Query 039540
Match_columns 99
No_of_seqs 107 out of 714
Neff 6.8
Searched_HMMs 46136
Date Fri Mar 29 10:44:17 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/039540.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/039540hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 cd01960 nsLTP1 nsLTP1: Non-spe 100.0 4.2E-30 9E-35 163.3 4.6 89 4-93 1-89 (89)
2 cd04660 nsLTP_like nsLTP_like: 99.6 2.5E-16 5.3E-21 96.9 2.0 67 6-82 1-69 (73)
3 cd00010 AAI_LTSS AAI_LTSS: Alp 99.5 4.7E-15 1E-19 88.1 2.0 62 13-79 1-63 (63)
4 smart00499 AAI Plant lipid tra 99.1 4E-11 8.6E-16 72.2 2.9 69 6-83 1-76 (79)
5 PF14368 LTP_2: Probable lipid 99.1 8E-12 1.7E-16 79.0 -0.9 65 10-83 23-93 (96)
6 PF00234 Tryp_alpha_amyl: Prot 99.1 2E-12 4.3E-17 81.3 -5.2 64 12-83 14-87 (90)
7 cd01959 nsLTP2 nsLTP2: Non-spe 99.0 1.7E-10 3.7E-15 70.0 2.5 58 11-82 4-64 (66)
8 PF14547 Hydrophob_seed: Hydro 76.9 0.5 1.1E-05 29.9 -0.9 71 6-82 2-79 (85)
9 cd01958 HPS_like HPS_like: Hyd 74.0 2.5 5.3E-05 26.8 1.7 71 5-82 3-80 (85)
10 PF05617 Prolamin_like: Prolam 48.2 23 0.0005 20.6 2.6 19 22-40 23-41 (70)
11 cd00261 AAI_SS AAI_SS: Alpha-A 23.4 34 0.00075 21.6 0.5 61 11-81 13-104 (110)
No 1
>cd01960 nsLTP1 nsLTP1: Non-specific lipid-transfer protein type 1 (nsLTP1) subfamily; Plant nsLTPs are small, soluble proteins that facilitate the transfer of fatty acids, phospholipids, glycolipids, and steroids between membranes. In addition to lipid transport and assembly, nsLTPs also play a key role in the defense of plants against pathogens. There are two closely-related types of nsLTPs, types 1 and 2, which differ in protein sequence, molecular weight, and biological properties. nsLTPs contain an internal hydrophobic cavity, which serves as the binding site for lipids. The hydrophobic cavity accommodates various fatty acid ligands containing from ten to 18 carbon atoms. In general, the cavity is larger in nsLTP1 than in nsLTP2. nsLTP1 proteins are located in extracellular layers and in vacuolar structures. They may be involved in the formation of cutin layers on plant surfaces by transporting cutin monomers. Many nsLTP1 proteins have been characterized as allergens in humans.
Probab=99.96 E-value=4.2e-30 Score=163.29 Aligned_cols=89 Identities=37% Similarity=0.805 Sum_probs=84.5
Q ss_pred CChhhhhhCccccHHhhcCCCCCCcHHhHHHHHhhhhccccccCCcccceeecccccCCCCCCcccccccccccCCCCCC
Q 039540 4 LSCDEVILDLVPCLSYLRGETKQPSAACCSGAQKISNGAKSQAAKKDVCTCIQKSLASVGPYDKNLIPLIPQKCGIPLTL 83 (99)
Q Consensus 4 ~~C~~v~~~L~pCl~yl~g~~~~P~~~CC~~v~~l~~~a~t~~dr~~~C~Cl~~~~~~~~~in~~~a~~LP~~C~v~~~~ 83 (99)
++|.++...|+||++||+|++..|+++||+|+++|++.++|+.|++.+|+|+++.+.++++||++|+++||++|||+++|
T Consensus 1 ~~C~~v~~~l~~C~~y~~g~~~~Ps~~CC~~v~~l~~~~~t~~~~~~~C~C~~~~~~~~~~i~~~~a~~LP~~C~v~~~~ 80 (89)
T cd01960 1 ISCGQVTSLLAPCLGYLTGGGPAPSPACCSGVKSLNGLAKTTADRQAACNCLKSAAAGISGLNPGRAAGLPGKCGVSIPY 80 (89)
T ss_pred CCHHHHHhhHHhHHHHHhCCCCCCChHHhhhhHHHhhccCCCCchhhhhhcccccccccCCCCHHHHHhChHhcccCCCC
Confidence 47999999999999999998789999999999999999999999999999999888888669999999999999999999
Q ss_pred CCCCCCCCCC
Q 039540 84 PPIDAKTDCS 93 (99)
Q Consensus 84 ~~is~~~dC~ 93 (99)
+ |+++|||+
T Consensus 81 ~-i~~~~dC~ 89 (89)
T cd01960 81 P-ISPSTDCS 89 (89)
T ss_pred C-CCCCCCCC
Confidence 9 99999996
No 2
>cd04660 nsLTP_like nsLTP_like: Non-specific lipid-transfer protein (nsLTP)-like subfamily; composed of predominantly uncharacterized proteins with similarity to nsLTPs, including Medicago truncatula MtN5, the root-specific Phaseolus vulgaris PVR3, Antirrhinum majus FIL1, and Lilium longiflorum LIM3. Plant nsLTPs are small, soluble proteins that facilitate the transfer of fatty acids, phospholipids, glycolipids, and steroids between membranes. The MtN5 gene is induced during root nodule development. FIL1 is thought to be important in petal and stamen formation. The LIM3 gene is induced during the early prophase stage of meiosis in lily microsporocytes.
Probab=99.60 E-value=2.5e-16 Score=96.90 Aligned_cols=67 Identities=28% Similarity=0.639 Sum_probs=54.8
Q ss_pred hhhhhhCccccHHhhcCCC--CCCcHHhHHHHHhhhhccccccCCcccceeecccccCCCCCCcccccccccccCCCCC
Q 039540 6 CDEVILDLVPCLSYLRGET--KQPSAACCSGAQKISNGAKSQAAKKDVCTCIQKSLASVGPYDKNLIPLIPQKCGIPLT 82 (99)
Q Consensus 6 C~~v~~~L~pCl~yl~g~~--~~P~~~CC~~v~~l~~~a~t~~dr~~~C~Cl~~~~~~~~~in~~~a~~LP~~C~v~~~ 82 (99)
|+..+..|+||++||++++ ..|++.||++||++. + .|+|.+.....++.||.++++.||++|||+++
T Consensus 1 C~~~~~~L~~C~~yl~~~~~~~~Ps~~CC~~vk~~~--------~--~C~C~~~~~~~~~~i~~~~a~~Lp~~Cgv~~p 69 (73)
T cd04660 1 CNMDLDLLAECQPYVTGPNPPPPPSRECCAALRRAD--------L--PCLCRYKTSLVLQIIDPDKAVYLPAKCGLPLP 69 (73)
T ss_pred CCCCHHHHHHHHHHHcCCCCCCCCCHHHHHHHHcCC--------c--CCEeeccCCCcccccCHHHHHHHHHHcCCCCC
Confidence 4555588999999999876 368999999999843 3 39999876655557999999999999999855
No 3
>cd00010 AAI_LTSS AAI_LTSS: Alpha-Amylase Inhibitors (AAI), Lipid Transfer (LT) and Seed Storage (SS) Protein family; a protein family unique to higher plants that includes cereal-type alpha-amylase inhibitors, lipid transfer proteins, seed storage proteins, and similar proteins. Proteins in this family are known to play important roles, in defending plants from insects and pathogens, lipid transport between intracellular membranes, and nutrient storage. Many proteins of this family have been identified as allergens in humans. These proteins contain a common pattern of eight cysteines that form four disulfide bridges.
Probab=99.52 E-value=4.7e-15 Score=88.09 Aligned_cols=62 Identities=32% Similarity=0.701 Sum_probs=49.7
Q ss_pred ccccHHhhcCCCCCCcHHhHHHHHhhhhccccccCCcccceeecccccCCCCC-CcccccccccccCC
Q 039540 13 LVPCLSYLRGETKQPSAACCSGAQKISNGAKSQAAKKDVCTCIQKSLASVGPY-DKNLIPLIPQKCGI 79 (99)
Q Consensus 13 L~pCl~yl~g~~~~P~~~CC~~v~~l~~~a~t~~dr~~~C~Cl~~~~~~~~~i-n~~~a~~LP~~C~v 79 (99)
|+||++|++|+...|+++||++++++++. |++..|.++++......++ |.++++.||++|||
T Consensus 1 L~~C~~y~~~~~~~Ps~~CC~~l~~~~~~-----~~~ClC~~~~~~~~~~~~~~~~~~a~~LP~~Cgv 63 (63)
T cd00010 1 LAPCLSYLTGGATAPPSDCCSGLKSVVKS-----DPKCLCAALNGPGASLLGLKNATRALALPAACGL 63 (63)
T ss_pred CcchHHHHcCCCCCCChHHHHHHHHHHhc-----ChhhHHHHHcCccccccCcccHHHHHhchHhcCC
Confidence 68999999987779999999999999863 4555555566655544355 79999999999996
No 4
>smart00499 AAI Plant lipid transfer protein / seed storage protein / trypsin-alpha amylase inhibitor domain family.
Probab=99.12 E-value=4e-11 Score=72.18 Aligned_cols=69 Identities=32% Similarity=0.754 Sum_probs=54.4
Q ss_pred hhhhhhCccccHHhhcCC--CCCCcHHhHHHHHhhhhccccccCCcccceeecccc--cCCCC---CCcccccccccccC
Q 039540 6 CDEVILDLVPCLSYLRGE--TKQPSAACCSGAQKISNGAKSQAAKKDVCTCIQKSL--ASVGP---YDKNLIPLIPQKCG 78 (99)
Q Consensus 6 C~~v~~~L~pCl~yl~g~--~~~P~~~CC~~v~~l~~~a~t~~dr~~~C~Cl~~~~--~~~~~---in~~~a~~LP~~C~ 78 (99)
|.++...+.+|++|+++. ...|+.+||++++.+. +..|+|..... ..+.. ++..++.+||+.||
T Consensus 1 C~~~~~~~~~c~~~~~~~~~~~~p~~~CC~~l~~~~---------~~~C~C~~~~~~~~~~~~~~~~~~~~a~~lp~~C~ 71 (79)
T smart00499 1 CGQVLLQLAPCLSYLTGGSPGAPPSQQCCSQLRGLN---------SAQCRCLALRAAVLGILEIPGVNAQNAASLPSACG 71 (79)
T ss_pred ChhhhhhHHhhHHHHcCCCCCCCCchHHHHHHHHhc---------ccCCcchhhhcccccccchhhhhHHHHHhhHHhcC
Confidence 677888899999999986 4588899999999985 23699985432 22211 59999999999999
Q ss_pred CCCCC
Q 039540 79 IPLTL 83 (99)
Q Consensus 79 v~~~~ 83 (99)
+..++
T Consensus 72 ~~~~~ 76 (79)
T smart00499 72 VPPPY 76 (79)
T ss_pred CCCCC
Confidence 98664
No 5
>PF14368 LTP_2: Probable lipid transfer; PDB: 2RKN_A 1N89_A 1TUK_A.
Probab=99.10 E-value=8e-12 Score=79.00 Aligned_cols=65 Identities=29% Similarity=0.660 Sum_probs=41.7
Q ss_pred hhCcccc---HHhhcCCCCCCcHHhHHHHHhhhhccccccCCcccceee--cccc-cCCCCCCcccccccccccCCCCCC
Q 039540 10 ILDLVPC---LSYLRGETKQPSAACCSGAQKISNGAKSQAAKKDVCTCI--QKSL-ASVGPYDKNLIPLIPQKCGIPLTL 83 (99)
Q Consensus 10 ~~~L~pC---l~yl~g~~~~P~~~CC~~v~~l~~~a~t~~dr~~~C~Cl--~~~~-~~~~~in~~~a~~LP~~C~v~~~~ 83 (99)
..+|.|| +.|+++ ...|+++||+++|++.+ .+..|+|. ++.. ..+ +||.+++..||++||++.+.
T Consensus 23 ~~~l~~c~~~~~~~~~-~~~Ps~~CC~~l~~~~~-------~~~~ClC~~~~~~~~~~~-~in~~~a~~Lp~~Cg~~~~~ 93 (96)
T PF14368_consen 23 ANSLLPCCPCLCYVTG-GPAPSAACCSALKSVVQ-------ADPPCLCQLLNSPGAPGF-GINVTRALALPAACGVPVPP 93 (96)
T ss_dssp HCCCCHH--HHHHHCC------HHHHHHHCC-----------HCCHHHCCCC-CCHCHH-CCTCHHHHHHHHHCTSS-S-
T ss_pred HHHHhccccchhccCC-CCCCCHHHHHHHHHhcc-------CCCCCHHHhcCccccccC-CcCHHHHHHHHHHcCCCCCC
Confidence 5557777 788884 46999999999999854 23466665 3433 344 89999999999999998664
No 6
>PF00234 Tryp_alpha_amyl: Protease inhibitor/seed storage/LTP family This is a small subfamily; InterPro: IPR003612 This domain is found is several proteins, including plant lipid transfer proteins [], seed storage proteins [] and trypsin-alpha amylase inhibitors [, ]. The domain forms a four-helical bundle in a right-handed superhelix with a folded leaf topology, which is stabilised by disulphide bonds, and which has an internal cavity. More information about this protein can be found at Protein of the Month: alpha-Amylase [].; PDB: 1BFA_A 1BEA_A 1MID_A 1BE2_A 1LIP_A 3GSH_A 1JTB_A 1UVC_B 1BV2_A 1UVB_A ....
Probab=99.05 E-value=2e-12 Score=81.31 Aligned_cols=64 Identities=27% Similarity=0.586 Sum_probs=50.1
Q ss_pred CccccHHhhcCCCCCCcHHhHHHHHhhhhccccccCCcccceeecccccCC----------CCCCcccccccccccCCCC
Q 039540 12 DLVPCLSYLRGETKQPSAACCSGAQKISNGAKSQAAKKDVCTCIQKSLASV----------GPYDKNLIPLIPQKCGIPL 81 (99)
Q Consensus 12 ~L~pCl~yl~g~~~~P~~~CC~~v~~l~~~a~t~~dr~~~C~Cl~~~~~~~----------~~in~~~a~~LP~~C~v~~ 81 (99)
.|.+|+.|++++...|+..||+++++|.. +..|..++.++.+. .+++..+|.+||+.|||.+
T Consensus 14 ~l~~c~~~~~~~~~~~~~~CC~~L~~l~~--------~C~C~~i~~~~~~~~~q~~~~~~~~~~~~~~a~~LP~~C~v~~ 85 (90)
T PF00234_consen 14 RLSPCLPYLQGGCQQPSQQCCQQLRQLDP--------QCRCEAIRQMVRQVIQQQQQGGQEMQIMAQRAQNLPSMCNVSP 85 (90)
T ss_dssp HHHGGHHHHTTSSSHHHHHHHHHHHHHHH--------HHHHHHHHHHHHHSHHCTSTCSHHHHHHHHHHHHHHHHTTSSS
T ss_pred cccccHHHHhcccccchHHHhHHHHHHhH--------HhhCHHHHHHHHhhhhhhhhhHHHHHHHHHHHHHHHHHCCCCC
Confidence 39999999998777899999999999954 33344444444431 2689999999999999998
Q ss_pred CC
Q 039540 82 TL 83 (99)
Q Consensus 82 ~~ 83 (99)
+|
T Consensus 86 ~~ 87 (90)
T PF00234_consen 86 PY 87 (90)
T ss_dssp SS
T ss_pred CC
Confidence 77
No 7
>cd01959 nsLTP2 nsLTP2: Non-specific lipid-transfer protein type 2 (nsLTP2) subfamily; Plant nsLTPs are small, soluble proteins that facilitate the transfer of fatty acids, phospholipids, glycolipids, and steroids between membranes. In addition to lipid transport and assembly, nsLTPs also play a key role in the defense of plants against pathogens. There are two closely-related types of nsLTPs, types 1 and 2, which differ in protein sequence, molecular weight, and biological properties. nsLTPs contain an internal hydrophobic cavity, which serves as the binding site for lipids. nsLTP2 can bind lipids and sterols. Structure studies of rice nsLTPs show that the plasticity of the hydrophobic cavity is an important factor in ligand binding. The flexibility of the sLTP2 cavity allows its binding to rigid sterol molecules, whereas nsLTP1 cannot bind sterols despite its larger cavity size. The resulting nsLTP2/sterol complexes may bind to receptors that trigger defense responses. nsLTP2 gene exp
Probab=99.02 E-value=1.7e-10 Score=69.97 Aligned_cols=58 Identities=31% Similarity=0.673 Sum_probs=46.7
Q ss_pred hCccccHHhhcCCCCCCcHHhHHHHHhhhhccccccCCcccceeec--c-cccCCCCCCcccccccccccCCCCC
Q 039540 11 LDLVPCLSYLRGETKQPSAACCSGAQKISNGAKSQAAKKDVCTCIQ--K-SLASVGPYDKNLIPLIPQKCGIPLT 82 (99)
Q Consensus 11 ~~L~pCl~yl~g~~~~P~~~CC~~v~~l~~~a~t~~dr~~~C~Cl~--~-~~~~~~~in~~~a~~LP~~C~v~~~ 82 (99)
..|++|++|++++ ..|+++||+.+|+ +..|+|.- + ...+| ||.++|+.||++|||++|
T Consensus 4 ~~L~~C~~ai~~~-~~Ps~~CC~~Lk~-----------~~~CLC~y~~~p~l~~~--i~~~~A~~l~~~Cgv~~P 64 (66)
T cd01959 4 TQLSPCLPAILGG-SPPSAACCAKLKE-----------QQSCLCQYAKNPSLKQY--VNSPNARKVLAACGVPYP 64 (66)
T ss_pred hhcccCHHHHhCC-CCCCHHHHHHHhc-----------CCCCeeeeecCccHHhh--cCcHHHHHHHHHcCCCCC
Confidence 4899999999975 5899999999997 22699973 3 22333 899999999999999864
No 8
>PF14547 Hydrophob_seed: Hydrophobic seed protein
Probab=76.87 E-value=0.5 Score=29.90 Aligned_cols=71 Identities=21% Similarity=0.391 Sum_probs=42.0
Q ss_pred hhhhhhCccccHHhhc----CCCCCCcHHhHHHHHhhhhccccccCCcccceeecccccCC--CCCCcc-cccccccccC
Q 039540 6 CDEVILDLVPCLSYLR----GETKQPSAACCSGAQKISNGAKSQAAKKDVCTCIQKSLASV--GPYDKN-LIPLIPQKCG 78 (99)
Q Consensus 6 C~~v~~~L~pCl~yl~----g~~~~P~~~CC~~v~~l~~~a~t~~dr~~~C~Cl~~~~~~~--~~in~~-~a~~LP~~C~ 78 (99)
|..-..+|.-|...+. ..+..+..+||.-++.|.+. --++|+|....++.+ -++|.. .+..|=..||
T Consensus 2 CP~d~lkLgvC~~vL~l~~~~~g~~~~~~CC~li~gL~d~------~AA~CLC~aika~vlg~i~~~ipv~l~~lln~CG 75 (85)
T PF14547_consen 2 CPRDALKLGVCANVLGLVNLVIGNPPRQPCCSLIAGLADL------DAAVCLCTAIKANVLGLINVNIPVALNLLLNACG 75 (85)
T ss_pred CCCcchhhhhhhhhhhhhccccCCCCCCCcChHHhCcccc------hHHHHHHHHHhhhcccccccccccHHHHHHHHhC
Confidence 4444557788888881 11235678999999998753 235799964333222 133332 3445566788
Q ss_pred CCCC
Q 039540 79 IPLT 82 (99)
Q Consensus 79 v~~~ 82 (99)
-..|
T Consensus 76 k~~p 79 (85)
T PF14547_consen 76 KTVP 79 (85)
T ss_pred CcCc
Confidence 7643
No 9
>cd01958 HPS_like HPS_like: Hydrophobic Protein from Soybean (HPS)-like subfamily; composed of proteins with similarity to HPS, a small hydrophobic protein with unknown function related to cereal-type alpha-amylase inhibitors and lipid transfer proteins. In addition to HPS, members of this subfamily include a hybrid proline-rich protein (HyPRP) from maize, a dark-inducible protein (LeDI-2) from Lithospermum erythrorhizon, maize ZRP3 protein, and rice RcC3 protein. HyPRP is an embryo-specific protein that contains an N-terminal proline-rich domain and a C-terminal HPS-like cysteine-rich domain. It has been suggested that HyPRP may be involved in the stability and defense of the developing embryo. LeDI-2 is a root-specific protein that may be involved in regulating the biosynthesis of shikonin derivatives in L. erythrorhizon. Maize ZRP3 and rice RcC3 are root-specific proteins whose functions are yet to be determined. It has been reported that ZRP3 largely accumulates in a distinct subset
Probab=74.04 E-value=2.5 Score=26.79 Aligned_cols=71 Identities=18% Similarity=0.363 Sum_probs=42.6
Q ss_pred ChhhhhhCccccHHhhcCC----CCCCcHHhHHHHHhhhhccccccCCcccceeecccccCCCCCC--cc-ccccccccc
Q 039540 5 SCDEVILDLVPCLSYLRGE----TKQPSAACCSGAQKISNGAKSQAAKKDVCTCIQKSLASVGPYD--KN-LIPLIPQKC 77 (99)
Q Consensus 5 ~C~~v~~~L~pCl~yl~g~----~~~P~~~CC~~v~~l~~~a~t~~dr~~~C~Cl~~~~~~~~~in--~~-~a~~LP~~C 77 (99)
+|..-..+|--|..-+... +..|..+||.-++.|.+. --++|+|-..-++-+ +|+ .. +...|=..|
T Consensus 3 ~CP~dalkLgvCanvL~l~~~~~g~~~~~~CC~ll~GL~dl------dAA~CLCtaikan~l-gi~~~~pv~l~llln~C 75 (85)
T cd01958 3 TCPRDALKLGVCANVLGLSLLLLGTPAVQPCCPLIGGLADL------DAAVCLCTAIKANIL-GISINIPVALSLLLNSC 75 (85)
T ss_pred CCCcchHHhchhHhhhhccccccCCCccchHHHHHcCchhh------heeeeeeeeeecccc-CcccccChhHHHHHHHH
Confidence 4555556777788777421 236668999999998763 235799975444344 343 22 333333457
Q ss_pred CCCCC
Q 039540 78 GIPLT 82 (99)
Q Consensus 78 ~v~~~ 82 (99)
|-..|
T Consensus 76 Gk~~P 80 (85)
T cd01958 76 GRNVP 80 (85)
T ss_pred cCcCC
Confidence 76644
No 10
>PF05617 Prolamin_like: Prolamin-like; InterPro: IPR008502 This entry consists of several proteins of unknown function found exclusively in Arabidopsis thaliana.
Probab=48.17 E-value=23 Score=20.60 Aligned_cols=19 Identities=26% Similarity=0.702 Sum_probs=15.2
Q ss_pred CCCCCCcHHhHHHHHhhhh
Q 039540 22 GETKQPSAACCSGAQKISN 40 (99)
Q Consensus 22 g~~~~P~~~CC~~v~~l~~ 40 (99)
|.....+.+||.++..+.+
T Consensus 23 g~~~~i~~~CC~~i~~~g~ 41 (70)
T PF05617_consen 23 GNKKNIGPECCKAINKMGK 41 (70)
T ss_pred CCCCCCChHHHHHHHHHhH
Confidence 4435889999999999876
No 11
>cd00261 AAI_SS AAI_SS: Alpha-Amylase Inhibitors (AAIs) and Seed Storage (SS) Protein subfamily; composed of cereal-type AAIs and SS proteins. They are mainly present in the seeds of a variety of plants. AAIs play an important role in the natural defenses of plants against insects and pathogens such as fungi, bacteria and viruses. AAIs impede the digestion of plant starch and proteins by inhibiting digestive alpha-amylases and proteinases. Also included in this subfamily are SS proteins such as 2S albumin, gamma-gliadin, napin, and prolamin. These AAIs and SS proteins are also known allergens in humans.
Probab=23.42 E-value=34 Score=21.56 Aligned_cols=61 Identities=21% Similarity=0.454 Sum_probs=38.9
Q ss_pred hCccccHHhhcCC---CC-----------CCcHHhHHHHHhhhhccccccCCcccceeec--ccccCC-----------C
Q 039540 11 LDLVPCLSYLRGE---TK-----------QPSAACCSGAQKISNGAKSQAAKKDVCTCIQ--KSLASV-----------G 63 (99)
Q Consensus 11 ~~L~pCl~yl~g~---~~-----------~P~~~CC~~v~~l~~~a~t~~dr~~~C~Cl~--~~~~~~-----------~ 63 (99)
..|.+|..||.-. .. .....||..++.+.. -|+|-. .++... .
T Consensus 13 ~~L~~C~~yl~qq~~~~~~~~~~~~~~~~~~~qqCCqqL~~i~~----------qcrC~al~~~~~~~~~~~~~~~~~~~ 82 (110)
T cd00261 13 QPLNSCREYLRQQCSGVGGPPVWPQQSCEVLRQQCCQQLAQIPE----------QCRCEALRQMVQGVIQQQQQQQEQQQ 82 (110)
T ss_pred ccCcHHHHHHHHhccCCCCCCCcCccccHHHHHHHHHHHHhCcH----------hhhHHHHHHHHHHHHHhhhccccccC
Confidence 4689999998622 11 123689999999765 477742 221111 0
Q ss_pred ----CCCcccccccccccCCCC
Q 039540 64 ----PYDKNLIPLIPQKCGIPL 81 (99)
Q Consensus 64 ----~in~~~a~~LP~~C~v~~ 81 (99)
..-...|.+||..||+..
T Consensus 83 ~~~~~~~~~~a~~Lp~~C~~~~ 104 (110)
T cd00261 83 GQEVERMRQAAQNLPSMCNLYP 104 (110)
T ss_pred cChHHHHHHHHHhhchhcCCCC
Confidence 122457899999999985
Done!