AmiGO: BLAST Results


BLAST match view associations BLAST with UBP17 UBP17 UBP17 AT5G65450	protein from Arabidopsis thaliana	4.5e-98
BLAST match view associations BLAST with UBP16 UBP16 UBP16 AT4G24560	protein from Arabidopsis thaliana	1.8e-87
BLAST match view associations BLAST with UBP19 UBP19 UBP19 AT2G24640	protein from Arabidopsis thaliana	3.5e-75
BLAST match view associations BLAST with UBP18 UBP18 UBP18 AT4G31670	protein from Arabidopsis thaliana	1.2e-74
BLAST match view associations BLAST with DDB_G0274827 DDB_G0274827 DDB_G0274827 putative ubiquitin carboxyl-terminal hydrolase (UCH)	gene from Dictyostelium discoideum	5.3e-51
BLAST match view associations BLAST with usp42 usp42 usp42 ubiquitin specific peptidase 42	gene_product from Danio rerio	8.7e-50
BLAST match view associations BLAST with Usp42 Usp42 Usp42 ubiquitin specific peptidase 42	protein from Mus musculus	2.8e-49
BLAST match view associations BLAST with usp36 usp36 usp36 ubiquitin specific peptidase 36	gene_product from Danio rerio	8.0e-49
BLAST match view associations BLAST with Usp36 Usp36 Usp36 ubiquitin specific peptidase 36	protein from Mus musculus	1.4e-48
BLAST match view associations BLAST with USP42 USP42 USP42 Ubiquitin carboxyl-terminal hydrolase	protein from Gallus gallus	2.9e-48
BLAST match view associations BLAST with USP42 USP42 USP42 Ubiquitin carboxyl-terminal hydrolase 42	protein from Homo sapiens	3.7e-48
BLAST match view associations BLAST with Usp36 Usp36 Usp36 ubiquitin specific peptidase 36	gene from Rattus norvegicus	4.9e-48
BLAST match view associations BLAST with USP42 USP42 USP42 Ubiquitin carboxyl-terminal hydrolase	protein from Canis lupus familiaris	7.8e-48
BLAST match view associations BLAST with USP42 USP42 USP42 Ubiquitin carboxyl-terminal hydrolase 42	protein from Bos taurus	7.8e-48
BLAST match view associations BLAST with USP36 USP36 USP36 Ubiquitin carboxyl-terminal hydrolase	protein from Canis lupus familiaris	2.3e-47
BLAST match view associations BLAST with USP42 USP42 USP42 Ubiquitin carboxyl-terminal hydrolase 42	protein from Homo sapiens	4.0e-47
BLAST match view associations BLAST with USP36 USP36 USP36 Ubiquitin carboxyl-terminal hydrolase	protein from Bos taurus	4.6e-47
BLAST match view associations BLAST with USP36 USP36 USP36 Ubiquitin carboxyl-terminal hydrolase 36	protein from Homo sapiens	4.8e-47
BLAST match view associations BLAST with USP42 USP42 USP42 Ubiquitin carboxyl-terminal hydrolase 42	protein from Homo sapiens	7.1e-47
BLAST match view associations BLAST with USP36 USP36 USP36 Ubiquitin carboxyl-terminal hydrolase	protein from Sus scrofa	7.9e-47
BLAST match view associations BLAST with Usp42 Usp42 Usp42 ubiquitin specific peptidase 42	gene from Rattus norvegicus	1.2e-46
BLAST match view associations BLAST with USP17L12 USP17L12 USP17L12 Ubiquitin carboxyl-terminal hydrolase 17-like protein 12	protein from Homo sapiens	3.5e-43
BLAST match view associations BLAST with USP17L21 USP17L21 USP17L21 Ubiquitin carboxyl-terminal hydrolase 17-like protein 21	protein from Homo sapiens	3.5e-43
BLAST match view associations BLAST with USP17L11 USP17L11 USP17L11 Ubiquitin carboxyl-terminal hydrolase 17-like protein 11	protein from Homo sapiens	4.5e-43
BLAST match view associations BLAST with USP17L19 USP17L19 USP17L19 Ubiquitin carboxyl-terminal hydrolase 17-like protein 19	protein from Homo sapiens	4.5e-43
BLAST match view associations BLAST with USP17L10 USP17L10 USP17L10 Ubiquitin carboxyl-terminal hydrolase 17-like protein 10	protein from Homo sapiens	9.3e-43
BLAST match view associations BLAST with USP17L13 USP17L13 USP17L13 Ubiquitin carboxyl-terminal hydrolase 17-like protein 13	protein from Homo sapiens	1.2e-42
BLAST match view associations BLAST with USP17L18 USP17L18 USP17L18 Ubiquitin carboxyl-terminal hydrolase 17-like protein 18	protein from Homo sapiens	1.2e-42
BLAST match view associations BLAST with USP17L17 USP17L17 USP17L17 Ubiquitin carboxyl-terminal hydrolase 17-like protein 17	protein from Homo sapiens	1.2e-42
BLAST match view associations BLAST with USP17L13 USP17L13 USP17L13 Ubiquitin carboxyl-terminal hydrolase	protein from Homo sapiens	1.2e-42
BLAST match view associations BLAST with USP17L5 USP17L5 USP17L5 Ubiquitin carboxyl-terminal hydrolase 17-like protein 5	protein from Homo sapiens	1.9e-42
BLAST match view associations BLAST with USP17L15 USP17L15 USP17L15 Ubiquitin carboxyl-terminal hydrolase 17-like protein 15	protein from Homo sapiens	1.9e-42
BLAST match view associations BLAST with USP17L22 USP17L22 USP17L22 Ubiquitin carboxyl-terminal hydrolase 17-like protein 22	protein from Homo sapiens	1.9e-42
BLAST match view associations BLAST with USP17L20 USP17L20 USP17L20 Ubiquitin carboxyl-terminal hydrolase 17-like protein 20	protein from Homo sapiens	1.9e-42
BLAST match view associations BLAST with USP17L24 USP17L24 USP17L24 Ubiquitin carboxyl-terminal hydrolase 17-like protein 24	protein from Homo sapiens	1.9e-42
BLAST match view associations BLAST with USP17L2 USP17L2 USP17L2 Ubiquitin carboxyl-terminal hydrolase 17	protein from Homo sapiens	2.5e-42
BLAST match view associations BLAST with USP17L6 USP17L6 USP17L6 Ubiquitin carboxyl-terminal hydrolase 17-like protein 6	protein from Homo sapiens	3.6e-41
BLAST match view associations BLAST with LOC609437 LOC609437 LOC609437 Ubiquitin carboxyl-terminal hydrolase	protein from Canis lupus familiaris	9.6e-41
BLAST match view associations BLAST with USP17L3 USP17L3 USP17L3 Ubiquitin carboxyl-terminal hydrolase 17-like protein 3	protein from Homo sapiens	1.2e-40
BLAST match view associations BLAST with USP17L4 USP17L4 USP17L4 Inactive ubiquitin carboxyl-terminal hydrolase 17-like protein 4	protein from Homo sapiens	1.6e-40
BLAST match view associations BLAST with USP17L8 USP17L8 USP17L8 Inactive ubiquitin carboxyl-terminal hydrolase 17-like protein 8	protein from Homo sapiens	2.0e-40
BLAST match view associations BLAST with UBP25 UBP25 UBP25 AT3G14400	protein from Arabidopsis thaliana	3.6e-40
BLAST match view associations BLAST with USP17L1P USP17L1P USP17L1P Putative ubiquitin carboxyl-terminal hydrolase 17-like protein 1	protein from Homo sapiens	5.3e-40
BLAST match view associations BLAST with Usp17la Usp17la Usp17la ubiquitin specific peptidase 17-like A	protein from Mus musculus	6.8e-40
BLAST match view associations BLAST with LOC609268 LOC609268 LOC609268 Ubiquitin carboxyl-terminal hydrolase	protein from Canis lupus familiaris	1.4e-39
BLAST match view associations BLAST with USP17L7 USP17L7 USP17L7 Inactive ubiquitin carboxyl-terminal hydrolase 17-like protein 7	protein from Homo sapiens	1.8e-39
BLAST match view associations BLAST with Usp17l5 Usp17l5 Usp17l5 ubiquitin specific peptidase 17-like 5	gene from Rattus norvegicus	4.8e-39
BLAST match view associations BLAST with RGD1565607 RGD1565607 RGD1565607 similar to mouse deubiquitinating enzyme 6	gene from Rattus norvegicus	4.8e-39
BLAST match view associations BLAST with LOC609310 LOC609310 LOC609310 Ubiquitin carboxyl-terminal hydrolase	protein from Canis lupus familiaris	1.3e-38
BLAST match view associations BLAST with LOC689730 LOC689730 LOC689730 similar to ubiquitin specific peptidase 17 (homolog)	gene from Rattus norvegicus	2.1e-38
BLAST match view associations BLAST with UBP23 UBP23 UBP23 AT5G57990	protein from Arabidopsis thaliana	5.4e-38
BLAST match view associations BLAST with USP36 USP36 USP36 Ubiquitin carboxyl-terminal hydrolase 36	protein from Homo sapiens	2.4e-37
BLAST match view associations BLAST with LOC100686685 LOC100686685 LOC100686685 Uncharacterized protein	protein from Canis lupus familiaris	9.2e-36
BLAST match view associations BLAST with E2R279 E2R279 E2R279 Ubiquitin carboxyl-terminal hydrolase	protein from Canis lupus familiaris	1.9e-35
BLAST match view associations BLAST with LOC100626328 LOC100626328 LOC100626328 Ubiquitin carboxyl-terminal hydrolase	protein from Sus scrofa	4.0e-35
BLAST match view associations BLAST with J9JHA0 J9JHA0 J9JHA0 Uncharacterized protein	protein from Canis lupus familiaris	3.6e-34
BLAST match view associations BLAST with UBP21 UBP21 UBP21 AT5G46740	protein from Arabidopsis thaliana	5.9e-31
BLAST match view associations BLAST with Usp36 Usp36 Usp36 Ubiquitin carboxyl-terminal hydrolase 36	protein from Drosophila virilis	2.4e-30
BLAST match view associations BLAST with Usp36 Usp36 Usp36 Ubiquitin carboxyl-terminal hydrolase 36	protein from Drosophila erecta	6.5e-30
BLAST match view associations BLAST with Usp36 Usp36 Usp36 Ubiquitin carboxyl-terminal hydrolase 36	protein from Drosophila willistoni	3.4e-29
BLAST match view associations BLAST with Usp36 Usp36 Usp36 Ubiquitin carboxyl-terminal hydrolase 36	protein from Drosophila pseudoobscura pseudoobscura	8.2e-28
BLAST match view associations BLAST with Usp36 Usp36 Usp36 Ubiquitin carboxyl-terminal hydrolase 36	protein from Drosophila simulans	2.1e-27
BLAST match view associations BLAST with Usp36 Usp36 Usp36 Ubiquitin carboxyl-terminal hydrolase 36	protein from Drosophila mojavensis	6.8e-27
BLAST match view associations BLAST with Usp36 Usp36 Usp36 Ubiquitin carboxyl-terminal hydrolase 36	protein from Drosophila ananassae	7.3e-27
BLAST match view associations BLAST with Usp36 Usp36 Usp36 Ubiquitin carboxyl-terminal hydrolase 36	protein from Drosophila grimshawi	8.7e-27
BLAST match view associations BLAST with Usp36 Usp36 Usp36 Ubiquitin carboxyl-terminal hydrolase 36	protein from Drosophila yakuba	9.9e-27
BLAST match view associations BLAST with scny scny scny scrawny	protein from Drosophila melanogaster	2.0e-26
BLAST match view associations BLAST with UBP20 UBP20 UBP20 AT4G17895	protein from Arabidopsis thaliana	8.7e-24
BLAST match view associations BLAST with USP3 USP3 USP3 Ubiquitin carboxyl-terminal hydrolase 3	protein from Homo sapiens	4.9e-23
BLAST match view associations BLAST with not not not non-stop	protein from Drosophila melanogaster	1.3e-22
BLAST match view associations BLAST with Usp8 Usp8 Usp8 ubiquitin specific peptidase 8	gene from Rattus norvegicus	7.5e-22
BLAST match view associations BLAST with USP2 USP2 USP2 Ubiquitin carboxyl-terminal hydrolase 2	protein from Gallus gallus	9.3e-22
BLAST match view associations BLAST with USP8 USP8 USP8 Ubiquitin carboxyl-terminal hydrolase	protein from Bos taurus	1.1e-21
BLAST match view associations BLAST with UBP8 UBP8 UBP8 Ubiquitin-specific protease that is a component of the SAGA complex	gene from Saccharomyces cerevisiae	3.8e-21
BLAST match view associations BLAST with E1C0G5 E1C0G5 E1C0G5 Ubiquitin carboxyl-terminal hydrolase	protein from Gallus gallus	4.2e-21
BLAST match view associations BLAST with USP46 USP46 USP46 Ubiquitin carboxyl-terminal hydrolase 46	protein from Homo sapiens	6.4e-21
BLAST match view associations BLAST with USP8 USP8 USP8 Ubiquitin carboxyl-terminal hydrolase	protein from Sus scrofa	7.2e-21
BLAST match view associations BLAST with Usp8 Usp8 Usp8 ubiquitin specific peptidase 8	protein from Mus musculus	9.3e-21
BLAST match view associations BLAST with USP36 USP36 USP36 Ubiquitin carboxyl-terminal hydrolase 36	protein from Homo sapiens	1.0e-20
BLAST match view associations BLAST with UBP2 UBP2 UBP2 AT1G04860	protein from Arabidopsis thaliana	1.1e-20
BLAST match view associations BLAST with usp2a usp2a usp2a ubiquitin specific peptidase 2a	gene_product from Danio rerio	1.5e-20
BLAST match view associations BLAST with USP8 USP8 USP8 Ubiquitin carboxyl-terminal hydrolase	protein from Bos taurus	1.6e-20
BLAST match view associations BLAST with USP8 USP8 USP8 Ubiquitin carboxyl-terminal hydrolase	protein from Homo sapiens	1.8e-20
BLAST match view associations BLAST with USP48 USP48 USP48 Uncharacterized protein	protein from Bos taurus	1.9e-20
BLAST match view associations BLAST with usp48 usp48 usp48 ubiquitin specific peptidase 48	gene_product from Danio rerio	2.0e-20
BLAST match view associations BLAST with USP8 USP8 USP8 Ubiquitin carboxyl-terminal hydrolase	protein from Canis lupus familiaris	2.1e-20
BLAST match view associations BLAST with USP8 USP8 USP8 Ubiquitin carboxyl-terminal hydrolase 8	protein from Homo sapiens	2.1e-20
BLAST match view associations BLAST with UBP3 UBP3 UBP3 AT4G39910	protein from Arabidopsis thaliana	2.3e-20
BLAST match view associations BLAST with USP48 USP48 USP48 Ubiquitin carboxyl-terminal hydrolase 48	protein from Homo sapiens	2.5e-20
BLAST match view associations BLAST with USP48 USP48 USP48 Uncharacterized protein	protein from Canis lupus familiaris	2.5e-20
BLAST match view associations BLAST with USP48 USP48 USP48 Ubiquitin carboxyl-terminal hydrolase 48	protein from Homo sapiens	2.5e-20
BLAST match view associations BLAST with USP12P1 USP12P1 USP12P1 Ubiquitin carboxyl-terminal hydrolase	protein from Gallus gallus	3.6e-20
BLAST match view associations BLAST with Usp27x Usp27x Usp27x ubiquitin specific peptidase 27, X-linked	gene from Rattus norvegicus	4.0e-20
BLAST match view associations BLAST with usp22 usp22 usp22 ubiquitin specific peptidase 22	gene_product from Danio rerio	4.1e-20
BLAST match view associations BLAST with Usp27x Usp27x Usp27x ubiquitin specific peptidase 27, X chromosome	protein from Mus musculus	6.9e-20
BLAST match view associations BLAST with usp-3 usp-3 usp-3	gene from Caenorhabditis elegans	7.3e-20
Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  039539
        (484 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2168282 - symbol:UBP17 "AT5G65450" species:370...   974  4.5e-98   1
TAIR|locus:2121959 - symbol:UBP16 "ubiquitin-specific pro...   874  1.8e-87   1
TAIR|locus:2046678 - symbol:UBP19 "AT2G24640" species:370...   758  3.5e-75   1
TAIR|locus:2124809 - symbol:UBP18 "AT4G31670" species:370...   753  1.2e-74   1
DICTYBASE|DDB_G0274827 - symbol:DDB_G0274827 "putative ub...   537  5.3e-51   1
ZFIN|ZDB-GENE-030131-5739 - symbol:usp42 "ubiquitin speci...   507  8.7e-50   2
MGI|MGI:1924050 - symbol:Usp42 "ubiquitin specific peptid...   501  2.8e-49   2
ZFIN|ZDB-GENE-030131-5450 - symbol:usp36 "ubiquitin speci...   507  8.0e-49   2
MGI|MGI:1919594 - symbol:Usp36 "ubiquitin specific peptid...   517  1.4e-48   1
UNIPROTKB|E1C4I0 - symbol:USP42 "Ubiquitin carboxyl-termi...   504  2.9e-48   2
UNIPROTKB|E7EWZ4 - symbol:USP42 "Ubiquitin carboxyl-termi...   503  3.7e-48   1
RGD|1309937 - symbol:Usp36 "ubiquitin specific peptidase ...   511  4.9e-48   1
UNIPROTKB|E2RHU7 - symbol:USP42 "Ubiquitin carboxyl-termi...   512  7.8e-48   1
UNIPROTKB|E1B9W9 - symbol:USP42 "Ubiquitin carboxyl-termi...   512  7.8e-48   1
UNIPROTKB|E2RKV1 - symbol:USP36 "Ubiquitin carboxyl-termi...   506  2.3e-47   1
UNIPROTKB|C9JPC9 - symbol:USP42 "Ubiquitin carboxyl-termi...   503  4.0e-47   1
UNIPROTKB|E1BGW4 - symbol:USP36 "Ubiquitin carboxyl-termi...   503  4.6e-47   1
UNIPROTKB|Q9P275 - symbol:USP36 "Ubiquitin carboxyl-termi...   503  4.8e-47   1
UNIPROTKB|Q9H9J4 - symbol:USP42 "Ubiquitin carboxyl-termi...   503  7.1e-47   1
UNIPROTKB|F1RZ74 - symbol:USP36 "Ubiquitin carboxyl-termi...   501  7.9e-47   1
RGD|1305231 - symbol:Usp42 "ubiquitin specific peptidase ...   501  1.2e-46   1
UNIPROTKB|C9JPN9 - symbol:USP17L12 "Ubiquitin carboxyl-te...   456  3.5e-43   1
UNIPROTKB|D6R901 - symbol:USP17L21 "Ubiquitin carboxyl-te...   456  3.5e-43   1
UNIPROTKB|C9JVI0 - symbol:USP17L11 "Ubiquitin carboxyl-te...   455  4.5e-43   1
UNIPROTKB|D6RCP7 - symbol:USP17L19 "Ubiquitin carboxyl-te...   455  4.5e-43   1
UNIPROTKB|C9JJH3 - symbol:USP17L10 "Ubiquitin carboxyl-te...   452  9.3e-43   1
UNIPROTKB|C9JLJ4 - symbol:USP17L13 "Ubiquitin carboxyl-te...   451  1.2e-42   1
UNIPROTKB|D6R9N7 - symbol:USP17L18 "Ubiquitin carboxyl-te...   451  1.2e-42   1
UNIPROTKB|D6RBQ6 - symbol:USP17L17 "Ubiquitin carboxyl-te...   451  1.2e-42   1
UNIPROTKB|I3L0E4 - symbol:USP17L13 "Ubiquitin carboxyl-te...   451  1.2e-42   1
UNIPROTKB|A8MUK1 - symbol:USP17L5 "Ubiquitin carboxyl-ter...   449  1.9e-42   1
UNIPROTKB|C9J2P7 - symbol:USP17L15 "Ubiquitin carboxyl-te...   449  1.9e-42   1
UNIPROTKB|D6RA61 - symbol:USP17L22 "Ubiquitin carboxyl-te...   449  1.9e-42   1
UNIPROTKB|D6RJB6 - symbol:USP17L20 "Ubiquitin carboxyl-te...   449  1.9e-42   1
UNIPROTKB|Q0WX57 - symbol:USP17L24 "Ubiquitin carboxyl-te...   449  1.9e-42   1
UNIPROTKB|Q6R6M4 - symbol:USP17L2 "Ubiquitin carboxyl-ter...   448  2.5e-42   1
POMBASE|SPCC1682.12c - symbol:ubp16 "ubiquitin C-terminal...   439  2.2e-41   1
UNIPROTKB|Q6QN14 - symbol:USP17L6 "Ubiquitin carboxyl-ter...   437  3.6e-41   1
UNIPROTKB|E2R2N1 - symbol:LOC609437 "Ubiquitin carboxyl-t...   433  9.6e-41   1
UNIPROTKB|A6NCW0 - symbol:USP17L3 "Ubiquitin carboxyl-ter...   432  1.2e-40   1
UNIPROTKB|A6NCW7 - symbol:USP17L4 "Inactive ubiquitin car...   431  1.6e-40   1
UNIPROTKB|P0C7I0 - symbol:USP17L8 "Inactive ubiquitin car...   430  2.0e-40   1
TAIR|locus:2090985 - symbol:UBP25 "ubiquitin-specific pro...   431  3.6e-40   1
UNIPROTKB|Q7RTZ2 - symbol:USP17L1P "Putative ubiquitin ca...   426  5.3e-40   1
MGI|MGI:107699 - symbol:Usp17la "ubiquitin specific pepti...   425  6.8e-40   1
UNIPROTKB|J9PAN5 - symbol:LOC609268 "Ubiquitin carboxyl-t...   422  1.4e-39   1
UNIPROTKB|P0C7H9 - symbol:USP17L7 "Inactive ubiquitin car...   421  1.8e-39   1
RGD|1562061 - symbol:Usp17l5 "ubiquitin specific peptidas...   417  4.8e-39   1
RGD|1565607 - symbol:RGD1565607 "similar to mouse deubiqu...   417  4.8e-39   1
UNIPROTKB|J9NSR8 - symbol:LOC609310 "Ubiquitin carboxyl-t...   413  1.3e-38   1
RGD|1588758 - symbol:LOC689730 "similar to ubiquitin spec...   411  2.1e-38   1
TAIR|locus:2174403 - symbol:UBP23 "ubiquitin-specific pro...   416  5.4e-38   1
UNIPROTKB|K7EMM6 - symbol:USP36 "Ubiquitin carboxyl-termi...   401  2.4e-37   1
UNIPROTKB|F1PQJ0 - symbol:LOC100686685 "Uncharacterized p...   386  9.2e-36   1
UNIPROTKB|E2R279 - symbol:E2R279 "Ubiquitin carboxyl-term...   383  1.9e-35   1
UNIPROTKB|I3LKE8 - symbol:LOC100626328 "Ubiquitin carboxy...   380  4.0e-35   1
UNIPROTKB|J9JHA0 - symbol:J9JHA0 "Uncharacterized protein...   371  3.6e-34   1
TAIR|locus:2178535 - symbol:UBP21 "ubiquitin-specific pro...   349  5.9e-31   1
UNIPROTKB|B4LG38 - symbol:Usp36 "Ubiquitin carboxyl-termi...   336  2.4e-30   2
UNIPROTKB|B3NC86 - symbol:Usp36 "Ubiquitin carboxyl-termi...   334  6.5e-30   2
UNIPROTKB|B4MLR8 - symbol:Usp36 "Ubiquitin carboxyl-termi...   329  3.4e-29   2
UNIPROTKB|Q2LZB1 - symbol:Usp36 "Ubiquitin carboxyl-termi...   329  8.2e-28   2
UNIPROTKB|B4QIS3 - symbol:Usp36 "Ubiquitin carboxyl-termi...   328  2.1e-27   1
UNIPROTKB|B4KXJ5 - symbol:Usp36 "Ubiquitin carboxyl-termi...   324  6.8e-27   2
UNIPROTKB|B3M3M6 - symbol:Usp36 "Ubiquitin carboxyl-termi...   325  7.3e-27   1
UNIPROTKB|B4IXE0 - symbol:Usp36 "Ubiquitin carboxyl-termi...   325  8.7e-27   2
UNIPROTKB|B4PIW8 - symbol:Usp36 "Ubiquitin carboxyl-termi...   324  9.9e-27   1
FB|FBgn0260936 - symbol:scny "scrawny" species:7227 "Dros...   322  2.0e-26   1
TAIR|locus:505006491 - symbol:UBP20 "ubiquitin-specific p...   298  8.7e-24   1
UNIPROTKB|B4DWJ6 - symbol:USP3 "Ubiquitin carboxyl-termin...   246  4.9e-23   2
FB|FBgn0013717 - symbol:not "non-stop" species:7227 "Dros...   268  1.3e-22   2
RGD|1304979 - symbol:Usp8 "ubiquitin specific peptidase 8...   274  7.5e-22   1
UNIPROTKB|O57429 - symbol:USP2 "Ubiquitin carboxyl-termin...   251  9.3e-22   2
UNIPROTKB|E1BF70 - symbol:USP8 "Ubiquitin carboxyl-termin...   273  1.1e-21   1
POMBASE|SPAC13A11.04c - symbol:ubp8 "SAGA complex ubiquit...   271  3.0e-21   1
SGD|S000004836 - symbol:UBP8 "Ubiquitin-specific protease...   271  3.8e-21   1
UNIPROTKB|E1C0G5 - symbol:E1C0G5 "Ubiquitin carboxyl-term...   278  4.2e-21   1
UNIPROTKB|H7BZK6 - symbol:USP46 "Ubiquitin carboxyl-termi...   251  6.4e-21   1
UNIPROTKB|F1RYL9 - symbol:USP8 "Ubiquitin carboxyl-termin...   276  7.2e-21   1
POMBASE|SPBC1703.12 - symbol:ubp9 "ubiquitin C-terminal h...   271  8.0e-21   1
MGI|MGI:1934029 - symbol:Usp8 "ubiquitin specific peptida...   275  9.3e-21   1
UNIPROTKB|E9PEW0 - symbol:USP36 "Ubiquitin carboxyl-termi...   272  1.0e-20   1
TAIR|locus:2010622 - symbol:UBP2 "ubiquitin-specific prot...   186  1.1e-20   3
ZFIN|ZDB-GENE-041212-59 - symbol:usp2a "ubiquitin specifi...   259  1.5e-20   2
UNIPROTKB|Q0IIM6 - symbol:USP8 "Ubiquitin carboxyl-termin...   273  1.6e-20   1
UNIPROTKB|B4DKA8 - symbol:USP8 "Ubiquitin carboxyl-termin...   272  1.8e-20   1
UNIPROTKB|E1BF92 - symbol:USP48 "Uncharacterized protein"...   272  1.9e-20   1
ZFIN|ZDB-GENE-050522-197 - symbol:usp48 "ubiquitin specif...   272  2.0e-20   1
UNIPROTKB|E2RH35 - symbol:USP8 "Ubiquitin carboxyl-termin...   272  2.1e-20   1
UNIPROTKB|P40818 - symbol:USP8 "Ubiquitin carboxyl-termin...   272  2.1e-20   1
TAIR|locus:2140074 - symbol:UBP3 "ubiquitin-specific prot...   246  2.3e-20   2
UNIPROTKB|Q86UV5 - symbol:USP48 "Ubiquitin carboxyl-termi...   271  2.5e-20   1
UNIPROTKB|F1PG27 - symbol:USP48 "Uncharacterized protein"...   271  2.5e-20   1
UNIPROTKB|B7ZKS7 - symbol:USP48 "Ubiquitin carboxyl-termi...   271  2.5e-20   1
UNIPROTKB|F1NVC5 - symbol:USP12P1 "Ubiquitin carboxyl-ter...   257  3.6e-20   1
RGD|1564628 - symbol:Usp27x "ubiquitin specific peptidase...   203  4.0e-20   2
ZFIN|ZDB-GENE-060512-211 - symbol:usp22 "ubiquitin specif...   201  4.1e-20   2
UNIPROTKB|F1LTX2 - symbol:F1LTX2 "Uncharacterized protein...   186  6.7e-20   2
MGI|MGI:1859645 - symbol:Usp27x "ubiquitin specific pepti...   201  6.9e-20   2
WB|WBGene00013506 - symbol:usp-3 species:6239 "Caenorhabd...   262  7.3e-20   1

WARNING:  Descriptions of 437 database sequences were not reported due to the
          limiting value of parameter V = 100.


>TAIR|locus:2168282 [details] [associations]
            symbol:UBP17 "AT5G65450" species:3702 "Arabidopsis
            thaliana" [GO:0004197 "cysteine-type endopeptidase activity"
            evidence=ISS] [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=IEA;ISS] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA;ISS] [GO:0008270 "zinc ion binding"
            evidence=IEA] InterPro:IPR001394 InterPro:IPR002893
            InterPro:IPR018200 Pfam:PF00443 Pfam:PF01753 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS01360 PROSITE:PS50235 PROSITE:PS50865
            EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0008270
            GO:GO:0008234 GO:GO:0006511 EMBL:AB011479 GO:GO:0004221
            eggNOG:COG5533 HSSP:P54578 HOGENOM:HOG000242869 KO:K11855
            EMBL:AF302667 IPI:IPI00540431 IPI:IPI00882576 RefSeq:NP_201348.1
            UniGene:At.16943 ProteinModelPortal:Q9FKP5 SMR:Q9FKP5
            MEROPS:C19.A06 PRIDE:Q9FKP5 EnsemblPlants:AT5G65450.1 GeneID:836670
            KEGG:ath:AT5G65450 TAIR:At5g65450 InParanoid:Q9FKP5 OMA:LEGAYML
            PhylomeDB:Q9FKP5 ProtClustDB:CLSN2686475 Genevestigator:Q9FKP5
            Uniprot:Q9FKP5
        Length = 731

 Score = 974 (347.9 bits), Expect = 4.5e-98, P = 4.5e-98
 Identities = 198/303 (65%), Positives = 234/303 (77%)

Query:    14 LILNAKDGSYPVSPIGILSKIQKIGSHLGHGREEDAHEFLRCAVDTMQSVCLKEFGAKGK 73
             LIL A+ G  P+SPI ILSK+QKIG HLG G+EEDAHEFLRCAVDTMQSV LKE  A G 
Sbjct:   380 LILKARGGESPLSPIKILSKLQKIGKHLGPGKEEDAHEFLRCAVDTMQSVFLKEAPAAGP 439

Query:    74 IAEETTLIGLTFGGYLRSKIKCLKCLGKSELYERMMDLTVEIDGDIGTLEEALAQFTASE 133
              AEETTL+GLTFGGYL SKIKC+ CL KSE  E MMDLTVEIDGDIG+LEEALAQFTA E
Sbjct:   440 FAEETTLVGLTFGGYLHSKIKCMACLHKSERPELMMDLTVEIDGDIGSLEEALAQFTAYE 499

Query:   134 ILVGENKYYCSRCKSYEKAKKKLTVLEEPNILTIVLKRFESGNFGKLNKSVWFPEVLNMA 193
             +L GEN+Y+C RCKSY+KAKKKL +LE PNILT+VLKRF+S NFGKL+K + FPE+L+++
Sbjct:   500 VLDGENRYFCGRCKSYQKAKKKLMILEGPNILTVVLKRFQSDNFGKLSKPIHFPELLDIS 559

Query:   194 PYMSRTGDGS-PMYSLYAVVVHLDVTNATFSGHYVCYVKNSHEEWFRIDDSTVIPVKLER 252
             PYMS    G  P+YSLYAVVVHLD  +  FSGHYVCY+K    +WF+IDDS V PV+LE 
Sbjct:   560 PYMSDPNHGDHPVYSLYAVVVHLDAMSTLFSGHYVCYIKTLDGDWFKIDDSNVFPVQLET 619

Query:   253 VLSEEAYMLLYARHSPRPPALIRNNVSHGVKSK-KKNLEAVDLNNTSKIR----SNSYIP 307
             VL E AYMLLYAR SPRP +  +N    G KSK ++NL A+     +K +    +NS +P
Sbjct:   620 VLLEGAYMLLYARDSPRPVS--KNG---GRKSKQRRNLAAIPSRKGNKKQRDGDNNSLLP 674

Query:   308 SLD 310
              +D
Sbjct:   675 RVD 677


>TAIR|locus:2121959 [details] [associations]
            symbol:UBP16 "ubiquitin-specific protease 16"
            species:3702 "Arabidopsis thaliana" [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] [GO:0004843
            "ubiquitin-specific protease activity" evidence=ISS] [GO:0005576
            "extracellular region" evidence=ISM] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA]
            [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008283 "cell
            proliferation" evidence=IGI] [GO:0009908 "flower development"
            evidence=IGI] [GO:0048364 "root development" evidence=IGI]
            [GO:0048366 "leaf development" evidence=IGI] [GO:0048367 "shoot
            system development" evidence=IGI] [GO:0000956 "nuclear-transcribed
            mRNA catabolic process" evidence=RCA] [GO:0006486 "protein
            glycosylation" evidence=RCA] [GO:0006487 "protein N-linked
            glycosylation" evidence=RCA] InterPro:IPR001394 InterPro:IPR002893
            InterPro:IPR018200 Pfam:PF00443 Pfam:PF01753 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS01360 PROSITE:PS50235 PROSITE:PS50865
            GO:GO:0016021 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0046872
            GO:GO:0008283 GO:GO:0008270 GO:GO:0008234 GO:GO:0048364
            GO:GO:0006511 EMBL:AL035356 GO:GO:0009908 EMBL:AL161561
            GO:GO:0048366 GO:GO:0004221 eggNOG:COG5533 EMBL:AF302666
            IPI:IPI00518628 PIR:T05578 RefSeq:NP_567705.1 UniGene:At.2551
            HSSP:P43593 ProteinModelPortal:Q9SB51 SMR:Q9SB51 MEROPS:C19.A07
            PaxDb:Q9SB51 PRIDE:Q9SB51 EnsemblPlants:AT4G24560.1 GeneID:828558
            KEGG:ath:AT4G24560 TAIR:At4g24560 HOGENOM:HOG000242869
            InParanoid:Q9SB51 KO:K11855 OMA:RCKSYEK PhylomeDB:Q9SB51
            ProtClustDB:CLSN2917604 Genevestigator:Q9SB51 Uniprot:Q9SB51
        Length = 1008

 Score = 874 (312.7 bits), Expect = 1.8e-87, P = 1.8e-87
 Identities = 190/396 (47%), Positives = 247/396 (62%)

Query:    14 LILNAKDGSYPVSPIGILSKIQKIGSHLGHGREEDAHEFLRCAVDTMQSVCLK--EFG-A 70
             L++ AK+   P+SP G+LS++Q IG  LG+G+EEDAHEFLR  VDTMQSVC+K  E+   
Sbjct:   593 LVVKAKEEKSPLSPNGLLSQLQNIGIFLGNGKEEDAHEFLRFVVDTMQSVCIKASEYDMT 652

Query:    71 KGKIAEETTLIGLTFGGYLRSKIKCLKCLGKSELYERMMDLTVEIDGDIGTLEEALAQFT 130
             K    E+TTLIGLTFGGYLRSKIKC+KC  KSEL E+MMDLTVEIDGDI TL++AL +FT
Sbjct:   653 KSSKLEDTTLIGLTFGGYLRSKIKCMKCQVKSELREKMMDLTVEIDGDISTLDDALRRFT 712

Query:   131 ASEILVGENKYYCSRCKSYEKAKKKLTVLEEPNILTIVLKRFESGNFGKLNKSVWFPEVL 190
              +EIL GENKY C  CKSYE+AKKKL + E PN+LTI LKRF++G FGKLNK + FPE L
Sbjct:   713 RTEILDGENKYRCGSCKSYERAKKKLKITEPPNVLTIALKRFQAGKFGKLNKLIRFPETL 772

Query:   191 NMAPYMSRTGDGSPMYSLYAVVVHLDVTNATFSGHYVCYVKNSHEEWFRIDDSTVIPVKL 250
             ++APY+S   + S  Y LY V+VHLDV NA FSGHYVCY++N ++ W++ DDSTV+   +
Sbjct:   773 DLAPYVSGGSEKSHDYKLYGVIVHLDVMNAAFSGHYVCYIRNQNK-WYKADDSTVVTSDV 831

Query:   251 ERVLSEEAYMLLYARHSPRPPALIRNNVSHGVKSKKKNLEAVDLNNTSKI-RS-NSYIPS 308
             ER+L++ AYML YAR +P PP L     +    +KK  +     N  S I RS ++  P 
Sbjct:   832 ERILTKGAYMLFYARCTPTPPRLAVCTKTEA-SNKKSRVPLPKANEKSTISRSVSTSSPE 890

Query:   309 LDSKAQQKPCTDSNQLFDRDEWKFRSMQRSPAVDXXXXXXXXXXXXXXXXXXXXXXXXXX 368
             L S       + + Q F      + S QR   +                           
Sbjct:   891 LSSNTPGGGRSGNIQSF------YSSFQRLQKILEEDSASDSSSLFDSNSDECSCSTDST 944

Query:   369 XXXDLSDLIFGDTPSWYRSYGITSDSIASSSYQNSN 404
                D +D IFGD     R++G +     +SS  +S+
Sbjct:   945 SMDDFADFIFGDHQG--RAHGQSETPSPTSSSSSSS 978


>TAIR|locus:2046678 [details] [associations]
            symbol:UBP19 "AT2G24640" species:3702 "Arabidopsis
            thaliana" [GO:0004197 "cysteine-type endopeptidase activity"
            evidence=ISS] [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA;ISS]
            [GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001394
            InterPro:IPR002893 InterPro:IPR018200 Pfam:PF00443 Pfam:PF01753
            PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS01360 PROSITE:PS50235
            PROSITE:PS50865 GO:GO:0016021 EMBL:CP002685
            GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0008270 GO:GO:0008234
            GO:GO:0006511 EMBL:AC006954 GO:GO:0004221 eggNOG:COG5533
            HSSP:P54578 KO:K11855 HOGENOM:HOG000097839 ProtClustDB:CLSN2685876
            EMBL:AF360315 EMBL:AY056366 IPI:IPI00518677 PIR:B84639
            RefSeq:NP_565576.1 UniGene:At.14198 ProteinModelPortal:Q9SJA1
            SMR:Q9SJA1 MEROPS:C19.A09 EnsemblPlants:AT2G24640.1 GeneID:817000
            KEGG:ath:AT2G24640 TAIR:At2g24640 InParanoid:Q9SJA1 OMA:PLEKEHS
            PhylomeDB:Q9SJA1 Genevestigator:Q9SJA1 Uniprot:Q9SJA1
        Length = 672

 Score = 758 (271.9 bits), Expect = 3.5e-75, P = 3.5e-75
 Identities = 151/284 (53%), Positives = 194/284 (68%)

Query:    23 YPVSPIGILSKIQKIGSHLGHGREEDAHEFLRCAVDTMQSVCLKEFGAKGKI---AEETT 79
             +P SP+ I+S++  IG +LG+GR+EDAHE +R A+D MQSVCL EFG +  +   A+ETT
Sbjct:   234 FPFSPMNIISRLPNIGGNLGYGRQEDAHELMRFAIDMMQSVCLDEFGGEKVVPPRAQETT 293

Query:    80 LIGLTFGGYLRSKIKCLKCLGKSELYERMMDLTVEIDGDIGTLEEALAQFTASEILVGEN 139
             LI   FGG L+S+++C  C   S+ YE MMDLTVEI GD  +LEE L QFTA E L G+N
Sbjct:   294 LIQYIFGGLLQSQVQCTACSNVSDQYENMMDLTVEIHGDAVSLEECLDQFTAKEWLQGDN 353

Query:   140 KYYCSRCKSYEKAKKKLTVLEEPNILTIVLKRFESGNFGKLNKSVWFPEVLNMAPYMSRT 199
              Y C RC  Y KA K+L++   PNILTI LKRF+ G FGKLNK + FPE  ++ PYMS  
Sbjct:   354 LYKCDRCDDYVKACKRLSIRCAPNILTIALKRFQGGRFGKLNKRISFPETFDLGPYMSGG 413

Query:   200 GDGSPMYSLYAVVVHLDVTNATFSGHYVCYVKNSHEEWFRIDDSTVIPVKLERVLSEEAY 259
             G+GS +Y LYAV+VHLD+ NA+F GHY+CYVK+    W+RIDDS V  V+LE VLS+ AY
Sbjct:   414 GEGSDVYKLYAVIVHLDMLNASFFGHYICYVKDFRGNWYRIDDSEVEKVELEDVLSQRAY 473

Query:   260 MLLYARHSPRPPALIRNNVSHGVKSKKKNLEAVDLNNTSKIRSN 303
             MLLY+R  PRP  L R+  S     KK +    + N    + S+
Sbjct:   474 MLLYSRVQPRPSNL-RSEESQD--EKKTDTLNTESNQDGSVESS 514


>TAIR|locus:2124809 [details] [associations]
            symbol:UBP18 "AT4G31670" species:3702 "Arabidopsis
            thaliana" [GO:0004197 "cysteine-type endopeptidase activity"
            evidence=ISS] [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=IEA;ISS] [GO:0005576 "extracellular region" evidence=ISM]
            [GO:0006511 "ubiquitin-dependent protein catabolic process"
            evidence=IEA;ISS] [GO:0008270 "zinc ion binding" evidence=IEA]
            InterPro:IPR001394 InterPro:IPR002893 InterPro:IPR018200
            Pfam:PF00443 Pfam:PF01753 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS01360 PROSITE:PS50235 PROSITE:PS50865 GO:GO:0016021
            EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0046872 GO:GO:0008270
            GO:GO:0008234 GO:GO:0006511 GO:GO:0004221 EMBL:AL161579
            eggNOG:COG5533 EMBL:AL031004 KO:K11855 EMBL:AY142532 EMBL:AK175467
            EMBL:AK176703 IPI:IPI00536587 PIR:T05103 RefSeq:NP_194895.1
            UniGene:At.31726 HSSP:O75398 ProteinModelPortal:Q67XW5 SMR:Q67XW5
            MEROPS:C19.A08 PRIDE:Q67XW5 EnsemblPlants:AT4G31670.1 GeneID:829295
            KEGG:ath:AT4G31670 TAIR:At4g31670 HOGENOM:HOG000097839
            InParanoid:Q67XW5 OMA:ECCSEVE PhylomeDB:Q67XW5
            ProtClustDB:CLSN2685876 Genevestigator:Q67XW5 Uniprot:Q67XW5
        Length = 631

 Score = 753 (270.1 bits), Expect = 1.2e-74, P = 1.2e-74
 Identities = 150/301 (49%), Positives = 206/301 (68%)

Query:    18 AKDGSYPVSPIGILSKIQKIGSHLGHGREEDAHEFLRCAVDTMQSVCLKEFGAKGKI--- 74
             A    +P SP+ I+S++  IG  LG+GR+EDAHEF+R A+D MQSVCL EFG +  +   
Sbjct:   223 ASQSRFPFSPMNIISRLTNIGGTLGYGRQEDAHEFMRYAIDMMQSVCLDEFGGEKIVPPR 282

Query:    75 AEETTLIGLTFGGYLRSKIKCLKCLGKSELYERMMDLTVEIDGDIGTLEEALAQFTASEI 134
             ++ETTLI   FGG L+S+++C  C   S+ YE MMDL VE+ GD G+LEE L QFTA E 
Sbjct:   283 SQETTLIQYIFGGLLQSQVQCTVCNHVSDQYENMMDLIVEMHGDAGSLEECLDQFTAEEW 342

Query:   135 LVGENKYYCSRCKSYEKAKKKLTVLEEPNILTIVLKRFESGNFGKLNKSVWFPEVLNMAP 194
             L G+N Y C RC  Y KA K+LT+   PNILTI LKR++ G +GKLNK + FPE L++ P
Sbjct:   343 LHGDNMYKCDRCSDYVKACKRLTIRRAPNILTIALKRYQGGRYGKLNKRISFPETLDLNP 402

Query:   195 YMSRTGDGSPMYSLYAVVVHLDVTNATFSGHYVCYVKNSHEEWFRIDDSTVIPVKLERVL 254
             YMS  GDGS +Y LYAV+VHLD+ NA+F GHY+CY+K+    W+RIDDS +  V+LE VL
Sbjct:   403 YMSEGGDGSDVYKLYAVIVHLDMLNASFFGHYICYIKDFCGNWYRIDDSEIESVELEDVL 462

Query:   255 SEEAYMLLYARHSPRPPA-LIRNNVSHGVKSKKKNLEAVDLNNTSK-IRSNSYIPSLDSK 312
             S+ AYMLLY+R   R  +  +R+ V    K +KK  + +D  +  K +  +S + +++S+
Sbjct:   463 SQRAYMLLYSRIQARSSSSCLRSEV----KDEKKT-DTLDTESCVKELVESSMVGAIESR 517

Query:   313 A 313
             +
Sbjct:   518 S 518


>DICTYBASE|DDB_G0274827 [details] [associations]
            symbol:DDB_G0274827 "putative ubiquitin
            carboxyl-terminal hydrolase (UCH)" species:44689 "Dictyostelium
            discoideum" [GO:0006511 "ubiquitin-dependent protein catabolic
            process" evidence=IEA] [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0005575 "cellular_component"
            evidence=ND] [GO:0016787 "hydrolase activity" evidence=IEA]
            [GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
            [GO:0008233 "peptidase activity" evidence=IEA] [GO:0006508
            "proteolysis" evidence=IEA] InterPro:IPR001394 InterPro:IPR018200
            Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235
            dictyBase:DDB_G0274827 GO:GO:0008234 EMBL:AAFI02000012
            GO:GO:0006511 GO:GO:0004221 eggNOG:COG5077 KO:K11855
            RefSeq:XP_643982.1 ProteinModelPortal:Q86J16
            EnsemblProtists:DDB0237738 GeneID:8619408 KEGG:ddi:DDB_G0274827
            OMA:SHEFIRF ProtClustDB:CLSZ2846888 Uniprot:Q86J16
        Length = 919

 Score = 537 (194.1 bits), Expect = 5.3e-51, P = 5.3e-51
 Identities = 121/287 (42%), Positives = 178/287 (62%)

Query:    19 KDGSYPVSPIGILSKIQKIGSHLGHGREEDAHEFLRCAVDTMQSVCLKEFGAKGKIAEE- 77
             K G   ++P  I S I+KI      GR+ED+HEF+R  ++++Q V L ++  KG I    
Sbjct:   291 KCGGKSITPKEIASNIRKIAPTFRIGRQEDSHEFIRFMIESLQKVSLSKY-PKGSINHRD 349

Query:    78 --TTLIGLTFGGYLRSKIKCLKCLGKSELYERMMDLTVEIDGDIGTLEEALAQFTASEIL 135
               TT+IG  FGGYLRS++KC +C  +S  Y+  MDL V+I+    +L + L  F  SE+L
Sbjct:   350 AMTTVIGSIFGGYLRSQVKCSQCQYESNTYDPFMDLCVDIN-QADSLTKGLTNFVKSELL 408

Query:   136 VGENKYYCSRCKSYEKAKKKLTVLEEPNILTIVLKRFES-GNFG-KLNKSVWFPEVLNMA 193
              G NKY CS+CK   KA+K+L +   P ILT  +KRF   G++G K+N+ + F + LN++
Sbjct:   409 DGSNKYKCSKCKKLVKAQKRLQIHIAPPILTCQIKRFSFLGSYGGKINRQIQFDQSLNLS 468

Query:   194 PYMSRTGDGSPMYSLYAVVVHLDVTNATFSGHYVCYVKNSHEEWFRIDDSTVIPVKLERV 253
             P+M+++ + S +Y LYAV+VHL    +T SGHY CYVK S+  W+ +DDS+V  V L  V
Sbjct:   469 PFMTQSNNHS-IYDLYAVLVHLG--GSTSSGHYYCYVKGSNGIWYNMDDSSVSQVSLNTV 525

Query:   254 LSEEAYMLLYARHSPRPPALIRNNVSHGVKSKKKNLEAVDLNNTSKI 300
             LS++AYML Y++ +    ++  N VS      K+ L+  D   TSKI
Sbjct:   526 LSQKAYMLFYSKRNI-DQSINTNTVSINTIGNKRKLD--DEKLTSKI 569


>ZFIN|ZDB-GENE-030131-5739 [details] [associations]
            symbol:usp42 "ubiquitin specific peptidase 42"
            species:7955 "Danio rerio" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0008233 "peptidase activity"
            evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
            [GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
            [GO:0006508 "proteolysis" evidence=IEA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 ZFIN:ZDB-GENE-030131-5739 GO:GO:0008234
            GO:GO:0006511 GO:GO:0004221 GeneTree:ENSGT00670000097591
            EMBL:CR932017 IPI:IPI00506707 Ensembl:ENSDART00000003375
            ArrayExpress:F1QSB4 Bgee:F1QSB4 Uniprot:F1QSB4
        Length = 1047

 Score = 507 (183.5 bits), Expect = 8.7e-50, Sum P(2) = 8.7e-50
 Identities = 107/253 (42%), Positives = 159/253 (62%)

Query:    18 AKDGSYPVSPIGILSKIQKIGSHLGHGREEDAHEFLRCAVDTMQSVCLKEFGAK-GKIAE 76
             A  G+  + PI +L+++++IG H   G +EDAHEFLR  VD MQ  CL   G K  +  +
Sbjct:   171 ANSGNV-IKPISVLNELKRIGKHFRFGSQEDAHEFLRYTVDAMQKSCLP--GNKLDRQTQ 227

Query:    77 ETTLIGLTFGGYLRSKIKCLKCLGKSELYERMMDLTVEIDGDIGTLEEALAQFTASEILV 136
              TT +   FGGYLRS++KCL C   S+ ++  +D+++EI     TL +A  QF   E L 
Sbjct:   228 ATTFVHQIFGGYLRSRVKCLNCKAVSDTFDPYLDISLEIK-TAQTLSKAFEQFVKPEQLD 286

Query:   137 GENKYYCSRCKSYEKAKKKLTVLEEPNILTIVLKRFESGNFGKLNKSVWFPEVLNMAPYM 196
             G+N Y CS+CK    A K+ TV    N+LTI LKRF + N GK+ K V + E L++ P+M
Sbjct:   287 GDNAYKCSKCKKMVTASKRFTVHRSSNVLTISLKRFTNFNGGKITKDVRYAEHLDLRPFM 346

Query:   197 SRTGDGSP-MYSLYAVVVHLDVTNATFSGHYVCYVKNSHEEWFRIDDSTVIPVKLERVLS 255
             S++  G P +Y+LYAV+VH   +    +GHY CY+K S+ +W++++DS+V    +  VL+
Sbjct:   347 SQS-HGEPQIYALYAVLVHSGFS--CHAGHYYCYIKASNGQWYQMNDSSVSLSDIRTVLN 403

Query:   256 EEAYMLLYARHSP 268
             ++AY+L Y R SP
Sbjct:   404 QQAYLLFYIR-SP 415

 Score = 48 (22.0 bits), Expect = 8.7e-50, Sum P(2) = 8.7e-50
 Identities = 15/45 (33%), Positives = 17/45 (37%)

Query:   380 DTPSWYRSYGITSDSIASSSYQNSNVGSEGENDAWQHGWREGLGR 424
             D   W R     SDS   S Y N N    G ++    G  E  GR
Sbjct:   924 DERDWNRDRRFGSDSYRPSGYHNRN----GYSNHSHRGMEEAHGR 964


>MGI|MGI:1924050 [details] [associations]
            symbol:Usp42 "ubiquitin specific peptidase 42" species:10090
            "Mus musculus" [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=IEA] [GO:0004843 "ubiquitin-specific protease activity"
            evidence=IDA] [GO:0005575 "cellular_component" evidence=ND]
            [GO:0006508 "proteolysis" evidence=IEA] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA]
            [GO:0007283 "spermatogenesis" evidence=TAS] [GO:0008233 "peptidase
            activity" evidence=IEA] [GO:0008234 "cysteine-type peptidase
            activity" evidence=IEA] [GO:0016579 "protein deubiquitination"
            evidence=IDA] [GO:0016787 "hydrolase activity" evidence=IEA]
            [GO:0030154 "cell differentiation" evidence=IEA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 MGI:MGI:1924050 GO:GO:0030154 EMBL:CH466529
            GO:GO:0008234 GO:GO:0007283 GO:GO:0006511 GO:GO:0016579
            GO:GO:0004221 eggNOG:COG5533 KO:K11855 GeneTree:ENSGT00670000097591
            OMA:ALHSENP CTD:84132 HOGENOM:HOG000236355 HOVERGEN:HBG080724
            OrthoDB:EOG4RV2RB EMBL:BC137852 IPI:IPI00352204 RefSeq:NP_084025.2
            UniGene:Mm.259620 ProteinModelPortal:B2RQC2 SMR:B2RQC2
            PhosphoSite:B2RQC2 PRIDE:B2RQC2 Ensembl:ENSMUST00000053287
            GeneID:76800 KEGG:mmu:76800 UCSC:uc009akp.1 InParanoid:B2RQC2
            NextBio:345843 Bgee:B2RQC2 Genevestigator:B2RQC2 Uniprot:B2RQC2
        Length = 1324

 Score = 501 (181.4 bits), Expect = 2.8e-49, Sum P(2) = 2.8e-49
 Identities = 100/242 (41%), Positives = 150/242 (61%)

Query:    25 VSPIGILSKIQKIGSHLGHGREEDAHEFLRCAVDTMQSVCLKEFGAKGKIAEETTLIGLT 84
             + P+ +++++++I  H   G +EDAHEFL+  VD MQ  CL       +  + TTL+   
Sbjct:   173 IKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACLNGSNKLDRHTQATTLVCQI 232

Query:    85 FGGYLRSKIKCLKCLGKSELYERMMDLTVEIDGDIGTLEEALAQFTASEILVGENKYYCS 144
             FGGYLRS++KCL C G S+ ++  +D+T+EI     ++ +AL QF   E L GEN Y CS
Sbjct:   233 FGGYLRSRVKCLNCKGVSDTFDPYLDITLEIKA-AQSVTKALEQFVKPEQLDGENSYKCS 291

Query:   145 RCKSYEKAKKKLTVLEEPNILTIVLKRFESGNFGKLNKSVWFPEVLNMAPYMSRTGDGSP 204
             +CK    A K+ T+    N+LTI LKRF +   GK+ K V +PE L++ PYMS+  +G P
Sbjct:   292 KCKKMVPASKRFTIHRSSNVLTISLKRFANFTGGKIAKDVKYPEYLDIRPYMSQP-NGEP 350

Query:   205 M-YSLYAVVVHLDVTNATFSGHYVCYVKNSHEEWFRIDDSTVIPVKLERVLSEEAYMLLY 263
             + Y LYAV+VH        +GHY CY+K S+  W++++DS V    +  VL+++AY+L Y
Sbjct:   351 IIYVLYAVLVHTGFN--CHAGHYFCYIKASNGLWYQMNDSIVSTSDIRAVLNQQAYVLFY 408

Query:   264 AR 265
              R
Sbjct:   409 IR 410

 Score = 54 (24.1 bits), Expect = 2.8e-49, Sum P(2) = 2.8e-49
 Identities = 21/73 (28%), Positives = 37/73 (50%)

Query:   246 IPVKLERVLSEEAYMLLY-ARHSPRPPALIRNNVSHGVKSKKKNLEAVDLNNTSKIRSNS 304
             + V LER L E+A + +  + HS   P     + S  VKS+K+  E ++ NN  ++    
Sbjct:  1132 LAVPLERHLQEKAALSVQDSSHSL--PERFHEHKS--VKSRKRRYETLE-NNDGRLEKKV 1186

Query:   305 YIPSLDSKAQQKP 317
             +  SL+    ++P
Sbjct:  1187 H-KSLEKDTLEEP 1198

 Score = 47 (21.6 bits), Expect = 1.5e-48, Sum P(2) = 1.5e-48
 Identities = 15/47 (31%), Positives = 24/47 (51%)

Query:   276 NNVSHG--VKSKKKNLEAVDLNNTSKIRSNSYIPSLD---SKAQQKP 317
             NN  HG  +++  K   +  + N S I+S S +P+     S+A  KP
Sbjct:   539 NNSLHGPCLEAPSKAAPSSTITNPSAIQSTSNVPTTSTSPSEACPKP 585


>ZFIN|ZDB-GENE-030131-5450 [details] [associations]
            symbol:usp36 "ubiquitin specific peptidase 36"
            species:7955 "Danio rerio" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0016787 "hydrolase activity"
            evidence=IEA] [GO:0008234 "cysteine-type peptidase activity"
            evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008233
            "peptidase activity" evidence=IEA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 ZFIN:ZDB-GENE-030131-5450 GO:GO:0008234
            GO:GO:0006511 GO:GO:0004221 KO:K11855 CTD:57602
            GeneTree:ENSGT00670000097591 EMBL:CT573423 IPI:IPI00617189
            RefSeq:XP_688241.3 UniGene:Dr.10523 Ensembl:ENSDART00000124540
            Ensembl:ENSDART00000129598 GeneID:327239 KEGG:dre:327239
            NextBio:20809941 Uniprot:E7F4C0
        Length = 1104

 Score = 507 (183.5 bits), Expect = 8.0e-49, Sum P(2) = 8.0e-49
 Identities = 99/256 (38%), Positives = 150/256 (58%)

Query:    25 VSPIGILSKIQKIGSHLGHGREEDAHEFLRCAVDTMQSVCLKEFGAKGKIAEETTLIGLT 84
             + P+  +  ++KI  H   G +EDAHEFLR  +D MQ  CL  +    +  + TTL+   
Sbjct:   185 IKPVSFIRDLKKIARHFRFGSQEDAHEFLRYTIDAMQKACLNGYPKLDRQTQATTLVHQI 244

Query:    85 FGGYLRSKIKCLKCLGKSELYERMMDLTVEIDGDIGTLEEALAQFTASEILVGENKYYCS 144
             FGGYLRS++KC  C   S+ Y+  +D+ +EI      +  AL  F   ++L GEN Y C+
Sbjct:   245 FGGYLRSRVKCSICKSVSDTYDPYLDIALEIR-QAANIVRALELFVKPDVLSGENAYMCA 303

Query:   145 RCKSYEKAKKKLTVLEEPNILTIVLKRFESGNFGKLNKSVWFPEVLNMAPYMSRTGDGSP 204
             +CK    A K+ TV    N+LT+ LKRF + + GK+ K V +PE LN+ PYMS++     
Sbjct:   304 KCKKKVPATKRFTVHRTSNVLTLSLKRFANFSGGKITKDVGYPEFLNIRPYMSQSSGDPV 363

Query:   205 MYSLYAVVVHLDVTNATFSGHYVCYVKNSHEEWFRIDDSTVIPVKLERVLSEEAYMLLYA 264
             MY LYAV+VH   +    +GHY CYVK S+ +W++++DS V    ++ VL+++AY+L Y 
Sbjct:   364 MYGLYAVLVHSGYS--CHAGHYYCYVKASNGQWYQMNDSMVHSSNIKVVLNQQAYVLFYL 421

Query:   265 RHSPRPPALIRNNVSH 280
             R   +     + N+ H
Sbjct:   422 RIPEKKNTDAKQNMVH 437

 Score = 40 (19.1 bits), Expect = 8.0e-49, Sum P(2) = 8.0e-49
 Identities = 9/31 (29%), Positives = 16/31 (51%)

Query:   265 RHSPRPPALIRNNVSHGVKSKKKNLEAVDLN 295
             +  P P  +  + V  G KS + + EA D++
Sbjct:   955 KSKPAPVIVWDSQVQDGFKSSQNHEEAEDMS 985


>MGI|MGI:1919594 [details] [associations]
            symbol:Usp36 "ubiquitin specific peptidase 36" species:10090
            "Mus musculus" [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006508
            "proteolysis" evidence=IEA] [GO:0006511 "ubiquitin-dependent
            protein catabolic process" evidence=IEA] [GO:0008233 "peptidase
            activity" evidence=IEA] [GO:0008234 "cysteine-type peptidase
            activity" evidence=IEA] [GO:0016787 "hydrolase activity"
            evidence=IEA] InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443
            PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 MGI:MGI:1919594
            GO:GO:0005730 GO:GO:0008234 GO:GO:0006511 GO:GO:0004221
            EMBL:AL591404 eggNOG:COG5533 KO:K11855 CTD:57602
            HOGENOM:HOG000154759 OMA:VTHPAKA OrthoDB:EOG4V9TQ1 EMBL:AK129363
            IPI:IPI00929784 RefSeq:NP_001028700.1 UniGene:Mm.232293
            ProteinModelPortal:B1AQJ2 SMR:B1AQJ2 PRIDE:B1AQJ2
            Ensembl:ENSMUST00000092382 Ensembl:ENSMUST00000106296 GeneID:72344
            KEGG:mmu:72344 UCSC:uc007mot.2 GeneTree:ENSGT00670000097591
            InParanoid:B1AQJ2 ChiTaRS:USP36 NextBio:336077 Bgee:B1AQJ2
            Genevestigator:B1AQJ2 Uniprot:B1AQJ2
        Length = 1098

 Score = 517 (187.1 bits), Expect = 1.4e-48, P = 1.4e-48
 Identities = 112/300 (37%), Positives = 170/300 (56%)

Query:    18 AKDGSYPVSPIGILSKIQKIGSHLGHGREEDAHEFLRCAVDTMQSVCLKEFGAKGKIAEE 77
             A  G+  + P+  +  ++KI  H   G +EDAHEFLR  +D MQ  CL  +    +  + 
Sbjct:   179 ANSGN-AIKPVSFIRDLKKIARHFRFGNQEDAHEFLRYTIDAMQKACLNGYAKLDRQTQA 237

Query:    78 TTLIGLTFGGYLRSKIKCLKCLGKSELYERMMDLTVEIDGDIGTLEEALAQFTASEILVG 137
             TTL+   FGGYLRS++KC  C   S+ Y+  +D+ +EI      +  AL  F  S++L G
Sbjct:   238 TTLVHQIFGGYLRSRVKCSVCKSVSDTYDPYLDIALEIR-QAANIVRALELFVKSDVLSG 296

Query:   138 ENKYYCSRCKSYEKAKKKLTVLEEPNILTIVLKRFESGNFGKLNKSVWFPEVLNMAPYMS 197
             EN Y C++CK    A K+ T+    N+LT+ LKRF + + GK+ K V +PE LN+ PYMS
Sbjct:   297 ENAYMCAKCKKKVPASKRFTIHRTSNVLTLSLKRFANFSGGKITKDVGYPEFLNIRPYMS 356

Query:   198 RTGDGSPMYSLYAVVVHLDVTNATFSGHYVCYVKNSHEEWFRIDDSTVIPVKLERVLSEE 257
             ++     MY LYAV+VH   +    +GHY CYVK S+ +W++++DS V    ++ VL+++
Sbjct:   357 QSSGDPVMYGLYAVLVHSGYS--CHAGHYYCYVKASNGQWYQMNDSLVHSSNVKVVLNQQ 414

Query:   258 AYMLLYAR--HSPRPPALIRNNVSHGVKSKKKNLEAVDLNNTSKIRSNSYIPS-LDSKAQ 314
             AY+L Y R   S + P    + V   + S+ K    V   ++ K   N  +PS L +K Q
Sbjct:   415 AYVLFYLRIPGSKKSPEGPVSRVGATLPSRPK----VVPEHSKKSPGNGVVPSPLMAKRQ 470


>UNIPROTKB|E1C4I0 [details] [associations]
            symbol:USP42 "Ubiquitin carboxyl-terminal hydrolase"
            species:9031 "Gallus gallus" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0008234 "cysteine-type
            peptidase activity" evidence=IEA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 GO:GO:0008234 GO:GO:0006511 GO:GO:0004221
            GeneTree:ENSGT00670000097591 OMA:ALHSENP EMBL:AADN02023911
            IPI:IPI00603557 Ensembl:ENSGALT00000005338 Uniprot:E1C4I0
        Length = 1234

 Score = 504 (182.5 bits), Expect = 2.9e-48, Sum P(2) = 2.9e-48
 Identities = 98/242 (40%), Positives = 153/242 (63%)

Query:    25 VSPIGILSKIQKIGSHLGHGREEDAHEFLRCAVDTMQSVCLKEFGAKGKIAEETTLIGLT 84
             + P  ++ ++++IG H   G +EDAHEFLR  VD MQ  CL       + ++ TT+I   
Sbjct:   169 IKPAFVVHELKRIGKHFRFGAQEDAHEFLRFTVDAMQQACLHGCTILDRSSQATTIIHQI 228

Query:    85 FGGYLRSKIKCLKCLGKSELYERMMDLTVEIDGDIGTLEEALAQFTASEILVGENKYYCS 144
             FGG+LRS++KCL C   S+ YE  +D+ ++I   + ++ +AL QF   E L GEN Y CS
Sbjct:   229 FGGFLRSRVKCLNCKAVSDTYEAFLDIPLDIK-TVSSVTKALEQFVKPEQLDGENCYKCS 287

Query:   145 RCKSYEKAKKKLTVLEEPNILTIVLKRFESGNFGKLNKSVWFPEVLNMAPYMSRTGDGSP 204
             +CK    A K+ T+    N+LTI LKRF +   GK+NK V +PE L++  YMS++  G P
Sbjct:   288 KCKKMVPASKRFTIHRSSNVLTISLKRFANFTGGKINKEVKYPEYLDLRAYMSQS-IGEP 346

Query:   205 M-YSLYAVVVHLDVTNATFSGHYVCYVKNSHEEWFRIDDSTVIPVKLERVLSEEAYMLLY 263
             + Y+LYAV+VH  V +   +GHY C++K +   W++++D++V+   ++ VL ++AY+L Y
Sbjct:   347 LIYALYAVLVHSGVNS--HAGHYFCFIKAADGLWYQMNDASVVQSNIKTVLGQQAYLLFY 404

Query:   264 AR 265
              R
Sbjct:   405 IR 406

 Score = 40 (19.1 bits), Expect = 2.9e-48, Sum P(2) = 2.9e-48
 Identities = 11/31 (35%), Positives = 16/31 (51%)

Query:   275 RNNVSHGVKSKKKNLEAVDLNNTSKIRSNSY 305
             +   S  V++ K+N    D  N +K RS SY
Sbjct:   951 KRRCSRSVETNKQNRRKQDYCNGNKYRS-SY 980

 Score = 38 (18.4 bits), Expect = 4.7e-48, Sum P(2) = 4.7e-48
 Identities = 11/42 (26%), Positives = 19/42 (45%)

Query:   434 ESTKQYRNLGHQYVSNGSSRDIDSDRVGWANPSDVRLRRANG 475
             +S     +L ++   NG   D  S +V    PS++   + NG
Sbjct:   640 DSLNGANSLDNEPKENGLKLDDSSCQVPPVKPSEMLFPKTNG 681


>UNIPROTKB|E7EWZ4 [details] [associations]
            symbol:USP42 "Ubiquitin carboxyl-terminal hydrolase 42"
            species:9606 "Homo sapiens" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00973 PROSITE:PS50235
            GO:GO:0006511 GO:GO:0004221 EMBL:AC004895 HGNC:HGNC:20068
            IPI:IPI01011330 ProteinModelPortal:E7EWZ4 SMR:E7EWZ4
            Ensembl:ENST00000465073 ArrayExpress:E7EWZ4 Bgee:E7EWZ4
            Uniprot:E7EWZ4
        Length = 475

 Score = 503 (182.1 bits), Expect = 3.7e-48, P = 3.7e-48
 Identities = 100/242 (41%), Positives = 150/242 (61%)

Query:    25 VSPIGILSKIQKIGSHLGHGREEDAHEFLRCAVDTMQSVCLKEFGAKGKIAEETTLIGLT 84
             + P+ +++++++I  H   G +EDAHEFL+  VD MQ  CL       +  + TTL+   
Sbjct:   107 IKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACLNGSNKLDRHTQATTLVCQI 166

Query:    85 FGGYLRSKIKCLKCLGKSELYERMMDLTVEIDGDIGTLEEALAQFTASEILVGENKYYCS 144
             FGGYLRS++KCL C G S+ ++  +D+T+EI     ++ +AL QF   E L GEN Y CS
Sbjct:   167 FGGYLRSRVKCLNCKGVSDTFDPYLDITLEIKA-AQSVNKALEQFVKPEQLDGENSYKCS 225

Query:   145 RCKSYEKAKKKLTVLEEPNILTIVLKRFESGNFGKLNKSVWFPEVLNMAPYMSRTGDGSP 204
             +CK    A K+ T+    N+LT+ LKRF +   GK+ K V +PE L++ PYMS+  +G P
Sbjct:   226 KCKKMVPASKRFTIHRSSNVLTLSLKRFANFTGGKIAKDVKYPEYLDIRPYMSQP-NGEP 284

Query:   205 M-YSLYAVVVHLDVTNATFSGHYVCYVKNSHEEWFRIDDSTVIPVKLERVLSEEAYMLLY 263
             + Y LYAV+VH        +GHY CY+K S+  W++++DS V    +  VLS++AY+L Y
Sbjct:   285 IVYVLYAVLVHTGFN--CHAGHYFCYIKASNGLWYQMNDSIVSTSDIRSVLSQQAYVLFY 342

Query:   264 AR 265
              R
Sbjct:   343 IR 344


>RGD|1309937 [details] [associations]
            symbol:Usp36 "ubiquitin specific peptidase 36" species:10116
            "Rattus norvegicus" [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=IEA] [GO:0005730 "nucleolus" evidence=ISO] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA]
            [GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
            InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 RGD:1309937 GO:GO:0008234
            GO:GO:0006511 GO:GO:0004221 OrthoDB:EOG4V9TQ1
            GeneTree:ENSGT00670000097591 IPI:IPI00947986
            Ensembl:ENSRNOT00000064450 UCSC:RGD:1309937 ArrayExpress:D3ZNQ4
            Uniprot:D3ZNQ4
        Length = 1005

 Score = 511 (184.9 bits), Expect = 4.9e-48, P = 4.9e-48
 Identities = 99/248 (39%), Positives = 149/248 (60%)

Query:    18 AKDGSYPVSPIGILSKIQKIGSHLGHGREEDAHEFLRCAVDTMQSVCLKEFGAKGKIAEE 77
             A  G+  + P+  +  ++KI  H   G +EDAHEFLR  +D MQ  CL  +    +  + 
Sbjct:   179 ANSGN-AIKPVSFIRDLKKIARHFRFGNQEDAHEFLRYTIDAMQKACLNGYAKLDRQTQA 237

Query:    78 TTLIGLTFGGYLRSKIKCLKCLGKSELYERMMDLTVEIDGDIGTLEEALAQFTASEILVG 137
             TTL+   FGGYLRS++KC  C   S+ Y+  +D+ +EI      +  AL  F  S++L G
Sbjct:   238 TTLVHQIFGGYLRSRVKCSVCRSVSDTYDPYLDIALEIR-QAANIVRALELFVKSDVLSG 296

Query:   138 ENKYYCSRCKSYEKAKKKLTVLEEPNILTIVLKRFESGNFGKLNKSVWFPEVLNMAPYMS 197
             EN Y C++CK    A K+ ++    N+LT+ LKRF + + GK+ K V +PE LN+ PYMS
Sbjct:   297 ENAYMCAKCKKKVPASKRFSIHRTSNVLTLSLKRFANFSGGKITKDVGYPEFLNIRPYMS 356

Query:   198 RTGDGSPMYSLYAVVVHLDVTNATFSGHYVCYVKNSHEEWFRIDDSTVIPVKLERVLSEE 257
             ++     MY LYAV+VH   +    +GHY CYVK S+ +W++++DS V    ++ VLS++
Sbjct:   357 QSSGDPVMYGLYAVLVHSGYS--CHAGHYYCYVKASNGQWYQMNDSLVHSSNVKVVLSQQ 414

Query:   258 AYMLLYAR 265
             AY+L Y R
Sbjct:   415 AYVLFYLR 422


>UNIPROTKB|E2RHU7 [details] [associations]
            symbol:USP42 "Ubiquitin carboxyl-terminal hydrolase"
            species:9615 "Canis lupus familiaris" [GO:0008234 "cysteine-type
            peptidase activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent
            protein catabolic process" evidence=IEA] [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 GO:GO:0008234 GO:GO:0006511 GO:GO:0004221 KO:K11855
            GeneTree:ENSGT00670000097591 OMA:ALHSENP CTD:84132
            EMBL:AAEX03004287 RefSeq:XP_536882.2 Ensembl:ENSCAFT00000024838
            GeneID:479754 KEGG:cfa:479754 Uniprot:E2RHU7
        Length = 1331

 Score = 512 (185.3 bits), Expect = 7.8e-48, P = 7.8e-48
 Identities = 113/297 (38%), Positives = 172/297 (57%)

Query:    25 VSPIGILSKIQKIGSHLGHGREEDAHEFLRCAVDTMQSVCLKEFGAKGKIAEETTLIGLT 84
             + P+ +++++++I  H   G +EDAHEFL+  VD MQ  CL       +  + TTL+   
Sbjct:   174 IKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACLNGSNKLDRHTQATTLVCQI 233

Query:    85 FGGYLRSKIKCLKCLGKSELYERMMDLTVEIDGDIGTLEEALAQFTASEILVGENKYYCS 144
             FGGYLRS++KCL C G S+ ++  +D+T+EI     ++ +AL QF   E L GEN Y CS
Sbjct:   234 FGGYLRSRVKCLNCKGVSDTFDPYLDITLEIKA-AQSVNKALEQFVKPEQLDGENSYKCS 292

Query:   145 RCKSYEKAKKKLTVLEEPNILTIVLKRFESGNFGKLNKSVWFPEVLNMAPYMSRTGDGSP 204
             +CK    A K+ T+    N+LT+ LKRF +   GK+ K V +PE L++ PYMS+  +G P
Sbjct:   293 KCKKMVPASKRFTIHRSSNVLTLSLKRFANFTGGKIAKDVKYPEYLDIRPYMSQP-NGEP 351

Query:   205 M-YSLYAVVVHLDVTNATFSGHYVCYVKNSHEEWFRIDDSTVIPVKLERVLSEEAYMLLY 263
             + Y LYAV+VH        +GHY CY+K S+  W++++DS V    +  VLS++AY+L Y
Sbjct:   352 IIYVLYAVLVHTGFN--CHAGHYFCYIKASNGLWYQMNDSIVSTSDIRSVLSQQAYVLFY 409

Query:   264 AR-HSPRPPA-LIRNNVSHGVKSKKKNLEAVDLNNTSKIRSNSYI-PSLDSKAQQKP 317
              R H  +    L  +  S G  S +  +    +NN  K  ++ +I P L S   + P
Sbjct:   410 IRSHDVKNGGELTHSTHSPGQSSPRPVISQRVVNN--KQAASGFIGPQLPSHMIKNP 464


>UNIPROTKB|E1B9W9 [details] [associations]
            symbol:USP42 "Ubiquitin carboxyl-terminal hydrolase 42"
            species:9913 "Bos taurus" [GO:0016579 "protein deubiquitination"
            evidence=ISS] [GO:0030154 "cell differentiation" evidence=IEA]
            [GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
            [GO:0007283 "spermatogenesis" evidence=IEA] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA]
            [GO:0004221 "ubiquitin thiolesterase activity" evidence=IEA]
            InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 GO:GO:0030154 GO:GO:0008234
            GO:GO:0007283 GO:GO:0006511 GO:GO:0016579 GO:GO:0004221
            GeneTree:ENSGT00670000097591 EMBL:AAFC03050082 IPI:IPI00711714
            UniGene:Bt.42050 Ensembl:ENSBTAT00000000967 OMA:ALHSENP
            Uniprot:E1B9W9
        Length = 1333

 Score = 512 (185.3 bits), Expect = 7.8e-48, P = 7.8e-48
 Identities = 112/297 (37%), Positives = 173/297 (58%)

Query:    25 VSPIGILSKIQKIGSHLGHGREEDAHEFLRCAVDTMQSVCLKEFGAKGKIAEETTLIGLT 84
             + P+ +++++++I  H   G +EDAHEFL+  VD MQ  CL       +  + TTL+   
Sbjct:   174 IKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACLNGSNKLDRHTQATTLVCQI 233

Query:    85 FGGYLRSKIKCLKCLGKSELYERMMDLTVEIDGDIGTLEEALAQFTASEILVGENKYYCS 144
             FGGYLRS++KCL C G S+ ++  +D+T+EI     ++ +AL QF   E L GEN Y CS
Sbjct:   234 FGGYLRSRVKCLNCKGVSDTFDPYLDITLEIKA-AQSVNKALEQFVKPEQLDGENSYKCS 292

Query:   145 RCKSYEKAKKKLTVLEEPNILTIVLKRFESGNFGKLNKSVWFPEVLNMAPYMSRTGDGSP 204
             +CK    A K+ T+    N+LT+ LKRF +   GK+ K V +PE L++ PYMS+  +G P
Sbjct:   293 KCKKMVPASKRFTIHRSSNVLTLSLKRFANFTGGKIAKDVKYPEYLDIRPYMSQP-NGEP 351

Query:   205 M-YSLYAVVVHLDVTNATFSGHYVCYVKNSHEEWFRIDDSTVIPVKLERVLSEEAYMLLY 263
             + Y LYAV+VH        +GHY CY+K S+  W++++DS V    +  VLS++AY+L Y
Sbjct:   352 IIYVLYAVLVHTGFN--CHAGHYFCYIKASNGLWYQMNDSIVSTSDIRSVLSQQAYVLFY 409

Query:   264 AR-HSPRPPALIRNNV-SHGVKSKKKNLEAVDLNNTSKIRSNSYI-PSLDSKAQQKP 317
              R H  +    + ++  S G  S +  +    +N  SK  ++ +I P L S   + P
Sbjct:   410 IRSHDVKNGGELTHSAHSPGQSSPRPVISQRVVN--SKQAASGFIGPQLPSHMMKNP 464


>UNIPROTKB|E2RKV1 [details] [associations]
            symbol:USP36 "Ubiquitin carboxyl-terminal hydrolase"
            species:9615 "Canis lupus familiaris" [GO:0005730 "nucleolus"
            evidence=IEA] [GO:0008234 "cysteine-type peptidase activity"
            evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
            process" evidence=IEA] [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] InterPro:IPR001394 InterPro:IPR018200
            Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235
            GO:GO:0005730 GO:GO:0008234 GO:GO:0006511 GO:GO:0004221 OMA:VTHPAKA
            GeneTree:ENSGT00670000097591 EMBL:AAEX03006230 EMBL:AAEX03006231
            ProteinModelPortal:E2RKV1 Ensembl:ENSCAFT00000008904 Uniprot:E2RKV1
        Length = 1117

 Score = 506 (183.2 bits), Expect = 2.3e-47, P = 2.3e-47
 Identities = 103/257 (40%), Positives = 153/257 (59%)

Query:    18 AKDGSYPVSPIGILSKIQKIGSHLGHGREEDAHEFLRCAVDTMQSVCLKEFGAKGKIAEE 77
             A  G+  + P+  +  ++KI  H   G +EDAHEFLR  +D MQ  CL       +  + 
Sbjct:   179 ANSGN-AIKPVSFIRDLKKIARHFRFGNQEDAHEFLRYTIDAMQKACLNGCAKLDRQTQA 237

Query:    78 TTLIGLTFGGYLRSKIKCLKCLGKSELYERMMDLTVEIDGDIGTLEEALAQFTASEILVG 137
             TTL+   FGGYLRS++KC  C   S+ Y+  +D+ +EI      +  AL  F   ++L G
Sbjct:   238 TTLVHQIFGGYLRSRVKCSVCKSVSDTYDPYLDVALEIR-QAANIVRALELFVKPDVLSG 296

Query:   138 ENKYYCSRCKSYEKAKKKLTVLEEPNILTIVLKRFESGNFGKLNKSVWFPEVLNMAPYMS 197
             EN Y C++CK    A K+ T+    N+LT+ LKRF + + GK+ K V +PE LN+ PYMS
Sbjct:   297 ENAYMCAKCKKKVPASKRFTIHRTSNVLTLSLKRFANFSGGKITKDVGYPEFLNIRPYMS 356

Query:   198 RTGDGSP-MYSLYAVVVHLDVTNATFSGHYVCYVKNSHEEWFRIDDSTVIPVKLERVLSE 256
             ++ +G P MY LYAV+VH   +    +GHY CYVK S+ +W++++DS V    ++ VL++
Sbjct:   357 QS-NGEPVMYGLYAVLVHSGYS--CHAGHYYCYVKASNGQWYQMNDSLVHSSNIKVVLNQ 413

Query:   257 EAYMLLYAR--HSPRPP 271
             +AY+L Y R   S R P
Sbjct:   414 QAYLLFYLRIPSSKRSP 430


>UNIPROTKB|C9JPC9 [details] [associations]
            symbol:USP42 "Ubiquitin carboxyl-terminal hydrolase 42"
            species:9606 "Homo sapiens" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0016579 "protein
            deubiquitination" evidence=IEA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00973 PROSITE:PS50235
            GO:GO:0006511 GO:GO:0016579 GO:GO:0004221 EMBL:AC004895
            HGNC:HGNC:20068 IPI:IPI00976770 ProteinModelPortal:C9JPC9
            SMR:C9JPC9 STRING:C9JPC9 Ensembl:ENST00000426246
            HOGENOM:HOG000203246 ArrayExpress:C9JPC9 Bgee:C9JPC9 Uniprot:C9JPC9
        Length = 1044

 Score = 503 (182.1 bits), Expect = 4.0e-47, P = 4.0e-47
 Identities = 100/242 (41%), Positives = 150/242 (61%)

Query:    25 VSPIGILSKIQKIGSHLGHGREEDAHEFLRCAVDTMQSVCLKEFGAKGKIAEETTLIGLT 84
             + P+ +++++++I  H   G +EDAHEFL+  VD MQ  CL       +  + TTL+   
Sbjct:    20 IKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACLNGSNKLDRHTQATTLVCQI 79

Query:    85 FGGYLRSKIKCLKCLGKSELYERMMDLTVEIDGDIGTLEEALAQFTASEILVGENKYYCS 144
             FGGYLRS++KCL C G S+ ++  +D+T+EI     ++ +AL QF   E L GEN Y CS
Sbjct:    80 FGGYLRSRVKCLNCKGVSDTFDPYLDITLEIKA-AQSVNKALEQFVKPEQLDGENSYKCS 138

Query:   145 RCKSYEKAKKKLTVLEEPNILTIVLKRFESGNFGKLNKSVWFPEVLNMAPYMSRTGDGSP 204
             +CK    A K+ T+    N+LT+ LKRF +   GK+ K V +PE L++ PYMS+  +G P
Sbjct:   139 KCKKMVPASKRFTIHRSSNVLTLSLKRFANFTGGKIAKDVKYPEYLDIRPYMSQP-NGEP 197

Query:   205 M-YSLYAVVVHLDVTNATFSGHYVCYVKNSHEEWFRIDDSTVIPVKLERVLSEEAYMLLY 263
             + Y LYAV+VH        +GHY CY+K S+  W++++DS V    +  VLS++AY+L Y
Sbjct:   198 IVYVLYAVLVHTGFN--CHAGHYFCYIKASNGLWYQMNDSIVSTSDIRSVLSQQAYVLFY 255

Query:   264 AR 265
              R
Sbjct:   256 IR 257


>UNIPROTKB|E1BGW4 [details] [associations]
            symbol:USP36 "Ubiquitin carboxyl-terminal hydrolase"
            species:9913 "Bos taurus" [GO:0005730 "nucleolus" evidence=IEA]
            [GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
            [GO:0006511 "ubiquitin-dependent protein catabolic process"
            evidence=IEA] [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=IEA] InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443
            PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 GO:GO:0005730
            GO:GO:0008234 GO:GO:0006511 GO:GO:0004221 KO:K11855 CTD:57602
            OMA:VTHPAKA GeneTree:ENSGT00670000097591 EMBL:DAAA02049470
            EMBL:DAAA02049471 IPI:IPI01000591 RefSeq:XP_002696201.1
            UniGene:Bt.42165 Ensembl:ENSBTAT00000028663 GeneID:504581
            KEGG:bta:504581 NextBio:20866734 Uniprot:E1BGW4
        Length = 1101

 Score = 503 (182.1 bits), Expect = 4.6e-47, P = 4.6e-47
 Identities = 100/249 (40%), Positives = 149/249 (59%)

Query:    18 AKDGSYPVSPIGILSKIQKIGSHLGHGREEDAHEFLRCAVDTMQSVCLKEFGAKGKIAEE 77
             A  G+  + P+  +  ++KI  H   G +EDAHEFLR  +D MQ  CL       +  + 
Sbjct:   179 ANSGN-AIKPVSFIRDLRKIARHFRFGNQEDAHEFLRYTIDAMQKACLSGCAKLDRQTQA 237

Query:    78 TTLIGLTFGGYLRSKIKCLKCLGKSELYERMMDLTVEIDGDIGTLEEALAQFTASEILVG 137
             TTL+   FGGYLRS++KC  C   S+ Y+  +D+ +EI      +  AL  F   ++L G
Sbjct:   238 TTLVHQIFGGYLRSRVKCSMCKSVSDTYDPYLDVALEIR-QAANIVRALELFVKPDVLSG 296

Query:   138 ENKYYCSRCKSYEKAKKKLTVLEEPNILTIVLKRFESGNFGKLNKSVWFPEVLNMAPYMS 197
             EN Y C++CK    A K+ T+    N+LT+ LKRF + + GK+ K V +PE LN+ PYMS
Sbjct:   297 ENAYMCAKCKKKVPASKRFTIHRTSNVLTLSLKRFANFSGGKITKDVGYPEFLNIRPYMS 356

Query:   198 RTGDGSP-MYSLYAVVVHLDVTNATFSGHYVCYVKNSHEEWFRIDDSTVIPVKLERVLSE 256
             ++  G P MY LYAV+VH   +    +GHY CYVK S+ +W++++DS V    ++ VL++
Sbjct:   357 QSS-GEPVMYGLYAVLVHSGYS--CHAGHYYCYVKASNGQWYQMNDSLVHASNIKVVLNQ 413

Query:   257 EAYMLLYAR 265
             +AY+L Y R
Sbjct:   414 QAYVLFYLR 422


>UNIPROTKB|Q9P275 [details] [associations]
            symbol:USP36 "Ubiquitin carboxyl-terminal hydrolase 36"
            species:9606 "Homo sapiens" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0008234 "cysteine-type
            peptidase activity" evidence=IEA] [GO:0005730 "nucleolus"
            evidence=IDA] InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443
            PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 GO:GO:0005730
            GO:GO:0008234 GO:GO:0006511 GO:GO:0004221 eggNOG:COG5533 KO:K11855
            EMBL:AB040886 EMBL:BC016487 EMBL:BC027992 EMBL:BC071582
            EMBL:AK001671 EMBL:AL833835 IPI:IPI00001786 IPI:IPI00843790
            RefSeq:NP_079366.3 UniGene:Hs.464243 ProteinModelPortal:Q9P275
            SMR:Q9P275 IntAct:Q9P275 STRING:Q9P275 MEROPS:C19.042
            PhosphoSite:Q9P275 DMDM:124056592 SWISS-2DPAGE:Q9P275 PaxDb:Q9P275
            PeptideAtlas:Q9P275 PRIDE:Q9P275 Ensembl:ENST00000312010
            Ensembl:ENST00000542802 GeneID:57602 KEGG:hsa:57602 UCSC:uc002jvz.1
            UCSC:uc002jwc.1 CTD:57602 GeneCards:GC17M076792 H-InvDB:HIX0014226
            HGNC:HGNC:20062 HPA:HPA012082 MIM:612543 neXtProt:NX_Q9P275
            PharmGKB:PA134949090 HOGENOM:HOG000154759 HOVERGEN:HBG061810
            InParanoid:Q9P275 OMA:VTHPAKA OrthoDB:EOG4V9TQ1 GenomeRNAi:57602
            NextBio:64221 PMAP-CutDB:Q9P275 ArrayExpress:Q9P275 Bgee:Q9P275
            CleanEx:HS_USP36 Genevestigator:Q9P275 GermOnline:ENSG00000055483
            Uniprot:Q9P275
        Length = 1121

 Score = 503 (182.1 bits), Expect = 4.8e-47, P = 4.8e-47
 Identities = 100/249 (40%), Positives = 150/249 (60%)

Query:    18 AKDGSYPVSPIGILSKIQKIGSHLGHGREEDAHEFLRCAVDTMQSVCLKEFGAKGKIAEE 77
             A  G+  + P+  +  ++KI  H   G +EDAHEFLR  +D MQ  CL       +  + 
Sbjct:   179 ANSGN-AIKPVSFIRDLKKIARHFRFGNQEDAHEFLRYTIDAMQKACLNGCAKLDRQTQA 237

Query:    78 TTLIGLTFGGYLRSKIKCLKCLGKSELYERMMDLTVEIDGDIGTLEEALAQFTASEILVG 137
             TTL+   FGGYLRS++KC  C   S+ Y+  +D+ +EI      +  AL  F  +++L G
Sbjct:   238 TTLVHQIFGGYLRSRVKCSVCKSVSDTYDPYLDVALEIR-QAANIVRALELFVKADVLSG 296

Query:   138 ENKYYCSRCKSYEKAKKKLTVLEEPNILTIVLKRFESGNFGKLNKSVWFPEVLNMAPYMS 197
             EN Y C++CK    A K+ T+    N+LT+ LKRF + + GK+ K V +PE LN+ PYMS
Sbjct:   297 ENAYMCAKCKKKVPASKRFTIHRTSNVLTLSLKRFANFSGGKITKDVGYPEFLNIRPYMS 356

Query:   198 RTGDGSP-MYSLYAVVVHLDVTNATFSGHYVCYVKNSHEEWFRIDDSTVIPVKLERVLSE 256
             +  +G P MY LYAV+VH   +    +GHY CYVK S+ +W++++DS V    ++ VL++
Sbjct:   357 QN-NGDPVMYGLYAVLVHSGYS--CHAGHYYCYVKASNGQWYQMNDSLVHSSNVKVVLNQ 413

Query:   257 EAYMLLYAR 265
             +AY+L Y R
Sbjct:   414 QAYVLFYLR 422


>UNIPROTKB|Q9H9J4 [details] [associations]
            symbol:USP42 "Ubiquitin carboxyl-terminal hydrolase 42"
            species:9606 "Homo sapiens" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0007283 "spermatogenesis"
            evidence=IEA] [GO:0008234 "cysteine-type peptidase activity"
            evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
            [GO:0016579 "protein deubiquitination" evidence=ISS]
            InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 GO:GO:0030154 GO:GO:0008234
            GO:GO:0007283 GO:GO:0006511 GO:GO:0016579 GO:GO:0004221
            eggNOG:COG5533 KO:K11855 OMA:ALHSENP EMBL:AJ601395 EMBL:AY618868
            EMBL:AC004895 EMBL:BC060846 EMBL:BC132862 EMBL:AK022759
            IPI:IPI00784612 IPI:IPI01009873 RefSeq:NP_115548.1 UniGene:Hs.31856
            ProteinModelPortal:Q9H9J4 SMR:Q9H9J4 IntAct:Q9H9J4 STRING:Q9H9J4
            MEROPS:C19.048 PhosphoSite:Q9H9J4 DMDM:85681903 PaxDb:Q9H9J4
            PRIDE:Q9H9J4 Ensembl:ENST00000306177 GeneID:84132 KEGG:hsa:84132
            UCSC:uc011jwo.1 UCSC:uc011jwp.2 CTD:84132 GeneCards:GC07P006144
            H-InvDB:HIX0006462 HGNC:HGNC:20068 HPA:HPA006752 neXtProt:NX_Q9H9J4
            PharmGKB:PA134902515 HOGENOM:HOG000236355 HOVERGEN:HBG080724
            InParanoid:Q9H9J4 OrthoDB:EOG4RV2RB GenomeRNAi:84132 NextBio:73425
            PMAP-CutDB:Q9H9J4 ArrayExpress:Q9H9J4 Bgee:Q9H9J4 CleanEx:HS_USP42
            Genevestigator:Q9H9J4 GermOnline:ENSG00000106346 Uniprot:Q9H9J4
        Length = 1324

 Score = 503 (182.1 bits), Expect = 7.1e-47, P = 7.1e-47
 Identities = 100/242 (41%), Positives = 150/242 (61%)

Query:    25 VSPIGILSKIQKIGSHLGHGREEDAHEFLRCAVDTMQSVCLKEFGAKGKIAEETTLIGLT 84
             + P+ +++++++I  H   G +EDAHEFL+  VD MQ  CL       +  + TTL+   
Sbjct:   174 IKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACLNGSNKLDRHTQATTLVCQI 233

Query:    85 FGGYLRSKIKCLKCLGKSELYERMMDLTVEIDGDIGTLEEALAQFTASEILVGENKYYCS 144
             FGGYLRS++KCL C G S+ ++  +D+T+EI     ++ +AL QF   E L GEN Y CS
Sbjct:   234 FGGYLRSRVKCLNCKGVSDTFDPYLDITLEIKA-AQSVNKALEQFVKPEQLDGENSYKCS 292

Query:   145 RCKSYEKAKKKLTVLEEPNILTIVLKRFESGNFGKLNKSVWFPEVLNMAPYMSRTGDGSP 204
             +CK    A K+ T+    N+LT+ LKRF +   GK+ K V +PE L++ PYMS+  +G P
Sbjct:   293 KCKKMVPASKRFTIHRSSNVLTLSLKRFANFTGGKIAKDVKYPEYLDIRPYMSQP-NGEP 351

Query:   205 M-YSLYAVVVHLDVTNATFSGHYVCYVKNSHEEWFRIDDSTVIPVKLERVLSEEAYMLLY 263
             + Y LYAV+VH        +GHY CY+K S+  W++++DS V    +  VLS++AY+L Y
Sbjct:   352 IVYVLYAVLVHTGFN--CHAGHYFCYIKASNGLWYQMNDSIVSTSDIRSVLSQQAYVLFY 409

Query:   264 AR 265
              R
Sbjct:   410 IR 411


>UNIPROTKB|F1RZ74 [details] [associations]
            symbol:USP36 "Ubiquitin carboxyl-terminal hydrolase"
            species:9823 "Sus scrofa" [GO:0005730 "nucleolus" evidence=IEA]
            [GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
            [GO:0006511 "ubiquitin-dependent protein catabolic process"
            evidence=IEA] [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=IEA] InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443
            PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 GO:GO:0005730
            GO:GO:0008234 GO:GO:0006511 GO:GO:0004221 OMA:VTHPAKA
            GeneTree:ENSGT00670000097591 EMBL:CU942393
            Ensembl:ENSSSCT00000018689 Uniprot:F1RZ74
        Length = 1121

 Score = 501 (181.4 bits), Expect = 7.9e-47, P = 7.9e-47
 Identities = 109/301 (36%), Positives = 167/301 (55%)

Query:    18 AKDGSYPVSPIGILSKIQKIGSHLGHGREEDAHEFLRCAVDTMQSVCLKEFGAKGKIAEE 77
             A  G+  + P+  +  ++KI  H   G +EDAHEFLR  +D MQ  CL       +  + 
Sbjct:   185 ANSGN-AIKPVSFIRDLRKIARHFRFGNQEDAHEFLRYTIDAMQKACLSGCAKLDRQTQA 243

Query:    78 TTLIGLTFGGYLRSKIKCLKCLGKSELYERMMDLTVEIDGDIGTLEEALAQFTASEILVG 137
             TTL+   FGGYLRS++KC  C   S+ Y+  +D+ +EI      +  AL  F   ++L G
Sbjct:   244 TTLVHQIFGGYLRSRVKCSVCKSVSDTYDPYLDVALEIR-QAANIVRALELFVKPDVLSG 302

Query:   138 ENKYYCSRCKSYEKAKKKLTVLEEPNILTIVLKRFESGNFGKLNKSVWFPEVLNMAPYMS 197
             EN Y C++CK    A K+ T+    N+LT+ LKRF + + GK+ K V +PE LN+ PYMS
Sbjct:   303 ENAYMCAKCKKKVPASKRFTIHRTSNVLTLSLKRFANFSGGKITKEVGYPEFLNIRPYMS 362

Query:   198 RTGDGSP-MYSLYAVVVHLDVTNATFSGHYVCYVKNSHEEWFRIDDSTVIPVKLERVLSE 256
             ++ +G P +Y LYAV+VH   +    +GHY CYVK S  +W++++DS V    ++ VL++
Sbjct:   363 QS-NGEPVLYGLYAVLVHSGYS--CHAGHYYCYVKASSGQWYQMNDSLVHASNIKVVLNQ 419

Query:   257 EAYMLLYARHSPRPPALIRNNVSHGVKSKKKNLEAVDLNNTSKIRSNSYIPSLDSKAQQK 316
             +AY+L Y R  P      + ++S    S         L++  K  SN   P+    A ++
Sbjct:   420 QAYVLFYLR-IPGSKKSPQGSISR-TASSLPGCPGAALDHVKKSVSNG--PASSPPAGKR 475

Query:   317 P 317
             P
Sbjct:   476 P 476


>RGD|1305231 [details] [associations]
            symbol:Usp42 "ubiquitin specific peptidase 42" species:10116
            "Rattus norvegicus" [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=IEA] [GO:0004843 "ubiquitin-specific protease activity"
            evidence=ISO] [GO:0006511 "ubiquitin-dependent protein catabolic
            process" evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IEA]
            [GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
            [GO:0016579 "protein deubiquitination" evidence=ISO;ISS]
            [GO:0030154 "cell differentiation" evidence=IEA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 RGD:1305231 GO:GO:0030154 GO:GO:0008234
            GO:GO:0007283 GO:GO:0006511 EMBL:CH474012 GO:GO:0016579
            GO:GO:0004221 KO:K11855 GeneTree:ENSGT00670000097591 CTD:84132
            OrthoDB:EOG4RV2RB IPI:IPI00769124 RefSeq:NP_001099379.1
            UniGene:Rn.25011 Ensembl:ENSRNOT00000001404 GeneID:288482
            KEGG:rno:288482 NextBio:628152 Uniprot:D3ZU96
        Length = 1325

 Score = 501 (181.4 bits), Expect = 1.2e-46, P = 1.2e-46
 Identities = 100/242 (41%), Positives = 150/242 (61%)

Query:    25 VSPIGILSKIQKIGSHLGHGREEDAHEFLRCAVDTMQSVCLKEFGAKGKIAEETTLIGLT 84
             + P+ +++++++I  H   G +EDAHEFL+  VD MQ  CL       +  + TTL+   
Sbjct:   173 IKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACLNGSNKLDRHTQATTLVCQI 232

Query:    85 FGGYLRSKIKCLKCLGKSELYERMMDLTVEIDGDIGTLEEALAQFTASEILVGENKYYCS 144
             FGGYLRS++KCL C G S+ ++  +D+T+EI     ++ +AL QF   E L GEN Y CS
Sbjct:   233 FGGYLRSRVKCLNCKGVSDTFDPYLDITLEIKA-AQSVTKALEQFVKPEQLDGENSYKCS 291

Query:   145 RCKSYEKAKKKLTVLEEPNILTIVLKRFESGNFGKLNKSVWFPEVLNMAPYMSRTGDGSP 204
             +CK    A K+ T+    N+LTI LKRF +   GK+ K V +PE L++ PYMS+  +G P
Sbjct:   292 KCKKMVPASKRFTIHRSSNVLTISLKRFANFTGGKIAKDVKYPEYLDIRPYMSQP-NGEP 350

Query:   205 M-YSLYAVVVHLDVTNATFSGHYVCYVKNSHEEWFRIDDSTVIPVKLERVLSEEAYMLLY 263
             + Y LYAV+VH        +GHY CY+K S+  W++++DS V    +  VL+++AY+L Y
Sbjct:   351 IIYVLYAVLVHTGFN--CHAGHYFCYIKASNGLWYQMNDSIVSTSDIRSVLNQQAYVLFY 408

Query:   264 AR 265
              R
Sbjct:   409 IR 410


>UNIPROTKB|C9JPN9 [details] [associations]
            symbol:USP17L12 "Ubiquitin carboxyl-terminal hydrolase
            17-like protein 12" species:9606 "Homo sapiens" [GO:0004221
            "ubiquitin thiolesterase activity" evidence=IEA] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA]
            [GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0005783 "endoplasmic
            reticulum" evidence=IEA] InterPro:IPR001394 InterPro:IPR018200
            Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235
            Pfam:PF04774 GO:GO:0008234 GO:GO:0006511 GO:GO:0004221
            InterPro:IPR006861 HOGENOM:HOG000144638 OrthoDB:EOG42V8G0
            EMBL:AC108519 IPI:IPI00935524 RefSeq:NP_001243782.1
            UniGene:Hs.741128 ProteinModelPortal:C9JPN9 SMR:C9JPN9
            STRING:C9JPN9 Ensembl:ENST00000415041 GeneID:100287205
            KEGG:hsa:100287205 CTD:100287205 GeneCards:GC04P009225
            HGNC:HGNC:44440 GenomeRNAi:100287205 NextBio:20776956
            Uniprot:C9JPN9
        Length = 530

 Score = 456 (165.6 bits), Expect = 3.5e-43, P = 3.5e-43
 Identities = 109/315 (34%), Positives = 165/315 (52%)

Query:    26 SPIGILSKIQKIGSHLGHGREEDAHEFLRCAVDTMQSVCLKEFGAKGKIAEETTLIGLTF 85
             +P  ++   Q + +    G++EDAHEFL   VD M+  CL         +++TTLI   F
Sbjct:   138 NPGHVIQPSQALAAGFHRGKQEDAHEFLMFTVDAMKKACLPGHKQVDHHSKDTTLIHQIF 197

Query:    86 GGYLRSKIKCLKCLGKSELYERMMDLTVEIDGDIGTLEEALAQFTASEILVGENKYYCSR 145
             GGY RS+IKCL C G S+ ++  +D+ ++I     ++++AL Q    E L GEN Y+C  
Sbjct:   198 GGYWRSQIKCLHCHGISDTFDPYLDIALDIQA-AQSVQQALEQLVKPEELNGENAYHCGV 256

Query:   146 CKSYEKAKKKLTVLEEPNILTIVLKRFESGNFGKLNKSVWFPEVLNMAPYMSRTGDGSPM 205
             C     A K LT+L    +L +VLKRF      K+ K+V +PE L+M PYMS+   G  +
Sbjct:   257 CLQRAPASKMLTLLTSAKVLILVLKRFSDVTGNKIAKNVQYPECLDMQPYMSQPNTGPLV 316

Query:   206 YSLYAVVVHLDVTNATFSGHYVCYVKNSHEEWFRIDDSTVIPVKLERVLSEEAYMLLYAR 265
             Y LYAV+VH   +    +GHY  YVK    +W+++DD+ V    +  VLS++AY+L Y +
Sbjct:   317 YVLYAVLVHAGWS--CHNGHYFSYVKAQEGQWYKMDDAEVTASSITSVLSQQAYVLFYIQ 374

Query:   266 HSPRPPALIRNNVSHGVKSKKKNLEAVDLNNTS-KIRSNS---YIPSLDSKAQQKPCTDS 321
              S         +VS G + +    E  D   T  +++ +      P LD    ++  T  
Sbjct:   375 KSEWERH--SESVSRGREPRALGAEDTDRRATQGELKRDHPCLQAPELDEHLVER-ATQE 431

Query:   322 NQLFDRDEWKFRSMQ 336
             + L   D WKF   Q
Sbjct:   432 STL---DHWKFLQEQ 443


>UNIPROTKB|D6R901 [details] [associations]
            symbol:USP17L21 "Ubiquitin carboxyl-terminal hydrolase
            17-like protein 21" species:9606 "Homo sapiens" [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA]
            [GO:0004221 "ubiquitin thiolesterase activity" evidence=IEA]
            [GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0005783 "endoplasmic
            reticulum" evidence=IEA] InterPro:IPR001394 InterPro:IPR018200
            Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235
            Pfam:PF04774 GO:GO:0008234 GO:GO:0006511 GO:GO:0004221
            InterPro:IPR006861 HOGENOM:HOG000144638 OrthoDB:EOG42V8G0
            EMBL:AC108519 IPI:IPI00936851 RefSeq:NP_001243791.1
            UniGene:Hs.741136 ProteinModelPortal:D6R901 SMR:D6R901
            Ensembl:ENST00000506414 GeneID:100287478 KEGG:hsa:100287478
            CTD:100287478 GeneCards:GC04P009264 HGNC:HGNC:44449 OMA:VICALRQ
            GenomeRNAi:100287478 NextBio:20777229 Uniprot:D6R901
        Length = 530

 Score = 456 (165.6 bits), Expect = 3.5e-43, P = 3.5e-43
 Identities = 109/315 (34%), Positives = 165/315 (52%)

Query:    26 SPIGILSKIQKIGSHLGHGREEDAHEFLRCAVDTMQSVCLKEFGAKGKIAEETTLIGLTF 85
             +P  ++   Q + +    G++EDAHEFL   VD M+  CL         +++TTLI   F
Sbjct:   138 NPGHVIQPSQALAAGFHRGKQEDAHEFLMFTVDAMKKACLPGHKQVDHHSKDTTLIHQIF 197

Query:    86 GGYLRSKIKCLKCLGKSELYERMMDLTVEIDGDIGTLEEALAQFTASEILVGENKYYCSR 145
             GGY RS+IKCL C G S+ ++  +D+ ++I     ++++AL Q    E L GEN Y+C  
Sbjct:   198 GGYWRSQIKCLHCHGISDTFDPYLDIALDIQA-AQSVQQALEQLVKPEELNGENAYHCGV 256

Query:   146 CKSYEKAKKKLTVLEEPNILTIVLKRFESGNFGKLNKSVWFPEVLNMAPYMSRTGDGSPM 205
             C     A K LT+L    +L +VLKRF      K+ K+V +PE L+M PYMS+   G  +
Sbjct:   257 CLQRAPASKMLTLLTSAKVLILVLKRFSDVTGNKIAKNVQYPECLDMQPYMSQPNTGPLV 316

Query:   206 YSLYAVVVHLDVTNATFSGHYVCYVKNSHEEWFRIDDSTVIPVKLERVLSEEAYMLLYAR 265
             Y LYAV+VH   +    +GHY  YVK    +W+++DD+ V    +  VLS++AY+L Y +
Sbjct:   317 YVLYAVLVHAGWS--CHNGHYFSYVKAQEGQWYKMDDAEVTASSITSVLSQQAYVLFYIQ 374

Query:   266 HSPRPPALIRNNVSHGVKSKKKNLEAVDLNNTS-KIRSNS---YIPSLDSKAQQKPCTDS 321
              S         +VS G + +    E  D   T  +++ +      P LD    ++  T  
Sbjct:   375 KSEWERH--SESVSRGREPRALGAEDTDRRATQGELKRDHPCLQAPELDEHLVER-ATQE 431

Query:   322 NQLFDRDEWKFRSMQ 336
             + L   D WKF   Q
Sbjct:   432 STL---DHWKFLQEQ 443


>UNIPROTKB|C9JVI0 [details] [associations]
            symbol:USP17L11 "Ubiquitin carboxyl-terminal hydrolase
            17-like protein 11" species:9606 "Homo sapiens" [GO:0004221
            "ubiquitin thiolesterase activity" evidence=IEA] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA]
            [GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0005783 "endoplasmic
            reticulum" evidence=IEA] InterPro:IPR001394 InterPro:IPR018200
            Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235
            Pfam:PF04774 GO:GO:0008234 GO:GO:0006511 GO:GO:0004221
            InterPro:IPR006861 HOGENOM:HOG000144638 OrthoDB:EOG42V8G0
            EMBL:AC108519 IPI:IPI00938219 RefSeq:NP_001243783.1
            UniGene:Hs.722783 ProteinModelPortal:C9JVI0 SMR:C9JVI0
            STRING:C9JVI0 Ensembl:ENST00000457736 GeneID:100287178
            KEGG:hsa:100287178 UCSC:uc021xlk.1 CTD:100287178
            GeneCards:GC04P009217 HGNC:HGNC:44439 OMA:VERDTQE
            GenomeRNAi:100287178 NextBio:20776929 Uniprot:C9JVI0
        Length = 530

 Score = 455 (165.2 bits), Expect = 4.5e-43, P = 4.5e-43
 Identities = 109/315 (34%), Positives = 165/315 (52%)

Query:    26 SPIGILSKIQKIGSHLGHGREEDAHEFLRCAVDTMQSVCLKEFGAKGKIAEETTLIGLTF 85
             +P  ++   Q + +    G++EDAHEFL   VD M+  CL         +++TTLI   F
Sbjct:   138 NPGHVIQPSQALAAGFHRGKQEDAHEFLMFTVDAMKKACLPGHKQVDHHSKDTTLIHQIF 197

Query:    86 GGYLRSKIKCLKCLGKSELYERMMDLTVEIDGDIGTLEEALAQFTASEILVGENKYYCSR 145
             GGY RS+IKCL C G S+ ++  +D+ ++I     ++++AL Q    E L GEN Y+C  
Sbjct:   198 GGYWRSQIKCLHCHGISDTFDPYLDIALDIQA-AQSVQQALEQLVKPEELNGENAYHCGV 256

Query:   146 CKSYEKAKKKLTVLEEPNILTIVLKRFESGNFGKLNKSVWFPEVLNMAPYMSRTGDGSPM 205
             C     A K LT+     +L +VLKRF      K+ K+V +PE L+M PYMS+T  G  +
Sbjct:   257 CLQRAPASKTLTLHTSAKVLILVLKRFSDVTGNKIAKNVQYPECLDMQPYMSQTNTGPLV 316

Query:   206 YSLYAVVVHLDVTNATFSGHYVCYVKNSHEEWFRIDDSTVIPVKLERVLSEEAYMLLYAR 265
             Y LYAV+VH   +    +GHY  YVK    +W+++DD+ V    +  VLS++AY+L Y +
Sbjct:   317 YVLYAVLVHAGWS--CHNGHYFSYVKAQEGQWYKMDDAEVTASSITSVLSQQAYVLFYIQ 374

Query:   266 HSPRPPALIRNNVSHGVKSKKKNLEAVDLNNTS-KIRSNS---YIPSLDSKAQQKPCTDS 321
              S         +VS G + +    E  D   T  +++ +      P LD    ++  T  
Sbjct:   375 KSEWERH--SESVSRGREPRALGAEDTDRRATQGELKRDHPCLQAPELDEHLVER-ATQE 431

Query:   322 NQLFDRDEWKFRSMQ 336
             + L   D WKF   Q
Sbjct:   432 STL---DHWKFLQEQ 443


>UNIPROTKB|D6RCP7 [details] [associations]
            symbol:USP17L19 "Ubiquitin carboxyl-terminal hydrolase
            17-like protein 19" species:9606 "Homo sapiens" [GO:0004221
            "ubiquitin thiolesterase activity" evidence=IEA] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA]
            [GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0005783 "endoplasmic
            reticulum" evidence=IEA] InterPro:IPR001394 InterPro:IPR018200
            Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235
            Pfam:PF04774 GO:GO:0008234 GO:GO:0006511 GO:GO:0004221
            InterPro:IPR006861 HOGENOM:HOG000144638 OrthoDB:EOG42V8G0
            EMBL:AC108519 IPI:IPI00937246 RefSeq:NP_001243789.1
            UniGene:Hs.741137 ProteinModelPortal:D6RCP7 SMR:D6RCP7
            Ensembl:ENST00000515566 GeneID:100287404 KEGG:hsa:100287404
            CTD:100287404 GeneCards:GC04P009255 HGNC:HGNC:44447 OMA:EQLMKPE
            GenomeRNAi:100287404 NextBio:20777155 Uniprot:D6RCP7
        Length = 530

 Score = 455 (165.2 bits), Expect = 4.5e-43, P = 4.5e-43
 Identities = 109/315 (34%), Positives = 165/315 (52%)

Query:    26 SPIGILSKIQKIGSHLGHGREEDAHEFLRCAVDTMQSVCLKEFGAKGKIAEETTLIGLTF 85
             +P  ++   Q + +    G++EDAHEFL   VD M+  CL         +++TTLI   F
Sbjct:   138 NPGHVIQPSQALAAGFHRGKQEDAHEFLMFTVDAMKKACLPGHKQVDHHSKDTTLIHQIF 197

Query:    86 GGYLRSKIKCLKCLGKSELYERMMDLTVEIDGDIGTLEEALAQFTASEILVGENKYYCSR 145
             GGY RS+IKCL C G S+ ++  +D+ ++I     ++++AL Q    E L GEN Y+C  
Sbjct:   198 GGYWRSQIKCLHCHGISDTFDPYLDIALDIQA-AQSVQQALEQLVKPEELNGENAYHCGV 256

Query:   146 CKSYEKAKKKLTVLEEPNILTIVLKRFESGNFGKLNKSVWFPEVLNMAPYMSRTGDGSPM 205
             C     A K LT+     +L +VLKRF      K+ K+V +PE L+M PYMS+T  G  +
Sbjct:   257 CLQRAPASKTLTLHTSAKVLILVLKRFSDVTGNKIAKNVQYPECLDMQPYMSQTNTGPLV 316

Query:   206 YSLYAVVVHLDVTNATFSGHYVCYVKNSHEEWFRIDDSTVIPVKLERVLSEEAYMLLYAR 265
             Y LYAV+VH   +    +GHY  YVK    +W+++DD+ V    +  VLS++AY+L Y +
Sbjct:   317 YVLYAVLVHAGWS--CHNGHYFSYVKAQEGQWYKMDDAEVTASSITSVLSQQAYVLFYIQ 374

Query:   266 HSPRPPALIRNNVSHGVKSKKKNLEAVDLNNTS-KIRSNS---YIPSLDSKAQQKPCTDS 321
              S         +VS G + +    E  D   T  +++ +      P LD    ++  T  
Sbjct:   375 KSEWERH--SESVSRGREPRALGAEDTDRRATQGELKRDHPCLQAPELDEHLVER-ATQE 431

Query:   322 NQLFDRDEWKFRSMQ 336
             + L   D WKF   Q
Sbjct:   432 STL---DHWKFLQEQ 443


>UNIPROTKB|C9JJH3 [details] [associations]
            symbol:USP17L10 "Ubiquitin carboxyl-terminal hydrolase
            17-like protein 10" species:9606 "Homo sapiens" [GO:0004221
            "ubiquitin thiolesterase activity" evidence=IEA] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA]
            [GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0005783 "endoplasmic
            reticulum" evidence=IEA] InterPro:IPR001394 InterPro:IPR018200
            Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235
            Pfam:PF04774 GO:GO:0008234 GO:GO:0006511 GO:GO:0004221
            InterPro:IPR006861 HOGENOM:HOG000144638 OrthoDB:EOG42V8G0
            EMBL:AC108519 IPI:IPI00935891 RefSeq:NP_001243781.1
            UniGene:Hs.741130 ProteinModelPortal:C9JJH3 SMR:C9JJH3
            STRING:C9JJH3 PhosphoSite:C9JJH3 Ensembl:ENST00000417945
            GeneID:100287144 KEGG:hsa:100287144 CTD:100287144
            GeneCards:GC04P009213 HGNC:HGNC:44438 GenomeRNAi:100287144
            NextBio:20776895 Uniprot:C9JJH3
        Length = 530

 Score = 452 (164.2 bits), Expect = 9.3e-43, P = 9.3e-43
 Identities = 108/314 (34%), Positives = 165/314 (52%)

Query:    27 PIGILSKIQKIGSHLGHGREEDAHEFLRCAVDTMQSVCLKEFGAKGKIAEETTLIGLTFG 86
             P  ++   Q + +    G++EDAHEFL   VD M+  CL       + +++TTLI   FG
Sbjct:   139 PGHVIQPSQALAAGFHRGKQEDAHEFLMFTVDAMRKACLPGHKQVDRHSKDTTLIHQIFG 198

Query:    87 GYLRSKIKCLKCLGKSELYERMMDLTVEIDGDIGTLEEALAQFTASEILVGENKYYCSRC 146
             GY RS+IKCL C G S+ ++  +D+ ++I     ++++AL Q    E L GEN Y+C  C
Sbjct:   199 GYWRSQIKCLHCHGISDTFDPYLDIALDIQA-AQSVQQALEQLVKPEELNGENAYHCGVC 257

Query:   147 KSYEKAKKKLTVLEEPNILTIVLKRFESGNFGKLNKSVWFPEVLNMAPYMSRTGDGSPMY 206
                  A K LT+     +L +VLKRF      K+ K+V +PE L+M PYMS+   G  +Y
Sbjct:   258 LQRAPASKTLTLHNSAKVLILVLKRFPDVTGNKIAKNVQYPECLDMQPYMSQQNTGPLVY 317

Query:   207 SLYAVVVHLDVTNATFSGHYVCYVKNSHEEWFRIDDSTVIPVKLERVLSEEAYMLLYARH 266
              LYAV+VH   +    +GHY  YVK    +W+++DD+ V    +  VLS++AY+L Y + 
Sbjct:   318 VLYAVLVHAGWS--CHNGHYSSYVKAQEGQWYKMDDAEVTASSITSVLSQQAYVLFYIQK 375

Query:   267 SPRPPALIRNNVSHGVKSKKKNLEAVDLNNTS-KIRSNS---YIPSLDSKAQQKPCTDSN 322
             S         +VS G + +   +E  D   T  +++ +      P LD    ++  T  +
Sbjct:   376 SEWERH--SESVSRGREPRALGVEDTDRRATQGELKRDHPCLQAPELDEHLVER-ATQES 432

Query:   323 QLFDRDEWKFRSMQ 336
              L   D WKF   Q
Sbjct:   433 TL---DHWKFLQEQ 443


>UNIPROTKB|C9JLJ4 [details] [associations]
            symbol:USP17L13 "Ubiquitin carboxyl-terminal hydrolase
            17-like protein 13" species:9606 "Homo sapiens" [GO:0004221
            "ubiquitin thiolesterase activity" evidence=IEA] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA]
            [GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0005783 "endoplasmic
            reticulum" evidence=IEA] InterPro:IPR001394 InterPro:IPR018200
            Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235
            Pfam:PF04774 GO:GO:0008234 GO:GO:0006511 GO:GO:0004221
            InterPro:IPR006861 HOGENOM:HOG000144638 OrthoDB:EOG42V8G0
            EMBL:AC108519 IPI:IPI00937832 RefSeq:NP_001243784.1
            UniGene:Hs.741127 ProteinModelPortal:C9JLJ4 SMR:C9JLJ4
            STRING:C9JLJ4 Ensembl:ENST00000429667 GeneID:100287238
            KEGG:hsa:100287238 CTD:100287238 HGNC:HGNC:44441
            GenomeRNAi:100287238 NextBio:20776989 ArrayExpress:C9JLJ4
            Uniprot:C9JLJ4
        Length = 530

 Score = 451 (163.8 bits), Expect = 1.2e-42, P = 1.2e-42
 Identities = 108/315 (34%), Positives = 164/315 (52%)

Query:    26 SPIGILSKIQKIGSHLGHGREEDAHEFLRCAVDTMQSVCLKEFGAKGKIAEETTLIGLTF 85
             +P  ++   Q + +    G++EDAHEFL   VD M+  CL         +++TTLI   F
Sbjct:   138 NPGHVIQPSQALAAGFHRGKQEDAHEFLMFTVDAMKKACLPGHKQVDHPSKDTTLIHQIF 197

Query:    86 GGYLRSKIKCLKCLGKSELYERMMDLTVEIDGDIGTLEEALAQFTASEILVGENKYYCSR 145
             GGY RS+IKCL C G S+ ++  +D+ ++I     ++++AL Q    E L GEN Y+C  
Sbjct:   198 GGYWRSQIKCLHCHGISDTFDPYLDIALDIQA-AQSVQQALEQLVKPEELNGENAYHCGV 256

Query:   146 CKSYEKAKKKLTVLEEPNILTIVLKRFESGNFGKLNKSVWFPEVLNMAPYMSRTGDGSPM 205
             C     A K LT+     +L +VLKRF      K+ K+V +PE L+M PYMS+   G  +
Sbjct:   257 CLQRAPASKTLTLHTSAKVLILVLKRFSDVTGNKIAKNVQYPECLDMQPYMSQQNTGPLV 316

Query:   206 YSLYAVVVHLDVTNATFSGHYVCYVKNSHEEWFRIDDSTVIPVKLERVLSEEAYMLLYAR 265
             Y LYAV+VH   +    +GHY  YVK    +W+++DD+ V    +  VLS++AY+L Y +
Sbjct:   317 YVLYAVLVHAGWS--CHNGHYFSYVKAQEGQWYKMDDAEVTAASITSVLSQQAYVLFYIQ 374

Query:   266 HSPRPPALIRNNVSHGVKSKKKNLEAVDLNNTS-KIRSNS---YIPSLDSKAQQKPCTDS 321
              S         +VS G + +    E  D   T  +++ +      P LD    ++  T  
Sbjct:   375 KSEWERH--SESVSRGREPRALGAEDTDRRATQGELKRDHPCLQAPELDEHLVER-ATQE 431

Query:   322 NQLFDRDEWKFRSMQ 336
             + L   D WKF   Q
Sbjct:   432 STL---DRWKFLQEQ 443


>UNIPROTKB|D6R9N7 [details] [associations]
            symbol:USP17L18 "Ubiquitin carboxyl-terminal hydrolase
            17-like protein 18" species:9606 "Homo sapiens" [GO:0004221
            "ubiquitin thiolesterase activity" evidence=IEA] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA]
            [GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0005783 "endoplasmic
            reticulum" evidence=IEA] InterPro:IPR001394 InterPro:IPR018200
            Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235
            Pfam:PF04774 GO:GO:0008234 GO:GO:0006511 GO:GO:0004221
            InterPro:IPR006861 HOGENOM:HOG000144638 OrthoDB:EOG42V8G0
            EMBL:AC108519 IPI:IPI00937459 RefSeq:NP_001243788.1
            UniGene:Hs.741138 ProteinModelPortal:D6R9N7 SMR:D6R9N7
            Ensembl:ENST00000504209 GeneID:100287364 KEGG:hsa:100287364
            UCSC:uc011bwp.2 CTD:100287364 GeneCards:GC04P009250 HGNC:HGNC:44446
            OMA:CEFIAIN GenomeRNAi:100287364 NextBio:20777115 Uniprot:D6R9N7
        Length = 530

 Score = 451 (163.8 bits), Expect = 1.2e-42, P = 1.2e-42
 Identities = 108/315 (34%), Positives = 164/315 (52%)

Query:    26 SPIGILSKIQKIGSHLGHGREEDAHEFLRCAVDTMQSVCLKEFGAKGKIAEETTLIGLTF 85
             +P  ++   Q + +    G++EDAHEFL   VD M+  CL         +++TTLI   F
Sbjct:   138 NPGHVIQPSQALAAGFHRGKQEDAHEFLMFTVDAMKKACLPGHKQVDHHSKDTTLIHQIF 197

Query:    86 GGYLRSKIKCLKCLGKSELYERMMDLTVEIDGDIGTLEEALAQFTASEILVGENKYYCSR 145
             GGY RS+IKCL C G S+ ++  +D+ ++I     ++++AL Q    E L GEN Y+C  
Sbjct:   198 GGYWRSQIKCLHCHGISDTFDPYLDIALDIQA-AQSVQQALEQLVKPEELNGENAYHCGV 256

Query:   146 CKSYEKAKKKLTVLEEPNILTIVLKRFESGNFGKLNKSVWFPEVLNMAPYMSRTGDGSPM 205
             C     A K LT+     +L +VLKRF      K+ K+V +PE L+M PYMS+T  G  +
Sbjct:   257 CLQRAPASKTLTLHTSAKVLILVLKRFSDVTGNKIAKNVQYPECLDMQPYMSQTNTGPLV 316

Query:   206 YSLYAVVVHLDVTNATFSGHYVCYVKNSHEEWFRIDDSTVIPVKLERVLSEEAYMLLYAR 265
             Y LYAV+VH   +    +GHY  YVK    +W+++DD+ V    +  VLS++AY+L Y +
Sbjct:   317 YVLYAVLVHAGWS--CHNGHYFSYVKAQEGQWYKMDDAEVTASSITSVLSQQAYVLFYIQ 374

Query:   266 HSPRPPALIRNNVSHGVKSKKKNLEAVDLN-NTSKIRSNS---YIPSLDSKAQQKPCTDS 321
              S         +VS G + +    E  D      +++ +      P LD    ++  T  
Sbjct:   375 KSEWERH--SESVSRGREPRALGAEDTDRRAKQGELKRDHPCLQAPELDEHLVER-ATQE 431

Query:   322 NQLFDRDEWKFRSMQ 336
             + L   D WKF   Q
Sbjct:   432 STL---DHWKFLQEQ 443


>UNIPROTKB|D6RBQ6 [details] [associations]
            symbol:USP17L17 "Ubiquitin carboxyl-terminal hydrolase
            17-like protein 17" species:9606 "Homo sapiens" [GO:0004221
            "ubiquitin thiolesterase activity" evidence=IEA] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA]
            [GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0005783 "endoplasmic
            reticulum" evidence=IEA] InterPro:IPR001394 InterPro:IPR018200
            Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235
            Pfam:PF04774 GO:GO:0008234 GO:GO:0006511 GO:GO:0004221
            InterPro:IPR006861 HOGENOM:HOG000144638 OrthoDB:EOG42V8G0
            EMBL:AC108519 IPI:IPI00937633 RefSeq:NP_001243786.1
            UniGene:Hs.741129 ProteinModelPortal:D6RBQ6 SMR:D6RBQ6
            Ensembl:ENST00000511568 GeneID:100287327 KEGG:hsa:100287327
            CTD:100287327 GeneCards:GC04P009248 HGNC:HGNC:44445 OMA:QNLKTTK
            GenomeRNAi:100287327 NextBio:20777078 Uniprot:D6RBQ6
        Length = 530

 Score = 451 (163.8 bits), Expect = 1.2e-42, P = 1.2e-42
 Identities = 108/315 (34%), Positives = 164/315 (52%)

Query:    26 SPIGILSKIQKIGSHLGHGREEDAHEFLRCAVDTMQSVCLKEFGAKGKIAEETTLIGLTF 85
             +P  ++   Q + +    G++EDAHEFL   VD M+  CL         +++TTLI   F
Sbjct:   138 NPGHVIQPSQALAAGFHRGKQEDAHEFLMFTVDAMKKACLPGHKQVDHHSKDTTLIHQIF 197

Query:    86 GGYLRSKIKCLKCLGKSELYERMMDLTVEIDGDIGTLEEALAQFTASEILVGENKYYCSR 145
             GGY RS+IKCL C G S+ ++  +D+ ++I     ++++AL Q    E L GEN Y+C  
Sbjct:   198 GGYWRSQIKCLHCHGISDTFDPYLDIALDIQA-AQSVQQALEQLVKPEELNGENAYHCGV 256

Query:   146 CKSYEKAKKKLTVLEEPNILTIVLKRFESGNFGKLNKSVWFPEVLNMAPYMSRTGDGSPM 205
             C     A K LT+     +L +VLKRF      K+ K+V +PE L+M PYMS+   G  +
Sbjct:   257 CLQRAPASKTLTLHTSAKVLILVLKRFSDVTGNKIAKNVQYPECLDMQPYMSQQNTGPLV 316

Query:   206 YSLYAVVVHLDVTNATFSGHYVCYVKNSHEEWFRIDDSTVIPVKLERVLSEEAYMLLYAR 265
             Y LYAV+VH   +    +GHY  YVK    +W+++DD+ V    +  VLS++AY+L Y +
Sbjct:   317 YVLYAVLVHAGWS--CHNGHYFSYVKAQEGQWYKMDDAEVTAASITSVLSQQAYVLFYIQ 374

Query:   266 HSPRPPALIRNNVSHGVKSKKKNLEAVDLNNTS-KIRSNS---YIPSLDSKAQQKPCTDS 321
              S         +VS G + +    E  D   T  +++ +      P LD    ++  T  
Sbjct:   375 KSEWERH--SESVSRGREPRALGAEDTDRRATQGELKRDHPCLQAPELDEHLVER-ATQE 431

Query:   322 NQLFDRDEWKFRSMQ 336
             + L   D WKF   Q
Sbjct:   432 STL---DHWKFLQEQ 443


>UNIPROTKB|I3L0E4 [details] [associations]
            symbol:USP17L13 "Ubiquitin carboxyl-terminal hydrolase"
            species:9606 "Homo sapiens" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0008234 "cysteine-type
            peptidase activity" evidence=IEA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 Pfam:PF04774 GO:GO:0008234 GO:GO:0006511
            GO:GO:0004221 InterPro:IPR006861 EMBL:AC108519
            ProteinModelPortal:I3L0E4 SMR:I3L0E4 Ensembl:ENST00000421288
            OMA:PELEECG Uniprot:I3L0E4
        Length = 530

 Score = 451 (163.8 bits), Expect = 1.2e-42, P = 1.2e-42
 Identities = 108/315 (34%), Positives = 164/315 (52%)

Query:    26 SPIGILSKIQKIGSHLGHGREEDAHEFLRCAVDTMQSVCLKEFGAKGKIAEETTLIGLTF 85
             +P  ++   Q + +    G++EDAHEFL   VD M+  CL         +++TTLI   F
Sbjct:   138 NPGHVIQPSQALAAGFHRGKQEDAHEFLMFTVDAMKKACLPGHKQVDHPSKDTTLIHQIF 197

Query:    86 GGYLRSKIKCLKCLGKSELYERMMDLTVEIDGDIGTLEEALAQFTASEILVGENKYYCSR 145
             GGY RS+IKCL C G S+ ++  +D+ ++I     ++++AL Q    E L GEN Y+C  
Sbjct:   198 GGYWRSQIKCLHCHGISDTFDPYLDIALDIQA-AQSVQQALEQLVKPEELNGENAYHCGV 256

Query:   146 CKSYEKAKKKLTVLEEPNILTIVLKRFESGNFGKLNKSVWFPEVLNMAPYMSRTGDGSPM 205
             C     A K LT+     +L +VLKRF      K+ K+V +PE L+M PYMS+   G  +
Sbjct:   257 CLQRAPASKTLTLHTSAKVLILVLKRFSDVTGNKIAKNVQYPECLDMQPYMSQQNTGPLV 316

Query:   206 YSLYAVVVHLDVTNATFSGHYVCYVKNSHEEWFRIDDSTVIPVKLERVLSEEAYMLLYAR 265
             Y LYAV+VH   +    +GHY  YVK    +W+++DD+ V    +  VLS++AY+L Y +
Sbjct:   317 YVLYAVLVHAGWS--CHNGHYFSYVKAQEGQWYKMDDAEVTAASITSVLSQQAYVLFYIQ 374

Query:   266 HSPRPPALIRNNVSHGVKSKKKNLEAVDLNNTS-KIRSNS---YIPSLDSKAQQKPCTDS 321
              S         +VS G + +    E  D   T  +++ +      P LD    ++  T  
Sbjct:   375 KSEWERH--SESVSRGREPRALGAEDTDRRATQGELKRDHPCLQAPELDEHLVER-ATQE 431

Query:   322 NQLFDRDEWKFRSMQ 336
             + L   D WKF   Q
Sbjct:   432 STL---DRWKFLQEQ 443


>UNIPROTKB|A8MUK1 [details] [associations]
            symbol:USP17L5 "Ubiquitin carboxyl-terminal hydrolase
            17-like protein 5" species:9606 "Homo sapiens" [GO:0004221
            "ubiquitin thiolesterase activity" evidence=IEA] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA]
            [GO:0006915 "apoptotic process" evidence=IEA] [GO:0008234
            "cysteine-type peptidase activity" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
            evidence=IEA] InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443
            PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 Pfam:PF04774
            GO:GO:0005634 GO:GO:0006915 GO:GO:0008234 GO:GO:0006511
            GO:GO:0004221 EMBL:AC116655 InterPro:IPR006861 HPA:HPA045642
            HOGENOM:HOG000144638 HOVERGEN:HBG007129 KO:K11845 IPI:IPI00880103
            RefSeq:NP_001229258.1 UniGene:Hs.740243 ProteinModelPortal:A8MUK1
            SMR:A8MUK1 STRING:A8MUK1 PRIDE:A8MUK1 Ensembl:ENST00000507227
            GeneID:728386 KEGG:hsa:728386 CTD:728386 GeneCards:GC04P009214
            GeneCards:GC04P009342 HGNC:HGNC:37177 neXtProt:NX_A8MUK1
            PharmGKB:PA165664776 InParanoid:A8MUK1 OMA:CASADER
            GenomeRNAi:728386 NextBio:127023 ArrayExpress:A8MUK1
            Genevestigator:A8MUK1 Uniprot:A8MUK1
        Length = 530

 Score = 449 (163.1 bits), Expect = 1.9e-42, P = 1.9e-42
 Identities = 108/315 (34%), Positives = 164/315 (52%)

Query:    26 SPIGILSKIQKIGSHLGHGREEDAHEFLRCAVDTMQSVCLKEFGAKGKIAEETTLIGLTF 85
             +P  ++   Q + +    G++EDAHEFL   VD M+  CL         +++TTLI   F
Sbjct:   138 NPGHVIQPSQALAAGFHRGKQEDAHEFLMFTVDAMKKACLPGHKQVDHHSKDTTLIHQIF 197

Query:    86 GGYLRSKIKCLKCLGKSELYERMMDLTVEIDGDIGTLEEALAQFTASEILVGENKYYCSR 145
             GGY RS+IKCL C G S+ ++  +D+ ++I     ++++AL Q    E L GEN Y+C  
Sbjct:   198 GGYWRSQIKCLHCHGISDTFDPYLDIALDIQA-AQSVQQALEQLAKPEELNGENAYHCGV 256

Query:   146 CKSYEKAKKKLTVLEEPNILTIVLKRFESGNFGKLNKSVWFPEVLNMAPYMSRTGDGSPM 205
             C     A K LT+     +L +VLKRF      K+ K+V +PE L+M PYMS+   G  +
Sbjct:   257 CLQRAPASKTLTLHTSAKVLILVLKRFSDVTGNKIAKNVQYPECLDMQPYMSQPNTGPLV 316

Query:   206 YSLYAVVVHLDVTNATFSGHYVCYVKNSHEEWFRIDDSTVIPVKLERVLSEEAYMLLYAR 265
             Y LYAV+VH   +    +GHY  YVK    +W+++DD+ V    +  VLS++AY+L Y +
Sbjct:   317 YVLYAVLVHAGWS--CHNGHYFSYVKAQEGQWYKMDDAEVTASSITSVLSQQAYVLFYIQ 374

Query:   266 HSPRPPALIRNNVSHGVKSKKKNLEAVDLNNTS-KIRSNS---YIPSLDSKAQQKPCTDS 321
              S         +VS G + +    E  D   T  +++ +      P LD    ++  T  
Sbjct:   375 KSEWERH--SESVSRGREPRALGAEDTDRRATQGELKRDHPCLQAPELDEHLVER-ATQE 431

Query:   322 NQLFDRDEWKFRSMQ 336
             + L   D WKF   Q
Sbjct:   432 STL---DHWKFLQEQ 443


>UNIPROTKB|C9J2P7 [details] [associations]
            symbol:USP17L15 "Ubiquitin carboxyl-terminal hydrolase
            17-like protein 15" species:9606 "Homo sapiens" [GO:0004221
            "ubiquitin thiolesterase activity" evidence=IEA] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA]
            [GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0005783 "endoplasmic
            reticulum" evidence=IEA] InterPro:IPR001394 InterPro:IPR018200
            Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235
            Pfam:PF04774 GO:GO:0008234 GO:GO:0006511 GO:GO:0004221
            InterPro:IPR006861 HOGENOM:HOG000144638 OrthoDB:EOG42V8G0
            EMBL:AC108519 IPI:IPI00937986 ProteinModelPortal:C9J2P7 SMR:C9J2P7
            STRING:C9J2P7 Ensembl:ENST00000456464 GeneCards:GC04P009236
            HGNC:HGNC:44443 OMA:KISACVV Uniprot:C9J2P7
        Length = 530

 Score = 449 (163.1 bits), Expect = 1.9e-42, P = 1.9e-42
 Identities = 108/315 (34%), Positives = 165/315 (52%)

Query:    26 SPIGILSKIQKIGSHLGHGREEDAHEFLRCAVDTMQSVCLKEFGAKGKIAEETTLIGLTF 85
             +P  ++   Q + +    G++EDAHEFL   VD M+  CL         +++TTLI   F
Sbjct:   138 NPGHVIQPSQALAAGFHRGKQEDAHEFLMFTVDAMKKACLPGHKQVDHHSKDTTLIHQIF 197

Query:    86 GGYLRSKIKCLKCLGKSELYERMMDLTVEIDGDIGTLEEALAQFTASEILVGENKYYCSR 145
             GGY RS+IKCL C G S+ ++  +D+ ++I     ++++AL Q    E L GEN Y+C  
Sbjct:   198 GGYWRSQIKCLHCHGISDTFDPYLDIALDIQA-AQSVQQALEQLVKPEELNGENAYHCGV 256

Query:   146 CKSYEKAKKKLTVLEEPNILTIVLKRFESGNFGKLNKSVWFPEVLNMAPYMSRTGDGSPM 205
             C     A K LT+     +L +VLKRF      K++K+V +PE L+M  YMS+T  G  +
Sbjct:   257 CLQRAPASKTLTLHTSAKVLILVLKRFSDVTGNKIDKNVQYPECLDMKLYMSQTNSGPLV 316

Query:   206 YSLYAVVVHLDVTNATFSGHYVCYVKNSHEEWFRIDDSTVIPVKLERVLSEEAYMLLYAR 265
             Y LYAV+VH   +    +GHY  YVK    +W+++DD+ V    +  VLS++AY+L Y +
Sbjct:   317 YVLYAVLVHAGWS--CHNGHYFSYVKAQEGQWYKMDDAEVTASSITSVLSQQAYVLFYIQ 374

Query:   266 HSPRPPALIRNNVSHGVKSKKKNLEAVDLNNTS-KIRSNS---YIPSLDSKAQQKPCTDS 321
              S         +VS G + +    E  D   T  +++ +      P LD    ++  T  
Sbjct:   375 KSEWERH--SESVSRGREPRALGAEDTDRRATQGELKRDHPCLQAPELDEHLVER-ATQE 431

Query:   322 NQLFDRDEWKFRSMQ 336
             + L   D WKF   Q
Sbjct:   432 STL---DHWKFLQEQ 443


>UNIPROTKB|D6RA61 [details] [associations]
            symbol:USP17L22 "Ubiquitin carboxyl-terminal hydrolase
            17-like protein 22" species:9606 "Homo sapiens" [GO:0004221
            "ubiquitin thiolesterase activity" evidence=IEA] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA]
            [GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0005783 "endoplasmic
            reticulum" evidence=IEA] InterPro:IPR001394 InterPro:IPR018200
            Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235
            Pfam:PF04774 GO:GO:0008234 GO:GO:0006511 GO:GO:0004221
            InterPro:IPR006861 HOGENOM:HOG000144638 OrthoDB:EOG42V8G0 KO:K11845
            EMBL:AC108519 IPI:IPI00936680 RefSeq:NP_001243792.1
            UniGene:Hs.723053 ProteinModelPortal:D6RA61 SMR:D6RA61
            Ensembl:ENST00000511280 GeneID:100287513 KEGG:hsa:100287513
            CTD:100287513 GeneCards:GC04P009271 HGNC:HGNC:44450 OMA:DEENAYH
            GenomeRNAi:100287513 NextBio:20777264 Uniprot:D6RA61
        Length = 530

 Score = 449 (163.1 bits), Expect = 1.9e-42, P = 1.9e-42
 Identities = 108/315 (34%), Positives = 164/315 (52%)

Query:    26 SPIGILSKIQKIGSHLGHGREEDAHEFLRCAVDTMQSVCLKEFGAKGKIAEETTLIGLTF 85
             +P  ++   Q + +    G++EDAHEFL   VD M+  CL         +++TTLI   F
Sbjct:   138 NPGHVIQPSQALAAGFHRGKQEDAHEFLMFTVDAMKKACLPGHKQVDHHSKDTTLIHQIF 197

Query:    86 GGYLRSKIKCLKCLGKSELYERMMDLTVEIDGDIGTLEEALAQFTASEILVGENKYYCSR 145
             GGY RS+IKCL C G S+ ++  +D+ ++I     ++++AL Q    E L GEN Y+C  
Sbjct:   198 GGYWRSQIKCLHCHGISDTFDPYLDIALDIQA-AQSVQQALEQLVKPEELNGENAYHCGV 256

Query:   146 CKSYEKAKKKLTVLEEPNILTIVLKRFESGNFGKLNKSVWFPEVLNMAPYMSRTGDGSPM 205
             C     A K LT+     +L +VLKRF      K+ K+V +PE L+M PYMS+   G  +
Sbjct:   257 CLQRAPASKTLTLHTSAKVLILVLKRFSDVTGNKIAKNVQYPECLDMQPYMSQQNTGPLV 316

Query:   206 YSLYAVVVHLDVTNATFSGHYVCYVKNSHEEWFRIDDSTVIPVKLERVLSEEAYMLLYAR 265
             Y LYAV+VH   +    +GHY  YVK    +W+++DD+ V    +  VLS++AY+L Y +
Sbjct:   317 YVLYAVLVHAGWS--CHNGHYFSYVKAQEGQWYKMDDAEVTASSITSVLSQQAYVLFYIQ 374

Query:   266 HSPRPPALIRNNVSHGVKSKKKNLEAVDLNNTS-KIRSNS---YIPSLDSKAQQKPCTDS 321
              S         +VS G + +    E  D   T  +++ +      P LD    ++  T  
Sbjct:   375 KSEWERH--SESVSRGREPRALGAEDTDRRATQGELKRDHPCLQAPELDEHLVER-ATQE 431

Query:   322 NQLFDRDEWKFRSMQ 336
             + L   D WKF   Q
Sbjct:   432 STL---DHWKFLQEQ 443


>UNIPROTKB|D6RJB6 [details] [associations]
            symbol:USP17L20 "Ubiquitin carboxyl-terminal hydrolase
            17-like protein 20" species:9606 "Homo sapiens" [GO:0004221
            "ubiquitin thiolesterase activity" evidence=IEA] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA]
            [GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0005783 "endoplasmic
            reticulum" evidence=IEA] InterPro:IPR001394 InterPro:IPR018200
            Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235
            Pfam:PF04774 GO:GO:0008234 GO:GO:0006511 GO:GO:0004221
            InterPro:IPR006861 HOGENOM:HOG000144638 OrthoDB:EOG42V8G0
            EMBL:AC108519 UniGene:Hs.722783 IPI:IPI00967528
            RefSeq:NP_001243790.1 UniGene:Hs.741133 ProteinModelPortal:D6RJB6
            SMR:D6RJB6 Ensembl:ENST00000506151 GeneID:100287441
            KEGG:hsa:100287441 CTD:100287441 GeneCards:GC04P009259
            HGNC:HGNC:44448 OMA:NGENAYQ GenomeRNAi:100287441 NextBio:20777192
            Uniprot:D6RJB6
        Length = 530

 Score = 449 (163.1 bits), Expect = 1.9e-42, P = 1.9e-42
 Identities = 108/315 (34%), Positives = 164/315 (52%)

Query:    26 SPIGILSKIQKIGSHLGHGREEDAHEFLRCAVDTMQSVCLKEFGAKGKIAEETTLIGLTF 85
             +P  ++   Q + +    G++EDAHEFL   VD M+  CL         +++TTLI   F
Sbjct:   138 NPGHVIQPSQALAAGFHRGKQEDAHEFLMFTVDAMKKACLPGHKQVDHHSKDTTLIHQIF 197

Query:    86 GGYLRSKIKCLKCLGKSELYERMMDLTVEIDGDIGTLEEALAQFTASEILVGENKYYCSR 145
             GGY RS+IKCL C G S+ ++  +D+ ++I     ++++AL Q    E L GEN Y+C  
Sbjct:   198 GGYWRSQIKCLHCHGISDTFDPYLDIALDIQA-AQSVQQALEQLVKPEELNGENAYHCGV 256

Query:   146 CKSYEKAKKKLTVLEEPNILTIVLKRFESGNFGKLNKSVWFPEVLNMAPYMSRTGDGSPM 205
             C     A K LT+     +L +VLKRF      K+ K+V +PE L+M PYMS+   G  +
Sbjct:   257 CLQRAPASKTLTLHTSAKVLILVLKRFSDVTGNKIAKNVQYPECLDMQPYMSQPNTGPLV 316

Query:   206 YSLYAVVVHLDVTNATFSGHYVCYVKNSHEEWFRIDDSTVIPVKLERVLSEEAYMLLYAR 265
             Y LYAV+VH   +    +GHY  YVK    +W+++DD+ V    +  VLS++AY+L Y +
Sbjct:   317 YVLYAVLVHAGWS--CHNGHYFSYVKAQEGQWYKMDDAEVTASSITSVLSQQAYVLFYIQ 374

Query:   266 HSPRPPALIRNNVSHGVKSKKKNLEAVDLNNTS-KIRSNS---YIPSLDSKAQQKPCTDS 321
              S         +VS G + +    E  D   T  +++ +      P LD    ++  T  
Sbjct:   375 KSEWERH--SESVSRGREPRALGAEDTDRRATQGELKRDHPCLQAPELDEHLVER-ATQE 431

Query:   322 NQLFDRDEWKFRSMQ 336
             + L   D WKF   Q
Sbjct:   432 STL---DHWKFLQEQ 443


>UNIPROTKB|Q0WX57 [details] [associations]
            symbol:USP17L24 "Ubiquitin carboxyl-terminal hydrolase
            17-like protein 24" species:9606 "Homo sapiens" [GO:0004221
            "ubiquitin thiolesterase activity" evidence=IEA] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA]
            [GO:0006915 "apoptotic process" evidence=IEA] [GO:0008234
            "cysteine-type peptidase activity" evidence=IEA] [GO:0005730
            "nucleolus" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
            evidence=IEA] InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443
            PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 Pfam:PF04774
            GO:GO:0006915 GO:GO:0005730 GO:GO:0008234 GO:GO:0006511
            GO:GO:0004221 eggNOG:COG5533 EMBL:AC116655 InterPro:IPR006861
            HPA:HPA045642 HOVERGEN:HBG007129 OrthoDB:EOG42V8G0 KO:K11845
            GeneCards:GC04P009214 UniGene:Hs.722783 UniGene:Hs.741133
            UniGene:Hs.723053 EMBL:AF544011 EMBL:AF544012 EMBL:AY188990
            IPI:IPI00736155 RefSeq:NP_001229255.1 RefSeq:NP_001229256.1
            RefSeq:NP_001229257.1 RefSeq:NP_001229259.1 RefSeq:NP_001229260.1
            RefSeq:NP_001229261.1 RefSeq:NP_001243796.1 UniGene:Hs.553810
            UniGene:Hs.631527 ProteinModelPortal:Q0WX57 SMR:Q0WX57
            IntAct:Q0WX57 STRING:Q0WX57 MEROPS:C19.023 PRIDE:Q0WX57
            GeneID:728369 GeneID:728373 GeneID:728379 GeneID:728393
            GeneID:728400 GeneID:728405 GeneID:728419 KEGG:hsa:728369
            KEGG:hsa:728373 KEGG:hsa:728379 KEGG:hsa:728393 KEGG:hsa:728400
            KEGG:hsa:728405 KEGG:hsa:728419 UCSC:uc021xll.1 CTD:728369
            CTD:728373 CTD:728379 CTD:728393 CTD:728400 CTD:728405 CTD:728419
            GeneCards:GC04P009360 GeneCards:GC04U901534 H-InvDB:HIX0163954
            H-InvDB:HIX0163955 HGNC:HGNC:44453 HGNC:HGNC:44452 HGNC:HGNC:44454
            HGNC:HGNC:44455 HGNC:HGNC:44456 HGNC:HGNC:44457 HGNC:HGNC:44458
            MIM:607011 neXtProt:NX_Q0WX57 InParanoid:Q0WX57 OMA:DGENAYH
            NextBio:126977 ArrayExpress:Q0WX57 Genevestigator:Q0WX57
            Uniprot:Q0WX57
        Length = 530

 Score = 449 (163.1 bits), Expect = 1.9e-42, P = 1.9e-42
 Identities = 108/315 (34%), Positives = 164/315 (52%)

Query:    26 SPIGILSKIQKIGSHLGHGREEDAHEFLRCAVDTMQSVCLKEFGAKGKIAEETTLIGLTF 85
             +P  ++   Q + +    G++EDAHEFL   VD M+  CL         +++TTLI   F
Sbjct:   138 NPGHVIQPSQALAAGFHRGKQEDAHEFLMFTVDAMKKACLPGHKQVDHHSKDTTLIHQIF 197

Query:    86 GGYLRSKIKCLKCLGKSELYERMMDLTVEIDGDIGTLEEALAQFTASEILVGENKYYCSR 145
             GGY RS+IKCL C G S+ ++  +D+ ++I     ++++AL Q    E L GEN Y+C  
Sbjct:   198 GGYWRSQIKCLHCHGISDTFDPYLDIALDIQA-AQSVQQALEQLVKPEELNGENAYHCGV 256

Query:   146 CKSYEKAKKKLTVLEEPNILTIVLKRFESGNFGKLNKSVWFPEVLNMAPYMSRTGDGSPM 205
             C     A K LT+     +L +VLKRF      K+ K+V +PE L+M PYMS+   G  +
Sbjct:   257 CLQRAPASKTLTLHTSAKVLILVLKRFSDVTGNKIAKNVQYPECLDMQPYMSQPNTGPLV 316

Query:   206 YSLYAVVVHLDVTNATFSGHYVCYVKNSHEEWFRIDDSTVIPVKLERVLSEEAYMLLYAR 265
             Y LYAV+VH   +    +GHY  YVK    +W+++DD+ V    +  VLS++AY+L Y +
Sbjct:   317 YVLYAVLVHAGWS--CHNGHYFSYVKAQEGQWYKMDDAEVTASSITSVLSQQAYVLFYIQ 374

Query:   266 HSPRPPALIRNNVSHGVKSKKKNLEAVDLNNTS-KIRSNS---YIPSLDSKAQQKPCTDS 321
              S         +VS G + +    E  D   T  +++ +      P LD    ++  T  
Sbjct:   375 KSEWERH--SESVSRGREPRALGAEDTDRRATQGELKRDHPCLQAPELDEHLVER-ATQE 431

Query:   322 NQLFDRDEWKFRSMQ 336
             + L   D WKF   Q
Sbjct:   432 STL---DHWKFLQEQ 443


>UNIPROTKB|Q6R6M4 [details] [associations]
            symbol:USP17L2 "Ubiquitin carboxyl-terminal hydrolase 17"
            species:9606 "Homo sapiens" [GO:0006511 "ubiquitin-dependent
            protein catabolic process" evidence=IEA] [GO:0006915 "apoptotic
            process" evidence=IEA] [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IMP] [GO:0016579 "protein deubiquitination"
            evidence=IDA] [GO:0000075 "cell cycle checkpoint" evidence=IMP]
            [GO:0004843 "ubiquitin-specific protease activity"
            evidence=IMP;IDA] [GO:0007093 "mitotic cell cycle checkpoint"
            evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
            [GO:0005634 "nucleus" evidence=IDA] [GO:0070536 "protein K63-linked
            deubiquitination" evidence=IMP;IDA] [GO:0042981 "regulation of
            apoptotic process" evidence=IMP] [GO:0031064 "negative regulation
            of histone deacetylation" evidence=IMP] [GO:0050691 "regulation of
            defense response to virus by host" evidence=IMP] [GO:1900245
            "positive regulation of MDA-5 signaling pathway" evidence=IMP]
            [GO:1900246 "positive regulation of RIG-I signaling pathway"
            evidence=IMP] [GO:0071108 "protein K48-linked deubiquitination"
            evidence=IMP] [GO:0030334 "regulation of cell migration"
            evidence=IMP] [GO:0032321 "positive regulation of Rho GTPase
            activity" evidence=IMP] [GO:1900027 "regulation of ruffle assembly"
            evidence=IMP] [GO:0034261 "negative regulation of Ras GTPase
            activity" evidence=IDA] [GO:0090315 "negative regulation of protein
            targeting to membrane" evidence=IMP] [GO:0010955 "negative
            regulation of protein processing" evidence=IMP] [GO:0071586
            "CAAX-box protein processing" evidence=IMP] [GO:0005789
            "endoplasmic reticulum membrane" evidence=IDA] [GO:0042127
            "regulation of cell proliferation" evidence=IMP] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 Pfam:PF04774 GO:GO:0005634 GO:GO:0006915
            GO:GO:0042981 GO:GO:0005789 GO:GO:0042127 GO:GO:0030334
            GO:GO:0006511 GO:GO:0032321 GO:GO:0071108 GO:GO:0070536
            GO:GO:0004843 GO:GO:0004221 GO:GO:0031575 GO:GO:0010955
            eggNOG:COG5533 GO:GO:0034261 EMBL:AC130366 GO:GO:0031576
            GO:GO:1900245 GO:GO:1900246 GO:GO:0031064 GO:GO:0071586
            InterPro:IPR006861 GO:GO:0050691 GO:GO:0090315 HSSP:P54578
            GO:GO:1900027 HPA:HPA045642 HOGENOM:HOG000144638 HOVERGEN:HBG007129
            OrthoDB:EOG42V8G0 EMBL:AY509884 IPI:IPI00883911 RefSeq:NP_958804.2
            UniGene:Hs.531448 ProteinModelPortal:Q6R6M4 SMR:Q6R6M4
            IntAct:Q6R6M4 STRING:Q6R6M4 DMDM:187663988 PRIDE:Q6R6M4
            DNASU:377630 Ensembl:ENST00000333796 GeneID:377630 KEGG:hsa:377630
            UCSC:uc003wvc.1 CTD:377630 GeneCards:GC08M011994 H-InvDB:HIX0034323
            HGNC:HGNC:34434 MIM:610186 neXtProt:NX_Q6R6M4 PharmGKB:PA165586023
            InParanoid:Q6R6M4 KO:K11845 PhylomeDB:Q6R6M4 GenomeRNAi:377630
            NextBio:100679 Genevestigator:Q6R6M4 Uniprot:Q6R6M4
        Length = 530

 Score = 448 (162.8 bits), Expect = 2.5e-42, P = 2.5e-42
 Identities = 109/315 (34%), Positives = 163/315 (51%)

Query:    26 SPIGILSKIQKIGSHLGHGREEDAHEFLRCAVDTMQSVCLKEFGAKGKIAEETTLIGLTF 85
             SP  ++   Q + +    G++EDAHEFL   VD M+  CL         +++TTLI   F
Sbjct:   138 SPGHVIQPSQALAAGFHRGKQEDAHEFLMFTVDAMKKACLPGHKQVDHHSKDTTLIHQIF 197

Query:    86 GGYLRSKIKCLKCLGKSELYERMMDLTVEIDGDIGTLEEALAQFTASEILVGENKYYCSR 145
             GG  RS+IKCL C G S+ ++  +D+ ++I     ++++AL Q    E L GEN Y+C  
Sbjct:   198 GGCWRSQIKCLHCHGISDTFDPYLDIALDIQA-AQSVKQALEQLVKPEELNGENAYHCGL 256

Query:   146 CKSYEKAKKKLTVLEEPNILTIVLKRFESGNFGKLNKSVWFPEVLNMAPYMSRTGDGSPM 205
             C     A K LT+     +L +VLKRF      KL K+V +PE L+M PYMS+   G  +
Sbjct:   257 CLQRAPASKTLTLHTSAKVLILVLKRFSDVTGNKLAKNVQYPECLDMQPYMSQQNTGPLV 316

Query:   206 YSLYAVVVHLDVTNATFSGHYVCYVKNSHEEWFRIDDSTVIPVKLERVLSEEAYMLLYAR 265
             Y LYAV+VH   +     GHY  YVK    +W+++DD+ V    +  VLS++AY+L Y +
Sbjct:   317 YVLYAVLVHAGWS--CHDGHYFSYVKAQEGQWYKMDDAKVTACSITSVLSQQAYVLFYIQ 374

Query:   266 HSPRPPALIRNNVSHGVKSKKKNLEAVDLNNTS-KIRSNS---YIPSLDSKAQQKPCTDS 321
              S         +VS G + +    E  D   T  +++ +      P LD +  ++  T  
Sbjct:   375 KSEWERH--SESVSRGREPRALGAEDTDRRATQGELKRDHPCLQAPELDERLVER-ATQE 431

Query:   322 NQLFDRDEWKFRSMQ 336
             + L   D WKF   Q
Sbjct:   432 STL---DHWKFPQEQ 443


>POMBASE|SPCC1682.12c [details] [associations]
            symbol:ubp16 "ubiquitin C-terminal hydrolase Ubp16"
            species:4896 "Schizosaccharomyces pombe" [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] [GO:0004843
            "ubiquitin-specific protease activity" evidence=IDA] [GO:0005634
            "nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
            [GO:0006511 "ubiquitin-dependent protein catabolic process"
            evidence=IEA] [GO:0016579 "protein deubiquitination" evidence=IDA]
            InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 PomBase:SPCC1682.12c GO:GO:0005730
            EMBL:CU329672 GenomeReviews:CU329672_GR GO:GO:0006511 GO:GO:0004843
            GO:GO:0016579 GO:GO:0004221 eggNOG:COG5077 HSSP:P54578
            OrthoDB:EOG4JHGQN KO:K11855 PIR:T41069 RefSeq:NP_587805.1
            ProteinModelPortal:O74442 MEROPS:C19.A66
            EnsemblFungi:SPCC1682.12c.1 GeneID:2538947 KEGG:spo:SPCC1682.12c
            OMA:YSHETEN NextBio:20800122 Uniprot:O74442
        Length = 457

 Score = 439 (159.6 bits), Expect = 2.2e-41, P = 2.2e-41
 Identities = 96/243 (39%), Positives = 137/243 (56%)

Query:    27 PIGILSKIQKIGSHLGHGREEDAHEFLRCAVDTMQSVCLKEFGAKGKIAEETTLIGLTFG 86
             P GI S ++ I SH    R+EDAHEF+R  VD  Q  CL+        + ET+++   FG
Sbjct:   193 PSGIQSMLKVISSHFRPYRQEDAHEFMRYLVDAWQKSCLQNHKNLDHPSRETSVVHRIFG 252

Query:    87 GYLRSKIKCLKCLGKSELYERMMDLTVEIDGDIGTLEEALAQFTASEILVGENKYYCSRC 146
             GYLR +I C  C   S  Y+ ++DL+V+  G   +L ++L  F  +E L  +NKY C  C
Sbjct:   253 GYLRQQILCSVCKKPSNTYQALLDLSVDAKGS--SLADSLKHFVHAEKLTKQNKYRCENC 310

Query:   147 KSYEKAKKKLTVLEEPNILTIVLKRFESGNF--GKLNKSVWFPEVLNMAPYMSRTGDGSP 204
             K    A K++T+   PNILTI  KRF    F   K++K + +PE  N+ PYMS   + S 
Sbjct:   311 KQLVDASKQMTIYRAPNILTIHFKRFTFNGFQSSKISKQISYPESFNLGPYMSDP-NCSC 369

Query:   205 MYSLYAVVVHLDVTNATFSGHYVCYVKNSHEEWFRIDDSTVIPVKLERVLSEEAYMLLYA 264
              Y L  V+VH     +T SGHY  + K+S+  W + DD  V    ++RVL+++AY+L Y 
Sbjct:   370 WYELIGVLVHAG--GSTRSGHYYSFCKSSNGVWLKFDDDFVSNSSIDRVLNQQAYILQYK 427

Query:   265 RHS 267
             R S
Sbjct:   428 RKS 430


>UNIPROTKB|Q6QN14 [details] [associations]
            symbol:USP17L6 "Ubiquitin carboxyl-terminal hydrolase
            17-like protein 6" species:9606 "Homo sapiens" [GO:0004221
            "ubiquitin thiolesterase activity" evidence=IEA] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA]
            [GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm"
            evidence=IEA] InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443
            PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 GO:GO:0005634
            GO:GO:0005737 GO:GO:0008234 GO:GO:0006511 GO:GO:0004221
            eggNOG:COG5533 EMBL:AC116655 HSSP:P54578 HOGENOM:HOG000144638
            HOVERGEN:HBG007129 OrthoDB:EOG42V8G0 EMBL:AY533200 IPI:IPI00740629
            UniGene:Hs.722658 ProteinModelPortal:Q6QN14 SMR:Q6QN14
            STRING:Q6QN14 DMDM:187663985 UCSC:uc011bws.2 H-InvDB:HIX0031631
            H-InvDB:HIX0163956 H-InvDB:HIX0163957 H-InvDB:HIX0163958
            H-InvDB:HIX0163959 H-InvDB:HIX0163960 H-InvDB:HIX0163961
            H-InvDB:HIX0163962 H-InvDB:HIX0163963 H-InvDB:HIX0164023
            neXtProt:NX_Q6QN14 InParanoid:Q6QN14 Genevestigator:Q6QN14
            Uniprot:Q6QN14
        Length = 398

 Score = 437 (158.9 bits), Expect = 3.6e-41, P = 3.6e-41
 Identities = 92/242 (38%), Positives = 138/242 (57%)

Query:    26 SPIGILSKIQKIGSHLGHGREEDAHEFLRCAVDTMQSVCLKEFGAKGKIAEETTLIGLTF 85
             +P  ++   Q + +    G++EDAHEFL   VD M+  CL         +++TTLI   F
Sbjct:   138 NPGHVIQPSQALAAGFHRGKQEDAHEFLMFTVDAMKKACLPGHKQVDHHSKDTTLIHQIF 197

Query:    86 GGYLRSKIKCLKCLGKSELYERMMDLTVEIDGDIGTLEEALAQFTASEILVGENKYYCSR 145
             GGY RS+IKCL C G S+ ++  +D+ ++I     ++++AL Q    E L GEN Y+C  
Sbjct:   198 GGYWRSQIKCLHCHGISDTFDPYLDIALDIQA-AQSVQQALEQLVKPEELNGENAYHCGV 256

Query:   146 CKSYEKAKKKLTVLEEPNILTIVLKRFESGNFGKLNKSVWFPEVLNMAPYMSRTGDGSPM 205
             C     A K LT+     +L +VLKRF      K+ K+V +PE L+M PYMS+   G  +
Sbjct:   257 CLQRAPASKTLTLHTSAKVLILVLKRFSDVTGNKIAKNVQYPECLDMQPYMSQQNTGPLV 316

Query:   206 YSLYAVVVHLDVTNATFSGHYVCYVKNSHEEWFRIDDSTVIPVKLERVLSEEAYMLLYAR 265
             Y LYAV+VH   +    +GHY  YVK    +W+++DD+ V    +  VLS++AY+L Y +
Sbjct:   317 YVLYAVLVHAGWS--CHNGHYFSYVKAQEGQWYKMDDAEVTASSITSVLSQQAYVLFYIQ 374

Query:   266 HS 267
              S
Sbjct:   375 KS 376


>UNIPROTKB|E2R2N1 [details] [associations]
            symbol:LOC609437 "Ubiquitin carboxyl-terminal hydrolase"
            species:9615 "Canis lupus familiaris" [GO:0008234 "cysteine-type
            peptidase activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent
            protein catabolic process" evidence=IEA] [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 Pfam:PF04774 GO:GO:0008234 GO:GO:0006511
            GO:GO:0004221 InterPro:IPR006861 GeneTree:ENSGT00670000097591
            EMBL:AAEX03010567 Ensembl:ENSCAFT00000013563
            Ensembl:ENSCAFT00000024077 OMA:CQGVSDT Uniprot:E2R2N1
        Length = 534

 Score = 433 (157.5 bits), Expect = 9.6e-41, P = 9.6e-41
 Identities = 99/290 (34%), Positives = 157/290 (54%)

Query:    45 REEDAHEFLRCAVDTMQSVCLKEFGAKG-KIAEETTLIGLTFGGYLRSKIKCLKCLGKSE 103
             ++EDAHE+L   +D MQ  CL E      +  +++TLI   FGGY RS+I+CL C G S 
Sbjct:   157 KQEDAHEYLMFILDAMQQACLPEDKLSDPECPQDSTLIQQLFGGYWRSQIQCLHCQGISS 216

Query:   104 LYERMMDLTVEIDGDIGTLEEALAQFTASEILVGENKYYCSRCKSYEKAKKKLTVLEEPN 163
               E  +D++++I GD  ++ +AL Q    E+L GEN Y+CS+C     A K LT+   P 
Sbjct:   217 TLEPYLDISLDI-GDAHSVSQALEQLVKPELLEGENAYHCSKCLEKVPASKVLTLHTSPK 275

Query:   164 ILTIVLKRFESGNFGKLNKSVWFPEVLNMAPYMSRTGDGSPMYSLYAVVVHLDVTNATFS 223
             +L +VL+RF      K+ K V +PE L+M  Y+S    G  +Y LYAV+VH     +  S
Sbjct:   276 VLILVLRRFSDLTGNKMTKEVQYPERLDMQHYLSEQRAGPLVYVLYAVLVHAG--RSCHS 333

Query:   224 GHYVCYVKNSHEEWFRIDDSTVIPVKLERVLSEEAYMLLYARHSPRPPALIRNNVSHG-V 282
             GHY C+VK  + +W+++DD+ V    +   L + AY+L Y + +     L R +V  G +
Sbjct:   334 GHYFCFVKAGNGQWYKMDDAKVSACDVTCALRQPAYVLFYMQKTDLERDLGRESVKEGGL 393

Query:   283 KSKKKNLEAV-DLNNTSKIRSNSYIPSLDSKAQQKPCTDSNQLFDRDEWK 331
              S + +   V + +       +  +P L+ + ++     S Q    D+W+
Sbjct:   394 ASPEADPTVVGEASGEPATDPSVNLPELEERGEET----SRQQMTLDQWR 439


>UNIPROTKB|A6NCW0 [details] [associations]
            symbol:USP17L3 "Ubiquitin carboxyl-terminal hydrolase
            17-like protein 3" species:9606 "Homo sapiens" [GO:0004221
            "ubiquitin thiolesterase activity" evidence=IEA] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA]
            [GO:0006915 "apoptotic process" evidence=IEA] [GO:0008234
            "cysteine-type peptidase activity" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
            evidence=IEA] InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443
            PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 Pfam:PF04774
            GO:GO:0005634 GO:GO:0006915 GO:GO:0008234 GO:GO:0006511
            GO:GO:0004221 InterPro:IPR006861 EMBL:AC130365 HPA:HPA045642
            HOGENOM:HOG000144638 HOVERGEN:HBG007129 OrthoDB:EOG42V8G0
            IPI:IPI00736169 RefSeq:NP_001243800.1 UniGene:Hs.741131
            ProteinModelPortal:A6NCW0 SMR:A6NCW0 STRING:A6NCW0 PRIDE:A6NCW0
            GeneID:645836 KEGG:hsa:645836 CTD:645836 GeneCards:GC08M007833
            HGNC:HGNC:37175 neXtProt:NX_A6NCW0 InParanoid:A6NCW0
            PhylomeDB:A6NCW0 GenomeRNAi:645836 NextBio:118020
            Genevestigator:A6NCW0 Uniprot:A6NCW0
        Length = 530

 Score = 432 (157.1 bits), Expect = 1.2e-40, P = 1.2e-40
 Identities = 107/315 (33%), Positives = 159/315 (50%)

Query:    26 SPIGILSKIQKIGSHLGHGREEDAHEFLRCAVDTMQSVCLKEFGAKGKIAEETTLIGLTF 85
             SP  ++   Q + S    G++ED HEFL   VD M+  CL         +++TTLI   F
Sbjct:   138 SPGHVIQPSQALASGFHRGKQEDVHEFLMFTVDAMKKACLPGHKQVDHHSKDTTLIHQIF 197

Query:    86 GGYLRSKIKCLKCLGKSELYERMMDLTVEIDGDIGTLEEALAQFTASEILVGENKYYCSR 145
             GG  RS+IKCL C G S+ ++  +D+ ++I     ++++AL Q    E L GEN Y+C  
Sbjct:   198 GGCWRSQIKCLHCHGISDTFDPYLDIALDIQA-AQSVKQALEQLVKPEELNGENAYHCGL 256

Query:   146 CKSYEKAKKKLTVLEEPNILTIVLKRFESGNFGKLNKSVWFPEVLNMAPYMSRTGDGSPM 205
             C     A   LT+     +L +VLKRF      KL K+V +PE L+M PYMS+   G  +
Sbjct:   257 CLQRAPASNTLTLHTSAKVLILVLKRFSDVAGNKLAKNVQYPECLDMQPYMSQQNTGPLV 316

Query:   206 YSLYAVVVHLDVTNATFSGHYVCYVKNSHEEWFRIDDSTVIPVKLERVLSEEAYMLLYAR 265
             Y LYAV+VH   +     GHY  YVK    +W+++DD+ V    +  VLS++AY+L Y +
Sbjct:   317 YVLYAVLVHAGWS--CHDGHYFSYVKAQEGQWYKMDDAEVTVCSITSVLSQQAYVLFYIQ 374

Query:   266 HSPRPPALIRNNVSHGVKSKKKNLEAVDLN-NTSKIRSNS---YIPSLDSKAQQKPCTDS 321
              S         +VS G + +    E  D      +++ +      P LD    ++  T  
Sbjct:   375 KSEWERH--SESVSRGREPRALGAEDTDRRAKQGELKRDHPCLQAPELDEHLVER-ATQE 431

Query:   322 NQLFDRDEWKFRSMQ 336
             + L   D WKF   Q
Sbjct:   432 STL---DHWKFLQEQ 443


>UNIPROTKB|A6NCW7 [details] [associations]
            symbol:USP17L4 "Inactive ubiquitin carboxyl-terminal
            hydrolase 17-like protein 4" species:9606 "Homo sapiens"
            [GO:0004221 "ubiquitin thiolesterase activity" evidence=IEA]
            [GO:0006511 "ubiquitin-dependent protein catabolic process"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005783
            "endoplasmic reticulum" evidence=IEA] InterPro:IPR001394
            Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235
            GO:GO:0005634 GO:GO:0006511 GO:GO:0004221 EMBL:AC130360
            HPA:HPA045642 HOGENOM:HOG000144638 HOVERGEN:HBG007129
            OrthoDB:EOG42V8G0 IPI:IPI00739049 RefSeq:NP_001243803.1
            UniGene:Hs.741134 ProteinModelPortal:A6NCW7 SMR:A6NCW7
            STRING:A6NCW7 PhosphoSite:A6NCW7 PRIDE:A6NCW7 GeneID:645402
            KEGG:hsa:645402 CTD:645402 GeneCards:GC08P007194 HGNC:HGNC:37176
            neXtProt:NX_A6NCW7 InParanoid:A6NCW7 GenomeRNAi:645402
            NextBio:117471 Genevestigator:A6NCW7 Uniprot:A6NCW7
        Length = 530

 Score = 431 (156.8 bits), Expect = 1.6e-40, P = 1.6e-40
 Identities = 106/315 (33%), Positives = 162/315 (51%)

Query:    26 SPIGILSKIQKIGSHLGHGREEDAHEFLRCAVDTMQSVCLKEFGAKGKIAEETTLIGLTF 85
             SP  ++   Q + +    G++ED HEFL   VD M+  CL         +++TTLI   F
Sbjct:   138 SPGHVIQPSQALAAGFHRGKQEDVHEFLMFTVDAMKKACLPGHKQVDHHSKDTTLIHQIF 197

Query:    86 GGYLRSKIKCLKCLGKSELYERMMDLTVEIDGDIGTLEEALAQFTASEILVGENKYYCSR 145
             GG  RS+IKCL C G S+ ++  +D+ ++I     ++++AL Q    E L GEN Y+C  
Sbjct:   198 GGCWRSQIKCLHCHGISDTFDPYLDIALDIQA-AQSVKQALEQLVKPEELNGENAYHCGL 256

Query:   146 CKSYEKAKKKLTVLEEPNILTIVLKRFESGNFGKLNKSVWFPEVLNMAPYMSRTGDGSPM 205
             C     A   LT+     +L +VLKRF      KL K+V +PE L+M PYMS+   G  +
Sbjct:   257 CLQRAPASNTLTLHTSAKVLILVLKRFSDVAGNKLAKNVQYPECLDMQPYMSQQNTGPLV 316

Query:   206 YSLYAVVVHLDVTNATFSGHYVCYVKNSHEEWFRIDDSTVIPVKLERVLSEEAYMLLYAR 265
             Y LYAV+VH   +     G+Y  YVK    +W+++DD+ V    +  VLS++AY+L Y +
Sbjct:   317 YVLYAVLVHAGWS--CHDGYYFSYVKAQEGQWYKMDDAEVTVCSITSVLSQQAYVLFYIQ 374

Query:   266 HSPRPPALIRNNVSHGVKSKKKNLEAVDLNNTS-KIRSNS---YIPSLDSKAQQKPCTDS 321
              S         +VS G + +    E  D   T  +++ +     +P LD    ++  T+ 
Sbjct:   375 KSEWERH--SESVSRGREPRALGAEDTDRPATQGELKRDHPCLQVPELDEHLVER-ATEE 431

Query:   322 NQLFDRDEWKFRSMQ 336
             + L   D WKF   Q
Sbjct:   432 STL---DHWKFPQEQ 443


>UNIPROTKB|P0C7I0 [details] [associations]
            symbol:USP17L8 "Inactive ubiquitin carboxyl-terminal
            hydrolase 17-like protein 8" species:9606 "Homo sapiens"
            [GO:0004221 "ubiquitin thiolesterase activity" evidence=IEA]
            [GO:0006511 "ubiquitin-dependent protein catabolic process"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005783
            "endoplasmic reticulum" evidence=IEA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 GO:GO:0005634 GO:GO:0006511 GO:GO:0004221
            eggNOG:COG5533 EMBL:AC130365 HPA:HPA045642 HOGENOM:HOG000144638
            HOVERGEN:HBG007129 OrthoDB:EOG42V8G0 IPI:IPI00398228
            RefSeq:NP_001243801.1 UniGene:Hs.741135 ProteinModelPortal:P0C7I0
            SMR:P0C7I0 STRING:P0C7I0 PhosphoSite:P0C7I0 DMDM:187653909
            PRIDE:P0C7I0 GeneID:392188 KEGG:hsa:392188 CTD:392188
            GeneCards:GC08M007831 HGNC:HGNC:37181 neXtProt:NX_P0C7I0
            InParanoid:P0C7I0 GenomeRNAi:392188 NextBio:104978
            Genevestigator:P0C7I0 Uniprot:P0C7I0
        Length = 530

 Score = 430 (156.4 bits), Expect = 2.0e-40, P = 2.0e-40
 Identities = 107/315 (33%), Positives = 163/315 (51%)

Query:    26 SPIGILSKIQKIGSHLGHGREEDAHEFLRCAVDTMQSVCLKEFGAKGKIAEETTLIGLTF 85
             SP  ++   Q + +    G++EDAHEFL   VD M+  CL         +++TTLI   F
Sbjct:   138 SPGHVIQPSQALAAGFHRGKQEDAHEFLMFTVDAMKKACLPGHKQVDHHSKDTTLIHQIF 197

Query:    86 GGYLRSKIKCLKCLGKSELYERMMDLTVEIDGDIGTLEEALAQFTASEILVGENKYYCSR 145
             GG  RS+IKCL C G S+ ++  +D+ ++I     ++++AL Q    E L GEN Y C  
Sbjct:   198 GGCWRSQIKCLHCHGISDTFDPYLDIALDIQA-AQSVKQALEQLVKPEELNGENAYPCGL 256

Query:   146 CKSYEKAKKKLTVLEEPNILTIVLKRFESGNFGKLNKSVWFPEVLNMAPYMSRTGDGSPM 205
             C     A   LT+     +L +VLKRF      KL K+V +PE L+M PYMS+   G  +
Sbjct:   257 CLQRAPASNTLTLHTSAKVLILVLKRFCDVTGNKLAKNVQYPECLDMQPYMSQQNTGPLV 316

Query:   206 YSLYAVVVHLDVTNATFSGHYVCYVKNSHEEWFRIDDSTVIPVKLERVLSEEAYMLLYAR 265
             Y LYAV+VH   +    +G+Y  YVK    +W+++DD+ V    +  VLS++AY+L Y +
Sbjct:   317 YVLYAVLVHAGWS--CHNGYYFSYVKAQEGQWYKMDDAEVTACSITSVLSQQAYVLFYIQ 374

Query:   266 HSPRPPALIRNNVSHGVKSKKKNLEAVDLNNTS-KIRSNS---YIPSLDSKAQQKPCTDS 321
              S         +VS G + +    E  D   T  +++ +     +P LD    ++  T+ 
Sbjct:   375 KSEWERH--SESVSRGREPRALGAEDTDRPATQGELKRDHPCLQVPELDEHLVER-ATEE 431

Query:   322 NQLFDRDEWKFRSMQ 336
             + L   D WKF   Q
Sbjct:   432 STL---DHWKFPQEQ 443


>TAIR|locus:2090985 [details] [associations]
            symbol:UBP25 "ubiquitin-specific protease 25"
            species:3702 "Arabidopsis thaliana" [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] [GO:0004843
            "ubiquitin-specific protease activity" evidence=ISS] [GO:0005634
            "nucleus" evidence=ISM] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 EMBL:CP002686 GenomeReviews:BA000014_GR
            GO:GO:0008234 GO:GO:0006511 EMBL:AB022220 GO:GO:0004221
            eggNOG:COG5077 HSSP:P54578 KO:K11855 EMBL:AF302673 EMBL:AY064992
            EMBL:BT021128 IPI:IPI00539796 RefSeq:NP_566486.1 UniGene:At.6074
            ProteinModelPortal:Q9FPS2 SMR:Q9FPS2 IntAct:Q9FPS2 MEROPS:C19.A13
            PRIDE:Q9FPS2 EnsemblPlants:AT3G14400.1 GeneID:820662
            KEGG:ath:AT3G14400 TAIR:At3g14400 HOGENOM:HOG000084095
            InParanoid:Q9FPS2 OMA:SEKAYIL PhylomeDB:Q9FPS2
            ProtClustDB:CLSN2688374 Genevestigator:Q9FPS2 Uniprot:Q9FPS2
        Length = 661

 Score = 431 (156.8 bits), Expect = 3.6e-40, P = 3.6e-40
 Identities = 101/268 (37%), Positives = 157/268 (58%)

Query:    26 SPIGILSKIQKIGSHLGHGREEDAHEFLRCAVDTMQ--SVCLKEFGAKGKIA-EETTLIG 82
             +P  I S ++    H   GR+EDAHEFLR  +D     S+ LK+    G       +++ 
Sbjct:    94 APNKISSCLKIFAEHFKLGRQEDAHEFLRYVIDACHNTSLRLKKLRYNGNEPFNGNSVVK 153

Query:    83 LTFGGYLRSKIKCLKCLGKSELYERMMDLTVEIDGDIGTLEEALAQFTASEILVGENKYY 142
               FGG L+S++KCL C  +S   + +MD+++EI     +++E+L +F  SEIL G NKY 
Sbjct:   154 EIFGGALQSQVKCLSCGAESNKADEIMDISLEILQS-SSVKESLQKFFQSEILDGNNKYR 212

Query:   143 CSRCKSYEKAKKKLTVLEEPNILTIVLKRFESGNFG-KLNKSVWFPEVLNMAPYMSRTG- 200
             C  C+    A+K++++L+ PNIL I LKRF  G FG K++K++ F E+L ++ +MS+   
Sbjct:   213 CESCEKLVTARKQMSILQAPNILVIQLKRF-GGIFGGKIDKAISFGEILVLSNFMSKASK 271

Query:   201 DGSPMYSLYAVVVHLDVTNATFSGHYVCYVKNSHEEWFRIDDSTVIPVKLERVLSEEAYM 260
             D  P Y L+ ++VH   +    SGHY  YVK+S   W+  +DS V    L+ VLSE+AY+
Sbjct:   272 DPQPEYKLFGIIVHSGFSPE--SGHYYAYVKDSLGRWYCCNDSFVSLSTLQEVLSEKAYI 329

Query:   261 LLYARHSPRPPALIRNNVSHGVKSKKKN 288
             L ++R + RP +      S+G  S + N
Sbjct:   330 LFFSRSNQRPASAKTLVTSNGTTSHEVN 357


>UNIPROTKB|Q7RTZ2 [details] [associations]
            symbol:USP17L1P "Putative ubiquitin carboxyl-terminal
            hydrolase 17-like protein 1" species:9606 "Homo sapiens"
            [GO:0004221 "ubiquitin thiolesterase activity" evidence=IEA]
            [GO:0006511 "ubiquitin-dependent protein catabolic process"
            evidence=IEA] [GO:0006915 "apoptotic process" evidence=IEA]
            [GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0005783 "endoplasmic
            reticulum" evidence=IEA] InterPro:IPR001394 InterPro:IPR018200
            Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235
            Pfam:PF04774 GO:GO:0006915 GO:GO:0005730 GO:GO:0008234
            GO:GO:0006511 GO:GO:0004221 eggNOG:COG5533 EMBL:AF228730
            InterPro:IPR006861 HSSP:P54578 EMBL:BN000116 IPI:IPI00394951
            RefSeq:NP_001243802.1 UniGene:Hs.653091 ProteinModelPortal:Q7RTZ2
            SMR:Q7RTZ2 STRING:Q7RTZ2 MEROPS:C19.078 DMDM:74723224 PaxDb:Q7RTZ2
            PRIDE:Q7RTZ2 GeneID:401447 KEGG:hsa:401447 CTD:401447
            GeneCards:GC08P007190 HGNC:HGNC:37182 HPA:HPA045642
            neXtProt:NX_Q7RTZ2 HOGENOM:HOG000144638 HOVERGEN:HBG007129
            InParanoid:Q7RTZ2 OrthoDB:EOG42V8G0 GenomeRNAi:401447
            Genevestigator:Q7RTZ2 Uniprot:Q7RTZ2
        Length = 530

 Score = 426 (155.0 bits), Expect = 5.3e-40, P = 5.3e-40
 Identities = 106/315 (33%), Positives = 158/315 (50%)

Query:    26 SPIGILSKIQKIGSHLGHGREEDAHEFLRCAVDTMQSVCLKEFGAKGKIAEETTLIGLTF 85
             SP  ++   Q + +    G++ED HEFL   VD M+  CL          ++TTLI   F
Sbjct:   138 SPGHVIQPSQALAAGFHRGKQEDVHEFLMFTVDAMKKACLPGHKQVDHHCKDTTLIHQIF 197

Query:    86 GGYLRSKIKCLKCLGKSELYERMMDLTVEIDGDIGTLEEALAQFTASEILVGENKYYCSR 145
             GG  RS+IKCL C G S+ ++  +D+ ++I     ++++AL Q    E L GEN Y+C  
Sbjct:   198 GGCWRSQIKCLHCHGISDTFDPYLDIALDIQA-AQSVKQALEQLVKPEELNGENAYHCGL 256

Query:   146 CKSYEKAKKKLTVLEEPNILTIVLKRFESGNFGKLNKSVWFPEVLNMAPYMSRTGDGSPM 205
             C     A   LT+     +L +VLKRF      KL K+V +PE L+M PYMS+   G  +
Sbjct:   257 CLQRAPASNTLTLHTSAKVLILVLKRFSDVAGNKLAKNVQYPECLDMQPYMSQQNTGPLV 316

Query:   206 YSLYAVVVHLDVTNATFSGHYVCYVKNSHEEWFRIDDSTVIPVKLERVLSEEAYMLLYAR 265
             Y LYAV+VH   +     GHY  YVK    +W+++DD+ V    +  VLS++AY+L Y +
Sbjct:   317 YVLYAVLVHAGWS--CHDGHYFSYVKAQEVQWYKMDDAEVTVCSIISVLSQQAYVLFYIQ 374

Query:   266 HSPRPPALIRNNVSHGVKSKKKNLEAVDLN-NTSKIRSNS---YIPSLDSKAQQKPCTDS 321
              S         +VS G + +    E  D      +++ +      P LD    ++  T  
Sbjct:   375 KSEWERH--SESVSRGREPRALGAEDTDRRAKQGELKRDHPCLQAPELDEHLVER-ATQE 431

Query:   322 NQLFDRDEWKFRSMQ 336
             + L   D WKF   Q
Sbjct:   432 STL---DHWKFLQEQ 443


>MGI|MGI:107699 [details] [associations]
            symbol:Usp17la "ubiquitin specific peptidase 17-like A"
            species:10090 "Mus musculus" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0004843 "ubiquitin-specific protease
            activity" evidence=IDA] [GO:0006508 "proteolysis" evidence=IEA]
            [GO:0006511 "ubiquitin-dependent protein catabolic process"
            evidence=IEA] [GO:0008233 "peptidase activity" evidence=IEA]
            [GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
            [GO:0016579 "protein deubiquitination" evidence=IDA] [GO:0016787
            "hydrolase activity" evidence=IEA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 MGI:MGI:107699 GO:GO:0006511 GO:GO:0004843
            GO:GO:0016579 GO:GO:0004221 eggNOG:COG5533 HOGENOM:HOG000144638
            HOVERGEN:HBG007129 KO:K11845 GeneTree:ENSGT00670000097591
            EMBL:U41636 IPI:IPI00117061 PIR:JC6133 RefSeq:NP_031913.1
            UniGene:Mm.389929 ProteinModelPortal:Q61068 SMR:Q61068
            STRING:Q61068 MEROPS:C19.031 PRIDE:Q61068
            Ensembl:ENSMUST00000067695 GeneID:13531 KEGG:mmu:13531
            UCSC:uc009iwz.2 CTD:13531 InParanoid:Q61068 NextBio:284126
            Bgee:Q61068 CleanEx:MM_DUB1 Genevestigator:Q61068
            GermOnline:ENSMUSG00000054568 Uniprot:Q61068
        Length = 526

 Score = 425 (154.7 bits), Expect = 6.8e-40, P = 6.8e-40
 Identities = 87/223 (39%), Positives = 133/223 (59%)

Query:    45 REEDAHEFLRCAVDTMQSVCLKEFGAKGKIAEETTLIGLTFGGYLRSKIKCLKCLGKSEL 104
             ++EDAHEFL   ++TM   CL+        +E+++ I   FGG+ RS+IKCL C G S+ 
Sbjct:   130 QQEDAHEFLMFTLETMHESCLQVHRQSKPTSEDSSPIHDIFGGWWRSQIKCLLCQGTSDT 189

Query:   105 YERMMDLTVEIDGDIGTLEEALAQFTASEILVGENKYYCSRCKSYEKAKKKLTVLEEPNI 164
             Y+R +D+ ++I     ++++AL     SE L G+N YYC +C+    A K L V   P +
Sbjct:   190 YDRFLDIPLDISS-AQSVKQALWDTEKSEELCGDNAYYCGKCRQKMPASKTLHVHIAPKV 248

Query:   165 LTIVLKRFESGNFGKLNKSVWFPEVLNMAPYMSRTGDGSPMYSLYAVVVHLDVTNATFSG 224
             L +VL RF +    KL++ V +PE L++ PY+S    G   Y+LYAV+VH   T+   SG
Sbjct:   249 LMVVLNRFSAFTGNKLDRKVSYPEFLDLKPYLSEPTGGPLPYALYAVLVHDGATS--HSG 306

Query:   225 HYVCYVKNSHEEWFRIDDSTVIPVKLERVLSEEAYMLLYARHS 267
             HY C VK  H +W+++DD+ V    +  VL+E AY+L Y + +
Sbjct:   307 HYFCCVKAGHGKWYKMDDTKVTRCDVTSVLNENAYVLFYVQQA 349


>UNIPROTKB|J9PAN5 [details] [associations]
            symbol:LOC609268 "Ubiquitin carboxyl-terminal hydrolase"
            species:9615 "Canis lupus familiaris" [GO:0008234 "cysteine-type
            peptidase activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent
            protein catabolic process" evidence=IEA] [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 Pfam:PF04774 GO:GO:0008234 GO:GO:0006511
            GO:GO:0004221 InterPro:IPR006861 OMA:EQLMKPE
            GeneTree:ENSGT00670000097591 EMBL:AAEX03010544
            Ensembl:ENSCAFT00000039099 Uniprot:J9PAN5
        Length = 531

 Score = 422 (153.6 bits), Expect = 1.4e-39, P = 1.4e-39
 Identities = 98/290 (33%), Positives = 155/290 (53%)

Query:    45 REEDAHEFLRCAVDTMQSVCLKEFGAKG-KIAEETTLIGLTFGGYLRSKIKCLKCLGKSE 103
             ++EDAHE+L   +D MQ  CL E      +  +++TLI   FGGY RS+I+CL C G S 
Sbjct:   157 KQEDAHEYLMFILDAMQQACLPEDKLSDPECPQDSTLIQQLFGGYWRSQIQCLHCQGISS 216

Query:   104 LYERMMDLTVEIDGDIGTLEEALAQFTASEILVGENKYYCSRCKSYEKAKKKLTVLEEPN 163
               E  +D++++I G   ++ +AL Q    E+L GEN Y+CS+C     A K LT+   P 
Sbjct:   217 TLEPYLDISLDI-GAAHSISQALEQLMKPELLEGENAYHCSKCLEKVPASKVLTLHTSPK 275

Query:   164 ILTIVLKRFESGNFGKLNKSVWFPEVLNMAPYMSRTGDGSPMYSLYAVVVHLDVTNATFS 223
             +L +VL+RF      K+ K V +PE L+M  Y+S    G  +Y LYAV+VH     +  S
Sbjct:   276 VLILVLRRFSDLTGNKMTKEVQYPERLDMQHYLSEQRAGPLVYVLYAVLVHAG--RSCHS 333

Query:   224 GHYVCYVKNSHEEWFRIDDSTVIPVKLERVLSEEAYMLLYARHSPRPPALIRNNVSHG-V 282
             GHY C+VK  + +W+++DD+ V    +   L + AY+L Y + +     L R +V  G +
Sbjct:   334 GHYFCFVKAGNGQWYKMDDAKVSACDVTCALRQPAYVLFYMQKTDLERDLGRESVEEGGL 393

Query:   283 KSKKKNLEAV-DLNNTSKIRSNSYIPSLDSKAQQKPCTDSNQLFDRDEWK 331
              S + +   V + +       +   P L+ + ++     S Q    D+W+
Sbjct:   394 ASPEADPTVVGEASGEPATDPSGNHPELEERGEET----SRQQMTLDQWR 439


>UNIPROTKB|P0C7H9 [details] [associations]
            symbol:USP17L7 "Inactive ubiquitin carboxyl-terminal
            hydrolase 17-like protein 7" species:9606 "Homo sapiens"
            [GO:0004221 "ubiquitin thiolesterase activity" evidence=IEA]
            [GO:0006511 "ubiquitin-dependent protein catabolic process"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005783
            "endoplasmic reticulum" evidence=IEA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 Pfam:PF04774 GO:GO:0005634 GO:GO:0006511
            GO:GO:0004221 eggNOG:COG5533 EMBL:AC130366 InterPro:IPR006861
            HPA:HPA045642 HOGENOM:HOG000144638 HOVERGEN:HBG007129
            OrthoDB:EOG42V8G0 IPI:IPI00398229 RefSeq:NP_001243798.1
            UniGene:Hs.741132 ProteinModelPortal:P0C7H9 SMR:P0C7H9
            IntAct:P0C7H9 STRING:P0C7H9 DMDM:187653908 PRIDE:P0C7H9
            GeneID:392197 KEGG:hsa:392197 CTD:392197 GeneCards:GC08M011990
            HGNC:HGNC:37180 neXtProt:NX_P0C7H9 InParanoid:P0C7H9
            GenomeRNAi:392197 NextBio:104989 Genevestigator:P0C7H9
            Uniprot:P0C7H9
        Length = 530

 Score = 421 (153.3 bits), Expect = 1.8e-39, P = 1.8e-39
 Identities = 105/315 (33%), Positives = 161/315 (51%)

Query:    26 SPIGILSKIQKIGSHLGHGREEDAHEFLRCAVDTMQSVCLKEFGAKGKIAEETTLIGLTF 85
             SP  ++   Q + +    G +EDAHEFL   VD M+  CL         +++TTLI   F
Sbjct:   138 SPGHVIQPSQVLAAGFHRGEQEDAHEFLMFTVDAMKKACLPGHKQLDHHSKDTTLIHQIF 197

Query:    86 GGYLRSKIKCLKCLGKSELYERMMDLTVEIDGDIGTLEEALAQFTASEILVGENKYYCSR 145
             G Y RS+IK L C G S+ ++  +D+ ++I     ++++AL Q    + L GEN Y+C  
Sbjct:   198 GAYWRSQIKYLHCHGVSDTFDPYLDIALDIQA-AQSVKQALEQLVKPKELNGENAYHCGL 256

Query:   146 CKSYEKAKKKLTVLEEPNILTIVLKRFESGNFGKLNKSVWFPEVLNMAPYMSRTGDGSPM 205
             C     A K LT+     +L +VLKRF      KL K+V +P+  +M PYMS+   G  +
Sbjct:   257 CLQKAPASKTLTLPTSAKVLILVLKRFSDVTGNKLAKNVQYPKCRDMQPYMSQQNTGPLV 316

Query:   206 YSLYAVVVHLDVTNATFSGHYVCYVKNSHEEWFRIDDSTVIPVKLERVLSEEAYMLLYAR 265
             Y LYAV+VH   +    +GHY  YVK    +W+++DD+ V    +  VLS++AY+L Y +
Sbjct:   317 YVLYAVLVHAGWS--CHNGHYFSYVKAQEGQWYKMDDAEVTASGITSVLSQQAYVLFYIQ 374

Query:   266 HSPRPPALIRNNVSHGVKSKKKNLEAVDLNNTS-KIRSNS---YIPSLDSKAQQKPCTDS 321
              S         +VS G + +    E  D   T  +++ +     +P LD    ++  T  
Sbjct:   375 KSEWERH--SESVSRGREPRALGAEDTDRPATQGELKRDHPCLQVPELDEHLVER-ATQE 431

Query:   322 NQLFDRDEWKFRSMQ 336
             + L   D WKF   Q
Sbjct:   432 STL---DHWKFPQEQ 443


>RGD|1562061 [details] [associations]
            symbol:Usp17l5 "ubiquitin specific peptidase 17-like 5"
            species:10116 "Rattus norvegicus" [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA]
            [GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
            InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 RGD:1562061 RGD:1565607
            GO:GO:0008234 GO:GO:0006511 GO:GO:0004221
            GeneTree:ENSGT00670000097591 EMBL:AC130613 IPI:IPI00359152
            Ensembl:ENSRNOT00000023213 Uniprot:F1M413
        Length = 504

 Score = 417 (151.9 bits), Expect = 4.8e-39, P = 4.8e-39
 Identities = 97/258 (37%), Positives = 146/258 (56%)

Query:    29 GILSKIQKIGSHLGHGREEDAHEFLRCAVDTMQSVCLKEFGAKGKIAEETTLIGLTFGGY 88
             G++   + + S     R+EDAHEFL   ++TM   CL+        +++++LI   FGG 
Sbjct:   114 GVMKPSEILTSTFHKHRQEDAHEFLMFTLNTMHESCLRGCKQSETTSKDSSLIYDIFGGQ 173

Query:    89 LRSKIKCLKCLGKSELYERMMDLTVEIDGDIGTLEEALAQFTASEILVGENKYYCSRCKS 148
             +RS+IKC  C G  + Y+  ++L ++I     ++++AL      E L G+N YYC RC+ 
Sbjct:   174 MRSQIKCHHCQGTLDSYDPFLNLFLDICS-AQSVKQALEDLVKVEELQGDNAYYCGRCRE 232

Query:   149 YEKAKKKLTVLEEPNILTIVLKRFESGNFG--KLNKSVWFPEVLNMAPYMSRTGDGSPMY 206
                A K   V     +L +VL R  S +FG  KLN+ V +PE L++ PY+S+   G   Y
Sbjct:   233 KMPASKTTKVQTASKVLLLVLNR--SYDFGGDKLNRVVSYPEYLDLQPYLSQPTAGPLPY 290

Query:   207 SLYAVVVHLDVTNATFSGHYVCYVKNSHEEWFRIDDSTVIPVKLERVLSEEAYMLLYARH 266
             +LYAV+VH  VT +  SGHY CYVK SH +W+++DDS V    +  VLSE AY+L Y + 
Sbjct:   291 ALYAVLVHDGVTCS--SGHYFCYVKASHGKWYKMDDSKVTRCDVSSVLSEPAYLLFYVQQ 348

Query:   267 SPRPPALIRNNVS--HGV 282
             +      +  +V   HGV
Sbjct:   349 TDLEKVNVDVSVGRVHGV 366


>RGD|1565607 [details] [associations]
            symbol:RGD1565607 "similar to mouse deubiquitinating enzyme 6"
            species:10116 "Rattus norvegicus" [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA]
            [GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
            InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 RGD:1562061 RGD:1565607
            GO:GO:0008234 GO:GO:0006511 GO:GO:0004221
            GeneTree:ENSGT00670000097591 EMBL:AC130613 IPI:IPI00359152
            Ensembl:ENSRNOT00000023213 Uniprot:F1M413
        Length = 504

 Score = 417 (151.9 bits), Expect = 4.8e-39, P = 4.8e-39
 Identities = 97/258 (37%), Positives = 146/258 (56%)

Query:    29 GILSKIQKIGSHLGHGREEDAHEFLRCAVDTMQSVCLKEFGAKGKIAEETTLIGLTFGGY 88
             G++   + + S     R+EDAHEFL   ++TM   CL+        +++++LI   FGG 
Sbjct:   114 GVMKPSEILTSTFHKHRQEDAHEFLMFTLNTMHESCLRGCKQSETTSKDSSLIYDIFGGQ 173

Query:    89 LRSKIKCLKCLGKSELYERMMDLTVEIDGDIGTLEEALAQFTASEILVGENKYYCSRCKS 148
             +RS+IKC  C G  + Y+  ++L ++I     ++++AL      E L G+N YYC RC+ 
Sbjct:   174 MRSQIKCHHCQGTLDSYDPFLNLFLDICS-AQSVKQALEDLVKVEELQGDNAYYCGRCRE 232

Query:   149 YEKAKKKLTVLEEPNILTIVLKRFESGNFG--KLNKSVWFPEVLNMAPYMSRTGDGSPMY 206
                A K   V     +L +VL R  S +FG  KLN+ V +PE L++ PY+S+   G   Y
Sbjct:   233 KMPASKTTKVQTASKVLLLVLNR--SYDFGGDKLNRVVSYPEYLDLQPYLSQPTAGPLPY 290

Query:   207 SLYAVVVHLDVTNATFSGHYVCYVKNSHEEWFRIDDSTVIPVKLERVLSEEAYMLLYARH 266
             +LYAV+VH  VT +  SGHY CYVK SH +W+++DDS V    +  VLSE AY+L Y + 
Sbjct:   291 ALYAVLVHDGVTCS--SGHYFCYVKASHGKWYKMDDSKVTRCDVSSVLSEPAYLLFYVQQ 348

Query:   267 SPRPPALIRNNVS--HGV 282
             +      +  +V   HGV
Sbjct:   349 TDLEKVNVDVSVGRVHGV 366


>UNIPROTKB|J9NSR8 [details] [associations]
            symbol:LOC609310 "Ubiquitin carboxyl-terminal hydrolase"
            species:9615 "Canis lupus familiaris" [GO:0008234 "cysteine-type
            peptidase activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent
            protein catabolic process" evidence=IEA] [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 Pfam:PF04774 GO:GO:0008234 GO:GO:0006511
            GO:GO:0004221 InterPro:IPR006861 GeneTree:ENSGT00670000097591
            OMA:PELEECG EMBL:AAEX03010573 Ensembl:ENSCAFT00000038090
            Uniprot:J9NSR8
        Length = 531

 Score = 413 (150.4 bits), Expect = 1.3e-38, P = 1.3e-38
 Identities = 97/290 (33%), Positives = 154/290 (53%)

Query:    45 REEDAHEFLRCAVDTMQSVCLKEFGAKG-KIAEETTLIGLTFGGYLRSKIKCLKCLGKSE 103
             ++EDAHE+L   +D MQ  CL E      +  +++TLI   F GY RS+I+CL C G S 
Sbjct:   157 KQEDAHEYLMFILDAMQQACLPEDKLSDPERPQDSTLIQQLFEGYWRSQIQCLHCQGISS 216

Query:   104 LYERMMDLTVEIDGDIGTLEEALAQFTASEILVGENKYYCSRCKSYEKAKKKLTVLEEPN 163
               E  +D++++I GD  ++ +AL Q    E+L GEN Y+C +C     A K LT+   P 
Sbjct:   217 TLEPYLDISLDI-GDAHSVSQALEQLVKPELLEGENAYHCRKCLEKVPASKVLTLHTSPK 275

Query:   164 ILTIVLKRFESGNFGKLNKSVWFPEVLNMAPYMSRTGDGSPMYSLYAVVVHLDVTNATFS 223
             +L +VL+RF      K+ K V +PE L+M  Y+S    G  +Y LYAV+VH     +  S
Sbjct:   276 VLILVLRRFSDLTGNKMTKEVQYPERLDMQHYLSEQRAGPLVYVLYAVLVHAG--RSCHS 333

Query:   224 GHYVCYVKNSHEEWFRIDDSTVIPVKLERVLSEEAYMLLYARHSPRPPALIRNNVSHG-V 282
             GHY C+VK  + +W+++DD+ V    +   L + AY+L Y + +     L R +V  G +
Sbjct:   334 GHYFCFVKAGNGQWYKMDDAKVSACDVTCALRQPAYVLFYMQKTDLERDLGRESVKEGGL 393

Query:   283 KSKKKNLEAV-DLNNTSKIRSNSYIPSLDSKAQQKPCTDSNQLFDRDEWK 331
              S + +   V + +       +  +P L+   ++     S Q    D+W+
Sbjct:   394 ASPEADPTVVGEASGEPATDPSVNLPELEECGEET----SRQQMTLDQWR 439


>RGD|1588758 [details] [associations]
            symbol:LOC689730 "similar to ubiquitin specific peptidase 17
            (homolog)" species:10116 "Rattus norvegicus" [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA]
            [GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
            InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 RGD:1588758 GO:GO:0008234
            GO:GO:0006511 GO:GO:0004221 GeneTree:ENSGT00670000097591
            IPI:IPI00557791 Ensembl:ENSRNOT00000042131 Uniprot:F1LVL3
        Length = 523

 Score = 411 (149.7 bits), Expect = 2.1e-38, P = 2.1e-38
 Identities = 96/258 (37%), Positives = 145/258 (56%)

Query:    29 GILSKIQKIGSHLGHGREEDAHEFLRCAVDTMQSVCLKEFGAKGKIAEETTLIGLTFGGY 88
             G++   + + S     R+EDAHEFL   ++ M   CL+        +++++LI   FGG 
Sbjct:   114 GVMKPSEILTSTFHKHRQEDAHEFLMFTLNAMHESCLRGCKQSETSSKDSSLIYDIFGGQ 173

Query:    89 LRSKIKCLKCLGKSELYERMMDLTVEIDGDIGTLEEALAQFTASEILVGENKYYCSRCKS 148
             +RS+IKC  C G  + Y+  ++L ++I     ++++AL      E L G+N YYC RC+ 
Sbjct:   174 MRSQIKCHHCQGTLDSYDPFLNLFLDICS-AQSVKQALEDLVKLEELQGDNAYYCGRCRE 232

Query:   149 YEKAKKKLTVLEEPNILTIVLKRFESGNFG--KLNKSVWFPEVLNMAPYMSRTGDGSPMY 206
                A K   V     +L +VL R  S +FG  KLN+ V +PE L++ PY+S+   G   Y
Sbjct:   233 KMPASKTTKVQTASKVLLLVLNR--SYDFGGDKLNRVVSYPEYLDLQPYLSQPTAGPLPY 290

Query:   207 SLYAVVVHLDVTNATFSGHYVCYVKNSHEEWFRIDDSTVIPVKLERVLSEEAYMLLYARH 266
             +LYAV+VH  VT +  SGHY CYVK SH +W+++DDS V    +  VLSE AY+L Y + 
Sbjct:   291 ALYAVLVHDGVTCS--SGHYFCYVKASHGKWYKMDDSKVTRCDVSSVLSEPAYLLFYVQQ 348

Query:   267 SPRPPALIRNNVS--HGV 282
             +      +  +V   HGV
Sbjct:   349 TDLEKVNVDVSVGRVHGV 366


>TAIR|locus:2174403 [details] [associations]
            symbol:UBP23 "ubiquitin-specific protease 23"
            species:3702 "Arabidopsis thaliana" [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] [GO:0004843
            "ubiquitin-specific protease activity" evidence=ISS] [GO:0005634
            "nucleus" evidence=ISM] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0009165 "nucleotide
            biosynthetic process" evidence=RCA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 EMBL:CP002688 GenomeReviews:BA000015_GR
            GO:GO:0008234 GO:GO:0006511 GO:GO:0004221 EMBL:AB013396
            eggNOG:COG5077 HSSP:P54578 KO:K11855 EMBL:AF302671 IPI:IPI00532960
            RefSeq:NP_568873.1 UniGene:At.22531 ProteinModelPortal:Q9FPS4
            SMR:Q9FPS4 STRING:Q9FPS4 MEROPS:C19.A12 PaxDb:Q9FPS4 PRIDE:Q9FPS4
            EnsemblPlants:AT5G57990.1 GeneID:835910 KEGG:ath:AT5G57990
            GeneFarm:1994 TAIR:At5g57990 HOGENOM:HOG000078724 InParanoid:Q9FPS4
            OMA:AHEYMIN PhylomeDB:Q9FPS4 ProtClustDB:CLSN2716507
            Genevestigator:Q9FPS4 Uniprot:Q9FPS4
        Length = 859

 Score = 416 (151.5 bits), Expect = 5.4e-38, P = 5.4e-38
 Identities = 91/256 (35%), Positives = 153/256 (59%)

Query:    25 VSPIGILSKIQKIGSHLGHGREEDAHEFLRCAVDTMQSVCLKE-FGAKGKIAEETTLIGL 83
             ++P  ++S ++ I  +  + R+EDAHE++   ++ M    L     ++   A   +L+  
Sbjct:   170 LAPKDLVSNLRCISRNFRNCRQEDAHEYMINLLECMHKCSLPSGVPSESSDAYRRSLVHK 229

Query:    84 TFGGYLRSKIKCLKCLGKSELYERMMDLTVEIDGDIGTLEEALAQFTASEILV-GENKYY 142
              FGG LRS++KC +C   S  ++  +DL+++I     +L+ AL++FTA E+L  G   Y 
Sbjct:   230 IFGGSLRSQVKCEQCSHCSNKFDPFLDLSLDIS-KADSLQRALSRFTAVELLDNGAKVYQ 288

Query:   143 CSRCKSYEKAKKKLTVLEEPNILTIVLKRFESGNFGKLNKSVWFPEVLNMAPYMSRTGDG 202
             C RCK   KAKK+LTV + P +LT+ LKRFE+    K+++ V F   ++M P++S   +G
Sbjct:   289 CERCKQKVKAKKQLTVSKAPYVLTVHLKRFEAHRSEKIDRKVDFTSAIDMKPFVSGPHEG 348

Query:   203 SPMYSLYAVVVHLDVTNATFSGHYVCYVKNSHEEWFRIDDSTVIPVKLERVLSEEAYMLL 262
             +  Y+LY V+VH     ++ SGHY C+V+ S   W+ +DD+ V+ V  + V +++AYML 
Sbjct:   349 NLKYTLYGVLVHYG--RSSHSGHYACFVRTSSGMWYSLDDNRVVQVSEKTVFNQKAYMLF 406

Query:   263 YARHSPRPPALIRNNV 278
             Y R   R  A+ +N+V
Sbjct:   407 YVRD--RQNAVPKNSV 420


>UNIPROTKB|K7EMM6 [details] [associations]
            symbol:USP36 "Ubiquitin carboxyl-terminal hydrolase 36"
            species:9606 "Homo sapiens" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00973 PROSITE:PS50235
            EMBL:AC022966 HGNC:HGNC:20062 Ensembl:ENST00000586066
            Uniprot:K7EMM6
        Length = 259

 Score = 401 (146.2 bits), Expect = 2.4e-37, P = 2.4e-37
 Identities = 80/191 (41%), Positives = 121/191 (63%)

Query:    76 EETTLIGLTFGGYLRSKIKCLKCLGKSELYERMMDLTVEIDGDIGTLEEALAQFTASEIL 135
             + TTL+   FGGYLRS++KC  C   S+ Y+  +D+ +EI      +  AL  F  +++L
Sbjct:    26 QATTLVHQIFGGYLRSRVKCSVCKSVSDTYDPYLDVALEIR-QAANIVRALELFVKADVL 84

Query:   136 VGENKYYCSRCKSYEKAKKKLTVLEEPNILTIVLKRFESGNFGKLNKSVWFPEVLNMAPY 195
              GEN Y C++CK    A K+ T+    N+LT+ LKRF + + GK+ K V +PE LN+ PY
Sbjct:    85 SGENAYMCAKCKKKVPASKRFTIHRTSNVLTLSLKRFANFSGGKITKDVGYPEFLNIRPY 144

Query:   196 MSRTGDGSP-MYSLYAVVVHLDVTNATFSGHYVCYVKNSHEEWFRIDDSTVIPVKLERVL 254
             MS+  +G P MY LYAV+VH   +    +GHY CYVK S+ +W++++DS V    ++ VL
Sbjct:   145 MSQN-NGDPVMYGLYAVLVHSGYS--CHAGHYYCYVKASNGQWYQMNDSLVHSSNVKVVL 201

Query:   255 SEEAYMLLYAR 265
             +++AY+L Y R
Sbjct:   202 NQQAYVLFYLR 212


>UNIPROTKB|F1PQJ0 [details] [associations]
            symbol:LOC100686685 "Uncharacterized protein" species:9615
            "Canis lupus familiaris" [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS50235
            GO:GO:0006511 GO:GO:0004221 OMA:KISACVV
            GeneTree:ENSGT00670000097591 Ensembl:ENSCAFT00000039055
            Uniprot:F1PQJ0
        Length = 530

 Score = 386 (140.9 bits), Expect = 9.2e-36, P = 9.2e-36
 Identities = 87/241 (36%), Positives = 134/241 (55%)

Query:    45 REEDAHEFLRCAVDTMQSVCLKEFG-AKGKIAEETTLIGLTFGGYLRSKIKCLKCLGKSE 103
             ++EDAHE+L   +D MQ  CL E   +  + A+++TLI   FGGY RS+I+CL C G S 
Sbjct:   157 KQEDAHEYLMFILDAMQQACLPEDKPSDSQHAQDSTLIQHIFGGYWRSQIQCLHCQGISS 216

Query:   104 LYERMMDLTVEIDGDIGTLEEALAQFTASEILVGENKYYCSRCKSYEKAKKKLTVLEEPN 163
               E  +D++++I G   ++ +AL Q    E+L GEN Y+CS+C     A K LT      
Sbjct:   217 TLEPYLDISLDI-GAAQSVSQALEQLVKPEMLEGENAYHCSKCLEKVPASKVLTWHSCAK 275

Query:   164 ILTIVLKRFESGNFGKLNKSVWFPEVLNMAPYMSRTGDGSPMYSLYAVVVHLDVTNATFS 223
             +L +VLKRF      K+ K + +PE L+M   +S    G  +Y LYAV+VH   +    S
Sbjct:   276 VLILVLKRFSDFTGNKMTKEMQYPECLDMQHSLSERRAGPLVYVLYAVLVHAGWS--CHS 333

Query:   224 GHYVCYVKNSHEEWFRIDDSTVIPVKLERVLSEEAYMLLYARHSPRPPALIRNNVSHGVK 283
             G Y C+VK  + +W ++DD+ +    +   L + AY+L Y + +     L+  +V  G+ 
Sbjct:   334 GRYFCFVKAGNGQWHKMDDAKISACVVTCALRQLAYVLFYMQKTDMERDLVSGSVEGGIA 393

Query:   284 S 284
             S
Sbjct:   394 S 394


>UNIPROTKB|E2R279 [details] [associations]
            symbol:E2R279 "Ubiquitin carboxyl-terminal hydrolase"
            species:9615 "Canis lupus familiaris" [GO:0008234 "cysteine-type
            peptidase activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent
            protein catabolic process" evidence=IEA] [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 Pfam:PF04774 GO:GO:0008234 GO:GO:0006511
            GO:GO:0004221 InterPro:IPR006861 OMA:VICALRQ
            GeneTree:ENSGT00670000097591 EMBL:AAEX03010545
            Ensembl:ENSCAFT00000023252 Uniprot:E2R279
        Length = 526

 Score = 383 (139.9 bits), Expect = 1.9e-35, P = 1.9e-35
 Identities = 95/290 (32%), Positives = 151/290 (52%)

Query:    45 REEDAHEFLRCAVDTMQSVCLKEFGAKG-KIAEETTLIGLTFGGYLRSKIKCLKCLGKSE 103
             ++EDAHE+L   +D MQ  CL E      +  +++TLI   FGGY RS+I+CL C G S 
Sbjct:   157 KQEDAHEYLMFILDAMQQACLPEDKLSDPESPQDSTLIQQLFGGYWRSQIQCLHCQGISS 216

Query:   104 LYERMMDLTVEIDGDIGTLEEALAQFTASEILVGENKYYCSRCKSYEKAKKKLTVLEEPN 163
               E  +D++++I     ++ +AL Q    E+L GEN Y+CS+C   EK     T    P 
Sbjct:   217 TLESYLDISLDIAA-AHSVSQALEQLVKPELLEGENAYHCSKC--LEKVPASKT---SPK 270

Query:   164 ILTIVLKRFESGNFGKLNKSVWFPEVLNMAPYMSRTGDGSPMYSLYAVVVHLDVTNATFS 223
             +L +VL+RF      K+ K V +PE L+M   +S    G  +Y LYAV+VH     +  S
Sbjct:   271 VLILVLRRFSDLTGNKMTKEVQYPERLDMQHCLSEQRAGPLVYVLYAVLVHAG--RSCHS 328

Query:   224 GHYVCYVKNSHEEWFRIDDSTVIPVKLERVLSEEAYMLLYARHSPRPPALIRNNVSHG-V 282
             GHY C+VK  + +W+++DD+ V    +   L + AY+L Y + +     L R +V  G +
Sbjct:   329 GHYFCFVKAGNGQWYKMDDAKVSACDVICALRQPAYVLFYMQKTDLERDLGRESVEEGGL 388

Query:   283 KSKKKNLEAV-DLNNTSKIRSNSYIPSLDSKAQQKPCTDSNQLFDRDEWK 331
              S + +   V + +       +   P L+ + ++     S Q    D+W+
Sbjct:   389 ASPEADPTVVGEASGEPATDPSVNHPELEERGEET----SRQQMTLDQWR 434


>UNIPROTKB|I3LKE8 [details] [associations]
            symbol:LOC100626328 "Ubiquitin carboxyl-terminal hydrolase"
            species:9823 "Sus scrofa" [GO:0008234 "cysteine-type peptidase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 GO:GO:0008234 GO:GO:0006511 GO:GO:0004221 KO:K11845
            OMA:DGENAYH GeneTree:ENSGT00670000097591 EMBL:FP476116
            RefSeq:XP_003359505.1 Ensembl:ENSSSCT00000024208 GeneID:100626328
            KEGG:ssc:100626328 Uniprot:I3LKE8
        Length = 517

 Score = 380 (138.8 bits), Expect = 4.0e-35, P = 4.0e-35
 Identities = 87/219 (39%), Positives = 125/219 (57%)

Query:    45 REEDAHEFLRCAVDTMQSVCLKEFGAKGKIAEETTLIGLTFGGYLRSKIKCLKCLGKSEL 104
             R+EDAHEFL  A+D MQ  C            E TLI   FGG  RS+I+CL+CLG S+ 
Sbjct:   157 RQEDAHEFLMFALDAMQR-C----------PSEDTLIQQIFGGCWRSQIQCLRCLGVSDT 205

Query:   105 YERMMDLTVEIDGDIGTLEEALAQFTASEILVGENKYYCSRCKSYEKAKKKLTVLEEPNI 164
             ++  +D+T++I     ++E+AL +   +E L GEN Y+C  C     A K+LT+     +
Sbjct:   206 FDPYLDVTLDITA-AQSVEQALRELVKAEKLDGENAYHCGVCLRKGPATKRLTLHRASKV 264

Query:   165 LTIVLKRFESGNFGKLNKSVWFPEVLNMAPYMSRTGDGSPMYSLYAVVVHLDVTNATFSG 224
             L +VLKRF      K++K V +PE L++ PY+S    G+  Y L+AV+VH   T     G
Sbjct:   265 LILVLKRFTDVTGDKMDKKVRYPEHLDLQPYLSVQKAGALDYELFAVLVHSGWT--CHQG 322

Query:   225 HYVCYVKNSHEEWFRIDDSTVIPVKLERVLSEEAYMLLY 263
             HY CY++  +  W+R+DDS V        LS+ AY+L Y
Sbjct:   323 HYFCYIRAGNGWWYRMDDSKVTACDTASALSQSAYVLFY 361


>UNIPROTKB|J9JHA0 [details] [associations]
            symbol:J9JHA0 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS50235
            GO:GO:0006511 GO:GO:0004221 OMA:QNLKTTK
            GeneTree:ENSGT00670000097591 EMBL:AAEX03012849
            Ensembl:ENSCAFT00000046526 Uniprot:J9JHA0
        Length = 376

 Score = 371 (135.7 bits), Expect = 3.6e-34, P = 3.6e-34
 Identities = 86/241 (35%), Positives = 133/241 (55%)

Query:    45 REEDAHEFLRCAVDTMQSVCLKEFG-AKGKIAEETTLIGLTFGGYLRSKIKCLKCLGKSE 103
             ++EDAHE+L   +D MQ  CL E   +  + A+++TLI   FGGY RS+I+CL C   S 
Sbjct:    90 KQEDAHEYLMFILDAMQQACLPEDKPSDSQHAQDSTLIQHIFGGYWRSQIQCLHCQSISS 149

Query:   104 LYERMMDLTVEIDGDIGTLEEALAQFTASEILVGENKYYCSRCKSYEKAKKKLTVLEEPN 163
               E  +D+++    DIG  + ++ Q    E+L GEN Y+CS+      A K LT+     
Sbjct:   150 TLEPYLDISL----DIGAAQ-SVRQLVKPEMLEGENAYHCSKGLEKVPASKVLTLDSCAK 204

Query:   164 ILTIVLKRFESGNFGKLNKSVWFPEVLNMAPYMSRTGDGSPMYSLYAVVVHLDVTNATFS 223
             +L +VLKRF      K+ K V +P+ L+M  Y+S    G  +Y LYAV+VH   +    S
Sbjct:   205 VLILVLKRFSDFTDNKMTKEVQYPKCLDMQHYLSEQRAGPLVYVLYAVLVHAGWS--CHS 262

Query:   224 GHYVCYVKNSHEEWFRIDDSTVIPVKLERVLSEEAYMLLYARHSPRPPALIRNNVSHGVK 283
             G Y C+VK  + +W+++DD+ V    +   L + AY+L Y + +     L+  +V  G+ 
Sbjct:   263 GRYFCFVKAGNGQWYKMDDAKVSACVVTCALRQPAYVLFYMQKTDMERDLVSGSVEGGIA 322

Query:   284 S 284
             S
Sbjct:   323 S 323


>TAIR|locus:2178535 [details] [associations]
            symbol:UBP21 "ubiquitin-specific protease 21"
            species:3702 "Arabidopsis thaliana" [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] [GO:0004843
            "ubiquitin-specific protease activity" evidence=ISS] [GO:0005634
            "nucleus" evidence=ISM] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0009165 "nucleotide
            biosynthetic process" evidence=RCA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 EMBL:CP002688 GenomeReviews:BA000015_GR
            GO:GO:0008234 GO:GO:0006511 EMBL:AB016882 GO:GO:0004221 HSSP:Q93009
            eggNOG:COG5077 KO:K11855 HOGENOM:HOG000154757 EMBL:AF302669
            IPI:IPI00527791 RefSeq:NP_568667.1 UniGene:At.7737
            ProteinModelPortal:Q9FIQ1 SMR:Q9FIQ1 MEROPS:C19.A15
            EnsemblPlants:AT5G46740.1 GeneID:834717 KEGG:ath:AT5G46740
            GeneFarm:2574 TAIR:At5g46740 InParanoid:Q9FIQ1 OMA:KPFAETS
            PhylomeDB:Q9FIQ1 ProtClustDB:CLSN2689489 Genevestigator:Q9FIQ1
            Uniprot:Q9FIQ1
        Length = 732

 Score = 349 (127.9 bits), Expect = 5.9e-31, P = 5.9e-31
 Identities = 98/282 (34%), Positives = 144/282 (51%)

Query:    46 EEDAHEFLRCAVDTMQSVCLKEFGAKGKIA-EETTLIGLTFGGYLRSKIKCLKCLGKSEL 104
             +EDAHEFL+  +D ++  CL      G ++ ++  ++   FGG L S + C  C   S  
Sbjct:   249 QEDAHEFLQSFLDKLERCCLDPKNQLGSVSSQDLNIVDNVFGGGLMSTLCCCNCNSVSNT 308

Query:   105 YERMMDLTVEIDGDIGTLEEALAQFTASEILVGENKYYCSRCKSYEKAKKKLTVLEEPNI 164
             +E  +  ++EI+ D+ TL +AL  FT  E L  E++  C  CK     +K+L   + P +
Sbjct:   309 FEPSLGWSLEIE-DVNTLWKALESFTCVEKL--EDQLTCDNCKEKVTKEKQLRFDKLPPV 365

Query:   165 LTIVLKRFESGN--FGKLNKSVWFPEVLNMAPYMSRTGDG--SPMYSLYAVVVHLDVTNA 220
              T  LKRF +      K+   + FP  L+++P+MS   D   S  Y LYA V H+ +  A
Sbjct:   366 ATFHLKRFTNDGVTMEKIFDHIEFPLELDLSPFMSSNHDPEVSTRYHLYAFVEHIGI-RA 424

Query:   221 TFSGHYVCYVKNSHEEWFRIDDSTVIPVKLERVLSEEAYMLLYARHSPRPPALIRNNVSH 280
             TF GHY  YV+++ E W   DDS V  +  ERVLS  AY+L YAR     P       S 
Sbjct:   425 TF-GHYSSYVRSAPETWHNFDDSKVTRISEERVLSRPAYILFYAREGT--PWF-----SS 476

Query:   281 GVKSKKKNLEAVDLN-NTSKIRSNSYIPSLDSKAQQKPCTDS 321
               +  K   EA  L+ +   +  NSY  S+D+ +  K C DS
Sbjct:   477 TFEQLKTVFEATPLHFSPVSVLDNSY-ESVDNSS--KACNDS 515


>UNIPROTKB|B4LG38 [details] [associations]
            symbol:Usp36 "Ubiquitin carboxyl-terminal hydrolase 36"
            species:7244 "Drosophila virilis" [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=ISS] [GO:0005730 "nucleolus"
            evidence=ISS] [GO:0016579 "protein deubiquitination" evidence=ISS]
            [GO:0030718 "germ-line stem cell maintenance" evidence=ISS]
            [GO:0035019 "somatic stem cell maintenance" evidence=ISS]
            InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 GO:GO:0005730 GO:GO:0008234
            GO:GO:0006511 GO:GO:0035019 GO:GO:0030718 GO:GO:0016579
            GO:GO:0004221 EMBL:CH940647 eggNOG:COG5533 KO:K11855
            OrthoDB:EOG4WM38P OMA:PYESASE RefSeq:XP_002047004.1
            EnsemblMetazoa:FBtr0229117 GeneID:6622549 KEGG:dvi:Dvir_GJ13192
            FlyBase:FBgn0200418 InParanoid:B4LG38 Uniprot:B4LG38
        Length = 1214

 Score = 336 (123.3 bits), Expect = 2.4e-30, Sum P(2) = 2.4e-30
 Identities = 97/307 (31%), Positives = 152/307 (49%)

Query:    25 VSPIGILSKIQKIGSHLGHGREEDAHEFLRCAVDTMQSVCL---KEFGAKGKIAEETTLI 81
             V P  I +K+++I  H+  GR+EDAHEFLR  V+ M+   L   + F    ++ +ETT I
Sbjct:   260 VRPFLIYTKLRQICKHMVVGRQEDAHEFLRFLVEAMEKAYLMRFRNFKELDQLVKETTPI 319

Query:    82 GLTFGGYLRSKIKCLKCLGKSELYERMMDLTVEIDGDIGTLEEALAQFTASEILVGENKY 141
                FGGYLRS+++CL C   S  ++   DL ++I     TLEEA   + + E L  +  Y
Sbjct:   320 SQIFGGYLRSEVRCLSCNHVSITFQHFQDLLLDIR-KADTLEEAFDGYFSRERLE-DMGY 377

Query:   142 YCSRCKSYEKAKKKLTVLEEPNILTIVLKRFES-GNFGKLNKSVWFPEVLNMAPYMSR-- 198
              C  CK    A K+ ++   P  L I LKRF   GN  KL K + F   ++++ + +R  
Sbjct:   378 KCEGCKKKVSATKQFSLERAPITLCIQLKRFSMMGN--KLTKQISFKPRIDLSRFAARSP 435

Query:   199 TGDGSPM-YSLYAVVVHLDVTNATFSGHYVCYVKNSHEEWFRIDDSTVIPVKLERVLSEE 257
             T    P+ Y L ++V HL V+     GHY          ++  DDS V P+ ++ V +  
Sbjct:   436 TAAAQPLSYRLVSMVTHLGVSQ--HCGHYTAIGLTEAGSYYNFDDSYVKPIAMQSVCNTN 493

Query:   258 AYMLLYARH--SPRPPALIRNNVSHGVKSKKKNLEAVDLNNTSKIRSNSYIPSLDSKAQQ 315
             AY++ Y     +    + I NN S    S   N  A  LN   ++ + ++ P+  + A  
Sbjct:   494 AYIMFYELDVANSSSSSTINNNSS----SSSNNSVAPKLNGL-RLSNGAHSPAAATVAVA 548

Query:   316 KPCTDSN 322
                T ++
Sbjct:   549 ATATSTS 555

 Score = 40 (19.1 bits), Expect = 2.4e-30, Sum P(2) = 2.4e-30
 Identities = 17/49 (34%), Positives = 21/49 (42%)

Query:   379 GDTP--SWYRSYGITSDSIASSSYQNSNVGSEGENDAWQHGWREGLGRD 425
             GDT   S   S    S +I S+S  NSN   + +N       RE   RD
Sbjct:  1049 GDTDVHSDVNSSSNNSSNINSNSNSNSNGNGKRKNSTLLAEAREQRKRD 1097


>UNIPROTKB|B3NC86 [details] [associations]
            symbol:Usp36 "Ubiquitin carboxyl-terminal hydrolase 36"
            species:7220 "Drosophila erecta" [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=ISS] [GO:0005730 "nucleolus"
            evidence=ISS] [GO:0016579 "protein deubiquitination" evidence=ISS]
            [GO:0030718 "germ-line stem cell maintenance" evidence=ISS]
            [GO:0035019 "somatic stem cell maintenance" evidence=ISS]
            InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 GO:GO:0005730 GO:GO:0008234
            GO:GO:0006511 GO:GO:0035019 GO:GO:0030718 GO:GO:0016579
            GO:GO:0004221 EMBL:CH954178 KO:K11855 OrthoDB:EOG4WM38P
            RefSeq:XP_001972018.1 EnsemblMetazoa:FBtr0135339 GeneID:6544695
            KEGG:der:Dere_GG15285 FlyBase:FBgn0107537 Uniprot:B3NC86
        Length = 1085

 Score = 334 (122.6 bits), Expect = 6.5e-30, Sum P(2) = 6.5e-30
 Identities = 87/256 (33%), Positives = 132/256 (51%)

Query:    15 ILNAKDGSYPVSPIGILSKIQKIGSHLGHGREEDAHEFLRCAVDTMQSVCLKEF-GAK-- 71
             +L  +     V P  I SK+++I  H+  GR+EDAHEFLR  V+ M+   L  F   K  
Sbjct:   229 LLATQSNQSAVRPFLIYSKLKQICKHMVVGRQEDAHEFLRFLVEAMERAYLMRFRNYKEL 288

Query:    72 GKIAEETTLIGLTFGGYLRSKIKCLKCLGKSELYERMMDLTVEIDGDIGTLEEALAQFTA 131
              ++ +ETT +G  FGGYLRS+++CL C   S  ++   DL ++I     TLE+A     +
Sbjct:   289 DQLVKETTPLGQIFGGYLRSEVRCLSCNHVSITFQHFQDLLLDIR-KADTLEDAFEGHFS 347

Query:   132 SEILVGENKYYCSRCKSYEKAKKKLTVLEEPNILTIVLKRFES-GNFGKLNKSVWFPEVL 190
              E L  +  Y C  CK    A K+ ++   P  L I LKRF   GN  KL K + F   +
Sbjct:   348 RERLE-DMGYKCEGCKKKVSATKQFSLERAPITLCIQLKRFSMIGN--KLTKQISFKPRI 404

Query:   191 NMAPYMSRT--GDGSPM-YSLYAVVVHLDVTNATFSGHYVCYVKNSHEEWFRIDDSTVIP 247
             +++ Y +R+      P+ Y L ++V HL V+     GHY          ++  DDS V P
Sbjct:   405 DLSKYAARSPAAQAQPLTYRLVSMVTHLGVSQ--HCGHYTAIGSTDTGSYYNFDDSYVRP 462

Query:   248 VKLERVLSEEAYMLLY 263
             + ++ V +  AY++ Y
Sbjct:   463 IAMQSVCNTNAYIMFY 478

 Score = 42 (19.8 bits), Expect = 6.5e-30, Sum P(2) = 6.5e-30
 Identities = 11/36 (30%), Positives = 19/36 (52%)

Query:   435 STKQYRNLGHQYVSNGSSRDIDSDRVGWANPSDVRL 470
             S+  ++++  Q     SS D DS+    + PS V+L
Sbjct:   601 SSSNHKSINQQQYLPISSEDEDSEDERTSRPSTVQL 636


>UNIPROTKB|B4MLR8 [details] [associations]
            symbol:Usp36 "Ubiquitin carboxyl-terminal hydrolase 36"
            species:7260 "Drosophila willistoni" [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=ISS] [GO:0005730 "nucleolus"
            evidence=ISS] [GO:0016579 "protein deubiquitination" evidence=ISS]
            [GO:0030718 "germ-line stem cell maintenance" evidence=ISS]
            [GO:0035019 "somatic stem cell maintenance" evidence=ISS]
            InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 GO:GO:0005730 GO:GO:0008234
            GO:GO:0006511 GO:GO:0035019 GO:GO:0030718 GO:GO:0016579
            GO:GO:0004221 eggNOG:COG5533 EMBL:CH963847 KO:K11855 OMA:PYESASE
            OrthoDB:EOG4VMCZ7 RefSeq:XP_002062008.1 EnsemblMetazoa:FBtr0247950
            GeneID:6638806 KEGG:dwi:Dwil_GK17299 FlyBase:FBgn0219298
            InParanoid:B4MLR8 Uniprot:B4MLR8
        Length = 1311

 Score = 329 (120.9 bits), Expect = 3.4e-29, Sum P(2) = 3.4e-29
 Identities = 86/263 (32%), Positives = 136/263 (51%)

Query:    25 VSPIGILSKIQKIGSHLGHGREEDAHEFLRCAVDTMQSVCL---KEFGAKGKIAEETTLI 81
             + P  I SK+++I  H+  GR+EDAHEFLR  V+ M+   L   + +    ++ +ETT +
Sbjct:   290 IRPYHIYSKLKQICKHMVIGRQEDAHEFLRFLVEAMEKAYLMRYRNYKELDQLVKETTPL 349

Query:    82 GLTFGGYLRSKIKCLKCLGKSELYERMMDLTVEIDGDIGTLEEALAQFTASEILVGENKY 141
                FGGYLRS+++CL C   S  ++   DL ++I     TL+EA   + + E L  +  Y
Sbjct:   350 NQIFGGYLRSEVRCLSCNHVSITFQHFQDLLLDIRKS-DTLDEAFDGYFSRERLE-DMGY 407

Query:   142 YCSRCKSYEKAKKKLTVLEEPNILTIVLKRFES-GNFGKLNKSVWFPEVLNMAPYMSR-- 198
              C  CK    A K+ ++   P  L I LKRF   GN  KL K + F   ++++ + +R  
Sbjct:   408 KCEGCKKKVSATKQFSLQRAPITLCIQLKRFSMIGN--KLTKQISFKPRIDLSRFAARSP 465

Query:   199 TGDGS-PM-YSLYAVVVHLDVTNATFSGHYVCYVKNSHEEWFRIDDSTVIPVKLERVLSE 256
             T  G  P+ Y L ++V HL V+     GHY          ++  DDS V P+ ++ V S 
Sbjct:   466 TAQGQLPLTYRLVSLVTHLGVSQ--HCGHYTAIGLTESGSYYNFDDSYVRPIAMQSVCST 523

Query:   257 EAYMLLYARHSPRPPALIRNNVS 279
              +Y++ Y     +P A   N ++
Sbjct:   524 NSYIMFYELDLNQPLATPANKLN 546

 Score = 55 (24.4 bits), Expect = 3.4e-29, Sum P(2) = 3.4e-29
 Identities = 17/67 (25%), Positives = 29/67 (43%)

Query:   267 SPRPPALIRNNVSHGVKSKKKNLEAVDLNNTSKI--RSNSYIP-------SLDSKAQQKP 317
             +P     I  N ++G  S   N  A   NN++K+  +   Y+P         D +  ++P
Sbjct:   678 NPNTNTTINTNTNNG-NSNNNNTNATTANNSNKLNQQQQQYLPMSSSDEEDSDEEKMKRP 736

Query:   318 CTDSNQL 324
              T + QL
Sbjct:   737 TTTTPQL 743

 Score = 40 (19.1 bits), Expect = 1.3e-27, Sum P(2) = 1.3e-27
 Identities = 14/43 (32%), Positives = 23/43 (53%)

Query:   267 SPRPPALIRNNVSHGVKSKKKNLEAVD-----LNNTSKIRSNS 304
             SP+P ++      +   SK+K  +A+D     LNN +K R N+
Sbjct:   861 SPKPASMPPATNFNSSSSKQKT-DAIDEIFKSLNNFNKKRINN 902

 Score = 37 (18.1 bits), Expect = 2.6e-27, Sum P(2) = 2.6e-27
 Identities = 15/76 (19%), Positives = 27/76 (35%)

Query:   394 SIASSSYQNSNVGSEGE---NDAWQHGWREGLGRDGNPAILFTESTKQYRNLGHQYVSNG 450
             ++A ++  N+N  S      N         G   + N       ++ +      QY+   
Sbjct:   662 AVAPNANANANGKSSSNPNTNTTINTNTNNGNSNNNNTNATTANNSNKLNQQQQQYLPMS 721

Query:   451 SSRDIDSDRVGWANPS 466
             SS + DSD      P+
Sbjct:   722 SSDEEDSDEEKMKRPT 737


>UNIPROTKB|Q2LZB1 [details] [associations]
            symbol:Usp36 "Ubiquitin carboxyl-terminal hydrolase 36"
            species:46245 "Drosophila pseudoobscura pseudoobscura" [GO:0004221
            "ubiquitin thiolesterase activity" evidence=ISS] [GO:0005730
            "nucleolus" evidence=ISS] [GO:0016579 "protein deubiquitination"
            evidence=ISS] [GO:0030718 "germ-line stem cell maintenance"
            evidence=ISS] [GO:0035019 "somatic stem cell maintenance"
            evidence=ISS] InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443
            PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 GO:GO:0005730
            GO:GO:0008234 GO:GO:0006511 GO:GO:0035019 GO:GO:0030718
            GO:GO:0016579 GO:GO:0004221 EMBL:CH379069 eggNOG:COG5533
            HSSP:P40818 KO:K11855 OrthoDB:EOG4WM38P RefSeq:XP_001353862.2
            GeneID:4813226 KEGG:dpo:Dpse_GA18934 FlyBase:FBgn0078933
            InParanoid:Q2LZB1 Uniprot:Q2LZB1
        Length = 1059

 Score = 329 (120.9 bits), Expect = 8.2e-28, Sum P(2) = 8.2e-28
 Identities = 83/244 (34%), Positives = 129/244 (52%)

Query:    27 PIGILSKIQKIGSHLGHGREEDAHEFLRCAVDTMQSVCL---KEFGAKGKIAEETTLIGL 83
             P  I SK+++I  H+  GR+EDAHEFLR  V+ M+   L   + F    ++ +ETT +  
Sbjct:   239 PFHIYSKLKQICKHMVVGRQEDAHEFLRFLVEAMEKAYLMRFRNFKELDQLVKETTPLNQ 298

Query:    84 TFGGYLRSKIKCLKCLGKSELYERMMDLTVEIDGDIGTLEEALAQFTASEILVGENKYYC 143
              FGGYLRS+++CL C   S  ++   DL ++I     TLEEA   + + E L  +  Y C
Sbjct:   299 IFGGYLRSEVRCLSCSHVSITFQHFQDLLLDIRKS-DTLEEAFDGYFSRERLE-DMGYKC 356

Query:   144 SRCKSYEKAKKKLTVLEEPNILTIVLKRFES-GNFGKLNKSVWFPEVLNMAPYMSRT--G 200
               CK    A K+ ++   P  L I LKRF   GN  KL K++ F   ++++ + +R+   
Sbjct:   357 EGCKKKVSATKQFSLERAPITLCIQLKRFSMIGN--KLTKTISFKPRIDLSRFAARSPAA 414

Query:   201 DGSPM-YSLYAVVVHLDVTNATFSGHYVCYVKNSHEEWFRIDDSTVIPVKLERVLSEEAY 259
                P+ Y L ++V HL V+     GHY          ++  DDS V P+ ++ V +  AY
Sbjct:   415 AAQPLTYRLVSMVTHLGVSQ--HCGHYTAIGMTESGSYYNFDDSYVRPIAMQSVCNTNAY 472

Query:   260 MLLY 263
             ++ Y
Sbjct:   473 IMFY 476

 Score = 39 (18.8 bits), Expect = 8.2e-28, Sum P(2) = 8.2e-28
 Identities = 10/33 (30%), Positives = 17/33 (51%)

Query:   387 SYGITSDSIASSSYQNSNVGSEGENDAWQHGWR 419
             S  + S S AS++  + +   E EN    +GW+
Sbjct:   754 SSSLASAS-ASAASDDEDADEEEENSKLTNGWQ 785


>UNIPROTKB|B4QIS3 [details] [associations]
            symbol:Usp36 "Ubiquitin carboxyl-terminal hydrolase 36"
            species:7240 "Drosophila simulans" [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=ISS] [GO:0005730 "nucleolus"
            evidence=ISS] [GO:0016579 "protein deubiquitination" evidence=ISS]
            [GO:0030718 "germ-line stem cell maintenance" evidence=ISS]
            [GO:0035019 "somatic stem cell maintenance" evidence=ISS]
            InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 GO:GO:0005730 GO:GO:0008234
            GO:GO:0006511 GO:GO:0035019 GO:GO:0030718 GO:GO:0016579
            GO:GO:0004221 EMBL:CM000363 KO:K11855 OrthoDB:EOG4WM38P
            RefSeq:XP_002083763.1 EnsemblMetazoa:FBtr0213809 GeneID:6736916
            KEGG:dsi:Dsim_GD13899 FlyBase:FBgn0185595 Uniprot:B4QIS3
        Length = 988

 Score = 328 (120.5 bits), Expect = 2.1e-27, P = 2.1e-27
 Identities = 91/287 (31%), Positives = 141/287 (49%)

Query:     2 PGLHSTFDVVSCLILNAKDGSYPVSPIGILSKIQKIGSHLGHGREEDAHEFLRCAVDTMQ 61
             PG       ++  +L  +     V P  I SK+++I  H+  GR+EDAHEFLR  V+ M+
Sbjct:   121 PGSGCIICAMAKTLLATQSNQSAVRPFLIYSKLKQICKHMVVGRQEDAHEFLRFLVEAME 180

Query:    62 SVCLKEF-GAK--GKIAEETTLIGLTFGGYLRSKIKCLKCLGKSELYERMMDLTVEIDGD 118
                L  F   K   ++ +ETT +G  FGGYLRS+++CL C   S  ++   DL ++I   
Sbjct:   181 RAYLMRFRNYKELDQLVKETTPLGQIFGGYLRSEVRCLSCNHVSITFQHFQDLLLDIR-K 239

Query:   119 IGTLEEALAQFTASEILVGENKYYCSRCKSYEKAKKKLTVLEEPNILTIVLKRFES-GNF 177
               +LE+A     + E L  +  Y C  CK    A K+ ++   P  L I LKRF   GN 
Sbjct:   240 ADSLEDAFEGHFSRERLE-DMGYKCEGCKKKVSATKQFSLERAPITLCIQLKRFSMIGN- 297

Query:   178 GKLNKSVWFPEVLNMAPYMSRT--GDGSPM-YSLYAVVVHLDVTNATFSGHYVCYVKNSH 234
              KL K + F   ++++ Y +R+      P+ Y L ++V HL  +     GHY        
Sbjct:   298 -KLTKQISFKPRIDLSKYAARSPAAQAQPLTYRLVSMVTHLGASQ--HCGHYTAIGSTDT 354

Query:   235 EEWFRIDDSTVIPVKLERVLSEEAYMLLYA---RHSPRPPALIRNNV 278
               ++  DDS V P+ ++ V +  AY++ +      +  PPA   N V
Sbjct:   355 GSFYNFDDSYVRPITMQNVCNTNAYIMFFELDLSQAASPPANRPNGV 401


>UNIPROTKB|B4KXJ5 [details] [associations]
            symbol:Usp36 "Ubiquitin carboxyl-terminal hydrolase 36"
            species:7230 "Drosophila mojavensis" [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=ISS] [GO:0005730 "nucleolus"
            evidence=ISS] [GO:0016579 "protein deubiquitination" evidence=ISS]
            [GO:0030718 "germ-line stem cell maintenance" evidence=ISS]
            [GO:0035019 "somatic stem cell maintenance" evidence=ISS]
            InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 GO:GO:0005730 GO:GO:0008234
            GO:GO:0006511 GO:GO:0035019 GO:GO:0030718 GO:GO:0016579
            GO:GO:0004221 EMBL:CH933809 KO:K11855 RefSeq:XP_002008205.1
            EnsemblMetazoa:FBtr0164086 GeneID:6582504 KEGG:dmo:Dmoj_GI13361
            FlyBase:FBgn0136118 InParanoid:B4KXJ5 OrthoDB:EOG4VMCZ7
            Uniprot:B4KXJ5
        Length = 1185

 Score = 324 (119.1 bits), Expect = 6.8e-27, Sum P(2) = 6.8e-27
 Identities = 85/246 (34%), Positives = 130/246 (52%)

Query:    25 VSPIGILSKIQKIGSHLGHGREEDAHEFLRCAVDTMQSVCLKEF-GAK--GKIAEETTLI 81
             V P  I +K+++I  H+  GR+EDAHEFLR  V+ M+   L  F   K   ++ +ETT +
Sbjct:   267 VRPFLIYTKLRQICKHMVVGRQEDAHEFLRFLVEAMEKAYLMRFRNYKELDQLVKETTPL 326

Query:    82 GLTFGGYLRSKIKCLKCLGKSELYERMMDLTVEIDGDIGTLEEALAQFTASEILVGENKY 141
                FGGYLRS+++CL C   S  ++   DL ++I     TLEEA   + + E L  +  Y
Sbjct:   327 SQIFGGYLRSEVRCLSCNHVSITFQHFQDLLLDIR-KADTLEEAFDGYFSRERLE-DMGY 384

Query:   142 YCSRCKSYEKAKKKLTVLEEPNILTIVLKRFES-GNFGKLNKSVWFPEVLNMAPYMSRTG 200
              C  CK    A K+ ++   P  L I LKRF   GN  KL K + F   ++++ + +R+ 
Sbjct:   385 KCEGCKKKVSATKQFSLERAPITLCIQLKRFSMMGN--KLTKQISFKPRIDLSRFAARSP 442

Query:   201 DGS--PM-YSLYAVVVHLDVTNATFSGHYVCYVKNSHEEWFRIDDSTVIPVKLERVLSEE 257
               S  P+ Y L ++V HL V+     GHY          ++  DDS V P+ ++ V +  
Sbjct:   443 AASTQPLSYRLVSMVTHLGVSQ--HCGHYTAIGLTESGSYYNFDDSYVRPIAMQSVCNTN 500

Query:   258 AYMLLY 263
             AY++ Y
Sbjct:   501 AYIMFY 506

 Score = 41 (19.5 bits), Expect = 6.8e-27, Sum P(2) = 6.8e-27
 Identities = 9/17 (52%), Positives = 12/17 (70%)

Query:   293 DLNNTSKIRSNSYIPSL 309
             ++NN+  I SNS I SL
Sbjct:  1038 NINNSKNIDSNSNIKSL 1054

 Score = 37 (18.1 bits), Expect = 6.8e-27, Sum P(3) = 6.8e-27
 Identities = 7/26 (26%), Positives = 16/26 (61%)

Query:   315 QKPCTDSNQLFDRDEWKFRSMQRSPA 340
             +KP   S+ L  ++ W+ ++  ++PA
Sbjct:   842 KKPSNSSSSLISKNGWQSQN-GKAPA 866

 Score = 37 (18.1 bits), Expect = 6.8e-27, Sum P(3) = 6.8e-27
 Identities = 11/32 (34%), Positives = 17/32 (53%)

Query:   445 QYVSNGSSRDIDSDRVGWANPSDVRLRRANGD 476
             Q + NGS++   + RVG    S+     ANG+
Sbjct:   953 QKLLNGSAKSAQTPRVGNGYQSEAT---ANGN 981


>UNIPROTKB|B3M3M6 [details] [associations]
            symbol:Usp36 "Ubiquitin carboxyl-terminal hydrolase 36"
            species:7217 "Drosophila ananassae" [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=ISS] [GO:0005730 "nucleolus"
            evidence=ISS] [GO:0016579 "protein deubiquitination" evidence=ISS]
            [GO:0030718 "germ-line stem cell maintenance" evidence=ISS]
            [GO:0035019 "somatic stem cell maintenance" evidence=ISS]
            InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 GO:GO:0005730 GO:GO:0008234
            GO:GO:0006511 GO:GO:0035019 GO:GO:0030718 GO:GO:0016579
            GO:GO:0004221 eggNOG:COG5533 EMBL:CH902618 KO:K11855
            RefSeq:XP_001957513.1 EnsemblMetazoa:FBtr0128692 GeneID:6506628
            KEGG:dan:Dana_GF23992 FlyBase:FBgn0100986 InParanoid:B3M3M6
            OrthoDB:EOG4WM38P Uniprot:B3M3M6
        Length = 1091

 Score = 325 (119.5 bits), Expect = 7.3e-27, P = 7.3e-27
 Identities = 85/246 (34%), Positives = 130/246 (52%)

Query:    25 VSPIGILSKIQKIGSHLGHGREEDAHEFLRCAVDTMQSVCLKEF-GAK--GKIAEETTLI 81
             V P  I +K+++I  H+  GR+EDAHEFLR  V+ M+   L  F   K   ++ +ETT +
Sbjct:   242 VRPFLIYTKLKQICKHMIVGRQEDAHEFLRFLVEAMERAYLMRFRNYKELDQLVKETTPL 301

Query:    82 GLTFGGYLRSKIKCLKCLGKSELYERMMDLTVEIDGDIGTLEEALAQFTASEILVGENKY 141
             G  FGGYLRS+++CL C   S  ++   DL ++I     +LEEA   + + E L  +  Y
Sbjct:   302 GQIFGGYLRSEVRCLSCNHVSITFQHFQDLLLDIRKS-DSLEEAFEGYFSREKLE-DFGY 359

Query:   142 YCSRCKSYEKAKKKLTVLEEPNILTIVLKRFES-GNFGKLNKSVWFPEVLNMAPYMSRTG 200
              C  CK    A K+  +   P  L I LKRF   GN  KL K + F   ++++ + +R+ 
Sbjct:   360 KCEGCKKKVSATKQFRLERAPITLCIQLKRFSMMGN--KLTKQITFKPRIDLSKFAARSP 417

Query:   201 DGS--PM-YSLYAVVVHLDVTNATFSGHYVCYVKNSHEEWFRIDDSTVIPVKLERVLSEE 257
               S  P+ Y L ++V HL V+     GHY          ++  DDS V P+ ++ V +  
Sbjct:   418 AASVQPLIYRLVSMVTHLGVSQ--HCGHYTAIGSTEAGSYYNFDDSYVRPIAIQSVCNTN 475

Query:   258 AYMLLY 263
             AY++ Y
Sbjct:   476 AYIMFY 481


>UNIPROTKB|B4IXE0 [details] [associations]
            symbol:Usp36 "Ubiquitin carboxyl-terminal hydrolase 36"
            species:7222 "Drosophila grimshawi" [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=ISS] [GO:0005730 "nucleolus"
            evidence=ISS] [GO:0016579 "protein deubiquitination" evidence=ISS]
            [GO:0030718 "germ-line stem cell maintenance" evidence=ISS]
            [GO:0035019 "somatic stem cell maintenance" evidence=ISS]
            InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 GO:GO:0005730 GO:GO:0008234
            GO:GO:0006511 GO:GO:0035019 GO:GO:0030718 GO:GO:0016579
            GO:GO:0004221 eggNOG:COG5533 EMBL:CH916366 KO:K11855
            OrthoDB:EOG4WM38P RefSeq:XP_001984029.1 EnsemblMetazoa:FBtr0151629
            GeneID:6558136 KEGG:dgr:Dgri_GH16215 FlyBase:FBgn0123686
            InParanoid:B4IXE0 OMA:PYESASE Uniprot:B4IXE0
        Length = 1240

 Score = 325 (119.5 bits), Expect = 8.7e-27, Sum P(2) = 8.7e-27
 Identities = 84/246 (34%), Positives = 129/246 (52%)

Query:    25 VSPIGILSKIQKIGSHLGHGREEDAHEFLRCAVDTMQSVCLKEF-GAK--GKIAEETTLI 81
             V P  I SK+++I  H+  GR+EDAHEFLR  ++ M+   L  F   K   ++ +ETT +
Sbjct:   270 VRPFLIYSKLRQICKHMVVGRQEDAHEFLRFLIEAMEKAYLMRFRNYKELDQLVKETTPL 329

Query:    82 GLTFGGYLRSKIKCLKCLGKSELYERMMDLTVEIDGDIGTLEEALAQFTASEILVGENKY 141
                FGGYLRS+++CL C   S  ++   DL ++I     TLE+A   + + E L  +  Y
Sbjct:   330 NQIFGGYLRSEVRCLSCNHVSITFQHFQDLLLDIRKS-DTLEDAFDGYFSRERLE-DMGY 387

Query:   142 YCSRCKSYEKAKKKLTVLEEPNILTIVLKRFES-GNFGKLNKSVWFPEVLNMAPYMSR-- 198
              C  CK    A K+ ++   P  L I LKRF   GN  KL K + F   ++++ + +R  
Sbjct:   388 KCEGCKKKVSATKQFSLERAPITLCIQLKRFSMMGN--KLTKQISFKPRIDLSRFAARSP 445

Query:   199 TGDGSPM-YSLYAVVVHLDVTNATFSGHYVCYVKNSHEEWFRIDDSTVIPVKLERVLSEE 257
             T    P+ Y L ++V HL V+     GHY          ++  DDS V P+ ++ V +  
Sbjct:   446 TAAAQPLSYRLVSMVTHLGVSQ--HCGHYTAIGLTETGSYYNFDDSCVRPIAMQSVCNTN 503

Query:   258 AYMLLY 263
             AY++ Y
Sbjct:   504 AYIMFY 509

 Score = 39 (18.8 bits), Expect = 8.7e-27, Sum P(2) = 8.7e-27
 Identities = 9/19 (47%), Positives = 11/19 (57%)

Query:   463 ANPSDVRLRRANGDYRSAQ 481
             ANPS  R +  NG  +S Q
Sbjct:   966 ANPSAKRQKLLNGSSKSQQ 984

 Score = 39 (18.8 bits), Expect = 8.7e-27, Sum P(2) = 8.7e-27
 Identities = 9/43 (20%), Positives = 23/43 (53%)

Query:   375 DLIFGDTPSWYRSYGITSDSIASSSYQNSNVGSEGENDAWQHG 417
             D+  G + ++  +Y   ++ ++SSS  +S+  S   + +  +G
Sbjct:  1057 DVNSGHSSNYGTNYKSLNNDMSSSSSSSSSTNSSSNSSSRSNG 1099


>UNIPROTKB|B4PIW8 [details] [associations]
            symbol:Usp36 "Ubiquitin carboxyl-terminal hydrolase 36"
            species:7245 "Drosophila yakuba" [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=ISS] [GO:0005730 "nucleolus"
            evidence=ISS] [GO:0016579 "protein deubiquitination" evidence=ISS]
            [GO:0030718 "germ-line stem cell maintenance" evidence=ISS]
            [GO:0035019 "somatic stem cell maintenance" evidence=ISS]
            InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 GO:GO:0005730 GO:GO:0008234
            GO:GO:0006511 GO:GO:0035019 GO:GO:0030718 GO:GO:0016579
            GO:GO:0004221 eggNOG:COG5533 EMBL:CM000159 KO:K11855
            OrthoDB:EOG4WM38P RefSeq:XP_002093826.1 EnsemblMetazoa:FBtr0268026
            GeneID:6533100 KEGG:dya:Dyak_GE21508 FlyBase:FBgn0238765
            Uniprot:B4PIW8
        Length = 1082

 Score = 324 (119.1 bits), Expect = 9.9e-27, P = 9.9e-27
 Identities = 85/256 (33%), Positives = 131/256 (51%)

Query:    15 ILNAKDGSYPVSPIGILSKIQKIGSHLGHGREEDAHEFLRCAVDTMQSVCLKEF-GAK-- 71
             +L  +     V P  I SK+++I  H+  GR+EDAHEFLR  V+ M+   L  F   K  
Sbjct:   229 LLATQSNQSAVRPFLIYSKLKQICKHMVVGRQEDAHEFLRFLVEAMERAYLMRFRNYKEL 288

Query:    72 GKIAEETTLIGLTFGGYLRSKIKCLKCLGKSELYERMMDLTVEIDGDIGTLEEALAQFTA 131
              ++ +ETT +G  FGGYLRS+++CL C   S  ++   DL ++I     +LE+A     +
Sbjct:   289 DQLVKETTPLGQIFGGYLRSEVRCLSCNHVSITFQHFQDLLLDIR-KADSLEDAFEGHFS 347

Query:   132 SEILVGENKYYCSRCKSYEKAKKKLTVLEEPNILTIVLKRFES-GNFGKLNKSVWFPEVL 190
              E L  +  Y C  CK    A K+ ++   P  L I LKRF   GN  KL K +     +
Sbjct:   348 RERLE-DMGYKCEGCKKKVSATKQFSLERAPITLCIQLKRFSMIGN--KLTKQISLKPRI 404

Query:   191 NMAPYMSRT--GDGSPM-YSLYAVVVHLDVTNATFSGHYVCYVKNSHEEWFRIDDSTVIP 247
             +++ Y +R+      P+ Y L ++V HL V+     GHY          ++  DDS V P
Sbjct:   405 DLSKYAARSPAAQAQPLTYRLVSMVTHLGVSQ--HCGHYTAIGSTDTGSYYNFDDSYVRP 462

Query:   248 VKLERVLSEEAYMLLY 263
             + ++ V +  AY++ Y
Sbjct:   463 IAMQSVCNTNAYIMFY 478


>FB|FBgn0260936 [details] [associations]
            symbol:scny "scrawny" species:7227 "Drosophila melanogaster"
            [GO:0006511 "ubiquitin-dependent protein catabolic process"
            evidence=IEA] [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=IEA] [GO:0016579 "protein deubiquitination" evidence=NAS]
            [GO:0040007 "growth" evidence=IMP] [GO:0007591 "molting cycle,
            chitin-based cuticle" evidence=IMP] [GO:0016578 "histone
            deubiquitination" evidence=IMP;IDA] [GO:0042981 "regulation of
            apoptotic process" evidence=IMP] [GO:0045824 "negative regulation
            of innate immune response" evidence=IMP] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 EMBL:AE014296 GO:GO:0005730 GO:GO:0042981
            GO:GO:0008234 GO:GO:0006511 GO:GO:0035019 GO:GO:0030718
            GO:GO:0016578 GO:GO:0004221 GO:GO:0045824 eggNOG:COG5533
            HSSP:P40818 KO:K11855 OrthoDB:EOG4WM38P OMA:PYESASE EMBL:AY051916
            EMBL:BT004507 EMBL:BT010120 EMBL:BT046169 RefSeq:NP_647986.2
            RefSeq:NP_729091.1 RefSeq:NP_729092.1 RefSeq:NP_729093.1
            RefSeq:NP_729094.1 RefSeq:NP_729095.1 UniGene:Dm.6825
            ProteinModelPortal:Q9VRP5 SMR:Q9VRP5 STRING:Q9VRP5 MEROPS:C19.097
            PaxDb:Q9VRP5 GeneID:38648 KEGG:dme:Dmel_CG5505 CTD:38648
            FlyBase:FBgn0260936 InParanoid:Q86NM9 PhylomeDB:Q9VRP5
            GenomeRNAi:38648 NextBio:809699 Bgee:Q9VRP5 Uniprot:Q9VRP5
        Length = 1085

 Score = 322 (118.4 bits), Expect = 2.0e-26, P = 2.0e-26
 Identities = 86/269 (31%), Positives = 134/269 (49%)

Query:     2 PGLHSTFDVVSCLILNAKDGSYPVSPIGILSKIQKIGSHLGHGREEDAHEFLRCAVDTMQ 61
             PG       ++  +L  +     V P  I SK+++I  H+  GR+EDAHEFLR  V+ M+
Sbjct:   215 PGSGCIICAMTKTLLATQSNQSAVRPFLIYSKLKQICKHMVVGRQEDAHEFLRFLVEAME 274

Query:    62 SVCLKEF-GAK--GKIAEETTLIGLTFGGYLRSKIKCLKCLGKSELYERMMDLTVEIDGD 118
                L  F   K   ++ +ETT +G  FGGYLRS+++CL C   S  ++   DL ++I   
Sbjct:   275 RAYLMRFRNYKELDQLVKETTPLGQIFGGYLRSEVRCLSCNHVSITFQHFQDLLLDIR-K 333

Query:   119 IGTLEEALAQFTASEILVGENKYYCSRCKSYEKAKKKLTVLEEPNILTIVLKRFES-GNF 177
               +LE+A     + E L  +  Y C  CK    A K+ ++   P  L I LKRF   GN 
Sbjct:   334 ADSLEDAFEGHFSRERLE-DMGYKCEGCKKKVSATKQFSLERAPITLCIQLKRFSMIGN- 391

Query:   178 GKLNKSVWFPEVLNMAPYMSRT--GDGSPM-YSLYAVVVHLDVTNATFSGHYVCYVKNSH 234
              KL K + F   ++++ Y +R+      P+ Y L ++V HL  +     GHY        
Sbjct:   392 -KLTKQISFKSRIDLSKYAARSQAAQAQPLTYRLVSMVTHLGASQ--HCGHYTAIGSTDT 448

Query:   235 EEWFRIDDSTVIPVKLERVLSEEAYMLLY 263
               ++  DDS V P+ +  V +  AY++ +
Sbjct:   449 GSFYNFDDSYVRPIAMHSVCNTNAYIMFF 477


>TAIR|locus:505006491 [details] [associations]
            symbol:UBP20 "ubiquitin-specific protease 20"
            species:3702 "Arabidopsis thaliana" [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] [GO:0004843
            "ubiquitin-specific protease activity" evidence=ISS] [GO:0005634
            "nucleus" evidence=ISM] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 EMBL:CP002687 GenomeReviews:CT486007_GR
            GO:GO:0008234 EMBL:AL161547 GO:GO:0006511 EMBL:AL021889 PIR:T05075
            GO:GO:0004221 eggNOG:COG5533 HSSP:P54578 KO:K11855 EMBL:AF302668
            IPI:IPI00534291 RefSeq:NP_567544.1 UniGene:At.21461
            ProteinModelPortal:Q9FPS7 SMR:Q9FPS7 MEROPS:C19.A16 PRIDE:Q9FPS7
            EnsemblPlants:AT4G17895.1 GeneID:827513 KEGG:ath:AT4G17895
            GeneFarm:1993 TAIR:At4g17895 HOGENOM:HOG000154757 InParanoid:Q9FPS7
            PhylomeDB:Q9FPS7 Genevestigator:Q9FPS7 Uniprot:Q9FPS7
        Length = 695

 Score = 298 (110.0 bits), Expect = 8.7e-24, P = 8.7e-24
 Identities = 88/304 (28%), Positives = 147/304 (48%)

Query:    24 PVSPIGILSKIQKIGSHLGHGREEDAHEFLRCAVDTMQSVCLKEFGA-KGKIAEETTLIG 82
             P++P      +          ++EDAHEFL+  ++ ++ +C  +  + +G I  +     
Sbjct:   240 PIAPYFFFDNLNYFSPDFQRYQQEDAHEFLQAFLEKLE-ICGSDRTSFRGDITSQDV--- 295

Query:    83 LTFGGYLRSKIKCLKCLGKSELYERMMDLTVEIDGDIGTLEEALAQFTASEILVGENKYY 142
               F G L S ++C  C   SE YE+ + L++EI+ D+ TL  AL  FT  E L  + +  
Sbjct:   296 --FSGRLISGLRCCNCDYVSETYEKSVGLSLEIE-DVDTLGSALESFTRVEKL--DEQLT 350

Query:   143 CSRCKSYEKAKKKLTVLEEPNILTIVLKRFESGNF--GKLNKSVWFPEVLNMAPYMSRTG 200
             C  C      +K+L + + P + T  LKRF++      K+ K V  P  +++ PYM    
Sbjct:   351 CDNCNEKVSKEKQLLLDKLPLVATFHLKRFKNNGLYMEKIYKHVKIPLEIDLQPYMRNIQ 410

Query:   201 DG--SPMYSLYAVVVHLDVTNATFSGHYVCYVKNSHEEWFRIDDSTVIPVKLERVLSEEA 258
             +   S  Y LYA+V H   + A   GHY  YV+++ + W   DDS V  +  + VLS+++
Sbjct:   411 ENEVSTKYHLYALVEHFGYSVAY--GHYSSYVRSAPKIWHHFDDSKVTRIDEDMVLSQDS 468

Query:   259 YMLLYARHSPRPPALIRNNVSHGVKSKKKNLEAVD-LNNTSKIRSNSYIPSLDSKAQQKP 317
             Y+L YAR   R  + +   +   V++   N      L++++     S I   +     KP
Sbjct:   469 YILFYAREGTRWFSSVYEEMQPLVEASLLNSSPKSVLDSSTNGECLSEISYENGDKASKP 528

Query:   318 CTDS 321
             C DS
Sbjct:   529 C-DS 531


>UNIPROTKB|B4DWJ6 [details] [associations]
            symbol:USP3 "Ubiquitin carboxyl-terminal hydrolase 3"
            species:9606 "Homo sapiens" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00973 PROSITE:PS50235
            GO:GO:0006511 GO:GO:0004221 EMBL:AC118274 EMBL:AC007950
            UniGene:Hs.458499 HGNC:HGNC:12626 HOVERGEN:HBG103589 ChiTaRS:USP3
            EMBL:AK301563 IPI:IPI01010279 SMR:B4DWJ6 STRING:B4DWJ6
            Ensembl:ENST00000539772 Uniprot:B4DWJ6
        Length = 271

 Score = 246 (91.7 bits), Expect = 4.9e-23, Sum P(2) = 4.9e-23
 Identities = 68/212 (32%), Positives = 107/212 (50%)

Query:    78 TTLIGLTFGGYLRSKIKCLKCLGKSELYERMMDLTVEI-------------DGDIGTLEE 124
             +T++   FGG L++++ CL C  +S  ++  +DL+++I             +G + +L +
Sbjct:    58 STVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRSKRSKNQENGPVCSLRD 117

Query:   125 ALAQFTASEILVGENKYYCSRCKSYEKAKKKLTVLEEPNILTIVLKRFESGNF--GKLNK 182
              L  FT  E L     Y C +CK  +K+ KK  + + P +L + LKRF    +   K++ 
Sbjct:   118 CLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDT 177

Query:   183 SVWFP-EVLNMAPYM---SRTGDGSPMYSLYAVVVHLDVTNATFSGHYVCYVKNSHE-EW 237
              V FP   L+M  Y+     +G  S +Y L AVVVH    +   SGHY  Y   +HE  W
Sbjct:   178 YVEFPLRGLDMKCYLLEPENSGPESCLYDLAAVVVHHG--SGVGSGHYTAYA--THEGRW 233

Query:   238 FRIDDSTVIPVKLERVLSEEAYMLLYARHSPR 269
             F  +DSTV     E V+  +AY+L Y  H  +
Sbjct:   234 FHFNDSTVTLTDEETVVKAKAYILFYVEHQAK 265

 Score = 45 (20.9 bits), Expect = 4.9e-23, Sum P(2) = 4.9e-23
 Identities = 7/14 (50%), Positives = 12/14 (85%)

Query:    45 REEDAHEFLRCAVD 58
             +++DAHEF+R  +D
Sbjct:     8 QQQDAHEFMRYLLD 21


>FB|FBgn0013717 [details] [associations]
            symbol:not "non-stop" species:7227 "Drosophila melanogaster"
            [GO:0007412 "axon target recognition" evidence=IMP] [GO:0021782
            "glial cell development" evidence=IMP] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IGI]
            [GO:0004843 "ubiquitin-specific protease activity" evidence=ISS]
            [GO:0008347 "glial cell migration" evidence=IMP] [GO:0016579
            "protein deubiquitination" evidence=IMP] [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] [GO:0008270 "zinc ion
            binding" evidence=IEA] [GO:0006325 "chromatin organization"
            evidence=IMP] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IMP] [GO:0005515 "protein binding"
            evidence=IPI] [GO:0000124 "SAGA complex" evidence=IDA] [GO:0016578
            "histone deubiquitination" evidence=IMP] [GO:0007411 "axon
            guidance" evidence=IMP] [GO:0005634 "nucleus" evidence=IDA]
            InterPro:IPR001394 InterPro:IPR001607 InterPro:IPR015880
            InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271 SMART:SM00355
            GO:GO:0007411 GO:GO:0045893 EMBL:AE014296 GO:GO:0046872
            GO:GO:0008270 GO:GO:0008234 GO:GO:0006351 GO:GO:0000124
            Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511 GO:GO:0008347
            GO:GO:0016578 GO:GO:0004221 GO:GO:0007412 eggNOG:COG5533
            GO:GO:0021782 EMBL:AF179590 EMBL:AY058707 RefSeq:NP_524140.2
            UniGene:Dm.2731 HSSP:P54578 ProteinModelPortal:Q9VVR1 SMR:Q9VVR1
            IntAct:Q9VVR1 MINT:MINT-6179419 STRING:Q9VVR1 MEROPS:C19.095
            PaxDb:Q9VVR1 PRIDE:Q9VVR1 GeneID:40030 KEGG:dme:Dmel_CG4166
            UCSC:CG4166-RB CTD:40030 FlyBase:FBgn0013717 InParanoid:Q9U6Q9
            KO:K11366 OrthoDB:EOG4M37QR GenomeRNAi:40030 NextBio:816633
            Bgee:Q9VVR1 Uniprot:Q9VVR1
        Length = 735

 Score = 268 (99.4 bits), Expect = 1.3e-22, Sum P(2) = 1.3e-22
 Identities = 62/198 (31%), Positives = 106/198 (53%)

Query:    80 LIGLTFGGYLRSKIKCLKCLGKSELYERMMDLTVEID-----GDIG--TLEEALAQFTAS 132
             +I   F G L+S + C  C G S  Y+   D+++++      G +   TL + L ++T +
Sbjct:   536 IIDQIFTGMLQSDVVCQACNGVSTTYDPFWDISLDLGETTTHGGVTPKTLIDCLERYTRA 595

Query:   133 EILVGENKYYCSRCKSYEKAKKKLTVLEEPNILTIVLKRFESGNF--GKLNKSVWFPEVL 190
             E L    K  CS CKSY+++ K+ ++   P++++  LKRFE       K++  + FP   
Sbjct:   596 EHLGSAAKIKCSTCKSYQESTKQFSLRTLPSVVSFHLKRFEHSALIDRKISSFIQFPVEF 655

Query:   191 NMAPYMS--RTGDGSPMYSLYAVVVHLDVTNATFSGHYVCYVKNSHEEWFRIDDSTVIPV 248
             +M P+MS  +   G   +SLYAVV H+   +   +GHY  YV++  + W + DD  +   
Sbjct:   656 DMTPFMSEKKNAYGDFRFSLYAVVNHVGTID---TGHYTAYVRHQKDTWVKCDDHVITMA 712

Query:   249 KLERVLSEEAYMLLYARH 266
              L++VL  E Y+L Y ++
Sbjct:   713 SLKQVLDSEGYLLFYHKN 730

 Score = 65 (27.9 bits), Expect = 1.3e-22, Sum P(2) = 1.3e-22
 Identities = 19/57 (33%), Positives = 26/57 (45%)

Query:    11 VSCLILNAKDGSY-PVSPIGILSKIQKIGSHLGHGREEDAHEFLRCAVDTMQSVCLK 66
             VS L      GS  P+S   +L  I     HL    ++DAHEF    +D +   C+K
Sbjct:   445 VSRLFQEFYSGSRSPLSLHRLLHLIWNHAKHLAGYEQQDAHEFFIATLDVLHRHCVK 501


>RGD|1304979 [details] [associations]
            symbol:Usp8 "ubiquitin specific peptidase 8" species:10116
            "Rattus norvegicus" [GO:0000281 "cytokinesis after mitosis"
            evidence=ISO] [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=IEA] [GO:0004843 "ubiquitin-specific protease activity"
            evidence=ISO] [GO:0005622 "intracellular" evidence=ISO] [GO:0005737
            "cytoplasm" evidence=ISO] [GO:0005769 "early endosome"
            evidence=ISO] [GO:0005829 "cytosol" evidence=ISO] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA]
            [GO:0007032 "endosome organization" evidence=ISO] [GO:0007265 "Ras
            protein signal transduction" evidence=ISO] [GO:0008234
            "cysteine-type peptidase activity" evidence=IEA] [GO:0016579
            "protein deubiquitination" evidence=ISO] [GO:0019897 "extrinsic to
            plasma membrane" evidence=ISO] [GO:0030496 "midbody" evidence=ISO]
            [GO:0031313 "extrinsic to endosome membrane" evidence=ISO]
            [GO:0070536 "protein K63-linked deubiquitination" evidence=ISO]
            [GO:0071108 "protein K48-linked deubiquitination" evidence=ISO]
            [GO:0001669 "acrosomal vesicle" evidence=ISO] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 RGD:1304979 GO:GO:0008234 GO:GO:0006511
            GO:GO:0004221 IPI:IPI00782723 Ensembl:ENSRNOT00000057174
            UCSC:RGD:1304979 ArrayExpress:D4A7S5 Uniprot:D4A7S5
        Length = 416

 Score = 274 (101.5 bits), Expect = 7.5e-22, P = 7.5e-22
 Identities = 76/260 (29%), Positives = 121/260 (46%)

Query:    21 GSYP-VSPIGILSKIQKIGSHLGHGREEDAHEFLRCAVDTMQSVCLKEFGAKGKIAEE-- 77
             G Y  +SP      I KI        ++D+ E L   +D +     K      +   +  
Sbjct:   154 GQYRYISPKDFKVTIGKINDQFAGSSQQDSQELLLFLMDGLHEDLNKVRVGHTRTGHQIP 213

Query:    78 ---TTLIGLTFGGYLRSKIKCLKCLGKSELYERMMDLTVEIDGDIG-TLEEALAQFTASE 133
                 ++I   F G  +S ++CL C  KS  +E  M L++ +      TL++ L  F+  E
Sbjct:   214 LQMVSIIVALFQGQFKSTVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKEE 273

Query:   134 ILVGENKYYCSRCKSYEKAKKKLTVLEEPNILTIVLKRFE-SGNFG-KLNKSVWFP-EVL 190
              L   N++YCS C++   + KK+ + + P +L + LKRF   G +  KL  SV FP E L
Sbjct:   274 KLTDNNRFYCSHCRARRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLENL 333

Query:   191 NMAPYMSRTGDGSPMYSLYAVVVHLDVTNATFSGHYVCYVKNS-HEEWFRIDDSTVIPVK 249
             +++ Y+         Y+L++V  H    +    GHY  Y KN+  + WF+ DD  V  + 
Sbjct:   334 DLSQYVIGPKSSLKKYNLFSVSNHYGGLDG---GHYTAYCKNAARQRWFKFDDHEVSDIS 390

Query:   250 LERVLSEEAYMLLYARHSPR 269
             +  V S  AY+L Y    PR
Sbjct:   391 VSSVRSSAAYILFYTSLGPR 410


>UNIPROTKB|O57429 [details] [associations]
            symbol:USP2 "Ubiquitin carboxyl-terminal hydrolase 2"
            species:9031 "Gallus gallus" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0046872 "metal ion binding"
            evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
            evidence=IEA] [GO:0004843 "ubiquitin-specific protease activity"
            evidence=IDA] [GO:0016579 "protein deubiquitination" evidence=IDA]
            InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 GO:GO:0048471 GO:GO:0046872
            GO:GO:0006511 GO:GO:0004843 GO:GO:0016579 GO:GO:0004221
            eggNOG:COG5560 HOVERGEN:HBG011164 MEROPS:C19.013 EMBL:AF016107
            IPI:IPI00577228 UniGene:Gga.454 ProteinModelPortal:O57429
            SMR:O57429 Uniprot:O57429
        Length = 357

 Score = 251 (93.4 bits), Expect = 9.3e-22, Sum P(2) = 9.3e-22
 Identities = 66/200 (33%), Positives = 103/200 (51%)

Query:    77 ETTLIGLTFGGYLRSKIKCLKCLGKSELYERMMDLTVEID----GDIGTLEEALAQFTAS 132
             E + +   F G L+S + C +C   S  ++   DL++ I     G++ TL + L  FT  
Sbjct:   159 EDSRVSDLFVGQLKSSLTCSECGYCSTAFDPFWDLSLPIPKKGYGEV-TLMDCLRLFTKE 217

Query:   133 EILVGENKYYCSRCKSYEKAKKKLTVLEEPNILTIVLKRFESGNF--GKLNKSVWFP-EV 189
             ++L G+ K  C RCK+  +  KK ++ + P IL + LKRF        KL   V FP + 
Sbjct:   218 DVLDGDEKPTCCRCKARTRCTKKFSIQKFPKILVLHLKRFSEARIRASKLTTFVNFPLKD 277

Query:   190 LNMAPYMSRTGDGSPMYSLYAVVVHLDVTNATFSGHYVCYVKNS-HEEWFRIDDSTVIPV 248
             L++  + S++ + + +Y+LYAV  H   +  T  GHY  Y K+    EW   +DS V P+
Sbjct:   278 LDLREFASQSCNHA-VYNLYAVSNH---SGTTMGGHYTAYCKSPISSEWHSFNDSRVTPM 333

Query:   249 KLERVLSEEAYMLLYARHSP 268
                 V S +AY+L Y   SP
Sbjct:   334 SSSHVRSSDAYLLFYELASP 353

 Score = 50 (22.7 bits), Expect = 9.3e-22, Sum P(2) = 9.3e-22
 Identities = 12/34 (35%), Positives = 18/34 (52%)

Query:    25 VSPIGILSKIQKIGSHLGHGREEDAHEFLRCAVD 58
             VSP    ++IQ+         ++DA EFLR  +D
Sbjct:    86 VSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLD 119


>UNIPROTKB|E1BF70 [details] [associations]
            symbol:USP8 "Ubiquitin carboxyl-terminal hydrolase"
            species:9913 "Bos taurus" [GO:0008234 "cysteine-type peptidase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 GO:GO:0008234 GO:GO:0006511 GO:GO:0004221
            GeneTree:ENSGT00670000097591 EMBL:DAAA02029069 EMBL:DAAA02029070
            IPI:IPI00825651 Ensembl:ENSBTAT00000015809 ArrayExpress:E1BF70
            Uniprot:E1BF70
        Length = 421

 Score = 273 (101.2 bits), Expect = 1.1e-21, P = 1.1e-21
 Identities = 67/204 (32%), Positives = 106/204 (51%)

Query:    71 KGKIAEETTLIGLTFGGYLRSKIKCLKCLGKSELYERMMDLTVEIDGDIG-TLEEALAQF 129
             K K   E+ ++ L F G  +S ++CL C  KS  +E  M L++ +      TL++ L  F
Sbjct:   216 KHKQLNESIIVAL-FQGQFKSTVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLF 274

Query:   130 TASEILVGENKYYCSRCKSYEKAKKKLTVLEEPNILTIVLKRFE-SGNFG-KLNKSVWFP 187
             +  E L   N++YCS C++   + KK+ + + P +L + LKRF   G +  KL  SV FP
Sbjct:   275 SKEEKLTDNNRFYCSHCRARRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFP 334

Query:   188 -EVLNMAPYMSRTGDGSPMYSLYAVVVHLDVTNATFSGHYVCYVKNS-HEEWFRIDDSTV 245
              E L+++ Y+    +    Y+L++V  H    +    GHY  Y KN+  + WF+ DD  V
Sbjct:   335 LENLDLSQYVIGPKNNLKKYNLFSVSNHYGGLDG---GHYTAYCKNAARQRWFKFDDHEV 391

Query:   246 IPVKLERVLSEEAYMLLYARHSPR 269
               + +  V S  AY+L Y    PR
Sbjct:   392 SDISISSVKSSAAYILFYTSLGPR 415


>POMBASE|SPAC13A11.04c [details] [associations]
            symbol:ubp8 "SAGA complex ubiquitin C-terminal
            hydrolase Ubp8" species:4896 "Schizosaccharomyces pombe"
            [GO:0000124 "SAGA complex" evidence=IDA] [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=ISM] [GO:0004843
            "ubiquitin-specific protease activity" evidence=IDA] [GO:0005634
            "nucleus" evidence=IDA] [GO:0005654 "nucleoplasm" evidence=IDA]
            [GO:0006338 "chromatin remodeling" evidence=IC] [GO:0006357
            "regulation of transcription from RNA polymerase II promoter"
            evidence=EXP;IC] [GO:0006511 "ubiquitin-dependent protein catabolic
            process" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
            [GO:0016573 "histone acetylation" evidence=IC] [GO:0016579 "protein
            deubiquitination" evidence=IDA] [GO:0035616 "histone H2B conserved
            C-terminal lysine deubiquitination" evidence=ISS]
            InterPro:IPR001394 InterPro:IPR001607 InterPro:IPR018200
            Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 PROSITE:PS50271 SMART:SM00290 PomBase:SPAC13A11.04c
            EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0046872 GO:GO:0008270
            GO:GO:0016573 GO:GO:0006357 GO:GO:0006338 GO:GO:0000124
            Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511 GO:GO:0004843
            GO:GO:0004221 eggNOG:COG5077 KO:K11366 OMA:IHEHAKA PIR:T37611
            RefSeq:NP_592992.1 ProteinModelPortal:Q09738 STRING:Q09738
            MEROPS:C19.A61 EnsemblFungi:SPAC13A11.04c.1 GeneID:2542135
            KEGG:spo:SPAC13A11.04c OrthoDB:EOG4X3M8J NextBio:20803207
            GO:GO:0035616 Uniprot:Q09738
        Length = 449

 Score = 271 (100.5 bits), Expect = 3.0e-21, P = 3.0e-21
 Identities = 79/252 (31%), Positives = 126/252 (50%)

Query:    15 ILNAKDGSYPVSPIGILSKIQKIGSHLGHGREEDAHEFLRCAVDTMQSVCLKEFGAKGKI 74
             I N+K+ S    P  +L+ + K+   L    ++D HEF    +D M +    E G  G  
Sbjct:   200 IYNSKNKSTFYGPTAVLNLMWKLSKSLCGYSQQDGHEFFVYLLDQMHT----ESGG-GTS 254

Query:    75 AEETTLIGLTFGGYLRSKIKCLKCLGKSELYERMMDLTVEIDGDIGTLEEALAQFTASEI 134
                T  I   F G L++ + CL C  +    + +MD++++I+    TL+  L +F + E 
Sbjct:   255 MPCTCPIHRIFSGSLKNVVTCLDCKKERVAVDPLMDISLDINEP--TLQGCLERFVSKEK 312

Query:   135 LVGENKYYCSRCKSYEKAKKKLTVLEEPNILTIVLKRFESGNFG---KLNKSVWFPEVLN 191
             +    +Y C  C S + A K+L   + P  + + LKRFE  NF    K++K V +P  L 
Sbjct:   313 V----QYSCHSCGS-KNAIKQLVFDKLPPTICMQLKRFEQNNFAMSTKIDKQVSYPAFLR 367

Query:   192 MAPYMSRTGDGSPMYSLYAVVVHLDVTNATFSGHYVCYVKNSHEEWFRIDDSTVIPVKLE 251
             M  Y     D    Y LY+VV H    +   +GHY+ Y    ++ WF +DD+T++ VK  
Sbjct:   368 MR-YNFNQDDVD--YQLYSVVCHKGTLD---TGHYIAYTYYQNQ-WFLLDDTTIVEVKES 420

Query:   252 RVLSEEAYMLLY 263
              VL+ +AY+L Y
Sbjct:   421 EVLNSQAYLLFY 432


>SGD|S000004836 [details] [associations]
            symbol:UBP8 "Ubiquitin-specific protease that is a component
            of the SAGA complex" species:4932 "Saccharomyces cerevisiae"
            [GO:0000124 "SAGA complex" evidence=IDA] [GO:0004843
            "ubiquitin-specific protease activity" evidence=IMP] [GO:0046695
            "SLIK (SAGA-like) complex" evidence=IDA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0008233 "peptidase activity" evidence=IEA] [GO:0046872 "metal
            ion binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0004221 "ubiquitin thiolesterase activity" evidence=IEA]
            [GO:0006511 "ubiquitin-dependent protein catabolic process"
            evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
            [GO:0032947 "protein complex scaffold" evidence=IMP;IDA]
            [GO:0006508 "proteolysis" evidence=IEA] [GO:0008234 "cysteine-type
            peptidase activity" evidence=IEA] [GO:0016787 "hydrolase activity"
            evidence=IEA] [GO:0034729 "histone H3-K79 methylation"
            evidence=IMP] [GO:0051568 "histone H3-K4 methylation" evidence=IMP]
            [GO:0071819 "DUBm complex" evidence=IDA] [GO:0016578 "histone
            deubiquitination" evidence=IMP] InterPro:IPR001394
            InterPro:IPR001607 InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148
            PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271
            SMART:SM00290 SGD:S000004836 GO:GO:0006355 GO:GO:0046872
            GO:GO:0008270 GO:GO:0006351 EMBL:BK006946 GO:GO:0000124
            GO:GO:0046695 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511
            GO:GO:0032947 GO:GO:0051568 GO:GO:0016578 GO:GO:0004843
            GO:GO:0004221 EMBL:Z49939 eggNOG:COG5533 KO:K11366 PDB:3M99
            PDB:3MHH PDB:3MHS PDB:4FIP PDB:4FJC PDB:4FK5 PDBsum:3M99
            PDBsum:3MHH PDBsum:3MHS PDBsum:4FIP PDBsum:4FJC PDBsum:4FK5
            GO:GO:0071819 GO:GO:0034729 GeneTree:ENSGT00690000101718
            OrthoDB:EOG4X3M8J PIR:S57591 RefSeq:NP_013950.1
            ProteinModelPortal:P50102 SMR:P50102 DIP:DIP-1506N IntAct:P50102
            MINT:MINT-393758 STRING:P50102 MEROPS:C19.087 PaxDb:P50102
            PeptideAtlas:P50102 EnsemblFungi:YMR223W GeneID:855263
            KEGG:sce:YMR223W CYGD:YMR223w HOGENOM:HOG000216626 OMA:KANEDWS
            EvolutionaryTrace:P50102 NextBio:978861 Genevestigator:P50102
            GermOnline:YMR223W Uniprot:P50102
        Length = 471

 Score = 271 (100.5 bits), Expect = 3.8e-21, P = 3.8e-21
 Identities = 86/256 (33%), Positives = 127/256 (49%)

Query:    28 IGILSKIQKIGSHLGHGREEDAHEFLRCAVDTM-QSVCL-----KEFG-AKGKIAEETTL 80
             I +L+   KI  +L    ++DAHEF +  ++ + QS  L     KE   A  K  E   +
Sbjct:   217 IYLLTCAWKINQNLAGYSQQDAHEFWQFIINQIHQSYVLDLPNAKEVSRANNKQCE--CI 274

Query:    81 IGLTFGGYLRSKIKCLKCLGKSEL-YERMMDLTVEIDGDIGTLEEALAQFTASEILVGEN 139
             +   F G L S I C  C   S+   +  +DL+++I  D   L E L  F   E L   N
Sbjct:   275 VHTVFEGSLESSIVCPGCQNNSKTTIDPFLDLSLDIK-DKKKLYECLDSFHKKEQLKDFN 333

Query:   140 KYYCSRCKSYEKAKKKLTVLEEPNILTIVLKRFE---SGNFGKLNKSVWFPEVLNMAPYM 196
              Y+C  C S + A K+L + + P++L + LKRFE   +G+  KL+  + FP  LNM  Y 
Sbjct:   334 -YHCGECNSTQDAIKQLGIHKLPSVLVLQLKRFEHLLNGSNRKLDDFIEFPTYLNMKNYC 392

Query:   197 S------RTGDGS-P--MYSLYAVVVHLDVTNATFSGHYVCYVKNSHEEWFRIDDSTVIP 247
             S       + +G  P  +Y L  +V H    N    GHY+ + K S  +WF+ +DS V  
Sbjct:   393 STKEKDKHSENGKVPDIIYELIGIVSHKGTVN---EGHYIAFCKISGGQWFKFNDSMVSS 449

Query:   248 VKLERVLSEEAYMLLY 263
             +  E VL E+AY+L Y
Sbjct:   450 ISQEEVLKEQAYLLFY 465


>UNIPROTKB|E1C0G5 [details] [associations]
            symbol:E1C0G5 "Ubiquitin carboxyl-terminal hydrolase"
            species:9031 "Gallus gallus" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0000281 "cytokinesis after
            mitosis" evidence=IEA] [GO:0004843 "ubiquitin-specific protease
            activity" evidence=IEA] [GO:0005769 "early endosome" evidence=IEA]
            [GO:0005829 "cytosol" evidence=IEA] [GO:0007032 "endosome
            organization" evidence=IEA] [GO:0007265 "Ras protein signal
            transduction" evidence=IEA] [GO:0019897 "extrinsic to plasma
            membrane" evidence=IEA] [GO:0030496 "midbody" evidence=IEA]
            [GO:0070536 "protein K63-linked deubiquitination" evidence=IEA]
            [GO:0071108 "protein K48-linked deubiquitination" evidence=IEA]
            InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 Pfam:PF00581 GO:GO:0007265
            GO:GO:0019897 Gene3D:3.40.250.10 InterPro:IPR001763 SMART:SM00450
            SUPFAM:SSF52821 PROSITE:PS50206 GO:GO:0006511 GO:GO:0005769
            GO:GO:0071108 GO:GO:0070536 GO:GO:0004843 GO:GO:0004221
            GeneTree:ENSGT00670000097591 OMA:KINDQFA InterPro:IPR015063
            Pfam:PF08969 EMBL:AADN02041582 IPI:IPI00592203
            Ensembl:ENSGALT00000009484 Uniprot:E1C0G5
        Length = 1082

 Score = 278 (102.9 bits), Expect = 4.2e-21, P = 4.2e-21
 Identities = 69/204 (33%), Positives = 105/204 (51%)

Query:    71 KGKIAEETTLIGLTFGGYLRSKIKCLKCLGKSELYERMMDLTVEIDGDIG-TLEEALAQF 129
             K K   E+ ++ L F G  +S ++CL C  KS  +E  M L++ +      TL+E L  F
Sbjct:   877 KHKQLNESIIVAL-FQGQFKSTVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQECLRLF 935

Query:   130 TASEILVGENKYYCSRCKSYEKAKKKLTVLEEPNILTIVLKRFE-SGNFG-KLNKSVWFP 187
             +  E L   N++YCS CK+   + KK+ + + P +L + LKRF   G +  KL  SV FP
Sbjct:   936 SKEEKLTDNNRFYCSHCKTRRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFP 995

Query:   188 -EVLNMAPYMSRTGDGSPMYSLYAVVVHLDVTNATFSGHYVCYVKN-SHEEWFRIDDSTV 245
              E L+++ Y+    +    Y+L++V  H    +    GHY  Y KN S + WF+ DD  V
Sbjct:   996 LETLDLSQYVIGPKNNLKRYNLFSVSNHYGGLDG---GHYTAYCKNASKQRWFKFDDHEV 1052

Query:   246 IPVKLERVLSEEAYMLLYARHSPR 269
               +    V S  AY+L Y  +  R
Sbjct:  1053 SEISASSVKSSAAYILFYTSYEQR 1076


>UNIPROTKB|H7BZK6 [details] [associations]
            symbol:USP46 "Ubiquitin carboxyl-terminal hydrolase 46"
            species:9606 "Homo sapiens" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00973 PROSITE:PS50235
            GO:GO:0006511 GO:GO:0004221 HGNC:HGNC:20075 EMBL:AC026448
            ProteinModelPortal:H7BZK6 SMR:H7BZK6 Ensembl:ENST00000451218
            Bgee:H7BZK6 Uniprot:H7BZK6
        Length = 339

 Score = 251 (93.4 bits), Expect = 6.4e-21, P = 6.4e-21
 Identities = 79/256 (30%), Positives = 125/256 (48%)

Query:    25 VSPIGILSKIQKIGSHLGHGREEDAHEFLRCAVDTMQSVCLKEFGAK---GKI------- 74
             + P   +S+++K      +  ++DAHEFL   ++T+  +  +E   +   GK+       
Sbjct:    70 IPPKKFISRLRKENDLFDNYMQQDAHEFLNYLLNTIADILQEEKKQEKQNGKLKNGNMNE 129

Query:    75 -AE----ETTLIGLTFGGYLRSKIKCLKCLGKSELYERMMDLTVEIDGDIGTLEEALAQF 129
              AE    E T +   F G L ++ +CL C   S   E  +DL+V+++ +  ++   L  F
Sbjct:   130 PAENNKPELTWVHEIFQGTLTNETRCLNCETVSSKDEDFLDLSVDVEQNT-SITHCLRDF 188

Query:   130 TASEILVGENKYYCSRCKSYEKAKKKLTVLEEPNILTIVLKRF----ESGNFGKLNKSVW 185
             + +E L  E KYYC  C S ++A+K++ V + P IL + LKRF    +   + KL+  V 
Sbjct:   189 SNTETLCSEQKYYCETCCSKQEAQKRMRVKKLPMILALHLKRFKYMEQLHRYTKLSYRVV 248

Query:   186 FPEVLNMAPYMSRTGDGSPMYSLYAVVVHLDVTNATFSGHYVCYVKNSHEEWFRIDDSTV 245
             FP  L +    S   +   MY L AVVVH    +    GHY+  VK SH  W   DD  V
Sbjct:   249 FPLELRLFNTSSDAVNLDRMYDLVAVVVHCG--SGPNRGHYITIVK-SHGFWLLFDDDIV 305

Query:   246 IPVKLERVLSEEAYML 261
               +  + +  EE Y L
Sbjct:   306 EKIDAQAI--EEFYGL 319


>UNIPROTKB|F1RYL9 [details] [associations]
            symbol:USP8 "Ubiquitin carboxyl-terminal hydrolase"
            species:9823 "Sus scrofa" [GO:0071108 "protein K48-linked
            deubiquitination" evidence=IEA] [GO:0070536 "protein K63-linked
            deubiquitination" evidence=IEA] [GO:0030496 "midbody" evidence=IEA]
            [GO:0019897 "extrinsic to plasma membrane" evidence=IEA]
            [GO:0007265 "Ras protein signal transduction" evidence=IEA]
            [GO:0007032 "endosome organization" evidence=IEA] [GO:0005829
            "cytosol" evidence=IEA] [GO:0005769 "early endosome" evidence=IEA]
            [GO:0004843 "ubiquitin-specific protease activity" evidence=IEA]
            [GO:0000281 "cytokinesis after mitosis" evidence=IEA] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA]
            [GO:0004221 "ubiquitin thiolesterase activity" evidence=IEA]
            InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 Pfam:PF00581 GO:GO:0007265
            GO:GO:0019897 Gene3D:3.40.250.10 InterPro:IPR001763 SMART:SM00450
            SUPFAM:SSF52821 PROSITE:PS50206 GO:GO:0006511 GO:GO:0005769
            GO:GO:0071108 GO:GO:0070536 GO:GO:0004843 GO:GO:0004221
            GeneTree:ENSGT00670000097591 OMA:KINDQFA InterPro:IPR015063
            Pfam:PF08969 EMBL:CU469118 EMBL:CU582768 Ensembl:ENSSSCT00000005124
            Uniprot:F1RYL9
        Length = 1089

 Score = 276 (102.2 bits), Expect = 7.2e-21, P = 7.2e-21
 Identities = 68/204 (33%), Positives = 106/204 (51%)

Query:    71 KGKIAEETTLIGLTFGGYLRSKIKCLKCLGKSELYERMMDLTVEIDGDIG-TLEEALAQF 129
             K K   E+ ++ L F G  +S ++CL C  KS  +E  M L++ +      TL++ L  F
Sbjct:   884 KHKQLNESIIVAL-FQGQFKSTVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLF 942

Query:   130 TASEILVGENKYYCSRCKSYEKAKKKLTVLEEPNILTIVLKRFE-SGNFG-KLNKSVWFP 187
             +  E L   N++YCS C++   + KK+ + + P +L + LKRF   G +  KL  SV FP
Sbjct:   943 SKEEKLTDNNRFYCSHCRARRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFP 1002

Query:   188 -EVLNMAPYMSRTGDGSPMYSLYAVVVHLDVTNATFSGHYVCYVKNS-HEEWFRIDDSTV 245
              E L++A Y+    +    Y+L++V  H    +    GHY  Y KN+  + WF+ DD  V
Sbjct:  1003 LENLDLAQYVIGPKNNLKKYNLFSVSNHYGGLDG---GHYTAYCKNAARQRWFKFDDHEV 1059

Query:   246 IPVKLERVLSEEAYMLLYARHSPR 269
               + +  V S  AY+L Y    PR
Sbjct:  1060 SDISISSVKSSAAYILFYTSLGPR 1083


>POMBASE|SPBC1703.12 [details] [associations]
            symbol:ubp9 "ubiquitin C-terminal hydrolase Ubp9"
            species:4896 "Schizosaccharomyces pombe" [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] [GO:0004843
            "ubiquitin-specific protease activity" evidence=ISM] [GO:0005515
            "protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
            [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005829 "cytosol"
            evidence=IDA] [GO:0006511 "ubiquitin-dependent protein catabolic
            process" evidence=IEA] [GO:0006897 "endocytosis" evidence=IMP]
            [GO:0016579 "protein deubiquitination" evidence=IDA] [GO:0030428
            "cell septum" evidence=IEA] [GO:0032153 "cell division site"
            evidence=IDA] [GO:0034613 "cellular protein localization"
            evidence=IMP] [GO:0051286 "cell tip" evidence=IDA]
            InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 PomBase:SPBC1703.12 GO:GO:0005829
            GO:GO:0005634 GO:GO:0034613 GO:GO:0032153 GO:GO:0051286
            EMBL:CU329671 GO:GO:0006897 GenomeReviews:CU329671_GR GO:GO:0006511
            GO:GO:0030428 GO:GO:0004843 GO:GO:0016579 GO:GO:0004221 KO:K11872
            OrthoDB:EOG43XZCS eggNOG:COG5077 PIR:T50325 RefSeq:NP_596207.1
            ProteinModelPortal:Q9P7V9 STRING:Q9P7V9 MEROPS:C19.A62
            EnsemblFungi:SPBC1703.12.1 GeneID:2540120 KEGG:spo:SPBC1703.12
            OMA:ASAFHEL NextBio:20801256 Uniprot:Q9P7V9
        Length = 585

 Score = 271 (100.5 bits), Expect = 8.0e-21, P = 8.0e-21
 Identities = 83/306 (27%), Positives = 143/306 (46%)

Query:    20 DGSYPV-SPIGILSKIQKIGSHLGHGREEDAHEFLRCAVDTMQSVCLKEFGAKGKIAEET 78
             D  Y + SP   +  +++        +++DAHEF    ++++     + +G    +    
Sbjct:   169 DCRYGICSPERFIQVLRRDNEAFRSTQQQDAHEFFNFLLNSVTETLDEYYGNHSDVMHPK 228

Query:    79 TLIGLTFGGYLRSKIKCLKCLGKSELYERMMDLTVEIDGDIGTLEEALAQFTASEILVGE 138
              +  L F G L S+ KCL C   +   E  +DL+++I+    ++   L  F+ASE+L  +
Sbjct:   229 WVHSL-FEGTLTSETKCLTCENITSRDESFLDLSIDIENHT-SVTSCLRSFSASEMLSSK 286

Query:   139 NKYYCSRCKSYEKAKKKLTVLEEPNILTIVLKRFESGN----FGKLNKSVWFPEVLNMAP 194
             NK++C  CKS ++A+K++ + + P IL++ LKRF+         KL  ++ F   + +  
Sbjct:   287 NKFHCDVCKSLQEAEKRMKIKKLPKILSLHLKRFKYNETQEGHDKLFYTIVFTNEMRLFT 346

Query:   195 YMSRTGDGSPMYSLYAVVVHLDVTNATFSGHYVCYVKNSHEEWFRIDDSTVIPVK---LE 251
                   +   MY L +V+VH  V      GHYV  V+     W   DD  V PV    L+
Sbjct:   347 TTEDAENAERMYYLSSVIVH--VGGGPHRGHYVSIVRTKTYGWVLFDDENVTPVNENYLQ 404

Query:   252 RVLSEE-----AYMLLYARHSPRPPALIRNNVSHGVK-----SKKKNLEAVDLNNTSKI- 300
             R   ++     AY+L Y         +   +    +K     S+ K  E+V+++N S   
Sbjct:   405 RFFGDQPGQATAYVLFYTAADEEDDDVSEVDTKESIKPMSIPSQLKQ-ESVEVSNLSSTP 463

Query:   301 RSNSYI 306
             RSNS I
Sbjct:   464 RSNSTI 469


>MGI|MGI:1934029 [details] [associations]
            symbol:Usp8 "ubiquitin specific peptidase 8" species:10090
            "Mus musculus" [GO:0000281 "cytokinesis after mitosis"
            evidence=ISO] [GO:0001669 "acrosomal vesicle" evidence=IDA]
            [GO:0004221 "ubiquitin thiolesterase activity" evidence=IEA]
            [GO:0004843 "ubiquitin-specific protease activity"
            evidence=ISO;IDA] [GO:0005515 "protein binding" evidence=IPI]
            [GO:0005622 "intracellular" evidence=IDA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005768
            "endosome" evidence=IEA] [GO:0005769 "early endosome" evidence=ISO]
            [GO:0005829 "cytosol" evidence=ISO;IDA] [GO:0005886 "plasma
            membrane" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
            [GO:0006511 "ubiquitin-dependent protein catabolic process"
            evidence=IEA] [GO:0007032 "endosome organization" evidence=ISO;IMP]
            [GO:0007049 "cell cycle" evidence=IEA] [GO:0007265 "Ras protein
            signal transduction" evidence=IPI] [GO:0008233 "peptidase activity"
            evidence=IEA] [GO:0008234 "cysteine-type peptidase activity"
            evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016579
            "protein deubiquitination" evidence=ISO;IDA;IMP] [GO:0016787
            "hydrolase activity" evidence=IEA] [GO:0017124 "SH3 domain binding"
            evidence=IEA] [GO:0019897 "extrinsic to plasma membrane"
            evidence=ISO] [GO:0030496 "midbody" evidence=ISO;IDA] [GO:0031313
            "extrinsic to endosome membrane" evidence=IDA] [GO:0070536 "protein
            K63-linked deubiquitination" evidence=ISO] [GO:0071108 "protein
            K48-linked deubiquitination" evidence=ISO] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 Pfam:PF00581 MGI:MGI:1934029 GO:GO:0005829
            GO:GO:0005886 GO:GO:0005634 GO:GO:0007265 GO:GO:0007049
            Gene3D:3.40.250.10 InterPro:IPR001763 SMART:SM00450 SUPFAM:SSF52821
            PROSITE:PS50206 GO:GO:0006511 GO:GO:0030496 GO:GO:0007032
            GO:GO:0004843 GO:GO:0016579 GO:GO:0004221 eggNOG:COG5533 KO:K11839
            GO:GO:0031313 EMBL:AL732330 GeneTree:ENSGT00670000097591
            MEROPS:C19.011 CTD:9101 HOGENOM:HOG000231497 HOVERGEN:HBG012631
            OrthoDB:EOG4XKV6B InterPro:IPR015063 Pfam:PF08969 EMBL:AB045709
            EMBL:AF057146 EMBL:AK122195 EMBL:BC027052 EMBL:BC050947
            EMBL:BC061465 EMBL:BC066126 IPI:IPI00171977 RefSeq:NP_062703.2
            UniGene:Mm.272629 UniGene:Mm.490069 ProteinModelPortal:Q80U87
            SMR:Q80U87 IntAct:Q80U87 MINT:MINT-144852 STRING:Q80U87
            PhosphoSite:Q80U87 PaxDb:Q80U87 PRIDE:Q80U87
            Ensembl:ENSMUST00000028841 GeneID:84092 KEGG:mmu:84092
            UCSC:uc008meb.1 NextBio:350878 Bgee:Q80U87 CleanEx:MM_USP8
            Genevestigator:Q80U87 GermOnline:ENSMUSG00000027363 Uniprot:Q80U87
        Length = 1080

 Score = 275 (101.9 bits), Expect = 9.3e-21, P = 9.3e-21
 Identities = 73/246 (29%), Positives = 121/246 (49%)

Query:    29 GILSKIQKIGSHLGHGREEDAHEFLRCAVDTMQSVCLKEFGAKGKIAEETTLIGLTFGGY 88
             G+   + K  +   H  E + H      +D +Q+   +    K K   E+ ++ L F G 
Sbjct:   841 GLHEDLNKADNRKRHKEENNEH------LDDLQAA--EHAWQKHKQLNESIIVAL-FQGQ 891

Query:    89 LRSKIKCLKCLGKSELYERMMDLTVEIDGDIG-TLEEALAQFTASEILVGENKYYCSRCK 147
              +S ++CL C  +S  +E  M L++ +      TL++ L  F+  E L   N++YCS C+
Sbjct:   892 FKSTVQCLTCRRRSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKEEKLTDNNRFYCSHCR 951

Query:   148 SYEKAKKKLTVLEEPNILTIVLKRFE-SGNFG-KLNKSVWFP-EVLNMAPYMSRTGDGSP 204
             +   + KK+ + + P +L + LKRF   G +  KL  SV FP E L+++ Y+    +   
Sbjct:   952 ARRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLENLDLSQYVIGPKNSLK 1011

Query:   205 MYSLYAVVVHLDVTNATFSGHYVCYVKNS-HEEWFRIDDSTVIPVKLERVLSEEAYMLLY 263
              Y+L++V  H    +    GHY  Y KN+  + WF+ DD  V  + +  V S  AY+L Y
Sbjct:  1012 KYNLFSVSNHYGGLDG---GHYTAYCKNAARQRWFKFDDHEVSDISVSSVRSSAAYILFY 1068

Query:   264 ARHSPR 269
                 PR
Sbjct:  1069 TSLGPR 1074


>UNIPROTKB|E9PEW0 [details] [associations]
            symbol:USP36 "Ubiquitin carboxyl-terminal hydrolase 36"
            species:9606 "Homo sapiens" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0005730 "nucleolus"
            evidence=IDA] InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443
            PROSITE:PS00973 PROSITE:PS50235 GO:GO:0005730 GO:GO:0006511
            GO:GO:0004221 EMBL:AC022966 HGNC:HGNC:20062 IPI:IPI00902886
            ProteinModelPortal:E9PEW0 SMR:E9PEW0 Ensembl:ENST00000449938
            ArrayExpress:E9PEW0 Bgee:E9PEW0 Uniprot:E9PEW0
        Length = 728

 Score = 272 (100.8 bits), Expect = 1.0e-20, P = 1.0e-20
 Identities = 54/124 (43%), Positives = 82/124 (66%)

Query:   143 CSRCKSYEKAKKKLTVLEEPNILTIVLKRFESGNFGKLNKSVWFPEVLNMAPYMSRTGDG 202
             C++CK    A K+ T+    N+LT+ LKRF + + GK+ K V +PE LN+ PYMS+  +G
Sbjct:     2 CAKCKKKVPASKRFTIHRTSNVLTLSLKRFANFSGGKITKDVGYPEFLNIRPYMSQN-NG 60

Query:   203 SP-MYSLYAVVVHLDVTNATFSGHYVCYVKNSHEEWFRIDDSTVIPVKLERVLSEEAYML 261
              P MY LYAV+VH   +    +GHY CYVK S+ +W++++DS V    ++ VL+++AY+L
Sbjct:    61 DPVMYGLYAVLVHSGYS--CHAGHYYCYVKASNGQWYQMNDSLVHSSNVKVVLNQQAYVL 118

Query:   262 LYAR 265
              Y R
Sbjct:   119 FYLR 122


>TAIR|locus:2010622 [details] [associations]
            symbol:UBP2 "ubiquitin-specific protease 2" species:3702
            "Arabidopsis thaliana" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0004843 "ubiquitin-specific protease
            activity" evidence=ISS;IMP] [GO:0005634 "nucleus" evidence=ISM]
            [GO:0006511 "ubiquitin-dependent protein catabolic process"
            evidence=IEA;TAS] [GO:0008270 "zinc ion binding" evidence=IEA]
            [GO:0000502 "proteasome complex" evidence=TAS] [GO:0009507
            "chloroplast" evidence=IDA] InterPro:IPR001394 InterPro:IPR001607
            InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271 EMBL:CP002684
            GenomeReviews:CT485782_GR GO:GO:0009507 GO:GO:0046872 GO:GO:0008270
            GO:GO:0008234 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000502
            GO:GO:0006511 EMBL:AC004809 GO:GO:0004221 eggNOG:COG5533 KO:K11844
            HOGENOM:HOG000090316 EMBL:AF302659 EMBL:AY062463 IPI:IPI00535986
            PIR:H86181 RefSeq:NP_563719.1 UniGene:At.22815
            ProteinModelPortal:Q8W4N3 SMR:Q8W4N3 STRING:Q8W4N3 MEROPS:C19.090
            PaxDb:Q8W4N3 PRIDE:Q8W4N3 EnsemblPlants:AT1G04860.1 GeneID:839397
            KEGG:ath:AT1G04860 TAIR:At1g04860 InParanoid:Q8W4N3 OMA:TVSSTEC
            PhylomeDB:Q8W4N3 ProtClustDB:CLSN2916966 Genevestigator:Q8W4N3
            GermOnline:AT1G04860 Uniprot:Q8W4N3
        Length = 961

 Score = 186 (70.5 bits), Expect = 1.1e-20, Sum P(3) = 1.1e-20
 Identities = 50/128 (39%), Positives = 69/128 (53%)

Query:   152 AKKKLTVLEEPNILTIVLKRFES---GNFGKLNKSVWFPEVLNMAPYM-SR-TGDGSPMY 206
             A KK+ + + P +LTI LKRF     G   KLN  V F EV+++  YM SR +G+  P+Y
Sbjct:   832 ATKKVLINKAPPVLTIHLKRFSQDLRGRLSKLNGHVAFKEVIDLRQYMDSRCSGEDPPVY 891

Query:   207 SLYAVVVHLDVTNATFSGHYVCYVK---------NSHEEWFRIDDSTVIPVKLERVLSEE 257
              L  +V H   +     GHYV YV+         +S   W+ + D+ V  V LE+VL  E
Sbjct:   892 RLAGLVEH---SGTMRGGHYVAYVRGGQRVKETDSSSTAWYNVSDAYVRQVSLEKVLHSE 948

Query:   258 AYMLLYAR 265
             AY+L Y R
Sbjct:   949 AYILFYER 956

 Score = 123 (48.4 bits), Expect = 1.1e-20, Sum P(3) = 1.1e-20
 Identities = 25/73 (34%), Positives = 42/73 (57%)

Query:    46 EEDAHEFLRCAVDTM---QSVCLKEFGAKGKIAEETTLIGLTFGGYLRSKIKCLKCLGKS 102
             + D+HE LRC +D++   +S   K+ G      + TTLI   FGG   S + C++C   S
Sbjct:   313 QHDSHELLRCLLDSLSTEESALRKKRGVSDNDEKSTTLIESVFGGETSSIVSCMECGHSS 372

Query:   103 ELYERMMDLTVEI 115
             ++YE  +DL++ +
Sbjct:   373 KVYEPFLDLSLPV 385

 Score = 60 (26.2 bits), Expect = 1.1e-20, Sum P(3) = 1.1e-20
 Identities = 13/40 (32%), Positives = 20/40 (50%)

Query:   116 DGDIG-TLEEALAQFTASEILVGENKYYCSRCKSYEKAKK 154
             D D+  ++E  L  FT  EIL  +N + C  C    K ++
Sbjct:   704 DSDLPVSVERCLGHFTKHEILSDDNAWNCENCSKNLKLQR 743

 Score = 49 (22.3 bits), Expect = 3.5e-06, Sum P(3) = 3.5e-06
 Identities = 12/35 (34%), Positives = 17/35 (48%)

Query:   443 GHQ--YVSNGSS-RDIDSDRVGWANPSDVRLRRAN 474
             GH   YV  G   ++ DS    W N SD  +R+ +
Sbjct:   906 GHYVAYVRGGQRVKETDSSSTAWYNVSDAYVRQVS 940

 Score = 39 (18.8 bits), Expect = 0.00041, Sum P(3) = 0.00041
 Identities = 13/56 (23%), Positives = 26/56 (46%)

Query:   246 IPVKLERVLSEEAYMLLYARHSPRPPALIRNNVSHGVKSKK--KNLEAVDLNNTSK 299
             +PV  ++   ++   +  A+ +  PP  +  NVS   K  K    +   +LN++ K
Sbjct:   383 LPVPFKKSPPKKPQPVSRAKKAKLPPKRVPKNVSKVSKVSKVLPGMVLSELNSSGK 438

 Score = 38 (18.4 bits), Expect = 0.00052, Sum P(3) = 0.00052
 Identities = 13/50 (26%), Positives = 24/50 (48%)

Query:   268 PRPPALIRNNVSHGVKSKKKNLEAV--DLNNTSKIRSNSYIPSLDSKAQQ 315
             P P  +  ++VS G ++ + N E +  D    +K  +N  +   D +A Q
Sbjct:   525 PSPNIVANSSVSSGDQTLEGNTERLMQDYEEIAKAEAN--LDEKDVQAMQ 572


>ZFIN|ZDB-GENE-041212-59 [details] [associations]
            symbol:usp2a "ubiquitin specific peptidase 2a"
            species:7955 "Danio rerio" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0005575 "cellular_component"
            evidence=ND] [GO:0008233 "peptidase activity" evidence=IEA]
            [GO:0016787 "hydrolase activity" evidence=IEA] [GO:0008234
            "cysteine-type peptidase activity" evidence=IEA] [GO:0006508
            "proteolysis" evidence=IEA] InterPro:IPR001394 InterPro:IPR018200
            Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235
            ZFIN:ZDB-GENE-041212-59 GO:GO:0008234 GO:GO:0006511 GO:GO:0004221
            GeneTree:ENSGT00670000098024 EMBL:BX548078 IPI:IPI00993616
            Ensembl:ENSDART00000123148 ArrayExpress:E7FEC1 Bgee:E7FEC1
            Uniprot:E7FEC1
        Length = 600

 Score = 259 (96.2 bits), Expect = 1.5e-20, Sum P(2) = 1.5e-20
 Identities = 69/208 (33%), Positives = 109/208 (52%)

Query:    66 KEFGAKGKIAEETTLIGLTFGGYLRSKIKCLKCLGKSELYERMMDLTVEID----GDIGT 121
             K+  +K    E++ ++ L F G L+S + C +C   S +++   DL++ I     G++ +
Sbjct:   398 KKMWSKYLEREDSKIVDL-FVGQLKSSLTCSECGYCSTVFDPFWDLSLPIAKKGYGEV-S 455

Query:   122 LEEALAQFTASEILVGENKYYCSRCKSYEKAKKKLTVLEEPNILTIVLKRFESGNF--GK 179
             L + +  FT  ++L G+ K  C RCK+  +  KK TV + P IL + LKRF        K
Sbjct:   456 LMDCMRLFTKEDVLDGDEKPTCYRCKARRRCTKKFTVQKFPKILVLHLKRFSEARIRTSK 515

Query:   180 LNKSVWFP-EVLNMAPYMSRTGDGSPMYSLYAVVVHLDVTNATFSGHYVCYVKNSHE-EW 237
             L+  V FP + L++  + S     S +Y+LYAV  H   +  T  GHY  Y  N    EW
Sbjct:   516 LSTFVNFPMKDLDLREFASDRSS-SAVYNLYAVSNH---SGTTMGGHYTAYCCNPENGEW 571

Query:   238 FRIDDSTVIPVKLERVLSEEAYMLLYAR 265
             +  +DS V P+   +V S +AY+L Y R
Sbjct:   572 YTYNDSRVTPMSASQVRSSDAYVLFYER 599

 Score = 52 (23.4 bits), Expect = 1.5e-20, Sum P(2) = 1.5e-20
 Identities = 13/41 (31%), Positives = 21/41 (51%)

Query:    22 SYPVSPIGILSKIQKIGSHLGHGREEDAHEFLRCAVDTMQS 62
             S  VSP    ++IQ+         ++DA EFLR  +D + +
Sbjct:   332 SEAVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHN 372


>UNIPROTKB|Q0IIM6 [details] [associations]
            symbol:USP8 "Ubiquitin carboxyl-terminal hydrolase"
            species:9913 "Bos taurus" [GO:0071108 "protein K48-linked
            deubiquitination" evidence=IEA] [GO:0070536 "protein K63-linked
            deubiquitination" evidence=IEA] [GO:0030496 "midbody" evidence=IEA]
            [GO:0019897 "extrinsic to plasma membrane" evidence=IEA]
            [GO:0007265 "Ras protein signal transduction" evidence=IEA]
            [GO:0007032 "endosome organization" evidence=IEA] [GO:0005829
            "cytosol" evidence=IEA] [GO:0005769 "early endosome" evidence=IEA]
            [GO:0004843 "ubiquitin-specific protease activity" evidence=IEA]
            [GO:0000281 "cytokinesis after mitosis" evidence=IEA] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA]
            [GO:0004221 "ubiquitin thiolesterase activity" evidence=IEA]
            InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 Pfam:PF00581 GO:GO:0007265
            GO:GO:0019897 Gene3D:3.40.250.10 InterPro:IPR001763 SMART:SM00450
            SUPFAM:SSF52821 PROSITE:PS50206 GO:GO:0006511 GO:GO:0005769
            GO:GO:0071108 GO:GO:0070536 GO:GO:0004843 GO:GO:0004221
            eggNOG:COG5533 KO:K11839 GeneTree:ENSGT00670000097591
            MEROPS:C19.011 CTD:9101 HOGENOM:HOG000231497 HOVERGEN:HBG012631
            OMA:KINDQFA OrthoDB:EOG4XKV6B InterPro:IPR015063 Pfam:PF08969
            EMBL:DAAA02029069 EMBL:DAAA02029070 EMBL:BC122571 IPI:IPI00697060
            RefSeq:NP_001069594.1 UniGene:Bt.9664 SMR:Q0IIM6 STRING:Q0IIM6
            Ensembl:ENSBTAT00000033814 GeneID:538743 KEGG:bta:538743
            InParanoid:Q0IIM6 NextBio:20877551 Uniprot:Q0IIM6
        Length = 1085

 Score = 273 (101.2 bits), Expect = 1.6e-20, P = 1.6e-20
 Identities = 67/204 (32%), Positives = 106/204 (51%)

Query:    71 KGKIAEETTLIGLTFGGYLRSKIKCLKCLGKSELYERMMDLTVEIDGDIG-TLEEALAQF 129
             K K   E+ ++ L F G  +S ++CL C  KS  +E  M L++ +      TL++ L  F
Sbjct:   880 KHKQLNESIIVAL-FQGQFKSTVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLF 938

Query:   130 TASEILVGENKYYCSRCKSYEKAKKKLTVLEEPNILTIVLKRFE-SGNFG-KLNKSVWFP 187
             +  E L   N++YCS C++   + KK+ + + P +L + LKRF   G +  KL  SV FP
Sbjct:   939 SKEEKLTDNNRFYCSHCRARRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFP 998

Query:   188 -EVLNMAPYMSRTGDGSPMYSLYAVVVHLDVTNATFSGHYVCYVKNS-HEEWFRIDDSTV 245
              E L+++ Y+    +    Y+L++V  H    +    GHY  Y KN+  + WF+ DD  V
Sbjct:   999 LENLDLSQYVIGPKNNLKKYNLFSVSNHYGGLDG---GHYTAYCKNAARQRWFKFDDHEV 1055

Query:   246 IPVKLERVLSEEAYMLLYARHSPR 269
               + +  V S  AY+L Y    PR
Sbjct:  1056 SDISISSVKSSAAYILFYTSLGPR 1079


>UNIPROTKB|B4DKA8 [details] [associations]
            symbol:USP8 "Ubiquitin carboxyl-terminal hydrolase"
            species:9606 "Homo sapiens" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0008234 "cysteine-type
            peptidase activity" evidence=IEA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 Pfam:PF00581 GO:GO:0008234 Gene3D:3.40.250.10
            InterPro:IPR001763 SMART:SM00450 SUPFAM:SSF52821 PROSITE:PS50206
            GO:GO:0006511 GO:GO:0004221 UniGene:Hs.443731 HGNC:HGNC:12631
            HOGENOM:HOG000231497 HOVERGEN:HBG012631 ChiTaRS:USP8
            InterPro:IPR015063 Pfam:PF08969 EMBL:AC012170 EMBL:AK296480
            IPI:IPI00941811 SMR:B4DKA8 STRING:B4DKA8 Ensembl:ENST00000425032
            UCSC:uc010ufh.2 Uniprot:B4DKA8
        Length = 1012

 Score = 272 (100.8 bits), Expect = 1.8e-20, P = 1.8e-20
 Identities = 67/204 (32%), Positives = 106/204 (51%)

Query:    71 KGKIAEETTLIGLTFGGYLRSKIKCLKCLGKSELYERMMDLTVEIDGDIG-TLEEALAQF 129
             K K   E+ ++ L F G  +S ++CL C  KS  +E  M L++ +      TL++ L  F
Sbjct:   807 KHKQLNESIIVAL-FQGQFKSTVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLF 865

Query:   130 TASEILVGENKYYCSRCKSYEKAKKKLTVLEEPNILTIVLKRFE-SGNFG-KLNKSVWFP 187
             +  E L   N++YCS C++   + KK+ + + P +L + LKRF   G +  KL  SV FP
Sbjct:   866 SKEEKLTDNNRFYCSHCRARRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFP 925

Query:   188 -EVLNMAPYMSRTGDGSPMYSLYAVVVHLDVTNATFSGHYVCYVKNS-HEEWFRIDDSTV 245
              E L+++ Y+    +    Y+L++V  H    +    GHY  Y KN+  + WF+ DD  V
Sbjct:   926 LENLDLSQYVIGPKNNLKKYNLFSVSNHYGGLDG---GHYTAYCKNAARQRWFKFDDHEV 982

Query:   246 IPVKLERVLSEEAYMLLYARHSPR 269
               + +  V S  AY+L Y    PR
Sbjct:   983 SDISVSSVKSSAAYILFYTSLGPR 1006


>UNIPROTKB|E1BF92 [details] [associations]
            symbol:USP48 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] InterPro:IPR001394
            InterPro:IPR006615 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00973
            PROSITE:PS50235 PROSITE:PS51283 GO:GO:0005739 GO:GO:0005634
            GO:GO:0006511 InterPro:IPR019955 PROSITE:PS50053 GO:GO:0004221
            GeneTree:ENSGT00630000089581 OMA:LSNWPED EMBL:DAAA02006472
            EMBL:DAAA02006473 IPI:IPI00707367 Ensembl:ENSBTAT00000009110
            Uniprot:E1BF92
        Length = 1038

 Score = 272 (100.8 bits), Expect = 1.9e-20, P = 1.9e-20
 Identities = 71/253 (28%), Positives = 131/253 (51%)

Query:    25 VSPIGILSKIQKIGSHLGHGREEDAHEFLRCAVDTMQSVCLKEFGAKGKIAEETTLIGLT 84
             + P G    ++ +G  L  G+++DA EF +  +  ++    K+     K  +   ++   
Sbjct:   163 IDPSGF---VKALG--LDTGQQQDAQEFSKLFMSLLEDTLSKQ-----KNPDVRNIVQQQ 212

Query:    85 FGGYLRSKIKCLKCLGKSELYERMMDLTVEIDGDIGTLEEALAQFTASEILVGENKYYCS 144
             F G       C +C  +S+L  +  +L + I G    L + +++F   E L G+N+Y+C 
Sbjct:   213 FCGEYAYVTVCNQCGRESKLLSKFYELELNIQGH-KQLTDCISEFLKEEKLEGDNRYFCE 271

Query:   145 RCKSYEKAKKKLTVLEEPNILTIVLKRF----ESGNFGKLNKSVWFPEVLNMAPYMSRTG 200
              C+S + A +K+ +L  P  L + L RF    ++G+  KLN  + F E+L+M PY+   G
Sbjct:   272 NCQSKQNATRKIRLLSLPCTLNLQLMRFVFDRQTGHKKKLNTYIGFSEILDMEPYVEHKG 331

Query:   201 DGSPMYSLYAVVVHLDVTNATFSGHYVCYVKNSHE-EWFRIDDSTVIPVKLERV-LSEEA 258
              GS +Y L AV++H  V+   +SGHY+ +VK+    EW++ +D  +  ++ +++ L  E 
Sbjct:   332 -GSYVYELSAVLIHRGVS--AYSGHYIAHVKDPQSGEWYKFNDEDIEKMEGKKLQLGIEE 388

Query:   259 YMLLYARHSPRPP 271
              +   A+   R P
Sbjct:   389 DLAEPAKSQTRKP 401


>ZFIN|ZDB-GENE-050522-197 [details] [associations]
            symbol:usp48 "ubiquitin specific peptidase 48"
            species:7955 "Danio rerio" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0005575 "cellular_component"
            evidence=ND] InterPro:IPR001394 InterPro:IPR006615
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00973 PROSITE:PS50235
            PROSITE:PS51283 SMART:SM00695 ZFIN:ZDB-GENE-050522-197
            GO:GO:0006511 InterPro:IPR019955 PROSITE:PS50053 GO:GO:0004221
            GeneTree:ENSGT00630000089581 EMBL:CU928222 IPI:IPI00961174
            Ensembl:ENSDART00000123591 Uniprot:E7EY58
        Length = 1055

 Score = 272 (100.8 bits), Expect = 2.0e-20, P = 2.0e-20
 Identities = 87/325 (26%), Positives = 149/325 (45%)

Query:    25 VSPIGILSKIQKIGSHLGHGREEDAHEFLRCAVDTMQSVCLKEFGAKGKIAEETTLIGLT 84
             + P G+   ++ +G  L  G+++DA EF +  +  ++    K+     K      +I   
Sbjct:   163 IDPSGL---VKALG--LDTGQQQDAQEFSKLFLSLLEDTLSKQ-----KDPNLQNVIQQQ 212

Query:    85 FGGYLRSKIKCLKCLGKSELYERMMDLTVEIDGDIGTLEEALAQFTASEILVGENKYYCS 144
             F G       C KC  +S L  R  +L + I G    L E + +F   E L G+N+YYC 
Sbjct:   213 FCGQFSYVTVCNKCGRESPLPSRFYELELNIQGH-KNLTECVTEFLKEEKLDGDNRYYCE 271

Query:   145 RCKSYEKAKKKLTVLEEPNILTIVLKRF----ESGNFGKLNKSVWFPEVLNMAPYMSRTG 200
              C+S + A +++ +   P  L   L RF    +SG+  KLN  + FPEVL+M P++    
Sbjct:   272 SCQSKQNATRRIKLQSLPRTLNFQLMRFVFDRQSGHKKKLNTFISFPEVLDMEPFLEGRE 331

Query:   201 DGSPMYSLYAVVVHLDVTNATFSGHYVCYVKNSH-EEWFRIDDSTVIPVKLERV-LSEEA 258
             +    Y L AV++H  V+   +SGHY+ +V+++H  +W++ +D  +  ++ +++ L  E 
Sbjct:   332 EKCT-YELSAVLIHRGVS--AYSGHYIAHVRDAHTNDWYKFNDEEIEKMEGKKLQLGIEE 388

Query:   259 YMLLYARHSPRPPALIRNNVSHGVKSKKKNLEAVDLNNTSKIRSNSYIPSLDSKAQQKPC 318
              +   A+   R P       S G    +     V    T +I        + +   QK  
Sbjct:   389 DIAETAKSQTRKP-----KCSKGYHCSRNAYMLVYKQQTEEINQTESPVDVPAAFLQKLV 443

Query:   319 TDSNQLFDRDEW-KFRSMQRSPAVD 342
                N+ F+  EW    S  R  +VD
Sbjct:   444 EQDNRKFE--EWCSEMSDMRKQSVD 466


>UNIPROTKB|E2RH35 [details] [associations]
            symbol:USP8 "Ubiquitin carboxyl-terminal hydrolase"
            species:9615 "Canis lupus familiaris" [GO:0008234 "cysteine-type
            peptidase activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent
            protein catabolic process" evidence=IEA] [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 Pfam:PF00581 GO:GO:0008234 Gene3D:3.40.250.10
            InterPro:IPR001763 SMART:SM00450 SUPFAM:SSF52821 PROSITE:PS50206
            GO:GO:0006511 GO:GO:0004221 KO:K11839 GeneTree:ENSGT00670000097591
            CTD:9101 OMA:KINDQFA InterPro:IPR015063 Pfam:PF08969
            EMBL:AAEX03016119 RefSeq:XP_535474.1 Ensembl:ENSCAFT00000024054
            GeneID:478299 KEGG:cfa:478299 Uniprot:E2RH35
        Length = 1116

 Score = 272 (100.8 bits), Expect = 2.1e-20, P = 2.1e-20
 Identities = 67/204 (32%), Positives = 106/204 (51%)

Query:    71 KGKIAEETTLIGLTFGGYLRSKIKCLKCLGKSELYERMMDLTVEIDGDIG-TLEEALAQF 129
             K K   E+ ++ L F G  +S ++CL C  KS  +E  M L++ +      TL++ L  F
Sbjct:   911 KHKQLNESIIVAL-FQGQFKSTVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLF 969

Query:   130 TASEILVGENKYYCSRCKSYEKAKKKLTVLEEPNILTIVLKRFE-SGNFG-KLNKSVWFP 187
             +  E L   N++YCS C++   + KK+ + + P +L + LKRF   G +  KL  SV FP
Sbjct:   970 SKEEKLTDNNRFYCSHCRTRRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFP 1029

Query:   188 -EVLNMAPYMSRTGDGSPMYSLYAVVVHLDVTNATFSGHYVCYVKNS-HEEWFRIDDSTV 245
              E L+++ Y+    +    Y+L++V  H    +    GHY  Y KN+  + WF+ DD  V
Sbjct:  1030 LENLDLSQYVIGPKNNLKKYNLFSVSNHYGGLDG---GHYTAYCKNAARQRWFKFDDHEV 1086

Query:   246 IPVKLERVLSEEAYMLLYARHSPR 269
               + +  V S  AY+L Y    PR
Sbjct:  1087 SDISVSSVKSSAAYILFYTSLGPR 1110


>UNIPROTKB|P40818 [details] [associations]
            symbol:USP8 "Ubiquitin carboxyl-terminal hydrolase 8"
            species:9606 "Homo sapiens" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0017124 "SH3 domain binding"
            evidence=IEA] [GO:0007265 "Ras protein signal transduction"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0010008
            "endosome membrane" evidence=IEA] [GO:0004843 "ubiquitin-specific
            protease activity" evidence=IDA] [GO:0005769 "early endosome"
            evidence=IDA] [GO:0007032 "endosome organization" evidence=IMP]
            [GO:0071108 "protein K48-linked deubiquitination" evidence=IDA]
            [GO:0070536 "protein K63-linked deubiquitination" evidence=IDA]
            [GO:0005829 "cytosol" evidence=IDA;TAS] [GO:0019897 "extrinsic to
            plasma membrane" evidence=IDA] [GO:0005515 "protein binding"
            evidence=IPI] [GO:0004197 "cysteine-type endopeptidase activity"
            evidence=TAS] [GO:0008283 "cell proliferation" evidence=TAS]
            [GO:0000281 "cytokinesis after mitosis" evidence=IMP] [GO:0005737
            "cytoplasm" evidence=IDA] [GO:0016579 "protein deubiquitination"
            evidence=IMP] [GO:0030496 "midbody" evidence=IDA]
            InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 Pfam:PF00581 GO:GO:0005829
            GO:GO:0005634 Reactome:REACT_111102 GO:GO:0007265 GO:GO:0008283
            GO:GO:0019897 GO:GO:0010008 Gene3D:3.40.250.10 InterPro:IPR001763
            SMART:SM00450 SUPFAM:SSF52821 PROSITE:PS50206 GO:GO:0000281
            GO:GO:0006511 GO:GO:0030496 GO:GO:0007032 GO:GO:0005769
            GO:GO:0071108 GO:GO:0070536 GO:GO:0004197 GO:GO:0004843
            GO:GO:0004221 eggNOG:COG5533 PDB:2GWF PDBsum:2GWF KO:K11839
            PDB:3N3K PDBsum:3N3K BRENDA:3.1.2.15 EMBL:D29956 EMBL:BX537420
            EMBL:BC038801 EMBL:BC051345 EMBL:BC110590 IPI:IPI00030915
            RefSeq:NP_001122082.1 RefSeq:NP_001122083.1 RefSeq:NP_005145.3
            UniGene:Hs.443731 PDB:1WHB PDB:2A9U PDB:2GFO PDBsum:1WHB
            PDBsum:2A9U PDBsum:2GFO ProteinModelPortal:P40818 SMR:P40818
            DIP:DIP-40365N IntAct:P40818 MINT:MINT-244406 STRING:P40818
            MEROPS:C19.011 PhosphoSite:P40818 DMDM:731046 PaxDb:P40818
            PeptideAtlas:P40818 PRIDE:P40818 Ensembl:ENST00000307179
            Ensembl:ENST00000396444 Ensembl:ENST00000433963 GeneID:9101
            KEGG:hsa:9101 UCSC:uc001zyl.4 CTD:9101 GeneCards:GC15P050716
            H-InvDB:HIX0172812 HGNC:HGNC:12631 HPA:HPA004869 MIM:603158
            neXtProt:NX_P40818 PharmGKB:PA37256 HOGENOM:HOG000231497
            HOVERGEN:HBG012631 InParanoid:P40818 OMA:KINDQFA OrthoDB:EOG4XKV6B
            PhylomeDB:P40818 ChiTaRS:USP8 EvolutionaryTrace:P40818
            GenomeRNAi:9101 NextBio:34117 ArrayExpress:P40818 Bgee:P40818
            CleanEx:HS_USP8 Genevestigator:P40818 GermOnline:ENSG00000138592
            InterPro:IPR015063 Pfam:PF08969 Uniprot:P40818
        Length = 1118

 Score = 272 (100.8 bits), Expect = 2.1e-20, P = 2.1e-20
 Identities = 67/204 (32%), Positives = 106/204 (51%)

Query:    71 KGKIAEETTLIGLTFGGYLRSKIKCLKCLGKSELYERMMDLTVEIDGDIG-TLEEALAQF 129
             K K   E+ ++ L F G  +S ++CL C  KS  +E  M L++ +      TL++ L  F
Sbjct:   913 KHKQLNESIIVAL-FQGQFKSTVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLF 971

Query:   130 TASEILVGENKYYCSRCKSYEKAKKKLTVLEEPNILTIVLKRFE-SGNFG-KLNKSVWFP 187
             +  E L   N++YCS C++   + KK+ + + P +L + LKRF   G +  KL  SV FP
Sbjct:   972 SKEEKLTDNNRFYCSHCRARRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFP 1031

Query:   188 -EVLNMAPYMSRTGDGSPMYSLYAVVVHLDVTNATFSGHYVCYVKNS-HEEWFRIDDSTV 245
              E L+++ Y+    +    Y+L++V  H    +    GHY  Y KN+  + WF+ DD  V
Sbjct:  1032 LENLDLSQYVIGPKNNLKKYNLFSVSNHYGGLDG---GHYTAYCKNAARQRWFKFDDHEV 1088

Query:   246 IPVKLERVLSEEAYMLLYARHSPR 269
               + +  V S  AY+L Y    PR
Sbjct:  1089 SDISVSSVKSSAAYILFYTSLGPR 1112


>TAIR|locus:2140074 [details] [associations]
            symbol:UBP3 "ubiquitin-specific protease 3" species:3702
            "Arabidopsis thaliana" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0004843 "ubiquitin-specific protease
            activity" evidence=ISS;IDA] [GO:0005737 "cytoplasm" evidence=ISM]
            [GO:0006511 "ubiquitin-dependent protein catabolic process"
            evidence=IEA] [GO:0006007 "glucose catabolic process" evidence=RCA]
            [GO:0006499 "N-terminal protein myristoylation" evidence=RCA]
            [GO:0007165 "signal transduction" evidence=RCA] [GO:0009755
            "hormone-mediated signaling pathway" evidence=RCA] [GO:0005634
            "nucleus" evidence=IDA] InterPro:IPR001394 InterPro:IPR018200
            Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235
            GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0008234
            GO:GO:0006511 EMBL:AL161596 EMBL:AL035708 GO:GO:0004221
            eggNOG:COG5533 KO:K11842 HOGENOM:HOG000231498 EMBL:U76845
            EMBL:AY058889 EMBL:AY079044 IPI:IPI00529126 PIR:T06097
            RefSeq:NP_568074.1 UniGene:At.24733 ProteinModelPortal:O24454
            SMR:O24454 STRING:O24454 MEROPS:C19.008 PaxDb:O24454 PRIDE:O24454
            EnsemblPlants:AT4G39910.1 GeneID:830150 KEGG:ath:AT4G39910
            GeneFarm:4911 TAIR:At4g39910 InParanoid:O24454 OMA:TEPTWVH
            PhylomeDB:O24454 ProtClustDB:CLSN2688340 Genevestigator:O24454
            GermOnline:AT4G39910 Uniprot:O24454
        Length = 371

 Score = 246 (91.7 bits), Expect = 2.3e-20, Sum P(2) = 2.3e-20
 Identities = 64/187 (34%), Positives = 103/187 (55%)

Query:    65 LKEFGAKGKIAEE--TTLIGLTFGGYLRSKIKCLKCLGKSELYERMMDLTVEIDGDIGTL 122
             LK   A G + +E   T +   F G L ++ +CL+C   +   E  +DL+++I+ +  ++
Sbjct:   154 LKVPQANGVVHKEPIVTWVHNIFQGILTNETRCLRCETVTARDETFLDLSLDIEQN-SSI 212

Query:   123 EEALAQFTASEILVGENKYYCSRCKSYEKAKKKLTVLEEPNILTIVLKRF----ESGNFG 178
                L  F+++E L  E+K++C +C S ++A+K++ + + P+IL I LKRF    + G + 
Sbjct:   213 TSCLKNFSSTETLHAEDKFFCDKCCSLQEAQKRMKIKKPPHILVIHLKRFKYIEQLGRYK 272

Query:   179 KLNKSVWFPEVLNMAPYMSRTGDGSPMYSLYAVVVHLDVTNATFSGHYVCYVKNSHEEWF 238
             KL+  V FP  L ++  +    D    YSL+AVVVH  V +    GHYV  VK SH  W 
Sbjct:   273 KLSYRVVFPLELKLSNTVEPYADVE--YSLFAVVVH--VGSGPNHGHYVSLVK-SHNHWL 327

Query:   239 RIDDSTV 245
               DD  V
Sbjct:   328 FFDDENV 334

 Score = 49 (22.3 bits), Expect = 2.3e-20, Sum P(2) = 2.3e-20
 Identities = 14/55 (25%), Positives = 26/55 (47%)

Query:    25 VSPIGILSKIQKIGSHLGHGREEDAHEFLRCAVDTMQSVCLKEFGAKGKIAEETT 79
             ++P   + +++K          +DAHEFL   ++ +  +  KE  A  K   ET+
Sbjct:    89 IAPKRFVQRLKKQNELFRSYMHQDAHEFLNYLLNEVVDILEKEAKAT-KTEHETS 142


>UNIPROTKB|Q86UV5 [details] [associations]
            symbol:USP48 "Ubiquitin carboxyl-terminal hydrolase 48"
            species:9606 "Homo sapiens" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0008234 "cysteine-type
            peptidase activity" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
            "cytoplasm" evidence=IDA] [GO:0005739 "mitochondrion" evidence=IDA]
            InterPro:IPR001394 InterPro:IPR006615 InterPro:IPR018200
            Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235
            PROSITE:PS51283 Prosite:PS00299 GO:GO:0005739 GO:GO:0005634
            GO:GO:0008234 GO:GO:0006511 InterPro:IPR019955 PROSITE:PS50053
            GO:GO:0004221 eggNOG:COG5077 EMBL:AL590103 HSSP:P54578
            EMBL:AL359815 MEROPS:C19.068 KO:K11858 CleanEx:HS_USP31 CTD:84196
            HOVERGEN:HBG080368 OrthoDB:EOG4GF3DC EMBL:AF502942 EMBL:AK000110
            EMBL:AK002190 EMBL:AK026707 EMBL:AK026930 EMBL:BC007326
            EMBL:BC013567 EMBL:BC067261 EMBL:BC103724 EMBL:BC104896
            EMBL:AL834375 IPI:IPI00328815 IPI:IPI00414817 IPI:IPI00748485
            IPI:IPI00786950 IPI:IPI00787034 IPI:IPI00787461 IPI:IPI00788045
            RefSeq:NP_001027902.1 RefSeq:NP_115612.4 UniGene:Hs.467524
            ProteinModelPortal:Q86UV5 SMR:Q86UV5 IntAct:Q86UV5 STRING:Q86UV5
            PhosphoSite:Q86UV5 DMDM:74750436 PaxDb:Q86UV5 PRIDE:Q86UV5
            Ensembl:ENST00000308271 Ensembl:ENST00000374732
            Ensembl:ENST00000400301 Ensembl:ENST00000421625 GeneID:84196
            KEGG:hsa:84196 UCSC:uc001bfa.3 UCSC:uc001bfb.3 UCSC:uc001bfc.3
            UCSC:uc001bfd.1 UCSC:uc001bff.3 GeneCards:GC01M022004
            HGNC:HGNC:18533 HPA:HPA030045 HPA:HPA030046 neXtProt:NX_Q86UV5
            PharmGKB:PA134947522 InParanoid:Q86UV5 PhylomeDB:Q86UV5
            ChiTaRS:USP48 GenomeRNAi:84196 NextBio:73598 ArrayExpress:Q86UV5
            Bgee:Q86UV5 CleanEx:HS_USP48 Genevestigator:Q86UV5
            GermOnline:ENSG00000090686 Uniprot:Q86UV5
        Length = 1035

 Score = 271 (100.5 bits), Expect = 2.5e-20, P = 2.5e-20
 Identities = 66/226 (29%), Positives = 119/226 (52%)

Query:    25 VSPIGILSKIQKIGSHLGHGREEDAHEFLRCAVDTMQSVCLKEFGAKGKIAEETTLIGLT 84
             + P G    ++ +G  L  G+++DA EF +  +  ++    K+     K  +   ++   
Sbjct:   163 IDPSGF---VKALG--LDTGQQQDAQEFSKLFMSLLEDTLSKQ-----KNPDVRNIVQQQ 212

Query:    85 FGGYLRSKIKCLKCLGKSELYERMMDLTVEIDGDIGTLEEALAQFTASEILVGENKYYCS 144
             F G       C +C  +S+L  +  +L + I G    L + +++F   E L G+N+Y+C 
Sbjct:   213 FCGEYAYVTVCNQCGRESKLLSKFYELELNIQGH-KQLTDCISEFLKEEKLEGDNRYFCE 271

Query:   145 RCKSYEKAKKKLTVLEEPNILTIVLKRF----ESGNFGKLNKSVWFPEVLNMAPYMSRTG 200
              C+S + A +K+ +L  P  L + L RF    ++G+  KLN  + F E+L+M PY+   G
Sbjct:   272 NCQSKQNATRKIRLLSLPCTLNLQLMRFVFDRQTGHKKKLNTYIGFSEILDMEPYVEHKG 331

Query:   201 DGSPMYSLYAVVVHLDVTNATFSGHYVCYVKNSHE-EWFRIDDSTV 245
              GS +Y L AV++H  V+   +SGHY+ +VK+    EW++ +D  +
Sbjct:   332 -GSYVYELSAVLIHRGVS--AYSGHYIAHVKDPQSGEWYKFNDEDI 374


>UNIPROTKB|F1PG27 [details] [associations]
            symbol:USP48 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005739 "mitochondrion" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA]
            [GO:0004221 "ubiquitin thiolesterase activity" evidence=IEA]
            InterPro:IPR001394 InterPro:IPR006615 InterPro:IPR018200
            Pfam:PF00443 PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS51283
            GO:GO:0005739 GO:GO:0005634 GO:GO:0006511 InterPro:IPR019955
            PROSITE:PS50053 GO:GO:0004221 GeneTree:ENSGT00630000089581
            KO:K11858 CTD:84196 OMA:LSNWPED EMBL:AAEX03001778
            RefSeq:XP_535372.2 Ensembl:ENSCAFT00000023542 GeneID:478198
            KEGG:cfa:478198 Uniprot:F1PG27
        Length = 1036

 Score = 271 (100.5 bits), Expect = 2.5e-20, P = 2.5e-20
 Identities = 66/226 (29%), Positives = 119/226 (52%)

Query:    25 VSPIGILSKIQKIGSHLGHGREEDAHEFLRCAVDTMQSVCLKEFGAKGKIAEETTLIGLT 84
             + P G    ++ +G  L  G+++DA EF +  +  ++    K+     K  +   ++   
Sbjct:   163 IDPSGF---VKALG--LDTGQQQDAQEFSKLFMSLLEDTLSKQ-----KNPDVRNIVQQQ 212

Query:    85 FGGYLRSKIKCLKCLGKSELYERMMDLTVEIDGDIGTLEEALAQFTASEILVGENKYYCS 144
             F G       C +C  +S+L  +  +L + I G    L + +++F   E L G+N+Y+C 
Sbjct:   213 FCGEYAYVTVCNQCGRESKLLSKFYELELNIQGH-KQLTDCISEFLKEEKLEGDNRYFCE 271

Query:   145 RCKSYEKAKKKLTVLEEPNILTIVLKRF----ESGNFGKLNKSVWFPEVLNMAPYMSRTG 200
              C+S + A +K+ +L  P  L + L RF    ++G+  KLN  + F E+L+M PY+   G
Sbjct:   272 NCQSKQNATRKIRLLSLPCTLNLQLMRFVFDRQTGHKKKLNTYIGFSEILDMEPYVEHKG 331

Query:   201 DGSPMYSLYAVVVHLDVTNATFSGHYVCYVKNSHE-EWFRIDDSTV 245
              GS +Y L AV++H  V+   +SGHY+ +VK+    EW++ +D  +
Sbjct:   332 -GSYVYELSAVLIHRGVS--AYSGHYIAHVKDPQSGEWYKFNDEDI 374


>UNIPROTKB|B7ZKS7 [details] [associations]
            symbol:USP48 "Ubiquitin carboxyl-terminal hydrolase 48"
            species:9606 "Homo sapiens" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
            "cytoplasm" evidence=IDA] [GO:0005739 "mitochondrion" evidence=IDA]
            InterPro:IPR001394 InterPro:IPR006615 InterPro:IPR018200
            Pfam:PF00443 PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS51283
            GO:GO:0005739 GO:GO:0005634 GO:GO:0006511 InterPro:IPR019955
            PROSITE:PS50053 GO:GO:0004221 EMBL:AL590103 EMBL:AL359815
            HOGENOM:HOG000231639 HOVERGEN:HBG080368 UniGene:Hs.467524
            HGNC:HGNC:18533 ChiTaRS:USP48 OMA:LSNWPED EMBL:BC143354
            IPI:IPI00977309 SMR:B7ZKS7 STRING:B7ZKS7 Ensembl:ENST00000529637
            UCSC:uc001bfe.1 Uniprot:B7ZKS7
        Length = 1047

 Score = 271 (100.5 bits), Expect = 2.5e-20, P = 2.5e-20
 Identities = 66/226 (29%), Positives = 119/226 (52%)

Query:    25 VSPIGILSKIQKIGSHLGHGREEDAHEFLRCAVDTMQSVCLKEFGAKGKIAEETTLIGLT 84
             + P G    ++ +G  L  G+++DA EF +  +  ++    K+     K  +   ++   
Sbjct:   163 IDPSGF---VKALG--LDTGQQQDAQEFSKLFMSLLEDTLSKQ-----KNPDVRNIVQQQ 212

Query:    85 FGGYLRSKIKCLKCLGKSELYERMMDLTVEIDGDIGTLEEALAQFTASEILVGENKYYCS 144
             F G       C +C  +S+L  +  +L + I G    L + +++F   E L G+N+Y+C 
Sbjct:   213 FCGEYAYVTVCNQCGRESKLLSKFYELELNIQGH-KQLTDCISEFLKEEKLEGDNRYFCE 271

Query:   145 RCKSYEKAKKKLTVLEEPNILTIVLKRF----ESGNFGKLNKSVWFPEVLNMAPYMSRTG 200
              C+S + A +K+ +L  P  L + L RF    ++G+  KLN  + F E+L+M PY+   G
Sbjct:   272 NCQSKQNATRKIRLLSLPCTLNLQLMRFVFDRQTGHKKKLNTYIGFSEILDMEPYVEHKG 331

Query:   201 DGSPMYSLYAVVVHLDVTNATFSGHYVCYVKNSHE-EWFRIDDSTV 245
              GS +Y L AV++H  V+   +SGHY+ +VK+    EW++ +D  +
Sbjct:   332 -GSYVYELSAVLIHRGVS--AYSGHYIAHVKDPQSGEWYKFNDEDI 374


>UNIPROTKB|F1NVC5 [details] [associations]
            symbol:USP12P1 "Ubiquitin carboxyl-terminal hydrolase"
            species:9031 "Gallus gallus" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0008234 "cysteine-type
            peptidase activity" evidence=IEA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 GO:GO:0008234 GO:GO:0006511 GO:GO:0004221
            GeneTree:ENSGT00650000093027 EMBL:AADN02013537 IPI:IPI00590579
            Ensembl:ENSGALT00000022631 OMA:NCEAVSS ArrayExpress:F1NVC5
            Uniprot:F1NVC5
        Length = 375

 Score = 257 (95.5 bits), Expect = 3.6e-20, P = 3.6e-20
 Identities = 81/258 (31%), Positives = 131/258 (50%)

Query:    25 VSPIGILSKIQKIGSHLGHGREEDAHEFLRCAVDTMQSVCLKEFGAK---GKI------A 75
             + P   +S+++K      +  ++DAHEFL   ++T+  +  +E   +   GK+      +
Sbjct:   107 IPPKKFISRLRKENELFDNYMQQDAHEFLNYLLNTIADLLQEEKKQEKQNGKLQNGSIES 166

Query:    76 EETTLIGLT-----FGGYLRSKIKCLKCLGKSELYERMMDLTVEIDGDIGTLEEALAQFT 130
             EE     LT     F G L ++ +CL C   S   E  +DL+V+++ +  ++   L  F+
Sbjct:   167 EEGDKTDLTWVHEIFQGTLTNETRCLNCEAVSSKDEDFLDLSVDVEQNT-SITHCLRGFS 225

Query:   131 ASEILVGENKYYCSRCKSYEKAKKKLTVLEEPNILTIVLKRF----ESGNFGKLNKSVWF 186
              +E L  E KYYC +C+S ++A+K++ V + P IL + LKRF    +   + KL+  V F
Sbjct:   226 NTETLCSEYKYYCEQCRSKQEAQKRMRVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVF 285

Query:   187 PEVLNMAPYMSRTGDGS-P--MYSLYAVVVHLDVTNATFSGHYVCYVKNSHEEWFRIDDS 243
             P  L +    + +GD + P  MY L AVVVH    +    GHY+  VK SH  W   DD 
Sbjct:   286 PLELRL---FNTSGDATNPDRMYDLVAVVVHCG--SGPNRGHYITIVK-SHGFWLLFDDD 339

Query:   244 TVIPVKLERVLSEEAYML 261
              V  +  + +  EE Y L
Sbjct:   340 IVEKIDAQAI--EEFYGL 355


>RGD|1564628 [details] [associations]
            symbol:Usp27x "ubiquitin specific peptidase 27, X-linked"
            species:10116 "Rattus norvegicus" [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA]
            [GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
            InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 RGD:1564628 GO:GO:0008234
            GO:GO:0006511 GO:GO:0004221 GeneTree:ENSGT00690000101718
            OrthoDB:EOG4VT5X3 IPI:IPI00362588 Ensembl:ENSRNOT00000003800
            Uniprot:D3ZGB0
        Length = 438

 Score = 203 (76.5 bits), Expect = 4.0e-20, Sum P(2) = 4.0e-20
 Identities = 49/162 (30%), Positives = 80/162 (49%)

Query:   119 IGTLEEALAQFTASEILVGENKYYCSRCKSYEKAKKKLTVLEEPNILTIVLKRFESG--N 176
             + TL + L +FT  E L    K  C  C+SY+++ K+LT+ + P +     KRFE     
Sbjct:   260 VTTLTDCLRRFTRPEHLGSSAKIKCGSCQSYQESTKQLTMKKLPVVACFHFKRFEHSAKQ 319

Query:   177 FGKLNKSVWFPEVLNMAPYMS---------------RTGDGSPMYSLYAVVVHLDVTNAT 221
               K+   + FP  L+M P+M+                +G+    YSL+AVV H       
Sbjct:   320 RRKITTYISFPLELDMTPFMASSKETRMNGQLQLPTNSGNNENKYSLFAVVNHQGTLE-- 377

Query:   222 FSGHYVCYVKNSHEEWFRIDDSTVIPVKLERVLSEEAYMLLY 263
              SGHY  ++++  ++WF+ DD+ +    ++ VL  E Y+L Y
Sbjct:   378 -SGHYTSFIRHHRDQWFKCDDAVITKASIKDVLDSEGYLLFY 418

 Score = 105 (42.0 bits), Expect = 4.0e-20, Sum P(2) = 4.0e-20
 Identities = 29/98 (29%), Positives = 46/98 (46%)

Query:    24 PVSPIGILSKIQKIGSHLGHGREEDAHEFLRCAVDTMQSVCLKEFGAKGKIAEETT---- 79
             P  P  +L  +     HL   R++DAHEFL  A+D +   C  +    GK+A        
Sbjct:   140 PHVPYKLLHLVWIHARHLAGYRQQDAHEFLIAALDVLHRHCKGD--DVGKVASNPNHCNC 197

Query:    80 LIGLTFGGYLRSKIKCLKCLGKSELYERMMDLTVEIDG 117
             +I   F G L+S + C  C G S   +   D+++++ G
Sbjct:   198 IIDQIFTGGLQSDVTCQACHGVSTTIDPCWDISLDLPG 235


>ZFIN|ZDB-GENE-060512-211 [details] [associations]
            symbol:usp22 "ubiquitin specific peptidase 22"
            species:7955 "Danio rerio" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0008270 "zinc ion binding"
            evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=IEA] [GO:0008233 "peptidase activity" evidence=IEA]
            [GO:0016568 "chromatin modification" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
            [GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
            [GO:0016787 "hydrolase activity" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0007049 "cell
            cycle" evidence=IEA] InterPro:IPR001394 InterPro:IPR001607
            InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271
            ZFIN:ZDB-GENE-060512-211 GO:GO:0005634 GO:GO:0006355 GO:GO:0046872
            GO:GO:0008270 GO:GO:0008234 GO:GO:0006351 GO:GO:0016568
            GO:GO:0007049 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511
            GO:GO:0004221 eggNOG:COG5533 KO:K11366 HOGENOM:HOG000007260
            CTD:23326 HOVERGEN:HBG058014 OrthoDB:EOG48PMJS EMBL:BC116508
            EMBL:BC146618 IPI:IPI00855315 IPI:IPI00923761 RefSeq:NP_001038713.1
            UniGene:Dr.87145 ProteinModelPortal:A6H8I0 STRING:A6H8I0
            MEROPS:C19.035 PRIDE:A6H8I0 GeneID:692275 KEGG:dre:692275
            NextBio:20902479 Bgee:A6H8I0 Uniprot:A6H8I0
        Length = 506

 Score = 201 (75.8 bits), Expect = 4.1e-20, Sum P(2) = 4.1e-20
 Identities = 53/160 (33%), Positives = 80/160 (50%)

Query:   121 TLEEALAQFTASEILVGENKYYCSRCKSYEKAKKKLTVLEEPNILTIVLKRFE-SGNFG- 178
             TL + L +FT  E L    K  CS C SY+++ K+LT+   P +    LKRFE S     
Sbjct:   342 TLTDCLRRFTRPEHLGSSAKIKCSGCHSYQESTKQLTMKRLPIVACFHLKRFEHSAKLRR 401

Query:   179 KLNKSVWFPEVLNMAPYMSRTGDG-------SPM--------YSLYAVVVHLDVTNATFS 223
             K+   V FP  L+M P+M+ + +         P+        YSL+AVV H        S
Sbjct:   402 KITTYVSFPLELDMTPFMASSKESRMNGQYQQPVDSLNNDNKYSLFAVVNHQGTLE---S 458

Query:   224 GHYVCYVKNSHEEWFRIDDSTVIPVKLERVLSEEAYMLLY 263
             GHY  +++   ++WF+ DD+ +    ++ VL  E Y+L Y
Sbjct:   459 GHYTTFIRQHKDQWFKCDDAIITKASIKDVLDSEGYLLFY 498

 Score = 110 (43.8 bits), Expect = 4.1e-20, Sum P(2) = 4.1e-20
 Identities = 27/95 (28%), Positives = 43/95 (45%)

Query:    24 PVSPIGILSKIQKIGSHLGHGREEDAHEFLRCAVDTMQSVCLKEFGAKGKIAEETT-LIG 82
             P  P  +L  +     HL    ++DAHEFL  A+D +   C  + G K         +I 
Sbjct:   220 PHIPFRLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCKDDNGKKANNPNHCNCIID 279

Query:    83 LTFGGYLRSKIKCLKCLGKSELYERMMDLTVEIDG 117
               F G L+S + C  C G S   +   D+++++ G
Sbjct:   280 QIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPG 314


>UNIPROTKB|F1LTX2 [details] [associations]
            symbol:F1LTX2 "Uncharacterized protein" species:10116
            "Rattus norvegicus" [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
            process" evidence=IEA] InterPro:IPR001394 InterPro:IPR018200
            Pfam:PF00443 PROSITE:PS00973 PROSITE:PS50235 GO:GO:0006511
            GO:GO:0004221 IPI:IPI00557075 Ensembl:ENSRNOT00000043867
            OMA:VWIHACH Uniprot:F1LTX2
        Length = 283

 Score = 186 (70.5 bits), Expect = 6.7e-20, Sum P(2) = 6.7e-20
 Identities = 46/156 (29%), Positives = 78/156 (50%)

Query:   119 IGTLEEALAQFTASEILVGENKYYCSRCKSYEKAKKKLTVLEEPNILTIVLKRFES-GNF 177
             + TL + L +FT  E L    K  C  C+SY+++ K+ T+ + P I+  V     +    
Sbjct:   129 VTTLTDCLRRFTRPEHLGSSAKIKCGSCQSYQESTKQFTMKKLPIIVCFVSNDLNTVKQR 188

Query:   178 GKLNKSVWFPEVLNMAPYMS---------RTGDGSP-MYSLYAVVVHLDVTNATFSGHYV 227
              K+   + FP  L+M P+M+          TG+ +   YSL+A+V H        SGHY 
Sbjct:   189 RKITTYISFPLELDMTPFMASSKETRLPTNTGNNNENKYSLFALVNHQGTLE---SGHYT 245

Query:   228 CYVKNSHEEWFRIDDSTVIPVKLERVLSEEAYMLLY 263
              ++ +  ++WF+ DD+ +    ++ VL  E Y+L Y
Sbjct:   246 SFIWHHRDQWFKCDDAVITKASIKDVLDSEEYLLFY 281

 Score = 107 (42.7 bits), Expect = 6.7e-20, Sum P(2) = 6.7e-20
 Identities = 30/100 (30%), Positives = 47/100 (47%)

Query:    22 SYPVSPIGILSKIQKIGSHLGHGREEDAHEFLRCAVDTMQSVCLKEFGAKGKIAEETT-- 79
             S P  P  +L  +     HL   R++DAHEFL  A+D +   C  +    GK+A      
Sbjct:     7 SSPHVPYKLLHLVWIHACHLSGYRQQDAHEFLIAALDVLHRHCKGD--NVGKVASNPNHC 64

Query:    80 --LIGLTFGGYLRSKIKCLKCLGKSELYERMMDLTVEIDG 117
               +I   F G L+S + C  C G S   +   D+++++ G
Sbjct:    65 NCIIDQIFTGGLQSDVTCQACHGVSTTIDPCWDISLDLPG 104


>MGI|MGI:1859645 [details] [associations]
            symbol:Usp27x "ubiquitin specific peptidase 27, X
            chromosome" species:10090 "Mus musculus" [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] [GO:0005575
            "cellular_component" evidence=ND] [GO:0006508 "proteolysis"
            evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
            process" evidence=IEA] [GO:0008233 "peptidase activity"
            evidence=IEA] [GO:0008234 "cysteine-type peptidase activity"
            evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
            [GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 MGI:MGI:1859645 GO:GO:0008234 GO:GO:0006511
            GO:GO:0004221 eggNOG:COG5533 HSSP:P54578 KO:K11366
            GeneTree:ENSGT00690000101718 HOVERGEN:HBG058014 CTD:389856
            EMBL:AF229643 EMBL:AK028249 EMBL:AK030383 EMBL:AL663104
            IPI:IPI00224850 RefSeq:NP_062334.2 UniGene:Mm.483107
            UniGene:Mm.488988 ProteinModelPortal:Q8CEG8 SMR:Q8CEG8
            PhosphoSite:Q8CEG8 PRIDE:Q8CEG8 Ensembl:ENSMUST00000115744
            Ensembl:ENSMUST00000178293 GeneID:54651 KEGG:mmu:54651
            InParanoid:Q9JIG5 OrthoDB:EOG4VT5X3 NextBio:311508 Bgee:Q8CEG8
            Genevestigator:Q8CEG8 Uniprot:Q8CEG8
        Length = 438

 Score = 201 (75.8 bits), Expect = 6.9e-20, Sum P(2) = 6.9e-20
 Identities = 51/171 (29%), Positives = 82/171 (47%)

Query:   119 IGTLEEALAQFTASEILVGENKYYCSRCKSYEKAKKKLTVLEEPNILTIVLKRFESG--N 176
             I TL + L +FT  E L    K  C  C+SY+++ K+LT+ + P +     KRFE     
Sbjct:   260 ITTLTDCLRRFTRPEHLGSSAKIKCGSCQSYQESTKQLTMKKLPVVACFHFKRFEHSAKQ 319

Query:   177 FGKLNKSVWFPEVLNMAPYMS---------------RTGDGSPMYSLYAVVVHLDVTNAT 221
               K+   + FP  L+M P+M+                + +    YSL+AVV H       
Sbjct:   320 RRKITTYISFPLELDMTPFMASSKETRVNGQLQLPTNSANNENKYSLFAVVNHQGTLE-- 377

Query:   222 FSGHYVCYVKNSHEEWFRIDDSTVIPVKLERVLSEEAYMLLYARH--SPRP 270
              SGHY  ++++  ++WF+ DD+ +    ++ VL  E Y+L Y +    P P
Sbjct:   378 -SGHYTSFIRHHRDQWFKCDDAVITKASIKDVLDSEGYLLFYHKQVLEPEP 427

 Score = 105 (42.0 bits), Expect = 6.9e-20, Sum P(2) = 6.9e-20
 Identities = 29/98 (29%), Positives = 46/98 (46%)

Query:    24 PVSPIGILSKIQKIGSHLGHGREEDAHEFLRCAVDTMQSVCLKEFGAKGKIAEETT---- 79
             P  P  +L  +     HL   R++DAHEFL  A+D +   C  +    GK+A        
Sbjct:   140 PHVPYKLLHLVWIHARHLAGYRQQDAHEFLIAALDVLHRHCKGD--DVGKVASNPNHCNC 197

Query:    80 LIGLTFGGYLRSKIKCLKCLGKSELYERMMDLTVEIDG 117
             +I   F G L+S + C  C G S   +   D+++++ G
Sbjct:   198 IIDQIFTGGLQSDVTCQACHGVSTTIDPCWDISLDLPG 235


>WB|WBGene00013506 [details] [associations]
            symbol:usp-3 species:6239 "Caenorhabditis elegans"
            [GO:0004221 "ubiquitin thiolesterase activity" evidence=IEA]
            [GO:0006511 "ubiquitin-dependent protein catabolic process"
            evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
            InterPro:IPR001394 InterPro:IPR001607 InterPro:IPR018200
            Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 PROSITE:PS50271 GO:GO:0046872 GO:GO:0008270
            GO:GO:0008234 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511
            GO:GO:0004221 EMBL:AL132902 GeneTree:ENSGT00690000102047
            MEROPS:C19.026 RefSeq:NP_493434.3 ProteinModelPortal:Q9GRV2
            SMR:Q9GRV2 PaxDb:Q9GRV2 EnsemblMetazoa:Y71A12B.9 GeneID:190579
            KEGG:cel:CELE_Y71A12B.9 UCSC:Y71A12B.9 CTD:190579
            WormBase:Y71A12B.9 HOGENOM:HOG000020065 NextBio:946258
            Uniprot:Q9GRV2
        Length = 550

 Score = 262 (97.3 bits), Expect = 7.3e-20, P = 7.3e-20
 Identities = 67/227 (29%), Positives = 117/227 (51%)

Query:    45 REEDAHEFLRCAVDTMQSVCLKEFGAKGKIAEETTLIGLTFGGYLRSKIKCLKCLGKSEL 104
             R+ D+HEF+R  +D++ +   K     G   ++ T I   F G L+S + C  C   S  
Sbjct:   322 RQHDSHEFMRYFMDSLHTEMRKCRKLPGMPDDKHTPISKYFEGTLQSSVICQTCRNCSNK 381

Query:   105 YERMMDLTVEIDGDIGT----LEEALAQFTASEILVGENKYYCSRCKSYEKAKKKLTVLE 160
              +  MDL+++I          L + L+ F   E+L    K  C++CK+ +   K++ + +
Sbjct:   382 IDEFMDLSLDIPAQRNASKVRLSDCLSTFFKLEMLEKGEKPECAKCKTKQTCSKQMFIRK 441

Query:   161 EPNILTIVLKRFESGNFGKLNKSVWFPE-VLNMAPYMSRTGDGSPM-YSLYAVVVHLDVT 218
              P +L + +KRF   N GK +  + FP   L++  +++   D +P  YSL +++VH+   
Sbjct:   442 LPQVLCLHMKRFRD-NGGKNDAIIDFPMGQLDVTQFLTDDSDEAPCTYSLQSIIVHIGY- 499

Query:   219 NATFSGHYVCYVKNSHEEWFRIDDSTVIPVKLERVLSEEAYMLLYAR 265
                 SGHY+ + K +   WF+ DD+ V  V    V  ++AY+LLY +
Sbjct:   500 -GCGSGHYIAFGKRNGR-WFQFDDTVVKGVDEAHVSKQKAYVLLYTK 544


>UNIPROTKB|I3LLE9 [details] [associations]
            symbol:USP46 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0032228 "regulation of synaptic transmission,
            GABAergic" evidence=IEA] [GO:0016579 "protein deubiquitination"
            evidence=IEA] [GO:0007610 "behavior" evidence=IEA] [GO:0004843
            "ubiquitin-specific protease activity" evidence=IEA] [GO:0004221
            "ubiquitin thiolesterase activity" evidence=IEA] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA]
            InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 GO:GO:0007610 GO:GO:0032228
            GO:GO:0006511 GO:GO:0004843 GO:GO:0016579 GO:GO:0004221
            GeneTree:ENSGT00650000093027 OMA:TEPTWVH EMBL:CU469206
            EMBL:FP325228 ProteinModelPortal:I3LLE9 Ensembl:ENSSSCT00000030149
            Uniprot:I3LLE9
        Length = 354

 Score = 251 (93.4 bits), Expect = 8.3e-20, P = 8.3e-20
 Identities = 79/256 (30%), Positives = 125/256 (48%)

Query:    25 VSPIGILSKIQKIGSHLGHGREEDAHEFLRCAVDTMQSVCLKEFGAK---GKI------- 74
             + P   +S+++K      +  ++DAHEFL   ++T+  +  +E   +   GK+       
Sbjct:    85 IPPKKFISRLRKENDLFDNYMQQDAHEFLNYLLNTIADILQEEKKQEKQNGKLKNGNMNE 144

Query:    75 -AE----ETTLIGLTFGGYLRSKIKCLKCLGKSELYERMMDLTVEIDGDIGTLEEALAQF 129
              AE    E T +   F G L ++ +CL C   S   E  +DL+V+++ +  ++   L  F
Sbjct:   145 PAENNKPELTWVHEIFQGTLTNETRCLNCETVSSKDEDFLDLSVDVEQNT-SITHCLRDF 203

Query:   130 TASEILVGENKYYCSRCKSYEKAKKKLTVLEEPNILTIVLKRF----ESGNFGKLNKSVW 185
             + +E L  E KYYC  C S ++A+K++ V + P IL + LKRF    +   + KL+  V 
Sbjct:   204 SNTETLCSEQKYYCETCCSKQEAQKRMRVKKLPMILALHLKRFKYMEQLHRYTKLSYRVV 263

Query:   186 FPEVLNMAPYMSRTGDGSPMYSLYAVVVHLDVTNATFSGHYVCYVKNSHEEWFRIDDSTV 245
             FP  L +    S   +   MY L AVVVH    +    GHY+  VK SH  W   DD  V
Sbjct:   264 FPLELRLFNTSSDAVNLDRMYDLVAVVVHCG--SGPNRGHYITIVK-SHGFWLLFDDDIV 320

Query:   246 IPVKLERVLSEEAYML 261
               +  + +  EE Y L
Sbjct:   321 EKIDAQAI--EEFYGL 334


>UNIPROTKB|F1MTL6 [details] [associations]
            symbol:USP27X "Ubiquitin carboxyl-terminal hydrolase"
            species:9913 "Bos taurus" [GO:0008234 "cysteine-type peptidase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 GO:GO:0008234 GO:GO:0006511 GO:GO:0004221 KO:K11366
            GeneTree:ENSGT00690000101718 CTD:389856 EMBL:DAAA02073086
            IPI:IPI00921773 RefSeq:NP_001138547.1 UniGene:Bt.88841
            Ensembl:ENSBTAT00000056161 GeneID:781718 KEGG:bta:781718
            OMA:YQCFVWC NextBio:20924995 Uniprot:F1MTL6
        Length = 438

 Score = 202 (76.2 bits), Expect = 8.6e-20, Sum P(2) = 8.6e-20
 Identities = 52/162 (32%), Positives = 81/162 (50%)

Query:   119 IGTLEEALAQFTASEILVGENKYYCSRCKSYEKAKKKLTVLEEPNILTIVLKRFESG--N 176
             I TL + L +FT  E L    K  C  C+SY+++ K+LT+ + P +     KRFE     
Sbjct:   260 ITTLTDCLRRFTRPEHLGSSAKIKCGSCQSYQESTKQLTMNKLPVVACFHFKRFEHSAKQ 319

Query:   177 FGKLNKSVWFPEVLNMAPYM-----SR----------TGDGSPMYSLYAVVVHLDVTNAT 221
               K+   + FP  L+M P+M     SR          +G+    YSL+AVV H       
Sbjct:   320 RRKITTYISFPLELDMTPFMASSKESRMNGQLQLPTNSGNDENKYSLFAVVNHQGTLE-- 377

Query:   222 FSGHYVCYVKNSHEEWFRIDDSTVIPVKLERVLSEEAYMLLY 263
              SGHY  ++++  ++WF+ DD+ +    ++ VL  E Y+L Y
Sbjct:   378 -SGHYTSFIRHHKDQWFKCDDAVITKASIKDVLDSEGYLLFY 418

 Score = 103 (41.3 bits), Expect = 8.6e-20, Sum P(2) = 8.6e-20
 Identities = 31/98 (31%), Positives = 46/98 (46%)

Query:    24 PVSPIGILSKIQKIGSHLGHGREEDAHEFLRCAVDTMQSVCLKEFGAKGKIAEETT---- 79
             P  P  +L  +     HL   R++DAHEFL  A+D +   C K   A GK A        
Sbjct:   140 PHVPYKLLHLVWIHARHLAGYRQQDAHEFLIAALDVLHRHC-KGDDA-GKAASNPNHCNC 197

Query:    80 LIGLTFGGYLRSKIKCLKCLGKSELYERMMDLTVEIDG 117
             +I   F G L+S + C  C G S   +   D+++++ G
Sbjct:   198 IIDQIFTGGLQSDVTCQACHGVSTTIDPCWDISLDLPG 235


>UNIPROTKB|B4HUI5 [details] [associations]
            symbol:Usp36 "Ubiquitin carboxyl-terminal hydrolase 36"
            species:7238 "Drosophila sechellia" [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=ISS] [GO:0005730 "nucleolus"
            evidence=ISS] [GO:0016579 "protein deubiquitination" evidence=ISS]
            [GO:0030718 "germ-line stem cell maintenance" evidence=ISS]
            [GO:0035019 "somatic stem cell maintenance" evidence=ISS]
            InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 GO:GO:0005730 GO:GO:0008234
            GO:GO:0006511 GO:GO:0035019 GO:GO:0030718 GO:GO:0016579
            GO:GO:0004221 EMBL:CH480817 KO:K11855 OrthoDB:EOG4WM38P
            RefSeq:XP_002035470.1 EnsemblMetazoa:FBtr0197704 GeneID:6610913
            KEGG:dse:Dsec_GM14719 FlyBase:FBgn0169640 Uniprot:B4HUI5
        Length = 1059

 Score = 202 (76.2 bits), Expect = 9.4e-20, Sum P(3) = 9.4e-20
 Identities = 54/156 (34%), Positives = 82/156 (52%)

Query:     2 PGLHSTFDVVSCLILNAKDGSYPVSPIGILSKIQKIGSHLGHGREEDAHEFLRCAVDTMQ 61
             PG       ++  +L  +     V P  I SK+++I  H+  GR+EDAHEFLR  V+ M+
Sbjct:   211 PGSGCIICAMAKTLLATQSNQSAVRPFLIYSKLKQICKHMVVGRQEDAHEFLRFLVEAME 270

Query:    62 SVCLKEF-GAK--GKIAEETTLIGLTFGGYLRSKIKCLKCLGKSELYERMMDLTVEIDGD 118
                L  F   K   ++ +ETT +G  FGGYLRS+++CL C   S  ++   DL ++I   
Sbjct:   271 RAYLMRFRNYKELDQLVKETTPLGQIFGGYLRSEVRCLSCNHVSITFQHFQDLLLDIR-K 329

Query:   119 IGTLEEALAQFTASEILVGENKYYCSRCKSYEKAKK 154
               +LE+A     + E L  +  Y C  CK  +K K+
Sbjct:   330 ADSLEDAFEGHFSRERLE-DMGYKCEGCK--KKLKR 362

 Score = 116 (45.9 bits), Expect = 9.4e-20, Sum P(3) = 9.4e-20
 Identities = 34/117 (29%), Positives = 55/117 (47%)

Query:   169 LKRFES-GNFGKLNKSVWFPEVLNMAPYMSRT--GDGSPM-YSLYAVVVHLDVTNATFSG 224
             LKRF   GN  KL K + F   ++++ Y +R+      P+ Y L ++V HL  +     G
Sbjct:   360 LKRFSMIGN--KLTKQISFKPRIDLSKYAARSPAAQAQPLTYRLVSMVTHLGASQ--HCG 415

Query:   225 HYVCYVKNSHEEWFRIDDSTVIPVKLERVLSEEAYMLLYA---RHSPRPPALIRNNV 278
             HY          ++  DDS V P+ ++ V +  AY++ +      +  PPA   N V
Sbjct:   416 HYTAIGSTDTGSFYNFDDSYVRPITMQNVCNTNAYIMFFELDLSQAASPPANRPNGV 472

 Score = 42 (19.8 bits), Expect = 9.4e-20, Sum P(3) = 9.4e-20
 Identities = 13/62 (20%), Positives = 31/62 (50%)

Query:   267 SPRPPALIRNNVSHGVKSKKKNLEAVDLNNTSKIRSNS--YIPSLDSKAQQKPCTDSNQL 324
             +P  PA+I++       ++K  ++A+D ++ + +   +   IP+  +K  + P + S   
Sbjct:   756 TPPSPAVIKSKTGIWKVTRKDEVDAIDDDDDAVVVEGAPVKIPT-PNKTHRNPFSSSKPS 814

Query:   325 FD 326
              D
Sbjct:   815 TD 816


>UNIPROTKB|H0YLB7 [details] [associations]
            symbol:USP3 "Ubiquitin carboxyl-terminal hydrolase"
            species:9606 "Homo sapiens" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0008234 "cysteine-type
            peptidase activity" evidence=IEA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 GO:GO:0008234 GO:GO:0006511 GO:GO:0004221
            EMBL:AC118274 EMBL:AC007950 HGNC:HGNC:12626 ChiTaRS:USP3
            ProteinModelPortal:H0YLB7 SMR:H0YLB7 Ensembl:ENST00000559711
            Bgee:H0YLB7 Uniprot:H0YLB7
        Length = 431

 Score = 246 (91.7 bits), Expect = 9.5e-20, Sum P(2) = 9.5e-20
 Identities = 68/212 (32%), Positives = 107/212 (50%)

Query:    78 TTLIGLTFGGYLRSKIKCLKCLGKSELYERMMDLTVEI-------------DGDIGTLEE 124
             +T++   FGG L++++ CL C  +S  ++  +DL+++I             +G + +L +
Sbjct:   218 STVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRSKRSKNQENGPVCSLRD 277

Query:   125 ALAQFTASEILVGENKYYCSRCKSYEKAKKKLTVLEEPNILTIVLKRFESGNF--GKLNK 182
              L  FT  E L     Y C +CK  +K+ KK  + + P +L + LKRF    +   K++ 
Sbjct:   278 CLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDT 337

Query:   183 SVWFP-EVLNMAPYM---SRTGDGSPMYSLYAVVVHLDVTNATFSGHYVCYVKNSHE-EW 237
              V FP   L+M  Y+     +G  S +Y L AVVVH    +   SGHY  Y   +HE  W
Sbjct:   338 YVEFPLRGLDMKCYLLEPENSGPESCLYDLAAVVVHHG--SGVGSGHYTAYA--THEGRW 393

Query:   238 FRIDDSTVIPVKLERVLSEEAYMLLYARHSPR 269
             F  +DSTV     E V+  +AY+L Y  H  +
Sbjct:   394 FHFNDSTVTLTDEETVVKAKAYILFYVEHQAK 425

 Score = 51 (23.0 bits), Expect = 9.5e-20, Sum P(2) = 9.5e-20
 Identities = 11/33 (33%), Positives = 19/33 (57%)

Query:    26 SPIGILSKIQKIGSHLGHGREEDAHEFLRCAVD 58
             SP  +   + KI  +    +++DAHEF+R  +D
Sbjct:   149 SPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLD 181


>UNIPROTKB|A6NNY8 [details] [associations]
            symbol:USP27X "Ubiquitin carboxyl-terminal hydrolase 27"
            species:9606 "Homo sapiens" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0008234 "cysteine-type
            peptidase activity" evidence=IEA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 GO:GO:0008234 GO:GO:0006511 GO:GO:0004221
            EMBL:AF238380 KO:K11366 HOVERGEN:HBG058014 EMBL:DR004246
            IPI:IPI00399220 RefSeq:NP_001138545.1 UniGene:Hs.143587
            ProteinModelPortal:A6NNY8 SMR:A6NNY8 IntAct:A6NNY8
            PhosphoSite:A6NNY8 PRIDE:A6NNY8 GeneID:389856 KEGG:hsa:389856
            UCSC:uc004dop.3 CTD:389856 GeneCards:GC0XP049646 H-InvDB:HIX0077135
            HGNC:HGNC:13486 neXtProt:NX_A6NNY8 PharmGKB:PA134993614
            InParanoid:A6NNY8 GenomeRNAi:389856 NextBio:103162
            CleanEx:HS_USP27X Genevestigator:A6NNY8 Uniprot:A6NNY8
        Length = 438

 Score = 203 (76.5 bits), Expect = 1.0e-19, Sum P(2) = 1.0e-19
 Identities = 52/162 (32%), Positives = 81/162 (50%)

Query:   119 IGTLEEALAQFTASEILVGENKYYCSRCKSYEKAKKKLTVLEEPNILTIVLKRFESG--N 176
             I TL + L +FT  E L    K  C  C+SY+++ K+LT+ + P +     KRFE     
Sbjct:   260 ITTLTDCLRRFTRPEHLGSSAKIKCGSCQSYQESTKQLTMNKLPVVACFHFKRFEHSAKQ 319

Query:   177 FGKLNKSVWFPEVLNMAPYM-----SR----------TGDGSPMYSLYAVVVHLDVTNAT 221
               K+   + FP  L+M P+M     SR          +G+    YSL+AVV H       
Sbjct:   320 RRKITTYISFPLELDMTPFMASSKESRMNGQLQLPTNSGNNENKYSLFAVVNHQGTLE-- 377

Query:   222 FSGHYVCYVKNSHEEWFRIDDSTVIPVKLERVLSEEAYMLLY 263
              SGHY  ++++  ++WF+ DD+ +    ++ VL  E Y+L Y
Sbjct:   378 -SGHYTSFIRHHKDQWFKCDDAVITKASIKDVLDSEGYLLFY 418

 Score = 101 (40.6 bits), Expect = 1.0e-19, Sum P(2) = 1.0e-19
 Identities = 29/98 (29%), Positives = 45/98 (45%)

Query:    24 PVSPIGILSKIQKIGSHLGHGREEDAHEFLRCAVDTMQSVCLKEFGAKGKIAEETT---- 79
             P  P  +L  +     HL   R++DAHEFL  A+D +   C  +    GK A        
Sbjct:   140 PHVPYKLLHLVWIHARHLAGYRQQDAHEFLIAALDVLHRHCKGD--DVGKAANNPNHCNC 197

Query:    80 LIGLTFGGYLRSKIKCLKCLGKSELYERMMDLTVEIDG 117
             +I   F G L+S + C  C G S   +   D+++++ G
Sbjct:   198 IIDQIFTGGLQSDVTCQACHGVSTTIDPCWDISLDLPG 235


>UNIPROTKB|E1C8J6 [details] [associations]
            symbol:USP46 "Ubiquitin carboxyl-terminal hydrolase"
            species:9031 "Gallus gallus" [GO:0006511 "ubiquitin-dependent
            protein catabolic process" evidence=IEA] [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] [GO:0004843
            "ubiquitin-specific protease activity" evidence=IEA] [GO:0007610
            "behavior" evidence=IEA] [GO:0016579 "protein deubiquitination"
            evidence=IEA] [GO:0032228 "regulation of synaptic transmission,
            GABAergic" evidence=IEA] InterPro:IPR001394 InterPro:IPR018200
            Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235
            GO:GO:0007610 GO:GO:0032228 GO:GO:0006511 GO:GO:0004843
            GO:GO:0016579 GO:GO:0004221 EMBL:AADN02031293 KO:K11842
            GeneTree:ENSGT00650000093027 OMA:TEPTWVH CTD:64854
            EMBL:AADN02031294 IPI:IPI00681234 RefSeq:XP_420711.1
            UniGene:Gga.10414 Ensembl:ENSGALT00000032088 GeneID:422758
            KEGG:gga:422758 NextBio:20825346 Uniprot:E1C8J6
        Length = 366

 Score = 252 (93.8 bits), Expect = 1.2e-19, P = 1.2e-19
 Identities = 81/259 (31%), Positives = 127/259 (49%)

Query:    25 VSPIGILSKIQKIGSHLGHGREEDAHEFLRCAVDTMQSVCLKEFGAK---GKI------- 74
             + P   +S+++K      +  ++DAHEFL   ++T+  +  +E   +   GK+       
Sbjct:    97 IPPKKFISRLRKENDLFDNYMQQDAHEFLNYLLNTIADILQEEKKQEKQNGKLKNGNMNE 156

Query:    75 AEETTLIGLT-----FGGYLRSKIKCLKCLGKSELYERMMDLTVEIDGDIGTLEEALAQF 129
             AEE     LT     F G L ++ +CL C   S   E  +DL+V+++ +  ++   L  F
Sbjct:   157 AEENNKQELTWVHEIFQGTLTNETRCLNCETVSSKDEDFLDLSVDVEQNT-SITHCLRDF 215

Query:   130 TASEILVGENKYYCSRCKSYEKAKKKLTVLEEPNILTIVLKRF----ESGNFGKLNKSVW 185
             + +E L  E KYYC  C S ++A+K++ V + P IL + LKRF    +   + KL+  V 
Sbjct:   216 SNTETLCSEQKYYCETCCSKQEAQKRMRVKKLPMILALHLKRFKYMEQLHRYTKLSYRVV 275

Query:   186 FPEVLNMAPYMSRTGDG---SPMYSLYAVVVHLDVTNATFSGHYVCYVKNSHEEWFRIDD 242
             FP  L +    + +GD      MY L AVVVH    +    GHY+  VK SH  W   DD
Sbjct:   276 FPLELRL---FNTSGDAVNLDRMYDLVAVVVHCG--SGPNRGHYITIVK-SHGFWLLFDD 329

Query:   243 STVIPVKLERVLSEEAYML 261
               V  +  + +  EE Y L
Sbjct:   330 DIVEKIDAQAI--EEFYGL 346


>UNIPROTKB|H0YKU8 [details] [associations]
            symbol:USP3 "Ubiquitin carboxyl-terminal hydrolase"
            species:9606 "Homo sapiens" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0008270 "zinc ion binding"
            evidence=IEA] [GO:0008234 "cysteine-type peptidase activity"
            evidence=IEA] InterPro:IPR001394 InterPro:IPR001607
            InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 GO:GO:0008270 GO:GO:0008234
            Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511 GO:GO:0004221
            EMBL:AC118274 EMBL:AC007950 HGNC:HGNC:12626 ChiTaRS:USP3
            Ensembl:ENST00000559257 Uniprot:H0YKU8
        Length = 443

 Score = 246 (91.7 bits), Expect = 1.2e-19, Sum P(2) = 1.2e-19
 Identities = 68/212 (32%), Positives = 107/212 (50%)

Query:    78 TTLIGLTFGGYLRSKIKCLKCLGKSELYERMMDLTVEI-------------DGDIGTLEE 124
             +T++   FGG L++++ CL C  +S  ++  +DL+++I             +G + +L +
Sbjct:   230 STVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRSKRSKNQENGPVCSLRD 289

Query:   125 ALAQFTASEILVGENKYYCSRCKSYEKAKKKLTVLEEPNILTIVLKRFESGNF--GKLNK 182
              L  FT  E L     Y C +CK  +K+ KK  + + P +L + LKRF    +   K++ 
Sbjct:   290 CLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDT 349

Query:   183 SVWFP-EVLNMAPYM---SRTGDGSPMYSLYAVVVHLDVTNATFSGHYVCYVKNSHE-EW 237
              V FP   L+M  Y+     +G  S +Y L AVVVH    +   SGHY  Y   +HE  W
Sbjct:   350 YVEFPLRGLDMKCYLLEPENSGPESCLYDLAAVVVHHG--SGVGSGHYTAYA--THEGRW 405

Query:   238 FRIDDSTVIPVKLERVLSEEAYMLLYARHSPR 269
             F  +DSTV     E V+  +AY+L Y  H  +
Sbjct:   406 FHFNDSTVTLTDEETVVKAKAYILFYVEHQAK 437

 Score = 51 (23.0 bits), Expect = 1.2e-19, Sum P(2) = 1.2e-19
 Identities = 11/33 (33%), Positives = 19/33 (57%)

Query:    26 SPIGILSKIQKIGSHLGHGREEDAHEFLRCAVD 58
             SP  +   + KI  +    +++DAHEF+R  +D
Sbjct:   161 SPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLD 193


>UNIPROTKB|E9PPM2 [details] [associations]
            symbol:USP2 "Ubiquitin carboxyl-terminal hydrolase"
            species:9606 "Homo sapiens" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0008234 "cysteine-type
            peptidase activity" evidence=IEA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 GO:GO:0008234 GO:GO:0006511 GO:GO:0004221 KO:K11833
            CTD:9099 EMBL:AP003396 RefSeq:NP_001230688.1 UniGene:Hs.524085
            DNASU:9099 GeneID:9099 KEGG:hsa:9099 HGNC:HGNC:12618 ChiTaRS:USP2
            GenomeRNAi:9099 NextBio:34107 IPI:IPI01009002
            ProteinModelPortal:E9PPM2 SMR:E9PPM2 Ensembl:ENST00000455332
            UCSC:uc001pwn.4 ArrayExpress:E9PPM2 Bgee:E9PPM2 Uniprot:E9PPM2
        Length = 362

 Score = 238 (88.8 bits), Expect = 1.3e-19, Sum P(2) = 1.3e-19
 Identities = 64/203 (31%), Positives = 103/203 (50%)

Query:    74 IAEETTLIGLTFGGYLRSKIKCLKCLGKSELYERMMDLTVEID--G--DIGTLEEALAQF 129
             +  E + IG  F G L+S + C  C   S +++   DL++ I   G  ++ TL + +  F
Sbjct:   161 LEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEV-TLMDCMRLF 219

Query:   130 TASEILVGENKYYCSRCKSYEKAKKKLTVLEEPNILTIVLKRFESGNF--GKLNKSVWFP 187
             T  ++L G+ K  C RC+  ++  KK ++   P IL + LKRF        KL   V FP
Sbjct:   220 TKEDVLDGDEKPTCCRCRGRKRCIKKFSIQRFPKILVLHLKRFSESRIRTSKLTTFVNFP 279

Query:   188 -EVLNMAPYMSRTGDGSPMYSLYAVVVHLDVTNATFSGHYVCYVKNSHE-EWFRIDDSTV 245
                L++  + S   + + +Y+LYAV  H   +  T  GHY  Y ++    EW   +DS+V
Sbjct:   280 LRDLDLREFASENTNHA-VYNLYAVSNH---SGTTMGGHYTAYCRSPGTGEWHTFNDSSV 335

Query:   246 IPVKLERVLSEEAYMLLYARHSP 268
              P+   +V + +AY+L Y   SP
Sbjct:   336 TPMSSSQVRTSDAYLLFYELASP 358

 Score = 51 (23.0 bits), Expect = 1.3e-19, Sum P(2) = 1.3e-19
 Identities = 12/38 (31%), Positives = 20/38 (52%)

Query:    25 VSPIGILSKIQKIGSHLGHGREEDAHEFLRCAVDTMQS 62
             VSP    ++IQ+         ++DA EFLR  +D + +
Sbjct:    91 VSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHN 128


>TAIR|locus:2046392 [details] [associations]
            symbol:UBP1 "ubiquitin-specific protease 1" species:3702
            "Arabidopsis thaliana" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0004843 "ubiquitin-specific protease
            activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
            [GO:0006511 "ubiquitin-dependent protein catabolic process"
            evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
            InterPro:IPR001394 InterPro:IPR001607 InterPro:IPR018200
            Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 PROSITE:PS50271 SMART:SM00290 EMBL:CP002685
            GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0008270 GO:GO:0008234
            Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511 GO:GO:0004221
            EMBL:AC003974 eggNOG:COG5560 KO:K11844 EMBL:AF302658
            IPI:IPI00548853 PIR:T00790 RefSeq:NP_565753.1 UniGene:At.38022
            ProteinModelPortal:Q9FPT5 SMR:Q9FPT5 MEROPS:C19.091
            EnsemblPlants:AT2G32780.1 GeneID:817839 KEGG:ath:AT2G32780
            TAIR:At2g32780 HOGENOM:HOG000090316 InParanoid:Q9FPT5 OMA:FFDEPEI
            PhylomeDB:Q9FPT5 ProtClustDB:CLSN2917217 Genevestigator:Q9FPT5
            GermOnline:AT2G32780 Uniprot:Q9FPT5
        Length = 1083

 Score = 180 (68.4 bits), Expect = 1.4e-19, Sum P(3) = 1.4e-19
 Identities = 48/132 (36%), Positives = 67/132 (50%)

Query:   152 AKKKLTVLEEPNILTIVLKRFES---GNFGKLNKSVWFPEVLNMAPYMSR--TGDGSPMY 206
             A+KK+ + + P +LTI LKRF     G   KL+  V F E ++++ YM    + +  P+Y
Sbjct:   954 ARKKVLINKAPPVLTIHLKRFSQDARGRVSKLSGHVDFQEFIDLSKYMDTRCSEEDEPVY 1013

Query:   207 SLYAVVVHLDVTNATFSGHYVCYVKNSHEE-------------WFRIDDSTVIPVKLERV 253
              L  +V HL    A   GHYV Y++  H+E             W+   DS V P  LE V
Sbjct:  1014 RLAGLVEHL---GAMSRGHYVSYIRGGHKERRDSDTKEPNSSIWYHASDSQVRPASLEEV 1070

Query:   254 LSEEAYMLLYAR 265
             L  EAY+L Y R
Sbjct:  1071 LRSEAYILFYER 1082

 Score = 113 (44.8 bits), Expect = 1.4e-19, Sum P(3) = 1.4e-19
 Identities = 27/78 (34%), Positives = 42/78 (53%)

Query:    45 REEDAHEFLRCAVDTM---QSVCLKEFGAKGKIAEET----TLIGLTFGGYLRSKIKCLK 97
             ++ D+HE LRC +D +   +S   K+ G        T    TLI   FGG + S + CL+
Sbjct:   283 QQHDSHELLRCLLDGLSIEESSLRKKLGVSDSNDSSTYQKPTLIDSVFGGEISSTVSCLE 342

Query:    98 CLGKSELYERMMDLTVEI 115
             C   S++YE  MDL++ +
Sbjct:   343 CGHFSKVYEPFMDLSLPV 360

 Score = 68 (29.0 bits), Expect = 1.4e-19, Sum P(3) = 1.4e-19
 Identities = 14/41 (34%), Positives = 23/41 (56%)

Query:   114 EIDGDIGTLEEALAQFTASEILVGENKYYCSRCKSYEKAKK 154
             E D  + +++  LAQFT  EIL  +N ++C  C    K ++
Sbjct:   794 ESDSPV-SVDRCLAQFTKHEILSEDNAWHCENCSKNLKLQR 833


>UNIPROTKB|F1PLI6 [details] [associations]
            symbol:USP22 "Ubiquitin carboxyl-terminal hydrolase"
            species:9615 "Canis lupus familiaris" [GO:0045931 "positive
            regulation of mitotic cell cycle" evidence=IEA] [GO:0045893
            "positive regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0030374 "ligand-dependent nuclear receptor transcription
            coactivator activity" evidence=IEA] [GO:0016578 "histone
            deubiquitination" evidence=IEA] [GO:0016574 "histone
            ubiquitination" evidence=IEA] [GO:0010485 "H4 histone
            acetyltransferase activity" evidence=IEA] [GO:0004843
            "ubiquitin-specific protease activity" evidence=IEA] [GO:0000124
            "SAGA complex" evidence=IEA] [GO:0008270 "zinc ion binding"
            evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
            process" evidence=IEA] [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] InterPro:IPR001394 InterPro:IPR001607
            InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271 GO:GO:0045893
            GO:GO:0046872 GO:GO:0045931 GO:GO:0008270 GO:GO:0000124
            Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511 GO:GO:0030374
            GO:GO:0016578 GO:GO:0004843 GO:GO:0004221 GO:GO:0016574
            GO:GO:0010485 GeneTree:ENSGT00690000101718 OMA:IHEHAKA
            EMBL:AAEX03003735 EMBL:AAEX03003736 Ensembl:ENSCAFT00000029408
            Uniprot:F1PLI6
        Length = 471

 Score = 204 (76.9 bits), Expect = 1.5e-19, Sum P(2) = 1.5e-19
 Identities = 54/160 (33%), Positives = 80/160 (50%)

Query:   121 TLEEALAQFTASEILVGENKYYCSRCKSYEKAKKKLTVLEEPNILTIVLKRFE-SGNFG- 178
             TL + L +FT  E L    K  CS C SY+++ K+LT+ + P +    LKRFE S     
Sbjct:   307 TLTDCLRRFTRPEHLGSSAKIKCSGCHSYQESTKQLTMKKLPIVACFHLKRFEHSAKLRR 366

Query:   179 KLNKSVWFPEVLNMAPYMSRTGDG-------SPM--------YSLYAVVVHLDVTNATFS 223
             K+   V FP  L+M P+M+ + +         P         YSL+AVV H        S
Sbjct:   367 KITTYVSFPLELDMTPFMASSKESRMNGQYQQPTDSLNNDNKYSLFAVVNHQGTLE---S 423

Query:   224 GHYVCYVKNSHEEWFRIDDSTVIPVKLERVLSEEAYMLLY 263
             GHY  +++   ++WF+ DD+ +    +E VL  E Y+L Y
Sbjct:   424 GHYTSFIRQHKDQWFKCDDAIITKASIEDVLDSEGYLLFY 463

 Score = 100 (40.3 bits), Expect = 1.5e-19, Sum P(2) = 1.5e-19
 Identities = 27/96 (28%), Positives = 43/96 (44%)

Query:    24 PVSPIGILSKIQKIGSHLGHGREEDAHEFLRCAVDTMQSVCL-KEFGAKGKIAEETT-LI 81
             P  P  +L  +     HL    ++DAHEFL  A+D +   C   + G K         +I
Sbjct:   184 PHIPYKLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCKGDDNGKKANNPNHCNCII 243

Query:    82 GLTFGGYLRSKIKCLKCLGKSELYERMMDLTVEIDG 117
                F G L+S + C  C G S   +   D+++++ G
Sbjct:   244 DQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPG 279


>UNIPROTKB|F1M625 [details] [associations]
            symbol:Usp46 "Ubiquitin carboxyl-terminal hydrolase"
            species:10116 "Rattus norvegicus" [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA]
            [GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
            InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 RGD:1564808 GO:GO:0007610
            GO:GO:0032228 GO:GO:0006511 GO:GO:0004843 GO:GO:0016579
            GO:GO:0004221 GeneTree:ENSGT00650000093027 IPI:IPI00361813
            Ensembl:ENSRNOT00000002879 Uniprot:F1M625
        Length = 365

 Score = 251 (93.4 bits), Expect = 1.5e-19, P = 1.5e-19
 Identities = 79/256 (30%), Positives = 125/256 (48%)

Query:    25 VSPIGILSKIQKIGSHLGHGREEDAHEFLRCAVDTMQSVCLKEFGAK---GKI------- 74
             + P   +S+++K      +  ++DAHEFL   ++T+  +  +E   +   GK+       
Sbjct:    96 IPPKKFISRLRKENDLFDNYMQQDAHEFLNYLLNTIADILQEEKKQEKQNGKLKNGNMNE 155

Query:    75 -AE----ETTLIGLTFGGYLRSKIKCLKCLGKSELYERMMDLTVEIDGDIGTLEEALAQF 129
              AE    E T +   F G L ++ +CL C   S   E  +DL+V+++ +  ++   L  F
Sbjct:   156 PAENSKPELTWVHEIFQGTLTNETRCLNCETVSSKDEDFLDLSVDVEQNT-SITHCLRDF 214

Query:   130 TASEILVGENKYYCSRCKSYEKAKKKLTVLEEPNILTIVLKRF----ESGNFGKLNKSVW 185
             + +E L  E KYYC  C S ++A+K++ V + P IL + LKRF    +   + KL+  V 
Sbjct:   215 SNTETLCSEQKYYCETCCSKQEAQKRMRVKKLPMILALHLKRFKYMEQLHRYTKLSYRVV 274

Query:   186 FPEVLNMAPYMSRTGDGSPMYSLYAVVVHLDVTNATFSGHYVCYVKNSHEEWFRIDDSTV 245
             FP  L +    S   +   MY L AVVVH    +    GHY+  VK SH  W   DD  V
Sbjct:   275 FPLELRLFNTSSDAVNLDRMYDLVAVVVHCG--SGPNRGHYITIVK-SHGFWLLFDDDIV 331

Query:   246 IPVKLERVLSEEAYML 261
               +  + +  EE Y L
Sbjct:   332 EKIDAQAI--EEFYGL 345


>MGI|MGI:2158502 [details] [associations]
            symbol:Usp48 "ubiquitin specific peptidase 48" species:10090
            "Mus musculus" [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
            "cytoplasm" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
            [GO:0006511 "ubiquitin-dependent protein catabolic process"
            evidence=IEA] [GO:0008233 "peptidase activity" evidence=IEA]
            [GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
            [GO:0016787 "hydrolase activity" evidence=IEA] [GO:0045121
            "membrane raft" evidence=ISO] [GO:0045211 "postsynaptic membrane"
            evidence=ISO] InterPro:IPR001394 InterPro:IPR006615
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 PROSITE:PS51283 MGI:MGI:2158502 Prosite:PS00299
            GO:GO:0005739 GO:GO:0005634 GO:GO:0008234 GO:GO:0006511
            InterPro:IPR019955 PROSITE:PS50053 GO:GO:0004221 eggNOG:COG5077
            HSSP:P54578 GeneTree:ENSGT00630000089581 MEROPS:C19.068 KO:K11858
            CTD:84196 HOGENOM:HOG000231639 HOVERGEN:HBG080368 OrthoDB:EOG4GF3DC
            ChiTaRS:USP48 EMBL:AK220190 EMBL:AK133251 EMBL:AK166158
            EMBL:BC021769 IPI:IPI00458122 IPI:IPI00647978 IPI:IPI00649325
            IPI:IPI00788354 IPI:IPI00788425 RefSeq:NP_570949.2
            UniGene:Mm.218478 ProteinModelPortal:Q3V0C5 SMR:Q3V0C5
            PhosphoSite:Q3V0C5 PaxDb:Q3V0C5 PRIDE:Q3V0C5 DNASU:170707
            Ensembl:ENSMUST00000055131 GeneID:170707 KEGG:mmu:170707
            UCSC:uc008vjh.1 UCSC:uc008vji.1 UCSC:uc008vjj.1 OMA:LSNWPED
            NextBio:370218 Bgee:Q3V0C5 CleanEx:MM_USP48 Genevestigator:Q3V0C5
            GermOnline:ENSMUSG00000043411 Uniprot:Q3V0C5
        Length = 1052

 Score = 264 (98.0 bits), Expect = 1.6e-19, P = 1.6e-19
 Identities = 66/226 (29%), Positives = 118/226 (52%)

Query:    25 VSPIGILSKIQKIGSHLGHGREEDAHEFLRCAVDTMQSVCLKEFGAKGKIAEETTLIGLT 84
             + P G    ++ +G  L  G+++DA EF +  +  ++    K+     K  +   ++   
Sbjct:   163 IDPSGF---VKALG--LDTGQQQDAQEFSKLFMSLLEDTLSKQ-----KNPDVRNVVQQQ 212

Query:    85 FGGYLRSKIKCLKCLGKSELYERMMDLTVEIDGDIGTLEEALAQFTASEILVGENKYYCS 144
             F G       C +C  +S+L  +  +L + I G    L + +++F   E L G+N+Y+C 
Sbjct:   213 FCGEYAYVTVCNQCGRESKLVSKFYELELNIQGH-KQLTDCISEFLKEERLEGDNRYFCE 271

Query:   145 RCKSYEKAKKKLTVLEEPNILTIVLKRF----ESGNFGKLNKSVWFPEVLNMAPYMSRTG 200
              C+S + A +K+ +L  P  L + L RF    ++G+  KLN  + F E L+M PY+   G
Sbjct:   272 NCQSKQNATRKIRLLSLPCTLNLQLMRFVFDRQTGHKKKLNAYIGFSESLDMEPYVEHKG 331

Query:   201 DGSPMYSLYAVVVHLDVTNATFSGHYVCYVKNSHE-EWFRIDDSTV 245
              GS +Y L AV++H  V+   +SGHY+ +VK+    EW++ +D  +
Sbjct:   332 -GSFVYELSAVLIHRGVS--AYSGHYIAHVKDPQSGEWYKFNDEDI 374


>UNIPROTKB|P62068 [details] [associations]
            symbol:USP46 "Ubiquitin carboxyl-terminal hydrolase 46"
            species:9606 "Homo sapiens" [GO:0006511 "ubiquitin-dependent
            protein catabolic process" evidence=IEA] [GO:0016579 "protein
            deubiquitination" evidence=IDA] [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IDA] [GO:0004843
            "ubiquitin-specific protease activity" evidence=IDA] [GO:0032228
            "regulation of synaptic transmission, GABAergic" evidence=ISS]
            [GO:0005515 "protein binding" evidence=IPI] [GO:0007610 "behavior"
            evidence=ISS] InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443
            PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 GO:GO:0007610
            GO:GO:0032228 EMBL:CH471057 GO:GO:0006511 GO:GO:0004843
            GO:GO:0016579 GO:GO:0004221 eggNOG:COG5077 KO:K11842
            OrthoDB:EOG42Z4Q8 HPA:HPA007288 HOVERGEN:HBG054038 OMA:TEPTWVH
            EMBL:GU455414 EMBL:AK022614 EMBL:AK024318 EMBL:AK296493
            EMBL:AK299883 EMBL:AK302438 EMBL:BC037574 IPI:IPI00303458
            IPI:IPI00909695 IPI:IPI00935919 IPI:IPI00936274
            RefSeq:NP_001127695.1 RefSeq:NP_073743.2 UniGene:Hs.7966
            ProteinModelPortal:P62068 SMR:P62068 IntAct:P62068 STRING:P62068
            MEROPS:C19.052 DMDM:49065850 PRIDE:P62068 DNASU:64854
            Ensembl:ENST00000441222 Ensembl:ENST00000508499 GeneID:64854
            KEGG:hsa:64854 UCSC:uc003gzm.4 UCSC:uc003gzn.3 UCSC:uc011bzr.2
            UCSC:uc011bzs.2 CTD:64854 GeneCards:GC04M053376 HGNC:HGNC:20075
            MIM:612849 neXtProt:NX_P62068 PharmGKB:PA134922048
            InParanoid:P62068 GenomeRNAi:64854 NextBio:66987
            ArrayExpress:P62068 Bgee:P62068 CleanEx:HS_USP46
            Genevestigator:P62068 GermOnline:ENSG00000109189 Uniprot:P62068
        Length = 366

 Score = 251 (93.4 bits), Expect = 1.6e-19, P = 1.6e-19
 Identities = 79/256 (30%), Positives = 125/256 (48%)

Query:    25 VSPIGILSKIQKIGSHLGHGREEDAHEFLRCAVDTMQSVCLKEFGAK---GKI------- 74
             + P   +S+++K      +  ++DAHEFL   ++T+  +  +E   +   GK+       
Sbjct:    97 IPPKKFISRLRKENDLFDNYMQQDAHEFLNYLLNTIADILQEEKKQEKQNGKLKNGNMNE 156

Query:    75 -AE----ETTLIGLTFGGYLRSKIKCLKCLGKSELYERMMDLTVEIDGDIGTLEEALAQF 129
              AE    E T +   F G L ++ +CL C   S   E  +DL+V+++ +  ++   L  F
Sbjct:   157 PAENNKPELTWVHEIFQGTLTNETRCLNCETVSSKDEDFLDLSVDVEQNT-SITHCLRDF 215

Query:   130 TASEILVGENKYYCSRCKSYEKAKKKLTVLEEPNILTIVLKRF----ESGNFGKLNKSVW 185
             + +E L  E KYYC  C S ++A+K++ V + P IL + LKRF    +   + KL+  V 
Sbjct:   216 SNTETLCSEQKYYCETCCSKQEAQKRMRVKKLPMILALHLKRFKYMEQLHRYTKLSYRVV 275

Query:   186 FPEVLNMAPYMSRTGDGSPMYSLYAVVVHLDVTNATFSGHYVCYVKNSHEEWFRIDDSTV 245
             FP  L +    S   +   MY L AVVVH    +    GHY+  VK SH  W   DD  V
Sbjct:   276 FPLELRLFNTSSDAVNLDRMYDLVAVVVHCG--SGPNRGHYITIVK-SHGFWLLFDDDIV 332

Query:   246 IPVKLERVLSEEAYML 261
               +  + +  EE Y L
Sbjct:   333 EKIDAQAI--EEFYGL 346


>UNIPROTKB|Q5RBQ4 [details] [associations]
            symbol:USP46 "Ubiquitin carboxyl-terminal hydrolase 46"
            species:9601 "Pongo abelii" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=ISS] [GO:0004843 "ubiquitin-specific protease
            activity" evidence=ISS] [GO:0007610 "behavior" evidence=ISS]
            [GO:0016579 "protein deubiquitination" evidence=ISS] [GO:0032228
            "regulation of synaptic transmission, GABAergic" evidence=ISS]
            InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 GO:GO:0007610 GO:GO:0032228
            GO:GO:0006511 GO:GO:0004843 GO:GO:0016579 GO:GO:0004221 HSSP:Q93009
            KO:K11842 HOGENOM:HOG000231498 HOVERGEN:HBG054038 CTD:64854
            EMBL:CR858584 EMBL:CR858606 RefSeq:NP_001127337.1
            RefSeq:NP_001128936.1 UniGene:Pab.19202 UniGene:Pab.19798
            ProteinModelPortal:Q5RBQ4 SMR:Q5RBQ4 PRIDE:Q5RBQ4 GeneID:100174399
            GeneID:100189895 KEGG:pon:100174399 KEGG:pon:100189895
            InParanoid:Q5RBN2 Uniprot:Q5RBQ4
        Length = 366

 Score = 251 (93.4 bits), Expect = 1.6e-19, P = 1.6e-19
 Identities = 79/256 (30%), Positives = 125/256 (48%)

Query:    25 VSPIGILSKIQKIGSHLGHGREEDAHEFLRCAVDTMQSVCLKEFGAK---GKI------- 74
             + P   +S+++K      +  ++DAHEFL   ++T+  +  +E   +   GK+       
Sbjct:    97 IPPKKFISRLRKENDLFDNYMQQDAHEFLNYLLNTIADILQEEKKQEKQNGKLKNGNMNE 156

Query:    75 -AE----ETTLIGLTFGGYLRSKIKCLKCLGKSELYERMMDLTVEIDGDIGTLEEALAQF 129
              AE    E T +   F G L ++ +CL C   S   E  +DL+V+++ +  ++   L  F
Sbjct:   157 PAENNKPELTWVHEIFQGTLTNETRCLNCETVSSKDEDFLDLSVDVEQNT-SITHCLRDF 215

Query:   130 TASEILVGENKYYCSRCKSYEKAKKKLTVLEEPNILTIVLKRF----ESGNFGKLNKSVW 185
             + +E L  E KYYC  C S ++A+K++ V + P IL + LKRF    +   + KL+  V 
Sbjct:   216 SNTETLCSEQKYYCETCCSKQEAQKRMRVKKLPMILALHLKRFKYMEQLHRYTKLSYRVV 275

Query:   186 FPEVLNMAPYMSRTGDGSPMYSLYAVVVHLDVTNATFSGHYVCYVKNSHEEWFRIDDSTV 245
             FP  L +    S   +   MY L AVVVH    +    GHY+  VK SH  W   DD  V
Sbjct:   276 FPLELRLFNTSSDAVNLDRMYDLVAVVVHCG--SGPNRGHYITIVK-SHGFWLLFDDDIV 332

Query:   246 IPVKLERVLSEEAYML 261
               +  + +  EE Y L
Sbjct:   333 EKIDAQAI--EEFYGL 346


>MGI|MGI:1916977 [details] [associations]
            symbol:Usp46 "ubiquitin specific peptidase 46" species:10090
            "Mus musculus" [GO:0001662 "behavioral fear response" evidence=IMP]
            [GO:0004221 "ubiquitin thiolesterase activity" evidence=ISO]
            [GO:0004843 "ubiquitin-specific protease activity" evidence=ISO]
            [GO:0005575 "cellular_component" evidence=ND] [GO:0006508
            "proteolysis" evidence=IEA] [GO:0006511 "ubiquitin-dependent
            protein catabolic process" evidence=IEA] [GO:0007610 "behavior"
            evidence=IMP] [GO:0008233 "peptidase activity" evidence=IEA]
            [GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
            [GO:0016579 "protein deubiquitination" evidence=ISO] [GO:0016787
            "hydrolase activity" evidence=IEA] [GO:0032228 "regulation of
            synaptic transmission, GABAergic" evidence=IMP] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 MGI:MGI:1916977 GO:GO:0032228 GO:GO:0006511
            GO:GO:0001662 GO:GO:0004843 GO:GO:0016579 GO:GO:0004221
            eggNOG:COG5077 KO:K11842 GeneTree:ENSGT00650000093027
            HOGENOM:HOG000231498 OrthoDB:EOG42Z4Q8 HOVERGEN:HBG054038
            OMA:TEPTWVH MEROPS:C19.052 CTD:64854 EMBL:AK145298 EMBL:BC039916
            IPI:IPI00228384 RefSeq:NP_808229.1 UniGene:Mm.48795
            ProteinModelPortal:P62069 SMR:P62069 STRING:P62069 PaxDb:P62069
            PRIDE:P62069 Ensembl:ENSMUST00000068058 GeneID:69727 KEGG:mmu:69727
            InParanoid:Q3ULU5 NextBio:330198 Bgee:P62069 CleanEx:MM_USP46
            Genevestigator:P62069 GermOnline:ENSMUSG00000054814 Uniprot:P62069
        Length = 366

 Score = 251 (93.4 bits), Expect = 1.6e-19, P = 1.6e-19
 Identities = 79/256 (30%), Positives = 125/256 (48%)

Query:    25 VSPIGILSKIQKIGSHLGHGREEDAHEFLRCAVDTMQSVCLKEFGAK---GKI------- 74
             + P   +S+++K      +  ++DAHEFL   ++T+  +  +E   +   GK+       
Sbjct:    97 IPPKKFISRLRKENDLFDNYMQQDAHEFLNYLLNTIADILQEEKKQEKQNGKLKNGNMNE 156

Query:    75 -AE----ETTLIGLTFGGYLRSKIKCLKCLGKSELYERMMDLTVEIDGDIGTLEEALAQF 129
              AE    E T +   F G L ++ +CL C   S   E  +DL+V+++ +  ++   L  F
Sbjct:   157 PAENNKPELTWVHEIFQGTLTNETRCLNCETVSSKDEDFLDLSVDVEQNT-SITHCLRDF 215

Query:   130 TASEILVGENKYYCSRCKSYEKAKKKLTVLEEPNILTIVLKRF----ESGNFGKLNKSVW 185
             + +E L  E KYYC  C S ++A+K++ V + P IL + LKRF    +   + KL+  V 
Sbjct:   216 SNTETLCSEQKYYCETCCSKQEAQKRMRVKKLPMILALHLKRFKYMEQLHRYTKLSYRVV 275

Query:   186 FPEVLNMAPYMSRTGDGSPMYSLYAVVVHLDVTNATFSGHYVCYVKNSHEEWFRIDDSTV 245
             FP  L +    S   +   MY L AVVVH    +    GHY+  VK SH  W   DD  V
Sbjct:   276 FPLELRLFNTSSDAVNLDRMYDLVAVVVHCG--SGPNRGHYITIVK-SHGFWLLFDDDIV 332

Query:   246 IPVKLERVLSEEAYML 261
               +  + +  EE Y L
Sbjct:   333 EKIDAQAI--EEFYGL 346


>RGD|1564808 [details] [associations]
            symbol:Usp46 "ubiquitin specific peptidase 46" species:10116
            "Rattus norvegicus" [GO:0001662 "behavioral fear response"
            evidence=ISO] [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=ISO] [GO:0004843 "ubiquitin-specific protease activity"
            evidence=ISO] [GO:0007610 "behavior" evidence=ISO] [GO:0016579
            "protein deubiquitination" evidence=ISO] [GO:0032228 "regulation of
            synaptic transmission, GABAergic" evidence=ISO] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 RGD:1564808 GO:GO:0008234 GO:GO:0006511
            GO:GO:0004221 KO:K11842 CTD:64854 EMBL:GU455413
            RefSeq:NP_001178525.1 UniGene:Rn.12107 GeneID:289584
            KEGG:rno:289584 Uniprot:G8ACC6
        Length = 366

 Score = 251 (93.4 bits), Expect = 1.6e-19, P = 1.6e-19
 Identities = 79/256 (30%), Positives = 125/256 (48%)

Query:    25 VSPIGILSKIQKIGSHLGHGREEDAHEFLRCAVDTMQSVCLKEFGAK---GKI------- 74
             + P   +S+++K      +  ++DAHEFL   ++T+  +  +E   +   GK+       
Sbjct:    97 IPPKKFISRLRKENDLFDNYMQQDAHEFLNYLLNTIADILQEEKKQEKQNGKLKNGNMNE 156

Query:    75 -AE----ETTLIGLTFGGYLRSKIKCLKCLGKSELYERMMDLTVEIDGDIGTLEEALAQF 129
              AE    E T +   F G L ++ +CL C   S   E  +DL+V+++ +  ++   L  F
Sbjct:   157 PAENSKPELTWVHEIFQGTLTNETRCLNCETVSSKDEDFLDLSVDVEQNT-SITHCLRDF 215

Query:   130 TASEILVGENKYYCSRCKSYEKAKKKLTVLEEPNILTIVLKRF----ESGNFGKLNKSVW 185
             + +E L  E KYYC  C S ++A+K++ V + P IL + LKRF    +   + KL+  V 
Sbjct:   216 SNTETLCSEQKYYCETCCSKQEAQKRMRVKKLPMILALHLKRFKYMEQLHRYTKLSYRVV 275

Query:   186 FPEVLNMAPYMSRTGDGSPMYSLYAVVVHLDVTNATFSGHYVCYVKNSHEEWFRIDDSTV 245
             FP  L +    S   +   MY L AVVVH    +    GHY+  VK SH  W   DD  V
Sbjct:   276 FPLELRLFNTSSDAVNLDRMYDLVAVVVHCG--SGPNRGHYITIVK-SHGFWLLFDDDIV 332

Query:   246 IPVKLERVLSEEAYML 261
               +  + +  EE Y L
Sbjct:   333 EKIDAQAI--EEFYGL 346


>UNIPROTKB|F1PHD5 [details] [associations]
            symbol:USP51 "Ubiquitin carboxyl-terminal hydrolase"
            species:9615 "Canis lupus familiaris" [GO:0008234 "cysteine-type
            peptidase activity" evidence=IEA] [GO:0008270 "zinc ion binding"
            evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
            process" evidence=IEA] [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] InterPro:IPR001394 InterPro:IPR001607
            InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271 GO:GO:0046872
            GO:GO:0008270 GO:GO:0008234 Gene3D:3.30.40.10 InterPro:IPR013083
            GO:GO:0006511 GO:GO:0004221 GeneTree:ENSGT00690000101718
            EMBL:AAEX03026345 OMA:YQCFVWC Ensembl:ENSCAFT00000025289
            Uniprot:F1PHD5
        Length = 514

 Score = 202 (76.2 bits), Expect = 1.8e-19, Sum P(2) = 1.8e-19
 Identities = 52/162 (32%), Positives = 81/162 (50%)

Query:   119 IGTLEEALAQFTASEILVGENKYYCSRCKSYEKAKKKLTVLEEPNILTIVLKRFESG--N 176
             I TL + L +FT  E L    K  C  C+SY+++ K+LT+ + P +     KRFE     
Sbjct:   337 ITTLTDCLRRFTRPEHLGSSAKIKCGSCQSYQESTKQLTMNKLPVVACFHFKRFEHSAKQ 396

Query:   177 FGKLNKSVWFPEVLNMAPYM-----SR----------TGDGSPMYSLYAVVVHLDVTNAT 221
               K+   + FP  L+M P+M     SR          +G+    YSL+AVV H       
Sbjct:   397 RRKITTYISFPLELDMTPFMASSKESRMNGQLQLPTNSGNDENKYSLFAVVNHQGTLE-- 454

Query:   222 FSGHYVCYVKNSHEEWFRIDDSTVIPVKLERVLSEEAYMLLY 263
              SGHY  ++++  ++WF+ DD+ +    ++ VL  E Y+L Y
Sbjct:   455 -SGHYTSFIRHHKDQWFKCDDAVITKASIKDVLDSEGYLLFY 495

 Score = 103 (41.3 bits), Expect = 1.8e-19, Sum P(2) = 1.8e-19
 Identities = 31/98 (31%), Positives = 46/98 (46%)

Query:    24 PVSPIGILSKIQKIGSHLGHGREEDAHEFLRCAVDTMQSVCLKEFGAKGKIAEETT---- 79
             P  P  +L  +     HL   R++DAHEFL  A+D +   C K   A GK A        
Sbjct:   217 PHVPYKLLHLVWIHARHLAGYRQQDAHEFLIAALDVLHRHC-KGDDA-GKAANNPNHCNC 274

Query:    80 LIGLTFGGYLRSKIKCLKCLGKSELYERMMDLTVEIDG 117
             +I   F G L+S + C  C G S   +   D+++++ G
Sbjct:   275 IIDQIFTGGLQSDVTCQACHGVSTTIDPCWDISLDLPG 312


>UNIPROTKB|F1RW22 [details] [associations]
            symbol:LOC100515460 "Ubiquitin carboxyl-terminal hydrolase"
            species:9823 "Sus scrofa" [GO:0008234 "cysteine-type peptidase
            activity" evidence=IEA] [GO:0008270 "zinc ion binding"
            evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
            process" evidence=IEA] [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] InterPro:IPR001394 InterPro:IPR001607
            InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271 GO:GO:0046872
            GO:GO:0008270 GO:GO:0008234 Gene3D:3.30.40.10 InterPro:IPR013083
            GO:GO:0006511 GO:GO:0004221 GeneTree:ENSGT00690000101718
            OMA:YQCFVWC EMBL:FP085546 Ensembl:ENSSSCT00000013455 Uniprot:F1RW22
        Length = 523

 Score = 202 (76.2 bits), Expect = 2.0e-19, Sum P(2) = 2.0e-19
 Identities = 52/162 (32%), Positives = 81/162 (50%)

Query:   119 IGTLEEALAQFTASEILVGENKYYCSRCKSYEKAKKKLTVLEEPNILTIVLKRFESG--N 176
             I TL + L +FT  E L    K  C  C+SY+++ K+LT+ + P +     KRFE     
Sbjct:   357 ITTLTDCLRRFTRPEHLGSSAKIKCGSCQSYQESTKQLTMNKLPVVACFHFKRFEHSAKQ 416

Query:   177 FGKLNKSVWFPEVLNMAPYM-----SR----------TGDGSPMYSLYAVVVHLDVTNAT 221
               K+   + FP  L+M P+M     SR          +G+    YSL+AVV H       
Sbjct:   417 RRKITTYISFPLELDMTPFMASSKESRMNGQLQLPTNSGNDENKYSLFAVVNHQGTLE-- 474

Query:   222 FSGHYVCYVKNSHEEWFRIDDSTVIPVKLERVLSEEAYMLLY 263
              SGHY  ++++  ++WF+ DD+ +    ++ VL  E Y+L Y
Sbjct:   475 -SGHYTSFIRHHKDQWFKCDDAVITKASIKDVLDSEGYLLFY 515

 Score = 103 (41.3 bits), Expect = 2.0e-19, Sum P(2) = 2.0e-19
 Identities = 31/98 (31%), Positives = 46/98 (46%)

Query:    24 PVSPIGILSKIQKIGSHLGHGREEDAHEFLRCAVDTMQSVCLKEFGAKGKIAEETT---- 79
             P  P  +L  +     HL   R++DAHEFL  A+D +   C K   A GK A        
Sbjct:   237 PHVPYKLLHLVWIHARHLAGYRQQDAHEFLIAALDVLHRHC-KGDDA-GKAANNPNHCNC 294

Query:    80 LIGLTFGGYLRSKIKCLKCLGKSELYERMMDLTVEIDG 117
             +I   F G L+S + C  C G S   +   D+++++ G
Sbjct:   295 IIDQIFTGGLQSDVTCQACHGVSTTIDPCWDISLDLPG 332


>ZFIN|ZDB-GENE-040426-1219 [details] [associations]
            symbol:usp20 "ubiquitin specific protease 20"
            species:7955 "Danio rerio" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA;ISS] [GO:0006511 "ubiquitin-dependent
            protein catabolic process" evidence=IEA] [GO:0008270 "zinc ion
            binding" evidence=IEA] [GO:0004197 "cysteine-type endopeptidase
            activity" evidence=ISS] [GO:0008277 "regulation of G-protein
            coupled receptor protein signaling pathway" evidence=ISS]
            [GO:0016579 "protein deubiquitination" evidence=ISS] [GO:0070536
            "protein K63-linked deubiquitination" evidence=ISS] [GO:0071108
            "protein K48-linked deubiquitination" evidence=ISS] [GO:0021551
            "central nervous system morphogenesis" evidence=IMP] [GO:0016787
            "hydrolase activity" evidence=IEA] [GO:0006508 "proteolysis"
            evidence=IEA] [GO:0008234 "cysteine-type peptidase activity"
            evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
            [GO:0006897 "endocytosis" evidence=IEA] [GO:0005737 "cytoplasm"
            evidence=IEA] [GO:0008233 "peptidase activity" evidence=IEA]
            [GO:0048471 "perinuclear region of cytoplasm" evidence=IEA]
            InterPro:IPR001394 InterPro:IPR001607 InterPro:IPR006615
            InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 Pfam:PF06337
            PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271
            PROSITE:PS51283 SMART:SM00695 ZFIN:ZDB-GENE-040426-1219
            GO:GO:0046872 GO:GO:0008270 GO:GO:0008234 Gene3D:3.30.40.10
            InterPro:IPR013083 GO:GO:0006511 GO:GO:0004221 GO:GO:0021551
            GeneTree:ENSGT00690000101718 OMA:ADYGQIS EMBL:BX927184
            IPI:IPI00920034 Ensembl:ENSDART00000006021 ArrayExpress:F1QTS8
            Bgee:F1QTS8 Uniprot:F1QTS8
        Length = 913

 Score = 224 (83.9 bits), Expect = 2.2e-19, Sum P(3) = 2.2e-19
 Identities = 58/157 (36%), Positives = 81/157 (51%)

Query:   117 GDIGTLEEALAQFTASEILVGENKYYCSRCKSYEKAKKKLTVLEEPNILTIVLKRFESG- 175
             G + TLE+ LA F A++ L G+N Y C RCK      K   VL  P IL I LKRF    
Sbjct:   534 GPMVTLEDCLAAFFAADELKGDNMYSCERCKKLRNGVKYCKVLRLPEILCIHLKRFRHEV 593

Query:   176 --NFGKLNKSVWFP-EVLNMAPYMSRTGDGS-PMYSLYAVVVHLDVTNATFSGHYVCYVK 231
               +F K+N  V FP E L++ P++++        Y L +V+ H        SGHY+ Y +
Sbjct:   594 MYSF-KINSHVSFPLEGLDLKPFLAKESPSQITTYDLLSVICHHGTAG---SGHYIAYCQ 649

Query:   232 NS-HEEWFRIDDSTVIPVKLERVLSEEAYMLLYARHS 267
             N  + +W+  DD  V  V    V + EAY+L Y + S
Sbjct:   650 NVINGQWYEFDDQYVTEVHETVVQNAEAYVLFYRKSS 686

 Score = 65 (27.9 bits), Expect = 2.2e-19, Sum P(3) = 2.2e-19
 Identities = 22/77 (28%), Positives = 35/77 (45%)

Query:     2 PGLHSTFDVVSCLILNAKDGSYPVSPIGILSKIQKIGSHLGHGREEDAHEFLRCAVDTMQ 61
             P L  ++  +   + + K  SY V P  +   I+ +        ++D  EFLRC +D + 
Sbjct:   189 PALCKSYQKLISELWHKKRPSYVV-PTTLFHGIKLVNPMFRGYAQQDTQEFLRCLMDQLH 247

Query:    62 SVCLKE--FGAKGKIAE 76
                LKE  F   G I+E
Sbjct:   248 EE-LKEPLFDCSGGISE 263

 Score = 62 (26.9 bits), Expect = 2.2e-19, Sum P(3) = 2.2e-19
 Identities = 18/60 (30%), Positives = 29/60 (48%)

Query:    71 KGKIAEETTLIGLTFGGYLRSKIKCLKCLGKSELYERMMDLTVEIDG--DIGTLEEALAQ 128
             K K +   ++I   F G + S ++CL C   S   E   DL++ I G  D+  L  ++ Q
Sbjct:   435 KKKQSRFRSVISDIFDGSILSLVQCLTCDRVSTTVETFQDLSLPIPGKEDLAKLHSSIHQ 494


>UNIPROTKB|E2RG22 [details] [associations]
            symbol:USP12 "Ubiquitin carboxyl-terminal hydrolase"
            species:9615 "Canis lupus familiaris" [GO:0016579 "protein
            deubiquitination" evidence=IEA] [GO:0004843 "ubiquitin-specific
            protease activity" evidence=IEA] [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] [GO:0004197 "cysteine-type
            endopeptidase activity" evidence=IEA] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA]
            InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 GO:GO:0006511 GO:GO:0004197
            GO:GO:0004843 GO:GO:0016579 GO:GO:0004221 KO:K11842 CTD:219333
            GeneTree:ENSGT00650000093027 OMA:SKFASFC EMBL:AAEX03014246
            EMBL:AAEX03014247 RefSeq:XP_543159.2 Ensembl:ENSCAFT00000024112
            GeneID:486033 KEGG:cfa:486033 NextBio:20859899 Uniprot:E2RG22
        Length = 370

 Score = 250 (93.1 bits), Expect = 2.6e-19, P = 2.6e-19
 Identities = 80/259 (30%), Positives = 127/259 (49%)

Query:    25 VSPIGILSKIQKIGSHLGHGREEDAHEFLRCAVDTMQSVCL------KEFGA--KGKIAE 76
             + P   +++++K      +  ++DAHEFL   ++T+  +        K+ G    G I  
Sbjct:   101 IPPKKFITRLRKENELFDNYMQQDAHEFLNYLLNTIADILQEERKQEKQNGRLPNGNIDS 160

Query:    77 ET-------TLIGLTFGGYLRSKIKCLKCLGKSELYERMMDLTVEIDGDIGTLEEALAQF 129
             E        T +   F G L ++ +CL C   S   E  +DL+V+++ +  ++   L  F
Sbjct:   161 ENNNSTPDPTWVHEIFQGTLTNETRCLTCETISSKDEDFLDLSVDVEQNT-SITHCLRGF 219

Query:   130 TASEILVGENKYYCSRCKSYEKAKKKLTVLEEPNILTIVLKRF----ESGNFGKLNKSVW 185
             + +E L  E KYYC  C+S ++A K++ V + P IL + LKRF    +   + KL+  V 
Sbjct:   220 SNTETLCSEYKYYCEECRSKQEAHKRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVV 279

Query:   186 FPEVLNMAPYMSRTGDGS-P--MYSLYAVVVHLDVTNATFSGHYVCYVKNSHEEWFRIDD 242
             FP  L +    + +GD + P  MY L AVVVH    +    GHY+  VK SHE W   DD
Sbjct:   280 FPLELRL---FNTSGDATNPDRMYDLVAVVVHCG--SGPNRGHYIAIVK-SHEFWLLFDD 333

Query:   243 STVIPVKLERVLSEEAYML 261
               V  +  + +  EE Y L
Sbjct:   334 DIVEKIDAQAI--EEFYGL 350


>UNIPROTKB|F1MZM8 [details] [associations]
            symbol:USP46 "Ubiquitin carboxyl-terminal hydrolase"
            species:9913 "Bos taurus" [GO:0032228 "regulation of synaptic
            transmission, GABAergic" evidence=IEA] [GO:0016579 "protein
            deubiquitination" evidence=IEA] [GO:0007610 "behavior"
            evidence=IEA] [GO:0004843 "ubiquitin-specific protease activity"
            evidence=IEA] [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
            process" evidence=IEA] InterPro:IPR001394 InterPro:IPR018200
            Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235
            GO:GO:0007610 GO:GO:0032228 GO:GO:0006511 GO:GO:0004843
            GO:GO:0016579 GO:GO:0004221 GeneTree:ENSGT00650000093027
            OMA:TEPTWVH EMBL:DAAA02017666 EMBL:DAAA02017667 IPI:IPI00731835
            UniGene:Bt.25057 Ensembl:ENSBTAT00000004472 NextBio:20872216
            Uniprot:F1MZM8
        Length = 382

 Score = 251 (93.4 bits), Expect = 2.6e-19, P = 2.6e-19
 Identities = 79/256 (30%), Positives = 125/256 (48%)

Query:    25 VSPIGILSKIQKIGSHLGHGREEDAHEFLRCAVDTMQSVCLKEFGAK---GKI------- 74
             + P   +S+++K      +  ++DAHEFL   ++T+  +  +E   +   GK+       
Sbjct:   113 IPPKKFISRLRKENDLFDNYMQQDAHEFLNYLLNTIADILQEEKKQEKQNGKLKNGNMNE 172

Query:    75 -AE----ETTLIGLTFGGYLRSKIKCLKCLGKSELYERMMDLTVEIDGDIGTLEEALAQF 129
              AE    E T +   F G L ++ +CL C   S   E  +DL+V+++ +  ++   L  F
Sbjct:   173 PAENNKPELTWVHEIFQGTLTNETRCLNCETVSSKDEDFLDLSVDVEQNT-SITHCLRDF 231

Query:   130 TASEILVGENKYYCSRCKSYEKAKKKLTVLEEPNILTIVLKRF----ESGNFGKLNKSVW 185
             + +E L  E KYYC  C S ++A+K++ V + P IL + LKRF    +   + KL+  V 
Sbjct:   232 SNTETLCSEQKYYCETCCSKQEAQKRMRVKKLPMILALHLKRFKYMEQLHRYTKLSYRVV 291

Query:   186 FPEVLNMAPYMSRTGDGSPMYSLYAVVVHLDVTNATFSGHYVCYVKNSHEEWFRIDDSTV 245
             FP  L +    S   +   MY L AVVVH    +    GHY+  VK SH  W   DD  V
Sbjct:   292 FPLELRLFNTSSDAVNLDRMYDLVAVVVHCG--SGPNRGHYITIVK-SHGFWLLFDDDIV 348

Query:   246 IPVKLERVLSEEAYML 261
               +  + +  EE Y L
Sbjct:   349 EKIDAQAI--EEFYGL 362


>ZFIN|ZDB-GENE-060228-3 [details] [associations]
            symbol:usp12a "ubiquitin specific peptidase 12a"
            species:7955 "Danio rerio" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA;ISS] [GO:0006511 "ubiquitin-dependent
            protein catabolic process" evidence=IEA] [GO:0004843
            "ubiquitin-specific protease activity" evidence=ISS] [GO:0004197
            "cysteine-type endopeptidase activity" evidence=ISS] [GO:0016579
            "protein deubiquitination" evidence=ISS] [GO:0016787 "hydrolase
            activity" evidence=IEA] [GO:0008234 "cysteine-type peptidase
            activity" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
            [GO:0008233 "peptidase activity" evidence=IEA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 ZFIN:ZDB-GENE-060228-3 GO:GO:0006511 GO:GO:0004197
            GO:GO:0004843 GO:GO:0016579 GO:GO:0004221 eggNOG:COG5077 KO:K11842
            GeneTree:ENSGT00650000093027 HOGENOM:HOG000231498 OMA:SKFASFC
            OrthoDB:EOG42Z4Q8 EMBL:BC115286 IPI:IPI00508425
            RefSeq:NP_001077025.1 UniGene:Dr.5972 Ensembl:ENSDART00000112670
            GeneID:565736 KEGG:dre:565736 CTD:565736 NextBio:20886545
            Bgee:A4FUN7 Uniprot:A4FUN7
        Length = 371

 Score = 250 (93.1 bits), Expect = 2.6e-19, P = 2.6e-19
 Identities = 81/270 (30%), Positives = 131/270 (48%)

Query:    15 ILNAKDGSYPVSPIGILSKIQKIGSHLGHGREEDAHEFLRCAVDTMQSVCL---KEFGAK 71
             I N K     + P   +++++K      +  ++DAHEFL   ++T+  +     K+    
Sbjct:    91 IANQKRKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLLNTIADLLQEERKQDKQN 150

Query:    72 GKIAE-------------ETTLIGLTFGGYLRSKIKCLKCLGKSELYERMMDLTVEIDGD 118
             GK+A               TT +   F G L ++ +CL C   S   E  +DL+V+++ +
Sbjct:   151 GKLANGTLDSQNNNSTPPSTTWVHEIFQGTLTNETRCLTCETISSKDEDFLDLSVDVEQN 210

Query:   119 IGTLEEALAQFTASEILVGENKYYCSRCKSYEKAKKKLTVLEEPNILTIVLKRF----ES 174
               ++   L  F+ +E L  E KYYC  C+S ++A K++ V + P IL + LKRF    + 
Sbjct:   211 T-SITHCLRGFSNTETLCSEYKYYCEECRSKQEAHKRMRVKKLPMILALHLKRFKYMEQL 269

Query:   175 GNFGKLNKSVWFPEVLNMAPYMSRTGDGS-P--MYSLYAVVVHLDVTNATFSGHYVCYVK 231
               + KL+  V FP  L +    + +GD + P  +Y L AVVVH    +    GHY+  VK
Sbjct:   270 QRYTKLSYRVVFPLELRL---FNTSGDATNPERLYDLVAVVVHCG--SGPNRGHYIAIVK 324

Query:   232 NSHEEWFRIDDSTVIPVKLERVLSEEAYML 261
              SH+ W   DD  V  +  + +  EE Y L
Sbjct:   325 -SHDFWLLFDDDIVEKIDAQAI--EEFYGL 351


>UNIPROTKB|Q6JHV3 [details] [associations]
            symbol:USP3 "Ubiquitin carboxyl-terminal hydrolase"
            species:9606 "Homo sapiens" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0008270 "zinc ion binding"
            evidence=IEA] [GO:0008234 "cysteine-type peptidase activity"
            evidence=IEA] InterPro:IPR001394 InterPro:IPR001607
            InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271 GO:GO:0046872
            GO:GO:0008270 GO:GO:0008234 Gene3D:3.30.40.10 InterPro:IPR013083
            GO:GO:0006511 GO:GO:0004221 EMBL:AC118274 EMBL:AC007950
            UniGene:Hs.458499 HGNC:HGNC:12626 HOVERGEN:HBG103589 ChiTaRS:USP3
            EMBL:AY461579 IPI:IPI01015614 SMR:Q6JHV3 STRING:Q6JHV3
            Ensembl:ENST00000268049 UCSC:uc002amh.3 Uniprot:Q6JHV3
        Length = 498

 Score = 246 (91.7 bits), Expect = 2.7e-19, Sum P(2) = 2.7e-19
 Identities = 68/212 (32%), Positives = 107/212 (50%)

Query:    78 TTLIGLTFGGYLRSKIKCLKCLGKSELYERMMDLTVEI-------------DGDIGTLEE 124
             +T++   FGG L++++ CL C  +S  ++  +DL+++I             +G + +L +
Sbjct:   285 STVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRSKRSKNQENGPVCSLRD 344

Query:   125 ALAQFTASEILVGENKYYCSRCKSYEKAKKKLTVLEEPNILTIVLKRFESGNF--GKLNK 182
              L  FT  E L     Y C +CK  +K+ KK  + + P +L + LKRF    +   K++ 
Sbjct:   345 CLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDT 404

Query:   183 SVWFP-EVLNMAPYM---SRTGDGSPMYSLYAVVVHLDVTNATFSGHYVCYVKNSHE-EW 237
              V FP   L+M  Y+     +G  S +Y L AVVVH    +   SGHY  Y   +HE  W
Sbjct:   405 YVEFPLRGLDMKCYLLEPENSGPESCLYDLAAVVVHHG--SGVGSGHYTAYA--THEGRW 460

Query:   238 FRIDDSTVIPVKLERVLSEEAYMLLYARHSPR 269
             F  +DSTV     E V+  +AY+L Y  H  +
Sbjct:   461 FHFNDSTVTLTDEETVVKAKAYILFYVEHQAK 492

 Score = 51 (23.0 bits), Expect = 2.7e-19, Sum P(2) = 2.7e-19
 Identities = 11/33 (33%), Positives = 19/33 (57%)

Query:    26 SPIGILSKIQKIGSHLGHGREEDAHEFLRCAVD 58
             SP  +   + KI  +    +++DAHEF+R  +D
Sbjct:   216 SPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLD 248


>UNIPROTKB|F1M722 [details] [associations]
            symbol:Usp48 "Ubiquitin carboxyl-terminal hydrolase 48"
            species:10116 "Rattus norvegicus" [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA]
            InterPro:IPR001394 InterPro:IPR006615 InterPro:IPR018200
            Pfam:PF00443 PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS51283
            RGD:735213 GO:GO:0005739 GO:GO:0005634 GO:GO:0006511
            InterPro:IPR019955 PROSITE:PS50053 GO:GO:0004221 IPI:IPI00782270
            Ensembl:ENSRNOT00000055944 ArrayExpress:F1M722 Uniprot:F1M722
        Length = 1076

 Score = 262 (97.3 bits), Expect = 2.7e-19, P = 2.7e-19
 Identities = 65/226 (28%), Positives = 118/226 (52%)

Query:    25 VSPIGILSKIQKIGSHLGHGREEDAHEFLRCAVDTMQSVCLKEFGAKGKIAEETTLIGLT 84
             + P G    ++ +G  L  G+++DA EF +  +  ++    K+     K  +   ++   
Sbjct:   187 IDPSGF---VKALG--LDTGQQQDAQEFSKLFMSLLEDTLSKQ-----KNPDVRNVVQQQ 236

Query:    85 FGGYLRSKIKCLKCLGKSELYERMMDLTVEIDGDIGTLEEALAQFTASEILVGENKYYCS 144
             F G       C +C  +S+L  +  +L + I G    L + +++F   E L G+N+Y+C 
Sbjct:   237 FCGEYAYVTVCSQCGRESKLVSKFYELELNIQGH-KQLTDCISEFLKEERLEGDNRYFCE 295

Query:   145 RCKSYEKAKKKLTVLEEPNILTIVLKRF----ESGNFGKLNKSVWFPEVLNMAPYMSRTG 200
              C+S + A +K+ +L  P  L + L RF    ++G+  KLN  + F E L+M PY+   G
Sbjct:   296 NCQSKQNATRKIRLLSLPCTLNLQLMRFVFDRQTGHKKKLNAYIGFSESLDMEPYVEHKG 355

Query:   201 DGSPMYSLYAVVVHLDVTNATFSGHYVCYVKNSHE-EWFRIDDSTV 245
              GS +Y L AV++H  V+   +SGHY+ +VK+    +W++ +D  +
Sbjct:   356 -GSFVYELSAVLIHRGVS--AYSGHYIAHVKDPQSGDWYKFNDEDI 398


>UNIPROTKB|H0YMI4 [details] [associations]
            symbol:USP3 "Ubiquitin carboxyl-terminal hydrolase"
            species:9606 "Homo sapiens" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0008270 "zinc ion binding"
            evidence=IEA] [GO:0008234 "cysteine-type peptidase activity"
            evidence=IEA] InterPro:IPR001394 InterPro:IPR001607
            InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271 GO:GO:0046872
            GO:GO:0008270 GO:GO:0008234 Gene3D:3.30.40.10 InterPro:IPR013083
            GO:GO:0006511 GO:GO:0004221 EMBL:AC118274 EMBL:AC007950
            HGNC:HGNC:12626 ChiTaRS:USP3 ProteinModelPortal:H0YMI4 SMR:H0YMI4
            Ensembl:ENST00000558285 Bgee:H0YMI4 Uniprot:H0YMI4
        Length = 503

 Score = 246 (91.7 bits), Expect = 2.8e-19, Sum P(2) = 2.8e-19
 Identities = 68/212 (32%), Positives = 107/212 (50%)

Query:    78 TTLIGLTFGGYLRSKIKCLKCLGKSELYERMMDLTVEI-------------DGDIGTLEE 124
             +T++   FGG L++++ CL C  +S  ++  +DL+++I             +G + +L +
Sbjct:   290 STVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRSKRSKNQENGPVCSLRD 349

Query:   125 ALAQFTASEILVGENKYYCSRCKSYEKAKKKLTVLEEPNILTIVLKRFESGNF--GKLNK 182
              L  FT  E L     Y C +CK  +K+ KK  + + P +L + LKRF    +   K++ 
Sbjct:   350 CLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDT 409

Query:   183 SVWFP-EVLNMAPYM---SRTGDGSPMYSLYAVVVHLDVTNATFSGHYVCYVKNSHE-EW 237
              V FP   L+M  Y+     +G  S +Y L AVVVH    +   SGHY  Y   +HE  W
Sbjct:   410 YVEFPLRGLDMKCYLLEPENSGPESCLYDLAAVVVHHG--SGVGSGHYTAYA--THEGRW 465

Query:   238 FRIDDSTVIPVKLERVLSEEAYMLLYARHSPR 269
             F  +DSTV     E V+  +AY+L Y  H  +
Sbjct:   466 FHFNDSTVTLTDEETVVKAKAYILFYVEHQAK 497

 Score = 51 (23.0 bits), Expect = 2.8e-19, Sum P(2) = 2.8e-19
 Identities = 11/33 (33%), Positives = 19/33 (57%)

Query:    26 SPIGILSKIQKIGSHLGHGREEDAHEFLRCAVD 58
             SP  +   + KI  +    +++DAHEF+R  +D
Sbjct:   221 SPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLD 253


>MGI|MGI:2144157 [details] [associations]
            symbol:Usp22 "ubiquitin specific peptidase 22" species:10090
            "Mus musculus" [GO:0000124 "SAGA complex" evidence=ISO] [GO:0003713
            "transcription coactivator activity" evidence=ISO] [GO:0004221
            "ubiquitin thiolesterase activity" evidence=IEA] [GO:0004843
            "ubiquitin-specific protease activity" evidence=ISO;IDA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IEA] [GO:0006508
            "proteolysis" evidence=IEA] [GO:0006511 "ubiquitin-dependent
            protein catabolic process" evidence=IC] [GO:0007049 "cell cycle"
            evidence=IEA] [GO:0008233 "peptidase activity" evidence=IEA]
            [GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
            [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016568 "chromatin
            modification" evidence=IEA] [GO:0016574 "histone ubiquitination"
            evidence=ISO] [GO:0016578 "histone deubiquitination" evidence=ISO]
            [GO:0016579 "protein deubiquitination" evidence=ISO;IDA]
            [GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030374
            "ligand-dependent nuclear receptor transcription coactivator
            activity" evidence=ISO] [GO:0043967 "histone H4 acetylation"
            evidence=ISO] [GO:0045893 "positive regulation of transcription,
            DNA-dependent" evidence=ISO] [GO:0045931 "positive regulation of
            mitotic cell cycle" evidence=ISO] [GO:0046872 "metal ion binding"
            evidence=IEA] InterPro:IPR001394 InterPro:IPR001607
            InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271 MGI:MGI:2144157
            GO:GO:0045893 GO:GO:0046872 GO:GO:0045931 GO:GO:0008270
            GO:GO:0006351 GO:GO:0007049 GO:GO:0000124 Gene3D:3.30.40.10
            InterPro:IPR013083 GO:GO:0006511 EMBL:AL646093 GO:GO:0030374
            GO:GO:0016578 GO:GO:0004843 GO:GO:0016579 GO:GO:0004221
            GO:GO:0016574 GO:GO:0010485 eggNOG:COG5533 KO:K11366
            GeneTree:ENSGT00690000101718 CTD:23326 HOVERGEN:HBG058014
            OrthoDB:EOG48PMJS MEROPS:C19.035 EMBL:AK084022 EMBL:AK220368
            EMBL:AK155071 EMBL:AK160992 EMBL:BC058419 EMBL:BC080737
            IPI:IPI00228479 RefSeq:NP_001004143.2 UniGene:Mm.30602
            ProteinModelPortal:Q5DU02 SMR:Q5DU02 STRING:Q5DU02
            PhosphoSite:Q5DU02 PRIDE:Q5DU02 Ensembl:ENSMUST00000041683
            GeneID:216825 KEGG:mmu:216825 UCSC:uc007jhc.2 InParanoid:Q3U2W4
            OMA:IHEHAKA NextBio:375358 Bgee:Q5DU02 CleanEx:MM_USP22
            Genevestigator:Q5DU02 GermOnline:ENSMUSG00000042506 Uniprot:Q5DU02
        Length = 525

 Score = 203 (76.5 bits), Expect = 3.1e-19, Sum P(2) = 3.1e-19
 Identities = 53/160 (33%), Positives = 81/160 (50%)

Query:   121 TLEEALAQFTASEILVGENKYYCSRCKSYEKAKKKLTVLEEPNILTIVLKRFE-SGNFG- 178
             TL + L +FT  E L    K  CS C SY+++ K+LT+ + P +    LKRFE S     
Sbjct:   361 TLTDCLRRFTRPEHLGSSAKIKCSGCHSYQESTKQLTMKKLPIVACFHLKRFEHSAKLRR 420

Query:   179 KLNKSVWFPEVLNMAPYMSRTGDG-------SPM--------YSLYAVVVHLDVTNATFS 223
             K+   V FP  L+M P+M+ + +         P+        YSL+AVV H        S
Sbjct:   421 KITTYVSFPLELDMTPFMASSKESRMNGQYQQPLDSLNNDNKYSLFAVVNHQGTLE---S 477

Query:   224 GHYVCYVKNSHEEWFRIDDSTVIPVKLERVLSEEAYMLLY 263
             GHY  +++   ++WF+ DD+ +    ++ VL  E Y+L Y
Sbjct:   478 GHYTSFIRQHKDQWFKCDDAIITKASIKDVLDSEGYLLFY 517

 Score = 100 (40.3 bits), Expect = 3.1e-19, Sum P(2) = 3.1e-19
 Identities = 27/96 (28%), Positives = 43/96 (44%)

Query:    24 PVSPIGILSKIQKIGSHLGHGREEDAHEFLRCAVDTMQSVCL-KEFGAKGKIAEETT-LI 81
             P  P  +L  +     HL    ++DAHEFL  A+D +   C   + G K         +I
Sbjct:   238 PHIPYKLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCKGDDNGKKANNPNHCNCII 297

Query:    82 GLTFGGYLRSKIKCLKCLGKSELYERMMDLTVEIDG 117
                F G L+S + C  C G S   +   D+++++ G
Sbjct:   298 DQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPG 333


>RGD|1310354 [details] [associations]
            symbol:Usp22 "ubiquitin specific peptidase 22" species:10116
            "Rattus norvegicus" [GO:0000124 "SAGA complex" evidence=IEA;ISO]
            [GO:0003713 "transcription coactivator activity" evidence=ISO]
            [GO:0004221 "ubiquitin thiolesterase activity" evidence=IEA]
            [GO:0004843 "ubiquitin-specific protease activity"
            evidence=IEA;ISO] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0008270 "zinc ion binding"
            evidence=IEA] [GO:0010485 "H4 histone acetyltransferase activity"
            evidence=IEA;ISO] [GO:0016574 "histone ubiquitination"
            evidence=IEA;ISO] [GO:0016578 "histone deubiquitination"
            evidence=IEA;ISO] [GO:0016579 "protein deubiquitination"
            evidence=ISO] [GO:0030374 "ligand-dependent nuclear receptor
            transcription coactivator activity" evidence=IEA;ISO] [GO:0043967
            "histone H4 acetylation" evidence=ISO] [GO:0045893 "positive
            regulation of transcription, DNA-dependent" evidence=IEA;ISO]
            [GO:0045931 "positive regulation of mitotic cell cycle"
            evidence=IEA;ISO] [GO:0070461 "SAGA-type complex" evidence=ISO]
            InterPro:IPR001394 InterPro:IPR001607 InterPro:IPR018200
            Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 PROSITE:PS50271 RGD:1310354 GO:GO:0045893
            GO:GO:0046872 GO:GO:0045931 GO:GO:0008270 GO:GO:0000124
            Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511 GO:GO:0030374
            GO:GO:0016578 GO:GO:0004843 GO:GO:0004221 GO:GO:0016574
            GO:GO:0010485 KO:K11366 GeneTree:ENSGT00690000101718 CTD:23326
            OrthoDB:EOG48PMJS OMA:IHEHAKA IPI:IPI00369544 RefSeq:NP_001178573.1
            UniGene:Rn.230625 Ensembl:ENSRNOT00000050061 GeneID:303201
            KEGG:rno:303201 UCSC:RGD:1310354 NextBio:650853 Uniprot:D3ZTX7
        Length = 525

 Score = 203 (76.5 bits), Expect = 3.1e-19, Sum P(2) = 3.1e-19
 Identities = 53/160 (33%), Positives = 81/160 (50%)

Query:   121 TLEEALAQFTASEILVGENKYYCSRCKSYEKAKKKLTVLEEPNILTIVLKRFE-SGNFG- 178
             TL + L +FT  E L    K  CS C SY+++ K+LT+ + P +    LKRFE S     
Sbjct:   361 TLTDCLRRFTRPEHLGSSAKIKCSGCHSYQESTKQLTMKKLPIVACFHLKRFEHSAKLRR 420

Query:   179 KLNKSVWFPEVLNMAPYMSRTGDG-------SPM--------YSLYAVVVHLDVTNATFS 223
             K+   V FP  L+M P+M+ + +         P+        YSL+AVV H        S
Sbjct:   421 KITTYVSFPLELDMTPFMASSKESRMNGQYQQPLDSLNNDNKYSLFAVVNHQGTLE---S 477

Query:   224 GHYVCYVKNSHEEWFRIDDSTVIPVKLERVLSEEAYMLLY 263
             GHY  +++   ++WF+ DD+ +    ++ VL  E Y+L Y
Sbjct:   478 GHYTSFIRQHKDQWFKCDDAIITKASIKDVLDSEGYLLFY 517

 Score = 100 (40.3 bits), Expect = 3.1e-19, Sum P(2) = 3.1e-19
 Identities = 27/96 (28%), Positives = 43/96 (44%)

Query:    24 PVSPIGILSKIQKIGSHLGHGREEDAHEFLRCAVDTMQSVCL-KEFGAKGKIAEETT-LI 81
             P  P  +L  +     HL    ++DAHEFL  A+D +   C   + G K         +I
Sbjct:   238 PHIPYKLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCKGDDNGKKANNPNHCNCII 297

Query:    82 GLTFGGYLRSKIKCLKCLGKSELYERMMDLTVEIDG 117
                F G L+S + C  C G S   +   D+++++ G
Sbjct:   298 DQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPG 333


>UNIPROTKB|A5D9H7 [details] [associations]
            symbol:USP12 "Ubiquitin carboxyl-terminal hydrolase 12"
            species:9913 "Bos taurus" [GO:0004843 "ubiquitin-specific protease
            activity" evidence=ISS] [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=ISS] [GO:0004197 "cysteine-type endopeptidase
            activity" evidence=ISS] [GO:0016579 "protein deubiquitination"
            evidence=ISS] [GO:0006511 "ubiquitin-dependent protein catabolic
            process" evidence=IEA] InterPro:IPR001394 InterPro:IPR018200
            Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235
            GO:GO:0006511 GO:GO:0004197 GO:GO:0004843 GO:GO:0016579
            GO:GO:0004221 eggNOG:COG5077 KO:K11842 EMBL:BT030596
            IPI:IPI00852466 RefSeq:NP_001091528.1 UniGene:Bt.24513
            Ensembl:ENSBTAT00000022828 GeneID:525655 KEGG:bta:525655 CTD:219333
            GeneTree:ENSGT00650000093027 HOGENOM:HOG000231498 InParanoid:A5D9H7
            OMA:SKFASFC OrthoDB:EOG42Z4Q8 NextBio:20874210 ArrayExpress:A5D9H7
            Uniprot:A5D9H7
        Length = 369

 Score = 249 (92.7 bits), Expect = 3.3e-19, P = 3.3e-19
 Identities = 79/258 (30%), Positives = 127/258 (49%)

Query:    25 VSPIGILSKIQKIGSHLGHGREEDAHEFLRCAVDTMQSVCL------KEFGA--KGKIAE 76
             + P   +++++K      +  ++DAHEFL   ++T+  +        K+ G    G I  
Sbjct:   101 IPPKKFITRLRKENELFDNYMQQDAHEFLNYLLNTIADILQEERKQEKQNGRLPNGNIDS 160

Query:    77 ET------TLIGLTFGGYLRSKIKCLKCLGKSELYERMMDLTVEIDGDIGTLEEALAQFT 130
             E       T +   F G L ++ +CL C   S   E  +DL+V+++ +  ++   L  F+
Sbjct:   161 ENNSTPDPTWVHEIFQGTLTNETRCLTCETISSKDEDFLDLSVDVEQNT-SITHCLRGFS 219

Query:   131 ASEILVGENKYYCSRCKSYEKAKKKLTVLEEPNILTIVLKRF----ESGNFGKLNKSVWF 186
              +E L  E KYYC  C+S ++A K++ V + P IL + LKRF    +   + KL+  V F
Sbjct:   220 NTETLCSEYKYYCEECRSKQEAHKRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVF 279

Query:   187 PEVLNMAPYMSRTGDGS-P--MYSLYAVVVHLDVTNATFSGHYVCYVKNSHEEWFRIDDS 243
             P  L +    + +GD + P  MY L AVVVH    +    GHY+  VK SH+ W   DD 
Sbjct:   280 PLELRL---FNTSGDATNPDRMYDLVAVVVHCG--SGPNRGHYIAIVK-SHDFWLLFDDD 333

Query:   244 TVIPVKLERVLSEEAYML 261
              V  +  + +  EE Y L
Sbjct:   334 IVEKIDAQAI--EEFYGL 349


>UNIPROTKB|Q9Y6I4 [details] [associations]
            symbol:USP3 "Ubiquitin carboxyl-terminal hydrolase 3"
            species:9606 "Homo sapiens" [GO:0006511 "ubiquitin-dependent
            protein catabolic process" evidence=IEA] [GO:0008270 "zinc ion
            binding" evidence=IEA] [GO:0042393 "histone binding" evidence=IPI]
            [GO:0016578 "histone deubiquitination" evidence=IDA] [GO:0031647
            "regulation of protein stability" evidence=IDA] [GO:0004221
            "ubiquitin thiolesterase activity" evidence=IMP] [GO:0000790
            "nuclear chromatin" evidence=IDA] [GO:0000278 "mitotic cell cycle"
            evidence=IMP] [GO:0006281 "DNA repair" evidence=IMP] [GO:0004843
            "ubiquitin-specific protease activity" evidence=TAS]
            InterPro:IPR001394 InterPro:IPR001607 InterPro:IPR018200
            Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 PROSITE:PS50271 GO:GO:0046872 GO:GO:0008270
            GO:GO:0006281 GO:GO:0031647 GO:GO:0000790 Gene3D:3.30.40.10
            InterPro:IPR013083 GO:GO:0006511 EMBL:CH471082 GO:GO:0016578
            GO:GO:0004843 GO:GO:0004221 GO:GO:0000278 eggNOG:COG5533
            EMBL:AC118274 HOGENOM:HOG000231498 EMBL:AF073344 EMBL:BT007269
            EMBL:AK301236 EMBL:AC007950 EMBL:BC018113 EMBL:BC065300
            EMBL:BC107137 EMBL:BC107138 IPI:IPI00002330 IPI:IPI01008797
            RefSeq:NP_001243631.1 RefSeq:NP_006528.2 UniGene:Hs.458499
            ProteinModelPortal:Q9Y6I4 SMR:Q9Y6I4 IntAct:Q9Y6I4 STRING:Q9Y6I4
            MEROPS:C19.026 PhosphoSite:Q9Y6I4 PaxDb:Q9Y6I4 PRIDE:Q9Y6I4
            DNASU:9960 Ensembl:ENST00000380324 Ensembl:ENST00000540797
            GeneID:9960 KEGG:hsa:9960 UCSC:uc002amf.3 CTD:9960
            GeneCards:GC15P063796 H-InvDB:HIX0012328 HGNC:HGNC:12626 MIM:604728
            neXtProt:NX_Q9Y6I4 PharmGKB:PA37251 HOVERGEN:HBG103589
            InParanoid:Q9Y6I4 KO:K11986 OMA:DCLRSFT OrthoDB:EOG4G4GQC
            ChiTaRS:USP3 GenomeRNAi:9960 NextBio:37582 ArrayExpress:Q9Y6I4
            Bgee:Q9Y6I4 CleanEx:HS_USP3 Genevestigator:Q9Y6I4
            GermOnline:ENSG00000140455 Uniprot:Q9Y6I4
        Length = 520

 Score = 246 (91.7 bits), Expect = 3.4e-19, Sum P(2) = 3.4e-19
 Identities = 68/212 (32%), Positives = 107/212 (50%)

Query:    78 TTLIGLTFGGYLRSKIKCLKCLGKSELYERMMDLTVEI-------------DGDIGTLEE 124
             +T++   FGG L++++ CL C  +S  ++  +DL+++I             +G + +L +
Sbjct:   307 STVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRSKRSKNQENGPVCSLRD 366

Query:   125 ALAQFTASEILVGENKYYCSRCKSYEKAKKKLTVLEEPNILTIVLKRFESGNF--GKLNK 182
              L  FT  E L     Y C +CK  +K+ KK  + + P +L + LKRF    +   K++ 
Sbjct:   367 CLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDT 426

Query:   183 SVWFP-EVLNMAPYM---SRTGDGSPMYSLYAVVVHLDVTNATFSGHYVCYVKNSHE-EW 237
              V FP   L+M  Y+     +G  S +Y L AVVVH    +   SGHY  Y   +HE  W
Sbjct:   427 YVEFPLRGLDMKCYLLEPENSGPESCLYDLAAVVVHHG--SGVGSGHYTAYA--THEGRW 482

Query:   238 FRIDDSTVIPVKLERVLSEEAYMLLYARHSPR 269
             F  +DSTV     E V+  +AY+L Y  H  +
Sbjct:   483 FHFNDSTVTLTDEETVVKAKAYILFYVEHQAK 514

 Score = 51 (23.0 bits), Expect = 3.4e-19, Sum P(2) = 3.4e-19
 Identities = 11/33 (33%), Positives = 19/33 (57%)

Query:    26 SPIGILSKIQKIGSHLGHGREEDAHEFLRCAVD 58
             SP  +   + KI  +    +++DAHEF+R  +D
Sbjct:   238 SPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLD 270


>UNIPROTKB|Q52KZ6 [details] [associations]
            symbol:usp12-a "Ubiquitin carboxyl-terminal hydrolase 12-A"
            species:8355 "Xenopus laevis" [GO:0004197 "cysteine-type
            endopeptidase activity" evidence=ISS] [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=ISS] [GO:0004843
            "ubiquitin-specific protease activity" evidence=ISS] [GO:0016579
            "protein deubiquitination" evidence=ISS] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 GO:GO:0006511 GO:GO:0004197 GO:GO:0004843
            GO:GO:0016579 GO:GO:0004221 HSSP:Q93009 EMBL:BC094130
            RefSeq:NP_001089397.1 UniGene:Xl.52535 GeneID:734447
            KEGG:xla:734447 CTD:734447 Xenbase:XB-GENE-1009335 KO:K11842
            Uniprot:Q52KZ6
        Length = 370

 Score = 249 (92.7 bits), Expect = 3.4e-19, P = 3.4e-19
 Identities = 78/259 (30%), Positives = 129/259 (49%)

Query:    25 VSPIGILSKIQKIGSHLGHGREEDAHEFLRCAVDTMQSVCLKEFGAK---GKI------- 74
             + P   +++++K      +  ++DAHEFL   ++T+  +  +E   +   G+I       
Sbjct:   101 IPPKKFITRLRKENELFDNYMQQDAHEFLNYLLNTIADILQEERKQEKQNGRIPNGNIDN 160

Query:    75 -----AEETTLIGLTFGGYLRSKIKCLKCLGKSELYERMMDLTVEIDGDIGTLEEALAQF 129
                  A + T +   F G L ++ +CL C   S   E  +DL+V+++ +  ++   L  F
Sbjct:   161 ENNNSAPDPTWVHEIFQGTLTNETRCLTCETISSKDEDFLDLSVDVEQNT-SITHCLRGF 219

Query:   130 TASEILVGENKYYCSRCKSYEKAKKKLTVLEEPNILTIVLKRF----ESGNFGKLNKSVW 185
             + +E L  E KYYC  C+S ++A K++ V + P IL + LKRF    +   + KL+  V 
Sbjct:   220 SNTETLCSEYKYYCEECRSKQEAHKRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVV 279

Query:   186 FPEVLNMAPYMSRTGDGS-P--MYSLYAVVVHLDVTNATFSGHYVCYVKNSHEEWFRIDD 242
             FP  L +    + +GD + P  MY L AVVVH    +    GHY+  VK SH+ W   DD
Sbjct:   280 FPLELRL---FNTSGDATNPDRMYDLVAVVVHCG--SGPNRGHYIAIVK-SHDFWLLFDD 333

Query:   243 STVIPVKLERVLSEEAYML 261
               V  +  + +  EE Y L
Sbjct:   334 DIVEKIDAQAI--EEFYGL 350


>UNIPROTKB|F1P2L3 [details] [associations]
            symbol:USP12 "Ubiquitin carboxyl-terminal hydrolase"
            species:9031 "Gallus gallus" [GO:0006511 "ubiquitin-dependent
            protein catabolic process" evidence=IEA] [GO:0004197 "cysteine-type
            endopeptidase activity" evidence=IEA] [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] [GO:0004843
            "ubiquitin-specific protease activity" evidence=IEA] [GO:0016579
            "protein deubiquitination" evidence=IEA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 GO:GO:0006511 GO:GO:0004197 GO:GO:0004843
            GO:GO:0016579 GO:GO:0004221 GeneTree:ENSGT00650000093027
            OMA:SKFASFC EMBL:AADN02005175 IPI:IPI00593873
            Ensembl:ENSGALT00000027624 Uniprot:F1P2L3
        Length = 375

 Score = 249 (92.7 bits), Expect = 3.9e-19, P = 3.9e-19
 Identities = 79/258 (30%), Positives = 127/258 (49%)

Query:    25 VSPIGILSKIQKIGSHLGHGREEDAHEFLRCAVDTMQSVCL------KEFGA--KGKIAE 76
             + P   +++++K      +  ++DAHEFL   ++T+  +        K+ G    G I  
Sbjct:   107 IPPKKFITRLRKENELFDNYMQQDAHEFLNYLLNTIADILQEERKQEKQNGRLPNGNIDN 166

Query:    77 ET------TLIGLTFGGYLRSKIKCLKCLGKSELYERMMDLTVEIDGDIGTLEEALAQFT 130
             E       T +   F G L ++ +CL C   S   E  +DL+V+++ +  ++   L  F+
Sbjct:   167 ENNSPPDPTWVHEIFQGTLTNETRCLTCETISSKDEDFLDLSVDVEQNT-SITHCLRGFS 225

Query:   131 ASEILVGENKYYCSRCKSYEKAKKKLTVLEEPNILTIVLKRF----ESGNFGKLNKSVWF 186
              +E L  E KYYC  C+S ++A K++ V + P IL + LKRF    +   + KL+  V F
Sbjct:   226 NTETLCSEYKYYCEECRSKQEAHKRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVF 285

Query:   187 PEVLNMAPYMSRTGDGS-P--MYSLYAVVVHLDVTNATFSGHYVCYVKNSHEEWFRIDDS 243
             P  L +    + +GD + P  MY L AVVVH    +    GHY+  VK SH+ W   DD 
Sbjct:   286 PLELRL---FNTSGDATNPDRMYDLVAVVVHCG--SGPNRGHYIAIVK-SHDFWLLFDDD 339

Query:   244 TVIPVKLERVLSEEAYML 261
              V  +  + +  EE Y L
Sbjct:   340 IVEKIDAQAI--EEFYGL 355


>UNIPROTKB|F1NG36 [details] [associations]
            symbol:USP22 "Ubiquitin carboxyl-terminal hydrolase"
            species:9031 "Gallus gallus" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0008270 "zinc ion binding"
            evidence=IEA] [GO:0008234 "cysteine-type peptidase activity"
            evidence=IEA] InterPro:IPR001394 InterPro:IPR001607
            InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271 GO:GO:0046872
            GO:GO:0008270 GO:GO:0008234 Gene3D:3.30.40.10 InterPro:IPR013083
            GO:GO:0006511 GO:GO:0004221 GeneTree:ENSGT00690000101718
            OMA:IHEHAKA EMBL:AADN02023754 EMBL:AADN02023755 IPI:IPI00596070
            Ensembl:ENSGALT00000007615 Uniprot:F1NG36
        Length = 483

 Score = 200 (75.5 bits), Expect = 4.8e-19, Sum P(2) = 4.8e-19
 Identities = 53/160 (33%), Positives = 80/160 (50%)

Query:   121 TLEEALAQFTASEILVGENKYYCSRCKSYEKAKKKLTVLEEPNILTIVLKRFE-SGNFG- 178
             TL + L +FT  E L    K  CS C SY+++ K+LT+ + P +    LKRFE S     
Sbjct:   319 TLTDCLRRFTRPEHLGSSAKIKCSGCHSYQESTKQLTMKKLPIVACFHLKRFEHSAKLRR 378

Query:   179 KLNKSVWFPEVLNMAPYMSRTGDG-------SPM--------YSLYAVVVHLDVTNATFS 223
             K+   V FP  L+M P+M+ + +         P         YSL+AVV H        S
Sbjct:   379 KITTYVSFPLELDMTPFMASSKESRMNGQYQQPTDSLNNDNKYSLFAVVNHQGTLE---S 435

Query:   224 GHYVCYVKNSHEEWFRIDDSTVIPVKLERVLSEEAYMLLY 263
             GHY  +++   ++WF+ DD+ +    ++ VL  E Y+L Y
Sbjct:   436 GHYTSFIRQHKDQWFKCDDAIITKASIKDVLDSEGYLLFY 475

 Score = 100 (40.3 bits), Expect = 4.8e-19, Sum P(2) = 4.8e-19
 Identities = 27/96 (28%), Positives = 43/96 (44%)

Query:    24 PVSPIGILSKIQKIGSHLGHGREEDAHEFLRCAVDTMQSVCL-KEFGAKGKIAEETT-LI 81
             P  P  +L  +     HL    ++DAHEFL  A+D +   C   + G K         +I
Sbjct:   196 PHIPYRLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCKGDDNGKKANNPNHCNCII 255

Query:    82 GLTFGGYLRSKIKCLKCLGKSELYERMMDLTVEIDG 117
                F G L+S + C  C G S   +   D+++++ G
Sbjct:   256 DQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPG 291


>UNIPROTKB|F1RTK0 [details] [associations]
            symbol:USP12 "Ubiquitin carboxyl-terminal hydrolase"
            species:9823 "Sus scrofa" [GO:0016579 "protein deubiquitination"
            evidence=IEA] [GO:0004843 "ubiquitin-specific protease activity"
            evidence=IEA] [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=IEA] [GO:0004197 "cysteine-type endopeptidase activity"
            evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
            process" evidence=IEA] InterPro:IPR001394 InterPro:IPR018200
            Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235
            GO:GO:0006511 GO:GO:0004197 GO:GO:0004843 GO:GO:0016579
            GO:GO:0004221 GeneTree:ENSGT00650000093027 OMA:SKFASFC
            EMBL:CU062619 Ensembl:ENSSSCT00000010190 Uniprot:F1RTK0
        Length = 374

 Score = 248 (92.4 bits), Expect = 5.1e-19, P = 5.1e-19
 Identities = 79/259 (30%), Positives = 127/259 (49%)

Query:    25 VSPIGILSKIQKIGSHLGHGREEDAHEFLRCAVDTMQSVCL------KEFGA--KGKIAE 76
             + P   +++++K      +  ++DAHEFL   ++T+  +        K+ G    G I  
Sbjct:   105 IPPKKFITRLRKENELFDNYMQQDAHEFLNYLLNTIADILQEERKQEKQNGRLPNGNIDT 164

Query:    77 ET-------TLIGLTFGGYLRSKIKCLKCLGKSELYERMMDLTVEIDGDIGTLEEALAQF 129
             E        T +   F G L ++ +CL C   S   E  +DL+V+++ +  ++   L  F
Sbjct:   165 ENNHSTPDPTWVHEIFQGTLTNETRCLTCETISSKDEDFLDLSVDVEQNT-SITHCLRGF 223

Query:   130 TASEILVGENKYYCSRCKSYEKAKKKLTVLEEPNILTIVLKRF----ESGNFGKLNKSVW 185
             + +E L  E KYYC  C+S ++A K++ V + P IL + LKRF    +   + KL+  V 
Sbjct:   224 SNTETLCSEYKYYCEECRSKQEAHKRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVV 283

Query:   186 FPEVLNMAPYMSRTGDGS-P--MYSLYAVVVHLDVTNATFSGHYVCYVKNSHEEWFRIDD 242
             FP  L +    + +GD + P  MY L AVVVH    +    GHY+  VK SH+ W   DD
Sbjct:   284 FPLELRL---FNTSGDATNPDRMYDLVAVVVHCG--SGPHRGHYIAIVK-SHDFWLLFDD 337

Query:   243 STVIPVKLERVLSEEAYML 261
               V  +  + +  EE Y L
Sbjct:   338 DIVEKIDAQAI--EEFYGL 354


>UNIPROTKB|O75317 [details] [associations]
            symbol:USP12 "Ubiquitin carboxyl-terminal hydrolase 12"
            species:9606 "Homo sapiens" [GO:0006511 "ubiquitin-dependent
            protein catabolic process" evidence=IEA] [GO:0006464 "cellular
            protein modification process" evidence=NAS] [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IDA;TAS] [GO:0005515 "protein
            binding" evidence=IPI] [GO:0005575 "cellular_component"
            evidence=ND] [GO:0016579 "protein deubiquitination" evidence=IDA]
            [GO:0004197 "cysteine-type endopeptidase activity" evidence=IMP]
            [GO:0004843 "ubiquitin-specific protease activity" evidence=IDA]
            InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 EMBL:CH471075 GO:GO:0006511
            GO:GO:0004197 GO:GO:0004843 GO:GO:0016579 GO:GO:0004221
            eggNOG:COG5077 KO:K11842 CTD:219333 HOGENOM:HOG000231498
            OMA:SKFASFC OrthoDB:EOG42Z4Q8 EMBL:AF022789 EMBL:AK289685
            EMBL:AL158062 EMBL:AL355473 EMBL:BC026072 IPI:IPI00290893
            RefSeq:NP_872294.2 UniGene:Hs.42400 ProteinModelPortal:O75317
            SMR:O75317 IntAct:O75317 STRING:O75317 MEROPS:C19.020
            PhosphoSite:O75317 PaxDb:O75317 PRIDE:O75317
            Ensembl:ENST00000282344 GeneID:219333 KEGG:hsa:219333
            UCSC:uc001uqy.3 GeneCards:GC13M027640 HGNC:HGNC:20485 HPA:HPA007288
            MIM:603091 neXtProt:NX_O75317 PharmGKB:PA37236 HOVERGEN:HBG054038
            InParanoid:O75317 GenomeRNAi:219333 NextBio:90574 Bgee:O75317
            CleanEx:HS_USP12 Genevestigator:O75317 GermOnline:ENSG00000152484
            Uniprot:O75317
        Length = 370

 Score = 247 (92.0 bits), Expect = 6.2e-19, P = 6.2e-19
 Identities = 79/259 (30%), Positives = 127/259 (49%)

Query:    25 VSPIGILSKIQKIGSHLGHGREEDAHEFLRCAVDTMQSVCL------KEFGA--KGKIAE 76
             + P   +++++K      +  ++DAHEFL   ++T+  +        K+ G    G I  
Sbjct:   101 IPPKKFITRLRKENELFDNYMQQDAHEFLNYLLNTIADILQEERKQEKQNGRLPNGNIDN 160

Query:    77 ET-------TLIGLTFGGYLRSKIKCLKCLGKSELYERMMDLTVEIDGDIGTLEEALAQF 129
             E        T +   F G L ++ +CL C   S   E  +DL+V+++ +  ++   L  F
Sbjct:   161 ENNNSTPDPTWVHEIFQGTLTNETRCLTCETISSKDEDFLDLSVDVEQNT-SITHCLRGF 219

Query:   130 TASEILVGENKYYCSRCKSYEKAKKKLTVLEEPNILTIVLKRF----ESGNFGKLNKSVW 185
             + +E L  E KYYC  C+S ++A K++ V + P IL + LKRF    +   + KL+  V 
Sbjct:   220 SNTETLCSEYKYYCEECRSKQEAHKRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVV 279

Query:   186 FPEVLNMAPYMSRTGDGS-P--MYSLYAVVVHLDVTNATFSGHYVCYVKNSHEEWFRIDD 242
             FP  L +    + +GD + P  MY L AVVVH    +    GHY+  VK SH+ W   DD
Sbjct:   280 FPLELRL---FNTSGDATNPDRMYDLVAVVVHCG--SGPNRGHYIAIVK-SHDFWLLFDD 333

Query:   243 STVIPVKLERVLSEEAYML 261
               V  +  + +  EE Y L
Sbjct:   334 DIVEKIDAQAI--EEFYGL 350


>UNIPROTKB|Q5M981 [details] [associations]
            symbol:usp12-b "Ubiquitin carboxyl-terminal hydrolase 12-B"
            species:8355 "Xenopus laevis" [GO:0004197 "cysteine-type
            endopeptidase activity" evidence=ISS] [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=ISS] [GO:0004843
            "ubiquitin-specific protease activity" evidence=ISS] [GO:0016579
            "protein deubiquitination" evidence=ISS] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 GO:GO:0006511 GO:GO:0004197 GO:GO:0004843
            GO:GO:0016579 GO:GO:0004221 HSSP:Q93009 EMBL:BC087530
            UniGene:Xl.49982 Xenbase:XB-GENE-6252498 Uniprot:Q5M981
        Length = 370

 Score = 247 (92.0 bits), Expect = 6.2e-19, P = 6.2e-19
 Identities = 79/259 (30%), Positives = 127/259 (49%)

Query:    25 VSPIGILSKIQKIGSHLGHGREEDAHEFLRCAVDTMQSVCL------KEFGA--KGKIAE 76
             + P   +++++K      +  ++DAHEFL   ++T+  +        K+ G    G I  
Sbjct:   101 IPPKKFITRLRKENELFDNYMQQDAHEFLNYLLNTIADILQEERKQEKQNGRIPNGNIDN 160

Query:    77 ET-------TLIGLTFGGYLRSKIKCLKCLGKSELYERMMDLTVEIDGDIGTLEEALAQF 129
             E        T +   F G L ++ +CL C   S   E  +DL+V+++ +  ++   L  F
Sbjct:   161 ENNNNTPDPTWVHEIFQGTLTNETRCLTCETISSKDEDFLDLSVDVEQNT-SITHCLRGF 219

Query:   130 TASEILVGENKYYCSRCKSYEKAKKKLTVLEEPNILTIVLKRF----ESGNFGKLNKSVW 185
             + +E L  E KYYC  C+S ++A K++ V + P IL + LKRF    +   + KL+  V 
Sbjct:   220 SNTETLCSEYKYYCEECRSKQEAHKRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVV 279

Query:   186 FPEVLNMAPYMSRTGDGS-P--MYSLYAVVVHLDVTNATFSGHYVCYVKNSHEEWFRIDD 242
             FP  L +    + +GD + P  MY L AVVVH    +    GHY+  VK SH+ W   DD
Sbjct:   280 FPLELRL---FNTSGDATNPDRMYDLVAVVVHCG--SGPNRGHYIAIVK-SHDFWLLFDD 333

Query:   243 STVIPVKLERVLSEEAYML 261
               V  +  + +  EE Y L
Sbjct:   334 DIVEKIDAQAI--EEFYGL 350


>UNIPROTKB|Q9UPT9 [details] [associations]
            symbol:USP22 "Ubiquitin carboxyl-terminal hydrolase 22"
            species:9606 "Homo sapiens" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0008270 "zinc ion binding"
            evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0003713
            "transcription coactivator activity" evidence=IDA] [GO:0030374
            "ligand-dependent nuclear receptor transcription coactivator
            activity" evidence=IMP] [GO:0000124 "SAGA complex" evidence=IDA]
            [GO:0005515 "protein binding" evidence=IPI] [GO:0045893 "positive
            regulation of transcription, DNA-dependent" evidence=IMP]
            [GO:0004843 "ubiquitin-specific protease activity"
            evidence=IMP;IDA] [GO:0009790 "embryo development" evidence=NAS]
            [GO:0016579 "protein deubiquitination" evidence=IDA] [GO:0016574
            "histone ubiquitination" evidence=IDA] [GO:0016578 "histone
            deubiquitination" evidence=IDA] [GO:0045931 "positive regulation of
            mitotic cell cycle" evidence=IMP] [GO:0010485 "H4 histone
            acetyltransferase activity" evidence=IDA] [GO:0070461 "SAGA-type
            complex" evidence=IDA] [GO:0043967 "histone H4 acetylation"
            evidence=IDA] InterPro:IPR001394 InterPro:IPR001607
            InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271 GO:GO:0045893
            GO:GO:0046872 GO:GO:0045931 GO:GO:0008270 GO:GO:0006351
            GO:GO:0009790 GO:GO:0007049 GO:GO:0043967 GO:GO:0000124
            Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511 GO:GO:0030374
            GO:GO:0016578 GO:GO:0004843 GO:GO:0004221 GO:GO:0016574
            eggNOG:COG5533 KO:K11366 HOGENOM:HOG000007260 CTD:23326
            HOVERGEN:HBG058014 OrthoDB:EOG48PMJS MEROPS:C19.035 EMBL:AB028986
            EMBL:BC007196 EMBL:BC025317 EMBL:BC110499 EMBL:BC126898
            EMBL:BX640815 IPI:IPI00852960 IPI:IPI00923593 RefSeq:NP_056091.1
            UniGene:Hs.462492 ProteinModelPortal:Q9UPT9 SMR:Q9UPT9
            IntAct:Q9UPT9 MINT:MINT-1390273 STRING:Q9UPT9 PhosphoSite:Q9UPT9
            DMDM:78103328 PaxDb:Q9UPT9 PRIDE:Q9UPT9 Ensembl:ENST00000261497
            Ensembl:ENST00000537526 GeneID:23326 KEGG:hsa:23326 UCSC:uc002gyl.4
            UCSC:uc002gyn.4 GeneCards:GC17M020902 HGNC:HGNC:12621 HPA:HPA044980
            MIM:612116 neXtProt:NX_Q9UPT9 PharmGKB:PA37247 InParanoid:Q9UPT9
            ChiTaRS:USP22 GenomeRNAi:23326 NextBio:45232 ArrayExpress:Q9UPT9
            Bgee:Q9UPT9 CleanEx:HS_USP22 Genevestigator:Q9UPT9
            GermOnline:ENSG00000124422 Uniprot:Q9UPT9
        Length = 525

 Score = 200 (75.5 bits), Expect = 6.9e-19, Sum P(2) = 6.9e-19
 Identities = 53/160 (33%), Positives = 80/160 (50%)

Query:   121 TLEEALAQFTASEILVGENKYYCSRCKSYEKAKKKLTVLEEPNILTIVLKRFE-SGNFG- 178
             TL + L +FT  E L    K  CS C SY+++ K+LT+ + P +    LKRFE S     
Sbjct:   361 TLTDCLRRFTRPEHLGSSAKIKCSGCHSYQESTKQLTMKKLPIVACFHLKRFEHSAKLRR 420

Query:   179 KLNKSVWFPEVLNMAPYMSRTGDG-------SPM--------YSLYAVVVHLDVTNATFS 223
             K+   V FP  L+M P+M+ + +         P         YSL+AVV H        S
Sbjct:   421 KITTYVSFPLELDMTPFMASSKESRMNGQYQQPTDSLNNDNKYSLFAVVNHQGTLE---S 477

Query:   224 GHYVCYVKNSHEEWFRIDDSTVIPVKLERVLSEEAYMLLY 263
             GHY  +++   ++WF+ DD+ +    ++ VL  E Y+L Y
Sbjct:   478 GHYTSFIRQHKDQWFKCDDAIITKASIKDVLDSEGYLLFY 517

 Score = 100 (40.3 bits), Expect = 6.9e-19, Sum P(2) = 6.9e-19
 Identities = 27/96 (28%), Positives = 43/96 (44%)

Query:    24 PVSPIGILSKIQKIGSHLGHGREEDAHEFLRCAVDTMQSVCL-KEFGAKGKIAEETT-LI 81
             P  P  +L  +     HL    ++DAHEFL  A+D +   C   + G K         +I
Sbjct:   238 PHIPYKLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCKGDDNGKKANNPNHCNCII 297

Query:    82 GLTFGGYLRSKIKCLKCLGKSELYERMMDLTVEIDG 117
                F G L+S + C  C G S   +   D+++++ G
Sbjct:   298 DQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPG 333


>MGI|MGI:1858178 [details] [associations]
            symbol:Usp2 "ubiquitin specific peptidase 2" species:10090
            "Mus musculus" [GO:0000122 "negative regulation of transcription
            from RNA polymerase II promoter" evidence=ISO] [GO:0004221
            "ubiquitin thiolesterase activity" evidence=ISO] [GO:0005634
            "nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IDA]
            [GO:0005813 "centrosome" evidence=ISO] [GO:0005938 "cell cortex"
            evidence=IDA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA]
            [GO:0007049 "cell cycle" evidence=IEA] [GO:0007517 "muscle organ
            development" evidence=IEA] [GO:0008233 "peptidase activity"
            evidence=IEA] [GO:0008234 "cysteine-type peptidase activity"
            evidence=IEA] [GO:0016579 "protein deubiquitination" evidence=ISO]
            [GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030332 "cyclin
            binding" evidence=ISO] [GO:0031625 "ubiquitin protein ligase
            binding" evidence=ISO] [GO:0042802 "identical protein binding"
            evidence=IDA] [GO:0045931 "positive regulation of mitotic cell
            cycle" evidence=ISO] [GO:0046872 "metal ion binding" evidence=IEA]
            [GO:0048471 "perinuclear region of cytoplasm" evidence=ISO;IDA]
            [GO:0048642 "negative regulation of skeletal muscle tissue
            development" evidence=ISO] [GO:0048643 "positive regulation of
            skeletal muscle tissue development" evidence=ISO] [GO:0050821
            "protein stabilization" evidence=ISO] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 MGI:MGI:1858178 GO:GO:0005938 GO:GO:0005634
            GO:GO:0005813 GO:GO:0048471 GO:GO:0050821 GO:GO:0046872
            GO:GO:0045931 GO:GO:0008234 GO:GO:0000122 GO:GO:0007049
            GO:GO:0042802 GO:GO:0007517 GO:GO:0006511 GO:GO:0016579
            GO:GO:0004221 GO:GO:0048643 eggNOG:COG5533 GO:GO:0048642
            HOGENOM:HOG000231498 HOVERGEN:HBG011164 KO:K11833
            GeneTree:ENSGT00670000098024 MEROPS:C19.013 CTD:9099
            OrthoDB:EOG47M1XH OMA:SASHRSY EMBL:AY255637 EMBL:AY255638
            EMBL:AY255639 EMBL:AY255640 EMBL:AB041799 EMBL:AK138799
            EMBL:BC017517 EMBL:AF079565 IPI:IPI00377286 IPI:IPI00409197
            IPI:IPI00785316 IPI:IPI00785464 RefSeq:NP_058088.2
            RefSeq:NP_932759.1 RefSeq:NP_932760.2 UniGene:Mm.272770
            ProteinModelPortal:O88623 SMR:O88623 STRING:O88623
            PhosphoSite:O88623 PRIDE:O88623 Ensembl:ENSMUST00000034508
            Ensembl:ENSMUST00000065461 Ensembl:ENSMUST00000114830
            Ensembl:ENSMUST00000176416 Ensembl:ENSMUST00000177054 GeneID:53376
            KEGG:mmu:53376 UCSC:uc009pbn.1 UCSC:uc009pbp.1 UCSC:uc012grp.1
            InParanoid:O88623 NextBio:310185 Bgee:O88623 CleanEx:MM_USP2
            Genevestigator:O88623 GermOnline:ENSMUSG00000032010 Uniprot:O88623
        Length = 613

 Score = 240 (89.5 bits), Expect = 7.1e-19, Sum P(2) = 7.1e-19
 Identities = 66/203 (32%), Positives = 104/203 (51%)

Query:    74 IAEETTLIGLTFGGYLRSKIKCLKCLGKSELYERMMDLTVEID--G--DIGTLEEALAQF 129
             +  E + IG  F G L+S + C  C   S +++   DL++ I   G  ++ TL + +  F
Sbjct:   412 LEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEV-TLMDCMRLF 470

Query:   130 TASEILVGENKYYCSRCKSYEKAKKKLTVLEEPNILTIVLKRFESGNF--GKLNKSVWFP 187
             T  +IL G+ K  C RC++ ++  KK +V   P IL + LKRF        KL   V FP
Sbjct:   471 TKEDILDGDEKPTCCRCRARKRCIKKFSVQRFPKILVLHLKRFSESRIRTSKLTTFVNFP 530

Query:   188 -EVLNMAPYMSRTGDGSPMYSLYAVVVHLDVTNATFSGHYVCYVKNSHE-EWFRIDDSTV 245
                L++  + S   + + +Y+LYAV  H   +  T  GHY  Y ++    EW   +DS+V
Sbjct:   531 LRDLDLREFASENTNHA-VYNLYAVSNH---SGTTMGGHYTAYCRSPVTGEWHTFNDSSV 586

Query:   246 IPVKLERVLSEEAYMLLYARHSP 268
              P+   +V + +AY+L Y   SP
Sbjct:   587 TPMSSSQVRTSDAYLLFYELASP 609

 Score = 58 (25.5 bits), Expect = 7.1e-19, Sum P(2) = 7.1e-19
 Identities = 16/54 (29%), Positives = 27/54 (50%)

Query:    25 VSPIGILSKIQKIGSHLGHGREEDAHEFLRCAVDTMQSVCLKEFGAKGKIAEET 78
             VSP    ++IQ+         ++DA EFLR  +D + +  +    A+ K + ET
Sbjct:   342 VSPSEFKTQIQRYAPRFMGYNQQDAQEFLRFLLDGLHNE-VNRVAARPKASPET 394


>UNIPROTKB|Q5ZM45 [details] [associations]
            symbol:USP48 "Ubiquitin carboxyl-terminal hydrolase 48"
            species:9031 "Gallus gallus" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0008234 "cysteine-type
            peptidase activity" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
            InterPro:IPR000626 InterPro:IPR001394 InterPro:IPR006615
            InterPro:IPR018200 Pfam:PF00240 Pfam:PF00443 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS51283 SMART:SM00213
            SMART:SM00695 Prosite:PS00299 GO:GO:0005634 GO:GO:0005737
            GO:GO:0008234 GO:GO:0006511 InterPro:IPR019955 PROSITE:PS50053
            GO:GO:0004221 eggNOG:COG5077 HSSP:P54578 MEROPS:C19.068 KO:K11858
            EMBL:AJ719539 IPI:IPI00571210 RefSeq:NP_001073211.1
            UniGene:Gga.20232 ProteinModelPortal:Q5ZM45 GeneID:769457
            KEGG:gga:769457 CTD:84196 HOGENOM:HOG000231639 HOVERGEN:HBG080368
            InParanoid:Q5ZM45 OrthoDB:EOG4GF3DC NextBio:20919686 Uniprot:Q5ZM45
        Length = 1033

 Score = 258 (95.9 bits), Expect = 7.3e-19, P = 7.3e-19
 Identities = 68/237 (28%), Positives = 124/237 (52%)

Query:    14 LILNAKDGSYPVSPIGILSKIQKIGSHLGHGREEDAHEFLRCAVDTMQSVCLKEFGAKGK 73
             L+ N+K   Y + P G    ++ +G  L  G+++DA EF +  +  ++    K+     K
Sbjct:   152 LLQNSKR-RY-IDPSGF---VKALG--LDTGQQQDAQEFSKLFMSLLEDTLSKQ-----K 199

Query:    74 IAEETTLIGLTFGGYLRSKIKCLKCLGKSELYERMMDLTVEIDGDIGTLEEALAQFTASE 133
               +   ++   F G       C +C  +S+L  +  +L + I G    L + + +F   E
Sbjct:   200 NPDVRNIVQKQFCGEYAYVTVCNQCGRESKLVSKFYELELNIQGH-KQLTDCITEFLKEE 258

Query:   134 ILVGENKYYCSRCKSYEKAKKKLTVLEEPNILTIVLKRF----ESGNFGKLNKSVWFPEV 189
              L G+N+Y+C  C+S + A +K+ +L  P  L + L RF    ++G+  KLN  + F E+
Sbjct:   259 KLEGDNRYFCETCQSKQNATRKIRLLSLPCTLNLQLMRFVFDRQTGHKKKLNTYIGFSEL 318

Query:   190 LNMAPYMSRTGDGSPMYSLYAVVVHLDVTNATFSGHYVCYVKNSHE-EWFRIDDSTV 245
             L+M P+M +  +G  +Y L AV++H  V+   +SGHY+ +VK+    EW++ +D  +
Sbjct:   319 LDMEPFMEQK-NGVYVYELSAVLIHRGVS--AYSGHYIAHVKDPQTGEWYKFNDEDI 372


>UNIPROTKB|F1SAF6 [details] [associations]
            symbol:USP2 "Ubiquitin carboxyl-terminal hydrolase"
            species:9823 "Sus scrofa" [GO:0008234 "cysteine-type peptidase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 GO:GO:0008234 GO:GO:0006511 GO:GO:0004221 KO:K11833
            GeneTree:ENSGT00670000098024 OMA:SASHRSY EMBL:CU915638
            RefSeq:XP_003357373.1 Ensembl:ENSSSCT00000016486 GeneID:100520041
            KEGG:ssc:100520041 ArrayExpress:F1SAF6 Uniprot:F1SAF6
        Length = 396

 Score = 236 (88.1 bits), Expect = 8.0e-19, Sum P(2) = 8.0e-19
 Identities = 65/203 (32%), Positives = 104/203 (51%)

Query:    74 IAEETTLIGLTFGGYLRSKIKCLKCLGKSELYERMMDLTVEID--G--DIGTLEEALAQF 129
             +  E + IG  F G L+S + C  C   S +++   DL++ I   G  ++ TL + +  F
Sbjct:   195 LEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEV-TLMDCMRLF 253

Query:   130 TASEILVGENKYYCSRCKSYEKAKKKLTVLEEPNILTIVLKRFESGNF--GKLNKSVWFP 187
             T  ++L G+ K  C RC++ ++  KK +V   P IL + LKRF        KL   V FP
Sbjct:   254 TKEDVLDGDEKPTCCRCRARKRCIKKFSVQRFPKILVLHLKRFSESRIRTSKLTTFVNFP 313

Query:   188 -EVLNMAPYMSRTGDGSPMYSLYAVVVHLDVTNATFSGHYVCYVKNSHE-EWFRIDDSTV 245
                L++  + S   + + +Y+LYAV  H   +  T  GHY  Y ++    EW   +DS+V
Sbjct:   314 LRDLDLREFASENINHA-VYNLYAVSNH---SGTTMGGHYTAYCRSPVTGEWHTFNDSSV 369

Query:   246 IPVKLERVLSEEAYMLLYARHSP 268
              P+   +V + +AY+L Y   SP
Sbjct:   370 SPMSSSQVRTSDAYLLFYELASP 392

 Score = 51 (23.0 bits), Expect = 8.0e-19, Sum P(2) = 8.0e-19
 Identities = 12/38 (31%), Positives = 20/38 (52%)

Query:    25 VSPIGILSKIQKIGSHLGHGREEDAHEFLRCAVDTMQS 62
             VSP    ++IQ+         ++DA EFLR  +D + +
Sbjct:   125 VSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHN 162


>RGD|1308045 [details] [associations]
            symbol:Usp12 "ubiquitin specific peptidase 12" species:10116
            "Rattus norvegicus" [GO:0004197 "cysteine-type endopeptidase
            activity" evidence=ISO] [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA;ISO] [GO:0004843 "ubiquitin-specific
            protease activity" evidence=ISO] [GO:0006511 "ubiquitin-dependent
            protein catabolic process" evidence=IEA] [GO:0016579 "protein
            deubiquitination" evidence=ISO] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 RGD:1308045 GO:GO:0006511 GO:GO:0004221
            GeneTree:ENSGT00650000093027 IPI:IPI00188181 PRIDE:F1LWD4
            Ensembl:ENSRNOT00000044038 Uniprot:F1LWD4
        Length = 354

 Score = 244 (91.0 bits), Expect = 8.8e-19, P = 8.8e-19
 Identities = 77/259 (29%), Positives = 130/259 (50%)

Query:    25 VSPIGILSKIQKIGSHLGHGREEDAHEFLRCAVDTMQSVCLKEFGAK---GKI------A 75
             + P   +++++K      +  ++DAHEFL   ++T+  +  +E   +   G++      +
Sbjct:    85 IPPKKFITRLRKENELFDNYMQQDAHEFLNYLLNTIADILQEERKQEKQNGRLRNGDVDS 144

Query:    76 EET------TLIGLTFGGYLRSKIKCLKCLGKSELYERMMDLTVEIDGDIGTLEEALAQF 129
             E+       T +   F G L ++ +CL C   S   E  +DL+V+++ +  ++   L  F
Sbjct:   145 EDNNSTPDPTWVHEIFQGTLTNETRCLTCETISSKDEDFLDLSVDVEQNT-SITHCLRGF 203

Query:   130 TASEILVGENKYYCSRCKSYEKAKKKLTVLEEPNILTIVLKRF----ESGNFGKLNKSVW 185
             + +E L  E KYYC  C+S ++A K++ V + P IL + LKRF    +   + KL+  V 
Sbjct:   204 SNTETLCSEYKYYCEECRSKQEAHKRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVV 263

Query:   186 FPEVLNMAPYMSRTGDGS-P--MYSLYAVVVHLDVTNATFSGHYVCYVKNSHEEWFRIDD 242
             FP  L +    + +GD + P  MY L AVVVH    +    GHY+  VK SH+ W   DD
Sbjct:   264 FPLELRL---FNTSGDATNPDRMYDLVAVVVHCG--SGPNRGHYIAIVK-SHDFWLLFDD 317

Query:   243 STVIPVKLERVLSEEAYML 261
               V  +  + +  EE Y L
Sbjct:   318 DIVEKIDAQAI--EEFYGL 334


>UNIPROTKB|E2R587 [details] [associations]
            symbol:USP46 "Ubiquitin carboxyl-terminal hydrolase"
            species:9615 "Canis lupus familiaris" [GO:0008234 "cysteine-type
            peptidase activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent
            protein catabolic process" evidence=IEA] [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 GO:GO:0008234 GO:GO:0006511 GO:GO:0004221
            GeneTree:ENSGT00650000093027 OMA:TEPTWVH EMBL:AAEX03009057
            EMBL:AAEX03009058 Ensembl:ENSCAFT00000039391 Uniprot:E2R587
        Length = 355

 Score = 244 (91.0 bits), Expect = 9.2e-19, P = 9.2e-19
 Identities = 79/256 (30%), Positives = 123/256 (48%)

Query:    25 VSPIGILSKIQKIGSHLGHGREEDAHEFLRCAVDTMQSVCLKEFGAK---GKI------- 74
             + P   +S+++K      +  ++DAHEFL   ++T+  +  +E   +   GK+       
Sbjct:    87 IPPKKFISRLRKENDLFDNYMQQDAHEFLNYLLNTIADILQEEKKQEKQNGKLKNGNMNE 146

Query:    75 -AE----ETTLIGLTFGGYLRSKIKCLKCLGKSELYERMMDLTVEIDGDIGTLEEALAQF 129
              AE    E T +   F G L ++ +CL C   S   E  + L+V+++ +  T    L  F
Sbjct:   147 PAENNKPELTWVHEIFQGTLTNETRCLNCETVSSKDEDFLALSVDVEQNTST--HCLRDF 204

Query:   130 TASEILVGENKYYCSRCKSYEKAKKKLTVLEEPNILTIVLKRF----ESGNFGKLNKSVW 185
             + +E L  E KYYC  C S ++A+K++ V + P IL + LKRF    +   + KL+  V 
Sbjct:   205 SNTETLCSEQKYYCETCCSKQEAQKRMRVKKLPMILALHLKRFKYMEQLHRYTKLSYRVV 264

Query:   186 FPEVLNMAPYMSRTGDGSPMYSLYAVVVHLDVTNATFSGHYVCYVKNSHEEWFRIDDSTV 245
             FP  L +    S   +   MY L AVVVH    +    GHY+  VK SH  W   DD  V
Sbjct:   265 FPLELRLFNTSSDAVNLDRMYDLVAVVVHCG--SGPNRGHYITIVK-SHGFWLLFDDDIV 321

Query:   246 IPVKLERVLSEEAYML 261
               +  + +  EE Y L
Sbjct:   322 EKIDAQAI--EEFYGL 335


>UNIPROTKB|F1NZX5 [details] [associations]
            symbol:USP48 "Ubiquitin carboxyl-terminal hydrolase 48"
            species:9031 "Gallus gallus" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
            InterPro:IPR000626 InterPro:IPR001394 InterPro:IPR006615
            InterPro:IPR018200 Pfam:PF00240 Pfam:PF00443 PROSITE:PS00973
            PROSITE:PS50235 PROSITE:PS51283 SMART:SM00213 SMART:SM00695
            GO:GO:0005739 GO:GO:0005634 GO:GO:0006511 InterPro:IPR019955
            PROSITE:PS50053 GO:GO:0004221 GeneTree:ENSGT00630000089581
            IPI:IPI00571210 OMA:LSNWPED EMBL:AADN02077372 EMBL:AADN02077373
            EMBL:AADN02077374 Ensembl:ENSGALT00000022876 Uniprot:F1NZX5
        Length = 989

 Score = 256 (95.2 bits), Expect = 1.1e-18, P = 1.1e-18
 Identities = 68/234 (29%), Positives = 123/234 (52%)

Query:    14 LILNAKDGSYPVSPIGILSKIQKIGSHLGHGREEDAHEFLRCAVDTMQSVCLKEFGAKGK 73
             L+ N+K   Y + P G    ++ +G  L  G+++DA EF +  +  ++    K+     K
Sbjct:   108 LLQNSKR-RY-IDPSGF---VKALG--LDTGQQQDAQEFSKLFMSLLEDTLSKQ-----K 155

Query:    74 IAEETTLIGLTFGGYLRSKIKCLKCLGKSELYERMMDLTVEIDGDIGTLEEALAQFTASE 133
               +   ++   F G       C +C  +S+L  +  +L + I G    L + + +F   E
Sbjct:   156 NPDVRNIVQKQFCGEYAYVTVCNQCGRESKLVSKFYELELNIQGH-KQLTDCITEFLKEE 214

Query:   134 ILVGENKYYCSRCKSYEKAKKKLTVLEEPNILTIVLKRF----ESGNFGKLNKSVWFPEV 189
              L G+N+Y+C  C+S + A +K+ +L  P  L + L RF    ++G+  KLN  + F E+
Sbjct:   215 KLEGDNRYFCETCQSKQNATRKIRLLSLPCTLNLQLMRFVFDRQTGHKKKLNTYIGFSEL 274

Query:   190 LNMAPYMSRTGDGSPMYSLYAVVVHLDVTNATFSGHYVCYVKNSHE-EWFRIDD 242
             L+M P+M +  +G  +Y L AV++H  V+   +SGHY+ +VK+    EW++ +D
Sbjct:   275 LDMEPFMEQK-NGVYVYELSAVLIHRGVS--AYSGHYIAHVKDPQTGEWYKFND 325


>UNIPROTKB|F1NQJ6 [details] [associations]
            symbol:USP3 "Ubiquitin carboxyl-terminal hydrolase"
            species:9031 "Gallus gallus" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0008270 "zinc ion binding"
            evidence=IEA] [GO:0008234 "cysteine-type peptidase activity"
            evidence=IEA] [GO:0000278 "mitotic cell cycle" evidence=IEA]
            [GO:0000790 "nuclear chromatin" evidence=IEA] [GO:0006281 "DNA
            repair" evidence=IEA] [GO:0016578 "histone deubiquitination"
            evidence=IEA] [GO:0031647 "regulation of protein stability"
            evidence=IEA] [GO:0042393 "histone binding" evidence=IEA]
            InterPro:IPR001394 InterPro:IPR001607 InterPro:IPR018200
            Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 PROSITE:PS50271 GO:GO:0046872 GO:GO:0008270
            GO:GO:0006281 GO:GO:0008234 GO:GO:0031647 GO:GO:0000790
            Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511 GO:GO:0016578
            GO:GO:0004221 GO:GO:0000278 GeneTree:ENSGT00690000102047
            OMA:DCLRSFT EMBL:AADN02040443 IPI:IPI00579359
            Ensembl:ENSGALT00000005420 Uniprot:F1NQJ6
        Length = 521

 Score = 240 (89.5 bits), Expect = 1.4e-18, Sum P(2) = 1.4e-18
 Identities = 68/212 (32%), Positives = 106/212 (50%)

Query:    78 TTLIGLTFGGYLRSKIKCLKCLGKSELYERMMDLTVEI-------------DGDIGTLEE 124
             +T++   FGG L++++ CL C  +S  ++  +DL+++I             +G + TL +
Sbjct:   308 STVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRNKRTKNQENGPMCTLRD 367

Query:   125 ALAQFTASEILVGENKYYCSRCKSYEKAKKKLTVLEEPNILTIVLKRFESGNF--GKLNK 182
              L  FT  E L     Y C +CK  +K+ KK  + + P +L + LKRF    +   K++ 
Sbjct:   368 CLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDT 427

Query:   183 SVWFP-EVLNMAPYM---SRTGDGSPMYSLYAVVVHLDVTNATFSGHYVCYVKNSHE-EW 237
              V FP   L+M  Y+     +G  S +Y L AVVVH    +   SGHY  Y   +HE  W
Sbjct:   428 YVEFPLRGLDMKCYLLEPENSGPESCLYDLAAVVVHHG--SGVGSGHYTAYA--AHEGRW 483

Query:   238 FRIDDSTVIPVKLERVLSEEAYMLLYARHSPR 269
             F  +DSTV     E V+  +AY+L Y     +
Sbjct:   484 FHFNDSTVTLTDEETVVKAKAYILFYVERQAK 515

 Score = 52 (23.4 bits), Expect = 1.4e-18, Sum P(2) = 1.4e-18
 Identities = 14/47 (29%), Positives = 25/47 (53%)

Query:    13 CLILNAKDGSY-PVSPIGILSKIQKIGSHLGHGREEDAHEFLRCAVD 58
             C +      ++ P S   ++ KI    S  G+ +++DAHEF+R  +D
Sbjct:   226 CALWQGSQTAFSPESLFYVVWKIMPNFSSRGY-QQQDAHEFMRYLLD 271


>WB|WBGene00011216 [details] [associations]
            symbol:usp-46 species:6239 "Caenorhabditis elegans"
            [GO:0004221 "ubiquitin thiolesterase activity" evidence=IEA]
            [GO:0006511 "ubiquitin-dependent protein catabolic process"
            evidence=IEA] [GO:0040027 "negative regulation of vulval
            development" evidence=IMP] [GO:0005768 "endosome" evidence=IDA]
            [GO:0005737 "cytoplasm" evidence=IDA] [GO:0044297 "cell body"
            evidence=IDA] [GO:0071947 "protein deubiquitination involved in
            ubiquitin-dependent protein catabolic process" evidence=IMP]
            [GO:2000311 "regulation of
            alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective
            glutamate receptor activity" evidence=IMP] [GO:0035255 "ionotropic
            glutamate receptor binding" evidence=IPI] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 GO:GO:0005768 GO:GO:0008234 GO:GO:0040027
            GO:GO:0044297 GO:GO:0004221 EMBL:Z29095 GO:GO:2000311
            eggNOG:COG5077 GO:GO:0071947 KO:K11842 GeneTree:ENSGT00650000093027
            HOGENOM:HOG000231498 PIR:S40715 RefSeq:NP_499162.2
            RefSeq:NP_499163.2 UniGene:Cel.6955 ProteinModelPortal:P34547
            SMR:P34547 STRING:P34547 MEROPS:C19.A37 PaxDb:P34547 PRIDE:P34547
            EnsemblMetazoa:R10E11.3a.1 EnsemblMetazoa:R10E11.3a.2 GeneID:176381
            KEGG:cel:CELE_R10E11.3 UCSC:R10E11.3a.1 CTD:176381
            WormBase:R10E11.3a WormBase:R10E11.3b InParanoid:P34547 OMA:STDANIQ
            NextBio:892334 Uniprot:P34547
        Length = 426

 Score = 227 (85.0 bits), Expect = 1.8e-18, Sum P(2) = 1.8e-18
 Identities = 61/187 (32%), Positives = 93/187 (49%)

Query:    75 AEETTLIGLTFGGYLRSKIKCLKCLGKSELYERMMDLTVEIDGDIGTLEEALAQFTASEI 134
             ++ TT I   F G L ++ +CL C   S   E  +DL+++++ +  ++   L  F+ +E 
Sbjct:   191 SDTTTWIHEIFQGILTNETRCLSCETVSSKDEDFLDLSIDVEQNT-SISHCLRVFSETET 249

Query:   135 LVGENKYYCSRCKSYEKAKKKLTVLEEPNILTIVLKRFES----GNFGKLNKSVWFPEVL 190
             L G+ KY+C  C S ++A+K++ + + P +L + LKRF+         KL+  V FP  L
Sbjct:   250 LCGDQKYFCETCSSKQEAQKRMRIKKPPQLLALHLKRFKFVEPLNRHTKLSYRVVFPLEL 309

Query:   191 NMAPYMSRTGDGSPMYSLYAVVVHLDVTNATFSGHYVCYVKNSHEEWFRIDDSTVIPVKL 250
              +         G  MY L A VVH   T     GHY+  VK S+  W   DD  V   KL
Sbjct:   310 RLFNVSDDAEYGDRMYDLVATVVHCGATPNR--GHYITLVK-SNSFWLVFDDDIV--EKL 364

Query:   251 ERVLSEE 257
             E    EE
Sbjct:   365 EVSSMEE 371

 Score = 61 (26.5 bits), Expect = 1.8e-18, Sum P(2) = 1.8e-18
 Identities = 13/57 (22%), Positives = 29/57 (50%)

Query:    25 VSPIGILSKIQKIGSHLGHGREEDAHEFLRCAVDTMQSVCLKE-FGAKGKIAEETTL 80
             ++P   ++K++K      +  ++DAHEF    ++T+    ++E    + K +   TL
Sbjct:    93 IAPKRFITKLKKENELFDNYMQQDAHEFFNYLINTISETLIQEKIAEREKASRHGTL 149


>MGI|MGI:1270128 [details] [associations]
            symbol:Usp12 "ubiquitin specific peptidase 12" species:10090
            "Mus musculus" [GO:0004197 "cysteine-type endopeptidase activity"
            evidence=ISO] [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=ISO] [GO:0004843 "ubiquitin-specific protease activity"
            evidence=ISO] [GO:0006508 "proteolysis" evidence=IEA] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA]
            [GO:0008233 "peptidase activity" evidence=IEA] [GO:0008234
            "cysteine-type peptidase activity" evidence=IEA] [GO:0016579
            "protein deubiquitination" evidence=ISO] [GO:0016787 "hydrolase
            activity" evidence=IEA] InterPro:IPR001394 InterPro:IPR018200
            Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235
            MGI:MGI:1270128 GO:GO:0006511 GO:GO:0004197 GO:GO:0004843
            GO:GO:0016579 GO:GO:0004221 HSSP:Q93009 eggNOG:COG5077 KO:K11842
            CTD:219333 GeneTree:ENSGT00650000093027 HOGENOM:HOG000231498
            OMA:SKFASFC OrthoDB:EOG42Z4Q8 MEROPS:C19.020 HOVERGEN:HBG054038
            EMBL:AK006739 EMBL:AK035629 EMBL:AK167153 EMBL:BC049274
            EMBL:BC055398 EMBL:BC068136 EMBL:AF441835 IPI:IPI00228375
            IPI:IPI00938515 RefSeq:NP_035799.1 UniGene:Mm.167971
            ProteinModelPortal:Q9D9M2 SMR:Q9D9M2 STRING:Q9D9M2
            PhosphoSite:Q9D9M2 PaxDb:Q9D9M2 PRIDE:Q9D9M2
            Ensembl:ENSMUST00000085614 GeneID:22217 KEGG:mmu:22217
            UCSC:uc008xtg.1 InParanoid:Q80Y43 NextBio:302225 Bgee:Q9D9M2
            CleanEx:MM_USP12 Genevestigator:Q9D9M2
            GermOnline:ENSMUSG00000029640 Uniprot:Q9D9M2
        Length = 370

 Score = 243 (90.6 bits), Expect = 2.0e-18, P = 2.0e-18
 Identities = 78/259 (30%), Positives = 127/259 (49%)

Query:    25 VSPIGILSKIQKIGSHLGHGREEDAHEFLRCAVDTMQSVCL------KEFGA--KGKIAE 76
             + P   +++++K      +  ++DAHEFL   ++T+  +        K+ G    G +  
Sbjct:   101 IPPKKFITRLRKENELFDNYMQQDAHEFLNYLLNTIADILQEERKQEKQNGRLRNGDVDN 160

Query:    77 ET-------TLIGLTFGGYLRSKIKCLKCLGKSELYERMMDLTVEIDGDIGTLEEALAQF 129
             E        T +   F G L ++ +CL C   S   E  +DL+V+++ +  ++   L  F
Sbjct:   161 EDNNSTPDPTWVHEIFQGTLTNETRCLTCETISSKDEDFLDLSVDVEQNT-SITHCLRGF 219

Query:   130 TASEILVGENKYYCSRCKSYEKAKKKLTVLEEPNILTIVLKRF----ESGNFGKLNKSVW 185
             + +E L  E KYYC  C+S ++A K++ V + P IL + LKRF    +   + KL+  V 
Sbjct:   220 SNTETLCSEYKYYCEECRSKQEAHKRMKVKKLPLILALHLKRFKYMDQLHRYTKLSYRVV 279

Query:   186 FPEVLNMAPYMSRTGDGS-P--MYSLYAVVVHLDVTNATFSGHYVCYVKNSHEEWFRIDD 242
             FP  L +    + +GD + P  MY L AVVVH    +    GHY+  VK SH+ W   DD
Sbjct:   280 FPLELRL---FNTSGDATNPDRMYDLVAVVVHCG--SGPNRGHYIAIVK-SHDFWLLFDD 333

Query:   243 STVIPVKLERVLSEEAYML 261
               V  +  + +  EE Y L
Sbjct:   334 DIVEKIDAQAI--EEFYGL 350


>RGD|735213 [details] [associations]
            symbol:Usp48 "ubiquitin specific peptidase 48" species:10116
            "Rattus norvegicus" [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737
            "cytoplasm" evidence=IEA;ISO] [GO:0005739 "mitochondrion"
            evidence=IEA;ISO] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0008234 "cysteine-type
            peptidase activity" evidence=IEA] [GO:0045121 "membrane raft"
            evidence=IDA] [GO:0045211 "postsynaptic membrane" evidence=IDA]
            [GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR001394
            InterPro:IPR006615 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS51283 RGD:735213
            Prosite:PS00299 GO:GO:0005634 GO:GO:0005737 GO:GO:0045211
            GO:GO:0008234 GO:GO:0045121 GO:GO:0006511 InterPro:IPR019955
            PROSITE:PS50053 GO:GO:0004221 eggNOG:COG5077 HSSP:P54578
            MEROPS:C19.068 KO:K11858 CTD:84196 HOGENOM:HOG000231639
            HOVERGEN:HBG080368 OrthoDB:EOG4GF3DC EMBL:AB073880 IPI:IPI00400620
            RefSeq:NP_942080.1 UniGene:Rn.100022 ProteinModelPortal:Q76LT8
            PhosphoSite:Q76LT8 PRIDE:Q76LT8 GeneID:362636 KEGG:rno:362636
            UCSC:RGD:735213 NextBio:680703 ArrayExpress:Q76LT8
            Genevestigator:Q76LT8 GermOnline:ENSRNOG00000013602 Uniprot:Q76LT8
        Length = 1036

 Score = 254 (94.5 bits), Expect = 2.0e-18, P = 2.0e-18
 Identities = 64/226 (28%), Positives = 117/226 (51%)

Query:    25 VSPIGILSKIQKIGSHLGHGREEDAHEFLRCAVDTMQSVCLKEFGAKGKIAEETTLIGLT 84
             + P G    ++ +G  L  G+++DA E  +  +  ++    K+     K  +   ++   
Sbjct:   163 IDPSGF---VKALG--LDTGQQQDAQESSKLFMSLLEDTLSKQ-----KNPDVRNVVQQQ 212

Query:    85 FGGYLRSKIKCLKCLGKSELYERMMDLTVEIDGDIGTLEEALAQFTASEILVGENKYYCS 144
             F G       C +C  +S+L  +  +L + I G    L + +++F   E L G+N+Y+C 
Sbjct:   213 FCGEYAYVTVCSQCGRESKLVSKFYELELNIQGH-KQLTDCISEFLKEERLEGDNRYFCE 271

Query:   145 RCKSYEKAKKKLTVLEEPNILTIVLKRF----ESGNFGKLNKSVWFPEVLNMAPYMSRTG 200
              C+S + A +K+ +L  P  L + L RF    ++G+  KLN  + F E L+M PY+   G
Sbjct:   272 NCQSKQNATRKIRLLSLPCTLNLQLMRFVFDRQTGHKKKLNAYIGFSESLDMEPYVEHKG 331

Query:   201 DGSPMYSLYAVVVHLDVTNATFSGHYVCYVKNSHE-EWFRIDDSTV 245
              GS +Y L AV++H  V+   +SGHY+ +VK+    +W++ +D  +
Sbjct:   332 -GSFVYELSAVLIHRGVS--AYSGHYIAHVKDPQSGDWYKFNDEDI 374


>UNIPROTKB|Q76LT8 [details] [associations]
            symbol:Usp48 "Ubiquitin carboxyl-terminal hydrolase 48"
            species:10116 "Rattus norvegicus" [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA]
            InterPro:IPR001394 InterPro:IPR006615 InterPro:IPR018200
            Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235
            PROSITE:PS51283 RGD:735213 Prosite:PS00299 GO:GO:0005634
            GO:GO:0005737 GO:GO:0045211 GO:GO:0008234 GO:GO:0045121
            GO:GO:0006511 InterPro:IPR019955 PROSITE:PS50053 GO:GO:0004221
            eggNOG:COG5077 HSSP:P54578 MEROPS:C19.068 KO:K11858 CTD:84196
            HOGENOM:HOG000231639 HOVERGEN:HBG080368 OrthoDB:EOG4GF3DC
            EMBL:AB073880 IPI:IPI00400620 RefSeq:NP_942080.1 UniGene:Rn.100022
            ProteinModelPortal:Q76LT8 PhosphoSite:Q76LT8 PRIDE:Q76LT8
            GeneID:362636 KEGG:rno:362636 UCSC:RGD:735213 NextBio:680703
            ArrayExpress:Q76LT8 Genevestigator:Q76LT8
            GermOnline:ENSRNOG00000013602 Uniprot:Q76LT8
        Length = 1036

 Score = 254 (94.5 bits), Expect = 2.0e-18, P = 2.0e-18
 Identities = 64/226 (28%), Positives = 117/226 (51%)

Query:    25 VSPIGILSKIQKIGSHLGHGREEDAHEFLRCAVDTMQSVCLKEFGAKGKIAEETTLIGLT 84
             + P G    ++ +G  L  G+++DA E  +  +  ++    K+     K  +   ++   
Sbjct:   163 IDPSGF---VKALG--LDTGQQQDAQESSKLFMSLLEDTLSKQ-----KNPDVRNVVQQQ 212

Query:    85 FGGYLRSKIKCLKCLGKSELYERMMDLTVEIDGDIGTLEEALAQFTASEILVGENKYYCS 144
             F G       C +C  +S+L  +  +L + I G    L + +++F   E L G+N+Y+C 
Sbjct:   213 FCGEYAYVTVCSQCGRESKLVSKFYELELNIQGH-KQLTDCISEFLKEERLEGDNRYFCE 271

Query:   145 RCKSYEKAKKKLTVLEEPNILTIVLKRF----ESGNFGKLNKSVWFPEVLNMAPYMSRTG 200
              C+S + A +K+ +L  P  L + L RF    ++G+  KLN  + F E L+M PY+   G
Sbjct:   272 NCQSKQNATRKIRLLSLPCTLNLQLMRFVFDRQTGHKKKLNAYIGFSESLDMEPYVEHKG 331

Query:   201 DGSPMYSLYAVVVHLDVTNATFSGHYVCYVKNSHE-EWFRIDDSTV 245
              GS +Y L AV++H  V+   +SGHY+ +VK+    +W++ +D  +
Sbjct:   332 -GSFVYELSAVLIHRGVS--AYSGHYIAHVKDPQSGDWYKFNDEDI 374


>ZFIN|ZDB-GENE-040426-2323 [details] [associations]
            symbol:usp33 "ubiquitin specific peptidase 33"
            species:7955 "Danio rerio" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA;ISS] [GO:0008270 "zinc ion binding"
            evidence=IEA;ISS] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0016477 "cell migration"
            evidence=ISS] [GO:0008277 "regulation of G-protein coupled receptor
            protein signaling pathway" evidence=ISS] [GO:0007411 "axon
            guidance" evidence=ISS] [GO:0004197 "cysteine-type endopeptidase
            activity" evidence=ISS] [GO:0016579 "protein deubiquitination"
            evidence=ISS] [GO:0070536 "protein K63-linked deubiquitination"
            evidence=ISS] [GO:0071108 "protein K48-linked deubiquitination"
            evidence=ISS] [GO:0046872 "metal ion binding" evidence=IEA]
            [GO:0006897 "endocytosis" evidence=IEA] [GO:0005737 "cytoplasm"
            evidence=IEA] [GO:0008233 "peptidase activity" evidence=IEA]
            [GO:0016787 "hydrolase activity" evidence=IEA] [GO:0006508
            "proteolysis" evidence=IEA] [GO:0008234 "cysteine-type peptidase
            activity" evidence=IEA] [GO:0048471 "perinuclear region of
            cytoplasm" evidence=IEA] InterPro:IPR001394 InterPro:IPR001607
            InterPro:IPR006615 InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148
            Pfam:PF06337 PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235
            PROSITE:PS50271 PROSITE:PS51283 SMART:SM00695
            ZFIN:ZDB-GENE-040426-2323 GO:GO:0048471 GO:GO:0007411 GO:GO:0016477
            GO:GO:0046872 GO:GO:0008270 GO:GO:0006897 Gene3D:3.30.40.10
            InterPro:IPR013083 GO:GO:0006511 GO:GO:0008277 GO:GO:0071108
            GO:GO:0070536 GO:GO:0004197 GO:GO:0004221 eggNOG:COG5560
            GeneTree:ENSGT00690000101718 HOGENOM:HOG000286031
            HOVERGEN:HBG054196 KO:K11848 MEROPS:C19.037 CTD:23032 OMA:TMEEDKS
            OrthoDB:EOG4B8JC9 EMBL:BX649634 EMBL:BC066557 IPI:IPI00512747
            RefSeq:NP_998392.1 UniGene:Dr.32515 ProteinModelPortal:A5PMR2
            SMR:A5PMR2 Ensembl:ENSDART00000018114 GeneID:406508 KEGG:dre:406508
            NextBio:20818084 ArrayExpress:A5PMR2 Bgee:A5PMR2 Uniprot:A5PMR2
        Length = 897

 Score = 214 (80.4 bits), Expect = 2.4e-18, Sum P(4) = 2.4e-18
 Identities = 54/154 (35%), Positives = 78/154 (50%)

Query:   117 GDIGTLEEALAQFTASEILVGENKYYCSRCKSYEKAKKKLTVLEEPNILTIVLKRFESG- 175
             G + TL++ LA F A + L G+N Y C +CK      K   V   P IL I LKRF    
Sbjct:   519 GPVVTLQDCLAAFFARDELKGDNMYSCEKCKKLRNGVKFCKVQSLPEILCIHLKRFRHEL 578

Query:   176 NFG-KLNKSVWFP-EVLNMAPYMSRTGDG-SPMYSLYAVVVHLDVTNATFSGHYVCYVKN 232
              F  K+   V FP E L M P++++     +  Y L +V+ H    +   SGHY+ Y +N
Sbjct:   579 MFSTKIGTHVSFPLEGLEMQPFLAKDSSALTTTYDLLSVICHHGTAS---SGHYIAYCRN 635

Query:   233 S-HEEWFRIDDSTVIPVKLERVLSEEAYMLLYAR 265
               ++ W+  DD +V  V    V + EAY+L Y +
Sbjct:   636 ELNQLWYEFDDQSVTEVSESCVQNAEAYVLFYKK 669

 Score = 58 (25.5 bits), Expect = 2.4e-18, Sum P(4) = 2.4e-18
 Identities = 15/52 (28%), Positives = 25/52 (48%)

Query:    79 TLIGLTFGGYLRSKIKCLKCLGKSELYERMMDLTVEIDG--DIGTLEEALAQ 128
             ++I   F G + S ++CL C   S   E   D+++ I G  D+  L  +  Q
Sbjct:   436 SIISEVFDGTIVSSVQCLTCDRVSVTLENFQDISLPIPGKEDLAKLHSSSHQ 487

 Score = 55 (24.4 bits), Expect = 2.4e-18, Sum P(4) = 2.4e-18
 Identities = 16/66 (24%), Positives = 30/66 (45%)

Query:     2 PGLHSTFDVVSCLILNAKDGSYPVSPIGILSKIQKIGSHLGHGREEDAHEFLRCAVDTMQ 61
             P L  ++  +   + +    +Y V P  +   I+ +        ++D+ EFLRC +D + 
Sbjct:   197 PALCKSYQKLITDLWHKNRNAYVV-PTNLFQGIKAVNPMFRGYSQQDSQEFLRCLMDQLH 255

Query:    62 SVCLKE 67
                LKE
Sbjct:   256 EE-LKE 260

 Score = 52 (23.4 bits), Expect = 2.4e-18, Sum P(4) = 2.4e-18
 Identities = 11/41 (26%), Positives = 21/41 (51%)

Query:   254 LSEEAYMLLYARHSPRPPALIRNNVSHGVKSKKKNLEAVDL 294
             +SEE +  L+  H   P   +R +VSH      ++ E +++
Sbjct:   852 ISEETWNFLHNIHGGGPVVTVRPSVSHQESETSQSEEKIEV 892


>UNIPROTKB|A0JM59 [details] [associations]
            symbol:usp20 "Ubiquitin carboxyl-terminal hydrolase 20"
            species:8364 "Xenopus (Silurana) tropicalis" [GO:0004197
            "cysteine-type endopeptidase activity" evidence=ISS] [GO:0004221
            "ubiquitin thiolesterase activity" evidence=ISS] [GO:0008277
            "regulation of G-protein coupled receptor protein signaling
            pathway" evidence=ISS] [GO:0016579 "protein deubiquitination"
            evidence=ISS] [GO:0070536 "protein K63-linked deubiquitination"
            evidence=ISS] [GO:0071108 "protein K48-linked deubiquitination"
            evidence=ISS] InterPro:IPR001394 InterPro:IPR001607
            InterPro:IPR006615 InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148
            Pfam:PF06337 PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235
            PROSITE:PS50271 PROSITE:PS51283 SMART:SM00695 GO:GO:0048471
            GO:GO:0046872 GO:GO:0008270 GO:GO:0006897 Gene3D:3.30.40.10
            InterPro:IPR013083 GO:GO:0006511 GO:GO:0008277 GO:GO:0071108
            GO:GO:0070536 GO:GO:0004197 GO:GO:0004221 eggNOG:COG5560 CTD:10868
            HOVERGEN:HBG054196 KO:K11848 EMBL:BC125749 RefSeq:NP_001090641.1
            UniGene:Str.43868 ProteinModelPortal:A0JM59 SMR:A0JM59
            GeneID:100036606 KEGG:xtr:100036606 Xenbase:XB-GENE-966528
            Uniprot:A0JM59
        Length = 884

 Score = 219 (82.2 bits), Expect = 3.1e-18, Sum P(3) = 3.1e-18
 Identities = 59/157 (37%), Positives = 81/157 (51%)

Query:   117 GDIGTLEEALAQFTASEILVGENKYYCSRCKSYEKAKKKLTVLEEPNILTIVLKRFESG- 175
             G + TLE+ LA F A++ L G+N Y C RCK      K   VL  P IL I LKRF    
Sbjct:   504 GPMITLEDCLAAFFAADELKGDNMYSCERCKKLRNGVKYCKVLRLPEILCIHLKRFRHEV 563

Query:   176 --NFGKLNKSVWFP-EVLNMAPYMSRTGDGS-PMYSLYAVVVHLDVTNATFSGHYVCYVK 231
               +F K+   V FP E LN+ P++++        Y L AV+ H     +  SGHY+ Y +
Sbjct:   564 MYSF-KIGSHVSFPLEGLNLRPFLAKECVSRITTYDLLAVICH---HGSASSGHYISYCQ 619

Query:   232 NS-HEEWFRIDDSTVIPVKLERVLSEEAYMLLYARHS 267
             N  + +W+  DD  V  V    V + EAY+L Y + S
Sbjct:   620 NVINGQWYEFDDQYVTEVHETVVQNAEAYVLFYRKSS 656

 Score = 64 (27.6 bits), Expect = 3.1e-18, Sum P(3) = 3.1e-18
 Identities = 19/67 (28%), Positives = 29/67 (43%)

Query:    69 GAKGKIAEETTLIGLTFGGYLRSKIKCLKCLGKSELYERMMDLTVEIDG--DIGTLEEAL 126
             G K       ++I   F G + S ++CL C   S   E   DL++ I G  D+  L   +
Sbjct:   403 GKKRSEVRYRSVISDIFDGSILSLVQCLTCDRVSTTIETFQDLSLPIPGKEDLAKLHSTI 462

Query:   127 AQFTASE 133
              Q   S+
Sbjct:   463 HQSAVSK 469

 Score = 57 (25.1 bits), Expect = 3.1e-18, Sum P(3) = 3.1e-18
 Identities = 19/66 (28%), Positives = 30/66 (45%)

Query:     2 PGLHSTFDVVSCLILNAKDGSYPVSPIGILSKIQKIGSHLGHGREEDAHEFLRCAVDTMQ 61
             P L  ++  +   + + K  SY V P  +   I+ I        ++D  EFLRC +D + 
Sbjct:   186 PALCKSYQKLISELWHKKRPSYVV-PSSLYHGIKLINPLFRGYSQQDTQEFLRCLMDQLH 244

Query:    62 SVCLKE 67
                LKE
Sbjct:   245 EE-LKE 249


>UNIPROTKB|B1WBD7 [details] [associations]
            symbol:usp20 "Ubiquitin carboxyl-terminal hydrolase 20"
            species:8355 "Xenopus laevis" [GO:0004197 "cysteine-type
            endopeptidase activity" evidence=ISS] [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=ISS] [GO:0008277 "regulation of
            G-protein coupled receptor protein signaling pathway" evidence=ISS]
            [GO:0016579 "protein deubiquitination" evidence=ISS] [GO:0070536
            "protein K63-linked deubiquitination" evidence=ISS] [GO:0071108
            "protein K48-linked deubiquitination" evidence=ISS]
            InterPro:IPR001394 InterPro:IPR001607 InterPro:IPR006615
            InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 Pfam:PF06337
            PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271
            PROSITE:PS51283 SMART:SM00695 GO:GO:0048471 GO:GO:0046872
            GO:GO:0008270 GO:GO:0006897 Gene3D:3.30.40.10 InterPro:IPR013083
            GO:GO:0006511 GO:GO:0008277 GO:GO:0071108 GO:GO:0070536
            GO:GO:0004197 GO:GO:0004221 CTD:10868 HOVERGEN:HBG054196 KO:K11848
            EMBL:BC161716 RefSeq:NP_001121345.1 UniGene:Xl.16107
            ProteinModelPortal:B1WBD7 SMR:B1WBD7 GeneID:100158436
            KEGG:xla:100158436 Xenbase:XB-GENE-966533 Uniprot:B1WBD7
        Length = 840

 Score = 218 (81.8 bits), Expect = 3.2e-18, Sum P(3) = 3.2e-18
 Identities = 58/157 (36%), Positives = 81/157 (51%)

Query:   117 GDIGTLEEALAQFTASEILVGENKYYCSRCKSYEKAKKKLTVLEEPNILTIVLKRFESG- 175
             G + TLE+ LA F A++ L G+N Y C RCK      K   VL  P +L I LKRF    
Sbjct:   460 GPMITLEDCLAAFFAADELKGDNMYSCERCKKLRNGVKYCKVLRLPEVLCIHLKRFRHEV 519

Query:   176 --NFGKLNKSVWFP-EVLNMAPYMSRTGDGS-PMYSLYAVVVHLDVTNATFSGHYVCYVK 231
               +F K+   V FP E LN+ P++++        Y L AV+ H     +  SGHY+ Y +
Sbjct:   520 MYSF-KIGSHVSFPLEGLNLRPFLAKECVSRITTYDLLAVICH---HGSASSGHYISYCQ 575

Query:   232 NS-HEEWFRIDDSTVIPVKLERVLSEEAYMLLYARHS 267
             N  + +W+  DD  V  V    V + EAY+L Y + S
Sbjct:   576 NVINGQWYEFDDQYVTEVHETVVQNAEAYVLFYRKSS 612

 Score = 64 (27.6 bits), Expect = 3.2e-18, Sum P(3) = 3.2e-18
 Identities = 19/64 (29%), Positives = 28/64 (43%)

Query:    69 GAKGKIAEETTLIGLTFGGYLRSKIKCLKCLGKSELYERMMDLTVEIDG--DIGTLEEAL 126
             G K       ++I   F G + S ++CL C   S   E   DL++ I G  D+  L   +
Sbjct:   359 GKKRSEVRYRSVISDIFDGSILSLVQCLTCDRVSTTIETFQDLSLPIPGKEDLAKLHSTI 418

Query:   127 AQFT 130
              Q T
Sbjct:   419 HQST 422

 Score = 57 (25.1 bits), Expect = 3.2e-18, Sum P(3) = 3.2e-18
 Identities = 19/66 (28%), Positives = 30/66 (45%)

Query:     2 PGLHSTFDVVSCLILNAKDGSYPVSPIGILSKIQKIGSHLGHGREEDAHEFLRCAVDTMQ 61
             P L  ++  +   + + K  SY V P  +   I+ I        ++D  EFLRC +D + 
Sbjct:   142 PALCKSYQKLVSELWHKKRPSYVV-PSSLYHGIKLINPLFRGYSQQDTQEFLRCLMDQLH 200

Query:    62 SVCLKE 67
                LKE
Sbjct:   201 EE-LKE 205


>UNIPROTKB|P0C8Z3 [details] [associations]
            symbol:USP22 "Ubiquitin carboxyl-terminal hydrolase 22"
            species:9913 "Bos taurus" [GO:0045931 "positive regulation of
            mitotic cell cycle" evidence=IEA] [GO:0045893 "positive regulation
            of transcription, DNA-dependent" evidence=IEA] [GO:0030374
            "ligand-dependent nuclear receptor transcription coactivator
            activity" evidence=IEA] [GO:0016578 "histone deubiquitination"
            evidence=IEA] [GO:0016574 "histone ubiquitination" evidence=IEA]
            [GO:0010485 "H4 histone acetyltransferase activity" evidence=IEA]
            [GO:0004843 "ubiquitin-specific protease activity" evidence=IEA]
            [GO:0000124 "SAGA complex" evidence=IEA] [GO:0007049 "cell cycle"
            evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
            [GO:0006511 "ubiquitin-dependent protein catabolic process"
            evidence=IEA] [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=IEA] InterPro:IPR001394 InterPro:IPR001607
            InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271 GO:GO:0045893
            GO:GO:0046872 GO:GO:0045931 GO:GO:0008270 GO:GO:0006351
            GO:GO:0007049 GO:GO:0000124 Gene3D:3.30.40.10 InterPro:IPR013083
            GO:GO:0006511 GO:GO:0030374 GO:GO:0016578 GO:GO:0004843
            GO:GO:0004221 GO:GO:0016574 GO:GO:0010485 eggNOG:COG5533 KO:K11366
            GeneTree:ENSGT00690000101718 HOGENOM:HOG000007260 EMBL:EE333442
            EMBL:EH202007 EMBL:EV691513 IPI:IPI00707759 RefSeq:NP_001160039.1
            UniGene:Bt.12486 Ensembl:ENSBTAT00000011818 GeneID:509694
            KEGG:bta:509694 CTD:23326 HOVERGEN:HBG058014 OMA:DMEMIAK
            OrthoDB:EOG48PMJS NextBio:20869082 ArrayExpress:P0C8Z3
            Uniprot:P0C8Z3
        Length = 514

 Score = 190 (71.9 bits), Expect = 3.4e-18, Sum P(2) = 3.4e-18
 Identities = 49/157 (31%), Positives = 78/157 (49%)

Query:   121 TLEEALAQFTASEILVGENKYYCSRCKSYEKAKKKLTVLEEPNILTIVLKRFE-SGNFG- 178
             TL + L +FT  E L    K  CS C SY+++ K+LT+ + P +    LKRFE S     
Sbjct:   350 TLTDCLRRFTRPEHLGSSAKIKCSGCHSYQESTKQLTMKKLPIVACFHLKRFEHSAKLRR 409

Query:   179 KLNKSVWFPEVLNMAPYMSRTGDG-------SPMYSL-----YAVVVHLDVTNATFSGHY 226
             K+   V FP  L+M P+M+ + +         P  SL     Y++   ++      SGHY
Sbjct:   410 KITTYVSFPLELDMTPFMASSKESRMNGQYQQPTDSLNNDNKYSLFAVVNHQGTLESGHY 469

Query:   227 VCYVKNSHEEWFRIDDSTVIPVKLERVLSEEAYMLLY 263
               +++   ++WF+ DD+ +    +  VL  E Y+L Y
Sbjct:   470 TSFIRQHKDQWFKCDDAIITKASIADVLDSEGYLLFY 506

 Score = 104 (41.7 bits), Expect = 3.4e-18, Sum P(2) = 3.4e-18
 Identities = 32/118 (27%), Positives = 53/118 (44%)

Query:    24 PVSPIGILSKIQKIGSHLGHGREEDAHEFLRCAVDTMQSVCL-KEFGAKGKIAEETT-LI 81
             P  P  +L  +     HL    ++DAHEFL  A+D +   C   + G K         +I
Sbjct:   227 PHIPYKLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCKGDDNGKKANNPNHCNCII 286

Query:    82 GLTFGGYLRSKIKCLKCLGKSELYERMMDLTVEIDGDIGTLEEALAQFTASEILVGEN 139
                F G L+S + C  C G S   +   D+++++ G   T    L+  + S ++ GE+
Sbjct:   287 DQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPGS-STPFWPLSPGSESSVVNGES 343


>SGD|S000000900 [details] [associations]
            symbol:UBP9 "Ubiquitin-specific protease that cleaves
            ubiquitin-protein fusions" species:4932 "Saccharomyces cerevisiae"
            [GO:0004843 "ubiquitin-specific protease activity" evidence=TAS]
            [GO:0016579 "protein deubiquitination" evidence=TAS] [GO:0005737
            "cytoplasm" evidence=IC] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0006508 "proteolysis"
            evidence=IEA] [GO:0008234 "cysteine-type peptidase activity"
            evidence=IEA] [GO:0008233 "peptidase activity" evidence=IEA]
            [GO:0016787 "hydrolase activity" evidence=IEA] [GO:0004221
            "ubiquitin thiolesterase activity" evidence=IEA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 SGD:S000000900 GO:GO:0005737 EMBL:BK006939
            GO:GO:0006511 EMBL:U18839 GO:GO:0004843 GO:GO:0016579 GO:GO:0004221
            KO:K11872 OrthoDB:EOG43XZCS eggNOG:COG5077
            GeneTree:ENSGT00650000093027 HOGENOM:HOG000141813 PIR:S50601
            RefSeq:NP_011024.1 ProteinModelPortal:P39967 SMR:P39967
            DIP:DIP-6551N IntAct:P39967 MINT:MINT-688224 STRING:P39967
            MEROPS:C19.A20 PRIDE:P39967 EnsemblFungi:YER098W GeneID:856835
            KEGG:sce:YER098W CYGD:YER098w OMA:NDEAINI NextBio:983138
            Genevestigator:P39967 GermOnline:YER098W Uniprot:P39967
        Length = 754

 Score = 250 (93.1 bits), Expect = 3.4e-18, P = 3.4e-18
 Identities = 69/238 (28%), Positives = 114/238 (47%)

Query:    25 VSPIGILSKIQKIGSHLGHGREEDAHEFLRCAVDTMQSVCLKE-----FGAKGKIAEETT 79
             VSP   +  ++K         ++DAHEFL   ++       +      FG +        
Sbjct:   412 VSPTEFVKILKKENVLFNTMMQQDAHEFLNFLLNDFSEYIQRNNPRMRFGPQKTDNSNDN 471

Query:    80 LIGLTFGGYLRSKIKCLKCLGKSELYERMMDLTVEIDGDIGT-LEEALAQFTASEILVGE 138
              I   F G L ++IKCL C   +   E  +D  +E+ GD  T +++ L  +   E+L G 
Sbjct:   472 FITDLFKGTLTNRIKCLTCDNITSRDEPFLDFPIEVQGDEETDIQKMLKSYHQREMLNGV 531

Query:   139 NKYYCSRCKSYEKAKKKLTVLEEPNILTIVLKRFESGNFGKLNKSVWFPEVLNMAPYMSR 198
             NK+YC++C   ++A++ + + + P+IL++ LKRF+     K N  ++   +  +   +S 
Sbjct:   532 NKFYCNKCYGLQEAERMVGLKQLPHILSLHLKRFKYSEEQKSNIKLFNKILYPLTLDVSS 591

Query:   199 TGDGS--PMYSLYAVVVHLDVTNATFSGHYVCYVKNSHEEWFRIDDSTVIPVKLERVL 254
             T + S    Y L  VV+H+   +    GHYVC  +N    W   DD TV  +K E VL
Sbjct:   592 TFNTSVYKKYELSGVVIHMG--SGPQHGHYVCICRNEKFGWLLYDDETVESIKEETVL 647


>UNIPROTKB|Q5R5Z6 [details] [associations]
            symbol:USP20 "Ubiquitin carboxyl-terminal hydrolase 20"
            species:9601 "Pongo abelii" [GO:0004197 "cysteine-type
            endopeptidase activity" evidence=ISS] [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=ISS] [GO:0008277 "regulation of
            G-protein coupled receptor protein signaling pathway" evidence=ISS]
            [GO:0016579 "protein deubiquitination" evidence=ISS] [GO:0070536
            "protein K63-linked deubiquitination" evidence=ISS] [GO:0071108
            "protein K48-linked deubiquitination" evidence=ISS]
            InterPro:IPR001394 InterPro:IPR001607 InterPro:IPR006615
            InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 Pfam:PF06337
            PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271
            PROSITE:PS51283 SMART:SM00695 GO:GO:0048471 GO:GO:0046872
            GO:GO:0008270 GO:GO:0006897 Gene3D:3.30.40.10 InterPro:IPR013083
            GO:GO:0006511 GO:GO:0008277 GO:GO:0071108 GO:GO:0070536
            GO:GO:0004197 GO:GO:0004221 CTD:10868 HOGENOM:HOG000286031
            HOVERGEN:HBG054196 KO:K11848 EMBL:CR860704 RefSeq:NP_001126647.1
            UniGene:Pab.18678 ProteinModelPortal:Q5R5Z6 SMR:Q5R5Z6
            GeneID:100173645 KEGG:pon:100173645 InParanoid:Q5R5Z6
            Uniprot:Q5R5Z6
        Length = 913

 Score = 219 (82.2 bits), Expect = 3.5e-18, Sum P(3) = 3.5e-18
 Identities = 57/157 (36%), Positives = 80/157 (50%)

Query:   117 GDIGTLEEALAQFTASEILVGENKYYCSRCKSYEKAKKKLTVLEEPNILTIVLKRFESG- 175
             G + TLE+ LA F A++ L G+N Y C RCK      K   VL  P IL I LKRF    
Sbjct:   533 GPVVTLEDCLAAFFAADELKGDNMYSCERCKKLRNGVKYCKVLRLPEILCIHLKRFRHEV 592

Query:   176 --NFGKLNKSVWFP-EVLNMAPYMSRTGDGS-PMYSLYAVVVHLDVTNATFSGHYVCYVK 231
               +F K+N  V FP E L++ P++++        Y L +V+ H        SGHY+ Y +
Sbjct:   593 MYSF-KINSHVSFPLEGLDLRPFLAKECTSQITTYDLLSVICHHGTAG---SGHYIAYCQ 648

Query:   232 NS-HEEWFRIDDSTVIPVKLERVLSEEAYMLLYARHS 267
             N  + +W+  DD  V  V    V + E Y+L Y + S
Sbjct:   649 NVINGQWYEFDDQYVTEVHETVVQNAEGYVLFYRKSS 685

 Score = 63 (27.2 bits), Expect = 3.5e-18, Sum P(3) = 3.5e-18
 Identities = 17/52 (32%), Positives = 26/52 (50%)

Query:    79 TLIGLTFGGYLRSKIKCLKCLGKSELYERMMDLTVEIDG--DIGTLEEALAQ 128
             ++I   F G + S ++CL C   S   E   DL++ I G  D+  L  A+ Q
Sbjct:   442 SVISDIFDGSILSLVQCLTCDRVSATVETFQDLSLPIPGKEDLAKLHSAIYQ 493

 Score = 58 (25.5 bits), Expect = 3.5e-18, Sum P(3) = 3.5e-18
 Identities = 18/66 (27%), Positives = 30/66 (45%)

Query:     2 PGLHSTFDVVSCLILNAKDGSYPVSPIGILSKIQKIGSHLGHGREEDAHEFLRCAVDTMQ 61
             P L  ++  +   + + K  SY V P  +   I+ +        ++D  EFLRC +D + 
Sbjct:   185 PALCKSYQKLVSEVWHKKRPSYVV-PTSLSHGIKLVNPMFRGYAQQDTQEFLRCLMDQLH 243

Query:    62 SVCLKE 67
                LKE
Sbjct:   244 EE-LKE 248


>UNIPROTKB|Q9Y2K6 [details] [associations]
            symbol:USP20 "Ubiquitin carboxyl-terminal hydrolase 20"
            species:9606 "Homo sapiens" [GO:0006511 "ubiquitin-dependent
            protein catabolic process" evidence=IEA] [GO:0008270 "zinc ion
            binding" evidence=IEA] [GO:0006897 "endocytosis" evidence=IEA]
            [GO:0048471 "perinuclear region of cytoplasm" evidence=IEA]
            [GO:0005575 "cellular_component" evidence=ND] [GO:0004221
            "ubiquitin thiolesterase activity" evidence=IDA] [GO:0070536
            "protein K63-linked deubiquitination" evidence=IDA] [GO:0004197
            "cysteine-type endopeptidase activity" evidence=IMP] [GO:0008277
            "regulation of G-protein coupled receptor protein signaling
            pathway" evidence=IMP] [GO:0001664 "G-protein coupled receptor
            binding" evidence=IPI] [GO:0016579 "protein deubiquitination"
            evidence=IDA] [GO:0071108 "protein K48-linked deubiquitination"
            evidence=IDA] InterPro:IPR001394 InterPro:IPR001607
            InterPro:IPR006615 InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148
            Pfam:PF06337 PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235
            PROSITE:PS50271 PROSITE:PS51283 SMART:SM00695 GO:GO:0048471
            GO:GO:0046872 GO:GO:0008270 EMBL:CH471090 GO:GO:0006897
            Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511 GO:GO:0008277
            GO:GO:0071108 GO:GO:0070536 GO:GO:0004197 GO:GO:0004221
            EMBL:AL158207 eggNOG:COG5560 CTD:10868 HOGENOM:HOG000286031
            HOVERGEN:HBG054196 KO:K11848 OMA:ADYGQIS OrthoDB:EOG4D52WZ
            EMBL:AY074877 EMBL:AB023220 EMBL:BC039593 EMBL:Y17457 EMBL:Y17459
            IPI:IPI00328285 RefSeq:NP_001008563.2 RefSeq:NP_001103773.2
            RefSeq:NP_006667.3 UniGene:Hs.5452 ProteinModelPortal:Q9Y2K6
            SMR:Q9Y2K6 IntAct:Q9Y2K6 STRING:Q9Y2K6 MEROPS:C19.025
            PhosphoSite:Q9Y2K6 DMDM:116242837 PRIDE:Q9Y2K6
            Ensembl:ENST00000315480 Ensembl:ENST00000358355
            Ensembl:ENST00000372429 GeneID:10868 KEGG:hsa:10868 UCSC:uc004byr.2
            GeneCards:GC09P132596 H-InvDB:HIX0008459 HGNC:HGNC:12619
            HPA:HPA006287 neXtProt:NX_Q9Y2K6 PharmGKB:PA37245 InParanoid:Q9Y2K6
            PhylomeDB:Q9Y2K6 ChiTaRS:USP20 GenomeRNAi:10868 NextBio:41265
            ArrayExpress:Q9Y2K6 Bgee:Q9Y2K6 CleanEx:HS_USP20
            Genevestigator:Q9Y2K6 GermOnline:ENSG00000136878 Uniprot:Q9Y2K6
        Length = 914

 Score = 219 (82.2 bits), Expect = 3.5e-18, Sum P(3) = 3.5e-18
 Identities = 57/157 (36%), Positives = 80/157 (50%)

Query:   117 GDIGTLEEALAQFTASEILVGENKYYCSRCKSYEKAKKKLTVLEEPNILTIVLKRFESG- 175
             G + TLE+ LA F A++ L G+N Y C RCK      K   VL  P IL I LKRF    
Sbjct:   534 GPVVTLEDCLAAFFAADELKGDNMYSCERCKKLRNGVKYCKVLRLPEILCIHLKRFRHEV 593

Query:   176 --NFGKLNKSVWFP-EVLNMAPYMSRTGDGS-PMYSLYAVVVHLDVTNATFSGHYVCYVK 231
               +F K+N  V FP E L++ P++++        Y L +V+ H        SGHY+ Y +
Sbjct:   594 MYSF-KINSHVSFPLEGLDLRPFLAKECTSQITTYDLLSVICHHGTAG---SGHYIAYCQ 649

Query:   232 NS-HEEWFRIDDSTVIPVKLERVLSEEAYMLLYARHS 267
             N  + +W+  DD  V  V    V + E Y+L Y + S
Sbjct:   650 NVINGQWYEFDDQYVTEVHETVVQNAEGYVLFYRKSS 686

 Score = 63 (27.2 bits), Expect = 3.5e-18, Sum P(3) = 3.5e-18
 Identities = 17/52 (32%), Positives = 26/52 (50%)

Query:    79 TLIGLTFGGYLRSKIKCLKCLGKSELYERMMDLTVEIDG--DIGTLEEALAQ 128
             ++I   F G + S ++CL C   S   E   DL++ I G  D+  L  A+ Q
Sbjct:   443 SVISDIFDGSILSLVQCLTCDRVSTTVETFQDLSLPIPGKEDLAKLHSAIYQ 494

 Score = 58 (25.5 bits), Expect = 3.5e-18, Sum P(3) = 3.5e-18
 Identities = 18/66 (27%), Positives = 30/66 (45%)

Query:     2 PGLHSTFDVVSCLILNAKDGSYPVSPIGILSKIQKIGSHLGHGREEDAHEFLRCAVDTMQ 61
             P L  ++  +   + + K  SY V P  +   I+ +        ++D  EFLRC +D + 
Sbjct:   186 PALCKSYQKLVSEVWHKKRPSYVV-PTSLSHGIKLVNPMFRGYAQQDTQEFLRCLMDQLH 244

Query:    62 SVCLKE 67
                LKE
Sbjct:   245 EE-LKE 249


>UNIPROTKB|Q70EK9 [details] [associations]
            symbol:USP51 "Ubiquitin carboxyl-terminal hydrolase 51"
            species:9606 "Homo sapiens" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0008270 "zinc ion binding"
            evidence=IEA] [GO:0008234 "cysteine-type peptidase activity"
            evidence=IEA] InterPro:IPR001394 InterPro:IPR001607
            InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271 GO:GO:0046872
            GO:GO:0008270 GO:GO:0008234 Gene3D:3.30.40.10 InterPro:IPR013083
            GO:GO:0006511 GO:GO:0004221 KO:K11366 HOGENOM:HOG000007260
            HOVERGEN:HBG058014 OrthoDB:EOG48PMJS EMBL:AJ583823 EMBL:AL732358
            EMBL:BC035907 EMBL:BN000340 IPI:IPI00398738 RefSeq:NP_958443.1
            UniGene:Hs.40061 UniGene:Hs.607524 ProteinModelPortal:Q70EK9
            SMR:Q70EK9 MEROPS:C19.065 PhosphoSite:Q70EK9 DMDM:52000873
            PRIDE:Q70EK9 DNASU:158880 Ensembl:ENST00000500968 GeneID:158880
            KEGG:hsa:158880 UCSC:uc004dun.2 CTD:158880 GeneCards:GC0XM055511
            HGNC:HGNC:23086 HPA:HPA001942 neXtProt:NX_Q70EK9
            PharmGKB:PA134888611 InParanoid:Q70EK9 OMA:FISFPLE PhylomeDB:Q70EK9
            GenomeRNAi:158880 NextBio:87839 Bgee:Q70EK9 CleanEx:HS_USP51
            Genevestigator:Q70EK9 GermOnline:ENSG00000185295 Uniprot:Q70EK9
        Length = 711

 Score = 206 (77.6 bits), Expect = 3.7e-18, Sum P(2) = 3.7e-18
 Identities = 58/173 (33%), Positives = 87/173 (50%)

Query:   110 DLTVEIDGDI-G--TLEEALAQFTASEILVGENKYYCSRCKSYEKAKKKLTVLEEPNILT 166
             D TV  D  I G  +L + L  FT  E L    K  C+ C+SY+++ K+LT+ + P +  
Sbjct:   534 DSTVSRDDHIPGIPSLTDCLQWFTRPEHLGSSAKIKCNSCQSYQESTKQLTMKKLPIVAC 593

Query:   167 IVLKRFES-GNFG-KLNKSVWFPEVLNMAPYM-----SRTGDGSP---------MYSLYA 210
               LKRFE  G    K+N  + FP  L+M P++     SR  +G P          YSL+A
Sbjct:   594 FHLKRFEHVGKQRRKINTFISFPLELDMTPFLASTKESRMKEGQPPTDCVPNENKYSLFA 653

Query:   211 VVVHLDVTNATFSGHYVCYVKNSHEEWFRIDDSTVIPVKLERVLSEEAYMLLY 263
             V+ H        SGHY  +++   ++WF  DD+ +    +E +L  E Y+L Y
Sbjct:   654 VINHHGTLE---SGHYTSFIRQQKDQWFSCDDAIITKATIEDLLYSEGYLLFY 703

 Score = 91 (37.1 bits), Expect = 3.7e-18, Sum P(2) = 3.7e-18
 Identities = 28/104 (26%), Positives = 45/104 (43%)

Query:    24 PVSPIGILSKIQKIGSHLGHGREEDAHEFLRCAVDTMQSVCLKEFGAKGKIAEETT---- 79
             P  P  +L  I     HL   R++DAHEFL   +D +      + G  G+ A        
Sbjct:   425 PHIPYKLLHLIWIHAEHLAGYRQQDAHEFLIAILDVLHRHSKDDSG--GQEANNPNCCNC 482

Query:    80 LIGLTFGGYLRSKIKCLKCLGKSELYERMMDLTVEIDGDIGTLE 123
             +I   F G L+S + C  C   S   +   D+++++ G   T +
Sbjct:   483 IIDQIFTGGLQSDVTCQACHSVSTTIDPCWDISLDLPGSCATFD 526


>UNIPROTKB|C0HB46 [details] [associations]
            symbol:usp12 "Ubiquitin carboxyl-terminal hydrolase 12"
            species:8030 "Salmo salar" [GO:0004197 "cysteine-type endopeptidase
            activity" evidence=ISS] [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=ISS] [GO:0004843 "ubiquitin-specific protease
            activity" evidence=ISS] [GO:0016579 "protein deubiquitination"
            evidence=ISS] InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443
            PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 GO:GO:0006511
            GO:GO:0004197 GO:GO:0004843 GO:GO:0016579 GO:GO:0004221
            EMBL:BT044911 EMBL:BT059552 RefSeq:NP_001133405.1 UniGene:Ssa.17383
            GeneID:100194904 CTD:100194904 Uniprot:C0HB46
        Length = 372

 Score = 241 (89.9 bits), Expect = 3.7e-18, P = 3.7e-18
 Identities = 79/271 (29%), Positives = 131/271 (48%)

Query:    15 ILNAKDGSYPVSPIGILSKIQKIGSHLGHGREEDAHEFLRCAVDTMQSVCL---KEFGAK 71
             I N K     + P   +++++K      +  ++DAHEFL   ++T+  +     K+    
Sbjct:    91 IANQKRKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLLNTIADLLQEERKQDKTN 150

Query:    72 GKIAE--------------ETTLIGLTFGGYLRSKIKCLKCLGKSELYERMMDLTVEIDG 117
             G++A                +T +   F G L ++ +CL C   S   E  +DL+V+++ 
Sbjct:   151 GRLANGSLDSQNHNSNAPPPSTWVHEIFQGTLTNETRCLTCETISSKDEDFLDLSVDVEQ 210

Query:   118 DIGTLEEALAQFTASEILVGENKYYCSRCKSYEKAKKKLTVLEEPNILTIVLKRF----E 173
             +  ++   L  F+ +E L  E KYYC  C+S ++A K++ V + P IL + LKRF    +
Sbjct:   211 NT-SITHCLRGFSNTETLCSEYKYYCEECRSKQEAHKRMRVKKLPMILALHLKRFKYMEQ 269

Query:   174 SGNFGKLNKSVWFPEVLNMAPYMSRTGDGS-P--MYSLYAVVVHLDVTNATFSGHYVCYV 230
                + KL+  V FP  L +    + +GD + P  +Y L AVVVH    +    GHY+  V
Sbjct:   270 LQRYTKLSYRVVFPLELRL---FNTSGDATNPERLYDLVAVVVHCG--SGPNRGHYIAIV 324

Query:   231 KNSHEEWFRIDDSTVIPVKLERVLSEEAYML 261
             K SH+ W   DD  V  +  + +  EE Y L
Sbjct:   325 K-SHDFWLLFDDDIVEKIDAQAI--EEFYGL 352


>RGD|621073 [details] [associations]
            symbol:Usp2 "ubiquitin specific peptidase 2" species:10116
            "Rattus norvegicus" [GO:0000122 "negative regulation of
            transcription from RNA polymerase II promoter"
            evidence=IEA;ISO;ISS] [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA;ISO;ISS;IMP] [GO:0005634 "nucleus"
            evidence=IEA;IDA] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813
            "centrosome" evidence=IDA] [GO:0005938 "cell cortex"
            evidence=IEA;ISO] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0007049 "cell cycle"
            evidence=IEA] [GO:0007517 "muscle organ development" evidence=IEA]
            [GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
            [GO:0016579 "protein deubiquitination" evidence=IEA;ISO;ISS;IDA]
            [GO:0030332 "cyclin binding" evidence=IEA;ISO] [GO:0031625
            "ubiquitin protein ligase binding" evidence=IEA;ISO] [GO:0042802
            "identical protein binding" evidence=IEA;ISO] [GO:0045931 "positive
            regulation of mitotic cell cycle" evidence=IEA;ISO;ISS] [GO:0046872
            "metal ion binding" evidence=IEA] [GO:0048471 "perinuclear region
            of cytoplasm" evidence=IEA;ISO;IDA] [GO:0048642 "negative
            regulation of skeletal muscle tissue development" evidence=IDA]
            [GO:0048643 "positive regulation of skeletal muscle tissue
            development" evidence=IDA] [GO:0050821 "protein stabilization"
            evidence=IEA;ISO;ISS] InterPro:IPR001394 InterPro:IPR018200
            Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235
            RGD:621073 GO:GO:0005938 GO:GO:0005634 GO:GO:0005813 GO:GO:0048471
            GO:GO:0050821 GO:GO:0046872 GO:GO:0045931 GO:GO:0008234
            GO:GO:0000122 GO:GO:0007049 GO:GO:0007517 GO:GO:0006511
            EMBL:CH473975 GO:GO:0016579 GO:GO:0004221 GO:GO:0048643
            eggNOG:COG5533 HSSP:Q93009 GO:GO:0048642 HOGENOM:HOG000231498
            HOVERGEN:HBG011164 KO:K11833 GeneTree:ENSGT00670000098024
            MEROPS:C19.013 CTD:9099 OrthoDB:EOG47M1XH OMA:SASHRSY EMBL:AF202453
            EMBL:AF202454 EMBL:AF106658 EMBL:AF106659 EMBL:BC085719
            IPI:IPI00213304 IPI:IPI00213307 RefSeq:NP_446226.2
            UniGene:Rn.203590 ProteinModelPortal:Q5U349 SMR:Q5U349
            DIP:DIP-48683N STRING:Q5U349 Ensembl:ENSRNOT00000009975
            Ensembl:ENSRNOT00000036051 GeneID:115771 KEGG:rno:115771
            UCSC:RGD:621073 InParanoid:Q9R083 NextBio:618951
            ArrayExpress:Q5U349 Genevestigator:Q5U349 Uniprot:Q5U349
        Length = 618

 Score = 239 (89.2 bits), Expect = 4.1e-18, Sum P(2) = 4.1e-18
 Identities = 65/203 (32%), Positives = 104/203 (51%)

Query:    74 IAEETTLIGLTFGGYLRSKIKCLKCLGKSELYERMMDLTVEID--G--DIGTLEEALAQF 129
             +  E + IG  F G L+S + C  C   S +++   DL++ I   G  ++ TL + +  F
Sbjct:   417 LEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEV-TLMDCMRLF 475

Query:   130 TASEILVGENKYYCSRCKSYEKAKKKLTVLEEPNILTIVLKRFESGNF--GKLNKSVWFP 187
             T  ++L G+ K  C RC++ ++  KK +V   P IL + LKRF        KL   V FP
Sbjct:   476 TKEDVLDGDEKPTCCRCRARKRCIKKFSVQRFPKILVLHLKRFSESRIRTSKLTTFVNFP 535

Query:   188 -EVLNMAPYMSRTGDGSPMYSLYAVVVHLDVTNATFSGHYVCYVKNSHE-EWFRIDDSTV 245
                L++  + S   + + +Y+LYAV  H   +  T  GHY  Y ++    EW   +DS+V
Sbjct:   536 LRDLDLREFASENTNHA-VYNLYAVSNH---SGTTMGGHYTAYCRSPVTGEWHTFNDSSV 591

Query:   246 IPVKLERVLSEEAYMLLYARHSP 268
              P+   +V + +AY+L Y   SP
Sbjct:   592 TPMSSSQVRTSDAYLLFYELASP 614

 Score = 52 (23.4 bits), Expect = 4.1e-18, Sum P(2) = 4.1e-18
 Identities = 15/54 (27%), Positives = 27/54 (50%)

Query:    25 VSPIGILSKIQKIGSHLGHGREEDAHEFLRCAVDTMQSVCLKEFGAKGKIAEET 78
             VSP    ++IQ+         ++DA EFLR  +D + +  +    A+ K + E+
Sbjct:   347 VSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHNE-VNRVAARPKPSPES 399


>UNIPROTKB|Q5U349 [details] [associations]
            symbol:Usp2 "Ubiquitin carboxyl-terminal hydrolase 2"
            species:10116 "Rattus norvegicus" [GO:0005938 "cell cortex"
            evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
            process" evidence=IEA] [GO:0008234 "cysteine-type peptidase
            activity" evidence=IEA] [GO:0030332 "cyclin binding" evidence=IEA]
            [GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
            [GO:0042802 "identical protein binding" evidence=IEA]
            InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 RGD:621073 GO:GO:0005938
            GO:GO:0005634 GO:GO:0005813 GO:GO:0048471 GO:GO:0050821
            GO:GO:0046872 GO:GO:0045931 GO:GO:0008234 GO:GO:0000122
            GO:GO:0007049 GO:GO:0007517 GO:GO:0006511 EMBL:CH473975
            GO:GO:0016579 GO:GO:0004221 GO:GO:0048643 eggNOG:COG5533
            HSSP:Q93009 GO:GO:0048642 HOGENOM:HOG000231498 HOVERGEN:HBG011164
            KO:K11833 GeneTree:ENSGT00670000098024 MEROPS:C19.013 CTD:9099
            OrthoDB:EOG47M1XH OMA:SASHRSY EMBL:AF202453 EMBL:AF202454
            EMBL:AF106658 EMBL:AF106659 EMBL:BC085719 IPI:IPI00213304
            IPI:IPI00213307 RefSeq:NP_446226.2 UniGene:Rn.203590
            ProteinModelPortal:Q5U349 SMR:Q5U349 DIP:DIP-48683N STRING:Q5U349
            Ensembl:ENSRNOT00000009975 Ensembl:ENSRNOT00000036051 GeneID:115771
            KEGG:rno:115771 UCSC:RGD:621073 InParanoid:Q9R083 NextBio:618951
            ArrayExpress:Q5U349 Genevestigator:Q5U349 Uniprot:Q5U349
        Length = 618

 Score = 239 (89.2 bits), Expect = 4.1e-18, Sum P(2) = 4.1e-18
 Identities = 65/203 (32%), Positives = 104/203 (51%)

Query:    74 IAEETTLIGLTFGGYLRSKIKCLKCLGKSELYERMMDLTVEID--G--DIGTLEEALAQF 129
             +  E + IG  F G L+S + C  C   S +++   DL++ I   G  ++ TL + +  F
Sbjct:   417 LEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEV-TLMDCMRLF 475

Query:   130 TASEILVGENKYYCSRCKSYEKAKKKLTVLEEPNILTIVLKRFESGNF--GKLNKSVWFP 187
             T  ++L G+ K  C RC++ ++  KK +V   P IL + LKRF        KL   V FP
Sbjct:   476 TKEDVLDGDEKPTCCRCRARKRCIKKFSVQRFPKILVLHLKRFSESRIRTSKLTTFVNFP 535

Query:   188 -EVLNMAPYMSRTGDGSPMYSLYAVVVHLDVTNATFSGHYVCYVKNSHE-EWFRIDDSTV 245
                L++  + S   + + +Y+LYAV  H   +  T  GHY  Y ++    EW   +DS+V
Sbjct:   536 LRDLDLREFASENTNHA-VYNLYAVSNH---SGTTMGGHYTAYCRSPVTGEWHTFNDSSV 591

Query:   246 IPVKLERVLSEEAYMLLYARHSP 268
              P+   +V + +AY+L Y   SP
Sbjct:   592 TPMSSSQVRTSDAYLLFYELASP 614

 Score = 52 (23.4 bits), Expect = 4.1e-18, Sum P(2) = 4.1e-18
 Identities = 15/54 (27%), Positives = 27/54 (50%)

Query:    25 VSPIGILSKIQKIGSHLGHGREEDAHEFLRCAVDTMQSVCLKEFGAKGKIAEET 78
             VSP    ++IQ+         ++DA EFLR  +D + +  +    A+ K + E+
Sbjct:   347 VSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHNE-VNRVAARPKPSPES 399


>SGD|S000000163 [details] [associations]
            symbol:UBP13 "Putative ubiquitin-specific protease that
            cleaves Ub-protein fusions" species:4932 "Saccharomyces cerevisiae"
            [GO:0004221 "ubiquitin thiolesterase activity" evidence=IEA]
            [GO:0008150 "biological_process" evidence=ND] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA]
            [GO:0008233 "peptidase activity" evidence=IEA] [GO:0016787
            "hydrolase activity" evidence=IEA] [GO:0005575 "cellular_component"
            evidence=ND] [GO:0004843 "ubiquitin-specific protease activity"
            evidence=TAS] [GO:0008234 "cysteine-type peptidase activity"
            evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
            InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 SGD:S000000163 EMBL:BK006936
            GO:GO:0006511 GO:GO:0004843 GO:GO:0004221 KO:K11872
            OrthoDB:EOG43XZCS eggNOG:COG5077 GeneTree:ENSGT00650000093027
            EMBL:Z35828 PIR:S45803 RefSeq:NP_009486.3 ProteinModelPortal:P38187
            SMR:P38187 DIP:DIP-795N IntAct:P38187 MINT:MINT-2783268
            STRING:P38187 MEROPS:C19.100 PaxDb:P38187 EnsemblFungi:YBL067C
            GeneID:852212 KEGG:sce:YBL067C CYGD:YBL067c HOGENOM:HOG000141813
            OMA:IFGMENF NextBio:970718 Genevestigator:P38187 GermOnline:YBL067C
            Uniprot:P38187
        Length = 747

 Score = 249 (92.7 bits), Expect = 4.4e-18, P = 4.4e-18
 Identities = 85/310 (27%), Positives = 140/310 (45%)

Query:     4 LHSTF-DVVSCLILNAKDGSYPVSPIGILSKIQKIGSHLGHGREEDAHEFLRCAVDTM-- 60
             L+S+  D+  C+  N       VSP   +  +++          +DAHEF    ++ +  
Sbjct:   389 LYSSLRDIFECITENTYLTGV-VSPSSFVDVLKRENVLFNTTMHQDAHEFFNFLLNELSE 447

Query:    61 ------QSVCLKEFGAKGKIAEETTLIGLTFGGYLRSKIKCLKCLGKSELYERMMDLTVE 114
                   + +   +  +  + ++    I   F G L ++IKCL C   +   E  +D  +E
Sbjct:   448 YIERENKKIAASDINSDSEPSKSKNFISDLFQGTLTNQIKCLTCDNITSRDEPFLDFPIE 507

Query:   115 IDGDIGT-LEEALAQFTASEILVGENKYYCSRCKSYEKAKKKLTVLEEPNILTIVLKRF- 172
             + GD  T ++E L  +   E+L G NK+YC  C   ++A++ + + + P+ LT+ LKRF 
Sbjct:   508 VQGDEETDIQEILKSYHQREMLNGSNKFYCDECCGLQEAERLVGLKQLPDTLTLHLKRFK 567

Query:   173 --ESGNFG-KLNKSVWFPEVLNMAPYMSRTGDGSPMYSLYAVVVHLDVTNATFSGHYVCY 229
               E  N   KL  ++ +P  LN+    S        Y L  +VVH+        GHYV  
Sbjct:   568 YSEKQNCNIKLFNNIHYPLTLNVCS--SINSKVCQKYELAGIVVHMG--GGPQHGHYVSL 623

Query:   230 VKNSHEEWFRIDDSTVIPVKLERVLS---EE-----AYMLLY-ARHSPRPPALIRNNVSH 280
              K+    W   DD TV  VK E VL    E      AY+L Y A +S    A+ +N+  +
Sbjct:   624 CKHEKFGWLLFDDETVEAVKEETVLEFTGESPNMATAYVLFYKAMYSN---AVEKNDREN 680

Query:   281 GVKSKKKNLE 290
               K +  N++
Sbjct:   681 MAKEQDDNID 690


>UNIPROTKB|E2RSX3 [details] [associations]
            symbol:USP2 "Ubiquitin carboxyl-terminal hydrolase"
            species:9615 "Canis lupus familiaris" [GO:0050821 "protein
            stabilization" evidence=IEA] [GO:0048471 "perinuclear region of
            cytoplasm" evidence=IEA] [GO:0045931 "positive regulation of
            mitotic cell cycle" evidence=IEA] [GO:0042802 "identical protein
            binding" evidence=IEA] [GO:0031625 "ubiquitin protein ligase
            binding" evidence=IEA] [GO:0030332 "cyclin binding" evidence=IEA]
            [GO:0016579 "protein deubiquitination" evidence=IEA] [GO:0005938
            "cell cortex" evidence=IEA] [GO:0000122 "negative regulation of
            transcription from RNA polymerase II promoter" evidence=IEA]
            [GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
            [GO:0006511 "ubiquitin-dependent protein catabolic process"
            evidence=IEA] [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=IEA] InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443
            PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 GO:GO:0005938
            GO:GO:0048471 GO:GO:0050821 GO:GO:0045931 GO:GO:0008234
            GO:GO:0000122 GO:GO:0006511 GO:GO:0016579 GO:GO:0004221 KO:K11833
            GeneTree:ENSGT00670000098024 CTD:9099 OMA:GFKPGPP EMBL:AAEX03003436
            EMBL:AAEX03003437 RefSeq:XP_859639.1 ProteinModelPortal:E2RSX3
            Ensembl:ENSCAFT00000019129 GeneID:608188 KEGG:cfa:608188
            NextBio:20893859 Uniprot:E2RSX3
        Length = 606

 Score = 239 (89.2 bits), Expect = 4.8e-18, Sum P(2) = 4.8e-18
 Identities = 64/203 (31%), Positives = 104/203 (51%)

Query:    74 IAEETTLIGLTFGGYLRSKIKCLKCLGKSELYERMMDLTVEID--G--DIGTLEEALAQF 129
             +  E + IG  F G L+S + C  C   S +++   DL++ I   G  ++ TL + +  F
Sbjct:   405 LEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEV-TLTDCMRLF 463

Query:   130 TASEILVGENKYYCSRCKSYEKAKKKLTVLEEPNILTIVLKRFESGNF--GKLNKSVWFP 187
             T  ++L G+ K  C RC++ ++  KK ++   P IL + LKRF        KL   V FP
Sbjct:   464 TKEDVLDGDEKPTCCRCRARKRCIKKFSIQRFPKILVLHLKRFSESRIRTSKLTTFVNFP 523

Query:   188 -EVLNMAPYMSRTGDGSPMYSLYAVVVHLDVTNATFSGHYVCYVKNSHE-EWFRIDDSTV 245
                L++  + S   + + +Y+LYAV  H   +  T  GHY  Y ++    EW   +DS+V
Sbjct:   524 LRDLDLREFASENTNHA-VYNLYAVSNH---SGTTMGGHYTAYCRSPVTGEWHTFNDSSV 579

Query:   246 IPVKLERVLSEEAYMLLYARHSP 268
              P+   +V + +AY+L Y   SP
Sbjct:   580 TPMSSSQVRTSDAYLLFYELASP 602

 Score = 51 (23.0 bits), Expect = 4.8e-18, Sum P(2) = 4.8e-18
 Identities = 12/38 (31%), Positives = 20/38 (52%)

Query:    25 VSPIGILSKIQKIGSHLGHGREEDAHEFLRCAVDTMQS 62
             VSP    ++IQ+         ++DA EFLR  +D + +
Sbjct:   335 VSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHN 372


>UNIPROTKB|E1BWB2 [details] [associations]
            symbol:USP33 "Ubiquitin carboxyl-terminal hydrolase"
            species:9031 "Gallus gallus" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0008270 "zinc ion binding"
            evidence=IEA] [GO:0001664 "G-protein coupled receptor binding"
            evidence=IEA] [GO:0004197 "cysteine-type endopeptidase activity"
            evidence=IEA] [GO:0007411 "axon guidance" evidence=IEA] [GO:0008277
            "regulation of G-protein coupled receptor protein signaling
            pathway" evidence=IEA] [GO:0016477 "cell migration" evidence=IEA]
            [GO:0044297 "cell body" evidence=IEA] [GO:0070536 "protein
            K63-linked deubiquitination" evidence=IEA] [GO:0071108 "protein
            K48-linked deubiquitination" evidence=IEA] InterPro:IPR001394
            InterPro:IPR001607 InterPro:IPR006615 InterPro:IPR018200
            Pfam:PF00443 Pfam:PF02148 Pfam:PF06337 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271 PROSITE:PS51283
            SMART:SM00695 GO:GO:0016477 GO:GO:0046872 GO:GO:0008270
            Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511 GO:GO:0008277
            GO:GO:0071108 GO:GO:0070536 GO:GO:0004197 GO:GO:0044297
            GO:GO:0004221 GeneTree:ENSGT00690000101718 KO:K11848 CTD:23032
            EMBL:AADN02012750 IPI:IPI00598742 RefSeq:XP_422389.2
            UniGene:Gga.26668 ProteinModelPortal:E1BWB2
            Ensembl:ENSGALT00000014598 GeneID:424553 KEGG:gga:424553
            NextBio:20826873 Uniprot:E1BWB2
        Length = 910

 Score = 215 (80.7 bits), Expect = 4.9e-18, Sum P(3) = 4.9e-18
 Identities = 54/154 (35%), Positives = 80/154 (51%)

Query:   117 GDIGTLEEALAQFTASEILVGENKYYCSRCKSYEKAKKKLTVLEEPNILTIVLKRFESG- 175
             G + TL++ LA F A + L G+N Y C RCK      K   V + P IL I LKRF    
Sbjct:   532 GPVVTLQDCLAAFFARDELKGDNMYSCGRCKKLRNGVKFCKVQKFPEILCIHLKRFRHEL 591

Query:   176 NFG-KLNKSVWFP-EVLNMAPYMSRTGDGSPM-YSLYAVVVHLDVTNATFSGHYVCYVKN 232
              F  K+   V FP E L++ P++++      + Y L +V+ H    +   SGHY+ Y +N
Sbjct:   592 MFSTKIGTHVSFPLEGLDLQPFLAKDSPAQIVTYDLLSVICHHGTAS---SGHYIAYCRN 648

Query:   233 S-HEEWFRIDDSTVIPVKLERVLSEEAYMLLYAR 265
             + +  W+  DD +V  V    V + EAY+L Y +
Sbjct:   649 NLNNLWYEFDDQSVTEVSESTVQNAEAYVLFYRK 682

 Score = 64 (27.6 bits), Expect = 4.9e-18, Sum P(3) = 4.9e-18
 Identities = 15/43 (34%), Positives = 22/43 (51%)

Query:    25 VSPIGILSKIQKIGSHLGHGREEDAHEFLRCAVDTMQSVCLKE 67
             V P G+   I+ +        ++DA EFLRC +D +    LKE
Sbjct:   215 VVPTGLFQGIKSVNPTFRGYSQQDAQEFLRCLMDLLHEE-LKE 256

 Score = 60 (26.2 bits), Expect = 4.9e-18, Sum P(3) = 4.9e-18
 Identities = 18/58 (31%), Positives = 27/58 (46%)

Query:    73 KIAEETTLIGLTFGGYLRSKIKCLKCLGKSELYERMMDLTVEIDG--DIGTLEEALAQ 128
             K  +  ++I   F G + S ++CL C   S   E   DL++ I G  D+  L  A  Q
Sbjct:   435 KCKKYRSVISDIFDGTIISSVQCLTCDRLSVTLETFQDLSLPIPGKEDLAKLHSASHQ 492


>UNIPROTKB|A7Z056 [details] [associations]
            symbol:USP20 "Ubiquitin carboxyl-terminal hydrolase 20"
            species:9913 "Bos taurus" [GO:0016579 "protein deubiquitination"
            evidence=ISS] [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=ISS] [GO:0070536 "protein K63-linked deubiquitination"
            evidence=ISS] [GO:0008277 "regulation of G-protein coupled receptor
            protein signaling pathway" evidence=ISS] [GO:0004197 "cysteine-type
            endopeptidase activity" evidence=ISS] [GO:0071108 "protein
            K48-linked deubiquitination" evidence=ISS] [GO:0048471 "perinuclear
            region of cytoplasm" evidence=IEA] [GO:0001664 "G-protein coupled
            receptor binding" evidence=IEA] [GO:0006897 "endocytosis"
            evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
            [GO:0006511 "ubiquitin-dependent protein catabolic process"
            evidence=IEA] InterPro:IPR001394 InterPro:IPR001607
            InterPro:IPR006615 InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148
            Pfam:PF06337 PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235
            PROSITE:PS50271 PROSITE:PS51283 SMART:SM00695 GO:GO:0048471
            GO:GO:0046872 GO:GO:0008270 GO:GO:0006897 Gene3D:3.30.40.10
            InterPro:IPR013083 GO:GO:0006511 GO:GO:0008277 GO:GO:0071108
            GO:GO:0070536 GO:GO:0004197 GO:GO:0004221 eggNOG:COG5560
            EMBL:BC153254 IPI:IPI00700030 RefSeq:NP_001098803.1
            UniGene:Bt.26746 ProteinModelPortal:A7Z056 SMR:A7Z056 STRING:A7Z056
            PRIDE:A7Z056 Ensembl:ENSBTAT00000027070 GeneID:505839
            KEGG:bta:505839 CTD:10868 GeneTree:ENSGT00690000101718
            HOGENOM:HOG000286031 HOVERGEN:HBG054196 InParanoid:A7Z056 KO:K11848
            OMA:ADYGQIS OrthoDB:EOG4D52WZ NextBio:20867329 ArrayExpress:A7Z056
            Uniprot:A7Z056
        Length = 912

 Score = 218 (81.8 bits), Expect = 5.8e-18, Sum P(3) = 5.8e-18
 Identities = 57/157 (36%), Positives = 81/157 (51%)

Query:   117 GDIGTLEEALAQFTASEILVGENKYYCSRCKSYEKAKKKLTVLEEPNILTIVLKRFESG- 175
             G + TLE+ LA F A++ L G+N Y C RCK      K   VL  P IL I LKRF    
Sbjct:   532 GPVVTLEDCLAAFFAADELKGDNMYSCERCKKLRNGVKYCKVLRLPEILCIHLKRFRHEV 591

Query:   176 --NFGKLNKSVWFP-EVLNMAPYMSRTGDGS-PMYSLYAVVVHLDVTNATFSGHYVCYVK 231
               +F K++  V FP E L++ P++++        Y L +V+ H        SGHY+ Y +
Sbjct:   592 MYSF-KISSHVSFPLEGLDLRPFLAKECTSQITTYDLLSVICHHGTAG---SGHYIAYCQ 647

Query:   232 NS-HEEWFRIDDSTVIPVKLERVLSEEAYMLLYARHS 267
             N  + +W+  DD  V  V    V + EAY+L Y + S
Sbjct:   648 NVINGQWYEFDDQYVTEVHETVVQNAEAYVLFYRKSS 684

 Score = 62 (26.9 bits), Expect = 5.8e-18, Sum P(3) = 5.8e-18
 Identities = 17/52 (32%), Positives = 26/52 (50%)

Query:    79 TLIGLTFGGYLRSKIKCLKCLGKSELYERMMDLTVEIDG--DIGTLEEALAQ 128
             ++I   F G + S ++CL C   S   E   DL++ I G  D+  L  A+ Q
Sbjct:   441 SVISDIFDGSVLSLVQCLTCDRVSTTVETFQDLSLPIPGKEDLAKLHSAIYQ 492

 Score = 58 (25.5 bits), Expect = 5.8e-18, Sum P(3) = 5.8e-18
 Identities = 18/66 (27%), Positives = 30/66 (45%)

Query:     2 PGLHSTFDVVSCLILNAKDGSYPVSPIGILSKIQKIGSHLGHGREEDAHEFLRCAVDTMQ 61
             P L  ++  +   + + K  SY V P  +   I+ +        ++D  EFLRC +D + 
Sbjct:   186 PALCKSYQKLVSEVWHRKRPSYVV-PTSLSHGIKLVNPMFRGYAQQDTQEFLRCLMDQLH 244

Query:    62 SVCLKE 67
                LKE
Sbjct:   245 EE-LKE 249


>UNIPROTKB|O75604 [details] [associations]
            symbol:USP2 "Ubiquitin carboxyl-terminal hydrolase 2"
            species:9606 "Homo sapiens" [GO:0006511 "ubiquitin-dependent
            protein catabolic process" evidence=IEA] [GO:0007049 "cell cycle"
            evidence=IEA] [GO:0007517 "muscle organ development" evidence=IEA]
            [GO:0046872 "metal ion binding" evidence=IEA] [GO:0005813
            "centrosome" evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA]
            [GO:0042802 "identical protein binding" evidence=IEA] [GO:0048642
            "negative regulation of skeletal muscle tissue development"
            evidence=IEA] [GO:0048643 "positive regulation of skeletal muscle
            tissue development" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
            evidence=IEA] [GO:0016579 "protein deubiquitination" evidence=IDA]
            [GO:0050821 "protein stabilization" evidence=IMP;IDA] [GO:0045931
            "positive regulation of mitotic cell cycle" evidence=IMP]
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=IMP] [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IMP;IDA] [GO:0030332 "cyclin
            binding" evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
            [GO:0031625 "ubiquitin protein ligase binding" evidence=IPI]
            [GO:0004197 "cysteine-type endopeptidase activity" evidence=TAS]
            InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 GO:GO:0005938 GO:GO:0005634
            GO:GO:0005813 GO:GO:0048471 GO:GO:0050821 EMBL:CH471065
            GO:GO:0046872 GO:GO:0045931 GO:GO:0000122 GO:GO:0007049
            GO:GO:0007517 GO:GO:0006511 GO:GO:0004197 GO:GO:0016579
            GO:GO:0004221 GO:GO:0048643 eggNOG:COG5533 GO:GO:0048642 PDB:3NHE
            PDBsum:3NHE PDB:2HD5 PDBsum:2HD5 PDB:2IBI PDB:3V6C PDB:3V6E
            PDBsum:2IBI PDBsum:3V6C PDBsum:3V6E HOGENOM:HOG000231498
            HOVERGEN:HBG011164 KO:K11833 MEROPS:C19.013 CTD:9099
            OrthoDB:EOG47M1XH EMBL:AF079564 EMBL:AF440755 EMBL:AK057225
            EMBL:AK292255 EMBL:EF445044 EMBL:AP003396 EMBL:BC002854
            EMBL:BC002955 EMBL:BC041366 IPI:IPI00216783 IPI:IPI00298910
            IPI:IPI00969446 IPI:IPI00969474 RefSeq:NP_001230688.1
            RefSeq:NP_004196.4 RefSeq:NP_741994.1 UniGene:Hs.524085
            ProteinModelPortal:O75604 SMR:O75604 DIP:DIP-29134N IntAct:O75604
            MINT:MINT-4304073 STRING:O75604 PhosphoSite:O75604 PaxDb:O75604
            PRIDE:O75604 DNASU:9099 Ensembl:ENST00000260187
            Ensembl:ENST00000525735 GeneID:9099 KEGG:hsa:9099 UCSC:uc001pwl.4
            UCSC:uc001pwm.4 GeneCards:GC11M119259 HGNC:HGNC:12618 HPA:HPA006777
            HPA:HPA007222 MIM:604725 neXtProt:NX_O75604 PharmGKB:PA37244
            InParanoid:O75604 OMA:SASHRSY PhylomeDB:O75604 ChEMBL:CHEMBL1293227
            ChiTaRS:USP2 EvolutionaryTrace:O75604 GenomeRNAi:9099 NextBio:34107
            ArrayExpress:O75604 Bgee:O75604 CleanEx:HS_USP2
            Genevestigator:O75604 GermOnline:ENSG00000036672 Uniprot:O75604
        Length = 605

 Score = 238 (88.8 bits), Expect = 6.2e-18, Sum P(2) = 6.2e-18
 Identities = 64/203 (31%), Positives = 103/203 (50%)

Query:    74 IAEETTLIGLTFGGYLRSKIKCLKCLGKSELYERMMDLTVEID--G--DIGTLEEALAQF 129
             +  E + IG  F G L+S + C  C   S +++   DL++ I   G  ++ TL + +  F
Sbjct:   404 LEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEV-TLMDCMRLF 462

Query:   130 TASEILVGENKYYCSRCKSYEKAKKKLTVLEEPNILTIVLKRFESGNF--GKLNKSVWFP 187
             T  ++L G+ K  C RC+  ++  KK ++   P IL + LKRF        KL   V FP
Sbjct:   463 TKEDVLDGDEKPTCCRCRGRKRCIKKFSIQRFPKILVLHLKRFSESRIRTSKLTTFVNFP 522

Query:   188 -EVLNMAPYMSRTGDGSPMYSLYAVVVHLDVTNATFSGHYVCYVKNSHE-EWFRIDDSTV 245
                L++  + S   + + +Y+LYAV  H   +  T  GHY  Y ++    EW   +DS+V
Sbjct:   523 LRDLDLREFASENTNHA-VYNLYAVSNH---SGTTMGGHYTAYCRSPGTGEWHTFNDSSV 578

Query:   246 IPVKLERVLSEEAYMLLYARHSP 268
              P+   +V + +AY+L Y   SP
Sbjct:   579 TPMSSSQVRTSDAYLLFYELASP 601

 Score = 51 (23.0 bits), Expect = 6.2e-18, Sum P(2) = 6.2e-18
 Identities = 12/38 (31%), Positives = 20/38 (52%)

Query:    25 VSPIGILSKIQKIGSHLGHGREEDAHEFLRCAVDTMQS 62
             VSP    ++IQ+         ++DA EFLR  +D + +
Sbjct:   334 VSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHN 371


>UNIPROTKB|Q2KHV7 [details] [associations]
            symbol:USP2 "Ubiquitin carboxyl-terminal hydrolase 2"
            species:9913 "Bos taurus" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=ISS] [GO:0050821 "protein stabilization"
            evidence=ISS] [GO:0045931 "positive regulation of mitotic cell
            cycle" evidence=ISS] [GO:0016579 "protein deubiquitination"
            evidence=ISS] [GO:0000122 "negative regulation of transcription
            from RNA polymerase II promoter" evidence=ISS] [GO:0048471
            "perinuclear region of cytoplasm" evidence=IEA] [GO:0042802
            "identical protein binding" evidence=IEA] [GO:0031625 "ubiquitin
            protein ligase binding" evidence=IEA] [GO:0030332 "cyclin binding"
            evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA] [GO:0046872
            "metal ion binding" evidence=IEA] [GO:0008234 "cysteine-type
            peptidase activity" evidence=IEA] [GO:0007517 "muscle organ
            development" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
            [GO:0006511 "ubiquitin-dependent protein catabolic process"
            evidence=IEA] InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443
            PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 GO:GO:0005938
            GO:GO:0048471 GO:GO:0050821 GO:GO:0046872 GO:GO:0045931
            GO:GO:0008234 GO:GO:0000122 GO:GO:0007049 GO:GO:0007517
            GO:GO:0006511 GO:GO:0016579 GO:GO:0004221 eggNOG:COG5533
            HOVERGEN:HBG011164 KO:K11833 GeneTree:ENSGT00670000098024
            EMBL:BC112866 IPI:IPI00694687 RefSeq:NP_001039728.1
            UniGene:Bt.21721 ProteinModelPortal:Q2KHV7 SMR:Q2KHV7
            MEROPS:C19.013 PRIDE:Q2KHV7 Ensembl:ENSBTAT00000012857
            GeneID:522980 KEGG:bta:522980 CTD:9099 HOGENOM:HOG000048720
            InParanoid:Q2KHV7 OMA:GFKPGPP OrthoDB:EOG47M1XH NextBio:20873641
            Uniprot:Q2KHV7
        Length = 606

 Score = 238 (88.8 bits), Expect = 6.3e-18, Sum P(2) = 6.3e-18
 Identities = 64/203 (31%), Positives = 104/203 (51%)

Query:    74 IAEETTLIGLTFGGYLRSKIKCLKCLGKSELYERMMDLTVEID--G--DIGTLEEALAQF 129
             +  E + IG  F G L+S + C  C   S +++   DL++ I   G  ++ TL + +  F
Sbjct:   405 LEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWDLSLPITKRGYPEV-TLMDCMRLF 463

Query:   130 TASEILVGENKYYCSRCKSYEKAKKKLTVLEEPNILTIVLKRFESGNF--GKLNKSVWFP 187
             T  ++L G+ K  C RC++ ++  KK ++   P IL + LKRF        KL   V FP
Sbjct:   464 TKEDVLDGDEKPTCCRCRARKRCIKKFSIQRFPKILVLHLKRFSESRIRTSKLTAFVNFP 523

Query:   188 -EVLNMAPYMSRTGDGSPMYSLYAVVVHLDVTNATFSGHYVCYVKNSHE-EWFRIDDSTV 245
                L++  + S   + + +Y+LYAV  H   +  T  GHY  Y ++    EW   +DS+V
Sbjct:   524 LRDLDLREFASENTNHA-VYNLYAVSNH---SGTTMGGHYTAYCRSPVTGEWHTFNDSSV 579

Query:   246 IPVKLERVLSEEAYMLLYARHSP 268
              P+   +V + +AY+L Y   SP
Sbjct:   580 SPMSSSQVRTSDAYLLFYELASP 602

 Score = 51 (23.0 bits), Expect = 6.3e-18, Sum P(2) = 6.3e-18
 Identities = 12/38 (31%), Positives = 20/38 (52%)

Query:    25 VSPIGILSKIQKIGSHLGHGREEDAHEFLRCAVDTMQS 62
             VSP    ++IQ+         ++DA EFLR  +D + +
Sbjct:   335 VSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHN 372


>UNIPROTKB|F1LSW9 [details] [associations]
            symbol:RGD1561481 "Ubiquitin carboxyl-terminal hydrolase"
            species:10116 "Rattus norvegicus" [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA]
            [GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
            InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 GO:GO:0008234 GO:GO:0006511
            GO:GO:0004221 GeneTree:ENSGT00650000093027 IPI:IPI00554220
            Ensembl:ENSRNOT00000016098 ArrayExpress:F1LSW9 Uniprot:F1LSW9
        Length = 359

 Score = 238 (88.8 bits), Expect = 6.3e-18, P = 6.3e-18
 Identities = 76/259 (29%), Positives = 129/259 (49%)

Query:    25 VSPIGILSKIQKIGSHLGHGREEDAHEFLRCAVDTMQSVCLKEFGAK---GKI------A 75
             + P   +++++K      +  ++DAHEFL   ++T+  +  +E   +   G++      +
Sbjct:   100 IPPKKFITRLRKENELFDNYMQQDAHEFLNYLLNTIADILQEERKQEKQNGRLRNGDVDS 159

Query:    76 EET------TLIGLTFGGYLRSKIKCLKCLGKSELYERMMDLTVEIDGDIGTLEEALAQF 129
             E+       T +   F G L ++ +CL C   S   E  +DL+V+++ +  ++   L  F
Sbjct:   160 EDNNSTPDPTWVHEIFQGTLTNETRCLTCETISSKDEDFLDLSVDVEQNT-SITHCLRGF 218

Query:   130 TASEILVGENKYYCSRCKSYEKAKKKLTVLEEPNILTIVLKRF----ESGNFGKLNKSVW 185
             + +E L  E KYYC  C+S ++A K++   + P IL + LKRF    +   + KL+  V 
Sbjct:   219 SNTETLCSEYKYYCEECRSKQEAHKRMKEKKLPMILALHLKRFKYMDQLHRYTKLSYRVV 278

Query:   186 FPEVLNMAPYMSRTGDGS-P--MYSLYAVVVHLDVTNATFSGHYVCYVKNSHEEWFRIDD 242
             FP  L +    + +GD + P  MY L AVVVH    +    GHY+  VK SH+ W   DD
Sbjct:   279 FPLELRL---FNTSGDATNPDRMYDLVAVVVHCG--SGPNRGHYIAIVK-SHDFWLLFDD 332

Query:   243 STVIPVKLERVLSEEAYML 261
               V  +  + +  EE Y L
Sbjct:   333 DIVEKIDAQAI--EEFYGL 349


>FB|FBgn0033916 [details] [associations]
            symbol:CG8494 species:7227 "Drosophila melanogaster"
            [GO:0004221 "ubiquitin thiolesterase activity" evidence=IEA]
            [GO:0006511 "ubiquitin-dependent protein catabolic process"
            evidence=IEA] [GO:0007399 "nervous system development"
            evidence=IMP] [GO:0016567 "protein ubiquitination" evidence=IMP]
            InterPro:IPR001394 InterPro:IPR006615 InterPro:IPR018200
            Pfam:PF00443 Pfam:PF06337 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 PROSITE:PS51283 SMART:SM00695 GO:GO:0007399
            GO:GO:0008234 GO:GO:0006511 GO:GO:0004221 HSSP:Q93009
            MEROPS:C19.A26 UCSC:CG8494-RA FlyBase:FBgn0033916 ChiTaRS:CG8494
            EMBL:AY118676 ProteinModelPortal:Q8MSP3 PRIDE:Q8MSP3
            InParanoid:Q8MSP3 Bgee:Q8MSP3 Uniprot:Q8MSP3
        Length = 990

 Score = 227 (85.0 bits), Expect = 7.8e-18, Sum P(3) = 7.8e-18
 Identities = 56/167 (33%), Positives = 89/167 (53%)

Query:   115 IDGDIGTLEEALAQFTASEILVGENKYYCSRCKSYEKAKKKLTVLEEPNILTIVLKRFES 174
             I G   TL + +A F +++ L G+N Y C RC       K   VL  P +L I LKRF +
Sbjct:   403 IYGPSVTLYDCMASFFSADELKGDNMYSCERCNKLRTGIKYSRVLTLPEVLCIHLKRFRN 462

Query:   175 G-NFG-KLNKSVWFP-EVLNMAPYMSRTGDGS-PMYSLYAVVVHLDVTNATFSGHYVCYV 230
               ++  K++  V+FP E  +M PY+ +       +Y+L +V+ H         GHY C+ 
Sbjct:   463 DLSYSSKISSDVYFPLEGFDMRPYIHKDCKSEVAIYNLSSVICHHGTVGG---GHYTCFA 519

Query:   231 KNS-HEEWFRIDDSTVIPVKLERVLSEEAYMLLYARHSPRPPALIRN 276
             +N+ + +W+  DD  V  V  E V S +AY+L Y +H+P+   L+R+
Sbjct:   520 RNALNGKWYEFDDQFVTEVSSELVQSCQAYVLFYHKHNPQMK-LVRD 565

 Score = 57 (25.1 bits), Expect = 7.8e-18, Sum P(3) = 7.8e-18
 Identities = 12/36 (33%), Positives = 20/36 (55%)

Query:    25 VSPIGILSKIQKIGSHLGHGREEDAHEFLRCAVDTM 60
             ++P GIL  I+ +       ++ D  EFLRC +D +
Sbjct:   168 IAPRGILYGIRTVHPMFRGYQQHDTQEFLRCFMDQL 203

 Score = 53 (23.7 bits), Expect = 7.8e-18, Sum P(3) = 7.8e-18
 Identities = 13/37 (35%), Positives = 19/37 (51%)

Query:    79 TLIGLTFGGYLRSKIKCLKCLGKSELYERMMDLTVEI 115
             ++I   F G L S ++CL C   S   E   DL++ I
Sbjct:   322 SIISDVFDGKLLSSVQCLTCDRVSTREETFQDLSLPI 358


>UNIPROTKB|I3LI16 [details] [associations]
            symbol:USP2 "Ubiquitin carboxyl-terminal hydrolase"
            species:9823 "Sus scrofa" [GO:0050821 "protein stabilization"
            evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
            evidence=IEA] [GO:0045931 "positive regulation of mitotic cell
            cycle" evidence=IEA] [GO:0042802 "identical protein binding"
            evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
            evidence=IEA] [GO:0030332 "cyclin binding" evidence=IEA]
            [GO:0016579 "protein deubiquitination" evidence=IEA] [GO:0005938
            "cell cortex" evidence=IEA] [GO:0000122 "negative regulation of
            transcription from RNA polymerase II promoter" evidence=IEA]
            [GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
            [GO:0006511 "ubiquitin-dependent protein catabolic process"
            evidence=IEA] [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=IEA] InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443
            PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 GO:GO:0005938
            GO:GO:0048471 GO:GO:0050821 GO:GO:0045931 GO:GO:0008234
            GO:GO:0000122 GO:GO:0006511 GO:GO:0016579 GO:GO:0004221 KO:K11833
            GeneTree:ENSGT00670000098024 EMBL:CU915638 GeneID:100520041
            KEGG:ssc:100520041 RefSeq:XP_003129987.1 Ensembl:ENSSSCT00000024719
            Uniprot:I3LI16
        Length = 606

 Score = 236 (88.1 bits), Expect = 1.1e-17, Sum P(2) = 1.1e-17
 Identities = 65/203 (32%), Positives = 104/203 (51%)

Query:    74 IAEETTLIGLTFGGYLRSKIKCLKCLGKSELYERMMDLTVEID--G--DIGTLEEALAQF 129
             +  E + IG  F G L+S + C  C   S +++   DL++ I   G  ++ TL + +  F
Sbjct:   405 LEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEV-TLMDCMRLF 463

Query:   130 TASEILVGENKYYCSRCKSYEKAKKKLTVLEEPNILTIVLKRFESGNF--GKLNKSVWFP 187
             T  ++L G+ K  C RC++ ++  KK +V   P IL + LKRF        KL   V FP
Sbjct:   464 TKEDVLDGDEKPTCCRCRARKRCIKKFSVQRFPKILVLHLKRFSESRIRTSKLTTFVNFP 523

Query:   188 -EVLNMAPYMSRTGDGSPMYSLYAVVVHLDVTNATFSGHYVCYVKNSHE-EWFRIDDSTV 245
                L++  + S   + + +Y+LYAV  H   +  T  GHY  Y ++    EW   +DS+V
Sbjct:   524 LRDLDLREFASENINHA-VYNLYAVSNH---SGTTMGGHYTAYCRSPVTGEWHTFNDSSV 579

Query:   246 IPVKLERVLSEEAYMLLYARHSP 268
              P+   +V + +AY+L Y   SP
Sbjct:   580 SPMSSSQVRTSDAYLLFYELASP 602

 Score = 51 (23.0 bits), Expect = 1.1e-17, Sum P(2) = 1.1e-17
 Identities = 12/38 (31%), Positives = 20/38 (52%)

Query:    25 VSPIGILSKIQKIGSHLGHGREEDAHEFLRCAVDTMQS 62
             VSP    ++IQ+         ++DA EFLR  +D + +
Sbjct:   335 VSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHN 372


>RGD|1305621 [details] [associations]
            symbol:Usp20 "ubiquitin specific peptidase 20" species:10116
            "Rattus norvegicus" [GO:0001664 "G-protein coupled receptor
            binding" evidence=IEA;ISO] [GO:0004197 "cysteine-type endopeptidase
            activity" evidence=IEA;ISO] [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA;ISO] [GO:0006511 "ubiquitin-dependent
            protein catabolic process" evidence=IEA] [GO:0008270 "zinc ion
            binding" evidence=IEA] [GO:0008277 "regulation of G-protein coupled
            receptor protein signaling pathway" evidence=IEA;ISO] [GO:0016579
            "protein deubiquitination" evidence=ISO] [GO:0070536 "protein
            K63-linked deubiquitination" evidence=IEA;ISO] [GO:0071108 "protein
            K48-linked deubiquitination" evidence=IEA;ISO] InterPro:IPR001394
            InterPro:IPR001607 InterPro:IPR006615 InterPro:IPR018200
            Pfam:PF00443 Pfam:PF02148 Pfam:PF06337 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271 PROSITE:PS51283
            SMART:SM00695 RGD:1305621 GO:GO:0046872 GO:GO:0008270
            Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511 GO:GO:0008277
            GO:GO:0071108 GO:GO:0070536 GO:GO:0004197 GO:GO:0004221
            EMBL:CH474001 CTD:10868 GeneTree:ENSGT00690000101718 KO:K11848
            OMA:ADYGQIS OrthoDB:EOG4D52WZ IPI:IPI00869542 RefSeq:NP_001101297.1
            Ensembl:ENSRNOT00000010786 GeneID:311856 KEGG:rno:311856
            UCSC:RGD:1305621 NextBio:664327 Uniprot:D3ZLQ8
        Length = 915

 Score = 211 (79.3 bits), Expect = 1.1e-17, Sum P(3) = 1.1e-17
 Identities = 56/157 (35%), Positives = 81/157 (51%)

Query:   117 GDIGTLEEALAQFTASEILVGENKYYCSRCKSYEKAKKKLTVLEEPNILTIVLKRFESG- 175
             G + TLE+ LA F A++ L G+N Y C RCK      K   VL  P IL + LKRF    
Sbjct:   535 GPVVTLEDCLAAFFAADELKGDNMYSCERCKKLRNGVKYCKVLCLPEILCVHLKRFRHEV 594

Query:   176 --NFGKLNKSVWFP-EVLNMAPYMSRTGDGS-PMYSLYAVVVHLDVTNATFSGHYVCYVK 231
               +F K++  V FP E L++ P++++        Y L +V+ H        SGHY+ Y +
Sbjct:   595 MYSF-KVSSHVSFPLEGLDLRPFLAKECTSQVTTYDLLSVICHHGTAG---SGHYIAYCQ 650

Query:   232 NS-HEEWFRIDDSTVIPVKLERVLSEEAYMLLYARHS 267
             N  + +W+  DD  V  V    V + EAY+L Y + S
Sbjct:   651 NVINGQWYEFDDQYVTEVHETVVQNVEAYVLFYRKSS 687

 Score = 67 (28.6 bits), Expect = 1.1e-17, Sum P(3) = 1.1e-17
 Identities = 19/62 (30%), Positives = 29/62 (46%)

Query:    69 GAKGKIAEETTLIGLTFGGYLRSKIKCLKCLGKSELYERMMDLTVEIDG--DIGTLEEAL 126
             G + K     ++I   F G + S ++CL C   S   E   DL++ I G  D+  L  A+
Sbjct:   434 GRRRKEQSYRSVISDVFNGSVLSLVQCLTCDRVSTTVETFQDLSLPIPGKEDLAKLHSAI 493

Query:   127 AQ 128
              Q
Sbjct:   494 YQ 495

 Score = 58 (25.5 bits), Expect = 1.1e-17, Sum P(3) = 1.1e-17
 Identities = 18/66 (27%), Positives = 30/66 (45%)

Query:     2 PGLHSTFDVVSCLILNAKDGSYPVSPIGILSKIQKIGSHLGHGREEDAHEFLRCAVDTMQ 61
             P L  ++  +   + + K  SY V P  +   I+ +        ++D  EFLRC +D + 
Sbjct:   186 PALCKSYQKLISEVWHKKRPSYVV-PTSLSHGIKLVNPMFRGYAQQDTQEFLRCLMDQLH 244

Query:    62 SVCLKE 67
                LKE
Sbjct:   245 EE-LKE 249


>MGI|MGI:1921520 [details] [associations]
            symbol:Usp20 "ubiquitin specific peptidase 20" species:10090
            "Mus musculus" [GO:0001664 "G-protein coupled receptor binding"
            evidence=ISO] [GO:0004197 "cysteine-type endopeptidase activity"
            evidence=ISO] [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=ISO] [GO:0005575 "cellular_component" evidence=ND]
            [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006508 "proteolysis"
            evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
            process" evidence=IEA] [GO:0006897 "endocytosis" evidence=IEA]
            [GO:0008233 "peptidase activity" evidence=IEA] [GO:0008234
            "cysteine-type peptidase activity" evidence=IEA] [GO:0008270 "zinc
            ion binding" evidence=IEA] [GO:0008277 "regulation of G-protein
            coupled receptor protein signaling pathway" evidence=ISO]
            [GO:0016579 "protein deubiquitination" evidence=ISO] [GO:0016787
            "hydrolase activity" evidence=IEA] [GO:0046872 "metal ion binding"
            evidence=IEA] [GO:0070536 "protein K63-linked deubiquitination"
            evidence=ISO] [GO:0071108 "protein K48-linked deubiquitination"
            evidence=ISO] InterPro:IPR001394 InterPro:IPR001607
            InterPro:IPR006615 InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148
            Pfam:PF06337 PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235
            PROSITE:PS50271 PROSITE:PS51283 SMART:SM00695 MGI:MGI:1921520
            GO:GO:0048471 GO:GO:0046872 GO:GO:0008270 GO:GO:0006897
            Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511 EMBL:CH466542
            GO:GO:0008277 GO:GO:0071108 GO:GO:0070536 GO:GO:0004197
            GO:GO:0004221 EMBL:AL844546 HSSP:Q93009 eggNOG:COG5560 CTD:10868
            GeneTree:ENSGT00690000101718 HOGENOM:HOG000286031
            HOVERGEN:HBG054196 KO:K11848 OMA:ADYGQIS OrthoDB:EOG4D52WZ
            MEROPS:C19.025 EMBL:AF449715 EMBL:AK173083 EMBL:AK054279
            EMBL:AK163663 EMBL:BC079674 IPI:IPI00469997 RefSeq:NP_083122.1
            UniGene:Mm.346654 ProteinModelPortal:Q8C6M1 SMR:Q8C6M1
            PhosphoSite:Q8C6M1 PRIDE:Q8C6M1 Ensembl:ENSMUST00000102849
            Ensembl:ENSMUST00000170476 GeneID:74270 KEGG:mmu:74270
            UCSC:uc008jde.2 InParanoid:Q8C6M1 NextBio:340299 Bgee:Q8C6M1
            Genevestigator:Q8C6M1 Uniprot:Q8C6M1
        Length = 916

 Score = 211 (79.3 bits), Expect = 1.2e-17, Sum P(3) = 1.2e-17
 Identities = 56/157 (35%), Positives = 81/157 (51%)

Query:   117 GDIGTLEEALAQFTASEILVGENKYYCSRCKSYEKAKKKLTVLEEPNILTIVLKRFESG- 175
             G + TLE+ LA F A++ L G+N Y C RCK      K   VL  P IL + LKRF    
Sbjct:   536 GPVVTLEDCLAAFFAADELKGDNMYSCERCKKLRNGVKYCKVLCLPEILCVHLKRFRHEV 595

Query:   176 --NFGKLNKSVWFP-EVLNMAPYMSRTGDGS-PMYSLYAVVVHLDVTNATFSGHYVCYVK 231
               +F K++  V FP E L++ P++++        Y L +V+ H        SGHY+ Y +
Sbjct:   596 MYSF-KVSSHVSFPLEGLDLRPFLAKECTSQVTTYDLLSVICHHGTAG---SGHYIAYCQ 651

Query:   232 NS-HEEWFRIDDSTVIPVKLERVLSEEAYMLLYARHS 267
             N  + +W+  DD  V  V    V + EAY+L Y + S
Sbjct:   652 NVINGQWYEFDDQYVTEVHETVVQNVEAYVLFYRKSS 688

 Score = 67 (28.6 bits), Expect = 1.2e-17, Sum P(3) = 1.2e-17
 Identities = 19/62 (30%), Positives = 29/62 (46%)

Query:    69 GAKGKIAEETTLIGLTFGGYLRSKIKCLKCLGKSELYERMMDLTVEIDG--DIGTLEEAL 126
             G + K     ++I   F G + S ++CL C   S   E   DL++ I G  D+  L  A+
Sbjct:   435 GRRRKEQSYRSVISDVFNGSVLSLVQCLTCDRVSTTVETFQDLSLPIPGKEDLAKLHSAI 494

Query:   127 AQ 128
              Q
Sbjct:   495 YQ 496

 Score = 58 (25.5 bits), Expect = 1.2e-17, Sum P(3) = 1.2e-17
 Identities = 18/66 (27%), Positives = 30/66 (45%)

Query:     2 PGLHSTFDVVSCLILNAKDGSYPVSPIGILSKIQKIGSHLGHGREEDAHEFLRCAVDTMQ 61
             P L  ++  +   + + K  SY V P  +   I+ +        ++D  EFLRC +D + 
Sbjct:   186 PALCKSYQKLISEVWHKKRPSYVV-PTSLSHGIKLVNPMFRGYAQQDTQEFLRCLMDQLH 244

Query:    62 SVCLKE 67
                LKE
Sbjct:   245 EE-LKE 249


>UNIPROTKB|E2QZQ0 [details] [associations]
            symbol:USP3 "Ubiquitin carboxyl-terminal hydrolase"
            species:9615 "Canis lupus familiaris" [GO:0042393 "histone binding"
            evidence=IEA] [GO:0031647 "regulation of protein stability"
            evidence=IEA] [GO:0016578 "histone deubiquitination" evidence=IEA]
            [GO:0006281 "DNA repair" evidence=IEA] [GO:0000790 "nuclear
            chromatin" evidence=IEA] [GO:0000278 "mitotic cell cycle"
            evidence=IEA] [GO:0008234 "cysteine-type peptidase activity"
            evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
            [GO:0006511 "ubiquitin-dependent protein catabolic process"
            evidence=IEA] [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=IEA] InterPro:IPR001394 InterPro:IPR001607
            InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271 GO:GO:0046872
            GO:GO:0008270 GO:GO:0006281 GO:GO:0008234 GO:GO:0031647
            GO:GO:0000790 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511
            GO:GO:0016578 GO:GO:0004221 GO:GO:0000278
            GeneTree:ENSGT00690000102047 CTD:9960 KO:K11986 OMA:DCLRSFT
            EMBL:AAEX03016202 EMBL:AAEX03016201 RefSeq:XP_544715.3
            Ensembl:ENSCAFT00000026918 GeneID:487590 KEGG:cfa:487590
            NextBio:20861160 Uniprot:E2QZQ0
        Length = 520

 Score = 233 (87.1 bits), Expect = 1.2e-17, Sum P(2) = 1.2e-17
 Identities = 65/212 (30%), Positives = 105/212 (49%)

Query:    78 TTLIGLTFGGYLRSKIKCLKCLGKSELYERMMDLTVEI-------------DGDIGTLEE 124
             +T++   FGG L++++ CL C  +S  ++  +DL+++I             +G + +L +
Sbjct:   307 STVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRNKRSKNQENGPVCSLRD 366

Query:   125 ALAQFTASEILVGENKYYCSRCKSYEKAKKKLTVLEEPNILTIVLKRFESGNF--GKLNK 182
              L  FT  E L     Y C +CK  +K+ KK  + + P +L + LKRF    +   K++ 
Sbjct:   367 CLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDT 426

Query:   183 SVWFP-EVLNMAPYMSRTGDGSP---MYSLYAVVVHLDVTNATFSGHYVCYVKNSHE-EW 237
              V FP   L+M  Y+    +  P   +Y L AVVVH    +   SGHY  Y   +HE  W
Sbjct:   427 YVEFPLRGLDMKCYLLEPENSGPEHCLYDLAAVVVHHG--SGVGSGHYTAYA--THEGRW 482

Query:   238 FRIDDSTVIPVKLERVLSEEAYMLLYARHSPR 269
             F  +DSTV     + V+  +AY+L Y     +
Sbjct:   483 FHFNDSTVTLTDEDTVVKAKAYILFYVERQAK 514

 Score = 51 (23.0 bits), Expect = 1.2e-17, Sum P(2) = 1.2e-17
 Identities = 11/33 (33%), Positives = 19/33 (57%)

Query:    26 SPIGILSKIQKIGSHLGHGREEDAHEFLRCAVD 58
             SP  +   + KI  +    +++DAHEF+R  +D
Sbjct:   238 SPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLD 270


>MGI|MGI:2152450 [details] [associations]
            symbol:Usp3 "ubiquitin specific peptidase 3" species:10090
            "Mus musculus" [GO:0000278 "mitotic cell cycle" evidence=ISO]
            [GO:0000790 "nuclear chromatin" evidence=ISO] [GO:0004221
            "ubiquitin thiolesterase activity" evidence=ISO] [GO:0005634
            "nucleus" evidence=IEA] [GO:0006281 "DNA repair" evidence=ISO]
            [GO:0006508 "proteolysis" evidence=IEA] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA]
            [GO:0006974 "response to DNA damage stimulus" evidence=IEA]
            [GO:0007049 "cell cycle" evidence=IEA] [GO:0008233 "peptidase
            activity" evidence=IEA] [GO:0008234 "cysteine-type peptidase
            activity" evidence=IEA] [GO:0008270 "zinc ion binding"
            evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
            [GO:0016578 "histone deubiquitination" evidence=ISO] [GO:0016787
            "hydrolase activity" evidence=IEA] [GO:0031647 "regulation of
            protein stability" evidence=ISO] [GO:0042393 "histone binding"
            evidence=ISO] [GO:0046872 "metal ion binding" evidence=IEA]
            InterPro:IPR001394 InterPro:IPR001607 InterPro:IPR018200
            Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 PROSITE:PS50271 MGI:MGI:2152450 GO:GO:0046872
            GO:GO:0008270 GO:GO:0006281 GO:GO:0008234 GO:GO:0031647
            GO:GO:0000790 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511
            GO:GO:0016578 GO:GO:0004221 GO:GO:0000278 eggNOG:COG5560
            HOGENOM:HOG000231498 GeneTree:ENSGT00690000102047 MEROPS:C19.026
            CTD:9960 HOVERGEN:HBG103589 KO:K11986 OMA:DCLRSFT OrthoDB:EOG4G4GQC
            EMBL:AK031141 EMBL:BC017156 IPI:IPI00127231 RefSeq:NP_659186.1
            UniGene:Mm.38976 ProteinModelPortal:Q91W36 SMR:Q91W36
            PhosphoSite:Q91W36 PaxDb:Q91W36 PRIDE:Q91W36
            Ensembl:ENSMUST00000127569 GeneID:235441 KEGG:mmu:235441
            UCSC:uc009qey.1 InParanoid:Q91W36 NextBio:382674 Bgee:Q91W36
            CleanEx:MM_USP3 Genevestigator:Q91W36 GermOnline:ENSMUSG00000032376
            Uniprot:Q91W36
        Length = 520

 Score = 233 (87.1 bits), Expect = 1.2e-17, Sum P(2) = 1.2e-17
 Identities = 69/215 (32%), Positives = 104/215 (48%)

Query:    78 TTLIGLTFGGYLRSKIKCLKCLGKSELYERMMDLTVEI-------------DGDIGTLEE 124
             +T++   FGG L++++ CL C  +S  ++  +DL+++I             +G + +L +
Sbjct:   307 STVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRSKRSKNQENGPVCSLRD 366

Query:   125 ALAQFTASEILVGENKYYCSRCKSYEKAKKKLTVLEEPNILTIVLKRFESGNF--GKLNK 182
              L  FT  E L     Y C +CK  +K+ KK  + + P  L + LKRF    +   K++ 
Sbjct:   367 CLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKALCLHLKRFHWTAYLRNKVDT 426

Query:   183 SVWFP-EVLNMAPYM---SRTGDGSPMYSLYAVVVHLDVTNATFSGHYVCYVKNSHE-EW 237
              V FP   L+M  Y+     +G  S +Y L AVVVH    +   SGHY  Y    HE  W
Sbjct:   427 YVQFPLRGLDMKCYLLEPENSGPDSCLYDLAAVVVHHG--SGVGSGHYTAYAV--HEGRW 482

Query:   238 FRIDDSTVIPVKLERVLSEEAYMLLYARHSPRPPA 272
             F  +DSTV     E V   +AY+L Y     R  A
Sbjct:   483 FHFNDSTVTVTDEETVGKAKAYILFYVERQARAGA 517

 Score = 51 (23.0 bits), Expect = 1.2e-17, Sum P(2) = 1.2e-17
 Identities = 11/33 (33%), Positives = 19/33 (57%)

Query:    26 SPIGILSKIQKIGSHLGHGREEDAHEFLRCAVD 58
             SP  +   + KI  +    +++DAHEF+R  +D
Sbjct:   238 SPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLD 270


>DICTYBASE|DDB_G0290453 [details] [associations]
            symbol:usp12 "putative ubiquitin carboxyl-terminal
            hydrolase (UCH)" species:44689 "Dictyostelium discoideum"
            [GO:0030587 "sorocarp development" evidence=IMP] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA]
            [GO:0004221 "ubiquitin thiolesterase activity" evidence=IEA]
            [GO:0016787 "hydrolase activity" evidence=IEA] [GO:0008234
            "cysteine-type peptidase activity" evidence=IEA] [GO:0008233
            "peptidase activity" evidence=IEA] [GO:0006508 "proteolysis"
            evidence=IEA] InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443
            PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235
            dictyBase:DDB_G0290453 GO:GO:0008234 GenomeReviews:CM000154_GR
            GO:GO:0030587 GO:GO:0006511 GO:GO:0004221 EMBL:AAFI02000163
            eggNOG:COG5533 KO:K11842 RefSeq:XP_635735.2
            ProteinModelPortal:Q54G37 EnsemblProtists:DDB0237694 GeneID:8627653
            KEGG:ddi:DDB_G0290453 OMA:HHIDIRE ProtClustDB:CLSZ2734177
            Uniprot:Q54G37
        Length = 475

 Score = 241 (89.9 bits), Expect = 1.2e-17, P = 1.2e-17
 Identities = 66/230 (28%), Positives = 116/230 (50%)

Query:    25 VSPIGILSKIQKIGSHLGHGREEDAHEFLRCAVDTMQSVCLKEFGAKGKIAEET------ 78
             + P   + +++K          +DAHEFL   ++++     K+   K K  +++      
Sbjct:   209 LKPETFVERLKKENELFSSFMHQDAHEFLNFLLNSIAEFLQKQ--QKNKQPQQSSEKKEC 266

Query:    79 --TLIGLTFGGYLRSKIKCLKCLGKSELYERMMDLTVEIDGDIGTLEEALAQFTASEILV 136
               TL+   F G L ++ KCL C   +   E  +DL+++I+ +  +L   L+ F++ EIL 
Sbjct:   267 NKTLVHEIFEGTLTNETKCLTCESITNKDESFLDLSIDIEQN-KSLTNCLSNFSSIEILS 325

Query:   137 GENKYYCSRCKSYEKAKKKLTVLEEPNILTIVLKRFES----GNFGKLNKSVWFPEVLNM 192
               +K++C +C S ++A+K++ + + PN L I LKRF+       + KLN  V FP  + +
Sbjct:   326 KNDKFFCDQCNSLQEAQKRMKIKKLPNTLIIHLKRFKYMENIQQYTKLNYRVVFPFEIII 385

Query:   193 APYMSRTGDGSPMYSLYAVVVHLDVTNATFSGHYVCYVKNSHEEWFRIDD 242
                 S   +    ++L+AVV+H  V +    GHY   +K  H  WF  DD
Sbjct:   386 QNTTSNIDEPDKKFNLFAVVIH--VGSGPNHGHYYSLIK-CHGVWFVFDD 432


>UNIPROTKB|A1CW53 [details] [associations]
            symbol:creB "Probable ubiquitin carboxyl-terminal hydrolase
            creB" species:331117 "Neosartorya fischeri NRRL 181" [GO:0004221
            "ubiquitin thiolesterase activity" evidence=ISS] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=ISS]
            [GO:0045013 "carbon catabolite repression of transcription"
            evidence=ISS] InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443
            PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 GO:GO:0008234
            GO:GO:0006511 GO:GO:0004221 eggNOG:COG5533 HOGENOM:HOG000192482
            KO:K11872 OrthoDB:EOG43XZCS GO:GO:0045013 EMBL:DS027685
            RefSeq:XP_001266752.1 EnsemblFungi:CADNFIAT00009466 GeneID:4593253
            KEGG:nfi:NFIA_103430 Uniprot:A1CW53
        Length = 761

 Score = 245 (91.3 bits), Expect = 1.3e-17, P = 1.3e-17
 Identities = 74/262 (28%), Positives = 123/262 (46%)

Query:    56 AVDTMQSVCLKEFGAKGKIAEETTLIGLTFGGYLRSKIKCLKCLGKSELYERMMDLTVEI 115
             A +T  SV  +      K    T  +   F G L S+ +CL C   S+  E  +DL+V++
Sbjct:   250 APETADSVD-QSSSTGSKTPNTTRWVHELFEGLLTSETQCLTCEKVSQRDEVFLDLSVDL 308

Query:   116 DGDIGTLEEALAQFTASEILVGENKYYCSRCKSYEKAKKKLTVLEEPNILTIVLKRFE-S 174
             +    ++   L +F+A E+L   NK++C  C   ++A+K++ +   P IL + LKRF+ +
Sbjct:   309 EQH-SSVTSCLRKFSAEEMLCERNKFHCDNCGGLQEAEKRMKIKRLPRILALHLKRFKYT 367

Query:   175 GNFGKLNK---SVWFPEVLNMAPYMSRTGDGSPMYSLYAVVVHLDVTNATFSGHYVCYVK 231
              +  +L K    V +P  L +        D   +Y LYAVVVH+      + GHYV  +K
Sbjct:   368 EDLQRLQKLFHRVVYPYHLRLFNTTDDAEDPDRLYELYAVVVHIG--GGPYHGHYVAIIK 425

Query:   232 NSHEEWFRIDDSTVIPVK---LERVLSEE-----AYMLLYARHSPRPPALIRNNVSHGVK 283
                  W   DD  V PV    ++    ++     AY+L Y   +    A+++      + 
Sbjct:   426 TEDRGWLLFDDEMVEPVDKNYVKNFFGDKPGLACAYVLFYQETTLE--AVLKEQEQENMD 483

Query:   284 SKKKNLEAVDLNNTSKIRSNSY 305
             S   NL A D N+T  ++ N +
Sbjct:   484 S---NLAATDANDTI-LKQNGF 501


>UNIPROTKB|B0Y4P5 [details] [associations]
            symbol:creB "Probable ubiquitin carboxyl-terminal hydrolase
            creB" species:451804 "Aspergillus fumigatus A1163" [GO:0004221
            "ubiquitin thiolesterase activity" evidence=ISS] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=ISS]
            [GO:0045013 "carbon catabolite repression of transcription"
            evidence=ISS] InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443
            PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 GO:GO:0008234
            GO:GO:0006511 GO:GO:0004221 HOGENOM:HOG000192482 GO:GO:0045013
            EMBL:DS499598 EnsemblFungi:CADAFUBT00006929 Uniprot:B0Y4P5
        Length = 767

 Score = 245 (91.3 bits), Expect = 1.3e-17, P = 1.3e-17
 Identities = 74/262 (28%), Positives = 123/262 (46%)

Query:    56 AVDTMQSVCLKEFGAKGKIAEETTLIGLTFGGYLRSKIKCLKCLGKSELYERMMDLTVEI 115
             A +T  SV  +      K    T  +   F G L S+ +CL C   S+  E  +DL+V++
Sbjct:   244 APETADSVD-QSSSTGSKTPNTTRWVHELFEGLLTSETQCLTCEKVSQRDEVFLDLSVDL 302

Query:   116 DGDIGTLEEALAQFTASEILVGENKYYCSRCKSYEKAKKKLTVLEEPNILTIVLKRFE-S 174
             +    ++   L +F+A E+L   NK++C  C   ++A+K++ +   P IL + LKRF+ +
Sbjct:   303 EQH-SSVTSCLRKFSAEEMLCERNKFHCDNCGGLQEAEKRMKIKRLPRILALHLKRFKYT 361

Query:   175 GNFGKLNK---SVWFPEVLNMAPYMSRTGDGSPMYSLYAVVVHLDVTNATFSGHYVCYVK 231
              +  +L K    V +P  L +        D   +Y LYAVVVH+      + GHYV  +K
Sbjct:   362 EDLQRLQKLFHRVVYPYHLRLFNTTDDAEDPDRLYELYAVVVHIG--GGPYHGHYVAIIK 419

Query:   232 NSHEEWFRIDDSTVIPVK---LERVLSEE-----AYMLLYARHSPRPPALIRNNVSHGVK 283
                  W   DD  V PV    ++    ++     AY+L Y   +    A+++      + 
Sbjct:   420 TEDRGWLLFDDEMVEPVDKNYVKNFFGDKPGLACAYVLFYQETTLE--AVLKEQEQENMD 477

Query:   284 SKKKNLEAVDLNNTSKIRSNSY 305
             S   NL A D N+T  ++ N +
Sbjct:   478 S---NLAATDANDTI-LKQNGF 495


>UNIPROTKB|Q4WQI1 [details] [associations]
            symbol:creB "Probable ubiquitin carboxyl-terminal hydrolase
            creB" species:330879 "Aspergillus fumigatus Af293" [GO:0004221
            "ubiquitin thiolesterase activity" evidence=ISS] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=ISS]
            [GO:0045013 "carbon catabolite repression of transcription"
            evidence=ISS] InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443
            PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 GO:GO:0008234
            GO:GO:0006511 GO:GO:0004221 eggNOG:COG5533 HOGENOM:HOG000192482
            KO:K11872 OrthoDB:EOG43XZCS GO:GO:0045013 EMBL:AAHF01000005
            RefSeq:XP_751541.2 STRING:Q4WQI1 EnsemblFungi:CADAFUAT00007967
            GeneID:3509101 GenomeReviews:CM000172_GR KEGG:afm:AFUA_4G12910
            Uniprot:Q4WQI1
        Length = 775

 Score = 245 (91.3 bits), Expect = 1.3e-17, P = 1.3e-17
 Identities = 74/262 (28%), Positives = 123/262 (46%)

Query:    56 AVDTMQSVCLKEFGAKGKIAEETTLIGLTFGGYLRSKIKCLKCLGKSELYERMMDLTVEI 115
             A +T  SV  +      K    T  +   F G L S+ +CL C   S+  E  +DL+V++
Sbjct:   250 APETADSVD-QSSSTGSKTPNTTRWVHELFEGLLTSETQCLTCEKVSQRDEVFLDLSVDL 308

Query:   116 DGDIGTLEEALAQFTASEILVGENKYYCSRCKSYEKAKKKLTVLEEPNILTIVLKRFE-S 174
             +    ++   L +F+A E+L   NK++C  C   ++A+K++ +   P IL + LKRF+ +
Sbjct:   309 EQH-SSVTSCLRKFSAEEMLCERNKFHCDNCGGLQEAEKRMKIKRLPRILALHLKRFKYT 367

Query:   175 GNFGKLNK---SVWFPEVLNMAPYMSRTGDGSPMYSLYAVVVHLDVTNATFSGHYVCYVK 231
              +  +L K    V +P  L +        D   +Y LYAVVVH+      + GHYV  +K
Sbjct:   368 EDLQRLQKLFHRVVYPYHLRLFNTTDDAEDPDRLYELYAVVVHIG--GGPYHGHYVAIIK 425

Query:   232 NSHEEWFRIDDSTVIPVK---LERVLSEE-----AYMLLYARHSPRPPALIRNNVSHGVK 283
                  W   DD  V PV    ++    ++     AY+L Y   +    A+++      + 
Sbjct:   426 TEDRGWLLFDDEMVEPVDKNYVKNFFGDKPGLACAYVLFYQETTLE--AVLKEQEQENMD 483

Query:   284 SKKKNLEAVDLNNTSKIRSNSY 305
             S   NL A D N+T  ++ N +
Sbjct:   484 S---NLAATDANDTI-LKQNGF 501


>UNIPROTKB|F1NUS4 [details] [associations]
            symbol:F1NUS4 "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
            process" evidence=IEA] InterPro:IPR001394 InterPro:IPR018200
            Pfam:PF00443 PROSITE:PS00973 PROSITE:PS50235 GO:GO:0006511
            GO:GO:0004221 GeneTree:ENSGT00670000098024 EMBL:AADN02041838
            EMBL:AADN02041840 IPI:IPI00821325 Ensembl:ENSGALT00000040826
            Uniprot:F1NUS4
        Length = 161

 Score = 221 (82.9 bits), Expect = 1.3e-17, P = 1.3e-17
 Identities = 55/156 (35%), Positives = 83/156 (53%)

Query:   117 GDIGTLEEALAQFTASEILVGENKYYCSRCKSYEKAKKKLTVLEEPNILTIVLKRFESGN 176
             G++ TL + L  FT  ++L G+ K  C RCK+  +  KK ++ + P IL + LKRF    
Sbjct:     7 GEV-TLMDCLRLFTKEDVLDGDEKPTCCRCKARTRCTKKFSIQKFPKILVLHLKRFSEAR 65

Query:   177 F--GKLNKSVWFP-EVLNMAPYMSRTGDGSPMYSLYAVVVHLDVTNATFSGHYVCYVKNS 233
                 KL   V FP + L++  + S++ + + +Y+LYAV  H   +  T  GHY  Y K+ 
Sbjct:    66 IRASKLTTFVNFPLKDLDLREFASQSCNHA-VYNLYAVSNH---SGTTMGGHYTAYCKSP 121

Query:   234 -HEEWFRIDDSTVIPVKLERVLSEEAYMLLYARHSP 268
                EW   +DS V P+    V S +AY+L Y   SP
Sbjct:   122 ISSEWHSFNDSRVTPMSSSHVRSSDAYLLFYELASP 157


>MGI|MGI:1922333 [details] [associations]
            symbol:Usp50 "ubiquitin specific peptidase 50" species:10090
            "Mus musculus" [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
            [GO:0006508 "proteolysis" evidence=IEA] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA]
            [GO:0008233 "peptidase activity" evidence=IEA] [GO:0008234
            "cysteine-type peptidase activity" evidence=IEA] [GO:0016787
            "hydrolase activity" evidence=IEA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 MGI:MGI:1922333 GO:GO:0008234 GO:GO:0006511
            GO:GO:0004221 eggNOG:COG5533 HSSP:P54578 HOGENOM:HOG000231498
            GeneTree:ENSGT00670000097591 MEROPS:C19.058 HOVERGEN:HBG098592
            EMBL:AK007018 EMBL:AK015766 EMBL:BC061020 IPI:IPI00420445
            IPI:IPI00461643 RefSeq:NP_083439.2 UniGene:Mm.389373
            ProteinModelPortal:Q6P8X6 SMR:Q6P8X6 PhosphoSite:Q6P8X6
            PRIDE:Q6P8X6 Ensembl:ENSMUST00000028842 GeneID:75083 KEGG:mmu:75083
            CTD:373509 InParanoid:Q6P8X6 OMA:HFQGVTG NextBio:342171 Bgee:Q6P8X6
            CleanEx:MM_USP50 Genevestigator:Q6P8X6
            GermOnline:ENSMUSG00000027364 Uniprot:Q6P8X6
        Length = 390

 Score = 237 (88.5 bits), Expect = 1.5e-17, P = 1.5e-17
 Identities = 76/257 (29%), Positives = 119/257 (46%)

Query:    25 VSPIGILSKIQKIGSHLGHGREEDAHEFLRCAVDTMQSV----CLKEFGAK--G-----K 73
             VSP   LS +  +        ++DA EFL   ++ +       C +    K  G     K
Sbjct:   108 VSPEIFLSAVGSLYPAFLKKTQQDAQEFLIYVLNELHEALKKHCRRRVNEKRTGQSCCRK 167

Query:    74 I-AEETTLIGLTFGGYLRSKIKCLKCLGKSELYERMMDLTVEIDGDIG-TLEEALAQFTA 131
             + A+ET++I   F G L   I CLKC   +   E    L++ I  D   +L++ L  F  
Sbjct:   168 VPAQETSIITRLFEGQLSYSITCLKCESCTHKNEVFTILSLPIPSDYECSLQDCLQCFFQ 227

Query:   132 SEILVGENKYYCSRCKSYEKAKKKLTVLEEPNILTIVLKRFE-SGNFG-KLNKSVWFPEV 189
              + L   N+ YCS C+  ++A  + T+ + P I+    KRF+  G    KL   + +P  
Sbjct:   228 QDTLTWSNQIYCSFCEIKQEAAVRTTISKVPKIIVFHFKRFDIQGTVKRKLRTDIHYPLT 287

Query:   190 -LNMAPYMSRTGDGSPMYSLYAVVVHLDVTNATFSGHYVCYVKNS-HEEWFRIDDSTVIP 247
              L++ PY+       PMY+L AVV H    +    GHY  + KNS  + W+  DD+ V  
Sbjct:   288 NLDLTPYICPVFRKHPMYNLCAVVNHFGDLDG---GHYTAFCKNSVTQAWYSFDDTRVSE 344

Query:   248 VKLERVLSEEAYMLLYA 264
             +    V +  AY+L Y+
Sbjct:   345 IPDTSVQTATAYLLFYS 361


>UNIPROTKB|F1N0I6 [details] [associations]
            symbol:USP3 "Ubiquitin carboxyl-terminal hydrolase"
            species:9913 "Bos taurus" [GO:0042393 "histone binding"
            evidence=IEA] [GO:0031647 "regulation of protein stability"
            evidence=IEA] [GO:0016578 "histone deubiquitination" evidence=IEA]
            [GO:0006281 "DNA repair" evidence=IEA] [GO:0000790 "nuclear
            chromatin" evidence=IEA] [GO:0000278 "mitotic cell cycle"
            evidence=IEA] [GO:0008234 "cysteine-type peptidase activity"
            evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
            [GO:0006511 "ubiquitin-dependent protein catabolic process"
            evidence=IEA] [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=IEA] InterPro:IPR001394 InterPro:IPR001607
            InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271 GO:GO:0046872
            GO:GO:0008270 GO:GO:0006281 GO:GO:0008234 GO:GO:0031647
            GO:GO:0000790 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511
            GO:GO:0016578 GO:GO:0004221 GO:GO:0000278
            GeneTree:ENSGT00690000102047 OMA:DCLRSFT EMBL:DAAA02028746
            IPI:IPI00715279 Ensembl:ENSBTAT00000011598 Uniprot:F1N0I6
        Length = 521

 Score = 232 (86.7 bits), Expect = 1.6e-17, Sum P(2) = 1.6e-17
 Identities = 66/212 (31%), Positives = 104/212 (49%)

Query:    78 TTLIGLTFGGYLRSKIKCLKCLGKSELYERMMDLTVEI-------------DGDIGTLEE 124
             +T++   FGG L++++ CL C  +S  ++  +DL+++I             +G   +L +
Sbjct:   308 STVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRNKRSKNQENGPTCSLRD 367

Query:   125 ALAQFTASEILVGENKYYCSRCKSYEKAKKKLTVLEEPNILTIVLKRFESGNF--GKLNK 182
              L  FT  E L     Y C +CK  +K+ KK  + + P +L + LKRF    +   K++ 
Sbjct:   368 CLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDT 427

Query:   183 SVWFP-EVLNMAPYMSRTGDGSP---MYSLYAVVVHLDVTNATFSGHYVCYVKNSHE-EW 237
              V FP   L+M  Y+    +  P   +Y L AVVVH    +   SGHY  Y   +HE  W
Sbjct:   428 YVEFPLRGLDMKCYLLEPENSGPENCLYDLAAVVVHHG--SGVGSGHYTAYA--THEGRW 483

Query:   238 FRIDDSTVIPVKLERVLSEEAYMLLYARHSPR 269
             F  +DSTV     + VL  +AY+L Y     +
Sbjct:   484 FHFNDSTVTLTDEDTVLKAKAYILFYVERQAK 515

 Score = 51 (23.0 bits), Expect = 1.6e-17, Sum P(2) = 1.6e-17
 Identities = 11/33 (33%), Positives = 19/33 (57%)

Query:    26 SPIGILSKIQKIGSHLGHGREEDAHEFLRCAVD 58
             SP  +   + KI  +    +++DAHEF+R  +D
Sbjct:   239 SPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLD 271


>UNIPROTKB|A1CIL1 [details] [associations]
            symbol:creB "Probable ubiquitin carboxyl-terminal hydrolase
            creB" species:344612 "Aspergillus clavatus NRRL 1" [GO:0004221
            "ubiquitin thiolesterase activity" evidence=ISS] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=ISS]
            [GO:0045013 "carbon catabolite repression of transcription"
            evidence=ISS] InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443
            PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 GO:GO:0008234
            GO:GO:0006511 GO:GO:0004221 EMBL:DS027054 RefSeq:XP_001272142.1
            STRING:A1CIL1 EnsemblFungi:CADACLAT00004514 GeneID:4703625
            KEGG:act:ACLA_051880 eggNOG:COG5533 HOGENOM:HOG000192482 KO:K11872
            OrthoDB:EOG43XZCS GO:GO:0045013 Uniprot:A1CIL1
        Length = 760

 Score = 244 (91.0 bits), Expect = 1.6e-17, P = 1.6e-17
 Identities = 72/248 (29%), Positives = 117/248 (47%)

Query:    73 KIAEETTLIGLTFGGYLRSKIKCLKCLGKSELYERMMDLTVEIDGDIGTLEEALAQFTAS 132
             K    T  +   F G L S+ +CL C   S+  E  +DL+V+++    ++   L +F+A 
Sbjct:   267 KTPNTTRWVHELFEGTLTSETQCLTCEKVSQRDEIFLDLSVDLEQH-SSVTSCLRKFSAE 325

Query:   133 EILVGENKYYCSRCKSYEKAKKKLTVLEEPNILTIVLKRFE-SGNFGKLNK---SVWFPE 188
             E+L   NK++C  C   ++A+K++ +   P IL + LKRF+ + +  +L K    V +P 
Sbjct:   326 EMLCERNKFHCDNCGGLQEAEKRMKIKRLPRILALHLKRFKYTEDLQRLQKLFHRVVYPY 385

Query:   189 VLNMAPYMSRTGDGSPMYSLYAVVVHLDVTNATFSGHYVCYVKNSHEEWFRIDDSTVIPV 248
              L +        D   +Y LYAVVVH+      + GHYV  +K     W   DD  V PV
Sbjct:   386 HLRLFNTTDDAEDPDRLYELYAVVVHIG--GGPYHGHYVAIIKTEDRGWLLFDDELVEPV 443

Query:   249 KLERV---LSEE-----AYMLLYARHSPRPPALIRNNVSHGVKSKKKNLEAVDLNNTSKI 300
                 V     ++     AY+L Y   +    A+++      ++S   NL A D N  + +
Sbjct:   444 DKNYVRNFFGDKPGLACAYVLFYQETTLE--AVMKEQEQENMES---NLSATDTNEAA-L 497

Query:   301 RSNSYIPS 308
             + N   PS
Sbjct:   498 KPNGSSPS 505


>RGD|1308852 [details] [associations]
            symbol:Usp3 "ubiquitin specific peptidase 3" species:10116
            "Rattus norvegicus" [GO:0000278 "mitotic cell cycle" evidence=ISO]
            [GO:0000790 "nuclear chromatin" evidence=ISO] [GO:0004221
            "ubiquitin thiolesterase activity" evidence=ISO] [GO:0006281 "DNA
            repair" evidence=ISO] [GO:0016578 "histone deubiquitination"
            evidence=ISO] [GO:0031647 "regulation of protein stability"
            evidence=ISO] [GO:0042393 "histone binding" evidence=ISO]
            InterPro:IPR001394 InterPro:IPR001607 InterPro:IPR018200
            Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 PROSITE:PS50271 RGD:1308852 GO:GO:0046872
            GO:GO:0008270 GO:GO:0008234 Gene3D:3.30.40.10 InterPro:IPR013083
            GO:GO:0006511 GO:GO:0004221 MEROPS:C19.026 CTD:9960
            HOVERGEN:HBG103589 KO:K11986 IPI:IPI00366664 EMBL:DQ076481
            RefSeq:NP_001020595.1 UniGene:Rn.164920 ProteinModelPortal:Q4JL29
            GeneID:363084 KEGG:rno:363084 UCSC:RGD:1308852 NextBio:682386
            Genevestigator:Q4JL29 Uniprot:Q4JL29
        Length = 520

 Score = 228 (85.3 bits), Expect = 1.8e-17, Sum P(2) = 1.8e-17
 Identities = 68/215 (31%), Positives = 103/215 (47%)

Query:    78 TTLIGLTFGGYLRSKIKCLKCLGKSELYERMMDLTVEI-------------DGDIGTLEE 124
             +T++   FGG L++++ CL C  +S  ++  +DL+++I             +G + +L +
Sbjct:   307 STVVTTIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRSKRSKNQENGPVCSLRD 366

Query:   125 ALAQFTASEILVGENKYYCSRCKSYEKAKKKLTVLEEPNILTIVLKRFESGNF--GKLNK 182
              L  FT  E L     Y C +CK  +K+ KK  + + P  L + LKRF    +   K++ 
Sbjct:   367 CLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKALCLHLKRFHWTAYLRNKVDT 426

Query:   183 SVWFP-EVLNMAPYM---SRTGDGSPMYSLYAVVVHLDVTNATFSGHYVCYVKNSHE-EW 237
              V FP   L+M  Y+     +G  S +Y L AV VH    +   SGHY  Y    HE  W
Sbjct:   427 YVQFPLRGLDMKCYLLEPENSGPDSCLYDLAAVFVHHG--SGVGSGHYTAYAV--HEGRW 482

Query:   238 FRIDDSTVIPVKLERVLSEEAYMLLYARHSPRPPA 272
             F  +DSTV     E V   +AY+L Y     R  A
Sbjct:   483 FHFNDSTVTVTDEETVGKAKAYILFYVERQARAGA 517

 Score = 55 (24.4 bits), Expect = 1.8e-17, Sum P(2) = 1.8e-17
 Identities = 12/33 (36%), Positives = 19/33 (57%)

Query:    26 SPIGILSKIQKIGSHLGHGREEDAHEFLRCAVD 58
             SP  +   + KI  +    R++DAHEF+R  +D
Sbjct:   238 SPESLFYVVWKIMPNFRGYRQQDAHEFMRYLLD 270


>FB|FBgn0039025 [details] [associations]
            symbol:Usp12-46 "Ubiquitin-specific protease 12/46 ortholog"
            species:7227 "Drosophila melanogaster" [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA]
            [GO:0004221 "ubiquitin thiolesterase activity" evidence=IEA]
            [GO:0045746 "negative regulation of Notch signaling pathway"
            evidence=IGI;IMP] InterPro:IPR001394 InterPro:IPR018200
            Pfam:PF00443 PROSITE:PS00973 PROSITE:PS50235 EMBL:AE014297
            GO:GO:0006511 GO:GO:0004221 HSSP:Q93009 eggNOG:COG5077 KO:K11842
            GeneTree:ENSGT00650000093027 OMA:TEPTWVH UniGene:Dm.11299
            EMBL:BT010235 RefSeq:NP_651099.1 SMR:Q9VCT9 STRING:Q9VCT9
            MEROPS:C19.A23 EnsemblMetazoa:FBtr0084311 GeneID:42702
            KEGG:dme:Dmel_CG7023 UCSC:CG7023-RB FlyBase:FBgn0039025
            InParanoid:Q9VCT9 GenomeRNAi:42702 NextBio:830136 Uniprot:Q9VCT9
        Length = 424

 Score = 220 (82.5 bits), Expect = 1.9e-17, Sum P(2) = 1.9e-17
 Identities = 65/197 (32%), Positives = 97/197 (49%)

Query:    69 GAKGKIAEETTLIGLTFGGYLRSKIKCLKCLGKSELYERMMDLTVEIDGDIGTLEEALAQ 128
             G  G  +E T +  + F G L S+ +CL C   S   E   DL V++D +  ++   L  
Sbjct:   213 GTNGANSEPTWVHEI-FQGILTSETRCLNCETVSSKDENFFDLQVDVDQNT-SITHCLRC 270

Query:   129 FTASEILVGENKYYCSRCKSYEKAKKKLTVLEEPNILTIVLKRFE-SGNFG---KLNKSV 184
             F+ +E L  +NK+ C  C SY++A+K++ V + P IL + LKRF+    F    K++  V
Sbjct:   271 FSNTETLCSDNKFKCDNCCSYQEAQKRMRVKKLPMILALHLKRFKYMEQFNRHIKVSHRV 330

Query:   185 WFPEVLNMAPYMSRTGDGSPMYSLYAVVVHLDVTNATFSGHYVCYVKNSHEEWFRIDDST 244
              FP  L +        +   +Y L AVV+H    +    GHY+  VK SH  W   DD  
Sbjct:   331 VFPLELRLFNTSDDAVNPDRLYDLTAVVIHCG--SGPNRGHYISIVK-SHGLWLLFDDDM 387

Query:   245 VIPVKLERVLSEEAYML 261
             V   K+E    E+ Y L
Sbjct:   388 VD--KIEASTIEDFYGL 402

 Score = 59 (25.8 bits), Expect = 1.9e-17, Sum P(2) = 1.9e-17
 Identities = 14/52 (26%), Positives = 28/52 (53%)

Query:    19 KDGSYPVSPIGILSKIQKIGSHLGHGREEDAHEFLRCAVDTMQSVCLKEFGA 70
             K GS  ++P   +++++K      +  ++DAHEFL   ++ +  + L E  A
Sbjct:    83 KVGS--IAPKKFITRLRKEKEEFDNYMQQDAHEFLNFLINHINEIILAERNA 132


>ZFIN|ZDB-GENE-030131-1949 [details] [associations]
            symbol:usp8 "ubiquitin specific peptidase 8"
            species:7955 "Danio rerio" [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] [GO:0008233 "peptidase
            activity" evidence=IEA] [GO:0016787 "hydrolase activity"
            evidence=IEA] [GO:0008234 "cysteine-type peptidase activity"
            evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
            InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 ZFIN:ZDB-GENE-030131-1949
            GO:GO:0008234 Gene3D:3.40.250.10 InterPro:IPR001763 SUPFAM:SSF52821
            PROSITE:PS50206 GO:GO:0006511 GO:GO:0004221
            GeneTree:ENSGT00670000097591 InterPro:IPR015063 Pfam:PF08969
            EMBL:CU928201 IPI:IPI00613650 Ensembl:ENSDART00000093376
            Uniprot:E7F1N3
        Length = 1099

 Score = 245 (91.3 bits), Expect = 2.3e-17, P = 2.3e-17
 Identities = 72/243 (29%), Positives = 116/243 (47%)

Query:    29 GILSKIQKIGSHLGHGREEDAHEFLRCAVDTMQSVCLKEFGAKGKIAEETTLIGLTFGGY 88
             G+   + K     G+  EE  H      +D + +  L    +K K   E+ ++ L F G 
Sbjct:   867 GLHEDLNKADKRRGYKEEEIEH------LDDVSAADLA--WSKHKQLNESIIVAL-FQGQ 917

Query:    89 LRSKIKCLKCLGKSELYERMMDLTVEIDGD--IGTLEEALAQFTASEILVGENKYYCSRC 146
              +S ++C+ C  KS  +E  M LT+E+         ++ L  F   E L   N++YC  C
Sbjct:   918 FKSTVQCMSCQHKSRTFETFMYLTLEMTASSKCSLQQDCLKLFHKEERLTDGNRFYCRHC 977

Query:   147 KSYEKAKKKLTVLEEPNILTIVLKR-FE-SGNFG-KLNKSVWFP-EVLNMAPYMSRTGDG 202
             K++  A K++ + + P IL + LKR F+  G +  KL   V FP + L+++ Y+    + 
Sbjct:   978 KTHRDAIKRMQIWKLPPILLVHLKRRFKYEGRWREKLQTLVDFPLDNLDLSQYVIGPKNN 1037

Query:   203 SPMYSLYAVVVHLDVTNATFSGHYVCYVKNSHEE-WFRIDDSTVIPVKLERVLSEEAYML 261
                Y+LYAV  H    +    GHY  Y KN  ++ WF+ DD  V  +    V S  AY+ 
Sbjct:  1038 LKKYNLYAVSNHYGGMDG---GHYTAYCKNPMKQRWFKFDDHEVSEISSSTVRSPAAYIF 1094

Query:   262 LYA 264
              Y+
Sbjct:  1095 FYS 1097


>UNIPROTKB|I3L7M6 [details] [associations]
            symbol:USP33 "Ubiquitin carboxyl-terminal hydrolase"
            species:9823 "Sus scrofa" [GO:0071108 "protein K48-linked
            deubiquitination" evidence=IEA] [GO:0070536 "protein K63-linked
            deubiquitination" evidence=IEA] [GO:0044297 "cell body"
            evidence=IEA] [GO:0016477 "cell migration" evidence=IEA]
            [GO:0008277 "regulation of G-protein coupled receptor protein
            signaling pathway" evidence=IEA] [GO:0007411 "axon guidance"
            evidence=IEA] [GO:0004197 "cysteine-type endopeptidase activity"
            evidence=IEA] [GO:0001664 "G-protein coupled receptor binding"
            evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
            [GO:0006511 "ubiquitin-dependent protein catabolic process"
            evidence=IEA] [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=IEA] InterPro:IPR001394 InterPro:IPR001607
            InterPro:IPR006615 InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148
            Pfam:PF06337 PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235
            PROSITE:PS50271 PROSITE:PS51283 SMART:SM00695 GO:GO:0007411
            GO:GO:0016477 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
            InterPro:IPR013083 GO:GO:0006511 GO:GO:0008277 GO:GO:0071108
            GO:GO:0070536 GO:GO:0004197 GO:GO:0044297 GO:GO:0004221
            GeneTree:ENSGT00690000101718 OMA:TMEEDKS EMBL:CU915644
            Ensembl:ENSSSCT00000026836 Uniprot:I3L7M6
        Length = 901

 Score = 214 (80.4 bits), Expect = 4.0e-17, Sum P(3) = 4.0e-17
 Identities = 54/156 (34%), Positives = 82/156 (52%)

Query:   117 GDIGTLEEALAQFTASEILVGENKYYCSRCKSYEKAKKKLTVLEEPNILTIVLKRFESG- 175
             G + TL++ LA F A + L G+N Y C +CK      K   V + P IL I LKRF    
Sbjct:   525 GPVVTLQDCLAAFFARDELKGDNMYSCEKCKKLRNGVKFCKVQKFPEILCIHLKRFRHEL 584

Query:   176 NFG-KLNKSVWFP-EVLNMAPYMSRTGDGSPM-YSLYAVVVHLDVTNATFSGHYVCYVKN 232
              F  K++  V FP E L++ P++++      + Y L +V+ H    +   SGHY+ Y +N
Sbjct:   585 MFSTKISTHVSFPLEGLDLQPFLAKDSPTQIVTYDLLSVICHHGTAS---SGHYIAYCRN 641

Query:   233 S-HEEWFRIDDSTVIPVKLERVLSEEAYMLLYARHS 267
             + +  W+  DD +V  V    V + EAY+L Y + S
Sbjct:   642 NLNNLWYEFDDQSVTEVSESTVQNAEAYVLFYRKSS 677

 Score = 61 (26.5 bits), Expect = 4.0e-17, Sum P(3) = 4.0e-17
 Identities = 19/66 (28%), Positives = 31/66 (46%)

Query:     2 PGLHSTFDVVSCLILNAKDGSYPVSPIGILSKIQKIGSHLGHGREEDAHEFLRCAVDTMQ 61
             P   S   +++ L   ++ GS  V P  +   I+ +        ++DA EFLRC +D + 
Sbjct:   195 PACKSYLKLMTELWHKSRPGS--VVPTNLFQGIKTVNPTFRGYSQQDAQEFLRCLMDLLH 252

Query:    62 SVCLKE 67
                LKE
Sbjct:   253 EE-LKE 257

 Score = 55 (24.4 bits), Expect = 4.0e-17, Sum P(3) = 4.0e-17
 Identities = 15/49 (30%), Positives = 24/49 (48%)

Query:    79 TLIGLTFGGYLRSKIKCLKCLGKSELYERMMDLTVEIDG--DIGTLEEA 125
             ++I   F G + S ++CL C   S   E   DL++ I G  D+  L  +
Sbjct:   442 SVISDIFDGTIISSVQCLTCDRVSVTLETFQDLSLPIPGKEDLAKLHSS 490


>UNIPROTKB|E2RGE7 [details] [associations]
            symbol:USP21 "Ubiquitin carboxyl-terminal hydrolase"
            species:9615 "Canis lupus familiaris" [GO:0019784 "NEDD8-specific
            protease activity" evidence=IEA] [GO:0004843 "ubiquitin-specific
            protease activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent
            protein catabolic process" evidence=IEA] [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 GO:GO:0006511 GO:GO:0004843 GO:GO:0004221
            GO:GO:0019784 CTD:27005 KO:K11833 OMA:NVQPRVG
            GeneTree:ENSGT00670000098024 EMBL:AAEX03018447 EMBL:AAEX03018448
            RefSeq:XP_536136.3 ProteinModelPortal:E2RGE7
            Ensembl:ENSCAFT00000020298 GeneID:478979 KEGG:cfa:478979
            NextBio:20854234 Uniprot:E2RGE7
        Length = 565

 Score = 237 (88.5 bits), Expect = 4.1e-17, Sum P(2) = 4.1e-17
 Identities = 69/204 (33%), Positives = 102/204 (50%)

Query:    76 EETTLIGLTFGGYLRSKIKCLKCLGKSELYERMMDLTVEID--GDIG---TLEEALAQFT 130
             E++ ++ L F G L+S +KC  C  +S  +E   DL++ I   G  G   +L +  + FT
Sbjct:   366 EDSKIVDL-FVGQLKSCLKCQACGYRSTTFEVFCDLSLPIPKKGFAGGKVSLRDCFSLFT 424

Query:   131 ASEILVGENKYYCSRCKSYEKAKKKLTVLEEPNILTIVLKRFES--GNFGKLNKSVWFP- 187
               E L  EN   C RC+   ++ KKLTV   P IL + L RF +  G+  K +  V FP 
Sbjct:   425 KEEELESENAPVCDRCRQKTRSTKKLTVQRFPRILVLHLNRFSASRGSIKKSSVGVDFPL 484

Query:   188 EVLNMAPYMSRTGDGSPMYSLYAVVVHLDVTNATFSGHYVCYVKNSHEEWFRIDDSTVIP 247
             + L++  + S    GSP+Y LYA+  H   + +   GHY    +     W   +DS V P
Sbjct:   485 QRLSLGDFASDKA-GSPVYQLYALCNH---SGSVHYGHYTALCR-CQTGWHVYNDSRVSP 539

Query:   248 VKLERVLSEEAYMLLYARHSPRPP 271
             V   +V S E Y+L Y +    PP
Sbjct:   540 VSENQVASSEGYVLFY-QLMQEPP 562

 Score = 43 (20.2 bits), Expect = 4.1e-17, Sum P(2) = 4.1e-17
 Identities = 12/42 (28%), Positives = 22/42 (52%)

Query:    20 DGSYPVSPIGILSKIQK-IGSHLGHGREEDAHEFLRCAVDTM 60
             D    V+P    +  QK + S  G+  ++DA EFL+  ++ +
Sbjct:   273 DSCEAVNPTRFRAVFQKYVPSFSGYS-QQDAQEFLKLLMERL 313


>UNIPROTKB|F1S196 [details] [associations]
            symbol:USP21 "Ubiquitin carboxyl-terminal hydrolase"
            species:9823 "Sus scrofa" [GO:0019784 "NEDD8-specific protease
            activity" evidence=IEA] [GO:0004843 "ubiquitin-specific protease
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 GO:GO:0006511 GO:GO:0004843 GO:GO:0004221
            GO:GO:0019784 KO:K11833 OMA:NVQPRVG GeneTree:ENSGT00670000098024
            EMBL:CU463216 RefSeq:XP_001927817.1 UniGene:Ssc.6203
            Ensembl:ENSSSCT00000006971 GeneID:100152455 KEGG:ssc:100152455
            Uniprot:F1S196
        Length = 565

 Score = 237 (88.5 bits), Expect = 4.1e-17, Sum P(2) = 4.1e-17
 Identities = 69/204 (33%), Positives = 102/204 (50%)

Query:    76 EETTLIGLTFGGYLRSKIKCLKCLGKSELYERMMDLTVEID--GDIG---TLEEALAQFT 130
             E++ ++ L F G L+S +KC  C  +S  +E   DL++ I   G  G   +L +  + FT
Sbjct:   366 EDSKIVDL-FVGQLKSCLKCQACGYRSTTFEVFCDLSLPIPKKGFAGGKVSLRDCFSLFT 424

Query:   131 ASEILVGENKYYCSRCKSYEKAKKKLTVLEEPNILTIVLKRFES--GNFGKLNKSVWFP- 187
               E L  EN   C RC+   ++ KKLTV   P IL + L RF +  G+  K +  V FP 
Sbjct:   425 KEEELESENAPVCDRCRQKTRSTKKLTVQRFPRILVLHLNRFSASRGSIKKSSVGVDFPL 484

Query:   188 EVLNMAPYMSRTGDGSPMYSLYAVVVHLDVTNATFSGHYVCYVKNSHEEWFRIDDSTVIP 247
             + L++  + S    GSP+Y LYA+  H   + +   GHY    +     W   +DS V P
Sbjct:   485 QRLSLGDFASDKA-GSPIYQLYALCNH---SGSVHYGHYTALCR-CQTGWHVYNDSRVSP 539

Query:   248 VKLERVLSEEAYMLLYARHSPRPP 271
             V   +V S E Y+L Y +    PP
Sbjct:   540 VSENQVASSEGYVLFY-QLMQEPP 562

 Score = 43 (20.2 bits), Expect = 4.1e-17, Sum P(2) = 4.1e-17
 Identities = 12/42 (28%), Positives = 22/42 (52%)

Query:    20 DGSYPVSPIGILSKIQK-IGSHLGHGREEDAHEFLRCAVDTM 60
             D    V+P    +  QK + S  G+  ++DA EFL+  ++ +
Sbjct:   273 DSCEAVNPTRFRAVFQKYVPSFSGYS-QQDAQEFLKLLMERL 313


>UNIPROTKB|I3LBG3 [details] [associations]
            symbol:USP20 "Ubiquitin carboxyl-terminal hydrolase"
            species:9823 "Sus scrofa" [GO:0071108 "protein K48-linked
            deubiquitination" evidence=IEA] [GO:0070536 "protein K63-linked
            deubiquitination" evidence=IEA] [GO:0008277 "regulation of
            G-protein coupled receptor protein signaling pathway" evidence=IEA]
            [GO:0004221 "ubiquitin thiolesterase activity" evidence=IEA]
            [GO:0004197 "cysteine-type endopeptidase activity" evidence=IEA]
            [GO:0001664 "G-protein coupled receptor binding" evidence=IEA]
            [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA]
            InterPro:IPR001394 InterPro:IPR001607 InterPro:IPR006615
            InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 Pfam:PF06337
            PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271
            PROSITE:PS51283 SMART:SM00695 GO:GO:0046872 GO:GO:0008270
            Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511 GO:GO:0008277
            GO:GO:0071108 GO:GO:0070536 GO:GO:0004197 GO:GO:0004221
            GeneTree:ENSGT00690000101718 OMA:ADYGQIS EMBL:CU459043
            Ensembl:ENSSSCT00000023659 Uniprot:I3LBG3
        Length = 918

 Score = 210 (79.0 bits), Expect = 4.2e-17, Sum P(4) = 4.2e-17
 Identities = 57/159 (35%), Positives = 82/159 (51%)

Query:   117 GDIGTLEEALAQFTASEILV--GENKYYCSRCKSYEKAKKKLTVLEEPNILTIVLKRFES 174
             G + TLE+ LA F A++ L   G+N Y C RCK      K   VL+ P IL I LKRF  
Sbjct:   536 GPVVTLEDCLAAFFAADELKAPGDNMYSCERCKKLRNGVKYCKVLQLPEILCIHLKRFRH 595

Query:   175 G---NFGKLNKSVWFP-EVLNMAPYMSRTGDGS-PMYSLYAVVVHLDVTNATFSGHYVCY 229
                 +F K++  V FP E L++ P++++        Y L +V+ H        SGHY+ Y
Sbjct:   596 EVMYSF-KISSHVSFPLEGLDLRPFLAKECTSQITTYDLLSVICHHGTAG---SGHYIAY 651

Query:   230 VKNS-HEEWFRIDDSTVIPVKLERVLSEEAYMLLYARHS 267
              +N  + +W+  DD  V  V    V + EAY+L Y + S
Sbjct:   652 CQNVINGQWYEFDDQYVTEVHETLVQNAEAYVLFYRKSS 690

 Score = 63 (27.2 bits), Expect = 4.2e-17, Sum P(4) = 4.2e-17
 Identities = 17/52 (32%), Positives = 26/52 (50%)

Query:    79 TLIGLTFGGYLRSKIKCLKCLGKSELYERMMDLTVEIDG--DIGTLEEALAQ 128
             ++I   F G + S ++CL C   S   E   DL++ I G  D+  L  A+ Q
Sbjct:   445 SVISDIFDGSILSLVQCLTCDRVSTTVETFQDLSLPIPGKEDLAKLHSAIYQ 496

 Score = 58 (25.5 bits), Expect = 4.2e-17, Sum P(4) = 4.2e-17
 Identities = 18/66 (27%), Positives = 30/66 (45%)

Query:     2 PGLHSTFDVVSCLILNAKDGSYPVSPIGILSKIQKIGSHLGHGREEDAHEFLRCAVDTMQ 61
             P L  ++  +   + + K  SY V P  +   I+ +        ++D  EFLRC +D + 
Sbjct:   195 PALCKSYQKLVTEVWHRKRPSYVV-PTSLSHGIKLVNPMFRGYAQQDTQEFLRCLMDQLH 253

Query:    62 SVCLKE 67
                LKE
Sbjct:   254 EE-LKE 258

 Score = 37 (18.1 bits), Expect = 4.2e-17, Sum P(4) = 4.2e-17
 Identities = 8/26 (30%), Positives = 15/26 (57%)

Query:   254 LSEEAYMLLYARHSPRPPALIRNNVS 279
             +SEE ++ L + +   P   IR +V+
Sbjct:   872 ISEETWVYLLSLYGGGPEIAIRQSVA 897


>UNIPROTKB|Q2UUG8 [details] [associations]
            symbol:creB "Probable ubiquitin carboxyl-terminal hydrolase
            creB" species:510516 "Aspergillus oryzae RIB40" [GO:0004221
            "ubiquitin thiolesterase activity" evidence=ISS] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=ISS]
            [GO:0045013 "carbon catabolite repression of transcription"
            evidence=ISS] InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443
            PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 GO:GO:0008234
            GO:GO:0006511 GO:GO:0004221 eggNOG:COG5533 HOGENOM:HOG000192482
            OrthoDB:EOG43XZCS GO:GO:0045013 EMBL:AP007150 STRING:Q2UUG8
            EnsemblFungi:CADAORAT00003788 GenomeReviews:AP007150_GR
            Uniprot:Q2UUG8
        Length = 754

 Score = 240 (89.5 bits), Expect = 4.5e-17, P = 4.5e-17
 Identities = 79/285 (27%), Positives = 131/285 (45%)

Query:    69 GAKGKIAEETTL-IGLTFGGYLRSKIKCLKCLGKSELYERMMDLTVEIDGDIGTLEEALA 127
             G+ G     TT  +   F G L S+ +CL C   S+  E  +DL+V+++    ++   L 
Sbjct:   260 GSSGSKTPNTTRWVHELFEGTLTSETQCLTCEKVSQRDEVFLDLSVDLEQH-SSVTSCLR 318

Query:   128 QFTASEILVGENKYYCSRCKSYEKAKKKLTVLEEPNILTIVLKRFE-SGNFGKLNK---S 183
             +F+A E+L   NK++C  C   ++A+K++ +   P IL + LKRF+ + +  +L K    
Sbjct:   319 KFSAEEMLCERNKFHCDNCGGLQEAEKRMKIKRLPRILALHLKRFKYTEDLQRLQKLFHR 378

Query:   184 VWFPEVLNMAPYMSRTGDGSPMYSLYAVVVHLDVTNATFSGHYVCYVKNSHEEWFRIDDS 243
             V +P  L +        D   +Y LYAVVVH+      + GHYV  +K     W   DD 
Sbjct:   379 VVYPYHLRLFNTTDDAEDPDRLYELYAVVVHIG--GGPYHGHYVAIIKTQDRGWLLFDDE 436

Query:   244 TVIPVKLERV---LSEE-----AYMLLYARHSPRPPALIRNNVSHGVKSKKKNLEAVDLN 295
              V PV    V     +      AY+L Y   +    A+++      +     N    D+N
Sbjct:   437 MVEPVDKNYVRNFFGDRPGLACAYVLFYQETTLE--AVMKEQEQENMDL---NTSVADIN 491

Query:   296 NTSKIRSNSYIPSLDSKAQQKPCTDSNQLFDRDE-WKFRSMQRSP 339
             + S ++ N Y P     A       ++Q+    E  +F ++QR+P
Sbjct:   492 D-STLKQNGY-PLSPGLAHVH---SASQIPSPSEPARFSNLQRAP 531


>UNIPROTKB|B8NSV5 [details] [associations]
            symbol:creB "Probable ubiquitin carboxyl-terminal hydrolase
            creB" species:332952 "Aspergillus flavus NRRL3357" [GO:0004221
            "ubiquitin thiolesterase activity" evidence=ISS] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=ISS]
            [GO:0045013 "carbon catabolite repression of transcription"
            evidence=ISS] InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443
            PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 GO:GO:0008234
            GO:GO:0006511 GO:GO:0004221 eggNOG:COG5533 HOGENOM:HOG000192482
            KO:K11872 GO:GO:0045013 EMBL:EQ963483 RefSeq:XP_002383274.1
            EnsemblFungi:CADAFLAT00011139 GeneID:7909143 KEGG:afv:AFLA_051480
            Uniprot:B8NSV5
        Length = 755

 Score = 240 (89.5 bits), Expect = 4.5e-17, P = 4.5e-17
 Identities = 79/285 (27%), Positives = 131/285 (45%)

Query:    69 GAKGKIAEETTL-IGLTFGGYLRSKIKCLKCLGKSELYERMMDLTVEIDGDIGTLEEALA 127
             G+ G     TT  +   F G L S+ +CL C   S+  E  +DL+V+++    ++   L 
Sbjct:   261 GSSGSKTPNTTRWVHELFEGTLTSETQCLTCEKVSQRDEVFLDLSVDLEQH-SSVTSCLR 319

Query:   128 QFTASEILVGENKYYCSRCKSYEKAKKKLTVLEEPNILTIVLKRFE-SGNFGKLNK---S 183
             +F+A E+L   NK++C  C   ++A+K++ +   P IL + LKRF+ + +  +L K    
Sbjct:   320 KFSAEEMLCERNKFHCDNCGGLQEAEKRMKIKRLPRILALHLKRFKYTEDLQRLQKLFHR 379

Query:   184 VWFPEVLNMAPYMSRTGDGSPMYSLYAVVVHLDVTNATFSGHYVCYVKNSHEEWFRIDDS 243
             V +P  L +        D   +Y LYAVVVH+      + GHYV  +K     W   DD 
Sbjct:   380 VVYPYHLRLFNTTDDAEDPDRLYELYAVVVHIG--GGPYHGHYVAIIKTQDRGWLLFDDE 437

Query:   244 TVIPVKLERV---LSEE-----AYMLLYARHSPRPPALIRNNVSHGVKSKKKNLEAVDLN 295
              V PV    V     +      AY+L Y   +    A+++      +     N    D+N
Sbjct:   438 MVEPVDKNYVRNFFGDRPGLACAYVLFYQETTLE--AVMKEQEQENMDL---NTSVADIN 492

Query:   296 NTSKIRSNSYIPSLDSKAQQKPCTDSNQLFDRDE-WKFRSMQRSP 339
             + S ++ N Y P     A       ++Q+    E  +F ++QR+P
Sbjct:   493 D-STLKQNGY-PLSPGLAHVH---SASQIPSPSEPARFSNLQRAP 532


>UNIPROTKB|D4D3J1 [details] [associations]
            symbol:TRV_01651 "Ubiquitin C-terminal hydrolase CreB"
            species:663202 "Trichophyton verrucosum HKI 0517" [GO:0004221
            "ubiquitin thiolesterase activity" evidence=ISS] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=ISS]
            [GO:0045013 "carbon catabolite repression of transcription"
            evidence=ISS] InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443
            PROSITE:PS00973 PROSITE:PS50235 GO:GO:0006511 GO:GO:0004221
            KO:K11872 GO:GO:0045013 EMBL:ACYE01000084 RefSeq:XP_003024218.1
            GeneID:9579256 KEGG:tve:TRV_01651 Uniprot:D4D3J1
        Length = 876

 Score = 248 (92.4 bits), Expect = 4.7e-17, Sum P(2) = 4.7e-17
 Identities = 64/208 (30%), Positives = 95/208 (45%)

Query:    46 EEDAHEFLRCAVDTMQSVCLK-EFGAKGKIAEETTLIGLTFGGYLRSKIKCLKCLGKSEL 104
             E DA      A  T  +  L    G   K    T  +   F G L S+ +CL C  KS+ 
Sbjct:   256 EADADSESSTATSTSVATTLATSVGGSAKSPYSTRWVHELFEGKLTSETECLTCEKKSQR 315

Query:   105 YERMMDLTVEIDGDIGTLEEALAQFTASEILVGENKYYCSRCKSYEKAKKKLTVLEEPNI 164
              E  +DL+V+++    ++   L +F+  E+L   NK++C  C   ++A+K++ +   P I
Sbjct:   316 DEAFLDLSVDLEQH-SSVTSCLRKFSQEEMLCERNKFHCDNCGGLQEAEKRMKIKRLPRI 374

Query:   165 LTIVLKRF----ESGNFGKLNKSVWFPEVLNMAPYMSRTGDGSPMYSLYAVVVHLDVTNA 220
             L + LKRF    +     KL   V +P  L +        D   +Y LYAVVVH+     
Sbjct:   375 LALHLKRFKYTEDQQRLQKLFHRVVYPYYLRLFNTTDDAEDPDRLYELYAVVVHIG--GG 432

Query:   221 TFSGHYVCYVKNSHEEWFRIDDSTVIPV 248
              + GHYV  +K     W   DD  V PV
Sbjct:   433 PYHGHYVAIIKTEDRGWLLFDDEMVEPV 460

 Score = 37 (18.1 bits), Expect = 4.7e-17, Sum P(2) = 4.7e-17
 Identities = 9/29 (31%), Positives = 13/29 (44%)

Query:    25 VSPIGILSKIQKIGSHLGHGREEDAHEFL 53
             V P   L  +++          +DAHEFL
Sbjct:   206 VRPQHFLDVLRRENEMFRTAMHQDAHEFL 234


>UNIPROTKB|F1LPJ7 [details] [associations]
            symbol:Usp33 "Ubiquitin carboxyl-terminal hydrolase"
            species:10116 "Rattus norvegicus" [GO:0001664 "G-protein coupled
            receptor binding" evidence=IEA] [GO:0004197 "cysteine-type
            endopeptidase activity" evidence=IEA] [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA]
            [GO:0007411 "axon guidance" evidence=IEA] [GO:0008270 "zinc ion
            binding" evidence=IEA] [GO:0008277 "regulation of G-protein coupled
            receptor protein signaling pathway" evidence=IEA] [GO:0016477 "cell
            migration" evidence=IEA] [GO:0044297 "cell body" evidence=IEA]
            [GO:0070536 "protein K63-linked deubiquitination" evidence=IEA]
            [GO:0071108 "protein K48-linked deubiquitination" evidence=IEA]
            InterPro:IPR001394 InterPro:IPR001607 InterPro:IPR006615
            InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 Pfam:PF06337
            PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271
            PROSITE:PS51283 SMART:SM00695 GO:GO:0046872 GO:GO:0008270
            GO:GO:0008234 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511
            GO:GO:0004221 GeneTree:ENSGT00690000101718 OMA:TMEEDKS
            IPI:IPI00369811 Ensembl:ENSRNOT00000066125 ArrayExpress:F1LPJ7
            Uniprot:F1LPJ7
        Length = 909

 Score = 216 (81.1 bits), Expect = 5.1e-17, Sum P(3) = 5.1e-17
 Identities = 54/156 (34%), Positives = 82/156 (52%)

Query:   117 GDIGTLEEALAQFTASEILVGENKYYCSRCKSYEKAKKKLTVLEEPNILTIVLKRFESG- 175
             G + TL++ LA F A + L G+N Y C +CK      K   V + P IL I LKRF    
Sbjct:   531 GPVVTLQDCLAAFFARDELKGDNMYSCEKCKKLRNGVKFCKVQKFPEILCIHLKRFRHEL 590

Query:   176 NFG-KLNKSVWFP-EVLNMAPYMSRTGDGSPM-YSLYAVVVHLDVTNATFSGHYVCYVKN 232
              F  K++  V FP E L++ P++++      + Y L +V+ H    +   SGHY+ Y +N
Sbjct:   591 MFSTKISTHVSFPLEGLDLQPFLAKDSPAQIVTYDLLSVICHHGTAS---SGHYIAYCRN 647

Query:   233 S-HEEWFRIDDSTVIPVKLERVLSEEAYMLLYARHS 267
             + +  W+  DD +V  V    V + EAY+L Y + S
Sbjct:   648 NLNNLWYEFDDQSVTEVSESTVQNAEAYVLFYRKSS 683

 Score = 58 (25.5 bits), Expect = 5.1e-17, Sum P(3) = 5.1e-17
 Identities = 16/50 (32%), Positives = 25/50 (50%)

Query:    18 AKDGSYPVSPIGILSKIQKIGSHLGHGREEDAHEFLRCAVDTMQSVCLKE 67
             ++ GS  V P  +   I+ +        ++DA EFLRC +D +    LKE
Sbjct:   211 SRPGS--VVPANLFQGIKTVNPTFRGYSQQDAQEFLRCLMDLLHEE-LKE 257

 Score = 55 (24.4 bits), Expect = 5.1e-17, Sum P(3) = 5.1e-17
 Identities = 15/49 (30%), Positives = 24/49 (48%)

Query:    79 TLIGLTFGGYLRSKIKCLKCLGKSELYERMMDLTVEIDG--DIGTLEEA 125
             ++I   F G + S ++CL C   S   E   DL++ I G  D+  L  +
Sbjct:   441 SVISDIFDGTIISSVQCLTCDRVSVTLETFQDLSLPIPGKEDLAKLHSS 489


>UNIPROTKB|Q5REG5 [details] [associations]
            symbol:USP33 "Ubiquitin carboxyl-terminal hydrolase 33"
            species:9601 "Pongo abelii" [GO:0004197 "cysteine-type
            endopeptidase activity" evidence=ISS] [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=ISS] [GO:0007411 "axon guidance"
            evidence=ISS] [GO:0008270 "zinc ion binding" evidence=ISS]
            [GO:0008277 "regulation of G-protein coupled receptor protein
            signaling pathway" evidence=ISS] [GO:0016477 "cell migration"
            evidence=ISS] [GO:0016579 "protein deubiquitination" evidence=ISS]
            [GO:0070536 "protein K63-linked deubiquitination" evidence=ISS]
            [GO:0071108 "protein K48-linked deubiquitination" evidence=ISS]
            InterPro:IPR001394 InterPro:IPR001607 InterPro:IPR006615
            InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 Pfam:PF06337
            PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271
            PROSITE:PS51283 SMART:SM00695 GO:GO:0048471 GO:GO:0007411
            GO:GO:0016477 GO:GO:0046872 GO:GO:0008270 GO:GO:0006897
            Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511 GO:GO:0008277
            GO:GO:0071108 GO:GO:0070536 GO:GO:0004197 GO:GO:0004221
            HOGENOM:HOG000286031 HOVERGEN:HBG054196 KO:K11848 MEROPS:C19.037
            CTD:23032 EMBL:CR857564 EMBL:CR860104 RefSeq:NP_001124855.1
            UniGene:Pab.19411 ProteinModelPortal:Q5REG5 SMR:Q5REG5
            GeneID:100171716 KEGG:pon:100171716 InParanoid:Q5REG5
            Uniprot:Q5REG5
        Length = 914

 Score = 216 (81.1 bits), Expect = 5.2e-17, Sum P(3) = 5.2e-17
 Identities = 54/156 (34%), Positives = 82/156 (52%)

Query:   117 GDIGTLEEALAQFTASEILVGENKYYCSRCKSYEKAKKKLTVLEEPNILTIVLKRFESG- 175
             G + TL++ LA F A + L G+N Y C +CK      K   V + P IL I LKRF    
Sbjct:   532 GPVVTLQDCLAAFFARDELKGDNMYSCEKCKKLRNGVKFCKVQKFPEILCIHLKRFRHEL 591

Query:   176 NFG-KLNKSVWFP-EVLNMAPYMSRTGDGSPM-YSLYAVVVHLDVTNATFSGHYVCYVKN 232
              F  K++  V FP E L++ P++++      + Y L +V+ H    +   SGHY+ Y +N
Sbjct:   592 MFSTKISTHVSFPLEGLDLQPFLAKDSPAQIVTYDLLSVICHHGTAS---SGHYIAYCRN 648

Query:   233 S-HEEWFRIDDSTVIPVKLERVLSEEAYMLLYARHS 267
             + +  W+  DD +V  V    V + EAY+L Y + S
Sbjct:   649 NLNNLWYEFDDQSVTEVSESTVQNAEAYVLFYRKSS 684

 Score = 58 (25.5 bits), Expect = 5.2e-17, Sum P(3) = 5.2e-17
 Identities = 16/50 (32%), Positives = 25/50 (50%)

Query:    18 AKDGSYPVSPIGILSKIQKIGSHLGHGREEDAHEFLRCAVDTMQSVCLKE 67
             ++ GS  V P  +   I+ +        ++DA EFLRC +D +    LKE
Sbjct:   212 SRPGS--VVPTNLFQGIKTVNPTFRGYSQQDAQEFLRCLMDLLHEE-LKE 258

 Score = 55 (24.4 bits), Expect = 5.2e-17, Sum P(3) = 5.2e-17
 Identities = 15/49 (30%), Positives = 24/49 (48%)

Query:    79 TLIGLTFGGYLRSKIKCLKCLGKSELYERMMDLTVEIDG--DIGTLEEA 125
             ++I   F G + S ++CL C   S   E   DL++ I G  D+  L  +
Sbjct:   441 SVISDIFDGTIISSVQCLTCDRVSVTLETFQDLSLPIPGKEDLAKLHSS 489


>UNIPROTKB|F1LRN2 [details] [associations]
            symbol:Usp33 "Ubiquitin carboxyl-terminal hydrolase"
            species:10116 "Rattus norvegicus" [GO:0001664 "G-protein coupled
            receptor binding" evidence=IEA] [GO:0004197 "cysteine-type
            endopeptidase activity" evidence=IEA] [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA]
            [GO:0007411 "axon guidance" evidence=IEA] [GO:0008270 "zinc ion
            binding" evidence=IEA] [GO:0008277 "regulation of G-protein coupled
            receptor protein signaling pathway" evidence=IEA] [GO:0016477 "cell
            migration" evidence=IEA] [GO:0044297 "cell body" evidence=IEA]
            [GO:0070536 "protein K63-linked deubiquitination" evidence=IEA]
            [GO:0071108 "protein K48-linked deubiquitination" evidence=IEA]
            InterPro:IPR001394 InterPro:IPR001607 InterPro:IPR006615
            InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 Pfam:PF06337
            PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271
            PROSITE:PS51283 SMART:SM00695 GO:GO:0007411 GO:GO:0016477
            GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
            GO:GO:0006511 GO:GO:0008277 GO:GO:0071108 GO:GO:0070536
            GO:GO:0004197 GO:GO:0044297 GO:GO:0004221 IPI:IPI00949514
            Ensembl:ENSRNOT00000016022 ArrayExpress:F1LRN2 Uniprot:F1LRN2
        Length = 919

 Score = 216 (81.1 bits), Expect = 5.3e-17, Sum P(3) = 5.3e-17
 Identities = 54/156 (34%), Positives = 82/156 (52%)

Query:   117 GDIGTLEEALAQFTASEILVGENKYYCSRCKSYEKAKKKLTVLEEPNILTIVLKRFESG- 175
             G + TL++ LA F A + L G+N Y C +CK      K   V + P IL I LKRF    
Sbjct:   541 GPVVTLQDCLAAFFARDELKGDNMYSCEKCKKLRNGVKFCKVQKFPEILCIHLKRFRHEL 600

Query:   176 NFG-KLNKSVWFP-EVLNMAPYMSRTGDGSPM-YSLYAVVVHLDVTNATFSGHYVCYVKN 232
              F  K++  V FP E L++ P++++      + Y L +V+ H    +   SGHY+ Y +N
Sbjct:   601 MFSTKISTHVSFPLEGLDLQPFLAKDSPAQIVTYDLLSVICHHGTAS---SGHYIAYCRN 657

Query:   233 S-HEEWFRIDDSTVIPVKLERVLSEEAYMLLYARHS 267
             + +  W+  DD +V  V    V + EAY+L Y + S
Sbjct:   658 NLNNLWYEFDDQSVTEVSESTVQNAEAYVLFYRKSS 693

 Score = 58 (25.5 bits), Expect = 5.3e-17, Sum P(3) = 5.3e-17
 Identities = 16/50 (32%), Positives = 25/50 (50%)

Query:    18 AKDGSYPVSPIGILSKIQKIGSHLGHGREEDAHEFLRCAVDTMQSVCLKE 67
             ++ GS  V P  +   I+ +        ++DA EFLRC +D +    LKE
Sbjct:   229 SRPGS--VVPANLFQGIKTVNPTFRGYSQQDAQEFLRCLMDLLHEE-LKE 275

 Score = 55 (24.4 bits), Expect = 5.3e-17, Sum P(3) = 5.3e-17
 Identities = 15/49 (30%), Positives = 24/49 (48%)

Query:    79 TLIGLTFGGYLRSKIKCLKCLGKSELYERMMDLTVEIDG--DIGTLEEA 125
             ++I   F G + S ++CL C   S   E   DL++ I G  D+  L  +
Sbjct:   459 SVISDIFDGTIISSVQCLTCDRVSVTLETFQDLSLPIPGKEDLAKLHSS 507


>MGI|MGI:1353665 [details] [associations]
            symbol:Usp21 "ubiquitin specific peptidase 21" species:10090
            "Mus musculus" [GO:0003713 "transcription coactivator activity"
            evidence=IDA] [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=ISO;IDA] [GO:0004843 "ubiquitin-specific protease
            activity" evidence=ISO] [GO:0005634 "nucleus" evidence=IC]
            [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IEA] [GO:0006508
            "proteolysis" evidence=IEA] [GO:0006511 "ubiquitin-dependent
            protein catabolic process" evidence=IEA] [GO:0008233 "peptidase
            activity" evidence=IEA] [GO:0008234 "cysteine-type peptidase
            activity" evidence=ISO;IDA] [GO:0016568 "chromatin modification"
            evidence=IEA] [GO:0016578 "histone deubiquitination" evidence=IDA]
            [GO:0016787 "hydrolase activity" evidence=IEA] [GO:0019784
            "NEDD8-specific protease activity" evidence=ISO] [GO:0045893
            "positive regulation of transcription, DNA-dependent" evidence=IDA]
            [GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 MGI:MGI:1353665 GO:GO:0005634 GO:GO:0005737
            GO:GO:0045893 GO:GO:0046872 GO:GO:0006351 GO:GO:0003713
            GO:GO:0006511 GO:GO:0016578 GO:GO:0004843 GO:GO:0004221
            GO:GO:0019784 eggNOG:COG5533 HOGENOM:HOG000231498 MEROPS:C19.034
            CTD:27005 HOVERGEN:HBG011164 KO:K11833 EMBL:AF177759 EMBL:AK011148
            EMBL:BC021903 IPI:IPI00830385 RefSeq:NP_038947.2 UniGene:Mm.27510
            ProteinModelPortal:Q9QZL6 SMR:Q9QZL6 STRING:Q9QZL6
            PhosphoSite:Q9QZL6 PRIDE:Q9QZL6 Ensembl:ENSMUST00000111306
            GeneID:30941 KEGG:mmu:30941 UCSC:uc011wwa.1
            GeneTree:ENSGT00670000098024 NextBio:307382 Bgee:Q9QZL6
            CleanEx:MM_USP21 Genevestigator:Q9QZL6
            GermOnline:ENSMUSG00000053483 Uniprot:Q9QZL6
        Length = 566

 Score = 236 (88.1 bits), Expect = 5.5e-17, Sum P(2) = 5.5e-17
 Identities = 67/196 (34%), Positives = 99/196 (50%)

Query:    76 EETTLIGLTFGGYLRSKIKCLKCLGKSELYERMMDLTVEID--GDIG---TLEEALAQFT 130
             E++ ++ L F G L+S +KC  C  +S  +E   DL++ I   G  G   +L +  + FT
Sbjct:   367 EDSKIVDL-FVGQLKSCLKCQACGYRSTTFEVFCDLSLPIPKKGFAGGKVSLRDCFSLFT 425

Query:   131 ASEILVGENKYYCSRCKSYEKAKKKLTVLEEPNILTIVLKRFES--GNFGKLNKSVWFP- 187
               E L  EN   C RC+   ++ KKLTV   P IL + L RF +  G+  K +  V FP 
Sbjct:   426 KEEELESENAPVCDRCRQKTRSTKKLTVQRFPRILVLHLNRFSTSRGSIKKSSVGVDFPL 485

Query:   188 EVLNMAPYMSRTGDGSPMYSLYAVVVHLDVTNATFSGHYVCYVKNSHEEWFRIDDSTVIP 247
             + L++  + S    GSP+Y LYA+  H   + +   GHY    +     W   +DS V P
Sbjct:   486 QRLSLGDFASDKA-GSPVYQLYALCNH---SGSVHYGHYTALCR-CQTGWHVYNDSRVSP 540

Query:   248 VKLERVLSEEAYMLLY 263
             V   +V S E Y+L Y
Sbjct:   541 VSENQVASSEGYVLFY 556

 Score = 43 (20.2 bits), Expect = 5.5e-17, Sum P(2) = 5.5e-17
 Identities = 12/42 (28%), Positives = 22/42 (52%)

Query:    20 DGSYPVSPIGILSKIQK-IGSHLGHGREEDAHEFLRCAVDTM 60
             D    V+P    +  QK + S  G+  ++DA EFL+  ++ +
Sbjct:   273 DSCEAVNPTRFRAVFQKYVPSFSGYS-QQDAQEFLKLLMERL 313


>FB|FBgn0031187 [details] [associations]
            symbol:CG14619 species:7227 "Drosophila melanogaster"
            [GO:0004843 "ubiquitin-specific protease activity" evidence=TAS]
            [GO:0016579 "protein deubiquitination" evidence=TAS] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA]
            [GO:0004221 "ubiquitin thiolesterase activity" evidence=IEA]
            [GO:0016567 "protein ubiquitination" evidence=IMP]
            InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 EMBL:AE014298 GO:GO:0008234
            GO:GO:0006511 GO:GO:0004221 HSSP:Q93009 KO:K11833
            GeneTree:ENSGT00670000098024 UniGene:Dm.1945 MEROPS:C19.A24
            GeneID:33132 KEGG:dme:Dmel_CG14619 UCSC:CG14619-RA
            FlyBase:FBgn0031187 GenomeRNAi:33132 NextBio:782065 EMBL:BT003648
            EMBL:BT100212 RefSeq:NP_001245799.1 RefSeq:NP_001245800.1
            RefSeq:NP_728455.1 SMR:Q8IQ27 EnsemblMetazoa:FBtr0077349
            EnsemblMetazoa:FBtr0309238 EnsemblMetazoa:FBtr0309239
            InParanoid:Q8IQ27 Uniprot:Q8IQ27
        Length = 938

 Score = 238 (88.8 bits), Expect = 5.9e-17, Sum P(2) = 5.9e-17
 Identities = 64/195 (32%), Positives = 94/195 (48%)

Query:    77 ETTLIGLTFGGYLRSKIKCLKCLGKSELYERMMDLTVEIDGDIGT-LEEALAQFTASEIL 135
             E +L+   F G L+S +KC  C   S  ++   DL+V +       LE  L  F   E+L
Sbjct:   747 ENSLVRDLFVGQLKSTLKCTTCGNTSVTFDPFWDLSVPLPSSSRCKLEACLDLFIREEVL 806

Query:   136 VGENKYYCSRCKSYEKAKKKLTVLEEPNILTIVLKRFESGNFGKLNKSVWFP---EVLNM 192
              G+    C++CK+  K  K  T+   P  L I LKRF    + KL+  V FP     LNM
Sbjct:   807 DGDEMPTCAKCKTRRKCTKSFTIQRFPKYLVIHLKRFSETRWSKLSNIVEFPTSDSELNM 866

Query:   193 APYMSRTGDGSPMYSLYAVVVHLDVTNATFSGHYVCYVKNS-HEEWFRIDDSTVIPVKLE 251
               Y + + + +  YSLYA+  H+    +T  GHYV   K+    +W   +D+ V     E
Sbjct:   867 GSYGANS-NSNVHYSLYAISNHM---GSTAGGHYVALCKHPVSRKWHEFNDNIVSDALSE 922

Query:   252 R-VLSEEAYMLLYAR 265
               ++S  AY+L Y R
Sbjct:   923 NHLVSSSAYILFYER 937

 Score = 48 (22.0 bits), Expect = 5.9e-17, Sum P(2) = 5.9e-17
 Identities = 11/28 (39%), Positives = 17/28 (60%)

Query:    46 EEDAHEFLRCAVDTMQSVCLKEFGAKGK 73
             ++DA EFLR  +D++ S      G KG+
Sbjct:   697 QQDAQEFLRFFLDSLHSAL--NSGVKGE 722


>UNIPROTKB|J9NW59 [details] [associations]
            symbol:USP33 "Ubiquitin carboxyl-terminal hydrolase"
            species:9615 "Canis lupus familiaris" [GO:0008234 "cysteine-type
            peptidase activity" evidence=IEA] [GO:0008270 "zinc ion binding"
            evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
            process" evidence=IEA] [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] InterPro:IPR001394 InterPro:IPR001607
            InterPro:IPR006615 InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148
            Pfam:PF06337 PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235
            PROSITE:PS50271 PROSITE:PS51283 SMART:SM00695 GO:GO:0046872
            GO:GO:0008270 GO:GO:0008234 Gene3D:3.30.40.10 InterPro:IPR013083
            GO:GO:0006511 GO:GO:0004221 GeneTree:ENSGT00690000101718
            EMBL:AAEX03004889 Ensembl:ENSCAFT00000045024 Uniprot:J9NW59
        Length = 912

 Score = 217 (81.4 bits), Expect = 6.2e-17, Sum P(3) = 6.2e-17
 Identities = 55/156 (35%), Positives = 82/156 (52%)

Query:   117 GDIGTLEEALAQFTASEILVGENKYYCSRCKSYEKAKKKLTVLEEPNILTIVLKRFESG- 175
             G I TL++ LA F A + L G+N Y C +CK      K   V + P IL I LKRF    
Sbjct:   534 GPIVTLQDCLAAFFARDELKGDNMYSCEKCKKLRNGVKFCKVQKFPEILCIHLKRFRHEL 593

Query:   176 NFG-KLNKSVWFP-EVLNMAPYMSRTGDGSPM-YSLYAVVVHLDVTNATFSGHYVCYVKN 232
              F  K++  V FP E L++ P++++      + Y L +V+ H    +   SGHY+ Y +N
Sbjct:   594 MFSTKISTHVSFPLEGLDLQPFLAKDSPAQIVTYDLLSVICHHGTAS---SGHYIAYCRN 650

Query:   233 S-HEEWFRIDDSTVIPVKLERVLSEEAYMLLYARHS 267
             + +  W+  DD +V  V    V + EAY+L Y + S
Sbjct:   651 NLNNLWYEFDDQSVTEVSESTVQNAEAYVLFYRKSS 686

 Score = 56 (24.8 bits), Expect = 6.2e-17, Sum P(3) = 6.2e-17
 Identities = 16/50 (32%), Positives = 25/50 (50%)

Query:    18 AKDGSYPVSPIGILSKIQKIGSHLGHGREEDAHEFLRCAVDTMQSVCLKE 67
             ++ GS  V P  +   I+ +        ++DA EFLRC +D +    LKE
Sbjct:   212 SRPGS--VVPTTLFQGIKTVNPTFRGYSQQDAQEFLRCLMDLLHEE-LKE 258

 Score = 55 (24.4 bits), Expect = 6.2e-17, Sum P(3) = 6.2e-17
 Identities = 15/49 (30%), Positives = 24/49 (48%)

Query:    79 TLIGLTFGGYLRSKIKCLKCLGKSELYERMMDLTVEIDG--DIGTLEEA 125
             ++I   F G + S ++CL C   S   E   DL++ I G  D+  L  +
Sbjct:   443 SVISDIFDGTIISSVQCLTCDRVSVTLETFQDLSLPIPGKEDLAKLHSS 491


>UNIPROTKB|F1RTR5 [details] [associations]
            symbol:LOC100519179 "Ubiquitin carboxyl-terminal hydrolase"
            species:9823 "Sus scrofa" [GO:0008234 "cysteine-type peptidase
            activity" evidence=IEA] [GO:0008270 "zinc ion binding"
            evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
            process" evidence=IEA] [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] InterPro:IPR001394 InterPro:IPR001607
            InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271 GO:GO:0046872
            GO:GO:0008270 GO:GO:0008234 Gene3D:3.30.40.10 InterPro:IPR013083
            GO:GO:0006511 GO:GO:0004221 KO:K11366 GeneTree:ENSGT00690000101718
            OMA:FISFPLE EMBL:FP017286 RefSeq:XP_003135158.1 UniGene:Ssc.94644
            Ensembl:ENSSSCT00000013504 GeneID:100519179 KEGG:ssc:100519179
            Uniprot:F1RTR5
        Length = 710

 Score = 202 (76.2 bits), Expect = 7.1e-17, Sum P(2) = 7.1e-17
 Identities = 52/159 (32%), Positives = 82/159 (51%)

Query:   121 TLEEALAQFTASEILVGENKYYCSRCKSYEKAKKKLTVLEEPNILTIVLKRFES-GNFG- 178
             +L + L  FT  E L    K  CS C+SY+++ K+LT+ + P +    +KRFE  G    
Sbjct:   547 SLTDCLQWFTRREHLGSSAKIKCSSCQSYQESTKQLTMKKLPIVACFHIKRFEHVGKQRR 606

Query:   179 KLNKSVWFPEVLNMAPYMSRTG-----------DGSPM---YSLYAVVVHLDVTNATFSG 224
             K+N  + FP  L+M P++S T            D +P+   YSL+AV+ H        SG
Sbjct:   607 KINTFISFPLELDMTPFLSSTKESKMKERQPQTDYAPIENKYSLFAVINHHGTLE---SG 663

Query:   225 HYVCYVKNSHEEWFRIDDSTVIPVKLERVLSEEAYMLLY 263
             HY  +++   ++WF  DD+ +    +E +L  E Y+L Y
Sbjct:   664 HYTSFIRQQKDQWFSCDDAVITKATIEDLLYSEGYLLFY 702

 Score = 83 (34.3 bits), Expect = 7.1e-17, Sum P(2) = 7.1e-17
 Identities = 29/102 (28%), Positives = 45/102 (44%)

Query:    24 PVSPIGILSKIQKIGSHLGHGREEDAHEFLRCAVDTMQSVCLKEFGAKGKIAEETT---- 79
             P  P  +L  I     HL   R++DAHEFL   +D +     KE  + G+ A        
Sbjct:   424 PHIPYKLLHLIWIHAEHLAGYRQQDAHEFLIAILDVLHRHS-KE-DSVGQEASNPNCCNC 481

Query:    80 LIGLTFGGYLRSKIKCLKCLGKSELYERMMDLTVEIDGDIGT 121
             +I   F G L+S + C  C   S   +   D+++++ G   T
Sbjct:   482 IIDHIFTGGLQSDVTCQVCHTVSTTIDPCWDISLDLPGSCAT 523


>UNIPROTKB|F1P6Y2 [details] [associations]
            symbol:USP33 "Ubiquitin carboxyl-terminal hydrolase"
            species:9615 "Canis lupus familiaris" [GO:0071108 "protein
            K48-linked deubiquitination" evidence=IEA] [GO:0070536 "protein
            K63-linked deubiquitination" evidence=IEA] [GO:0044297 "cell body"
            evidence=IEA] [GO:0016477 "cell migration" evidence=IEA]
            [GO:0008277 "regulation of G-protein coupled receptor protein
            signaling pathway" evidence=IEA] [GO:0007411 "axon guidance"
            evidence=IEA] [GO:0004197 "cysteine-type endopeptidase activity"
            evidence=IEA] [GO:0001664 "G-protein coupled receptor binding"
            evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
            [GO:0006511 "ubiquitin-dependent protein catabolic process"
            evidence=IEA] [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=IEA] InterPro:IPR001394 InterPro:IPR001607
            InterPro:IPR006615 InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148
            Pfam:PF06337 PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235
            PROSITE:PS50271 PROSITE:PS51283 SMART:SM00695 GO:GO:0007411
            GO:GO:0016477 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
            InterPro:IPR013083 GO:GO:0006511 GO:GO:0008277 GO:GO:0071108
            GO:GO:0070536 GO:GO:0004197 GO:GO:0044297 GO:GO:0004221
            GeneTree:ENSGT00690000101718 OMA:TMEEDKS EMBL:AAEX03004889
            Ensembl:ENSCAFT00000032445 Uniprot:F1P6Y2
        Length = 947

 Score = 217 (81.4 bits), Expect = 7.3e-17, Sum P(3) = 7.3e-17
 Identities = 55/156 (35%), Positives = 82/156 (52%)

Query:   117 GDIGTLEEALAQFTASEILVGENKYYCSRCKSYEKAKKKLTVLEEPNILTIVLKRFESG- 175
             G I TL++ LA F A + L G+N Y C +CK      K   V + P IL I LKRF    
Sbjct:   567 GPIVTLQDCLAAFFARDELKGDNMYSCEKCKKLRNGVKFCKVQKFPEILCIHLKRFRHEL 626

Query:   176 NFG-KLNKSVWFP-EVLNMAPYMSRTGDGSPM-YSLYAVVVHLDVTNATFSGHYVCYVKN 232
              F  K++  V FP E L++ P++++      + Y L +V+ H    +   SGHY+ Y +N
Sbjct:   627 MFSTKISTHVSFPLEGLDLQPFLAKDSPAQIVTYDLLSVICHHGTAS---SGHYIAYCRN 683

Query:   233 S-HEEWFRIDDSTVIPVKLERVLSEEAYMLLYARHS 267
             + +  W+  DD +V  V    V + EAY+L Y + S
Sbjct:   684 NLNNLWYEFDDQSVTEVSESTVQNAEAYVLFYRKSS 719

 Score = 56 (24.8 bits), Expect = 7.3e-17, Sum P(3) = 7.3e-17
 Identities = 16/50 (32%), Positives = 25/50 (50%)

Query:    18 AKDGSYPVSPIGILSKIQKIGSHLGHGREEDAHEFLRCAVDTMQSVCLKE 67
             ++ GS  V P  +   I+ +        ++DA EFLRC +D +    LKE
Sbjct:   243 SRPGS--VVPTTLFQGIKTVNPTFRGYSQQDAQEFLRCLMDLLHEE-LKE 289

 Score = 55 (24.4 bits), Expect = 7.3e-17, Sum P(3) = 7.3e-17
 Identities = 15/49 (30%), Positives = 24/49 (48%)

Query:    79 TLIGLTFGGYLRSKIKCLKCLGKSELYERMMDLTVEIDG--DIGTLEEA 125
             ++I   F G + S ++CL C   S   E   DL++ I G  D+  L  +
Sbjct:   476 SVISDIFDGTIISSVQCLTCDRVSVTLETFQDLSLPIPGKEDLAKLHSS 524


>UNIPROTKB|Q0CT11 [details] [associations]
            symbol:creB "Probable ubiquitin carboxyl-terminal hydrolase
            creB" species:341663 "Aspergillus terreus NIH2624" [GO:0004221
            "ubiquitin thiolesterase activity" evidence=ISS] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=ISS]
            [GO:0045013 "carbon catabolite repression of transcription"
            evidence=ISS] InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443
            PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 GO:GO:0008234
            EMBL:CH476597 GO:GO:0006511 GO:GO:0004221 eggNOG:COG5533
            HOGENOM:HOG000192482 OrthoDB:EOG43XZCS GO:GO:0045013
            RefSeq:XP_001212351.1 EnsemblFungi:CADATEAT00006518 GeneID:4317779
            Uniprot:Q0CT11
        Length = 768

 Score = 238 (88.8 bits), Expect = 7.8e-17, P = 7.8e-17
 Identities = 60/192 (31%), Positives = 96/192 (50%)

Query:    62 SVCLKEFGAKGKIAEETTL-IGLTFGGYLRSKIKCLKCLGKSELYERMMDLTVEIDGDIG 120
             S  ++  G+ G     TT  +   F G L S+ +CL C   S+  E  +DL+V+++    
Sbjct:   254 SESVEHSGSSGSKTPNTTRWVHELFEGTLTSETQCLTCEKVSQRDEVFLDLSVDLEQH-S 312

Query:   121 TLEEALAQFTASEILVGENKYYCSRCKSYEKAKKKLTVLEEPNILTIVLKRFE-SGNFGK 179
             ++   L +F+A E+L   NK++C  C   ++A+K++ +   P IL + LKRF+ + +  +
Sbjct:   313 SVTSCLRKFSAEEMLCERNKFHCDNCGGLQEAEKRMKIKRLPRILALHLKRFKYTEDLQR 372

Query:   180 LNK---SVWFPEVLNMAPYMSRTGDGSPMYSLYAVVVHLDVTNATFSGHYVCYVKNSHEE 236
             L K    V +P  L +        D   +Y LYAVVVH+      + GHYV  +K     
Sbjct:   373 LQKLFHRVVYPYHLRLFNTTDDAEDPDRLYELYAVVVHIG--GGPYHGHYVAIIKTQDRG 430

Query:   237 WFRIDDSTVIPV 248
             W   DD  V PV
Sbjct:   431 WLLFDDEMVEPV 442


>MGI|MGI:2159711 [details] [associations]
            symbol:Usp33 "ubiquitin specific peptidase 33" species:10090
            "Mus musculus" [GO:0001664 "G-protein coupled receptor binding"
            evidence=ISO] [GO:0004197 "cysteine-type endopeptidase activity"
            evidence=ISO] [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=ISO] [GO:0004843 "ubiquitin-specific protease activity"
            evidence=ISA] [GO:0005515 "protein binding" evidence=IPI]
            [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006508 "proteolysis"
            evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
            process" evidence=IEA] [GO:0006897 "endocytosis" evidence=IEA]
            [GO:0007411 "axon guidance" evidence=IMP] [GO:0008152 "metabolic
            process" evidence=ISA] [GO:0008233 "peptidase activity"
            evidence=IEA] [GO:0008234 "cysteine-type peptidase activity"
            evidence=IEA] [GO:0008270 "zinc ion binding" evidence=ISO]
            [GO:0008277 "regulation of G-protein coupled receptor protein
            signaling pathway" evidence=ISO] [GO:0016477 "cell migration"
            evidence=IMP] [GO:0016579 "protein deubiquitination" evidence=ISO]
            [GO:0016787 "hydrolase activity" evidence=IEA] [GO:0044297 "cell
            body" evidence=IDA] [GO:0046872 "metal ion binding" evidence=IEA]
            [GO:0070536 "protein K63-linked deubiquitination" evidence=ISO]
            [GO:0071108 "protein K48-linked deubiquitination" evidence=ISO]
            InterPro:IPR001394 InterPro:IPR001607 InterPro:IPR006615
            InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 Pfam:PF06337
            PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271
            PROSITE:PS51283 SMART:SM00695 MGI:MGI:2159711 GO:GO:0048471
            GO:GO:0007411 GO:GO:0016477 GO:GO:0046872 GO:GO:0008270
            GO:GO:0006897 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511
            GO:GO:0008277 GO:GO:0071108 GO:GO:0070536 GO:GO:0004197
            GO:GO:0044297 GO:GO:0004843 GO:GO:0004221 HSSP:Q93009
            eggNOG:COG5560 GeneTree:ENSGT00690000101718 HOGENOM:HOG000286031
            HOVERGEN:HBG054196 KO:K11848 MEROPS:C19.037 CTD:23032 OMA:TMEEDKS
            OrthoDB:EOG4B8JC9 EMBL:AF383174 EMBL:BC005506 EMBL:BC031366
            EMBL:BC089315 EMBL:AK143844 IPI:IPI00319995 IPI:IPI00798461
            RefSeq:NP_001239415.1 RefSeq:NP_573510.2 UniGene:Mm.258320
            ProteinModelPortal:Q8R5K2 SMR:Q8R5K2 STRING:Q8R5K2
            PhosphoSite:Q8R5K2 PaxDb:Q8R5K2 PRIDE:Q8R5K2 DNASU:170822
            Ensembl:ENSMUST00000026507 Ensembl:ENSMUST00000117492 GeneID:170822
            KEGG:mmu:170822 UCSC:uc008rti.1 UCSC:uc008rtj.1 InParanoid:Q8R5K2
            NextBio:370477 Bgee:Q8R5K2 Genevestigator:Q8R5K2 Uniprot:Q8R5K2
        Length = 909

 Score = 216 (81.1 bits), Expect = 8.1e-17, Sum P(3) = 8.1e-17
 Identities = 54/156 (34%), Positives = 82/156 (52%)

Query:   117 GDIGTLEEALAQFTASEILVGENKYYCSRCKSYEKAKKKLTVLEEPNILTIVLKRFESG- 175
             G + TL++ LA F A + L G+N Y C +CK      K   V + P IL I LKRF    
Sbjct:   531 GPVVTLQDCLAAFFARDELKGDNMYSCEKCKKLRNGVKFCKVQKFPEILCIHLKRFRHEL 590

Query:   176 NFG-KLNKSVWFP-EVLNMAPYMSRTGDGSPM-YSLYAVVVHLDVTNATFSGHYVCYVKN 232
              F  K++  V FP E L++ P++++      + Y L +V+ H    +   SGHY+ Y +N
Sbjct:   591 MFSTKISTHVSFPLEGLDLQPFLAKDSPAQIVTYDLLSVICHHGTAS---SGHYIAYCRN 647

Query:   233 S-HEEWFRIDDSTVIPVKLERVLSEEAYMLLYARHS 267
             + +  W+  DD +V  V    V + EAY+L Y + S
Sbjct:   648 NLNNLWYEFDDQSVTEVSESTVQNAEAYVLFYRKSS 683

 Score = 58 (25.5 bits), Expect = 8.1e-17, Sum P(3) = 8.1e-17
 Identities = 16/50 (32%), Positives = 25/50 (50%)

Query:    18 AKDGSYPVSPIGILSKIQKIGSHLGHGREEDAHEFLRCAVDTMQSVCLKE 67
             ++ GS  V P  +   I+ +        ++DA EFLRC +D +    LKE
Sbjct:   212 SRPGS--VVPANLFQGIKTVNPTFRGYSQQDAQEFLRCLMDLLHEE-LKE 258

 Score = 53 (23.7 bits), Expect = 8.1e-17, Sum P(3) = 8.1e-17
 Identities = 15/49 (30%), Positives = 24/49 (48%)

Query:    79 TLIGLTFGGYLRSKIKCLKCLGKSELYERMMDLTVEIDG--DIGTLEEA 125
             ++I   F G + S ++CL C   S   E   DL++ I G  D+  L  +
Sbjct:   441 SVISDIFDGTVISSVQCLTCDRVSITLETFQDLSLPIPGKEDLAKLHSS 489


>ZFIN|ZDB-GENE-070705-213 [details] [associations]
            symbol:usp46 "ubiquitin specific peptidase 46"
            species:7955 "Danio rerio" [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA;ISS] [GO:0016579 "protein
            deubiquitination" evidence=ISS] [GO:0004843 "ubiquitin-specific
            protease activity" evidence=ISS] [GO:0007610 "behavior"
            evidence=IEA;ISS] [GO:0032228 "regulation of synaptic transmission,
            GABAergic" evidence=ISS] [GO:0016787 "hydrolase activity"
            evidence=IEA] [GO:0008233 "peptidase activity" evidence=IEA]
            [GO:0006508 "proteolysis" evidence=IEA] [GO:0008234 "cysteine-type
            peptidase activity" evidence=IEA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 ZFIN:ZDB-GENE-070705-213 GO:GO:0008234
            GO:GO:0006511 GO:GO:0004221 EMBL:CT827859
            GeneTree:ENSGT00650000093027 EMBL:CU693368 IPI:IPI00774667
            Ensembl:ENSDART00000066678 Bgee:F1REW3 Uniprot:F1REW3
        Length = 375

 Score = 213 (80.0 bits), Expect = 9.0e-17, Sum P(2) = 9.0e-17
 Identities = 64/193 (33%), Positives = 96/193 (49%)

Query:    77 ETTLIGLTFGGYLRSKIKCLKCLGKSELYERMMDLTVEIDGDIGTLEEALAQFTASEILV 136
             + T +   F G L ++ +CL C   S   E  +DL+V+++ +  ++   L  F+ +E L 
Sbjct:   172 DPTWVHEIFQGTLTNETRCLNCETVSSKDEDFLDLSVDVEQNT-SITHCLRDFSNTETLC 230

Query:   137 GENKYYCSRCKSYEKAKKKLTVLEE-PNILTIVLKRF----ESGNFGKLNKSVWFPEVLN 191
              E KYYC  C S ++A+K+  V  + P IL + LKRF    +   + KL+  V FP  L 
Sbjct:   231 SEYKYYCEMCCSKQEAQKRRLVSSKIPKILALHLKRFKYMEQLHRYTKLSYRVVFPLELR 290

Query:   192 MAPYMSRTGDG---SPMYSLYAVVVHLDVTNATFSGHYVCYVKNSHEEWFRIDDSTVIPV 248
             +    + +GD      MY L AVVVH    +    GHY+  VK SH  W   DD  V  +
Sbjct:   291 L---FNTSGDAVNLDRMYDLVAVVVHCG--SGPNRGHYITIVK-SHGFWLLFDDDIVEKI 344

Query:   249 KLERVLSEEAYML 261
               + +  EE Y L
Sbjct:   345 DAQAI--EEFYGL 355

 Score = 57 (25.1 bits), Expect = 9.0e-17, Sum P(2) = 9.0e-17
 Identities = 11/43 (25%), Positives = 24/43 (55%)

Query:    25 VSPIGILSKIQKIGSHLGHGREEDAHEFLRCAVDTMQSVCLKE 67
             + P   +S+++K      +  ++DAHEFL   ++T+  +  +E
Sbjct:   101 IPPKKFISRLRKENDLFDNYMQQDAHEFLNYLLNTVADILQEE 143


>UNIPROTKB|F1MH36 [details] [associations]
            symbol:USP21 "Ubiquitin carboxyl-terminal hydrolase"
            species:9913 "Bos taurus" [GO:0019784 "NEDD8-specific protease
            activity" evidence=IEA] [GO:0004843 "ubiquitin-specific protease
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 GO:GO:0006511 GO:GO:0004843 GO:GO:0004221
            GO:GO:0019784 IPI:IPI00715496 UniGene:Bt.24990 OMA:NVQPRVG
            GeneTree:ENSGT00670000098024 EMBL:DAAA02006959
            Ensembl:ENSBTAT00000029184 Uniprot:F1MH36
        Length = 565

 Score = 234 (87.4 bits), Expect = 9.2e-17, Sum P(2) = 9.2e-17
 Identities = 69/204 (33%), Positives = 101/204 (49%)

Query:    76 EETTLIGLTFGGYLRSKIKCLKCLGKSELYERMMDLTVEID--GDIG---TLEEALAQFT 130
             E++ ++ L F G L+S +KC  C  +S  +E   DL++ I   G  G   +L +    FT
Sbjct:   366 EDSKIVDL-FVGQLKSCLKCQACGYRSTTFEVFCDLSLPIPKKGFAGGKVSLRDCFNLFT 424

Query:   131 ASEILVGENKYYCSRCKSYEKAKKKLTVLEEPNILTIVLKRFES--GNFGKLNKSVWFP- 187
               E L  EN   C RC+   ++ KKLTV   P IL + L RF +  G+  K +  V FP 
Sbjct:   425 KEEELESENAPVCDRCRQKTRSTKKLTVQRFPRILVLHLNRFSASRGSIKKSSVGVDFPL 484

Query:   188 EVLNMAPYMSRTGDGSPMYSLYAVVVHLDVTNATFSGHYVCYVKNSHEEWFRIDDSTVIP 247
             + L++  + S    GSP+Y LYA+  H   + +   GHY    +     W   +DS V P
Sbjct:   485 QRLSLGDFASDKA-GSPVYQLYALCNH---SGSVHYGHYTALCR-CQTGWHVYNDSRVSP 539

Query:   248 VKLERVLSEEAYMLLYARHSPRPP 271
             V   +V S E Y+L Y +    PP
Sbjct:   540 VSENQVASSEGYVLFY-QLMQEPP 562

 Score = 43 (20.2 bits), Expect = 9.2e-17, Sum P(2) = 9.2e-17
 Identities = 12/42 (28%), Positives = 22/42 (52%)

Query:    20 DGSYPVSPIGILSKIQK-IGSHLGHGREEDAHEFLRCAVDTM 60
             D    V+P    +  QK + S  G+  ++DA EFL+  ++ +
Sbjct:   273 DSCEAVNPTRFRAVFQKYVPSFSGYS-QQDAQEFLKLLMERL 313


>UNIPROTKB|Q2KJ72 [details] [associations]
            symbol:USP21 "Ubiquitin carboxyl-terminal hydrolase 21"
            species:9913 "Bos taurus" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=ISS] [GO:0004843 "ubiquitin-specific protease
            activity" evidence=ISS] [GO:0019784 "NEDD8-specific protease
            activity" evidence=ISS] [GO:0008234 "cysteine-type peptidase
            activity" evidence=ISS] [GO:0045893 "positive regulation of
            transcription, DNA-dependent" evidence=ISS] [GO:0016578 "histone
            deubiquitination" evidence=ISS] [GO:0003713 "transcription
            coactivator activity" evidence=ISS] [GO:0005737 "cytoplasm"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0046872
            "metal ion binding" evidence=IEA] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0006511 "ubiquitin-dependent
            protein catabolic process" evidence=IEA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 GO:GO:0005634 GO:GO:0005737 GO:GO:0045893
            GO:GO:0046872 GO:GO:0006351 GO:GO:0003713 GO:GO:0006511
            GO:GO:0016578 GO:GO:0004843 GO:GO:0004221 GO:GO:0019784
            eggNOG:COG5533 HOGENOM:HOG000231498 HSSP:P43593 EMBL:BC105488
            IPI:IPI00715496 RefSeq:NP_001039841.1 UniGene:Bt.24990
            ProteinModelPortal:Q2KJ72 MEROPS:C19.034 GeneID:534273
            KEGG:bta:534273 CTD:27005 HOVERGEN:HBG011164 InParanoid:Q2KJ72
            KO:K11833 OrthoDB:EOG4229JD NextBio:20876334 Uniprot:Q2KJ72
        Length = 565

 Score = 234 (87.4 bits), Expect = 9.2e-17, Sum P(2) = 9.2e-17
 Identities = 69/204 (33%), Positives = 101/204 (49%)

Query:    76 EETTLIGLTFGGYLRSKIKCLKCLGKSELYERMMDLTVEID--GDIG---TLEEALAQFT 130
             E++ ++ L F G L+S +KC  C  +S  +E   DL++ I   G  G   +L +    FT
Sbjct:   366 EDSKIVDL-FVGQLKSCLKCQACGYRSTTFEVFCDLSLPIPKKGFAGGKVSLRDCFNLFT 424

Query:   131 ASEILVGENKYYCSRCKSYEKAKKKLTVLEEPNILTIVLKRFES--GNFGKLNKSVWFP- 187
               E L  EN   C RC+   ++ KKLTV   P IL + L RF +  G+  K +  V FP 
Sbjct:   425 KEEELESENAPVCDRCRQKTRSTKKLTVQRFPRILVLHLNRFSASRGSIKKSSVGVDFPL 484

Query:   188 EVLNMAPYMSRTGDGSPMYSLYAVVVHLDVTNATFSGHYVCYVKNSHEEWFRIDDSTVIP 247
             + L++  + S    GSP+Y LYA+  H   + +   GHY    +     W   +DS V P
Sbjct:   485 QRLSLGDFASDKA-GSPVYQLYALCNH---SGSVHYGHYTALCR-CQTGWHVYNDSRVSP 539

Query:   248 VKLERVLSEEAYMLLYARHSPRPP 271
             V   +V S E Y+L Y +    PP
Sbjct:   540 VSENQVASSEGYVLFY-QLMQEPP 562

 Score = 43 (20.2 bits), Expect = 9.2e-17, Sum P(2) = 9.2e-17
 Identities = 12/42 (28%), Positives = 22/42 (52%)

Query:    20 DGSYPVSPIGILSKIQK-IGSHLGHGREEDAHEFLRCAVDTM 60
             D    V+P    +  QK + S  G+  ++DA EFL+  ++ +
Sbjct:   273 DSCEAVNPTRFRAVFQKYVPSFSGYS-QQDAQEFLKLLMERL 313


>UNIPROTKB|Q9UK80 [details] [associations]
            symbol:USP21 "Ubiquitin carboxyl-terminal hydrolase 21"
            species:9606 "Homo sapiens" [GO:0006511 "ubiquitin-dependent
            protein catabolic process" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0046872 "metal ion
            binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0005737 "cytoplasm" evidence=IEA] [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=ISS;IDA;TAS] [GO:0006464 "cellular
            protein modification process" evidence=NAS] [GO:0008234
            "cysteine-type peptidase activity" evidence=ISS;IMP] [GO:0003713
            "transcription coactivator activity" evidence=ISS] [GO:0016578
            "histone deubiquitination" evidence=ISS] [GO:0045893 "positive
            regulation of transcription, DNA-dependent" evidence=ISS]
            [GO:0019784 "NEDD8-specific protease activity" evidence=IDA]
            [GO:0004843 "ubiquitin-specific protease activity" evidence=IDA]
            [GO:0005575 "cellular_component" evidence=ND] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 GO:GO:0005634 GO:GO:0005737 GO:GO:0045893
            GO:GO:0046872 GO:GO:0006351 GO:GO:0003713 GO:GO:0006511
            EMBL:CH471121 EMBL:AL590714 GO:GO:0016578 GO:GO:0004843
            GO:GO:0004221 GO:GO:0019784 eggNOG:COG5533 PDB:2Y5B PDB:3I3T
            PDB:3MTN PDBsum:2Y5B PDBsum:3I3T PDBsum:3MTN MEROPS:C19.034
            CTD:27005 HOVERGEN:HBG011164 KO:K11833 OrthoDB:EOG4229JD
            EMBL:AF177758 EMBL:AF233442 EMBL:AK292319 EMBL:AF217979
            EMBL:AB208899 EMBL:BC003130 EMBL:BC090946 EMBL:BC136291
            IPI:IPI00007262 IPI:IPI00376946 IPI:IPI00873033
            RefSeq:NP_001014443.1 RefSeq:NP_036607.3 UniGene:Hs.8015
            ProteinModelPortal:Q9UK80 SMR:Q9UK80 IntAct:Q9UK80 STRING:Q9UK80
            PhosphoSite:Q9UK80 DMDM:10720334 PRIDE:Q9UK80
            Ensembl:ENST00000289865 Ensembl:ENST00000368001
            Ensembl:ENST00000368002 GeneID:27005 KEGG:hsa:27005 UCSC:uc010pkc.2
            GeneCards:GC01P161129 HGNC:HGNC:12620 HPA:HPA028397 MIM:604729
            neXtProt:NX_Q9UK80 PharmGKB:PA37246 OMA:NVQPRVG BRENDA:3.1.2.15
            EvolutionaryTrace:Q9UK80 GenomeRNAi:27005 NextBio:49506
            PMAP-CutDB:Q9UK80 Bgee:Q9UK80 CleanEx:HS_USP21
            Genevestigator:Q9UK80 GermOnline:ENSG00000143258 Uniprot:Q9UK80
        Length = 565

 Score = 234 (87.4 bits), Expect = 9.2e-17, Sum P(2) = 9.2e-17
 Identities = 69/204 (33%), Positives = 101/204 (49%)

Query:    76 EETTLIGLTFGGYLRSKIKCLKCLGKSELYERMMDLTVEID--GDIG---TLEEALAQFT 130
             E++ ++ L F G L+S +KC  C  +S  +E   DL++ I   G  G   +L +    FT
Sbjct:   366 EDSKIVDL-FVGQLKSCLKCQACGYRSTTFEVFCDLSLPIPKKGFAGGKVSLRDCFNLFT 424

Query:   131 ASEILVGENKYYCSRCKSYEKAKKKLTVLEEPNILTIVLKRFES--GNFGKLNKSVWFP- 187
               E L  EN   C RC+   ++ KKLTV   P IL + L RF +  G+  K +  V FP 
Sbjct:   425 KEEELESENAPVCDRCRQKTRSTKKLTVQRFPRILVLHLNRFSASRGSIKKSSVGVDFPL 484

Query:   188 EVLNMAPYMSRTGDGSPMYSLYAVVVHLDVTNATFSGHYVCYVKNSHEEWFRIDDSTVIP 247
             + L++  + S    GSP+Y LYA+  H   + +   GHY    +     W   +DS V P
Sbjct:   485 QRLSLGDFASDKA-GSPVYQLYALCNH---SGSVHYGHYTALCR-CQTGWHVYNDSRVSP 539

Query:   248 VKLERVLSEEAYMLLYARHSPRPP 271
             V   +V S E Y+L Y +    PP
Sbjct:   540 VSENQVASSEGYVLFY-QLMQEPP 562

 Score = 43 (20.2 bits), Expect = 9.2e-17, Sum P(2) = 9.2e-17
 Identities = 12/42 (28%), Positives = 22/42 (52%)

Query:    20 DGSYPVSPIGILSKIQK-IGSHLGHGREEDAHEFLRCAVDTM 60
             D    V+P    +  QK + S  G+  ++DA EFL+  ++ +
Sbjct:   273 DSCEAVNPTRFRAVFQKYVPSFSGYS-QQDAQEFLKLLMERL 313


>RGD|1588822 [details] [associations]
            symbol:Usp21 "ubiquitin specific peptidase 21" species:10116
            "Rattus norvegicus" [GO:0003713 "transcription coactivator
            activity" evidence=ISO;ISS] [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=ISO;ISS] [GO:0004843 "ubiquitin-specific
            protease activity" evidence=ISO;ISS] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA]
            [GO:0008234 "cysteine-type peptidase activity" evidence=ISO;ISS]
            [GO:0016578 "histone deubiquitination" evidence=ISO;ISS]
            [GO:0019784 "NEDD8-specific protease activity" evidence=ISO;ISS]
            [GO:0045893 "positive regulation of transcription, DNA-dependent"
            evidence=ISO;ISS] [GO:0046872 "metal ion binding" evidence=IEA]
            InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 RGD:1588822 GO:GO:0005634
            GO:GO:0005737 GO:GO:0045893 GO:GO:0046872 GO:GO:0006351
            GO:GO:0003713 GO:GO:0006511 GO:GO:0016578 GO:GO:0004843
            GO:GO:0004221 GO:GO:0019784 eggNOG:COG5533 CTD:27005
            HOVERGEN:HBG011164 KO:K11833 OrthoDB:EOG4229JD EMBL:BC166443
            IPI:IPI00896130 RefSeq:NP_001121110.1 UniGene:Rn.136743
            ProteinModelPortal:B2GUX4 PRIDE:B2GUX4 GeneID:688466
            KEGG:rno:688466 UCSC:RGD:1588822 NextBio:736555 ArrayExpress:B2GUX4
            Genevestigator:B2GUX4 Uniprot:B2GUX4
        Length = 565

 Score = 234 (87.4 bits), Expect = 9.2e-17, Sum P(2) = 9.2e-17
 Identities = 69/204 (33%), Positives = 102/204 (50%)

Query:    76 EETTLIGLTFGGYLRSKIKCLKCLGKSELYERMMDLTVEID--GDIG---TLEEALAQFT 130
             E++ ++ L F G L+S +KC  C  +S  +E   DL++ I   G  G   +L +  + FT
Sbjct:   366 EDSKIVDL-FVGQLKSCLKCQACGYRSTTFEVFCDLSLPIPKKGFAGGKVSLRDCFSLFT 424

Query:   131 ASEILVGENKYYCSRCKSYEKAKKKLTVLEEPNILTIVLKRFES--GNFGKLNKSVWFP- 187
               E L  EN   C RC+   ++ KKLTV   P IL + L RF +  G+  K +  V FP 
Sbjct:   425 KEEELESENAPVCDRCRQKTRSTKKLTVQRFPRILVLHLNRFSTSRGSIKKSSVGVDFPL 484

Query:   188 EVLNMAPYMSRTGDGSPMYSLYAVVVHLDVTNATFSGHYVCYVKNSHEEWFRIDDSTVIP 247
             + L++  + S    GSP+Y LYA+  H   + +   GHY    +     W   +DS V P
Sbjct:   485 QRLSLGDFASDKV-GSPVYQLYALCNH---SGSVHYGHYTALCR-CQTGWHVYNDSRVSP 539

Query:   248 VKLERVLSEEAYMLLYARHSPRPP 271
             V   +V S E Y+L Y +    PP
Sbjct:   540 VSENQVASSEGYVLFY-QLMQEPP 562

 Score = 43 (20.2 bits), Expect = 9.2e-17, Sum P(2) = 9.2e-17
 Identities = 12/42 (28%), Positives = 22/42 (52%)

Query:    20 DGSYPVSPIGILSKIQK-IGSHLGHGREEDAHEFLRCAVDTM 60
             D    V+P    +  QK + S  G+  ++DA EFL+  ++ +
Sbjct:   273 DSCEAVNPTRFRAVFQKYVPSFSGYS-QQDAQEFLKLLMERL 313


>UNIPROTKB|D4AVC8 [details] [associations]
            symbol:ARB_00141 "Ubiquitin C-terminal hydrolase CreB"
            species:663331 "Arthroderma benhamiae CBS 112371" [GO:0004221
            "ubiquitin thiolesterase activity" evidence=ISS] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=ISS]
            [GO:0045013 "carbon catabolite repression of transcription"
            evidence=ISS] InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443
            PROSITE:PS00973 PROSITE:PS50235 GO:GO:0006511 GO:GO:0004221
            KO:K11872 GO:GO:0045013 EMBL:ABSU01000012 RefSeq:XP_003013690.1
            GeneID:9520135 KEGG:abe:ARB_00141 Uniprot:D4AVC8
        Length = 1147

 Score = 248 (92.4 bits), Expect = 1.0e-16, Sum P(2) = 1.0e-16
 Identities = 64/208 (30%), Positives = 95/208 (45%)

Query:    46 EEDAHEFLRCAVDTMQSVCLK-EFGAKGKIAEETTLIGLTFGGYLRSKIKCLKCLGKSEL 104
             E DA      A  T  +  L    G   K    T  +   F G L S+ +CL C  KS+ 
Sbjct:   515 EADADSESSTATSTSVATTLATSVGGSAKSPYSTRWVHELFEGKLTSETECLTCEKKSQR 574

Query:   105 YERMMDLTVEIDGDIGTLEEALAQFTASEILVGENKYYCSRCKSYEKAKKKLTVLEEPNI 164
              E  +DL+V+++    ++   L +F+  E+L   NK++C  C   ++A+K++ +   P I
Sbjct:   575 DEAFLDLSVDLEQH-SSVTSCLRKFSQEEMLCERNKFHCDNCGGLQEAEKRMKIKRLPRI 633

Query:   165 LTIVLKRF----ESGNFGKLNKSVWFPEVLNMAPYMSRTGDGSPMYSLYAVVVHLDVTNA 220
             L + LKRF    +     KL   V +P  L +        D   +Y LYAVVVH+     
Sbjct:   634 LALHLKRFKYTEDQQRLQKLFHRVVYPYYLRLFNTTDDAEDPDRLYELYAVVVHIG--GG 691

Query:   221 TFSGHYVCYVKNSHEEWFRIDDSTVIPV 248
              + GHYV  +K     W   DD  V PV
Sbjct:   692 PYHGHYVAIIKTEDRGWLLFDDEMVEPV 719

 Score = 37 (18.1 bits), Expect = 1.0e-16, Sum P(2) = 1.0e-16
 Identities = 9/29 (31%), Positives = 13/29 (44%)

Query:    25 VSPIGILSKIQKIGSHLGHGREEDAHEFL 53
             V P   L  +++          +DAHEFL
Sbjct:   465 VRPQHFLDVLRRENEMFRTAMHQDAHEFL 493


>UNIPROTKB|D4A4F6 [details] [associations]
            symbol:D4A4F6 "Ubiquitin carboxyl-terminal hydrolase"
            species:10116 "Rattus norvegicus" [GO:0000278 "mitotic cell cycle"
            evidence=IEA] [GO:0000790 "nuclear chromatin" evidence=IEA]
            [GO:0004221 "ubiquitin thiolesterase activity" evidence=IEA]
            [GO:0006281 "DNA repair" evidence=IEA] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA]
            [GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
            [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016578 "histone
            deubiquitination" evidence=IEA] [GO:0031647 "regulation of protein
            stability" evidence=IEA] [GO:0042393 "histone binding"
            evidence=IEA] InterPro:IPR001394 InterPro:IPR001607
            InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271 GO:GO:0046872
            GO:GO:0008270 GO:GO:0008234 Gene3D:3.30.40.10 InterPro:IPR013083
            GO:GO:0006511 GO:GO:0004221 GeneTree:ENSGT00690000102047
            IPI:IPI00366664 Ensembl:ENSRNOT00000057739 ArrayExpress:D4A4F6
            Uniprot:D4A4F6
        Length = 483

 Score = 233 (87.1 bits), Expect = 1.0e-16, P = 1.0e-16
 Identities = 69/215 (32%), Positives = 104/215 (48%)

Query:    78 TTLIGLTFGGYLRSKIKCLKCLGKSELYERMMDLTVEI-------------DGDIGTLEE 124
             +T++   FGG L++++ CL C  +S  ++  +DL+++I             +G + +L +
Sbjct:   270 STVVTTIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRSKRSKNQENGPVCSLRD 329

Query:   125 ALAQFTASEILVGENKYYCSRCKSYEKAKKKLTVLEEPNILTIVLKRFESGNF--GKLNK 182
              L  FT  E L     Y C +CK  +K+ KK  + + P  L + LKRF    +   K++ 
Sbjct:   330 CLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKALCLHLKRFHWTAYLRNKVDT 389

Query:   183 SVWFP-EVLNMAPYM---SRTGDGSPMYSLYAVVVHLDVTNATFSGHYVCYVKNSHE-EW 237
              V FP   L+M  Y+     +G  S +Y L AVVVH    +   SGHY  Y    HE  W
Sbjct:   390 YVQFPLRGLDMKCYLLEPENSGPDSCLYDLAAVVVHHG--SGVGSGHYTAYAV--HEGRW 445

Query:   238 FRIDDSTVIPVKLERVLSEEAYMLLYARHSPRPPA 272
             F  +DSTV     E V   +AY+L Y     R  A
Sbjct:   446 FHFNDSTVTVTDEETVGKAKAYILFYVERQARAGA 480


>UNIPROTKB|F1PD56 [details] [associations]
            symbol:USP20 "Ubiquitin carboxyl-terminal hydrolase"
            species:9615 "Canis lupus familiaris" [GO:0071108 "protein
            K48-linked deubiquitination" evidence=IEA] [GO:0070536 "protein
            K63-linked deubiquitination" evidence=IEA] [GO:0008277 "regulation
            of G-protein coupled receptor protein signaling pathway"
            evidence=IEA] [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=IEA] [GO:0004197 "cysteine-type endopeptidase activity"
            evidence=IEA] [GO:0001664 "G-protein coupled receptor binding"
            evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
            [GO:0006511 "ubiquitin-dependent protein catabolic process"
            evidence=IEA] InterPro:IPR001394 InterPro:IPR001607
            InterPro:IPR006615 InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148
            Pfam:PF06337 PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235
            PROSITE:PS50271 PROSITE:PS51283 SMART:SM00695 GO:GO:0046872
            GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511
            GO:GO:0008277 GO:GO:0071108 GO:GO:0070536 GO:GO:0004197
            GO:GO:0004221 CTD:10868 GeneTree:ENSGT00690000101718 KO:K11848
            OMA:ADYGQIS EMBL:AAEX03006844 RefSeq:XP_537816.3
            Ensembl:ENSCAFT00000031793 GeneID:480696 KEGG:cfa:480696
            Uniprot:F1PD56
        Length = 915

 Score = 216 (81.1 bits), Expect = 1.1e-16, Sum P(3) = 1.1e-16
 Identities = 57/157 (36%), Positives = 80/157 (50%)

Query:   117 GDIGTLEEALAQFTASEILVGENKYYCSRCKSYEKAKKKLTVLEEPNILTIVLKRFESG- 175
             G + TLE+ LA F  ++ L G+N Y C RCK      K   VL  P IL I LKRF    
Sbjct:   535 GPVVTLEDCLAAFFVADELKGDNMYSCERCKKLRNGVKYCKVLRLPEILYIHLKRFRHEV 594

Query:   176 --NFGKLNKSVWFP-EVLNMAPYMSRTGDGS-PMYSLYAVVVHLDVTNATFSGHYVCYVK 231
               +F K++  V FP E L++ P++++        Y L +V+ H        SGHY+ Y +
Sbjct:   595 MYSF-KISSHVSFPLEGLDLRPFLAKECTSQITTYDLLSVICHHGTAG---SGHYIAYCQ 650

Query:   232 NS-HEEWFRIDDSTVIPVKLERVLSEEAYMLLYARHS 267
             N  + +W+  DD  V  V    V S EAY+L Y + S
Sbjct:   651 NVINGQWYEFDDQYVTEVHETVVQSAEAYVLFYRKSS 687

 Score = 63 (27.2 bits), Expect = 1.1e-16, Sum P(3) = 1.1e-16
 Identities = 17/52 (32%), Positives = 26/52 (50%)

Query:    79 TLIGLTFGGYLRSKIKCLKCLGKSELYERMMDLTVEIDG--DIGTLEEALAQ 128
             ++I   F G + S ++CL C   S   E   DL++ I G  D+  L  A+ Q
Sbjct:   444 SVISDIFDGSILSLVQCLTCDRVSTTVETFQDLSLPIPGKEDLARLHSAIYQ 495

 Score = 47 (21.6 bits), Expect = 1.1e-16, Sum P(3) = 1.1e-16
 Identities = 16/66 (24%), Positives = 29/66 (43%)

Query:     2 PGLHSTFDVVSCLILNAKDGSYPVSPIGILSKIQKIGSHLGHGREEDAHEFLRCAVDTMQ 61
             P L  ++  +   + + +  SY V P  +   I+ +        ++D  EFL C +D + 
Sbjct:   186 PALCKSYQKLVSEVWHRRRPSYVV-PTSLSHGIKLVNPMFRGYAQQDTQEFLCCLMDQLH 244

Query:    62 SVCLKE 67
                LKE
Sbjct:   245 EE-LKE 249


>UNIPROTKB|Q8TEY7 [details] [associations]
            symbol:USP33 "Ubiquitin carboxyl-terminal hydrolase 33"
            species:9606 "Homo sapiens" [GO:0006897 "endocytosis" evidence=IEA]
            [GO:0044297 "cell body" evidence=IEA] [GO:0048471 "perinuclear
            region of cytoplasm" evidence=IEA] [GO:0030891 "VCB complex"
            evidence=TAS] [GO:0005737 "cytoplasm" evidence=TAS] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=TAS]
            [GO:0005515 "protein binding" evidence=IPI] [GO:0016579 "protein
            deubiquitination" evidence=IDA] [GO:0004843 "ubiquitin-specific
            protease activity" evidence=TAS] [GO:0043130 "ubiquitin binding"
            evidence=IDA] [GO:0008277 "regulation of G-protein coupled receptor
            protein signaling pathway" evidence=IMP] [GO:0070536 "protein
            K63-linked deubiquitination" evidence=IDA] [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IDA] [GO:0004197 "cysteine-type
            endopeptidase activity" evidence=IMP] [GO:0008270 "zinc ion
            binding" evidence=IDA] [GO:0001664 "G-protein coupled receptor
            binding" evidence=IPI] [GO:0071108 "protein K48-linked
            deubiquitination" evidence=IDA] [GO:0016477 "cell migration"
            evidence=ISS] [GO:0007411 "axon guidance" evidence=ISS]
            InterPro:IPR001394 InterPro:IPR001607 InterPro:IPR006615
            InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 Pfam:PF06337
            PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271
            PROSITE:PS51283 SMART:SM00695 EMBL:AF383172 GO:GO:0048471
            GO:GO:0007411 GO:GO:0016477 GO:GO:0046872 GO:GO:0008270
            GO:GO:0006897 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511
            GO:GO:0008277 GO:GO:0071108 GO:GO:0070536 GO:GO:0004197
            GO:GO:0044297 GO:GO:0004843 GO:GO:0004221 GO:GO:0030891
            eggNOG:COG5560 HOGENOM:HOG000286031 HOVERGEN:HBG054196 KO:K11848
            MEROPS:C19.037 CTD:23032 OMA:TMEEDKS EMBL:AF383173 EMBL:AB029020
            EMBL:AK022864 EMBL:BC016663 IPI:IPI00236901 IPI:IPI00377264
            IPI:IPI00402757 RefSeq:NP_055832.3 RefSeq:NP_963918.1
            RefSeq:NP_963920.1 UniGene:Hs.480597 PDB:2UZG PDBsum:2UZG
            ProteinModelPortal:Q8TEY7 SMR:Q8TEY7 DIP:DIP-48942N IntAct:Q8TEY7
            MINT:MINT-1370210 STRING:Q8TEY7 PhosphoSite:Q8TEY7 DMDM:116242838
            PaxDb:Q8TEY7 PRIDE:Q8TEY7 DNASU:23032 Ensembl:ENST00000357428
            Ensembl:ENST00000370792 Ensembl:ENST00000370793
            Ensembl:ENST00000370794 GeneID:23032 KEGG:hsa:23032 UCSC:uc001dhs.3
            UCSC:uc001dhw.3 GeneCards:GC01M078161 H-InvDB:HIX0159957
            HGNC:HGNC:20059 HPA:HPA005719 neXtProt:NX_Q8TEY7
            PharmGKB:PA134955343 InParanoid:Q8TEY7 PhylomeDB:Q8TEY7
            ChiTaRS:USP33 EvolutionaryTrace:Q8TEY7 GenomeRNAi:23032
            NextBio:44018 ArrayExpress:Q8TEY7 Bgee:Q8TEY7 CleanEx:HS_USP33
            Genevestigator:Q8TEY7 GermOnline:ENSG00000077254 Uniprot:Q8TEY7
        Length = 942

 Score = 215 (80.7 bits), Expect = 1.2e-16, Sum P(3) = 1.2e-16
 Identities = 54/156 (34%), Positives = 81/156 (51%)

Query:   117 GDIGTLEEALAQFTASEILVGENKYYCSRCKSYEKAKKKLTVLEEPNILTIVLKRFESG- 175
             G + TL++ LA F A + L G+N Y C +CK      K   V   P IL I LKRF    
Sbjct:   564 GPVVTLQDCLAAFFARDELKGDNMYSCEKCKKLRNGVKFCKVQNFPEILCIHLKRFRHEL 623

Query:   176 NFG-KLNKSVWFP-EVLNMAPYMSRTGDGSPM-YSLYAVVVHLDVTNATFSGHYVCYVKN 232
              F  K++  V FP E L++ P++++      + Y L +V+ H    +   SGHY+ Y +N
Sbjct:   624 MFSTKISTHVSFPLEGLDLQPFLAKDSPAQIVTYDLLSVICHHGTAS---SGHYIAYCRN 680

Query:   233 S-HEEWFRIDDSTVIPVKLERVLSEEAYMLLYARHS 267
             + +  W+  DD +V  V    V + EAY+L Y + S
Sbjct:   681 NLNNLWYEFDDQSVTEVSESTVQNAEAYVLFYRKSS 716

 Score = 56 (24.8 bits), Expect = 1.2e-16, Sum P(3) = 1.2e-16
 Identities = 16/50 (32%), Positives = 25/50 (50%)

Query:    18 AKDGSYPVSPIGILSKIQKIGSHLGHGREEDAHEFLRCAVDTMQSVCLKE 67
             ++ GS  V P  +   I+ +        ++DA EFLRC +D +    LKE
Sbjct:   243 SRPGS--VVPTTLFQGIKTVNPTFRGYSQQDAQEFLRCLMDLLHEE-LKE 289

 Score = 55 (24.4 bits), Expect = 1.2e-16, Sum P(3) = 1.2e-16
 Identities = 15/49 (30%), Positives = 24/49 (48%)

Query:    79 TLIGLTFGGYLRSKIKCLKCLGKSELYERMMDLTVEIDG--DIGTLEEA 125
             ++I   F G + S ++CL C   S   E   DL++ I G  D+  L  +
Sbjct:   473 SVISDIFDGTIISSVQCLTCDRVSVTLETFQDLSLPIPGKEDLAKLHSS 521


>UNIPROTKB|D4A4F5 [details] [associations]
            symbol:D4A4F5 "Ubiquitin carboxyl-terminal hydrolase"
            species:10116 "Rattus norvegicus" [GO:0000278 "mitotic cell cycle"
            evidence=IEA] [GO:0000790 "nuclear chromatin" evidence=IEA]
            [GO:0004221 "ubiquitin thiolesterase activity" evidence=IEA]
            [GO:0006281 "DNA repair" evidence=IEA] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA]
            [GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
            [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016578 "histone
            deubiquitination" evidence=IEA] [GO:0031647 "regulation of protein
            stability" evidence=IEA] [GO:0042393 "histone binding"
            evidence=IEA] InterPro:IPR001394 InterPro:IPR001607
            InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271 GO:GO:0046872
            GO:GO:0008270 GO:GO:0006281 GO:GO:0008234 GO:GO:0031647
            GO:GO:0000790 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511
            GO:GO:0016578 GO:GO:0004221 GO:GO:0000278 OMA:DCLRSFT
            OrthoDB:EOG4G4GQC IPI:IPI00776807 Ensembl:ENSRNOT00000057742
            ArrayExpress:D4A4F5 Uniprot:D4A4F5
        Length = 521

 Score = 233 (87.1 bits), Expect = 1.3e-16, P = 1.3e-16
 Identities = 69/215 (32%), Positives = 104/215 (48%)

Query:    78 TTLIGLTFGGYLRSKIKCLKCLGKSELYERMMDLTVEI-------------DGDIGTLEE 124
             +T++   FGG L++++ CL C  +S  ++  +DL+++I             +G + +L +
Sbjct:   308 STVVTTIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRSKRSKNQENGPVCSLRD 367

Query:   125 ALAQFTASEILVGENKYYCSRCKSYEKAKKKLTVLEEPNILTIVLKRFESGNF--GKLNK 182
              L  FT  E L     Y C +CK  +K+ KK  + + P  L + LKRF    +   K++ 
Sbjct:   368 CLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKALCLHLKRFHWTAYLRNKVDT 427

Query:   183 SVWFP-EVLNMAPYM---SRTGDGSPMYSLYAVVVHLDVTNATFSGHYVCYVKNSHE-EW 237
              V FP   L+M  Y+     +G  S +Y L AVVVH    +   SGHY  Y    HE  W
Sbjct:   428 YVQFPLRGLDMKCYLLEPENSGPDSCLYDLAAVVVHHG--SGVGSGHYTAYAV--HEGRW 483

Query:   238 FRIDDSTVIPVKLERVLSEEAYMLLYARHSPRPPA 272
             F  +DSTV     E V   +AY+L Y     R  A
Sbjct:   484 FHFNDSTVTVTDEETVGKAKAYILFYVERQARAGA 518


>ASPGD|ASPL0000012423 [details] [associations]
            symbol:creB species:162425 "Emericella nidulans"
            [GO:0004843 "ubiquitin-specific protease activity"
            evidence=ISM;ISS;IDA] [GO:0045013 "carbon catabolite repression of
            transcription" evidence=IMP] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0051286 "cell tip" evidence=IEA] [GO:0005829 "cytosol"
            evidence=IEA] [GO:0032153 "cell division site" evidence=IEA]
            [GO:0006897 "endocytosis" evidence=IEA] [GO:0016579 "protein
            deubiquitination" evidence=IEA] [GO:0034613 "cellular protein
            localization" evidence=IEA] [GO:0006511 "ubiquitin-dependent
            protein catabolic process" evidence=IEA] [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 GO:GO:0008234 EMBL:BN001302 EMBL:AACD01000061
            GO:GO:0006511 GO:GO:0004221 eggNOG:COG5533 HOGENOM:HOG000192482
            KO:K11872 OrthoDB:EOG43XZCS GO:GO:0045013 EMBL:AF327414
            RefSeq:XP_661191.1 HSSP:Q93009 ProteinModelPortal:Q96V54
            STRING:Q96V54 EnsemblFungi:CADANIAT00005157 GeneID:2873003
            KEGG:ani:AN3587.2 OMA:DEMVEPV Uniprot:Q96V54
        Length = 766

 Score = 235 (87.8 bits), Expect = 1.7e-16, P = 1.7e-16
 Identities = 60/197 (30%), Positives = 96/197 (48%)

Query:    56 AVDTMQSVCLKEFGAKGKIAEETTLIGLTFGGYLRSKIKCLKCLGKSELYERMMDLTVEI 115
             A D   SV +    +  +    T  +   F G L S+ +CL C   S+  E  +DL+V++
Sbjct:   248 ASDVSDSV-IPSSSSGSRTPNTTRWVHELFEGLLTSETQCLTCEKASQRDEVFLDLSVDL 306

Query:   116 DGDIGTLEEALAQFTASEILVGENKYYCSRCKSYEKAKKKLTVLEEPNILTIVLKRFE-S 174
             +    ++   L +F+A E+L   NK++C  C   ++A+K++ +   P IL + LKRF+ +
Sbjct:   307 EQH-SSVTSCLRKFSAEEMLCERNKFHCDNCGGLQEAEKRMKIKRLPRILALHLKRFKYT 365

Query:   175 GNFGKLNK---SVWFPEVLNMAPYMSRTGDGSPMYSLYAVVVHLDVTNATFSGHYVCYVK 231
              +  +L K    V +P  L +        D   +Y LYAVVVH+      + GHYV  +K
Sbjct:   366 EDLQRLQKLFHRVVYPYHLRLFNTTDDAEDPDRLYELYAVVVHIG--GGPYHGHYVSIIK 423

Query:   232 NSHEEWFRIDDSTVIPV 248
                  W   DD  V PV
Sbjct:   424 TQDRGWLLFDDEMVEPV 440


>UNIPROTKB|Q96V54 [details] [associations]
            symbol:creB "Ubiquitin carboxyl-terminal hydrolase creB"
            species:227321 "Aspergillus nidulans FGSC A4" [GO:0004221
            "ubiquitin thiolesterase activity" evidence=IDA] [GO:0005515
            "protein binding" evidence=IPI] [GO:0006511 "ubiquitin-dependent
            protein catabolic process" evidence=IDA] [GO:0045013 "carbon
            catabolite repression of transcription" evidence=IMP]
            InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 GO:GO:0008234 EMBL:BN001302
            EMBL:AACD01000061 GO:GO:0006511 GO:GO:0004221 eggNOG:COG5533
            HOGENOM:HOG000192482 KO:K11872 OrthoDB:EOG43XZCS GO:GO:0045013
            EMBL:AF327414 RefSeq:XP_661191.1 HSSP:Q93009
            ProteinModelPortal:Q96V54 STRING:Q96V54
            EnsemblFungi:CADANIAT00005157 GeneID:2873003 KEGG:ani:AN3587.2
            OMA:DEMVEPV Uniprot:Q96V54
        Length = 766

 Score = 235 (87.8 bits), Expect = 1.7e-16, P = 1.7e-16
 Identities = 60/197 (30%), Positives = 96/197 (48%)

Query:    56 AVDTMQSVCLKEFGAKGKIAEETTLIGLTFGGYLRSKIKCLKCLGKSELYERMMDLTVEI 115
             A D   SV +    +  +    T  +   F G L S+ +CL C   S+  E  +DL+V++
Sbjct:   248 ASDVSDSV-IPSSSSGSRTPNTTRWVHELFEGLLTSETQCLTCEKASQRDEVFLDLSVDL 306

Query:   116 DGDIGTLEEALAQFTASEILVGENKYYCSRCKSYEKAKKKLTVLEEPNILTIVLKRFE-S 174
             +    ++   L +F+A E+L   NK++C  C   ++A+K++ +   P IL + LKRF+ +
Sbjct:   307 EQH-SSVTSCLRKFSAEEMLCERNKFHCDNCGGLQEAEKRMKIKRLPRILALHLKRFKYT 365

Query:   175 GNFGKLNK---SVWFPEVLNMAPYMSRTGDGSPMYSLYAVVVHLDVTNATFSGHYVCYVK 231
              +  +L K    V +P  L +        D   +Y LYAVVVH+      + GHYV  +K
Sbjct:   366 EDLQRLQKLFHRVVYPYHLRLFNTTDDAEDPDRLYELYAVVVHIG--GGPYHGHYVSIIK 423

Query:   232 NSHEEWFRIDDSTVIPV 248
                  W   DD  V PV
Sbjct:   424 TQDRGWLLFDDEMVEPV 440


>UNIPROTKB|A6QNM7 [details] [associations]
            symbol:USP33 "Ubiquitin carboxyl-terminal hydrolase 33"
            species:9913 "Bos taurus" [GO:0016477 "cell migration"
            evidence=ISS] [GO:0008270 "zinc ion binding" evidence=ISS]
            [GO:0004197 "cysteine-type endopeptidase activity" evidence=ISS]
            [GO:0008277 "regulation of G-protein coupled receptor protein
            signaling pathway" evidence=ISS] [GO:0016579 "protein
            deubiquitination" evidence=ISS] [GO:0071108 "protein K48-linked
            deubiquitination" evidence=ISS] [GO:0007411 "axon guidance"
            evidence=ISS] [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=ISS] [GO:0070536 "protein K63-linked deubiquitination"
            evidence=ISS] [GO:0048471 "perinuclear region of cytoplasm"
            evidence=IEA] [GO:0044297 "cell body" evidence=IEA] [GO:0001664
            "G-protein coupled receptor binding" evidence=IEA] [GO:0006897
            "endocytosis" evidence=IEA] [GO:0006511 "ubiquitin-dependent
            protein catabolic process" evidence=IEA] InterPro:IPR001394
            InterPro:IPR001607 InterPro:IPR006615 InterPro:IPR018200
            Pfam:PF00443 Pfam:PF02148 Pfam:PF06337 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271 PROSITE:PS51283
            SMART:SM00695 GO:GO:0048471 GO:GO:0007411 GO:GO:0016477
            GO:GO:0046872 GO:GO:0008270 GO:GO:0006897 Gene3D:3.30.40.10
            InterPro:IPR013083 GO:GO:0006511 GO:GO:0008277 GO:GO:0071108
            GO:GO:0070536 GO:GO:0004197 GO:GO:0044297 GO:GO:0004221
            eggNOG:COG5560 GeneTree:ENSGT00690000101718 HOGENOM:HOG000286031
            HOVERGEN:HBG054196 KO:K11848 EMBL:BC148905 IPI:IPI00708909
            RefSeq:NP_001094609.1 UniGene:Bt.46098 ProteinModelPortal:A6QNM7
            SMR:A6QNM7 STRING:A6QNM7 MEROPS:C19.037 Ensembl:ENSBTAT00000027667
            GeneID:531706 KEGG:bta:531706 CTD:23032 InParanoid:A6QNM7
            OMA:TMEEDKS OrthoDB:EOG4B8JC9 NextBio:20875513 Uniprot:A6QNM7
        Length = 912

 Score = 213 (80.0 bits), Expect = 1.8e-16, Sum P(3) = 1.8e-16
 Identities = 54/156 (34%), Positives = 82/156 (52%)

Query:   117 GDIGTLEEALAQFTASEILVGENKYYCSRCKSYEKAKKKLTVLEEPNILTIVLKRFESG- 175
             G + TL++ LA F A + L G+N Y C +CK      K   V + P IL I LKRF    
Sbjct:   534 GPVVTLQDCLAAFFARDELKGDNMYSCEKCKKLRNGVKFCKVQKFPEILCIHLKRFRHEL 593

Query:   176 NFG-KLNKSVWFP-EVLNMAPYMSRTGDGSPM-YSLYAVVVHLDVTNATFSGHYVCYVKN 232
              F  K++  V FP E L++ P++++      + Y L +V+ H    +   SGHY+ Y +N
Sbjct:   594 MFSTKISTHVSFPLEGLDLQPFLAKDSPVQIVTYDLLSVICHHGTAS---SGHYIAYCRN 650

Query:   233 S-HEEWFRIDDSTVIPVKLERVLSEEAYMLLYARHS 267
             + +  W+  DD +V  V    V + EAY+L Y + S
Sbjct:   651 NLNNLWYEFDDQSVTEVSESTVQNAEAYVLFYRKSS 686

 Score = 56 (24.8 bits), Expect = 1.8e-16, Sum P(3) = 1.8e-16
 Identities = 16/50 (32%), Positives = 25/50 (50%)

Query:    18 AKDGSYPVSPIGILSKIQKIGSHLGHGREEDAHEFLRCAVDTMQSVCLKE 67
             ++ GS  V P  +   I+ +        ++DA EFLRC +D +    LKE
Sbjct:   212 SRPGS--VVPTTLFQGIKTVNPTFRGYSQQDAQEFLRCLMDLLHEE-LKE 258

 Score = 55 (24.4 bits), Expect = 1.8e-16, Sum P(3) = 1.8e-16
 Identities = 15/49 (30%), Positives = 24/49 (48%)

Query:    79 TLIGLTFGGYLRSKIKCLKCLGKSELYERMMDLTVEIDG--DIGTLEEA 125
             ++I   F G + S ++CL C   S   E   DL++ I G  D+  L  +
Sbjct:   443 SVISDIFDGTIISSVQCLTCDRVSVTLETFQDLSLPIPGKEDLAKLHSS 491


>SGD|S000005130 [details] [associations]
            symbol:UBP10 "Ubiquitin-specific protease, deubiquitinates
            Ub-protein moieties" species:4932 "Saccharomyces cerevisiae"
            [GO:0004221 "ubiquitin thiolesterase activity" evidence=IEA]
            [GO:0000781 "chromosome, telomeric region" evidence=IEA]
            [GO:0008233 "peptidase activity" evidence=IEA] [GO:0004843
            "ubiquitin-specific protease activity" evidence=IDA] [GO:0005634
            "nucleus" evidence=IDA] [GO:0006348 "chromatin silencing at
            telomere" evidence=IMP] [GO:0016579 "protein deubiquitination"
            evidence=IMP;IDA;TAS] [GO:0016787 "hydrolase activity"
            evidence=IEA] [GO:0008234 "cysteine-type peptidase activity"
            evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
            process" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
            [GO:0005694 "chromosome" evidence=IEA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 SGD:S000005130 GO:GO:0005634 EMBL:BK006947
            GO:GO:0006348 GO:GO:0006511 GO:GO:0000781 GO:GO:0004843
            GO:GO:0016579 GO:GO:0004221 eggNOG:COG5533 EMBL:Z71462 PIR:S63141
            RefSeq:NP_014213.2 ProteinModelPortal:P53874 SMR:P53874
            DIP:DIP-6664N IntAct:P53874 MINT:MINT-643556 STRING:P53874
            MEROPS:C19.088 PaxDb:P53874 PeptideAtlas:P53874
            EnsemblFungi:YNL186W GeneID:855535 KEGG:sce:YNL186W CYGD:YNL186w
            GeneTree:ENSGT00600000085270 HOGENOM:HOG000248158 KO:K11873
            OMA:YVCEKCH OrthoDB:EOG4JHGQN NextBio:979592 Genevestigator:P53874
            GermOnline:YNL186W Uniprot:P53874
        Length = 792

 Score = 194 (73.4 bits), Expect = 1.9e-16, Sum P(2) = 1.9e-16
 Identities = 58/193 (30%), Positives = 94/193 (48%)

Query:   121 TLEEALAQFTASEILV--GENK-YYCSRCKSYEKAKKKLTVLEEPNILTIVLK--RFESG 175
             ++E+++  F   E++    E K Y C +C     A K  ++L  P  L + LK  RF   
Sbjct:   585 SIEKSIKDFFNPELIKVDKEQKGYVCEKCHKTTNAVKHSSILRAPETLLVHLKKFRFNGT 644

Query:   176 NFGKLNKSVWFPEVLNMAPYMSRTGDGSPMYSLYAVVVHLDVTNATFSGHYVCYVKNSHE 235
             +  K+ ++V +P  L++  Y   + +    Y L +VVVH     +  SGHY+ + K    
Sbjct:   645 SSSKMKQAVSYPMFLDLTEYCE-SKELPVKYQLLSVVVHEG--RSLSSGHYIAHCKQPDG 701

Query:   236 EWFRIDDSTVIPVKLERVLSE-EAYMLLYARHSPR--PPALIRNNVSHG-VKSKKKNLEA 291
              W   DD  +  +    VL E  AY LLY R +P+  P  L ++ ++ G V SK K  +A
Sbjct:   702 SWATYDDEYINIISERDVLKEPNAYYLLYTRLTPKSVPLPLAKSAMATGNVTSKSKQEQA 761

Query:   292 VDLNNTSKIRSNS 304
             V+  N   ++ NS
Sbjct:   762 VNEPNNRPLKINS 774

 Score = 89 (36.4 bits), Expect = 1.9e-16, Sum P(2) = 1.9e-16
 Identities = 23/96 (23%), Positives = 48/96 (50%)

Query:    22 SYPVSPIGILSKIQKIGSHLGHGREEDAHEFLRCAVDTMQSVCLKEFGAKGKIAEETTLI 81
             SY ++P  ++S++  I   +   ++ED+HE+    +  +Q    ++   KG    E+ + 
Sbjct:   433 SY-INPKHLISRLDDINCMMSEWQQEDSHEYFMSLMSRLQ----EDSVPKGHKLIESIIY 487

Query:    82 GLTFGGYLRSKIKCLKCLGKSELYERMMDLTVEIDG 117
              + FGG L+  + C  C   S+  +   DL++ + G
Sbjct:   488 DI-FGGLLKQIVTCKSCGSISKTEQPFYDLSLHLKG 522


>FB|FBgn0038862 [details] [associations]
            symbol:Ubpy "UBPY ortholog" species:7227 "Drosophila
            melanogaster" [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
            process" evidence=IEA] [GO:0090263 "positive regulation of
            canonical Wnt receptor signaling pathway" evidence=IMP] [GO:0008587
            "imaginal disc-derived wing margin morphogenesis" evidence=IMP]
            [GO:0005622 "intracellular" evidence=IDA] [GO:0045880 "positive
            regulation of smoothened signaling pathway" evidence=IGI]
            [GO:0016579 "protein deubiquitination" evidence=IMP] [GO:0004843
            "ubiquitin-specific protease activity" evidence=IDA]
            InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 Pfam:PF00581 GO:GO:0005622
            Gene3D:3.40.250.10 InterPro:IPR001763 SUPFAM:SSF52821
            PROSITE:PS50206 GO:GO:0006511 GO:GO:0090263 GO:GO:0004843
            GO:GO:0016579 GO:GO:0004221 GO:GO:0008587 GO:GO:0045880 HSSP:Q93009
            InterPro:IPR015063 Pfam:PF08969 EMBL:AY122247
            ProteinModelPortal:Q8MQX4 SMR:Q8MQX4 MEROPS:C19.A47 PRIDE:Q8MQX4
            UCSC:CG5798-RA FlyBase:FBgn0038862 InParanoid:Q8MQX4
            OrthoDB:EOG470RZ7 ArrayExpress:Q8MQX4 Bgee:Q8MQX4 Uniprot:Q8MQX4
        Length = 896

 Score = 234 (87.4 bits), Expect = 2.8e-16, P = 2.8e-16
 Identities = 73/244 (29%), Positives = 125/244 (51%)

Query:    46 EEDAHEFLRCAVD----TMQSVCL---KEF-GAKGKI------AEETTLIGLTFGGYLRS 91
             ++D+HEFL   +D     +Q++ +   +E   A  K       A+E+ ++ L F G ++S
Sbjct:   650 QQDSHEFLTILMDWLHSDLQTLHVPRQREMISASEKAWLEFTKAKESMILHL-FYGQMKS 708

Query:    92 KIKCLKCLGKSELYERMMDLTVEI--DGDIGTLEEALAQFTASEILVGENKYYCSRCKSY 149
              +KC+ C  +S  YE   +L++E+  + ++  L + +  + + E + G   + C  CK+ 
Sbjct:   709 TVKCVACHKESATYESFSNLSLELPPNSNVCQLNQCMDMYFSGERIHG---WKCPSCKTK 765

Query:   150 EKAKKKLTVLEEPNILTIVLKRF-----ESGNFGKLNKSVWFP-EVLNMAPYMSRTGDGS 203
               A KKL + + P +L + LKRF      SG++ K    + FP E L+M PY++R    +
Sbjct:   766 RDAIKKLDISKLPPVLVVHLKRFYADPSNSGSYMKKQNYLRFPLENLDMNPYIARAESRA 825

Query:   204 --PM-YSLYAVVVHLDVTNATFSGHYVCYVKNS-HEEWFRIDDSTVIPVKLERVLSEEAY 259
               P  Y LYAV  H         GHY  + K++ + +WF+ DD  V  +    V+S  AY
Sbjct:   826 VTPKTYQLYAVSNHYGTMEG---GHYTAFCKSANYGKWFKFDDQVVSALDSSNVVSSAAY 882

Query:   260 MLLY 263
             +L Y
Sbjct:   883 ILFY 886


>UNIPROTKB|H0YCV3 [details] [associations]
            symbol:USP33 "Ubiquitin carboxyl-terminal hydrolase 33"
            species:9606 "Homo sapiens" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] InterPro:IPR001394
            InterPro:IPR006615 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00973
            PROSITE:PS50235 PROSITE:PS51283 SMART:SM00695 GO:GO:0006511
            GO:GO:0004221 HGNC:HGNC:20059 ChiTaRS:USP33 EMBL:AC114487
            Ensembl:ENST00000481579 Uniprot:H0YCV3
        Length = 456

 Score = 215 (80.7 bits), Expect = 3.1e-16, Sum P(2) = 3.1e-16
 Identities = 54/156 (34%), Positives = 81/156 (51%)

Query:   117 GDIGTLEEALAQFTASEILVGENKYYCSRCKSYEKAKKKLTVLEEPNILTIVLKRFESG- 175
             G + TL++ LA F A + L G+N Y C +CK      K   V   P IL I LKRF    
Sbjct:   169 GPVVTLQDCLAAFFARDELKGDNMYSCEKCKKLRNGVKFCKVQNFPEILCIHLKRFRHEL 228

Query:   176 NFG-KLNKSVWFP-EVLNMAPYMSRTGDGSPM-YSLYAVVVHLDVTNATFSGHYVCYVKN 232
              F  K++  V FP E L++ P++++      + Y L +V+ H    +   SGHY+ Y +N
Sbjct:   229 MFSTKISTHVSFPLEGLDLQPFLAKDSPAQIVTYDLLSVICHHGTAS---SGHYIAYCRN 285

Query:   233 S-HEEWFRIDDSTVIPVKLERVLSEEAYMLLYARHS 267
             + +  W+  DD +V  V    V + EAY+L Y + S
Sbjct:   286 NLNNLWYEFDDQSVTEVSESTVQNAEAYVLFYRKSS 321

 Score = 55 (24.4 bits), Expect = 3.1e-16, Sum P(2) = 3.1e-16
 Identities = 15/49 (30%), Positives = 24/49 (48%)

Query:    79 TLIGLTFGGYLRSKIKCLKCLGKSELYERMMDLTVEIDG--DIGTLEEA 125
             ++I   F G + S ++CL C   S   E   DL++ I G  D+  L  +
Sbjct:    78 SVISDIFDGTIISSVQCLTCDRVSVTLETFQDLSLPIPGKEDLAKLHSS 126


>CGD|CAL0000903 [details] [associations]
            symbol:orf19.1767 species:5476 "Candida albicans" [GO:0000124
            "SAGA complex" evidence=IEA] [GO:0071819 "DUBm complex"
            evidence=IEA] [GO:0046695 "SLIK (SAGA-like) complex" evidence=IEA]
            [GO:0004843 "ubiquitin-specific protease activity" evidence=IEA]
            [GO:0032947 "protein complex scaffold" evidence=IEA] [GO:0016578
            "histone deubiquitination" evidence=IEA] [GO:0051568 "histone H3-K4
            methylation" evidence=IEA] [GO:0034729 "histone H3-K79 methylation"
            evidence=IEA] InterPro:IPR001394 InterPro:IPR001607
            InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271 CGD:CAL0000903
            GO:GO:0046872 GO:GO:0008270 GO:GO:0008234 Gene3D:3.30.40.10
            InterPro:IPR013083 GO:GO:0006511 GO:GO:0004221 EMBL:AACQ01000104
            EMBL:AACQ01000105 KO:K11366 eggNOG:COG5560 RefSeq:XP_714372.1
            RefSeq:XP_714412.1 ProteinModelPortal:Q59XT8 STRING:Q59XT8
            GeneID:3643934 GeneID:3644004 KEGG:cal:CaO19.1767
            KEGG:cal:CaO19.9336 Uniprot:Q59XT8
        Length = 613

 Score = 230 (86.0 bits), Expect = 4.0e-16, P = 4.0e-16
 Identities = 68/193 (35%), Positives = 98/193 (50%)

Query:    84 TFGGYLRSKIKCLKCLGKSELYERMMDLTVEIDGDIGTLEEALAQFTASEILVGENKYYC 143
             TF   L+S IKC  C   +E  + M+DL++E++     L ++L  FT  E L   + Y C
Sbjct:   429 TFSFELQSCIKCDSCDSITETVDPMIDLSLEVN--FTNLYQSLQSFTRDEKL---DDYNC 483

Query:   144 SRCKSYEK--------AKKKLTVLEEPNILTIVLKRFES---GNFG--KLNKSVWFPEVL 190
               C +           A KKL +   P IL+I LKRF     G+F   K+   + FP  L
Sbjct:   484 KNCNNSNNNMSTTTTSAIKKLRLKTLPQILSIQLKRFRHDILGSFQATKIQSHINFPLFL 543

Query:   191 NMAPYMSRTGDGSPMYSLYAVVVHLDVTNATFSGHYVCYVKNSHEEWFRIDDSTVIPVKL 250
             N+  Y S   D   +Y L+AVV H    N   +GHY  ++KN+   W++ DDS V  V  
Sbjct:   544 NVTEY-SVIKDTDYIYQLFAVVCHQGSIN---TGHYTVFIKNN-SNWYKFDDSVVTMVSQ 598

Query:   251 ERVLSEEAYMLLY 263
             + V++ EAY+L Y
Sbjct:   599 DVVINSEAYLLYY 611


>WB|WBGene00011507 [details] [associations]
            symbol:T05H10.1 species:6239 "Caenorhabditis elegans"
            [GO:0004221 "ubiquitin thiolesterase activity" evidence=IEA]
            [GO:0006511 "ubiquitin-dependent protein catabolic process"
            evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA]
            InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 GO:GO:0008234 GO:GO:0006511
            EMBL:Z47812 GO:GO:0004221 HSSP:Q93009 eggNOG:COG5077
            GeneTree:ENSGT00630000089581 KO:K11857 PIR:A88225 PIR:T24559
            RefSeq:NP_495686.2 ProteinModelPortal:Q22240 SMR:Q22240
            STRING:Q22240 MEROPS:C19.A38 PaxDb:Q22240 EnsemblMetazoa:T05H10.1
            GeneID:174290 KEGG:cel:CELE_T05H10.1 UCSC:T05H10.1 CTD:174290
            WormBase:T05H10.1 HOGENOM:HOG000020027 InParanoid:Q22240
            OMA:TSNEAYD NextBio:883388 Uniprot:Q22240
        Length = 1326

 Score = 185 (70.2 bits), Expect = 4.2e-16, Sum P(2) = 4.2e-16
 Identities = 52/151 (34%), Positives = 80/151 (52%)

Query:    60 MQSVCLKEFGA---KGKIAEETTLIGLTFGGYLRSKIKCLKCLGKSELYERMMDLTVEID 116
             +Q +C   F A   K K  E   LI   + G +   + CLKC  +S   +  +DL + + 
Sbjct:   180 VQELCRLMFDALEHKWKGTEHEKLIQDLYRGTMEDFVACLKCGRESVKTDYFLDLPLAVK 239

Query:   117 --GDIG---TLEEALAQFTASEILVGENKYYCSRCKSYEKAKKKLTVLEEPNILTIVLKR 171
               G I    ++EEAL  F   E+L G N+Y C  CKS + A K L + + P +LTI LKR
Sbjct:   240 PFGAIHAYKSVEEALTAFVQPELLDGSNQYMCENCKSKQDAHKGLRITQFPYLLTIQLKR 299

Query:   172 FE----SGNFGKLNKSVWFPEVLNMAPYMSR 198
             F+    + +  KLN  + FP+VL++  Y+++
Sbjct:   300 FDFDYNTMHRIKLNDKMTFPDVLDLNDYVNK 330

 Score = 101 (40.6 bits), Expect = 4.2e-16, Sum P(2) = 4.2e-16
 Identities = 29/108 (26%), Positives = 54/108 (50%)

Query:   202 GSPMYSLYAVVVHLDVTNATFSGHYVCYVKN-SHEEWFRIDDSTV---IPVKLERVL--- 254
             G  +Y L++V+VH    NA   GHY  Y+KN   + W+  +D+ V    P+++E+     
Sbjct:   400 GDNVYELFSVMVHSG--NAA-GGHYFAYIKNLDQDRWYVFNDTRVDFATPLEIEKSFGGH 456

Query:   255 -------SEEAYMLLYARHSPRPPA--LIRNNVSHGVKSKKKNLEAVD 293
                    +  AYML+Y R  P+  A  ++ N +   +K  ++  + ++
Sbjct:   457 PSGWNQSNTNAYMLMYRRIDPKRNARFILSNQLPQHIKDSQEKWKRLE 504


>UNIPROTKB|A2Q9N1 [details] [associations]
            symbol:creB "Probable ubiquitin carboxyl-terminal hydrolase
            creB" species:425011 "Aspergillus niger CBS 513.88" [GO:0004221
            "ubiquitin thiolesterase activity" evidence=ISS] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=ISS]
            [GO:0045013 "carbon catabolite repression of transcription"
            evidence=ISS] InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443
            PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 GO:GO:0008234
            GenomeReviews:AM270980_GR GO:GO:0006511 GO:GO:0004221
            eggNOG:COG5533 HOGENOM:HOG000192482 KO:K11872 OrthoDB:EOG43XZCS
            GO:GO:0045013 EMBL:AM269976 RefSeq:XP_001389270.2 GeneID:4978128
            KEGG:ang:ANI_1_1130014 Uniprot:A2Q9N1
        Length = 758

 Score = 236 (88.1 bits), Expect = 4.4e-16, Sum P(2) = 4.4e-16
 Identities = 60/195 (30%), Positives = 95/195 (48%)

Query:    58 DTMQSVCLKEFGAKGKIAEETTLIGLTFGGYLRSKIKCLKCLGKSELYERMMDLTVEIDG 117
             DT  S   +   +  K    T  +   F G L S+ +CL C   S+  E  +DL+V+++ 
Sbjct:   252 DTTDS-SRQSISSGSKTPNTTRWVHELFEGTLTSETQCLTCENVSQRDEIFLDLSVDLEQ 310

Query:   118 DIGTLEEALAQFTASEILVGENKYYCSRCKSYEKAKKKLTVLEEPNILTIVLKRFE-SGN 176
                ++   L +F+A E+L   NK++C  C   ++A+K++ +   P IL + LKRF+ + +
Sbjct:   311 H-SSVTSCLRKFSAEEMLCERNKFHCDNCGGLQEAEKRMKIKRLPRILALHLKRFKYTED 369

Query:   177 FGKLNK---SVWFPEVLNMAPYMSRTGDGSPMYSLYAVVVHLDVTNATFSGHYVCYVKNS 233
               +L K    V +P  L +        D   +Y LYAVVVH+      + GHYV  +K  
Sbjct:   370 LQRLQKLFHRVVYPYHLRLFNTTDDAEDPDRLYELYAVVVHIG--GGPYHGHYVSIIKTQ 427

Query:   234 HEEWFRIDDSTVIPV 248
                W   DD  V PV
Sbjct:   428 DRGWLLFDDEMVEPV 442

 Score = 39 (18.8 bits), Expect = 4.4e-16, Sum P(2) = 4.4e-16
 Identities = 9/34 (26%), Positives = 15/34 (44%)

Query:    25 VSPIGILSKIQKIGSHLGHGREEDAHEFLRCAVD 58
             V P   L  +++          +DAHEFL   ++
Sbjct:   197 VRPQHFLDVLRRENEMFRSAMHQDAHEFLNLVLN 230


>UNIPROTKB|C5FEI4 [details] [associations]
            symbol:MCYG_01106 "Ubiquitin C-terminal hydrolase CreB"
            species:554155 "Arthroderma otae CBS 113480" [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=ISS] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=ISS]
            [GO:0045013 "carbon catabolite repression of transcription"
            evidence=ISS] InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443
            PROSITE:PS00973 PROSITE:PS50235 GO:GO:0006511 GO:GO:0004221
            OrthoDB:EOG43XZCS GO:GO:0045013 EMBL:DS995701 RefSeq:XP_002851002.1
            GeneID:9228463 Uniprot:C5FEI4
        Length = 796

 Score = 236 (88.1 bits), Expect = 5.2e-16, Sum P(2) = 5.2e-16
 Identities = 55/168 (32%), Positives = 87/168 (51%)

Query:    85 FGGYLRSKIKCLKCLGKSELYERMMDLTVEIDGDIGTLEEALAQFTASEILVGENKYYCS 144
             F G L S+ +CL C  KS+  E  +DL+V+++    ++   L +F+  E+L   NK++C 
Sbjct:   227 FEGKLTSETECLTCEKKSQRDEVFLDLSVDLEQH-SSVTSCLRKFSEEEMLCERNKFHCD 285

Query:   145 RCKSYEKAKKKLTVLEEPNILTIVLKRFE-SGNFGKLNK---SVWFPEVLNMAPYMSRTG 200
              C   ++A+K++ +   P IL + LKRF+ + +  +L K    V +P  L +        
Sbjct:   286 NCGGLQEAEKRMKIKRLPRILALHLKRFKYTEDLQRLQKLFHRVVYPYYLRLFNTTDDAE 345

Query:   201 DGSPMYSLYAVVVHLDVTNATFSGHYVCYVKNSHEEWFRIDDSTVIPV 248
             D   +Y LYAVVVH+      + GHYV  +K     W   DD  V PV
Sbjct:   346 DPDRLYELYAVVVHIG--GGPYHGHYVAIIKTEDRGWLLFDDEMVEPV 391

 Score = 39 (18.8 bits), Expect = 5.2e-16, Sum P(2) = 5.2e-16
 Identities = 10/38 (26%), Positives = 17/38 (44%)

Query:    25 VSPIGILSKIQKIGSHLGHGREEDAHEFLRCAVDTMQS 62
             V P   L  +++          +DAHEFL   ++ + S
Sbjct:   139 VRPQHFLDVLRRENEMFRTAMHQDAHEFLNLLLNEVVS 176


>UNIPROTKB|E1C6K3 [details] [associations]
            symbol:E1C6K3 "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
            process" evidence=IEA] InterPro:IPR001394 InterPro:IPR018200
            Pfam:PF00443 PROSITE:PS00973 PROSITE:PS50235 GO:GO:0006511
            GO:GO:0004221 GeneTree:ENSGT00670000098024 EMBL:AADN02041838
            EMBL:AADN02041840 IPI:IPI00818801 Ensembl:ENSGALT00000040828
            Uniprot:E1C6K3
        Length = 376

 Score = 221 (82.9 bits), Expect = 9.9e-16, P = 9.9e-16
 Identities = 55/156 (35%), Positives = 83/156 (53%)

Query:   117 GDIGTLEEALAQFTASEILVGENKYYCSRCKSYEKAKKKLTVLEEPNILTIVLKRFESGN 176
             G++ TL + L  FT  ++L G+ K  C RCK+  +  KK ++ + P IL + LKRF    
Sbjct:   222 GEV-TLMDCLRLFTKEDVLDGDEKPTCCRCKARTRCTKKFSIQKFPKILVLHLKRFSEAR 280

Query:   177 F--GKLNKSVWFP-EVLNMAPYMSRTGDGSPMYSLYAVVVHLDVTNATFSGHYVCYVKNS 233
                 KL   V FP + L++  + S++ + + +Y+LYAV  H   +  T  GHY  Y K+ 
Sbjct:   281 IRASKLTTFVNFPLKDLDLREFASQSCNHA-VYNLYAVSNH---SGTTMGGHYTAYCKSP 336

Query:   234 -HEEWFRIDDSTVIPVKLERVLSEEAYMLLYARHSP 268
                EW   +DS V P+    V S +AY+L Y   SP
Sbjct:   337 ISSEWHSFNDSRVTPMSSSHVRSSDAYLLFYELASP 372


>CGD|CAL0004364 [details] [associations]
            symbol:orf19.2026 species:5476 "Candida albicans" [GO:0005634
            "nucleus" evidence=IEA] [GO:0051286 "cell tip" evidence=IEA]
            [GO:0005829 "cytosol" evidence=IEA] [GO:0032153 "cell division
            site" evidence=IEA] [GO:0016579 "protein deubiquitination"
            evidence=IEA] [GO:0034613 "cellular protein localization"
            evidence=IEA] [GO:0006897 "endocytosis" evidence=IEA]
            InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 CGD:CAL0004364 GO:GO:0008234
            GO:GO:0006511 GO:GO:0004221 EMBL:AACQ01000031 KO:K11872
            eggNOG:COG5077 MEROPS:C19.A62 RefSeq:XP_719475.1
            ProteinModelPortal:Q5AD41 STRING:Q5AD41 GeneID:3638879
            KEGG:cal:CaO19.2026 Uniprot:Q5AD41
        Length = 700

 Score = 225 (84.3 bits), Expect = 1.9e-15, P = 1.9e-15
 Identities = 76/275 (27%), Positives = 128/275 (46%)

Query:     4 LHSTFDVVSCLILNAKDGSYPVSPIGILSKI-QKIGSHLGHGREEDAHEFLRCAVDTMQS 62
             L++  D+   ++ N K     VSP   + K+ +K      +    DAHEF     + +  
Sbjct:   277 LYALKDLFESMVEN-KSTIGVVSPTYFIQKLKEKNFLFRQNNMHHDAHEFFNYLTNEI-- 333

Query:    63 VCLKEFGAKGKIAEETTLIGLTFGGYLRSKIKCLKCLGKSELYERMMDLTVEID-GDIG- 120
               ++    +G   ++     + F G + ++ KCL C   +   E  +DL+++I  G+   
Sbjct:   334 --IESLNKEGFTNDKNWCSDI-FRGLITNETKCLSCEKITSKQELFLDLSIDIPPGESAF 390

Query:   121 TLEEALAQFTASEILVGENKYYCSRCKSYEKAKKKLTVLEEPNILTIVLKRF----ESGN 176
             +L  AL  F+ SE L  +NK+YC+ C S ++A K + + + P +L I LKRF    +   
Sbjct:   391 SLSYALNNFSKSETLTHQNKFYCNTCSSLQEAVKTIKLKKLPEVLVINLKRFKYDEQMDK 450

Query:   177 FGKLNKSVWFPEVLNMAPYMSRTGDGSP---MYSLYAVVVHLDVTNATFSGHYVCYVKNS 233
               KL  S+ +P  L +    + T D S    +Y LYA+V+H+        GHYV   K  
Sbjct:   451 MVKLFDSINYPFKLRL---FNTTDDESLTDLLYELYALVIHIG--GGPMHGHYVSLCKIK 505

Query:   234 HEEWFRIDDSTVIPVKLERVLSEEAYMLLYARHSP 268
                W   DD TV        L E++Y++ +  + P
Sbjct:   506 AGLWLLFDDETV-------ELVEDSYVMRFFGNGP 533


>UNIPROTKB|F1NUS3 [details] [associations]
            symbol:F1NUS3 "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
            process" evidence=IEA] InterPro:IPR001394 InterPro:IPR018200
            Pfam:PF00443 PROSITE:PS00973 PROSITE:PS50235 GO:GO:0006511
            GO:GO:0004221 GeneTree:ENSGT00670000098024 EMBL:AADN02041838
            EMBL:AADN02041840 IPI:IPI00819480 Ensembl:ENSGALT00000040829
            Uniprot:F1NUS3
        Length = 447

 Score = 221 (82.9 bits), Expect = 1.9e-15, P = 1.9e-15
 Identities = 55/156 (35%), Positives = 83/156 (53%)

Query:   117 GDIGTLEEALAQFTASEILVGENKYYCSRCKSYEKAKKKLTVLEEPNILTIVLKRFESGN 176
             G++ TL + L  FT  ++L G+ K  C RCK+  +  KK ++ + P IL + LKRF    
Sbjct:   293 GEV-TLMDCLRLFTKEDVLDGDEKPTCCRCKARTRCTKKFSIQKFPKILVLHLKRFSEAR 351

Query:   177 F--GKLNKSVWFP-EVLNMAPYMSRTGDGSPMYSLYAVVVHLDVTNATFSGHYVCYVKNS 233
                 KL   V FP + L++  + S++ + + +Y+LYAV  H   +  T  GHY  Y K+ 
Sbjct:   352 IRASKLTTFVNFPLKDLDLREFASQSCNHA-VYNLYAVSNH---SGTTMGGHYTAYCKSP 407

Query:   234 -HEEWFRIDDSTVIPVKLERVLSEEAYMLLYARHSP 268
                EW   +DS V P+    V S +AY+L Y   SP
Sbjct:   408 ISSEWHSFNDSRVTPMSSSHVRSSDAYLLFYELASP 443


>DICTYBASE|DDB_G0284381 [details] [associations]
            symbol:DDB_G0284381 "putative ubiquitin
            carboxyl-terminal hydrolase (UCH)" species:44689 "Dictyostelium
            discoideum" [GO:0006511 "ubiquitin-dependent protein catabolic
            process" evidence=IEA] [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0005575 "cellular_component"
            evidence=ND] [GO:0016787 "hydrolase activity" evidence=IEA]
            [GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
            [GO:0008233 "peptidase activity" evidence=IEA] [GO:0006508
            "proteolysis" evidence=IEA] InterPro:IPR001394 InterPro:IPR006615
            InterPro:IPR018200 Pfam:PF00443 Pfam:PF06337 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS51283 SMART:SM00695
            dictyBase:DDB_G0284381 GO:GO:0008234 GO:GO:0006511
            EMBL:AAFI02000064 GO:GO:0004221 eggNOG:COG5560 KO:K11835
            RefSeq:XP_638597.1 ProteinModelPortal:Q54PQ7
            EnsemblProtists:DDB0237697 GeneID:8624568 KEGG:ddi:DDB_G0284381
            OMA:AYELPHA Uniprot:Q54PQ7
        Length = 1089

 Score = 227 (85.0 bits), Expect = 2.2e-15, P = 2.2e-15
 Identities = 58/184 (31%), Positives = 98/184 (53%)

Query:   106 ERMMDLTVEIDGDIGTLEEALAQFTASEILVGENKYYCSRCKSY-EKAKKKLTVLEEPNI 164
             ++ + L  E   +I TL + L  +T SE L   + +YC +CK++ E + KKL +   P I
Sbjct:   909 DKSIQLKTEFRNEI-TLNDCLQLYTKSEKLGTNDTWYCPQCKAHIEGSMKKLELWSAPKI 967

Query:   165 LTIVLKRFE--SGN-FGKLNKSVWFP-EVLNMAPYMSRTGDGSPMYSLYAVVVHLDVTNA 220
             L + LKRF    G+   K+N  V FP + L+++ ++    +  P+Y LYAV  H+     
Sbjct:   968 LVVHLKRFHYVHGHRHEKINAFVDFPLDNLDISQWVLNKSNPPPIYQLYAVSNHM---GG 1024

Query:   221 TFSGHYVCYVKNSHEEWFRIDDSTVIPVKLERVLSEEAYMLLYA--RHSPRPPALIRNNV 278
               SGHY   +KN+ ++W+ I DS+   +   +V + +AY+L Y   +  P+ P   +N  
Sbjct:  1025 MGSGHYTSCIKNNKDQWYLISDSSYHAIDKSKVKTSDAYVLFYELKQQPPQQPQSSQNAS 1084

Query:   279 SHGV 282
              H +
Sbjct:  1085 IHPI 1088


>ZFIN|ZDB-GENE-030131-3055 [details] [associations]
            symbol:usp19 "ubiquitin specific peptidase 19"
            species:7955 "Danio rerio" [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] [GO:0008270 "zinc ion
            binding" evidence=IEA] [GO:0021551 "central nervous system
            morphogenesis" evidence=IMP] [GO:0016787 "hydrolase activity"
            evidence=IEA] [GO:0008233 "peptidase activity" evidence=IEA]
            [GO:0046872 "metal ion binding" evidence=IEA] [GO:0008234
            "cysteine-type peptidase activity" evidence=IEA] [GO:0006508
            "proteolysis" evidence=IEA] InterPro:IPR001394 InterPro:IPR002893
            InterPro:IPR018200 Pfam:PF00443 Pfam:PF01753 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS01360 PROSITE:PS50235 PROSITE:PS50865
            ZFIN:ZDB-GENE-030131-3055 GO:GO:0046872 GO:GO:0008270 GO:GO:0008234
            InterPro:IPR008978 SUPFAM:SSF49764 GO:GO:0006511 GO:GO:0004221
            InterPro:IPR007052 InterPro:IPR017447 Pfam:PF04969 PROSITE:PS51203
            eggNOG:COG5560 GeneTree:ENSGT00670000097750 HOGENOM:HOG000074206
            HOVERGEN:HBG061889 InterPro:IPR015054 Pfam:PF08959 OMA:PQCKQHR
            OrthoDB:EOG4NVZJG EMBL:AL953864 IPI:IPI00490903
            Ensembl:ENSDART00000147778 Uniprot:B7ZDA8
        Length = 1478

 Score = 228 (85.3 bits), Expect = 2.6e-15, P = 2.6e-15
 Identities = 64/172 (37%), Positives = 90/172 (52%)

Query:   121 TLEEALAQFTASEILVGENKYYCSRCKSYEKAKKKLTVLEEPNILTIVLKRFESGNF--- 177
             TLE+ L  FT  E+L  E  +YC +C+ + +A K+L +   PN+L I LKRF   +F   
Sbjct:  1198 TLEQCLNLFTKPEVLAPEEAWYCPKCQQHREASKQLLLWRLPNVLIIQLKRFSFRSFIWR 1257

Query:   178 GKLNKSVWFP-EVLNMAPY-MSRTGD--GSPMYSLYAVVVHLDVTNATFSGHYVCYV--- 230
              K+N  V FP   L+++ + +   GD    P+Y LYAV+ H         GHY  Y    
Sbjct:  1258 DKINDMVDFPVRNLDLSKFCIGHKGDIQQPPIYDLYAVINHY---GGMIGGHYTAYARLP 1314

Query:   231 --KNSHEE---WFRIDDSTVIPVKLERVLSEEAYMLLYAR-HSP--RPPALI 274
               KNS      W   DDSTV  V+  +V++  AY+L Y R +SP  RP  L+
Sbjct:  1315 SDKNSQLSDVGWRLFDDSTVTTVEESQVVTRYAYVLFYRRRNSPVERPSHLL 1366


>WB|WBGene00010702 [details] [associations]
            symbol:usp-33 species:6239 "Caenorhabditis elegans"
            [GO:0004221 "ubiquitin thiolesterase activity" evidence=IEA]
            [GO:0006511 "ubiquitin-dependent protein catabolic process"
            evidence=IEA] InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443
            PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 GO:GO:0008234
            GO:GO:0006511 GO:GO:0004221 eggNOG:COG5533 HSSP:Q93009 EMBL:Z79601
            GeneTree:ENSGT00690000102047 PIR:T23531 RefSeq:NP_510570.2
            ProteinModelPortal:Q93875 SMR:Q93875 MEROPS:C19.A35 PaxDb:Q93875
            EnsemblMetazoa:K09A9.4 GeneID:181647 KEGG:cel:CELE_K09A9.4
            UCSC:K09A9.4 CTD:181647 WormBase:K09A9.4 HOGENOM:HOG000018261
            InParanoid:Q93875 OMA:KRFRHTM NextBio:914812 Uniprot:Q93875
        Length = 716

 Score = 201 (75.8 bits), Expect = 2.7e-15, Sum P(2) = 2.7e-15
 Identities = 52/164 (31%), Positives = 81/164 (49%)

Query:   121 TLEEALAQFTASEILVGENKYYCSRCKSYEKAKKKLTVLEEPNILTIVLKRFESGNFG-- 178
             +LE  L +F  +  L  +N+Y CS+C+    A K       P ++ I LKRF    FG  
Sbjct:   403 SLESCLDRFFQNSTLQDDNQYSCSKCEVLVDATKSTKAHRLPEVIIIQLKRFRHTMFGSC 462

Query:   179 KLNKSVWFPEVLNMAPYMSRTGDGSP-MYSLYAVVVHLDVTNATFSGHYVCYVKNSHE-E 236
             K+ K V FP  L    +   T  G P +Y L   VVH +  +  F GHYV Y ++  + +
Sbjct:   463 KVGKVVEFP--LRSQDFGRWTTSGEPALYDLVGFVVH-EGRSLEF-GHYVSYCRHEQDNQ 518

Query:   237 WFRIDDSTVIPVKLERVLSEEAYMLLYARHSPR-PPALIRNNVS 279
             W++ DD  V      +V   + Y+L+Y +H+    P++ +N  S
Sbjct:   519 WYKFDDMVVTRCDATQVAKSQPYILMYRKHTTNGEPSISQNTES 562

 Score = 69 (29.3 bits), Expect = 2.7e-15, Sum P(2) = 2.7e-15
 Identities = 17/49 (34%), Positives = 25/49 (51%)

Query:    79 TLIGLTFGGYLRSKIKCLKCLGKSELYERMMDLTVEIDGDIGTLEEALA 127
             T I   F G L ++I+C  C  +S   E  +DL++ I G+    EE  A
Sbjct:   321 TAISAIFQGVLENQIQCHSCGFRSRTIENFLDLSIPIVGE-NEFEEMYA 368


>DICTYBASE|DDB_G0293770 [details] [associations]
            symbol:DDB_G0293770 "putative ubiquitin
            carboxyl-terminal hydrolase (UCH)" species:44689 "Dictyostelium
            discoideum" [GO:0006511 "ubiquitin-dependent protein catabolic
            process" evidence=IEA] [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0005575 "cellular_component"
            evidence=ND] [GO:0016787 "hydrolase activity" evidence=IEA]
            [GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
            [GO:0008233 "peptidase activity" evidence=IEA] [GO:0006508
            "proteolysis" evidence=IEA] InterPro:IPR001394 InterPro:IPR006615
            InterPro:IPR018200 Pfam:PF00443 Pfam:PF06337 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS51283 SMART:SM00695
            dictyBase:DDB_G0293770 GO:GO:0008234 GO:GO:0006511 GO:GO:0004221
            EMBL:AAFI02000219 KO:K11835 RefSeq:XP_628978.1
            ProteinModelPortal:Q54BB6 EnsemblProtists:DDB0237691 GeneID:8629409
            KEGG:ddi:DDB_G0293770 OMA:YTAFALN ProtClustDB:CLSZ2497072
            Uniprot:Q54BB6
        Length = 1085

 Score = 226 (84.6 bits), Expect = 2.9e-15, P = 2.9e-15
 Identities = 51/148 (34%), Positives = 80/148 (54%)

Query:   122 LEEALAQFTASEILVGENKYYCSRCKSYEKAKKKLTVLEEPNILTIVLKRF--ESGNFGK 179
             LE+ +  FT  E L  E+ +YCS+CK +++A KK  +   P IL + LKRF  +  +  K
Sbjct:   835 LEQCIKLFTTEEQLGPEDPWYCSKCKEHQRATKKFDIWSSPPILVVHLKRFSYKRSHRDK 894

Query:   180 LNKSVWFP-EVLNMAPYMSRTGDGSPMYSLYAVVVHLDVTNATFSGHYVCYVKNSHEE-W 237
             L+  V FP + L+++ Y+      +P+Y L+AV  H     +   GHY  +  N  E+ W
Sbjct:   895 LDTLVKFPFKDLDLSQYVLNKDQPAPIYDLFAVSNHY---GSLGGGHYTAFALNEPEDTW 951

Query:   238 FRIDDSTVIPVKLERVLSEEAYMLLYAR 265
             F+ DDS      +  + S+ AY+L Y R
Sbjct:   952 FKFDDSHASEANINSIESDAAYVLFYRR 979


>ZFIN|ZDB-GENE-050227-1 [details] [associations]
            symbol:fbxl22 "F-box and leucine-rich repeat protein
            22" species:7955 "Danio rerio" [GO:0006511 "ubiquitin-dependent
            protein catabolic process" evidence=IEA] [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] [GO:0008270 "zinc ion
            binding" evidence=IEA] [GO:0005575 "cellular_component"
            evidence=ND] [GO:0016787 "hydrolase activity" evidence=IEA]
            [GO:0008233 "peptidase activity" evidence=IEA] [GO:0046872 "metal
            ion binding" evidence=IEA] [GO:0008234 "cysteine-type peptidase
            activity" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
            InterPro:IPR001394 InterPro:IPR001607 InterPro:IPR018200
            Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 PROSITE:PS50271 ZFIN:ZDB-GENE-050227-1
            GO:GO:0046872 GO:GO:0008270 GO:GO:0008234 Gene3D:3.30.40.10
            InterPro:IPR013083 GO:GO:0006511 GO:GO:0004221
            GeneTree:ENSGT00390000003748 EMBL:CR391977 IPI:IPI00495297
            Ensembl:ENSDART00000088884 Bgee:E7FC36 Uniprot:E7FC36
        Length = 527

 Score = 211 (79.3 bits), Expect = 2.9e-15, Sum P(2) = 2.9e-15
 Identities = 65/203 (32%), Positives = 103/203 (50%)

Query:    78 TTLIGLTFGGYLRSKIKCLKCLGKSELYERMMDLTVEI----------DGDIG---TLEE 124
             +T++   FGG L++++ CL C  +S  ++  +DL+++I          D + G   TL +
Sbjct:   311 STIVTSVFGGVLQNEVYCLICGTESRKFDPFLDLSLDIPNQFRIKTTKDQEPGPTCTLSD 370

Query:   125 ALAQFTASEILVGENKYYCSRCKSYEKAKKKLTVLEEPNILTIVLKRFESGNF--GKLNK 182
              L  FT  E L     Y C +CK  +K+ KK  + + P +L + LKRF    F   K++ 
Sbjct:   371 CLRSFTDLEELDETELYMCHKCKKRQKSTKKFWIQKLPKVLCLHLKRFHWTAFLRNKVDT 430

Query:   183 SVWFPEV-LNMAPYMSRTGDGSP---MYSLYAVVVHLDVTNATFSGHYVCYVKNSHE-EW 237
              V FP   L+M  Y+    +  P   +Y L AVVVH    +   SGHY  Y +  HE +W
Sbjct:   431 YVEFPMCGLDMKSYLLEPENSLPERCLYDLAAVVVHHG--SGIGSGHYTAYGR--HEGQW 486

Query:   238 FRIDDSTVIPVKLERVLSEEAYM 260
             +  +DSTV  V  +  L++  +M
Sbjct:   487 YHFNDSTVTLVS-KSDLTDSVWM 508

 Score = 53 (23.7 bits), Expect = 2.9e-15, Sum P(2) = 2.9e-15
 Identities = 15/34 (44%), Positives = 21/34 (61%)

Query:    26 SPIGILSKIQKI-GSHLGHGREEDAHEFLRCAVD 58
             SP  +   I KI  S  G+ +++DAHEFLR  +D
Sbjct:   242 SPDALFYVIWKIMPSFRGY-QQQDAHEFLRYLLD 274


>UNIPROTKB|E1C8T4 [details] [associations]
            symbol:E1C8T4 "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
            process" evidence=IEA] [GO:0000122 "negative regulation of
            transcription from RNA polymerase II promoter" evidence=IEA]
            [GO:0005938 "cell cortex" evidence=IEA] [GO:0016579 "protein
            deubiquitination" evidence=IEA] [GO:0030332 "cyclin binding"
            evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
            evidence=IEA] [GO:0042802 "identical protein binding" evidence=IEA]
            [GO:0045931 "positive regulation of mitotic cell cycle"
            evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
            evidence=IEA] [GO:0050821 "protein stabilization" evidence=IEA]
            InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00973
            PROSITE:PS50235 GO:GO:0005938 GO:GO:0048471 GO:GO:0050821
            GO:GO:0045931 GO:GO:0000122 GO:GO:0006511 GO:GO:0016579
            GO:GO:0004221 GeneTree:ENSGT00670000098024 EMBL:AADN02041838
            EMBL:AADN02041840 IPI:IPI00971466 Ensembl:ENSGALT00000010915
            Uniprot:E1C8T4
        Length = 573

 Score = 221 (82.9 bits), Expect = 3.6e-15, P = 3.6e-15
 Identities = 55/156 (35%), Positives = 83/156 (53%)

Query:   117 GDIGTLEEALAQFTASEILVGENKYYCSRCKSYEKAKKKLTVLEEPNILTIVLKRFESGN 176
             G++ TL + L  FT  ++L G+ K  C RCK+  +  KK ++ + P IL + LKRF    
Sbjct:   419 GEV-TLMDCLRLFTKEDVLDGDEKPTCCRCKARTRCTKKFSIQKFPKILVLHLKRFSEAR 477

Query:   177 F--GKLNKSVWFP-EVLNMAPYMSRTGDGSPMYSLYAVVVHLDVTNATFSGHYVCYVKNS 233
                 KL   V FP + L++  + S++ + + +Y+LYAV  H   +  T  GHY  Y K+ 
Sbjct:   478 IRASKLTTFVNFPLKDLDLREFASQSCNHA-VYNLYAVSNH---SGTTMGGHYTAYCKSP 533

Query:   234 -HEEWFRIDDSTVIPVKLERVLSEEAYMLLYARHSP 268
                EW   +DS V P+    V S +AY+L Y   SP
Sbjct:   534 ISSEWHSFNDSRVTPMSSSHVRSSDAYLLFYELASP 569


>RGD|1562211 [details] [associations]
            symbol:Usp51 "ubiquitin specific peptidase 51" species:10116
            "Rattus norvegicus" [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
            process" evidence=IEA] [GO:0008234 "cysteine-type peptidase
            activity" evidence=IEA] [GO:0008270 "zinc ion binding"
            evidence=IEA] InterPro:IPR001394 InterPro:IPR001607
            InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271 RGD:1562211
            GO:GO:0046872 GO:GO:0008270 GO:GO:0008234 Gene3D:3.30.40.10
            InterPro:IPR013083 GO:GO:0006511 GO:GO:0004221 KO:K11366
            GeneTree:ENSGT00690000101718 OrthoDB:EOG48PMJS CTD:158880
            EMBL:CH474063 IPI:IPI00561109 RefSeq:NP_001101722.1
            UniGene:Rn.56303 Ensembl:ENSRNOT00000029397 GeneID:317398
            KEGG:rno:317398 UCSC:RGD:1562211 NextBio:671739 Uniprot:D3ZUR6
        Length = 696

 Score = 221 (82.9 bits), Expect = 5.2e-15, P = 5.2e-15
 Identities = 56/160 (35%), Positives = 84/160 (52%)

Query:   121 TLEEALAQFTASEILVGENKYYCSRCKSYEKAKKKLTVLEEPNILTIVLKRFES-GNFG- 178
             +L + L  FT  E L    K  CSRC+SY+++ K+LT+ + P +    LKRFE  G    
Sbjct:   534 SLTDCLKWFTRPEDLGSSAKIKCSRCQSYQQSTKQLTMKKLPIVACFHLKRFEHLGKQRR 593

Query:   179 KLNKSVWFPEVLNMAPYMSRTGD----GSPM---------YSLYAVVVHLDVTNATFSGH 225
             K+N  + FP  L+M P+++ T +    G P+         YSL+AV+ H        SGH
Sbjct:   594 KINTFISFPLELDMTPFLASTKESIMKGQPLTECVPIENKYSLFAVINHHGTLE---SGH 650

Query:   226 YVCYVKNSHEEWFRIDDSTVIPVKLERVLSEEAYMLLYAR 265
             Y  +V+   ++WF  DD+ V    +E +L  E Y+L Y R
Sbjct:   651 YTSFVRQEKDQWFSCDDAVVTKATMEELLYSEGYLLFYHR 690

 Score = 163 (62.4 bits), Expect = 1.3e-08, P = 1.3e-08
 Identities = 51/176 (28%), Positives = 81/176 (46%)

Query:    24 PVSPIGILSKIQKIGSHLGHGREEDAHEFLRCAVDTMQSVCLKE-FGAKGKIAEETTLIG 82
             P  P  +L  I     HL   R++DAHEFL   +D +      +    +G +     +I 
Sbjct:   422 PHIPYKLLHLIWIHAEHLAGYRQQDAHEFLIAILDVLHRHSRDDGIEQEGNLNHCNCIID 481

Query:    83 LTFGGYLRSKIKCLKCLGKSELYERMMDLTVEID--------GDIG------TLEEALAQ 128
               F G L+S + C  C G S   +   D+++++         G  G      +L + L  
Sbjct:   482 YIFTGGLQSDVTCQVCHGVSTTIDPCWDISLDLPVSYTPGRAGSTGQKPRVISLTDCLKW 541

Query:   129 FTASEILVGENKYYCSRCKSYEKAKKKLTVLEEPNILTIVLKRFESGNFGKLNKSV 184
             FT  E L    K  CSRC+SY+++ K+LT+ + P +    LKRFE  + GK  + +
Sbjct:   542 FTRPEDLGSSAKIKCSRCQSYQQSTKQLTMKKLPIVACFHLKRFE--HLGKQRRKI 595


>UNIPROTKB|F1P4F0 [details] [associations]
            symbol:USP20 "Ubiquitin carboxyl-terminal hydrolase"
            species:9031 "Gallus gallus" [GO:0006511 "ubiquitin-dependent
            protein catabolic process" evidence=IEA] [GO:0008270 "zinc ion
            binding" evidence=IEA] [GO:0001664 "G-protein coupled receptor
            binding" evidence=IEA] [GO:0004197 "cysteine-type endopeptidase
            activity" evidence=IEA] [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0008277 "regulation of G-protein
            coupled receptor protein signaling pathway" evidence=IEA]
            [GO:0070536 "protein K63-linked deubiquitination" evidence=IEA]
            [GO:0071108 "protein K48-linked deubiquitination" evidence=IEA]
            InterPro:IPR001394 InterPro:IPR001607 InterPro:IPR006615
            InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 Pfam:PF06337
            PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271
            PROSITE:PS51283 SMART:SM00695 GO:GO:0046872 GO:GO:0008270
            Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511 GO:GO:0008277
            GO:GO:0071108 GO:GO:0070536 GO:GO:0004197 GO:GO:0004221
            GeneTree:ENSGT00690000101718 OMA:ADYGQIS EMBL:AADN02026599
            EMBL:AADN02026598 IPI:IPI00581772 Ensembl:ENSGALT00000006585
            Uniprot:F1P4F0
        Length = 903

 Score = 215 (80.7 bits), Expect = 5.6e-15, Sum P(3) = 5.6e-15
 Identities = 58/159 (36%), Positives = 82/159 (51%)

Query:   117 GDIGTLEEALAQFTASEIL--VGENKYYCSRCKSYEKAKKKLTVLEEPNILTIVLKRFES 174
             G + TLE+ LA F A++ L  +G+N Y C RCK      K   VL  P IL I LKRF  
Sbjct:   521 GPVVTLEDCLAAFFAADELKAIGDNMYSCERCKKLRNGVKYCKVLRLPEILCIHLKRFRH 580

Query:   175 G---NFGKLNKSVWFP-EVLNMAPYMSRTGDGS-PMYSLYAVVVHLDVTNATFSGHYVCY 229
                 +F K+N  V FP E L++ P++++        Y L +V+ H        SGHY+ Y
Sbjct:   581 EVMYSF-KINSHVSFPLEGLDLRPFLAKECVSQITTYDLLSVICHHGTAG---SGHYIAY 636

Query:   230 VKNS-HEEWFRIDDSTVIPVKLERVLSEEAYMLLYARHS 267
              +N  + +W+  DD  V  V    V + EAY+L Y + S
Sbjct:   637 CQNVINGQWYEFDDQYVTEVHETVVQNAEAYVLFYRKSS 675

 Score = 57 (25.1 bits), Expect = 5.6e-15, Sum P(3) = 5.6e-15
 Identities = 18/66 (27%), Positives = 30/66 (45%)

Query:     2 PGLHSTFDVVSCLILNAKDGSYPVSPIGILSKIQKIGSHLGHGREEDAHEFLRCAVDTMQ 61
             P L  ++  +   + + K  SY V P  +   I+ +        ++D  EFLRC +D + 
Sbjct:   181 PALCKSYQKLVSEVWHKKRPSYVV-PSSLSHGIKLVNPMFRGYAQQDTQEFLRCLMDQLH 239

Query:    62 SVCLKE 67
                LKE
Sbjct:   240 EE-LKE 244

 Score = 37 (18.1 bits), Expect = 5.6e-15, Sum P(3) = 5.6e-15
 Identities = 8/26 (30%), Positives = 14/26 (53%)

Query:   254 LSEEAYMLLYARHSPRPPALIRNNVS 279
             +SEE ++ L   +   P   +R NV+
Sbjct:   857 ISEETWIYLSTLYGGGPEIAVRPNVA 882


>UNIPROTKB|Q6PAW2 [details] [associations]
            symbol:usp16 "Ubiquitin carboxyl-terminal hydrolase 16"
            species:8355 "Xenopus laevis" [GO:0003713 "transcription
            coactivator activity" evidence=ISS] [GO:0004197 "cysteine-type
            endopeptidase activity" evidence=ISS] [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=ISS] [GO:0004843
            "ubiquitin-specific protease activity" evidence=ISS] [GO:0005634
            "nucleus" evidence=ISS] [GO:0007067 "mitosis" evidence=ISS]
            [GO:0008270 "zinc ion binding" evidence=ISS] [GO:0009952
            "anterior/posterior pattern specification" evidence=IMP]
            [GO:0016578 "histone deubiquitination" evidence=ISS] [GO:0042393
            "histone binding" evidence=ISS] [GO:0043130 "ubiquitin binding"
            evidence=ISS] [GO:0045893 "positive regulation of transcription,
            DNA-dependent" evidence=ISS] [GO:0051289 "protein
            homotetramerization" evidence=ISS] InterPro:IPR001394
            InterPro:IPR001607 InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148
            PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271
            GO:GO:0005634 GO:GO:0045893 GO:GO:0051301 GO:GO:0007067
            GO:GO:0009952 GO:GO:0046872 GO:GO:0008270 GO:GO:0006351
            GO:GO:0003713 GO:GO:0051289 Gene3D:3.30.40.10 InterPro:IPR013083
            GO:GO:0006511 GO:GO:0042393 GO:GO:0043130 GO:GO:0004197
            GO:GO:0016578 GO:GO:0004843 GO:GO:0004221 HSSP:P40818 CTD:10600
            HOVERGEN:HBG062704 KO:K11844 EMBL:BC060022 RefSeq:NP_001083244.1
            UniGene:Xl.32808 ProteinModelPortal:Q6PAW2 SMR:Q6PAW2 GeneID:398823
            KEGG:xla:398823 Xenbase:XB-GENE-1007170 Uniprot:Q6PAW2
        Length = 901

 Score = 152 (58.6 bits), Expect = 7.5e-15, Sum P(5) = 7.5e-15
 Identities = 36/94 (38%), Positives = 53/94 (56%)

Query:   149 YEKAKKKLTVLEEPNILTIVLKRFESGNFG--KLNKSVWFPEVLNMAPYMSRT------G 200
             Y  AKK++ V     ILT+ LKRF+   F   K+N+ + FPEVL++AP+ +        G
Sbjct:   754 YTNAKKQMLVSNPSPILTLHLKRFQQNGFNLRKINRHIKFPEVLDLAPFCTAKCKNVPEG 813

Query:   201 DGSPMYSLYAVVVHLDVTNATFSGHYVCYVKNSH 234
             +   +YSLY V+ H   + +  SGHY  +VK  H
Sbjct:   814 ESRLLYSLYGVIEH---SGSMRSGHYTAFVKLRH 844

 Score = 81 (33.6 bits), Expect = 7.5e-15, Sum P(5) = 7.5e-15
 Identities = 16/29 (55%), Positives = 19/29 (65%)

Query:   237 WFRIDDSTVIPVKLERVLSEEAYMLLYAR 265
             W+ I DS V  V L RVLS +AY+L Y R
Sbjct:   871 WYHISDSHVQAVSLSRVLSSQAYLLFYER 899

 Score = 60 (26.2 bits), Expect = 7.5e-15, Sum P(5) = 7.5e-15
 Identities = 13/35 (37%), Positives = 21/35 (60%)

Query:    85 FGGYLRSKIKCLKCLGKSELYERMMDLTVEIDGDI 119
             FGG L S I C +C   S ++E  +DL++ +  D+
Sbjct:   359 FGGELTSTIMCEECHTVSLVHEPFLDLSLPVLDDL 393

 Score = 55 (24.4 bits), Expect = 7.5e-15, Sum P(5) = 7.5e-15
 Identities = 11/21 (52%), Positives = 12/21 (57%)

Query:   126 LAQFTASEILVGENKYYCSRC 146
             L QFT  E L G NK  C+ C
Sbjct:   714 LYQFTHKETLTGNNKLLCNVC 734

 Score = 41 (19.5 bits), Expect = 7.5e-15, Sum P(5) = 7.5e-15
 Identities = 10/37 (27%), Positives = 20/37 (54%)

Query:    25 VSPIGILSKIQKIGSHLGHGREEDAHEFLRCAVDTMQ 61
             V+P  + S++ K        +++D+ E LR  +D M+
Sbjct:   278 VTPKELFSQVCKKAIRFKGYQQQDSQELLRYLLDGMR 314


>UNIPROTKB|Q28CN3 [details] [associations]
            symbol:usp33 "Ubiquitin carboxyl-terminal hydrolase 33"
            species:8364 "Xenopus (Silurana) tropicalis" [GO:0004197
            "cysteine-type endopeptidase activity" evidence=ISS] [GO:0004221
            "ubiquitin thiolesterase activity" evidence=ISS] [GO:0007411 "axon
            guidance" evidence=ISS] [GO:0008270 "zinc ion binding"
            evidence=ISS] [GO:0008277 "regulation of G-protein coupled receptor
            protein signaling pathway" evidence=ISS] [GO:0016477 "cell
            migration" evidence=ISS] [GO:0016579 "protein deubiquitination"
            evidence=ISS] [GO:0070536 "protein K63-linked deubiquitination"
            evidence=ISS] [GO:0071108 "protein K48-linked deubiquitination"
            evidence=ISS] InterPro:IPR001394 InterPro:IPR001607
            InterPro:IPR006615 InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148
            Pfam:PF06337 PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235
            PROSITE:PS50271 PROSITE:PS51283 SMART:SM00695 GO:GO:0048471
            GO:GO:0007411 GO:GO:0016477 GO:GO:0046872 GO:GO:0008270
            GO:GO:0006897 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511
            GO:GO:0008277 GO:GO:0071108 GO:GO:0070536 GO:GO:0004197
            GO:GO:0004221 eggNOG:COG5560 HOGENOM:HOG000286031
            HOVERGEN:HBG054196 KO:K11848 MEROPS:C19.037 CTD:23032 EMBL:CR926290
            EMBL:BC171081 RefSeq:NP_001016228.1 UniGene:Str.42260
            ProteinModelPortal:Q28CN3 SMR:Q28CN3 GeneID:548982 KEGG:xtr:548982
            Xenbase:XB-GENE-1016674 Uniprot:Q28CN3
        Length = 892

 Score = 209 (78.6 bits), Expect = 1.0e-14, Sum P(3) = 1.0e-14
 Identities = 54/156 (34%), Positives = 80/156 (51%)

Query:   117 GDIGTLEEALAQFTASEILVGENKYYCSRCKSYEKAKKKLTVLEEPNILTIVLKRFESG- 175
             G   TL++ LA F A + L G+N Y C +CK      K   V + P IL I LKRF    
Sbjct:   514 GPTVTLQDCLAAFFARDELKGDNMYSCEKCKKLRNGVKFCKVQKFPEILCIHLKRFRHEL 573

Query:   176 NFG-KLNKSVWFP-EVLNMAPYMSRTGDGSPM-YSLYAVVVHLDVTNATFSGHYVCYVKN 232
              F  K+   V FP E L++ P++++      + Y L +V+ H    +   SGHY+ Y +N
Sbjct:   574 MFSTKIGTHVSFPLEGLDLQPFLAKDSPSQIVTYDLLSVICHHGTAS---SGHYIAYCRN 630

Query:   233 S-HEEWFRIDDSTVIPVKLERVLSEEAYMLLYARHS 267
             + +  W+  DD +V  V    V + EAY+L Y + S
Sbjct:   631 NLNNLWYEFDDQSVTEVSEATVQNAEAYVLFYRKAS 666

 Score = 57 (25.1 bits), Expect = 1.0e-14, Sum P(3) = 1.0e-14
 Identities = 18/60 (30%), Positives = 28/60 (46%)

Query:    71 KGKIAEETTLIGLTFGGYLRSKIKCLKCLGKSELYERMMDLTVEIDG--DIGTLEEALAQ 128
             K K  +  ++I   F G + S ++CL C   S   E   DL++ I G  D+  L  +  Q
Sbjct:   423 KRKQKKYHSVIADIFDGTIVSSVQCLTCDRVSVTLETFQDLSLPIPGKEDLAKLHSSSHQ 482

 Score = 41 (19.5 bits), Expect = 1.0e-14, Sum P(3) = 1.0e-14
 Identities = 8/26 (30%), Positives = 15/26 (57%)

Query:   254 LSEEAYMLLYARHSPRPPALIRNNVS 279
             +SEE ++ L + +   P   +R NV+
Sbjct:   847 ISEETWLFLQSIYGGGPEITLRQNVT 872


>UNIPROTKB|Q5U252 [details] [associations]
            symbol:usp47 "Ubiquitin carboxyl-terminal hydrolase 47"
            species:8355 "Xenopus laevis" [GO:0004843 "ubiquitin-specific
            protease activity" evidence=ISS] [GO:0005737 "cytoplasm"
            evidence=ISS] [GO:0006284 "base-excision repair" evidence=ISS]
            [GO:0006974 "response to DNA damage stimulus" evidence=ISS]
            [GO:0035520 "monoubiquitinated protein deubiquitination"
            evidence=ISS] InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443
            PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 GO:GO:0005737
            GO:GO:0006284 GO:GO:0006511 GO:GO:0004843 GO:GO:0004221
            GO:GO:0035520 MEROPS:C19.055 CTD:55031 HOVERGEN:HBG058854 KO:K11857
            EMBL:BC086278 RefSeq:NP_001088634.1 UniGene:Xl.49309
            ProteinModelPortal:Q5U252 GeneID:495686 KEGG:xla:495686
            Xenbase:XB-GENE-5760104 Uniprot:Q5U252
        Length = 1350

 Score = 206 (77.6 bits), Expect = 1.4e-14, Sum P(2) = 1.4e-14
 Identities = 56/157 (35%), Positives = 84/157 (53%)

Query:    60 MQSVCLKEFGA---KGKIAEETTLIGLTFGGYLRSKIKCLKCLGKSELYERMMDLTVEID 116
             +Q +C   F A   K K  E+  LI   + G L+  +KCL+C  +S   +  +D+ + I 
Sbjct:   258 VQELCRVMFDALEQKWKQTEQADLINQLYQGKLKDYVKCLECGYESWRIDTFLDIPLVIR 317

Query:   117 --GD---IGTLEEALAQFTASEILVGENKYYCSRCKSYEKAKKKLTVLEEPNILTIVLKR 171
               G     G++EEAL  F   E L G N+Y+C RCK    A+K L  L  P +LT+ LKR
Sbjct:   318 PYGSNTAFGSMEEALHAFIQPETLDGPNQYFCERCKRKCDARKGLKFLHFPYLLTLQLKR 377

Query:   172 FE----SGNFGKLNKSVWFPEVLNMAPYMSRTGDGSP 204
             F+    S +  KLN  + FP+ L+M+P++    + SP
Sbjct:   378 FDFDYTSMHRIKLNDRMTFPDELDMSPFIDMEDEKSP 414

 Score = 64 (27.6 bits), Expect = 1.4e-14, Sum P(2) = 1.4e-14
 Identities = 14/64 (21%), Positives = 31/64 (48%)

Query:   191 NMAPYMSRTGDGSPMYSLYAVVVHLDVTNATFSGHYVCYVKNSHE-EWFRIDDSTVIPVK 249
             N+        + + +Y L++V+VH   + +   GHY   +K+  + +W+  +D  V  + 
Sbjct:   456 NIEKLNKSVAEKNSLYELFSVMVH---SGSAAGGHYYACIKSFADGQWYSFNDQHVSRIT 512

Query:   250 LERV 253
              E +
Sbjct:   513 QEDI 516


>UNIPROTKB|E1C214 [details] [associations]
            symbol:USP16 "Ubiquitin carboxyl-terminal hydrolase"
            species:9031 "Gallus gallus" [GO:0006511 "ubiquitin-dependent
            protein catabolic process" evidence=IEA] [GO:0008270 "zinc ion
            binding" evidence=IEA] [GO:0003713 "transcription coactivator
            activity" evidence=IEA] [GO:0004197 "cysteine-type endopeptidase
            activity" evidence=IEA] [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0004843 "ubiquitin-specific protease
            activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0006974 "response to DNA damage stimulus" evidence=IEA]
            [GO:0007067 "mitosis" evidence=IEA] [GO:0042393 "histone binding"
            evidence=IEA] [GO:0043130 "ubiquitin binding" evidence=IEA]
            [GO:0045893 "positive regulation of transcription, DNA-dependent"
            evidence=IEA] [GO:0045901 "positive regulation of translational
            elongation" evidence=IEA] [GO:0051289 "protein homotetramerization"
            evidence=IEA] [GO:0070537 "histone H2A K63-linked deubiquitination"
            evidence=IEA] InterPro:IPR001394 InterPro:IPR001607
            InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271 GO:GO:0005634
            GO:GO:0045893 GO:GO:0007067 GO:GO:0046872 GO:GO:0008270
            GO:GO:0003713 GO:GO:0051289 Gene3D:3.30.40.10 InterPro:IPR013083
            GO:GO:0006511 GO:GO:0004197 GO:GO:0016578 GO:GO:0004843
            GO:GO:0004221 EMBL:AC147443 GeneTree:ENSGT00690000102047
            OMA:CKNVAEE IPI:IPI00591883 Ensembl:ENSGALT00000025494
            Uniprot:E1C214
        Length = 809

 Score = 168 (64.2 bits), Expect = 1.8e-14, Sum P(4) = 1.8e-14
 Identities = 48/141 (34%), Positives = 74/141 (52%)

Query:   114 EIDGDIGTLEEALAQFTASEILVGENKYYCSRC----------KSYEK-----AKKKLTV 158
             +++ + G++ + L QFT +E L   NK  C  C          K+ EK     AKK++ +
Sbjct:   612 DLNPEEGSIHQCLYQFTRNEKLSENNKLLCDICTQRRYGPKNTKTDEKHVYTNAKKQMLI 671

Query:   159 LEEPNILTIVLKRFESGNFG--KLNKSVWFPEVLNMAPYMS----RTGDGSP--MYSLYA 210
                P ILT+ LKRF+   F   K+N+ + FPEV+++AP+ +       +G+   +YSLY 
Sbjct:   672 SLAPPILTLHLKRFQQAGFNLRKVNRHIKFPEVIDLAPFCTVKCKNVAEGNTKVLYSLYG 731

Query:   211 VVVHLDVTNATFSGHYVCYVK 231
             VV H   +    SGHY  Y K
Sbjct:   732 VVEH---SGTMRSGHYTAYAK 749

 Score = 75 (31.5 bits), Expect = 1.8e-14, Sum P(4) = 1.8e-14
 Identities = 14/30 (46%), Positives = 19/30 (63%)

Query:   236 EWFRIDDSTVIPVKLERVLSEEAYMLLYAR 265
             +WF I D+ V  V   +VLS +AY+L Y R
Sbjct:   778 QWFHISDTHVQAVSTSKVLSSQAYLLFYER 807

 Score = 63 (27.2 bits), Expect = 1.8e-14, Sum P(4) = 1.8e-14
 Identities = 17/54 (31%), Positives = 28/54 (51%)

Query:    65 LKEFGAKGKIAEETTLIGLTFGGYLRSKIKCLKCLGKSELYERMMDLTVEIDGD 118
             +KE+  K  I    + +   FGG L S I C +C   S ++E  +DL++ +  D
Sbjct:   327 IKEYEKKKGIK---SFVDRIFGGELTSTIMCEECRTVSLVHESFLDLSLPVLDD 377

 Score = 39 (18.8 bits), Expect = 1.8e-14, Sum P(4) = 1.8e-14
 Identities = 9/38 (23%), Positives = 21/38 (55%)

Query:    25 VSPIGILSKIQKIGSHLGHGREEDAHEFLRCAVDTMQS 62
             V+P  + +++ K        +++D+ E LR  +D M++
Sbjct:   261 VTPKELFAQVCKKAIRFKGYQQQDSQELLRYLLDGMRA 298


>UNIPROTKB|A1A5G2 [details] [associations]
            symbol:usp47 "Ubiquitin carboxyl-terminal hydrolase 47"
            species:8364 "Xenopus (Silurana) tropicalis" [GO:0004843
            "ubiquitin-specific protease activity" evidence=ISS] [GO:0005737
            "cytoplasm" evidence=ISS] [GO:0006284 "base-excision repair"
            evidence=ISS] [GO:0006974 "response to DNA damage stimulus"
            evidence=ISS] [GO:0035520 "monoubiquitinated protein
            deubiquitination" evidence=ISS] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 GO:GO:0005737 GO:GO:0006284 GO:GO:0006511
            GO:GO:0004843 GO:GO:0004221 GO:GO:0035520 eggNOG:COG5077
            MEROPS:C19.055 CTD:55031 HOVERGEN:HBG058854 KO:K11857 EMBL:BC128636
            RefSeq:NP_001090710.1 UniGene:Str.45630 ProteinModelPortal:A1A5G2
            STRING:A1A5G2 GeneID:100036690 KEGG:xtr:100036690
            Xenbase:XB-GENE-5760041 HOGENOM:HOG000037524 Uniprot:A1A5G2
        Length = 1354

 Score = 205 (77.2 bits), Expect = 1.8e-14, Sum P(2) = 1.8e-14
 Identities = 56/157 (35%), Positives = 84/157 (53%)

Query:    60 MQSVCLKEFGA---KGKIAEETTLIGLTFGGYLRSKIKCLKCLGKSELYERMMDLTVEID 116
             +Q +C   F A   K K  E+  LI   + G L+  +KCL+C  +S   +  +D+ + I 
Sbjct:   259 VQELCRVMFDALEQKWKQTEQADLINQLYQGKLKDYVKCLECGYESWRIDTFLDIPLVIR 318

Query:   117 --GD---IGTLEEALAQFTASEILVGENKYYCSRCKSYEKAKKKLTVLEEPNILTIVLKR 171
               G     G++EEAL  F   E L G N+Y+C RCK    A+K L  L  P +LT+ LKR
Sbjct:   319 PFGSNTAFGSMEEALQAFIQPETLDGPNQYFCERCKRKCDARKGLKFLHFPYLLTLQLKR 378

Query:   172 FE----SGNFGKLNKSVWFPEVLNMAPYMSRTGDGSP 204
             F+    S +  KLN  + FP+ L+M+P++    + SP
Sbjct:   379 FDFDYTSMHRIKLNDRMTFPDELDMSPFIDVEDEKSP 415

 Score = 64 (27.6 bits), Expect = 1.8e-14, Sum P(2) = 1.8e-14
 Identities = 14/64 (21%), Positives = 31/64 (48%)

Query:   191 NMAPYMSRTGDGSPMYSLYAVVVHLDVTNATFSGHYVCYVKNSHE-EWFRIDDSTVIPVK 249
             N+        + + +Y L++V+VH   + +   GHY   +K+  + +W+  +D  V  + 
Sbjct:   457 NIEKLNKSVSEKNSLYELFSVMVH---SGSAAGGHYYACIKSFADGQWYSFNDQHVSRIT 513

Query:   250 LERV 253
              E +
Sbjct:   514 QEDI 517


>UNIPROTKB|F1P9H5 [details] [associations]
            symbol:USP46 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] InterPro:IPR001394
            Pfam:PF00443 PROSITE:PS50235 GO:GO:0006511 GO:GO:0004221
            GeneTree:ENSGT00650000093027 EMBL:AAEX03009057 EMBL:AAEX03009058
            Ensembl:ENSCAFT00000003188 Uniprot:F1P9H5
        Length = 201

 Score = 192 (72.6 bits), Expect = 1.9e-14, P = 1.9e-14
 Identities = 61/188 (32%), Positives = 94/188 (50%)

Query:    46 EEDAHEFLRCAVDTMQSVCLKEFGAK---GKI--------AE----ETTLIGLTFGGYLR 90
             ++DAHEFL   ++T+  +  +E   +   GK+        AE    E T +   F G L 
Sbjct:     2 QQDAHEFLNYLLNTIADILQEEKKQEKQNGKLKNGNMNEPAENNKPELTWVHEIFQGTLT 61

Query:    91 SKIKCLKCLGKSELYERMMDLTVEIDGDIGTLEEALAQFTASEILVGENKYYCSRCKSYE 150
             ++ +CL C   S   E  + L+V+++ +  T    L  F+ +E L  E KYYC  C S +
Sbjct:    62 NETRCLNCETVSSKDEDFLALSVDVEQNTST--HCLRDFSNTETLCSEQKYYCETCCSKQ 119

Query:   151 KAKKKLTVLEEPNILTIVLKRF----ESGNFGKLNKSVWFPEVLNMAPYMSRTGDGSPMY 206
             +A+K++ V + P IL + LKRF    +   + KL+  V FP  L +    S   +   MY
Sbjct:   120 EAQKRMRVKKLPMILALHLKRFKYMEQLHRYTKLSYRVVFPLELRLFNTSSDAVNLDRMY 179

Query:   207 SLYAVVVH 214
              L AVVVH
Sbjct:   180 DLVAVVVH 187


>UNIPROTKB|F1NE88 [details] [associations]
            symbol:USP4 "Ubiquitin carboxyl-terminal hydrolase"
            species:9031 "Gallus gallus" [GO:0006511 "ubiquitin-dependent
            protein catabolic process" evidence=IEA] [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] [GO:0004843
            "ubiquitin-specific protease activity" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
            [GO:0016579 "protein deubiquitination" evidence=IEA] [GO:0031397
            "negative regulation of protein ubiquitination" evidence=IEA]
            [GO:0031647 "regulation of protein stability" evidence=IEA]
            [GO:0031685 "adenosine receptor binding" evidence=IEA] [GO:0034394
            "protein localization to cell surface" evidence=IEA]
            InterPro:IPR001394 InterPro:IPR006615 InterPro:IPR018200
            Pfam:PF00443 Pfam:PF06337 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 PROSITE:PS51283 SMART:SM00695 GO:GO:0005634
            GO:GO:0005737 GO:GO:0031647 GO:GO:0006511 GO:GO:0034394
            GO:GO:0031397 GO:GO:0004843 GO:GO:0016579 GO:GO:0004221
            GeneTree:ENSGT00670000097750 EMBL:AADN02056463 EMBL:AADN02056462
            IPI:IPI00586703 Ensembl:ENSGALT00000006026 Uniprot:F1NE88
        Length = 963

 Score = 214 (80.4 bits), Expect = 2.1e-14, Sum P(2) = 2.1e-14
 Identities = 54/160 (33%), Positives = 82/160 (51%)

Query:   122 LEEALAQFTASEILVGENKYYCSRCKSYEKAKKKLTVLEEPNILTIVLKRFESGNF--GK 179
             L++ +  FT  E L   + +YC  CK +++A KK  +   P IL + LKRF    +   K
Sbjct:   797 LKDCIELFTTMETLGEHDPWYCPNCKKHQQATKKFDLWSLPKILVVHLKRFSYSRYWRDK 856

Query:   180 LNKSVWFP-EVLNMAPYMSRTGDGSPMYSLYAVVVHLDVTNATFSGHYVCYVKNS-HEEW 237
             L+  V FP   LNM+ ++     GS +Y L AV  H         GHY  Y KN  + +W
Sbjct:   857 LDTVVEFPIRGLNMSEFVCDPRGGSYVYDLIAVSNHYGAMGV---GHYTAYAKNKVNGKW 913

Query:   238 FRIDDSTVIPVKLERVLSEEAYMLLYAR-----H-SPRPP 271
             +  DDS+V     ++++++ AY+L Y R     H +P PP
Sbjct:   914 YYFDDSSVSLASEDQIVTKAAYVLFYQRRDNEEHVAPSPP 953

 Score = 50 (22.7 bits), Expect = 2.1e-14, Sum P(2) = 2.1e-14
 Identities = 13/54 (24%), Positives = 26/54 (48%)

Query:    62 SVCLKEFGAKGKIAEETTLIGLTFGGYLRSKIKCLKCLGKSELYERMMDLTVEI 115
             SV  KE     ++  ++ ++ + F G  +S + C KC   S  ++    LT+ +
Sbjct:   453 SVVAKEAWENHRLRNDSIIVDI-FHGLFKSTLVCPKCSKVSVTFDPFCYLTLPL 505


>UNIPROTKB|F1NE89 [details] [associations]
            symbol:USP4 "Ubiquitin carboxyl-terminal hydrolase"
            species:9031 "Gallus gallus" [GO:0006511 "ubiquitin-dependent
            protein catabolic process" evidence=IEA] [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] [GO:0004843
            "ubiquitin-specific protease activity" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
            [GO:0016579 "protein deubiquitination" evidence=IEA] [GO:0031397
            "negative regulation of protein ubiquitination" evidence=IEA]
            [GO:0031647 "regulation of protein stability" evidence=IEA]
            [GO:0031685 "adenosine receptor binding" evidence=IEA] [GO:0034394
            "protein localization to cell surface" evidence=IEA]
            InterPro:IPR001394 InterPro:IPR006615 InterPro:IPR018200
            Pfam:PF00443 Pfam:PF06337 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 PROSITE:PS51283 SMART:SM00695 GO:GO:0005634
            GO:GO:0005737 GO:GO:0031647 GO:GO:0006511 GO:GO:0034394
            GO:GO:0031397 GO:GO:0004843 GO:GO:0016579 GO:GO:0004221
            GeneTree:ENSGT00670000097750 OMA:CERISRY EMBL:AADN02056463
            EMBL:AADN02056462 IPI:IPI00596700 Ensembl:ENSGALT00000006024
            Uniprot:F1NE89
        Length = 966

 Score = 214 (80.4 bits), Expect = 2.1e-14, Sum P(2) = 2.1e-14
 Identities = 54/160 (33%), Positives = 82/160 (51%)

Query:   122 LEEALAQFTASEILVGENKYYCSRCKSYEKAKKKLTVLEEPNILTIVLKRFESGNF--GK 179
             L++ +  FT  E L   + +YC  CK +++A KK  +   P IL + LKRF    +   K
Sbjct:   800 LKDCIELFTTMETLGEHDPWYCPNCKKHQQATKKFDLWSLPKILVVHLKRFSYSRYWRDK 859

Query:   180 LNKSVWFP-EVLNMAPYMSRTGDGSPMYSLYAVVVHLDVTNATFSGHYVCYVKNS-HEEW 237
             L+  V FP   LNM+ ++     GS +Y L AV  H         GHY  Y KN  + +W
Sbjct:   860 LDTVVEFPIRGLNMSEFVCDPRGGSYVYDLIAVSNHYGAMGV---GHYTAYAKNKVNGKW 916

Query:   238 FRIDDSTVIPVKLERVLSEEAYMLLYAR-----H-SPRPP 271
             +  DDS+V     ++++++ AY+L Y R     H +P PP
Sbjct:   917 YYFDDSSVSLASEDQIVTKAAYVLFYQRRDNEEHVAPSPP 956

 Score = 50 (22.7 bits), Expect = 2.1e-14, Sum P(2) = 2.1e-14
 Identities = 13/54 (24%), Positives = 26/54 (48%)

Query:    62 SVCLKEFGAKGKIAEETTLIGLTFGGYLRSKIKCLKCLGKSELYERMMDLTVEI 115
             SV  KE     ++  ++ ++ + F G  +S + C KC   S  ++    LT+ +
Sbjct:   456 SVVAKEAWENHRLRNDSIIVDI-FHGLFKSTLVCPKCSKVSVTFDPFCYLTLPL 508


>UNIPROTKB|F1NPR3 [details] [associations]
            symbol:USP1 "Ubiquitin carboxyl-terminal hydrolase"
            species:9031 "Gallus gallus" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0009411 "response to UV"
            evidence=IEA] [GO:0035520 "monoubiquitinated protein
            deubiquitination" evidence=IEA] [GO:0004843 "ubiquitin-specific
            protease activity" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0006282 "regulation of DNA repair" evidence=IEA]
            InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 GO:GO:0005634 GO:GO:0009411
            GO:GO:0006511 GO:GO:0004843 GO:GO:0004221 GO:GO:0035520
            GO:GO:0006282 GeneTree:ENSGT00650000093027 OMA:ISSGHYT
            EMBL:AADN02012482 EMBL:AADN02012483 IPI:IPI00589259
            Ensembl:ENSGALT00000017833 ArrayExpress:F1NPR3 Uniprot:F1NPR3
        Length = 736

 Score = 198 (74.8 bits), Expect = 2.1e-14, Sum P(2) = 2.1e-14
 Identities = 63/225 (28%), Positives = 106/225 (47%)

Query:   106 ERMMDLTVEIDGDIGTLEEALAQFTASEILVGENKYYCSRCKSYEKAKKKLTVLEEPNIL 165
             E   +++ E   ++ TL+ A++QF + E +VGE+KY+C  C  Y +A++ L   + P ++
Sbjct:   422 EESSEISPEPKTEMKTLKWAISQFASVERIVGEDKYFCENCHHYTEAERSLLFDKMPEVI 481

Query:   166 TIVLKRFES--------GNFGKLNKSVWFPEVLNMAPYMSR-TGDGSPMYSLYAVVVHLD 216
             TI LK F +        G   K+N  +  P  L++  + ++ T D    Y L+AVV+H  
Sbjct:   482 TIHLKCFAASGLEFDCYGGLSKINTPLLTPLKLSLEEWSTKPTND---TYGLFAVVMHSG 538

Query:   217 VTNATFSGHYVCYVKNSHEEWFRIDDSTVIP------VKLERVLSEEAYMLLYARHSPRP 270
             +T +  SGHY   VK +      +D    I       +K E +  EEA            
Sbjct:   539 ITIS--SGHYTASVKITDLNSLELDKGNFITAQMCETIKPEPLNEEEARTAAEDYDDGEV 596

Query:   271 PALIRNNVSHGVKSKKKNLEAVDLNNTSKIRSNSYIPSLDSKAQQ 315
                +  N   G    KKN+EAV L    K +S+  + S  + +++
Sbjct:   597 SFRVNGNAQPGKVLNKKNMEAVGLLGGQKSKSDCDLYSKPASSEK 641

 Score = 64 (27.6 bits), Expect = 2.1e-14, Sum P(2) = 2.1e-14
 Identities = 22/82 (26%), Positives = 35/82 (42%)

Query:    45 REEDAHEFLRCAVDTMQSVCLKEFGAKGKIAEETTLIGLTFGGYLRSKIKCLKCLGKSEL 104
             +EED HE         +    KE   +G       L+   F G L  + +CL+C   +E 
Sbjct:   343 KEEDGHEPASPVESHTEKGTEKEPKKEGTELAVFELVEKLFQGQLVLRTRCLECECFTER 402

Query:   105 YERMMDLTVEIDGD-IGTLEEA 125
              E   D++V +  D +   EE+
Sbjct:   403 REDFQDISVPVQEDELSKTEES 424

 Score = 45 (20.9 bits), Expect = 2.0e-12, Sum P(2) = 2.0e-12
 Identities = 9/38 (23%), Positives = 19/38 (50%)

Query:    27 PIGILSKIQKIGSHLGHGREEDAHEFLRCAVDTMQSVC 64
             P  +L+ ++++        + DA E L+C +  +Q  C
Sbjct:   122 PRRLLNTLRELNPMYEGYLQHDAQEVLQCILGNIQETC 159


>UNIPROTKB|F1RYM1 [details] [associations]
            symbol:USP50 "Ubiquitin carboxyl-terminal hydrolase"
            species:9823 "Sus scrofa" [GO:0008234 "cysteine-type peptidase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 GO:GO:0008234 GO:GO:0006511 GO:GO:0004221
            GeneTree:ENSGT00670000097591 OMA:HFQGVTG EMBL:CU469118
            Ensembl:ENSSSCT00000005123 Uniprot:F1RYM1
        Length = 376

 Score = 209 (78.6 bits), Expect = 2.5e-14, P = 2.5e-14
 Identities = 58/198 (29%), Positives = 100/198 (50%)

Query:    74 IAEETTLIGLTFGGYLRSKIKCLKCLG---KSELYERMMDLTVEIDGDIGTLEEALAQFT 130
             IA E+++I   F G L   I CLKC     K+E++  ++ L +  + +  +L++ L  F 
Sbjct:   171 IASESSIITRLFEGQLSYSIICLKCENCTYKNEVFT-VLPLPIPSEYEC-SLQDCLQCFF 228

Query:   131 ASEILVGENKYYCSRCKSYEKAKKKLTVLEEPNILTIVLKRFES-GNFG-KLNKSVWFPE 188
               + L   N+ +CS C++ ++   + ++ + P I+   LKRF+  G    KL   + +P 
Sbjct:   229 QQDTLTWNNQIHCSFCETKQETAVRASISKAPKIIVFHLKRFDILGTMKRKLRTDIHYPL 288

Query:   189 V-LNMAPYMSRTGDGSPMYSLYAVVVHLDVTNATFSGHYVCYVKNS-HEEWFRIDDSTVI 246
               L++ PY+       P Y+L AVV H    +    GHY  + KNS  + W+  DD+ V 
Sbjct:   289 TNLDLTPYICPIFRKHPKYNLCAVVNHFGDLDG---GHYTAFCKNSVTQAWYSFDDTRVS 345

Query:   247 PVKLERVLSEEAYMLLYA 264
              +    V +  AY+L Y+
Sbjct:   346 EIPDTSVQTATAYLLFYS 363


>CGD|CAL0003741 [details] [associations]
            symbol:DOA4 species:5476 "Candida albicans" [GO:0071285
            "cellular response to lithium ion" evidence=IMP] [GO:0005768
            "endosome" evidence=IEA] [GO:0000502 "proteasome complex"
            evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0006275
            "regulation of DNA replication" evidence=IEA] [GO:0006897
            "endocytosis" evidence=IEA] [GO:0010992 "ubiquitin homeostasis"
            evidence=IEA] [GO:0010995 "free ubiquitin chain depolymerization"
            evidence=IEA] [GO:0043162 "ubiquitin-dependent protein catabolic
            process via the multivesicular body sorting pathway" evidence=IEA]
            [GO:0004175 "endopeptidase activity" evidence=IEA] [GO:0004843
            "ubiquitin-specific protease activity" evidence=IEA] [GO:0004221
            "ubiquitin thiolesterase activity" evidence=IEA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 CGD:CAL0003741 GO:GO:0008234 Gene3D:3.40.250.10
            InterPro:IPR001763 SUPFAM:SSF52821 GO:GO:0006511 GO:GO:0004221
            GO:GO:0071285 eggNOG:COG5533 EMBL:AACQ01000092 KO:K11839
            RefSeq:XP_715008.1 ProteinModelPortal:Q59ZY4 GeneID:3643337
            KEGG:cal:CaO19.7207 Uniprot:Q59ZY4
        Length = 811

 Score = 186 (70.5 bits), Expect = 2.8e-14, Sum P(2) = 2.8e-14
 Identities = 46/125 (36%), Positives = 66/125 (52%)

Query:    86 GGYLRSKIKCLKCLGKSELYERMMDLTVEIDGDIG-----TLEEALAQFTASEILVGENK 140
             G YL S++KCL+C   S  Y     L++ I   +      +L+E L +F  +E+L   NK
Sbjct:   593 GQYL-SQLKCLECGFTSTTYNAFSILSLPIPEKLNKSMKVSLDECLQEFVTTELLDDNNK 651

Query:   141 YYCSRCKSYEKAKKKLTVLEEPNILTIVLKRFE---SGNFGKLNKSVWFP--EVLNMAPY 195
             +YC  CK + K+ KK+ +   P +L I  KRF+   SG F KL   V +P  E L+M PY
Sbjct:   652 WYCPNCKKFTKSTKKIAITRLPQVLIINFKRFKMTASGGFHKLETFVTYPVNEELDMTPY 711

Query:   196 MSRTG 200
                 G
Sbjct:   712 WPDVG 716

 Score = 77 (32.2 bits), Expect = 2.8e-14, Sum P(2) = 2.8e-14
 Identities = 29/85 (34%), Positives = 38/85 (44%)

Query:   188 EVLNMAPYMSRTGDGSPM-YSLYAVVVHLDVTNATFSGHYVCYVKNSHEE-----WFRID 241
             E+L+  P  S+     P  Y L+ V  H    N T +GHY  YV  S +      W   D
Sbjct:   732 EILSTFPVRSQV---PPFKYKLFGVANHYG--NLT-TGHYTAYVHKSSDSKKARNWCYFD 785

Query:   242 DSTVIPVKLER-VLSEEAYMLLYAR 265
             DS V   K    VL++ AY L + R
Sbjct:   786 DSRVTFNKSPNDVLNKNAYCLFFQR 810


>UNIPROTKB|Q59ZY4 [details] [associations]
            symbol:DOA4 "Ubiquitin carboxyl-terminal hydrolase"
            species:237561 "Candida albicans SC5314" [GO:0071285 "cellular
            response to lithium ion" evidence=IMP] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 CGD:CAL0003741 GO:GO:0008234 Gene3D:3.40.250.10
            InterPro:IPR001763 SUPFAM:SSF52821 GO:GO:0006511 GO:GO:0004221
            GO:GO:0071285 eggNOG:COG5533 EMBL:AACQ01000092 KO:K11839
            RefSeq:XP_715008.1 ProteinModelPortal:Q59ZY4 GeneID:3643337
            KEGG:cal:CaO19.7207 Uniprot:Q59ZY4
        Length = 811

 Score = 186 (70.5 bits), Expect = 2.8e-14, Sum P(2) = 2.8e-14
 Identities = 46/125 (36%), Positives = 66/125 (52%)

Query:    86 GGYLRSKIKCLKCLGKSELYERMMDLTVEIDGDIG-----TLEEALAQFTASEILVGENK 140
             G YL S++KCL+C   S  Y     L++ I   +      +L+E L +F  +E+L   NK
Sbjct:   593 GQYL-SQLKCLECGFTSTTYNAFSILSLPIPEKLNKSMKVSLDECLQEFVTTELLDDNNK 651

Query:   141 YYCSRCKSYEKAKKKLTVLEEPNILTIVLKRFE---SGNFGKLNKSVWFP--EVLNMAPY 195
             +YC  CK + K+ KK+ +   P +L I  KRF+   SG F KL   V +P  E L+M PY
Sbjct:   652 WYCPNCKKFTKSTKKIAITRLPQVLIINFKRFKMTASGGFHKLETFVTYPVNEELDMTPY 711

Query:   196 MSRTG 200
                 G
Sbjct:   712 WPDVG 716

 Score = 77 (32.2 bits), Expect = 2.8e-14, Sum P(2) = 2.8e-14
 Identities = 29/85 (34%), Positives = 38/85 (44%)

Query:   188 EVLNMAPYMSRTGDGSPM-YSLYAVVVHLDVTNATFSGHYVCYVKNSHEE-----WFRID 241
             E+L+  P  S+     P  Y L+ V  H    N T +GHY  YV  S +      W   D
Sbjct:   732 EILSTFPVRSQV---PPFKYKLFGVANHYG--NLT-TGHYTAYVHKSSDSKKARNWCYFD 785

Query:   242 DSTVIPVKLER-VLSEEAYMLLYAR 265
             DS V   K    VL++ AY L + R
Sbjct:   786 DSRVTFNKSPNDVLNKNAYCLFFQR 810


>MGI|MGI:1921362 [details] [associations]
            symbol:Usp16 "ubiquitin specific peptidase 16" species:10090
            "Mus musculus" [GO:0003713 "transcription coactivator activity"
            evidence=ISO] [GO:0004197 "cysteine-type endopeptidase activity"
            evidence=ISO] [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=ISO] [GO:0004843 "ubiquitin-specific protease activity"
            evidence=ISO] [GO:0005634 "nucleus" evidence=ISO] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0006508 "proteolysis" evidence=IEA] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA]
            [GO:0006974 "response to DNA damage stimulus" evidence=ISO]
            [GO:0007049 "cell cycle" evidence=IEA] [GO:0007067 "mitosis"
            evidence=ISO] [GO:0008233 "peptidase activity" evidence=IEA]
            [GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
            [GO:0008270 "zinc ion binding" evidence=ISO] [GO:0016568 "chromatin
            modification" evidence=IEA] [GO:0016578 "histone deubiquitination"
            evidence=ISO] [GO:0016787 "hydrolase activity" evidence=IEA]
            [GO:0042393 "histone binding" evidence=ISO] [GO:0043130 "ubiquitin
            binding" evidence=ISO] [GO:0045893 "positive regulation of
            transcription, DNA-dependent" evidence=ISO] [GO:0045901 "positive
            regulation of translational elongation" evidence=ISO] [GO:0046872
            "metal ion binding" evidence=IEA] [GO:0051289 "protein
            homotetramerization" evidence=ISO] [GO:0051301 "cell division"
            evidence=IEA] [GO:0070537 "histone H2A K63-linked deubiquitination"
            evidence=ISO] InterPro:IPR001394 InterPro:IPR001607
            InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271 MGI:MGI:1921362
            GO:GO:0005634 GO:GO:0045893 GO:GO:0051301 GO:GO:0007067
            GO:GO:0046872 GO:GO:0008270 GO:GO:0006351 GO:GO:0006974
            GO:GO:0003713 GO:GO:0051289 Gene3D:3.30.40.10 InterPro:IPR013083
            GO:GO:0006511 GO:GO:0042393 GO:GO:0043130 GO:GO:0004197
            GO:GO:0004843 GO:GO:0004221 GO:GO:0070537 GO:GO:0045901 HSSP:P40818
            eggNOG:COG5207 CTD:10600 HOGENOM:HOG000154755 HOVERGEN:HBG062704
            KO:K11844 OrthoDB:EOG495ZRD EMBL:AK160038 EMBL:BC003278
            EMBL:BC004577 IPI:IPI00116875 RefSeq:NP_077220.2 UniGene:Mm.152941
            ProteinModelPortal:Q99LG0 SMR:Q99LG0 STRING:Q99LG0 MEROPS:C19.050
            PhosphoSite:Q99LG0 PaxDb:Q99LG0 PRIDE:Q99LG0 GeneID:74112
            KEGG:mmu:74112 UCSC:uc007zuk.2 InParanoid:Q99LG0 NextBio:339808
            Genevestigator:Q99LG0 Uniprot:Q99LG0
        Length = 825

 Score = 147 (56.8 bits), Expect = 3.2e-14, Sum P(5) = 3.2e-14
 Identities = 36/91 (39%), Positives = 51/91 (56%)

Query:   149 YEKAKKKLTVLEEPNILTIVLKRFESGNFG--KLNKSVWFPEVLNMAPYMS----RTGDG 202
             Y  AKK++ V   P +LT+ LKRF+   F   K+NK + FPE+L++AP+ +       + 
Sbjct:   678 YTNAKKQMLVSLAPPVLTLHLKRFQQAGFNLRKVNKHIKFPEILDLAPFCTLKCKNVAEE 737

Query:   203 SP--MYSLYAVVVHLDVTNATFSGHYVCYVK 231
             S   +YSLY VV H   +    SGHY  Y K
Sbjct:   738 STRVLYSLYGVVEH---SGTMRSGHYTAYAK 765

 Score = 81 (33.6 bits), Expect = 3.2e-14, Sum P(5) = 3.2e-14
 Identities = 14/38 (36%), Positives = 25/38 (65%)

Query:   228 CYVKNSHEEWFRIDDSTVIPVKLERVLSEEAYMLLYAR 265
             C ++++  +WF I D+ V  V + +VL+ +AY+L Y R
Sbjct:   786 CEMESTKGQWFHISDTHVQAVPITKVLNSQAYLLFYER 823

 Score = 59 (25.8 bits), Expect = 3.2e-14, Sum P(5) = 3.2e-14
 Identities = 13/34 (38%), Positives = 20/34 (58%)

Query:    85 FGGYLRSKIKCLKCLGKSELYERMMDLTVEIDGD 118
             FGG L S I C +C   S ++E  +DL++ +  D
Sbjct:   358 FGGELTSTIMCDECRTVSLVHESFLDLSLPVLDD 391

 Score = 49 (22.3 bits), Expect = 3.2e-14, Sum P(5) = 3.2e-14
 Identities = 10/26 (38%), Positives = 14/26 (53%)

Query:   121 TLEEALAQFTASEILVGENKYYCSRC 146
             +++  L QFT +E L   NK  C  C
Sbjct:   633 SIQHCLYQFTRNEKLQDANKLLCEVC 658

 Score = 45 (20.9 bits), Expect = 3.2e-14, Sum P(5) = 3.2e-14
 Identities = 10/38 (26%), Positives = 22/38 (57%)

Query:    25 VSPIGILSKIQKIGSHLGHGREEDAHEFLRCAVDTMQS 62
             V+P  + S++ K  +     +++D+ E LR  +D M++
Sbjct:   275 VTPKELFSQVCKKATRFKGYQQQDSQELLRYLLDGMRA 312


>ZFIN|ZDB-GENE-060518-5 [details] [associations]
            symbol:usp40 "ubiquitin specific peptidase 40"
            species:7955 "Danio rerio" [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] [GO:0016787 "hydrolase
            activity" evidence=IEA] [GO:0008234 "cysteine-type peptidase
            activity" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
            [GO:0008233 "peptidase activity" evidence=IEA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 ZFIN:ZDB-GENE-060518-5 GO:GO:0008234 GO:GO:0006511
            GO:GO:0004221 GeneTree:ENSGT00630000089581 CTD:55230 KO:K11869
            EMBL:CR388009 EMBL:CU571254 IPI:IPI00897692 RefSeq:XP_001921353.3
            UniGene:Dr.80435 Ensembl:ENSDART00000105098 GeneID:402834
            KEGG:dre:402834 NextBio:20816662 Bgee:F1Q7D2 Uniprot:F1Q7D2
        Length = 1263

 Score = 198 (74.8 bits), Expect = 4.2e-14, Sum P(3) = 4.2e-14
 Identities = 57/184 (30%), Positives = 89/184 (48%)

Query:    78 TTLIGLTFGGYLRSKIKCLKCLGKSELYERMMDLTVEIDGDIGTLEEAL-AQFTASEILV 136
             ++LI   + G L ++I C +C   SE  E  +DLTV + G  G LEEAL   F   E+  
Sbjct:   152 SSLIHRLYHGTLVNQITCKECSYISERQEDFLDLTVSVSGVSG-LEEALWNMFVEEEMFE 210

Query:   137 GENKYYCSRCKSYEKAKKKLTVLEEPNILTIVLKRFESGNFGKLNK-----SVWFPEVLN 191
             G N Y CS C    +A K   + + P  LTI L RF   +F K  +     S  FP   N
Sbjct:   211 GNNLYRCSGCGQLVRAAKSAKLRKLPPFLTISLLRFNF-DFTKCERYKETGSYVFPLTFN 269

Query:   192 MAPYMSRTG--DGSPMYSLYAVVVHLDVTNATFSGHYVCYVKNSHE--EWFRIDDSTVIP 247
             + P+  ++   D    Y L++V++H       + GHY  Y+K+  +   W   ++   + 
Sbjct:   270 LRPFCEQSNWPDSEYSYELFSVIIH---KGGCYGGHYHVYIKDIDQLGHWEAPEEEKNVK 326

Query:   248 VKLE 251
             +K++
Sbjct:   327 MKVK 330

 Score = 72 (30.4 bits), Expect = 4.2e-14, Sum P(3) = 4.2e-14
 Identities = 21/46 (45%), Positives = 27/46 (58%)

Query:   237 WFRIDDSTV--IPVK-LERVLS--EEAYMLLYARHS-PRPPALIRN 276
             WF ++DSTV  I VK +E+     E AYML Y + +  RPP  I N
Sbjct:   464 WFDLNDSTVTAITVKDIEKQFQGKESAYMLFYRKTTLKRPPEAIGN 509

 Score = 38 (18.4 bits), Expect = 4.2e-14, Sum P(3) = 4.2e-14
 Identities = 15/64 (23%), Positives = 21/64 (32%)

Query:   423 GRDGNPAILFTESTKQYRNLGHQYVSNGSSRDIDS--DRVGWANPSDVRLRRANGDYRSA 480
             GRDG+P  L+      Y       +      D  S      W      R ++   +   A
Sbjct:  1121 GRDGSPKGLYAALAAHYGLAPDNLLLAKHLPDKHSWMPISNWTQQVSKRKKKRKAESLQA 1180

Query:   481 QPFY 484
              PFY
Sbjct:  1181 APFY 1184


>TAIR|locus:2114653 [details] [associations]
            symbol:UBP26 "ubiquitin-specific protease 26"
            species:3702 "Arabidopsis thaliana" [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] [GO:0004843
            "ubiquitin-specific protease activity" evidence=ISS] [GO:0005634
            "nucleus" evidence=ISM] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0005730 "nucleolus"
            evidence=IDA] [GO:0048316 "seed development" evidence=RCA;IMP]
            [GO:0007062 "sister chromatid cohesion" evidence=RCA] [GO:0009640
            "photomorphogenesis" evidence=RCA] [GO:0009790 "embryo development"
            evidence=RCA] [GO:0009793 "embryo development ending in seed
            dormancy" evidence=RCA] [GO:0009845 "seed germination"
            evidence=RCA] [GO:0009880 "embryonic pattern specification"
            evidence=RCA] [GO:0009909 "regulation of flower development"
            evidence=RCA] [GO:0009933 "meristem structural organization"
            evidence=RCA] [GO:0010072 "primary shoot apical meristem
            specification" evidence=RCA] [GO:0010162 "seed dormancy process"
            evidence=RCA] [GO:0010182 "sugar mediated signaling pathway"
            evidence=RCA] [GO:0010228 "vegetative to reproductive phase
            transition of meristem" evidence=RCA] [GO:0010431 "seed maturation"
            evidence=RCA] [GO:0010564 "regulation of cell cycle process"
            evidence=RCA] [GO:0016567 "protein ubiquitination" evidence=RCA]
            [GO:0019915 "lipid storage" evidence=RCA] [GO:0045595 "regulation
            of cell differentiation" evidence=RCA] [GO:0048366 "leaf
            development" evidence=RCA] [GO:0048825 "cotyledon development"
            evidence=RCA] [GO:0050826 "response to freezing" evidence=RCA]
            [GO:0051301 "cell division" evidence=RCA] InterPro:IPR001394
            InterPro:IPR006615 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS51283 SMART:SM00695
            Prosite:PS00299 EMBL:CP002686 GenomeReviews:BA000014_GR
            GO:GO:0005730 GO:GO:0008234 GO:GO:0048316 GO:GO:0006511
            InterPro:IPR019955 PROSITE:PS50053 GO:GO:0004221 eggNOG:COG5077
            EMBL:AL132964 HSSP:P54578 EMBL:AF302674 IPI:IPI00546690 PIR:T46237
            RefSeq:NP_566922.1 UniGene:At.22294 ProteinModelPortal:Q9SCJ9
            SMR:Q9SCJ9 STRING:Q9SCJ9 MEROPS:C19.068 PaxDb:Q9SCJ9 PRIDE:Q9SCJ9
            EnsemblPlants:AT3G49600.1 GeneID:824122 KEGG:ath:AT3G49600
            TAIR:At3g49600 HOGENOM:HOG000090485 InParanoid:Q9SCJ9 KO:K11858
            OMA:EECIGER Genevestigator:Q9SCJ9 Uniprot:Q9SCJ9
        Length = 1067

 Score = 224 (83.9 bits), Expect = 4.4e-14, Sum P(3) = 4.4e-14
 Identities = 63/213 (29%), Positives = 105/213 (49%)

Query:    41 LGHGREEDAHEFLRCAVDTMQSVCLKEFGAKGKIAEETTLIGLTFGGYLRSKIKCLKCLG 100
             L +G ++D HEFL   +  ++  CL   G K K     T++   F G +     C KC  
Sbjct:   177 LDNGVQQDTHEFLTLLLSLLER-CLLHSGVKAK-----TIVQDLFSGSVSHVTTCSKCGR 230

Query:   101 KSELYERMMD---LTVEIDGDIGTLEEALAQFTASEILVGENKYYCSRCKSYEKAKKKLT 157
              SE   +M D   L + + G + +L+ +L  + + E L G+N+Y+C  C +   A + + 
Sbjct:   231 DSEASSKMEDFYALELNVKG-LKSLDASLNDYLSLEQLNGDNQYFCGSCNARVDATRCIK 289

Query:   158 VLEEPNILTIVLKR--F--ESGNFGKLNKSVWFPEVLNMAPYMSRTGDGSPMYSLYAVVV 213
             +   P ++T  LKR  F  ++    K+  S  FP+VL+M   ++ +      Y L AV++
Sbjct:   290 LRTLPPVITFQLKRCIFLPKTTAKKKITSSFSFPQVLDMGSRLAESSQNKLTYDLSAVLI 349

Query:   214 HLDVTNATFSGHYVCYVKNSHEE-WFRIDDSTV 245
             H    +A  SGHYV ++K+     W+  DD  V
Sbjct:   350 HKG--SAVNSGHYVAHIKDEKTGLWWEFDDEHV 380

 Score = 41 (19.5 bits), Expect = 4.4e-14, Sum P(3) = 4.4e-14
 Identities = 8/17 (47%), Positives = 12/17 (70%)

Query:   248 VKLERVLSEEAYMLLYA 264
             +K E   S +AYML+Y+
Sbjct:   424 IKSEVFSSSDAYMLMYS 440

 Score = 37 (18.1 bits), Expect = 4.4e-14, Sum P(3) = 4.4e-14
 Identities = 6/19 (31%), Positives = 10/19 (52%)

Query:   314 QQKPCTDSNQLFDRDEWKF 332
             Q+ P TD   +    +WK+
Sbjct:   826 QKNPSTDKLTIIPELDWKY 844


>RGD|1307192 [details] [associations]
            symbol:Usp16 "ubiquitin specific peptidase 16" species:10116
            "Rattus norvegicus" [GO:0003713 "transcription coactivator
            activity" evidence=ISO;ISS] [GO:0004197 "cysteine-type
            endopeptidase activity" evidence=ISO;ISS] [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=ISO;ISS] [GO:0004843
            "ubiquitin-specific protease activity" evidence=ISO;ISS]
            [GO:0005634 "nucleus" evidence=ISO;ISS] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0006511 "ubiquitin-dependent
            protein catabolic process" evidence=IEA] [GO:0006974 "response to
            DNA damage stimulus" evidence=ISO;ISS] [GO:0007067 "mitosis"
            evidence=ISO;ISS] [GO:0008270 "zinc ion binding" evidence=ISO;ISS]
            [GO:0016578 "histone deubiquitination" evidence=ISO;ISS]
            [GO:0042393 "histone binding" evidence=ISO;ISS] [GO:0043130
            "ubiquitin binding" evidence=ISO;ISS] [GO:0045893 "positive
            regulation of transcription, DNA-dependent" evidence=ISO;ISS]
            [GO:0045901 "positive regulation of translational elongation"
            evidence=ISO;ISS] [GO:0051289 "protein homotetramerization"
            evidence=ISO;ISS] [GO:0051301 "cell division" evidence=IEA]
            [GO:0070537 "histone H2A K63-linked deubiquitination"
            evidence=ISO;ISS] InterPro:IPR001394 InterPro:IPR001607
            InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271 RGD:1307192
            GO:GO:0005634 GO:GO:0045893 GO:GO:0051301 GO:GO:0007067
            GO:GO:0046872 GO:GO:0008270 GO:GO:0006351 GO:GO:0006974
            GO:GO:0003713 GO:GO:0051289 Gene3D:3.30.40.10 InterPro:IPR013083
            GO:GO:0006511 GO:GO:0042393 GO:GO:0043130 GO:GO:0004197
            GO:GO:0004843 GO:GO:0004221 GO:GO:0070537 GO:GO:0045901 HSSP:P40818
            eggNOG:COG5207 CTD:10600 HOGENOM:HOG000154755 HOVERGEN:HBG062704
            KO:K11844 OrthoDB:EOG495ZRD GeneTree:ENSGT00690000102047
            OMA:CKNVAEE MEROPS:C19.050 EMBL:CH473989 EMBL:BC112386
            IPI:IPI00190797 IPI:IPI00923707 RefSeq:NP_001093971.1
            UniGene:Rn.55800 PRIDE:Q2KJ09 Ensembl:ENSRNOT00000002173
            GeneID:288306 KEGG:rno:288306 UCSC:RGD:1307192 InParanoid:Q2KJ09
            NextBio:627930 Genevestigator:Q2KJ09 Uniprot:Q2KJ09
        Length = 826

 Score = 147 (56.8 bits), Expect = 5.1e-14, Sum P(5) = 5.1e-14
 Identities = 36/91 (39%), Positives = 51/91 (56%)

Query:   149 YEKAKKKLTVLEEPNILTIVLKRFESGNFG--KLNKSVWFPEVLNMAPYMS----RTGDG 202
             Y  AKK++ V   P +LT+ LKRF+   F   K+NK + FPE+L++AP+ +       + 
Sbjct:   679 YTNAKKQMLVSLAPPVLTLHLKRFQQAGFNLRKVNKHIKFPEILDLAPFCTLKCKNVAEE 738

Query:   203 SP--MYSLYAVVVHLDVTNATFSGHYVCYVK 231
             S   +YSLY VV H   +    SGHY  Y K
Sbjct:   739 STRVLYSLYGVVEH---SGTMRSGHYTAYAK 766

 Score = 81 (33.6 bits), Expect = 5.1e-14, Sum P(5) = 5.1e-14
 Identities = 14/38 (36%), Positives = 25/38 (65%)

Query:   228 CYVKNSHEEWFRIDDSTVIPVKLERVLSEEAYMLLYAR 265
             C ++++  +WF I D+ V  V + +VL+ +AY+L Y R
Sbjct:   787 CEMESTKGQWFHISDTHVQAVPITKVLNSQAYLLFYER 824

 Score = 57 (25.1 bits), Expect = 5.1e-14, Sum P(5) = 5.1e-14
 Identities = 13/34 (38%), Positives = 19/34 (55%)

Query:    85 FGGYLRSKIKCLKCLGKSELYERMMDLTVEIDGD 118
             FGG L S I C  C   S ++E  +DL++ +  D
Sbjct:   358 FGGELTSTIMCDDCRTVSLVHESFLDLSLPVLDD 391

 Score = 49 (22.3 bits), Expect = 5.1e-14, Sum P(5) = 5.1e-14
 Identities = 10/26 (38%), Positives = 14/26 (53%)

Query:   121 TLEEALAQFTASEILVGENKYYCSRC 146
             +++  L QFT +E L   NK  C  C
Sbjct:   634 SIQHCLYQFTRNEKLQDANKLLCEVC 659

 Score = 45 (20.9 bits), Expect = 5.1e-14, Sum P(5) = 5.1e-14
 Identities = 10/38 (26%), Positives = 22/38 (57%)

Query:    25 VSPIGILSKIQKIGSHLGHGREEDAHEFLRCAVDTMQS 62
             V+P  + S++ K  +     +++D+ E LR  +D M++
Sbjct:   275 VTPKELFSQVCKKATRFKGYQQQDSQELLRYLLDGMRA 312


>CGD|CAL0004185 [details] [associations]
            symbol:DOT4 species:5476 "Candida albicans" [GO:0030446
            "hyphal cell wall" evidence=IDA] [GO:0009986 "cell surface"
            evidence=IDA] [GO:0005634 "nucleus" evidence=IEA] [GO:0004843
            "ubiquitin-specific protease activity" evidence=IEA] [GO:0016579
            "protein deubiquitination" evidence=IEA] [GO:0006348 "chromatin
            silencing at telomere" evidence=IEA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00973 PROSITE:PS50235
            CGD:CAL0004185 GO:GO:0009986 GO:GO:0006511 GO:GO:0030446
            GO:GO:0004221 EMBL:AACQ01000191 eggNOG:COG5560 KO:K11873
            RefSeq:XP_711590.1 ProteinModelPortal:Q59PG8 STRING:Q59PG8
            GeneID:3646810 KEGG:cal:CaO19.3370 Uniprot:Q59PG8
        Length = 735

 Score = 161 (61.7 bits), Expect = 5.2e-14, Sum P(2) = 5.2e-14
 Identities = 46/159 (28%), Positives = 87/159 (54%)

Query:   121 TLEEALAQFTASEILV-GENK----YYCSRCKSYEKAKKKLTVLEEPNILTIVLKRFESG 175
             ++E+++  F ++E++   EN     Y+C +C  +  A K  ++   P  LTI  KRF+  
Sbjct:   582 SVEKSINDFFSNEVIKKSENDSKSGYFCEKCNRFTHANKISSIEIAPETLTIHFKRFKFN 641

Query:   176 N--FGKLNKSVWFPEVLNMAPYMSRTGDGSPMYSLYAVVVHLDVTNATFSGHYVCY-VKN 232
             N    K+ +S+ + + L+++ YM +   G+  Y L +V+VH     +  SGHYV + ++ 
Sbjct:   642 NNSSSKVKQSINYSKYLDLSKYMVQ---GTAKYRLTSVIVHEG--RSISSGHYVAHCLQP 696

Query:   233 SHEEWFRIDDSTVIPVKLERV-LSE-EAYMLLYARHSPR 269
                 W   DD  +  ++ ERV L++  AY+L+Y + +P+
Sbjct:   697 DGYTWCTYDDEYINKIE-ERVALNDPSAYVLVYTKLTPK 734

 Score = 100 (40.3 bits), Expect = 5.2e-14, Sum P(2) = 5.2e-14
 Identities = 23/92 (25%), Positives = 47/92 (51%)

Query:    25 VSPIGILSKIQKIGSHLGHGREEDAHEFLRCAVDTMQSVCLKEFGAKGKIAEETTLIGLT 84
             ++P  I+ ++ +I   +   ++ED+HE+    +  +Q    ++   KGK   E+ +  + 
Sbjct:   454 INPKKIIQRLDEINCMMSEWQQEDSHEYYMSLISRLQ----EDSTPKGKKLNESIIYDI- 508

Query:    85 FGGYLRSKIKCLKCLGKSELYERMMDLTVEID 116
             FGG L  +I C KC   S   +   DL++ ++
Sbjct:   509 FGGLLNQRITCHKCHNVSITKQEFYDLSLGLN 540


>UNIPROTKB|Q59PG8 [details] [associations]
            symbol:DOT4 "Putative uncharacterized protein UBP10"
            species:237561 "Candida albicans SC5314" [GO:0009986 "cell surface"
            evidence=IDA] [GO:0030446 "hyphal cell wall" evidence=IDA]
            InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00973
            PROSITE:PS50235 CGD:CAL0004185 GO:GO:0009986 GO:GO:0006511
            GO:GO:0030446 GO:GO:0004221 EMBL:AACQ01000191 eggNOG:COG5560
            KO:K11873 RefSeq:XP_711590.1 ProteinModelPortal:Q59PG8
            STRING:Q59PG8 GeneID:3646810 KEGG:cal:CaO19.3370 Uniprot:Q59PG8
        Length = 735

 Score = 161 (61.7 bits), Expect = 5.2e-14, Sum P(2) = 5.2e-14
 Identities = 46/159 (28%), Positives = 87/159 (54%)

Query:   121 TLEEALAQFTASEILV-GENK----YYCSRCKSYEKAKKKLTVLEEPNILTIVLKRFESG 175
             ++E+++  F ++E++   EN     Y+C +C  +  A K  ++   P  LTI  KRF+  
Sbjct:   582 SVEKSINDFFSNEVIKKSENDSKSGYFCEKCNRFTHANKISSIEIAPETLTIHFKRFKFN 641

Query:   176 N--FGKLNKSVWFPEVLNMAPYMSRTGDGSPMYSLYAVVVHLDVTNATFSGHYVCY-VKN 232
             N    K+ +S+ + + L+++ YM +   G+  Y L +V+VH     +  SGHYV + ++ 
Sbjct:   642 NNSSSKVKQSINYSKYLDLSKYMVQ---GTAKYRLTSVIVHEG--RSISSGHYVAHCLQP 696

Query:   233 SHEEWFRIDDSTVIPVKLERV-LSE-EAYMLLYARHSPR 269
                 W   DD  +  ++ ERV L++  AY+L+Y + +P+
Sbjct:   697 DGYTWCTYDDEYINKIE-ERVALNDPSAYVLVYTKLTPK 734

 Score = 100 (40.3 bits), Expect = 5.2e-14, Sum P(2) = 5.2e-14
 Identities = 23/92 (25%), Positives = 47/92 (51%)

Query:    25 VSPIGILSKIQKIGSHLGHGREEDAHEFLRCAVDTMQSVCLKEFGAKGKIAEETTLIGLT 84
             ++P  I+ ++ +I   +   ++ED+HE+    +  +Q    ++   KGK   E+ +  + 
Sbjct:   454 INPKKIIQRLDEINCMMSEWQQEDSHEYYMSLISRLQ----EDSTPKGKKLNESIIYDI- 508

Query:    85 FGGYLRSKIKCLKCLGKSELYERMMDLTVEID 116
             FGG L  +I C KC   S   +   DL++ ++
Sbjct:   509 FGGLLNQRITCHKCHNVSITKQEFYDLSLGLN 540


>UNIPROTKB|G4N7R8 [details] [associations]
            symbol:MGG_03527 "Uncharacterized protein" species:242507
            "Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
            evidence=ND] InterPro:IPR001394 InterPro:IPR001607
            InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS00973
            PROSITE:PS50235 PROSITE:PS50271 GO:GO:0046872 GO:GO:0008270
            GO:GO:0008234 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511
            EMBL:CM001234 GO:GO:0004221 KO:K11366 RefSeq:XP_003716392.1
            EnsemblFungi:MGG_03527T0 GeneID:2676992 KEGG:mgr:MGG_03527
            Uniprot:G4N7R8
        Length = 518

 Score = 209 (78.6 bits), Expect = 6.3e-14, P = 6.3e-14
 Identities = 79/270 (29%), Positives = 126/270 (46%)

Query:    29 GILSKIQKIGSHLGHGREEDAHEFLRCAVDTMQSVC----LKEFGAKGKIAEETTLIGLT 84
             G  S  +K  ++L   +E+DAHEF +   + +          E G++  + +   +I  T
Sbjct:   251 GFWSLERKAFANLVTTKEQDAHEFFQLLAEELHERNGDGKRPESGSE-HLCD--CIIHQT 307

Query:    85 FGGYLRSKIKCLKCLGKSELYERMMDLTVEIDGD------IGTLEE------ALA-QFTA 131
             + G L+S   C  C   +   +  +DL++ +D         GT  E      +L+ Q   
Sbjct:   308 YYGKLQSNTTCQGCGSVTNQVQSFLDLSLGLDSTQKKKKLAGTKSEGGSKGASLSLQDCL 367

Query:   132 SEILVGENK--YYCSRCKSYEKAKKKLTVLEEPNILTIVLKRFE--SGNFGKLNK---SV 184
              E  V  +K  Y C++C S ++A++  ++   PN+L+I LKRFE   G   K  K    V
Sbjct:   368 EEEYVKSDKCEYRCNKCSSTQQARRNTSLKRLPNVLSIQLKRFEYKQGRHDKAVKVDTPV 427

Query:   185 WFPEVLNMAPYMSRTGDGSP-----------MYSLYAVVVHLDVTNATFSGHYVCYVKNS 233
              FP  LNM PY  R G  +             Y L++VV H+   +   +GHY CY K  
Sbjct:   428 KFPLQLNMFPYTDR-GPSTESKENYELARTCQYDLFSVVEHVGEID---TGHYTCYCK-V 482

Query:   234 HEEWFRIDDSTVIPVKLERVLSEEAYMLLY 263
              ++WF  +D  V    + +VLS +AY+L Y
Sbjct:   483 QDQWFAFNDHRVEMASVSQVLSAKAYLLFY 512


>ASPGD|ASPL0000007671 [details] [associations]
            symbol:AN6354 species:162425 "Emericella nidulans"
            [GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol"
            evidence=IEA] [GO:0004843 "ubiquitin-specific protease activity"
            evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
            process" evidence=IEA] [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0016579 "protein deubiquitination"
            evidence=IEA] InterPro:IPR001394 InterPro:IPR006615
            InterPro:IPR018200 Pfam:PF00443 Pfam:PF06337 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS51283 SMART:SM00695
            GO:GO:0008234 EMBL:AACD01000107 EMBL:BN001301 GO:GO:0006511
            GO:GO:0004221 eggNOG:COG5560 KO:K11835 OrthoDB:EOG4FR40X
            RefSeq:XP_663958.1 ProteinModelPortal:Q5AZC6
            EnsemblFungi:CADANIAT00006630 GeneID:2871251 KEGG:ani:AN6354.2
            HOGENOM:HOG000166458 OMA:CVRSVEE Uniprot:Q5AZC6
        Length = 1418

 Score = 221 (82.9 bits), Expect = 6.4e-14, Sum P(2) = 6.4e-14
 Identities = 57/156 (36%), Positives = 83/156 (53%)

Query:   121 TLEEALAQFTASEILVGENKYYCSRCKSYEKAKKKLTVLEEPNILTIVLKRFES--GNFG 178
             TL E L +F   EIL   + +YC RCK + +A+KK  + + P+IL + LKRF +  G   
Sbjct:  1041 TLNECLDEFNKEEILSENDAWYCPRCKEHRRARKKFELWKTPDILVMHLKRFSASRGFRD 1100

Query:   179 KLNKSVWFP-EVLNMAPYMSRTGDG-SPMYSLYAVVVHLDVTNATFSGHYVCYVKNSHE- 235
             KL+  V FP E L++   +    +G S +Y L+AV  H         GHY  Y KN    
Sbjct:  1101 KLDVMVDFPVEGLDLTGRVEAPEEGKSLVYDLFAVDNHY---GGLGGGHYTAYAKNFMTG 1157

Query:   236 EWFRIDDSTVI-PVKLERVLSEEAYMLLYARHSPRP 270
             +W   +DS+V  P+  +  ++  AY+L Y R S RP
Sbjct:  1158 QWNEYNDSSVSRPIDPQNAVTSSAYLLFYRRRSDRP 1193

 Score = 42 (19.8 bits), Expect = 6.4e-14, Sum P(2) = 6.4e-14
 Identities = 14/45 (31%), Positives = 26/45 (57%)

Query:    18 AKDGSYPVSPIGILSKIQKIG-SHLGHGREEDAHEFLRCAVDTMQ 61
             A  GS+  +P  + + I + G +  G+G ++D+ EFL   +D +Q
Sbjct:   524 AGHGSF--APRQLKNTIGRYGPAFSGYG-QQDSQEFLLFLLDGLQ 565

WARNING:  HSPs involving 287 database sequences were not reported due to the
          limiting value of parameter B = 250.


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.316   0.133   0.398    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      484       455   0.00094  118 3  11 22  0.43    34
                                                     35  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  537
  No. of states in DFA:  621 (66 KB)
  Total size of DFA:  293 KB (2152 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  39.53u 0.09s 39.62t   Elapsed:  00:00:01
  Total cpu time:  39.58u 0.09s 39.67t   Elapsed:  00:00:01
  Start:  Sat May 11 06:12:25 2013   End:  Sat May 11 06:12:26 2013
WARNINGS ISSUED:  2
the Gene Ontology

BLAST Results

Query Summary

Query Sequence

High Scoring Gene Products

Raw Blast Data


Symbol, full name	Information	P value
BLAST match view associations BLAST with UBP17 UBP17 UBP17 AT5G65450	protein from Arabidopsis thaliana	4.5e-98
BLAST match view associations BLAST with UBP16 UBP16 UBP16 AT4G24560	protein from Arabidopsis thaliana	1.8e-87
BLAST match view associations BLAST with UBP19 UBP19 UBP19 AT2G24640	protein from Arabidopsis thaliana	3.5e-75
BLAST match view associations BLAST with UBP18 UBP18 UBP18 AT4G31670	protein from Arabidopsis thaliana	1.2e-74
BLAST match view associations BLAST with DDB_G0274827 DDB_G0274827 DDB_G0274827 putative ubiquitin carboxyl-terminal hydrolase (UCH)	gene from Dictyostelium discoideum	5.3e-51
BLAST match view associations BLAST with usp42 usp42 usp42 ubiquitin specific peptidase 42	gene_product from Danio rerio	8.7e-50
BLAST match view associations BLAST with Usp42 Usp42 Usp42 ubiquitin specific peptidase 42	protein from Mus musculus	2.8e-49
BLAST match view associations BLAST with usp36 usp36 usp36 ubiquitin specific peptidase 36	gene_product from Danio rerio	8.0e-49
BLAST match view associations BLAST with Usp36 Usp36 Usp36 ubiquitin specific peptidase 36	protein from Mus musculus	1.4e-48
BLAST match view associations BLAST with USP42 USP42 USP42 Ubiquitin carboxyl-terminal hydrolase	protein from Gallus gallus	2.9e-48
BLAST match view associations BLAST with USP42 USP42 USP42 Ubiquitin carboxyl-terminal hydrolase 42	protein from Homo sapiens	3.7e-48
BLAST match view associations BLAST with Usp36 Usp36 Usp36 ubiquitin specific peptidase 36	gene from Rattus norvegicus	4.9e-48
BLAST match view associations BLAST with USP42 USP42 USP42 Ubiquitin carboxyl-terminal hydrolase	protein from Canis lupus familiaris	7.8e-48
BLAST match view associations BLAST with USP42 USP42 USP42 Ubiquitin carboxyl-terminal hydrolase 42	protein from Bos taurus	7.8e-48
BLAST match view associations BLAST with USP36 USP36 USP36 Ubiquitin carboxyl-terminal hydrolase	protein from Canis lupus familiaris	2.3e-47
BLAST match view associations BLAST with USP42 USP42 USP42 Ubiquitin carboxyl-terminal hydrolase 42	protein from Homo sapiens	4.0e-47
BLAST match view associations BLAST with USP36 USP36 USP36 Ubiquitin carboxyl-terminal hydrolase	protein from Bos taurus	4.6e-47
BLAST match view associations BLAST with USP36 USP36 USP36 Ubiquitin carboxyl-terminal hydrolase 36	protein from Homo sapiens	4.8e-47
BLAST match view associations BLAST with USP42 USP42 USP42 Ubiquitin carboxyl-terminal hydrolase 42	protein from Homo sapiens	7.1e-47
BLAST match view associations BLAST with USP36 USP36 USP36 Ubiquitin carboxyl-terminal hydrolase	protein from Sus scrofa	7.9e-47
BLAST match view associations BLAST with Usp42 Usp42 Usp42 ubiquitin specific peptidase 42	gene from Rattus norvegicus	1.2e-46
BLAST match view associations BLAST with USP17L12 USP17L12 USP17L12 Ubiquitin carboxyl-terminal hydrolase 17-like protein 12	protein from Homo sapiens	3.5e-43
BLAST match view associations BLAST with USP17L21 USP17L21 USP17L21 Ubiquitin carboxyl-terminal hydrolase 17-like protein 21	protein from Homo sapiens	3.5e-43
BLAST match view associations BLAST with USP17L11 USP17L11 USP17L11 Ubiquitin carboxyl-terminal hydrolase 17-like protein 11	protein from Homo sapiens	4.5e-43
BLAST match view associations BLAST with USP17L19 USP17L19 USP17L19 Ubiquitin carboxyl-terminal hydrolase 17-like protein 19	protein from Homo sapiens	4.5e-43
BLAST match view associations BLAST with USP17L10 USP17L10 USP17L10 Ubiquitin carboxyl-terminal hydrolase 17-like protein 10	protein from Homo sapiens	9.3e-43
BLAST match view associations BLAST with USP17L13 USP17L13 USP17L13 Ubiquitin carboxyl-terminal hydrolase 17-like protein 13	protein from Homo sapiens	1.2e-42
BLAST match view associations BLAST with USP17L18 USP17L18 USP17L18 Ubiquitin carboxyl-terminal hydrolase 17-like protein 18	protein from Homo sapiens	1.2e-42
BLAST match view associations BLAST with USP17L17 USP17L17 USP17L17 Ubiquitin carboxyl-terminal hydrolase 17-like protein 17	protein from Homo sapiens	1.2e-42
BLAST match view associations BLAST with USP17L13 USP17L13 USP17L13 Ubiquitin carboxyl-terminal hydrolase	protein from Homo sapiens	1.2e-42
BLAST match view associations BLAST with USP17L5 USP17L5 USP17L5 Ubiquitin carboxyl-terminal hydrolase 17-like protein 5	protein from Homo sapiens	1.9e-42
BLAST match view associations BLAST with USP17L15 USP17L15 USP17L15 Ubiquitin carboxyl-terminal hydrolase 17-like protein 15	protein from Homo sapiens	1.9e-42
BLAST match view associations BLAST with USP17L22 USP17L22 USP17L22 Ubiquitin carboxyl-terminal hydrolase 17-like protein 22	protein from Homo sapiens	1.9e-42
BLAST match view associations BLAST with USP17L20 USP17L20 USP17L20 Ubiquitin carboxyl-terminal hydrolase 17-like protein 20	protein from Homo sapiens	1.9e-42
BLAST match view associations BLAST with USP17L24 USP17L24 USP17L24 Ubiquitin carboxyl-terminal hydrolase 17-like protein 24	protein from Homo sapiens	1.9e-42
BLAST match view associations BLAST with USP17L2 USP17L2 USP17L2 Ubiquitin carboxyl-terminal hydrolase 17	protein from Homo sapiens	2.5e-42
BLAST match view associations BLAST with USP17L6 USP17L6 USP17L6 Ubiquitin carboxyl-terminal hydrolase 17-like protein 6	protein from Homo sapiens	3.6e-41
BLAST match view associations BLAST with LOC609437 LOC609437 LOC609437 Ubiquitin carboxyl-terminal hydrolase	protein from Canis lupus familiaris	9.6e-41
BLAST match view associations BLAST with USP17L3 USP17L3 USP17L3 Ubiquitin carboxyl-terminal hydrolase 17-like protein 3	protein from Homo sapiens	1.2e-40
BLAST match view associations BLAST with USP17L4 USP17L4 USP17L4 Inactive ubiquitin carboxyl-terminal hydrolase 17-like protein 4	protein from Homo sapiens	1.6e-40
BLAST match view associations BLAST with USP17L8 USP17L8 USP17L8 Inactive ubiquitin carboxyl-terminal hydrolase 17-like protein 8	protein from Homo sapiens	2.0e-40
BLAST match view associations BLAST with UBP25 UBP25 UBP25 AT3G14400	protein from Arabidopsis thaliana	3.6e-40
BLAST match view associations BLAST with USP17L1P USP17L1P USP17L1P Putative ubiquitin carboxyl-terminal hydrolase 17-like protein 1	protein from Homo sapiens	5.3e-40
BLAST match view associations BLAST with Usp17la Usp17la Usp17la ubiquitin specific peptidase 17-like A	protein from Mus musculus	6.8e-40
BLAST match view associations BLAST with LOC609268 LOC609268 LOC609268 Ubiquitin carboxyl-terminal hydrolase	protein from Canis lupus familiaris	1.4e-39
BLAST match view associations BLAST with USP17L7 USP17L7 USP17L7 Inactive ubiquitin carboxyl-terminal hydrolase 17-like protein 7	protein from Homo sapiens	1.8e-39
BLAST match view associations BLAST with Usp17l5 Usp17l5 Usp17l5 ubiquitin specific peptidase 17-like 5	gene from Rattus norvegicus	4.8e-39
BLAST match view associations BLAST with RGD1565607 RGD1565607 RGD1565607 similar to mouse deubiquitinating enzyme 6	gene from Rattus norvegicus	4.8e-39
BLAST match view associations BLAST with LOC609310 LOC609310 LOC609310 Ubiquitin carboxyl-terminal hydrolase	protein from Canis lupus familiaris	1.3e-38
BLAST match view associations BLAST with LOC689730 LOC689730 LOC689730 similar to ubiquitin specific peptidase 17 (homolog)	gene from Rattus norvegicus	2.1e-38
BLAST match view associations BLAST with UBP23 UBP23 UBP23 AT5G57990	protein from Arabidopsis thaliana	5.4e-38
BLAST match view associations BLAST with USP36 USP36 USP36 Ubiquitin carboxyl-terminal hydrolase 36	protein from Homo sapiens	2.4e-37
BLAST match view associations BLAST with LOC100686685 LOC100686685 LOC100686685 Uncharacterized protein	protein from Canis lupus familiaris	9.2e-36
BLAST match view associations BLAST with E2R279 E2R279 E2R279 Ubiquitin carboxyl-terminal hydrolase	protein from Canis lupus familiaris	1.9e-35
BLAST match view associations BLAST with LOC100626328 LOC100626328 LOC100626328 Ubiquitin carboxyl-terminal hydrolase	protein from Sus scrofa	4.0e-35
BLAST match view associations BLAST with J9JHA0 J9JHA0 J9JHA0 Uncharacterized protein	protein from Canis lupus familiaris	3.6e-34
BLAST match view associations BLAST with UBP21 UBP21 UBP21 AT5G46740	protein from Arabidopsis thaliana	5.9e-31
BLAST match view associations BLAST with Usp36 Usp36 Usp36 Ubiquitin carboxyl-terminal hydrolase 36	protein from Drosophila virilis	2.4e-30
BLAST match view associations BLAST with Usp36 Usp36 Usp36 Ubiquitin carboxyl-terminal hydrolase 36	protein from Drosophila erecta	6.5e-30
BLAST match view associations BLAST with Usp36 Usp36 Usp36 Ubiquitin carboxyl-terminal hydrolase 36	protein from Drosophila willistoni	3.4e-29
BLAST match view associations BLAST with Usp36 Usp36 Usp36 Ubiquitin carboxyl-terminal hydrolase 36	protein from Drosophila pseudoobscura pseudoobscura	8.2e-28
BLAST match view associations BLAST with Usp36 Usp36 Usp36 Ubiquitin carboxyl-terminal hydrolase 36	protein from Drosophila simulans	2.1e-27
BLAST match view associations BLAST with Usp36 Usp36 Usp36 Ubiquitin carboxyl-terminal hydrolase 36	protein from Drosophila mojavensis	6.8e-27
BLAST match view associations BLAST with Usp36 Usp36 Usp36 Ubiquitin carboxyl-terminal hydrolase 36	protein from Drosophila ananassae	7.3e-27
BLAST match view associations BLAST with Usp36 Usp36 Usp36 Ubiquitin carboxyl-terminal hydrolase 36	protein from Drosophila grimshawi	8.7e-27
BLAST match view associations BLAST with Usp36 Usp36 Usp36 Ubiquitin carboxyl-terminal hydrolase 36	protein from Drosophila yakuba	9.9e-27
BLAST match view associations BLAST with scny scny scny scrawny	protein from Drosophila melanogaster	2.0e-26
BLAST match view associations BLAST with UBP20 UBP20 UBP20 AT4G17895	protein from Arabidopsis thaliana	8.7e-24
BLAST match view associations BLAST with USP3 USP3 USP3 Ubiquitin carboxyl-terminal hydrolase 3	protein from Homo sapiens	4.9e-23
BLAST match view associations BLAST with not not not non-stop	protein from Drosophila melanogaster	1.3e-22
BLAST match view associations BLAST with Usp8 Usp8 Usp8 ubiquitin specific peptidase 8	gene from Rattus norvegicus	7.5e-22
BLAST match view associations BLAST with USP2 USP2 USP2 Ubiquitin carboxyl-terminal hydrolase 2	protein from Gallus gallus	9.3e-22
BLAST match view associations BLAST with USP8 USP8 USP8 Ubiquitin carboxyl-terminal hydrolase	protein from Bos taurus	1.1e-21
BLAST match view associations BLAST with UBP8 UBP8 UBP8 Ubiquitin-specific protease that is a component of the SAGA complex	gene from Saccharomyces cerevisiae	3.8e-21
BLAST match view associations BLAST with E1C0G5 E1C0G5 E1C0G5 Ubiquitin carboxyl-terminal hydrolase	protein from Gallus gallus	4.2e-21
BLAST match view associations BLAST with USP46 USP46 USP46 Ubiquitin carboxyl-terminal hydrolase 46	protein from Homo sapiens	6.4e-21
BLAST match view associations BLAST with USP8 USP8 USP8 Ubiquitin carboxyl-terminal hydrolase	protein from Sus scrofa	7.2e-21
BLAST match view associations BLAST with Usp8 Usp8 Usp8 ubiquitin specific peptidase 8	protein from Mus musculus	9.3e-21
BLAST match view associations BLAST with USP36 USP36 USP36 Ubiquitin carboxyl-terminal hydrolase 36	protein from Homo sapiens	1.0e-20
BLAST match view associations BLAST with UBP2 UBP2 UBP2 AT1G04860	protein from Arabidopsis thaliana	1.1e-20
BLAST match view associations BLAST with usp2a usp2a usp2a ubiquitin specific peptidase 2a	gene_product from Danio rerio	1.5e-20
BLAST match view associations BLAST with USP8 USP8 USP8 Ubiquitin carboxyl-terminal hydrolase	protein from Bos taurus	1.6e-20
BLAST match view associations BLAST with USP8 USP8 USP8 Ubiquitin carboxyl-terminal hydrolase	protein from Homo sapiens	1.8e-20
BLAST match view associations BLAST with USP48 USP48 USP48 Uncharacterized protein	protein from Bos taurus	1.9e-20
BLAST match view associations BLAST with usp48 usp48 usp48 ubiquitin specific peptidase 48	gene_product from Danio rerio	2.0e-20
BLAST match view associations BLAST with USP8 USP8 USP8 Ubiquitin carboxyl-terminal hydrolase	protein from Canis lupus familiaris	2.1e-20
BLAST match view associations BLAST with USP8 USP8 USP8 Ubiquitin carboxyl-terminal hydrolase 8	protein from Homo sapiens	2.1e-20
BLAST match view associations BLAST with UBP3 UBP3 UBP3 AT4G39910	protein from Arabidopsis thaliana	2.3e-20
BLAST match view associations BLAST with USP48 USP48 USP48 Ubiquitin carboxyl-terminal hydrolase 48	protein from Homo sapiens	2.5e-20
BLAST match view associations BLAST with USP48 USP48 USP48 Uncharacterized protein	protein from Canis lupus familiaris	2.5e-20
BLAST match view associations BLAST with USP48 USP48 USP48 Ubiquitin carboxyl-terminal hydrolase 48	protein from Homo sapiens	2.5e-20
BLAST match view associations BLAST with USP12P1 USP12P1 USP12P1 Ubiquitin carboxyl-terminal hydrolase	protein from Gallus gallus	3.6e-20
BLAST match view associations BLAST with Usp27x Usp27x Usp27x ubiquitin specific peptidase 27, X-linked	gene from Rattus norvegicus	4.0e-20
BLAST match view associations BLAST with usp22 usp22 usp22 ubiquitin specific peptidase 22	gene_product from Danio rerio	4.1e-20
BLAST match view associations BLAST with Usp27x Usp27x Usp27x ubiquitin specific peptidase 27, X chromosome	protein from Mus musculus	6.9e-20
BLAST match view associations BLAST with usp-3 usp-3 usp-3	gene from Caenorhabditis elegans	7.3e-20