BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 039537
(103 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q851R2|MEL1_ORYSJ Protein argonaute MEL1 OS=Oryza sativa subsp. japonica GN=MEL1 PE=2
SV=1
Length = 1058
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 55/101 (54%), Positives = 76/101 (75%)
Query: 1 MKELLEKHGKTHFNGCLPAYDGRKGFYTAGALPFTSKDFNIKLIDRDESGDIKREREFKV 60
+ EL++ HGKT G LPAYDGRK YTAG+LPF S++F +KLID ++ + ERE+K+
Sbjct: 249 LNELIKLHGKTSLGGKLPAYDGRKSLYTAGSLPFESEEFVVKLIDPEKKDKERAEREYKI 308
Query: 61 SVKLASRADINHLRQFLQCKSREAPHDIIQVLDVVLRESPS 101
++++A R D+ HL+QFL + R+ P + IQVLDVVLRESPS
Sbjct: 309 TIRIAGRTDLYHLQQFLLGRQRDMPQETIQVLDVVLRESPS 349
>sp|O04379|AGO1_ARATH Protein argonaute 1 OS=Arabidopsis thaliana GN=AGO1 PE=1 SV=1
Length = 1048
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 54/104 (51%), Positives = 75/104 (72%), Gaps = 1/104 (0%)
Query: 1 MKELLEKHGKTHFNGCLPAYDGRKGFYTAGALPFTSKDFNIKLIDRD-ESGDIKREREFK 59
MK+L++ + +H LPAYDGRK YTAG LPF SK+F I L+D + +G +REREFK
Sbjct: 229 MKQLVDNYRDSHLGSRLPAYDGRKSLYTAGPLPFNSKEFRINLLDEEVGAGGQRREREFK 288
Query: 60 VSVKLASRADINHLRQFLQCKSREAPHDIIQVLDVVLRESPSKK 103
V +KL +RAD++HL FL+ K +AP + +QVLD+VLRE P+ +
Sbjct: 289 VVIKLVARADLHHLGMFLEGKQSDAPQEALQVLDIVLRELPTSR 332
>sp|Q5Z5B2|AGO1D_ORYSJ Protein argonaute 1D OS=Oryza sativa subsp. japonica GN=AGO1D PE=2
SV=1
Length = 1038
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 52/104 (50%), Positives = 74/104 (71%), Gaps = 1/104 (0%)
Query: 1 MKELLEKHGKTHFNGCLPAYDGRKGFYTAGALPFTSKDFNIKLIDRDE-SGDIKREREFK 59
M+EL+ H ++ G LPAYDGRK YTAG LPFTSK+F I L++ D+ SG +R++ +
Sbjct: 221 MEELVRLHKMSYLGGRLPAYDGRKSLYTAGPLPFTSKEFRISLLEEDDGSGSERRQKTYN 280
Query: 60 VSVKLASRADINHLRQFLQCKSREAPHDIIQVLDVVLRESPSKK 103
V +K A+RAD++ L QFL + EAP + +QVLD+VLRE P+ +
Sbjct: 281 VVIKFAARADLHRLEQFLAGRQAEAPQEALQVLDIVLRELPTAR 324
>sp|Q6K972|AGO1C_ORYSJ Protein argonaute 1C OS=Oryza sativa subsp. japonica GN=AGO1C PE=2
SV=1
Length = 1011
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 53/104 (50%), Positives = 74/104 (71%), Gaps = 1/104 (0%)
Query: 1 MKELLEKHGKTHFNGCLPAYDGRKGFYTAGALPFTSKDFNIKLIDRDE-SGDIKREREFK 59
+KEL+ + ++ G LPAYDGRK YTAG LPFTS++F I L+D D+ SG +R+R F+
Sbjct: 193 IKELVNLYKASYLGGRLPAYDGRKSLYTAGPLPFTSQEFQITLLDDDDGSGSERRQRTFR 252
Query: 60 VSVKLASRADINHLRQFLQCKSREAPHDIIQVLDVVLRESPSKK 103
V +K A+RAD++ L FL + EAP + +QVLD+VLRE PS +
Sbjct: 253 VVIKFAARADLHRLELFLAGRHAEAPQEALQVLDIVLRELPSAR 296
>sp|Q6EU14|AGO1A_ORYSJ Protein argonaute 1A OS=Oryza sativa subsp. japonica GN=AGO1A PE=2
SV=1
Length = 1082
Score = 108 bits (269), Expect = 1e-23, Method: Composition-based stats.
Identities = 51/106 (48%), Positives = 73/106 (68%), Gaps = 5/106 (4%)
Query: 3 ELLEKHGKTHFNGCLPAYDGRKGFYTAGALPFTSKDFNIKLIDRDES-----GDIKRERE 57
E++ ++ ++H G LP YDGRK YTAG LPFTS+ F++ L D +ES G +RER
Sbjct: 259 EIVTQYRQSHLGGRLPVYDGRKSLYTAGPLPFTSRTFDVILQDEEESLAVGQGAQRRERP 318
Query: 58 FKVSVKLASRADINHLRQFLQCKSREAPHDIIQVLDVVLRESPSKK 103
FKV +K A+RAD++HL FL + +AP + +QVLD+VLRE P+ +
Sbjct: 319 FKVVIKFAARADLHHLAMFLAGRQADAPQEALQVLDIVLRELPTAR 364
>sp|Q9SJK3|AGO5_ARATH Protein argonaute 5 OS=Arabidopsis thaliana GN=AGO5 PE=1 SV=2
Length = 997
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 52/101 (51%), Positives = 68/101 (67%)
Query: 1 MKELLEKHGKTHFNGCLPAYDGRKGFYTAGALPFTSKDFNIKLIDRDESGDIKREREFKV 60
MK L++ + +H G PAYDGRK YTAG LPF SK+F + L ++ G ++R FKV
Sbjct: 197 MKLLVKNYKDSHLGGKSPAYDGRKSLYTAGPLPFDSKEFVVNLAEKRADGSSGKDRPFKV 256
Query: 61 SVKLASRADINHLRQFLQCKSREAPHDIIQVLDVVLRESPS 101
+VK + D+ L+QFL K REAP+D IQVLDVVLR+ PS
Sbjct: 257 AVKNVTSTDLYQLQQFLDRKQREAPYDTIQVLDVVLRDKPS 297
>sp|Q69VD5|PNH1_ORYSJ Protein argonaute PNH1 OS=Oryza sativa subsp. japonica GN=PHN1 PE=2
SV=1
Length = 979
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 49/104 (47%), Positives = 75/104 (72%), Gaps = 1/104 (0%)
Query: 1 MKELLEKHGKTHFNGCLPAYDGRKGFYTAGALPFTSKDFNIKLIDRDE-SGDIKREREFK 59
M EL+ + + G LPAYDGRK YTAG LPF +++F ++L D D+ +G RERE++
Sbjct: 174 MSELVRLYHDSDLGGRLPAYDGRKNLYTAGTLPFDAREFVVRLTDDDDGTGVPPREREYR 233
Query: 60 VSVKLASRADINHLRQFLQCKSREAPHDIIQVLDVVLRESPSKK 103
V++K A+RAD++HLRQF+ + +AP + +QVLD+VLRE +++
Sbjct: 234 VAIKFAARADLHHLRQFIAGRQADAPQEALQVLDIVLRELANRR 277
>sp|Q7XSA2|AGO1B_ORYSJ Protein argonaute 1B OS=Oryza sativa subsp. japonica GN=AGO1B PE=2
SV=3
Length = 1118
Score = 105 bits (261), Expect = 1e-22, Method: Composition-based stats.
Identities = 52/108 (48%), Positives = 71/108 (65%), Gaps = 5/108 (4%)
Query: 1 MKELLEKHGKTHFNGCLPAYDGRKGFYTAGALPFTSKDFNIKLIDRDES-----GDIKRE 55
M EL+ + +H G LPAYDGRK YTAG LPF S+ F I L D ++S G +RE
Sbjct: 294 MFELVTLYRYSHLGGRLPAYDGRKSLYTAGPLPFASRTFEITLQDEEDSLGGGQGTQRRE 353
Query: 56 REFKVSVKLASRADINHLRQFLQCKSREAPHDIIQVLDVVLRESPSKK 103
R F+V +K A+RAD++HL FL + +AP + +QVLD+VLRE P+ +
Sbjct: 354 RLFRVVIKFAARADLHHLAMFLAGRQADAPQEALQVLDIVLRELPTTR 401
>sp|Q852N2|AGO13_ORYSJ Protein argonaute 13 OS=Oryza sativa subsp. japonica GN=AGO13 PE=2
SV=1
Length = 1192
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 44/90 (48%), Positives = 64/90 (71%)
Query: 1 MKELLEKHGKTHFNGCLPAYDGRKGFYTAGALPFTSKDFNIKLIDRDESGDIKREREFKV 60
+ EL++ HGKT G LPAYDGRK YTAG+LPF S++F +KLID ++ + ERE+K+
Sbjct: 50 LNELIKLHGKTSLGGKLPAYDGRKSLYTAGSLPFESEEFVVKLIDPEKKDKERAEREYKI 109
Query: 61 SVKLASRADINHLRQFLQCKSREAPHDIIQ 90
++++A R D HL+QFL + R+ P + IQ
Sbjct: 110 TIRIAGRTDFYHLQQFLLGRQRDMPQETIQ 139
>sp|Q9XGW1|AGO10_ARATH Protein argonaute 10 OS=Arabidopsis thaliana GN=AGO10 PE=2 SV=1
Length = 988
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 46/105 (43%), Positives = 71/105 (67%), Gaps = 2/105 (1%)
Query: 1 MKELLEKHGKTHFNGCLPAYDGRKGFYTAGALPFTSKDFNIKLIDRDES--GDIKREREF 58
+ EL+ + ++ LPAYDGRK YTAG LPFT K+F++K++D D+ KRER +
Sbjct: 178 IAELVRLYKESDLGRRLPAYDGRKSLYTAGELPFTWKEFSVKIVDEDDGIINGPKRERSY 237
Query: 59 KVSVKLASRADINHLRQFLQCKSREAPHDIIQVLDVVLRESPSKK 103
KV++K +RA+++HL +FL K + P + +Q+LD+VLRE K+
Sbjct: 238 KVAIKFVARANMHHLGEFLAGKRADCPQEAVQILDIVLRELSVKR 282
>sp|Q6Z4F1|AGO14_ORYSJ Protein argonaute 14 OS=Oryza sativa subsp. japonica GN=AGO14 PE=2
SV=1
Length = 1052
Score = 95.5 bits (236), Expect = 8e-20, Method: Composition-based stats.
Identities = 49/101 (48%), Positives = 63/101 (62%), Gaps = 6/101 (5%)
Query: 1 MKELLEKHGKTHFNGCLPAYDGRKGFYTAGALPFTSKDFNIKLIDRDESGDIKREREFKV 60
M EL H ++H G AYDG K YTAG LPF S DF IKL G RE E+KV
Sbjct: 243 MSELARLHRESHLGGISFAYDGSKALYTAGKLPFDSMDFKIKL------GKELREIEYKV 296
Query: 61 SVKLASRADINHLRQFLQCKSREAPHDIIQVLDVVLRESPS 101
+++ A +AD++HL +F+ + R++ IQ LDVVLRESPS
Sbjct: 297 TIRRAGQADLHHLHEFIAGRQRDSQQQTIQALDVVLRESPS 337
>sp|Q7Y001|AGO12_ORYSJ Protein argonaute 12 OS=Oryza sativa subsp. japonica GN=AGO12 PE=2
SV=2
Length = 1049
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 48/101 (47%), Positives = 65/101 (64%), Gaps = 3/101 (2%)
Query: 1 MKELLEKHGKTHFNGCLPAYDGRKGFYTAGALPFTSKDFNIKLIDRDESGDIKREREFKV 60
+ +L+ H K +G LP YDGRK YTAG LPF +KDF +K I+ +RE E+KV
Sbjct: 243 INKLVALH-KQFLDGRLPVYDGRKSIYTAGPLPFKTKDFVVKHINPLRGN--QREEEYKV 299
Query: 61 SVKLASRADINHLRQFLQCKSREAPHDIIQVLDVVLRESPS 101
++K AS+ D+ L+QFL + RE P D IQ LD+ LRE P+
Sbjct: 300 TIKQASKTDLYSLKQFLVGRQRELPQDTIQALDIALRECPT 340
>sp|Q10F39|AGO11_ORYSJ Protein argonaute 11 OS=Oryza sativa subsp. japonica GN=AGO11 PE=2
SV=2
Length = 892
Score = 68.9 bits (167), Expect = 9e-12, Method: Composition-based stats.
Identities = 37/79 (46%), Positives = 53/79 (67%), Gaps = 3/79 (3%)
Query: 1 MKELLEKHGKTHFNGCLPAYDGRKGFYTAGALPFTSKDFNIKLIDRDESGDIKREREFKV 60
+ ELL H K PAYDGRKG +TAGALPFT ++F +K+ + E G+ + E+EFKV
Sbjct: 176 INELLRSHKKYLDGRRSPAYDGRKGMFTAGALPFTDREFVVKIANDPERGN-QGEKEFKV 234
Query: 61 SVKLASRADI--NHLRQFL 77
++K A A++ + L+QFL
Sbjct: 235 TIKCAGAANLYMHSLKQFL 253
>sp|Q6H6C3|AGO17_ORYSJ Protein argonaute 17 OS=Oryza sativa subsp. japonica GN=AGO17 PE=2
SV=1
Length = 876
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 61/106 (57%), Gaps = 3/106 (2%)
Query: 1 MKELLEKHGKTHFNGCLPAYDGRKGFYTAGALPFTSKDFNIKLIDRDESGDIKRE---RE 57
++EL+++ + G LPAYDGRK YT+G LPF S F + L ++S + R R+
Sbjct: 85 IRELVKQQKDSGLGGRLPAYDGRKRLYTSGPLPFDSHRFLVLLDSIEDSPEESRHLRVRD 144
Query: 58 FKVSVKLASRADINHLRQFLQCKSREAPHDIIQVLDVVLRESPSKK 103
F V++K A++ + LR+F K ++ LDVVL+E P+ +
Sbjct: 145 FVVTLKFAAKISLWTLRKFRGGKPNRESRAALRALDVVLKELPTAR 190
>sp|Q69UP6|AGO18_ORYSJ Protein argonaute 18 OS=Oryza sativa subsp. japonica GN=AGO18 PE=2
SV=1
Length = 1088
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 53/98 (54%), Gaps = 9/98 (9%)
Query: 1 MKELLEKHGKTHFNGCLPAYDGRKGFYTAGALPFTSKDFNIKLIDRDESGDIKREREFKV 60
+ +L+ + T F G LP YDGR YTAG LPF S++ ++L SG R+FKV
Sbjct: 306 ISKLVTERRHTDFGGRLPVYDGRANLYTAGELPFRSRELEVEL-----SG----SRKFKV 356
Query: 61 SVKLASRADINHLRQFLQCKSREAPHDIIQVLDVVLRE 98
+++ + + LR + P +Q+LD+VLR+
Sbjct: 357 AIRHVAPVSLQDLRMVMAGCPAGIPSQALQLLDIVLRD 394
>sp|O77503|AGO2_RABIT Protein argonaute-2 (Fragment) OS=Oryctolagus cuniculus GN=EIF2C2
PE=1 SV=2
Length = 840
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 51/107 (47%), Gaps = 10/107 (9%)
Query: 2 KELLEKHGKTHFNGCL-----PAYDGRKGFYTAGALPFTSKDFNIKLIDRDESGDIKRER 56
+E++E H HF + P +DGRK YTA LP + +++ E D R
Sbjct: 53 REIVE-HMVQHFKAQIFGDRKPVFDGRKNLYTAMPLPIGREKVELEVTLPGEGKD----R 107
Query: 57 EFKVSVKLASRADINHLRQFLQCKSREAPHDIIQVLDVVLRESPSKK 103
FKVS+K S + L L + P + IQ LDVV+R PS +
Sbjct: 108 IFKVSIKWVSCVSLQALHDALSGRLPSVPFETIQALDVVMRHLPSMR 154
>sp|Q6QME8|AGO2_BOVIN Protein argonaute-2 OS=Bos taurus GN=EIF2C2 PE=2 SV=1
Length = 860
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 48/102 (47%), Gaps = 5/102 (4%)
Query: 3 ELLEKHGKTH-FNGCLPAYDGRKGFYTAGALPFTSKDFNIKLIDRDESGDIKREREFKVS 61
E + +H KT F P +DGRK YTA LP +++ E D R FKVS
Sbjct: 77 EHMVQHFKTQIFGDRKPVFDGRKNLYTAMPLPIGRDKVELEVTLPGEGKD----RIFKVS 132
Query: 62 VKLASRADINHLRQFLQCKSREAPHDIIQVLDVVLRESPSKK 103
+K S + L L + P + IQ LDVV+R PS +
Sbjct: 133 IKWVSCVSLQALHDALSGRLPSVPFETIQALDVVMRHLPSMR 174
>sp|Q9UKV8|AGO2_HUMAN Protein argonaute-2 OS=Homo sapiens GN=EIF2C2 PE=1 SV=3
Length = 859
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 48/102 (47%), Gaps = 5/102 (4%)
Query: 3 ELLEKHGKTH-FNGCLPAYDGRKGFYTAGALPFTSKDFNIKLIDRDESGDIKREREFKVS 61
E + +H KT F P +DGRK YTA LP +++ E D R FKVS
Sbjct: 76 EHMVQHFKTQIFGDRKPVFDGRKNLYTAMPLPIGRDKVELEVTLPGEGKD----RIFKVS 131
Query: 62 VKLASRADINHLRQFLQCKSREAPHDIIQVLDVVLRESPSKK 103
+K S + L L + P + IQ LDVV+R PS +
Sbjct: 132 IKWVSCVSLQALHDALSGRLPSVPFETIQALDVVMRHLPSMR 173
>sp|Q9QZ81|AGO2_RAT Protein argonaute-2 OS=Rattus norvegicus GN=Eif2c2 PE=2 SV=2
Length = 860
Score = 53.1 bits (126), Expect = 5e-07, Method: Composition-based stats.
Identities = 36/102 (35%), Positives = 48/102 (47%), Gaps = 5/102 (4%)
Query: 3 ELLEKHGKTH-FNGCLPAYDGRKGFYTAGALPFTSKDFNIKLIDRDESGDIKREREFKVS 61
E + +H KT F P +DGRK YTA LP +++ E D R FKVS
Sbjct: 77 EHMVQHFKTQIFGDRKPVFDGRKNLYTAMPLPIGRDKVELEVTLPGEGKD----RIFKVS 132
Query: 62 VKLASRADINHLRQFLQCKSREAPHDIIQVLDVVLRESPSKK 103
+K S + L L + P + IQ LDVV+R PS +
Sbjct: 133 IKWVSCVSLQALHDALSGRLPSVPFETIQALDVVMRHLPSMR 174
>sp|Q8CJG0|AGO2_MOUSE Protein argonaute-2 OS=Mus musculus GN=Eif2c2 PE=1 SV=3
Length = 860
Score = 53.1 bits (126), Expect = 5e-07, Method: Composition-based stats.
Identities = 36/102 (35%), Positives = 48/102 (47%), Gaps = 5/102 (4%)
Query: 3 ELLEKHGKTH-FNGCLPAYDGRKGFYTAGALPFTSKDFNIKLIDRDESGDIKREREFKVS 61
E + +H KT F P +DGRK YTA LP +++ E D R FKVS
Sbjct: 77 EHMVQHFKTQIFGDRKPVFDGRKNLYTAMPLPIGRDKVELEVTLPGEGKD----RIFKVS 132
Query: 62 VKLASRADINHLRQFLQCKSREAPHDIIQVLDVVLRESPSKK 103
+K S + L L + P + IQ LDVV+R PS +
Sbjct: 133 IKWVSCVSLQALHDALSGRLPSVPFETIQALDVVMRHLPSMR 174
>sp|Q9H9G7|AGO3_HUMAN Protein argonaute-3 OS=Homo sapiens GN=EIF2C3 PE=1 SV=2
Length = 860
Score = 51.6 bits (122), Expect = 1e-06, Method: Composition-based stats.
Identities = 32/101 (31%), Positives = 49/101 (48%), Gaps = 11/101 (10%)
Query: 11 THFNGCLPAYDGRKGFYTAGALPFTSKDFNIKLIDRDESGDIKREREFKVSVKLASRADI 70
T F P YDG++ YTA LP + ++ + E G ++R FKVS+K SR
Sbjct: 77 TIFGDRRPVYDGKRSLYTANPLPVATTGVDLDVTLPGEGG---KDRPFKVSIKFVSRVSW 133
Query: 71 NHLRQFLQCKSREAPHDI--------IQVLDVVLRESPSKK 103
+ L + L ++ P ++ + +DVVLR PS K
Sbjct: 134 HLLHEVLTGRTLPEPLELDKPISTNPVHAVDVVLRHLPSMK 174
>sp|Q9SHF2|AGO3_ARATH Protein argonaute 3 OS=Arabidopsis thaliana GN=AGO3 PE=3 SV=1
Length = 1194
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 48/91 (52%), Gaps = 5/91 (5%)
Query: 13 FNGCLPAYDGRKGFYTAGALPFTSKDFNIKLIDRDESGDIKREREFKVSVKLASRADINH 72
F + AYDG+K ++A LP S +D E+ +I R R + +K +
Sbjct: 401 FPNAMTAYDGQKNIFSAVELPTGSFK-----VDFSETEEIMRGRSYTFIIKQVKELKLLD 455
Query: 73 LRQFLQCKSREAPHDIIQVLDVVLRESPSKK 103
L+ ++ +S P D++Q +DVV++E PSK+
Sbjct: 456 LQAYIDGRSTFIPRDVLQGMDVVMKEHPSKR 486
>sp|Q6T5B7|AGO3_BOVIN Protein argonaute-3 OS=Bos taurus GN=EIF2C3 PE=2 SV=2
Length = 861
Score = 51.2 bits (121), Expect = 2e-06, Method: Composition-based stats.
Identities = 32/101 (31%), Positives = 49/101 (48%), Gaps = 11/101 (10%)
Query: 11 THFNGCLPAYDGRKGFYTAGALPFTSKDFNIKLIDRDESGDIKREREFKVSVKLASRADI 70
T F P YDG++ YTA LP + + +D G+ ++R FKVS+K SR
Sbjct: 77 TIFGDRRPVYDGKRSLYTANPLPVATTGVD---LDATLPGEGGKDRPFKVSIKFVSRVSW 133
Query: 71 NHLRQFLQCKSREAPHDI--------IQVLDVVLRESPSKK 103
+ L + L ++ P ++ + +DVVLR PS K
Sbjct: 134 HLLHEVLTGRTLPEPLELDKPISTNPVHAVDVVLRHLPSMK 174
>sp|Q84VQ0|AGO9_ARATH Protein argonaute 9 OS=Arabidopsis thaliana GN=AGO9 PE=1 SV=2
Length = 896
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 49/101 (48%), Gaps = 16/101 (15%)
Query: 19 AYDGRKGFYTAGALPFTSKDFNIKL----------------IDRDESGDIKREREFKVSV 62
AYDG K +T GALP DF++ L DR S + ++F V +
Sbjct: 110 AYDGEKTLFTVGALPSNKLDFSVVLEEIPSSRNHAGNDTNDADRKRSRRPNQTKKFMVEI 169
Query: 63 KLASRADINHLRQFLQCKSREAPHDIIQVLDVVLRESPSKK 103
A++ + + LQ K E D ++VLD++LR+S +++
Sbjct: 170 SYAAKIPMQAIASALQGKETENLQDALRVLDIILRQSAARQ 210
>sp|Q5ZLG4|AGO3_CHICK Protein argonaute-3 OS=Gallus gallus GN=EIF2C3 PE=2 SV=1
Length = 860
Score = 50.1 bits (118), Expect = 4e-06, Method: Composition-based stats.
Identities = 32/101 (31%), Positives = 48/101 (47%), Gaps = 11/101 (10%)
Query: 11 THFNGCLPAYDGRKGFYTAGALPFTSKDFNIKLIDRDESGDIKREREFKVSVKLASRADI 70
T F P YDG++ YTA LP + ++ + E G ++R FKVS+K SR
Sbjct: 77 TIFGDRRPVYDGKRSLYTANPLPVATTGVDLDVTLPGEGG---KDRPFKVSIKFVSRVSW 133
Query: 71 NHLRQFLQCKSREAP--------HDIIQVLDVVLRESPSKK 103
+ L + L ++ P + + +DVVLR PS K
Sbjct: 134 HLLHEVLTGRTLPEPLEPDKPISTNPVHAVDVVLRHLPSMK 174
>sp|Q8CJF9|AGO3_MOUSE Protein argonaute-3 OS=Mus musculus GN=Eif2c3 PE=2 SV=2
Length = 860
Score = 50.1 bits (118), Expect = 4e-06, Method: Composition-based stats.
Identities = 33/101 (32%), Positives = 48/101 (47%), Gaps = 11/101 (10%)
Query: 11 THFNGCLPAYDGRKGFYTAGALPFTSKDFNIKLIDRDESGDIKREREFKVSVKLASRADI 70
T F P YDG++ YTA LP + ++ + E G ++R FKVSVK SR
Sbjct: 77 TIFGDRRPVYDGKRSLYTANPLPVATTGVDLDVTLPGEGG---KDRPFKVSVKFVSRVSW 133
Query: 71 NHLRQFLQCKSREAPHDI--------IQVLDVVLRESPSKK 103
+ L + L + P ++ + +DVVLR PS K
Sbjct: 134 HLLHEALAGGTLPEPLELDKPVSTNPVHAVDVVLRHLPSMK 174
>sp|Q5ZMW0|AGO4_CHICK Protein argonaute-4 OS=Gallus gallus GN=EIF2C4 PE=2 SV=1
Length = 794
Score = 50.1 bits (118), Expect = 4e-06, Method: Composition-based stats.
Identities = 28/86 (32%), Positives = 42/86 (48%), Gaps = 4/86 (4%)
Query: 18 PAYDGRKGFYTAGALPFTSKDFNIKLIDRDESGDIKREREFKVSVKLASRADINHLRQFL 77
P YDG++ YTA LP ++++ E D + FKVS++ S + L + L
Sbjct: 15 PGYDGKRNMYTAHPLPIGRDRVDMEVTLPGEGKD----QTFKVSIQWVSVVSLQLLLEAL 70
Query: 78 QCKSREAPHDIIQVLDVVLRESPSKK 103
E P D +Q LDV+ R PS +
Sbjct: 71 AGHLNEVPEDSVQALDVITRHLPSMR 96
>sp|A3KPK0|AGO3_DANRE Protein argonaute-3 OS=Danio rerio GN=eif2c3 PE=3 SV=1
Length = 860
Score = 48.9 bits (115), Expect = 1e-05, Method: Composition-based stats.
Identities = 32/101 (31%), Positives = 48/101 (47%), Gaps = 11/101 (10%)
Query: 11 THFNGCLPAYDGRKGFYTAGALPFTSKDFNIKLIDRDESGDIKREREFKVSVKLASRADI 70
T F P YDG+K YTA LP S ++ + E G ++R FKV++K S
Sbjct: 77 TIFGDRRPVYDGKKSLYTAQPLPVASAGVDLDVTLPGEGG---KDRIFKVTIKFVSLVSW 133
Query: 71 NHLRQFLQCKSREAPHDI--------IQVLDVVLRESPSKK 103
+ L + L +S P ++ + +DVVLR PS +
Sbjct: 134 HMLHEVLTGRSTPDPLELDKPISTNPVHAVDVVLRHLPSMR 174
>sp|Q6DJB9|AGO2_XENTR Protein argonaute-2 OS=Xenopus tropicalis GN=eif2c2 PE=2 SV=1
Length = 871
Score = 48.9 bits (115), Expect = 1e-05, Method: Composition-based stats.
Identities = 36/107 (33%), Positives = 56/107 (52%), Gaps = 9/107 (8%)
Query: 2 KELLEKHGKTHFNGCL-----PAYDGRKGFYTAGALPFTSKDFNIKLIDRDESGDIKRER 56
+E++E H HF + P +DGRK YTA LP ++D ++L + G+ K +R
Sbjct: 74 REIVE-HMVQHFKAQIFGDRKPVFDGRKNLYTAMPLPI-ARDKQVEL-EVTLPGEGK-DR 129
Query: 57 EFKVSVKLASRADINHLRQFLQCKSREAPHDIIQVLDVVLRESPSKK 103
FKV++K + + L L + P + IQ LDVV+R PS +
Sbjct: 130 IFKVAIKWMACVSLQALHDALSGRLPSVPFETIQALDVVMRHLPSMR 176
>sp|Q4KLV6|AGO4_XENLA Protein argonaute-4 OS=Xenopus laevis GN=eif2c4 PE=2 SV=1
Length = 884
Score = 48.5 bits (114), Expect = 1e-05, Method: Composition-based stats.
Identities = 27/86 (31%), Positives = 42/86 (48%), Gaps = 4/86 (4%)
Query: 18 PAYDGRKGFYTAGALPFTSKDFNIKLIDRDESGDIKREREFKVSVKLASRADINHLRQFL 77
P YDG++ YTA LP ++++ E D + FKV+++ S + L + L
Sbjct: 105 PGYDGKRNMYTAHPLPIGRDRVDLEVTLPGEGKD----QTFKVTIQWVSVVSLQLLLEAL 160
Query: 78 QCKSREAPHDIIQVLDVVLRESPSKK 103
E P D +Q LDV+ R PS +
Sbjct: 161 SGHLSEVPDDSVQALDVITRHLPSMR 186
>sp|Q6DCX2|AGO2_XENLA Protein argonaute-2 OS=Xenopus laevis GN=eif2c2 PE=2 SV=1
Length = 862
Score = 48.1 bits (113), Expect = 2e-05, Method: Composition-based stats.
Identities = 35/107 (32%), Positives = 56/107 (52%), Gaps = 9/107 (8%)
Query: 2 KELLEKHGKTHFNGCL-----PAYDGRKGFYTAGALPFTSKDFNIKLIDRDESGDIKRER 56
+E++E H HF + P +DGRK YTA LP ++D ++L + G+ K +R
Sbjct: 74 REIVE-HMVQHFKAQIFGDRKPVFDGRKNLYTAMPLPI-ARDKQVEL-EVTLPGEGK-DR 129
Query: 57 EFKVSVKLASRADINHLRQFLQCKSREAPHDIIQVLDVVLRESPSKK 103
FKV++K + + L L + P + +Q LDVV+R PS +
Sbjct: 130 IFKVAIKWMACVSLQALHDALSGRLPNVPFETVQALDVVMRHLPSMR 176
>sp|Q0JF58|AGO4B_ORYSJ Protein argonaute 4B OS=Oryza sativa subsp. japonica GN=AGO4B PE=2
SV=1
Length = 911
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 51/107 (47%), Gaps = 22/107 (20%)
Query: 19 AYDGRKGFYTAGALPFTSKDFNIKLID--------------RDESGDIKRER-------- 56
AYDG K +T GALP + +F + L D D G R+R
Sbjct: 118 AYDGEKSLFTIGALPQVTNEFTVVLEDVSTGKTAANGSPGGNDSPGGSDRKRVRRPYQTK 177
Query: 57 EFKVSVKLASRADINHLRQFLQCKSREAPHDIIQVLDVVLRESPSKK 103
FKV + A++ +N + Q ++ + E + ++VLD++LR+ +K+
Sbjct: 178 TFKVELCFAAKIPMNAIAQAIKGQESENSQEALRVLDIILRQHSAKQ 224
>sp|Q9SHF3|AGO2_ARATH Protein argonaute 2 OS=Arabidopsis thaliana GN=AGO2 PE=1 SV=1
Length = 1014
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 49/90 (54%), Gaps = 6/90 (6%)
Query: 13 FNGCLPAYDGRKGFYTAGALPFTSKDFNIKLIDRDESGDIKREREFKVSVKLASRADINH 72
F + AYDG+K ++A LP S + ++ +E R R + ++K + +
Sbjct: 229 FPLAMTAYDGQKNIFSAVELPTGS--YKVEYPKTEEM----RGRSYTFTIKQVNVLKLGD 282
Query: 73 LRQFLQCKSREAPHDIIQVLDVVLRESPSK 102
L++++ +S P D++Q +DVV++E PSK
Sbjct: 283 LKEYMTGRSSFNPRDVLQGMDVVMKEHPSK 312
>sp|Q9SDG8|AGO4A_ORYSJ Protein argonaute 4A OS=Oryza sativa subsp. japonica GN=AGO4A PE=2
SV=1
Length = 904
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 52/106 (49%), Gaps = 21/106 (19%)
Query: 19 AYDGRKGFYTAGALPFTSKDFNIKLID--------------RDESG-DIKRER------E 57
AYDG K +T GALP + +F + L D D G D KR R
Sbjct: 112 AYDGEKSLFTIGALPQVNNEFTVVLEDFNTGKSSANGGSPGNDSPGNDRKRVRRPYQTKT 171
Query: 58 FKVSVKLASRADINHLRQFLQCKSREAPHDIIQVLDVVLRESPSKK 103
FKV + A++ ++ + Q L+ + E + I+V+D++LR+ +K+
Sbjct: 172 FKVELNFAAKIPMSAIAQALRGQESENTQEAIRVIDIILRQHSAKQ 217
>sp|Q9ZVD5|AGO4_ARATH Protein argonaute 4 OS=Arabidopsis thaliana GN=AGO4 PE=1 SV=2
Length = 924
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 52/107 (48%), Gaps = 22/107 (20%)
Query: 19 AYDGRKGFYTAGALPFTSKDFNIKL-------------IDRDES---GDIKRER------ 56
AYDG K +T GALP DF++ L + +ES GD KR R
Sbjct: 129 AYDGEKTLFTYGALPSNKMDFSVVLEEVSATRANGNGSPNGNESPSDGDRKRLRRPNRSK 188
Query: 57 EFKVSVKLASRADINHLRQFLQCKSREAPHDIIQVLDVVLRESPSKK 103
F+V + A++ + L ++ + E + I+VLD++LR+ +++
Sbjct: 189 NFRVEISYAAKIPLQALANAMRGQESENSQEAIRVLDIILRQHAARQ 235
>sp|Q8CJG1|AGO1_MOUSE Protein argonaute-1 OS=Mus musculus GN=Eif2c1 PE=1 SV=2
Length = 857
Score = 42.7 bits (99), Expect = 7e-04, Method: Composition-based stats.
Identities = 31/102 (30%), Positives = 46/102 (45%), Gaps = 5/102 (4%)
Query: 3 ELLEKHGKTH-FNGCLPAYDGRKGFYTAGALPFTSKDFNIKLIDRDESGDIKREREFKVS 61
E + +H K F P YDG+K YT ALP ++ + ++ E D R FKVS
Sbjct: 74 EYMVQHFKPQIFGDRKPVYDGKKNIYTVTALPIGNERVDFEVTIPGEGKD----RIFKVS 129
Query: 62 VKLASRADINHLRQFLQCKSREAPHDIIQVLDVVLRESPSKK 103
+K + L + L P + +Q LDV +R S +
Sbjct: 130 IKWLAIVSWRMLHEALVSGQIPVPLESVQALDVAMRHLASMR 171
>sp|Q9UL18|AGO1_HUMAN Protein argonaute-1 OS=Homo sapiens GN=EIF2C1 PE=1 SV=3
Length = 857
Score = 42.7 bits (99), Expect = 7e-04, Method: Composition-based stats.
Identities = 31/102 (30%), Positives = 46/102 (45%), Gaps = 5/102 (4%)
Query: 3 ELLEKHGKTH-FNGCLPAYDGRKGFYTAGALPFTSKDFNIKLIDRDESGDIKREREFKVS 61
E + +H K F P YDG+K YT ALP ++ + ++ E D R FKVS
Sbjct: 74 EYMVQHFKPQIFGDRKPVYDGKKNIYTVTALPIGNERVDFEVTIPGEGKD----RIFKVS 129
Query: 62 VKLASRADINHLRQFLQCKSREAPHDIIQVLDVVLRESPSKK 103
+K + L + L P + +Q LDV +R S +
Sbjct: 130 IKWLAIVSWRMLHEALVSGQIPVPLESVQALDVAMRHLASMR 171
>sp|Q9C793|AGO7_ARATH Protein argonaute 7 OS=Arabidopsis thaliana GN=AGO7 PE=2 SV=1
Length = 990
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 57/115 (49%), Gaps = 13/115 (11%)
Query: 1 MKELLEKHGKTHFNGCLPAYDGRKGFYTAGA-----------LPFTSKDFNIKLID-RDE 48
+K+ L + + F+G +PA+DGR+ Y+ LP S + D R++
Sbjct: 200 IKQKLVETDRNSFSGVVPAFDGRQNIYSPVEFQGDRLEFFVNLPIPSCKAVMNYGDLREK 259
Query: 49 SGDIKREREFKVSVKLASRADINHLRQFLQCKSREAPHDIIQVLDVVLRESPSKK 103
K E+ F+V++KL S+ D R+ + P + I LDV+LRE+P +K
Sbjct: 260 QPQKKIEKLFRVNMKLVSKFDGKEQRKEGE-DWAPLPPEYIHALDVILRENPMEK 313
>sp|Q8CJF8|AGO4_MOUSE Protein argonaute-4 OS=Mus musculus GN=Eif2c4 PE=2 SV=2
Length = 861
Score = 41.6 bits (96), Expect = 0.001, Method: Composition-based stats.
Identities = 29/86 (33%), Positives = 42/86 (48%), Gaps = 4/86 (4%)
Query: 18 PAYDGRKGFYTAGALPFTSKDFNIKLIDRDESGDIKREREFKVSVKLASRADINHLRQFL 77
P YDG++ YTA LP ++++ E D + FKVSV+ S + L + L
Sbjct: 82 PGYDGKRNMYTAHPLPIGRDRIDMEVTLPGEGKD----QTFKVSVQWVSVVSLQLLLEAL 137
Query: 78 QCKSREAPHDIIQVLDVVLRESPSKK 103
E P D +Q LDV+ R PS +
Sbjct: 138 AGHLNEVPDDSVQALDVITRHLPSMR 163
>sp|Q9HCK5|AGO4_HUMAN Protein argonaute-4 OS=Homo sapiens GN=EIF2C4 PE=1 SV=2
Length = 861
Score = 41.6 bits (96), Expect = 0.002, Method: Composition-based stats.
Identities = 29/86 (33%), Positives = 42/86 (48%), Gaps = 4/86 (4%)
Query: 18 PAYDGRKGFYTAGALPFTSKDFNIKLIDRDESGDIKREREFKVSVKLASRADINHLRQFL 77
P YDG++ YTA LP ++++ E D + FKVSV+ S + L + L
Sbjct: 82 PGYDGKRNMYTAHPLPIGRDRVDMEVTLPGEGKD----QTFKVSVQWVSVVSLQLLLEAL 137
Query: 78 QCKSREAPHDIIQVLDVVLRESPSKK 103
E P D +Q LDV+ R PS +
Sbjct: 138 AGHLNEVPDDSVQALDVITRHLPSMR 163
>sp|Q5NBN9|AGO15_ORYSJ Protein argonaute 15 OS=Oryza sativa subsp. japonica GN=AGO15 PE=2
SV=2
Length = 889
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 47/108 (43%), Gaps = 24/108 (22%)
Query: 19 AYDGRKGFYTAGALPFTSKDFNIKLIDRDESGDIKRER---------------------- 56
AY+G KG +TAGAL T F + + D SG R
Sbjct: 94 AYNGEKGLFTAGALLQTKHQFVVVMEDASSSGRTTTRRSSGGDDGSPGGSDRKRMKRPMA 153
Query: 57 --EFKVSVKLASRADINHLRQFLQCKSREAPHDIIQVLDVVLRESPSK 102
+F V + A++ ++ + + L+ + E + ++VLD+ LR+ +K
Sbjct: 154 VKKFMVEISFAAKDPMSAIAEVLRGQETENSMEALRVLDITLRQHSAK 201
>sp|Q7XTS3|AGO3_ORYSJ Protein argonaute 3 OS=Oryza sativa subsp. japonica GN=AGO3 PE=2
SV=2
Length = 1109
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 39/83 (46%), Gaps = 11/83 (13%)
Query: 19 AYDGRKGFYTAGALPFTSKDFNIKLIDRDESGDIKREREFKVSVKLASRADINHLRQFLQ 78
AYDG + YT LP K +D S R + VSVKL ++ L +
Sbjct: 283 AYDGERNLYTCAELPEDCIVPVSKFRVKDSS------RTYIVSVKLKKPLPLSQLLE--- 333
Query: 79 CKSREAPHDIIQVLDVVLRESPS 101
R P D++Q LDV++RE+ S
Sbjct: 334 --QRPGPRDVMQGLDVIVREASS 354
>sp|Q75HC2|AGO7_ORYSJ Protein argonaute 7 OS=Oryza sativa subsp. japonica GN=AGO7 PE=2
SV=2
Length = 1048
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 55/110 (50%), Gaps = 14/110 (12%)
Query: 2 KELLEKHGKTHFNGCLPAYDGRKGFYTAGALPFTSKDFNIKL--------IDRDESG--- 50
K+L+E++ +G PA+DGRK Y+ +F + L + ++++G
Sbjct: 246 KKLVEENPSV-LSGSQPAFDGRKNLYSPVRFQEDRVEFFVSLPVALARCSVVKEDTGHML 304
Query: 51 DIKREREFKVSVKLASRADINHLRQFLQ--CKSREAPHDIIQVLDVVLRE 98
D ++ + FKV+V+L S+ L ++L P D + LDVVLRE
Sbjct: 305 DKQKLKTFKVNVRLVSKLCGEDLNKYLNEDKDGIPLPQDYLHALDVVLRE 354
>sp|Q6YSJ5|AGO16_ORYSJ Protein argonaute 16 OS=Oryza sativa subsp. japonica GN=AGO16 PE=2
SV=2
Length = 883
Score = 38.5 bits (88), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 46/104 (44%), Gaps = 19/104 (18%)
Query: 19 AYDGRKGFYTAGALPFTSKDFNIKLIDRDE-------------SGDIKRER------EFK 59
AYDG K +T G LP + +F + L + GD KR + +
Sbjct: 94 AYDGEKCLFTVGPLPQNNFEFTVILEETSSRAAGGSLGHGSPNQGDKKRSKCTHLAKKIV 153
Query: 60 VSVKLASRADINHLRQFLQCKSREAPHDIIQVLDVVLRESPSKK 103
V + A++ + + LQ + D ++VLD+VLR+ +K+
Sbjct: 154 VGISYAAKIPLKSVALALQGSESDHAQDALRVLDIVLRQQQAKR 197
>sp|Q3E984|AGO8_ARATH Protein argonaute 8 OS=Arabidopsis thaliana GN=AGO8 PE=3 SV=1
Length = 850
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 51/103 (49%), Gaps = 13/103 (12%)
Query: 9 GKTHFNGCLPAYDGRKGFYTAGALPFTSKDFNIKLID----RDESGDIK---REREFKVS 61
G HF AYDG K YT G LP +S DF++ L R+ +K + ++F V+
Sbjct: 93 GCKHF-----AYDGDKNLYTVGPLPRSSLDFSVVLETAPSRRNADKRLKLPHQSKKFNVA 147
Query: 62 VKLA-SRADINHLRQFLQCKSREAPHDIIQVLDVVLRESPSKK 103
+ A + + LQ K + D I+V+D +L ++ +++
Sbjct: 148 ILFAPPEIPMEAIANALQGKKTKHLLDAIRVMDCILSQNAARQ 190
>sp|Q7XTS4|AGO2_ORYSJ Protein argonaute 2 OS=Oryza sativa subsp. japonica GN=AGO2 PE=2
SV=2
Length = 1034
Score = 36.2 bits (82), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 41/85 (48%), Gaps = 18/85 (21%)
Query: 19 AYDGRKGFYTAGALPFTSKDFNIKLIDRDESGDIKREREFKVSVKLASRADINHLRQFLQ 78
AYDG++ +T LP F +K+ R R + VSV+ + ++ L +
Sbjct: 271 AYDGKRNLFTCAELP--DGLFRVKV----------RSRTYIVSVEFKKKLPLSQLSEL-- 316
Query: 79 CKSREAPHDIIQVLDVVLRESPSKK 103
P +++Q LDV++RE+ S +
Sbjct: 317 ----PVPREVLQGLDVIVREASSWR 337
>sp|Q9VUQ5|AGO2_DROME Protein argonaute-2 OS=Drosophila melanogaster GN=AGO2 PE=1 SV=3
Length = 1214
Score = 35.8 bits (81), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 22/97 (22%), Positives = 44/97 (45%), Gaps = 7/97 (7%)
Query: 2 KELLEKHGKTHFNGCLPAYDGRKGFYTAGALPFTSKDFNIKLIDRDESGDIKREREFKVS 61
++ E+ G + AYDG+ Y+ LP S++ + + DR+ R + +
Sbjct: 449 RQAFEQFRVDQLGGAVLAYDGKASCYSVDKLPLNSQNPEVTVTDRN-----GRTLRYTIE 503
Query: 62 VKLA--SRADINHLRQFLQCKSREAPHDIIQVLDVVL 96
+K S D+ L ++ + + P +Q ++VVL
Sbjct: 504 IKETGDSTIDLKSLTTYMNDRIFDKPMRAMQCVEVVL 540
>sp|O48771|AGO6_ARATH Protein argonaute 6 OS=Arabidopsis thaliana GN=AGO6 PE=2 SV=2
Length = 878
Score = 30.0 bits (66), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 56/125 (44%), Gaps = 23/125 (18%)
Query: 2 KELLEKHGKTH---FNGCLPAYDGRKGFYTAGALPFTSKDFNI----KLIDRD------- 47
++L+++ KT+ +G AYDG K YT G LP DF + RD
Sbjct: 79 RKLMDQLFKTYSSDLDGKRLAYDGEKTLYTVGPLPQNEFDFLVIVEGSFSKRDCGVSDGG 138
Query: 48 -ESGDIKRE------REFKVSVKLASRADINHL--RQFLQCKSREAPHDIIQVLDVVLRE 98
SG KR R +KV + A+ + + Q ++ D ++VLD+VLR+
Sbjct: 139 SSSGTCKRSKRSFLPRSYKVQIHYAAEIPLKTVLGTQRGAYTPDKSAQDALRVLDIVLRQ 198
Query: 99 SPSKK 103
+++
Sbjct: 199 QAAER 203
>sp|A2RUV5|HFM1_XENTR Probable ATP-dependent DNA helicase HFM1 OS=Xenopus tropicalis
GN=hfm1 PE=2 SV=1
Length = 1336
Score = 29.6 bits (65), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Query: 36 SKDFNIKLIDRDESGDIKREREFKVSVKLASRADINH-LRQF-LQCKSREAPHD 87
S FN L+ + +S +I + +K S K AD N +RQ ++C +RE H+
Sbjct: 966 SDSFNADLVTQHKSENIFSQEIYKTSTKTKDIADTNWSMRQTAIKCATRECNHN 1019
>sp|Q8Y510|ADDB_LISMO ATP-dependent helicase/deoxyribonuclease subunit B OS=Listeria
monocytogenes serovar 1/2a (strain ATCC BAA-679 / EGD-e)
GN=addB PE=3 SV=1
Length = 1157
Score = 29.6 bits (65), Expect = 5.5, Method: Composition-based stats.
Identities = 13/40 (32%), Positives = 25/40 (62%)
Query: 50 GDIKREREFKVSVKLASRADINHLRQFLQCKSREAPHDII 89
+IK+ E + A+RA+ + +RQF++ K +EA + I+
Sbjct: 1059 AEIKQNGELSARSRTATRAEFDKMRQFVRHKYQEAGNKIL 1098
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.138 0.400
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 38,996,679
Number of Sequences: 539616
Number of extensions: 1410946
Number of successful extensions: 2917
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 18
Number of HSP's that attempted gapping in prelim test: 2831
Number of HSP's gapped (non-prelim): 63
length of query: 103
length of database: 191,569,459
effective HSP length: 72
effective length of query: 31
effective length of database: 152,717,107
effective search space: 4734230317
effective search space used: 4734230317
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)