ccCcchhHhhCCCCCcEEEeCCC-ceEccchhhcccccchhhcccCc-eeeeccee
Confidence 44344557888888888888643 65334456788888888888654 56566677777777777766554 33244455
Q ss_pred cCCCCCccEEeccccccCCCCCCcccCCCccccccccCcccccccccccCCCCChhhhccccccccccCCCCCCCCCCcc
Q 039533 181 LGNLSSIHTISLAYNNLDGTIPNSFGWFENLVFLSLAANNLSVVENKLTGEVPSLEKLQRLQHFTITSNSLGSGGNDDLS 260 (949)
Q Consensus 181 ~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~l~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~ 260 (949)
|.+...+........ ......+|.++++|+.+.+..+. ..++..
T Consensus 136 F~~~~~~~~~~~~~~--~~i~~~aF~~c~~L~~i~l~~~~-~~I~~~--------------------------------- 179 (394)
T 4fs7_A 136 FKGCDFKEITIPEGV--TVIGDEAFATCESLEYVSLPDSM-ETLHNG--------------------------------- 179 (394)
T ss_dssp TTTCCCSEEECCTTC--CEECTTTTTTCTTCCEEECCTTC-CEECTT---------------------------------
T ss_pred eecccccccccCccc--cccchhhhcccCCCcEEecCCcc-ceeccc---------------------------------
Confidence 655544333332222 22334566667777776665432 222211
Q ss_pred hhccccccCcccEEEccCCCCCccCCchhhcccccccEEEccCccccCCCCCCCCCCCcccEEEeecceecccCCCcccc
Q 039533 261 FLCSLTNATRLTWMHINSNNFGGLLPGCISNLSKTIKTLFLNNNKIYGSIPAGIGNFVNLQRLDMWNNQLSGTIPPAIGE 340 (949)
Q Consensus 261 ~~~~l~~~~~L~~L~L~~N~l~~~~p~~~~~l~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~ 340 (949)
.+.++++|+.+.+..| ++.....++.+. ..|+.+.+..+... +.+.....++|+.+.+..+. +......|.+
T Consensus 180 ---~F~~c~~L~~i~l~~~-~~~I~~~~F~~~-~~L~~i~~~~~~~~--i~~~~~~~~~l~~i~ip~~~-~~i~~~~f~~ 251 (394)
T 4fs7_A 180 ---LFSGCGKLKSIKLPRN-LKIIRDYCFAEC-ILLENMEFPNSLYY--LGDFALSKTGVKNIIIPDSF-TELGKSVFYG 251 (394)
T ss_dssp ---TTTTCTTCCBCCCCTT-CCEECTTTTTTC-TTCCBCCCCTTCCE--ECTTTTTTCCCCEEEECTTC-CEECSSTTTT
T ss_pred ---cccCCCCceEEEcCCC-ceEeCchhhccc-cccceeecCCCceE--eehhhcccCCCceEEECCCc-eecccccccc
Confidence 1222333333333322 222222223222 23455544444332 22333344566666665432 2234455666
Q ss_pred cCCCCEEecCCcccccccCcccccccccceeecccccccccCCCCCCCCCCCcEEEeeCccccCCCCCcccCCcccceee
Q 039533 341 LQNLKILGLNRNKLSGNIPPSIGNLKMLLNLFLNDNFLEVSIPSSLGQCESLIEINLSNNNLSGTIPPQFFSLSSLSISL 420 (949)
Q Consensus 341 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~l~~~L 420 (949)
+.+|+.+.+..+..+ .....|.++..++.+....+.+ ....|..+.+|+.+.+.++ ++
T Consensus 252 ~~~l~~~~~~~~~~~-i~~~~F~~~~~l~~~~~~~~~i---~~~~F~~~~~L~~i~l~~~-i~----------------- 309 (394)
T 4fs7_A 252 CTDLESISIQNNKLR-IGGSLFYNCSGLKKVIYGSVIV---PEKTFYGCSSLTEVKLLDS-VK----------------- 309 (394)
T ss_dssp CSSCCEEEECCTTCE-ECSCTTTTCTTCCEEEECSSEE---CTTTTTTCTTCCEEEECTT-CC-----------------
T ss_pred cccceeEEcCCCcce-eeccccccccccceeccCceee---ccccccccccccccccccc-cc-----------------
Confidence 666666666655443 4455566666666665554432 2335556666666666443 33
Q ss_pred ccCCCccCCCCccccccccccceeeeccccccccCCcccccccchhhcccCccccccccCCCcCCCCCCCEEECCC
Q 039533 421 DWSRNKLTGSLPIEVGKLKILEFLYVYENRLEGEIPSTFGNCIRLEQLGMGGNLFQGPISSSLGSLRGLRVLDLSQ 496 (949)
Q Consensus 421 ~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~ 496 (949)
.+-..+|.++.+|+.++|.++ ++..-..+|.+|.+|+.+++..| ++..-..+|.++.+|+.+++..
T Consensus 310 --------~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~lp~ 375 (394)
T 4fs7_A 310 --------FIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS-LRKIGANAFQGCINLKKVELPK 375 (394)
T ss_dssp --------EECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTBTTCTTCCEEEEEG
T ss_pred --------eechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc-ccEehHHHhhCCCCCCEEEECC
Confidence 222334444444555544332 33333445555555555555444 4434444555555555555543
No 396
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.47 E-value=1.2e-13 Score=135.43 Aligned_cols=87 Identities=29% Similarity=0.297 Sum_probs=45.8
Q ss_pred ccCcEEeeccccccCcCCCCCCCCccceeecCCCccccccccccccCCCCCcEEECCCCCCCCCCCCCcCCCCCccEEec
Q 039533 113 RRLKVLALNNNSICGEIPTNISRCSTLIPIHPQNNQLVGKILSRFSSLSKTEILNLGSNHLTGSIPSSLGNLSSIHTISL 192 (949)
Q Consensus 113 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 192 (949)
++|++|+|++|+|++..|..|.++++|++|+|++|+|++..+..|..+++|++|+|++|+|++..+..|.++++|++|+|
T Consensus 30 ~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 109 (170)
T 3g39_A 30 TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDNQLKSIPRGAFDNLKSLTHIWL 109 (170)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCCccCEeCHHHhcCCCCCCEEEe
Confidence 33444444444444333444444444444444444444444444555556666666666666555555666666666666
Q ss_pred cccccCC
Q 039533 193 AYNNLDG 199 (949)
Q Consensus 193 ~~N~l~~ 199 (949)
++|.++.
T Consensus 110 ~~N~~~c 116 (170)
T 3g39_A 110 LNNPWDC 116 (170)
T ss_dssp CSSCBCT
T ss_pred CCCCCCC
Confidence 6666653
No 397
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.46 E-value=1.4e-13 Score=134.81 Aligned_cols=106 Identities=22% Similarity=0.264 Sum_probs=96.7
Q ss_pred cCcEEeeccccccCcCCCCCCCCccceeecCCCccccccccccccCCCCCcEEECCCCCCCCCCCCCcCCCCCccEEecc
Q 039533 114 RLKVLALNNNSICGEIPTNISRCSTLIPIHPQNNQLVGKILSRFSSLSKTEILNLGSNHLTGSIPSSLGNLSSIHTISLA 193 (949)
Q Consensus 114 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 193 (949)
..+.|++++|.++ .+|..+. ++|++|++++|+|++..+..|.++++|++|+|++|+|++..+..|.++++|++|+|+
T Consensus 10 ~~~~l~~s~n~l~-~ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~ 86 (170)
T 3g39_A 10 SGTTVDCSGKSLA-SVPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLN 86 (170)
T ss_dssp ETTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCCEEEeCCCCcC-ccCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECC
Confidence 4578999999998 6888774 889999999999999999999999999999999999998777788999999999999
Q ss_pred ccccCCCCCCcccCCCccccccccCcccc
Q 039533 194 YNNLDGTIPNSFGWFENLVFLSLAANNLS 222 (949)
Q Consensus 194 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 222 (949)
+|+|++..+..|..+++|++|+|++|.++
T Consensus 87 ~N~l~~~~~~~~~~l~~L~~L~L~~N~~~ 115 (170)
T 3g39_A 87 DNQLKSIPRGAFDNLKSLTHIWLLNNPWD 115 (170)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCBC
T ss_pred CCccCEeCHHHhcCCCCCCEEEeCCCCCC
Confidence 99999877788999999999999999875
No 398
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.45 E-value=2.3e-13 Score=133.82 Aligned_cols=86 Identities=28% Similarity=0.286 Sum_probs=43.4
Q ss_pred ccCcEEeeccccccCcCCCCCCCCccceeecCCCccccccccccccCCCCCcEEECCCCCCCCCCCCCcCCCCCccEEec
Q 039533 113 RRLKVLALNNNSICGEIPTNISRCSTLIPIHPQNNQLVGKILSRFSSLSKTEILNLGSNHLTGSIPSSLGNLSSIHTISL 192 (949)
Q Consensus 113 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 192 (949)
++|++|+|++|+|++..|..|+++++|++|+|++|+|++..+..|..+++|++|+|++|+|++..+..|..+++|++|+|
T Consensus 33 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L 112 (174)
T 2r9u_A 33 TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDNHLKSIPRGAFDNLKSLTHIYL 112 (174)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEEC
T ss_pred CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCCccceeCHHHhccccCCCEEEe
Confidence 34444444444444333334444444433333333333333344455555566666666666444444666666666666
Q ss_pred cccccC
Q 039533 193 AYNNLD 198 (949)
Q Consensus 193 ~~N~l~ 198 (949)
++|.+.
T Consensus 113 ~~N~~~ 118 (174)
T 2r9u_A 113 YNNPWD 118 (174)
T ss_dssp CSSCBC
T ss_pred CCCCcc
Confidence 666665
No 399
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.44 E-value=2.5e-13 Score=133.57 Aligned_cols=106 Identities=20% Similarity=0.266 Sum_probs=95.5
Q ss_pred CcEEeeccccccCcCCCCCCCCccceeecCCCccccccccccccCCCCCcEEECCCCCCCCCCCCCcCCCCCccEEeccc
Q 039533 115 LKVLALNNNSICGEIPTNISRCSTLIPIHPQNNQLVGKILSRFSSLSKTEILNLGSNHLTGSIPSSLGNLSSIHTISLAY 194 (949)
Q Consensus 115 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 194 (949)
-+.+++++|+++ .+|..+. ++|++|++++|+|++..+..|.++++|++|+|++|+|++..+..|.++++|++|+|++
T Consensus 14 ~~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~ 90 (174)
T 2r9u_A 14 QTLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLND 90 (174)
T ss_dssp SSEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CcEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCC
Confidence 378999999996 7888775 8899999999999999999999999999999999999977667789999999999999
Q ss_pred cccCCCCCCcccCCCccccccccCccccc
Q 039533 195 NNLDGTIPNSFGWFENLVFLSLAANNLSV 223 (949)
Q Consensus 195 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 223 (949)
|+|++..+..|..+++|++|+|++|.+..
T Consensus 91 N~l~~l~~~~~~~l~~L~~L~L~~N~~~c 119 (174)
T 2r9u_A 91 NHLKSIPRGAFDNLKSLTHIYLYNNPWDC 119 (174)
T ss_dssp SCCCCCCTTTTTTCTTCSEEECCSSCBCT
T ss_pred CccceeCHHHhccccCCCEEEeCCCCccc
Confidence 99997777779999999999999998764
No 400
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.31 E-value=2.2e-12 Score=142.62 Aligned_cols=108 Identities=23% Similarity=0.297 Sum_probs=69.8
Q ss_pred ceeeeeEEeCCCCcEEEEEcCCCCCCccccCCCCCCCCCceeeccC-ceeccccCCcccCcccCcEEeeccccccCcCCC
Q 039533 53 CKWYGVTCSRRHQRVTLLDLRSLKLAGSVSHFIGNLSFLKQLYLQV-NSFTHEIPSEIGGLRRLKVLALNNNSICGEIPT 131 (949)
Q Consensus 53 C~w~gv~C~~~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~-n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~ 131 (949)
|+|.+|.|++. ++|+ .+|. |+.+++|++|+|++ |.|++..|..|++|++|++|+|++|+|++..|.
T Consensus 8 C~~~~v~~~~~-----------n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~ 74 (347)
T 2ifg_A 8 HGSSGLRCTRD-----------GALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPD 74 (347)
T ss_dssp SSSSCEECCSS-----------CCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTT
T ss_pred ccCCEEEcCCC-----------CCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHH
Confidence 78877777431 1455 3666 77777777777775 777766666777777777777777777765555
Q ss_pred CCCCCccceeecCCCccccccccccccCCCCCcEEECCCCCCCCCCCCCcCCCCCccEEeccccccC
Q 039533 132 NISRCSTLIPIHPQNNQLVGKILSRFSSLSKTEILNLGSNHLTGSIPSSLGNLSSIHTISLAYNNLD 198 (949)
Q Consensus 132 ~~~~l~~L~~L~l~~n~l~~~~~~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 198 (949)
.|++|++ |++|+|++|+|++..+..|..++ |+.|+|++|.+.
T Consensus 75 ~~~~l~~------------------------L~~L~l~~N~l~~~~~~~~~~~~-L~~l~l~~N~~~ 116 (347)
T 2ifg_A 75 AFHFTPR------------------------LSRLNLSFNALESLSWKTVQGLS-LQELVLSGNPLH 116 (347)
T ss_dssp GGGSCSC------------------------CCEEECCSSCCSCCCSTTTCSCC-CCEEECCSSCCC
T ss_pred HhcCCcC------------------------CCEEeCCCCccceeCHHHcccCC-ceEEEeeCCCcc
Confidence 5555554 46666666666644444444444 666666666665
No 401
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.29 E-value=3.9e-12 Score=140.59 Aligned_cols=106 Identities=25% Similarity=0.175 Sum_probs=75.8
Q ss_pred eeccCCC-ccCCCCccccccccccceeeecc-ccccccCCcccccccchhhcccCccccccccCCCcCCCCCCCEEECCC
Q 039533 419 SLDWSRN-KLTGSLPIEVGKLKILEFLYVYE-NRLEGEIPSTFGNCIRLEQLGMGGNLFQGPISSSLGSLRGLRVLDLSQ 496 (949)
Q Consensus 419 ~L~ls~N-~l~~~~p~~~~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~ 496 (949)
.++++++ +|+ .+|. +..+++|+.|+|++ |+|++..|..|+++++|+.|+|++|+|++..|..|.+|++|+.|||++
T Consensus 12 ~v~~~~~n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~ 89 (347)
T 2ifg_A 12 GLRCTRDGALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSF 89 (347)
T ss_dssp CEECCSSCCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCS
T ss_pred EEEcCCCCCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCC
Confidence 3566665 666 3555 67777777777775 777766667777777777777777777777777777777777777777
Q ss_pred CcCCCcCcccccCCccceEeCCCCcCcCcc
Q 039533 497 NNLSGEIPKFLAGLSLNNLNLSYNDLEGMV 526 (949)
Q Consensus 497 N~l~~~~p~~~~~~~L~~l~ls~N~l~~~~ 526 (949)
|+|++.++..+..++|+.|+|++|+|....
T Consensus 90 N~l~~~~~~~~~~~~L~~l~l~~N~~~c~c 119 (347)
T 2ifg_A 90 NALESLSWKTVQGLSLQELVLSGNPLHCSC 119 (347)
T ss_dssp SCCSCCCSTTTCSCCCCEEECCSSCCCCCG
T ss_pred CccceeCHHHcccCCceEEEeeCCCccCCC
Confidence 777766666666666777777777777643
No 402
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=99.26 E-value=3.3e-10 Score=127.25 Aligned_cols=131 Identities=15% Similarity=0.139 Sum_probs=89.2
Q ss_pred CCCCCCC-CCceeeccCceeccccCCcccCcccCcEEeecccc---ccCcCCCCCCCCccceeecCCCcccccccccccc
Q 039533 83 HFIGNLS-FLKQLYLQVNSFTHEIPSEIGGLRRLKVLALNNNS---ICGEIPTNISRCSTLIPIHPQNNQLVGKILSRFS 158 (949)
Q Consensus 83 ~~l~~l~-~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~---l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~ 158 (949)
.+|.+.. .|+.+.+-.+ ++..-..+|.++++|+.+.++.|. ++..-...|.++.+|+.+.+..+ ++.+....|.
T Consensus 57 ~aF~~~~~~L~sI~iP~s-vt~Ig~~AF~~C~~L~~i~~~~n~p~~l~~Ig~~aF~~c~~L~~i~~~~~-~~~I~~~aF~ 134 (394)
T 4gt6_A 57 RVFCNYKYVLTSVQIPDT-VTEIGSNAFYNCTSLKRVTIQDNKPSCVKKIGRQAFMFCSELTDIPILDS-VTEIDSEAFH 134 (394)
T ss_dssp TTTTTCCSCCCEEEECTT-CCEECTTTTTTCTTCCEEEEGGGCCCCCCEECTTTTTTCTTCCBCGGGTT-CSEECTTTTT
T ss_pred hhccCCCCcCEEEEECCC-eeEEhHHHhhCCccCceEeecCCCCCeeeEechhhchhcccceeeccCCc-cceehhhhhh
Confidence 4566664 5888888654 665556788899999999988774 55333456888888888877654 5556677788
Q ss_pred CCCCCcEEECCCCCCCCCCCCCcCCCCCccEEeccccccCCCCCCcccCCCccccccccC
Q 039533 159 SLSKTEILNLGSNHLTGSIPSSLGNLSSIHTISLAYNNLDGTIPNSFGWFENLVFLSLAA 218 (949)
Q Consensus 159 ~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~ 218 (949)
...+|+.+.+..+. +......|..+.+|+.+.+..+ ++.....+|.. .+|+.+.+..
T Consensus 135 ~c~~L~~i~lp~~~-~~I~~~~F~~c~~L~~i~~~~~-~~~I~~~aF~~-~~l~~i~ip~ 191 (394)
T 4gt6_A 135 HCEELDTVTIPEGV-TSVADGMFSYCYSLHTVTLPDS-VTAIEERAFTG-TALTQIHIPA 191 (394)
T ss_dssp TCTTCCEEECCTTC-CEECTTTTTTCTTCCEEECCTT-CCEECTTTTTT-CCCSEEEECT
T ss_pred hhccccccccccee-eeecccceecccccccccccce-eeEeccccccc-cceeEEEECC
Confidence 88888888887543 3245567778888888888654 44344445543 4566666543
No 403
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.24 E-value=9e-14 Score=154.22 Aligned_cols=38 Identities=24% Similarity=0.294 Sum_probs=17.0
Q ss_pred CCccEEeccccccCC----CCCCcccCCCccccccccCcccc
Q 039533 185 SSIHTISLAYNNLDG----TIPNSFGWFENLVFLSLAANNLS 222 (949)
Q Consensus 185 ~~L~~L~L~~N~l~~----~~p~~~~~l~~L~~L~Ls~N~l~ 222 (949)
++|++|+|++|.|+. .++..+...++|++|+|++|.|+
T Consensus 155 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~ 196 (372)
T 3un9_A 155 CQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLG 196 (372)
T ss_dssp CCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCH
T ss_pred CccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCC
Confidence 344555555554432 12222344445555555555443
No 404
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.22 E-value=2.6e-11 Score=128.19 Aligned_cols=149 Identities=16% Similarity=0.063 Sum_probs=114.4
Q ss_pred HHHHHhcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCCcchHHHHHHHHHHHhcC-CCcceeEEeeeeccccc
Q 039533 620 DLYNATSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHGASRSFIAECKALKSIR-HRNLVKVLTACLGADYR 698 (949)
Q Consensus 620 ~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~ 698 (949)
.+.....+|++...++.|+.+.||++... ++.+++|+...........+.+|+++++.+. +..++++++++...
T Consensus 8 ~l~~~l~~~~~~~~~~g~s~~~v~~~~~~--~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~--- 82 (263)
T 3tm0_A 8 ELKKLIEKYRCVKDTEGMSPAKVYKLVGE--NENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHD--- 82 (263)
T ss_dssp HHHHHHTTSEEEECCSCCSSSEEEEEECS--SCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEET---
T ss_pred HHHHHhccceeEeeccCCCCCeEEEEECC--CCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecC---
Confidence 34556678988888998999999999754 6789999987532233346889999999984 67788898886543
Q ss_pred CCccceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhC---------------------
Q 039533 699 GNDFKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHD--------------------- 757 (949)
Q Consensus 699 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~--------------------- 757 (949)
...++||||++|.++.+.+.. ......++.+++++++.||+.
T Consensus 83 --~~~~lv~e~i~G~~l~~~~~~---------------~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~ 145 (263)
T 3tm0_A 83 --GWSNLLMSEADGVLCSEEYED---------------EQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYL 145 (263)
T ss_dssp --TEEEEEEECCSSEEHHHHCCT---------------TTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHH
T ss_pred --CceEEEEEecCCeehhhccCC---------------cccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHH
Confidence 367999999999999876420 112346889999999999981
Q ss_pred -----------------------------------CCCCeEecCCCCCCeeecCCCceEEeeccccee
Q 039533 758 -----------------------------------CQPVTAHCDLKPSNVLLDDYMTARVGDFGLARI 790 (949)
Q Consensus 758 -----------------------------------~~~~ivHrDlkp~NIll~~~~~~kl~DfG~a~~ 790 (949)
..+.++|||++|.||+++++..+.|+||+.+..
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~~ 213 (263)
T 3tm0_A 146 LNNDLADVDCENWEEDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSGR 213 (263)
T ss_dssp HHTTCSCCSGGGGSTTCSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCEE
T ss_pred HhccccccccccccccccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhccc
Confidence 014699999999999998765667999998753
No 405
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.20 E-value=6.7e-14 Score=155.28 Aligned_cols=88 Identities=17% Similarity=0.157 Sum_probs=43.4
Q ss_pred ccccccceeeecccccccc----CCcccccccchhhcccCccccccc----cCCCcCCCCCCCEEECCCCcCCCcCcccc
Q 039533 436 GKLKILEFLYVYENRLEGE----IPSTFGNCIRLEQLGMGGNLFQGP----ISSSLGSLRGLRVLDLSQNNLSGEIPKFL 507 (949)
Q Consensus 436 ~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~l~~N~l~~~----~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 507 (949)
..+++|++|+|++|+|+.. ++..+..+++|+.|+|++|.|+.. ++..+...++|+.|||++|.|+..-...+
T Consensus 180 ~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~l~~~L~~~~~L~~L~Ls~N~i~~~g~~~L 259 (372)
T 3un9_A 180 AGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALALARAAREHPSLELLHLYFNELSSEGRQVL 259 (372)
T ss_dssp HTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHHHHHHHHHCSSCCEEECTTSSCCHHHHHHH
T ss_pred hcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHHHHHHHHhCCCCCEEeccCCCCCHHHHHHH
Confidence 3344455555555554421 133344455566666666655532 33344456778888888888875443333
Q ss_pred cCC---c---cceEe--CCCCcCc
Q 039533 508 AGL---S---LNNLN--LSYNDLE 523 (949)
Q Consensus 508 ~~~---~---L~~l~--ls~N~l~ 523 (949)
... . ++.+. +..|.++
T Consensus 260 ~~~~~~~~~~L~~l~~ll~~~~~~ 283 (372)
T 3un9_A 260 RDLGGAAEGGARVVVSLTEGTAVS 283 (372)
T ss_dssp HHCC------CEEECCCC----CH
T ss_pred HHHhcCCCccchhhHhhhcCCccC
Confidence 221 1 55555 5555554
No 406
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=99.17 E-value=7.2e-10 Score=124.52 Aligned_cols=115 Identities=10% Similarity=0.119 Sum_probs=74.9
Q ss_pred eccccCCcccCcc-cCcEEeeccccccCcCCCCCCCCccceeecCCCcc---ccccccccccCCCCCcEEECCCCCCCCC
Q 039533 101 FTHEIPSEIGGLR-RLKVLALNNNSICGEIPTNISRCSTLIPIHPQNNQ---LVGKILSRFSSLSKTEILNLGSNHLTGS 176 (949)
Q Consensus 101 l~~~~p~~~~~l~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~---l~~~~~~~~~~L~~L~~L~Ls~N~l~~~ 176 (949)
++..-..+|.++. .|+.+.+..+ ++..-...|.+|++|+.+.+..|. ++.+...+|.+..+|+.+.+.++ ++..
T Consensus 51 Vt~Ig~~aF~~~~~~L~sI~iP~s-vt~Ig~~AF~~C~~L~~i~~~~n~p~~l~~Ig~~aF~~c~~L~~i~~~~~-~~~I 128 (394)
T 4gt6_A 51 VSKIGDRVFCNYKYVLTSVQIPDT-VTEIGSNAFYNCTSLKRVTIQDNKPSCVKKIGRQAFMFCSELTDIPILDS-VTEI 128 (394)
T ss_dssp EEEECTTTTTTCCSCCCEEEECTT-CCEECTTTTTTCTTCCEEEEGGGCCCCCCEECTTTTTTCTTCCBCGGGTT-CSEE
T ss_pred eeEcCHhhccCCCCcCEEEEECCC-eeEEhHHHhhCCccCceEeecCCCCCeeeEechhhchhcccceeeccCCc-ccee
Confidence 3433445787774 5888888754 554445678888888888877664 55566677777777777766554 3434
Q ss_pred CCCCcCCCCCccEEeccccccCCCCCCcccCCCccccccccC
Q 039533 177 IPSSLGNLSSIHTISLAYNNLDGTIPNSFGWFENLVFLSLAA 218 (949)
Q Consensus 177 ~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~ 218 (949)
....|..+.+|+.+.+..+ +......+|....+|+.+.+..
T Consensus 129 ~~~aF~~c~~L~~i~lp~~-~~~I~~~~F~~c~~L~~i~~~~ 169 (394)
T 4gt6_A 129 DSEAFHHCEELDTVTIPEG-VTSVADGMFSYCYSLHTVTLPD 169 (394)
T ss_dssp CTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEECCT
T ss_pred hhhhhhhhcccccccccce-eeeecccceecccccccccccc
Confidence 4456777777777777543 3334555666677777666654
No 407
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=98.96 E-value=5.6e-10 Score=117.71 Aligned_cols=139 Identities=19% Similarity=0.065 Sum_probs=97.9
Q ss_pred hcCCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCCcchHHHHHHHHHHHhcCCCc--ceeEEeeeecccccCCcc
Q 039533 625 TSGFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHGASRSFIAECKALKSIRHRN--LVKVLTACLGADYRGNDF 702 (949)
Q Consensus 625 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n--iv~~~~~~~~~~~~~~~~ 702 (949)
..+|.+....+.|..+.||++... +|+.+++|+.... ....+.+|+++++.+.+.+ +++++++.... ..
T Consensus 19 ~~~~~~~~~~~gg~~~~v~~~~~~-~g~~~vlK~~~~~---~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~-----~~ 89 (264)
T 1nd4_A 19 LFGYDWAQQTIGCSDAAVFRLSAQ-GRPVLFVKTDLSG---ALNELQDEAARLSWLATTGVPCAAVLDVVTEA-----GR 89 (264)
T ss_dssp TTTCEEEECSCTTSSCEEEEEECT-TSCCEEEEEECSC---TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECS-----SC
T ss_pred cCCCceEecccCCCCceEEEEecC-CCCeEEEEeCCcc---cchhhhHHHHHHHHHHhCCCCCCeEEEeccCC-----CC
Confidence 344544333345566999999754 5678999997543 2346788999999985444 55677775433 35
Q ss_pred ceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCC------------------------
Q 039533 703 KASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDC------------------------ 758 (949)
Q Consensus 703 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~------------------------ 758 (949)
.++||||++|.++. ... . ....++.++++.++.||+..
T Consensus 90 ~~~v~e~i~G~~l~--~~~-------------~---~~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (264)
T 1nd4_A 90 DWLLLGEVPGQDLL--SSH-------------L---APAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAG 151 (264)
T ss_dssp EEEEEECCSSEETT--TSC-------------C---CHHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTT
T ss_pred CEEEEEecCCcccC--cCc-------------C---CHhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcC
Confidence 79999999998884 220 1 12357788888888888641
Q ss_pred -------------------------------CCCeEecCCCCCCeeecCCCceEEeeccccee
Q 039533 759 -------------------------------QPVTAHCDLKPSNVLLDDYMTARVGDFGLARI 790 (949)
Q Consensus 759 -------------------------------~~~ivHrDlkp~NIll~~~~~~kl~DfG~a~~ 790 (949)
...++|||++|+||++++++.+.|+|||.+..
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~~ 214 (264)
T 1nd4_A 152 LVDQDDLDEEHQGLAPAELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGV 214 (264)
T ss_dssp CCCTTSCCGGGTTCCHHHHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCEE
T ss_pred CccchhhhhhccCccHHHHHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhccc
Confidence 12399999999999998876677999998754
No 408
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.94 E-value=2.1e-12 Score=134.27 Aligned_cols=147 Identities=15% Similarity=0.164 Sum_probs=66.6
Q ss_pred cceeeeeEEeCCCCcEEEEEcCC---CCCCccccC-CCCCCCCCceeeccCceeccccCC-cccCcccCcE--Eeecccc
Q 039533 52 FCKWYGVTCSRRHQRVTLLDLRS---LKLAGSVSH-FIGNLSFLKQLYLQVNSFTHEIPS-EIGGLRRLKV--LALNNNS 124 (949)
Q Consensus 52 ~C~w~gv~C~~~~~~v~~l~l~~---~~l~g~~~~-~l~~l~~L~~L~L~~n~l~~~~p~-~~~~l~~L~~--L~Ls~N~ 124 (949)
.|+|.|+.|+..+.+|+.+-..+ ..++|.+.+ .+..++. .|...+|.-++.++- .|...+.|+. ++++.|.
T Consensus 77 l~~~~g~i~~~~~~ki~~~v~~~~~~~~~~~~l~~~~~~~Lk~--~l~~ryn~~~~~LdLs~l~~dp~L~~~~l~l~~N~ 154 (267)
T 3rw6_A 77 LKAVNYKILDRENRRISIIINSSAPPHTILNELKPEQVEQLKL--IMSKRYDGSQQALDLKGLRSDPDLVAQNIDVVLNR 154 (267)
T ss_dssp HHHTTSSCBCTTSCBCCCEEEECCCCHHHHTSCCHHHHHHHHH--HHHHTEETTTTEEECTTGGGCHHHHHTTCCCCTTS
T ss_pred HHhcCcEEECCCCCEEEEEEecCCCcccccccCCHHHHHHHHH--HHHhccchhccccCHHHcCCCcchhhcCccccCCH
Confidence 58999999998777887666554 233333321 1111111 122233333332221 2334444444 4455553
Q ss_pred cc---CcCCCCCCCCccceeecCCCccccc--cccccccCCCCCcEEECCCCCCCCCCCCCcCCCC--CccEEecccccc
Q 039533 125 IC---GEIPTNISRCSTLIPIHPQNNQLVG--KILSRFSSLSKTEILNLGSNHLTGSIPSSLGNLS--SIHTISLAYNNL 197 (949)
Q Consensus 125 l~---~~~p~~~~~l~~L~~L~l~~n~l~~--~~~~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~--~L~~L~L~~N~l 197 (949)
.. +.++....++++|+.|+|++|+|++ .++..+..+++|+.|+|++|+|++. ..+..+. +|++|+|++|.+
T Consensus 155 ~~~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl 232 (267)
T 3rw6_A 155 RSCMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSL 232 (267)
T ss_dssp HHHHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTT
T ss_pred HHHHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcC
Confidence 22 1111111234444444444444444 2234444555555555555555533 1222222 555555555555
Q ss_pred CCCCC
Q 039533 198 DGTIP 202 (949)
Q Consensus 198 ~~~~p 202 (949)
.+.+|
T Consensus 233 ~~~~~ 237 (267)
T 3rw6_A 233 CDTFR 237 (267)
T ss_dssp GGGCS
T ss_pred ccccC
Confidence 54443
No 409
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=98.89 E-value=6.5e-08 Score=107.91 Aligned_cols=125 Identities=7% Similarity=-0.046 Sum_probs=61.3
Q ss_pred CCCCCCCceeeccCceeccccCCcccCcccCcEEeeccccccCcCCCCCCCCccceeecCCCccccccccccccCCCCCc
Q 039533 85 IGNLSFLKQLYLQVNSFTHEIPSEIGGLRRLKVLALNNNSICGEIPTNISRCSTLIPIHPQNNQLVGKILSRFSSLSKTE 164 (949)
Q Consensus 85 l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~L~~L~ 164 (949)
+..-.+|+.+.+.. .++..-..+|.+|++|+.++|..+ ++..-...|.++ +|+.+.+..+ ++.+...+|... +|+
T Consensus 42 ~~~~~~i~~v~ip~-~vt~Ig~~aF~~C~~L~~I~lp~~-v~~Ig~~aF~~c-~l~~i~~~~~-l~~I~~~aF~~~-~L~ 116 (379)
T 4h09_A 42 YKDRDRISEVRVNS-GITSIGEANFNSCYNMTKVTVAST-VTSIGDGAFADT-KLQSYTGMER-VKKFGDYVFQGT-DLD 116 (379)
T ss_dssp GGGGGGCSEEEECT-TEEEECTTTTTTCTTCCEEEECTT-CCEECTTTTTTC-CCCEEEECTT-CCEECTTTTTTC-CCS
T ss_pred cccccCCEEEEeCC-CccChHHHHhhCCCCCCEEEeCCc-ceEechhhhcCC-CCceEECCce-eeEeccceeccC-Ccc
Confidence 44456677777753 355444557778888888887644 542333455555 4555554432 333444445442 566
Q ss_pred EEECCCCCCCCCCCCCcCCCCCccEEeccccccCCCCCCcccCCCcccccccc
Q 039533 165 ILNLGSNHLTGSIPSSLGNLSSIHTISLAYNNLDGTIPNSFGWFENLVFLSLA 217 (949)
Q Consensus 165 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls 217 (949)
.+.+..+... .....|.+. +|+.+.+..+ ++......|....+++...+.
T Consensus 117 ~i~lp~~~~~-i~~~~F~~~-~l~~~~~~~~-v~~i~~~~f~~~~~l~~~~~~ 166 (379)
T 4h09_A 117 DFEFPGATTE-IGNYIFYNS-SVKRIVIPKS-VTTIKDGIGYKAENLEKIEVS 166 (379)
T ss_dssp EEECCTTCCE-ECTTTTTTC-CCCEEEECTT-CCEECSCTTTTCTTCCEEEEC
T ss_pred cccCCCcccc-ccccccccc-eeeeeeccce-eeccccchhcccccccccccc
Confidence 6666544221 222333332 3444443322 222333444444444444433
No 410
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.89 E-value=6.8e-10 Score=119.93 Aligned_cols=190 Identities=19% Similarity=0.190 Sum_probs=123.9
Q ss_pred CCeeeeecCceEEEEEEcCCCEEEEEEEEecCCCcchHHHHHHHHHHHhcC-CCc--ceeEEeeeecccccCCccceeEe
Q 039533 631 ANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHGASRSFIAECKALKSIR-HRN--LVKVLTACLGADYRGNDFKASVY 707 (949)
Q Consensus 631 ~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~n--iv~~~~~~~~~~~~~~~~~~lv~ 707 (949)
.+.++.|....||++. ..+++|+.... .....+.+|+++++.+. +.. +.+++......+ .....++||
T Consensus 25 i~~~~~G~~n~v~~v~-----~~~vlR~~~~~--~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~--~~~~~~~vm 95 (304)
T 3sg8_A 25 IEISGEGNDCIAYEIN-----RDFIFKFPKHS--RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSE--TYQMSFAGF 95 (304)
T ss_dssp CCEEEECSSEEEEEST-----TSEEEEEESSH--HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCS--SCSCSCEEE
T ss_pred eEecCCCCcceEEEEC-----CEEEEEecCCc--chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCC--CCCcceEEE
Confidence 5679999999999874 34889986422 23467889999999883 333 445544432111 112358899
Q ss_pred eeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhC------------------------------
Q 039533 708 EFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHD------------------------------ 757 (949)
Q Consensus 708 e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~------------------------------ 757 (949)
++++|.++.+... ..++..++..++.++++.++.||+.
T Consensus 96 ~~i~G~~l~~~~~------------~~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (304)
T 3sg8_A 96 TKIKGVPLTPLLL------------NNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSR 163 (304)
T ss_dssp ECCCCEECCHHHH------------HTSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTT
T ss_pred cccCCeECCcccc------------ccCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcc
Confidence 9999988765321 2367778888889999999888861
Q ss_pred -------------------------CCCCeEecCCCCCCeeecC--CCceEEeecccceecCCCCCcccccc--------
Q 039533 758 -------------------------CQPVTAHCDLKPSNVLLDD--YMTARVGDFGLARILSPDHTQTSSFS-------- 802 (949)
Q Consensus 758 -------------------------~~~~ivHrDlkp~NIll~~--~~~~kl~DfG~a~~~~~~~~~~~~~~-------- 802 (949)
..+.++|+|++|.||++++ +..+.|+||+.+....+.........
T Consensus 164 ~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~Dl~~~~~~~~~~~~~ 243 (304)
T 3sg8_A 164 ELKGPQMKKVDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFISLMEDDEEYGME 243 (304)
T ss_dssp TSCHHHHHHHHHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHHHHTTCCTTTSCCHH
T ss_pred cCCcccHHHHHHHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHHHHHHHhhccccCHH
Confidence 1246899999999999998 55678999999876533211110000
Q ss_pred ----ccCccCccC-ccccCCCccCCccchHHHHHHHHHHHhCCCCC
Q 039533 803 ----VKGSLGYIA-PEYGVGCEVSTNGDVYSYGILLLELVIGKKPI 843 (949)
Q Consensus 803 ----~~gt~~y~a-PE~~~~~~~~~~sDiwSlGvvl~elltg~~Pf 843 (949)
....+++.. |+... ......+.|++|.++|.+.+|..+|
T Consensus 244 ~~~~~l~~Y~~~~~~~~~~--r~~~~~~~~~l~~~~~~~~~g~~~~ 287 (304)
T 3sg8_A 244 FVSKILNHYKHKDIPTVLE--KYRMKEKYWSFEKIIYGKEYGYMDW 287 (304)
T ss_dssp HHHHHHHHHTCSCHHHHHH--HHHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHcCCCCcHHHHH--HHHHHHHHHHHHHHHHHHHcCCHHH
Confidence 000011111 22111 1122368999999999999999886
No 411
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=98.87 E-value=6.3e-09 Score=115.25 Aligned_cols=146 Identities=13% Similarity=0.119 Sum_probs=106.9
Q ss_pred CCCeeeeecCceEEEEEEcCCCEEEEEEEEe--cCCC-cchHHHHHHHHHHHhcC--CCcceeEEeeeecccccCCccce
Q 039533 630 SANLVGVGSFGSVYKGIIDEGRTTIAVKVFN--LQHH-GASRSFIAECKALKSIR--HRNLVKVLTACLGADYRGNDFKA 704 (949)
Q Consensus 630 ~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~--~~~~-~~~~~~~~E~~~l~~l~--h~niv~~~~~~~~~~~~~~~~~~ 704 (949)
..+.++.|.++.||++... +..+++|+.. .... .....+.+|+++++.+. +..+++++.++.+.. .....+
T Consensus 42 ~~~~l~~G~sn~~y~v~~~--~~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~--~~g~~~ 117 (359)
T 3dxp_A 42 SVEQFKGGQSNPTFKLVTP--GQTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDES--VIGRAF 117 (359)
T ss_dssp EEEECCC-CCSCEEEEECS--SCEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTT--TTSSCE
T ss_pred eEEEcCCcccceEEEEEEC--CceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCC--ccCCeE
Confidence 3567899999999999875 4578888765 3221 12346788999999996 456888888875442 113578
Q ss_pred eEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCC--------------------------
Q 039533 705 SVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDC-------------------------- 758 (949)
Q Consensus 705 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~-------------------------- 758 (949)
+||||++|..+.+... ..++..++..++.++++.|+.||+..
T Consensus 118 ~vme~v~G~~l~~~~~------------~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (359)
T 3dxp_A 118 YIMEFVSGRVLWDQSL------------PGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQ 185 (359)
T ss_dssp EEEECCCCBCCCCTTC------------TTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHH
T ss_pred EEEEecCCeecCCCcc------------ccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHH
Confidence 9999999977754221 23678888999999999999999731
Q ss_pred -----------------------------CCCeEecCCCCCCeeecCCCc--eEEeecccceec
Q 039533 759 -----------------------------QPVTAHCDLKPSNVLLDDYMT--ARVGDFGLARIL 791 (949)
Q Consensus 759 -----------------------------~~~ivHrDlkp~NIll~~~~~--~kl~DfG~a~~~ 791 (949)
.+.++|||++|.||+++.++. +.|+||+.+..-
T Consensus 186 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~g 249 (359)
T 3dxp_A 186 YKLSETESIPAMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTLG 249 (359)
T ss_dssp HHHHCCSCCHHHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEEE
T ss_pred HHhcCCcCChHHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECccccccC
Confidence 257999999999999997653 689999998753
No 412
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.85 E-value=3.3e-10 Score=124.35 Aligned_cols=102 Identities=12% Similarity=0.164 Sum_probs=66.9
Q ss_pred CcEEEEEcCCCCCCc-c-------ccCCCCCCCCCceeeccCceec---------cccCCcccCcccCcEEeeccccccC
Q 039533 65 QRVTLLDLRSLKLAG-S-------VSHFIGNLSFLKQLYLQVNSFT---------HEIPSEIGGLRRLKVLALNNNSICG 127 (949)
Q Consensus 65 ~~v~~l~l~~~~l~g-~-------~~~~l~~l~~L~~L~L~~n~l~---------~~~p~~~~~l~~L~~L~Ls~N~l~~ 127 (949)
.+|+.|.+...+..| . +..++..+++|+.|.+..+... +.++..+..+++|+.|+|++|.-.
T Consensus 107 ~~v~~L~lg~~~~~~~~~~~~~~~L~~s~~~l~~L~~L~l~~~~~e~~~is~~~~~~L~~ll~~~P~L~~L~L~g~~~l- 185 (362)
T 2ra8_A 107 PSLKQITIGXWGYEGEDCSDIADGIVENKEKFAHFEGLFWGDIDFEEQEISWIEQVDLSPVLDAMPLLNNLKIKGTNNL- 185 (362)
T ss_dssp GGCSEEEECCCCSSSCCSHHHHHHHHTTHHHHTTCSEEEECCCCTTTCCGGGCBCCBCHHHHHTCTTCCEEEEECCBTC-
T ss_pred hhcceEEEcccccCCCcHHHHHHHHHHhhhhcchhhheeecCcchhhcccccccccCHHHHHhcCCCCcEEEEeCCCCc-
Confidence 468888888776653 2 2445667889999998765431 124445667789999999887311
Q ss_pred cCCCCCCCCccceeecCCCcccccccccccc--CCCCCcEEECC
Q 039533 128 EIPTNISRCSTLIPIHPQNNQLVGKILSRFS--SLSKTEILNLG 169 (949)
Q Consensus 128 ~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~--~L~~L~~L~Ls 169 (949)
.+|. +. +++|+.|++..+.+.......+. .+++|+.|+|+
T Consensus 186 ~l~~-~~-~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~ 227 (362)
T 2ra8_A 186 SIGK-KP-RPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLY 227 (362)
T ss_dssp BCCS-CB-CTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEE
T ss_pred eecc-cc-CCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEe
Confidence 2333 33 67788888777777655544544 67777777775
No 413
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.83 E-value=4e-10 Score=123.72 Aligned_cols=85 Identities=15% Similarity=0.255 Sum_probs=55.5
Q ss_pred cccccceeeeccccccccCCcccc---cccchhhcccCccccccc----cCCCcCCCCCCCEEECCCCcCCCcCcccccC
Q 039533 437 KLKILEFLYVYENRLEGEIPSTFG---NCIRLEQLGMGGNLFQGP----ISSSLGSLRGLRVLDLSQNNLSGEIPKFLAG 509 (949)
Q Consensus 437 ~l~~L~~L~Ls~N~l~~~~p~~~~---~l~~L~~L~l~~N~l~~~----~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 509 (949)
.+++|+.|+|++|.+....+..+. .+++|+.|+|+.|.|++. ++..+..+++|+.|+|++|.|+...-..+..
T Consensus 250 ~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~d~~~~~l~~ 329 (362)
T 2ra8_A 250 RFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLSDEMKKELQK 329 (362)
T ss_dssp TCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCCHHHHHHHHH
T ss_pred CCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCCHHHHHHHHH
Confidence 457788888888777644333332 467888888888887753 4445556788999999998887543333332
Q ss_pred CccceEeCCCCc
Q 039533 510 LSLNNLNLSYND 521 (949)
Q Consensus 510 ~~L~~l~ls~N~ 521 (949)
.-...+++++|+
T Consensus 330 alg~~~~~~~~~ 341 (362)
T 2ra8_A 330 SLPMKIDVSDSQ 341 (362)
T ss_dssp HCCSEEECCSBC
T ss_pred HcCCEEEecCCc
Confidence 113457888776
No 414
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=98.78 E-value=2.2e-07 Score=103.65 Aligned_cols=134 Identities=13% Similarity=0.156 Sum_probs=68.2
Q ss_pred CCcccccCCCCEEecCCcccccccCcccccccccceeecccccccccCCCCCCCCCCCcEEEeeCccccCCCCCcccCCc
Q 039533 335 PPAIGELQNLKILGLNRNKLSGNIPPSIGNLKMLLNLFLNDNFLEVSIPSSLGQCESLIEINLSNNNLSGTIPPQFFSLS 414 (949)
Q Consensus 335 p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~ 414 (949)
...+....+|+.+.+..+ +.......|.++..|+.+.+..+ ++..-..+|.++.+|+.+.+..+
T Consensus 210 ~~~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-------------- 273 (379)
T 4h09_A 210 AYGFSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-------------- 273 (379)
T ss_dssp TTTTTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC--------------
T ss_pred ecccccccccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceeehhcccccccc--------------
Confidence 344444555555555433 22233344445555555555443 33333444455555555444322
Q ss_pred ccceeeccCCCccCCCCccccccccccceeeeccccccccCCcccccccchhhcccCccccccccCCCcCCCCCCCEEEC
Q 039533 415 SLSISLDWSRNKLTGSLPIEVGKLKILEFLYVYENRLEGEIPSTFGNCIRLEQLGMGGNLFQGPISSSLGSLRGLRVLDL 494 (949)
Q Consensus 415 ~l~~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L 494 (949)
++......|.++.+|+.+.+.++.++..-...|.+|.+|+.+.|..+ ++..-..+|.++++|+.+.+
T Consensus 274 ------------i~~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~i 340 (379)
T 4h09_A 274 ------------VKTVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA-LKTIQVYAFKNCKALSTISY 340 (379)
T ss_dssp ------------CSEECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCCCCC
T ss_pred ------------ceeccccccccccccccccccccccceehhhhhcCCCCCCEEEcCcc-ccEEHHHHhhCCCCCCEEEE
Confidence 22233344555666666666666665444556666666666666543 44444556666666666666
Q ss_pred CCC
Q 039533 495 SQN 497 (949)
Q Consensus 495 s~N 497 (949)
..+
T Consensus 341 p~~ 343 (379)
T 4h09_A 341 PKS 343 (379)
T ss_dssp CTT
T ss_pred CCc
Confidence 543
No 415
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.48 E-value=5.9e-07 Score=97.40 Aligned_cols=138 Identities=16% Similarity=0.138 Sum_probs=101.9
Q ss_pred CCCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCCcchHHHHHHHHHHHhcCC----CcceeEEeeeecccccCCcc
Q 039533 627 GFSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHGASRSFIAECKALKSIRH----RNLVKVLTACLGADYRGNDF 702 (949)
Q Consensus 627 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h----~niv~~~~~~~~~~~~~~~~ 702 (949)
.....+.++.|....||++ +..+++|+.... .....+.+|.++++.+.+ ..+++++++ + .
T Consensus 38 ~i~~v~~l~~G~~n~vy~v-----g~~~vlR~~~~~--~~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~----~-----~ 101 (320)
T 3r70_A 38 KINELRYLSSGDDSDTFLC-----NEQYVVKVPKRD--SVRISQKRELELYRFLENCKLSYQIPAVVYQ----S-----D 101 (320)
T ss_dssp CCSCEEEEEECSSEEEEEE-----TTTEEEEEESSH--HHHHHHHHHHHHHHHHTTSCCSSBCCCEEEE----C-----S
T ss_pred ceEEEEeCCCCCCceEEEE-----CCEEEEEeCCcH--HHHHHHHHHHHHHHHHHhcCCCCCcceEEec----C-----C
Confidence 5566778999999999998 456888876321 224568899999999865 234555544 1 4
Q ss_pred ceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCC------------------------
Q 039533 703 KASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDC------------------------ 758 (949)
Q Consensus 703 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~------------------------ 758 (949)
.++||||++|.++.+... ..++..++..++.++++.++.||+..
T Consensus 102 ~~lvme~i~G~~l~~~~~------------~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (320)
T 3r70_A 102 RFNIMKYIKGERITYEQY------------HKLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKK 169 (320)
T ss_dssp SCEEEECCCCBCCCHHHH------------TTSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHH
T ss_pred cEEEEeecCCcccccccc------------ccCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHH
Confidence 689999999988864321 23566777788888888888888542
Q ss_pred ------------------------------------CCCeEecCCCCCCeeecCCCceEEeecccceecC
Q 039533 759 ------------------------------------QPVTAHCDLKPSNVLLDDYMTARVGDFGLARILS 792 (949)
Q Consensus 759 ------------------------------------~~~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~ 792 (949)
.+.++|+|++|.||+++++..+.|+||+.+....
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~~~ 239 (320)
T 3r70_A 170 LLISILEKEQLLTDEMLEHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNVGD 239 (320)
T ss_dssp HHHHHHHHTTCCCHHHHHHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEEEC
T ss_pred HHHHHHhhcccccccchHHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCcccccCC
Confidence 1245999999999999997667999999987643
No 416
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.45 E-value=5e-09 Score=103.71 Aligned_cols=122 Identities=13% Similarity=0.133 Sum_probs=66.2
Q ss_pred ccCCCCCCCCCceeeccCc-eeccc----cCCcccCcccCcEEeeccccccCcCCCCCCCCccceeecCCCccccccccc
Q 039533 81 VSHFIGNLSFLKQLYLQVN-SFTHE----IPSEIGGLRRLKVLALNNNSICGEIPTNISRCSTLIPIHPQNNQLVGKILS 155 (949)
Q Consensus 81 ~~~~l~~l~~L~~L~L~~n-~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~ 155 (949)
+...+...+.|++|+|++| .+... +...+...++|++|+|++|.|...-.. .+..
T Consensus 28 l~~~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~--------------------~l~~ 87 (185)
T 1io0_A 28 LKRIQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAF--------------------ALAE 87 (185)
T ss_dssp HHHHHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHH--------------------HHHH
T ss_pred HHHHHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHH--------------------HHHH
Confidence 4445566677777777777 66532 344455566777777777776532111 1122
Q ss_pred cccCCCCCcEEECCCCCCCCC----CCCCcCCCCCccEEec--cccccCCC----CCCcccCCCccccccccCcccc
Q 039533 156 RFSSLSKTEILNLGSNHLTGS----IPSSLGNLSSIHTISL--AYNNLDGT----IPNSFGWFENLVFLSLAANNLS 222 (949)
Q Consensus 156 ~~~~L~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~L--~~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~ 222 (949)
.+...++|++|+|++|.|+.. +...+...++|++|+| ++|.|+.. +...+...++|++|+|++|.+.
T Consensus 88 ~L~~n~~L~~L~L~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 88 MLKVNNTLKSLNVESNFISGSGILALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HHHHCSSCCEEECCSSCCCHHHHHHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHHhCCCcCEEECcCCcCCHHHHHHHHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 233344555555555555522 2334445555666666 55665532 2233444466777777766654
No 417
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.39 E-value=2.2e-08 Score=103.99 Aligned_cols=106 Identities=17% Similarity=0.208 Sum_probs=75.7
Q ss_pred CCCCCCCce--eeccCcee---ccccCCcccCcccCcEEeeccccccC--cCCCCCCCCccceeecCCCcccccc-cccc
Q 039533 85 IGNLSFLKQ--LYLQVNSF---THEIPSEIGGLRRLKVLALNNNSICG--EIPTNISRCSTLIPIHPQNNQLVGK-ILSR 156 (949)
Q Consensus 85 l~~l~~L~~--L~L~~n~l---~~~~p~~~~~l~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~l~~n~l~~~-~~~~ 156 (949)
+...+.|.. ++++.|.. .+.++-...++++|+.|+|++|+|++ .+|..+..+++|+.|+|++|+|.+. ....
T Consensus 137 l~~dp~L~~~~l~l~~N~~~~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~~~l~~ 216 (267)
T 3rw6_A 137 LRSDPDLVAQNIDVVLNRRSCMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSERELDK 216 (267)
T ss_dssp GGGCHHHHHTTCCCCTTSHHHHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSGGGGGG
T ss_pred cCCCcchhhcCccccCCHHHHHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCchhhhh
Confidence 444555655 67777743 33333333568899999999999987 5667778899999999999999876 2333
Q ss_pred ccCCCCCcEEECCCCCCCCCCCC-------CcCCCCCccEEe
Q 039533 157 FSSLSKTEILNLGSNHLTGSIPS-------SLGNLSSIHTIS 191 (949)
Q Consensus 157 ~~~L~~L~~L~Ls~N~l~~~~p~-------~~~~l~~L~~L~ 191 (949)
+..+ +|++|+|++|.+.+.+|. .+..+++|+.||
T Consensus 217 l~~l-~L~~L~L~~Npl~~~~~~~~~y~~~il~~~P~L~~LD 257 (267)
T 3rw6_A 217 IKGL-KLEELWLDGNSLCDTFRDQSTYISAIRERFPKLLRLD 257 (267)
T ss_dssp GTTS-CCSEEECTTSTTGGGCSSHHHHHHHHHHHCTTCCEES
T ss_pred cccC-CcceEEccCCcCccccCcchhHHHHHHHHCcccCeEC
Confidence 4444 999999999999987663 245666676665
No 418
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.35 E-value=1.3e-06 Score=92.29 Aligned_cols=145 Identities=17% Similarity=0.075 Sum_probs=102.2
Q ss_pred HHhcCCCCCCeeeeecCc-eEEEEEEcCCCEEEEEEEEecCCCcchHHHHHHHHHHHhcC-CCcceeEEeeeecccccCC
Q 039533 623 NATSGFSSANLVGVGSFG-SVYKGIIDEGRTTIAVKVFNLQHHGASRSFIAECKALKSIR-HRNLVKVLTACLGADYRGN 700 (949)
Q Consensus 623 ~~~~~y~~~~~lg~G~~g-~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~ 700 (949)
....+|+. +.+..|..+ .||+.....++..+++|+.... ....+.+|.+.++.+. +--+.++++++.+.+
T Consensus 22 ~~l~g~~~-~~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~---~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~---- 93 (272)
T 4gkh_A 22 ADLYGYRW-ARDNVGQSGATIYRLYGKPNAPELFLKHGKGS---VANDVTDEMVRLNWLTAFMPLPTIKHFIRTPD---- 93 (272)
T ss_dssp HHHTTCEE-EEEECSSSSCEEEEEECCTTCCCEEEEEEETH---HHHHHHHHHHHHHHHTTTSCCCCEEEEEEETT----
T ss_pred ccccCCeE-EEccCCCcCCeEEEEEecCCCeEEEEEECCCC---CHhHHHHHHHHHHHhccCCCcCeEEEEEEECC----
Confidence 33344543 345556665 6999888777888999986532 3456888999998884 334777887765443
Q ss_pred ccceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCC----------------------
Q 039533 701 DFKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDC---------------------- 758 (949)
Q Consensus 701 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~---------------------- 758 (949)
..++|||+++|.++.+.... .......++.++++.|+.||+..
T Consensus 94 -~~~lvme~l~G~~~~~~~~~--------------~~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (272)
T 4gkh_A 94 -DAWLLTTAIPGKTAFQVLEE--------------YPDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMN 158 (272)
T ss_dssp -EEEEEEECCCSEEHHHHHHH--------------CGGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHH
T ss_pred -eEEEEEEeeCCccccccccC--------------CHHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHH
Confidence 67999999999888765431 11233456677777777777421
Q ss_pred ---------------------------------CCCeEecCCCCCCeeecCCCceEEeeccccee
Q 039533 759 ---------------------------------QPVTAHCDLKPSNVLLDDYMTARVGDFGLARI 790 (949)
Q Consensus 759 ---------------------------------~~~ivHrDlkp~NIll~~~~~~kl~DfG~a~~ 790 (949)
.+.++|+|+.+.||++++++.+-|+||+.+..
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~~ 223 (272)
T 4gkh_A 159 NGLVDASDFDDERNGWPVEQVWKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGI 223 (272)
T ss_dssp TTCCCGGGCCGGGTTCCHHHHHHHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred HhhhhhhhccccccchHHHHHHHHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECccccc
Confidence 22479999999999999877777999998764
No 419
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.34 E-value=2.7e-06 Score=90.28 Aligned_cols=76 Identities=14% Similarity=0.055 Sum_probs=60.0
Q ss_pred CCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCCcchHHHHHHHHHHHhcCCC---cceeEEeeeecccccCCccceeE
Q 039533 630 SANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHGASRSFIAECKALKSIRHR---NLVKVLTACLGADYRGNDFKASV 706 (949)
Q Consensus 630 ~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~---niv~~~~~~~~~~~~~~~~~~lv 706 (949)
..+.++.|.++.||+++.. +|+.++||+...........+..|++.++.+.+. .+++++++. ..++|
T Consensus 19 ~~~~l~gG~~n~vy~v~~~-dG~~~vvK~~~~~~~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~---------~~~lv 88 (288)
T 3d1u_A 19 AVAERGHSHRWHLYRVELA-DGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD---------DRTLA 88 (288)
T ss_dssp EEEEEEEETTEEEEEEEET-TSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE---------TTEEE
T ss_pred ceeeeCCcchhheEEEEeC-CCCeEEEEecCCCCcchhHHHHHHHHHHHHHHhcCCCCcCeEEEec---------CcEEE
Confidence 3568999999999999876 6788999996543333346789999999999765 577887652 36899
Q ss_pred eeeccCCCh
Q 039533 707 YEFMHYGSL 715 (949)
Q Consensus 707 ~e~~~~gsL 715 (949)
|||++++++
T Consensus 89 me~l~g~~~ 97 (288)
T 3d1u_A 89 MEWVDERPP 97 (288)
T ss_dssp EECCCCCCC
T ss_pred EEecccCCC
Confidence 999999875
No 420
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.30 E-value=2.6e-08 Score=98.56 Aligned_cols=127 Identities=13% Similarity=0.106 Sum_probs=87.2
Q ss_pred cCCcccCcccCcEEeeccc-cccCcCCCCCCCCccceeecCCCccccccccccccCCCCCcEEECCCCCCCCC----CCC
Q 039533 105 IPSEIGGLRRLKVLALNNN-SICGEIPTNISRCSTLIPIHPQNNQLVGKILSRFSSLSKTEILNLGSNHLTGS----IPS 179 (949)
Q Consensus 105 ~p~~~~~l~~L~~L~Ls~N-~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~L~~L~~L~Ls~N~l~~~----~p~ 179 (949)
+...+...++|++|+|++| .|...-- ..+...+...++|++|+|++|.|... +..
T Consensus 28 l~~~l~~~~~L~~L~L~~n~~i~~~g~--------------------~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~ 87 (185)
T 1io0_A 28 LKRIQNNDPDLEEVNLNNIMNIPVPTL--------------------KACAEALKTNTYVKKFSIVGTRSNDPVAFALAE 87 (185)
T ss_dssp HHHHHTTCTTCCEEECTTCTTCCHHHH--------------------HHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHH
T ss_pred HHHHHhcCCCCCEEEecCCCCCCHHHH--------------------HHHHHHHHhCCCcCEEECcCCCCChHHHHHHHH
Confidence 3445566677777777777 6653211 11234455667889999999998732 334
Q ss_pred CcCCCCCccEEeccccccCCC----CCCcccCCCccccccc--cCcccccccccccCCCCChhhhccccccccccCCCCC
Q 039533 180 SLGNLSSIHTISLAYNNLDGT----IPNSFGWFENLVFLSL--AANNLSVVENKLTGEVPSLEKLQRLQHFTITSNSLGS 253 (949)
Q Consensus 180 ~~~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~L--s~N~l~~~~~~l~~~~~~l~~l~~L~~L~l~~N~l~~ 253 (949)
.+...++|++|+|++|.|+.. +...+...++|++|+| ++|.|....... ....+...++|++|+|++|.++.
T Consensus 88 ~L~~n~~L~~L~L~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~--l~~~L~~n~~L~~L~L~~n~i~~ 165 (185)
T 1io0_A 88 MLKVNNTLKSLNVESNFISGSGILALVEALQSNTSLIELRIDNQSQPLGNNVEME--IANMLEKNTTLLKFGYHFTQQGP 165 (185)
T ss_dssp HHHHCSSCCEEECCSSCCCHHHHHHHHHGGGGCSSCCEEECCCCSSCCCHHHHHH--HHHHHHHCSSCCEEECCCSSHHH
T ss_pred HHHhCCCcCEEECcCCcCCHHHHHHHHHHHHhCCCceEEEecCCCCCCCHHHHHH--HHHHHHhCCCcCEEeccCCCCCh
Confidence 455668899999999999843 4567788889999999 889987432110 11135566889999999999864
No 421
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.28 E-value=3.8e-06 Score=90.28 Aligned_cols=137 Identities=18% Similarity=0.077 Sum_probs=94.1
Q ss_pred CCeeeeecCceEEEEEEcCCCEEEEEEEEecCCCcchHHHHHHHHHHHhcCCC---cceeEEeeeecccccCCccceeEe
Q 039533 631 ANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHGASRSFIAECKALKSIRHR---NLVKVLTACLGADYRGNDFKASVY 707 (949)
Q Consensus 631 ~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~---niv~~~~~~~~~~~~~~~~~~lv~ 707 (949)
.+.++.|....||+. +..+++|+.. .......+.+|+++++.+.+. .+.+++.++.. .....++||
T Consensus 24 v~~l~~G~~n~v~~v-----g~~~VlR~~~--~~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~----~~g~~~~v~ 92 (306)
T 3tdw_A 24 VESLGEGFRNYAILV-----NGDWVFRFPK--SQQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKR----SDGNPFVGY 92 (306)
T ss_dssp EEEEEECSSEEEEEE-----TTTEEEEEES--SHHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEEC----TTSCEEEEE
T ss_pred eeecCCCcceeEEEE-----CCEEEEEecC--CchHHHHHHHHHHHHHHHHhcCCCCCCCeEeeccc----CCCceEEEE
Confidence 356888888899988 3557888853 223346789999999999642 35666666531 123568999
Q ss_pred eeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhC------------------------------
Q 039533 708 EFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHD------------------------------ 757 (949)
Q Consensus 708 e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~------------------------------ 757 (949)
||++|.++.+... ..++..+...++.++++.|+.||+.
T Consensus 93 e~i~G~~l~~~~~------------~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~ 160 (306)
T 3tdw_A 93 RKVQGQILGEDGM------------AVLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQV 160 (306)
T ss_dssp ECCCSEECHHHHH------------TTSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHT
T ss_pred eccCCeECchhhh------------hhCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhc
Confidence 9999988866321 1134445555566666666665542
Q ss_pred ---------------------------CCCCeEecCCCCCCeeecC---CCc-eEEeeccccee
Q 039533 758 ---------------------------CQPVTAHCDLKPSNVLLDD---YMT-ARVGDFGLARI 790 (949)
Q Consensus 758 ---------------------------~~~~ivHrDlkp~NIll~~---~~~-~kl~DfG~a~~ 790 (949)
..+.++|+|++|.||+++. ++. +.|+||+.+..
T Consensus 161 ~~~l~~~~~~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~ 224 (306)
T 3tdw_A 161 FPLLDESLRDYLTLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAI 224 (306)
T ss_dssp GGGSCHHHHHHHHHHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEE
T ss_pred ccccchhhHHHHHHHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCC
Confidence 1346799999999999987 455 48999998865
No 422
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=98.12 E-value=1.1e-05 Score=88.85 Aligned_cols=152 Identities=12% Similarity=0.068 Sum_probs=91.3
Q ss_pred CCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCCcchHHHHHHHHHHHhcCCCc--ceeEEeeeecccccCCccceeEe
Q 039533 630 SANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHGASRSFIAECKALKSIRHRN--LVKVLTACLGADYRGNDFKASVY 707 (949)
Q Consensus 630 ~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n--iv~~~~~~~~~~~~~~~~~~lv~ 707 (949)
..+.++.|....+|+... +++.+++|+.... ..+..|+.+++.+.... +.++++++...+ ...++||
T Consensus 45 ~i~~l~gG~~n~~y~v~~--~g~~~vlK~~~~~-----~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~----g~~~lv~ 113 (362)
T 3ovc_A 45 DLMQLSEGEESRAFSFDV--GGRGYVLRVNSCA-----DGFYKDRYVYRHFASAALPIPEVLDIGEFSE----SLTYCIS 113 (362)
T ss_dssp EEEEEEECSSEEEEEEEE--TTEEEEEEEESCC-----HHHHHHHHHHHHHCCSSSCCCCEEEEEESSS----SCEEEEE
T ss_pred eEEECCCCCcceEEEEEE--CCcEEEEEeCCch-----hhHHHHHHHHHHHHhcCCCCceEEEeccCCC----CCeEEEE
Confidence 356789999999999886 4788999987432 35889999999986433 566666654321 3578999
Q ss_pred eeccCCChhhhc------------------CCCCCCC-----cccc--C---------------CCCCCHHHH------H
Q 039533 708 EFMHYGSLEEWL------------------HPFTGED-----EIDE--A---------------PRNLNLLQR------L 741 (949)
Q Consensus 708 e~~~~gsL~~~l------------------~~~~~~~-----~~~~--~---------------~~~l~~~~~------~ 741 (949)
||++|.++.+.- +...... .... . .....|... .
T Consensus 114 e~l~G~~l~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~gl~~~~~~~~~~~~~w~~~~~~~~~~~l~~~~~~~~~~~~~ 193 (362)
T 3ovc_A 114 RRAQGVTLQDLPETELPAVLQPVAEAMDAIAAADLSQTSGFGPFGPQGIGQYTTWRDFICAIADPHVYHWQTVMDDTVSA 193 (362)
T ss_dssp ECCCSEETTTSCGGGSGGGHHHHHHHHHHHHHCCCTTCBCEEEECTTSBEEESSHHHHHHGGGCTTTCCHHHHCCTTTHH
T ss_pred EecCCCCcccCCHHHHHHHHHHHHHHHHHHhcCCCccccCccCCCCCCCCccccHHHHHHHHHHHHHHHHHHHHhhcccc
Confidence 999987664320 1000000 0000 0 000011110 0
Q ss_pred HHHHHHHHHHHHHhhC-CCCCeEecCCCCCCeeecCCCceEEeecccceecC
Q 039533 742 NIAIDIAYALNYLHHD-CQPVTAHCDLKPSNVLLDDYMTARVGDFGLARILS 792 (949)
Q Consensus 742 ~i~~qi~~gL~~LH~~-~~~~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~ 792 (949)
.....+....+++... ..+.++|+|+.|.||++++++.+.|+||+.+..-.
T Consensus 194 ~~~~~~~~l~~~l~~lp~~~~l~HgDl~~~Nil~~~~~~~~viD~~~~~~gd 245 (362)
T 3ovc_A 194 SVAQALDELMLWAEDCPEVRHLVHADFGSNNVLTDNGRITAVIDWSEAMFGD 245 (362)
T ss_dssp HHHHHHHHHHHHGGGCCCCCEEECSSCSSTTEEEETTEEEEECCCTTCEEEC
T ss_pred cchHHHHHHHHHHhhCCCCcEEEeCCCCCCeEEEeCCCEEEEECCcccccCC
Confidence 1111222222233221 12578999999999999887778899999987643
No 423
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=98.00 E-value=1.1e-05 Score=88.88 Aligned_cols=84 Identities=6% Similarity=-0.067 Sum_probs=55.8
Q ss_pred Cee-eeecCceEEEEEEc---C---CCEEEEEEEEecCC---CcchHHHHHHHHHHHhcC-C--CcceeEEeeeeccccc
Q 039533 632 NLV-GVGSFGSVYKGIID---E---GRTTIAVKVFNLQH---HGASRSFIAECKALKSIR-H--RNLVKVLTACLGADYR 698 (949)
Q Consensus 632 ~~l-g~G~~g~Vy~~~~~---~---~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~-h--~niv~~~~~~~~~~~~ 698 (949)
+.| +.|....+|+.... . +++.+++|+..... ......+.+|+++++.+. + -.+.+++.++.+...
T Consensus 26 ~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~- 104 (357)
T 3ats_A 26 SGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDV- 104 (357)
T ss_dssp EEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTT-
T ss_pred EECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCc-
Confidence 566 78888999998753 1 15678999865322 111245788999888884 2 357778877643321
Q ss_pred CCccceeEeeeccCCChhh
Q 039533 699 GNDFKASVYEFMHYGSLEE 717 (949)
Q Consensus 699 ~~~~~~lv~e~~~~gsL~~ 717 (949)
....++||||++|.++.+
T Consensus 105 -~g~~~~v~e~l~G~~l~~ 122 (357)
T 3ats_A 105 -LGTPFFLMDYVEGVVPPD 122 (357)
T ss_dssp -TSSCEEEEECCCCBCCCB
T ss_pred -cCCceEEEEecCCCChhh
Confidence 124679999999887764
No 424
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=97.84 E-value=1.7e-05 Score=88.73 Aligned_cols=76 Identities=14% Similarity=0.059 Sum_probs=49.6
Q ss_pred CCeeeeecCceEEEEEEcCCCEEEEEEEEecCCC-------cchHHHHHHHHHHHhcCC--C-cceeEEeeeecccccCC
Q 039533 631 ANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHH-------GASRSFIAECKALKSIRH--R-NLVKVLTACLGADYRGN 700 (949)
Q Consensus 631 ~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-------~~~~~~~~E~~~l~~l~h--~-niv~~~~~~~~~~~~~~ 700 (949)
.+.+|.|..+.||++....+++.++||....... ....++..|.++++.+.. + .+++++.+. .
T Consensus 35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~d--~----- 107 (397)
T 2olc_A 35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYSD--T----- 107 (397)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEEE--T-----
T ss_pred EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEEc--C-----
Confidence 4678999999999997655567899998653211 123567889999988742 3 345565442 1
Q ss_pred ccceeEeeeccCC
Q 039533 701 DFKASVYEFMHYG 713 (949)
Q Consensus 701 ~~~~lv~e~~~~g 713 (949)
+..++||||+++.
T Consensus 108 ~~~~lvmE~l~g~ 120 (397)
T 2olc_A 108 EMAVTVMEDLSHL 120 (397)
T ss_dssp TTTEEEECCCTTS
T ss_pred CccEEEEEeCCCc
Confidence 2458999999764
No 425
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=97.72 E-value=0.00024 Score=77.45 Aligned_cols=153 Identities=16% Similarity=0.130 Sum_probs=80.9
Q ss_pred CeeeeecCceEEEEEEcCCCEEEEEEEEecCCCcchHHHHHHHHHHHhcCC--CcceeEEeeeecccc-cCCccceeEee
Q 039533 632 NLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHGASRSFIAECKALKSIRH--RNLVKVLTACLGADY-RGNDFKASVYE 708 (949)
Q Consensus 632 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h--~niv~~~~~~~~~~~-~~~~~~~lv~e 708 (949)
+.++.|..+.||++... +..+++|+.... ..+...|+.+++.+.. -.+++++.......+ ...+..++||+
T Consensus 38 ~~l~gG~~n~~~~v~~~--~~~~vlk~~~~~----~~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~~ 111 (346)
T 2q83_A 38 DVIQGNQMALVWKVHTD--SGAVCLKRIHRP----EKKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVYD 111 (346)
T ss_dssp EECC----CEEEEEEET--TEEEEEEEECSC----HHHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEEE
T ss_pred eeccccccCcEEEEEeC--CCCEEEEecCCC----HHHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEEE
Confidence 34666778999999875 345899998642 2344456666665531 134444432100000 11235689999
Q ss_pred eccCCChhh--------------hcCCCCC----CCccccCCCCCCHHH-------------------------------
Q 039533 709 FMHYGSLEE--------------WLHPFTG----EDEIDEAPRNLNLLQ------------------------------- 739 (949)
Q Consensus 709 ~~~~gsL~~--------------~l~~~~~----~~~~~~~~~~l~~~~------------------------------- 739 (949)
|++|.++.. .+|.... ..........-.|..
T Consensus 112 ~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 191 (346)
T 2q83_A 112 WIEGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYLQE 191 (346)
T ss_dssp CCCCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHHHH
T ss_pred eecCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHHH
Confidence 999865430 1110000 000000001112211
Q ss_pred HHHHHHHHHHHHHHHhh----------CCCCCeEecCCCCCCeeecCCCceEEeeccccee
Q 039533 740 RLNIAIDIAYALNYLHH----------DCQPVTAHCDLKPSNVLLDDYMTARVGDFGLARI 790 (949)
Q Consensus 740 ~~~i~~qi~~gL~~LH~----------~~~~~ivHrDlkp~NIll~~~~~~kl~DfG~a~~ 790 (949)
...+..++..++++|++ .....++|||+++.||+++.++.+.|+||+.+..
T Consensus 192 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~~ 252 (346)
T 2q83_A 192 IDGFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVSF 252 (346)
T ss_dssp HHHHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCEE
T ss_pred HHHHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhccc
Confidence 11122234456667763 0246899999999999998888999999998753
No 426
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.66 E-value=6.2e-06 Score=79.19 Aligned_cols=34 Identities=12% Similarity=-0.007 Sum_probs=13.8
Q ss_pred CCcEEECCCCC-CCCCCCCCcCCCCCccEEecccc
Q 039533 162 KTEILNLGSNH-LTGSIPSSLGNLSSIHTISLAYN 195 (949)
Q Consensus 162 ~L~~L~Ls~N~-l~~~~p~~~~~l~~L~~L~L~~N 195 (949)
+|++|+|++|. ||..--..+.++++|++|+|+++
T Consensus 115 ~L~~L~Ls~C~~ITD~Gl~~L~~~~~L~~L~L~~c 149 (176)
T 3e4g_A 115 SMLEMEIISCGNVTDKGIIALHHFRNLKYLFLSDL 149 (176)
T ss_dssp HCCEEEEESCTTCCHHHHHHGGGCTTCCEEEEESC
T ss_pred CCCEEEcCCCCcCCHHHHHHHhcCCCCCEEECCCC
Confidence 34555555542 44221122334444444444443
No 427
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=97.62 E-value=0.00021 Score=75.81 Aligned_cols=78 Identities=14% Similarity=0.059 Sum_probs=56.8
Q ss_pred CCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCCcchHHHHHHHHHHHhcCC---CcceeEEeeeecccccCCccce
Q 039533 628 FSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHGASRSFIAECKALKSIRH---RNLVKVLTACLGADYRGNDFKA 704 (949)
Q Consensus 628 y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h---~niv~~~~~~~~~~~~~~~~~~ 704 (949)
....+.+|.|..+.||+.+.. +|+.|++|+...........+..|++.|+.+.- --+++++++. ..+
T Consensus 17 v~~v~~~g~G~~~~vyrv~l~-DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~---------~~~ 86 (288)
T 3f7w_A 17 VAAVAERGHSHRWHLYRVELA-DGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD---------DRT 86 (288)
T ss_dssp EEEEEEEEEETTEEEEEEEET-TSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE---------TTE
T ss_pred eEEEEecCCCCCeEEEEEEEC-CCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEecc---------Cce
Confidence 344577999999999999987 678999998764444444578899999998842 2355565541 347
Q ss_pred eEeeeccCCCh
Q 039533 705 SVYEFMHYGSL 715 (949)
Q Consensus 705 lv~e~~~~gsL 715 (949)
+||||++++..
T Consensus 87 lv~e~l~~~~~ 97 (288)
T 3f7w_A 87 LAMEWVDERPP 97 (288)
T ss_dssp EEEECCCCCCC
T ss_pred EEEEeecccCC
Confidence 89999987643
No 428
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=97.47 E-value=0.0006 Score=72.76 Aligned_cols=145 Identities=17% Similarity=0.084 Sum_probs=90.2
Q ss_pred CCeeeeecCceEEEEEEcCCCEEEEEEEEecCCCcchHHHHHHHHHHHhcC---CCcceeEEeeeecccccCCccceeEe
Q 039533 631 ANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHGASRSFIAECKALKSIR---HRNLVKVLTACLGADYRGNDFKASVY 707 (949)
Q Consensus 631 ~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~~~~~~~~~~~~~~~~~~lv~ 707 (949)
.+.++.|....+|+... ++..+++|+.... ....+..|++.++.+. ...++++++++... ...++||
T Consensus 41 ~~~l~gG~~n~~y~v~~--~~~~~vlK~~~~~---~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~-----g~~~lvm 110 (312)
T 3jr1_A 41 KEKLYSGEMNEIWLIND--EVQTVFVKINERS---YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQ-----GHSFLLL 110 (312)
T ss_dssp EEEECCSSSSEEEEEES--SSCEEEEEEEEGG---GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECS-----SEEEEEE
T ss_pred eEEeCCccceeeeEEEE--CCCeEEEEeCCcc---cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecC-----CceEEEE
Confidence 35789999999999975 3567889987643 3467889999998883 35688888876433 3689999
Q ss_pred eeccCCChhh-----------hcCCCCCCCcccc------------CCCCCCHHHHH---HHH----------------H
Q 039533 708 EFMHYGSLEE-----------WLHPFTGEDEIDE------------APRNLNLLQRL---NIA----------------I 745 (949)
Q Consensus 708 e~~~~gsL~~-----------~l~~~~~~~~~~~------------~~~~l~~~~~~---~i~----------------~ 745 (949)
||+++..+.. .++.......... ....-+|.+.. ++. .
T Consensus 111 e~l~G~~~~~~~~~~lG~~LA~LH~~~~~~~fG~~~~~~~G~~~q~n~w~~~W~~f~~~~Rl~~~l~~a~~~g~~~~~~~ 190 (312)
T 3jr1_A 111 EALNKSKNKQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGNID 190 (312)
T ss_dssp ECCCCCCCCTTHHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHHHHHHHTCCCSCHH
T ss_pred EeccCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCCCCCcCCHHHHHHHHHHHHHHHHHHHcCCChHHHH
Confidence 9999876521 1221111000000 00112454322 111 1
Q ss_pred HHHHH-HHHHhh-CCCCCeEecCCCCCCeeecCCCceEEeecc
Q 039533 746 DIAYA-LNYLHH-DCQPVTAHCDLKPSNVLLDDYMTARVGDFG 786 (949)
Q Consensus 746 qi~~g-L~~LH~-~~~~~ivHrDlkp~NIll~~~~~~kl~DfG 786 (949)
+++.. ...|.. ...+.++|+|+.+.|++++.++ +.|.|++
T Consensus 191 ~l~~~l~~~L~~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~~ 232 (312)
T 3jr1_A 191 LIVQIVADTLSKHNPKPSILHGNLWIENCIQVDDK-IFVCNPA 232 (312)
T ss_dssp HHHHHHHHHHTTCCCCCEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred HHHHHHHHHhccCCCCceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence 11111 223421 2267899999999999999887 8899974
No 429
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.46 E-value=3.4e-05 Score=74.07 Aligned_cols=84 Identities=14% Similarity=0.084 Sum_probs=54.1
Q ss_pred CcccEEEeecceecccCCCcccccCCCCEEecCCcc-cccccCcccccc----cccceeeccccc-ccccCCCCCCCCCC
Q 039533 318 VNLQRLDMWNNQLSGTIPPAIGELQNLKILGLNRNK-LSGNIPPSIGNL----KMLLNLFLNDNF-LEVSIPSSLGQCES 391 (949)
Q Consensus 318 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~l----~~L~~L~L~~N~-l~~~~p~~~~~l~~ 391 (949)
.+|++|||+++.|+..--..+.++++|+.|+|++|. |+..--..+..+ ++|+.|+|++|. ++..--..+..+++
T Consensus 61 ~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~ 140 (176)
T 3e4g_A 61 YKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRN 140 (176)
T ss_dssp CCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTT
T ss_pred ceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCC
Confidence 357777777777765544556677777777777774 554333344443 367777777764 65443344566788
Q ss_pred CcEEEeeCcc
Q 039533 392 LIEINLSNNN 401 (949)
Q Consensus 392 L~~L~l~~N~ 401 (949)
|+.|+|+++.
T Consensus 141 L~~L~L~~c~ 150 (176)
T 3e4g_A 141 LKYLFLSDLP 150 (176)
T ss_dssp CCEEEEESCT
T ss_pred CCEEECCCCC
Confidence 8888888774
No 430
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=97.43 E-value=9.9e-05 Score=83.10 Aligned_cols=80 Identities=11% Similarity=-0.025 Sum_probs=50.9
Q ss_pred CCCeEecCCCCCCeeecCCCceEEeecccceecCCCCCccccccccCccCccCccccCCC---ccCCccchHHHHHHHHH
Q 039533 759 QPVTAHCDLKPSNVLLDDYMTARVGDFGLARILSPDHTQTSSFSVKGSLGYIAPEYGVGC---EVSTNGDVYSYGILLLE 835 (949)
Q Consensus 759 ~~~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~sDiwSlGvvl~e 835 (949)
.+.++|||++|.||+++.++ ++++||+.+....+.......... -...|.+|+..... ......++.+....+|+
T Consensus 231 ~~~liHGDl~~~Nil~~~~~-~~lID~e~a~~G~p~~Dla~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (420)
T 2pyw_A 231 AQALIHGDLHTGSVMVTQDS-TQVIDPEFSFYGPMGFDIGAYLGN-LILAFFAQDGHATQENDRKEYKQWILRTIEQTWN 308 (420)
T ss_dssp CCEEECSCCSGGGEEECSSC-EEECCCTTCEEECHHHHHHHHHHH-HHHHHHHGGGGCCSSCCSHHHHHHHHHHHHHHHH
T ss_pred CCeEEecCCCCCcEEEeCCC-CEEEeCcccccCchHHHHHHHHHH-HHHHHHhcccccccccchHHHHHHHHHHHHHHHH
Confidence 55899999999999999876 999999998764332111110000 12346666654321 12234566688888888
Q ss_pred HHhCC
Q 039533 836 LVIGK 840 (949)
Q Consensus 836 lltg~ 840 (949)
.++++
T Consensus 309 ~y~~~ 313 (420)
T 2pyw_A 309 LFNKR 313 (420)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 88764
No 431
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=97.23 E-value=0.0011 Score=70.59 Aligned_cols=74 Identities=9% Similarity=0.055 Sum_probs=45.8
Q ss_pred CCCCCeeeeecCceEEEEEEcCCCEEEEEEEEecCCCcchHHHHHHHHHHHhcCCCcc-eeEEeeeecccccCCccceeE
Q 039533 628 FSSANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHGASRSFIAECKALKSIRHRNL-VKVLTACLGADYRGNDFKASV 706 (949)
Q Consensus 628 y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ni-v~~~~~~~~~~~~~~~~~~lv 706 (949)
+.-.+.|+.|....+|++ ..+++|+....... .....+|+.+++.+....+ .++++++. +..++|
T Consensus 20 ~~~i~~l~gG~tN~~~~~------~~~vlR~~~~~~~~-~~~r~~E~~~l~~l~~~g~~P~~~~~~~-------~~~~~v 85 (301)
T 3dxq_A 20 YTGPLERLGGLTNLVFRA------GDLCLRIPGKGTEE-YINRANEAVAAREAAKAGVSPEVLHVDP-------ATGVMV 85 (301)
T ss_dssp CCSCEEEESCSSEEEEEE------TTEEEEEECC-----CCCHHHHHHHHHHHHHTTSSCCEEEECT-------TTCCEE
T ss_pred ccceeEcCCcccccccee------eeEEEECCCCCccc-eeCHHHHHHHHHHHHHcCCCCceEEEEC-------CCCEEE
Confidence 333688999999999999 34889988643221 1223568888877742222 46665421 134789
Q ss_pred eeec-cCCCh
Q 039533 707 YEFM-HYGSL 715 (949)
Q Consensus 707 ~e~~-~~gsL 715 (949)
+||+ ++.++
T Consensus 86 ~e~i~~g~~l 95 (301)
T 3dxq_A 86 TRYIAGAQTM 95 (301)
T ss_dssp EECCTTCEEC
T ss_pred EeecCCCccC
Confidence 9999 66544
No 432
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=97.18 E-value=0.002 Score=72.61 Aligned_cols=75 Identities=13% Similarity=0.089 Sum_probs=49.0
Q ss_pred CCeeeeecCceEEEEEEcCCCEEEEEEEEecCCCcchHHHHHHHHHHHhcCCCcc-eeEEeeeecccccCCccceeEeee
Q 039533 631 ANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHGASRSFIAECKALKSIRHRNL-VKVLTACLGADYRGNDFKASVYEF 709 (949)
Q Consensus 631 ~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ni-v~~~~~~~~~~~~~~~~~~lv~e~ 709 (949)
.+.|+.|-...+|++....++..+++|+......... ...+|..+++.+...++ +++++++. -..||||
T Consensus 113 i~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~~~i-dR~~E~~vl~~L~~~gl~P~ll~~~~---------~G~v~e~ 182 (458)
T 2qg7_A 113 FQIINGGITNILIKVKDMSKQAKYLIRLYGPKTDEII-NREREKKISCILYNKNIAKKIYVFFT---------NGRIEEF 182 (458)
T ss_dssp EEEECC--CEEEEEEEETTTTEEEEEEEECC-CCSCS-CHHHHHHHHHHHTTSSSBCCEEEEET---------TEEEEEC
T ss_pred EEEcCCCeEeEEEEEEECCCCceEEEEECCCChhhhc-CHHHHHHHHHHHHhcCCCCCEEEEeC---------CeEEEEe
Confidence 3578888889999999864358899999854322111 22589999998864444 56666541 1359999
Q ss_pred ccCCCh
Q 039533 710 MHYGSL 715 (949)
Q Consensus 710 ~~~gsL 715 (949)
++|.++
T Consensus 183 I~G~~l 188 (458)
T 2qg7_A 183 MDGYAL 188 (458)
T ss_dssp CCSEEC
T ss_pred eCCccC
Confidence 987555
No 433
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=97.07 E-value=3e-05 Score=75.93 Aligned_cols=69 Identities=12% Similarity=0.179 Sum_probs=40.0
Q ss_pred cCCCCCCCCCceeeccCc-eecc----ccCCcccCcccCcEEeeccccccCcCCCCC----CCCccceeecCCCcccc
Q 039533 82 SHFIGNLSFLKQLYLQVN-SFTH----EIPSEIGGLRRLKVLALNNNSICGEIPTNI----SRCSTLIPIHPQNNQLV 150 (949)
Q Consensus 82 ~~~l~~l~~L~~L~L~~n-~l~~----~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~----~~l~~L~~L~l~~n~l~ 150 (949)
...+.+-+.|++|+|++| ++.. .+-..+..-+.|+.|+|++|+|...--..| ..-+.|++|+|++|.|.
T Consensus 34 ~~ll~~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig 111 (197)
T 1pgv_A 34 NRLREDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLT 111 (197)
T ss_dssp HHHHTTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCC
T ss_pred HHHHhcCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCC
Confidence 334555677888888875 6653 244456666778888888888764322222 23344544555555443
No 434
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=97.05 E-value=0.002 Score=69.31 Aligned_cols=169 Identities=14% Similarity=0.072 Sum_probs=89.0
Q ss_pred cCHHHHHHHhcCCCCC-----CeeeeecCceEEEEEEcCCCEEEEEEEEecCCCcchHHHHHHHHHHHhcCCCc--ceeE
Q 039533 616 LSYQDLYNATSGFSSA-----NLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHGASRSFIAECKALKSIRHRN--LVKV 688 (949)
Q Consensus 616 ~~~~~l~~~~~~y~~~-----~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n--iv~~ 688 (949)
++.+++......|.+. +.|+.|....+|+.... ++ .+++|+.... .....+..|+.+++.+.... +.++
T Consensus 7 ~~~~~l~~~l~~~~~~~~~~~~~i~~G~~n~~~~v~~~-~g-~~vlk~~~~~--~~~~~l~~e~~~l~~L~~~g~~vP~~ 82 (322)
T 2ppq_A 7 ITEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTT-KD-PLILTLYEKR--VEKNDLPFFLGLMQHLAAKGLSCPLP 82 (322)
T ss_dssp CCHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEES-SC-CEEEEEECC-----CCHHHHHHHHHHHHHHTTCCCCCB
T ss_pred CCHHHHHHHHHhCCCCcceEeeccCCCcccceEEEEeC-Cc-cEEEEEeCCC--CCHHHHHHHHHHHHHHHHCCCCCCcc
Confidence 4556676666667663 34666888899999875 33 6889988642 12345667888877774222 3444
Q ss_pred Eeeeecccc-cCCccceeEeeeccCCChhhh--------------cC----CCCCCCccccCCCCCCHHHHHH-------
Q 039533 689 LTACLGADY-RGNDFKASVYEFMHYGSLEEW--------------LH----PFTGEDEIDEAPRNLNLLQRLN------- 742 (949)
Q Consensus 689 ~~~~~~~~~-~~~~~~~lv~e~~~~gsL~~~--------------l~----~~~~~~~~~~~~~~l~~~~~~~------- 742 (949)
+....+..+ ...+..+++|+|++|..+... ++ ....... .......|.....
T Consensus 83 ~~~~~g~~~~~~~g~~~~l~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~--~~~~~~~w~~~~~~~~~~~~ 160 (322)
T 2ppq_A 83 LPRKDGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRP--NALSVDGWKVLWDKSEERAD 160 (322)
T ss_dssp CCBTTCCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCB--CTTSHHHHHHHHHHHGGGGG
T ss_pred cCCCCCCEEEEECCEEEEEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCccc--CccChHHHHHHHHHHHHHHH
Confidence 322100000 011246889999998654210 11 1000000 0000011211000
Q ss_pred -----HHHHHHHHHHHHhhC----CCCCeEecCCCCCCeeecCCCceEEeeccccee
Q 039533 743 -----IAIDIAYALNYLHHD----CQPVTAHCDLKPSNVLLDDYMTARVGDFGLARI 790 (949)
Q Consensus 743 -----i~~qi~~gL~~LH~~----~~~~ivHrDlkp~NIll~~~~~~kl~DfG~a~~ 790 (949)
+...+.+.+++++.. ...+++|+|+.+.||+++++..+.|+||+.+..
T Consensus 161 ~~~~~l~~~l~~~~~~l~~~~~~~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~~ 217 (322)
T 2ppq_A 161 EVEKGLREEIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFACN 217 (322)
T ss_dssp GTSTTHHHHHHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCEE
T ss_pred hhhhhhHHHHHHHHHHHHhhCcccCCcccCCCCCCccCEEEeCCceEEEecchhccC
Confidence 011234445555431 245799999999999999876668999997753
No 435
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=97.01 E-value=0.0019 Score=72.47 Aligned_cols=74 Identities=12% Similarity=0.155 Sum_probs=50.0
Q ss_pred CCeeeeecCceEEEEEEcC-------CCEEEEEEEEecCCCcchHHHHHHHHHHHhcCCCc-ceeEEeeeecccccCCcc
Q 039533 631 ANLVGVGSFGSVYKGIIDE-------GRTTIAVKVFNLQHHGASRSFIAECKALKSIRHRN-LVKVLTACLGADYRGNDF 702 (949)
Q Consensus 631 ~~~lg~G~~g~Vy~~~~~~-------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n-iv~~~~~~~~~~~~~~~~ 702 (949)
.+.|+.|....||++.... +++.+++|+.... .....+..|..+++.+...+ .+++++.+.
T Consensus 78 v~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~--~~~~~li~E~~~l~~L~~~g~~P~l~~~~~--------- 146 (429)
T 1nw1_A 78 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNP--ETESHLVAESVIFTLLSERHLGPKLYGIFS--------- 146 (429)
T ss_dssp EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSC--CCHHHHHHHHHHHHHHHHTTSSSCEEEEET---------
T ss_pred EEEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCC--CcHHHHHHHHHHHHHHHhCCCCCcEEEEeC---------
Confidence 3568888889999998753 2578999998432 11245668999998884333 456666532
Q ss_pred ceeEeeeccCCCh
Q 039533 703 KASVYEFMHYGSL 715 (949)
Q Consensus 703 ~~lv~e~~~~gsL 715 (949)
-.+||||++|.++
T Consensus 147 ~g~v~e~l~G~~l 159 (429)
T 1nw1_A 147 GGRLEEYIPSRPL 159 (429)
T ss_dssp TEEEECCCCEEEC
T ss_pred CCEEEEEeCCccc
Confidence 1379999987554
No 436
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=96.93 E-value=0.0021 Score=70.53 Aligned_cols=145 Identities=12% Similarity=0.122 Sum_probs=83.9
Q ss_pred CCeeeeecCceEEEEEEcC-------CCEEEEEEEEecCCCcchHHHHHHHHHHHhcC-CCcceeEEeeeecccccCCcc
Q 039533 631 ANLVGVGSFGSVYKGIIDE-------GRTTIAVKVFNLQHHGASRSFIAECKALKSIR-HRNLVKVLTACLGADYRGNDF 702 (949)
Q Consensus 631 ~~~lg~G~~g~Vy~~~~~~-------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~~~ 702 (949)
.+.+..|-...+|++.... +++.+++|+..... .......+|.++++.+. +.-..++++++. +
T Consensus 55 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~~-~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~--~------ 125 (379)
T 3feg_A 55 VYPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAIL-QGVDSLVLESVMFAILAERSLGPQLYGVFP--E------ 125 (379)
T ss_dssp CEEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC----CCHHHHHHHHHHHHHHHHTTSSCCEEEEET--T------
T ss_pred EEEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCcc-chHHHHHHHHHHHHHHHhcCCCCeEEEEcC--C------
Confidence 3577778889999998742 34789999864322 23456678999998884 333466666542 1
Q ss_pred ceeEeeeccCCChhhh-c----------------CCCCCCCccccCCCCCC--HHHHHHHHHHHHH--------------
Q 039533 703 KASVYEFMHYGSLEEW-L----------------HPFTGEDEIDEAPRNLN--LLQRLNIAIDIAY-------------- 749 (949)
Q Consensus 703 ~~lv~e~~~~gsL~~~-l----------------~~~~~~~~~~~~~~~l~--~~~~~~i~~qi~~-------------- 749 (949)
.+||||++|.++..- + |.... ....... +.+..++..++..
T Consensus 126 -g~v~e~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~-----~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~ 199 (379)
T 3feg_A 126 -GRLEQYIPSRPLKTQELREPVLSAAIATKMAQFHGMEM-----PFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEM 199 (379)
T ss_dssp -EEEEECCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCC-----SSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHH
T ss_pred -ccEEEEecCccCChhHhCCHHHHHHHHHHHHHHhCCCC-----CCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhh
Confidence 389999998665421 1 10000 0011122 3444555544322
Q ss_pred -----HHHHHh----h-CCCCCeEecCCCCCCeeecCC----CceEEeeccccee
Q 039533 750 -----ALNYLH----H-DCQPVTAHCDLKPSNVLLDDY----MTARVGDFGLARI 790 (949)
Q Consensus 750 -----gL~~LH----~-~~~~~ivHrDlkp~NIll~~~----~~~kl~DfG~a~~ 790 (949)
.++.|. . .....++|+|+.+.||+++.+ +.+.++||..|..
T Consensus 200 ~~l~~~~~~L~~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~~ 254 (379)
T 3feg_A 200 YSLKDEMGNLRKLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSSY 254 (379)
T ss_dssp TTHHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCEE
T ss_pred HHHHHHHHHHHHHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCCc
Confidence 122222 1 124579999999999999876 7899999998764
No 437
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=96.67 E-value=0.016 Score=62.35 Aligned_cols=169 Identities=14% Similarity=0.110 Sum_probs=89.7
Q ss_pred ccCHHHHHHHhcCCCC-----CCeeeeecCceEEEEEEcCCCEEEEEEEEecCCCcchHHHHHHHHHHHhcCCC--ccee
Q 039533 615 YLSYQDLYNATSGFSS-----ANLVGVGSFGSVYKGIIDEGRTTIAVKVFNLQHHGASRSFIAECKALKSIRHR--NLVK 687 (949)
Q Consensus 615 ~~~~~~l~~~~~~y~~-----~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~--niv~ 687 (949)
..+.+++......|.+ ...++ |....||++... +|+.+++|+..... .....+..|..+++.+... .+++
T Consensus 10 ~l~~~~i~~~l~~~g~~~~~~~~~l~-g~~n~~y~v~~~-~g~~~vlK~~~~~~-~~~~~~~~E~~~~~~L~~~g~~vp~ 86 (328)
T 1zyl_A 10 TLHPDTIMDALFEHGIRVDSGLTPLN-SYENRVYQFQDE-DRRRFVVKFYRPER-WTADQILEEHQFALQLVNDEVPVAA 86 (328)
T ss_dssp CCCHHHHHHHHHHTTCCCCSCCEEEC-CSSSEEEEECCT-TCCCEEEEEECTTT-SCHHHHHHHHHHHHHHHHTTCSBCC
T ss_pred CCCHHHHHHHHHHcCCCCCceEEeec-CcccceEEEEcC-CCCEEEEEEcCCCC-CCHHHHHHHHHHHHHHHHcCCeecc
Confidence 3445555555444432 24566 888899988764 45679999986332 2345677788888887422 2444
Q ss_pred EEeeeeccc-ccCCccceeEeeeccCCChhh-----h---------cCCCCCCCccccCCCCCCHHH-------------
Q 039533 688 VLTACLGAD-YRGNDFKASVYEFMHYGSLEE-----W---------LHPFTGEDEIDEAPRNLNLLQ------------- 739 (949)
Q Consensus 688 ~~~~~~~~~-~~~~~~~~lv~e~~~~gsL~~-----~---------l~~~~~~~~~~~~~~~l~~~~------------- 739 (949)
++.. .+.. ....+..++||+|++|..+.. + +|........ ......++..
T Consensus 87 ~~~~-~g~~~~~~~g~~~~l~~~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~ 164 (328)
T 1zyl_A 87 PVAF-NGQTLLNHQGFYFAVFPSVGGRQFEADNIDQMEAVGRYLGRMHQTGRKQLF-IHRPTIGLNEYLIEPRKLFEDAT 164 (328)
T ss_dssp CCCB-TTBSCEEETTEEEEEEECCCCEECCSSCHHHHHHHHHHHHHHHHHHTSSCC-SSSCBCSHHHHTHHHHHHHHTCS
T ss_pred eeec-CCcEEEEECCEEEEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHhhccCCC-ccCCCCCHHHHHhhHHHHHhhcC
Confidence 4433 1110 011234578999998754321 0 1100000000 0001112111
Q ss_pred ---------HHHHHHHHHHHHHHHhh-CCCCCeEecCCCCCCeeecCCCceEEeeccccee
Q 039533 740 ---------RLNIAIDIAYALNYLHH-DCQPVTAHCDLKPSNVLLDDYMTARVGDFGLARI 790 (949)
Q Consensus 740 ---------~~~i~~qi~~gL~~LH~-~~~~~ivHrDlkp~NIll~~~~~~kl~DfG~a~~ 790 (949)
....+.+++..++..-. .....++|||+++.||+++ + .+.++||+.+..
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~ 223 (328)
T 1zyl_A 165 LIPSGLKAAFLKATDELIAAVTAHWREDFTVLRLHGDCHAGNILWR-D-GPMFVDLDDARN 223 (328)
T ss_dssp SSCTTTHHHHHHHHHHHHHHHHHHCCSCSCCEECCSSCSGGGEEES-S-SEEECCCTTCCE
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHHhhhcCCeeeeeCCCCcccEeEc-C-CCEEEECCCCCc
Confidence 11122222222222211 1245789999999999999 4 899999998764
No 438
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=96.65 E-value=0.0092 Score=64.49 Aligned_cols=33 Identities=27% Similarity=0.206 Sum_probs=28.5
Q ss_pred CCCeEecCCCCCCeeecCC----CceEEeecccceec
Q 039533 759 QPVTAHCDLKPSNVLLDDY----MTARVGDFGLARIL 791 (949)
Q Consensus 759 ~~~ivHrDlkp~NIll~~~----~~~kl~DfG~a~~~ 791 (949)
...++|||+.+.||+++.+ +.+.|+||+.+..-
T Consensus 182 ~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~G 218 (333)
T 3csv_A 182 DMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKLG 218 (333)
T ss_dssp CCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEEE
T ss_pred CCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCcC
Confidence 4589999999999999874 68999999988754
No 439
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=96.61 E-value=0.00014 Score=71.23 Aligned_cols=115 Identities=16% Similarity=0.123 Sum_probs=72.4
Q ss_pred CcccCcccCcEEeeccc-cccCc----CCCCCCCCccceeecCCCccccccc----cccccCCCCCcEEECCCCCCCCC-
Q 039533 107 SEIGGLRRLKVLALNNN-SICGE----IPTNISRCSTLIPIHPQNNQLVGKI----LSRFSSLSKTEILNLGSNHLTGS- 176 (949)
Q Consensus 107 ~~~~~l~~L~~L~Ls~N-~l~~~----~p~~~~~l~~L~~L~l~~n~l~~~~----~~~~~~L~~L~~L~Ls~N~l~~~- 176 (949)
..+.+-+.|++|+|++| +|... +-+.+..-+.|+.|+|++|+|.... ...+..-+.|++|+|++|.|...
T Consensus 35 ~ll~~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~G 114 (197)
T 1pgv_A 35 RLREDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPEL 114 (197)
T ss_dssp HHHTTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHH
T ss_pred HHHhcCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHH
Confidence 34556678999999986 77532 3344556677888888888886443 33444567788888888888732
Q ss_pred ---CCCCcCCCCCccEEeccccc---cCC----CCCCcccCCCccccccccCccc
Q 039533 177 ---IPSSLGNLSSIHTISLAYNN---LDG----TIPNSFGWFENLVFLSLAANNL 221 (949)
Q Consensus 177 ---~p~~~~~l~~L~~L~L~~N~---l~~----~~p~~~~~l~~L~~L~Ls~N~l 221 (949)
+-..+..-+.|++|+|++|. +.. .+...+..-+.|+.|+++.|.+
T Consensus 115 a~ala~aL~~N~tL~~L~L~n~~~~~ig~~g~~~ia~aL~~N~tL~~L~l~~~~~ 169 (197)
T 1pgv_A 115 LARLLRSTLVTQSIVEFKADNQRQSVLGNQVEMDMMMAIEENESLLRVGISFASM 169 (197)
T ss_dssp HHHHHHHTTTTCCCSEEECCCCSSCCCCHHHHHHHHHHHHHCSSCCEEECCCCCH
T ss_pred HHHHHHHHhhCCceeEEECCCCcCcCcCHHHHHHHHHHHHhCCCcCeEeccCCCc
Confidence 22345555668888887653 221 1223344456667777766543
No 440
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=96.50 E-value=0.0053 Score=67.46 Aligned_cols=74 Identities=14% Similarity=0.180 Sum_probs=44.3
Q ss_pred CeeeeecCceEEEEEEcC--------CCEEEEEEEEecCCCcchHHHHHHHHHHHhcCCCc-ceeEEeeeecccccCCcc
Q 039533 632 NLVGVGSFGSVYKGIIDE--------GRTTIAVKVFNLQHHGASRSFIAECKALKSIRHRN-LVKVLTACLGADYRGNDF 702 (949)
Q Consensus 632 ~~lg~G~~g~Vy~~~~~~--------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n-iv~~~~~~~~~~~~~~~~ 702 (949)
+.++.|....+|++.... .++.+++|+....... ......|.++++.+.... ++++++.. .
T Consensus 39 ~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~~-~~~~~~E~~~l~~L~~~g~~P~~~~~~---------~ 108 (369)
T 3c5i_A 39 KQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVDE-LYNTISEFEVYKTMSKYKIAPQLLNTF---------N 108 (369)
T ss_dssp EEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGGG-TSCHHHHHHHHHHHHHTTSSCCEEEEE---------T
T ss_pred EEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCccc-eecHHHHHHHHHHHHhcCCCCceEEec---------C
Confidence 567788888999998753 1267899987543211 112467888888874333 45666542 1
Q ss_pred ceeEeeeccCCCh
Q 039533 703 KASVYEFMHYGSL 715 (949)
Q Consensus 703 ~~lv~e~~~~gsL 715 (949)
-++||||++|.++
T Consensus 109 ~~~v~e~i~G~~l 121 (369)
T 3c5i_A 109 GGRIEEWLYGDPL 121 (369)
T ss_dssp TEEEEECCCSEEC
T ss_pred CcEEEEEecCCcC
Confidence 3689999987544
No 441
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=96.34 E-value=0.012 Score=63.75 Aligned_cols=33 Identities=21% Similarity=0.303 Sum_probs=28.9
Q ss_pred CCCeEecCCCCCCeeecCCCceEEeecccceec
Q 039533 759 QPVTAHCDLKPSNVLLDDYMTARVGDFGLARIL 791 (949)
Q Consensus 759 ~~~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~ 791 (949)
...++|+|+.+.||++++++.+.|+||+.+...
T Consensus 205 ~~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~~ 237 (339)
T 3i1a_A 205 KYVLCHSDIHAGNVLVGNEESIYIIDWDEPMLA 237 (339)
T ss_dssp GCEEECSCCCGGGEEECGGGCEEECCCSSCEEE
T ss_pred CceeEeCCCCcCCEEEeCCCeEEEEECCCCeeC
Confidence 457999999999999998888999999887653
No 442
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.34 E-value=0.0042 Score=56.63 Aligned_cols=34 Identities=32% Similarity=0.337 Sum_probs=15.5
Q ss_pred cEEECCCCCCCCCCCCCcCCCCCccEEecccccc
Q 039533 164 EILNLGSNHLTGSIPSSLGNLSSIHTISLAYNNL 197 (949)
Q Consensus 164 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l 197 (949)
++|+|++|+|+...+..|..+++|++|+|++|.+
T Consensus 34 ~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~ 67 (130)
T 3rfe_A 34 TELVLTGNNLTALPPGLLDALPALRTAHLGANPW 67 (130)
T ss_dssp SEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCC
T ss_pred CEEECCCCcCCccChhhhhhccccCEEEecCCCe
Confidence 4444444444433333444444445555555443
No 443
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.28 E-value=0.005 Score=56.13 Aligned_cols=56 Identities=20% Similarity=0.251 Sum_probs=29.1
Q ss_pred EEEccCcccc-CCCCCCCCCCCcccEEEeecceecccCCCcccccCCCCEEecCCcccc
Q 039533 298 TLFLNNNKIY-GSIPAGIGNFVNLQRLDMWNNQLSGTIPPAIGELQNLKILGLNRNKLS 355 (949)
Q Consensus 298 ~L~L~~N~l~-~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 355 (949)
.++.+++.++ ..+|..+. ++|++|+|++|+|+...+..|..+++|+.|+|++|.+.
T Consensus 12 ~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp EEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred EEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 4455555553 23333221 24556666666665444455566666666666666553
No 444
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=95.84 E-value=0.03 Score=61.54 Aligned_cols=145 Identities=12% Similarity=0.141 Sum_probs=83.2
Q ss_pred CeeeeecCceEEEEEEcC-------CCEEEEEEEEecCCCc------------------chHHHHHHHHHHHhcC-CCcc
Q 039533 632 NLVGVGSFGSVYKGIIDE-------GRTTIAVKVFNLQHHG------------------ASRSFIAECKALKSIR-HRNL 685 (949)
Q Consensus 632 ~~lg~G~~g~Vy~~~~~~-------~~~~vavK~~~~~~~~------------------~~~~~~~E~~~l~~l~-h~ni 685 (949)
+.|..|-...+|++.... ..+.|++++....... ..+....|..+++.+. +.-.
T Consensus 58 ~~l~gGlTN~~~~v~~~~~~~~~~~~~~~~llRi~G~~te~~~~~~~~~~~idR~~~~~~~~~~~~E~~~l~~L~~~Gi~ 137 (401)
T 3f2s_A 58 SVIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYGAILQMRSCNKEGSEQAQKENEFQGAEAMVLESVMFAILAERSLG 137 (401)
T ss_dssp EEEECSSEEEEEEEECCTTCCCSSSCCSEEEEEEEEC-----------------------CHHHHHHHHHHHHHHHTTSS
T ss_pred EEcCCCccCceEEEEeCCCcccccCCCccEEEEeCCCCcccccccccccchhhhhhhhccchhhHHHHHHHHHHHhcCCC
Confidence 466667788999988752 1367999998543211 0112335888888884 4446
Q ss_pred eeEEeeeecccccCCccceeEeeeccCCChhhh-c----------------CCCCCCCccccCCCCCC--HHHHHHHHHH
Q 039533 686 VKVLTACLGADYRGNDFKASVYEFMHYGSLEEW-L----------------HPFTGEDEIDEAPRNLN--LLQRLNIAID 746 (949)
Q Consensus 686 v~~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~-l----------------~~~~~~~~~~~~~~~l~--~~~~~~i~~q 746 (949)
.++++++. -.+|+||+++-+|..- + |.. .. ....... +....++..+
T Consensus 138 Pkl~~~~~---------~G~i~efI~G~~L~~~dl~~p~~~~~iA~~L~~LH~~--~~---~~~~~~~~l~~~i~~~~~~ 203 (401)
T 3f2s_A 138 PKLYGIFP---------QGRLEQFIPSRRLDTEELSLPDISAEIAEKMATFHGM--KM---PFNKEPKWLFGTMEKYLKE 203 (401)
T ss_dssp CCEEEEET---------TEEEEECCCEEECCGGGGGSHHHHHHHHHHHHHHHTC--CC---SSCCSCCHHHHHHHHHHHH
T ss_pred CeEEEEeC---------CCeEEEecCCccCCHHHHhhHHHHHHHHHHHHHHhCC--CC---CCCCCcchHHHHHHHHHHH
Confidence 67776642 1389999987555321 0 100 00 0011122 2233334333
Q ss_pred HH----------------------HHH----HHHhhC-CCCCeEecCCCCCCeeecCC------CceEEeeccccee
Q 039533 747 IA----------------------YAL----NYLHHD-CQPVTAHCDLKPSNVLLDDY------MTARVGDFGLARI 790 (949)
Q Consensus 747 i~----------------------~gL----~~LH~~-~~~~ivHrDlkp~NIll~~~------~~~kl~DfG~a~~ 790 (949)
+. .-+ ++|... ....++|+|+.+.||+++++ +.+.++||..|..
T Consensus 204 l~~~~~~~~~~~~~~~~~~~~~l~~e~~~l~~~l~~~~~~~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~~ 280 (401)
T 3f2s_A 204 VLRIKFTEESRIKKLHKLLSYNLPLELENLRSLLESTPSPVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp HHHCCCCSHHHHHHHHHHHTTCHHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCEE
T ss_pred HHhccCcchhhhhhhhhhhhHHHHHHHHHHHHHHhhcCCCeeEEeccCCcccEEEcCCcccCcccceEEEeeccCCc
Confidence 21 112 223221 24578999999999999876 7899999998754
No 445
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=95.45 E-value=0.085 Score=51.74 Aligned_cols=104 Identities=15% Similarity=0.047 Sum_probs=67.2
Q ss_pred CCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEeecccceec
Q 039533 712 YGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVGDFGLARIL 791 (949)
Q Consensus 712 ~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~ 791 (949)
..+|.+.|. ..+.++++++++.++.|.+.+|.-+-.+.. . ..+=+.|..|++..+|.+...+ +.+.
T Consensus 32 ~vSL~eIL~---------~~~~PlsEEqaWALc~Qc~~~L~~~~~~~~-~-~~~i~~~~~i~l~~dG~V~f~~-~~s~-- 97 (229)
T 2yle_A 32 ALSLEEILR---------LYNQPINEEQAWAVCYQCCGSLRAAARRRQ-P-RHRVRSAAQIRVWRDGAVTLAP-AADD-- 97 (229)
T ss_dssp EEEHHHHHH---------HHTSCCCHHHHHHHHHHHHHHHHHHHHTTC-C-CCCCCSGGGEEEETTSCEEECC-C-----
T ss_pred cccHHHHHH---------HcCCCcCHHHHHHHHHHHHHHHHhhhhccc-C-CceecCCcceEEecCCceeccc-cccc--
Confidence 347888886 245779999999999999999877621100 1 1223456889999999888764 1110
Q ss_pred CCCCCccccccccCccCccCccccCCCccCCccchHHHHHHHHHHHhCCCC
Q 039533 792 SPDHTQTSSFSVKGSLGYIAPEYGVGCEVSTNGDVYSYGILLLELVIGKKP 842 (949)
Q Consensus 792 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvvl~elltg~~P 842 (949)
.....+.|||... ...+.+.=|||+|+++|.-+--..|
T Consensus 98 ------------~~~~~~~~pe~~~-~~~te~~~IysLG~tLY~ALDygL~ 135 (229)
T 2yle_A 98 ------------AGEPPPVAGKLGY-SQCMETEVIESLGIIIYKALDYGLK 135 (229)
T ss_dssp ---------------------CCSS-SSSCHHHHHHHHHHHHHHHHTTTCC
T ss_pred ------------ccccCCCChhhcc-ccchHHHHHHHHHHHHHHHhhcCCC
Confidence 0233466888764 3456788999999999999975555
No 446
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=95.36 E-value=0.031 Score=62.01 Aligned_cols=74 Identities=9% Similarity=0.086 Sum_probs=48.5
Q ss_pred CeeeeecCceEEEEEEcCC-------CEEEEEEEEecCCCcchHHHHHHHHHHHhcC-CCcceeEEeeeecccccCCccc
Q 039533 632 NLVGVGSFGSVYKGIIDEG-------RTTIAVKVFNLQHHGASRSFIAECKALKSIR-HRNLVKVLTACLGADYRGNDFK 703 (949)
Q Consensus 632 ~~lg~G~~g~Vy~~~~~~~-------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~~~~ 703 (949)
+.+..|-...+|+.....+ ++.+++|+....... .-...+|.++++.+. +.-..++++.+ .-
T Consensus 76 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t~~-~idR~~E~~~l~~L~~~gi~P~l~~~~---------~~ 145 (424)
T 3mes_A 76 KQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHVGK-FYDSKVELDVFRYLSNINIAPNIIADF---------PE 145 (424)
T ss_dssp EEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC-C-CCCHHHHHHHHHHHHHTTSSCCEEEEE---------TT
T ss_pred EEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCcch-hcCHHHHHHHHHHHHhcCCCCCEEEEc---------CC
Confidence 5677788889999987521 577999987543221 123457888888874 33345666432 23
Q ss_pred eeEeeeccCCCh
Q 039533 704 ASVYEFMHYGSL 715 (949)
Q Consensus 704 ~lv~e~~~~gsL 715 (949)
+.||||++|.++
T Consensus 146 ~~I~efI~G~~l 157 (424)
T 3mes_A 146 GRIEEFIDGEPL 157 (424)
T ss_dssp EEEEECCCSEEC
T ss_pred CEEEEEeCCccC
Confidence 789999998664
No 447
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=92.95 E-value=0.29 Score=54.11 Aligned_cols=30 Identities=27% Similarity=0.347 Sum_probs=25.5
Q ss_pred CeEecCCCCCCeee------cCCCceEEeeccccee
Q 039533 761 VTAHCDLKPSNVLL------DDYMTARVGDFGLARI 790 (949)
Q Consensus 761 ~ivHrDlkp~NIll------~~~~~~kl~DfG~a~~ 790 (949)
.++|+|+.+.||++ +++..++++||..|..
T Consensus 245 vfcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~ 280 (401)
T 3g15_A 245 VFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp EEECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred eeEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence 46899999999999 4567899999998864
No 448
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=84.25 E-value=2.1 Score=41.85 Aligned_cols=88 Identities=17% Similarity=0.206 Sum_probs=64.7
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCeeecCCCceEEeecccceecCCCCCccccccccCccCccCc
Q 039533 733 RNLNLLQRLNIAIDIAYALNYLHHDCQPVTAHCDLKPSNVLLDDYMTARVGDFGLARILSPDHTQTSSFSVKGSLGYIAP 812 (949)
Q Consensus 733 ~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aP 812 (949)
...+...+++++.+|+....+++++ +|--+.|+||+++.++.+++.-.|+...+.+..
T Consensus 76 k~~~~~eKlr~l~ni~~l~~~~~~r-----~tf~L~P~NL~f~~~~~p~i~~RGik~~l~P~~----------------- 133 (215)
T 4ann_A 76 KSFTKNEKLRYLLNIKNLEEVNRTR-----YTFVLAPDELFFTRDGLPIAKTRGLQNVVDPLP----------------- 133 (215)
T ss_dssp GGSCHHHHHHHHHHGGGGGGGGGSS-----EECCCSGGGEEECTTSCEEESCCEETTTBSCCC-----------------
T ss_pred HhcCHHHHHHHHHHHHHHHHHhcCc-----eEEEEecceEEEcCCCCEEEEEccCccCCCCCC-----------------
Confidence 4478889999999999998777744 788899999999999999999887643332211
Q ss_pred cccCCCccCCccchHHHHHHHHHHHhCCCCCcccccc
Q 039533 813 EYGVGCEVSTNGDVYSYGILLLELVIGKKPIDIMFEG 849 (949)
Q Consensus 813 E~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~~~~~ 849 (949)
.++..=.-.+=+++..+++++..|+.-..+
T Consensus 134 -------~~ee~fL~qyKAliiall~~K~~Fe~l~~G 163 (215)
T 4ann_A 134 -------VSEAEFLTRYKALVICAFNEKQSFDALVEG 163 (215)
T ss_dssp -------CCHHHHHHHHHHHHHHHHCTTCCHHHHHHS
T ss_pred -------CCHHHHHHHHHHHHHHHHcCCCCHHHHHcC
Confidence 111112335677889999999999754444
No 449
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=71.59 E-value=0.44 Score=53.58 Aligned_cols=62 Identities=6% Similarity=0.014 Sum_probs=18.2
Q ss_pred CCCCeeeeecCceEEEEEEcCCCEEEEE------EEEecCC--CcchHHHHHHHHHHHhcCCCcceeEEeeee
Q 039533 629 SSANLVGVGSFGSVYKGIIDEGRTTIAV------KVFNLQH--HGASRSFIAECKALKSIRHRNLVKVLTACL 693 (949)
Q Consensus 629 ~~~~~lg~G~~g~Vy~~~~~~~~~~vav------K~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~ 693 (949)
.+.+.+| ||.||+|.+.....+||| |..+... .+....+.+|..++++.+|||+++.+++..
T Consensus 145 ~l~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~ 214 (463)
T 3cxl_A 145 PIYEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFKV 214 (463)
T ss_dssp CSTTTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEEE
T ss_pred cccccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceEE
Confidence 3456676 999999999755567888 7654322 222356888999999999999999887754
No 450
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=64.69 E-value=4 Score=40.04 Aligned_cols=83 Identities=17% Similarity=0.177 Sum_probs=60.8
Q ss_pred CCCHHHHHHHHHHHHHHHH-HHhhCCCCCeEecCCCCCCeeecCCCceEEeecccceecCCCCCccccccccCccCccCc
Q 039533 734 NLNLLQRLNIAIDIAYALN-YLHHDCQPVTAHCDLKPSNVLLDDYMTARVGDFGLARILSPDHTQTSSFSVKGSLGYIAP 812 (949)
Q Consensus 734 ~l~~~~~~~i~~qi~~gL~-~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aP 812 (949)
..+..++++++.+++.... ++++ -+|--+.|+||++|.++.+++.-.|+-..+ +|
T Consensus 81 ~~~~~eKlrll~nl~~L~~~~~~~-----r~tf~l~P~NL~f~~~~~p~i~hRGi~~~l-------------------pP 136 (219)
T 4ano_A 81 KTTLLSRIRAAIHLVSKVKHHSAR-----RLIFIVCPENLMFNRALEPFFLHVGVKESL-------------------PP 136 (219)
T ss_dssp TSCHHHHHHHHHHHHHHHSSCCSS-----SEECCCCGGGEEECTTCCEEESCCEETTTB-------------------SS
T ss_pred hcCHHHHHHHHHHHHHHHHHhhhC-----ceeEEEeCceEEEeCCCcEEEEEcCCcccC-------------------CC
Confidence 4788899999999998887 6663 478889999999999999999988764332 22
Q ss_pred cccCCCccCCccchHHHHHHHHHHHhCCCCCcc
Q 039533 813 EYGVGCEVSTNGDVYSYGILLLELVIGKKPIDI 845 (949)
Q Consensus 813 E~~~~~~~~~~sDiwSlGvvl~elltg~~Pf~~ 845 (949)
.-+. +.-=.-.+=|++..++.++..|+.
T Consensus 137 ~e~~-----ee~fl~qyKali~all~~K~~Fe~ 164 (219)
T 4ano_A 137 DEWD-----DERLLREVKATVLALTEGEYRFDE 164 (219)
T ss_dssp CSCC-----HHHHHHHHHHHHHHHTTCSSCHHH
T ss_pred CCCC-----HHHHHHHHHHHHHHHHcCCCCHHH
Confidence 2211 111133566788889999988863
No 451
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=33.08 E-value=5.4 Score=27.85 Aligned_cols=7 Identities=14% Similarity=0.368 Sum_probs=2.7
Q ss_pred eEEeecc
Q 039533 595 CLVRKIK 601 (949)
Q Consensus 595 ~~~~~~~ 601 (949)
++.|+++
T Consensus 33 ~~~RRr~ 39 (44)
T 2ks1_B 33 LFMRRRH 39 (44)
T ss_dssp HHHHTTT
T ss_pred HHhhhhH
Confidence 3334333
No 452
>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A
Probab=31.76 E-value=4.9 Score=27.09 Aligned_cols=24 Identities=33% Similarity=0.552 Sum_probs=11.3
Q ss_pred eeeehhHHHHHHHHHhhheeeEEe
Q 039533 575 VIAIVFRLLGLALALFGLVLCLVR 598 (949)
Q Consensus 575 i~~~~~~~l~~~~~~~~~~~~~~~ 598 (949)
+..++++.++++.++.++.++++|
T Consensus 13 IAGiVvG~v~gv~li~~l~~~~~r 36 (38)
T 2k1k_A 13 IVAVIFGLLLGAALLLGILVFRSR 36 (38)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred eeeeehHHHHHHHHHHHHHHHHee
Confidence 455555555544444444444333
No 453
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=30.96 E-value=89 Score=26.09 Aligned_cols=47 Identities=11% Similarity=0.034 Sum_probs=28.9
Q ss_pred cccCCCCCCCCCCCcccEEEeecceecccCCCcccccCCCCEEecCCc
Q 039533 305 KIYGSIPAGIGNFVNLQRLDMWNNQLSGTIPPAIGELQNLKILGLNRN 352 (949)
Q Consensus 305 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N 352 (949)
.++.+-...|.++++|+.+.|-.+ ++.+-..+|.++.+|+.+.+...
T Consensus 7 ~vt~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~~ 53 (100)
T 2lz0_A 7 PVVGMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTGE 53 (100)
T ss_dssp CCCSSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECCS
T ss_pred ccCEecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcCC
Confidence 344445566777777777777654 33355566777777777766543
No 454
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=29.53 E-value=97 Score=25.85 Aligned_cols=40 Identities=10% Similarity=0.232 Sum_probs=20.9
Q ss_pred CcccccccccceeecccccccccCCCCCCCCCCCcEEEeeC
Q 039533 359 PPSIGNLKMLLNLFLNDNFLEVSIPSSLGQCESLIEINLSN 399 (949)
Q Consensus 359 p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~ 399 (949)
..+|.++++|+.+.+-.+ ++.+-..+|.++.+|+.+.+..
T Consensus 13 ~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~ 52 (100)
T 2lz0_A 13 KSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTG 52 (100)
T ss_dssp SCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECC
T ss_pred HHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcC
Confidence 344555555555555443 3334455666666666666654
No 455
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=27.86 E-value=4.6 Score=28.08 Aligned_cols=8 Identities=38% Similarity=0.567 Sum_probs=3.4
Q ss_pred eeehhHHH
Q 039533 576 IAIVFRLL 583 (949)
Q Consensus 576 ~~~~~~~l 583 (949)
++++++++
T Consensus 15 a~~vVGvl 22 (44)
T 2jwa_A 15 ISAVVGIL 22 (44)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 34444444
No 456
>3ox7_P MH027; urokinase-type plasminogen activator, peptidyl inhibitor, pharmacophore, hydrolase, hydrolase-hydrolase inhibitor COM; HET: PG4; 1.58A {Homo sapiens} PDB: 3oy5_P 3oy6_P
Probab=22.83 E-value=18 Score=20.10 Aligned_cols=9 Identities=33% Similarity=1.058 Sum_probs=6.9
Q ss_pred CcceeeeeE
Q 039533 51 HFCKWYGVT 59 (949)
Q Consensus 51 ~~C~w~gv~ 59 (949)
..|+|+|..
T Consensus 6 gacswrgle 14 (23)
T 3ox7_P 6 GACSWRGLE 14 (26)
T ss_pred cccccccch
Confidence 469999964
No 457
>1cja_A Protein (actin-fragmin kinase); transferase; HET: AMP; 2.90A {Physarum polycephalum} SCOP: d.144.1.3
Probab=21.34 E-value=2.8e+02 Score=28.93 Aligned_cols=77 Identities=14% Similarity=0.094 Sum_probs=42.0
Q ss_pred cceeEeeeccCCChhhhcCCCCCCCccccCCCCCCHHHHHHHHHHH--HHHHHHHhhCC-CCCeEe-cCCCCCCeeecCC
Q 039533 702 FKASVYEFMHYGSLEEWLHPFTGEDEIDEAPRNLNLLQRLNIAIDI--AYALNYLHHDC-QPVTAH-CDLKPSNVLLDDY 777 (949)
Q Consensus 702 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi--~~gL~~LH~~~-~~~ivH-rDlkp~NIll~~~ 777 (949)
...++|+|.+|..|.+.-+.. ....+..+ .+.++ +-++..+..+. +.+.++ .--.++|||++++
T Consensus 156 ~~~l~meyv~G~~L~e~~~~~--------~~~~f~~~----~~k~LG~Ii~FDi~InN~DR~Pl~W~n~GN~~NIL~~~~ 223 (342)
T 1cja_A 156 ANILLMELVRGITLNKLTTTS--------APEVLTKS----TMQQLGSLMALDVIVNNSDRLPIAWTNEGNLDNIMLSER 223 (342)
T ss_dssp SEEEEEECCCEEESTTCCSSS--------HHHHSCHH----HHHHHHHHHHHHHHHTCCSSSCSSSCSCCCGGGEEEESB
T ss_pred cceehhhhcCCCccccchhhh--------hhhhcCHH----HHHhhchhheehhhhcCCccCcccccCCCChhheEEeCC
Confidence 456899999976665543210 00112222 22332 33455555443 222222 2257899999765
Q ss_pred Cc-eEEeeccccee
Q 039533 778 MT-ARVGDFGLARI 790 (949)
Q Consensus 778 ~~-~kl~DfG~a~~ 790 (949)
+. +.++|-+.+..
T Consensus 224 n~~~~~IDhn~af~ 237 (342)
T 1cja_A 224 GATVVPIDSKIIPL 237 (342)
T ss_dssp TTCEEECSCCCCCC
T ss_pred CCeEEEEcCCcccc
Confidence 54 88999988754
Done!