Query 039538
Match_columns 311
No_of_seqs 35 out of 37
Neff 3.0
Searched_HMMs 29240
Date Mon Mar 25 18:27:34 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/039538.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/039538hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3cry_A Gamma-glutamyl cyclotra 99.2 1.1E-10 3.8E-15 99.5 10.2 143 84-274 14-162 (188)
2 2qik_A UPF0131 protein YKQA; N 99.0 6.6E-10 2.3E-14 100.5 10.2 139 84-276 125-271 (285)
3 2jqv_A AT3G28950, AIG2 protein 98.8 1.4E-08 5E-13 85.0 8.3 93 82-200 4-98 (165)
4 2g0q_A AT5G39720.1 protein; st 98.3 1.5E-06 5.1E-11 74.1 8.7 94 81-200 12-107 (173)
5 1v30_A Hypothetical UPF0131 pr 97.5 0.00019 6.5E-09 58.5 6.8 79 86-194 7-87 (124)
6 1xhs_A Hypothetical UPF0131 pr 96.5 0.0019 6.6E-08 52.1 4.0 88 88-211 2-92 (121)
7 3jud_A AIG2-like domain-contai 92.4 0.28 9.7E-06 41.2 6.6 90 88-198 3-98 (153)
8 1vkb_A Hypothetical protein; g 90.8 0.33 1.1E-05 40.9 5.4 43 145-197 64-109 (161)
9 2qik_A UPF0131 protein YKQA; N 61.8 16 0.00053 32.8 6.3 83 87-196 3-86 (285)
10 3kg0_A Snoab; polyketide, anth 18.9 2.9E+02 0.0098 21.8 6.4 73 147-224 16-88 (128)
No 1
>3cry_A Gamma-glutamyl cyclotransferase; enzyme, oxoproline; 1.70A {Homo sapiens} PDB: 2pn7_A 2rbh_A 2i5t_A* 2q53_A
Probab=99.17 E-value=1.1e-10 Score=99.46 Aligned_cols=143 Identities=16% Similarity=0.169 Sum_probs=102.7
Q ss_pred CCeEEEEeeccccChhcccccCCCccceeEEEEcCceeeccccchhhhhcCCCCCCcccccccceeecCCeeEEEEEEEE
Q 039538 84 DGLISISGFGSLLSENSARSTFPNLINFRVAKLHGFRRVFAHVAPIFFERGIAKPKTKEISSLSVEPCEGQTLIVTVFEI 163 (311)
Q Consensus 84 d~~IsI~GyGSLLse~SARsTFP~l~nFR~a~l~G~RRVF~h~a~iff~RGIa~~~T~e~AsLsvEp~~g~~~vvsvFEI 163 (311)
...+-||+|||||+.......-|+-....+|++.||+|.|... |+.-...-.-...+++|..|..+.|.|++|
T Consensus 14 ~~~~~~FaYGSlm~~~~~~~~~~~~~~~~~a~l~gy~l~f~~~-------~~~~~~~~~g~~~~lv~~~g~~V~G~ly~v 86 (188)
T 3cry_A 14 EESFLYFAYGSNLLTERIHLRNPSAAFFCVARLQDFKLDFGNS-------QGKTSQTWHGGIATIFQSPGDEVWGVVWKM 86 (188)
T ss_dssp CCEEEEEECSGGGSHHHHHHHCTTCEEEEEEEEEEEEEEEEEE-------TTCCCTTTSSCEEEEEEEEEEEEEEEEEEE
T ss_pred CCCEEEEEEccCCCHHHHHhhCCCCceEEEEEEcCEEEEECCC-------CCCCcCCCCCeeEeEEeCCCCEEEEEEEEE
Confidence 4679999999999998887777776677899999999999953 211000001134578888899999999999
Q ss_pred eccccchhhhhhcchhhhhhhcc----ceeeeeecccccCCCCCCCceeEEecCChHHHHHHHhcCChhhhhhhccccCc
Q 039538 164 KKIRGIKLEELCTMIPAFIKREH----EFRFLAVSPETLDGKPFTNRAVLCARSSDEEFFQIRCKGSKEIYFHHYGRYNI 239 (311)
Q Consensus 164 ~~~~Gl~~eel~~~lpafieRE~----eY~~~~V~~~~Ldg~p~~~~AvlCar~SDe~y~~~rC~~~~e~y~~~~gr~~i 239 (311)
+.+ ++..|++||- .|+.+.|.....||.+. .|+.-. . .+
T Consensus 87 ~~~----------~l~~LD~~Eg~~~g~Y~r~~v~V~~~~g~~~--~a~vYv--------~-----~~------------ 129 (188)
T 3cry_A 87 NKS----------NLNSLDEQQGVKSGMYVVIEVKVATQEGKEI--TCRSYL--------M-----TN------------ 129 (188)
T ss_dssp EGG----------GHHHHHHHTTGGGTSCEEEEEEEEETTCCEE--EEEEEE--------C-----SS------------
T ss_pred CHH----------HHHHHHHHhCCCCCcEEEEEEEEEeCCCCEE--EEEEEE--------e-----cC------------
Confidence 998 8999999995 79999887765566331 222211 1 01
Q ss_pred cccccCCccccHhHHHHHHHHHHHh--cHHHHHhhhh
Q 039538 240 DKIWRDDILPCRVYLRHCVLAAKNL--GDEAYNNFLD 274 (311)
Q Consensus 240 ~~IW~~dIlPcr~YLrhCvlAAk~l--G~ea~~~FLd 274 (311)
.....|..-||.+.+.||+.. .++..+.+..
T Consensus 130 ----~~~~~ps~~Yl~~i~~g~~~~gl~~~y~~~L~~ 162 (188)
T 3cry_A 130 ----YESAPPSPQYKKIICMGAKENGLPLEYQEKLKA 162 (188)
T ss_dssp ----EEECCCCHHHHHHHHHHHHHTTCCHHHHHHHHT
T ss_pred ----CCCCCChHHHHHHHHHHHHHhCcCHHHHHHHhc
Confidence 012679999999999999984 4665555553
No 2
>2qik_A UPF0131 protein YKQA; NESG, SR631, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; HET: CIT; 1.35A {Bacillus subtilis}
Probab=99.05 E-value=6.6e-10 Score=100.50 Aligned_cols=139 Identities=17% Similarity=0.128 Sum_probs=101.3
Q ss_pred CCeEEEEeeccccChhcccc-cCCCc--cceeEEEEcCceeeccccchhhhhcCCCCCCcccccccceeecCCeeEEEEE
Q 039538 84 DGLISISGFGSLLSENSARS-TFPNL--INFRVAKLHGFRRVFAHVAPIFFERGIAKPKTKEISSLSVEPCEGQTLIVTV 160 (311)
Q Consensus 84 d~~IsI~GyGSLLse~SARs-TFP~l--~nFR~a~l~G~RRVF~h~a~iff~RGIa~~~T~e~AsLsvEp~~g~~~vvsv 160 (311)
.+.+-||||||||+...... ..|.- .-..+|++.||+|.|+ . ..+.+| ..+++|. |..+.|.+
T Consensus 125 ~~~~~yFaYGSnm~~~~~~~~~~p~~~~~~~~~a~L~G~~l~F~-~--~~~~~g----------~a~iv~~-g~~v~Gvl 190 (285)
T 2qik_A 125 KNPIYYFAYGSCMDNARFQKAGVDHYFQDPVGRAVLKGYTTRFT-L--KREDGS----------RADMLED-GGTTEGVL 190 (285)
T ss_dssp CSSEEEEECSGGGSSHHHHHHTCGGGSSCEEEEEEEETCEEEEE-E--EETTEE----------EEEEECS-SCEEEEEE
T ss_pred CCcEEEEEechhcCHhhcccccCCcccceEeEEEEEeCeEEEcC-c--CCCCCe----------eeeEEEC-CCEEEEEE
Confidence 45799999999999998776 45654 3446999999999999 2 223444 3578888 99999999
Q ss_pred EEEeccccchhhhhhcchhhhhhhcc----ceeeeeecccccCCCCCCCceeEEecCChHHHHHHHhcCChhhhhhhccc
Q 039538 161 FEIKKIRGIKLEELCTMIPAFIKREH----EFRFLAVSPETLDGKPFTNRAVLCARSSDEEFFQIRCKGSKEIYFHHYGR 236 (311)
Q Consensus 161 FEI~~~~Gl~~eel~~~lpafieRE~----eY~~~~V~~~~Ldg~p~~~~AvlCar~SDe~y~~~rC~~~~e~y~~~~gr 236 (311)
++|+.+ ++..|++||- .|+.+.|.....||.++ +|+.-. . . .+
T Consensus 191 y~i~~~----------~l~~LD~~Eg~~~g~Y~r~~v~v~~~~g~~~--~a~~Yv--------~---~-~~--------- 237 (285)
T 2qik_A 191 YRIPYS----------ALSYLYKREGVESLTYRPAFVDVEAGGRHYK--DCLTFL--------V---L-QK--------- 237 (285)
T ss_dssp EEECGG----------GHHHHHHHTTTTTTSEEEEEEEEEETTEEEE--EEEEEE--------E---S-SC---------
T ss_pred EEECHH----------HHHHHHHhhCCCCCceEEEEEEEEECCCCEE--EEEEEE--------e---c-CC---------
Confidence 999998 9999999994 49998887765554321 222221 1 0 00
Q ss_pred cCccccccCCccccHhHHHHHHHHHH-HhcHHHHHhhhhcc
Q 039538 237 YNIDKIWRDDILPCRVYLRHCVLAAK-NLGDEAYNNFLDHT 276 (311)
Q Consensus 237 ~~i~~IW~~dIlPcr~YLrhCvlAAk-~lG~ea~~~FLdtT 276 (311)
.....|..-||.+.+.||. .+.++..+++..++
T Consensus 238 -------~~~~~Ps~~Yl~~i~~g~~~g~~~~Y~~~l~~~~ 271 (285)
T 2qik_A 238 -------EAEIAPPQHYQIEIERGAELYLSPEFTEKLKRHM 271 (285)
T ss_dssp -------CCCCCCCHHHHHHHHHHHHHHSCHHHHHHHHHHH
T ss_pred -------CCCCCCHHHHHHHHHHHHhcCCCHHHHHHHHHHH
Confidence 1358899999999999998 55666666665544
No 3
>2jqv_A AT3G28950, AIG2 protein-like; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Arabidopsis thaliana}
Probab=98.79 E-value=1.4e-08 Score=84.97 Aligned_cols=93 Identities=17% Similarity=0.232 Sum_probs=76.2
Q ss_pred CCCCeEEEEeeccccChhcccccCCCccceeEEEEcCceeeccccchhhhhcCCCCCCcccccccceeecCCeeEEEEEE
Q 039538 82 SPDGLISISGFGSLLSENSARSTFPNLINFRVAKLHGFRRVFAHVAPIFFERGIAKPKTKEISSLSVEPCEGQTLIVTVF 161 (311)
Q Consensus 82 ~~d~~IsI~GyGSLLse~SARsTFP~l~nFR~a~l~G~RRVF~h~a~iff~RGIa~~~T~e~AsLsvEp~~g~~~vvsvF 161 (311)
|++..+-||+||||++........++....++|.+.||+|.|. +|-. -..+.|.+|..+.|.|+
T Consensus 4 s~~~~~~vFvYGSL~~~~~~~~~~~~~~~~~~a~l~Gy~~~~~--------~~~~--------yP~lv~~~~~~V~G~v~ 67 (165)
T 2jqv_A 4 SDPQSHNVFVYGSILEPAVAAVILDRTADTVPAVLHGYHRYKL--------KGLP--------YPCIVSSDSGKVNGKVI 67 (165)
T ss_dssp CCSSCEEEEESSTTSSHHHHHHHTSSCCEEEEEEEETCEECCC--------TTSS--------SCCEESCCSSEEEEEEE
T ss_pred CCCCceEEEEEcCCCCchhhHHHhCCCCccceEEEeCeEEEec--------CCCC--------CCEEEECCCCEEEEEEE
Confidence 4556789999999999999888778888899999999999985 1111 23567778889999999
Q ss_pred E-Eeccccchhhhhhcchhhhhhhc-cceeeeeecccccCC
Q 039538 162 E-IKKIRGIKLEELCTMIPAFIKRE-HEFRFLAVSPETLDG 200 (311)
Q Consensus 162 E-I~~~~Gl~~eel~~~lpafieRE-~eY~~~~V~~~~Ldg 200 (311)
+ |+.+ +|..|+++| .+|+++.|.....||
T Consensus 68 ~~v~~~----------~l~~LD~~E~~~Y~R~~v~v~~~dg 98 (165)
T 2jqv_A 68 TGVSDA----------ELNNFDVIEGNDYERVTVEVVRMDN 98 (165)
T ss_dssp EEECHH----------HHHHHHHTTTTSEEEEEEEEEETTT
T ss_pred EeCCHH----------HHHHHHHhccCCcEEEEEEEEECCC
Confidence 6 8877 899999999 799999888765565
No 4
>2g0q_A AT5G39720.1 protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, unknown function; NMR {Arabidopsis thaliana}
Probab=98.34 E-value=1.5e-06 Score=74.14 Aligned_cols=94 Identities=18% Similarity=0.216 Sum_probs=70.0
Q ss_pred cCCCCeEEEEeeccccChhcccccCCCccceeEEEEcCceeeccccchhhhhcCCCCCCcccccccceeecCCeeEEEEE
Q 039538 81 TSPDGLISISGFGSLLSENSARSTFPNLINFRVAKLHGFRRVFAHVAPIFFERGIAKPKTKEISSLSVEPCEGQTLIVTV 160 (311)
Q Consensus 81 ~~~d~~IsI~GyGSLLse~SARsTFP~l~nFR~a~l~G~RRVF~h~a~iff~RGIa~~~T~e~AsLsvEp~~g~~~vvsv 160 (311)
.+++....||+||||++......-.......++|++.||+|.+- +|-..| .+.|.+|..+.|.|
T Consensus 12 ~~~~~~~~vFvYGSL~~~~~~~~~l~~~~~~~~A~l~Gy~l~~~--------~~~~yP--------~lv~~~g~~V~G~v 75 (173)
T 2g0q_A 12 SDSLQLHNVFVYGSFQDPDVINVMLDRTPEIVSATLPGFQRFRL--------KGRLYP--------CIVPSEKGEVHGKV 75 (173)
T ss_dssp SCCSSSEEEEECSGGGCHHHHHHHTSSCCEEEEEEEETCEECCC--------CSSSCC--------CEECCTTCEEEEEE
T ss_pred CCCCCCEEEEEEcCCCCCccCHHHhcCCCceeEEEEcCeEEEee--------CCCeee--------EEEECCCCEEEEEE
Confidence 34566789999999999996444333445569999999997543 222222 56778888899988
Q ss_pred E-EEeccccchhhhhhcchhhhhhhc-cceeeeeecccccCC
Q 039538 161 F-EIKKIRGIKLEELCTMIPAFIKRE-HEFRFLAVSPETLDG 200 (311)
Q Consensus 161 F-EI~~~~Gl~~eel~~~lpafieRE-~eY~~~~V~~~~Ldg 200 (311)
+ +|+.+ +|..|+++| .+|+++.|.....||
T Consensus 76 ~~~v~~~----------~l~~LD~~Eg~~Y~R~~v~V~~~dg 107 (173)
T 2g0q_A 76 LMGVTSD----------ELENLDAVEGNEYERVTVGIVREDN 107 (173)
T ss_dssp EEEECHH----------HHHHHHHHHTTTEEEEEEEEEESSS
T ss_pred EEEcCHH----------HHHHHHHHhhcCCEEEEEEEEECCC
Confidence 6 58877 899999999 699999887665554
No 5
>1v30_A Hypothetical UPF0131 protein PH0828; alpha+beta, structural genomics, unknown function; HET: NHE; 1.40A {Pyrococcus horikoshii} SCOP: d.269.1.1
Probab=97.51 E-value=0.00019 Score=58.47 Aligned_cols=79 Identities=20% Similarity=0.292 Sum_probs=61.1
Q ss_pred eEEEEeeccccChhcccccCCCccceeEEEEcCceeeccccchhhhhcCCCCCCcccccccceeecCCeeEEEEEEEEec
Q 039538 86 LISISGFGSLLSENSARSTFPNLINFRVAKLHGFRRVFAHVAPIFFERGIAKPKTKEISSLSVEPCEGQTLIVTVFEIKK 165 (311)
Q Consensus 86 ~IsI~GyGSLLse~SARsTFP~l~nFR~a~l~G~RRVF~h~a~iff~RGIa~~~T~e~AsLsvEp~~g~~~vvsvFEI~~ 165 (311)
.+.||.||||++...-..-.++-.-...|++.||+..+. ..| .+.|.+|. +.|.|+||+.
T Consensus 7 ~~~vFVYGTL~~g~~n~~~l~~a~~~g~a~l~gy~L~~g-----------~yP--------~lv~~~g~-V~Gev~~v~~ 66 (124)
T 1v30_A 7 SVRIAVYGTLRKGKPLHWYLKGAKFLGEDWIEGYQLYFE-----------YLP--------YAVKGKGK-LKVEVYEVDK 66 (124)
T ss_dssp CEEEEECSTTSTTSTTGGGGTTSEEEEEEEEEEEEEEES-----------SSE--------EEEEEEEE-EEEEEEEECH
T ss_pred ccEEEEECCCCCchHhHHhcCCCcEEEEEEEeeEEEEEC-----------CCC--------EEEecCCE-EEEEEEEECH
Confidence 467999999999988877666644456788889988722 122 23355666 9999999988
Q ss_pred cccchhhhhhcchhhhhhhc--cceeeeeec
Q 039538 166 IRGIKLEELCTMIPAFIKRE--HEFRFLAVS 194 (311)
Q Consensus 166 ~~Gl~~eel~~~lpafieRE--~eY~~~~V~ 194 (311)
+ +|.+|++-| .+|+++.|.
T Consensus 67 ~----------~l~~LD~~E~~~~Y~R~~V~ 87 (124)
T 1v30_A 67 E----------TFERINEIEIGTGYRLVEVS 87 (124)
T ss_dssp H----------HHHHHTTCGGGGGEEEEEEC
T ss_pred H----------HHHHhhhccCCCCeEEEEEE
Confidence 8 899999999 789999875
No 6
>1xhs_A Hypothetical UPF0131 protein YTFP; structure, autostructure, northeast structural genomics consortium, NESG, protein structure initiative, PSI; NMR {Escherichia coli} SCOP: d.269.1.1
Probab=96.52 E-value=0.0019 Score=52.12 Aligned_cols=88 Identities=17% Similarity=0.194 Sum_probs=62.3
Q ss_pred EEEeeccccChhcccccCCCccceeEEEEcCceeeccccchhhhhcCCCCCCcccccccceeecCCeeEEEEEEEEeccc
Q 039538 88 SISGFGSLLSENSARSTFPNLINFRVAKLHGFRRVFAHVAPIFFERGIAKPKTKEISSLSVEPCEGQTLIVTVFEIKKIR 167 (311)
Q Consensus 88 sI~GyGSLLse~SARsTFP~l~nFR~a~l~G~RRVF~h~a~iff~RGIa~~~T~e~AsLsvEp~~g~~~vvsvFEI~~~~ 167 (311)
.||-||||++...-..-.++-.-..++.+.||+..+. | ..| .+.|.+| .+.|.|++|+.+
T Consensus 2 ~vFvYGTL~~g~~~~~~l~~a~~~g~a~l~gy~L~~~---------g-~yP--------~lv~~~g-~V~Gevy~v~~~- 61 (121)
T 1xhs_A 2 RIFVYGSLRHKQGNSHWMTNAQLLGDFSIDNYQLYSL---------G-HYP--------GAVPGNG-TVHGEVYRIDNA- 61 (121)
T ss_dssp EEEECSCTTCCCTTTHHHHTCEEEEEEEEEEEEEEEC---------S-SSE--------EEEEEEE-EEEEEEEECCHH-
T ss_pred EEEEECCCCCcccchhhcCCCcEEEEEEEeCcEEEEe---------c-CCC--------eEEecCC-EEEEEEEEeCHH-
Confidence 5899999999776655444433445699999998854 1 122 1235566 789999999877
Q ss_pred cchhhhhhcchhhhhhhc---cceeeeeecccccCCCCCCCceeEEe
Q 039538 168 GIKLEELCTMIPAFIKRE---HEFRFLAVSPETLDGKPFTNRAVLCA 211 (311)
Q Consensus 168 Gl~~eel~~~lpafieRE---~eY~~~~V~~~~Ldg~p~~~~AvlCa 211 (311)
+|.+|++=| .+|+++.|.. .+| .|++..
T Consensus 62 ---------~l~~LD~~Eg~~~~Y~R~~v~~--~~g-----~a~vY~ 92 (121)
T 1xhs_A 62 ---------TLAELDALRTRGGEYARQLIQT--PYG-----SAWMYV 92 (121)
T ss_dssp ---------HHHHHHHHHSTTSCEEEEEEEE--TTE-----EEEEEE
T ss_pred ---------HHHHHHHhcCCCCCEEEEEEEc--CCC-----EEEEEE
Confidence 888888888 6899998873 222 677766
No 7
>3jud_A AIG2-like domain-containing protein 1; cyclotransferase, gamma-glutamylamine cyclotransferase, gamma-glutamyl-epsilon-lysine; 0.98A {Homo sapiens} SCOP: d.269.1.1 PDB: 3jub_A 3juc_A
Probab=92.43 E-value=0.28 Score=41.17 Aligned_cols=90 Identities=16% Similarity=0.142 Sum_probs=57.4
Q ss_pred EEEeeccccChhcccccCCCcccee--EEEEcCceeecc-ccchhhhhcCCCCCCcccccccceeecCCeeEEEEEEEEe
Q 039538 88 SISGFGSLLSENSARSTFPNLINFR--VAKLHGFRRVFA-HVAPIFFERGIAKPKTKEISSLSVEPCEGQTLIVTVFEIK 164 (311)
Q Consensus 88 sI~GyGSLLse~SARsTFP~l~nFR--~a~l~G~RRVF~-h~a~iff~RGIa~~~T~e~AsLsvEp~~g~~~vvsvFEI~ 164 (311)
.||-||+|..-.+--.- +.+.| .|++.|--+.-. +.+-+ .|- .....|-.+|.+|..+.|.|++|+
T Consensus 3 ~vFVYGTL~~G~~Nh~~---l~~~~~~~A~~~G~~~t~~~Ypl~~---~g~-----~~~P~l~~~p~~g~~V~G~ly~v~ 71 (153)
T 3jud_A 3 LVFVYGTLKRGQPNHRV---LRDGAHGSAAFRARGRTLEPYPLVI---AGE-----HNIPWLLHLPGSGRLVEGEVYAVD 71 (153)
T ss_dssp EEEECSTTSTTSTTGGG---GTCGGGCCEEEEEEEEESSCBCEEE---ETT-----TTEEEEBSCTTSSBCCEEEEEEEC
T ss_pred EEEEeCCCCCCCcChHH---HhcCcCCCeEEEEEEEeCCCccEEE---ecC-----CCCceEEecCCCCCEEEEEEEEEC
Confidence 58999998765432221 33221 355555544432 22211 120 012356667888889999999999
Q ss_pred ccccchhhhhhcchhhhhhhc---cceeeeeeccccc
Q 039538 165 KIRGIKLEELCTMIPAFIKRE---HEFRFLAVSPETL 198 (311)
Q Consensus 165 ~~~Gl~~eel~~~lpafieRE---~eY~~~~V~~~~L 198 (311)
.+ +|..|++.| .+|+++.|....+
T Consensus 72 ~~----------~l~~LD~~Eg~~~~Y~R~~v~V~~~ 98 (153)
T 3jud_A 72 ER----------MLRFLDDFQSCPALYQRTVLRVQLL 98 (153)
T ss_dssp HH----------HHHHHHHHTTTTTSCEEEEEEEEEE
T ss_pred HH----------HHHHHHHhcCCCCceEEEEEEEEee
Confidence 87 899999999 5899988877554
No 8
>1vkb_A Hypothetical protein; gamma-glutamyl cyclotransferase-like fold, structural genomi center for structural genomics, JCSG, protein structure INI PSI; 1.90A {Mus musculus} SCOP: d.269.1.1 PDB: 2kl2_A
Probab=90.83 E-value=0.33 Score=40.90 Aligned_cols=43 Identities=16% Similarity=0.223 Sum_probs=36.3
Q ss_pred ccceeecCCeeEEEEEEEEeccccchhhhhhcchhhhhhhc---cceeeeeecccc
Q 039538 145 SLSVEPCEGQTLIVTVFEIKKIRGIKLEELCTMIPAFIKRE---HEFRFLAVSPET 197 (311)
Q Consensus 145 sLsvEp~~g~~~vvsvFEI~~~~Gl~~eel~~~lpafieRE---~eY~~~~V~~~~ 197 (311)
-+.++|.+|..+.|.|++|+.+ +|.+|++-| ..|+++.|....
T Consensus 64 ~~~i~p~~g~~V~Gevy~v~~~----------~L~~LD~~Eg~p~~Y~R~~v~V~~ 109 (161)
T 1vkb_A 64 WLLYLPGKGHCVTGEIYEVDEQ----------MLRFLDDFEDCPSMYQRTALQVQV 109 (161)
T ss_dssp EEESCTTSSBCCEEEEEEECHH----------HHHHHHHHTTTTTSCEEEEEEEEE
T ss_pred eeEeecCCCCEEEEEEEEECHH----------HHHHHHHhcCCCCceEEEEEEEEe
Confidence 4778889999999999999988 888888888 589998877644
No 9
>2qik_A UPF0131 protein YKQA; NESG, SR631, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; HET: CIT; 1.35A {Bacillus subtilis}
Probab=61.77 E-value=16 Score=32.80 Aligned_cols=83 Identities=14% Similarity=0.165 Sum_probs=46.5
Q ss_pred EEEEeeccccChhcccccCCCccc-eeEEEEcCceeeccccchhhhhcCCCCCCcccccccceeecCCeeEEEEEEEEec
Q 039538 87 ISISGFGSLLSENSARSTFPNLIN-FRVAKLHGFRRVFAHVAPIFFERGIAKPKTKEISSLSVEPCEGQTLIVTVFEIKK 165 (311)
Q Consensus 87 IsI~GyGSLLse~SARsTFP~l~n-FR~a~l~G~RRVF~h~a~iff~RGIa~~~T~e~AsLsvEp~~g~~~vvsvFEI~~ 165 (311)
..||-||+|+....-..-..+-.- -+.+.+.| |.+. .| ..| .|-..|..+..+.|.|++|+.
T Consensus 3 ~~vFVYGTL~~g~~n~~~l~~~~~~~~~~~~~g--~L~~--------~g-~~P------~lv~~~~~~~~V~Gev~~v~~ 65 (285)
T 2qik_A 3 SLLFVYGTLRKHEKNHHLLAQSACINEQARTKG--SLFA--------AK-EGP------TVVFNDEDEGYIYGEVYEADE 65 (285)
T ss_dssp EEEEECSTTSTTSTTGGGGTTCEEEEEEEEEES--EEEE--------C---CE------EEECCTTCCSEEEEEEEEECH
T ss_pred cEEEEECCCCCCCcChHHhCCCeEeeeeEEEEE--EEEE--------cC-CCC------eEEEccCCCCEEEEEEEEcCH
Confidence 468999999988765443222110 13455654 4442 12 112 222334467889999999975
Q ss_pred cccchhhhhhcchhhhhhhccceeeeeeccc
Q 039538 166 IRGIKLEELCTMIPAFIKREHEFRFLAVSPE 196 (311)
Q Consensus 166 ~~Gl~~eel~~~lpafieRE~eY~~~~V~~~ 196 (311)
. .|++|-.-..+|+++.|...
T Consensus 66 ~----------~LD~~E~~~~~Y~R~~v~v~ 86 (285)
T 2qik_A 66 L----------CIHKLDQFFQGYHKQTVFVE 86 (285)
T ss_dssp H----------HHHHHHHHSTTCEEEEEEEE
T ss_pred H----------HhHHhcCCCCceeEEEEEEE
Confidence 4 34444333367888775543
No 10
>3kg0_A Snoab; polyketide, anthracycline, oxygenase, cofactor-independent, oxidoreductase; 1.70A {Streptomyces nogalater} PDB: 3kg1_A 3kng_A
Probab=18.91 E-value=2.9e+02 Score=21.83 Aligned_cols=73 Identities=19% Similarity=0.174 Sum_probs=49.3
Q ss_pred ceeecCCeeEEEEEEEEeccccchhhhhhcchhhhhhhccceeeeeecccccCCCCCCCceeEEecCChHHHHHHHhc
Q 039538 147 SVEPCEGQTLIVTVFEIKKIRGIKLEELCTMIPAFIKREHEFRFLAVSPETLDGKPFTNRAVLCARSSDEEFFQIRCK 224 (311)
Q Consensus 147 svEp~~g~~~vvsvFEI~~~~Gl~~eel~~~lpafieRE~eY~~~~V~~~~Ldg~p~~~~AvlCar~SDe~y~~~rC~ 224 (311)
++.+..+-.+++..|+|+.+ --.+++...++-+++..|-||--..+.-+. ++ ...-++..+|.|++-++-...
T Consensus 16 ~~~~~~~mi~via~~~V~pg-~~~f~~~~~~~~~~~~~~pGfi~~~L~r~~-~~---p~~yv~~~~W~s~ea~~a~~~ 88 (128)
T 3kg0_A 16 NDGVDADEVTFVNRFTVHGA-PAEFESVFARTAAFFARQPGFVRHTLLRER-DK---DNSYVNIAVWTDHDAFRRALA 88 (128)
T ss_dssp -----CCCEEEEEEEEECSC-HHHHHHHHHHHHHHHHTSTTEEEEEEEECT-TC---SSEEEEEEEESSHHHHHHHHH
T ss_pred eecCCCCcEEEEEEEEeCCC-HHHHHHHHHHHHHHHhcCCCccEEEEEEcC-CC---CCEEEEEEEECCHHHHHHHHc
Confidence 44555667788899999987 666777777777788899999877766543 32 234477779988877765555
Done!