BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>039534
MAGTSTNLSRHLLCSMHSSSSSYYYNSKQTKSSSTPGKFRIFNRRNLTCSARLKSAPHKK
KTASTSLQTSPPDPSRFSLSGSFSLINIIARLSDGFKFDELGLEIWSIALPAALALAADP
IASLIDTAFVGHLGSVELAAVGVSVSVFNLVSKLFNVPLLNITTSFVAEEQAVKSQGSDD
GSSQIDHGVEQQGKKLLPSISTSLALAAGIGIAEALALSFGSGFLMNIMGIPADSPMRVP
AENFLNLRAFGAPPIVIALAAQGAFRGFMDTKTPLYAIGAGNLINAILDPILIFFFHFGI
GGAAIATVISEYLIAFILIWKLSDNVLLMSPDIDGRRVVHYLKSGGLLIGRTIAVLLTMT
LATSMAAREGPIPWLVIRSV

High Scoring Gene Products

Symbol, full name Information P value
AT2G38330 protein from Arabidopsis thaliana 2.5e-74
AT4G38380 protein from Arabidopsis thaliana 1.4e-48
AT1G51340 protein from Arabidopsis thaliana 1.2e-43
FRD3
FERRIC REDUCTASE DEFECTIVE 3
protein from Arabidopsis thaliana 9.6e-41

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  039534
        (380 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2057135 - symbol:AT2G38330 "AT2G38330" species...   750  2.5e-74   1
TAIR|locus:2121783 - symbol:AT4G38380 species:3702 "Arabi...   507  1.4e-48   1
TAIR|locus:2008236 - symbol:AT1G51340 species:3702 "Arabi...   308  1.2e-43   2
TAIR|locus:2077477 - symbol:FRD3 "FERRIC REDUCTASE DEFECT...   309  9.6e-41   2


>TAIR|locus:2057135 [details] [associations]
            symbol:AT2G38330 "AT2G38330" species:3702 "Arabidopsis
            thaliana" [GO:0005215 "transporter activity" evidence=ISS]
            [GO:0005886 "plasma membrane" evidence=ISM] [GO:0006855 "drug
            transmembrane transport" evidence=IEA] [GO:0015238 "drug
            transmembrane transporter activity" evidence=IEA] [GO:0015297
            "antiporter activity" evidence=IEA;ISS] [GO:0016020 "membrane"
            evidence=IEA;ISS] [GO:0055085 "transmembrane transport"
            evidence=IEA] InterPro:IPR002528 Pfam:PF01554 GO:GO:0016021
            EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0031969 GO:GO:0015238
            GO:GO:0015297 eggNOG:COG0534 TIGRFAMs:TIGR00797 EMBL:AC004683
            UniGene:At.37311 UniGene:At.74107 HOGENOM:HOG000253153
            EMBL:BT004001 EMBL:BT005521 IPI:IPI00529504 PIR:T02512
            RefSeq:NP_181367.2 ProteinModelPortal:Q84K71 IntAct:Q84K71
            PaxDb:Q84K71 PRIDE:Q84K71 EnsemblPlants:AT2G38330.1 GeneID:818413
            KEGG:ath:AT2G38330 TAIR:At2g38330 InParanoid:Q84K71 OMA:FAYDGVF
            PhylomeDB:Q84K71 ProtClustDB:CLSN2918200 Genevestigator:Q84K71
            Uniprot:Q84K71
        Length = 521

 Score = 750 (269.1 bits), Expect = 2.5e-74, P = 2.5e-74
 Identities = 171/329 (51%), Positives = 209/329 (63%)

Query:    44 RRNLTCSARLKSAPHKKKTA-STSLQTSPPDPSRFSLSGSFSLINIIARLSDGFKFDELG 102
             RR + C    KS+P  +  A STS Q   P+  +  L+ S +  +   +   G    ++G
Sbjct:    27 RRTIVC----KSSPRDESPAVSTSSQR--PEKQQNPLT-SQNKPDHDHKPDPGI--GKIG 77

Query:   103 LEIWXXXXXXXXXXXXXXXXXXXXTAFVGHLGSVELAAVGVSVSVFNLVSKLFNVPLLNI 162
             +EI                     TAFVGH+GS ELAAVGVSVSVFNLVSKLFNVPLLN+
Sbjct:    78 MEIMSIALPAALALAADPITSLVDTAFVGHIGSAELAAVGVSVSVFNLVSKLFNVPLLNV 137

Query:   163 TTSFVAEEQAVKXXXXXXXXXXIDHGVEQQGKKLLPSISTSXXXXXXXXXXXXXXXSFGS 222
             TTSFVAEEQA+            D+   +  KK+LPS+STS               S GS
Sbjct:   138 TTSFVAEEQAIAAKD--------DNDSIETSKKVLPSVSTSLVLAAGVGIAEAIALSLGS 189

Query:   223 GFLMNIMGIPADSPMRVPAENFLNLRAFGAPPIVIALAAQGAFRGFMDTKTPLYAIGAGN 282
              FLM++M IP DSPMR+PAE FL LRA+GAPPIV+ALAAQGAFRGF DT TPLYA+ AGN
Sbjct:   190 DFLMDVMAIPFDSPMRIPAEQFLRLRAYGAPPIVVALAAQGAFRGFKDTTTPLYAVVAGN 249

Query:   283 LINAILDPILXXXXXXXXXXXXXXTVISEYLIAFILIWKLSDNVLLMSPDIDGRRVVHYL 342
             ++NA+LDPIL              TVISEYLIAFIL+WKL++NV+L+SP I   R   YL
Sbjct:   250 VLNAVLDPILIFVLGFGISGAAAATVISEYLIAFILLWKLNENVVLLSPQIKVGRANQYL 309

Query:   343 KSGGLLIGRTIAVLLTMTLATSMAAREGP 371
             KSGGLLIGRT+A+L+  TLATS+AA+ GP
Sbjct:   310 KSGGLLIGRTVALLVPFTLATSLAAQNGP 338


>TAIR|locus:2121783 [details] [associations]
            symbol:AT4G38380 species:3702 "Arabidopsis thaliana"
            [GO:0005886 "plasma membrane" evidence=ISM] [GO:0006855 "drug
            transmembrane transport" evidence=IEA] [GO:0015238 "drug
            transmembrane transporter activity" evidence=IEA] [GO:0015297
            "antiporter activity" evidence=IEA] [GO:0016020 "membrane"
            evidence=IEA] [GO:0055085 "transmembrane transport" evidence=IEA]
            [GO:0009507 "chloroplast" evidence=IDA] InterPro:IPR002528
            Pfam:PF01554 GO:GO:0016021 GO:GO:0009507 EMBL:CP002687
            GenomeReviews:CT486007_GR GO:GO:0031969 GO:GO:0015238 GO:GO:0015297
            TIGRFAMs:TIGR00797 EMBL:AL161593 EMBL:AL035539 IPI:IPI00528910
            PIR:T05666 RefSeq:NP_195551.5 UniGene:At.65831
            ProteinModelPortal:Q9SVE7 PRIDE:Q9SVE7 EnsemblPlants:AT4G38380.1
            GeneID:829995 KEGG:ath:AT4G38380 TAIR:At4g38380 OMA:EMFIPAR
            Genevestigator:Q9SVE7 Uniprot:Q9SVE7
        Length = 560

 Score = 507 (183.5 bits), Expect = 1.4e-48, P = 1.4e-48
 Identities = 107/247 (43%), Positives = 149/247 (60%)

Query:   127 TAFVGHLGSVELAAVGVSVSVFNLVSKLFNVPLLNITTSFVAEEQAVKXXXXXXXXXXID 186
             TA++G LGSVEL + GVS+++FN +SKLFN+PLL++ TSFVAE+ A K            
Sbjct:   131 TAYIGRLGSVELGSAGVSMAIFNTISKLFNIPLLSVATSFVAEDIA-KIAAQDLASEDSQ 189

Query:   187 HGVEQQG---KKLLPSISTSXXXXXXXXXXXXXXXSFGSGFLMNIMGIPADSPMRVPAEN 243
               +  QG   +K L S+ST+               S  SG  + +MGI + S M +PA  
Sbjct:   190 SDIPSQGLPERKQLSSVSTALVLAIGIGIFEALALSLASGPFLRLMGIQSMSEMFIPARQ 249

Query:   244 FLNLRAFGAPPIVIALAAQGAFRGFMDTKTPLYAIGAGNLINAILDPILXXXXXXXXXXX 303
             FL LRA GAP  V++LA QG FRGF DTKTP+Y +G GN +   L P+            
Sbjct:   250 FLVLRALGAPAYVVSLALQGIFRGFKDTKTPVYCLGIGNFLAVFLFPLFIYKFRMGVAGA 309

Query:   304 XXXTVISEYLIAFILIWKLSDNVLLMSPDIDGRRVVHYLKSGGLLIGRTIAVLLTMTLAT 363
                +VIS+Y +A +++  L+  V+L+ P I   +   YLKSGG ++GRT++VL+TMT+AT
Sbjct:   310 AISSVISQYTVAILMLILLNKRVILLPPKIGSLKFGDYLKSGGFVLGRTLSVLVTMTVAT 369

Query:   364 SMAAREG 370
             SMAAR+G
Sbjct:   370 SMAARQG 376


>TAIR|locus:2008236 [details] [associations]
            symbol:AT1G51340 species:3702 "Arabidopsis thaliana"
            [GO:0005886 "plasma membrane" evidence=ISM] [GO:0006855 "drug
            transmembrane transport" evidence=IEA] [GO:0015238 "drug
            transmembrane transporter activity" evidence=IEA] [GO:0015297
            "antiporter activity" evidence=IEA] [GO:0016020 "membrane"
            evidence=IEA] [GO:0055085 "transmembrane transport" evidence=IEA]
            [GO:0019761 "glucosinolate biosynthetic process" evidence=RCA]
            InterPro:IPR002528 Pfam:PF01554 GO:GO:0016021 EMBL:CP002684
            GenomeReviews:CT485782_GR GO:GO:0005886 GO:GO:0015238 GO:GO:0015297
            eggNOG:COG0534 TIGRFAMs:TIGR00797 GO:GO:0005216 EMBL:AC006085
            OMA:GAEMRNS HOGENOM:HOG000253153 EMBL:BX818238 IPI:IPI00518906
            IPI:IPI00524609 PIR:D96551 RefSeq:NP_564588.2 RefSeq:NP_974000.1
            UniGene:At.26628 ProteinModelPortal:Q9SYD6 PaxDb:Q9SYD6
            PRIDE:Q9SYD6 EnsemblPlants:AT1G51340.2 GeneID:841557
            KEGG:ath:AT1G51340 TAIR:At1g51340 InParanoid:Q9SYD6
            PhylomeDB:Q9SYD6 ProtClustDB:CLSN2918502 Genevestigator:Q9SYD6
            Uniprot:Q9SYD6
        Length = 515

 Score = 308 (113.5 bits), Expect = 1.2e-43, Sum P(2) = 1.2e-43
 Identities = 63/146 (43%), Positives = 91/146 (62%)

Query:   225 LMNIMGIPADSPMRVPAENFLNLRAFGAPPIVIALAAQGAFRGFMDTKTPLYAIGAGNLI 284
             L++ MG+  DSPM  P++ +L+LR+ GAP ++++LAAQG FRGF DT TPL+A   G++ 
Sbjct:   192 LLSFMGVKHDSPMMRPSQRYLSLRSLGAPAVLLSLAAQGVFRGFKDTTTPLFATVIGDVT 251

Query:   285 NAILDPILXXXXXXXXXXXXXXTVISEYLIAFILIWKLSDNVLLMSPDIDGRRVVHYLKS 344
             N ILDPI                VIS+YL+  IL+WKL   V + +      +   ++K+
Sbjct:   252 NIILDPIFIFVFRLGVTGAATAHVISQYLMCGILLWKLMGQVDIFNMSTKHLQFCRFMKN 311

Query:   345 GGLLIGRTIAVLLTMTLATSMAAREG 370
             G LL+ R IAV   +TL+ S+AAREG
Sbjct:   312 GFLLLMRVIAVTFCVTLSASLAAREG 337

 Score = 178 (67.7 bits), Expect = 1.2e-43, Sum P(2) = 1.2e-43
 Identities = 39/76 (51%), Positives = 48/76 (63%)

Query:    97 KFDELGLEIWXXXXXXXXXXXXXXXXXXXXTAFVGHLGSVELAAVGVSVSVFNLVSKLFN 156
             KFDELGLEI                     TAF+G +G VELAAVGVS+++FN VS++  
Sbjct:    28 KFDELGLEIARIALPAALALTADPIASLVDTAFIGQIGPVELAAVGVSIALFNQVSRIAI 87

Query:   157 VPLLNITTSFVAEEQA 172
              PL++ITTSFVAEE A
Sbjct:    88 FPLVSITTSFVAEEDA 103


>TAIR|locus:2077477 [details] [associations]
            symbol:FRD3 "FERRIC REDUCTASE DEFECTIVE 3" species:3702
            "Arabidopsis thaliana" [GO:0005886 "plasma membrane"
            evidence=ISM;IDA] [GO:0006855 "drug transmembrane transport"
            evidence=IEA] [GO:0015238 "drug transmembrane transporter activity"
            evidence=IEA] [GO:0015297 "antiporter activity" evidence=IEA;ISS]
            [GO:0016020 "membrane" evidence=IEA;ISS] [GO:0055085 "transmembrane
            transport" evidence=IEA] [GO:0005215 "transporter activity"
            evidence=ISS] [GO:0006879 "cellular iron ion homeostasis"
            evidence=IMP] [GO:0015137 "citrate transmembrane transporter
            activity" evidence=IDA] [GO:0071281 "cellular response to iron ion"
            evidence=IEP] [GO:0071369 "cellular response to ethylene stimulus"
            evidence=IEP] [GO:0071732 "cellular response to nitric oxide"
            evidence=IEP] [GO:0006826 "iron ion transport" evidence=RCA]
            [GO:0010106 "cellular response to iron ion starvation"
            evidence=RCA] [GO:0010167 "response to nitrate" evidence=RCA]
            [GO:0010413 "glucuronoxylan metabolic process" evidence=RCA]
            [GO:0015706 "nitrate transport" evidence=RCA] [GO:0045492 "xylan
            biosynthetic process" evidence=RCA] InterPro:IPR002528 Pfam:PF01554
            GO:GO:0016021 GO:GO:0005886 EMBL:CP002686 GenomeReviews:BA000014_GR
            GO:GO:0071281 GO:GO:0006879 GO:GO:0015238 GO:GO:0071732
            GO:GO:0015297 EMBL:AC013483 eggNOG:COG0534 TIGRFAMs:TIGR00797
            GO:GO:0005216 GO:GO:0071369 EMBL:AC074395 EMBL:AF448231
            EMBL:AY056439 EMBL:AY057517 EMBL:AY133652 EMBL:BT006370
            IPI:IPI00531718 RefSeq:NP_001154595.1 RefSeq:NP_187461.1
            UniGene:At.17333 ProteinModelPortal:Q9SFB0 IntAct:Q9SFB0
            STRING:Q9SFB0 PRIDE:Q9SFB0 EnsemblPlants:AT3G08040.1
            EnsemblPlants:AT3G08040.2 GeneID:819995 KEGG:ath:AT3G08040
            TAIR:At3g08040 HOGENOM:HOG000253153 InParanoid:Q9SFB0 OMA:ARSARHY
            PhylomeDB:Q9SFB0 ProtClustDB:CLSN2915580 Genevestigator:Q9SFB0
            GO:GO:0015137 Uniprot:Q9SFB0
        Length = 526

 Score = 309 (113.8 bits), Expect = 9.6e-41, Sum P(2) = 9.6e-41
 Identities = 66/154 (42%), Positives = 91/154 (59%)

Query:   220 FGSGFLMNIMGIPADSPMRVPAENFLNLRAFGAPPIVIALAAQGAFRGFMDTKTPLYAIG 279
             F S  L+ +MG+  +SPM  PA  +L++RA GAP ++++LA QG FRGF DTKTPL+A  
Sbjct:   191 FSSKLLLGVMGVKPNSPMLSPAHKYLSIRALGAPALLLSLAMQGIFRGFKDTKTPLFATV 250

Query:   280 AGNLINAILDPILXXXXXXXXXXXXXXTVISEYLIAFILIWKLSDNVLLMSPDIDGRRVV 339
               ++IN +LDPI                VIS+Y +  IL   L+  V L+ P+    +  
Sbjct:   251 VADVINIVLDPIFIFVLRLGIIGAAIAHVISQYFMTLILFVFLAKKVNLIPPNFGDLQFG 310

Query:   340 HYLKSGGLLIGRTIAVLLTMTLATSMAAREGPIP 373
              +LK+G LL+ RTIAV    TLA +MAAR G  P
Sbjct:   311 RFLKNGLLLLARTIAVTFCQTLAAAMAARLGTTP 344

 Score = 150 (57.9 bits), Expect = 9.6e-41, Sum P(2) = 9.6e-41
 Identities = 33/79 (41%), Positives = 45/79 (56%)

Query:    96 FKFDELGLEIWXXXXXXXXXXXXXXXXXXXXTAFVGHLGSVELAAVGVSVSVFNLVSKLF 155
             F  D  G EI                     TAFVG LG+V+LAAVGVS+++FN  S++ 
Sbjct:    28 FSRDTTGREILGIAFPAALALAADPIASLIDTAFVGRLGAVQLAAVGVSIAIFNQASRIT 87

Query:   156 NVPLLNITTSFVAEEQAVK 174
               PL+++TTSFVAEE  ++
Sbjct:    88 IFPLVSLTTSFVAEEDTME 106


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.322   0.137   0.399    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      380       303   0.00097  115 3  11 22  0.49    33
                                                     33  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  4
  No. of states in DFA:  598 (64 KB)
  Total size of DFA:  174 KB (2101 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  20.22u 0.07s 20.29t   Elapsed:  00:00:03
  Total cpu time:  20.22u 0.07s 20.29t   Elapsed:  00:00:03
  Start:  Sat May 11 06:00:18 2013   End:  Sat May 11 06:00:21 2013

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