Query 039540
Match_columns 99
No_of_seqs 107 out of 714
Neff 6.8
Searched_HMMs 29240
Date Mon Mar 25 18:30:10 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/039540.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/039540hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ljo_A Non-specific lipid-tran 100.0 4.8E-36 1.6E-40 192.2 -0.7 93 3-97 1-93 (93)
2 1afh_A Maize nonspecific lipid 100.0 3E-35 1E-39 188.2 0.2 93 3-96 1-93 (93)
3 1t12_A LTP 1, nonspecific lipi 100.0 4.8E-35 1.6E-39 186.7 -0.8 91 3-96 1-91 (91)
4 1bwo_A NS-LTP1, nonspecific li 100.0 1.8E-34 6.2E-39 183.6 -0.2 90 4-95 1-90 (90)
5 1siy_A LTP 1, NS-LTP1, nonspec 100.0 5.3E-34 1.8E-38 181.7 0.0 91 4-96 1-91 (91)
6 2alg_A Non-specific lipid tran 100.0 9.9E-34 3.4E-38 180.8 -1.4 92 3-96 1-92 (92)
7 2rkn_A DIR1 protein, AT5G48485 99.7 6.7E-19 2.3E-23 108.5 -1.3 72 2-84 1-76 (77)
8 1l6h_A LTP2, non-specific lipi 99.5 3.3E-15 1.1E-19 90.4 0.8 59 11-82 6-66 (69)
9 1n89_A Lipid transfer protein; 99.5 1.6E-15 5.5E-20 91.2 -0.8 59 11-82 5-65 (67)
10 3ob4_A Conglutin, maltose ABC 87.2 0.022 7.4E-07 43.9 -4.1 45 29-82 429-485 (500)
11 1hyp_A Hydrophobic protein fro 60.0 1.4 4.9E-05 26.7 -0.5 63 12-83 10-73 (80)
12 1pnb_B Napin BNIB; napin IA an 35.8 13 0.00045 21.7 1.0 46 26-81 9-66 (75)
13 1hss_A 0.19 alpha-amylase inhi 25.8 32 0.0011 22.2 1.7 62 11-82 15-104 (124)
14 2lvf_A 2S albumin; allergen, c 24.2 9.5 0.00032 24.2 -1.1 60 11-80 16-101 (114)
15 4gyx_A Type III collagen fragm 23.8 13 0.00044 18.0 -0.4 11 25-35 21-31 (31)
16 1b1u_A Protein (alpha-amylase/ 21.8 34 0.0012 21.9 1.2 62 11-82 15-108 (122)
17 3rdy_A BWI-1=protease inhibito 20.4 29 0.00097 20.7 0.6 14 86-99 53-66 (79)
No 1
>2ljo_A Non-specific lipid-transfer protein 2; lipid transport; NMR {Lens culinaris}
Probab=100.00 E-value=4.8e-36 Score=192.17 Aligned_cols=93 Identities=32% Similarity=0.765 Sum_probs=87.9
Q ss_pred CCChhhhhhCccccHHhhcCCCCCCcHHhHHHHHhhhhccccccCCcccceeecccccCCCCCCcccccccccccCCCCC
Q 039540 3 LLSCDEVILDLVPCLSYLRGETKQPSAACCSGAQKISNGAKSQAAKKDVCTCIQKSLASVGPYDKNLIPLIPQKCGIPLT 82 (99)
Q Consensus 3 a~~C~~v~~~L~pCl~yl~g~~~~P~~~CC~~v~~l~~~a~t~~dr~~~C~Cl~~~~~~~~~in~~~a~~LP~~C~v~~~ 82 (99)
|++|++|...|+||++||+|+ +.|++.||+|+++|+++|+|+.|||.+|+|+++.+..+++||.++|++||++|||++|
T Consensus 1 AisC~~v~~~L~pCl~Yv~g~-~~p~~~CC~gv~~l~~~a~t~~dr~~~C~clk~~a~~~~~in~~~a~~LP~~CgV~~p 79 (93)
T 2ljo_A 1 AISCGAVTSDLSPCLTYLTGG-PGPSPQCCGGVKKLLAAANTTPDRQAACNCLKSAAGSITKLNTNNAAALPGKCGVNIP 79 (93)
T ss_dssp CCSSHHHHHHHHHHHHHHTTS-SCCCHHHHHHHHHHHHSCCSHHHHHHHHHHHHHHGGGCTTCCHHHHHHHHHHHTCCCS
T ss_pred CCCHHHHHHHHHhHHHHHcCC-CCCCCchhhHHHHHHHHhcCcccHHHHHHhHHhhhhccCCcCHHHHHhhhHhcCCCCC
Confidence 689999999999999999985 4699999999999999999999999999999988877778999999999999999999
Q ss_pred CCCCCCCCCCCcccc
Q 039540 83 LPPIDAKTDCSKVAI 97 (99)
Q Consensus 83 ~~~is~~~dC~~i~~ 97 (99)
|+ ||++|||++|++
T Consensus 80 ~~-Is~~~dC~~v~~ 93 (93)
T 2ljo_A 80 YK-ISTTTNCNTVKF 93 (93)
T ss_dssp SC-CSTTCCGGGCCC
T ss_pred CC-CCCCCCCCCCCC
Confidence 99 999999999974
No 2
>1afh_A Maize nonspecific lipid transfer protein; lipid-binding protein, molecular modeling,; NMR {Zea mays} SCOP: a.52.1.1 PDB: 1fk0_A* 1fk1_A* 1fk2_A* 1fk3_A* 1fk4_A* 1fk5_A* 1fk6_A* 1fk7_A* 1mzl_A 1mzm_A* 1bv2_A 1rzl_A* 1uva_A* 1uvb_A* 1uvc_A*
Probab=100.00 E-value=3e-35 Score=188.19 Aligned_cols=93 Identities=37% Similarity=0.830 Sum_probs=88.2
Q ss_pred CCChhhhhhCccccHHhhcCCCCCCcHHhHHHHHhhhhccccccCCcccceeecccccCCCCCCcccccccccccCCCCC
Q 039540 3 LLSCDEVILDLVPCLSYLRGETKQPSAACCSGAQKISNGAKSQAAKKDVCTCIQKSLASVGPYDKNLIPLIPQKCGIPLT 82 (99)
Q Consensus 3 a~~C~~v~~~L~pCl~yl~g~~~~P~~~CC~~v~~l~~~a~t~~dr~~~C~Cl~~~~~~~~~in~~~a~~LP~~C~v~~~ 82 (99)
+++|+++...|+||++||+|++..|+++||+|||+|+++|+|+.|||.+|+|++..+.++++||+++|++||++|||+++
T Consensus 1 a~~C~~v~~~L~pCl~y~~~~~~~Ps~~CC~gv~~l~~~a~t~~dr~~~ClC~~~~~~~~~~in~~~A~~LP~~C~v~~p 80 (93)
T 1afh_A 1 AISCGQVASAIAPCISYARGQGSGPSAGCCSGVRSLNNAARTTADRRAACNCLKNAAAGVSGLNAGNAASIPSKCGVSIP 80 (93)
T ss_dssp CCSSHHHHHHHGGGHHHHTTSCCSCCHHHHHHHHHHHHHCCSSHHHHHHHHHHHHHHTTSTTCCHHHHHHHHHHHHCCCS
T ss_pred CCChHHHHHhccCcHHHHcCCCCCChHHHHHHHHHHHHhhcCCCCCcccCEeeccccccccCcCHHHHHHHHHHcCCCCC
Confidence 57999999999999999998877899999999999999999999999999999887777878999999999999999999
Q ss_pred CCCCCCCCCCCccc
Q 039540 83 LPPIDAKTDCSKVA 96 (99)
Q Consensus 83 ~~~is~~~dC~~i~ 96 (99)
|+ ||++|||++|+
T Consensus 81 ~~-is~~~dC~~v~ 93 (93)
T 1afh_A 81 YT-ISTSTDCSRVN 93 (93)
T ss_dssp SC-CSTTCCSSSCC
T ss_pred CC-CCCCCCCccCC
Confidence 99 99999999985
No 3
>1t12_A LTP 1, nonspecific lipid-transfer protein 1; cystein rich protein, lipid transport; NMR {Nicotiana tabacum}
Probab=100.00 E-value=4.8e-35 Score=186.69 Aligned_cols=91 Identities=30% Similarity=0.717 Sum_probs=86.0
Q ss_pred CCChhhhhhCccccHHhhcCCCCCCcHHhHHHHHhhhhccccccCCcccceeecccccCCCCCCcccccccccccCCCCC
Q 039540 3 LLSCDEVILDLVPCLSYLRGETKQPSAACCSGAQKISNGAKSQAAKKDVCTCIQKSLASVGPYDKNLIPLIPQKCGIPLT 82 (99)
Q Consensus 3 a~~C~~v~~~L~pCl~yl~g~~~~P~~~CC~~v~~l~~~a~t~~dr~~~C~Cl~~~~~~~~~in~~~a~~LP~~C~v~~~ 82 (99)
+++|+++...|+||++|++|++. |+ +||+|||+|++.|+|++|||.+|+|+++.+.++++||+++|++||++|||+++
T Consensus 1 a~~C~~v~~~L~pCl~y~~~~~~-P~-~CC~gv~~l~~~a~t~~dr~~~ClClk~~~~~~~~in~~~A~~LP~~C~v~~p 78 (91)
T 1t12_A 1 AITCGQVTSNLAPCLAYLRNTGP-LG-RCCGGVKALVNSARTTEDRQIACTCLKSAAGAISGINLGKAAGLPSTCGVNIP 78 (91)
T ss_dssp CCCHHHHHHHTHHHHHHHTTSSC-CT-THHHHHHHHHHTTCSTHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHTTCCCS
T ss_pred CCChHHHHHhccCcHHHHcCCCC-hH-HHHHHHHHHHhhccCCCCCCccCCCccccccccCCcChhHHHHHHHHcCCCCC
Confidence 57999999999999999998877 88 99999999999999999999999999887777778999999999999999999
Q ss_pred CCCCCCCCCCCccc
Q 039540 83 LPPIDAKTDCSKVA 96 (99)
Q Consensus 83 ~~~is~~~dC~~i~ 96 (99)
|+ ||++|||++|+
T Consensus 79 ~~-is~~~dC~~v~ 91 (91)
T 1t12_A 79 YK-ISPSTDCSKVQ 91 (91)
T ss_dssp SC-SSSSSCCTTCC
T ss_pred CC-CCCCCCCccCC
Confidence 99 99999999985
No 4
>1bwo_A NS-LTP1, nonspecific lipid-transfer protein; wheat, lipid binding, crystallography; HET: LPC; 2.10A {Triticum aestivum} SCOP: a.52.1.1 PDB: 1cz2_A* 1gh1_A 1be2_A* 1jtb_A* 1lip_A 1mid_A* 3cee_A* 3gsh_A*
Probab=99.98 E-value=1.8e-34 Score=183.63 Aligned_cols=90 Identities=33% Similarity=0.754 Sum_probs=85.5
Q ss_pred CChhhhhhCccccHHhhcCCCCCCcHHhHHHHHhhhhccccccCCcccceeecccccCCCCCCcccccccccccCCCCCC
Q 039540 4 LSCDEVILDLVPCLSYLRGETKQPSAACCSGAQKISNGAKSQAAKKDVCTCIQKSLASVGPYDKNLIPLIPQKCGIPLTL 83 (99)
Q Consensus 4 ~~C~~v~~~L~pCl~yl~g~~~~P~~~CC~~v~~l~~~a~t~~dr~~~C~Cl~~~~~~~~~in~~~a~~LP~~C~v~~~~ 83 (99)
++|+++...|+||++|++|++. |+++||+|||+|+++|+|++|||..|+|+++.+.++++||+++|++||++|||+++|
T Consensus 1 i~C~~v~~~L~pCl~y~~~~~~-Ps~~CC~~lk~l~~~a~t~~dr~~~ClClk~~~~~~~~in~~~A~~LP~~C~v~~p~ 79 (90)
T 1bwo_A 1 IDCGHVDSLVRPCLSYVQGGPG-PSGQCCDGVKNLHNQARSQSDRQSACNCLKGIARGIHNLNEDNARSIPPKCGVNLPY 79 (90)
T ss_dssp CCHHHHHHHHGGGHHHHTTCSC-CCHHHHHHHHHHHHHCCSHHHHHHHHHHHHHHHTTCTTCCHHHHHTHHHHHTCCCSS
T ss_pred CCHHHHHHhhcccHHHHcCCCC-CCHHHhHHHHHHHhhccCCCCCCccCcCccCchhccCCcCHHHHHHHHHHcCCCCCC
Confidence 5899999999999999998766 999999999999999999999999999999888888789999999999999999999
Q ss_pred CCCCCCCCCCcc
Q 039540 84 PPIDAKTDCSKV 95 (99)
Q Consensus 84 ~~is~~~dC~~i 95 (99)
+ ||++|||++|
T Consensus 80 ~-is~~~dC~~v 90 (90)
T 1bwo_A 80 T-ISLNIDCSRV 90 (90)
T ss_dssp C-CCTTCCGGGC
T ss_pred C-CCCCCCCCCC
Confidence 9 9999999986
No 5
>1siy_A LTP 1, NS-LTP1, nonspecific lipid-transfer protein 1; alpha helix, lipid binding protein; NMR {Vigna radiata var}
Probab=99.97 E-value=5.3e-34 Score=181.73 Aligned_cols=91 Identities=25% Similarity=0.686 Sum_probs=86.0
Q ss_pred CChhhhhhCccccHHhhcCCCCCCcHHhHHHHHhhhhccccccCCcccceeecccccCCCCCCcccccccccccCCCCCC
Q 039540 4 LSCDEVILDLVPCLSYLRGETKQPSAACCSGAQKISNGAKSQAAKKDVCTCIQKSLASVGPYDKNLIPLIPQKCGIPLTL 83 (99)
Q Consensus 4 ~~C~~v~~~L~pCl~yl~g~~~~P~~~CC~~v~~l~~~a~t~~dr~~~C~Cl~~~~~~~~~in~~~a~~LP~~C~v~~~~ 83 (99)
++|+++...|+||++|++|++. |+++||++||+|+++|+|+.|||..|+|+++.+.++++||.++|++||++|||++||
T Consensus 1 i~C~~v~~~L~pCl~yv~~~~~-Ps~~CC~~lk~l~~~a~t~~d~~~~ClC~k~~~~~~~~in~~~A~~LP~~Cgv~~p~ 79 (91)
T 1siy_A 1 MTCGQVQGNLAQCIGFLQKGGV-VPPSCCTGVKNILNSSRTTADRRAVCSCLKAAAGAVRGINPNNAEALPGKCGVNIPY 79 (91)
T ss_dssp CCTTTTHHHHHHHHHHHTSCSC-CCHHHHHHHHHHHTTTCSSHHHHHHHHHHHHHTTCCSSCCHHHHHHHHHHHTCCCSS
T ss_pred CCHHHHHHhccCcHHHHhCCCC-CcHHHHHHHHHHHhhhccCCCCCcCCcccCCcccccCCcCHHHHHHHHHHcCCCCCC
Confidence 5799999999999999998765 999999999999999999999999999998877888789999999999999999999
Q ss_pred CCCCCCCCCCccc
Q 039540 84 PPIDAKTDCSKVA 96 (99)
Q Consensus 84 ~~is~~~dC~~i~ 96 (99)
+ ||++|||++|+
T Consensus 80 ~-is~~~dC~~v~ 91 (91)
T 1siy_A 80 K-ISTSTNCNSIN 91 (91)
T ss_dssp C-SCTTSCSSTTC
T ss_pred C-CCCCCCCccCC
Confidence 9 99999999985
No 6
>2alg_A Non-specific lipid transfer protein; LTP, NS-LTP, FOOD allergen, lipid transport; HET: DAO P6G; 2.30A {Prunus persica} PDB: 2b5s_A*
Probab=99.97 E-value=9.9e-34 Score=180.78 Aligned_cols=92 Identities=32% Similarity=0.747 Sum_probs=86.0
Q ss_pred CCChhhhhhCccccHHhhcCCCCCCcHHhHHHHHhhhhccccccCCcccceeecccccCCCCCCcccccccccccCCCCC
Q 039540 3 LLSCDEVILDLVPCLSYLRGETKQPSAACCSGAQKISNGAKSQAAKKDVCTCIQKSLASVGPYDKNLIPLIPQKCGIPLT 82 (99)
Q Consensus 3 a~~C~~v~~~L~pCl~yl~g~~~~P~~~CC~~v~~l~~~a~t~~dr~~~C~Cl~~~~~~~~~in~~~a~~LP~~C~v~~~ 82 (99)
+++|+++...|+||++|++|++ .|+++||++||+|+++|+|++|||..|+|++..+.++++||+++|++||++|||++|
T Consensus 1 ~~~C~~v~~~L~pCl~y~~~~~-~p~~~CC~~lk~l~~~a~t~~d~~~~ClC~~~~~~~~~~in~~~A~~LP~~Cgv~~p 79 (92)
T 2alg_A 1 MITCGQVSSSLAPCIPYVRGGG-AVPPACCNGIRNVNNLARTTPDRQAACNCLKQLSASVPGVNPNNAAALPGKCGVSIP 79 (92)
T ss_dssp CCCHHHHHHHHGGGHHHHHHCS-CCCHHHHHHHHHHHHHCCSHHHHHHHHHHHHHHHHHSTTCCHHHHHHHHHHTTCCCS
T ss_pred CCChHHHHHhccCcHHHHcCCC-CCCHHHHHHHHHHHhhhcccCCCCcCCccccCcccccCccChHHHHHHHHHcCCCCC
Confidence 5789999999999999999865 588899999999999999999999999999877777778999999999999999999
Q ss_pred CCCCCCCCCCCccc
Q 039540 83 LPPIDAKTDCSKVA 96 (99)
Q Consensus 83 ~~~is~~~dC~~i~ 96 (99)
|+ ||++|||++|+
T Consensus 80 ~~-is~~~dC~~v~ 92 (92)
T 2alg_A 80 YK-ISASTNCATVK 92 (92)
T ss_dssp SC-SSTTSCGGGCC
T ss_pred CC-CCCCCCCccCC
Confidence 99 99999999985
No 7
>2rkn_A DIR1 protein, AT5G48485; LTP, defense signaling protein, signaling protein, lipid TRA; HET: LP3; 1.60A {Arabidopsis thaliana}
Probab=99.69 E-value=6.7e-19 Score=108.46 Aligned_cols=72 Identities=28% Similarity=0.527 Sum_probs=61.5
Q ss_pred CCCChhhhhhCccccHHhhcCC-CCCCcHHhHHHHHhhhhccccccCCcccceeeccc---ccCCCCCCccccccccccc
Q 039540 2 SLLSCDEVILDLVPCLSYLRGE-TKQPSAACCSGAQKISNGAKSQAAKKDVCTCIQKS---LASVGPYDKNLIPLIPQKC 77 (99)
Q Consensus 2 ~a~~C~~v~~~L~pCl~yl~g~-~~~P~~~CC~~v~~l~~~a~t~~dr~~~C~Cl~~~---~~~~~~in~~~a~~LP~~C 77 (99)
+..+|+++...|+||++|++++ ...|+++||++||+ .|+ .|+|.+.. +.+| +||.++|+.||++|
T Consensus 1 ~~~~C~~~~~~L~pC~~yv~~~~~~~Ps~~CC~~lk~--------~~~--~ClC~~~~~~~~~~~-gin~~~A~~LP~~C 69 (77)
T 2rkn_A 1 AIDLCGMSQDELNECKPAVSKENPTSPSQPCCTALQH--------ADF--ACLCGYKNSPWLGSF-GVDPELASALPKQC 69 (77)
T ss_dssp CCCBTTBCHHHHHHHGGGGBSSSCCCCCHHHHHHHTT--------CCH--HHHHTTTTCHHHHHH-TBCHHHHHHHHHHT
T ss_pred CcchHHhHHHhHhhCHHHHcCCCCCCCCHHHHHHHHh--------cCc--CCcCcccCCcchhhc-CcCHHHHHHHHHHc
Confidence 3578999999999999999974 56899999999998 123 89999765 5667 79999999999999
Q ss_pred CCCCCCC
Q 039540 78 GIPLTLP 84 (99)
Q Consensus 78 ~v~~~~~ 84 (99)
||++||.
T Consensus 70 gv~~p~~ 76 (77)
T 2rkn_A 70 GLANAPT 76 (77)
T ss_dssp TCSCCCC
T ss_pred CCCCCCC
Confidence 9998874
No 8
>1l6h_A LTP2, non-specific lipid transfer protein; NSLTP2, plant LTP, lipid transport; NMR {Oryza sativa} SCOP: a.52.1.1
Probab=99.49 E-value=3.3e-15 Score=90.36 Aligned_cols=59 Identities=25% Similarity=0.466 Sum_probs=48.2
Q ss_pred hCccccHHhhcCCCCCCcHHhHHHHHhhhhccccccCCccccee--ecccccCCCCCCcccccccccccCCCCC
Q 039540 11 LDLVPCLSYLRGETKQPSAACCSGAQKISNGAKSQAAKKDVCTC--IQKSLASVGPYDKNLIPLIPQKCGIPLT 82 (99)
Q Consensus 11 ~~L~pCl~yl~g~~~~P~~~CC~~v~~l~~~a~t~~dr~~~C~C--l~~~~~~~~~in~~~a~~LP~~C~v~~~ 82 (99)
..|.||++||+++ ..|+++||++||+. ..|+| +++..... +||.++|+.||++|||++|
T Consensus 6 ~~L~pC~~~v~~~-~~Ps~~CC~~lk~~-----------~~ClC~~~k~~~~~~-~in~~~A~~Lp~~Cgv~~P 66 (69)
T 1l6h_A 6 GQLTVCTGAIAGG-ARPTAACCSSLRAQ-----------QGCFCQFAKDPRYGR-YVNSPNARKAVSSCGIALP 66 (69)
T ss_dssp TTHHHHHHHHTTC-CSTTHHHHHHHHHH-----------HHHHHHHTTCSSHHH-HTTTTTGGGCCCCCSSCSC
T ss_pred hhcccCHHHHcCC-CCCCHHHHHhhCCC-----------CCCCCccccCccccc-ccCHHHHHHHHHHcCCCCC
Confidence 4789999999986 47999999999973 37999 55543322 6999999999999999864
No 9
>1n89_A Lipid transfer protein; lipid transport; HET: PGM; NMR {Triticum turgidum subsp} SCOP: a.52.1.1 PDB: 1tuk_A*
Probab=99.48 E-value=1.6e-15 Score=91.25 Aligned_cols=59 Identities=19% Similarity=0.385 Sum_probs=48.4
Q ss_pred hCccccHHhhcCCCCCCcHHhHHHHHhhhhccccccCCccccee--ecccccCCCCCCcccccccccccCCCCC
Q 039540 11 LDLVPCLSYLRGETKQPSAACCSGAQKISNGAKSQAAKKDVCTC--IQKSLASVGPYDKNLIPLIPQKCGIPLT 82 (99)
Q Consensus 11 ~~L~pCl~yl~g~~~~P~~~CC~~v~~l~~~a~t~~dr~~~C~C--l~~~~~~~~~in~~~a~~LP~~C~v~~~ 82 (99)
..|+||++||+++ ..|+++||++||+. ..|+| +++..... +||.++|+.||++|||++|
T Consensus 5 ~~L~pC~~~v~~~-~~Ps~~CC~~lk~~-----------~~ClC~~~k~~~~~~-~in~~~A~~Lp~~Cgv~~P 65 (67)
T 1n89_A 5 SQLAVCASAILSG-AKPSGECCGNLRAQ-----------QGCFCQYAKDPTYGQ-YIRSPHARDTLTSCGLAVP 65 (67)
T ss_dssp STTHHHHHHHTTC-CCCCHHHHHHHHHH-----------SSHHHHGGGCSTTHH-HHTCHHHHHHHHHHTSCCS
T ss_pred hhcccCHHHHcCC-CCCCHHHHHhhCCC-----------CCCCCccccCccccc-ccCHHHHHHHHHHcCCCCC
Confidence 4799999999986 47999999999972 47999 55543322 5999999999999999865
No 10
>3ob4_A Conglutin, maltose ABC transporter periplasmic protein, ARAH; alpha-amylase inhibitors (AAI), lipid transfer (LT) and SEED (SS) protein family; HET: MLR; 2.71A {Escherichia coli}
Probab=87.17 E-value=0.022 Score=43.92 Aligned_cols=45 Identities=27% Similarity=0.717 Sum_probs=29.0
Q ss_pred HHhHHHHHhhhhccccccCCcccceee--cccccCC-----C-----CCCcccccccccccCCCCC
Q 039540 29 AACCSGAQKISNGAKSQAAKKDVCTCI--QKSLASV-----G-----PYDKNLIPLIPQKCGIPLT 82 (99)
Q Consensus 29 ~~CC~~v~~l~~~a~t~~dr~~~C~Cl--~~~~~~~-----~-----~in~~~a~~LP~~C~v~~~ 82 (99)
.+||+.++.+.. ++-|+|- +.++.+. . .+ ..+|..||..||+..|
T Consensus 429 ~~cc~~l~~~~~--------~~~c~c~~~~~~~~~~~~~~~~~~~~~~~-~~~a~~~p~~c~~~~~ 485 (500)
T 3ob4_A 429 ERCCNELNEFEN--------NQRCMCEALQQIMENQSDRLQGRQQEQQF-KRELRNLPQQCGLRAP 485 (500)
T ss_dssp HHHHHHHGGGTT--------CHHHHHHHHHHHHHHHHTTCCSSHHHHHH-HHHHHTHHHHTTCCCC
T ss_pred HHHHHHHHhCCc--------ccccccHHHHHHHHHHHHHhhhHHHHHHH-HHHHhhCchhcCCCCC
Confidence 789999998752 2468884 3322210 0 11 3459999999999855
No 11
>1hyp_A Hydrophobic protein from soybean; hydrophobic SEED protein; 1.80A {Glycine max} SCOP: a.52.1.1
Probab=59.95 E-value=1.4 Score=26.71 Aligned_cols=63 Identities=27% Similarity=0.440 Sum_probs=40.0
Q ss_pred CccccHHhhcCCCCCCcHHhHHHHHhhhhccccccCCcccceeecccccCCCCCCcccccc-cccccCCCCCC
Q 039540 12 DLVPCLSYLRGETKQPSAACCSGAQKISNGAKSQAAKKDVCTCIQKSLASVGPYDKNLIPL-IPQKCGIPLTL 83 (99)
Q Consensus 12 ~L~pCl~yl~g~~~~P~~~CC~~v~~l~~~a~t~~dr~~~C~Cl~~~~~~~~~in~~~a~~-LP~~C~v~~~~ 83 (99)
+|--|..-+.|. ..|..+||.-++.|.+. --++|+|-..-+.++ +|.....+ |=..||-..|-
T Consensus 10 kLgvCanvL~g~-~~~~~~CC~Ll~GL~dl------eAAvCLCtaik~Lgi--lnlpv~L~llln~Cgk~~P~ 73 (80)
T 1hyp_A 10 DLSICLNILGGS-LGTVDDCCALIGGLGDI------EAIVCLCIQLRALGI--LNLNRNLQLILNSCGRSYPS 73 (80)
T ss_dssp CCGGGGGGGGTC-CTTHHHHHHHHHTSCHH------HHHHHHHHHHHHHTC--SCHHHHHHHHHHHTTCSSCC
T ss_pred chhHHHHHhCcC-CCCCCccchhhhCcchh------hhhhhhhhhccccce--eecChhHHHHHHHhCCcCcC
Confidence 678888888653 24778999999998753 134799963222222 35433333 55679987553
No 12
>1pnb_B Napin BNIB; napin IA and IB, albumin SEED protein, SEED storage protein; NMR {Brassica napus} SCOP: a.52.1.3
Probab=35.76 E-value=13 Score=21.67 Aligned_cols=46 Identities=20% Similarity=0.489 Sum_probs=30.0
Q ss_pred CCcHHhHHHHHhhhhccccccCCcccceee--cccc------cCCCC----CCcccccccccccCCCC
Q 039540 26 QPSAACCSGAQKISNGAKSQAAKKDVCTCI--QKSL------ASVGP----YDKNLIPLIPQKCGIPL 81 (99)
Q Consensus 26 ~P~~~CC~~v~~l~~~a~t~~dr~~~C~Cl--~~~~------~~~~~----in~~~a~~LP~~C~v~~ 81 (99)
..-..||+.++.+.. -|.|- +.++ ..+++ -...+|..||..||+..
T Consensus 9 ~~~qqCC~qL~~~~~----------~CrC~aL~~~~~~~~~qgq~~~~q~~~~~q~a~~LP~~Cnl~~ 66 (75)
T 1pnb_B 9 WLREQCCNELYQEDQ----------VCVCPTLKQAAKSVRVQGQHGPFQSTRIYQIAKNLPNVCNMKQ 66 (75)
T ss_dssp SCTHHHHHHHHTSCG----------GGSHHHHHHHHHHHHSGGGCSSCCHHHHHHHCCSCSCSSCCTT
T ss_pred HHHHHHHHHHHhCCc----------ccccHHHHHHHHHHHHHcccchHHHHHHHHHHHhhHHhcCCCC
Confidence 445799999999754 57774 3332 11311 12457899999999963
No 13
>1hss_A 0.19 alpha-amylase inhibitor; cereal inhibitor, animal amylase; 2.06A {Triticum aestivum} SCOP: a.52.1.2
Probab=25.78 E-value=32 Score=22.22 Aligned_cols=62 Identities=26% Similarity=0.450 Sum_probs=38.2
Q ss_pred hCccccHHhhcCC---CCCC---cHHhHHHHHhhhhccccccCCcccceee--ccccc----------------CCCC--
Q 039540 11 LDLVPCLSYLRGE---TKQP---SAACCSGAQKISNGAKSQAAKKDVCTCI--QKSLA----------------SVGP-- 64 (99)
Q Consensus 11 ~~L~pCl~yl~g~---~~~P---~~~CC~~v~~l~~~a~t~~dr~~~C~Cl--~~~~~----------------~~~~-- 64 (99)
..|..|..||... ...| -..||+.++.+.. -|+|- ..++. .+|+
T Consensus 15 ~pL~~Cr~Yv~~~C~g~~~p~~~~~~CC~QL~~i~~----------~CRC~ALr~m~~~~~~~~g~~~g~~~~e~~pgCr 84 (124)
T 1hss_A 15 PALPACRPLLRLQCNGSQVPEAVLRDCCQQLAHISE----------WCRCGALYSMLDSMYKEHGAQEGQAGTGAFPRCR 84 (124)
T ss_dssp SCCTTHHHHHHHHTTTCCCCHHHHHHHHHHHHTSCT----------TTHHHHHHHHHHHHHHHC---------CCSTTCC
T ss_pred CcchHHHHHHHHHccCCCCcHHHHHHHHHHHHhcCc----------ccchHHHHHHHHhhhhhhhhhccccchhhccCCc
Confidence 3478899999521 1223 3679999999764 58884 22221 1110
Q ss_pred --CCcccccccccccCCCCC
Q 039540 65 --YDKNLIPLIPQKCGIPLT 82 (99)
Q Consensus 65 --in~~~a~~LP~~C~v~~~ 82 (99)
.-..+|+.||+.|||.++
T Consensus 85 re~~~~~A~~LP~~Cnl~~~ 104 (124)
T 1hss_A 85 REVVKLTAASITAVCRLPIV 104 (124)
T ss_dssp HHHHHHHHTTHHHHTTCCEE
T ss_pred HHHHHHHHHhchhhcCCCCC
Confidence 111258899999999765
No 14
>2lvf_A 2S albumin; allergen, copper binding, hydrophobic interaction; NMR {Bertholletia excelsa}
Probab=24.20 E-value=9.5 Score=24.16 Aligned_cols=60 Identities=23% Similarity=0.527 Sum_probs=37.6
Q ss_pred hCccccHHhhc----CCC--CCCc-------HHhHHHHHhhhhccccccCCcccceee--ccccc----CCCCCC-----
Q 039540 11 LDLVPCLSYLR----GET--KQPS-------AACCSGAQKISNGAKSQAAKKDVCTCI--QKSLA----SVGPYD----- 66 (99)
Q Consensus 11 ~~L~pCl~yl~----g~~--~~P~-------~~CC~~v~~l~~~a~t~~dr~~~C~Cl--~~~~~----~~~~in----- 66 (99)
..|..|..||. +.. .... ..||+.++.+.. -|.|- +.++. .+..+-
T Consensus 16 ~~L~~Cq~yv~qq~~~~~~~~~~~~~~~~~l~~CC~qL~qv~~----------~CrC~aL~~~v~~~~qq~~~~~~~~~~ 85 (114)
T 2lvf_A 16 QMLSHCRMYMRQQMEESTYQTMPRRGMEPHMSECCEQLEGMDE----------SCRCEGLRMMMRMMQQKEMQPRGEQMR 85 (114)
T ss_dssp THHHHHHHHHHHHHHTTTTCSCCSSSCCHHHHHHHHHHHHSCH----------HHHHHHHHHHHHHHHHHHCCCCSHHHH
T ss_pred HhHHHHHHHHHHHHhccCCccccccchHHHHHHHHHHHHHCCc----------CccCHHHHHHHHHHHHHHhhhhhhHHH
Confidence 35899999986 211 1111 459999999865 48884 33322 111111
Q ss_pred --cccccccccccCCC
Q 039540 67 --KNLIPLIPQKCGIP 80 (99)
Q Consensus 67 --~~~a~~LP~~C~v~ 80 (99)
..+|.+||..||+.
T Consensus 86 ~~~q~A~~LP~~C~i~ 101 (114)
T 2lvf_A 86 RMMRLAENIPSRCNLS 101 (114)
T ss_dssp HHHHHHHHHHHHHCCC
T ss_pred HHHHHHHhChHhcCCC
Confidence 35799999999986
No 15
>4gyx_A Type III collagen fragment in A HOST peptide STAB the cysteine knot; collagen triple helix, type III collagen cysteine knot, BLOO clotting; 1.49A {Homo sapiens}
Probab=23.79 E-value=13 Score=18.02 Aligned_cols=11 Identities=36% Similarity=1.129 Sum_probs=5.9
Q ss_pred CCCcHHhHHHH
Q 039540 25 KQPSAACCSGA 35 (99)
Q Consensus 25 ~~P~~~CC~~v 35 (99)
+.|+..||.++
T Consensus 21 pgppgpccggv 31 (31)
T 4gyx_A 21 PGPPGPCCGGV 31 (31)
T ss_dssp CCCCCCCC---
T ss_pred CCCCCCCccCC
Confidence 35677899875
No 16
>1b1u_A Protein (alpha-amylase/trypsin inhibitor RATI); bifunctional, hydrolase inhibitor; 2.20A {Eleusine coracana} SCOP: a.52.1.2 PDB: 1bip_A 1tmq_B
Probab=21.77 E-value=34 Score=21.95 Aligned_cols=62 Identities=18% Similarity=0.423 Sum_probs=38.5
Q ss_pred hCccccHHhhcC----CCC-CC----cHHhHHHHHhhhhccccccCCcccceee--cccc----c-----------CCCC
Q 039540 11 LDLVPCLSYLRG----ETK-QP----SAACCSGAQKISNGAKSQAAKKDVCTCI--QKSL----A-----------SVGP 64 (99)
Q Consensus 11 ~~L~pCl~yl~g----~~~-~P----~~~CC~~v~~l~~~a~t~~dr~~~C~Cl--~~~~----~-----------~~~~ 64 (99)
..|..|..||.. ..+ .| -..||+.++.+.. -|+|- ..++ . .+++
T Consensus 15 ~~L~~Cr~Yv~~q~C~~g~~~p~~~~~~~CC~QL~~i~~----------~CRC~ALr~m~~~~~~~~g~~~g~~~~~~pg 84 (122)
T 1b1u_A 15 NPLDSCRWYVSTRTCGVGPRLATQEMKARCCRQLEAIPA----------YCRCEAVRILMDGVVTPSGQHEGRLLQDLPG 84 (122)
T ss_dssp STTTHHHHHHHHHHHCCCCSSCHHHHHHHHHHHHHHSCH----------HHHHHHHHHHHTCEECTTSCEECCCCCCCTT
T ss_pred ccchHHHHHHHHhcccCCCCCchHHHHHHHHHHHHhCCc----------cccHHHHHHHHHhhhhhhcccccccchhccC
Confidence 458899999952 222 33 3569999999765 48884 2111 1 1111
Q ss_pred C----Cccccccc--ccccCCCCC
Q 039540 65 Y----DKNLIPLI--PQKCGIPLT 82 (99)
Q Consensus 65 i----n~~~a~~L--P~~C~v~~~ 82 (99)
- -...|+.| |+.||+.+.
T Consensus 85 C~re~~~~~A~~Lv~P~~Cnl~~~ 108 (122)
T 1b1u_A 85 CPRQVQRAFAPKLVTEVECNLATI 108 (122)
T ss_dssp CCHHHHHHHGGGTTSTTTTCCCCT
T ss_pred CcHHHHHHHHHhcCCcccCCCCCC
Confidence 1 01358899 999999755
No 17
>3rdy_A BWI-1=protease inhibitor/trypsin inhibitor; serine protease inhibitor, potato inhibitor I, trypsin inhib trypsin, hydrolase inhibitor; 1.84A {Fagopyrum esculentum} SCOP: d.40.1.0 PDB: 3rdz_C
Probab=20.38 E-value=29 Score=20.65 Aligned_cols=14 Identities=21% Similarity=0.638 Sum_probs=11.3
Q ss_pred CCCCCCCCcccccC
Q 039540 86 IDAKTDCSKVAIYV 99 (99)
Q Consensus 86 is~~~dC~~i~~~~ 99 (99)
+..+++|+++.+||
T Consensus 53 VT~Dfr~~RVrV~V 66 (79)
T 3rdy_A 53 VPRDLRCDRVWVFV 66 (79)
T ss_dssp CCSCCCSSEEEEEE
T ss_pred cCCccCCCEEEEEE
Confidence 77888999988764
Done!