Query 039541
Match_columns 521
No_of_seqs 434 out of 1989
Neff 10.8
Searched_HMMs 46136
Date Fri Mar 29 10:45:00 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/039541.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/039541hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 TIGR00898 2A0119 cation transp 100.0 1.1E-46 2.4E-51 382.8 45.2 459 35-506 1-504 (505)
2 TIGR01299 synapt_SV2 synaptic 100.0 8.6E-44 1.9E-48 363.8 35.6 423 36-504 160-741 (742)
3 KOG0253 Synaptic vesicle trans 100.0 1E-40 2.3E-45 296.8 28.2 430 25-504 62-527 (528)
4 TIGR00887 2A0109 phosphate:H+ 100.0 3.6E-40 7.8E-45 333.3 30.7 419 36-507 9-499 (502)
5 KOG0569 Permease of the major 100.0 1E-39 2.3E-44 313.2 27.7 399 105-514 46-472 (485)
6 KOG0255 Synaptic vesicle trans 100.0 1.3E-37 2.8E-42 316.7 44.4 475 27-512 4-508 (521)
7 COG2271 UhpC Sugar phosphate p 100.0 9.4E-38 2E-42 285.9 23.5 398 36-496 22-433 (448)
8 PRK10077 xylE D-xylose transpo 100.0 1.2E-36 2.5E-41 307.5 32.0 417 37-510 6-471 (479)
9 PRK10642 proline/glycine betai 100.0 4E-36 8.6E-41 302.7 34.7 392 42-504 15-437 (490)
10 COG2814 AraJ Arabinose efflux 100.0 7.5E-36 1.6E-40 278.0 31.6 372 38-497 8-386 (394)
11 TIGR00903 2A0129 major facilit 100.0 6.4E-36 1.4E-40 288.1 27.1 356 93-498 6-366 (368)
12 PRK09556 uhpT sugar phosphate 100.0 6.1E-36 1.3E-40 299.9 27.7 398 36-496 22-448 (467)
13 TIGR02332 HpaX 4-hydroxyphenyl 100.0 4E-35 8.6E-40 288.7 32.3 391 38-485 3-409 (412)
14 PRK11551 putative 3-hydroxyphe 100.0 1.1E-34 2.4E-39 286.7 33.9 376 38-496 10-395 (406)
15 PRK10406 alpha-ketoglutarate t 100.0 2E-34 4.3E-39 286.2 33.0 381 40-503 19-429 (432)
16 PRK11663 regulatory protein Uh 100.0 3.6E-34 7.8E-39 284.3 33.6 394 37-494 17-421 (434)
17 PRK12307 putative sialic acid 100.0 2E-34 4.2E-39 286.8 31.4 361 36-471 11-380 (426)
18 TIGR00879 SP MFS transporter, 100.0 6.7E-35 1.4E-39 295.2 27.5 420 42-504 27-478 (481)
19 PRK03545 putative arabinose tr 100.0 5.6E-34 1.2E-38 279.6 32.4 341 101-496 32-379 (390)
20 PRK09952 shikimate transporter 100.0 1.9E-33 4.2E-38 279.1 34.2 379 40-498 19-434 (438)
21 KOG0254 Predicted transporter 100.0 7.5E-34 1.6E-38 287.1 29.5 386 120-514 92-501 (513)
22 TIGR00890 2A0111 Oxalate/Forma 100.0 7.8E-34 1.7E-38 278.0 24.3 344 101-490 26-375 (377)
23 PRK11273 glpT sn-glycerol-3-ph 100.0 1.1E-32 2.4E-37 275.1 33.0 401 38-503 24-441 (452)
24 PRK14995 methyl viologen resis 100.0 8.9E-33 1.9E-37 278.5 31.1 385 41-470 4-409 (495)
25 TIGR00891 2A0112 putative sial 100.0 1.1E-32 2.5E-37 272.6 29.7 371 37-471 6-387 (405)
26 TIGR00895 2A0115 benzoate tran 100.0 2.8E-32 6E-37 269.2 32.1 379 37-470 11-396 (398)
27 TIGR00893 2A0114 d-galactonate 100.0 1.3E-32 2.8E-37 271.3 28.5 366 101-493 17-395 (399)
28 KOG0252 Inorganic phosphate tr 100.0 5.9E-35 1.3E-39 268.6 9.1 424 37-511 35-512 (538)
29 PRK09705 cynX putative cyanate 100.0 6E-32 1.3E-36 264.8 30.6 347 101-504 32-389 (393)
30 TIGR00894 2A0114euk Na(+)-depe 100.0 1.7E-31 3.6E-36 268.4 33.0 415 37-499 13-452 (465)
31 PRK05122 major facilitator sup 100.0 1E-31 2.2E-36 264.8 30.8 345 101-503 38-395 (399)
32 PLN00028 nitrate transmembrane 100.0 7.1E-32 1.5E-36 270.2 29.6 383 36-497 29-433 (476)
33 PRK10213 nepI ribonucleoside t 100.0 6.7E-31 1.5E-35 257.2 34.9 333 101-488 43-382 (394)
34 PRK03893 putative sialic acid 100.0 1.7E-31 3.6E-36 271.1 31.2 389 37-484 14-440 (496)
35 PRK15034 nitrate/nitrite trans 100.0 5.6E-31 1.2E-35 254.8 32.3 369 39-496 30-453 (462)
36 PRK15075 citrate-proton sympor 100.0 6.9E-31 1.5E-35 261.0 33.4 347 41-470 13-390 (434)
37 PRK10504 putative transporter; 100.0 6.6E-31 1.4E-35 264.7 33.3 381 44-470 11-411 (471)
38 PF00083 Sugar_tr: Sugar (and 100.0 3.5E-38 7.6E-43 316.0 -19.6 380 117-509 46-449 (451)
39 PRK15402 multidrug efflux syst 100.0 1.6E-30 3.4E-35 256.8 34.0 351 39-471 9-367 (406)
40 TIGR00892 2A0113 monocarboxyla 100.0 1.5E-31 3.2E-36 266.5 25.6 390 38-491 14-415 (455)
41 TIGR00711 efflux_EmrB drug res 100.0 7.5E-31 1.6E-35 265.8 29.7 382 43-470 2-406 (485)
42 TIGR00710 efflux_Bcr_CflA drug 100.0 2.7E-30 6E-35 253.7 32.3 339 101-487 28-374 (385)
43 PRK10091 MFS transport protein 100.0 4.3E-30 9.3E-35 251.2 31.8 338 101-493 26-372 (382)
44 PRK10489 enterobactin exporter 100.0 1.3E-30 2.8E-35 258.2 27.6 360 101-509 40-412 (417)
45 PRK12382 putative transporter; 100.0 1E-29 2.2E-34 249.9 32.6 336 101-494 38-386 (392)
46 TIGR00900 2A0121 H+ Antiporter 100.0 2.8E-30 6.1E-35 251.7 28.3 327 101-471 22-360 (365)
47 PRK03699 putative transporter; 100.0 5.1E-30 1.1E-34 251.7 30.0 368 41-497 5-380 (394)
48 PF07690 MFS_1: Major Facilita 100.0 2.8E-31 6.1E-36 257.4 20.6 325 101-465 19-352 (352)
49 PRK03633 putative MFS family t 100.0 1.7E-29 3.7E-34 246.9 32.6 356 45-494 8-369 (381)
50 TIGR00712 glpT glycerol-3-phos 100.0 1.6E-29 3.4E-34 251.6 31.1 395 40-499 24-436 (438)
51 PRK15403 multidrug efflux syst 100.0 3.1E-29 6.8E-34 246.8 32.7 341 101-488 39-388 (413)
52 TIGR00881 2A0104 phosphoglycer 100.0 1.7E-30 3.7E-35 254.6 23.1 343 101-471 18-369 (379)
53 PRK10133 L-fucose transporter; 100.0 5.1E-29 1.1E-33 246.4 33.1 347 38-470 21-403 (438)
54 TIGR00899 2A0120 sugar efflux 100.0 4E-29 8.7E-34 244.5 31.0 344 101-497 20-374 (375)
55 KOG2532 Permease of the major 100.0 9.9E-29 2.2E-33 241.0 32.9 360 105-496 65-446 (466)
56 PRK09874 drug efflux system pr 100.0 4.7E-29 1E-33 246.9 30.8 348 101-495 37-396 (408)
57 PRK11043 putative transporter; 100.0 1.5E-28 3.3E-33 242.3 34.0 319 101-471 29-354 (401)
58 TIGR00897 2A0118 polyol permea 100.0 1.1E-28 2.5E-33 242.7 33.0 349 102-496 37-400 (402)
59 PRK11102 bicyclomycin/multidru 100.0 2.6E-29 5.6E-34 246.0 28.3 351 99-495 12-370 (377)
60 PRK11652 emrD multidrug resist 100.0 1.1E-28 2.5E-33 242.6 32.3 322 101-472 31-358 (394)
61 KOG1330 Sugar transporter/spin 100.0 1.5E-31 3.2E-36 247.7 10.2 360 37-470 27-408 (493)
62 PRK11195 lysophospholipid tran 100.0 8.9E-29 1.9E-33 242.1 29.1 343 101-492 26-375 (393)
63 COG2223 NarK Nitrate/nitrite t 100.0 5.2E-29 1.1E-33 229.2 24.8 375 37-497 8-401 (417)
64 PRK10473 multidrug efflux syst 100.0 4.9E-28 1.1E-32 237.9 32.4 318 101-470 26-349 (392)
65 KOG2533 Permease of the major 100.0 1.7E-28 3.7E-33 239.7 28.3 367 39-468 41-424 (495)
66 TIGR00885 fucP L-fucose:H+ sym 100.0 7.8E-28 1.7E-32 235.9 30.6 338 45-471 5-378 (410)
67 PRK11646 multidrug resistance 100.0 4.6E-28 9.9E-33 237.7 27.8 339 101-492 34-383 (400)
68 TIGR00883 2A0106 metabolite-pr 100.0 3.2E-28 6.9E-33 239.8 26.8 325 101-470 16-371 (394)
69 cd06174 MFS The Major Facilita 100.0 7.2E-28 1.6E-32 233.4 28.1 321 101-495 22-350 (352)
70 PRK10054 putative transporter; 100.0 1.3E-27 2.8E-32 234.1 27.3 336 101-487 31-374 (395)
71 PRK11010 ampG muropeptide tran 100.0 5E-27 1.1E-31 235.5 32.0 351 101-499 35-405 (491)
72 TIGR00886 2A0108 nitrite extru 100.0 1.4E-27 3E-32 232.8 23.8 323 101-461 24-366 (366)
73 TIGR00902 2A0127 phenyl propri 100.0 1.7E-26 3.6E-31 225.8 29.2 339 101-493 27-375 (382)
74 KOG2504 Monocarboxylate transp 100.0 6.2E-28 1.3E-32 238.4 19.1 414 37-497 40-476 (509)
75 PRK15011 sugar efflux transpor 100.0 1.2E-25 2.6E-30 220.6 33.3 342 102-498 40-392 (393)
76 TIGR00896 CynX cyanate transpo 100.0 3E-26 6.4E-31 222.1 26.4 317 99-471 21-345 (355)
77 TIGR00889 2A0110 nucleoside tr 100.0 5.4E-26 1.2E-30 223.9 28.3 349 101-501 26-407 (418)
78 TIGR00792 gph sugar (Glycoside 99.9 1.9E-25 4.2E-30 223.0 30.0 326 101-470 23-376 (437)
79 PRK11902 ampG muropeptide tran 99.9 4E-25 8.7E-30 217.7 31.0 346 101-499 22-392 (402)
80 PRK11128 putative 3-phenylprop 99.9 3.7E-25 8E-30 216.4 29.5 337 101-491 27-373 (382)
81 PRK08633 2-acyl-glycerophospho 99.9 2E-25 4.3E-30 249.2 30.4 327 104-470 36-380 (1146)
82 TIGR00901 2A0125 AmpG-related 99.9 9.7E-26 2.1E-30 218.7 23.8 311 101-458 11-355 (356)
83 PRK06814 acylglycerophosphoeth 99.9 7.2E-25 1.6E-29 243.7 30.9 316 117-471 52-393 (1140)
84 PRK09528 lacY galactoside perm 99.9 2.4E-25 5.3E-30 220.6 22.7 349 101-494 34-400 (420)
85 PRK10207 dipeptide/tripeptide 99.9 9.6E-25 2.1E-29 217.9 25.6 381 101-495 38-474 (489)
86 PF05977 MFS_3: Transmembrane 99.9 6.4E-24 1.4E-28 211.1 30.0 347 101-494 33-391 (524)
87 TIGR00882 2A0105 oligosacchari 99.9 4.2E-24 9.1E-29 210.2 26.9 345 103-492 28-390 (396)
88 KOG3764 Vesicular amine transp 99.9 3.1E-26 6.7E-31 207.7 10.5 331 117-495 106-452 (464)
89 TIGR00806 rfc RFC reduced fola 99.9 7.2E-24 1.6E-28 201.0 26.1 345 101-466 49-407 (511)
90 COG0738 FucP Fucose permease [ 99.9 1.3E-23 2.8E-28 192.3 26.4 317 101-471 36-381 (422)
91 PF06609 TRI12: Fungal trichot 99.9 4.8E-23 1E-27 203.7 31.7 359 101-468 67-461 (599)
92 TIGR00924 yjdL_sub1_fam amino 99.9 4.3E-23 9.4E-28 206.1 28.4 372 108-493 43-464 (475)
93 PTZ00207 hypothetical protein; 99.9 6E-23 1.3E-27 204.5 24.9 380 101-494 50-549 (591)
94 KOG2615 Permease of the major 99.9 2.9E-23 6.3E-28 187.3 20.4 323 117-470 68-410 (451)
95 TIGR02718 sider_RhtX_FptX side 99.9 5.5E-22 1.2E-26 194.7 30.7 364 45-492 3-386 (390)
96 TIGR00805 oat sodium-independe 99.9 2.4E-23 5.1E-28 213.6 20.4 278 101-403 56-415 (633)
97 PRK09584 tppB putative tripept 99.9 5E-22 1.1E-26 199.5 24.5 373 101-492 45-474 (500)
98 TIGR01301 GPH_sucrose GPH fami 99.9 1.3E-20 2.7E-25 184.3 33.3 367 102-500 28-475 (477)
99 COG2807 CynX Cyanate permease 99.9 2.2E-21 4.8E-26 174.9 25.5 336 101-492 35-380 (395)
100 PRK09669 putative symporter Ya 99.9 8.2E-21 1.8E-25 189.4 30.3 324 101-470 33-384 (444)
101 PF11700 ATG22: Vacuole efflux 99.9 1.1E-19 2.4E-24 179.1 35.4 352 117-503 70-474 (477)
102 PRK10429 melibiose:sodium symp 99.9 3.9E-20 8.4E-25 185.7 29.5 329 101-470 30-389 (473)
103 KOG4686 Predicted sugar transp 99.9 2.5E-21 5.4E-26 167.4 14.8 360 95-501 59-447 (459)
104 PRK09848 glucuronide transport 99.9 1.2E-19 2.7E-24 181.3 29.2 323 101-470 32-384 (448)
105 TIGR00788 fbt folate/biopterin 99.9 2.7E-20 5.8E-25 185.5 23.8 338 101-470 49-409 (468)
106 PF03825 Nuc_H_symport: Nucleo 99.9 2E-19 4.2E-24 174.0 28.6 321 101-470 25-360 (400)
107 COG2211 MelB Na+/melibiose sym 99.9 1.6E-19 3.5E-24 172.5 25.5 328 101-470 36-392 (467)
108 PRK11462 putative transporter; 99.8 1.7E-18 3.6E-23 172.6 30.5 320 102-469 34-382 (460)
109 PRK15462 dipeptide/tripeptide 99.8 3.6E-18 7.9E-23 167.8 28.7 371 103-489 35-469 (493)
110 PF13347 MFS_2: MFS/sugar tran 99.8 7.5E-19 1.6E-23 174.5 22.2 324 101-469 25-379 (428)
111 COG2270 Permeases of the major 99.8 1E-17 2.2E-22 155.0 27.2 353 111-502 52-434 (438)
112 PF01306 LacY_symp: LacY proto 99.8 6.8E-18 1.5E-22 160.0 24.7 353 103-501 33-405 (412)
113 KOG2563 Permease of the major 99.8 2.8E-18 6.1E-23 159.4 16.4 357 36-470 38-417 (480)
114 TIGR01272 gluP glucose/galacto 99.8 1E-16 2.2E-21 150.9 27.4 268 167-480 5-298 (310)
115 PF03209 PUCC: PUCC protein; 99.7 9.2E-14 2E-18 129.5 29.0 321 104-469 6-358 (403)
116 KOG2325 Predicted transporter/ 99.7 1.5E-15 3.3E-20 145.7 17.1 185 38-263 29-234 (488)
117 PF03137 OATP: Organic Anion T 99.6 7.9E-17 1.7E-21 161.1 0.0 352 101-470 26-510 (539)
118 COG3104 PTR2 Dipeptide/tripept 99.6 1.8E-13 3.9E-18 130.1 22.4 379 103-494 51-484 (498)
119 TIGR00880 2_A_01_02 Multidrug 99.6 3.5E-15 7.5E-20 123.7 9.7 138 121-260 2-140 (141)
120 PRK10642 proline/glycine betai 99.6 6.1E-15 1.3E-19 149.0 13.4 171 104-281 277-457 (490)
121 KOG3626 Organic anion transpor 99.6 3.3E-13 7.1E-18 135.1 19.8 346 101-470 120-645 (735)
122 KOG2816 Predicted transporter 99.5 1.1E-11 2.5E-16 121.1 26.3 306 125-470 70-388 (463)
123 PRK09528 lacY galactoside perm 99.5 1.2E-13 2.5E-18 137.1 10.1 142 119-262 264-407 (420)
124 TIGR01299 synapt_SV2 synaptic 99.5 2.4E-13 5.1E-18 140.5 11.7 139 120-262 598-737 (742)
125 PF03092 BT1: BT1 family; Int 99.5 2.8E-12 6.1E-17 126.3 18.5 369 101-501 13-417 (433)
126 TIGR00889 2A0110 nucleoside tr 99.4 3.5E-13 7.7E-18 133.0 10.1 142 119-262 253-406 (418)
127 PF01770 Folate_carrier: Reduc 99.4 6.5E-11 1.4E-15 112.0 22.3 344 101-458 27-386 (412)
128 PRK15011 sugar efflux transpor 99.4 2.2E-12 4.9E-17 126.7 13.1 150 103-260 242-392 (393)
129 TIGR00890 2A0111 Oxalate/Forma 99.4 1.5E-12 3.2E-17 127.4 10.9 144 102-251 229-375 (377)
130 cd06174 MFS The Major Facilita 99.4 3.5E-12 7.6E-17 123.4 11.4 147 101-253 198-347 (352)
131 PRK11551 putative 3-hydroxyphe 99.4 5.6E-12 1.2E-16 124.7 12.3 145 101-251 243-389 (406)
132 PRK05122 major facilitator sup 99.4 9.6E-12 2.1E-16 122.7 13.8 135 120-256 252-387 (399)
133 PF05631 DUF791: Protein of un 99.4 9.2E-11 2E-15 107.9 19.0 149 106-261 62-219 (354)
134 PRK09874 drug efflux system pr 99.3 3.2E-12 6.9E-17 126.6 10.3 137 119-257 260-397 (408)
135 PRK10489 enterobactin exporter 99.3 1.2E-11 2.5E-16 122.8 14.3 155 102-262 247-403 (417)
136 TIGR00899 2A0120 sugar efflux 99.3 1.4E-11 3.1E-16 120.4 13.6 148 104-259 226-374 (375)
137 PRK12382 putative transporter; 99.3 1.7E-11 3.7E-16 120.6 12.5 136 120-257 252-388 (392)
138 PRK03545 putative arabinose tr 99.3 4.9E-11 1.1E-15 117.2 15.5 150 102-259 230-381 (390)
139 TIGR00892 2A0113 monocarboxyla 99.3 1.1E-11 2.3E-16 124.1 10.7 144 102-251 265-414 (455)
140 TIGR00902 2A0127 phenyl propri 99.3 4.7E-11 1E-15 116.8 13.9 140 104-251 231-372 (382)
141 PRK09556 uhpT sugar phosphate 99.3 4.1E-11 8.8E-16 120.6 13.7 143 103-251 284-442 (467)
142 TIGR00900 2A0121 H+ Antiporter 99.3 1.4E-10 3.1E-15 112.8 16.9 163 333-495 7-177 (365)
143 TIGR00879 SP MFS transporter, 99.3 2E-11 4.3E-16 123.6 10.8 156 101-262 307-474 (481)
144 PRK10054 putative transporter; 99.3 3.7E-10 8E-15 110.9 19.3 169 329-499 11-185 (395)
145 PRK11663 regulatory protein Uh 99.2 4.1E-10 8.8E-15 112.2 18.3 153 345-499 43-201 (434)
146 PF07690 MFS_1: Major Facilita 99.2 6E-10 1.3E-14 107.8 18.6 155 336-492 7-167 (352)
147 PRK10473 multidrug efflux syst 99.2 8.5E-10 1.8E-14 108.6 19.5 160 340-501 18-183 (392)
148 PRK03893 putative sialic acid 99.2 4.1E-11 8.8E-16 121.9 10.4 143 101-249 298-444 (496)
149 TIGR00893 2A0114 d-galactonate 99.2 3.5E-10 7.6E-15 111.3 16.5 155 344-500 13-173 (399)
150 PRK11195 lysophospholipid tran 99.2 5.9E-10 1.3E-14 109.4 17.9 169 327-500 5-177 (393)
151 PRK10077 xylE D-xylose transpo 99.2 1.1E-10 2.4E-15 118.2 12.9 156 101-262 294-461 (479)
152 KOG3098 Uncharacterized conser 99.2 1.7E-08 3.7E-13 97.5 26.9 309 120-470 52-410 (461)
153 TIGR00897 2A0118 polyol permea 99.2 1.3E-10 2.7E-15 114.7 12.7 143 101-251 245-394 (402)
154 TIGR00883 2A0106 metabolite-pr 99.2 3.1E-11 6.7E-16 118.8 8.3 139 104-248 246-391 (394)
155 PRK09952 shikimate transporter 99.2 2.2E-10 4.7E-15 114.2 14.3 151 104-261 277-435 (438)
156 PRK10213 nepI ribonucleoside t 99.2 1.6E-09 3.4E-14 106.4 20.1 150 348-499 43-198 (394)
157 TIGR02332 HpaX 4-hydroxyphenyl 99.2 1.5E-09 3.2E-14 107.3 19.9 156 344-501 27-194 (412)
158 TIGR00891 2A0112 putative sial 99.2 6.2E-11 1.3E-15 117.2 9.7 135 103-243 264-401 (405)
159 TIGR00710 efflux_Bcr_CflA drug 99.2 1E-09 2.2E-14 107.7 18.2 153 347-501 27-185 (385)
160 PRK03633 putative MFS family t 99.2 1.3E-10 2.7E-15 113.9 11.6 141 102-251 224-365 (381)
161 PRK10091 MFS transport protein 99.2 1.7E-09 3.6E-14 106.0 19.4 157 342-500 20-182 (382)
162 PRK11646 multidrug resistance 99.2 2.2E-09 4.7E-14 105.7 20.0 165 332-498 17-187 (400)
163 COG2271 UhpC Sugar phosphate p 99.2 1.9E-10 4.2E-15 107.1 11.5 151 346-498 50-208 (448)
164 TIGR00887 2A0109 phosphate:H+ 99.2 7.2E-10 1.6E-14 112.6 16.9 136 124-262 342-492 (502)
165 PRK09705 cynX putative cyanate 99.2 2.7E-10 5.8E-15 111.9 12.8 153 102-262 229-385 (393)
166 TIGR00792 gph sugar (Glycoside 99.2 1.3E-09 2.9E-14 108.9 17.8 116 119-236 259-383 (437)
167 PRK12307 putative sialic acid 99.2 1.4E-09 3E-14 108.4 17.7 140 342-483 35-179 (426)
168 PLN00028 nitrate transmembrane 99.2 4.6E-09 9.9E-14 105.7 21.2 147 348-497 59-219 (476)
169 PRK03699 putative transporter; 99.1 1.8E-10 4E-15 113.2 10.6 149 104-260 232-381 (394)
170 TIGR00924 yjdL_sub1_fam amino 99.1 7.6E-10 1.6E-14 111.0 15.1 158 338-497 23-192 (475)
171 TIGR00895 2A0115 benzoate tran 99.1 3.9E-10 8.5E-15 111.1 12.2 123 101-229 273-396 (398)
172 COG2814 AraJ Arabinose efflux 99.1 5.1E-09 1.1E-13 98.9 18.6 149 347-497 35-189 (394)
173 TIGR00712 glpT glycerol-3-phos 99.1 1.7E-09 3.7E-14 107.9 16.6 152 347-499 49-209 (438)
174 KOG3762 Predicted transporter 99.1 2.3E-09 5.1E-14 102.5 16.3 173 320-494 366-544 (618)
175 PF05977 MFS_3: Transmembrane 99.1 7.4E-10 1.6E-14 110.9 13.5 145 101-251 241-387 (524)
176 PRK10504 putative transporter; 99.1 5.3E-09 1.2E-13 105.6 19.7 152 340-493 25-181 (471)
177 PRK11128 putative 3-phenylprop 99.1 1.1E-09 2.3E-14 107.3 14.2 138 106-251 233-372 (382)
178 PRK11273 glpT sn-glycerol-3-ph 99.1 1.1E-09 2.3E-14 109.8 14.2 145 104-254 280-431 (452)
179 TIGR00711 efflux_EmrB drug res 99.1 3.3E-09 7.1E-14 107.6 17.9 159 340-500 17-181 (485)
180 TIGR00882 2A0105 oligosacchari 99.1 9.7E-10 2.1E-14 108.2 13.5 133 119-253 256-390 (396)
181 TIGR00880 2_A_01_02 Multidrug 99.1 3.1E-09 6.8E-14 87.6 14.5 127 366-494 7-135 (141)
182 PRK15462 dipeptide/tripeptide 99.1 3.6E-09 7.9E-14 104.7 16.8 148 346-494 30-186 (493)
183 PRK15403 multidrug efflux syst 99.1 7.2E-09 1.6E-13 102.4 18.7 151 349-501 40-196 (413)
184 TIGR00881 2A0104 phosphoglycer 99.1 7.4E-10 1.6E-14 108.3 11.7 154 344-499 14-174 (379)
185 TIGR00898 2A0119 cation transp 99.1 1.7E-09 3.6E-14 110.3 14.5 139 120-262 358-498 (505)
186 PF11700 ATG22: Vacuole efflux 99.1 1.5E-09 3.3E-14 107.5 13.6 151 103-260 307-469 (477)
187 PRK11043 putative transporter; 99.1 1.5E-08 3.2E-13 100.1 20.4 149 349-499 30-183 (401)
188 PRK11010 ampG muropeptide tran 99.1 2E-08 4.4E-13 101.3 21.7 180 321-500 8-198 (491)
189 PRK14995 methyl viologen resis 99.1 1.4E-08 3.1E-13 102.8 20.4 156 342-499 23-185 (495)
190 PRK15402 multidrug efflux syst 99.1 1.2E-08 2.6E-13 100.9 18.9 152 348-501 36-193 (406)
191 TIGR00885 fucP L-fucose:H+ sym 99.0 1.4E-08 3E-13 100.0 18.6 129 342-470 20-152 (410)
192 PRK11102 bicyclomycin/multidru 99.0 7.7E-09 1.7E-13 101.2 16.5 151 348-500 14-170 (377)
193 PF06813 Nodulin-like: Nodulin 99.0 9.4E-10 2E-14 98.1 8.9 153 101-262 25-185 (250)
194 PRK10406 alpha-ketoglutarate t 99.0 3.4E-08 7.5E-13 98.4 20.3 132 368-499 74-221 (432)
195 PRK15075 citrate-proton sympor 99.0 2.2E-09 4.8E-14 106.9 11.4 130 102-237 262-398 (434)
196 PRK11902 ampG muropeptide tran 99.0 3.6E-08 7.8E-13 97.3 19.8 166 335-500 9-185 (402)
197 KOG0569 Permease of the major 99.0 3.1E-09 6.6E-14 103.6 11.7 153 102-262 294-458 (485)
198 PF02487 CLN3: CLN3 protein; 99.0 2.9E-07 6.4E-12 87.5 24.6 321 120-469 62-392 (402)
199 TIGR00886 2A0108 nitrite extru 99.0 2.2E-08 4.7E-13 97.6 17.6 116 351-469 28-147 (366)
200 PRK11652 emrD multidrug resist 99.0 4.1E-08 9E-13 96.6 19.1 151 348-500 31-187 (394)
201 TIGR02718 sider_RhtX_FptX side 99.0 7.9E-09 1.7E-13 101.6 13.6 141 105-251 235-384 (390)
202 PF01306 LacY_symp: LacY proto 99.0 4E-09 8.8E-14 100.7 10.7 143 117-261 259-403 (412)
203 TIGR00903 2A0129 major facilit 99.0 3.5E-08 7.6E-13 95.5 17.5 152 346-500 12-169 (368)
204 PRK09584 tppB putative tripept 99.0 3.5E-08 7.6E-13 99.7 18.1 170 321-491 16-195 (500)
205 KOG1330 Sugar transporter/spin 99.0 7.3E-10 1.6E-14 104.3 5.3 142 360-503 71-216 (493)
206 KOG2615 Permease of the major 98.9 3.8E-09 8.3E-14 96.8 9.2 109 360-471 71-179 (451)
207 PRK15034 nitrate/nitrite trans 98.9 2.4E-07 5.2E-12 90.8 22.1 110 354-464 64-179 (462)
208 PRK08633 2-acyl-glycerophospho 98.9 3.6E-09 7.8E-14 119.0 10.7 142 103-250 258-402 (1146)
209 TIGR00901 2A0125 AmpG-related 98.9 5.9E-08 1.3E-12 94.2 17.5 156 343-499 6-181 (356)
210 PRK10207 dipeptide/tripeptide 98.9 4E-08 8.7E-13 98.7 16.3 145 352-497 42-194 (489)
211 TIGR01272 gluP glucose/galacto 98.9 2.6E-08 5.6E-13 94.0 13.6 133 107-248 172-305 (310)
212 TIGR00894 2A0114euk Na(+)-depe 98.9 1.3E-08 2.7E-13 102.7 12.2 134 363-496 82-218 (465)
213 COG2270 Permeases of the major 98.9 8.2E-09 1.8E-13 96.5 9.7 150 105-261 280-431 (438)
214 KOG0253 Synaptic vesicle trans 98.9 5.6E-09 1.2E-13 95.1 8.2 124 128-259 392-519 (528)
215 PTZ00207 hypothetical protein; 98.9 1.1E-07 2.3E-12 96.1 18.0 143 349-492 51-200 (591)
216 TIGR00769 AAA ADP/ATP carrier 98.9 1.1E-05 2.5E-10 79.3 31.6 260 102-395 27-341 (472)
217 KOG3810 Micronutrient transpor 98.9 4.6E-08 1E-12 88.4 13.5 363 106-496 34-420 (433)
218 PRK09848 glucuronide transport 98.9 6.9E-08 1.5E-12 96.7 16.1 123 104-232 255-387 (448)
219 KOG2504 Monocarboxylate transp 98.9 5E-09 1.1E-13 104.5 7.7 152 101-259 321-476 (509)
220 TIGR00806 rfc RFC reduced fola 98.8 1.9E-07 4E-12 90.1 17.6 152 344-498 45-204 (511)
221 PF03825 Nuc_H_symport: Nucleo 98.8 1.2E-07 2.5E-12 92.4 16.4 150 106-261 235-398 (400)
222 PF06963 FPN1: Ferroportin1 (F 98.8 2.7E-06 5.9E-11 82.5 25.6 327 120-468 41-412 (432)
223 PRK06814 acylglycerophosphoeth 98.8 2.6E-08 5.5E-13 111.8 13.1 141 104-250 252-414 (1140)
224 KOG3764 Vesicular amine transp 98.8 2.1E-08 4.6E-13 92.6 10.0 136 360-497 109-247 (464)
225 PRK10133 L-fucose transporter; 98.8 2.9E-07 6.3E-12 91.6 19.1 128 342-469 43-174 (438)
226 KOG0255 Synaptic vesicle trans 98.8 3.6E-08 7.8E-13 100.8 12.8 137 361-500 122-258 (521)
227 TIGR01301 GPH_sucrose GPH fami 98.8 5.4E-07 1.2E-11 89.0 19.7 162 339-500 18-222 (477)
228 KOG4332 Predicted sugar transp 98.8 3.4E-07 7.3E-12 79.9 15.7 340 102-492 61-426 (454)
229 TIGR00805 oat sodium-independe 98.8 4.8E-08 1E-12 101.1 12.6 152 348-499 56-283 (633)
230 COG2223 NarK Nitrate/nitrite t 98.8 1.1E-07 2.4E-12 89.1 12.8 146 103-255 244-398 (417)
231 PRK10429 melibiose:sodium symp 98.8 6.4E-07 1.4E-11 90.3 19.3 111 120-232 269-392 (473)
232 TIGR00896 CynX cyanate transpo 98.8 2.8E-08 6.2E-13 96.3 9.1 127 102-235 221-350 (355)
233 KOG4686 Predicted sugar transp 98.7 4.8E-08 1E-12 85.9 8.7 141 103-251 290-436 (459)
234 PF06609 TRI12: Fungal trichot 98.7 5.4E-07 1.2E-11 90.5 17.2 142 348-492 67-212 (599)
235 COG0477 ProP Permeases of the 98.7 1.2E-07 2.5E-12 89.9 12.1 129 120-250 42-177 (338)
236 COG3104 PTR2 Dipeptide/tripept 98.7 1.2E-07 2.5E-12 91.0 10.1 144 355-498 56-207 (498)
237 KOG0637 Sucrose transporter an 98.7 6.7E-07 1.4E-11 84.5 14.8 125 101-229 55-200 (498)
238 PRK09669 putative symporter Ya 98.7 6.6E-07 1.4E-11 89.5 16.1 114 120-235 267-390 (444)
239 TIGR00926 2A1704 Peptide:H+ sy 98.7 1.8E-06 4E-11 88.8 19.2 146 104-254 14-178 (654)
240 KOG2532 Permease of the major 98.7 3.6E-07 7.7E-12 90.2 13.5 134 363-496 79-215 (466)
241 PF13347 MFS_2: MFS/sugar tran 98.7 2.1E-07 4.5E-12 92.7 12.0 111 120-232 263-383 (428)
242 KOG0252 Inorganic phosphate tr 98.6 2.4E-07 5.3E-12 87.4 10.1 155 101-262 327-501 (538)
243 KOG0254 Predicted transporter 98.6 5.2E-07 1.1E-11 91.9 13.5 137 360-499 92-232 (513)
244 TIGR00939 2a57 Equilibrative N 98.5 4.3E-05 9.3E-10 75.2 24.0 107 361-468 311-428 (437)
245 COG2211 MelB Na+/melibiose sym 98.5 9.4E-06 2E-10 78.8 18.5 112 119-232 274-395 (467)
246 PF03209 PUCC: PUCC protein; 98.4 1.9E-05 4.2E-10 74.5 17.4 145 102-251 233-391 (403)
247 KOG2533 Permease of the major 98.4 9.3E-06 2E-10 80.6 16.0 140 360-501 84-232 (495)
248 COG2807 CynX Cyanate permease 98.4 2.5E-06 5.4E-11 78.5 10.6 151 101-257 231-384 (395)
249 PF13000 Acatn: Acetyl-coenzym 98.4 8.2E-05 1.8E-09 71.7 20.9 265 191-467 137-460 (544)
250 TIGR00788 fbt folate/biopterin 98.4 8.6E-07 1.9E-11 88.8 8.3 121 106-232 281-412 (468)
251 COG0738 FucP Fucose permease [ 98.3 1.4E-05 3.1E-10 74.8 14.4 123 348-470 36-162 (422)
252 KOG3574 Acetyl-CoA transporter 98.3 6.9E-05 1.5E-09 69.3 18.4 321 101-468 53-425 (510)
253 PF06779 DUF1228: Protein of u 98.3 5.8E-07 1.3E-11 64.6 3.7 70 101-176 15-84 (85)
254 PRK11462 putative transporter; 98.3 3.3E-05 7.2E-10 77.4 17.3 110 120-231 266-385 (460)
255 COG3202 ATP/ADP translocase [E 98.3 0.0015 3.2E-08 63.2 26.9 255 102-393 47-358 (509)
256 PF00083 Sugar_tr: Sugar (and 98.3 1.3E-08 2.8E-13 102.2 -7.5 154 101-262 276-440 (451)
257 KOG3762 Predicted transporter 98.2 8.4E-07 1.8E-11 85.5 3.8 134 117-252 406-541 (618)
258 PF05978 UNC-93: Ion channel r 98.1 2E-05 4.2E-10 65.0 9.5 108 120-230 40-147 (156)
259 PF03219 TLC: TLC ATP/ADP tran 98.1 0.0026 5.7E-08 63.2 25.8 284 36-392 17-354 (491)
260 PF06813 Nodulin-like: Nodulin 98.1 0.0001 2.2E-09 66.1 13.7 120 349-470 26-153 (250)
261 KOG1237 H+/oligopeptide sympor 97.8 0.0017 3.7E-08 66.0 19.0 146 101-251 61-238 (571)
262 KOG2816 Predicted transporter 97.8 0.00021 4.5E-09 70.6 11.7 133 366-503 71-206 (463)
263 KOG2325 Predicted transporter/ 97.8 0.00039 8.4E-09 68.0 12.6 141 360-501 74-234 (488)
264 PF05631 DUF791: Protein of un 97.7 0.007 1.5E-07 56.6 19.9 146 354-502 63-222 (354)
265 KOG2563 Permease of the major 97.6 0.0043 9.4E-08 59.4 17.0 108 360-467 82-195 (480)
266 PF03092 BT1: BT1 family; Int 97.4 0.0026 5.5E-08 63.2 13.1 150 349-498 14-177 (433)
267 TIGR00926 2A1704 Peptide:H+ sy 97.4 0.0044 9.5E-08 64.3 14.8 126 370-495 36-180 (654)
268 PF12832 MFS_1_like: MFS_1 lik 97.4 0.00024 5.2E-09 50.8 3.9 53 101-159 23-75 (77)
269 PF05978 UNC-93: Ion channel r 97.4 0.0069 1.5E-07 50.1 12.9 102 365-469 45-146 (156)
270 PF00854 PTR2: POT family; In 97.3 0.00072 1.6E-08 65.9 8.1 104 150-253 2-118 (372)
271 TIGR00769 AAA ADP/ATP carrier 97.3 0.056 1.2E-06 53.7 20.6 142 329-470 7-187 (472)
272 PF02487 CLN3: CLN3 protein; 97.3 0.0039 8.5E-08 59.8 12.2 107 120-232 284-395 (402)
273 KOG1479 Nucleoside transporter 97.3 0.015 3.3E-07 55.5 15.6 56 413-468 344-399 (406)
274 PF01733 Nucleoside_tran: Nucl 97.1 0.00015 3.3E-09 68.3 0.7 107 362-468 187-304 (309)
275 KOG3880 Predicted small molecu 96.9 0.011 2.4E-07 53.4 10.8 135 120-261 65-202 (409)
276 KOG3098 Uncharacterized conser 96.9 0.014 3.1E-07 57.1 12.2 107 120-227 282-407 (461)
277 PF12832 MFS_1_like: MFS_1 lik 96.8 0.012 2.6E-07 42.1 8.4 63 335-397 10-75 (77)
278 PF06963 FPN1: Ferroportin1 (F 96.8 0.0085 1.8E-07 58.6 9.7 121 106-232 286-416 (432)
279 PF07672 MFS_Mycoplasma: Mycop 96.8 0.024 5.2E-07 50.4 11.4 48 204-251 2-55 (267)
280 COG0477 ProP Permeases of the 96.6 0.08 1.7E-06 49.5 14.8 110 361-470 43-154 (338)
281 PF01770 Folate_carrier: Reduc 96.2 0.26 5.5E-06 47.7 15.7 125 371-498 55-183 (412)
282 PRK03612 spermidine synthase; 96.1 0.075 1.6E-06 53.9 11.9 131 117-251 50-190 (521)
283 KOG3097 Predicted membrane pro 95.7 0.61 1.3E-05 43.1 14.8 100 125-227 66-180 (390)
284 PF00854 PTR2: POT family; In 95.5 0.068 1.5E-06 52.1 8.7 109 388-496 2-122 (372)
285 PRK03612 spermidine synthase; 95.4 0.91 2E-05 46.2 16.5 54 416-470 114-167 (521)
286 PF03219 TLC: TLC ATP/ADP tran 95.3 3.7 8.1E-05 41.3 20.3 101 370-470 72-202 (491)
287 KOG0637 Sucrose transporter an 94.9 0.064 1.4E-06 51.8 6.2 123 348-470 55-201 (498)
288 PF03137 OATP: Organic Anion T 94.7 0.005 1.1E-07 62.6 -1.6 152 348-499 26-252 (539)
289 KOG3626 Organic anion transpor 93.8 0.21 4.5E-06 51.8 7.6 135 368-502 143-348 (735)
290 TIGR00939 2a57 Equilibrative N 93.6 3 6.5E-05 41.4 15.1 111 118-231 308-431 (437)
291 COG3202 ATP/ADP translocase [E 92.9 11 0.00023 37.5 17.7 142 329-470 27-206 (509)
292 KOG1479 Nucleoside transporter 91.5 1.1 2.3E-05 43.3 8.5 112 117-231 282-402 (406)
293 KOG2601 Iron transporter [Inor 91.5 2.8 6.2E-05 39.7 10.9 38 431-468 405-442 (503)
294 KOG2881 Predicted membrane pro 90.9 6.1 0.00013 35.1 11.6 31 373-403 256-286 (294)
295 KOG3574 Acetyl-CoA transporter 89.8 12 0.00027 35.8 13.4 124 342-467 48-188 (510)
296 KOG4332 Predicted sugar transp 88.6 5.4 0.00012 36.1 9.8 131 120-251 285-424 (454)
297 PF01733 Nucleoside_tran: Nucl 88.4 0.16 3.5E-06 47.9 0.5 110 121-231 186-307 (309)
298 PF06779 DUF1228: Protein of u 87.6 3 6.6E-05 30.3 6.4 64 347-410 14-80 (85)
299 KOG3880 Predicted small molecu 87.4 1.8 3.9E-05 39.8 6.3 78 155-232 325-402 (409)
300 COG4262 Predicted spermidine s 86.1 11 0.00023 35.6 10.5 107 117-227 43-158 (508)
301 KOG3810 Micronutrient transpor 83.4 4.4 9.6E-05 38.1 6.9 97 117-215 271-369 (433)
302 PF07672 MFS_Mycoplasma: Mycop 81.8 20 0.00043 32.5 10.1 103 120-224 144-255 (267)
303 COG1230 CzcD Co/Zn/Cd efflux s 74.2 75 0.0016 29.5 12.2 29 444-472 154-183 (296)
304 KOG1237 H+/oligopeptide sympor 72.3 24 0.00052 36.5 9.2 126 368-493 84-241 (571)
305 COG5336 Uncharacterized protei 68.3 8.4 0.00018 29.0 3.6 43 117-160 42-84 (116)
306 PF06912 DUF1275: Protein of u 63.9 1E+02 0.0022 27.0 11.6 17 124-140 53-69 (209)
307 COG5336 Uncharacterized protei 62.9 24 0.00052 26.7 5.0 26 369-394 54-80 (116)
308 TIGR00844 c_cpa1 na(+)/h(+) an 60.8 2.5E+02 0.0053 30.4 19.2 34 214-247 107-141 (810)
309 PF11299 DUF3100: Protein of u 58.0 7 0.00015 34.2 1.9 101 100-228 126-226 (241)
310 PF13000 Acatn: Acetyl-coenzym 51.7 1.3E+02 0.0028 30.4 9.5 51 173-223 406-456 (544)
311 PF03547 Mem_trans: Membrane t 51.2 1.7E+02 0.0036 28.6 10.7 18 368-385 6-23 (385)
312 PF11947 DUF3464: Protein of u 47.7 72 0.0016 26.2 6.0 36 427-462 109-144 (153)
313 TIGR02230 ATPase_gene1 F0F1-AT 45.5 49 0.0011 24.9 4.4 33 128-161 53-85 (100)
314 PRK10263 DNA translocase FtsK; 45.0 5E+02 0.011 30.0 13.5 21 366-386 61-81 (1355)
315 PRK15049 L-asparagine permease 43.5 3.3E+02 0.0072 27.8 11.7 11 146-156 102-112 (499)
316 PF03547 Mem_trans: Membrane t 43.3 3.2E+02 0.0069 26.5 13.5 19 215-233 102-120 (385)
317 PF06027 DUF914: Eukaryotic pr 43.3 3E+02 0.0066 26.3 14.7 12 375-386 185-196 (334)
318 PF01102 Glycophorin_A: Glycop 43.1 17 0.00037 28.5 1.8 12 492-503 84-95 (122)
319 KOG3097 Predicted membrane pro 43.0 1.1E+02 0.0023 29.1 7.1 69 368-440 69-138 (390)
320 TIGR02230 ATPase_gene1 F0F1-AT 40.7 1.6E+02 0.0034 22.3 6.4 30 371-400 57-86 (100)
321 COG4769 Predicted membrane pro 39.7 24 0.00051 29.1 2.1 54 124-185 80-133 (181)
322 KOG4830 Predicted sugar transp 36.7 1.7E+02 0.0037 26.7 7.1 77 392-468 273-351 (412)
323 PF11947 DUF3464: Protein of u 34.7 79 0.0017 26.0 4.4 51 170-223 95-145 (153)
324 PF02694 UPF0060: Uncharacteri 34.4 87 0.0019 23.8 4.2 49 120-170 57-105 (107)
325 TIGR01667 YCCS_YHJK integral m 33.6 3.1E+02 0.0068 29.4 9.8 54 136-189 42-98 (701)
326 PF06645 SPC12: Microsomal sig 32.8 1.8E+02 0.0039 20.6 5.8 41 209-251 9-49 (76)
327 KOG2765 Predicted membrane pro 32.8 1.9E+02 0.0041 27.8 7.0 18 381-398 208-225 (416)
328 PF08611 DUF1774: Fungal prote 32.4 1.6E+02 0.0035 22.0 5.3 19 475-493 52-70 (97)
329 PF13536 EmrE: Multidrug resis 31.6 2.4E+02 0.0052 21.6 8.0 22 381-402 83-104 (113)
330 TIGR01666 YCCS hypothetical me 31.0 3.3E+02 0.0071 29.2 9.4 53 137-189 43-98 (704)
331 PF12805 FUSC-like: FUSC-like 30.7 1.6E+02 0.0035 27.2 6.6 37 153-189 3-40 (284)
332 PTZ00370 STEVOR; Provisional 30.6 69 0.0015 29.3 3.7 27 478-504 260-286 (296)
333 PF02990 EMP70: Endomembrane p 30.6 3.7E+02 0.008 27.6 9.6 25 363-387 303-327 (521)
334 PF02694 UPF0060: Uncharacteri 30.1 2.5E+02 0.0055 21.4 6.3 49 359-407 56-104 (107)
335 COG1268 BioY Uncharacterized c 30.0 1.1E+02 0.0023 26.2 4.7 24 123-148 88-111 (184)
336 PF07760 DUF1616: Protein of u 29.7 2.1E+02 0.0045 26.6 7.1 61 175-236 22-82 (287)
337 PRK02237 hypothetical protein; 27.9 1.4E+02 0.0029 22.9 4.3 49 120-170 59-107 (109)
338 PF06800 Sugar_transport: Suga 27.0 4.1E+02 0.009 24.4 8.1 128 385-512 10-138 (269)
339 KOG4112 Signal peptidase subun 26.9 1.2E+02 0.0025 22.3 3.6 32 207-238 22-53 (101)
340 PF10785 NADH-u_ox-rdase: NADH 25.4 1.5E+02 0.0033 21.6 4.2 43 128-172 29-78 (86)
341 PF02632 BioY: BioY family; I 24.4 1.2E+02 0.0025 25.0 3.8 26 123-150 59-84 (148)
342 PF06645 SPC12: Microsomal sig 24.1 1.5E+02 0.0032 21.1 3.8 30 463-492 22-51 (76)
343 COG4262 Predicted spermidine s 23.9 6.7E+02 0.015 24.3 13.8 27 413-439 106-132 (508)
344 TIGR02865 spore_II_E stage II 23.5 9.9E+02 0.021 26.1 14.6 24 418-441 189-212 (764)
345 PF10183 ESSS: ESSS subunit of 23.3 79 0.0017 24.1 2.5 31 232-262 55-85 (105)
346 TIGR03802 Asp_Ala_antiprt aspa 22.9 6.9E+02 0.015 26.0 10.0 10 476-485 164-173 (562)
347 PF04550 Phage_holin_2: Phage 22.5 3.1E+02 0.0067 20.1 5.1 34 170-203 29-62 (89)
348 PRK10697 DNA-binding transcrip 22.0 49 0.0011 25.8 1.1 17 248-264 53-69 (118)
349 COG2836 Uncharacterized conser 21.6 5.8E+02 0.013 22.7 12.6 37 360-396 167-206 (232)
350 COG1971 Predicted membrane pro 21.0 5.4E+02 0.012 22.2 14.0 37 368-404 148-184 (190)
351 PF12670 DUF3792: Protein of u 20.6 4.1E+02 0.0089 20.6 9.5 30 365-394 42-71 (116)
352 PF11023 DUF2614: Protein of u 20.5 4.1E+02 0.0089 20.5 5.7 6 384-389 8-13 (114)
353 PF11368 DUF3169: Protein of u 20.2 6.5E+02 0.014 22.7 13.7 24 207-230 9-32 (248)
No 1
>TIGR00898 2A0119 cation transport protein.
Probab=100.00 E-value=1.1e-46 Score=382.76 Aligned_cols=459 Identities=29% Similarity=0.522 Sum_probs=374.8
Q ss_pred cCCChhHHHHHHHHHHHHHHHHHHHhhhhccccCCccccc--CCcccc-------------cCCcccccc----------
Q 039541 35 ANLGLPQFIQVILISLLLIFESQQTFISVYTDEEPTWHCI--NNTTTC-------------SSSSDICTL---------- 89 (521)
Q Consensus 35 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~p~~~c~--~~~~~~-------------~~~~~~c~~---------- 89 (521)
++++++|+.+++++++..+..++......+....|+|+|. +.++.. +.+.+.|..
T Consensus 1 g~~g~~q~~~~~~~~~~~~~~~~~~~~~~f~~~~p~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (505)
T TIGR00898 1 GEFGPFQRRTFLLLALPIALLAFHFVLIVFLGATPEHHCRLPDAANLSSRCELNLTLPRLPDGRPESCLRFMVDQWANPS 80 (505)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCcccCCCCcccCChHhHhceeccCCCCCCCCCCccccccchhhhc
Confidence 4689999999999999999999999999999999999997 111100 011122321
Q ss_pred -------------------ccCcceecC-CCCcceeeecceeeCCccccchhhHHHHHHHHHHhhhhhhhccccCCCCch
Q 039541 90 -------------------SKSAWAWDR-PSDTTIISDWSLECAGSSILSGLPSSCFFIGCLLGGLALSTLGDSSSLGRK 149 (521)
Q Consensus 90 -------------------~~~~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~s~~~lg~~i~~~~~g~l~dr~~~Grr 149 (521)
..+.|.|+. +..|.+.+|||++|++. .+.+++.+++.+|..++++++|+++|| +|||
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~~l~c~~~-~~~~~~~s~~~~g~~~g~~~~g~l~Dr--~Grr 157 (505)
T TIGR00898 81 LLGCEPLKLSDLGLAATEPCLDGWEYSYDTFSSTIVTEWDLVCEDA-WKVDLTQSCFFVGVLLGSFVFGYLSDR--FGRK 157 (505)
T ss_pred ccccccchhcccCCCCCCCCCCCcEecCCcccccEEEEecceechH-HHHHHHHHHHHHHHHHHHHhHHHhhhh--ccch
Confidence 123577875 45799999999997666 777999999999999999999999999 9999
Q ss_pred HHHHHHHHHHHHHHHHHhccccHHHHHHHHHHhhccchhhHhhhhhheeeeecCcchhHHHHHHHHHHHHHHHHHHHHHH
Q 039541 150 KLLFLSCFAMSITALATIFANNIWIYSTIRFVAGFFRAPIMTSVIVLLSEMVSKRWRGQVVIIGFTFFSFGLVSLPAVAY 229 (521)
Q Consensus 150 ~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~i~~~i~~ 229 (521)
++++++.++.+++.++.++++|++.+++.|++.|++.+...+...+++.|++|+++|+++.++...+..+|.++++.+++
T Consensus 158 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~ 237 (505)
T TIGR00898 158 KVLLLSTLVTAVSGVLTAFSPNYTVFLVFRLLVGMGIGGIWVQAVVLNTEFLPKKQRAIVGTLIQVFFSLGLVLLPLVAY 237 (505)
T ss_pred HHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHhhccchHHHHHHHhheecChhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999977
Q ss_pred hhcCCchhHHHHHHHHHHHHHHhhhceeeecchhHHHhcCCHHHHHHHHHHHhhhcCCCCCCCccccccCCCCCccccCC
Q 039541 230 LSRGSSWKMLYVWTSIPSIVCCIIIYPFISESPRWLFIHGHEAEAMAVLKRLASRSNYQSDYGLESCCLSNMPPKAKNVI 309 (521)
Q Consensus 230 ~~~~~~wr~~f~~~~~~~~~~~~~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (521)
++. +||+.|++.+++.++.. +..+++||+|+|+..+++.+++.+.+++..+ .|+....... .....+++.
T Consensus 238 ~~~--~wr~~~~~~~i~~~~~~-~~~~~~~esp~~l~~~~~~~~a~~~l~~~~~-~~~~~~~~~~----~~~~~~~~~-- 307 (505)
T TIGR00898 238 FIP--DWRWLQLAVSLPTFLFF-LLSWFVPESPRWLISQGRIEEALKILQRIAK-INGKKLPAEV----LSLSLEKDL-- 307 (505)
T ss_pred Hhh--HHHHHHHHHHHHHHHHH-HHHHhcCCChHHHHHCCCHHHHHHHHHHHHH-HcCCCCCHHH----Hhhhhhhhh--
Confidence 765 49999999998888777 4557899999999999999998888888765 4443211100 000000000
Q ss_pred CcccccccHHHHhccHHHHHHHHHHHHHHHHHHHHHHhHHhhccCCCccHHHHHHHHHHHhHhHHHHHHHHHhhcCCchH
Q 039541 310 PKLDLYSSLKDLFNRKWALRRLLTIMALAFGIGVVYFGLLLGVGNLSFNIYLSLAFNGLLDIPAYLLTFILIERWSRKSS 389 (521)
Q Consensus 310 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~ 389 (521)
+....+.++++++++|.++...+.....++.....+|..+.+.+..+.+......+.++..+++.++.+++.||+|||+.
T Consensus 308 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~l~dr~grr~~ 387 (505)
T TIGR00898 308 SSSKKQYSFLDLFRTPNLRKTTLCLMMLWFTTAFSYYGLVLDLGNLGGNIYLDLFISGLVELPAKLITLLLIDRLGRRYT 387 (505)
T ss_pred hhccCCCcHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHhccccccCCChHHHHHHHHHHHHHHHHHHHHHHHHhCCHHH
Confidence 00111347889999999888888888888888888888888888888777777778888899999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHHHHHhhccccCchhhhhhhHHHHHhhhhhhhHHHHHHH
Q 039541 390 ILTFCILSGTCSAICVAIGDEQEVLQIGLELASFFSACVAFNVLLVFGTELFTTCVRNSTTSLVRQAVNLGAAFSPVLIS 469 (521)
Q Consensus 390 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~ 469 (521)
+.++.++.+++++++.+.+....+...+..++.+++.+..++..+.+..|.+|++.|+++.|+.+....+|++++|++.+
T Consensus 388 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~ig~~i~p~i~~ 467 (505)
T TIGR00898 388 MAASLLLAGVALLLLLFVPVDLYFLRTALAVLGKFGITSAFQMVYLYTAELYPTVVRNLGVGVCSTMARVGSIISPFLVY 467 (505)
T ss_pred HHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHhcccccHHHHhhhHhHHHHHHHHHHHHHhHHHH
Confidence 99999888888877776654432344555666677778888899999999999999999999999999999999999998
Q ss_pred hhccchhHHHHHHHHHHHHHhHhhhccccCCCCCCCc
Q 039541 470 AGRQNEFLSFGVFGLVVFCFGFFVVFLPETIGVTLCD 506 (521)
Q Consensus 470 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 506 (521)
....+...++.+++++.+++.+..+++||++++++++
T Consensus 468 ~~~~~~~~~~~~~~~~~~~~~~~~~~lpet~~~~l~~ 504 (505)
T TIGR00898 468 LGEKWLFLPLVLFGGLALLAGILTLFLPETKGVPLPE 504 (505)
T ss_pred HHHHHHhhHHHHHHHHHHHHHHHHHcCcCCCCCCCCC
Confidence 5555567778888888888878788889998887654
No 2
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=100.00 E-value=8.6e-44 Score=363.79 Aligned_cols=423 Identities=18% Similarity=0.280 Sum_probs=333.2
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHHhhhhccccCCcccccCCcccccCCccccccccCcceecCCCCcceeeecceeeCCc
Q 039541 36 NLGLPQFIQVILISLLLIFESQQTFISVYTDEEPTWHCINNTTTCSSSSDICTLSKSAWAWDRPSDTTIISDWSLECAGS 115 (521)
Q Consensus 36 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~p~~~c~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 115 (521)
..++++|.++++++++.+..+++...+++. +|.+.++++++..+.
T Consensus 160 ~~~~~~~~l~~i~~l~~~~~g~d~~~is~i-----------------------------------lp~i~~~~gls~~~~ 204 (742)
T TIGR01299 160 GHGRFQWALFFVLGLALMADGVEVFVVGFV-----------------------------------LPSAEKDLCIPDSGK 204 (742)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------------------------------HHHHHHHhCCCHHHH
Confidence 567899999999999999999999999999 999999999998666
Q ss_pred cccchhhHHHHHHHHHHhhhhhhhccccCCCCchHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHhhccchhhHhhhhh
Q 039541 116 SILSGLPSSCFFIGCLLGGLALSTLGDSSSLGRKKLLFLSCFAMSITALATIFANNIWIYSTIRFVAGFFRAPIMTSVIV 195 (521)
Q Consensus 116 ~~~~~~~~s~~~lg~~i~~~~~g~l~dr~~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~ 195 (521)
+++.+++++|.+++++++|+++|| +|||+++++++++.++++++++++++++.++++|++.|++.|+..+...+
T Consensus 205 ----g~l~s~~~lG~iiG~li~G~LsDR--~GRR~~lii~lil~~i~~ll~afa~s~~~llv~R~l~G~g~g~~~p~~~~ 278 (742)
T TIGR01299 205 ----GMLGLIVYLGMMVGAFFWGGLADK--LGRKQCLLICLSVNGFFAFFSSFVQGYGFFLFCRLLSGFGIGGAIPIVFS 278 (742)
T ss_pred ----HHHHHHHHHHHHHHHHHHHHHHHH--hCcHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999 99999999999999999999999999999999999999999999999999
Q ss_pred heeeeecCcchhHHHHHHHHHHHHHHHHHHHHHH-hhc-------------CCchhHHHHHHHHHHHHHHhhhceeeecc
Q 039541 196 LLSEMVSKRWRGQVVIIGFTFFSFGLVSLPAVAY-LSR-------------GSSWKMLYVWTSIPSIVCCIIIYPFISES 261 (521)
Q Consensus 196 ~i~~~~~~~~rg~~~~~~~~~~~~G~~i~~~i~~-~~~-------------~~~wr~~f~~~~~~~~~~~~~~~~~~~es 261 (521)
++.|++|+++|++.++++..++.+|.++++.+++ ++. ..+||+.+++.+++.++.+ +.++++|||
T Consensus 279 ~isE~~p~~~Rg~~~g~~~~~~~iG~ila~~la~~il~~~G~~~~~g~~~~~~gWR~l~~i~~lp~ll~l-l~~~~lPES 357 (742)
T TIGR01299 279 YFAEFLAQEKRGEHLSWLCMFWMIGGIYAAAMAWAIIPHYGWSFQMGSAYQFHSWRVFVIVCAFPCVFAI-GALTFMPES 357 (742)
T ss_pred HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhccccccccccHHHHHHHHHHHHHHHH-HHHHHcCCC
Confidence 9999999999999999999999999999988743 222 2479999999888877766 777889999
Q ss_pred hhHHHhcCCHHHHHHHHHHHhhhcCCCCCC-Ccccc-----cc----CCCCCccccCCC--------c----ccccccHH
Q 039541 262 PRWLFIHGHEAEAMAVLKRLASRSNYQSDY-GLESC-----CL----SNMPPKAKNVIP--------K----LDLYSSLK 319 (521)
Q Consensus 262 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-----~~----~~~~~~~~~~~~--------~----~~~~~~~~ 319 (521)
|+|+..+++.+++.+.++++.+ .|..... +.... +. ++....++.... . ...+.+++
T Consensus 358 PrwL~~~gr~~eA~~iL~~i~~-~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 436 (742)
T TIGR01299 358 PRFFLENGKHDEAWMILKLIHD-TNMRAKGHPEKVFSVNHIKTIHQEDELIEIESDTGTWYQRCFVRALSEGGGIWGNFL 436 (742)
T ss_pred HHHHHHCCCHHHHHHHHHHHhc-CCCCCcCchhHHHHHHHHHHhhhhhhhhcccccccchhhcchhhhhhhhhhHHHHHH
Confidence 9999999999999999999866 5543210 00000 00 000000000000 0 00112356
Q ss_pred HHhccHHHHHHHHHHHHHHHHHHHHHHhHHhhccCC--------------------------------------------
Q 039541 320 DLFNRKWALRRLLTIMALAFGIGVVYFGLLLGVGNL-------------------------------------------- 355 (521)
Q Consensus 320 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------------------------------- 355 (521)
++++.+ +++.++...+.|++..+.||.+..+++..
T Consensus 437 ~lf~~~-~~~~tl~l~~~wf~~~~~yygl~~w~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 515 (742)
T TIGR01299 437 RCFNPE-VREITIKLMGVWFTLSFGYYGLSVWFPDMIKHLQADDYAALTKNFPGDKVAHFSFNFTLENQIHRGGEYDNDK 515 (742)
T ss_pred HHcCcc-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccchhccccccchhhhhccccccccch
Confidence 666554 56777777888888877777765443210
Q ss_pred --Cc----------------------------------------------------------------------------
Q 039541 356 --SF---------------------------------------------------------------------------- 357 (521)
Q Consensus 356 --~~---------------------------------------------------------------------------- 357 (521)
+.
T Consensus 516 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~ 595 (742)
T TIGR01299 516 FIGLKFKSVSFEDSLFEECTFDDVTSSNTFFKNCTFIDTLFENTDFEEYKFIDSEFQNCSFLHNKEGCPIDFDGDDEGAY 595 (742)
T ss_pred hhcccccccccccccccccceeeccccchhhhccchhhhhccccchhhhhhhhhhhhhccccccCCccCccCCccchhHH
Confidence 00
Q ss_pred cHHHHHHHHHHHhHhHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 039541 358 NIYLSLAFNGLLDIPAYLLTFILIERWSRKSSILTFCILSGTCSAICVAIGDEQEVLQIGLELASFFSACVAFNVLLVFG 437 (521)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 437 (521)
..+....+.+++.+++.+++++++||+|||+++.++.++.+++++++.+.... ...++..++.+++.++.++....++
T Consensus 596 ~~~~~~~l~~l~~i~G~il~g~L~Dr~GRr~~l~~~~~lsai~~ll~~~~~s~--~~ll~~~~l~g~~~~~~~~~~~a~~ 673 (742)
T TIGR01299 596 MIYFVNFLGTLAVLPGNIVSALLMDKIGRLRMLAGSMVLSCISCFFLSFGNSE--SAMIALLCLFGGLSIAAWNALDVLT 673 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHccH--HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 01222345567888999999999999999999999999999988887766543 3445555667777778889999999
Q ss_pred ccccCchhhhhhhHHHHHhhhhhhhHHHHHHHh-hccchhHHHHHHHHHHHHHhHhhhccccCCCCCC
Q 039541 438 TELFTTCVRNSTTSLVRQAVNLGAAFSPVLISA-GRQNEFLSFGVFGLVVFCFGFFVVFLPETIGVTL 504 (521)
Q Consensus 438 ~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 504 (521)
+|++|++.|++++|+.+....+|++++|++.+. ...+...++++++++.++++++.+++||++++.+
T Consensus 674 aEl~Pt~~Rgta~Gi~~~~~rlGaiigp~i~g~L~~~~~~~pf~i~a~~lll~~ll~~~LPET~~~~l 741 (742)
T TIGR01299 674 VELYPSDKRATAFGFLNALCKAAAVLGILIFGSFVGITKAAPILFASAALACGGLLALKLPDTRGQVL 741 (742)
T ss_pred HHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhCCCCccccc
Confidence 999999999999999999999999999999875 3334566777888887777777777899887653
No 3
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=100.00 E-value=1e-40 Score=296.84 Aligned_cols=430 Identities=19% Similarity=0.275 Sum_probs=353.1
Q ss_pred ChHHHHHHhhcCCChhHHHHHHHHHHHHHHHHHHHhhhhccccCCcccccCCcccccCCccccccccCcceecCCCCcce
Q 039541 25 SLDEMIEQNLANLGLPQFIQVILISLLLIFESQQTFISVYTDEEPTWHCINNTTTCSSSSDICTLSKSAWAWDRPSDTTI 104 (521)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~p~~~c~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~i 104 (521)
..||..+.. +++++||........+.+-+.+.....+.+ .|..
T Consensus 62 tv~ea~~ai--gfgrfq~yl~~~ag~gwmad~m~~m~~s~i-----------------------------------~~~l 104 (528)
T KOG0253|consen 62 TVDEAMNAI--GFGRFQWYLFFVAGMGWMADAMEMMLLSLI-----------------------------------LPAL 104 (528)
T ss_pred eehhhhhhc--CcccchhhHHHHhhhHHHHHHHHHHHHHHH-----------------------------------HHHH
Confidence 445666653 789999999999999999999999888888 8999
Q ss_pred eeecceeeCCccccchhhHHHHHHHHHHhhhhhhhccccCCCCchHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHhhc
Q 039541 105 ISDWSLECAGSSILSGLPSSCFFIGCLLGGLALSTLGDSSSLGRKKLLFLSCFAMSITALATIFANNIWIYSTIRFVAGF 184 (521)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~s~~~lg~~i~~~~~g~l~dr~~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~ 184 (521)
.+.++.+..+. +++......|..+++..+|..+|+ +|||+.+.+..+..++...+.++++|+..+.+.|.+.|+
T Consensus 105 ~~~w~~s~~q~----~llt~~v~~gmllga~~w~l~~d~--~grr~~f~~T~l~t~v~~~is~~spnf~~L~~f~~l~~~ 178 (528)
T KOG0253|consen 105 DEVWGPSEGQA----PLLTLSVFLGMLVGAMVWGLSADT--IGRRKGFNLTFLVTGVFGVISGASPNFASLCVFRALWGF 178 (528)
T ss_pred Hhhhchhhhhh----hHHHHHHHhhhhhhhhhhheehhh--hhcchhhhhhHHHHHHHHHhhcCCCCeehhhHHHHHHhc
Confidence 99999888776 999999999999999999999999 999999999999999999999999999999999999999
Q ss_pred cchhhHhhhhhheeeeecCcchhHHHHHHHHHHHHHHHHHHHHHH-hhcCCchhHHHHHHHHHHHHHHhhhceeeecchh
Q 039541 185 FRAPIMTSVIVLLSEMVSKRWRGQVVIIGFTFFSFGLVSLPAVAY-LSRGSSWKMLYVWTSIPSIVCCIIIYPFISESPR 263 (521)
Q Consensus 185 ~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~i~~~i~~-~~~~~~wr~~f~~~~~~~~~~~~~~~~~~~esp~ 263 (521)
|.|+ .|...++-.|..|..+|+..+-+. ..+.+|.++...+++ ...++||||.....+.+..+.+ ...+++|||||
T Consensus 179 g~gg-~pv~~~~yle~lp~~~r~~~~V~~-~~waig~v~ea~law~vm~~~gwr~~l~~~~~pl~~~a-~f~~w~~ESpR 255 (528)
T KOG0253|consen 179 GVGG-LPVDSAIYLEFLPSSHRWLLTVMS-FFWAIGQVFEALLAWGVMSNFGWRYLLFTSSTPLMFAA-RFLVWVYESPR 255 (528)
T ss_pred cCCC-ccHhHHHHHHhccCcCCCcchhHH-HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhHHHHHH-HHHhhcccCcc
Confidence 9998 888889999999999999988888 999999999988865 4577899999888887777777 77788999999
Q ss_pred HHHhcCCHHHHHHHHHHHhhhcCCCCCCCccc-------cccCCCCCccccCCCcccccccHHHHhccHHHHHHHHHHHH
Q 039541 264 WLFIHGHEAEAMAVLKRLASRSNYQSDYGLES-------CCLSNMPPKAKNVIPKLDLYSSLKDLFNRKWALRRLLTIMA 336 (521)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 336 (521)
+...+++.+++.+.++++++ .|+.+-..-.. .|.++...++...+..++...+...++. |++++..+....
T Consensus 256 f~~~~G~~~kAletL~kiAr-mNg~qlplgvl~~s~~~~~e~e~~~~~~~~~~a~ke~rg~~~nLls-p~lrkttlllw~ 333 (528)
T KOG0253|consen 256 FYLAKGDDYKALETLHKIAR-MNGKQLPLGVLESSAIDRQEQEESDLDDSKSSAAKEVRGGTTNLLS-PKLRKTTLLLWR 333 (528)
T ss_pred hhhhcCChHHHHHHHHHHHH-hcCCCCCcceeeeehhhhhhhhhhchhhhhhccccccccchHhhcC-hHHHHHHHHHHH
Confidence 99999999999999999988 88774322211 1111111111111122222345555554 668888999999
Q ss_pred HHHHHHHHHHhHHhhccC---C------------------------CccHHHHHHHHHHHhHhHHHHHHHHHhhcCCchH
Q 039541 337 LAFGIGVVYFGLLLGVGN---L------------------------SFNIYLSLAFNGLLDIPAYLLTFILIERWSRKSS 389 (521)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~---~------------------------~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~ 389 (521)
.+++..+.||+..+...+ . ....+.-.++..+..++|.++.++++||+|||+.
T Consensus 334 iwfgnafsyyg~VLlttelfqsgd~c~~~~r~~p~e~e~~~~c~~s~~~dYrdllitslaefPGlLIt~~iverlGRKkT 413 (528)
T KOG0253|consen 334 IWFGNAFSYYGSVLLTTELFQSGDACPLYNRFLPTELETRANCPLSVAKDYRDLLITSLAEFPGLLITGVIVERLGRKKT 413 (528)
T ss_pred HHHhhHHHHHHHHHHHHHHHhccCccccchhcchhHHHhhhcCCccchhHHHHHHHHHHhhCCchhHHHHHHHHhcchhH
Confidence 999999888876442211 0 0112344567788999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHHHHHhhccccCchhhhhhhHHHHHhhhhhhhHHHHHHH
Q 039541 390 ILTFCILSGTCSAICVAIGDEQEVLQIGLELASFFSACVAFNVLLVFGTELFTTCVRNSTTSLVRQAVNLGAAFSPVLIS 469 (521)
Q Consensus 390 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~ 469 (521)
+...+++++++.+.+...... ....+..+..-++..+.+...++|..|++|+..|+++.|.+...+.+|+++.|++.-
T Consensus 414 Mal~l~~f~iflfll~~c~~r--n~~tvllf~arafisg~fqvaYvYtPEVyPTavRatgvGtcSsmaRIggI~~p~iA~ 491 (528)
T KOG0253|consen 414 MALSLILFGIFLFLLTTCKTR--NAYTVLLFTARAFISGAFQVAYVYTPEVYPTAVRATGVGTCSSMARIGGIFSPVIAM 491 (528)
T ss_pred HHHHHHHHHHHHHHHHHhcCc--chhHHHHHHHHHHHhchheEEEEecCcccchhhhhcchhhhhhHHhhhhhhhhHHHH
Confidence 999999999998887766554 245666777788889999999999999999999999999999999999999999995
Q ss_pred hhccchhHHHHHHHHHHHHHhHhhhccc-cCCCCCC
Q 039541 470 AGRQNEFLSFGVFGLVVFCFGFFVVFLP-ETIGVTL 504 (521)
Q Consensus 470 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 504 (521)
....+...+..+.+.+++++.+...++| |+|+|..
T Consensus 492 ~~e~s~sl~i~vy~~~~ilagIavcffPiEtkGR~l 527 (528)
T KOG0253|consen 492 RAELSTSLPIFVYGALFILAGIAVCFFPIETKGRSL 527 (528)
T ss_pred HhccceeehHHHHHHHHHHHHHHheeeeeccCCCCC
Confidence 4445567788888999999888887776 8888764
No 4
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=100.00 E-value=3.6e-40 Score=333.31 Aligned_cols=419 Identities=18% Similarity=0.227 Sum_probs=297.4
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHHhhhhccccCCcccccCCcccccCCccccccccCcceecCCCCcceeeec-----ce
Q 039541 36 NLGLPQFIQVILISLLLIFESQQTFISVYTDEEPTWHCINNTTTCSSSSDICTLSKSAWAWDRPSDTTIISDW-----SL 110 (521)
Q Consensus 36 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~p~~~c~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~i~~~~-----~~ 110 (521)
++++++++++.+++++.+.+++|...++.. .|.+..++ +.
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~g~d~~~~~~~-----------------------------------~~~~~~~~~~~~~~~ 53 (502)
T TIGR00887 9 PFGWQHFRAIVIAGVGFFTDSYDLFCISLV-----------------------------------TKMLGYVYYHGKGPL 53 (502)
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------------------------------HHHHHHHhccCcccc
Confidence 678999999999999999999999998888 66655532 22
Q ss_pred eeCCccccchhhHHHHHHHHHHhhhhhhhccccCCCCchHHHHHHHHHHHHHHHHHhcccc------HHHHHHHHHHhhc
Q 039541 111 ECAGSSILSGLPSSCFFIGCLLGGLALSTLGDSSSLGRKKLLFLSCFAMSITALATIFANN------IWIYSTIRFVAGF 184 (521)
Q Consensus 111 ~~~~~~~~~~~~~s~~~lg~~i~~~~~g~l~dr~~~Grr~~l~~~~~~~~~~~~~~~~~~~------~~~l~~~r~l~G~ 184 (521)
+. ...+++.+.+.++..++++++|+++|| +|||+++.+++++..++.++++++++ ++.++++|+++|+
T Consensus 54 ~~----~~~~~~~~~~~ig~~ig~~~~g~l~d~--~Grr~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~r~l~G~ 127 (502)
T TIGR00887 54 PS----SVSAAVNGSASIGTLAGQLFFGWLADK--LGRKRVYGMELIIMIIATVASGLSPGSSPKSVMATLCFWRFWLGV 127 (502)
T ss_pred hH----HHHHHHHHHHHHHHHHHHHHHHHHHHh--hccHHHHHHHHHHHHHHHHHHHHccCcccchHHHHHHHHHHHHHH
Confidence 23 344899999999999999999999999 99999999999999999999998876 7899999999999
Q ss_pred cchhhHhhhhhheeeeecCcchhHHHHHHHHHHHHHHHHHHHHHHhh-c-----------------------CCchhHHH
Q 039541 185 FRAPIMTSVIVLLSEMVSKRWRGQVVIIGFTFFSFGLVSLPAVAYLS-R-----------------------GSSWKMLY 240 (521)
Q Consensus 185 ~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~i~~~i~~~~-~-----------------------~~~wr~~f 240 (521)
+.|...+....++.|++|+++|++++++.+....+|.++++.++..+ . .++||++|
T Consensus 128 ~~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WR~~~ 207 (502)
T TIGR00887 128 GIGGDYPLSAIITSEFATKKWRGAMMAAVFAMQGFGILAGAIVALIVLAGFKHSLEAAADEASCTGSCVPAVDYMWRILI 207 (502)
T ss_pred HHhhhhHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccccccccccchhcccHHHHH
Confidence 99999999999999999999999999999999999999988874321 1 24799999
Q ss_pred HHHHHHHHHHHhhhceeeecchhHHHhcCCHH-HHHHHHHHHhhhcCCCCCCCccccccCCCCCccccCCCcccccccHH
Q 039541 241 VWTSIPSIVCCIIIYPFISESPRWLFIHGHEA-EAMAVLKRLASRSNYQSDYGLESCCLSNMPPKAKNVIPKLDLYSSLK 319 (521)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~esp~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (521)
.+.++++++.. +..+++||||+|+..+++.+ ++++.+++..+ .+.. + + ..+.++.+. +++ ....+++
T Consensus 208 ~~~~ip~~i~~-~~~~~lpESpr~l~~~~~~~~~a~~~~~~~~~-~~~~-~-~--~~~~~~~~~---~~~---~~~~~~~ 275 (502)
T TIGR00887 208 GFGAVPALLAL-YFRLTIPETPRYTADVAKDVEQAASDMSAVLQ-VKIE-A-E--PDEVEKAST---AVE---VPKASWS 275 (502)
T ss_pred HHHHHHHHHHH-HHHHhCCCCHHHHHHhCcchHHHHHHHHHHhc-cccc-c-C--cccccchhc---ccc---chhhhHH
Confidence 98888887776 66788999999998877764 45555555522 1111 0 0 001111000 000 0112567
Q ss_pred HHhccH---HHHHHHHHHHHHHHHHHHHHHh----HHhhccCCCccHH---------------HHHHHHHHHhHhHHHHH
Q 039541 320 DLFNRK---WALRRLLTIMALAFGIGVVYFG----LLLGVGNLSFNIY---------------LSLAFNGLLDIPAYLLT 377 (521)
Q Consensus 320 ~l~~~~---~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~ 377 (521)
++++++ +.++..+.....++...+.+|. .|.++++.|.+.. ....+..++.+++.++.
T Consensus 276 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~p~i~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~ 355 (502)
T TIGR00887 276 DFFTHFFKWRHGKHLLGTAGSWFLLDIAFYGVNLNQKVILSAIGYSPPAATNNAYEELYKTAVGNLIIALAGTVPGYWVT 355 (502)
T ss_pred HHHHHHhhhHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 777642 2223333333444444444444 2444444443211 01233345667788999
Q ss_pred HHHHhhcCCchHHHHHHHHHHHHHHHHHhcCCc-hHHHHHHHHHHHH-HHHHHHHHHHHHhhccccCchhhhhhhHHHHH
Q 039541 378 FILIERWSRKSSILTFCILSGTCSAICVAIGDE-QEVLQIGLELASF-FSACVAFNVLLVFGTELFTTCVRNSTTSLVRQ 455 (521)
Q Consensus 378 g~l~dr~g~~~~~~~~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 455 (521)
++++||+|||+++.++..++++++.++...... .........++.. +...+..+..+.+..|.+|++.|+++.|+.+.
T Consensus 356 ~~l~dr~gRR~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~p~~~R~~~~g~~~~ 435 (502)
T TIGR00887 356 VFLVDIIGRKPIQLMGFFILTVLFFVLGFAYNHLSTHGFLAIYVLAQFFANFGPNATTFIVPGEVFPTRYRSTAHGISAA 435 (502)
T ss_pred HHHhhhhcchhHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCchhhhhhhccCchhHHHHHHHHHHH
Confidence 999999999999888887777776555543211 1011111111211 22223345778888999999999999999999
Q ss_pred hhhhhhhHHHHHHHhhcc------------chhHHHHHHHHHHHHHhHhhhccccCCCCCCCcc
Q 039541 456 AVNLGAAFSPVLISAGRQ------------NEFLSFGVFGLVVFCFGFFVVFLPETIGVTLCDT 507 (521)
Q Consensus 456 ~~~~g~~~~p~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 507 (521)
++.++++++|.+.+.... +....+.+++++.+++.+.++++||+++++++|.
T Consensus 436 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i~~~~lpEt~~~~leei 499 (502)
T TIGR00887 436 SGKAGAIIGQFGFLYLAQHGDPTKGYPTGIWMGHVLEIFALFMFLGILFTLLIPETKGKSLEEL 499 (502)
T ss_pred HhhhHHHHHHHHhhhhhccccccccccccccchHHHHHHHHHHHHHHHHheEeccCCCCCHHhh
Confidence 999999999999875321 2345677777777777666677899999876543
No 5
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1e-39 Score=313.25 Aligned_cols=399 Identities=21% Similarity=0.261 Sum_probs=302.1
Q ss_pred eeecc--eeeCCccccchhhHHHHHHHHHHhhhhhhhccccCCCCchHHHHHHHHHHHHHHHHHhcc---ccHHHHHHHH
Q 039541 105 ISDWS--LECAGSSILSGLPSSCFFIGCLLGGLALSTLGDSSSLGRKKLLFLSCFAMSITALATIFA---NNIWIYSTIR 179 (521)
Q Consensus 105 ~~~~~--~~~~~~~~~~~~~~s~~~lg~~i~~~~~g~l~dr~~~Grr~~l~~~~~~~~~~~~~~~~~---~~~~~l~~~r 179 (521)
.+.+| .++++.+.+.+.+.+++.+|.++|+++.|+++|| +|||..++++.++..++.+++.++ +++.+++++|
T Consensus 46 ~~r~g~~~s~~~~~~lwS~~vs~f~iG~~~Gs~~~~~la~~--~GRK~~l~~~~~l~~~~~~~~~~s~~~~~~e~li~GR 123 (485)
T KOG0569|consen 46 IERYGLPLSDSTLDLLWSLIVSIFFIGGMIGSFSSGLLADR--FGRKNALLLSNLLAVLAALLMGLSKSAPSFEMLILGR 123 (485)
T ss_pred HHhcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--hcchHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHH
Confidence 34455 3333335677999999999999999999999999 999999999999988888887765 7899999999
Q ss_pred HHhhccchhhHhhhhhheeeeecCcchhHHHHHHHHHHHHHHHHHHHHH---HhhcCCchhHHHHHHHHHHHHHHhhhce
Q 039541 180 FVAGFFRAPIMTSVIVLLSEMVSKRWRGQVVIIGFTFFSFGLVSLPAVA---YLSRGSSWKMLYVWTSIPSIVCCIIIYP 256 (521)
Q Consensus 180 ~l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~i~~~i~---~~~~~~~wr~~f~~~~~~~~~~~~~~~~ 256 (521)
++.|+..|......+.|+.|..|++.||....+.+.+..+|.+++..++ .+.+...|++.+.+..+++++.+ +...
T Consensus 124 ~i~Gl~~gl~~~~~pmyl~E~sP~~~RG~~g~~~~~~~~~g~ll~~~~~l~~ilGt~~~W~~l~~~~~i~~~~~l-~~l~ 202 (485)
T KOG0569|consen 124 LIVGLACGLSTGLVPMYLTEISPKNLRGALGTLLQIGVVIGILLGQVLGLPSLLGTEDLWPYLLAFPLIPALLQL-ALLP 202 (485)
T ss_pred HHHHHHhHHHHHHHHHHHhhcChhhhccHHHHHHHHHHHHHHHHHHHHccHHhcCCCcchHHHHHHHHHHHHHHH-HHHh
Confidence 9999999999999999999999999999999999999999999998774 34456679999999999999998 8888
Q ss_pred eeecchhHHHh-cCCHHHHHHHHHHHhhhcCCCCCCCccccccCCCCCccccCCCcccccccHHHHhccHHHHHHHHHHH
Q 039541 257 FISESPRWLFI-HGHEAEAMAVLKRLASRSNYQSDYGLESCCLSNMPPKAKNVIPKLDLYSSLKDLFNRKWALRRLLTIM 335 (521)
Q Consensus 257 ~~~esp~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 335 (521)
++||||+|+.. +++.++|+++++++.. .++.+. +.++...+.++++.+.+...+++++++++.+++...+.+
T Consensus 203 ~~PESPk~Ll~~k~~~~~A~~sl~~y~G-~~~~~~------~~e~~~~e~~~~~~~~~~~~sl~~~~~~~~lR~~~~i~~ 275 (485)
T KOG0569|consen 203 FLPESPKYLLIKKGDEEEARKALKFYRG-KEDVEA------EIEEMLREIEEEELEKKKQISLRQLLKNPTLRRPLLIGI 275 (485)
T ss_pred cCCCCcchHHHHcCCHHHHHHHHHHHhC-CCcchh------HHHHHHHHHHHhccccccCCcHHHHhcCcchhHHHHHHH
Confidence 99999999998 8999999999999833 222111 111111111111111123458999999999998877776
Q ss_pred HHHHHH-----HHHHHhHHhhccCCCccH---HHHHHHHHHHhHhHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHhc
Q 039541 336 ALAFGI-----GVVYFGLLLGVGNLSFNI---YLSLAFNGLLDIPAYLLTFILIERWSRKSSILTFCILSGTCSAICVAI 407 (521)
Q Consensus 336 ~~~~~~-----~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~i~~~~~~~~ 407 (521)
...++. +...++...++.+.|.+. .......++..++.++++.+++||+|||++++.+..++.+..+++...
T Consensus 276 ~v~~~qq~sGi~ai~~Yst~i~~~aG~~~~~a~~an~~~g~v~~~~t~~~~~lid~~gRRpLll~~~~~~~~~~~~~~~~ 355 (485)
T KOG0569|consen 276 VVSFAQQFSGINAIFFYSTSIFKTAGFTPEEAQYANLGIGIVNLLSTLVSPFLIDRLGRRPLLLISLSLMAVALLLMSIA 355 (485)
T ss_pred HHHHHHHhcCcceeHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHH
Confidence 666644 334444455566656543 445566778899999999999999999999999999988887776654
Q ss_pred CCch----HH---HHHHHHHHHHHHHHHH-HHHHHHhhccccCchhhhhhhHHHHHhhhhhhhHHHHHHHhh--ccchhH
Q 039541 408 GDEQ----EV---LQIGLELASFFSACVA-FNVLLVFGTELFTTCVRNSTTSLVRQAVNLGAAFSPVLISAG--RQNEFL 477 (521)
Q Consensus 408 ~~~~----~~---~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~~--~~~~~~ 477 (521)
.... .| ..+++.+++.++++.+ .|+.+.+.+|++|++.|+.+.++....+.+..++-.+..... ..+. .
T Consensus 356 ~~l~~~~~~~~~y~~i~~~~~~~~~f~~G~gpi~~fi~aELf~~~~R~aa~s~~~~~~w~~~fiv~~~fp~l~~~~g~-~ 434 (485)
T KOG0569|consen 356 LFLSNSFGSWLSYLCIAAIFLFIISFAIGPGPIPWFIGAELFPQSARSAAQSVATAVNWLSNFIVGFAFPPLQNVIGP-Y 434 (485)
T ss_pred HHHHHHhhhHHHHHHHHHHHHHHHhhhcCCCchhHHHHHHhCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-h
Confidence 2211 11 2233344444444433 579999999999999999999999999988887666555431 1223 6
Q ss_pred HHHHHHHHHHHHh-HhhhccccCCCCCCCcchHhhhcc
Q 039541 478 SFGVFGLVVFCFG-FFVVFLPETIGVTLCDTLDQQEYF 514 (521)
Q Consensus 478 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 514 (521)
.|+.+.+.+++.. .++.++||||+|+..|+.++.+++
T Consensus 435 ~filF~i~~~~~~i~~~~~lPETkgr~~~eI~~~~~~~ 472 (485)
T KOG0569|consen 435 VFILFVIPLAIFLIYLYRYLPETKGRTPYEIIEELEKR 472 (485)
T ss_pred hhHHHHHHHHHHHHHHHHhCcccCCCCHHHHHHHHHhC
Confidence 6666666665554 457889999999988888776655
No 6
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=100.00 E-value=1.3e-37 Score=316.67 Aligned_cols=475 Identities=30% Similarity=0.500 Sum_probs=374.0
Q ss_pred HHHHHHhhcCCChhHHHHHHHHHHHHHHHHHHHhhhhccccCCcccc--------c-CCcccccCCccc-----------
Q 039541 27 DEMIEQNLANLGLPQFIQVILISLLLIFESQQTFISVYTDEEPTWHC--------I-NNTTTCSSSSDI----------- 86 (521)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~p~~~c--------~-~~~~~~~~~~~~----------- 86 (521)
++..+ ..++.+++|......................+....|+++| . ++|..+......
T Consensus 4 ~~~~~-~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~ 82 (521)
T KOG0255|consen 4 DEILS-SVGDFGRYQKLLLLLLGLPSIFSALHSFAQIFLAFVPDHHCTEWGCLNDAEDSCLVYWDPTLDPANPLNWPSWK 82 (521)
T ss_pred HHHHH-HhcCCcHHHHHHHHHHHHHHhHHHHHHHHHHhhccCCCchhhhhhcccCCcccceecccCccCcCCcccccccc
Confidence 34444 36788999999999999888888877777777778887666 2 566654322221
Q ss_pred -----cccccCcceecCCC-CcceeeecceeeCCccccchhhHHHHHHHHHHhhhhhhhccccCCCCchHHHHHHHHHHH
Q 039541 87 -----CTLSKSAWAWDRPS-DTTIISDWSLECAGSSILSGLPSSCFFIGCLLGGLALSTLGDSSSLGRKKLLFLSCFAMS 160 (521)
Q Consensus 87 -----c~~~~~~~~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~s~~~lg~~i~~~~~g~l~dr~~~Grr~~l~~~~~~~~ 160 (521)
+....+.|.++.+. ...+..++++-+++. ....+..+++++|.++|++++|+++|| +|||++++.++++..
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~c~~~-~~~~~~~s~~~~G~~vG~~i~g~lsD~--~GRk~~~~~~~~~~~ 159 (521)
T KOG0255|consen 83 KWLLVIVICLDGWVYDYGSSVYSIVSEWNLVCDSS-TLVALGQSLFFLGVLVGSLIFGPLSDR--FGRKPVLLVSLLLFI 159 (521)
T ss_pred ccccccccccceeEecCCCCcccccchhceeeCcH-hHHHHHHHHHHHHHHHHHhhheehHhh--cccHHHHHHHHHHHH
Confidence 22345677777543 444555566666665 777999999999999999999999999 999999999999999
Q ss_pred HHHHHHhccccHHHHHHHHHHhhccchhhHhhhhhheeeeecCcchhHHHHHHHHHHHHHHHHHHHH-HHhhcCCchhHH
Q 039541 161 ITALATIFANNIWIYSTIRFVAGFFRAPIMTSVIVLLSEMVSKRWRGQVVIIGFTFFSFGLVSLPAV-AYLSRGSSWKML 239 (521)
Q Consensus 161 ~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~i~~~i-~~~~~~~~wr~~ 239 (521)
++.++.++++|++.+++.|+++|++.++.......++.|++++++|+.+..+ ......|..+++.+ +++.. +||+.
T Consensus 160 i~~~~~a~a~~~~~~~~~Rfl~G~~~~~~~~~~~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~--~Wr~~ 236 (521)
T KOG0255|consen 160 IFGILTAFAPNYWMFLIFRFLSGFFGSGPLTVGFGLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYITR--DWRWL 236 (521)
T ss_pred HHHHHHHHhCcHHHHHHHHHHHHhhccchhHHhHhhheeecCcchhhHHHHH-HHHHHHHHHHHHHHHHHHHh--hHHHH
Confidence 9999999999999999999999999999999999999999999999999999 55555555555554 77777 99999
Q ss_pred HHHHHHHHHHHHhhhceeeecchhHHHhcCCHHHHHHHHHHHhhhcCCCCCCCccccccCCCCCccccCCCcccccccHH
Q 039541 240 YVWTSIPSIVCCIIIYPFISESPRWLFIHGHEAEAMAVLKRLASRSNYQSDYGLESCCLSNMPPKAKNVIPKLDLYSSLK 319 (521)
Q Consensus 240 f~~~~~~~~~~~~~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (521)
+++..++.++.+ +.+++.||+|+|+..+++.+++.+.++++++ .|+.........+... ..+.......+.+..+.
T Consensus 237 ~~~~~~~~~~~~-~~~~l~~Es~rwl~~~g~~~~a~~~l~~~a~-~n~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~ 312 (521)
T KOG0255|consen 237 FWIISIPSGLFL-LLWFLPPESPRWLLSKGRIDEAIKILKKIAK-LNGRKLSVKELLRLEL--LLRPLKLLFTEPKISFL 312 (521)
T ss_pred HHHHHHHHHHHH-HHHHccCcChHHHHHcCchHHHHHHHHHHHh-hcCCCCCcHHHHHHHH--HhhHhhhhccCCCCchh
Confidence 999999999887 4467777999999999999999999999876 5532222211111111 00011111111224688
Q ss_pred HHhccHHHHHHHHHHHHHHHHHHHHHHhHHhhccCCCccHHHHHHHHHHHhHhHHHHHHHHHhhcCCchHHHHHHHHHHH
Q 039541 320 DLFNRKWALRRLLTIMALAFGIGVVYFGLLLGVGNLSFNIYLSLAFNGLLDIPAYLLTFILIERWSRKSSILTFCILSGT 399 (521)
Q Consensus 320 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~i 399 (521)
++++.|++++.++...+.++.....+|.+.+.....|.+.+......+....++....+...|++|||.....+..+..+
T Consensus 313 ~l~~~~~l~~~~~~~~~~~~~~~~~y~gl~~~~~~lg~~~~~~~~~~~~~~~p~~~~~~~~~~~~gR~~~~~~~~~~~~~ 392 (521)
T KOG0255|consen 313 DLFRTPRLRYRTLYLLFIWFVFSLVYYGLSLNVSGLGGNIYLNFTLSGLVELPAYFRNGLLLPEFGRRPPLFLSLFLAGI 392 (521)
T ss_pred hhhcCHHHHHHHHHHHHHHHHHhHHHHhhhhhhhhcCchHHHHHHHHHHHHhhHHHHHHHHHHHhCcHHHHHHHHHHHHH
Confidence 99999988999999999999999999999999999999998888888888889999999999999999999999999999
Q ss_pred HHHHHHhcCCchH-HHHHHHHHHHHHHHHHHHHHHHHhhccccCchhhhhhhHHHHHhhhhhhhHHHHHHHhhc-cchhH
Q 039541 400 CSAICVAIGDEQE-VLQIGLELASFFSACVAFNVLLVFGTELFTTCVRNSTTSLVRQAVNLGAAFSPVLISAGR-QNEFL 477 (521)
Q Consensus 400 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~~~-~~~~~ 477 (521)
+++...+...... +...+...+..++.+..+...+.+..|++|+..|..+.+.......+|++++|.+..... .....
T Consensus 393 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~pt~~r~~~~~~~~~~~~~~~i~ap~~~~~~~~~~~~~ 472 (521)
T KOG0255|consen 393 GLLLFGWLPDDLGGWLHWILPLLGKFFIGSAFNLIFLYSAELIPTVVRNTAVGAISAAARLGSILAPLFPLLLRQMFPLL 472 (521)
T ss_pred HHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccc
Confidence 9999888876643 256677777778888888888999999999999999999999999999999999986432 23333
Q ss_pred HHHHHHHHHHHHhHh-hhccccCCCCCCCcchHhhh
Q 039541 478 SFGVFGLVVFCFGFF-VVFLPETIGVTLCDTLDQQE 512 (521)
Q Consensus 478 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 512 (521)
.+.+++....+..++ ..++||++++.+.+..++.+
T Consensus 473 ~~~~~~~~~~l~~~~~~~~lpet~~~~l~~t~~~~~ 508 (521)
T KOG0255|consen 473 GLILFGWLALLLGLLSLLLLPETKGKPLPGTLLDAE 508 (521)
T ss_pred hHHHHHHHHHHHHHHHHhcCcccCCCCCchhHHHHH
Confidence 434445555555544 48899999999887776666
No 7
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=100.00 E-value=9.4e-38 Score=285.89 Aligned_cols=398 Identities=14% Similarity=0.118 Sum_probs=308.6
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHHhhhhccccCCcccccCCcccccCCccccccccCcceecCCCCcceeeecceeeCCc
Q 039541 36 NLGLPQFIQVILISLLLIFESQQTFISVYTDEEPTWHCINNTTTCSSSSDICTLSKSAWAWDRPSDTTIISDWSLECAGS 115 (521)
Q Consensus 36 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~p~~~c~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 115 (521)
.+.++|+.+++.+++++....+.+...+++ .|.+.+|.++|.+|.
T Consensus 22 ~y~~~r~qif~~~fiGYa~fYl~RknF~~a-----------------------------------~p~l~e~~~lsk~~l 66 (448)
T COG2271 22 TYKRWRIQIFLSIFIGYAAFYLTRKNFNLA-----------------------------------MPALIEDGGLSKTQL 66 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhHhhc-----------------------------------cHHHHHhcCCCHHHH
Confidence 478899999999999999999999999999 999999999999777
Q ss_pred cccchhhHHHHHHHHHHhhhhhhhccccCCCCchHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHhhccchhhHhhhhh
Q 039541 116 SILSGLPSSCFFIGCLLGGLALSTLGDSSSLGRKKLLFLSCFAMSITALATIFANNIWIYSTIRFVAGFFRAPIMTSVIV 195 (521)
Q Consensus 116 ~~~~~~~~s~~~lg~~i~~~~~g~l~dr~~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~ 195 (521)
|++.+++++.+.++-.+.|.++|| .+.|+.+.+++++.++.+++++++++.+.+.+..+++|+.+|..+|.+..
T Consensus 67 ----G~i~s~f~i~YG~sKf~~G~~sDr--~npr~fm~~gLilsai~nil~Gfs~s~~~~~~l~~lng~fQg~Gwpp~~~ 140 (448)
T COG2271 67 ----GILGSAFSITYGVSKFVMGVLSDR--SNPRYFMAFGLILSAIVNILFGFSPSLFLFAVLWVLNGWFQGMGWPPCAR 140 (448)
T ss_pred ----HHHHHHHHHHHHHHHHHhhhhccc--CCCceeehHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCcHHHH
Confidence 999999999999999999999999 99999999999999999999999999999999999999999999999999
Q ss_pred heeeeecCcchhHHHHHHHHHHHHHHHHHHHH---HHhhcCCchhHHHHHHHHHHHHHHhhhceeeecchhHHHhcCCHH
Q 039541 196 LLSEMVSKRWRGQVVIIGFTFFSFGLVSLPAV---AYLSRGSSWKMLYVWTSIPSIVCCIIIYPFISESPRWLFIHGHEA 272 (521)
Q Consensus 196 ~i~~~~~~~~rg~~~~~~~~~~~~G~~i~~~i---~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~~~esp~~~~~~~~~~ 272 (521)
.++.|+|+++||+..++++++.++|..+.|++ +.+..+.+||..|++.++++++..+++++.++|+|+..-... .|
T Consensus 141 ~i~~Wfsr~eRG~~~siWn~shNiGGal~~~~~~la~~~~~~~w~~~f~~pgiiaiival~~~~~~rd~Pqs~GLP~-ie 219 (448)
T COG2271 141 TITHWFSRKERGTWWSIWNTSHNIGGALAPLVALLAFFAFHGGWRAAFYFPGIIAIIVALILLFLLRDRPQSEGLPP-IE 219 (448)
T ss_pred HHHHHcCccccCceEEEehhhhhcccchHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhCCCccccCCCC-HH
Confidence 99999999999999999999999998877655 566777899999999999999999888888999985321111 11
Q ss_pred HHHHHHHHHhhhcCCCCCCCccccccCCCCCccccCCCccccc-ccHHHHhccHHHHHHHHHHHHHHHHHH-HHHHhHHh
Q 039541 273 EAMAVLKRLASRSNYQSDYGLESCCLSNMPPKAKNVIPKLDLY-SSLKDLFNRKWALRRLLTIMALAFGIG-VVYFGLLL 350 (521)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 350 (521)
+- .++. .+.. .++ ++.+..+.+ .-++-+++||..|...+...+.+..=. +..+...+
T Consensus 220 ~~----------~~d~---------~e~~-~~~-~~~~~ls~~~i~~~YVL~Nk~iW~la~a~vfvYivR~gi~dW~p~Y 278 (448)
T COG2271 220 EY----------RGDP---------LEIY-EEE-KENEGLTAWQIFVKYVLKNKLIWLLALANVFVYVVRYGINDWGPLY 278 (448)
T ss_pred Hh----------hcCc---------hhhh-hhh-ccCCCccHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHhhhHHHH
Confidence 10 0000 0000 000 000001111 134567889988777666666666543 33344444
Q ss_pred hccCCCccH---HHHHHHHHHHhHhHHHHHHHHHhhc--CCchHHHHHHH-HHHHHHHHHHhcCCchHHHHHHHHHHHHH
Q 039541 351 GVGNLSFNI---YLSLAFNGLLDIPAYLLTFILIERW--SRKSSILTFCI-LSGTCSAICVAIGDEQEVLQIGLELASFF 424 (521)
Q Consensus 351 ~~~~~~~~~---~~~~~~~~~~~~~~~~~~g~l~dr~--g~~~~~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 424 (521)
..+..+.+. .....+.-.++++|+++.||++||+ |||..+.+.+. ...++.+.+...+..+.+...+++++.|+
T Consensus 279 L~e~k~~s~~~a~~a~~lfE~agl~G~Ll~GwlSDklfkgrR~p~~~i~~~~i~~~~~~~w~~~~~~~~l~~~~l~~iGf 358 (448)
T COG2271 279 LSEVKGFSLVKANWAISLFEVAGLPGTLLAGWLSDKLFKGRRGPMALIFMLLITASLVLYWLAPNGSYLLDAILLFIIGF 358 (448)
T ss_pred HHHhcCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHH
Confidence 445555553 4445666788999999999999996 66765555444 44444444444444444667778888888
Q ss_pred HHHHHHHHHHHhhccccCchhhhhhhHHHHHhhhh-hhhHHHHHHHhh--ccchhHHHHHHHHHHHHHhHhhhcc
Q 039541 425 SACVAFNVLLVFGTELFTTCVRNSTTSLVRQAVNL-GAAFSPVLISAG--RQNEFLSFGVFGLVVFCFGFFVVFL 496 (521)
Q Consensus 425 ~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~-g~~~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 496 (521)
...+..-+.-..+.|..|++..|++.|+...++++ |+..+....++. ..++...|.++.+.++++.++....
T Consensus 359 ~IyGPqmLiGl~a~e~~pK~AaGtA~Gf~Glf~Yl~Ga~~a~~~~g~i~d~~gW~g~Fi~~~~~a~l~~lll~~~ 433 (448)
T COG2271 359 LIYGPQMLIGLAAAEFVPKKAAGTATGFVGLFAYLIGAALAGLPLGYIADTWGWDGGFIVLSIAALLAILLLLPV 433 (448)
T ss_pred HHhhHHHHHHHHHhccccHhhccchhchhhhHHHHhhHHhcCCcceeeEecCCCcchHHHHHHHHHHHHHHHHHH
Confidence 88888888888899999999999999999999999 888888877763 3467777887777777766654433
No 8
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=100.00 E-value=1.2e-36 Score=307.53 Aligned_cols=417 Identities=17% Similarity=0.231 Sum_probs=288.4
Q ss_pred CChhHHHHHHHHHHHHHHHHHHHhhhhccccCCcccccCCcccccCCccccccccCcceecCCCCcceeeec--------
Q 039541 37 LGLPQFIQVILISLLLIFESQQTFISVYTDEEPTWHCINNTTTCSSSSDICTLSKSAWAWDRPSDTTIISDW-------- 108 (521)
Q Consensus 37 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~p~~~c~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~i~~~~-------- 108 (521)
..+++++.++++.++.+.++++...++.. .|.+++++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------------------~~~~~~~~~~~~~~~~ 50 (479)
T PRK10077 6 NSSYIFSITLVATLGGLLFGYDTAVISGT-----------------------------------VESLNTVFVAPQNLSE 50 (479)
T ss_pred cchHHHHHHHHHHHHHHhcCcccceehHh-----------------------------------HHHHHHHhcccccccc
Confidence 45677888888889999999999988887 56666655
Q ss_pred ceeeCCccccchhhHHHHHHHHHHhhhhhhhccccCCCCchHHHHHHHHHHHHHHHHHhcc------------ccHHHHH
Q 039541 109 SLECAGSSILSGLPSSCFFIGCLLGGLALSTLGDSSSLGRKKLLFLSCFAMSITALATIFA------------NNIWIYS 176 (521)
Q Consensus 109 ~~~~~~~~~~~~~~~s~~~lg~~i~~~~~g~l~dr~~~Grr~~l~~~~~~~~~~~~~~~~~------------~~~~~l~ 176 (521)
+++.++. +++.+++.++..++++++|+++|| +|||++++++.++++++.++++++ ++++.++
T Consensus 51 ~~~~~~~----~~~~s~~~ig~~~~~~~~G~l~dr--~Grr~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~ 124 (479)
T PRK10077 51 SAANSLL----GFCVASALIGCIIGGALGGYCSNR--FGRRDSLKIAAVLFFISALGSAWPEFGFTSIGPDNTGYVPEFV 124 (479)
T ss_pred cCChhHH----HHHHHHHHHHHHHHHHHHHHHHHH--hccHHHHHHHHHHHHHHHHHHHhhccccccccccchhHHHHHH
Confidence 7777555 999999999999999999999999 999999999999999998888763 2356788
Q ss_pred HHHHHhhccchhhHhhhhhheeeeecCcchhHHHHHHHHHHHHHHHHHHHHHHhh---------cCCchhHHHHHHHHHH
Q 039541 177 TIRFVAGFFRAPIMTSVIVLLSEMVSKRWRGQVVIIGFTFFSFGLVSLPAVAYLS---------RGSSWKMLYVWTSIPS 247 (521)
Q Consensus 177 ~~r~l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~i~~~i~~~~---------~~~~wr~~f~~~~~~~ 247 (521)
++|+++|++.|...+...++++|++|+++|++++++.+.+..+|.++++.++... ...+||++|++.+++.
T Consensus 125 ~~R~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~ 204 (479)
T PRK10077 125 IYRIIGGIGVGLASMLSPMYIAEIAPAHIRGKLVSFNQFAIIFGQLVVYFVNYFIARSGDASWLNTDGWRYMFASEAIPA 204 (479)
T ss_pred HHHHHHhhhHhHHhhHHHHHHHhhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhccCcccccccCChHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999988775422 3579999999988888
Q ss_pred HHHHhhhceeeecchhHHHhcCCHHHHHHHHHHHhhhcCCCCCCCccccccCCCCCccccCCCcccccccHHHHhccHHH
Q 039541 248 IVCCIIIYPFISESPRWLFIHGHEAEAMAVLKRLASRSNYQSDYGLESCCLSNMPPKAKNVIPKLDLYSSLKDLFNRKWA 327 (521)
Q Consensus 248 ~~~~~~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 327 (521)
++.. +..+++||+|+++..+++.+++++..++..+ .+.. ....++.....++.. ...+..+...
T Consensus 205 ~~~~-~~~~~l~~s~~~l~~~~~~~~~~~~~~~~~~-~~~~------~~~~~~~~~~~~~~~------~~~~~~~~~~-- 268 (479)
T PRK10077 205 LLFL-MLLYFVPETPRYLMSRGKQEQAEGILRKIMG-NTLA------TQALQEIKHSLDHGR------KTGGKLLMFG-- 268 (479)
T ss_pred HHHH-HHHHcCCCCcHHHHHcCCHHHHHHHHHHHcC-ChhH------HHHHHHHHHHHHHhh------hhhhhhcchh--
Confidence 7776 5567789999998777777776655555421 1000 000000000000000 0000111100
Q ss_pred HHHHHHHHHH-HH----HHHHHHHhHHhhccCCCcc---HHHHHHHHHHHhHhHHHHHHHHHhhcCCchHHHHHHHHHHH
Q 039541 328 LRRLLTIMAL-AF----GIGVVYFGLLLGVGNLSFN---IYLSLAFNGLLDIPAYLLTFILIERWSRKSSILTFCILSGT 399 (521)
Q Consensus 328 ~~~~~~~~~~-~~----~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~i 399 (521)
.......... .+ ......|..|.+.++.+.+ ........++..+++.++.++++||+|||+++..+..++++
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~i~~~~~~~v 348 (479)
T PRK10077 269 VGVIVIGVMLSVFQQFVGINVVLYYAPEIFKTLGASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAI 348 (479)
T ss_pred HHHHHHHHHHHHHHHHhChhHHHHHHHHHHHHcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhHHHHHH
Confidence 0011111111 11 1122334456655555543 23344456677888999999999999999999999988888
Q ss_pred HHHHHHhcCC--chHHHHHHHHHHHHHHHHHH-HHHHHHhhccccCchhhhhhhHHHHHhhhhhhhHHHHHHHhh-----
Q 039541 400 CSAICVAIGD--EQEVLQIGLELASFFSACVA-FNVLLVFGTELFTTCVRNSTTSLVRQAVNLGAAFSPVLISAG----- 471 (521)
Q Consensus 400 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~~----- 471 (521)
+.+.+..... ..........++.+++.+.. .+..+.++.|.+|++.|+++.|+.+....+|.++++.+.+..
T Consensus 349 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~~~p~~~~~~~ 428 (479)
T PRK10077 349 GMFSLGTAFYTQAPGIVALLSMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWIANYFVSWTFPMMDKNSW 428 (479)
T ss_pred HHHHHHHHHhcCcccHHHHHHHHHHHHHHhccccchhHHHhHhhCChhHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccc
Confidence 8776654321 11122223333444443332 367789999999999999999999999999998886665421
Q ss_pred ---ccchhHHHHHHHHHHHHHhHh-hhccccCCCCCCCcchHh
Q 039541 472 ---RQNEFLSFGVFGLVVFCFGFF-VVFLPETIGVTLCDTLDQ 510 (521)
Q Consensus 472 ---~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 510 (521)
..+....|.+.++..+++.++ +++.||+++++.+|..++
T Consensus 429 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~ 471 (479)
T PRK10077 429 LVAHFHNGFSYWIYGCMGVLAALFMWKFVPETKGKTLEEMEAL 471 (479)
T ss_pred hhhhccCccHHHHHHHHHHHHHHHHHhccccCCCCCHHHHHHH
Confidence 233455666666665555544 456688888776554433
No 9
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=100.00 E-value=4e-36 Score=302.70 Aligned_cols=392 Identities=17% Similarity=0.088 Sum_probs=267.8
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhccccCCcccccCCcccccCCccccccccCcceecCCCCcceeeecceeeCCccccch-
Q 039541 42 FIQVILISLLLIFESQQTFISVYTDEEPTWHCINNTTTCSSSSDICTLSKSAWAWDRPSDTTIISDWSLECAGSSILSG- 120 (521)
Q Consensus 42 ~~~~~~~~l~~~~~~~~~~~~~~~~~~p~~~c~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~- 120 (521)
+..+...+++.+++++|...+++. .|.+.++++.+.++.....+
T Consensus 15 ~~~~~~~~~g~~~~~~d~~~~~~~-----------------------------------~~~i~~~~~~~~~~~~~~~~~ 59 (490)
T PRK10642 15 RKAITAASLGNAMEWFDFGVYGFV-----------------------------------AYALGKVFFPGADPSVQMIAA 59 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-----------------------------------HHHHHHhhCCCCCcHHHHHHH
Confidence 456677789999999999999999 89999998765543201111
Q ss_pred h-hHHHHHHHHHHhhhhhhhccccCCCCchHHHHHHHHHHHHHHHHHhccccHHH--------HHHHHHHhhccchhhHh
Q 039541 121 L-PSSCFFIGCLLGGLALSTLGDSSSLGRKKLLFLSCFAMSITALATIFANNIWI--------YSTIRFVAGFFRAPIMT 191 (521)
Q Consensus 121 ~-~~s~~~lg~~i~~~~~g~l~dr~~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~--------l~~~r~l~G~~~g~~~~ 191 (521)
+ +.++.+++..++++++|+++|| +|||+++.+++++++++++++++++|++. +++.|+++|++.|+.++
T Consensus 60 ~~~~~~~~l~~~ig~~~~G~l~Dr--~Grr~~l~~~~~l~~i~~~~~a~~~~~~~~g~~a~~~l~~~R~l~G~g~g~~~~ 137 (490)
T PRK10642 60 LATFSVPFLIRPLGGLFFGMLGDK--YGRQKILAITIVIMSISTFCIGLIPSYATIGIWAPILLLLCKMAQGFSVGGEYT 137 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHh--cccHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhHhHhhHH
Confidence 1 2578889999999999999999 99999999999999999999999999874 89999999999999999
Q ss_pred hhhhheeeeecCcchhHHHHHHHHHHHHHHHHHHHHHHh---------hcCCchhHHHHHHHHHHHHHHhhhceeeecch
Q 039541 192 SVIVLLSEMVSKRWRGQVVIIGFTFFSFGLVSLPAVAYL---------SRGSSWKMLYVWTSIPSIVCCIIIYPFISESP 262 (521)
Q Consensus 192 ~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~i~~~i~~~---------~~~~~wr~~f~~~~~~~~~~~~~~~~~~~esp 262 (521)
...+++.|++|+++||++.++...+..+|.++++.+..+ ...+|||++|++.+++.++.. +....+||+|
T Consensus 138 ~~~~~~~e~~p~~~Rg~~~~~~~~~~~~G~~lg~~~~~~~~~~~~~~~~~~~gWR~~f~i~~~~~l~~~-~~~~~~~esp 216 (490)
T PRK10642 138 GASIFVAEYSPDRKRGFMGSWLDFGSIAGFVLGAGVVVLISTIVGEANFLDWGWRIPFFIALPLGIIGL-YLRHALEETP 216 (490)
T ss_pred HHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhcCccHHHHHHHHHHHHHHHH-HHHHcCCCCh
Confidence 999999999999999999999999888888888765322 136799999999877666554 5567889999
Q ss_pred hHHHhcCCHHHHHHHHHHHhhhcCCCCCCCccccccCCCCCccccCCCcccccccHHHHhccHHHHHHHHHHHHHH----
Q 039541 263 RWLFIHGHEAEAMAVLKRLASRSNYQSDYGLESCCLSNMPPKAKNVIPKLDLYSSLKDLFNRKWALRRLLTIMALA---- 338 (521)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~---- 338 (521)
++...+++.++. +.+ .. ++ ..+.++++++++. ++.........
T Consensus 217 ~~~~~~~~~~~~-----------~~~-----------~~----~~-----~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 263 (490)
T PRK10642 217 AFQQHVDKLEQG-----------DRE-----------GL----QD-----GPKVSFKEIATKH--WRSLLTCIGLVIATN 263 (490)
T ss_pred hHHHHHHhhhhh-----------ccc-----------cc----cc-----cccCCHHHHHHHh--HHHHHHHHHHHHHHH
Confidence 864322111100 000 00 00 0012456666532 12222221111
Q ss_pred HHHHHHHHhHHhhc-cCCCccHHH---HHHHHHHHhHhHHHHHHHHHhhcCCchHHHHHHHHHHHHHHH-HHhcCCchHH
Q 039541 339 FGIGVVYFGLLLGV-GNLSFNIYL---SLAFNGLLDIPAYLLTFILIERWSRKSSILTFCILSGTCSAI-CVAIGDEQEV 413 (521)
Q Consensus 339 ~~~~~~~~~~~~~~-~~~~~~~~~---~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~i~~~~-~~~~~~~~~~ 413 (521)
+.........|.++ +..+.+... ......++.+++.++.|+++||+|||+.+..+.++..+..+. +.........
T Consensus 264 ~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (490)
T PRK10642 264 VTYYMLLTYMPSYLSHNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRFGRRPFVILGSVALFVLAIPAFILINSNVIG 343 (490)
T ss_pred HHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhCCCHH
Confidence 22222223344444 344544322 223345667788889999999999999887776544333222 2222222123
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccccCchhhhhhhHHHHHhhhhhhhHHHHHHHhhc---cchhHHHHHHHHHHHHHh
Q 039541 414 LQIGLELASFFSACVAFNVLLVFGTELFTTCVRNSTTSLVRQAVNLGAAFSPVLISAGR---QNEFLSFGVFGLVVFCFG 490 (521)
Q Consensus 414 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~~~---~~~~~~~~~~~~~~~~~~ 490 (521)
...+..++.+++.+...+....+..|.+|++.|+++.|+.+....+++.++|++.++.. .+...++.+..+.++++.
T Consensus 344 ~~~~~~~~~g~~~~~~~g~~~~~~~~~~p~~~Rg~~~g~~~~~~~~~g~~~p~i~g~l~~~~~~~~~~~~~~~~~~~i~~ 423 (490)
T PRK10642 344 LIFAGLLMLAVILNCFTGVMASTLPAMFPTHIRYSALAAAFNISVLVAGLTPTLAAWLVESTQNLMMPAYYLMVVAVIGL 423 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHH
Confidence 34445555666666666777788889999999999999877777777888998887621 223444444555555555
Q ss_pred HhhhccccCCCCCC
Q 039541 491 FFVVFLPETIGVTL 504 (521)
Q Consensus 491 ~~~~~~~~~~~~~~ 504 (521)
+..+++||++++..
T Consensus 424 ~~~~~~pes~~~~~ 437 (490)
T PRK10642 424 ITGVTMKETANRPL 437 (490)
T ss_pred HHHHHhccccCCCC
Confidence 55666788766543
No 10
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=100.00 E-value=7.5e-36 Score=278.03 Aligned_cols=372 Identities=17% Similarity=0.183 Sum_probs=304.9
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHhhhhccccCCcccccCCcccccCCccccccccCcceecCCCCcceeeecceeeCCccc
Q 039541 38 GLPQFIQVILISLLLIFESQQTFISVYTDEEPTWHCINNTTTCSSSSDICTLSKSAWAWDRPSDTTIISDWSLECAGSSI 117 (521)
Q Consensus 38 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~p~~~c~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 117 (521)
.+..|..++.+.++.|..+...+.+..+ +|++.+|+|++..+.
T Consensus 8 ~~~~~~~l~aLa~~~F~igttEfv~~gL-----------------------------------Lp~iA~dl~vs~~~a-- 50 (394)
T COG2814 8 RKPMWLALLALALAAFAIGTTEFVPVGL-----------------------------------LPPIAADLGVSEGAA-- 50 (394)
T ss_pred cccchHHHHHHHHHHHHHHhHHHHHHhc-----------------------------------hHHHHHHcCCCHHHH--
Confidence 3455777788888889889999988888 999999999999777
Q ss_pred cchhhHHHHHHHHHHhhhhhhhccccCCCCchHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHhhccchhhHhhhhhhe
Q 039541 118 LSGLPSSCFFIGCLLGGLALSTLGDSSSLGRKKLLFLSCFAMSITALATIFANNIWIYSTIRFVAGFFRAPIMTSVIVLL 197 (521)
Q Consensus 118 ~~~~~~s~~~lg~~i~~~~~g~l~dr~~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i 197 (521)
|++.|.|.++..+++++...+.|| +.||++++..+.++.++++++++++||+.++++|++.|+..|..++...++.
T Consensus 51 --G~lis~yAl~~ai~ap~l~~lt~r--~~Rr~lLl~~l~lFi~~n~l~alAp~f~~Ll~aR~~~g~a~G~f~~i~~~~a 126 (394)
T COG2814 51 --GQLITAYALGVALGAPLLALLTGR--LERRRLLLGLLALFIVSNLLSALAPSFAVLLLARALAGLAHGVFWSIAAALA 126 (394)
T ss_pred --HHHHHHHHHHHHHHHHHHHHHHcc--cchHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999 9999999999999999999999999999999999999999999999999999
Q ss_pred eeeecCcchhHHHHHHHHHHHHHHHHHHHH-HHhhcCCchhHHHHHHHHHHHHHHhhhceeeecchhHHHhcCCHHHHHH
Q 039541 198 SEMVSKRWRGQVVIIGFTFFSFGLVSLPAV-AYLSRGSSWKMLYVWTSIPSIVCCIIIYPFISESPRWLFIHGHEAEAMA 276 (521)
Q Consensus 198 ~~~~~~~~rg~~~~~~~~~~~~G~~i~~~i-~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~~~esp~~~~~~~~~~~~~~ 276 (521)
.+..|+++|++++++...+.+++.++|..+ .++.+.+|||+.|+..+.++++.++..+..+| |+. .
T Consensus 127 ~~lvpp~~~~~Aiaiv~~G~tlA~v~GvPLGt~ig~~~GWR~~F~~ia~l~ll~~~~~~~~lP--~~~-----~------ 193 (394)
T COG2814 127 ARLVPPGKRGRALALVFTGLTLATVLGVPLGTFLGQLFGWRATFLAIAVLALLALLLLWKLLP--PSE-----I------ 193 (394)
T ss_pred HHHcCccchhhHHHHHHHHHHHHHHHhccHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhCC--Ccc-----C------
Confidence 999999999999999999999999999888 56778899999999999999999988888888 210 0
Q ss_pred HHHHHhhhcCCCCCCCccccccCCCCCccccCCCcccccccHHHHhccHHHHHHHHHHHHHHHHHHHHHHh-HHhhccCC
Q 039541 277 VLKRLASRSNYQSDYGLESCCLSNMPPKAKNVIPKLDLYSSLKDLFNRKWALRRLLTIMALAFGIGVVYFG-LLLGVGNL 355 (521)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 355 (521)
.++ ......+..+++|+|..+..++...+...+....|.+ -|+..+..
T Consensus 194 ---------~~~----------------------~~~~~~~~~~~l~~p~v~~~l~~t~l~~~g~F~~ftYi~P~L~~v~ 242 (394)
T COG2814 194 ---------SGS----------------------LPGPLRTLLRLLRRPGVLLGLLATFLFMTGHFALYTYIRPFLESVA 242 (394)
T ss_pred ---------CCC----------------------CCcchhHHHHHhcCchHHHHHHHHHHHHcchhhhHHhHHHHHHHcc
Confidence 000 0000124567899999888888877777777666644 46655556
Q ss_pred CccH---HHHHHHHHHHhHhHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHH
Q 039541 356 SFNI---YLSLAFNGLLDIPAYLLTFILIERWSRKSSILTFCILSGTCSAICVAIGDEQEVLQIGLELASFFSACVAFNV 432 (521)
Q Consensus 356 ~~~~---~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 432 (521)
+.+. ......++++.++|+.++|++.|| +.|+.+.....+.++.++.+.+..... +...+..+++++........
T Consensus 243 g~s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr-~~~~~l~~~~~l~a~~~l~l~~~~~~~-~~~~~~~~~wg~a~~~~~~~ 320 (394)
T COG2814 243 GFSVSAVSLVLLAFGIAGFIGNLLGGRLADR-GPRRALIAALLLLALALLALTFTGASP-ALALALLFLWGFAFSPALQG 320 (394)
T ss_pred CCCHhHHHHHHHHHHHHHHHHHHHHhhhccc-cchhHHHHHHHHHHHHHHHHHHhcchH-HHHHHHHHHHHHHhhhhhhH
Confidence 6554 455577889999999999999999 888888888888888887777766554 45555566677777776677
Q ss_pred HHHhhccccCchhhhhhhHHHHHhhhhhhhHHHHHHHh--hccchhHHHHHHHHHHHHHhHhhhccc
Q 039541 433 LLVFGTELFTTCVRNSTTSLVRQAVNLGAAFSPVLISA--GRQNEFLSFGVFGLVVFCFGFFVVFLP 497 (521)
Q Consensus 433 ~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 497 (521)
......+ .-++.++.+.+++....++|..+|..+.|. ...++....++.+++.+++.++.+...
T Consensus 321 ~~~~~a~-~~p~~~~~a~sl~~aa~nlgia~GA~lGG~v~~~~g~~~~~~~~a~l~~~a~~~~~~~~ 386 (394)
T COG2814 321 LQTRLAR-LAPDAADLAGSLNVAAFNLGIALGAALGGLVLDALGYAATGWVGAALLLLALLLALLSA 386 (394)
T ss_pred HHHHhcc-cCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHH
Confidence 7777777 445666999999999999999999999986 445666667777777777666654443
No 11
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=100.00 E-value=6.4e-36 Score=288.07 Aligned_cols=356 Identities=10% Similarity=-0.008 Sum_probs=257.8
Q ss_pred cceecCCCCcceeeecceeeCCccccchhhHHHHHHHHHHhhhhhhhccccCCCCchHHHHHHHHHHHHHHHHHhccccH
Q 039541 93 AWAWDRPSDTTIISDWSLECAGSSILSGLPSSCFFIGCLLGGLALSTLGDSSSLGRKKLLFLSCFAMSITALATIFANNI 172 (521)
Q Consensus 93 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~lg~~i~~~~~g~l~dr~~~Grr~~l~~~~~~~~~~~~~~~~~~~~ 172 (521)
.|....|.+|.+++|+|++.++. |++.+.+.+++.+++++.|+++|| +|||+++..+++....+.+....++|+
T Consensus 6 ~~~~~~~~lp~i~~~~~~s~~~~----g~~~s~~~~g~~i~~~~~G~l~Dr--~grr~~~~~~~~~~~~~~~~~~~~~~~ 79 (368)
T TIGR00903 6 IWVTFSPVLSLVAEDIDVSKEEL----GLLAITYPAAFLALTIPSGLLLDR--AFKRWFLFGSLATFAAAAGRLLDPFNY 79 (368)
T ss_pred HHHHHHhhHHHHHHHhCcCHHHH----HHHHHHHHHHHHHHHHHHHHHHHH--ccchHHHHHHHHHHHHHHHHHHHhccH
Confidence 34445556999999999999776 999999999999999999999999 999998776665555544433444799
Q ss_pred HHHHHHHHHhhccchhhHhhhhhheeeeecCcchhHHHHHHHHHHHHHHHHHHHH-HHhhcCCchhHHHHHHHHHHHHHH
Q 039541 173 WIYSTIRFVAGFFRAPIMTSVIVLLSEMVSKRWRGQVVIIGFTFFSFGLVSLPAV-AYLSRGSSWKMLYVWTSIPSIVCC 251 (521)
Q Consensus 173 ~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~i~~~i-~~~~~~~~wr~~f~~~~~~~~~~~ 251 (521)
+.+++.|+++|++.+. .......++|++|+++|++++++.+.+..+|.++++++ +.+.+.+|||+.|++.++++++..
T Consensus 80 ~~l~~~R~l~G~g~~~-~~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~~gWr~~f~~~~~l~~~~~ 158 (368)
T TIGR00903 80 EWLLACQLLAALGQPF-LLNAFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIYTAGGLQLLIIPIAAVAAAGI 158 (368)
T ss_pred HHHHHHHHHHHhHhHH-HHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHH
Confidence 9999999999999985 55566667999999999999999999999999999988 566678899999999888888877
Q ss_pred hhhceeeecchhHHHhcCCHHHHHHHHHHHhhhcCCCCCCCccccccCCCCCccccCCCcccccccHHHHhccHHHHHHH
Q 039541 252 IIIYPFISESPRWLFIHGHEAEAMAVLKRLASRSNYQSDYGLESCCLSNMPPKAKNVIPKLDLYSSLKDLFNRKWALRRL 331 (521)
Q Consensus 252 ~~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 331 (521)
++.++++||+|++.. +..+.+ + ...++++++++|.++...
T Consensus 159 ~~~~~~lp~~p~~~~---~~~~~~----~---------------------------------~~~~~~~ll~~~~~~~~~ 198 (368)
T TIGR00903 159 ILVLAALPALPFQAA---EGFGFK----D---------------------------------AVKEFGALAGRKDLWIIG 198 (368)
T ss_pred HHHHHHcCCCCCCCC---CCcchH----H---------------------------------HHHHHHHHHcChhHHHHH
Confidence 677788899875310 000000 0 001467889999877666
Q ss_pred HHHHHHHHHHHHHHHhHHhhccCCCccHHHHHHHHHHHhHhHHHHHHHHHhhcCCc---hHHH-HHHHHHHHHHHHHHhc
Q 039541 332 LTIMALAFGIGVVYFGLLLGVGNLSFNIYLSLAFNGLLDIPAYLLTFILIERWSRK---SSIL-TFCILSGTCSAICVAI 407 (521)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~---~~~~-~~~~~~~i~~~~~~~~ 407 (521)
+..++............|.++++.+.+.. ......+..+.+.+..+++.||..|| +... ....+.++.+..+...
T Consensus 199 ~~~~~~~~~~~~~~~wlp~~L~~~g~s~~-~~~~~~l~~~~g~~g~~~~~d~~~r~~~r~~~~~~~~~~~a~~~~~~~~~ 277 (368)
T TIGR00903 199 AILGFGVALFDNLAIWLEAALRPAGLEDI-AGDAVALAILAGLIGVAVIPDRVARAGLRSIYIRAAALLIAAFFLALAFE 277 (368)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCChH-HHHHHHHHHHHHHHHHHHhhHHhhhhhhHHHHHHHHHHHHHHHHHHHHHc
Confidence 66555555554444455666666665543 33334445555666678888887654 2222 2333334444333332
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHhhccccCchhhhhhhHHHHHhhhhhhhHHHHHHHhhccchhHHHHHHHHHHH
Q 039541 408 GDEQEVLQIGLELASFFSACVAFNVLLVFGTELFTTCVRNSTTSLVRQAVNLGAAFSPVLISAGRQNEFLSFGVFGLVVF 487 (521)
Q Consensus 408 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~~~~~~~~~~~~~~~~~~ 487 (521)
.+. ........+.+++....++..+.+.+|.+|++.|+++.|+.+..+++|++++|.+.+....+....|.++++..+
T Consensus 278 ~~~--~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~rgt~~G~~~~~g~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~ 355 (368)
T TIGR00903 278 LNR--LALFAFIGIAGLLMLPAYAIIMDWIGKFCDKELHGKAAGAIGFTSRAISVALALAAMLFISSAEAYFTFLAILIT 355 (368)
T ss_pred ccc--HHHHHHHHHHHHhhhhhHHHHHHHHHHhcchhhcCcccchhhHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 222 334445555666677777888899999999999999999999999999999999887643456677777887777
Q ss_pred HHhHhhhcccc
Q 039541 488 CFGFFVVFLPE 498 (521)
Q Consensus 488 ~~~~~~~~~~~ 498 (521)
++.+....+++
T Consensus 356 i~~~~~~~~~~ 366 (368)
T TIGR00903 356 IAFAIALLLPN 366 (368)
T ss_pred HHHHHHHhCCC
Confidence 77666544343
No 12
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=100.00 E-value=6.1e-36 Score=299.92 Aligned_cols=398 Identities=12% Similarity=0.041 Sum_probs=278.2
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHHhhhhccccCCcccccCCcccccCCccccccccCcceecCCCCcceeeecceeeCCc
Q 039541 36 NLGLPQFIQVILISLLLIFESQQTFISVYTDEEPTWHCINNTTTCSSSSDICTLSKSAWAWDRPSDTTIISDWSLECAGS 115 (521)
Q Consensus 36 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~p~~~c~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 115 (521)
.+.|..+.++.++++++++...++..++.. .|.+.+|+|++..+.
T Consensus 22 ~~~~~~~~i~~~~~~~~~~~y~~r~~~~~~-----------------------------------~~~i~~~~~~s~~~~ 66 (467)
T PRK09556 22 MWFKPFMQSYLVVFIGYLTMYLIRKNFKAA-----------------------------------QNDMISTYGLSTTEL 66 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcChhhh-----------------------------------hHHHHHhcCCCHHHH
Confidence 356677888888999999999999999999 999999999999766
Q ss_pred cccchhhHHHHHHHHHHhhhhhhhccccCCCCchHHHHHHHHHHHHHHHHHhc-----cccHHHHHHHHHHhhccchhhH
Q 039541 116 SILSGLPSSCFFIGCLLGGLALSTLGDSSSLGRKKLLFLSCFAMSITALATIF-----ANNIWIYSTIRFVAGFFRAPIM 190 (521)
Q Consensus 116 ~~~~~~~~s~~~lg~~i~~~~~g~l~dr~~~Grr~~l~~~~~~~~~~~~~~~~-----~~~~~~l~~~r~l~G~~~g~~~ 190 (521)
|++.+++.+++.+++++.|+++|| +|||+++.+++++.+++.++.++ ++|++.+++.|+++|++.+...
T Consensus 67 ----g~~~s~~~~~~~~~~~~~G~l~Dr--~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~ 140 (467)
T PRK09556 67 ----GMIGLGFSITYGVGKTLVGYYADG--KNTKQFLPFLLILSAICMLGFGASLGSGSVSLGLMIALWALSGFFQSTGG 140 (467)
T ss_pred ----HHHHHHHHHHHHHHHhhhhhHhhc--cCccchHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHhccc
Confidence 999999999999999999999999 99999998888888777766654 6899999999999999999999
Q ss_pred hhhhhheeeeecCcchhHHHHHHHHHHHHHHHHHHHHH-HhhcC---CchhHHHHHHHHHHHHHHhhhceeeecchhHHH
Q 039541 191 TSVIVLLSEMVSKRWRGQVVIIGFTFFSFGLVSLPAVA-YLSRG---SSWKMLYVWTSIPSIVCCIIIYPFISESPRWLF 266 (521)
Q Consensus 191 ~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~i~~~i~-~~~~~---~~wr~~f~~~~~~~~~~~~~~~~~~~esp~~~~ 266 (521)
+...+++.|++|+++||++++++..+.++|.++++.++ ++... .+||..|.+.+++.++..++.+++.+++|+...
T Consensus 141 ~~~~~~i~~~~~~~~rg~a~gi~~~~~~lG~~l~~~i~~~~~~~~~~~~~~~~f~~~g~~~~~~~i~~~~~~~~~p~~~~ 220 (467)
T PRK09556 141 PCSYSTITRWTPRRKRGRFLGFWNISHNLGGAGAGGVALWGANYFFDGHVIGMFIFPSIIALIIGFIGLRYGSDSPEELG 220 (467)
T ss_pred hHHHHHHHHHcCccceeeeEEeeecccchhhhHHHHHHHHHHHhhccCcchhHHHHHHHHHHHHHHHHHHhCCCChhhcC
Confidence 99999999999999999999999999999999998874 34332 269999998888887776566666677664210
Q ss_pred hcCCHHHHHHHHHHHhhhcCCCCCCCccccccCCCCCccccCCCccccccc-HHHHhccHHHHHHHHHHHHHHHHHHHHH
Q 039541 267 IHGHEAEAMAVLKRLASRSNYQSDYGLESCCLSNMPPKAKNVIPKLDLYSS-LKDLFNRKWALRRLLTIMALAFGIGVVY 345 (521)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 345 (521)
.. +.++ . . + .... . +.+.++ .++....+. .+..++++.++...+..++.........
T Consensus 221 ~~-~~~~--~----~-~-~~~~---------~---~~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 278 (467)
T PRK09556 221 WG-KAEE--I----F-G-EPIS---------E---EDKETE-STDMTKWQIFVEYVLKNPVIWLLCFANIFLYIVRIGID 278 (467)
T ss_pred CC-Chhh--c----c-c-Cccc---------h---hhhccc-cccCcHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHH
Confidence 00 0000 0 0 0 0000 0 000000 000000111 2236788887766555554444443333
Q ss_pred HhHHhhc-cCCCccHHHH---HHHHHHHhHhHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHH
Q 039541 346 FGLLLGV-GNLSFNIYLS---LAFNGLLDIPAYLLTFILIERWSRKSSILTFCILSGTCSAICVAIGDEQEVLQIGLELA 421 (521)
Q Consensus 346 ~~~~~~~-~~~~~~~~~~---~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 421 (521)
+..|.++ +..+.+.... .....++.+++.++.|+++||++||+.+.....+..++...+......+.+...+..++
T Consensus 279 ~~~p~yl~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (467)
T PRK09556 279 NWSPVYAFQELGFSKEDAINTFTLFEIGALVGSLLWGWLSDLANGRRALVACIALALIIFTLGVYQHATSEYMYLASLFA 358 (467)
T ss_pred HHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHH
Confidence 4445444 5566655333 33455678899999999999999988766554443333222222222222333344555
Q ss_pred HHHHHHHHHHHHHHhhccccCchhhhhhhHHHHHhhhh-hhhHHHHHHHhhc--------------cchhHHHHHHHHHH
Q 039541 422 SFFSACVAFNVLLVFGTELFTTCVRNSTTSLVRQAVNL-GAAFSPVLISAGR--------------QNEFLSFGVFGLVV 486 (521)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~-g~~~~p~~~~~~~--------------~~~~~~~~~~~~~~ 486 (521)
.|++.............|.+|++.||++.|+.+..+++ |.+++|.+.|... .++...|.+++++.
T Consensus 359 ~G~~~~~~~~~~~~~~~~~~p~~~~g~a~gi~~~~g~l~g~~~~~~~~G~i~~~~~~g~~~~~~~~~~~~~~f~~~~~~~ 438 (467)
T PRK09556 359 LGFLVFGPQLLIGVAAVGFVPKKAIGVANGIKGTFAYLFGDSFAKVGLGMIADPTKNGTPIFGYTLTGWAGTFAALDIAA 438 (467)
T ss_pred HHHHHhhHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHhHHHHhhhHHHHhcccccccccccccccChHHHHHHHHHHH
Confidence 55443333334446677999999999999999999987 7789999988632 35677777777777
Q ss_pred HHHhHhhhcc
Q 039541 487 FCFGFFVVFL 496 (521)
Q Consensus 487 ~~~~~~~~~~ 496 (521)
+++.+..+.+
T Consensus 439 ~~~~~~~~~~ 448 (467)
T PRK09556 439 IGCICLMAIV 448 (467)
T ss_pred HHHHHHHHHH
Confidence 7776665544
No 13
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=100.00 E-value=4e-35 Score=288.75 Aligned_cols=391 Identities=14% Similarity=0.169 Sum_probs=271.8
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHhhhhccccCCcccccCCcccccCCccccccccCcceecCCCCcceeeecceeeCCccc
Q 039541 38 GLPQFIQVILISLLLIFESQQTFISVYTDEEPTWHCINNTTTCSSSSDICTLSKSAWAWDRPSDTTIISDWSLECAGSSI 117 (521)
Q Consensus 38 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~p~~~c~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 117 (521)
+|.+|.++.++++.++++..|...+++. .|.+++|+|++.++.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~-----------------------------------~~~l~~~~~~s~~~~-- 45 (412)
T TIGR02332 3 KKLFRRLIIFLFILFIFSFLDRINIGFA-----------------------------------GLTMGKDLGLSATMF-- 45 (412)
T ss_pred eeehhHHHHHHHHHHHHHHhhhhhHHHH-----------------------------------HHhhHhhcCCCHHHH--
Confidence 3567888899999999999999999999 899999999999776
Q ss_pred cchhhHHHHHHHHHHhhhhhhhccccCCCCchHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHhhccchhhHhhhhhhe
Q 039541 118 LSGLPSSCFFIGCLLGGLALSTLGDSSSLGRKKLLFLSCFAMSITALATIFANNIWIYSTIRFVAGFFRAPIMTSVIVLL 197 (521)
Q Consensus 118 ~~~~~~s~~~lg~~i~~~~~g~l~dr~~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i 197 (521)
|++.+++.+++.+++++.|+++|| +|||+++..++++.+++++++++++|++.+++.|+++|++.+...+....++
T Consensus 46 --g~~~s~~~~~~~~~~~~~g~l~dr--~G~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~ 121 (412)
T TIGR02332 46 --GLAATLFYAAYVICGIPSNIMLAI--IGARRWIAGIMVLWGIASTATMFATGPESLYLLRILVGIAEAGFLPGILLYL 121 (412)
T ss_pred --HHHHHHHHHHHHHHHhhHHHHHHH--hChHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 999999999999999999999999 9999999999999999999999999999999999999999999999999999
Q ss_pred eeeecCcchhHHHHHHHHHHHHHHHHHHHH-HHhhc------CCchhHHHHHHHHHHHHHHhhhceeeecchhHHHhcCC
Q 039541 198 SEMVSKRWRGQVVIIGFTFFSFGLVSLPAV-AYLSR------GSSWKMLYVWTSIPSIVCCIIIYPFISESPRWLFIHGH 270 (521)
Q Consensus 198 ~~~~~~~~rg~~~~~~~~~~~~G~~i~~~i-~~~~~------~~~wr~~f~~~~~~~~~~~~~~~~~~~esp~~~~~~~~ 270 (521)
.|++|+++|++++++++.+..+|.++++.+ +++.. ..|||+.|++.+++.++..++.++++||+|+.. +.-
T Consensus 122 ~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~gwr~~f~~~~~~~l~~~~~~~~~~~~~p~~~--~~l 199 (412)
T TIGR02332 122 TFWFPAYFRARANALFMIAMPVTMALGLILSGYILALDGLMALKGWQWLFLLEGFPSVILGVMTWFWLDDSPDKA--KWL 199 (412)
T ss_pred HHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCccchhHHHHHHHHHHHHHHHHHhhccCCCcccC--CCC
Confidence 999999999999999999999999999998 45542 369999999999888877767778889998521 100
Q ss_pred HHHHHHHHHHHhhhcCCCCCCCccccccCCCCCccccCCCcccccccHHHHhccHHHHHHHHHHHHHHHHHHHHHHhHHh
Q 039541 271 EAEAMAVLKRLASRSNYQSDYGLESCCLSNMPPKAKNVIPKLDLYSSLKDLFNRKWALRRLLTIMALAFGIGVVYFGLLL 350 (521)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (521)
.+++++..++..+ .+.. +.+.. ++............+++++ ++.++...+..+.............|.
T Consensus 200 ~~~~~~~~~~~~~-~~~~-~~~~~---------~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~p~ 267 (412)
T TIGR02332 200 DEEDKKALKEMID-NDQL-TLEQP---------EGAFAHAAMPQRSMLREIF-TPAIMLYTLAYFCLTNTLSAINIWTPQ 267 (412)
T ss_pred CHHHHHHHHHHHH-hccc-ccccc---------ccccccccccHHHHHHHhc-ChHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1111111111101 0000 00000 0000000001012344444 455554444433333344444445566
Q ss_pred hccCC--CccH---HHHHHHHHHHhHhHHHHHHHHHhhcCCchH-HHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHH
Q 039541 351 GVGNL--SFNI---YLSLAFNGLLDIPAYLLTFILIERWSRKSS-ILTFCILSGTCSAICVAIGDEQEVLQIGLELASFF 424 (521)
Q Consensus 351 ~~~~~--~~~~---~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~-~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 424 (521)
++++. +.+. ........++.+++.++.|+++||+++|+. ......+..++..+... .... ........+.++
T Consensus 268 ~l~~~~~~~s~~~~~~~~~~~~l~~~~g~l~~g~l~dr~~~r~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~ 345 (412)
T TIGR02332 268 ILQSFNQGSSNIMIGLLAAIPQFCTIFGMIWWSRHSDRLKERKHHTALPYLFAAAGWLLASA-TDHN-LIQLLGIIMASM 345 (412)
T ss_pred HHHhcCCCCcHHHhHHHhhHHHHHHHHHHHHHHHHhcccCccHHHHHHHHHHHHHHHHHHHh-cCCH-HHHHHHHHHHHH
Confidence 66653 3332 223455567788899999999999997774 33344444443322222 2221 222222223333
Q ss_pred HHHHHHHHHHHhhccccCchhhhhhhHHHHHhhhhhhhHHHHHHHhhcc---chhHHHHHHHHH
Q 039541 425 SACVAFNVLLVFGTELFTTCVRNSTTSLVRQAVNLGAAFSPVLISAGRQ---NEFLSFGVFGLV 485 (521)
Q Consensus 425 ~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~~~~---~~~~~~~~~~~~ 485 (521)
+.....+..+....|.+|++.|+++.|+.+...++|++++|.+.+.... ++...+.+.+++
T Consensus 346 g~~~~~~~~~~~~~~~~~~~~~~~a~g~~~~~~~~g~~~~p~~~g~i~~~~g~~~~~~~~~~~~ 409 (412)
T TIGR02332 346 GSFSAMAIFWTTPDQSISLQARAIAIAVINATGNIGSALSPFLIGILKDATGSFNSGLWFVAAL 409 (412)
T ss_pred HhhhhhhHHHhhcccccchHHHHHHHHHHHHhhhhhhhhhhhhcccccccCCCCchhHHHHHHH
Confidence 3333344555666788999999999999999999999999999986322 355555544443
No 14
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=100.00 E-value=1.1e-34 Score=286.72 Aligned_cols=376 Identities=17% Similarity=0.165 Sum_probs=282.2
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHhhhhccccCCcccccCCcccccCCccccccccCcceecCCCCcceeeecceeeCCccc
Q 039541 38 GLPQFIQVILISLLLIFESQQTFISVYTDEEPTWHCINNTTTCSSSSDICTLSKSAWAWDRPSDTTIISDWSLECAGSSI 117 (521)
Q Consensus 38 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~p~~~c~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 117 (521)
++++|.++.++++..++++++....+.. .|.+.+++|.++++.
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------------------~~~~~~~~~~s~~~~-- 52 (406)
T PRK11551 10 SSRLALTIGLCFLVALLEGLDLQSAGVA-----------------------------------APRMAQEFGLDVAQM-- 52 (406)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHH-----------------------------------HHHHHHHhCCCHHHH--
Confidence 4578889999999999999999999999 899999999999766
Q ss_pred cchhhHHHHHHHHHHhhhhhhhccccCCCCchHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHhhccchhhHhhhhhhe
Q 039541 118 LSGLPSSCFFIGCLLGGLALSTLGDSSSLGRKKLLFLSCFAMSITALATIFANNIWIYSTIRFVAGFFRAPIMTSVIVLL 197 (521)
Q Consensus 118 ~~~~~~s~~~lg~~i~~~~~g~l~dr~~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i 197 (521)
+++.+.+.++..+++++.|+++|| +|||+++..+.++.+++.++++++++++.+++.|++.|++.+...+...+++
T Consensus 53 --g~~~~~~~~~~~~~~~~~g~l~dr--~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~ 128 (406)
T PRK11551 53 --GWAFSAGILGLLPGALLGGRLADR--IGRKRILIVSVALFGLFSLATAQAWDFPSLLVARLLTGVGLGGALPNLIALT 128 (406)
T ss_pred --HHHHHHHHHHHHHHHHHHHHHHHH--hCCchhHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 999999999999999999999999 9999999999999999999999999999999999999999999999999999
Q ss_pred eeeecCcchhHHHHHHHHHHHHHHHHHHHHH-HhhcCCchhHHHHHHHHHHHHHHhhhceeeecchhHHHhcCCHHHHHH
Q 039541 198 SEMVSKRWRGQVVIIGFTFFSFGLVSLPAVA-YLSRGSSWKMLYVWTSIPSIVCCIIIYPFISESPRWLFIHGHEAEAMA 276 (521)
Q Consensus 198 ~~~~~~~~rg~~~~~~~~~~~~G~~i~~~i~-~~~~~~~wr~~f~~~~~~~~~~~~~~~~~~~esp~~~~~~~~~~~~~~ 276 (521)
.|++|+++|++++++.+.+..+|..+++.++ .+.+..+||+.|++.+++.++..++...++||+|++...+++.++.+.
T Consensus 129 ~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 208 (406)
T PRK11551 129 SEAVGPRLRGTAVSLMYCGVPFGGALASVIGVLAAGDAAWRHIFYVGGVGPLLLVPLLMRWLPESRAFAQAAGAGKQRAP 208 (406)
T ss_pred HHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccCHHHHHHHHHHHHHHHHHHHHHhCCCChhHHhccCcchhhhh
Confidence 9999999999999999999999999999884 666778999999998877666665666678988754322111100000
Q ss_pred HHHHHhhhcCCCCCCCccccccCCCCCccccCCCcccccccHHHHhccHH---HHHHHHHHHHHHHHHHHHHHhHHhhcc
Q 039541 277 VLKRLASRSNYQSDYGLESCCLSNMPPKAKNVIPKLDLYSSLKDLFNRKW---ALRRLLTIMALAFGIGVVYFGLLLGVG 353 (521)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (521)
..+.+++++. .+......+.............|.+.+
T Consensus 209 ----------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 248 (406)
T PRK11551 209 ----------------------------------------VLRALFGEGRATATLLLWISYFFTLIVLYFLLNWLPSLLV 248 (406)
T ss_pred ----------------------------------------hHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1111222111 111111111111222222333455566
Q ss_pred CCCccH---HHHHHHHHHHhHhHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHH
Q 039541 354 NLSFNI---YLSLAFNGLLDIPAYLLTFILIERWSRKSSILTFCILSGTCSAICVAIGDEQEVLQIGLELASFFSACVAF 430 (521)
Q Consensus 354 ~~~~~~---~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 430 (521)
+.+.+. ........++.+++.++.|++.||++||+.+..+.+...++++.+...... +...+..++.+++.....
T Consensus 249 ~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~g~~~~~~~ 326 (406)
T PRK11551 249 GQGLSRSQAGLVQIAFNIGGALGSLLIGALMDRLRPRRVVLLIYAGILASLAALAAAPSF--AGMLLAGFAAGLFVVGGQ 326 (406)
T ss_pred hCCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhcCcH--HHHHHHHHHHHHHHHhHH
Confidence 656543 233445567788999999999999999998888776666666555544432 344555666777777778
Q ss_pred HHHHHhhccccCchhhhhhhHHHHHhhhhhhhHHHHHHHhhc---cchhHHHHHHHHHHHHHhHhhhcc
Q 039541 431 NVLLVFGTELFTTCVRNSTTSLVRQAVNLGAAFSPVLISAGR---QNEFLSFGVFGLVVFCFGFFVVFL 496 (521)
Q Consensus 431 ~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 496 (521)
+...++..|.+|++.|+++.|+.+....+|.+++|.+.|... .++...+...+.+.+++.+..+.+
T Consensus 327 ~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (406)
T PRK11551 327 SVLYALAPLFYPTQVRGTGVGAAVAVGRLGSMAGPLLAGQLLALGRSTVGVIGASIPVILVAALAALLL 395 (406)
T ss_pred HHHHHHHHHHcchhhhhhhhhHHHHhhhHHHHHHhhhHhhhhccCCchHHHHHHHHHHHHHHHHHHHHH
Confidence 888999999999999999999999999999999999998732 223334444444455544444433
No 15
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=100.00 E-value=2e-34 Score=286.17 Aligned_cols=381 Identities=14% Similarity=0.118 Sum_probs=255.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhhccccCCcccccCCcccccCCccccccccCcceecCCCCcceeeecc---eeeCCcc
Q 039541 40 PQFIQVILISLLLIFESQQTFISVYTDEEPTWHCINNTTTCSSSSDICTLSKSAWAWDRPSDTTIISDWS---LECAGSS 116 (521)
Q Consensus 40 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~p~~~c~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~i~~~~~---~~~~~~~ 116 (521)
++++.+...+++.+++.+|...+++. .|.+.++++ .+..+.
T Consensus 19 ~~~~~~~~~~~~~~~~~~d~~~~~~~-----------------------------------~~~l~~~~~~~~~~~~~~- 62 (432)
T PRK10406 19 RRIWAIVGASSGNLVEWFDFYVYSFC-----------------------------------SLYFAHIFFPSGNTTTQL- 62 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-----------------------------------HHHHHHHhCCCCCchHHH-
Confidence 45566777788999999999999999 899999985 333322
Q ss_pred ccchhhHHHHHHHHHHhhhhhhhccccCCCCchHHHHHHHHHHHHHHHHHhccccHH--------HHHHHHHHhhccchh
Q 039541 117 ILSGLPSSCFFIGCLLGGLALSTLGDSSSLGRKKLLFLSCFAMSITALATIFANNIW--------IYSTIRFVAGFFRAP 188 (521)
Q Consensus 117 ~~~~~~~s~~~lg~~i~~~~~g~l~dr~~~Grr~~l~~~~~~~~~~~~~~~~~~~~~--------~l~~~r~l~G~~~g~ 188 (521)
.+.+.+.+..+++..++++++|+++|| +|||+++..++++++++++++++++++. .+++.|+++|++.|+
T Consensus 63 ~~~~~~~~~~~~~~~ig~~~~G~l~Dr--~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~g~g~ 140 (432)
T PRK10406 63 LQTAGVFAAGFLMRPIGGWLFGRIADK--HGRKKSMLISVCMMCFGSLVIACLPGYETIGTWAPALLLLARLFQGLSVGG 140 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHh--cCcHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHhhhhh
Confidence 123445556666777999999999999 9999999999999999999999998874 689999999999999
Q ss_pred hHhhhhhheeeeecCcchhHHHHHHHHHHHHHHHHHHHHHHhh---------cCCchhHHHHHHHHHHHHHHhhhceeee
Q 039541 189 IMTSVIVLLSEMVSKRWRGQVVIIGFTFFSFGLVSLPAVAYLS---------RGSSWKMLYVWTSIPSIVCCIIIYPFIS 259 (521)
Q Consensus 189 ~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~i~~~i~~~~---------~~~~wr~~f~~~~~~~~~~~~~~~~~~~ 259 (521)
.++...+++.|++|+++||++.++.+.+...|.++++.++..+ ..+|||++|++.+++.++.. +....+|
T Consensus 141 ~~~~~~~~i~e~~p~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~F~i~~~~~ll~~-~~~~~~~ 219 (432)
T PRK10406 141 EYGTSATYMSEVAVEGRKGFYASFQYVTLIGGQLLALLVVVVLQQTLEDAELREWGWRIPFALGAVLAVVAL-WLRRQLD 219 (432)
T ss_pred hHhhHHHHHHHhCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhccchHHHHHHHHHHHHHHH-HHHhcCC
Confidence 9999999999999999999999999988888888887664322 25799999999888877765 5556678
Q ss_pred cchhHHHhcCCHHHHHHHHHHHhhhcCCCCCCCccccccCCCCCccccCCCcccccccHHHHhccHHHHHHHHHHHHH-H
Q 039541 260 ESPRWLFIHGHEAEAMAVLKRLASRSNYQSDYGLESCCLSNMPPKAKNVIPKLDLYSSLKDLFNRKWALRRLLTIMAL-A 338 (521)
Q Consensus 260 esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~-~ 338 (521)
|+|++. +. + . . ...++++++++++.+...+..... .
T Consensus 220 e~~~~~-------~~-~------~-~----------------------------~~~~~~~l~~~~~~~~~~~~~~~~~~ 256 (432)
T PRK10406 220 ETSQQE-------TR-A------L-K----------------------------EAGSLKGLWRNRRAFIMVLGFTAAGS 256 (432)
T ss_pred CCchHH-------Hh-h------h-c----------------------------ccccHHHHHhhHHHHHHHHHHHHHHH
Confidence 776421 00 0 0 0 002567788877654433322221 2
Q ss_pred HHHHHHHHhHHhhc-cCCCccHHHH---HHHHHHHhHhHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHh-cC-CchH
Q 039541 339 FGIGVVYFGLLLGV-GNLSFNIYLS---LAFNGLLDIPAYLLTFILIERWSRKSSILTFCILSGTCSAICVA-IG-DEQE 412 (521)
Q Consensus 339 ~~~~~~~~~~~~~~-~~~~~~~~~~---~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~i~~~~~~~-~~-~~~~ 412 (521)
..........|.++ +..+.+.... ..+..+...++..+.|+++||++||+.+.++..+.++....+.. .. ....
T Consensus 257 ~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (432)
T PRK10406 257 LCFYTFTTYMQKYLVNTAGMHANVASGIMTAALFVFMLIQPLIGALSDKIGRRTSMLCFGSLAALFTVPILSALQNVSSP 336 (432)
T ss_pred HHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHcCCcH
Confidence 22222222234433 4455544332 23334555677788899999999999877766554433322211 11 1111
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccccCchhhhhhhHHHHHhhhh-hhhHHHHHHHhhc--cchhHHHHHHHHHHHHH
Q 039541 413 VLQIGLELASFFSACVAFNVLLVFGTELFTTCVRNSTTSLVRQAVNL-GAAFSPVLISAGR--QNEFLSFGVFGLVVFCF 489 (521)
Q Consensus 413 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~-g~~~~p~~~~~~~--~~~~~~~~~~~~~~~~~ 489 (521)
........+..+..+...+..+.+.+|.+|++.|+++.|+.+..+++ ++...|++.+... ..+...+...++..+++
T Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~fp~~~r~t~~g~~~~~g~~~~g~~~p~~~~~l~~~g~~~~~~~~~~~~~~i~ 416 (432)
T PRK10406 337 YAAFGLVMCALLIVSFYTSISGILKAEMFPAQVRALGVGLSYAVANALFGGSAEYVALSLKSIGMETAFFWYVTLMAVVA 416 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCccchhhhHHHHHHHHHHHhHHHHHHHHHHHhCCCcHHHHHHHHHHHHH
Confidence 22222222233333444456778899999999999999999987664 2445777666532 22334455555555555
Q ss_pred hHhhhccccCCCCC
Q 039541 490 GFFVVFLPETIGVT 503 (521)
Q Consensus 490 ~~~~~~~~~~~~~~ 503 (521)
.+..+++ ++++|+
T Consensus 417 ~~~~~~l-~~~~~~ 429 (432)
T PRK10406 417 FLVSLML-HRKGKG 429 (432)
T ss_pred HHHHHHh-hhcccc
Confidence 5554443 334443
No 16
>PRK11663 regulatory protein UhpC; Provisional
Probab=100.00 E-value=3.6e-34 Score=284.35 Aligned_cols=394 Identities=13% Similarity=0.058 Sum_probs=271.0
Q ss_pred CChhHHHHHHHHHHHHHHHHHHHhhhhccccCCcccccCCcccccCCccccccccCcceecCCCCcceeeecceeeCCcc
Q 039541 37 LGLPQFIQVILISLLLIFESQQTFISVYTDEEPTWHCINNTTTCSSSSDICTLSKSAWAWDRPSDTTIISDWSLECAGSS 116 (521)
Q Consensus 37 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~p~~~c~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 116 (521)
.+++++.++....++++...++....+.. +|.+.+++|++.++.
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------------------~~~~~~~~g~s~~~~- 60 (434)
T PRK11663 17 YRYWRRHILITMYLGYALFYFTRKSFNAA-----------------------------------MPEMLADLGLSRSDI- 60 (434)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhhhhHHHh-----------------------------------hHHHHHhcCCCHHHH-
Confidence 34566677777778888888888888888 899999999999666
Q ss_pred ccchhhHHHHHHHHHHhhhhhhhccccCCCCchHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHhhccchhhHhhhhhh
Q 039541 117 ILSGLPSSCFFIGCLLGGLALSTLGDSSSLGRKKLLFLSCFAMSITALATIFANNIWIYSTIRFVAGFFRAPIMTSVIVL 196 (521)
Q Consensus 117 ~~~~~~~s~~~lg~~i~~~~~g~l~dr~~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~ 196 (521)
|++.+.+.++..+++++.|+++|| +|||+++.++.++.+++.+++++++|++.+++.|++.|++.|...+...++
T Consensus 61 ---g~~~~~~~~~~~~~~~~~G~l~dr--~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~ 135 (434)
T PRK11663 61 ---GLLATLFYITYGVSKFVSGIVSDR--SNARYFMGIGLIATGIINILFGFSSSLWAFALLWVLNAFFQGWGWPVCAKL 135 (434)
T ss_pred ---HHHHHHHHHHHHHHHhhhhHHHhh--cCCchhHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHccchHHHHH
Confidence 999999999999999999999999 999999999999999999999999999999999999999999999999999
Q ss_pred eeeeecCcchhHHHHHHHHHHHHHHHHHHHH-HHhhcCCchhHHHHHHHHHHHHHHhhhceeeecchhHHHhcCCHHHHH
Q 039541 197 LSEMVSKRWRGQVVIIGFTFFSFGLVSLPAV-AYLSRGSSWKMLYVWTSIPSIVCCIIIYPFISESPRWLFIHGHEAEAM 275 (521)
Q Consensus 197 i~~~~~~~~rg~~~~~~~~~~~~G~~i~~~i-~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~~~esp~~~~~~~~~~~~~ 275 (521)
+.|++|+++|++++++.+.+..+|.++++.+ +.+.+.++||+.|++.+++.++..++.++++||+|++...+...++.
T Consensus 136 ~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~gw~~~f~~~~i~~~~~~~~~~~~~~~~p~~~~~~~~~~~~- 214 (434)
T PRK11663 136 LTAWYSRTERGGWWAIWNTAHNVGGALIPLVVGAIALHYGWRYGMMIAGIIAIVVGLFLCWRLRDKPQAMGLPSVGEWR- 214 (434)
T ss_pred HHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHcCCCHhhcCCCCccccc-
Confidence 9999999999999999999999999999987 77778889999999988877766545556678877532100000000
Q ss_pred HHHHHHhhhcCCCCCCCccccccCCCCCccccCCCcccccccHH-HHhccHHHHHHHHHHHHHHHHHHHHHHhHHhhc-c
Q 039541 276 AVLKRLASRSNYQSDYGLESCCLSNMPPKAKNVIPKLDLYSSLK-DLFNRKWALRRLLTIMALAFGIGVVYFGLLLGV-G 353 (521)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 353 (521)
. + . .+..++.+.++.+.++.++ ..++++.++...+................|.++ +
T Consensus 215 ---------~--~------~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~ 272 (434)
T PRK11663 215 ---------H--D------A-----LELAQQQEGAGLSRKEILTKYVLLNPYIWLLSFSYVLVYVVRAAINDWGNLYMSE 272 (434)
T ss_pred ---------c--c------c-----cccchhccccCCChhhhHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 0 0 0 0000000000000011121 256677665544444333333333333344444 4
Q ss_pred CCCccHHH---HHHHHHHHhHhHHHHHHHHHhhc--CCchHH-HHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHH
Q 039541 354 NLSFNIYL---SLAFNGLLDIPAYLLTFILIERW--SRKSSI-LTFCILSGTCSAICVAIGDEQEVLQIGLELASFFSAC 427 (521)
Q Consensus 354 ~~~~~~~~---~~~~~~~~~~~~~~~~g~l~dr~--g~~~~~-~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 427 (521)
+.+.+... ......++++++.++.|++.||+ ++|+.. ........+....+...+..+........+..+++..
T Consensus 273 ~~g~s~~~a~~~~~~~~~~~~~g~~~~g~l~dr~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 352 (434)
T PRK11663 273 TLGVDLVTANSAVSMFELGGFIGALVAGWGSDKLFNGNRGPMNLIFAAGILLSVGSLWLMPFASYVMQAACFFTIGFFVF 352 (434)
T ss_pred ccCCCHHHHHHHHHHHHHHHHHHHHHHhhhHHHhccCCccHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHh
Confidence 55665433 33455677889999999999998 333332 2222122222222222222221222222333333322
Q ss_pred HHHHHHHHhhccccCchhhhhhhHHHHHhhhhhhhHHHHHHHh--hccchhHHHHHHHHHHHHHhHhhh
Q 039541 428 VAFNVLLVFGTELFTTCVRNSTTSLVRQAVNLGAAFSPVLISA--GRQNEFLSFGVFGLVVFCFGFFVV 494 (521)
Q Consensus 428 ~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 494 (521)
...........|.+|++.|+++.|+.++..++|.+++|.+.++ ...++...|.+.+++.+++.+...
T Consensus 353 ~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~p~~~g~l~~~~g~~~~f~~~~~~~~~~~~~~~ 421 (434)
T PRK11663 353 GPQMLIGMAAAECSHKEAAGAATGFVGLFAYLGAALSGYPLAKVLEIWHWTGFFVVISIAAGISALLLL 421 (434)
T ss_pred hHHHHHHHHHHhcccHhhHHhHHHHHHHHHHHHHHHhcccHHHHHHhcccHHHHHHHHHHHHHHHHHHH
Confidence 2333445667899999999999999999999999999999986 334567777777777776655443
No 17
>PRK12307 putative sialic acid transporter; Provisional
Probab=100.00 E-value=2e-34 Score=286.79 Aligned_cols=361 Identities=16% Similarity=0.124 Sum_probs=265.1
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHHhhhhccccCCcccccCCcccccCCccccccccCcceecCCCCcceeeecceeeCCc
Q 039541 36 NLGLPQFIQVILISLLLIFESQQTFISVYTDEEPTWHCINNTTTCSSSSDICTLSKSAWAWDRPSDTTIISDWSLECAGS 115 (521)
Q Consensus 36 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~p~~~c~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 115 (521)
+.+++|+..++.+.++++.++++.....+. .|.+++++|+++.+.
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------------------~~~i~~~~~~s~~~~ 55 (426)
T PRK12307 11 EITRPQKNALFSAWLGYVFDGFDFMLIFYI-----------------------------------MYLIKADLGLTDMEG 55 (426)
T ss_pred cCCHHHHHHHHHHHHHHHHHHhHHHHHHHH-----------------------------------HHHHHHHhCCCHHHH
Confidence 455788888889999999999999999999 899999999999776
Q ss_pred cccchhhHHHHHHHHHHhhhhhhhccccCCCCchHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHhhccchhhHhhhhh
Q 039541 116 SILSGLPSSCFFIGCLLGGLALSTLGDSSSLGRKKLLFLSCFAMSITALATIFANNIWIYSTIRFVAGFFRAPIMTSVIV 195 (521)
Q Consensus 116 ~~~~~~~~s~~~lg~~i~~~~~g~l~dr~~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~ 195 (521)
+++.+++.++..+++++.|+++|| +|||+++.++.++.+++.++++++++++.++++|+++|++.|...+....
T Consensus 56 ----~~~~~~~~~~~~l~~~~~g~l~dr--~g~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~ 129 (426)
T PRK12307 56 ----AFLATAAFIGRPFGGALFGLLADK--FGRKPLMMWSIVAYSVGTGLSGLASGVIMLTLSRFIVGMGMAGEYACAST 129 (426)
T ss_pred ----HHHHHHHHHHHHHHHHHHHHHHHH--hCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhHHHHHHH
Confidence 999999999999999999999999 99999999999999999999999999999999999999999999999999
Q ss_pred heeeeecCcchhHHHHHHHHHHHHHHHHHHHH-HHhhcCCchhHHHHHHHHHHHHHHhhhceeeecchhHHHhcCCHHHH
Q 039541 196 LLSEMVSKRWRGQVVIIGFTFFSFGLVSLPAV-AYLSRGSSWKMLYVWTSIPSIVCCIIIYPFISESPRWLFIHGHEAEA 274 (521)
Q Consensus 196 ~i~~~~~~~~rg~~~~~~~~~~~~G~~i~~~i-~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~~~esp~~~~~~~~~~~~ 274 (521)
++.|++|+++|++++++...+..+|.++++.+ +.+.+..+||+.|++..+..++.. ......||++++...+.+
T Consensus 130 ~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~l~~~l~~~~~w~~~f~i~~~~~~~~~-~~~~~~p~~~~~~~~~~~---- 204 (426)
T PRK12307 130 YAVESWPKHLKSKASAFLVSGFGIGNIIAAYFMPSFAEAYGWRAAFFVGLLPVLLVI-YIRARAPESKEWEEAKLS---- 204 (426)
T ss_pred HHHHhCCHhHhhHhhhHHHHHHhHHHHHHHHHHHHHcccCCHHHHHHHHHHHHHHHH-HHHHHCCCChHHHHhhhh----
Confidence 99999999999999999999999999999877 667777899999988654444333 333334555432110000
Q ss_pred HHHHHHHhhhcCCCCCCCccccccCCCCCccccCCCcccccccHHHHhccHHHHHHHHHHHHHHHHH---HHHHHhHHhh
Q 039541 275 MAVLKRLASRSNYQSDYGLESCCLSNMPPKAKNVIPKLDLYSSLKDLFNRKWALRRLLTIMALAFGI---GVVYFGLLLG 351 (521)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~ 351 (521)
. .+.. .+......+.+++++++++.++............. .......|.+
T Consensus 205 --------~-~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (426)
T PRK12307 205 --------G-KGKH------------------SQSAWSVFSLSMKGLFNRAQFPLTLCVFIVLFSIFGANWPIFGLLPTY 257 (426)
T ss_pred --------c-cccc------------------cccchhhhhHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 0000 00000011135677888877654433322222111 1123344555
Q ss_pred ccCCCccHHH---HHHHHHHHhHhHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHH--H
Q 039541 352 VGNLSFNIYL---SLAFNGLLDIPAYLLTFILIERWSRKSSILTFCILSGTCSAICVAIGDEQEVLQIGLELASFFS--A 426 (521)
Q Consensus 352 ~~~~~~~~~~---~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 426 (521)
+++.+.+... ......++.+++.++.+++.||++||+.+..+.++..+..+.+....... ...+..++.+.+ .
T Consensus 258 ~~~~g~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 335 (426)
T PRK12307 258 LAGEGFDTGVVSNLMTAAAFGTVLGNIVWGLCADRIGLKKTFSIGLLMSFLFIFPLFRIPQDN--YLLLGACLFGLMATN 335 (426)
T ss_pred HHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHcccc--HHHHHHHHHHHHHhc
Confidence 5555655433 23445677889999999999999999988888877766655444333221 111222222222 2
Q ss_pred HHHHHHHHHhhccccCchhhhhhhHHHHHhhhhhhhHHHHHHHhh
Q 039541 427 CVAFNVLLVFGTELFTTCVRNSTTSLVRQAVNLGAAFSPVLISAG 471 (521)
Q Consensus 427 ~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~~ 471 (521)
.+..+....++.|.+|++.|+++.|+.+....+|+.++|.+.++.
T Consensus 336 ~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~~~~~gp~~~g~l 380 (426)
T PRK12307 336 VGVGGLVPKFLYDYFPLEVRGLGTGLIYNLAATSGTFNSMAATWL 380 (426)
T ss_pred ccHhHHHHHHHHHhCcHHHHhhhhhHHHHHHhHHHHHHHHHHHHH
Confidence 223455667789999999999999999999999999999999863
No 18
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=100.00 E-value=6.7e-35 Score=295.21 Aligned_cols=420 Identities=21% Similarity=0.207 Sum_probs=281.2
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhccccCCcccccCCcccccCCccccccccCcceecCCCCcceeeecceeeCC----ccc
Q 039541 42 FIQVILISLLLIFESQQTFISVYTDEEPTWHCINNTTTCSSSSDICTLSKSAWAWDRPSDTTIISDWSLECAG----SSI 117 (521)
Q Consensus 42 ~~~~~~~~l~~~~~~~~~~~~~~~~~~p~~~c~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~i~~~~~~~~~~----~~~ 117 (521)
+...+++.++.++..++...+... .|.+..+++.+..+ ...
T Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~-----------------------------------~~~~~~~~~~~~~~~~~~~~~ 71 (481)
T TIGR00879 27 ALLSLIAAIGGLMFGYDTGVIGGA-----------------------------------LALPAFEFKFTSANSDSYSSS 71 (481)
T ss_pred HHHHHHHHHHHHhcccccchhhhh-----------------------------------hhcHHHHHhcCCcccCCCChh
Confidence 344444555667777777777777 77788887776100 014
Q ss_pred cchhhHHHHHHHHHHhhhhhhhccccCCCCchHHHHHHHHHHHHHHHHHhcc---ccHHHHHHHHHHhhccchhhHhhhh
Q 039541 118 LSGLPSSCFFIGCLLGGLALSTLGDSSSLGRKKLLFLSCFAMSITALATIFA---NNIWIYSTIRFVAGFFRAPIMTSVI 194 (521)
Q Consensus 118 ~~~~~~s~~~lg~~i~~~~~g~l~dr~~~Grr~~l~~~~~~~~~~~~~~~~~---~~~~~l~~~r~l~G~~~g~~~~~~~ 194 (521)
+.+++.+++.++..++++++|+++|| +|||++++++.++..++.+++.++ .+++.++++|+++|++.+...+...
T Consensus 72 ~~~~~~~~~~~~~~i~~~~~g~l~d~--~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~ 149 (481)
T TIGR00879 72 LWGLVVSIFLVGGFIGALFAGWLSDR--FGRKKSLLIIALLFVIGAILMGLAAFALSVEMLIVGRVLLGIGVGIASALVP 149 (481)
T ss_pred HHHHHHHHHHHHHHHHHHHhhHhhhh--hhhHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHhhhhHHHhHHH
Confidence 44999999999999999999999999 999999999999999999998554 4566899999999999999999999
Q ss_pred hheeeeecCcchhHHHHHHHHHHHHHHHHHHHHH---Hh-hcCCchhHHHHHHHHHHHHHHhhhceeeecchhHHHhcCC
Q 039541 195 VLLSEMVSKRWRGQVVIIGFTFFSFGLVSLPAVA---YL-SRGSSWKMLYVWTSIPSIVCCIIIYPFISESPRWLFIHGH 270 (521)
Q Consensus 195 ~~i~~~~~~~~rg~~~~~~~~~~~~G~~i~~~i~---~~-~~~~~wr~~f~~~~~~~~~~~~~~~~~~~esp~~~~~~~~ 270 (521)
+++.|++|+++|++++++.+.+..+|.++++.++ .. ....+||+.|++.++..++.. +..+++||+|++...+++
T Consensus 150 ~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~w~~~f~~~~~~~~~~~-~~~~~l~~~~~~~~~~~~ 228 (481)
T TIGR00879 150 MYLSEIAPKALRGALTSLYQLAITFGILVAYGFGSGKVSLNNTLGWRIPLGLQLIPAGLLF-LGLFFLPESPRWLVGKGR 228 (481)
T ss_pred HHHHccCChhhhhhhhhHHHHHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHHH-HHHhcCCCChHHHHHcCC
Confidence 9999999999999999999999999999999987 43 356799999999776666655 666778999988776666
Q ss_pred HHHHHHHHHHHhhhcCCCCCCCccccccCCCCCccccCCCcccccccHHHHhccH--HHHHHHHHHHHHHHH----HHHH
Q 039541 271 EAEAMAVLKRLASRSNYQSDYGLESCCLSNMPPKAKNVIPKLDLYSSLKDLFNRK--WALRRLLTIMALAFG----IGVV 344 (521)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~~~----~~~~ 344 (521)
.+++++..++... .+..........+.... ....+.... ...++++++.. ..+.......+.++. ....
T Consensus 229 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (481)
T TIGR00879 229 VEEARKSLARLRG-TSGEDKELLDELELIDI-KRSIEKRSV---QPSWGSLFSSTRRIRRRLFLGVVLQWFQQFTGINAI 303 (481)
T ss_pred hHHHHHHHHHHhC-CCCCcHHHHHHHHHHHH-HHHHHHhhc---cccHHHHHhcCchhHHHHHHHHHHHHHHHHhCCeeh
Confidence 6555444443311 11110000000000000 000000000 01123333321 112222222222221 2233
Q ss_pred HHhHHhhccCCCccH---HHHHHHHHHHhHhHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHh---cCCch-----HH
Q 039541 345 YFGLLLGVGNLSFNI---YLSLAFNGLLDIPAYLLTFILIERWSRKSSILTFCILSGTCSAICVA---IGDEQ-----EV 413 (521)
Q Consensus 345 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~i~~~~~~~---~~~~~-----~~ 413 (521)
.+..+++.++.+.+. ........++.+++.++.+++.||++||+.+.++..+.+++++++.+ ..... ..
T Consensus 304 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (481)
T TIGR00879 304 MYYSPTIFENAGVSTDHAFLVSIIVGAVNFAFTFVAIFLVDRFGRRPLLLIGAAGMAICLFVLGILGASFVTGSSKSSGN 383 (481)
T ss_pred HHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHhhcccCCcccchhH
Confidence 445566666666554 33444556778889999999999999999998888877777666652 11110 12
Q ss_pred HHHHHHHHHHHHHHH-HHHHHHHhhccccCchhhhhhhHHHHHhhhhhhhHHHHHHHhh--ccchhHHHHHHHHHHHHHh
Q 039541 414 LQIGLELASFFSACV-AFNVLLVFGTELFTTCVRNSTTSLVRQAVNLGAAFSPVLISAG--RQNEFLSFGVFGLVVFCFG 490 (521)
Q Consensus 414 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~~--~~~~~~~~~~~~~~~~~~~ 490 (521)
.......+...+.+. ..+....+..|.+|++.|+++.++.+...++|++++|.+.+.. ..++...|.+.+++++++.
T Consensus 384 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~lg~~i~~~~~~~~~~~~~~~~~f~~~~~~~~~~~ 463 (481)
T TIGR00879 384 VAIVFILLFIAFFAMGWGPVPWVIVSEIFPLSLRPKGISIAVAANWLANFIVGFLFPTMLESIGVGGVFIFFGGLNVLGL 463 (481)
T ss_pred HHHHHHHHHHHHHHccccCeehhhhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccceehhHHHHHHHHH
Confidence 222222333333332 3356677889999999999999999999999999999998752 3356667777777777666
Q ss_pred Hhh-hccccCCCCCC
Q 039541 491 FFV-VFLPETIGVTL 504 (521)
Q Consensus 491 ~~~-~~~~~~~~~~~ 504 (521)
++. ++.||+++++.
T Consensus 464 i~~~~~~~~~~~~~~ 478 (481)
T TIGR00879 464 IFVYFFLPETKGRTL 478 (481)
T ss_pred HHHheecccCCCCCh
Confidence 654 45577665543
No 19
>PRK03545 putative arabinose transporter; Provisional
Probab=100.00 E-value=5.6e-34 Score=279.64 Aligned_cols=341 Identities=14% Similarity=0.054 Sum_probs=256.0
Q ss_pred CcceeeecceeeCCccccchhhHHHHHHHHHHhhhhhhhccccCCCCchHHHHHHHHHHHHHHHHHhccccHHHHHHHHH
Q 039541 101 DTTIISDWSLECAGSSILSGLPSSCFFIGCLLGGLALSTLGDSSSLGRKKLLFLSCFAMSITALATIFANNIWIYSTIRF 180 (521)
Q Consensus 101 ~~~i~~~~~~~~~~~~~~~~~~~s~~~lg~~i~~~~~g~l~dr~~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~ 180 (521)
+|.+.+++|++.++. |++.+.+.+++.+++++.|+++|| +|||+++..+.++.+++++++++++|++.++++|+
T Consensus 32 ~~~l~~~~~~s~~~~----g~~~~~~~~~~~~~~~~~g~l~dr--~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~ 105 (390)
T PRK03545 32 LSDIAQSFHMQTAQV----GLMLTIYAWVVALMSLPLMLLTSN--VERRKLLIGLFVLFIASHVLSALAWNFTVLLISRI 105 (390)
T ss_pred hHHHHhHcCCCHHHH----HHHHHHHHHHHHHHHHHHHHHHcC--CChHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHH
Confidence 789999999999777 999999999999999999999999 99999999999999999999999999999999999
Q ss_pred HhhccchhhHhhhhhheeeeecCcchhHHHHHHHHHHHHHHHHHHHH-HHhhcCCchhHHHHHHHHHHHHHHhhhceeee
Q 039541 181 VAGFFRAPIMTSVIVLLSEMVSKRWRGQVVIIGFTFFSFGLVSLPAV-AYLSRGSSWKMLYVWTSIPSIVCCIIIYPFIS 259 (521)
Q Consensus 181 l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~i~~~i-~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~~~ 259 (521)
++|++.+...+...+++.|++|+++|++++++...+.++|.+++|.+ +.+.+..|||+.|++.+++.++..++.+..+|
T Consensus 106 ~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~l~~~~~~~~~~ 185 (390)
T PRK03545 106 GIAFAHAIFWSITASLAIRVAPAGKKAQALSLLATGTALAMVLGLPLGRVIGQYLGWRTTFLAIGGGALITLLLLIKLLP 185 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHhCChhhhhhHHHHHHHHHHHHHHHHhhHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 99999998999999999999999999999999999999999999998 56667789999999999888777655555566
Q ss_pred cchhHHHhcCCHHHHHHHHHHHhhhcCCCCCCCccccccCCCCCccccCCCcccccccHHHHhccHHHHHHHHHHHHHHH
Q 039541 260 ESPRWLFIHGHEAEAMAVLKRLASRSNYQSDYGLESCCLSNMPPKAKNVIPKLDLYSSLKDLFNRKWALRRLLTIMALAF 339 (521)
Q Consensus 260 esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 339 (521)
|.|+. +.++ ..+.++++++|.++......+....
T Consensus 186 ~~~~~-----~~~~-----------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (390)
T PRK03545 186 LLPSE-----HSGS-----------------------------------------LKSLPLLFRRPALVSLYLLTVVVVT 219 (390)
T ss_pred CCCCC-----Ccch-----------------------------------------HHHHHHHHhCcHHHHHHHHHHHHHH
Confidence 64320 0000 0134567788876654444433333
Q ss_pred HHH-HHHHhHHhhccCCCccHH---HHHHHHHHHhHhHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHhcCCchHHHH
Q 039541 340 GIG-VVYFGLLLGVGNLSFNIY---LSLAFNGLLDIPAYLLTFILIERWSRKSSILTFCILSGTCSAICVAIGDEQEVLQ 415 (521)
Q Consensus 340 ~~~-~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 415 (521)
... ...+..++..+..+.+.. ......+++.+++.++.+++.||++||++. .+..+..++...+..... +.+..
T Consensus 220 ~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~-~~~~~~~~~~~~l~~~~~-~~~~~ 297 (390)
T PRK03545 220 AHFTAYSYIEPFVQQVAGLSENFATLLLLLFGGAGIIGSVLFSRLGNRHPSGFLL-IAIALLLVCLLLLLPAAN-SEWHL 297 (390)
T ss_pred HHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHHHHhhccchhHHH-HHHHHHHHHHHHHHHHhc-hHHHH
Confidence 332 223334444444454432 333455678889999999999999987654 444444444433322222 22445
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhccccCchhhhhhhHHHHHhhhhhhhHHHHHHHh--hccchhHHHHHHHHHHHHHhHhh
Q 039541 416 IGLELASFFSACVAFNVLLVFGTELFTTCVRNSTTSLVRQAVNLGAAFSPVLISA--GRQNEFLSFGVFGLVVFCFGFFV 493 (521)
Q Consensus 416 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 493 (521)
.+..++.+++.....+.......+..| +.|++++|+.+....+|..+||.+.|. ...+....+...+++.+++.+..
T Consensus 298 ~~~~~l~g~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~G~~~~G~~~~~~g~~~~~~~~~~~~~~~~~~~ 376 (390)
T PRK03545 298 SVLSIFWGIAIMCIGLAMQVKVLKLAP-DATDVAMALFSGIFNIGIGAGALLGNQVSLHLGLSSIGYVGAALALAALVWS 376 (390)
T ss_pred HHHHHHHHHHHhcchHHHHHHHHHhCC-CcHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChhHHHHHHHHHHHHHHHHH
Confidence 556666777766555666677777776 577999999999999999999999986 34566777777777777766655
Q ss_pred hcc
Q 039541 494 VFL 496 (521)
Q Consensus 494 ~~~ 496 (521)
...
T Consensus 377 ~~~ 379 (390)
T PRK03545 377 ILI 379 (390)
T ss_pred HHH
Confidence 443
No 20
>PRK09952 shikimate transporter; Provisional
Probab=100.00 E-value=1.9e-33 Score=279.08 Aligned_cols=379 Identities=14% Similarity=0.132 Sum_probs=261.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhhccccCCcccccCCcccccCCccccccccCcceecCCCCcc-eeeec--ceeeCCcc
Q 039541 40 PQFIQVILISLLLIFESQQTFISVYTDEEPTWHCINNTTTCSSSSDICTLSKSAWAWDRPSDTT-IISDW--SLECAGSS 116 (521)
Q Consensus 40 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~p~~~c~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~-i~~~~--~~~~~~~~ 116 (521)
+++..+....++.+++.+|...+++. .|. +.+++ +.++. .
T Consensus 19 ~~~~~~~~~~~~~~~~~~d~~~~~~~-----------------------------------~~~~~~~~~~~~~~~~-~- 61 (438)
T PRK09952 19 RARRAALGSFAGAVVDWYDFLLYGIT-----------------------------------AALVFNREFFPQVSPA-M- 61 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-----------------------------------HHHHHHHhcCCCCCcH-H-
Confidence 34567778888999999999998877 553 44444 45543 2
Q ss_pred ccchhhH-----HHHHHHHHHhhhhhhhccccCCCCchHHHHHHHHHHHHHHHHHhccccHH--------HHHHHHHHhh
Q 039541 117 ILSGLPS-----SCFFIGCLLGGLALSTLGDSSSLGRKKLLFLSCFAMSITALATIFANNIW--------IYSTIRFVAG 183 (521)
Q Consensus 117 ~~~~~~~-----s~~~lg~~i~~~~~g~l~dr~~~Grr~~l~~~~~~~~~~~~~~~~~~~~~--------~l~~~r~l~G 183 (521)
+++. ++.+++..+++++.|+++|| +|||++++++.++++++++++++++|+. .+++.|+++|
T Consensus 62 ---~~~~~~~~~~~~~~~~~~g~~~~G~l~Dr--~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G 136 (438)
T PRK09952 62 ---GTLAAFATFGVGFLFRPLGGVVFGHFGDR--LGRKRMLMLTVWMMGIATALIGLLPSFSTIGWWAPVLLVTLRAIQG 136 (438)
T ss_pred ---HHHHHHHHHHHHHHHHhhHHHHHHHHHHh--hccHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHH
Confidence 4443 45667788999999999999 9999999999999999999999999987 5889999999
Q ss_pred ccchhhHhhhhhheeeeecCcchhHHHHHHHHHHHHHHHHHHHH-HHhh--------cCCchhHHHHHHHHHHHHHHhhh
Q 039541 184 FFRAPIMTSVIVLLSEMVSKRWRGQVVIIGFTFFSFGLVSLPAV-AYLS--------RGSSWKMLYVWTSIPSIVCCIII 254 (521)
Q Consensus 184 ~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~i~~~i-~~~~--------~~~~wr~~f~~~~~~~~~~~~~~ 254 (521)
++.|..++....++.|++|+++|++..+..+.+..+|.+++..+ ..+. ..+|||++|++.+++.++.. ..
T Consensus 137 ~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~g~~~G~~l~~~~~~~l~~~~~~~~~~~~gWr~~f~~~~~~~l~~~-~l 215 (438)
T PRK09952 137 FAVGGEWGGAALLAVESAPKNKKAFYSSGVQVGYGVGLLLSTGLVSLISMMTTDEQFLSWGWRIPFLFSIVLVLIAL-WV 215 (438)
T ss_pred hhhcccHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHhhccChHHHHHHHHHHHHHHH-HH
Confidence 99999999999999999999999999999999999999988766 3332 25799999999888766544 55
Q ss_pred ceeeecchhHHHhcCCHHHHHHHHHHHhhhcCCCCCCCccccccCCCCCccccCCCcccccccHHHHhccHHHHHHHHHH
Q 039541 255 YPFISESPRWLFIHGHEAEAMAVLKRLASRSNYQSDYGLESCCLSNMPPKAKNVIPKLDLYSSLKDLFNRKWALRRLLTI 334 (521)
Q Consensus 255 ~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 334 (521)
...+||+|++...+++.++ . +++ ....+.++++++.+...+..
T Consensus 216 ~~~~~es~~~~~~~~~~~~-----------~-----------------------~~~---~~~~~~l~~~~~~~~~~~~~ 258 (438)
T PRK09952 216 RNGMEESAEFEQQQHEQAA-----------A-----------------------KKR---IPVIEALLRHPGAFLKIIAL 258 (438)
T ss_pred HHhCCCChhHHHHHhhccc-----------c-----------------------ccc---CCHHHHHHHchHHHHHHHHH
Confidence 5567888765321110000 0 000 01123355666544433222
Q ss_pred -HHHHHHHHH-HHHhHHhhccCCCccHH---HHHHHHHHHhHhHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHhc--
Q 039541 335 -MALAFGIGV-VYFGLLLGVGNLSFNIY---LSLAFNGLLDIPAYLLTFILIERWSRKSSILTFCILSGTCSAICVAI-- 407 (521)
Q Consensus 335 -~~~~~~~~~-~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~i~~~~~~~~-- 407 (521)
+...+.... ..+..++..+..+.+.. ....+.++..+++.++.|+++||+|||+.+..+.++..++.+.+...
T Consensus 259 ~~~~~~~~~~~~~~~~~y~~~~~g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~ 338 (438)
T PRK09952 259 RLCELLTMYIVTAFALNYSTQNLGLPRELFLNIGLLVGGLSCLTIPCFAWLADRFGRRRVYITGALIGTLSAFPFFMALE 338 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHH
Confidence 111222222 22333333344454433 22334456667788899999999999998887776655544333221
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHhhccccCchhhhhhhHHHHHhh-hhhhhHHHHHHHhh---c-cchhHHHHHH
Q 039541 408 GDEQEVLQIGLELASFFSACVAFNVLLVFGTELFTTCVRNSTTSLVRQAV-NLGAAFSPVLISAG---R-QNEFLSFGVF 482 (521)
Q Consensus 408 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~-~~g~~~~p~~~~~~---~-~~~~~~~~~~ 482 (521)
.....+......++.+++.+...+..+.+..|.+|++.|+++.++.+... .+|+.++|.+.++. . .++...+...
T Consensus 339 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~p~~~r~tg~g~~~~~~~~lgg~~~p~i~g~l~~~~~~~~~~~~~~~ 418 (438)
T PRK09952 339 AQSIFWIVFFSIMLANIAHDMVVCVQQPMFTEMFGASYRYSGAGVGYQVASVVGGGFTPFIAAALVTYFGGSWHSVAIYL 418 (438)
T ss_pred cCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCcchhHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHH
Confidence 11211233344455567777777888999999999999999999977665 47889999998863 1 2345566667
Q ss_pred HHHHHHHhHhhhcccc
Q 039541 483 GLVVFCFGFFVVFLPE 498 (521)
Q Consensus 483 ~~~~~~~~~~~~~~~~ 498 (521)
+++.+++.+..+.+++
T Consensus 419 ~~~~~i~~v~~~~~~~ 434 (438)
T PRK09952 419 LAGCLISAMTALLMKD 434 (438)
T ss_pred HHHHHHHHHHHHHccc
Confidence 7777777666666655
No 21
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=100.00 E-value=7.5e-34 Score=287.15 Aligned_cols=386 Identities=24% Similarity=0.270 Sum_probs=281.2
Q ss_pred hhhHHHHHHHHHHhhhhhhhccccCCCCchHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHhhccchhhHhhhhhheee
Q 039541 120 GLPSSCFFIGCLLGGLALSTLGDSSSLGRKKLLFLSCFAMSITALATIFANNIWIYSTIRFVAGFFRAPIMTSVIVLLSE 199 (521)
Q Consensus 120 ~~~~s~~~lg~~i~~~~~g~l~dr~~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~ 199 (521)
+|+.+.+.++..++++++|+++|+ +|||+.++++.+++.++.+++++++|+++++++|+++|+|.|+.....+.|++|
T Consensus 92 s~~~s~~~lga~~g~l~~g~l~d~--~GRk~~l~~~~~~~~iG~ii~~~a~~~~~l~~GR~l~G~g~G~~~~~~piy~sE 169 (513)
T KOG0254|consen 92 GLLTSILNLGALVGSLLAGRLGDR--IGRKKTLLLAVVLFLIGAIIIALAPSWYQLIVGRILTGLGVGGASVLAPVYISE 169 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH--hhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhccchhhhhhcchhhHhh
Confidence 899999999999999999999999 999999999999999999999999999999999999999999999999999999
Q ss_pred eecCcchhHHHHHHHHHHHHHHHHHHHHHHhhcCC--chhHHHHHHHHHHHHHHhhhceeeecchhHHHhcCCHHHHHHH
Q 039541 200 MVSKRWRGQVVIIGFTFFSFGLVSLPAVAYLSRGS--SWKMLYVWTSIPSIVCCIIIYPFISESPRWLFIHGHEAEAMAV 277 (521)
Q Consensus 200 ~~~~~~rg~~~~~~~~~~~~G~~i~~~i~~~~~~~--~wr~~f~~~~~~~~~~~~~~~~~~~esp~~~~~~~~~~~~~~~ 277 (521)
+.|++.||...+..+....+|..++..++....+. +||..+.+..+++++..+. .+++||+|+|+.++++.+++++.
T Consensus 170 iap~~~RG~l~~~~~l~~~~Gi~~~~~~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~-~~~~pesp~~L~~~g~~~~a~~~ 248 (513)
T KOG0254|consen 170 IAPAHIRGTLVSLYQLFITIGILLGYCINYGTSKVYAGWRIPLGLALIPAVILALG-MLFLPESPRWLIEKGRLEEAKRS 248 (513)
T ss_pred cCChhhhHHHHHHHHHHHHHHHHHHHHHhhhhccCCccHHHHHHHHHHHHHHHHHH-HHhCCCChHHHHHcCChHHHHHH
Confidence 99999999999999999999999998888777654 8999999999999999844 89999999999999999999999
Q ss_pred HHHHhhhcCCCCCCCccccccCCCCCccccCCCcccccccHHHHhccHHHHHHHHHHHHHHHHH-----HHHHHhHHhhc
Q 039541 278 LKRLASRSNYQSDYGLESCCLSNMPPKAKNVIPKLDLYSSLKDLFNRKWALRRLLTIMALAFGI-----GVVYFGLLLGV 352 (521)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~ 352 (521)
++++.. .+.. + ...+.+++..+.............++++++ |..++..+........+ +...|+.+..+
T Consensus 249 l~~l~g-~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~i~~~l~~fqq~tG~~~~~~Y~~~if 322 (513)
T KOG0254|consen 249 LKRLRG-LSPE-D---VEVELELLKIKLLVEAEVAEGKASWGELFS-PKVRKRLIIGLLLQLFQQLTGINYVFYYSTTIF 322 (513)
T ss_pred HHHHhC-CCCc-c---hHHHHHHHHHHHHHhhhcccccccHHHhcC-cchHHHHHHHHHHHHHHHHhCCceEEeehHHHH
Confidence 998832 2211 1 111111111000000000000113455555 44445444443333322 22334445556
Q ss_pred cCCCcc-H-HHHHHHHHHHhHhHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHhcCCc---------h-HHHHHHHHH
Q 039541 353 GNLSFN-I-YLSLAFNGLLDIPAYLLTFILIERWSRKSSILTFCILSGTCSAICVAIGDE---------Q-EVLQIGLEL 420 (521)
Q Consensus 353 ~~~~~~-~-~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~i~~~~~~~~~~~---------~-~~~~~~~~~ 420 (521)
+..+.+ . .....+.++..+++.+++.++.||+|||++++.+...+.++++++...... . .+..++..+
T Consensus 323 ~~~g~~~~~~~~~~~~~~v~~~~t~~~~~lvd~~gRr~lll~s~~~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (513)
T KOG0254|consen 323 KSAGLKSDTFLASIILGVVNFLGTLVATYLVDRFGRRKLLLFGAAGMSICLVILAVVGVFALYYPNSSKGAGWLAIVFLC 402 (513)
T ss_pred HhcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHhHHHHHHHHHHHHHHHHHhccCCCcccchhHHHHHHHH
Confidence 655543 2 555667778888899999999999999999999999999988877654211 1 123333333
Q ss_pred HHHHH-HHHHHHHHHHhhccccCchhhhhhhHHHHHhhhhhhhHHHHHHHhh--ccchhHHHHHHHHHHHHHhH--hhhc
Q 039541 421 ASFFS-ACVAFNVLLVFGTELFTTCVRNSTTSLVRQAVNLGAAFSPVLISAG--RQNEFLSFGVFGLVVFCFGF--FVVF 495 (521)
Q Consensus 421 ~~~~~-~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~--~~~~ 495 (521)
+.... ..+..++.+.+.+|.+|.+.|+.+.++....+.+.+++-....... ..+....|..++.++.+..+ .+++
T Consensus 403 ~~v~~f~~g~g~v~w~~~sEifp~~~r~~~~s~~~~~n~~~~~~v~~~~~~~~~~~~~~~~f~~f~~~~~~~~~~fv~~~ 482 (513)
T KOG0254|consen 403 LFIFSFAIGWGPVPWVIVSEIFPLRLRSKGASLAVAVNWLWNFLISFFFPFITEALGIGGTFGYFGGICLLSLIIFVFFF 482 (513)
T ss_pred HHHHHHhcccccchhhhhhccCcHhHHhhhHHHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHheEE
Confidence 33322 3334468888999999999999999999999988776554443321 11124445555444444444 5678
Q ss_pred cccCCCCCCCcchHhhhcc
Q 039541 496 LPETIGVTLCDTLDQQEYF 514 (521)
Q Consensus 496 ~~~~~~~~~~~~~~~~~~~ 514 (521)
+||+++++.++.++..++.
T Consensus 483 ~pETkg~sleei~~~~~~~ 501 (513)
T KOG0254|consen 483 VPETKGLTLEEINELFEEG 501 (513)
T ss_pred cccCCCCcHHHHHHHHHcC
Confidence 8999999988877655443
No 22
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=100.00 E-value=7.8e-34 Score=278.03 Aligned_cols=344 Identities=12% Similarity=0.050 Sum_probs=258.5
Q ss_pred CcceeeecceeeCCccccchhhHHHHHHHHHHhhhhhhhccccCCCCchHHHHHHHHHHHHHHHHHhccccHHHHHHHHH
Q 039541 101 DTTIISDWSLECAGSSILSGLPSSCFFIGCLLGGLALSTLGDSSSLGRKKLLFLSCFAMSITALATIFANNIWIYSTIRF 180 (521)
Q Consensus 101 ~~~i~~~~~~~~~~~~~~~~~~~s~~~lg~~i~~~~~g~l~dr~~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~ 180 (521)
.|.+.+++|++.++. |++.+++.++..+++++.|+++|| +|||+++.++.++.+++.+++++++|++.+++.|+
T Consensus 26 ~~~~~~~~~~s~~~~----g~~~s~~~~~~~~~~~~~G~l~d~--~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (377)
T TIGR00890 26 APPLGRYFGVGVTAV----AIWFTLLLIGLAMSMPVGGLLADK--FGPRAVAMLGGILYGLGFTFYAIADSLAALYLTYG 99 (377)
T ss_pred HHHHHHHhCCCHHHH----HHHHHHHHHHHHHHhhhhHHHHHH--cCccchhHHhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 899999999999766 999999999999999999999999 99999999999999999999999999999999999
Q ss_pred HhhccchhhHhhhhhheeeeecCcchhHHHHHHHHHHHHHHHHH-HHHHHhhcCCchhHHHHHHHHHHHHHHhhhceeee
Q 039541 181 VAGFFRAPIMTSVIVLLSEMVSKRWRGQVVIIGFTFFSFGLVSL-PAVAYLSRGSSWKMLYVWTSIPSIVCCIIIYPFIS 259 (521)
Q Consensus 181 l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~i~-~~i~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~~~ 259 (521)
+.|++.+...+.....+.|++| ++|+++.++...+.++|.+++ |+.+.+.+..+||+.|++.+++.++..+..+++++
T Consensus 100 ~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~ 178 (377)
T TIGR00890 100 LASAGVGIAYGIALNTAVKWFP-DKRGLASGIIIGGYGLGSFILSPLITSVINLEGVPAAFIYMGIIFLLVIVLGAFLIG 178 (377)
T ss_pred HHhHHHHHHHHhHHHHHHHHcC-cccHHHHHHHHHhcchhHhHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHhee
Confidence 9999999888888888899987 679999999999999998765 45577777789999999999888887756666666
Q ss_pred cchhHHHhcCCHHHHHHHHHHHhhhcCCCCCCCccccccCCCCCccccCCCcccccccHHHHhccHHHHHHHHHHHHHHH
Q 039541 260 ESPRWLFIHGHEAEAMAVLKRLASRSNYQSDYGLESCCLSNMPPKAKNVIPKLDLYSSLKDLFNRKWALRRLLTIMALAF 339 (521)
Q Consensus 260 esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 339 (521)
++|+... + ++.+ . .+...+.++.++++.++......+...+
T Consensus 179 ~~~~~~~---~--------------~~~~-------------------~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (377)
T TIGR00890 179 YPPGQLI---K--------------TNIE-------------------V---SVKDYTVWEMLRTPQFWVLYLSFFLNAV 219 (377)
T ss_pred cCchhcc---c--------------cCcc-------------------c---chhhhhHHHHHcCccHHHHHHHHHHHhH
Confidence 5442100 0 0000 0 0001245667787776544433333322
Q ss_pred HHHHHHHhHHhhccCCCccHH---HHHHHHHHHhHhHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHhcCCchHHHHH
Q 039541 340 GIGVVYFGLLLGVGNLSFNIY---LSLAFNGLLDIPAYLLTFILIERWSRKSSILTFCILSGTCSAICVAIGDEQEVLQI 416 (521)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 416 (521)
.........+.+.++.+.+.. .......+..++++++.+++.||++||+.+.++..+.+++.+.+...+........
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (377)
T TIGR00890 220 SGLLLIGLYKPYGQSLGLSDGFLVLAVSISSIFNGGGRPFLGALSDKIGRQKTMSIVFGISAVGMAAMLFIPMLNDVLFL 299 (377)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHcccchhHHHH
Confidence 222222222333445554432 33455667788899999999999999999988888888887766655433222333
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccccCchhhhhhhHHHHHhhhhhhhHHHHHHHhh--ccchhHHHHHHHHHHHHHh
Q 039541 417 GLELASFFSACVAFNVLLVFGTELFTTCVRNSTTSLVRQAVNLGAAFSPVLISAG--RQNEFLSFGVFGLVVFCFG 490 (521)
Q Consensus 417 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~~--~~~~~~~~~~~~~~~~~~~ 490 (521)
...++.+++.+...+....+..|.+|+++|+++.|+.+....+|..++|.+.+.. ..++...|.+.+++.+++.
T Consensus 300 ~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~f~~~~~~~~~~~ 375 (377)
T TIGR00890 300 ATVALVFFTWGGTISLFPSLVSDIFGPANSAANYGFLYTAKAVAGIFGGLIASHALTEIGFEYTFIVTGAFALTSL 375 (377)
T ss_pred HHHHHHHHHhccchhccHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHhc
Confidence 4455566666666677778899999999999999999999999999999999863 3456667777666665543
No 23
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=100.00 E-value=1.1e-32 Score=275.12 Aligned_cols=401 Identities=9% Similarity=0.020 Sum_probs=266.7
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHhhhhccccCCcccccCCcccccCCccccccccCcceecCCCCcceeeecceeeCCccc
Q 039541 38 GLPQFIQVILISLLLIFESQQTFISVYTDEEPTWHCINNTTTCSSSSDICTLSKSAWAWDRPSDTTIISDWSLECAGSSI 117 (521)
Q Consensus 38 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~p~~~c~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 117 (521)
++++|.++..+++.......+....++. .|.+.++ |++.++.
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------------------~p~l~~~-g~s~~~~-- 65 (452)
T PRK11273 24 RRLRWQIFLGIFFGYAAYYLVRKNFALA-----------------------------------MPYLVEQ-GFSRGDL-- 65 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHh-----------------------------------hHHHHHc-CCCHHHH--
Confidence 3456666666666666666676667777 7888888 9999777
Q ss_pred cchhhHHHHHHHHHHhhhhhhhccccCCCCchHHHHHHHHHHHHHHHHHhcc----ccHHHHHHHHHHhhccchhhHhhh
Q 039541 118 LSGLPSSCFFIGCLLGGLALSTLGDSSSLGRKKLLFLSCFAMSITALATIFA----NNIWIYSTIRFVAGFFRAPIMTSV 193 (521)
Q Consensus 118 ~~~~~~s~~~lg~~i~~~~~g~l~dr~~~Grr~~l~~~~~~~~~~~~~~~~~----~~~~~l~~~r~l~G~~~g~~~~~~ 193 (521)
|++.+.+.++..++++++|+++|| +|||++++++.++.+++.++++++ .+++.+++.|++.|++.|...+..
T Consensus 66 --g~~~~~~~i~~~~~~~~~G~l~Dr--~g~k~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~gi~~g~~~~~~ 141 (452)
T PRK11273 66 --GFALSGISIAYGFSKFIMGSVSDR--SNPRVFLPAGLILAAAVMLFMGFVPWATSSIAVMFVLLFLCGWFQGMGWPPC 141 (452)
T ss_pred --HHHHHHHHHHHHHHHhhhhhhhhc--cCCchhHHHHHHHHHHHHHHHHhhhcccccHHHHHHHHHHHHHHHhccchHH
Confidence 999999999999999999999999 999999999999999999988876 378899999999999999888888
Q ss_pred hhheeeeecCcchhHHHHHHHHHHHHHH-HHHHHHH-HhhcCCchhHHHHHHHHHHHHHHhhhceeeecchhHHHhcCCH
Q 039541 194 IVLLSEMVSKRWRGQVVIIGFTFFSFGL-VSLPAVA-YLSRGSSWKMLYVWTSIPSIVCCIIIYPFISESPRWLFIHGHE 271 (521)
Q Consensus 194 ~~~i~~~~~~~~rg~~~~~~~~~~~~G~-~i~~~i~-~~~~~~~wr~~f~~~~~~~~~~~~~~~~~~~esp~~~~~~~~~ 271 (521)
...+.|++|+++|++++++++.+.++|. +.+|+++ ......+||+.|++.+++.++..++.++++||+|+....+. .
T Consensus 142 ~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~gw~~~f~i~~~~~~~~~~l~~~~~~~~~~~~~~~~-~ 220 (452)
T PRK11273 142 GRTMVHWWSQKERGGIVSVWNCAHNVGGGLPPLLFLLGMAWFNDWHAALYMPAFAAILVALFAFAMMRDTPQSCGLPP-I 220 (452)
T ss_pred HHHHHHhCChHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHccCCHhhcCCCC-h
Confidence 8889999999999999999999999886 4566653 33334599999999988877776577777888875321111 1
Q ss_pred HHHHHHHHHHhhhcCCCCCCCccccccCCCCCccccCCCccccccc-HHHHhccHHHHHHHHHHHHHHHHHHHHHHhHHh
Q 039541 272 AEAMAVLKRLASRSNYQSDYGLESCCLSNMPPKAKNVIPKLDLYSS-LKDLFNRKWALRRLLTIMALAFGIGVVYFGLLL 350 (521)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (521)
++.+ + +... . .+++++ ++.+..+. .+.+++++.++...+...+............|.
T Consensus 221 ~~~~-------~-~~~~------~-------~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~P~ 278 (452)
T PRK11273 221 EEYK-------N-DYPD------D-------YNEKHE-QELTAKQIFMQYVLPNKLLWYIAIANVFVYLLRYGILDWSPT 278 (452)
T ss_pred hhhh-------h-cccc------c-------cccccC-CCccHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1100 0 0000 0 000000 00000111 233677887776665555555444444444555
Q ss_pred hccC-CCccHHH---HHHHHHHHhHhHHHHHHHHHhhc--CCchHH-HHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHH
Q 039541 351 GVGN-LSFNIYL---SLAFNGLLDIPAYLLTFILIERW--SRKSSI-LTFCILSGTCSAICVAIGDEQEVLQIGLELASF 423 (521)
Q Consensus 351 ~~~~-~~~~~~~---~~~~~~~~~~~~~~~~g~l~dr~--g~~~~~-~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 423 (521)
++++ .+.+... ...+..++.+++.++.|+++||+ +||+.. .....+..++.+.+......+.+...+..++.+
T Consensus 279 ~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~G~l~dr~~~~r~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g 358 (452)
T PRK11273 279 YLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWLNPAGNPTVDMACMIVIG 358 (452)
T ss_pred HHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcchHHHHHHHHHHHHHHHHHHhcccChHHHHHHHHHHH
Confidence 5544 4544332 33445577788999999999999 444432 222233333333332222222222333344444
Q ss_pred HHHHHHHHHHHHhhccccCchhhhhhhHHHHHhhhhhhhH-HHHHHHh--hccchhHHHHHHHHHHHHHhHhhhccccCC
Q 039541 424 FSACVAFNVLLVFGTELFTTCVRNSTTSLVRQAVNLGAAF-SPVLISA--GRQNEFLSFGVFGLVVFCFGFFVVFLPETI 500 (521)
Q Consensus 424 ~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~-~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 500 (521)
+...........+..|.+|++.||+++|+.+....+|+.+ +|.+.|. +..++...|.+++++++++++....+...+
T Consensus 359 ~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~g~~v~g~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~ 438 (452)
T PRK11273 359 FLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVVMIGE 438 (452)
T ss_pred HHHHhHHHHHHHHHHHHcChhhhhhHHHHHHHHHHHHHHHhhhhhHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHhccc
Confidence 4433333344556789999999999999999988888664 7888875 334577778777777777766655544433
Q ss_pred CCC
Q 039541 501 GVT 503 (521)
Q Consensus 501 ~~~ 503 (521)
+|+
T Consensus 439 ~~~ 441 (452)
T PRK11273 439 KRH 441 (452)
T ss_pred cch
Confidence 333
No 24
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=100.00 E-value=8.9e-33 Score=278.55 Aligned_cols=385 Identities=13% Similarity=0.027 Sum_probs=282.0
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhccccCCcccccCCcccccCCccccccccCcceecCCCCcceeeecceeeCCccccch
Q 039541 41 QFIQVILISLLLIFESQQTFISVYTDEEPTWHCINNTTTCSSSSDICTLSKSAWAWDRPSDTTIISDWSLECAGSSILSG 120 (521)
Q Consensus 41 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~p~~~c~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 120 (521)
+|.++..++++.++...|..+++.. +|.+.+|+|.+.++. +
T Consensus 4 ~~~~~~~~~~~~~~~~ld~tiv~~a-----------------------------------~p~i~~~l~~s~~~~----~ 44 (495)
T PRK14995 4 QWLTLVIIVLVYIPVAIDATVLHVA-----------------------------------APTLSMTLGASGNEL----L 44 (495)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHH-----------------------------------HHHHHHHhCCCHhHH----H
Confidence 5778889999999999999999999 999999999999777 9
Q ss_pred hhHHHHHHHHHHhhhhhhhccccCCCCchHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHhhccchhhHhhhhhheeee
Q 039541 121 LPSSCFFIGCLLGGLALSTLGDSSSLGRKKLLFLSCFAMSITALATIFANNIWIYSTIRFVAGFFRAPIMTSVIVLLSEM 200 (521)
Q Consensus 121 ~~~s~~~lg~~i~~~~~g~l~dr~~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~ 200 (521)
|+.+.|.++..++++++|+++|| +|||++++++.++++++++++++++|++.++++|+++|+|.+...+.....+.+.
T Consensus 45 ~~~~~~~l~~~~~~~~~G~l~D~--~Grk~~l~~~~~~~~~~~~~~~~a~~~~~li~~r~l~G~g~~~~~~~~~~~l~~~ 122 (495)
T PRK14995 45 WIIDIYSLVMAGMVLPMGALGDR--IGFKRLLMLGGTLFGLASLAAAFSPTASWLIATRALLAIGAAMIVPATLAGIRAT 122 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH--hccHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999 9999999999999999999999999999999999999999999988888878776
Q ss_pred e-cCcchhHHHHHHHHHHHHHHHHHHHH-HHhhcCCchhHHHHHHHHHHHHHHhhhceeeecchhHHHhcCCHHHHHHHH
Q 039541 201 V-SKRWRGQVVIIGFTFFSFGLVSLPAV-AYLSRGSSWKMLYVWTSIPSIVCCIIIYPFISESPRWLFIHGHEAEAMAVL 278 (521)
Q Consensus 201 ~-~~~~rg~~~~~~~~~~~~G~~i~~~i-~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~~~esp~~~~~~~~~~~~~~~~ 278 (521)
+ |+++|+++++++.....+|..+||.+ +.+.++.+||+.|++...+.++..++..+++||+|+.. +++.+......
T Consensus 123 ~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~l~~~~gwr~~f~i~~~~~~~~~~l~~~~l~~~~~~~--~~~~d~~g~~~ 200 (495)
T PRK14995 123 FTEEKQRNMALGVWAAVGSGGAAFGPLVGGILLEHFYWGSVFLINVPIVLVVMGLTARYVPRQAGRR--DQPLNLGHALM 200 (495)
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHhCCCCCCCC--CCCCChHhHHH
Confidence 5 67999999999999999999999999 67778889999999998888777766667778765321 11111111000
Q ss_pred ------H-HHhhhcCCCCCCCcc-cccc------CCCCCccccCCCcccccccHHHHhccHHHHHHHHHHHHHHHHHHHH
Q 039541 279 ------K-RLASRSNYQSDYGLE-SCCL------SNMPPKAKNVIPKLDLYSSLKDLFNRKWALRRLLTIMALAFGIGVV 344 (521)
Q Consensus 279 ------~-~~~~~~~~~~~~~~~-~~~~------~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 344 (521)
. .... .+...+.... .... ..+......+.+..+.. -..++++++.++...+..+.........
T Consensus 201 ~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~f~~~e~~~~~p~-~~~~lf~~~~~~~~~~~~~~~~~~~~~~ 278 (495)
T PRK14995 201 LIVAILLLVYSA-KTALKGFLSLWVTSLTLLTGALLLGLFIRTQLAASRPM-IDMRLFTHRIILSGVVMAMTAMITLVGF 278 (495)
T ss_pred HHHHHHHHHHHH-HhccccCCchHHHHHHHHHHHHHHHHHHHHHhcCCCCC-cCHHHhCCcccHHHHHHHHHHHHHHHHH
Confidence 0 0000 0000000000 0000 00000000000000111 1246788887666555555554444444
Q ss_pred HHhHHhhccC-CCccHHHH---HHHHHHHhHhHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHhcCC-chHHHHHHHH
Q 039541 345 YFGLLLGVGN-LSFNIYLS---LAFNGLLDIPAYLLTFILIERWSRKSSILTFCILSGTCSAICVAIGD-EQEVLQIGLE 419 (521)
Q Consensus 345 ~~~~~~~~~~-~~~~~~~~---~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~~~~~ 419 (521)
.+..|.+++. .+.++... .....++..++.++.|++.||+|+|+.+..+..+.+++...+..... .+.+......
T Consensus 279 ~~~~~~~lq~v~g~s~~~ag~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~ 358 (495)
T PRK14995 279 ELLMAQELQFVHGLSPLEAGMFMLPVMVASGFSGPIAGILVSRLGLRLVATGGMALSALSFYGLAMTDFSTQQWQAWGLM 358 (495)
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHH
Confidence 4455555543 46555433 34455777889999999999999999888888887777665544332 2224455677
Q ss_pred HHHHHHHHHHHHHHHHhhccccCchhhhhhhHHHHHhhhhhhhHHHHHHHh
Q 039541 420 LASFFSACVAFNVLLVFGTELFTTCVRNSTTSLVRQAVNLGAAFSPVLISA 470 (521)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~ 470 (521)
++.|++.+...+.......+..|++.++.+.++.++...+|+.+|+.+.+.
T Consensus 359 ~l~G~g~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lG~~~G~ai~g~ 409 (495)
T PRK14995 359 ALLGFSAASALLASTSAIMAAAPPEKAAAAGAIETMAYELGAGLGIAIFGL 409 (495)
T ss_pred HHHHHhHHHHHHHHHHHHHhcCCHHhcchHHHHHHHHHHHHHHHHHHHHHH
Confidence 888999888888888888999999999999999999999999999888764
No 25
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=100.00 E-value=1.1e-32 Score=272.56 Aligned_cols=371 Identities=17% Similarity=0.139 Sum_probs=264.2
Q ss_pred CChhHHHHHHHHHHHHHHHHHHHhhhhccccCCcccccCCcccccCCccccccccCcceecCCCCcceeeecceeeCCcc
Q 039541 37 LGLPQFIQVILISLLLIFESQQTFISVYTDEEPTWHCINNTTTCSSSSDICTLSKSAWAWDRPSDTTIISDWSLECAGSS 116 (521)
Q Consensus 37 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~p~~~c~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 116 (521)
..+++|+.+..++++.+.+.++....++. .|.+++++|++.++.
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------------------~~~l~~~~~~s~~~~- 49 (405)
T TIGR00891 6 LTRAQWNAFSAAWLGWLLDAFDFFLVALV-----------------------------------LAEVAGEFGLTTVDA- 49 (405)
T ss_pred CCcccHHHHHHHHHHHHHHHHHHHHHHHH-----------------------------------HHHHHHHhCCChhhH-
Confidence 56788999999999999999999999999 999999999999777
Q ss_pred ccchhhHHHHHHHHHHhhhhhhhccccCCCCchHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHhhccchhhHhhhhhh
Q 039541 117 ILSGLPSSCFFIGCLLGGLALSTLGDSSSLGRKKLLFLSCFAMSITALATIFANNIWIYSTIRFVAGFFRAPIMTSVIVL 196 (521)
Q Consensus 117 ~~~~~~~s~~~lg~~i~~~~~g~l~dr~~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~ 196 (521)
+++.+.+.++..+++++.|+++|| +|||++++++.++.+++.++++++++++.+++.|++.|++.+...+...++
T Consensus 50 ---g~~~~~~~~~~~~~~~~~G~l~Dr--~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~ 124 (405)
T TIGR00891 50 ---ASLISAALISRWFGALMFGLWGDR--YGRRLPMVTSIVLFSAGTLACGFAPGYITMFIARLVIGIGMGGEYGSSAAY 124 (405)
T ss_pred ---HHHHHHHHHHHHHHHHHHHHHHHH--hccHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhhhhhHHHHHH
Confidence 999999999999999999999999 999999999999999999999999999999999999999999999999999
Q ss_pred eeeeecCcchhHHHHHHHHHHHHHHHHHHHH-HHhhcCCc--hhHHHHHHHHHHHHHHhhhceeeecchhHHHhcCCHHH
Q 039541 197 LSEMVSKRWRGQVVIIGFTFFSFGLVSLPAV-AYLSRGSS--WKMLYVWTSIPSIVCCIIIYPFISESPRWLFIHGHEAE 273 (521)
Q Consensus 197 i~~~~~~~~rg~~~~~~~~~~~~G~~i~~~i-~~~~~~~~--wr~~f~~~~~~~~~~~~~~~~~~~esp~~~~~~~~~~~ 273 (521)
+.|++|+++|++++++.+.+..+|.++++.+ +.+.+..+ ||+.|++.++..++.. +....+||++++...+++.++
T Consensus 125 i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~~~w~~~f~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 203 (405)
T TIGR00891 125 VIESWPKHLRNKASGLLISGYAVGAVVAAQVYSLVVPVWGDGWRALFFISILPIIFAL-WLRKNIPEAEDWKEKHAGKAL 203 (405)
T ss_pred HHHhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHH-HHHHhCCCChhHHHHhhhhhh
Confidence 9999999999999999999999999999988 45555444 9999998776666655 555677887754322221111
Q ss_pred HHHHHHHHhhhcCCCCCCCccccccCCCCCccccCCCcccccccHHHHhccHHHHHHHHHHHHH----HHHHHHHHHhHH
Q 039541 274 AMAVLKRLASRSNYQSDYGLESCCLSNMPPKAKNVIPKLDLYSSLKDLFNRKWALRRLLTIMAL----AFGIGVVYFGLL 349 (521)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~----~~~~~~~~~~~~ 349 (521)
.++..++..+ .... .+. ...+.....+...+++ +......... ...........|
T Consensus 204 ~~~~~~~~~~-~~~~----------------~~~--~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (405)
T TIGR00891 204 VRTMVDILYG-GEHR----------------IAN--IVMTLAAAMVQSAGKR--WPTFVYLVVLVLFANLYSHPIQDLLP 262 (405)
T ss_pred hhhHHHHHhc-cchh----------------hhh--hhhhhhHHhhhhhhhh--hHHHHHHHHHHHHHHHHHhhhhhhhH
Confidence 1111111100 0000 000 0000000111111111 1111111111 111111112223
Q ss_pred -hhccCCCccHHH---HHHHHHHHhHhHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHH
Q 039541 350 -LGVGNLSFNIYL---SLAFNGLLDIPAYLLTFILIERWSRKSSILTFCILSGTCSAICVAIGDEQEVLQIGLELASFFS 425 (521)
Q Consensus 350 -~~~~~~~~~~~~---~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 425 (521)
+..++.+.+... ......++.+++.++.+++.||++||+.+..+..+..+........... .+...+..++.+++
T Consensus 263 ~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 341 (405)
T TIGR00891 263 TYLKADLGLSPHTVANIVVFSNIGAIVGGCVFGFLGDWLGRRKAYVCSLLAGQLLIIPVFAIGAN-VAVLGLGLFFQQML 341 (405)
T ss_pred HHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchhhhHHHHHHHHHHHHHHHHhCCc-hHHHHHHHHHHHHH
Confidence 333344554433 3345567788999999999999999998887776654433332222222 13334444555666
Q ss_pred HHHHHHHHHHhhccccCchhhhhhhHHHHHhhhhhhhHHHHHHHhh
Q 039541 426 ACVAFNVLLVFGTELFTTCVRNSTTSLVRQAVNLGAAFSPVLISAG 471 (521)
Q Consensus 426 ~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~~ 471 (521)
.....+....+..|.+|++.|++++|+.+....+|+.++|.+.|..
T Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~g~~~~g~l 387 (405)
T TIGR00891 342 VQGIWGILPKHLGEYFPTDQRAAGLGFTYQLGNLGGALAPIIGALL 387 (405)
T ss_pred HccchhhHHHHHhhhCCcchhHHHhhHHHHHHHHHHHHHHHHHHHH
Confidence 6666777888899999999999999999999999999999999873
No 26
>TIGR00895 2A0115 benzoate transport.
Probab=100.00 E-value=2.8e-32 Score=269.15 Aligned_cols=379 Identities=21% Similarity=0.270 Sum_probs=275.7
Q ss_pred CChhHHHHHHHHHHHHHHHHHHHhhhhccccCCcccccCCcccccCCccccccccCcceecCCCCcceeeecceeeCCcc
Q 039541 37 LGLPQFIQVILISLLLIFESQQTFISVYTDEEPTWHCINNTTTCSSSSDICTLSKSAWAWDRPSDTTIISDWSLECAGSS 116 (521)
Q Consensus 37 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~p~~~c~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 116 (521)
..+++|..+....+..+..+++....++. .|.+.+++|.+..+.
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------------------~~~~~~~~~~~~~~~- 54 (398)
T TIGR00895 11 LSRYQWRAIILSFLIMLMDGYDLAAMGFA-----------------------------------APAISAEWGLDPVQL- 54 (398)
T ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHHhh-----------------------------------HHHHhhccCCCHHHH-
Confidence 45667777777888888888888888888 899999999998666
Q ss_pred ccchhhHHHHHHHHHHhhhhhhhccccCCCCchHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHhhccchhhHhhhhhh
Q 039541 117 ILSGLPSSCFFIGCLLGGLALSTLGDSSSLGRKKLLFLSCFAMSITALATIFANNIWIYSTIRFVAGFFRAPIMTSVIVL 196 (521)
Q Consensus 117 ~~~~~~~s~~~lg~~i~~~~~g~l~dr~~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~ 196 (521)
+++.+.+.++..+++++.|+++|| +|||+++..+.++.+++.++.+++++++.+++.|++.|++.+...+...++
T Consensus 55 ---~~~~~~~~~~~~~~~~~~g~l~d~--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 129 (398)
T TIGR00895 55 ---GFLFSAGLIGMAFGALFFGPLADR--IGRKRVLLWSILLFSVFTLLCALATNVTQLLILRFLAGLGLGGLMPNLNAL 129 (398)
T ss_pred ---HHHHHHHHHHHHHHHHHhHHHHHH--hhhHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHhcccccchhhHHHH
Confidence 999999999999999999999999 999999999999999999999999999999999999999999999999999
Q ss_pred eeeeecCcchhHHHHHHHHHHHHHHHHHHHH-HHhhcCCchhHHHHHHHHHHHHHHhhhceeeecchhHHHhcCCHHHHH
Q 039541 197 LSEMVSKRWRGQVVIIGFTFFSFGLVSLPAV-AYLSRGSSWKMLYVWTSIPSIVCCIIIYPFISESPRWLFIHGHEAEAM 275 (521)
Q Consensus 197 i~~~~~~~~rg~~~~~~~~~~~~G~~i~~~i-~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~~~esp~~~~~~~~~~~~~ 275 (521)
+.|++|+++|++++++...+..+|..+++.+ +.+.+..+||+.|++.++..++..++.+.++||++++...+ +.++.+
T Consensus 130 ~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 208 (398)
T TIGR00895 130 VSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLAGWLIPVFGWRSLFYVGGIAPLLLLLLLMRFLPESIDFLVSK-RPETVR 208 (398)
T ss_pred HHHHcCHHhhchhHhhHhhHHHHHHHHHHHHHHHHhhcccceeehhhhhhHHHHHHHHHHHhCCCCChHHHhc-CHHHHH
Confidence 9999999999999999999999999999988 67778889999999987666666656777789988765444 333333
Q ss_pred HHHHHHhhhcCCCCCCCccccccCCCCCccccCCCcccccccHHHHhccHHHHHHHHHH---HHHHHHHHHHHHhHHhhc
Q 039541 276 AVLKRLASRSNYQSDYGLESCCLSNMPPKAKNVIPKLDLYSSLKDLFNRKWALRRLLTI---MALAFGIGVVYFGLLLGV 352 (521)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~ 352 (521)
+..++... ....+.. +..+.++ .+....+...+.+++++..+...... ..............|++.
T Consensus 209 ~~~~~~~~-~~~~~~~-------~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (398)
T TIGR00895 209 RIVNAIAP-QMQAEAQ-------SALPEQK---ATQGTKRSVFKALFQGKTARITVLLWLLYFMLLVGVYFLTNWLPKLM 277 (398)
T ss_pred HHHHHHHH-hcccccc-------ccccccc---cccchhhHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33333311 1111000 0000000 00011111233344433322222211 111222222333345656
Q ss_pred cCCCccHH---HHHHHHHHHhHhHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHH
Q 039541 353 GNLSFNIY---LSLAFNGLLDIPAYLLTFILIERWSRKSSILTFCILSGTCSAICVAIGDEQEVLQIGLELASFFSACVA 429 (521)
Q Consensus 353 ~~~~~~~~---~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 429 (521)
++.+.+.. .......++.+++.++.+++.||+++|+... +..+.++...++..... +.+...+..++.+++.+..
T Consensus 278 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~ 355 (398)
T TIGR00895 278 VELGFSLSLAATGGALFNFGGVIGSIIFGWLADRLGPRVTAL-LLLLGAVFAVLVGSTLF-SPTLLLLLGAIAGFFVNGG 355 (398)
T ss_pred HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHH-HHHHHHHHHHHHHHHhh-CHHHHHHHHHHHHHHHHHH
Confidence 66665543 3334556778899999999999999985444 33334443333333112 2245566777888888889
Q ss_pred HHHHHHhhccccCchhhhhhhHHHHHhhhhhhhHHHHHHHh
Q 039541 430 FNVLLVFGTELFTTCVRNSTTSLVRQAVNLGAAFSPVLISA 470 (521)
Q Consensus 430 ~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~ 470 (521)
.+...++..|.+|++.|+++.|+.+....+|..++|.+.|+
T Consensus 356 ~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~G~ 396 (398)
T TIGR00895 356 QSGLYALMALFYPTAIRATGVGWAIGIGRLGAIIGPILAGY 396 (398)
T ss_pred HHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHhHHh
Confidence 99999999999999999999999999999999999999875
No 27
>TIGR00893 2A0114 d-galactonate transporter.
Probab=100.00 E-value=1.3e-32 Score=271.34 Aligned_cols=366 Identities=16% Similarity=0.144 Sum_probs=260.3
Q ss_pred CcceeeecceeeCCccccchhhHHHHHHHHHHhhhhhhhccccCCCCchHHHHHHHHHHHHHHHHHhccccHHHHHHHHH
Q 039541 101 DTTIISDWSLECAGSSILSGLPSSCFFIGCLLGGLALSTLGDSSSLGRKKLLFLSCFAMSITALATIFANNIWIYSTIRF 180 (521)
Q Consensus 101 ~~~i~~~~~~~~~~~~~~~~~~~s~~~lg~~i~~~~~g~l~dr~~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~ 180 (521)
.|.+.+++|++..+. +++.+++.++..+++++.|+++|| +|||+++.++.++.+++.+++++++|++.++++|+
T Consensus 17 ~~~~~~~~g~s~~~~----~~~~~~~~~~~~~~~~~~g~l~d~--~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (399)
T TIGR00893 17 APMLQEDLGLSAAQY----GYVFSAFSWGYVVGQFPGGWLLDR--FGARKTLAVFIVIWGVFTGLQAFAGAYVSLYILRV 90 (399)
T ss_pred HHHHHHhhCCChhhH----HHHHHHHHHHHHHHHHhHHHHHHh--cCcceeeHHHHHHHHHHHHHHHHHcCHHHHHHHHH
Confidence 888999999999777 999999999999999999999999 99999999999999999999999999999999999
Q ss_pred HhhccchhhHhhhhhheeeeecCcchhHHHHHHHHHHHHHHHHHHHH-HHhhcCCchhHHHHHHHHHHHHHHhhhceeee
Q 039541 181 VAGFFRAPIMTSVIVLLSEMVSKRWRGQVVIIGFTFFSFGLVSLPAV-AYLSRGSSWKMLYVWTSIPSIVCCIIIYPFIS 259 (521)
Q Consensus 181 l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~i~~~i-~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~~~ 259 (521)
+.|++.+...+....++.|++|+++|++++++.+....+|.++++.+ +.+.+..+||+.|++.+++.++..++.++..|
T Consensus 91 l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (399)
T TIGR00893 91 LLGAAEAPFFPGIILIVASWFPASERATAVSIFNSAQGLGGIIGGPLVGWILIHFSWQWAFIIEGVLGIIWGVLWLKFIP 170 (399)
T ss_pred HHHHHHHhhhhHHHHHHHHhCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHhhheec
Confidence 99999999999999999999999999999999999999999999988 66778889999999998888877756666677
Q ss_pred cchhHHHhcCCHHHHHHHHHHHhhhcCCCCCCCccccccCCCCCccccCCCcccccccHHHHhccHHHHHHHHHHHHHHH
Q 039541 260 ESPRWLFIHGHEAEAMAVLKRLASRSNYQSDYGLESCCLSNMPPKAKNVIPKLDLYSSLKDLFNRKWALRRLLTIMALAF 339 (521)
Q Consensus 260 esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 339 (521)
|+|+.. +...++.++.. .+... .+.+++.++...+...++.+++|.++...+..+....
T Consensus 171 ~~~~~~--~~~~~~~~~~~------~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (399)
T TIGR00893 171 DPPQKA--KWLTEEEKYIV------VGGLL-------------AEQQGKGPSTPKKYQIKELLKDRRVWGLALGQFLVNI 229 (399)
T ss_pred CCCCcc--ccCCHHHHhhc------chhhc-------------cccccccccCCCccchHHHhcCHHHHHHHHHHHHHHh
Confidence 765321 11111111000 00000 0000011111122367788899887766666555555
Q ss_pred HHHHHHHhHHhhcc-CCCccHH---HHHHHHHHHhHhHHHHHHHHHhhcCCch--HHHHHH--HHHHH-HHHHHHhcCCc
Q 039541 340 GIGVVYFGLLLGVG-NLSFNIY---LSLAFNGLLDIPAYLLTFILIERWSRKS--SILTFC--ILSGT-CSAICVAIGDE 410 (521)
Q Consensus 340 ~~~~~~~~~~~~~~-~~~~~~~---~~~~~~~~~~~~~~~~~g~l~dr~g~~~--~~~~~~--~~~~i-~~~~~~~~~~~ 410 (521)
.........+.++. ..+.+.. .......+..+++.++.+++.||++||+ ...... ....+ ..+........
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (399)
T TIGR00893 230 GLGFFLTWFPTYLVQERGLSILEAGFMASLPGIVGFIGMILGGRLSDLLLRRGKSLVFARKTAIIAGLVLSLLMFATNYV 309 (399)
T ss_pred HHHHHHHHHHHHHHHHhcccHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHhccc
Confidence 55555444555543 3454433 3344556778889999999999999986 111111 11111 11111111111
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhccccCchhhhhhhHHHHHhhhhhhhHHHHHHHhh--ccc-hhHHHHHHHHHHH
Q 039541 411 QEVLQIGLELASFFSACVAFNVLLVFGTELFTTCVRNSTTSLVRQAVNLGAAFSPVLISAG--RQN-EFLSFGVFGLVVF 487 (521)
Q Consensus 411 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~~--~~~-~~~~~~~~~~~~~ 487 (521)
......+.....+++.....+....+..|.+|++.|+++.|+.+....+|+.++|.+.+.. ..+ +...+.+.+++.+
T Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~i~g~l~~~~g~~~~~~~~~~~~~~ 389 (399)
T TIGR00893 310 NIPYAALALVALGFFGLGAGAIGWALISDNAPGNIAGLTGGLINSLGNLGGIVGPIVIGAIAATTGSFAGALMVVAALAL 389 (399)
T ss_pred hhHHHHHHHHHHHHhchhhhhHHHHHHHhhcChhHHHHHHHHHHHHHHHhhhhhhHHhhhhccCCCchhHHHHHHHHHHH
Confidence 1122222333333333336789999999999999999999999999999999999999863 234 5666777776666
Q ss_pred HHhHhh
Q 039541 488 CFGFFV 493 (521)
Q Consensus 488 ~~~~~~ 493 (521)
++.+..
T Consensus 390 ~~~~~~ 395 (399)
T TIGR00893 390 IGALSY 395 (399)
T ss_pred HHHHHH
Confidence 655544
No 28
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=100.00 E-value=5.9e-35 Score=268.60 Aligned_cols=424 Identities=17% Similarity=0.218 Sum_probs=300.9
Q ss_pred CChhHHHHHHHHHHHHHHHHHHHhhhhccccCCcccccCCcccccCCccccccccCcceecCCCCcceeeecceeeC---
Q 039541 37 LGLPQFIQVILISLLLIFESQQTFISVYTDEEPTWHCINNTTTCSSSSDICTLSKSAWAWDRPSDTTIISDWSLECA--- 113 (521)
Q Consensus 37 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~p~~~c~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~i~~~~~~~~~--- 113 (521)
..+++...+.+...+.+.+++|.+.++.+ .|-+...|.-..+
T Consensus 35 ~qw~~fk~i~iAG~GfftDsYDlF~I~lV-----------------------------------t~il~~lY~~~~~~~g 79 (538)
T KOG0252|consen 35 LQWKHFKAIIIAGMGFFTDSYDLFSISLV-----------------------------------TKILGYLYYHGDESGG 79 (538)
T ss_pred hhHHHHHHHHHhhhhhcccchhhhhHHHH-----------------------------------HHHHHHHhcCCCCCCC
Confidence 45677778888889999999999999888 4444433211110
Q ss_pred -CccccchhhHHHHHHHHHHhhhhhhhccccCCCCchHHHHHHHHHHHHHHHHHhcccc-------HHHHHHHHHHhhcc
Q 039541 114 -GSSILSGLPSSCFFIGCLLGGLALSTLGDSSSLGRKKLLFLSCFAMSITALATIFANN-------IWIYSTIRFVAGFF 185 (521)
Q Consensus 114 -~~~~~~~~~~s~~~lg~~i~~~~~g~l~dr~~~Grr~~l~~~~~~~~~~~~~~~~~~~-------~~~l~~~r~l~G~~ 185 (521)
--+-..+.+..+..+|.++||+++|+++|| +|||+++...++++.+++++++++.. .+++...|++.|+|
T Consensus 80 ~~ps~i~~~Vn~~A~vGti~GQl~FG~lgD~--~GRK~vYG~~liImIi~t~~~~~s~~~~~~~~~m~~L~~~R~~LGiG 157 (538)
T KOG0252|consen 80 HYPSGVLALVNAAALVGTIFGQLFFGWLGDK--FGRKKVYGKELIIMIICSALSGLSVGTTSPLGVMMTLCFFRFLLGIG 157 (538)
T ss_pred cCCchHHHHHHHHHHHHHHHHHHHHHHHHhh--hcchhhhhHHHHHHHHHHHHhccCCCCCCCcchhhHHHHHHHHhhcc
Confidence 001334888999999999999999999999 99999999999999999998887632 56888999999999
Q ss_pred chhhHhhhhhheeeeecCcchhHHHHHHHHHHHHHHHHHHHHHHhhc----------------CCchhHHHHHHHHHHHH
Q 039541 186 RAPIMTSVIVLLSEMVSKRWRGQVVIIGFTFFSFGLVSLPAVAYLSR----------------GSSWKMLYVWTSIPSIV 249 (521)
Q Consensus 186 ~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~i~~~i~~~~~----------------~~~wr~~f~~~~~~~~~ 249 (521)
.|+-+|.+.+..+|...+++||...+.+.+..++|.+.|.+++.++. +.=||..+.+.++++++
T Consensus 158 IGGDYPlSAtI~SE~an~~~RGa~iaavFa~Qg~GilaG~ivt~Iv~~~fe~~~~~~~~~~~ld~vWRl~~glg~vpa~~ 237 (538)
T KOG0252|consen 158 IGGDYPLSATIMSESANKKTRGAFIAAVFAMQGFGILAGGIVALIVSAIFEKIFNGPSTYPHLDGVWRIIFGLGAVPALL 237 (538)
T ss_pred ccCCCcchHHHhhhhhhhccccceeEEEEEecchhHhhccHHHHHHHHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999888888888877776644321 12499999999999998
Q ss_pred HHhhhceeeecchhHHHhcCC-HHHHHHHHHHHhhhcCCCCCCCccccccCCCCCccccCCCcccccccHHHHhccHHHH
Q 039541 250 CCIIIYPFISESPRWLFIHGH-EAEAMAVLKRLASRSNYQSDYGLESCCLSNMPPKAKNVIPKLDLYSSLKDLFNRKWAL 328 (521)
Q Consensus 250 ~~~~~~~~~~esp~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 328 (521)
.+ ...+.+|||+++.....+ .+.+.+..++. . +. .++.++.. ....+...+....+...+..+ .-
T Consensus 238 ~l-y~Rl~M~Et~~Y~al~~~~~~~a~~d~~k~-----~--~~---~~~~~~~~--~~~~~~~~~~~~~F~~~f~~~-hg 303 (538)
T KOG0252|consen 238 VL-YFRLKMPETARYTALVSKKLKQAAGDMKKV-----L--SV---DIEAESTA--ESDVPPPSNSFGLFSRLFLRW-HG 303 (538)
T ss_pred HH-HhhhcCCcchhHHHHhhcCHhhhhhccccc-----c--cc---ccchhhcc--ccCCCCcccccchHHHHHHHH-HH
Confidence 88 888999999987633222 22221111110 0 00 11111111 011111111111233444433 34
Q ss_pred HHHHHHHHHHHHHHHHHHhHHhhcc----CCCcc----HH--------HHHHHHHHHhHhHHHHHHHHHhhcCCchHHHH
Q 039541 329 RRLLTIMALAFGIGVVYFGLLLGVG----NLSFN----IY--------LSLAFNGLLDIPAYLLTFILIERWSRKSSILT 392 (521)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~----~~--------~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~ 392 (521)
+.++.....|+...+.+|...++.. ..+.. .. ....+.....++|..+...++|++|||++.+.
T Consensus 304 ~~Llgt~~~WFllDiafy~~nL~~s~I~~~ig~~~~~~~~~~~~~vA~~~~iia~~~~vPGyw~tv~~id~iGRk~iq~~ 383 (538)
T KOG0252|consen 304 KHLLGTAGTWFLLDIAFYGQNLFQSVIFSAIGVIPSANTYHELFKVAEGNLIIAVCSTVPGYWFTVYFIDIIGRKYIQLM 383 (538)
T ss_pred HHHHHHHHHHHhhhhhhhccccHHHHHHHhhccCCCcchHHHHHHHHHHHHHHHHHccCCceeEEEEEeehhhhHHHHHh
Confidence 6677788889988888877654432 22211 11 11223334455677788889999999999999
Q ss_pred HHHHHHHHHHHHHhcCCchH--HHHHHHHHHH-HHHHHHHHHHHHHhhccccCchhhhhhhHHHHHhhhhhhhHHHHHHH
Q 039541 393 FCILSGTCSAICVAIGDEQE--VLQIGLELAS-FFSACVAFNVLLVFGTELFTTCVRNSTTSLVRQAVNLGAAFSPVLIS 469 (521)
Q Consensus 393 ~~~~~~i~~~~~~~~~~~~~--~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~ 469 (521)
++.++.+..+.+....++.. ....+...+. .++..+.......+.+|.+|.+.|++..|+....+..|++++.....
T Consensus 384 GF~~~~i~~~~~~~~y~~~~~~~Gf~v~y~l~~ff~NFGPn~ttfivpaE~FParvR~t~hGIsAA~GK~GAivg~~~F~ 463 (538)
T KOG0252|consen 384 GFFIMTIFFFVIAGPYNQLENTIGFVVLYSLTFFFGNFGPNATTFIVPAEIFPARVRSTCHGISAASGKAGAIVGAFGFL 463 (538)
T ss_pred hHHHHHHHHHHHcCCcccccccCceeehHHHHHHHHhcCCCceeEEeehhhchHHHhhhhhhHHHHhccchHHHHHHHhh
Confidence 99999999988887665221 2222333333 33333445678888999999999999999999999999999999887
Q ss_pred hhc-------cchhHHHHHHHHHHHHHhHhhhccccCCCCCCCcchHhh
Q 039541 470 AGR-------QNEFLSFGVFGLVVFCFGFFVVFLPETIGVTLCDTLDQQ 511 (521)
Q Consensus 470 ~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 511 (521)
... .+....+.+++.+.+++.+..+++||++++++++...+.
T Consensus 464 ~~t~~~yp~~~g~~~v~~i~~~~~~~gi~~T~l~pEtk~~~leei~~e~ 512 (538)
T KOG0252|consen 464 YLTDHNYPPNIGVRNVFIILAGCMLLGILFTLLIPETKGKSLEEISNEE 512 (538)
T ss_pred HhhhccCCccccchHHHHHHHHHHHHhHheeEEeecccccCHHHhcChh
Confidence 632 356788999999999999999999999999987764443
No 29
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=100.00 E-value=6e-32 Score=264.80 Aligned_cols=347 Identities=12% Similarity=0.053 Sum_probs=250.6
Q ss_pred CcceeeecceeeCCccccchhhHHHHHHHHHHhhhhhhhccccCCCCchHHHHHHHHHHHHHHHHHhccccHHHHHHHHH
Q 039541 101 DTTIISDWSLECAGSSILSGLPSSCFFIGCLLGGLALSTLGDSSSLGRKKLLFLSCFAMSITALATIFANNIWIYSTIRF 180 (521)
Q Consensus 101 ~~~i~~~~~~~~~~~~~~~~~~~s~~~lg~~i~~~~~g~l~dr~~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~ 180 (521)
+|.+++|+|++.++. |++.+.+.+++.+++++.|+++|| +|||+++..++++.+++.+++++++|++.++++|+
T Consensus 32 lp~i~~~~~~s~~~~----g~~~s~~~~~~~l~~~~~g~l~dr--~G~r~~l~~~~~l~~~~~~~~~~a~~~~~ll~~r~ 105 (393)
T PRK09705 32 LPQLRQASGMSFSVA----ALLTALPVVTMGGLALAGSWLHQH--VSERRSVAISLLLIAVGALMRELYPQSALLLSSAL 105 (393)
T ss_pred HHHHHHHhCCCHHHH----HHHHHHHHHHHHHHhhhhHHHHHH--hCchHHHHHHHHHHHHHHHHHHHCcchHHHHHHHH
Confidence 899999999999777 999999999999999999999999 99999999999999999999999999999999999
Q ss_pred HhhccchhhHhhhhhheeeeecCcchhHHHHHHHHHHHHHHHHHHHH-HHhhcCC-chhHHHHHHHHHHHHHHhhhceee
Q 039541 181 VAGFFRAPIMTSVIVLLSEMVSKRWRGQVVIIGFTFFSFGLVSLPAV-AYLSRGS-SWKMLYVWTSIPSIVCCIIIYPFI 258 (521)
Q Consensus 181 l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~i~~~i-~~~~~~~-~wr~~f~~~~~~~~~~~~~~~~~~ 258 (521)
++|++.+...+....++.+++| ++|+++++++..+..+|..+++.+ +.+.++. +||+.+.+.++..++.. +.++..
T Consensus 106 l~Gig~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~g~~~~~~l~~~~~~w~~~~~~~~~~~~~~~-~~~~~~ 183 (393)
T PRK09705 106 LGGVGIGIIQAVMPSVIKRRFQ-QRTPLVMGLWSAALMGGGGLGAAITPWLVQHSETWYQTLAWWALPAVVAL-FAWWWQ 183 (393)
T ss_pred HHHhHHHHHhhhhhHHHHHHcc-ccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHH-HHHHHH
Confidence 9999999999999999999997 889999999999999999999888 4555553 89998877666554443 222221
Q ss_pred -ecchhHHHhcCCHHHHHHHHHHHhhhcCCCCCCCccccccCCCCCccccCCCcccccccHHHHhccHHHHHHHHHHHHH
Q 039541 259 -SESPRWLFIHGHEAEAMAVLKRLASRSNYQSDYGLESCCLSNMPPKAKNVIPKLDLYSSLKDLFNRKWALRRLLTIMAL 337 (521)
Q Consensus 259 -~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 337 (521)
++.|+ .+.+ ++ ...++.+++++.+...+...+.
T Consensus 184 ~~~~~~---------------------~~~~------------------~~-------~~~~~~l~~~~~~~l~~~~~~~ 217 (393)
T PRK09705 184 SAREVA---------------------SSHK------------------TT-------TTPVRVVFTPRAWTLGVYFGLI 217 (393)
T ss_pred hcCCCc---------------------cccC------------------CC-------cCCcccccCHhHHHHHHHHHHH
Confidence 11110 0000 00 0112334556554444333333
Q ss_pred HHHHHHHHHhHHhhccCCCccHH---HHHHHHHHHhHhHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHhcCCchHHH
Q 039541 338 AFGIGVVYFGLLLGVGNLSFNIY---LSLAFNGLLDIPAYLLTFILIERWSRKSSILTFCILSGTCSAICVAIGDEQEVL 414 (521)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 414 (521)
...........|.++.+.+.+.. ....+.+++.++++++.+++.||++||+....+..+..++...+...+... ..
T Consensus 218 ~~~~~~~~~~lp~~l~~~g~s~~~ag~~~~~~~i~~i~g~~~~g~l~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~ 296 (393)
T PRK09705 218 NGGYASLIAWLPAFYIEIGASAQYSGSLLALMTLGQAAGALLMPAMARHQDRRKLLMLALVLQLVGFCGFIWLPLQL-PV 296 (393)
T ss_pred HHHHHHHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHccchH-HH
Confidence 33333333334444555665543 334556688889999999999999999988888877777766554443322 12
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccccC-chhhhhhhHHHHHhhhhhhhHHHHHHHhhc---cchhHHHHHHHHHHHHHh
Q 039541 415 QIGLELASFFSACVAFNVLLVFGTELFT-TCVRNSTTSLVRQAVNLGAAFSPVLISAGR---QNEFLSFGVFGLVVFCFG 490 (521)
Q Consensus 415 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~r~~~~~~~~~~~~~g~~~~p~~~~~~~---~~~~~~~~~~~~~~~~~~ 490 (521)
...++.+++.+..++.......+..+ ++.+++..|+.+....+++.++|.+.|+.. .++...|.+.+++.++..
T Consensus 297 --~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~gp~~~G~l~~~~g~~~~~~~~~~~~~~~~~ 374 (393)
T PRK09705 297 --LWAMVCGLGLGGAFPLCLLLALDHSVQPAIAGKLVAFMQGIGFIIAGLAPWFSGVLRSISGNYLMDWAFHALCVVGLM 374 (393)
T ss_pred --HHHHHHHHhccchHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHH
Confidence 22344566666777766666667664 678999999999999999999999998732 235566666666555554
Q ss_pred Hh-hhccccCCCCCC
Q 039541 491 FF-VVFLPETIGVTL 504 (521)
Q Consensus 491 ~~-~~~~~~~~~~~~ 504 (521)
+. ....||+++|..
T Consensus 375 ~~~~~~~~~~~~~~~ 389 (393)
T PRK09705 375 IITLRFAPARFPQLW 389 (393)
T ss_pred HHHHHhccccccchh
Confidence 44 345567666543
No 30
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=100.00 E-value=1.7e-31 Score=268.36 Aligned_cols=415 Identities=11% Similarity=0.073 Sum_probs=277.5
Q ss_pred CChhHHHHHHHHHHHHHHHHHHHhhhhccccCCcccccCCcccccC--CccccccccCcceecCCCCcceeeecceeeCC
Q 039541 37 LGLPQFIQVILISLLLIFESQQTFISVYTDEEPTWHCINNTTTCSS--SSDICTLSKSAWAWDRPSDTTIISDWSLECAG 114 (521)
Q Consensus 37 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~p~~~c~~~~~~~~~--~~~~c~~~~~~~~~~~~~~~~i~~~~~~~~~~ 114 (521)
..+.+|.+..+++++..++..|+..++++.. |. +.++ +...|... +++.......|++++..+
T Consensus 13 ~~~~r~~i~~~~~~~~~~~y~dr~~~~~a~~-----~~----~~~~~~~~~~~~~~------~~~~~~~~~~~~~~s~~~ 77 (465)
T TIGR00894 13 FCSFRLFLSFLLHICNVIIIAQRICLSLTMV-----AM----VNKENSTDLACLSA------ENELDNIKNPNFKWSGAL 77 (465)
T ss_pred ccCcHHHHHHHHHHHHHHHHHHHhhheEEEE-----Ec----ccCCCCCCcccccc------ccccccccCCCCCCCHHH
Confidence 5677888889999999998999988887711 11 0000 00111110 111122233478888866
Q ss_pred ccccchhhHHHHHHHHHHhhhhhhhccccCCCCchHHHHHHHHHHHHHHHHHhcc--ccHHHHHHHHHHhhccchhhHhh
Q 039541 115 SSILSGLPSSCFFIGCLLGGLALSTLGDSSSLGRKKLLFLSCFAMSITALATIFA--NNIWIYSTIRFVAGFFRAPIMTS 192 (521)
Q Consensus 115 ~~~~~~~~~s~~~lg~~i~~~~~g~l~dr~~~Grr~~l~~~~~~~~~~~~~~~~~--~~~~~l~~~r~l~G~~~g~~~~~ 192 (521)
. |++.+.+.+++.+++++.|+++|| +|||+++..+.++.+++.+++.++ .+++.+++.|+++|++.+...+.
T Consensus 78 ~----g~~~s~~~~~~~~~~~~~g~l~dr--~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~~~~~~~ 151 (465)
T TIGR00894 78 Q----GLILSSHFYGQIIIQIPVGYLAGK--YVFKWSIGIGMFLSSVISIVIPWAAGGGIALVVFCRVIQGLAQGSVSPA 151 (465)
T ss_pred h----hHHHHHHHHHHHHHHcchHHHHHH--hCcchhhHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHhcccchhh
Confidence 6 999999999999999999999999 999999999999999999887554 56889999999999999999999
Q ss_pred hhhheeeeecCcchhHHHHHHHHHHHHHHHHHHHH-HHhhcC-CchhHHHHHHHHHHHHHHhhhceeeecchhHHHhcCC
Q 039541 193 VIVLLSEMVSKRWRGQVVIIGFTFFSFGLVSLPAV-AYLSRG-SSWKMLYVWTSIPSIVCCIIIYPFISESPRWLFIHGH 270 (521)
Q Consensus 193 ~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~i~~~i-~~~~~~-~~wr~~f~~~~~~~~~~~~~~~~~~~esp~~~~~~~~ 270 (521)
...++.|++|+++|++++++...+..+|.++++.+ +.+... .+||+.|++.+++.++..++.+.+.+|+|+.. +..
T Consensus 152 ~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~l~~~l~~~~~gw~~~f~i~~~~~~~~~~~~~~~~~~~p~~~--~~~ 229 (465)
T TIGR00894 152 THKIIVKWAPPKERSRLLGMSTSGFQLGTFIFLPISGWLCESWGGWPMIFYVFGIVGCAWSLLWFVFPADDPSIH--PCI 229 (465)
T ss_pred HHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCeehhhhhHHHHHHHHHHHHHhcCCcccC--CCC
Confidence 99999999999999999999999999999999988 667777 49999999999988887755556667777421 111
Q ss_pred HHHHHHHHHHHhhhcCCCCCCCccccccCCCCCccccCCCcccccccHHHHhccHHHHHHHHHHHHHHHHHHHHHHhHHh
Q 039541 271 EAEAMAVLKRLASRSNYQSDYGLESCCLSNMPPKAKNVIPKLDLYSSLKDLFNRKWALRRLLTIMALAFGIGVVYFGLLL 350 (521)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (521)
.++.++..++. .+. + ++ +.+.+.+++++++++.++...+..+..........+.+|.
T Consensus 230 ~~~~~~~i~~~---~~~----------------~-~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~ 286 (465)
T TIGR00894 230 SKFEKKYINSS---LQG----------------Q-KG---STRQSLPIKAIPKSLPVWAIWFAIFGHFWLYTILPTYLPT 286 (465)
T ss_pred CHHHHHHHHhh---ccc----------------c-cC---CCCCCCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11111111110 000 0 00 0011236888999998777666665555555444444555
Q ss_pred hc-cCCCccHHHH---HHHHHHHhHhHHHHHHHHHhhcCCchHH--------HHHHHHH--HHHHHHHHhcCCchHHHHH
Q 039541 351 GV-GNLSFNIYLS---LAFNGLLDIPAYLLTFILIERWSRKSSI--------LTFCILS--GTCSAICVAIGDEQEVLQI 416 (521)
Q Consensus 351 ~~-~~~~~~~~~~---~~~~~~~~~~~~~~~g~l~dr~g~~~~~--------~~~~~~~--~i~~~~~~~~~~~~~~~~~ 416 (521)
++ +..+.+.... ..+..++.+++.++.|+++||+++|+.. ..+.... ++..+...... .......
T Consensus 287 ~l~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 365 (465)
T TIGR00894 287 FISWVLRVSGKENGLLSSLPYLFAWLCSIFAGYLADFLKSSKTLSLTAARKIFNGIGGLGPGIFAYALPYLS-AAFYLTI 365 (465)
T ss_pred HHHHHhCcChHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHcC-CchHHHH
Confidence 44 4455554333 3344577788999999999997644211 1111111 11111111111 1112333
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccccCchhhhhhhHHHHHhhhhhhhHHHHHHHhhc-----cchhHHHHHHHHHHHHHhH
Q 039541 417 GLELASFFSACVAFNVLLVFGTELFTTCVRNSTTSLVRQAVNLGAAFSPVLISAGR-----QNEFLSFGVFGLVVFCFGF 491 (521)
Q Consensus 417 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~~~-----~~~~~~~~~~~~~~~~~~~ 491 (521)
+.+.+.+++.+...+.......|..|+ .+|.+.|+.+..+.+|++++|.+.+... ..+...|.+.+++.+++.+
T Consensus 366 ~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~g~~~g~~~~~~~l~~~i~p~l~g~~~~~~~~~~~~~~f~~~~~~~~i~~i 444 (465)
T TIGR00894 366 IILTLANAVSSGPLAGVLINSLDLAPR-FLGFIKGITGLPGFIGGLIASTLAGNILSQDSKNVWLIVFLIMAFVNILCVI 444 (465)
T ss_pred HHHHHHHHHhhhhhhhhhhchhhcChh-HHHHHHHHHHHHHHHHHHHHHHhhheeeCCCCchHHHHHHHHHHHHHHHHHH
Confidence 444444554444555555666677776 7899999999999999999999998632 2255667777777777766
Q ss_pred hhhccccC
Q 039541 492 FVVFLPET 499 (521)
Q Consensus 492 ~~~~~~~~ 499 (521)
+.....+.
T Consensus 445 ~~~~~~~~ 452 (465)
T TIGR00894 445 FYLIFGSA 452 (465)
T ss_pred Heeeeecc
Confidence 65554433
No 31
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=100.00 E-value=1e-31 Score=264.81 Aligned_cols=345 Identities=14% Similarity=0.041 Sum_probs=248.6
Q ss_pred Ccc-eeeecceeeCCccccchhhHHHHHHHHHHhhhhhhhccccCCCCchHHHHHHHHHHHHHHHHHhcc--------cc
Q 039541 101 DTT-IISDWSLECAGSSILSGLPSSCFFIGCLLGGLALSTLGDSSSLGRKKLLFLSCFAMSITALATIFA--------NN 171 (521)
Q Consensus 101 ~~~-i~~~~~~~~~~~~~~~~~~~s~~~lg~~i~~~~~g~l~dr~~~Grr~~l~~~~~~~~~~~~~~~~~--------~~ 171 (521)
+|. +++++|.+..+. |++.+++.++..+++++.|+++|| +|||++++.+.++.+++.+.++++ .+
T Consensus 38 l~~~i~~~~g~s~~~~----g~~~~~~~~~~~i~~~~~G~l~Dr--~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 111 (399)
T PRK05122 38 LPGYVHDQLGFSAFLA----GLVISLQYLATLLSRPHAGRYADT--LGPKKAVVFGLCGCALSGLLYLLAGLLAAWPVLS 111 (399)
T ss_pred HHHHHHHhcCccHHHH----HHHHHHHHHHHHHhchhhHhHHhc--cCCcchHHHHHHHHHHHHHHHHHhhhhhccchhH
Confidence 565 678999999666 999999999999999999999999 999999999999888877766543 25
Q ss_pred HHHHHHHHHHhhccchhhHhhhhhheeeeecCcchhHHHHHHHHHHHHHHHHHHHH-HHhhcCCchhHHHHHHHHHHHHH
Q 039541 172 IWIYSTIRFVAGFFRAPIMTSVIVLLSEMVSKRWRGQVVIIGFTFFSFGLVSLPAV-AYLSRGSSWKMLYVWTSIPSIVC 250 (521)
Q Consensus 172 ~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~i~~~i-~~~~~~~~wr~~f~~~~~~~~~~ 250 (521)
++.+++.|+++|++.+...+...+++.|+.|+++|++++++.+.+..+|.++++.+ +.+.+..|||+.+++.++..++.
T Consensus 112 ~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~~~~~~~~~~~~~~ 191 (399)
T PRK05122 112 LLLLLLGRLLLGIGESLAGTGSILWGIGRVGALHTGRVISWNGIATYGALAIGAPLGVLLYHWGGLAGLGLLIMLLALLG 191 (399)
T ss_pred HHHHHHHHHHHHhhHHhhcchHHHHHHhhcChhhhccchhhhhhhhhHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHH
Confidence 77899999999999999999999999999999999999999999999999999998 56778889999988877665554
Q ss_pred HhhhceeeecchhHHHhcCCHHHHHHHHHHHhhhcCCCCCCCccccccCCCCCccccCCCcccccccHHHHhccHHHHHH
Q 039541 251 CIIIYPFISESPRWLFIHGHEAEAMAVLKRLASRSNYQSDYGLESCCLSNMPPKAKNVIPKLDLYSSLKDLFNRKWALRR 330 (521)
Q Consensus 251 ~~~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 330 (521)
. +.....|++++ .+ ++ +.++++.+++. +..
T Consensus 192 ~-~~~~~~~~~~~-----~~-~~-----------------------------------------~~~~~~~~~~~--~~~ 221 (399)
T PRK05122 192 L-LLARPRPAVPP-----VK-GE-----------------------------------------RLPFRRVLGRV--WPY 221 (399)
T ss_pred H-HHHhcCCCCCC-----CC-cc-----------------------------------------chhHHHHHHHH--HHH
Confidence 4 22222232210 00 00 00122222211 111
Q ss_pred HHHHHHHHHHHHHHHHhHHhhccCCCcc-HHHHHHHHHHHhHhHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHhcCC
Q 039541 331 LLTIMALAFGIGVVYFGLLLGVGNLSFN-IYLSLAFNGLLDIPAYLLTFILIERWSRKSSILTFCILSGTCSAICVAIGD 409 (521)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~i~~~~~~~~~~ 409 (521)
........+.........+.+..+.+.+ .........++.+++.++.+++.||+++|+.+..+..+.+++.+.+...++
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (399)
T PRK05122 222 GMGLALASIGFGTIATFITLYYAARGWDGAALALTLFGVAFVGARLLFGNLINRLGGLRVAIVSLLVEILGLLLLWLAPS 301 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhcc
Confidence 1111122222222222223333333322 223334556777888999999999999999888888877777766665433
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHhhccccCchhhhhhhHHHHHhhhhhhhHHHHHHHhh--ccchhHHHHHHHHHHH
Q 039541 410 EQEVLQIGLELASFFSACVAFNVLLVFGTELFTTCVRNSTTSLVRQAVNLGAAFSPVLISAG--RQNEFLSFGVFGLVVF 487 (521)
Q Consensus 410 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~~--~~~~~~~~~~~~~~~~ 487 (521)
. +...+..++.+++.+..++.......|..|++.|+++.|+.+....+|..++|.+.|.. ..++...+.+.+++.+
T Consensus 302 ~--~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~ 379 (399)
T PRK05122 302 P--WMALIGAALTGFGFSLVFPALGVEAVKRVPPQNRGAALGAYSVFLDLSLGITGPLAGLVASWFGYPSIFLAAALAAL 379 (399)
T ss_pred H--HHHHHHHHHHHHhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHH
Confidence 2 44556677788888888887778888999999999999999999999999888888763 3467777777777777
Q ss_pred HHhHhhhccccCCCCC
Q 039541 488 CFGFFVVFLPETIGVT 503 (521)
Q Consensus 488 ~~~~~~~~~~~~~~~~ 503 (521)
++.+..+.++++++++
T Consensus 380 ~~~~~~~~~~~~~~~~ 395 (399)
T PRK05122 380 LGLALTWLLYRRAPRA 395 (399)
T ss_pred HHHHHHHHhccccccc
Confidence 7766666666544443
No 32
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=100.00 E-value=7.1e-32 Score=270.18 Aligned_cols=383 Identities=14% Similarity=0.088 Sum_probs=259.4
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHHhhhhccccCCcccccCCcccccCCccccccccCcceecCCCCcceeeecceeeCCc
Q 039541 36 NLGLPQFIQVILISLLLIFESQQTFISVYTDEEPTWHCINNTTTCSSSSDICTLSKSAWAWDRPSDTTIISDWSLECAGS 115 (521)
Q Consensus 36 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~p~~~c~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 115 (521)
.+.+.+++.+...++..+...++.....+. .|.+.+++|++.++.
T Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------------------~~~l~~~~gls~~~~ 73 (476)
T PLN00028 29 SFARPHMRAFHLSWISFFTCFVSTFAAAPL-----------------------------------LPIIRDNLNLTKSDI 73 (476)
T ss_pred CCCchHHHHHHHHHHHHHHHHHHHHHHHHH-----------------------------------HHHHHHHcCCCHHHH
Confidence 455566777777777777777777777777 899999999999776
Q ss_pred cccchhhHHHHHHHHHHhhhhhhhccccCCCCchHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHhhccchhhHhhhhh
Q 039541 116 SILSGLPSSCFFIGCLLGGLALSTLGDSSSLGRKKLLFLSCFAMSITALATIFANNIWIYSTIRFVAGFFRAPIMTSVIV 195 (521)
Q Consensus 116 ~~~~~~~~s~~~lg~~i~~~~~g~l~dr~~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~ 195 (521)
+++.+.+.+++.+++++.|+++|| +|||+++..+.++.+++.++++++++++.+++.|++.|++.+... ....
T Consensus 74 ----g~~~~~~~~~~~~~~~~~G~l~dr--~G~r~~~~~~~~~~~~~~~~~~~~~s~~~l~~~r~l~G~~~~~~~-~~~~ 146 (476)
T PLN00028 74 ----GNAGIASVSGSIFSRLAMGPVCDL--YGPRYGSAFLLMLTAPAVFCMSLVSSATGFIAVRFFIGFSLATFV-SCQY 146 (476)
T ss_pred ----HHHHHHHHHHHHHHHHHHHHHHHH--hCChHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhhH-HHHH
Confidence 999999999999999999999999 999999999999999999999999999999999999999987643 4566
Q ss_pred heeeeecCcchhHHHHHHHHHHHHHHHHHHHHH-Hh----hc-----CCchhHHHHHHHHHHHHHHhhhceeeecchhHH
Q 039541 196 LLSEMVSKRWRGQVVIIGFTFFSFGLVSLPAVA-YL----SR-----GSSWKMLYVWTSIPSIVCCIIIYPFISESPRWL 265 (521)
Q Consensus 196 ~i~~~~~~~~rg~~~~~~~~~~~~G~~i~~~i~-~~----~~-----~~~wr~~f~~~~~~~~~~~~~~~~~~~esp~~~ 265 (521)
++.|++|+++||+++++......+|..+++.+. .+ .. ..|||+.|++.+++.++..++.+++.++.|+
T Consensus 147 ~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~gWr~~f~i~g~l~l~~~l~~~~~~~~~p~-- 224 (476)
T PLN00028 147 WMSTMFNGKIVGTANGIAAGWGNLGGGVTQLLMPLVFPLIKDAGAPSFTAWRIAFFVPGLLHIIMGILVLTLGQDLPD-- 224 (476)
T ss_pred HHHHhcChhheeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHHHHHHHHHHHHHcCcCCC--
Confidence 789999999999999999877777766665442 11 11 2589999999998888777444444444432
Q ss_pred HhcCCHHHHHHHHHHHhhhcCCCCCCCccccccCCCCCccccCCCcccccccHHHHhccHHHHHHHHHHHHHHHHHHHHH
Q 039541 266 FIHGHEAEAMAVLKRLASRSNYQSDYGLESCCLSNMPPKAKNVIPKLDLYSSLKDLFNRKWALRRLLTIMALAFGIGVVY 345 (521)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 345 (521)
++.++.+ + . .. .++.+....+++.+++++.+...+..+..........
T Consensus 225 ---~~~~~~~-------~-~-~~--------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (476)
T PLN00028 225 ---GNYRELK-------K-S-GT--------------------MPKDSFSKVLRYGVTNYRTWILALTYGYSFGVELTMD 272 (476)
T ss_pred ---CchhhHH-------h-c-Cc--------------------cccccHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHH
Confidence 1100000 0 0 00 0000001245666777775544333222222212222
Q ss_pred HhHH-hhccCCCccHHH---HHHHHHHHhHhHHHHHHHHHhhcCCch-------HHHHHHHHHHHHHHHHHhcCCchHHH
Q 039541 346 FGLL-LGVGNLSFNIYL---SLAFNGLLDIPAYLLTFILIERWSRKS-------SILTFCILSGTCSAICVAIGDEQEVL 414 (521)
Q Consensus 346 ~~~~-~~~~~~~~~~~~---~~~~~~~~~~~~~~~~g~l~dr~g~~~-------~~~~~~~~~~i~~~~~~~~~~~~~~~ 414 (521)
...| ++.++.+.+... ...+..+++++++++.|+++||++||+ ...+...+.++.++++.... +.+.
T Consensus 273 ~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~~~r~~~~~r~~~~~~~~~l~~i~~~~~~~~~--~~~~ 350 (476)
T PLN00028 273 NIIAEYFYDRFGLSLETAGAIAASFGLMNLFARPAGGYLSDVAARRFGMRGRLWALWIVQTLGGVFCIWLGRAN--SLGA 350 (476)
T ss_pred hHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhcCcchhHHHHHHHHHHHHHHHHHhcccc--hHHH
Confidence 2233 333445655433 334556778899999999999998652 22223333333333222222 1233
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccccCchhhhhhhHHHHHhhhhhhhHHHHHHHhh-ccchhHHHHHHHHHHHHHhHhh
Q 039541 415 QIGLELASFFSACVAFNVLLVFGTELFTTCVRNSTTSLVRQAVNLGAAFSPVLISAG-RQNEFLSFGVFGLVVFCFGFFV 493 (521)
Q Consensus 415 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 493 (521)
..+.+++.+++.+...+..+.+..+..| +.++++.|+.+..+.+|++++|.+.+.. ..++...|.+.+++.+++.++.
T Consensus 351 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~g~lg~~i~~~l~~~~~~~~y~~~f~~~~~~~~i~~~~~ 429 (476)
T PLN00028 351 AIVVMILFSIFVQAACGATFGIVPFVSR-RSLGVISGLTGAGGNVGAVLTQLLFFTGSSYSTETGISLMGVMIIACTLPV 429 (476)
T ss_pred HHHHHHHHHHHHHHhhhhhcccCcccCh-hhchhhhhhhhccccHHHHHHHHHHHhcCCccHhhHHHHHHHHHHHHHHHH
Confidence 4445556666666666677777777655 6789999999998889999999887643 2347778888888888877766
Q ss_pred hccc
Q 039541 494 VFLP 497 (521)
Q Consensus 494 ~~~~ 497 (521)
++++
T Consensus 430 ~~~~ 433 (476)
T PLN00028 430 AFIH 433 (476)
T ss_pred Hhee
Confidence 5553
No 33
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=100.00 E-value=6.7e-31 Score=257.16 Aligned_cols=333 Identities=12% Similarity=0.112 Sum_probs=245.2
Q ss_pred CcceeeecceeeCCccccchhhHHHHHHHHHHhhhhhhhccccCCCCchHHHHHHHHHHHHHHHHHhccccHHHHHHHHH
Q 039541 101 DTTIISDWSLECAGSSILSGLPSSCFFIGCLLGGLALSTLGDSSSLGRKKLLFLSCFAMSITALATIFANNIWIYSTIRF 180 (521)
Q Consensus 101 ~~~i~~~~~~~~~~~~~~~~~~~s~~~lg~~i~~~~~g~l~dr~~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~ 180 (521)
+|.+.+++|+++++. ++..+++.++..+++++.|+++|| +|||++++.+.++.+++.++++++++++.+++.|+
T Consensus 43 l~~~~~~~g~s~~~~----g~~~~~~~~~~~~~~~~~g~l~Dr--~grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~ 116 (394)
T PRK10213 43 LTPMAQDLGISEGVA----GQSVTVTAFVAMFASLFITQTIQA--TDRRYVVILFAVLLTLSCLLVSFANSFSLLLIGRA 116 (394)
T ss_pred HHHHHHHcCCCHHHH----HHHHHHHHHHHHHHHHHHHHHhcc--cCcHHHHHHHHHHHHHHHHHHHHHChHHHHHHHHH
Confidence 788999999999777 999999999999999999999999 99999999999999999999999999999999999
Q ss_pred HhhccchhhHhhhhhheeeeecCcchhHHHHHHHHHHHHHHHHHHHH-HHhhcCCchhHHHHHHHHHHHHHHhhhceeee
Q 039541 181 VAGFFRAPIMTSVIVLLSEMVSKRWRGQVVIIGFTFFSFGLVSLPAV-AYLSRGSSWKMLYVWTSIPSIVCCIIIYPFIS 259 (521)
Q Consensus 181 l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~i~~~i-~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~~~ 259 (521)
++|++.+...+...+++.|++|+++|++++++...+.++|.+++|.+ +.+.+.++||+.|++.+++.++..+.....+|
T Consensus 117 l~G~~~g~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~l~~~~~l~~~~~~p 196 (394)
T PRK10213 117 CLGLALGGFWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPLGSFLGELIGWRNVFNAAAVMGVLCIFWIIKSLP 196 (394)
T ss_pred HHHHhhHHHHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHCC
Confidence 99999999999999999999999999999999999999999999999 56777789999999988777765534444456
Q ss_pred cchhHHHhcCCHHHHHHHHHHHhhhcCCCCCCCccccccCCCCCccccCCCcccccccHHHHhccHHHHHHHHHHHHHHH
Q 039541 260 ESPRWLFIHGHEAEAMAVLKRLASRSNYQSDYGLESCCLSNMPPKAKNVIPKLDLYSSLKDLFNRKWALRRLLTIMALAF 339 (521)
Q Consensus 260 esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 339 (521)
|+|+. + ++ ...+.++.+++|.++...+..+....
T Consensus 197 ~~~~~-----~-~~----------------------------------------~~~~~~~~l~~~~~~~~~~~~~~~~~ 230 (394)
T PRK10213 197 SLPGE-----P-SH----------------------------------------QKQNTFRLLQRPGVMAGMIAIFMSFA 230 (394)
T ss_pred CCCcc-----c-cc----------------------------------------chhHHHHHhcCHHHHHHHHHHHHHHH
Confidence 54310 0 00 00134567788877665444333333
Q ss_pred HHHH-HHHhHHhhccCCCccHHH---HHHHHHHHhHhHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHhcCCchHHHH
Q 039541 340 GIGV-VYFGLLLGVGNLSFNIYL---SLAFNGLLDIPAYLLTFILIERWSRKSSILTFCILSGTCSAICVAIGDEQEVLQ 415 (521)
Q Consensus 340 ~~~~-~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 415 (521)
.... ..+..|.+.++.+.+... .....+++.+++.++.+++.||.+++.............+++...... .+..
T Consensus 231 ~~~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~iig~~~~~~l~~r~~~~~l~~~~~~~~~~~~~l~~~~~~--~~~~ 308 (394)
T PRK10213 231 GQFAFFTYIRPVYMNLAGFGVDGLTLVLLSFGIASFVGTSLSSFILKRSVKLALAGAPLVLAVSALVLTLWGSD--KIVA 308 (394)
T ss_pred HHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHhhh--HHHH
Confidence 3322 233346666666665433 334456778889999999999965443333333323333333322222 2455
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhccccCchhhhhhhHHHHHhhhhhhhHHHHHHHhh--ccchhHHHHHHHHHHHH
Q 039541 416 IGLELASFFSACVAFNVLLVFGTELFTTCVRNSTTSLVRQAVNLGAAFSPVLISAG--RQNEFLSFGVFGLVVFC 488 (521)
Q Consensus 416 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~~--~~~~~~~~~~~~~~~~~ 488 (521)
....++.|++.+...+...+++.+..|++ ++.+.+......++|..+||.+.|.. ..+....+...+.+.++
T Consensus 309 ~~~~~l~G~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~lg~~~G~~l~G~l~~~~g~~~~~~~~~~~~~~ 382 (394)
T PRK10213 309 TGVAIIWGLTFALVPVGWSTWITRSLADQ-AEKAGSIQVAVIQLANTCGAAIGGYALDNIGLTSPLMLSGTLMLL 382 (394)
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHCccc-HHHHHHHHHHHHHHHHHHHHHHHHHHHhccChhhHHHHHHHHHHH
Confidence 56677788888888888888888888744 56777777778889999999999873 23444555554444333
No 34
>PRK03893 putative sialic acid transporter; Provisional
Probab=100.00 E-value=1.7e-31 Score=271.07 Aligned_cols=389 Identities=18% Similarity=0.163 Sum_probs=261.6
Q ss_pred CChhHHHHHHHHHHHHHHHHHHHhhhhccccCCcccccCCcccccCCccccccccCcceecCCCCcceeeecceeeCCcc
Q 039541 37 LGLPQFIQVILISLLLIFESQQTFISVYTDEEPTWHCINNTTTCSSSSDICTLSKSAWAWDRPSDTTIISDWSLECAGSS 116 (521)
Q Consensus 37 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~p~~~c~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 116 (521)
..+.+|+.+..++++.+++.++....++. .|.+.+++|++.++.
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------------------~~~i~~~~~~s~~~~- 57 (496)
T PRK03893 14 LNRAQWKAFSAAWLGYLLDGFDFVLITLV-----------------------------------LTEVQGEFGLTTVQA- 57 (496)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------------------------------HHHHHHHhCCCHHHH-
Confidence 34567888888999999999999999988 899999999999776
Q ss_pred ccchhhHHHHHHHHHHhhhhhhhccccCCCCchHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHhhccchhhHhhhhhh
Q 039541 117 ILSGLPSSCFFIGCLLGGLALSTLGDSSSLGRKKLLFLSCFAMSITALATIFANNIWIYSTIRFVAGFFRAPIMTSVIVL 196 (521)
Q Consensus 117 ~~~~~~~s~~~lg~~i~~~~~g~l~dr~~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~ 196 (521)
+++.+.+.++..+++++.|+++|| +|||++++++.++.+++.++.+++++++.+++.|++.|++.+...+....+
T Consensus 58 ---~~~~~~~~~~~~~~~~~~g~l~dr--~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~ 132 (496)
T PRK03893 58 ---ASLISAAFISRWFGGLLLGAMGDR--YGRRLAMVISIVLFSVGTLACGFAPGYWTLFIARLVIGMGMAGEYGSSATY 132 (496)
T ss_pred ---HHHHHHHHHHHHHHHHHHHHHHHH--hCcHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999 999999999999999999999999999999999999999999999999999
Q ss_pred eeeeecCcchhHHHHHHHHHHHHHHHHHHHH-HHhhcCCchhHHHHHHHHHHHHHHhhhceeeecchhHHHhcCCHHHHH
Q 039541 197 LSEMVSKRWRGQVVIIGFTFFSFGLVSLPAV-AYLSRGSSWKMLYVWTSIPSIVCCIIIYPFISESPRWLFIHGHEAEAM 275 (521)
Q Consensus 197 i~~~~~~~~rg~~~~~~~~~~~~G~~i~~~i-~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~~~esp~~~~~~~~~~~~~ 275 (521)
+.|++|+++|++++++...+..+|..++|.+ +.+.+..+||+.|++.++..++.. +....+||++++...+++.++.+
T Consensus 133 ~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w~~~f~~~~~~~~~~~-~~~~~~p~~~~~~~~~~~~~~~~ 211 (496)
T PRK03893 133 VIESWPKHLRNKASGFLISGFSIGAVVAAQVYSLVVPVWGWRALFFIGILPIIFAL-WLRKNLPEAEDWKEKHAGKAPVR 211 (496)
T ss_pred HHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHH-HHHHhCCCchhhhhhccccccch
Confidence 9999999999999999999999999999988 677788899999987655544443 44555677654322111110000
Q ss_pred HHHHHHhhhcCCCCCCCccccccCCCCCccccCCCcccccccHHHHhc---------------------------cHHHH
Q 039541 276 AVLKRLASRSNYQSDYGLESCCLSNMPPKAKNVIPKLDLYSSLKDLFN---------------------------RKWAL 328 (521)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~---------------------------~~~~~ 328 (521)
+..+...+ .+.. .................+. ++..+
T Consensus 212 ~~~~~~~~-~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (496)
T PRK03893 212 TMVDILYR-GEHR----------------IINILLTLAAAAALWFCFAGNLQNAAIVAVLGLLCAAIFISFMVQSSGKRW 274 (496)
T ss_pred hHHHHHhc-chhH----------------HHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHHHHHHHHHhcccch
Confidence 00000000 0000 0000000000000000000 00000
Q ss_pred HHHHHHHHHHHHHH----HHHHhHHhhc-cCCCccHHH---HHHHHHHHhHhHHHHHHHHHhhcCCchHHHHHHHHHHHH
Q 039541 329 RRLLTIMALAFGIG----VVYFGLLLGV-GNLSFNIYL---SLAFNGLLDIPAYLLTFILIERWSRKSSILTFCILSGTC 400 (521)
Q Consensus 329 ~~~~~~~~~~~~~~----~~~~~~~~~~-~~~~~~~~~---~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~i~ 400 (521)
..........+... .....+|.++ ++.+.+... ......++.+++.++.|++.||++||+.+..+..+..+.
T Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~ 354 (496)
T PRK03893 275 PTGVMLMVVVLFAFLYSWPIQALLPTYLKTDLGYDPHTVANVLFFSGFGAAVGCCVGGFLGDWLGTRKAYVCSLLISQLL 354 (496)
T ss_pred hHHHHHHHHHHHHHhccchHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHH
Confidence 00000000000000 1112345555 466665433 334556778889999999999999999888877666655
Q ss_pred HHHHHhcCCchHHHHHHHHHHHHHHHHHHHHHHHHhhccccCchhhhhhhHHHHHhhhhhhhHHHHHHHhh--ccchhHH
Q 039541 401 SAICVAIGDEQEVLQIGLELASFFSACVAFNVLLVFGTELFTTCVRNSTTSLVRQAVNLGAAFSPVLISAG--RQNEFLS 478 (521)
Q Consensus 401 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~~--~~~~~~~ 478 (521)
.+.+........+......++.++......+....+..|.+|++.|++++|+.+....+|+.++|.+.|.. ..++...
T Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~lgp~l~g~l~~~~g~~~~ 434 (496)
T PRK03893 355 IIPVFAIGGANVWVLGLLLFFQQMLGQGISGLLPKLIGGYFDTEQRAAGLGFTYNVGALGGALAPILGALIAQRLDLGTA 434 (496)
T ss_pred HHHHhhccccHHHHHHHHHHHHHHHhcccchhhHHHHHhhCCHHHhhcccchhhhhhhHHHHHHHHHHHHHhccCChHHH
Confidence 54443333332222222223333333334456677889999999999999999999999999999999863 2344444
Q ss_pred HHHHHH
Q 039541 479 FGVFGL 484 (521)
Q Consensus 479 ~~~~~~ 484 (521)
+...+.
T Consensus 435 ~~~~~~ 440 (496)
T PRK03893 435 LASLSF 440 (496)
T ss_pred HHHHHH
Confidence 444433
No 35
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=100.00 E-value=5.6e-31 Score=254.83 Aligned_cols=369 Identities=11% Similarity=0.039 Sum_probs=268.4
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhhhccccCCcccccCCcccccCCccccccccCcceecCCCCcceee-ecceeeCCccc
Q 039541 39 LPQFIQVILISLLLIFESQQTFISVYTDEEPTWHCINNTTTCSSSSDICTLSKSAWAWDRPSDTTIIS-DWSLECAGSSI 117 (521)
Q Consensus 39 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~p~~~c~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~i~~-~~~~~~~~~~~ 117 (521)
+-.++.+.+..++.+.........+++ .+.+.+ ++|++.+|.
T Consensus 30 ~~a~r~l~~s~~~f~~~F~~w~~~~~l-----------------------------------~~~~~~~~~~ls~~q~-- 72 (462)
T PRK15034 30 HIARRNLWISVSCLLLAFCVWMLFSAV-----------------------------------TVNLNKIGFNFTTDQL-- 72 (462)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHH-----------------------------------HHHhhhhhcCCCHHHH--
Confidence 445667777777877877888888887 777766 899999777
Q ss_pred cchhhHHHHHHHHHHhhhhhhhccccCCCCchHHHHHHHHHHHHHHHHHhcc-----ccHHHHHHHHHHhhccchhhHhh
Q 039541 118 LSGLPSSCFFIGCLLGGLALSTLGDSSSLGRKKLLFLSCFAMSITALATIFA-----NNIWIYSTIRFVAGFFRAPIMTS 192 (521)
Q Consensus 118 ~~~~~~s~~~lg~~i~~~~~g~l~dr~~~Grr~~l~~~~~~~~~~~~~~~~~-----~~~~~l~~~r~l~G~~~g~~~~~ 192 (521)
+++.+++.+++.++.++.|++.|| +|.|+++.++.++.++.+++.+++ +|++.+++.|++.|++ |..++.
T Consensus 73 --g~l~ai~~l~~al~rip~G~l~Dr--~G~R~v~~~~~ll~~i~~~~~~~a~~~~~~s~~~lli~r~l~Gig-g~~f~~ 147 (462)
T PRK15034 73 --FLLTALPSVSGALLRVPYSFMVPI--FGGRRWTVFSTAILIIPCVWLGIAVQNPNTPFGIFIVIALLCGFA-GANFAS 147 (462)
T ss_pred --HHHHHHHHHHHHHHHHHHHHHHHH--hCChHHHHHHHHHHHHHHHHHHHHHcccCCCHHHHHHHHHHHHHH-HHhHHH
Confidence 999999999999999999999999 999999999999999999999987 8999999999999998 778999
Q ss_pred hhhheeeeecCcchhHHHHHHHHHHHHHHHHHHHHH-----H-hhc-------------CCchhHHHHHHHHHHHHHHhh
Q 039541 193 VIVLLSEMVSKRWRGQVVIIGFTFFSFGLVSLPAVA-----Y-LSR-------------GSSWKMLYVWTSIPSIVCCII 253 (521)
Q Consensus 193 ~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~i~~~i~-----~-~~~-------------~~~wr~~f~~~~~~~~~~~~~ 253 (521)
....+++|+|+++||+++|+.....++|..+++++. . +.. ..+||...++..++.++..++
T Consensus 148 ~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l~~~l~p~~i~~~l~~~~G~~~~~~~~g~~~~~~~~~~~~~~~~iv~~i~ 227 (462)
T PRK15034 148 SMGNISFFFPKAKQGSALGINGGLGNLGVSVMQLVAPLVIFVPVFAFLGVNGVPQADGSVMSLANAAWIWVPLLAIATIA 227 (462)
T ss_pred HHHHHHHHCCHhHhHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhccccccccccchHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999766666665544331 1 111 334888888888877777756
Q ss_pred hceeeecchhHHHhcCCHHHHHHHHHHHhhhcCCCCCCCccccccCCCCCccccCCCcccccccHHHHhccHHHHHHHHH
Q 039541 254 IYPFISESPRWLFIHGHEAEAMAVLKRLASRSNYQSDYGLESCCLSNMPPKAKNVIPKLDLYSSLKDLFNRKWALRRLLT 333 (521)
Q Consensus 254 ~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 333 (521)
.++++++.|.. +. ...+.++.+|+|+.|...+.
T Consensus 228 ~~~~~~~~~~~---~~--------------------------------------------~~~~~~~vlk~~~~Wllsll 260 (462)
T PRK15034 228 AWSGMNDIASS---RA--------------------------------------------SIADQLPVLQRLHLWLLSLL 260 (462)
T ss_pred HHHhCCCcccc---cc--------------------------------------------CHHHHHHHhCCCchhHHHHH
Confidence 66655543310 00 00245678899987776666
Q ss_pred HHHHHHHHHHHHHhHHhhccC-CCc-cHHHHHHHHHHHhHhHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHH-hcCCc
Q 039541 334 IMALAFGIGVVYFGLLLGVGN-LSF-NIYLSLAFNGLLDIPAYLLTFILIERWSRKSSILTFCILSGTCSAICV-AIGDE 410 (521)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~i~~~~~~-~~~~~ 410 (521)
.+..+.......+.+|++.++ ++. +......+..+...++++++|+++||+|+++++.++++.+.++..... ..+..
T Consensus 261 y~~tFG~fvg~s~~lp~~~~~~~~~~~~l~~~~l~~l~~~l~rplgG~LADRiG~~~vl~~~~i~~~i~~~~~~l~lp~~ 340 (462)
T PRK15034 261 YLATFGSFIGFSAGFAMLAKTQFPDVNILRLAFFGPFIGAIARSVGGAISDKFGGVRVTLINFIFMAIFSALLFLTLPGT 340 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHhhHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhccc
Confidence 655554444445455555544 211 122223344566778889999999999999999988887777654332 22221
Q ss_pred ---hHHHHHHHHHHHHHHHHHHHHHHHHhhccccCc---------------------hhhhhhhHHHHHhhhhhhhHHHH
Q 039541 411 ---QEVLQIGLELASFFSACVAFNVLLVFGTELFTT---------------------CVRNSTTSLVRQAVNLGAAFSPV 466 (521)
Q Consensus 411 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------~~r~~~~~~~~~~~~~g~~~~p~ 466 (521)
+.+...+.++...++.+......+-++.+.+|+ ++.|.+.|+....+.+|+++.|.
T Consensus 341 ~~~~~~~~~~~~~~l~~~~G~gngsvfk~ip~~f~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~G~v~a~G~~Ggf~~p~ 420 (462)
T PRK15034 341 GSGNFIAFYAVFMGLFLTAGLGSGSTFQMIAVIFRQITIYRVKMKGGSDEQAQREAVTETAAALGFISAIGAVGGFFIPQ 420 (462)
T ss_pred cccHHHHHHHHHHHHHHHhcccchHHHHhhHHHHhhhhhhcccccccchhHHhhHHHHHHHHHHHHHHHHHHcccchhhH
Confidence 123444444445556666667777777777774 14588899999999999999998
Q ss_pred HHHhh---ccchhHHHHHHHHHHHHHhHhhhcc
Q 039541 467 LISAG---RQNEFLSFGVFGLVVFCFGFFVVFL 496 (521)
Q Consensus 467 ~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 496 (521)
+.+.. ..++...+..+.+..+++.++.++.
T Consensus 421 ~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~w~~ 453 (462)
T PRK15034 421 AFGMSLNMTGSPVGAMKVFLIFYIVCVLLTWLV 453 (462)
T ss_pred HHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHH
Confidence 88753 2446667777777777766664443
No 36
>PRK15075 citrate-proton symporter; Provisional
Probab=100.00 E-value=6.9e-31 Score=261.00 Aligned_cols=347 Identities=15% Similarity=0.109 Sum_probs=233.8
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhccccCCcccccCCcccccCCccccccccCcceecCCCCcceeeecceeeCCccccch
Q 039541 41 QFIQVILISLLLIFESQQTFISVYTDEEPTWHCINNTTTCSSSSDICTLSKSAWAWDRPSDTTIISDWSLECAGSSILSG 120 (521)
Q Consensus 41 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~p~~~c~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 120 (521)
+++....++++.+++.+|...+++. .|.+.+|++.++.+. +
T Consensus 13 ~~~~~~~~~~~~~~~~~d~~~~~~~-----------------------------------~~~i~~~~~~~~~~~----~ 53 (434)
T PRK15075 13 KARAILRVTSGNFLEMFDFFLFGFY-----------------------------------ATAIAKTFFPAGNEF----A 53 (434)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHH-----------------------------------HHHHHHHhCCCCCch----H
Confidence 3456778889999999999999999 999999999987664 4
Q ss_pred hh-HHHH-----HHHHHHhhhhhhhccccCCCCchHHHHHHHHHHHHHHHHHhccccHH--------HHHHHHHHhhccc
Q 039541 121 LP-SSCF-----FIGCLLGGLALSTLGDSSSLGRKKLLFLSCFAMSITALATIFANNIW--------IYSTIRFVAGFFR 186 (521)
Q Consensus 121 ~~-~s~~-----~lg~~i~~~~~g~l~dr~~~Grr~~l~~~~~~~~~~~~~~~~~~~~~--------~l~~~r~l~G~~~ 186 (521)
.+ .+.. .++..+++++.|+++|| +|||++++.+.+++++++++++++++++ .++++|+++|++.
T Consensus 54 ~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr--~Grr~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~R~l~G~~~ 131 (434)
T PRK15075 54 SLMLTFAVFGAGFLMRPLGAIVLGAYIDR--VGRRKGLIVTLSIMASGTLLIAFVPGYATIGLAAPLLVLLGRLLQGFSA 131 (434)
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHHHHhhh--hchHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHhhccc
Confidence 33 2222 33335789999999999 9999999999999999999999999987 4689999999999
Q ss_pred hhhHhhhhhheeeeecCcchhHHHHHHHHHHHHHHHHHHHHHHhh---------cCCchhHHHHHHHHHHHHHHhhhcee
Q 039541 187 APIMTSVIVLLSEMVSKRWRGQVVIIGFTFFSFGLVSLPAVAYLS---------RGSSWKMLYVWTSIPSIVCCIIIYPF 257 (521)
Q Consensus 187 g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~i~~~i~~~~---------~~~~wr~~f~~~~~~~~~~~~~~~~~ 257 (521)
|...+....++.|++|+++|++++++...+..+|..+++.++..+ +.+|||++|++..+...+.. .....
T Consensus 132 g~~~~~~~~~~~e~~p~~~rg~~~~~~~~~~~~g~~~g~~~g~~l~~~~~~~~~~~~gWr~~f~~~~~~~~~~~-~~~~~ 210 (434)
T PRK15075 132 GVELGGVSVYLAEIATPGRKGFYTSWQSASQQVAVVFAALLGYLLNQWLSPAQMAEWGWRIPFLIGCLIVPFIF-LIRRS 210 (434)
T ss_pred cccHHHHHHHHHhhCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhccchHHHHHHHHHHHHHHH-HHHHh
Confidence 999999999999999999999999999988888888877774332 46899999997654433222 22223
Q ss_pred eecchhHHHhcCCHHHHHHHHHHHhhhcCCCCCCCccccccCCCCCccccCCCcccccccHHHHhccHHHHHHHHH-HHH
Q 039541 258 ISESPRWLFIHGHEAEAMAVLKRLASRSNYQSDYGLESCCLSNMPPKAKNVIPKLDLYSSLKDLFNRKWALRRLLT-IMA 336 (521)
Q Consensus 258 ~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~ 336 (521)
.||++++...+ + + . +.+..++...++++.+..... ...
T Consensus 211 ~~e~~~~~~~~--------------~-~-----------------------~---~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (434)
T PRK15075 211 LEETEEFLARK--------------H-R-----------------------P---SMREIFRSLAANWRIVLAGMLMVAM 249 (434)
T ss_pred cCCCHHHHHhh--------------h-c-----------------------c---ccccHHHHHHHhHHHHHHHHHHHHH
Confidence 33332110000 0 0 0 000123333444332222111 111
Q ss_pred HHHHHHHHHHhHHhhccC-CCccHHH---HHHHHHHHhHhHHHHHHHHHhhcCCchHHHHHHHHHHHHHH-HHH-hcCCc
Q 039541 337 LAFGIGVVYFGLLLGVGN-LSFNIYL---SLAFNGLLDIPAYLLTFILIERWSRKSSILTFCILSGTCSA-ICV-AIGDE 410 (521)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~-~~~~~~~---~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~i~~~-~~~-~~~~~ 410 (521)
.........+..|.++++ .+.+... ......++++++.++.|+++||+|||+.+..+..+..+... .+. .....
T Consensus 250 ~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (434)
T PRK15075 250 TTVSFYLITVYTPTFGKTVLHLSAADSLLVTLCVGVSNFIWLPIGGALSDRIGRRPVLIAFTVLAILTAYPALSWLVAAP 329 (434)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 222223333334555443 5655332 33445677788999999999999999987776554433221 111 11222
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhccccCchhhhhhhHHHHHhhhh-hhhHHHHHHHh
Q 039541 411 QEVLQIGLELASFFSACVAFNVLLVFGTELFTTCVRNSTTSLVRQAVNL-GAAFSPVLISA 470 (521)
Q Consensus 411 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~-g~~~~p~~~~~ 470 (521)
.........++.+++.+...+..+.+..|.+|++.|+++.++.+..... ++.++|.+.++
T Consensus 330 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~e~~p~~~rg~~~g~~~~~~~~~~g~~~p~~~g~ 390 (434)
T PRK15075 330 SFARMLAVELWLSFLYGSYNGAMVVALTEVMPAEVRTAGFSLAYSLATAIFGGFTPAISTW 390 (434)
T ss_pred chHHHHHHHHHHHHHHHHHHhhHHHHHHHHCCCCccchheeHHHHHHHHHHhhhHHHHHHH
Confidence 1122223334445566666666778899999999999999997665554 57788998876
No 37
>PRK10504 putative transporter; Provisional
Probab=100.00 E-value=6.6e-31 Score=264.71 Aligned_cols=381 Identities=12% Similarity=0.054 Sum_probs=273.2
Q ss_pred HHHHHHHHHHHHHHHHhhhhccccCCcccccCCcccccCCccccccccCcceecCCCCcceeeecceeeCCccccchhhH
Q 039541 44 QVILISLLLIFESQQTFISVYTDEEPTWHCINNTTTCSSSSDICTLSKSAWAWDRPSDTTIISDWSLECAGSSILSGLPS 123 (521)
Q Consensus 44 ~~~~~~l~~~~~~~~~~~~~~~~~~p~~~c~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 123 (521)
.+.+++++.++..++....... +|.+.+++|.+..+. +++.
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~-----------------------------------~p~~~~~~g~s~~~~----~~~~ 51 (471)
T PRK10504 11 QLWIVAFGFFMQSLDTTIVNTA-----------------------------------LPSMAQSLGESPLHM----HMVI 51 (471)
T ss_pred HHHHHHHHHHHHHHhHHHHHHH-----------------------------------HHHHHHHhCcCHHHH----HHHH
Confidence 3455667778888888877778 899999999999766 9999
Q ss_pred HHHHHHHHHhhhhhhhccccCCCCchHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHhhccchhhHhhhhhheeeeecC
Q 039541 124 SCFFIGCLLGGLALSTLGDSSSLGRKKLLFLSCFAMSITALATIFANNIWIYSTIRFVAGFFRAPIMTSVIVLLSEMVSK 203 (521)
Q Consensus 124 s~~~lg~~i~~~~~g~l~dr~~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~ 203 (521)
+.+.++..++.+++|+++|| +|||++++.+.++.+++.++++++++++.+++.|+++|++.+...+...+++.|++|+
T Consensus 52 ~~~~~~~~~~~~~~g~l~d~--~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~ 129 (471)
T PRK10504 52 VSYVLTVAVMLPASGWLADR--VGVRNIFFTAIVLFTLGSLFCALSGTLNELLLARVLQGVGGAMMVPVGRLTVMKIVPR 129 (471)
T ss_pred HHHHHHHHHHHHHHHHHHHH--hchHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCH
Confidence 99999999999999999999 9999999999999999999999999999999999999999999999999999999999
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHH-HHhhcCCchhHHHHHHHHHHHHHHhhhceeeecchhHHHhcCCHHHHHHHHH---
Q 039541 204 RWRGQVVIIGFTFFSFGLVSLPAV-AYLSRGSSWKMLYVWTSIPSIVCCIIIYPFISESPRWLFIHGHEAEAMAVLK--- 279 (521)
Q Consensus 204 ~~rg~~~~~~~~~~~~G~~i~~~i-~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~~~esp~~~~~~~~~~~~~~~~~--- 279 (521)
++|+++.++.....++|..++|.+ +.+.+..+||+.|++..+..++..++.....|+.+.. +.+.+.......
T Consensus 130 ~~~~~~~~~~~~~~~~g~~~g~~~~g~l~~~~gw~~~f~~~~~~~~l~~~~~~~~~~~~~~~---~~r~~~~~~~~~~~~ 206 (471)
T PRK10504 130 EQYMAAMTFVTLPGQVGPLLGPALGGLLVEYASWHWIFLINIPVGIIGAIATLMLMPNYTMQ---TRRFDLSGFLLLAVG 206 (471)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHhCCCcccc---CCCCChHHHHHHHHH
Confidence 999999999999999999999998 6777888999999998877776665555555554321 111111111000
Q ss_pred ----HHhhhcCCCCCCCcccc-ccC-----CC-CCccccCCCcccccccHHHHhccHHHHHHHHHHHHHHHHHHHHHHhH
Q 039541 280 ----RLASRSNYQSDYGLESC-CLS-----NM-PPKAKNVIPKLDLYSSLKDLFNRKWALRRLLTIMALAFGIGVVYFGL 348 (521)
Q Consensus 280 ----~~~~~~~~~~~~~~~~~-~~~-----~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 348 (521)
......+.......... ... .. ....+++ +..+...+. +++++|.++..+...++..+......+..
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~l~~~~~~~~~l~~~~~~~~~~~~~~~~~ 284 (471)
T PRK10504 207 MATLTLALDGSKGLGLSPLAIAGLVAVGVVALLLYLLHAR-NNNRALFSL-KLFRTRTFSLGLAGSFAGRIGSGMLPFMT 284 (471)
T ss_pred HHHHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHHHh-cCCCCccCH-HHhcccchHHHHHHHHHHHHHHHHHHHHH
Confidence 00000000000000000 000 00 0000000 000111133 47889887776666666666665556667
Q ss_pred HhhccC-CCccHHHHH---HHHHHHhHhHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHhcCCchH-HHHHHHHHHHH
Q 039541 349 LLGVGN-LSFNIYLSL---AFNGLLDIPAYLLTFILIERWSRKSSILTFCILSGTCSAICVAIGDEQE-VLQIGLELASF 423 (521)
Q Consensus 349 ~~~~~~-~~~~~~~~~---~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~i~~~~~~~~~~~~~-~~~~~~~~~~~ 423 (521)
|++++. .+.+..... ....++.+++.++.+++.||+|+|+++..+..+.++...++.+...... +......++.+
T Consensus 285 ~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 364 (471)
T PRK10504 285 PVFLQIGLGFSPFHAGLMMIPMVLGSMGMKRIVVQVVNRFGYRRVLVATTLGLALVSLLFMLVALLGWYYLLPFVLFLQG 364 (471)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHhccccccHHHHHHHHHHHH
Confidence 776653 565543333 3344556667788999999999999999888877777666655432222 22334455666
Q ss_pred HHHHHHHHHHHHhhccccCchhhhhhhHHHHHhhhhhhhHHHHHHHh
Q 039541 424 FSACVAFNVLLVFGTELFTTCVRNSTTSLVRQAVNLGAAFSPVLISA 470 (521)
Q Consensus 424 ~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~ 470 (521)
++.+..++....+..+.+|++.++.++++.++...+|..++|.+.+.
T Consensus 365 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~ 411 (471)
T PRK10504 365 MVNSTRFSSMNTLTLKDLPDNLASSGNSLLSMIMQLSMSIGVTIAGL 411 (471)
T ss_pred HHHHHHHHHHHHHHHHcCCHHhccchHHHHHHHHHHHHHHHHHHHHH
Confidence 77777888888999999999999999999999999999999988874
No 38
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=100.00 E-value=3.5e-38 Score=316.00 Aligned_cols=380 Identities=27% Similarity=0.414 Sum_probs=279.2
Q ss_pred ccchhhHHHHHHHHHHhhhhhhhccccCCCCchHHHHHHHHHHHHHHHHHhccc---cHHHHHHHHHHhhccchhhHhhh
Q 039541 117 ILSGLPSSCFFIGCLLGGLALSTLGDSSSLGRKKLLFLSCFAMSITALATIFAN---NIWIYSTIRFVAGFFRAPIMTSV 193 (521)
Q Consensus 117 ~~~~~~~s~~~lg~~i~~~~~g~l~dr~~~Grr~~l~~~~~~~~~~~~~~~~~~---~~~~l~~~r~l~G~~~g~~~~~~ 193 (521)
...+++.+...+|..+|++++|+++|| +|||++++++.++..+++++.++++ |++.+.++|+++|++.|+..+..
T Consensus 46 ~~~~~~~~~~~~g~~~G~~~~g~~~d~--~GRk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~R~~~G~~~g~~~~~~ 123 (451)
T PF00083_consen 46 LLSSLLTSSFFIGAIVGALIFGFLADR--YGRKPALIISALLMIIGSILIAFAPSYNNFWMLLIGRFLIGFGIGGAYVVS 123 (451)
T ss_pred HHHHHHHHHHHhhhccccccccccccc--ccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 345899999999999999999999999 9999999999999999999999999 99999999999999999999999
Q ss_pred hhheeeeecCcchhHHHHHHHHHHHHHHHHHHHHHHhhc----CCchhHHHHHHHHHHHHHHhhhceeeecchhHHHhcC
Q 039541 194 IVLLSEMVSKRWRGQVVIIGFTFFSFGLVSLPAVAYLSR----GSSWKMLYVWTSIPSIVCCIIIYPFISESPRWLFIHG 269 (521)
Q Consensus 194 ~~~i~~~~~~~~rg~~~~~~~~~~~~G~~i~~~i~~~~~----~~~wr~~f~~~~~~~~~~~~~~~~~~~esp~~~~~~~ 269 (521)
..++.|..|+++|++..++.+.++.+|.+++..++.... ..+||..+++.++++++.. +...++||||+|+..++
T Consensus 124 ~~~~~E~~~~~~R~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~Wr~~~~~~~~~~l~~~-~~~~~~pESP~wL~~~~ 202 (451)
T PF00083_consen 124 PIYISEIAPPKHRGFLSSLFQLFWALGILLASLIGYIVSYYSDNWGWRILLIFGAIPSLLVL-LLRFFLPESPRWLLSKG 202 (451)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc-ccccccccccceecccc
Confidence 999999999999999999999999999999888865432 2469999999999998877 67789999999999999
Q ss_pred CHHHHHHHHHHHhhhcCCCCCCCccccccCCCCCccccCCCcccccccHHHHhccHHHHHHHHHHHHHHHHH-----HHH
Q 039541 270 HEAEAMAVLKRLASRSNYQSDYGLESCCLSNMPPKAKNVIPKLDLYSSLKDLFNRKWALRRLLTIMALAFGI-----GVV 344 (521)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-----~~~ 344 (521)
|.+|+++.++++.+ .+.. +.+.++...+.++..+. +.+++++++++..++............ ...
T Consensus 203 ~~~~A~~~l~~~~~-~~~~------~~~~~~~~~~~~~~~~~---~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~g~~~~ 272 (451)
T PF00083_consen 203 RDEEAEKVLRKLRG-KEIE------DEEIEEIKAEKKESQES---KASWRDLFRNKKYRKRLLIALLLQFFQQFSGINFI 272 (451)
T ss_pred cccccccccccccc-cccc------ccccccccccccccccc---ceeeeeccccccccccccccccccccccccccccc
Confidence 99999888777522 2111 11111111111111110 135677777765434444433333322 233
Q ss_pred HHhHHhhccCCCccHH-HHHHHHHHHhHhHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHH--h-c-CCch---HHHHH
Q 039541 345 YFGLLLGVGNLSFNIY-LSLAFNGLLDIPAYLLTFILIERWSRKSSILTFCILSGTCSAICV--A-I-GDEQ---EVLQI 416 (521)
Q Consensus 345 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~i~~~~~~--~-~-~~~~---~~~~~ 416 (521)
.+..+...+..+.+.. ......++..+++.+++.++.||+|||++++.+..+++++.+.+. . . .... .....
T Consensus 273 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GRr~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 352 (451)
T PF00083_consen 273 FYYSPSIFENAGISNSFLATLILGLVNFLGTLLAIFLIDRFGRRKLLIIGLLLMAICSLILGIIFFLGVSSSSWWSILSI 352 (451)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 3445656666555444 344555567778888889999999999999999888888877664 1 1 1111 12222
Q ss_pred HHHHHHHHHHH-HHHHHHHHhhccccCchhhhhhhHHHHHhhhhhhhHHHHHHHhhc--cchhHHHHHHHHHHHHHh-Hh
Q 039541 417 GLELASFFSAC-VAFNVLLVFGTELFTTCVRNSTTSLVRQAVNLGAAFSPVLISAGR--QNEFLSFGVFGLVVFCFG-FF 492 (521)
Q Consensus 417 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~~~--~~~~~~~~~~~~~~~~~~-~~ 492 (521)
+...+..+..+ +..+..+.+..|.+|++.|+++.++....+.++++++|.+..... .+....+.++++++++.. +.
T Consensus 353 ~~~~l~~~~~~~g~~~~~~~~~~ElfPt~~R~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~i~~i~~ 432 (451)
T PF00083_consen 353 VFLALFFAFFSLGWGPLPWIYTAELFPTKVRSTGIGLSYAVGRIGGFIIPFLFPYLFNNLGGWGVFLIFAGVCLIAIIFV 432 (451)
T ss_pred eeeeeccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccchhhHHHHHHHHhhe
Confidence 33333333333 445677799999999999999999999999999999988876532 222455566665555554 44
Q ss_pred hhccccCCCCCCCcchH
Q 039541 493 VVFLPETIGVTLCDTLD 509 (521)
Q Consensus 493 ~~~~~~~~~~~~~~~~~ 509 (521)
++++|||++++++|.++
T Consensus 433 ~~~lpET~g~~l~ei~~ 449 (451)
T PF00083_consen 433 YFFLPETKGKTLEEIQE 449 (451)
T ss_pred eEEEeeCCCCCHHHHHh
Confidence 67889999999877654
No 39
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=100.00 E-value=1.6e-30 Score=256.80 Aligned_cols=351 Identities=12% Similarity=0.041 Sum_probs=261.6
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhhhccccCCcccccCCcccccCCccccccccCcceecCCCCcceeeecceeeCCcccc
Q 039541 39 LPQFIQVILISLLLIFESQQTFISVYTDEEPTWHCINNTTTCSSSSDICTLSKSAWAWDRPSDTTIISDWSLECAGSSIL 118 (521)
Q Consensus 39 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~p~~~c~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 118 (521)
+..++..+.+.+..+...+....+.+. +|.+.+++|.+.++.
T Consensus 9 ~~~~~~~~~~~l~~~~~~~~~~~~~~~-----------------------------------~~~~~~~~~~s~~~~--- 50 (406)
T PRK15402 9 RQALLFPLCLVLFEFATYIANDMIQPG-----------------------------------MLAVVEDFNAGAEWV--- 50 (406)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhhHhcc-----------------------------------hHHHHHHhCCCHHHH---
Confidence 445666666677777777777777777 889999999998666
Q ss_pred chhhHHHHHHHHHHhhhhhhhccccCCCCchHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHhhccchhhHhhhhhhee
Q 039541 119 SGLPSSCFFIGCLLGGLALSTLGDSSSLGRKKLLFLSCFAMSITALATIFANNIWIYSTIRFVAGFFRAPIMTSVIVLLS 198 (521)
Q Consensus 119 ~~~~~s~~~lg~~i~~~~~g~l~dr~~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~ 198 (521)
++..+.+.++..+++++.|+++|| +|||++++++.++.+++.++.+++++++.+++.|+++|++.+...+...+++.
T Consensus 51 -~~~~~~~~~~~~~~~~~~G~l~dr--~g~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~ 127 (406)
T PRK15402 51 -PTSMTAYLAGGMFLQWLLGPLSDR--IGRRPVMLAGVAFFILTCLAILLAQSIEQFTLLRFLQGIGLCFIGAVGYAAIQ 127 (406)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHHH--hCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhHhhhHHHHHHHHHH
Confidence 999999999999999999999999 99999999999999999999999999999999999999999988899999999
Q ss_pred eeecCcchhHHHHHHHHHHHHHHHHHHHH-HHhhcCCchhHHHHHHHHHHHHHHhhhceeeecchhHHHhcCCHHHHHHH
Q 039541 199 EMVSKRWRGQVVIIGFTFFSFGLVSLPAV-AYLSRGSSWKMLYVWTSIPSIVCCIIIYPFISESPRWLFIHGHEAEAMAV 277 (521)
Q Consensus 199 ~~~~~~~rg~~~~~~~~~~~~G~~i~~~i-~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~~~esp~~~~~~~~~~~~~~~ 277 (521)
|++|+++|++++++......+|..++|.+ +.+.+..+||+.|++.++..++..+..++..||+++.. ++..+
T Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~---- 200 (406)
T PRK15402 128 ESFEEADAIKITALMANVALLAPLLGPLVGAALIHVLPWRGMFVLFAALAALSFFGLWRAMPETAGRV---GEKLS---- 200 (406)
T ss_pred HHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHHHHhCCCCCccc---ccccc----
Confidence 99999999999999988888999999998 66667789999999988888777655555667764210 00000
Q ss_pred HHHHhhhcCCCCCCCccccccCCCCCccccCCCcccccccHHHHhccHHHHHHHHHHHHHHHHHHHHHHhHHhh-ccCCC
Q 039541 278 LKRLASRSNYQSDYGLESCCLSNMPPKAKNVIPKLDLYSSLKDLFNRKWALRRLLTIMALAFGIGVVYFGLLLG-VGNLS 356 (521)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 356 (521)
.++ ...+++.++++|.++...+...+............|.+ .+..+
T Consensus 201 ~~~---------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g 247 (406)
T PRK15402 201 LKE---------------------------------LGRDYKLVLKNRRFVAGALALGLVSLPLLAWIALSPVILISGEQ 247 (406)
T ss_pred HHH---------------------------------HHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhC
Confidence 000 01256678888876655444433333222222223433 33445
Q ss_pred ccHHHHH---HHHHHHhHhHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHhcC---CchHHHHHHHHHHHHHHHHHHH
Q 039541 357 FNIYLSL---AFNGLLDIPAYLLTFILIERWSRKSSILTFCILSGTCSAICVAIG---DEQEVLQIGLELASFFSACVAF 430 (521)
Q Consensus 357 ~~~~~~~---~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~i~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 430 (521)
.+..... ....++.+++.++.+++.||+++|+.+.++..+..++...+.... ....++..+..++.+++.+...
T Consensus 248 ~~~~~~g~~~~~~~~~~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~ 327 (406)
T PRK15402 248 LSSYEYGLLQVPVFGALIAGNLTLARLTSRRPLRSLIRMGLWPMVAGLLLAALATVISSHAYLWLTAGLSLYAFGIGLAN 327 (406)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHh
Confidence 5443322 334456778899999999999999998888877776666555432 2222445566677777777776
Q ss_pred HHHHHhhccccCchhhhhhhHHHHHhhhhhhhHHHHHHHhh
Q 039541 431 NVLLVFGTELFTTCVRNSTTSLVRQAVNLGAAFSPVLISAG 471 (521)
Q Consensus 431 ~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~~ 471 (521)
+......... +++.++++.++.+....+|..+++.+.+..
T Consensus 328 ~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~g~~~~~~l 367 (406)
T PRK15402 328 AGLYRLTLFS-SDVSKGTVSAAMGMLSMLIFTVGIELSKHA 367 (406)
T ss_pred hhHHHHHhhh-ccccccHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 6655555444 347889999999999999999999999863
No 40
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=100.00 E-value=1.5e-31 Score=266.52 Aligned_cols=390 Identities=15% Similarity=0.097 Sum_probs=265.9
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHhhhhccccCCcccccCCcccccCCccccccccCcceecCCCCcceeeecceeeCCccc
Q 039541 38 GLPQFIQVILISLLLIFESQQTFISVYTDEEPTWHCINNTTTCSSSSDICTLSKSAWAWDRPSDTTIISDWSLECAGSSI 117 (521)
Q Consensus 38 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~p~~~c~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 117 (521)
+.|+|.++..+.+.......+...++.. +|.+.+++|++.++.
T Consensus 14 ~~~~w~i~~~~~~~~~~~~~~~~~~~~~-----------------------------------~~~i~~~~g~s~~~~-- 56 (455)
T TIGR00892 14 GGWGWVVLGATFVSIGFSYAFPKAVTVF-----------------------------------FKELQQIFQATYSET-- 56 (455)
T ss_pred CCcchHHHHHHHHHHHHHHhhhcchhhh-----------------------------------HHHHHHHhCcchhHH--
Confidence 4567777777777666555555556667 889999999999777
Q ss_pred cchhhHHHHHHHHHHhhhhhhhccccCCCCchHHHHHHHHHHHHHHHHHhccccHHHHHH-HHHHhhccchhhHhhhhhh
Q 039541 118 LSGLPSSCFFIGCLLGGLALSTLGDSSSLGRKKLLFLSCFAMSITALATIFANNIWIYST-IRFVAGFFRAPIMTSVIVL 196 (521)
Q Consensus 118 ~~~~~~s~~~lg~~i~~~~~g~l~dr~~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~-~r~l~G~~~g~~~~~~~~~ 196 (521)
+++.+.+.++..++.++.|+++|| +|||++++.+.++.++++++++++++++.+++ .|++.|++.+...+...++
T Consensus 57 --~~~~s~~~~~~~~~~~~~G~l~dr--~g~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~G~~~~~~~~~~~~~ 132 (455)
T TIGR00892 57 --AWISSIMLAVLYAGGPISSILVNR--FGCRPVVIAGGLLASLGMILASFSSNVIELYLTAGFITGLGLAFNFQPSLTM 132 (455)
T ss_pred --HHHHHHHHHHHHHhhHHHHHHHHH--cCchHHHHhhHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcchhhhhHHHHH
Confidence 999999999999999999999999 99999999999999999999999999998875 5799999999877777788
Q ss_pred eeeeecCcchhHHHHHHHHHHHHHHHHHHHH-HHhhcCCchhHHHHHHHHHHHHHHhhhceeeecchhHHHhcCCHHHHH
Q 039541 197 LSEMVSKRWRGQVVIIGFTFFSFGLVSLPAV-AYLSRGSSWKMLYVWTSIPSIVCCIIIYPFISESPRWLFIHGHEAEAM 275 (521)
Q Consensus 197 i~~~~~~~~rg~~~~~~~~~~~~G~~i~~~i-~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~~~esp~~~~~~~~~~~~~ 275 (521)
+.++++ ++|+++.++.+.+..+|..++|.+ +.+.+.+|||+.|++.+++.++..+..++..++.+... +.+.++
T Consensus 133 ~~~~~~-~~r~~a~g~~~~~~~~g~~~~~~l~~~l~~~~gwr~~f~~~~~~~~~~~v~~~~~~~~~~~~~--~~~~~~-- 207 (455)
T TIGR00892 133 LGKYFY-RRRPLANGLAMAGSPVFLSTLAPLNQYLFESFGWRGSFLILGGLLLHCCVCGALMRPVGPSQR--VSKSKS-- 207 (455)
T ss_pred HHHHHH-hhHHHHHHHHHhcccHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhCCCCcccc--cccccc--
Confidence 889986 789999999999999999999888 67778889999999999887766534333333322100 000000
Q ss_pred HHHHHHhhhcCCCCCCCccccccCCCCCccccCCCcccccccHHHHhccHHHHHHHHHHHHHHHHHHHHHHhHHhhccCC
Q 039541 276 AVLKRLASRSNYQSDYGLESCCLSNMPPKAKNVIPKLDLYSSLKDLFNRKWALRRLLTIMALAFGIGVVYFGLLLGVGNL 355 (521)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (521)
. ....++... ++ .+.+...++.....+ .+++++|.++......++..++.......++.+.++.
T Consensus 208 -------~-~~~~~~~~~-----~~--~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~ 271 (455)
T TIGR00892 208 -------K-EGLPPDGST-----KK--LSKKSTAEKINRFLD-FSLFTHRGFLVYLSGNVIMFLGFFAPIIFLVPYAKDK 271 (455)
T ss_pred -------c-ccCCCCCcc-----cc--ccccchhhhhhhhcc-hHHhcCchHHHHHHHHHHHHHHccchHHHHHHHHHHc
Confidence 0 000000000 00 000000000000011 2477888776555544444444433333444445556
Q ss_pred CccHHHH---HHHHHHHhHhHHHHHHHHHhhc--CCchHHHHH--HHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHH
Q 039541 356 SFNIYLS---LAFNGLLDIPAYLLTFILIERW--SRKSSILTF--CILSGTCSAICVAIGDEQEVLQIGLELASFFSACV 428 (521)
Q Consensus 356 ~~~~~~~---~~~~~~~~~~~~~~~g~l~dr~--g~~~~~~~~--~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 428 (521)
+.+.... ..+.+++.++++++.+++.||. ++|+...++ ..+.+++.+......+ .+..++..++.+++.+.
T Consensus 272 g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~--~~~~~i~~~~~G~~~g~ 349 (455)
T TIGR00892 272 GVDEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSFALLFNGLTHLLCALAGD--YTGLVIYCIFFGLSFGS 349 (455)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCHHHHHHHHHHHHHHHHHHHHHHHhch--HHHHHHHHHHHHHHhch
Confidence 6554333 3445567778888899999974 333333332 2323333333333222 24556677778888888
Q ss_pred HHHHHHHhhccccCchhhhhhhHHHHHhhhhhhhHHHHHHHhhc--c-chhHHHHHHHHHHHHHhH
Q 039541 429 AFNVLLVFGTELFTTCVRNSTTSLVRQAVNLGAAFSPVLISAGR--Q-NEFLSFGVFGLVVFCFGF 491 (521)
Q Consensus 429 ~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~~~--~-~~~~~~~~~~~~~~~~~~ 491 (521)
..+....++.|.+|++.++++.|+.+....+|.+++|.+.|... . ++...|.+.+++.+++.+
T Consensus 350 ~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g~~~~~f~~~~~~~li~~~ 415 (455)
T TIGR00892 350 VGALLFEVLMDLVGAQRFSSAVGLVTIVECCAVLIGPPLAGRLVDATKNYKYIFYASGSIVVSAGL 415 (455)
T ss_pred HHHHHHHHHHHHhhHHHHhhHHhHHHHHHHHHHHccccceeeeehhcCCcchHHHHhhHHHHHHHH
Confidence 88888999999999999999999999999999999999998632 2 355667766666555544
No 41
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=100.00 E-value=7.5e-31 Score=265.77 Aligned_cols=382 Identities=13% Similarity=0.096 Sum_probs=281.2
Q ss_pred HHHHHHHHHHHHHHHHHhhhhccccCCcccccCCcccccCCccccccccCcceecCCCCcceeeecceeeCCccccchhh
Q 039541 43 IQVILISLLLIFESQQTFISVYTDEEPTWHCINNTTTCSSSSDICTLSKSAWAWDRPSDTTIISDWSLECAGSSILSGLP 122 (521)
Q Consensus 43 ~~~~~~~l~~~~~~~~~~~~~~~~~~p~~~c~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 122 (521)
+++..++++.++..++....... .|.+.+++|.+.++. +++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~-----------------------------------~p~~~~~~g~s~~~~----~~~ 42 (485)
T TIGR00711 2 LLTIVLMLGTFMAVLDSTIVNVA-----------------------------------IPTIAGDLGSSLSQV----QWV 42 (485)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHH-----------------------------------HHHHHHhcCCChhhh----hHH
Confidence 34566778888899999888888 999999999999777 999
Q ss_pred HHHHHHHHHHhhhhhhhccccCCCCchHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHhhccchhhHhhhhhheeeeec
Q 039541 123 SSCFFIGCLLGGLALSTLGDSSSLGRKKLLFLSCFAMSITALATIFANNIWIYSTIRFVAGFFRAPIMTSVIVLLSEMVS 202 (521)
Q Consensus 123 ~s~~~lg~~i~~~~~g~l~dr~~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~ 202 (521)
.+.+.++..++.++.|+++|| +|||++++++.++.+++.+++++++|++.++++|+++|++.+...+...+++.|++|
T Consensus 43 ~~~~~~~~~~~~~~~g~l~dr--~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~G~~~~~~~~~~~~~i~~~~~ 120 (485)
T TIGR00711 43 ITSYMLANAISIPLTGWLAKR--FGTRRLFLISTFAFTLGSLLCGVAPNLELMIIFRVIQGFGGGPLIPLSFSTLLNIYP 120 (485)
T ss_pred HHHHHHHHHHHHHhHHHHHHH--hCcHHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHhhhhhHHHHHHHHHHHHCC
Confidence 999999999999999999999 999999999999999999999999999999999999999999999999999999999
Q ss_pred CcchhHHHHHHHHHHHHHHHHHHHH-HHhhcCCchhHHHHHHHHHHHHHHhhhceeeecchhHHHhcCCHHHHHHHH---
Q 039541 203 KRWRGQVVIIGFTFFSFGLVSLPAV-AYLSRGSSWKMLYVWTSIPSIVCCIIIYPFISESPRWLFIHGHEAEAMAVL--- 278 (521)
Q Consensus 203 ~~~rg~~~~~~~~~~~~G~~i~~~i-~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~~~esp~~~~~~~~~~~~~~~~--- 278 (521)
+++|+++++++..+..+|..++|.+ +++.++.+||+.|++.+++.++..++.++.+||+++. .+++.+......
T Consensus 121 ~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~d~~g~~l~~~ 198 (485)
T TIGR00711 121 PEKRGRAMAIWGLTVLVAPALGPTLGGWIIENYHWRWIFLINVPIGIIVVVVAFFILPRDKPA--ASENFDFLGLLLLSV 198 (485)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhhccHhHhccCcCceehhhhhhHHHHHHHHHHHHHcCCcccc--ccCCCcHHHHHHHHH
Confidence 9999999999999999999999998 6777889999999998888777775666667765431 111111111000
Q ss_pred ----HHHhhhcCCCCCCCccccccCCCC---------CccccCCCcccccccHHHHhccHHHHHHHHHHHHHHHHHHHHH
Q 039541 279 ----KRLASRSNYQSDYGLESCCLSNMP---------PKAKNVIPKLDLYSSLKDLFNRKWALRRLLTIMALAFGIGVVY 345 (521)
Q Consensus 279 ----~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 345 (521)
..... ..+.........+..... ....+.. .++. ....++++++.++...+..+...+......
T Consensus 199 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (485)
T TIGR00711 199 GLGSLLYGL-SEGPERGWFDSNEILILSITGLVAIIAFVVWELT-DDNP-LVDLRLFKYRNFTIGCVYMSLLGLGLYGSF 275 (485)
T ss_pred HHHHHHHHH-hhCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHc-CCCC-ccCHHHHcCCChHHHHHHHHHHHHHHHHHH
Confidence 00000 001100000000000000 0000000 0000 112357788877766666666555555555
Q ss_pred HhHHhhccC-CCccHHHH---HHHHHHHhHhHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHh-c-CCchHHHHHHHH
Q 039541 346 FGLLLGVGN-LSFNIYLS---LAFNGLLDIPAYLLTFILIERWSRKSSILTFCILSGTCSAICVA-I-GDEQEVLQIGLE 419 (521)
Q Consensus 346 ~~~~~~~~~-~~~~~~~~---~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~i~~~~~~~-~-~~~~~~~~~~~~ 419 (521)
+..|.++++ .+.++... .....++.+++.++.|++.||++||+.+.++..+.+++...+.+ . +..+.+......
T Consensus 276 ~~~p~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (485)
T TIGR00711 276 YLLPLYLQQVLGYTALQAGLHILPVGLAPMLSSPIAGRMGDKIDPRKLVTIGLILYAVGFYWRAFTFTPDTPFLAIALPQ 355 (485)
T ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcHHHHHHHHHHHHHHHHHHhccCCCCCCHHHHHHHH
Confidence 556666544 45554333 34456778889999999999999999999888888887776652 2 222224455567
Q ss_pred HHHHHHHHHHHHHHHHhhccccCchhhhhhhHHHHHhhhhhhhHHHHHHHh
Q 039541 420 LASFFSACVAFNVLLVFGTELFTTCVRNSTTSLVRQAVNLGAAFSPVLISA 470 (521)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~ 470 (521)
++.+++.+..++.......+..|++.++++.|+.+....+|+.+++.+.+.
T Consensus 356 ~l~g~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~ 406 (485)
T TIGR00711 356 FIRGFGMGCFFMPLTTIALSGLPPHKIARGSSLSNFTRQLGGSIGTALITT 406 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCHHHHhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 778888888877777778888999999999999999999999999998875
No 42
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=100.00 E-value=2.7e-30 Score=253.71 Aligned_cols=339 Identities=17% Similarity=0.199 Sum_probs=250.4
Q ss_pred CcceeeecceeeCCccccchhhHHHHHHHHHHhhhhhhhccccCCCCchHHHHHHHHHHHHHHHHHhccccHHHHHHHHH
Q 039541 101 DTTIISDWSLECAGSSILSGLPSSCFFIGCLLGGLALSTLGDSSSLGRKKLLFLSCFAMSITALATIFANNIWIYSTIRF 180 (521)
Q Consensus 101 ~~~i~~~~~~~~~~~~~~~~~~~s~~~lg~~i~~~~~g~l~dr~~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~ 180 (521)
.|.+.+++|.++++. +++.+.+.++..+++++.|+++|| +|||+++..+.++.+++.++.+++++++.+++.|+
T Consensus 28 ~p~~~~~~g~s~~~~----g~~~~~~~~~~~~~~~~~g~l~d~--~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (385)
T TIGR00710 28 FPEIAADLSTPASIV----QMTLTLYLLGFAAGQLLWGPLSDR--YGRRPVLLLGLFIFALSSLGLALSNNIETLLVLRF 101 (385)
T ss_pred HHHHHHHhCCCHHHH----HHHHHHHHHHHHHHHHhhhhHHHh--cCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHH
Confidence 889999999999776 999999999999999999999999 99999999999999999999999999999999999
Q ss_pred HhhccchhhHhhhhhheeeeecCcchhHHHHHHHHHHHHHHHHHHHH-HHhhcCCchhHHHHHHHHHHHHHHhhhceeee
Q 039541 181 VAGFFRAPIMTSVIVLLSEMVSKRWRGQVVIIGFTFFSFGLVSLPAV-AYLSRGSSWKMLYVWTSIPSIVCCIIIYPFIS 259 (521)
Q Consensus 181 l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~i~~~i-~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~~~ 259 (521)
+.|++.+...+...+++.|++|+++|++++++.+....+|..+++.+ +.+.+..+||+.|++.++..++..++.++..|
T Consensus 102 l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (385)
T TIGR00710 102 VQAFGASAGSVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYILVWLSWHAIFAFLSLAGILLSALIFFILP 181 (385)
T ss_pred HHHcchhHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 99999999999999999999999999999999999999999999988 66777789999999988887777656666667
Q ss_pred cchhHHHhcCCHHHHHHHHHHHhhhcCCCCCCCccccccCCCCCccccCCCcccccccHHHHhccHHHHHHHHHHHHHHH
Q 039541 260 ESPRWLFIHGHEAEAMAVLKRLASRSNYQSDYGLESCCLSNMPPKAKNVIPKLDLYSSLKDLFNRKWALRRLLTIMALAF 339 (521)
Q Consensus 260 esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 339 (521)
|+++.. .+ ++. .+....++++++++.++...+.......
T Consensus 182 ~~~~~~---~~-~~~-------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (385)
T TIGR00710 182 ETLPYE---AR-IQI-------------------------------------STYFETFLLLLKSKMFWGYALIYGASFG 220 (385)
T ss_pred CCCCCc---cc-CCH-------------------------------------HHHHHHHHHHHcCchhHHHHHHHHHHHH
Confidence 654210 00 000 0001245667788876655544444333
Q ss_pred HHHHHHHhHHhhcc-CCCccHHH---HHHHHHHHhHhHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHhcC--C-chH
Q 039541 340 GIGVVYFGLLLGVG-NLSFNIYL---SLAFNGLLDIPAYLLTFILIERWSRKSSILTFCILSGTCSAICVAIG--D-EQE 412 (521)
Q Consensus 340 ~~~~~~~~~~~~~~-~~~~~~~~---~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~i~~~~~~~~~--~-~~~ 412 (521)
.........|.+.. +.+.+... ......++.+++.++.+++.||+++|+.+..+..+..++.+++.... . ...
T Consensus 221 ~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (385)
T TIGR00710 221 GFFAFFSGAPFVYIDIMGVSPSVFGLLFALNIIAMIFGGFLNGRFIKKWGAKSLLRMGLILFAVSAVLLEITAILGLGSW 300 (385)
T ss_pred HHHHHHHcChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHhccchH
Confidence 33333333344433 45554433 33445677888999999999999999988888777766655554432 1 111
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccccCchhhhhhhHHHHHhhhhhhhHHHHHHHhhccchhHHHHHHHHHHH
Q 039541 413 VLQIGLELASFFSACVAFNVLLVFGTELFTTCVRNSTTSLVRQAVNLGAAFSPVLISAGRQNEFLSFGVFGLVVF 487 (521)
Q Consensus 413 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~~~~~~~~~~~~~~~~~~ 487 (521)
.......++.+++.+...+.......|..| +.++++.++.+.....++.+.+.+.+....+....+...+....
T Consensus 301 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~~~~ 374 (385)
T TIGR00710 301 AMIIGPMMFVGIGNSMISSIAMAYALEDFP-HVAGTASALFGTLRLVLGAIVGYLVSLIHGNTAWPMSLSCLVLA 374 (385)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccCc-ccchHHHHHHHHHHHHHHHHHHHHHHhccccChHHHHHHHHHHH
Confidence 333445666777788888888888888887 46799999998887665554444455433333444444443333
No 43
>PRK10091 MFS transport protein AraJ; Provisional
Probab=100.00 E-value=4.3e-30 Score=251.17 Aligned_cols=338 Identities=12% Similarity=0.064 Sum_probs=242.8
Q ss_pred CcceeeecceeeCCccccchhhHHHHHHHHHHhhhhhhhccccCCCCchHHHHHHHHHHHHHHHHHhccccHHHHHHHHH
Q 039541 101 DTTIISDWSLECAGSSILSGLPSSCFFIGCLLGGLALSTLGDSSSLGRKKLLFLSCFAMSITALATIFANNIWIYSTIRF 180 (521)
Q Consensus 101 ~~~i~~~~~~~~~~~~~~~~~~~s~~~lg~~i~~~~~g~l~dr~~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~ 180 (521)
+|.+++|+|.+.++. |++.+.+.++..++++++|+++|| +|||+++.++.++.+++.+++++++|++.+++.|+
T Consensus 26 l~~~~~~~g~s~~~~----g~~~s~~~~~~~~~~~~~g~l~dr--~g~r~~~~~~~~~~~~~~~l~~~~~~~~~l~~~r~ 99 (382)
T PRK10091 26 LTELAHDVGISIPAA----GHMISYYALGVVVGAPIIALFSSR--YSLKHILLFLVALCVIGNAMFTLSSSYLMLAIGRL 99 (382)
T ss_pred hHHHHHHcCCCHHHH----hHHHHHHHHHHHHHHHHHHHHHcc--CccHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHH
Confidence 899999999999777 999999999999999999999999 99999999999999999999999999999999999
Q ss_pred HhhccchhhHhhhhhheeeeecCcchhHHHHHHHHHHHHHHHHHHHH-HHhhcCCchhHHHHHHHHHHHHHHhhhceeee
Q 039541 181 VAGFFRAPIMTSVIVLLSEMVSKRWRGQVVIIGFTFFSFGLVSLPAV-AYLSRGSSWKMLYVWTSIPSIVCCIIIYPFIS 259 (521)
Q Consensus 181 l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~i~~~i-~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~~~ 259 (521)
++|++.+...+....++.|++|+++|++++++...+..+|..++|.+ +.+.+..+||+.|++.+++.++..+..++.+|
T Consensus 100 l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~lp 179 (382)
T PRK10091 100 VSGFPHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLSQEFSWRYTFLLIAVFNIAVLASIYFWVP 179 (382)
T ss_pred HHHhhhHHHHHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 99999999888888999999999999999999999999999999888 56667789999999998887776655556677
Q ss_pred cchhHHHhcCCHHHHHHHHHHHhhhcCCCCCCCccccccCCCCCccccCCCcccccccHHHHhccHHHHHHHHHHHHHHH
Q 039541 260 ESPRWLFIHGHEAEAMAVLKRLASRSNYQSDYGLESCCLSNMPPKAKNVIPKLDLYSSLKDLFNRKWALRRLLTIMALAF 339 (521)
Q Consensus 260 esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 339 (521)
|.++. .+. +. ....+.++++..+...........
T Consensus 180 ~~~~~----~~~-~~-----------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~ 213 (382)
T PRK10091 180 DIRDE----AKG-GL-----------------------------------------REQFHFLRSPAPWLIFAATMFGNA 213 (382)
T ss_pred CCCcc----ccc-CH-----------------------------------------HHHHHHhcChHHHHHHHHHHHHHH
Confidence 75310 000 00 011234455554433332222222
Q ss_pred HH-HHHHHhHHhhccCCCccHHHH---HHHHHHHhHhHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHhcCCchHHHH
Q 039541 340 GI-GVVYFGLLLGVGNLSFNIYLS---LAFNGLLDIPAYLLTFILIERWSRKSSILTFCILSGTCSAICVAIGDEQEVLQ 415 (521)
Q Consensus 340 ~~-~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 415 (521)
.. ....|..+++.+..+.+.... ....+++.+++.++.+++.||+++|+.+..+..+.+++.+++....+.. +..
T Consensus 214 ~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~~r~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~~ 292 (382)
T PRK10091 214 GVFAWFSYIKPYMMFISGFSETSMTFIMMLVGLGMVLGNLLSGRLSGRYSPLRIAAVTDFIIVLALLMLFFFGGMK-TAS 292 (382)
T ss_pred HHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHhHHHheeccccCchhHHHHHHHHHHHHHHHHHHHHhhH-HHH
Confidence 22 222334455544456554333 3456677889999999999999999998888887777765554433222 233
Q ss_pred HHHHHHHHHHHHHHHH-HHHHhhccccCchhhhhhhHHHHHhhhhhhhHHHHHHHh--h-ccchhHHHHHHHHHHHHHhH
Q 039541 416 IGLELASFFSACVAFN-VLLVFGTELFTTCVRNSTTSLVRQAVNLGAAFSPVLISA--G-RQNEFLSFGVFGLVVFCFGF 491 (521)
Q Consensus 416 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~--~-~~~~~~~~~~~~~~~~~~~~ 491 (521)
.+..++.+++.....+ .......+..+++.++.+. .+....+|..++|.+.|+ . ..++...+.+.+++.++...
T Consensus 293 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~g~~~Gp~~~G~l~~~~~~~~~~~~~~~~~~~~~~~ 370 (382)
T PRK10091 293 LIFAFICCAGLFALSAPLQILLLQNAKGGELLGAAG--GQIAFNLGSAIGAYCGGMMLTLGLAYNYVALPAALLSFAAMS 370 (382)
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHhCCcchHHHHHH--HHHHHHHHHHHHHHHhHHHHHcccCcchHHHHHHHHHHHHHH
Confidence 3344444444443333 3333444555555555543 456778999999999986 2 23566777766666655554
Q ss_pred hh
Q 039541 492 FV 493 (521)
Q Consensus 492 ~~ 493 (521)
..
T Consensus 371 ~~ 372 (382)
T PRK10091 371 SL 372 (382)
T ss_pred HH
Confidence 43
No 44
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.98 E-value=1.3e-30 Score=258.24 Aligned_cols=360 Identities=13% Similarity=0.000 Sum_probs=260.7
Q ss_pred CcceeeecceeeCCccccchhhHHHHHHHHHHhhhhhhhccccCCCCchHHHHHHHHHHHHHHHHHhc-----cccHHHH
Q 039541 101 DTTIISDWSLECAGSSILSGLPSSCFFIGCLLGGLALSTLGDSSSLGRKKLLFLSCFAMSITALATIF-----ANNIWIY 175 (521)
Q Consensus 101 ~~~i~~~~~~~~~~~~~~~~~~~s~~~lg~~i~~~~~g~l~dr~~~Grr~~l~~~~~~~~~~~~~~~~-----~~~~~~l 175 (521)
+|.+.++++.+..+. |++.+.+.++..+++++.|+++|| +|||+++..+.++.+++.+..+. .++++.+
T Consensus 40 ~~~~~~~~~~s~~~~----g~~~~~~~l~~~~~~~~~G~l~dr--~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l 113 (417)
T PRK10489 40 VPVQIQMMTGSTLQV----GLSVTLTGGAMFIGLMVGGVLADR--YDRKKLILLARGTCGLGFIGLALNAFLPEPSLLAI 113 (417)
T ss_pred HHHHHHHHHCCHHHH----HHHHHHHHHHHHHHHHhhHHHhhh--cCCceEEEehHHHHHHHHHHHHHHHHcCCCcHHHH
Confidence 567777888777555 999999999999999999999999 99999999988887777665442 5788999
Q ss_pred HHHHHHhhccchhhHhhhhhheeeeecCcchhHHHHHHHHHHHHHHHHHHHH-HHhhcCCchhHHHHHHHHHHHHHHhhh
Q 039541 176 STIRFVAGFFRAPIMTSVIVLLSEMVSKRWRGQVVIIGFTFFSFGLVSLPAV-AYLSRGSSWKMLYVWTSIPSIVCCIII 254 (521)
Q Consensus 176 ~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~i~~~i-~~~~~~~~wr~~f~~~~~~~~~~~~~~ 254 (521)
++.|+++|++.+...+...+++.|+.|+++|+++.++......+|..+||.+ +.+.+..+|++.|++.++..++.. +.
T Consensus 114 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~g~l~~~~~~~~~~~~~~~~~~~~~-~~ 192 (417)
T PRK10489 114 YLLGLWDGFFGSLGVTALLAATPALVGRENLMQAGAITMLTVRLGSVISPALGGLLIAAGGVAWNYGLAAAGTFITL-LP 192 (417)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhhhccCHHHHHHHHHHHHHHHhHHHHhHHHHHHHHHHHHhhHHHHHHHHHHHHHHH-HH
Confidence 9999999999998889999999999999999999999999999999999998 566666799999998887776665 45
Q ss_pred ceeeecchhHHHhcCCHHHHHHHHHHHhhhcCCCCCCCccccccCCCCCccccCCCcccccccHHHHhccHHHHHHHHHH
Q 039541 255 YPFISESPRWLFIHGHEAEAMAVLKRLASRSNYQSDYGLESCCLSNMPPKAKNVIPKLDLYSSLKDLFNRKWALRRLLTI 334 (521)
Q Consensus 255 ~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 334 (521)
.+.+|++++.. +++ ++. ..+..+.++.++++|.++...+..
T Consensus 193 ~~~l~~~~~~~--~~~-~~~------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~ 233 (417)
T PRK10489 193 LLRLPALPPPP--QPR-EHP------------------------------------LRSLLAGFRFLLASPVVGGIALLG 233 (417)
T ss_pred HHhCCCCCCCC--ccc-ccc------------------------------------hHHHHHHHHHHHcChHHHHHHHHH
Confidence 55667654210 000 000 000012455677887765544443
Q ss_pred HHHHHHHHHHHHhHHhhccC-CCccHHHH---HHHHHHHhHhHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHhcCCc
Q 039541 335 MALAFGIGVVYFGLLLGVGN-LSFNIYLS---LAFNGLLDIPAYLLTFILIERWSRKSSILTFCILSGTCSAICVAIGDE 410 (521)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~---~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~i~~~~~~~~~~~ 410 (521)
...... .......|.+.++ .+.+.... ....+++.+++.++.+++.||.++++.+..+..+.+++.+++...++.
T Consensus 234 ~~~~~~-~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 312 (417)
T PRK10489 234 GLLTMA-SAVRVLYPALADEVWQMGAAQIGLLYAAVPLGAALGALTSGWLAHSARPGLLMLLSTLGSFLAVGLFGLMPMW 312 (417)
T ss_pred HHHHHH-HhHHHhhHHHHHhccCCChhHhHHHHHHHHHHHHHHHHHHHHhhhccCcchHHHHHHHHHHHHHHHHHccchH
Confidence 332222 2222234555554 55554333 344557788899999999999877778887777777776665543322
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhccccCchhhhhhhHHHHHhhhhhhhHHHHHHHhhc--cchhHHHHHHHHHHHH
Q 039541 411 QEVLQIGLELASFFSACVAFNVLLVFGTELFTTCVRNSTTSLVRQAVNLGAAFSPVLISAGR--QNEFLSFGVFGLVVFC 488 (521)
Q Consensus 411 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~~~--~~~~~~~~~~~~~~~~ 488 (521)
+...+..++.+++.+...+...++..|..|++.||+++|+.+....+|..++|.+.|... .+....+.+.+++.++
T Consensus 313 --~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~l~G~l~~~~g~~~~~~~~~~~~~~ 390 (417)
T PRK10489 313 --ILAVLCLALFGYLSAISSLLQYTLLQTQTPDEMLGRINGLWTAQNVTGDAIGAALLGGLGAMMTPVASASASGFGLLI 390 (417)
T ss_pred --HHHHHHHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHhchhhHHHHHHHHHHH
Confidence 345556667777777767778889999999999999999999999999999999998732 3455556555554444
Q ss_pred -HhHhhhccccCCCCCCCcchH
Q 039541 489 -FGFFVVFLPETIGVTLCDTLD 509 (521)
Q Consensus 489 -~~~~~~~~~~~~~~~~~~~~~ 509 (521)
+.+....+++.|+++.+|..+
T Consensus 391 ~~~~~~~~~~~~~~~~~~~~~~ 412 (417)
T PRK10489 391 IGVLLLLVLGELRRFRQTPPEV 412 (417)
T ss_pred HHHHHHHhcccccccccccccC
Confidence 444556678877776655543
No 45
>PRK12382 putative transporter; Provisional
Probab=99.98 E-value=1e-29 Score=249.92 Aligned_cols=336 Identities=13% Similarity=0.054 Sum_probs=239.7
Q ss_pred Ccc-eeeecceeeCCccccchhhHHHHHHHHHHhhhhhhhccccCCCCchHHHHHHHHHHHHHHHHH---hc-----ccc
Q 039541 101 DTT-IISDWSLECAGSSILSGLPSSCFFIGCLLGGLALSTLGDSSSLGRKKLLFLSCFAMSITALAT---IF-----ANN 171 (521)
Q Consensus 101 ~~~-i~~~~~~~~~~~~~~~~~~~s~~~lg~~i~~~~~g~l~dr~~~Grr~~l~~~~~~~~~~~~~~---~~-----~~~ 171 (521)
+|. +.+++|++.++. |++.+++.++..++++++|+++|| +|||++++.+.+...++.+.. ++ .++
T Consensus 38 l~~~l~~~lg~s~~~~----g~~~s~~~~~~~i~~~~~G~l~Dr--~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 111 (392)
T PRK12382 38 IPLFVHHDLGFGNTMV----GIAVGIQFLATVLTRGYAGRLADQ--YGAKRSALQGMLACGLAGLAYLLAAILPVSAPFK 111 (392)
T ss_pred hhHHHHHhcCCcHHHH----HHHHHHHHHHHHHHhhhhhHHHHh--hcchHHHHHHHHHHHHHHHHHHhhhccccchhHH
Confidence 554 678999999666 999999999999999999999999 999999999988877665432 22 358
Q ss_pred HHHHHHHHHHhhccchhhHhhhhhheeeeecCcchhHHHHHHHHHHHHHHHHHHHH-HHhhcCCchhHHHHHHHHHHHHH
Q 039541 172 IWIYSTIRFVAGFFRAPIMTSVIVLLSEMVSKRWRGQVVIIGFTFFSFGLVSLPAV-AYLSRGSSWKMLYVWTSIPSIVC 250 (521)
Q Consensus 172 ~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~i~~~i-~~~~~~~~wr~~f~~~~~~~~~~ 250 (521)
++.++++|+++|++.+...+...+++.|++|+++|++++++.+.+...|.+++|.+ +.+.+..|||+.+.+..+..++.
T Consensus 112 ~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~ 191 (392)
T PRK12382 112 FALLVVGRLILGFGESQLLTGALTWGLGLVGPKHSGKVMSWNGMAMYGALAAGAPLGLLLHSHFGFAALALTTMVLPLLA 191 (392)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCccccchhhhHHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHHH
Confidence 89999999999999999999999999999999999999999999999999999999 56667789999877665554433
Q ss_pred HhhhceeeecchhHHHhcCCHHHHHHHHHHHhhhcCCCCCCCccccccCCCCCccccCCCcccccccHHHHhccHHHHHH
Q 039541 251 CIIIYPFISESPRWLFIHGHEAEAMAVLKRLASRSNYQSDYGLESCCLSNMPPKAKNVIPKLDLYSSLKDLFNRKWALRR 330 (521)
Q Consensus 251 ~~~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 330 (521)
. ......||.+. + ++ ++ .+.++.++. .+..
T Consensus 192 ~-~~~~~~~~~~~------~-~~----------------------------------~~------~~~~~~~~~--~~~~ 221 (392)
T PRK12382 192 W-AFNGTVRKVPA------H-AG----------------------------------ER------PSLWSVVGL--IWKP 221 (392)
T ss_pred H-HHHHhccCCCC------C-cc----------------------------------cC------chHHHHHHH--HHHh
Confidence 3 22222222210 0 00 00 011222211 1111
Q ss_pred HHHHHHHHHHHHHHHHhHHhhccCCCccH-HHHHHHHHHHhHhHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHhcCC
Q 039541 331 LLTIMALAFGIGVVYFGLLLGVGNLSFNI-YLSLAFNGLLDIPAYLLTFILIERWSRKSSILTFCILSGTCSAICVAIGD 409 (521)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~i~~~~~~~~~~ 409 (521)
.+................+.++++.+.+. .......+++.+++.++.+++.||+++|+.+..+..+.+++.+++...++
T Consensus 222 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~ 301 (392)
T PRK12382 222 GLGLALQGVGFAVIGTFVSLYFASKGWAMAGFTLTAFGGAFVLMRVLFGWMPDRFGGVKVAIVSLLVETVGLLLLWLAPT 301 (392)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCCeehHHHHHHHHHHHHHHHHccc
Confidence 11111122222222222333334444332 23334455667788999999999999999988888888887766655443
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHhhccccCchhhhhhhHHHHHhhhhhhhHHHHHHHh--hccchhHHHHHHHHHHH
Q 039541 410 EQEVLQIGLELASFFSACVAFNVLLVFGTELFTTCVRNSTTSLVRQAVNLGAAFSPVLISA--GRQNEFLSFGVFGLVVF 487 (521)
Q Consensus 410 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~--~~~~~~~~~~~~~~~~~ 487 (521)
. +...+..++.+++.+...+.......|.+|++.|+++.|+.+....+|..++|.+.+. ...++...+.+.+++.+
T Consensus 302 ~--~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~~~~~~~~~~~~~ 379 (392)
T PRK12382 302 A--WVALAGAALTGAGCSLIFPALGVEVVKRVPSQVRGTALGGYAAFQDIAYGVSGPLAGMLATSFGYPSVFLAGAISAV 379 (392)
T ss_pred H--HHHHHHHHHHHHHHHhHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHH
Confidence 2 4455566777777777778888888899999999999999999999999999999986 33467777888777777
Q ss_pred HHhHhhh
Q 039541 488 CFGFFVV 494 (521)
Q Consensus 488 ~~~~~~~ 494 (521)
++.+..+
T Consensus 380 ~~~~~~~ 386 (392)
T PRK12382 380 LGIIVTI 386 (392)
T ss_pred HHHHHHH
Confidence 7666544
No 46
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.98 E-value=2.8e-30 Score=251.71 Aligned_cols=327 Identities=13% Similarity=0.016 Sum_probs=253.0
Q ss_pred CcceeeecceeeCCccccchhhHHHHHHHHHHhhhhhhhccccCCCCchHHHHHHHHHHHHHHHHHhccc-----cHHHH
Q 039541 101 DTTIISDWSLECAGSSILSGLPSSCFFIGCLLGGLALSTLGDSSSLGRKKLLFLSCFAMSITALATIFAN-----NIWIY 175 (521)
Q Consensus 101 ~~~i~~~~~~~~~~~~~~~~~~~s~~~lg~~i~~~~~g~l~dr~~~Grr~~l~~~~~~~~~~~~~~~~~~-----~~~~l 175 (521)
+|.+..+++.+..+. +++.+++.++..++++++|+++|| +|||++++.+.++.+++.++.++++ +++.+
T Consensus 22 ~~~~~~~~~~s~~~~----g~~~~~~~~~~~i~~~~~G~l~dr--~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (365)
T TIGR00900 22 LPLYVLAGTGSASVL----SLAALAGMLPYVVLSPIAGALADR--YDRKKVMIGADLIRAVLVAVLPFVALLGGLNIWQV 95 (365)
T ss_pred HHHHHHHhhccHHHH----HHHHHHHHHHHHHHHHhhhHHHHh--hchhHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHH
Confidence 677778888888665 999999999999999999999999 9999999999999999999888887 99999
Q ss_pred HHHHHHhhccchhhHhhhhhheeeeecCcchhHHHHHHHHHHHHHHHHHHHH-HHhhcCCchhHHHHHHHHHHHHHHhhh
Q 039541 176 STIRFVAGFFRAPIMTSVIVLLSEMVSKRWRGQVVIIGFTFFSFGLVSLPAV-AYLSRGSSWKMLYVWTSIPSIVCCIII 254 (521)
Q Consensus 176 ~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~i~~~i-~~~~~~~~wr~~f~~~~~~~~~~~~~~ 254 (521)
++.|++.|++.+...+...+++.|++|+++|++++++.+.+..+|.+++|.+ +.+.+..+||+.|++.++..++..++.
T Consensus 96 ~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~ 175 (365)
T TIGR00900 96 YVLAGILAIAQAFFTPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLMYATLGIKWAIWVDAVGFAISALLI 175 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999998 666677899999998887666655333
Q ss_pred cee-eecchhHHHhcCCHHHHHHHHHHHhhhcCCCCCCCccccccCCCCCccccCCCcccccccHHHHhccHHHHHHHHH
Q 039541 255 YPF-ISESPRWLFIHGHEAEAMAVLKRLASRSNYQSDYGLESCCLSNMPPKAKNVIPKLDLYSSLKDLFNRKWALRRLLT 333 (521)
Q Consensus 255 ~~~-~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 333 (521)
+.. .||+++. ++.+..++..+ +..+.++.++++|.++...+.
T Consensus 176 ~~~~~~~~~~~----~~~~~~~~~~~---------------------------------~~~~~~~~~~~~~~~~~~~~~ 218 (365)
T TIGR00900 176 VSVRIPELAAS----EIQALSNAVLR---------------------------------DTREGIKFVLKNPLLRTLLLL 218 (365)
T ss_pred HhcccccCCCc----cccccchhHHH---------------------------------HHHhHHHHHHcCcHHHHHHHH
Confidence 222 2332110 00000000000 011256677888887666555
Q ss_pred HHHHHHHHHHHH-HhHHhhccC-CCccHH---HHHHHHHHHhHhHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHhcC
Q 039541 334 IMALAFGIGVVY-FGLLLGVGN-LSFNIY---LSLAFNGLLDIPAYLLTFILIERWSRKSSILTFCILSGTCSAICVAIG 408 (521)
Q Consensus 334 ~~~~~~~~~~~~-~~~~~~~~~-~~~~~~---~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~i~~~~~~~~~ 408 (521)
............ ...|++.++ .+.+.. ......+++.+++.++.+++.||++||+.+..+..+.+++...+.+..
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (365)
T TIGR00900 219 ALLFNLVFAPAIVALFPYVQSKYLGRGSTHYGWVLAAFGLGALLGALLLGLLGRYFKRMALMTGAIFVIGLAILVVGLTP 298 (365)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHhhc
Confidence 555544443333 445665554 444432 333455677788999999999999999988888777777776666654
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHhhccccCchhhhhhhHHHHHhhhhhhhHHHHHHHhh
Q 039541 409 DEQEVLQIGLELASFFSACVAFNVLLVFGTELFTTCVRNSTTSLVRQAVNLGAAFSPVLISAG 471 (521)
Q Consensus 409 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~~ 471 (521)
. +.+...+..++.+++.+...+...++..|.+|++.|+++.|+.+....++..++|.+.|..
T Consensus 299 ~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~g~l 360 (365)
T TIGR00900 299 P-NFPLFLVLWFAIGVGYGPINVPQGTLLQRRVPAELLGRVFGAQFSLSHAAWPLGLILAGPL 360 (365)
T ss_pred h-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3 2355667778888888888899999999999999999999999999999999999998864
No 47
>PRK03699 putative transporter; Provisional
Probab=99.98 E-value=5.1e-30 Score=251.72 Aligned_cols=368 Identities=12% Similarity=0.111 Sum_probs=265.4
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhccccCCcccccCCcccccCCccccccccCcceecCCCCcceeeecceeeCCccccch
Q 039541 41 QFIQVILISLLLIFESQQTFISVYTDEEPTWHCINNTTTCSSSSDICTLSKSAWAWDRPSDTTIISDWSLECAGSSILSG 120 (521)
Q Consensus 41 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~p~~~c~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 120 (521)
+++....+++..++.+.+....+.. +|++.+++|++.++. +
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~g~~-----------------------------------~~~i~~~~~~s~~~~----g 45 (394)
T PRK03699 5 RIKLTWISFLSYALTGALVIVTGMV-----------------------------------MGPIAEYFNLPVSSM----S 45 (394)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhhh-----------------------------------hHHHHHHhCCCHHHH----H
Confidence 3456667777888888888888888 999999999999776 9
Q ss_pred hhHHHHHHHHHHhhhhhhhccccCCCCchHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHhhccchhhHhhhhhheeee
Q 039541 121 LPSSCFFIGCLLGGLALSTLGDSSSLGRKKLLFLSCFAMSITALATIFANNIWIYSTIRFVAGFFRAPIMTSVIVLLSEM 200 (521)
Q Consensus 121 ~~~s~~~lg~~i~~~~~g~l~dr~~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~ 200 (521)
++.+.+.+++.+++++.|++.|| +|||+++..+.++.+++.++++++++++.+++.|+++|++.|...+...+++.|+
T Consensus 46 ~~~s~~~~~~~i~~~~~g~l~dr--~g~r~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~i~~~ 123 (394)
T PRK03699 46 NTFTFLNAGILISIFLNAWLMEI--IPLKRQLIFGFALMILAVAGLMFSHSLALFSIAMFVLGVVSGITMSIGTFLITHV 123 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH--hhHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHhhHhhccchhHHhhhh
Confidence 99999999999999999999999 9999999999999999999999999999999999999999999999999999999
Q ss_pred ecCcchhHHHHHHHHHHHHHHHHHHHH-HHhh-cCCchhHHHHHHHHHHHHHHhhhceeeecchhHHHhcCCHHHHHHHH
Q 039541 201 VSKRWRGQVVIIGFTFFSFGLVSLPAV-AYLS-RGSSWKMLYVWTSIPSIVCCIIIYPFISESPRWLFIHGHEAEAMAVL 278 (521)
Q Consensus 201 ~~~~~rg~~~~~~~~~~~~G~~i~~~i-~~~~-~~~~wr~~f~~~~~~~~~~~~~~~~~~~esp~~~~~~~~~~~~~~~~ 278 (521)
+|+++|+++++..+....+|..++|.+ +.+. ...+||+.|.+.+++.++..++.+ + ++.|+. ++
T Consensus 124 ~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~gw~~~f~~~~~~~~~~~~~~~-~-~~~p~~-------~~----- 189 (394)
T PRK03699 124 YEGKQRGSRLLFTDSFFSMAGMIFPIIAAYLLARSIEWYWVYACIGLVYVAIFILTL-F-SEFPAL-------GK----- 189 (394)
T ss_pred cccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHH-h-cCCccc-------cc-----
Confidence 999999999999988899998888887 5554 457999999988887776653332 2 222210 00
Q ss_pred HHHhhhcCCCCCCCccccccCCCCCccccCCCcccccccHHHHhccHHHHHHHHHHHHHHHHHHHHHHhHHhhc-cCCCc
Q 039541 279 KRLASRSNYQSDYGLESCCLSNMPPKAKNVIPKLDLYSSLKDLFNRKWALRRLLTIMALAFGIGVVYFGLLLGV-GNLSF 357 (521)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 357 (521)
.+.+ ++ ++ ..+.. .++.++...+..++............|.++ +..+.
T Consensus 190 ------~~~~---------------~~--~~-------~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~ 238 (394)
T PRK03699 190 ------HAPK---------------AD--KP-------VAKEK-WGIGVLFLAIAALLYILAQLTFISWVPEYAQKKFGM 238 (394)
T ss_pred ------cCcc---------------cc--Cc-------ccccc-CChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 0000 00 00 00000 123332222222222223323333445555 44566
Q ss_pred cHHHHH---HHHHHHhHhHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHHHH
Q 039541 358 NIYLSL---AFNGLLDIPAYLLTFILIERWSRKSSILTFCILSGTCSAICVAIGDEQEVLQIGLELASFFSACVAFNVLL 434 (521)
Q Consensus 358 ~~~~~~---~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 434 (521)
+..... ....++..++.++.+++.||+++|+.+.....+..+.+.++....+. +...+..++.+++.+..++...
T Consensus 239 s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~G~~~~~~~~~~~ 316 (394)
T PRK03699 239 SLEDAGNLVSNFWMAYMVGMWIFSFIVRFFDLQRILTVLAGLALVLMYLFVNTDDP--SHLLYAILGLGFFSSAIYTTII 316 (394)
T ss_pred ChHHhhHHHHHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHcCCc--hHHHHHHHHHHHHHHHHHHHHH
Confidence 554333 34456778899999999999999998887777666665555443333 3444556677777777788877
Q ss_pred HhhccccCchhhhhhhHHHHHhhhhhhhHHHHHHHhh--ccchhHHHHHHHHHHHHHhHhhhccc
Q 039541 435 VFGTELFTTCVRNSTTSLVRQAVNLGAAFSPVLISAG--RQNEFLSFGVFGLVVFCFGFFVVFLP 497 (521)
Q Consensus 435 ~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 497 (521)
+...|..|.+ ++...+.......+|..++|.+.|+. ..+....+.+.+++.+++.+.....+
T Consensus 317 ~~~~~~~~~~-~~~~~g~~~~~~~~g~~i~p~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 380 (394)
T PRK03699 317 TLGSQQTKVA-SPKLVNFILTCGTIGTMLTFVVTSPIVAHFGLQAALLTANGLYAVVFVMCILLG 380 (394)
T ss_pred HHHHHHccCC-CHHHHHHHHHhhhHHHHHHHHHHHHHHHHhCchhhhhhhHHHHHHHHHHHHHHH
Confidence 7777777644 57778888888899999999999863 34566666666666666655544444
No 48
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.98 E-value=2.8e-31 Score=257.42 Aligned_cols=325 Identities=21% Similarity=0.258 Sum_probs=243.9
Q ss_pred Cc-ceeeecceeeCCccccchhhHHHHHHHHHHhhhhhhhccccCCCCchHHHHHHHHHHHHHHHHHhccccHHHHHHHH
Q 039541 101 DT-TIISDWSLECAGSSILSGLPSSCFFIGCLLGGLALSTLGDSSSLGRKKLLFLSCFAMSITALATIFANNIWIYSTIR 179 (521)
Q Consensus 101 ~~-~i~~~~~~~~~~~~~~~~~~~s~~~lg~~i~~~~~g~l~dr~~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r 179 (521)
+| .+.+++|.+.++. +++.+++.++..+++++.|+++|| +|||+++.++.++.+++.++..+++|++.+++.|
T Consensus 19 ~~~~~~~~~~~s~~~~----~~~~~~~~~~~~~~~~~~g~l~dr--~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (352)
T PF07690_consen 19 LPLYLAEELGLSPSQI----GLLFSAFFLGSALFSPFAGYLSDR--FGRRRVLIIGLLLFALGSLLLAFASNFWLLLIAR 92 (352)
T ss_dssp HH-HHHCCSTTTSHCH----HHHHHHHHHHHHHHHHHHHHHHHH--S-HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
T ss_pred HHHHHHHccCCCHHHH----HHHHHHHHHHHHHHHHHHHHHHHH--cCCeeeEeehhhhhhhHHHHhhhhhhHHHHhhhc
Confidence 77 8899999999777 999999999999999999999999 9999999999999999977777778888999999
Q ss_pred HHhhccchhhHhhhhhheeeeecCcchhHHHHHHHHHHHHHHHHHHHH-HHhhcCCchhHHHHHHHHHHHHHHhhhceee
Q 039541 180 FVAGFFRAPIMTSVIVLLSEMVSKRWRGQVVIIGFTFFSFGLVSLPAV-AYLSRGSSWKMLYVWTSIPSIVCCIIIYPFI 258 (521)
Q Consensus 180 ~l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~i~~~i-~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~~ 258 (521)
++.|++.+...+...+++.|++|+++|++++++...+..+|.+++|.+ +.+.+..+||+.|++.+++.++..++...++
T Consensus 93 ~l~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~il~~~~~ 172 (352)
T PF07690_consen 93 FLLGIGSGFFSPASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLISYFGWRWAFLISAILSLIAAILFILFL 172 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHCHHCCHHHHHHHHHHHHHHHHHCCC
T ss_pred cccccccccccccccccccccchhhhhhhccccccchhhhhhhcccchhhhhhhccccccccccccchhhhhhhhHhhhh
Confidence 999999999999999999999999999999999999999999999999 5666678999999999999998875444555
Q ss_pred ecchhHHHhcCCHHHHHHHHHHHhhhcCCCCCCCccccccCCCCCccccCCCcccccc-cHHHHhccHHHHHHHHHHHHH
Q 039541 259 SESPRWLFIHGHEAEAMAVLKRLASRSNYQSDYGLESCCLSNMPPKAKNVIPKLDLYS-SLKDLFNRKWALRRLLTIMAL 337 (521)
Q Consensus 259 ~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~ 337 (521)
+++|+....+.+.++ +.+.++... .++.+++++.++......+..
T Consensus 173 ~~~~~~~~~~~~~~~----------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (352)
T PF07690_consen 173 PEPPPPRERESPKES----------------------------------ESKKPKPLKPGFKSLFKNPVLWILLIAFFLF 218 (352)
T ss_dssp ---STTTT--SSTTT----------------------------------T--HHHCCCH-CTHHHHHHCCHHHHHHHHHH
T ss_pred hhccccccccccccc----------------------------------ccccccccccccccccccchhhhhhhhhhHH
Confidence 554321000000000 000000011 245566666554223333333
Q ss_pred HHHHHHHHHhHHhh-ccCCCcc-HHHHH---HHHHHHhHhHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHhcCCc-h
Q 039541 338 AFGIGVVYFGLLLG-VGNLSFN-IYLSL---AFNGLLDIPAYLLTFILIERWSRKSSILTFCILSGTCSAICVAIGDE-Q 411 (521)
Q Consensus 338 ~~~~~~~~~~~~~~-~~~~~~~-~~~~~---~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~i~~~~~~~~~~~-~ 411 (521)
.+.........|.+ .+..+.+ ..... .+..+..+++.++.+++.||+++|+..........+..+.+...... +
T Consensus 219 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (352)
T PF07690_consen 219 FFVFSGFSFFLPLYLQEVLGFSGPSQAGLLFSIFGIVGIIGSLLAGRLSDRFGRRRRLLIAILLLILGALGLLLLPFSSS 298 (352)
T ss_dssp HHHHHHHHHHHHHHCCHHHHCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHCCSHHHCH
T ss_pred HHHHHHhhcccchhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 33444444555554 4555555 34333 44556667778999999999999887777777666666655544333 2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhccccCchhhhhhhHHHHHhhhhhhhHHH
Q 039541 412 EVLQIGLELASFFSACVAFNVLLVFGTELFTTCVRNSTTSLVRQAVNLGAAFSP 465 (521)
Q Consensus 412 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p 465 (521)
..+.....++.+++.+...+....+..|.+|++.|+++.|+.+...++|+.++|
T Consensus 299 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~igP 352 (352)
T PF07690_consen 299 PVWLIIALFLIGFGFGIVFPILFSLIQELVPPEYRGTAFGLFNSIGSLGGIIGP 352 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHCHHHHHHHHCCCHTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence 245566777788888888999999999999999999999999999999999988
No 49
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.98 E-value=1.7e-29 Score=246.95 Aligned_cols=356 Identities=14% Similarity=0.103 Sum_probs=254.6
Q ss_pred HHHHHHHHHHHHHHHhhhhccccCCcccccCCcccccCCccccccccCcceecCCCCcceeeecceeeCCccccchhhHH
Q 039541 45 VILISLLLIFESQQTFISVYTDEEPTWHCINNTTTCSSSSDICTLSKSAWAWDRPSDTTIISDWSLECAGSSILSGLPSS 124 (521)
Q Consensus 45 ~~~~~l~~~~~~~~~~~~~~~~~~p~~~c~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s 124 (521)
+.++.++.++.........+. +|.+.+++|.+.++. |++.+
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~-----------------------------------lp~~~~~~~~s~~~~----G~~~s 48 (381)
T PRK03633 8 VLLLLCGLLLLTLAIAVLNTL-----------------------------------VPLWLAQEHLPTWQV----GVVSS 48 (381)
T ss_pred HHHHHHHHHHHHHhhhhHHHH-----------------------------------HHHHHHHcCCCHHHH----HHHHH
Confidence 445556777777787778788 899999999998666 99999
Q ss_pred HHHHHHHHhhhhhhhccccCCCCchHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHhhccchhhHhhhhhheeeeecCc
Q 039541 125 CFFIGCLLGGLALSTLGDSSSLGRKKLLFLSCFAMSITALATIFANNIWIYSTIRFVAGFFRAPIMTSVIVLLSEMVSKR 204 (521)
Q Consensus 125 ~~~lg~~i~~~~~g~l~dr~~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~ 204 (521)
.+.++..+++++.|+++|| +|||+++..+.++.+++.+++++++|++.+++.|+++|++.+...+...+.+.+..+++
T Consensus 49 ~~~l~~~~~~~~~g~l~dr--~g~k~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~ 126 (381)
T PRK03633 49 SYFTGNLVGTLLAGYVIKR--IGFNRSYYLASLIFAAGCAGLGLMVGFWSWLAWRFVAGIGCAMIWVVVESALMCSGTSR 126 (381)
T ss_pred HHHHHHHHHHHhHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHH
Confidence 9999999999999999999 99999999999999999999999999999999999999999998888888888889999
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHH-hhcCCchhHHHHHHHHHHHHHHhhhceeeecchhHHHhcCCHHHHHHHHHHHhh
Q 039541 205 WRGQVVIIGFTFFSFGLVSLPAVAY-LSRGSSWKMLYVWTSIPSIVCCIIIYPFISESPRWLFIHGHEAEAMAVLKRLAS 283 (521)
Q Consensus 205 ~rg~~~~~~~~~~~~G~~i~~~i~~-~~~~~~wr~~f~~~~~~~~~~~~~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~ 283 (521)
+|++++++...+.++|..+||.++. +.+...|+..+ ..+........+.+...++++
T Consensus 127 ~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~--------------------- 184 (381)
T PRK03633 127 NRGRLLAAYMMVYYLGTVLGQLLVSKVSTELMSVLPW-VTGLVLAAILPLLFTRILNQQ--------------------- 184 (381)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcccccccchHHH-HHHHHHHHHHHHHHhcccCCC---------------------
Confidence 9999999999999999999999954 44432233332 222222221111111111110
Q ss_pred hcCCCCCCCccccccCCCCCccccCCCcccccccHHHHhccHHHHHHHHHHHHHHHHHHHHHHhHHhhccCCCccHHHH-
Q 039541 284 RSNYQSDYGLESCCLSNMPPKAKNVIPKLDLYSSLKDLFNRKWALRRLLTIMALAFGIGVVYFGLLLGVGNLSFNIYLS- 362 (521)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 362 (521)
. + ++ ...+.++++++|.++......+...+.....+..+|.+.++.+.+....
T Consensus 185 -~------------------~---~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~g~s~~~~g 238 (381)
T PRK03633 185 -A------------------E---NH----DSTSIWPMLKLRQARLGVNGCIISGIVLGSLYGLMPLYLNHQGMSDASIG 238 (381)
T ss_pred -C------------------C---CC----CCCCHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHH
Confidence 0 0 00 0014456677776554332223333333444445676666666554332
Q ss_pred --HHHHHHHhHhHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHHHHHhhccc
Q 039541 363 --LAFNGLLDIPAYLLTFILIERWSRKSSILTFCILSGTCSAICVAIGDEQEVLQIGLELASFFSACVAFNVLLVFGTEL 440 (521)
Q Consensus 363 --~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 440 (521)
.....++.+++.+..+++.||+++|+.+..+..+..++...+. .. ........+.+++.....+.....+.|.
T Consensus 239 ~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~--~~---~~~~~~~~l~g~~~~~~~p~~~~~~~~~ 313 (381)
T PRK03633 239 FWMALLVSAGILGQWPIGRLADRFGRLLVLRVQVFVVILGSIAML--SQ---AAMAPALFILGAAGFTLYPVAMAWACEK 313 (381)
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHcCcHHHHHHHHHHHHHHHHHHh--hh---HHHHHHHHHHHHHHHhHHHHHHHHHHcc
Confidence 3345567788999999999999999988888777776655443 11 1223344555655566778888888999
Q ss_pred cCchhhhhhhHHHHHhhhhhhhHHHHHHHhh--ccchhHHHHHHHHHHHHHhHhhh
Q 039541 441 FTTCVRNSTTSLVRQAVNLGAAFSPVLISAG--RQNEFLSFGVFGLVVFCFGFFVV 494 (521)
Q Consensus 441 ~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 494 (521)
.|++.++.+.+..+....+|++++|.+.|+. ..++...|.+.+.+.++..+..+
T Consensus 314 ~~~~~~~~~~~~~~~~~~lG~~igp~~~G~l~~~~g~~~~f~~~~~~~l~~~~~~~ 369 (381)
T PRK03633 314 VEHHELVAMNQALLLSYTVGSLLGPSFTAMLMQNYSDNLLFIMIASVSFIYLLMLL 369 (381)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHH
Confidence 9988888888888888899999999999973 34566677776666665544433
No 50
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.97 E-value=1.6e-29 Score=251.62 Aligned_cols=395 Identities=11% Similarity=0.017 Sum_probs=258.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhhccccCCcccccCCcccccCCccccccccCcceecCCCCcceeeecceeeCCccccc
Q 039541 40 PQFIQVILISLLLIFESQQTFISVYTDEEPTWHCINNTTTCSSSSDICTLSKSAWAWDRPSDTTIISDWSLECAGSSILS 119 (521)
Q Consensus 40 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~p~~~c~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 119 (521)
.++..+....+.+.....+.....+. .|.+++ +|++.++.
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------------------~p~~~~-~g~s~~~~---- 63 (438)
T TIGR00712 24 LRWQVFLGIFFGYAAYYLVRKNFALA-----------------------------------MPYLVE-QGFSKGEL---- 63 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHhccHHhh-----------------------------------hHHHHH-cCCCHhHh----
Confidence 34566666666667777777766777 777776 59998777
Q ss_pred hhhHHHHHHHHHHhhhhhhhccccCCCCchHHHHHHHHHHHHHHHHHhcc----ccHHHHHHHHHHhhccchhhHhhhhh
Q 039541 120 GLPSSCFFIGCLLGGLALSTLGDSSSLGRKKLLFLSCFAMSITALATIFA----NNIWIYSTIRFVAGFFRAPIMTSVIV 195 (521)
Q Consensus 120 ~~~~s~~~lg~~i~~~~~g~l~dr~~~Grr~~l~~~~~~~~~~~~~~~~~----~~~~~l~~~r~l~G~~~g~~~~~~~~ 195 (521)
+++.+++.++..+++++.|+++|| +|||+++..+.++.+++.++.++. ++++.+.+.|++.|++.|...+....
T Consensus 64 g~~~~~~~~~~~~~~~~~G~l~dr--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~ 141 (438)
T TIGR00712 64 GFALSAISIAYGFSKFIMGSVSDR--SNPRVFLPAGLILSAAVMLLMGFVPWATSSIAIMFVLLFLNGWFQGMGWPPCGR 141 (438)
T ss_pred HHHHHHHHHHHHHhhhccchhhhc--cCCceehHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHhhcchHHHHH
Confidence 999999999999999999999999 999999999999999999887764 46788889999999999998898889
Q ss_pred heeeeecCcchhHHHHHHHHHHHHHHHHHHHH-HHhhc-CCchhHHHHHHHHHHHHHHhhhceeeecchhHHHhcCCHHH
Q 039541 196 LLSEMVSKRWRGQVVIIGFTFFSFGLVSLPAV-AYLSR-GSSWKMLYVWTSIPSIVCCIIIYPFISESPRWLFIHGHEAE 273 (521)
Q Consensus 196 ~i~~~~~~~~rg~~~~~~~~~~~~G~~i~~~i-~~~~~-~~~wr~~f~~~~~~~~~~~~~~~~~~~esp~~~~~~~~~~~ 273 (521)
++.|++|+++|++++++.+.+..+|..+++.+ +.... ..+||+.|++.+++.++..++.++++||+|+....+ +.++
T Consensus 142 ~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~-~~~~ 220 (438)
T TIGR00712 142 TMVHWWSQSERGTIVSIWNCAHNIGGGIPPLLVLLGMAWFNDWHAALYFPAICAIIVALFAFAMMRDTPQSCGLP-PIEE 220 (438)
T ss_pred HHHHhcCcccchhHHHHHHHHHHhHhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhccCCHHhcCCC-Cchh
Confidence 99999999999999999999999999988766 54443 469999999999888887656677788876531100 0000
Q ss_pred HHHHHHHHhhhcCCCCCCCccccccCCCCCccccCCCccccccc-HHHHhccHHHHHHHHHHHHHHHHHHHHHHhHHhhc
Q 039541 274 AMAVLKRLASRSNYQSDYGLESCCLSNMPPKAKNVIPKLDLYSS-LKDLFNRKWALRRLLTIMALAFGIGVVYFGLLLGV 352 (521)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (521)
. +++..+ +. ..+ + +++.+.++. .+.+++++.++...+...+............|.++
T Consensus 221 ~----------~~~~~~--------~~-~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l 278 (438)
T TIGR00712 221 Y----------RNDYPD--------DY-NEK--A-EQELTAKEIFMQYVLPNKLLWYIAIANVFVYLLRYGVLDWSPTYL 278 (438)
T ss_pred c----------cccccc--------cc-ccc--c-ccccchHHHHHHHHccCchHHHHHHHHHHHHHHHHHHHHhHHHHH
Confidence 0 000000 00 000 0 000000111 23467888776665554444444333334445555
Q ss_pred cC-CCccHH---HHHHHHHHHhHhHHHHHHHHHhhcCCchHHHHHHHHHH---HHHHHHHhcCCchHHHHHHHHHHHHHH
Q 039541 353 GN-LSFNIY---LSLAFNGLLDIPAYLLTFILIERWSRKSSILTFCILSG---TCSAICVAIGDEQEVLQIGLELASFFS 425 (521)
Q Consensus 353 ~~-~~~~~~---~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~---i~~~~~~~~~~~~~~~~~~~~~~~~~~ 425 (521)
++ .+.+.. ....+..+.++++.++.|++.||+++++....+..... ++.+.+......+.+......+..+++
T Consensus 279 ~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 358 (438)
T TIGR00712 279 KEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFKGNRGATGVFFMTLVTIAVIVYWMNPAGNPLVDMICMIVIGFL 358 (438)
T ss_pred HHccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHH
Confidence 43 455543 33445667788899999999999965432222222211 111222222221212222333333433
Q ss_pred HHHHHHHHHHhhccccCchhhhhhhHHHHHhhhhhh-hHHHHHHHh--hccchhHHHHHHHHHHHHHhHh-hhccccC
Q 039541 426 ACVAFNVLLVFGTELFTTCVRNSTTSLVRQAVNLGA-AFSPVLISA--GRQNEFLSFGVFGLVVFCFGFF-VVFLPET 499 (521)
Q Consensus 426 ~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~-~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 499 (521)
.............|.+|++.|+++.|+.+....+|+ +++|.+.|. ...++...+.+..++.+++.+. .+.++|.
T Consensus 359 ~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~gg~~~gp~l~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 436 (438)
T TIGR00712 359 IYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVVMIGE 436 (438)
T ss_pred HccHHHHHHHHHHHhcChhheeeehhhhchHHHhhhhhhcchhHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 222222334567799999999999999998888875 689999886 3345667777666666555554 3445554
No 51
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.97 E-value=3.1e-29 Score=246.80 Aligned_cols=341 Identities=12% Similarity=0.061 Sum_probs=236.1
Q ss_pred CcceeeecceeeCCccccchhhHHHHHHHHHHhhhhhhhccccCCCCchHHHHHHHHHHHHHHHHHhccccHHHHHHHHH
Q 039541 101 DTTIISDWSLECAGSSILSGLPSSCFFIGCLLGGLALSTLGDSSSLGRKKLLFLSCFAMSITALATIFANNIWIYSTIRF 180 (521)
Q Consensus 101 ~~~i~~~~~~~~~~~~~~~~~~~s~~~lg~~i~~~~~g~l~dr~~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~ 180 (521)
+|.+.++++.+.++. ++..+++.+++.++++++|+++|| +|||++++.+.++++++++++++++|++.++++|+
T Consensus 39 l~~i~~~~~~~~~~~----~~~~s~~~~~~~~~~~~~G~l~dr--~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~ 112 (413)
T PRK15403 39 IINVVRDFNADVSLA----PASVSLYLAGGMALQWLLGPLSDR--IGRRPVLITGALIFTLACAATLFTTSMTQFLIARF 112 (413)
T ss_pred HHHHHHHhCCCHHHH----HHHHHHHHHHHHHHHHhhhHHHHH--cCchHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 899999999999776 999999999999999999999999 99999999999999999999999999999999999
Q ss_pred HhhccchhhHhhhhhheeeeecCcchhHHHHHHHHHHHHHHHHHHHHH-HhhcCCchhHHHHHHHHHHHHHHhhhceeee
Q 039541 181 VAGFFRAPIMTSVIVLLSEMVSKRWRGQVVIIGFTFFSFGLVSLPAVA-YLSRGSSWKMLYVWTSIPSIVCCIIIYPFIS 259 (521)
Q Consensus 181 l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~i~~~i~-~~~~~~~wr~~f~~~~~~~~~~~~~~~~~~~ 259 (521)
++|++.+...+...+++.|++|+++|++++++...+..+|..+||.++ .+.+..|||+.|++.++..++..+..++.+|
T Consensus 113 l~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~lp 192 (413)
T PRK15403 113 IQGTSICFIATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALMHFVHWKVLFAIIAVMGLIAFVGLLLAMP 192 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 999999877777888899999999999999999999999999999994 5666779999999999888877755556678
Q ss_pred cchhHHHhcCCHHHHHHHHHHHhhhcCCCCCCCccccccCCCCCccccCCCcccccccHHHHhccHHHHHHHHHHHHHHH
Q 039541 260 ESPRWLFIHGHEAEAMAVLKRLASRSNYQSDYGLESCCLSNMPPKAKNVIPKLDLYSSLKDLFNRKWALRRLLTIMALAF 339 (521)
Q Consensus 260 esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 339 (521)
|+++. +++..+ ..+..++++.++++|.++...+...+...
T Consensus 193 ~~~~~---~~~~~~-------------------------------------~~~~~~~~~~ll~~~~~~~~~l~~~~~~~ 232 (413)
T PRK15403 193 ETVKR---GAVPFS-------------------------------------AKSVLRDFRNVFRNRLFLTGAATLSLSYI 232 (413)
T ss_pred CCccc---cCCCCC-------------------------------------hHHHHHHHHHHHcCHHHHHHHHHHHHHHH
Confidence 86421 000000 00001256788899988776665555444
Q ss_pred HHHHHHHhHHhhccC-CCccHHHHHH---HHHHHhHhHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHhc---CCchH
Q 039541 340 GIGVVYFGLLLGVGN-LSFNIYLSLA---FNGLLDIPAYLLTFILIERWSRKSSILTFCILSGTCSAICVAI---GDEQE 412 (521)
Q Consensus 340 ~~~~~~~~~~~~~~~-~~~~~~~~~~---~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~i~~~~~~~~---~~~~~ 412 (521)
.........|.++++ .+.+...... ....+.+++..+.+.+.+|..+++.......+..++..++... .....
T Consensus 233 ~~~~~~~~~P~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~ig~~l~~~~~~~~~~~~ 312 (413)
T PRK15403 233 PMMSWVAVSPVILIDAGGMTTSQFAWTQVPVFGAVIVANAIVARFVKDPTEPRFIWRAVPIQLVGLALLIVGNLLWPHVW 312 (413)
T ss_pred HHHHHHHhChHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchhHHHHHHHHHHHHHHHHHHHHHHccccH
Confidence 444444445655554 3555443332 2334555666666666544444343322222222222222111 11111
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccccCchhhhhhhHHHHHhhhhhhhHHHHHHHhh-ccchhHHHHHHHHHHHH
Q 039541 413 VLQIGLELASFFSACVAFNVLLVFGTELFTTCVRNSTTSLVRQAVNLGAAFSPVLISAG-RQNEFLSFGVFGLVVFC 488 (521)
Q Consensus 413 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~~-~~~~~~~~~~~~~~~~~ 488 (521)
+..++..++.+++.+...+..........+ ..+|++.++.+.....+...++...++. ..+...++...+++..+
T Consensus 313 ~~~~~~~~l~~~G~~~~~p~~~~~al~~~~-~~~G~a~a~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 388 (413)
T PRK15403 313 LWSVLGTSLYAFGIGLIFPTLFRFTLFSNN-LPKGTVSASLNMVILMVMAVSVEIGRWLWFNGGRLPFHLLAVVAGV 388 (413)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHhccCC-CCCcHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHH
Confidence 234556667777777777766643332222 2368888888888877777888777763 33455555555554443
No 52
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.97 E-value=1.7e-30 Score=254.56 Aligned_cols=343 Identities=15% Similarity=0.098 Sum_probs=242.5
Q ss_pred CcceeeecceeeCCccccchhhHHHHHHHHHHhhhhhhhccccCCCCchHHHHHHHHHHHHHHHHHhccccHHHHHHHHH
Q 039541 101 DTTIISDWSLECAGSSILSGLPSSCFFIGCLLGGLALSTLGDSSSLGRKKLLFLSCFAMSITALATIFANNIWIYSTIRF 180 (521)
Q Consensus 101 ~~~i~~~~~~~~~~~~~~~~~~~s~~~lg~~i~~~~~g~l~dr~~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~ 180 (521)
.|.+.+++|++.++. |++.+++.++..+++++.|+++|| +|||++++++.++.+++.++.+++++++.+++.|+
T Consensus 18 ~~~~~~~~g~s~~~~----g~~~~~~~~~~~~~~~~~g~l~dr--~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (379)
T TIGR00881 18 MPYLVEEIGLSKTDL----GLLLSSFSIAYGISKFVMGSVSDR--SNPRVFLPIGLILCAIVNLFFGFSTSLWVMAALWA 91 (379)
T ss_pred hHHHHHHhCCCHhHH----HHHHHHHHHHHHhhhhhhhHHHHh--hCCeehhHHHHHHHHHHHHHHHHhhhHHHHHHHHH
Confidence 899999999999777 999999999999999999999999 99999999999999999999999999999999999
Q ss_pred HhhccchhhHhhhhhheeeeecCcchhHHHHHHHHHHHHHHHHHH-HH-HHhhcCCchhHHHHHHHHHHHHHHhhhceee
Q 039541 181 VAGFFRAPIMTSVIVLLSEMVSKRWRGQVVIIGFTFFSFGLVSLP-AV-AYLSRGSSWKMLYVWTSIPSIVCCIIIYPFI 258 (521)
Q Consensus 181 l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~i~~-~i-~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~~ 258 (521)
+.|++.+...+...+++.|++|+++|++++++.+.+..+|..+++ .+ +.+....+||+.|++.+++.++..++.+++.
T Consensus 92 ~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (379)
T TIGR00881 92 LNGIFQGMGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLFGIAELYSWHWVFIVPGIIAIIVSLICFLLL 171 (379)
T ss_pred HHHhhccccCCchHHHHHHhcCHhhheeeEeehhccchhHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHheee
Confidence 999999999999999999999999999999999999999999999 45 4555678999999998888877765777778
Q ss_pred ecchhHHHhcCCHHHHHHHHHHHhhhcCCCCCCCccccccCCCCCccccCCCcccccccHHHHhccHHHHHHHHHHHHHH
Q 039541 259 SESPRWLFIHGHEAEAMAVLKRLASRSNYQSDYGLESCCLSNMPPKAKNVIPKLDLYSSLKDLFNRKWALRRLLTIMALA 338 (521)
Q Consensus 259 ~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 338 (521)
||+|+... ..++ ++.. ..+.+.. +++++++....+...+.++++|.++...+......
T Consensus 172 ~~~~~~~~---~~~~-----------~~~~------~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (379)
T TIGR00881 172 RDSPQSCG---LPPA-----------EEMP------NEEPDGD--AEKKEEELTKKQIFLQYVLLNKVLWYISLGYVFVY 229 (379)
T ss_pred CCCccccc---cCcc-----------ccCc------ccccccc--cccccccccchHHHHHHHHhcchHHHHHHHHHHHH
Confidence 87764210 0000 0000 0000000 00000111111224567788887766555555554
Q ss_pred HHHHHHHHhHHhhc-cCCCccHH---HHHHHHHHHhHhHHHHHHHHHhhcCC-chHHH-HHH-HHHHHHHHHHHhcCCch
Q 039541 339 FGIGVVYFGLLLGV-GNLSFNIY---LSLAFNGLLDIPAYLLTFILIERWSR-KSSIL-TFC-ILSGTCSAICVAIGDEQ 411 (521)
Q Consensus 339 ~~~~~~~~~~~~~~-~~~~~~~~---~~~~~~~~~~~~~~~~~g~l~dr~g~-~~~~~-~~~-~~~~i~~~~~~~~~~~~ 411 (521)
..........+.++ +..+.+.. .......++.+++.++.+++.||..+ |+... ... ....++...........
T Consensus 230 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (379)
T TIGR00881 230 VVRTGILDWSPLYLTQEKGFSKEKASWAFTLYELGGLVGTLLAGWLSDKLFNGRRGPLAVFFMALIIVSLLVYWLNPAAN 309 (379)
T ss_pred HHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHcchhHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHhcCcchh
Confidence 44443333344444 34455433 33445567788999999999998643 33222 221 12222222222212222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhccccCchhhhhhhHHHHHhhhhhhhHHHHHHHhh
Q 039541 412 EVLQIGLELASFFSACVAFNVLLVFGTELFTTCVRNSTTSLVRQAVNLGAAFSPVLISAG 471 (521)
Q Consensus 412 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~~ 471 (521)
.+...+..++.++......+....+..|.+|++.|+++.|+.+....+|+.++|.+.|..
T Consensus 310 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l 369 (379)
T TIGR00881 310 PLMDLICLFALGFLVYGPQMLIGVIASELAPKKAAGTAAGFVGFFAYLGGILAGLPLGYL 369 (379)
T ss_pred HHHHHHHHHHHHHHHhhhhHHHHHHHHHhcCcchhHHHHHHHHHhhhhhhhhhhhhHHHH
Confidence 233444455555555555566678889999999999999999999999999999998863
No 53
>PRK10133 L-fucose transporter; Provisional
Probab=99.97 E-value=5.1e-29 Score=246.45 Aligned_cols=347 Identities=12% Similarity=0.095 Sum_probs=252.3
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHhhhhccccCCcccccCCcccccCCccccccccCcceecCCCCcceeeecceeeCCccc
Q 039541 38 GLPQFIQVILISLLLIFESQQTFISVYTDEEPTWHCINNTTTCSSSSDICTLSKSAWAWDRPSDTTIISDWSLECAGSSI 117 (521)
Q Consensus 38 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~p~~~c~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 117 (521)
++.....+.++.+..+..++........ .|.+++++|+++++.
T Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------------------~p~i~~~~~~s~~~~-- 63 (438)
T PRK10133 21 SRSYIIPFALLCSLFFLWAVANNLNDIL-----------------------------------LPQFQQAFTLTNFQA-- 63 (438)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHH-----------------------------------HHHHHHHhCCCHHHH--
Confidence 3444556666777778888888888888 899999999999776
Q ss_pred cchhhHHHHHHHHHHhhhhhhhccccCCCCchHHHHHHHHHHHHHHHHH---hccccHHHHHHHHHHhhccchhhHhhhh
Q 039541 118 LSGLPSSCFFIGCLLGGLALSTLGDSSSLGRKKLLFLSCFAMSITALAT---IFANNIWIYSTIRFVAGFFRAPIMTSVI 194 (521)
Q Consensus 118 ~~~~~~s~~~lg~~i~~~~~g~l~dr~~~Grr~~l~~~~~~~~~~~~~~---~~~~~~~~l~~~r~l~G~~~g~~~~~~~ 194 (521)
|++.+.+.+++.+++++.|++.|| +|||+++..++++++++++++ .++++++.++++|+++|+|.|...+...
T Consensus 64 --gl~~~~~~~g~~i~~~~~g~l~dr--~G~r~~l~~g~~~~~~~~~l~~~~~~a~~~~~ll~~r~l~G~g~g~~~~~~~ 139 (438)
T PRK10133 64 --GLIQSAFYFGYFIIPIPAGILMKK--LSYKAGIITGLFLYALGAALFWPAAEIMNYTLFLVGLFIIAAGLGCLETAAN 139 (438)
T ss_pred --HHHHHHHHHHHHHHHHHHHHHHHH--hCcHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHhhHH
Confidence 999999999999999999999999 999999999999999999885 5689999999999999999999999999
Q ss_pred hheeeeecCcchhHHHHHHHHHHHHHHHHHHHHHH-hh-cC-------------------------CchhHHHHHHH-HH
Q 039541 195 VLLSEMVSKRWRGQVVIIGFTFFSFGLVSLPAVAY-LS-RG-------------------------SSWKMLYVWTS-IP 246 (521)
Q Consensus 195 ~~i~~~~~~~~rg~~~~~~~~~~~~G~~i~~~i~~-~~-~~-------------------------~~wr~~f~~~~-~~ 246 (521)
.++.|+.|+++|++.+++.+..+.+|..+++.++. +. .. .+||++|+... +.
T Consensus 140 ~~v~~~~~~~~~~~~~s~~~~~~~~G~~~g~~~g~~l~~~~~~~~~~~~~~~l~~~~~~~w~~~~~~~w~~~f~~~~~v~ 219 (438)
T PRK10133 140 PFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQSLILSNVPHQSQDVLDKMTPEQLSAYKHSLVLSVQTPYMIIVAIV 219 (438)
T ss_pred HHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhhhccChhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999877777777899999999999999998843 22 00 25666675433 33
Q ss_pred HHHHHhhhceeeecchhHHHhcCCHHHHHHHHHHHhhhcCCCCCCCccccccCCCCCccccCCCcccccccHHHHhccHH
Q 039541 247 SIVCCIIIYPFISESPRWLFIHGHEAEAMAVLKRLASRSNYQSDYGLESCCLSNMPPKAKNVIPKLDLYSSLKDLFNRKW 326 (521)
Q Consensus 247 ~~~~~~~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 326 (521)
.++..++....+||.+. ++.++ ++..+...++++++++|.
T Consensus 220 ~~~~~~~~~~~~p~~~~-----~~~~~-----------------------------------~~~~~~~~~~~~ll~~~~ 259 (438)
T PRK10133 220 LLVALLIMLTKFPALQS-----DNHSD-----------------------------------AKQGSFSASLSRLARIRH 259 (438)
T ss_pred HHHHHHHHHhcCCCCCc-----ccccc-----------------------------------ccccchhhhHHHHHhCch
Confidence 33333232333444211 00000 000001124567888888
Q ss_pred HHHHHHHHHHHHHHHHHHH-HhHHhhcc-CCCccHHHH---HHHHHHHhHhHHHHHHHHHhhcCCchHHHHHHHHHHHHH
Q 039541 327 ALRRLLTIMALAFGIGVVY-FGLLLGVG-NLSFNIYLS---LAFNGLLDIPAYLLTFILIERWSRKSSILTFCILSGTCS 401 (521)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~---~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~i~~ 401 (521)
++...+..++........+ |..++..+ ..+.++... .....++.++|+++++++.||+++|+++..+..+..+.+
T Consensus 260 ~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~g~s~~~ag~~~~~~~~~~~vG~~~~g~l~~r~g~~~~l~~~~~~~~~~~ 339 (438)
T PRK10133 260 WRWAVLAQFCYVGAQTACWSYLIRYAVEEIPGMTAGFAANYLTGTMVCFFIGRFTGTWLISRFAPHKVLAAYALIAMALC 339 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHH
Confidence 7665544434333333222 33334333 456655433 355667888999999999999999999888877776666
Q ss_pred HHHHhcCCchHHHHHHHHHHHHHHHHHHHHHHHHhhccccCchhhhhhhHHHHHhhhhhhhHHHHHHHh
Q 039541 402 AICVAIGDEQEVLQIGLELASFFSACVAFNVLLVFGTELFTTCVRNSTTSLVRQAVNLGAAFSPVLISA 470 (521)
Q Consensus 402 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~ 470 (521)
++..+.+.. .......+.+++.+..+|..++...+..|++ .+.+.++.. ...+|+.++|.+.|.
T Consensus 340 ~~~~~~~~~---~~~~~~~l~glg~~~i~P~~~s~a~~~~~~~-~~~as~l~~-~~~~g~~~~~~i~G~ 403 (438)
T PRK10133 340 LISAFAGGH---VGLIALTLCSAFMSIQYPTIFSLGIKNLGQD-TKYGSSFIV-MTIIGGGIVTPVMGF 403 (438)
T ss_pred HHHHHcCCh---HHHHHHHHHHHHHHHHHHHHHHHHHcccchh-hccchhHHh-HHhccchHHHHHHHH
Confidence 555544332 3345677889999999999999999998875 477888776 455778888888886
No 54
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.97 E-value=4e-29 Score=244.50 Aligned_cols=344 Identities=15% Similarity=0.145 Sum_probs=246.3
Q ss_pred Ccc-eeeecceeeCCccccchhhHHHHHHHHHHhhhhhhhccccCCCCchHHHHH-HHHHHHHHHHHHhccccHHHHHHH
Q 039541 101 DTT-IISDWSLECAGSSILSGLPSSCFFIGCLLGGLALSTLGDSSSLGRKKLLFL-SCFAMSITALATIFANNIWIYSTI 178 (521)
Q Consensus 101 ~~~-i~~~~~~~~~~~~~~~~~~~s~~~lg~~i~~~~~g~l~dr~~~Grr~~l~~-~~~~~~~~~~~~~~~~~~~~l~~~ 178 (521)
+|. +++++|.+..+. |++.+++.++..+.+++.|+++|| +||||.++. +.++..++.++++++++++.+++.
T Consensus 20 l~~~l~~~~g~s~~~~----g~~~~~~~~~~~~~~~~~g~l~Dr--~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 93 (375)
T TIGR00899 20 LSLFLSEEVRARPAMI----GLFYTGSAIVGIAVSQLLATRSDY--QGDRKGLILFCCLLAALACLLFAWNRNYFLLLVL 93 (375)
T ss_pred HHHHHHcccCCCHHHH----HHHHHHHHHHHHHHHHHHHHHHhc--cCCchHHHHHHHHHHHHHHHHHHhcchHHHHHHH
Confidence 443 678999998666 999999999999999999999999 999887654 666667788889999999999999
Q ss_pred HHHhhccchhhHhhhhhheeeeecCcchhHH--HHHHHHHHHHHHHHHHHH-HHhhcCCchhHHHHHHHHHHHHHHhhhc
Q 039541 179 RFVAGFFRAPIMTSVIVLLSEMVSKRWRGQV--VIIGFTFFSFGLVSLPAV-AYLSRGSSWKMLYVWTSIPSIVCCIIIY 255 (521)
Q Consensus 179 r~l~G~~~g~~~~~~~~~i~~~~~~~~rg~~--~~~~~~~~~~G~~i~~~i-~~~~~~~~wr~~f~~~~~~~~~~~~~~~ 255 (521)
|++.|.+.+...|...+++.|+.|+++|++. .+....+.++|.+++|.+ +.+.+..+||+.|++.+++.++..++.+
T Consensus 94 ~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~~~~~~~f~~~~~~~~~~~~~~~ 173 (375)
T TIGR00899 94 GVLLSSFASTANPQLFALAREHADRTGREAVMFSSVMRAQISLAWVIGPPLAFWLALGFGFTVMFLTAALAFVLCGVLVW 173 (375)
T ss_pred HHHHHhhhhhhHHHHHHHHHHHhhhcchhhHHHHHHHHHHHhHHHHHhhhHHHHHHHhcccHHHHHHHHHHHHHHHHHHH
Confidence 9999988888888888889999887777755 578888889999999988 6676778999999999988777775666
Q ss_pred eeeecchhHHHhcCCHHHHHHHHHHHhhhcCCCCCCCccccccCCCCCccccCCCcccccccHHHHhccHHHHHHHHHHH
Q 039541 256 PFISESPRWLFIHGHEAEAMAVLKRLASRSNYQSDYGLESCCLSNMPPKAKNVIPKLDLYSSLKDLFNRKWALRRLLTIM 335 (521)
Q Consensus 256 ~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 335 (521)
+++||+|+.. .++ . . ..+.++.++++.++......+
T Consensus 174 ~~~~~~~~~~-----~~~-----------~-----------------------~-----~~~~~~~~~~~~~~~~~~~~~ 209 (375)
T TIGR00899 174 LFLPSYPRGA-----PGA-----------L-----------------------T-----RLEVRGLLASRDTRLLFVACT 209 (375)
T ss_pred HhCCCcccCc-----ccc-----------c-----------------------C-----cchhhhhhcCcchHHHHHHHH
Confidence 6678865310 000 0 0 012233455665544433333
Q ss_pred HHHHHHHHHHHhHHhhc-cCCCccHHHHHH---HHHHHhHhHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHhcCCch
Q 039541 336 ALAFGIGVVYFGLLLGV-GNLSFNIYLSLA---FNGLLDIPAYLLTFILIERWSRKSSILTFCILSGTCSAICVAIGDEQ 411 (521)
Q Consensus 336 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~---~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~i~~~~~~~~~~~~ 411 (521)
..+..........|.++ ++.+.+...... ...+..+++.++.+++.||++||+.+.++..+..+....+....+
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~-- 287 (375)
T TIGR00899 210 LMWGCNILYIINMPLLIIHELGLPDKLAGLMMGTAAGLEIPFMLLAGYLIKRFGKRRLMLLAALAGVAFYTGLAADNS-- 287 (375)
T ss_pred HHHHHHHHHHhhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHH--
Confidence 33333333333334433 344554433332 233455667789999999999999888777665555444333222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhccccCchhhhhhhHHHHHhhhhhhhHHHHHHHh--hccchhHHHHHHHHHHHHH
Q 039541 412 EVLQIGLELASFFSACVAFNVLLVFGTELFTTCVRNSTTSLVRQAVNLGAAFSPVLISA--GRQNEFLSFGVFGLVVFCF 489 (521)
Q Consensus 412 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~--~~~~~~~~~~~~~~~~~~~ 489 (521)
.+...+..++.+++.+...+....+..|..|++ ++++.++.+...++|..++|.+.+. ...++...+.+.+++.+++
T Consensus 288 ~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~g~~~~g~~~~~~g~~~~~~~~~~~~~~~ 366 (375)
T TIGR00899 288 LWALLMLQLLNAIFIGILAGIGMLYFQDLMPGR-AGAATTLYTNTGRVGWIIAGSVGGILAERWSYHAVYWFAIVMLIVA 366 (375)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcch-hhHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHH
Confidence 244455566677777777788888889988875 5799999999999999999999986 3345677777777777777
Q ss_pred hHhhhccc
Q 039541 490 GFFVVFLP 497 (521)
Q Consensus 490 ~~~~~~~~ 497 (521)
.+....++
T Consensus 367 ~~~~~~~~ 374 (375)
T TIGR00899 367 LFCLLLIK 374 (375)
T ss_pred HHHHheec
Confidence 76665554
No 55
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.97 E-value=9.9e-29 Score=241.00 Aligned_cols=360 Identities=15% Similarity=0.167 Sum_probs=265.1
Q ss_pred eeecceeeCCccccchhhHHHHHHHHHHhhhhhhhccccCCCCchHHHHHHHHHHHHHHHHHhccc--cHHHHHHHHHHh
Q 039541 105 ISDWSLECAGSSILSGLPSSCFFIGCLLGGLALSTLGDSSSLGRKKLLFLSCFAMSITALATIFAN--NIWIYSTIRFVA 182 (521)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~s~~~lg~~i~~~~~g~l~dr~~~Grr~~l~~~~~~~~~~~~~~~~~~--~~~~l~~~r~l~ 182 (521)
..+++++.+|. |++.+.++.|+++++++.|+++|| +|-|+++..+.++.++++++..++. +++.+++.|++|
T Consensus 65 ~~~~~ws~~~k----~~i~ss~~~G~i~~~iP~g~l~~k--~G~r~v~~~~~~~sa~~t~l~P~aa~~~~~~~~~~R~lq 138 (466)
T KOG2532|consen 65 AGEYDWSSTEK----GLIFSSFFWGYILGQIPGGYLADK--FGARRVFFISGLISALLTLLTPLAASIGFYLLLVLRFLQ 138 (466)
T ss_pred CceecCCHHHH----HHHHHHHHHHHHHHHcCcHHHHHH--cCchHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHh
Confidence 67899999887 999999999999999999999999 9999999999999999999998874 566889999999
Q ss_pred hccchhhHhhhhhheeeeecCcchhHHHHHHHHHHHHHHHHHHHH-HHhhcC-CchhHHHHHHHHHHHHHHhhhceeeec
Q 039541 183 GFFRAPIMTSVIVLLSEMVSKRWRGQVVIIGFTFFSFGLVSLPAV-AYLSRG-SSWKMLYVWTSIPSIVCCIIIYPFISE 260 (521)
Q Consensus 183 G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~i~~~i-~~~~~~-~~wr~~f~~~~~~~~~~~~~~~~~~~e 260 (521)
|++.|..+|+...+.+.|.|+++|++..++...+..+|.+++..+ |++.+. +||+++|++.++.+++..++.+++..|
T Consensus 139 Gl~~g~~~pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s~~GW~sifY~~g~~g~i~~~~w~~~~~d 218 (466)
T KOG2532|consen 139 GLGQGVLFPAIGSILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCESSLGWPSIFYVFGIVGLIWFILWFLFYSD 218 (466)
T ss_pred HHHHhHHHhhhhceeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccCCCCchHHHHHHHHHHHHHHHHHHHhcC
Confidence 999999999999999999999999999999999999999998766 888887 999999999999999999666677788
Q ss_pred chhHHHhcCCHHHHHHHHHHHhhhcCCCCCCCccccccCCCCCccccCCCcccccccHHHHhccHHHHHHHHHHHHHHHH
Q 039541 261 SPRWLFIHGHEAEAMAVLKRLASRSNYQSDYGLESCCLSNMPPKAKNVIPKLDLYSSLKDLFNRKWALRRLLTIMALAFG 340 (521)
Q Consensus 261 sp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 340 (521)
+|... +.-.+ ++++++.+ ...+ +..+.+.+.+++++++++.+|...+..+....+
T Consensus 219 ~P~~h--~~is~---~El~~I~~-~k~~-------------------~~~~~~~~vP~~~i~ts~~vwai~~~~f~~~~~ 273 (466)
T KOG2532|consen 219 SPSKH--PNISE---KELKYIEK-GKSE-------------------AHVKKKPPVPYKAILTSPPVWAIWISAFGGNWG 273 (466)
T ss_pred CcccC--CCCCH---HHHHHHHh-cccc-------------------cccCCCCCCCHHHHHcCHHHHHHHHHHHHHHHH
Confidence 87531 11111 12223311 1110 000011345899999999988877777666666
Q ss_pred HHHHHHhHHhhcc-CCCccHHHHH---HHHHHHhHhHHHHHHHHHhhcCC---------chHHHHHHHHHHHHHHHHHhc
Q 039541 341 IGVVYFGLLLGVG-NLSFNIYLSL---AFNGLLDIPAYLLTFILIERWSR---------KSSILTFCILSGTCSAICVAI 407 (521)
Q Consensus 341 ~~~~~~~~~~~~~-~~~~~~~~~~---~~~~~~~~~~~~~~g~l~dr~g~---------~~~~~~~~~~~~i~~~~~~~~ 407 (521)
......+.|.+++ .++.+....+ .+..+...+..+++|.++||+.+ |..-.++....+++++.+.+.
T Consensus 274 ~~~l~~y~PtY~~~VL~f~v~~~G~~salP~l~~~~~k~~~g~lsD~l~~~~ls~t~~rkifn~i~~~~~ai~l~~l~~~ 353 (466)
T KOG2532|consen 274 FYLLLTYLPTYLKEVLGFDVRETGFLSALPFLAMAIVKFVAGQLSDRLTFRILSETTVRKIFNTIAFGGPAVFLLVLAFT 353 (466)
T ss_pred HHHHHHHhhHHHHHHhCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCchHhHHHHHHhHHHHHHHHHHHeeeec
Confidence 6555545555554 4666654444 34456777888999999998755 334456667777777777776
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHhhccccCchhhhhhhHHHHHhhhhhhhHHHHHHHhhc-----cchhHHHHHH
Q 039541 408 GDEQEVLQIGLELASFFSACVAFNVLLVFGTELFTTCVRNSTTSLVRQAVNLGAAFSPVLISAGR-----QNEFLSFGVF 482 (521)
Q Consensus 408 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~~~-----~~~~~~~~~~ 482 (521)
+....+...+++.+.....+...+-.+.-..+..|+ +-+..+|+.+....+.++++|.+.+... ..+...|++.
T Consensus 354 ~~~~~~~a~~~l~~~~~~~g~~~~Gf~~~~~~~apq-~a~~l~g~~~~~~~~~~~~~P~~vg~~~~~~t~~eW~~VF~i~ 432 (466)
T KOG2532|consen 354 SDEHRLLAVILLTIAIGLSGFNISGFYKNHQDIAPQ-HAGFVMGIINFVGALAGFIAPLLVGIIVTDNTREEWRIVFLIA 432 (466)
T ss_pred CCCcchHHHHHHHHHHHHcccchhhhHhhhhhccch-HHHHHHHHHHHHHHHHHHHHHHheeeEeCCCCHHHHHHHHHHH
Confidence 654332333333332222233333333333333554 5599999999999999999999998632 2466778888
Q ss_pred HHHHHHHhHhhhcc
Q 039541 483 GLVVFCFGFFVVFL 496 (521)
Q Consensus 483 ~~~~~~~~~~~~~~ 496 (521)
+++.+++.+.+.+.
T Consensus 433 a~i~~~~~i~f~~f 446 (466)
T KOG2532|consen 433 AGILIVGNIIFLFF 446 (466)
T ss_pred HHHHHHhchheeEe
Confidence 88888777665554
No 56
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.97 E-value=4.7e-29 Score=246.89 Aligned_cols=348 Identities=16% Similarity=0.101 Sum_probs=253.0
Q ss_pred CcceeeecceeeCCc-cccchhhHHHHHHHHHHhhhhhhhccccCCCCchHHHHHHHHHHHHHHHHHhccccHHHHHHHH
Q 039541 101 DTTIISDWSLECAGS-SILSGLPSSCFFIGCLLGGLALSTLGDSSSLGRKKLLFLSCFAMSITALATIFANNIWIYSTIR 179 (521)
Q Consensus 101 ~~~i~~~~~~~~~~~-~~~~~~~~s~~~lg~~i~~~~~g~l~dr~~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r 179 (521)
+|.+.+++|++..+. ..+.|++.+++.++..++++++|+++|| +|||++++.+.++.+++.++.+++++++.+++.|
T Consensus 37 l~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr--~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (408)
T PRK09874 37 LPLYVEQLGVTGHSALNMWSGLVFSITFLFSAIASPFWGGLADR--KGRKIMLLRSALGMGIVMVLMGLAQNIWQFLILR 114 (408)
T ss_pred HHHHHHHhCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhh--hCcHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHH
Confidence 788888999886553 1234889999999999999999999999 9999999999999999999999999999999999
Q ss_pred HHhhccchhhHhhhhhheeeeecCcchhHHHHHHHHHHHHHHHHHHHH-HHhhcCCchhHHHHHHHHHHHHHHhhhceee
Q 039541 180 FVAGFFRAPIMTSVIVLLSEMVSKRWRGQVVIIGFTFFSFGLVSLPAV-AYLSRGSSWKMLYVWTSIPSIVCCIIIYPFI 258 (521)
Q Consensus 180 ~l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~i~~~i-~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~~ 258 (521)
++.|++.+ ..+....++.|++|+++|++++++...+..+|.+++|.+ +.+.+..+||+.|++.+++.++..+..++++
T Consensus 115 ~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (408)
T PRK09874 115 ALLGLLGG-FVPNANALIATQVPRNKSGWALGTLSTGGVSGALLGPLAGGLLADSYGLRPVFFITASVLFLCFLVTLFCI 193 (408)
T ss_pred HHHHHhhh-hHHhHHHHHHHhcCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999865 567777888999999999999999999999999999988 6666778999999999888777765556666
Q ss_pred ecchhHHHhcCCHHHHHHHHHHHhhhcCCCCCCCccccccCCCCCccccCCCcccccccHHHHhccHHHHHHHHHH-HHH
Q 039541 259 SESPRWLFIHGHEAEAMAVLKRLASRSNYQSDYGLESCCLSNMPPKAKNVIPKLDLYSSLKDLFNRKWALRRLLTI-MAL 337 (521)
Q Consensus 259 ~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~ 337 (521)
||+++.. +.++ +... .+..+.+++++.+...... ...
T Consensus 194 ~~~~~~~----~~~~-~~~~-------------------------------------~~~~~~~~~~~~~~~~~~~~~~~ 231 (408)
T PRK09874 194 RENFQPV----SKKE-MLHM-------------------------------------REVVTSLKNPKLVLSLFVTTLII 231 (408)
T ss_pred ccCcccc----cchh-hhHH-------------------------------------HHHHHhCcCCchHHHHHHHHHHH
Confidence 6653210 0000 0000 0122344555443322222 222
Q ss_pred HHHHHHHHHhHHhhccCCCcc----H---HHHHHHHHHHhHhHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHhcCCc
Q 039541 338 AFGIGVVYFGLLLGVGNLSFN----I---YLSLAFNGLLDIPAYLLTFILIERWSRKSSILTFCILSGTCSAICVAIGDE 410 (521)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~----~---~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~i~~~~~~~~~~~ 410 (521)
...........+.+..+.+.+ . .....+.+++.+++.+..|++.||++||+.+..+..+..+..+......+.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (408)
T PRK09874 232 QVATGSIAPILTLYVRELAGNVSNIAFISGMIASVPGVAALLSAPRLGKLGDRIGPEKILITALIFSVLLLIPMSFVQTP 311 (408)
T ss_pred HHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHHHhccH
Confidence 222221111222222221111 1 112233456667788889999999999999888887777666655544322
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhccccCchhhhhhhHHHHHhhhhhhhHHHHHHHhh--ccchhHHHHHHHHHHHH
Q 039541 411 QEVLQIGLELASFFSACVAFNVLLVFGTELFTTCVRNSTTSLVRQAVNLGAAFSPVLISAG--RQNEFLSFGVFGLVVFC 488 (521)
Q Consensus 411 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~~--~~~~~~~~~~~~~~~~~ 488 (521)
+...+..++.+++.+...+...+...+..|++.+++.+++.+....+|..++|.+.|.. ..++...|.+.+++.++
T Consensus 312 --~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~gp~~~G~l~~~~g~~~~f~~~~~~~l~ 389 (408)
T PRK09874 312 --LQLGILRFLLGAADGALLPAVQTLLVYNSSNQIAGRIFSYNQSFRDIGNVTGPLMGAAISANYGFRAVFLVTAGVVLF 389 (408)
T ss_pred --HHHHHHHHHHHhhhHhhHHHHHHHHHHhCCcccceeeehHHHHHHHHHHHhhHHHHHHHHhhcchhHHHHHHHHHHHH
Confidence 45556667778888888888888888999999999999999999999999999999863 34677788888877777
Q ss_pred HhHhhhc
Q 039541 489 FGFFVVF 495 (521)
Q Consensus 489 ~~~~~~~ 495 (521)
+.+..+.
T Consensus 390 ~~~~~~~ 396 (408)
T PRK09874 390 NAVYSWN 396 (408)
T ss_pred HHHHHHH
Confidence 6665543
No 57
>PRK11043 putative transporter; Provisional
Probab=99.97 E-value=1.5e-28 Score=242.35 Aligned_cols=319 Identities=13% Similarity=0.096 Sum_probs=236.7
Q ss_pred CcceeeecceeeCCccccchhhHHHHHHHHHHhhhhhhhccccCCCCchHHHHHHHHHHHHHHHHHhccccHHHHHHHHH
Q 039541 101 DTTIISDWSLECAGSSILSGLPSSCFFIGCLLGGLALSTLGDSSSLGRKKLLFLSCFAMSITALATIFANNIWIYSTIRF 180 (521)
Q Consensus 101 ~~~i~~~~~~~~~~~~~~~~~~~s~~~lg~~i~~~~~g~l~dr~~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~ 180 (521)
+|.+++++|.+.++. +++.+++.++..++++++|+++|| +|||+++..+.++.+++.++++++++++.+++.|+
T Consensus 29 ~~~i~~~~~~s~~~~----g~~~s~~~~~~~~~~~~~g~l~dr--~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 102 (401)
T PRK11043 29 FKAIQADLQTSASAV----SASLSLFLAGFALGQLLWGPLSDR--YGRKPVLLAGLSLFALGSLGMLWVESAAQLLVLRF 102 (401)
T ss_pred HHHHHHHHCCCHHHH----HHHHHHHHHHHHHHHHhhhhHHhh--cCCcHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHH
Confidence 788999999999776 999999999999999999999999 99999999999999999999999999999999999
Q ss_pred HhhccchhhHhhhhhheeeeecCcchhHHHHHHHHHHHHHHHHHHHH-HHhhcCCchhHHHHHHHHHHHHHHhhhceeee
Q 039541 181 VAGFFRAPIMTSVIVLLSEMVSKRWRGQVVIIGFTFFSFGLVSLPAV-AYLSRGSSWKMLYVWTSIPSIVCCIIIYPFIS 259 (521)
Q Consensus 181 l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~i~~~i-~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~~~ 259 (521)
++|++.+...+...+++.|++|++++++..+.......+|..++|.+ +.+.+..+||+.|++.+++.++..++ .++++
T Consensus 103 l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~-~~~~~ 181 (401)
T PRK11043 103 VQAVGVCSAAVIWQALVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWLLNHFGWQAIFATLFAITLLLILP-TLRLK 181 (401)
T ss_pred HHHhhhHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHH-HHHcC
Confidence 99999988888888899999999999999999998899999999988 67777889999999988887777633 34445
Q ss_pred cchhHHHhcCCHHHHHHHHHHHhhhcCCCCCCCccccccCCCCCccccCCCcccccccHHHHhccHHHHHHHHHHHHHHH
Q 039541 260 ESPRWLFIHGHEAEAMAVLKRLASRSNYQSDYGLESCCLSNMPPKAKNVIPKLDLYSSLKDLFNRKWALRRLLTIMALAF 339 (521)
Q Consensus 260 esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 339 (521)
|+++. .+.++ .+.+++++++++.++...+.......
T Consensus 182 ~~~~~----~~~~~----------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (401)
T PRK11043 182 PSKKA----RKQSQ----------------------------------------DALTFKQLLKSKTYLGNVLIFAACSA 217 (401)
T ss_pred CCCCc----cccch----------------------------------------HHHHHHHHHcChhHHHHHHHHHHHHH
Confidence 43310 00000 01256677888876654443333322
Q ss_pred HHHHHHHhHHhhccCCCccHHHHH---HHHHHHhHhHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHH---HhcCCchHH
Q 039541 340 GIGVVYFGLLLGVGNLSFNIYLSL---AFNGLLDIPAYLLTFILIERWSRKSSILTFCILSGTCSAIC---VAIGDEQEV 413 (521)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~i~~~~~---~~~~~~~~~ 413 (521)
.........|.+.++.+.+..... ....++.++|.++.+++.||+++|+.........+++.+.+ ........+
T Consensus 218 ~~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~~~g~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (401)
T PRK11043 218 AFFAWLTGSPFILEQMGYSPADIGLSYVPQTIAFLVGGYGCRAALQKWGGEQLLPWLLVLFAVSVIAIWLASLLSHPSLV 297 (401)
T ss_pred HHHHHHHHhHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHhccCcHH
Confidence 222223334555666666554333 33345677888889999999999887655544444433322 221222223
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccccCchhhhhhhHHHHHhhhhhhhHHHHHHHhh
Q 039541 414 LQIGLELASFFSACVAFNVLLVFGTELFTTCVRNSTTSLVRQAVNLGAAFSPVLISAG 471 (521)
Q Consensus 414 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~~ 471 (521)
...+...+.+++.+..++.......+..|+ .++++.|+.+.....++..++.+.+..
T Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~g~~~~~~~~~~~~~~~~~g~l 354 (401)
T PRK11043 298 PLLIPFCVMAAANGAIYPIVVAQALRPFPQ-ATGKAAALQNTLQLGLCFLASLLVSAL 354 (401)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhCcc-cChHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 344455667777788888888877777764 689999999999888888888888753
No 58
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.97 E-value=1.1e-28 Score=242.69 Aligned_cols=349 Identities=12% Similarity=0.010 Sum_probs=239.6
Q ss_pred cceeeecceeeCCccccchhhHHHHHHHHHHhhhhhhhccccCCCCchHHHHHHHHHHHHHHHHHh---c-cccHHHHHH
Q 039541 102 TTIISDWSLECAGSSILSGLPSSCFFIGCLLGGLALSTLGDSSSLGRKKLLFLSCFAMSITALATI---F-ANNIWIYST 177 (521)
Q Consensus 102 ~~i~~~~~~~~~~~~~~~~~~~s~~~lg~~i~~~~~g~l~dr~~~Grr~~l~~~~~~~~~~~~~~~---~-~~~~~~l~~ 177 (521)
+.+.+++|++.++. |++.+.+.++..+++++.|+++|| +|||+++..+.++.+++.+++. + .++++.+++
T Consensus 37 ~~~~~~~g~s~~~~----g~~~~~~~~~~~i~~~~~g~l~dr--~g~k~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 110 (402)
T TIGR00897 37 SPFLKALGLSPQQS----ASAFTLYGIAAAISAWISGVVAEI--IGPLKTMMIGLLLWCVGHAAFIVFGLGHANYPLILL 110 (402)
T ss_pred HHHHHHhCCCHHHh----HHHHHHHHHHHHHHHHHHHHHHHH--cCcHHHHHHHHHHHHHHHHHHHHHhccCccHHHHHH
Confidence 44557899999777 999999999999999999999999 9999999999999998877653 3 358889999
Q ss_pred HHHHhhccchhhHhhhhhheeeeecCcchhHHHHHHHHHHHHHH-HHHHHH-HHhhcCCchhHHHHHHHHHHHHHHhhhc
Q 039541 178 IRFVAGFFRAPIMTSVIVLLSEMVSKRWRGQVVIIGFTFFSFGL-VSLPAV-AYLSRGSSWKMLYVWTSIPSIVCCIIIY 255 (521)
Q Consensus 178 ~r~l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~-~i~~~i-~~~~~~~~wr~~f~~~~~~~~~~~~~~~ 255 (521)
.|++.|++.+...+...+++.+++|+++|++++|+.+.+.++|. +++|.+ +.+.+..||+..++......++..++..
T Consensus 111 ~~~i~G~g~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~ 190 (402)
T TIGR00897 111 FYGIRGLGYPLFAYSFLVWVVYNTKQDNLSSAVGWFWAVYSIGIGVFGSYYSSYAIPAFGEMNTLWSALAFVLTGGVIAL 190 (402)
T ss_pred HHHHHHcchHHHHhHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHH
Confidence 99999999988888888889999999999999999999999997 578888 5777778876665554443333332333
Q ss_pred eeeecchhHHHhcCCHHHHHHHHHHHhhhcCCCCCCCccccccCCCCCccccCCCcccccccHHHHhccHHHHHHHHHHH
Q 039541 256 PFISESPRWLFIHGHEAEAMAVLKRLASRSNYQSDYGLESCCLSNMPPKAKNVIPKLDLYSSLKDLFNRKWALRRLLTIM 335 (521)
Q Consensus 256 ~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 335 (521)
++.++.++.. .+++.+ +..+....++.++++|.++...+..+
T Consensus 191 ~~~~~~~~~~-~~~~~~-------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (402)
T TIGR00897 191 FSNKDIFTPQ-HMQTRE-------------------------------------KFSELGKAATILFTNPNVLLGGMVRI 232 (402)
T ss_pred hccCCCCCcc-cccCCc-------------------------------------chhhHHHHHHHHHcChhHHHHHHHHH
Confidence 3444432100 000000 00000124567888888766555444
Q ss_pred HHHHHHHHHHHhHHhhccCCCccHHHHH---HHHHHHhHhHHHHHHHHHhhcCCchHHH-HHHHHHHHHHHHHHhcC---
Q 039541 336 ALAFGIGVVYFGLLLGVGNLSFNIYLSL---AFNGLLDIPAYLLTFILIERWSRKSSIL-TFCILSGTCSAICVAIG--- 408 (521)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~g~l~dr~g~~~~~~-~~~~~~~i~~~~~~~~~--- 408 (521)
..........+..|.+.++.+.+..... ....++.+++.++.|+++||++||+... .+....+++.+.+...+
T Consensus 233 ~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~l~~~~~~~~l~~~~~~~ 312 (402)
T TIGR00897 233 INTIGLFGFAVFLPMFVAELGFSTSEWLQIWGTFFFTNIVFNVIFGIVGDKLGWMNTVRWFGGVGCGIFTLALYYIPQHF 312 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 4444443344455666677776554332 3455778899999999999999888654 23333333332322211
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHhhccccCchhhhhhhHHHHHhhhhhhhHHHHHHHh--hccchhHHHHHHHHHH
Q 039541 409 DEQEVLQIGLELASFFSACVAFNVLLVFGTELFTTCVRNSTTSLVRQAVNLGAAFSPVLISA--GRQNEFLSFGVFGLVV 486 (521)
Q Consensus 409 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~--~~~~~~~~~~~~~~~~ 486 (521)
..+.+...+..++.+++.+...+. .....|..| ++|+++.|+.+....+|+.++|.+.+. ...++...+.+.+++.
T Consensus 313 ~~~~~~~~~~~~~~G~~~~~~~~~-~~~~~~~~~-~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~g~~~~~~~~a~~~ 390 (402)
T TIGR00897 313 GHSFAVALIIAIALGIFLAGYVPL-AAVFPTLAP-KHKGAAMSVLNLSAGLSAFLAPAIAVLFIGFFGAIGVVWIFAALY 390 (402)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHH-HHHHHhhCc-chhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHH
Confidence 112234445566666666654443 445566655 579999999999999999999999986 3345667777777777
Q ss_pred HHHhHhhhcc
Q 039541 487 FCFGFFVVFL 496 (521)
Q Consensus 487 ~~~~~~~~~~ 496 (521)
+++.+...++
T Consensus 391 ~i~~~~~~~~ 400 (402)
T TIGR00897 391 VVSAFLTAFI 400 (402)
T ss_pred HHHHHHHHHh
Confidence 7766665554
No 59
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.97 E-value=2.6e-29 Score=245.95 Aligned_cols=351 Identities=15% Similarity=0.145 Sum_probs=243.7
Q ss_pred CCCcceeeecceeeCCccccchhhHHHHHHHHHHhhhhhhhccccCCCCchHHHHHHHHHHHHHHHHHhccccHHHHHHH
Q 039541 99 PSDTTIISDWSLECAGSSILSGLPSSCFFIGCLLGGLALSTLGDSSSLGRKKLLFLSCFAMSITALATIFANNIWIYSTI 178 (521)
Q Consensus 99 ~~~~~i~~~~~~~~~~~~~~~~~~~s~~~lg~~i~~~~~g~l~dr~~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~ 178 (521)
|.+|.+.+++|++.++. +++.+++.++..++++++|+++|| +|||+++..+.++.+++.+++.++++++.+++.
T Consensus 12 p~~~~~~~~~~~s~~~~----~~~~~~~~~~~~~~~~~~g~l~d~--~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 85 (377)
T PRK11102 12 PALPVIAADFGVSAGSV----QMTLSAYILGFAIGQLFYGPMADS--FGRKPVILGGTLVFALAAVACALAQTIDQLIYM 85 (377)
T ss_pred ccHHHHHHHhCCCHHHH----HHHHHHHHHHHHHHHHhhchHHhh--cCChHHHHHHHHHHHHHHHHHHHHccHHHHHHH
Confidence 44899999999999777 999999999999999999999999 999999999999999999999999999999999
Q ss_pred HHHhhccchhhHhhhhhheeeeecCcchhHHHHHHHHHHHHHHHHHHHH-HHhhcCCchhHHHHHHHHHHHHHHhhhcee
Q 039541 179 RFVAGFFRAPIMTSVIVLLSEMVSKRWRGQVVIIGFTFFSFGLVSLPAV-AYLSRGSSWKMLYVWTSIPSIVCCIIIYPF 257 (521)
Q Consensus 179 r~l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~i~~~i-~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~ 257 (521)
|++.|++.+...+...+++.|++|+++|++++++.+.+..+|..++|.+ +.+.+..+||+.|++.+++.++..++..++
T Consensus 86 ~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (377)
T PRK11102 86 RFLHGLAAAAASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLVWFSWHAIFWVLALAAILAAALVFFF 165 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999999999999999998 567777899999999888887776566666
Q ss_pred eecchhHHHhcCCHHHHHHHHHHHhhhcCCCCCCCccccccCCCCCccccCCCcccccccHHHHhccHHHHHHHHHHHHH
Q 039541 258 ISESPRWLFIHGHEAEAMAVLKRLASRSNYQSDYGLESCCLSNMPPKAKNVIPKLDLYSSLKDLFNRKWALRRLLTIMAL 337 (521)
Q Consensus 258 ~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 337 (521)
+||+++.. +.++ .+.++...+++++++++..+...+...+.
T Consensus 166 ~~~~~~~~----~~~~-----------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (377)
T PRK11102 166 IPETLPKE----RRQP-----------------------------------FHLRTTIRNFASLFRHKRVLGYMLASGFS 206 (377)
T ss_pred CCccCccc----ccCC-----------------------------------CChHHHHHHHHHHHcChHHHHHHHHHHHH
Confidence 77754210 0000 00000012456778887765544443333
Q ss_pred HHHHHHHHHhHH-hhccCCCccHH---HHHHHHHHHhHhHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHhcC--Cch
Q 039541 338 AFGIGVVYFGLL-LGVGNLSFNIY---LSLAFNGLLDIPAYLLTFILIERWSRKSSILTFCILSGTCSAICVAIG--DEQ 411 (521)
Q Consensus 338 ~~~~~~~~~~~~-~~~~~~~~~~~---~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~i~~~~~~~~~--~~~ 411 (521)
...........| ++.+..+.+.. .......++.+++.++.+++.||+|+|+.+..+..+..+..+.+.... ...
T Consensus 207 ~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (377)
T PRK11102 207 FAGMFSFLTAGPFVYIELNGVSPQNFGYYFALNIVFLFVMTIINSRFVRRVGALNMLRFGLWIQFIMGIWLVVSALLDLG 286 (377)
T ss_pred HHHHHHHHHcCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 322222222222 33343454443 333455677788999999999999999988887765444333222211 111
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhccccCchhhhhhhHHHHHhh-hhhhhHHHHHHHhhccchhHHHHHHHHHHHHHh
Q 039541 412 EVLQIGLELASFFSACVAFNVLLVFGTELFTTCVRNSTTSLVRQAV-NLGAAFSPVLISAGRQNEFLSFGVFGLVVFCFG 490 (521)
Q Consensus 412 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~-~~g~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 490 (521)
.+...+...+...+.+...+.......|..| +.++++.++.+... .+|..+++++.+....+....+...+++.+++.
T Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 365 (377)
T PRK11102 287 FWALVVGVAAFVGCVSMISSNAMAVILDEFP-HMAGTASSLAGTLRFGIGAIVGALLSLAPFTSAWPMVWSMAFCSILSI 365 (377)
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHhcccc-ccchHHHHHHHHHHHHHHHHHHHHHHhccCCChHHHHHHHHHHHHHHH
Confidence 1223333333344444445555566777776 67899999887764 466777777765443333333344444444443
Q ss_pred Hhhhc
Q 039541 491 FFVVF 495 (521)
Q Consensus 491 ~~~~~ 495 (521)
+..++
T Consensus 366 ~~~~~ 370 (377)
T PRK11102 366 LFYLY 370 (377)
T ss_pred HHHHH
Confidence 33333
No 60
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.97 E-value=1.1e-28 Score=242.59 Aligned_cols=322 Identities=13% Similarity=0.099 Sum_probs=234.8
Q ss_pred CcceeeecceeeCCccccchhhHHHHHHHHHHhhhhhhhccccCCCCchHHHHHHHHHHHHHHHHHhccccHHHHHHHHH
Q 039541 101 DTTIISDWSLECAGSSILSGLPSSCFFIGCLLGGLALSTLGDSSSLGRKKLLFLSCFAMSITALATIFANNIWIYSTIRF 180 (521)
Q Consensus 101 ~~~i~~~~~~~~~~~~~~~~~~~s~~~lg~~i~~~~~g~l~dr~~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~ 180 (521)
+|.+.+++|++.++. +++.+.+.++..++++++|+++|| +|||++++++.++..++.+++.++++++.+++.|+
T Consensus 31 ~~~i~~~~~~s~~~~----~~~~~~~~~~~~~~~~~~G~l~Dr--~grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 104 (394)
T PRK11652 31 IADMARDLNVREGAV----QAVMAAYLLTYGLSQLFYGPLSDR--VGRRPVILVGMSIFILGTLVALFAHSLTVLIAASA 104 (394)
T ss_pred HHHHHHHhCCCHHHH----HHHHHHHHHHHHHHHHhhhhHHHh--cCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHH
Confidence 789999999999776 999999999999999999999999 99999999999999999999999999999999999
Q ss_pred HhhccchhhHhhhhhheeeeecCcchhHHHHHHHHHHHHHHHHHHHH-HHhhcCCchhHHHHHHHHHHHHHHhhhceeee
Q 039541 181 VAGFFRAPIMTSVIVLLSEMVSKRWRGQVVIIGFTFFSFGLVSLPAV-AYLSRGSSWKMLYVWTSIPSIVCCIIIYPFIS 259 (521)
Q Consensus 181 l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~i~~~i-~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~~~ 259 (521)
+.|++.+...+....+..|.+++++|+++.++.+.+..+|..++|.+ +.+.+..+||+.|++.++..++..++..+++|
T Consensus 105 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~ 184 (394)
T PRK11652 105 IQGLGTGVGGVMARTLPRDLYEGTQLRHANSLLNMGILVSPLLAPLIGGLLTTLFGWRACYLFLLLLGAGVTFSMARWMP 184 (394)
T ss_pred HHHhhhhHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHHHHHHHhCC
Confidence 99999998888888899999999999999999999999999999998 56667789999999988877766545556677
Q ss_pred cchhHHHhcCCHHHHHHHHHHHhhhcCCCCCCCccccccCCCCCccccCCCcccccccHHHHhccHHHHHHHHHHHHHHH
Q 039541 260 ESPRWLFIHGHEAEAMAVLKRLASRSNYQSDYGLESCCLSNMPPKAKNVIPKLDLYSSLKDLFNRKWALRRLLTIMALAF 339 (521)
Q Consensus 260 esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 339 (521)
|+++.. ++.++ ....++.++++|.++...+..+....
T Consensus 185 ~~~~~~---~~~~~----------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (394)
T PRK11652 185 ETRPAD---ARRTR----------------------------------------VLASYRTLLSNRRFNCYLLMLIGTLA 221 (394)
T ss_pred ccCccc---cchhH----------------------------------------HHHHHHHHHcChHHHHHHHHHHHHHH
Confidence 764210 00000 01256677888876655444333333
Q ss_pred HHHHHHHhHHhhccC-CCccHHHHH---HHHHHHhHhHHHHHHHHHhhcCCchHHHHHHHHHH-HHHHHHHhcCCchHHH
Q 039541 340 GIGVVYFGLLLGVGN-LSFNIYLSL---AFNGLLDIPAYLLTFILIERWSRKSSILTFCILSG-TCSAICVAIGDEQEVL 414 (521)
Q Consensus 340 ~~~~~~~~~~~~~~~-~~~~~~~~~---~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~-i~~~~~~~~~~~~~~~ 414 (521)
.........+.+.++ .+.+..... ....++.+++.++.+++.||++++........+.. +.............+.
T Consensus 222 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (394)
T PRK11652 222 GIAVFEACSGVLMGAVLGLSSMTVSILFILPIPAAFFGAWFAGRPNKRFSTLMWQSVICCLLAGLLMWIPGWFGVMNVWT 301 (394)
T ss_pred HHHHHHHhChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHH
Confidence 333333233333433 555543333 23345566677777788888773332222222222 2222222211222245
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccccCchhhhhhhHHHHHhhhhhhhHHHHHHHhhc
Q 039541 415 QIGLELASFFSACVAFNVLLVFGTELFTTCVRNSTTSLVRQAVNLGAAFSPVLISAGR 472 (521)
Q Consensus 415 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~~~ 472 (521)
.....++.+++.+...+....+..|.+|+ .++++.++.+....+|+.+++.+.+...
T Consensus 302 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~lg~~~~~~~~~~~~ 358 (394)
T PRK11652 302 LLVPAALFFFGAGMLFPLATSGAMEPFPY-LAGTAGALLGGLQNIGSGLAALLSAMLP 358 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhccc-cchHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 55666777888888889999989998874 6799999999999999999999988743
No 61
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=99.97 E-value=1.5e-31 Score=247.67 Aligned_cols=360 Identities=15% Similarity=0.151 Sum_probs=252.2
Q ss_pred CChhHHHHHHHHHHHHHHHHHHHhhhhccccCCcccccCCcccccCCccccccccCcceecCCCCcceeeecceeeCCcc
Q 039541 37 LGLPQFIQVILISLLLIFESQQTFISVYTDEEPTWHCINNTTTCSSSSDICTLSKSAWAWDRPSDTTIISDWSLECAGSS 116 (521)
Q Consensus 37 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~p~~~c~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 116 (521)
..+..++.++++++..+++..|.+.+..+ .+.+++.||+++++.
T Consensus 27 ~~~~~~~~l~il~~vnlmny~Dr~~iagv-----------------------------------~~~v~~~fni~~s~~- 70 (493)
T KOG1330|consen 27 SMKSPTLTLVILCLVNLMNYADRYTIAGV-----------------------------------LKEVQTYFNISDSEL- 70 (493)
T ss_pred ccccchHHHHHHHHHHHHHHhhhhhhhhh-----------------------------------hHHHHHhcCCCchhc-
Confidence 45667888899999999999999999999 999999999999777
Q ss_pred ccchhhHHHHHHHHHHhhhhhhhccccCCCCchHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHhhccchhhHhhhhhh
Q 039541 117 ILSGLPSSCFFIGCLLGGLALSTLGDSSSLGRKKLLFLSCFAMSITALATIFANNIWIYSTIRFVAGFFRAPIMTSVIVL 196 (521)
Q Consensus 117 ~~~~~~~s~~~lg~~i~~~~~g~l~dr~~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~ 196 (521)
|++.+.+.+.+.+++|++|+++|| |+||+++.+|..++.++.++++++..||++++.|.+.|+|.+...++.+++
T Consensus 71 ---Gll~~vf~v~~~i~sPl~gyLadr--yNR~~v~~vG~~iW~~Av~~~~fs~~Fwq~~l~R~~vGiGeAs~~~ia~s~ 145 (493)
T KOG1330|consen 71 ---GLLQTVFIVVFMIASPLFGYLADR--YNRKRVIAVGIFIWTLAVFASGFSNHFWQVLLCRGFVGIGEASYSPIAPSL 145 (493)
T ss_pred ---cchhHHHHHHHHHHHHHHHHHHhh--cCcceEEeeHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhhhcccchhH
Confidence 999999999999999999999999 999999999999999999999999999999999999999999999999999
Q ss_pred eeeeecCcchhHHHHHHHHHHHHHHHHHHHHHH-hhcCC-chhHHHHHHHHHHHHHHhhhceeeecchhHHHhcCCHHHH
Q 039541 197 LSEMVSKRWRGQVVIIGFTFFSFGLVSLPAVAY-LSRGS-SWKMLYVWTSIPSIVCCIIIYPFISESPRWLFIHGHEAEA 274 (521)
Q Consensus 197 i~~~~~~~~rg~~~~~~~~~~~~G~~i~~~i~~-~~~~~-~wr~~f~~~~~~~~~~~~~~~~~~~esp~~~~~~~~~~~~ 274 (521)
++|.+|.++|++++++++.+..+|..+|.++|. ..+.. .|||.|+..++++++..++.+++.+|+++- ..++.
T Consensus 146 IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va~~~~~Wr~af~~~avl~vi~~~L~~~f~~eP~rg-----a~~~~ 220 (493)
T KOG1330|consen 146 IADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVASLTFWWRWAFRGSAVLGVIVGLLVFLFVREPERG-----ARDEV 220 (493)
T ss_pred hhhcCcchhhhHHHHHhhhhcccccceeEEeeeeeccCccceEEEEEeehHHHHHHHHHHHhhccCcccc-----ccccc
Confidence 999999999999999999999999999988854 33333 499999999999999998888888887531 11110
Q ss_pred HHHHHHHhhhcCCCCCCCccccccCCCCCccccCCCcccccccHHHHhccHHHHHHHHHHHHHHHHHHHHHHhHH----h
Q 039541 275 MAVLKRLASRSNYQSDYGLESCCLSNMPPKAKNVIPKLDLYSSLKDLFNRKWALRRLLTIMALAFGIGVVYFGLL----L 350 (521)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~ 350 (521)
++. .+...+..+...+.+.+.+++.+....+......+..+...|..| +
T Consensus 221 -----------~~~----------------~~~~~~~ts~~kDl~~l~~~~v~v~~sl~~~a~~fv~Gs~sww~p~~~~~ 273 (493)
T KOG1330|consen 221 -----------DGE----------------NKMVKPFTSVWKDLKVLAKIKVFVLSSLGIIAAQFVIGSLSWWAPAFIYY 273 (493)
T ss_pred -----------ccC----------------CcCCCCccchHHHHHHHHccCceeeehHHHHHHHHhccccchhhhhHHHH
Confidence 000 000111112223555566656544444433333333322211111 1
Q ss_pred h--ccCCCc-cHHHHHHHHHHHhHhHHHHHHHHHhhcCCc----hHHH-------HHHHHHHHHHHHHHhcCCchHHHHH
Q 039541 351 G--VGNLSF-NIYLSLAFNGLLDIPAYLLTFILIERWSRK----SSIL-------TFCILSGTCSAICVAIGDEQEVLQI 416 (521)
Q Consensus 351 ~--~~~~~~-~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~----~~~~-------~~~~~~~i~~~~~~~~~~~~~~~~~ 416 (521)
+ +..... .....+.+...++.+|.+++|.++||+.|+ .... .+..+.+..+.+........ ....
T Consensus 274 ~~~~~~~~~~~~~ifg~vt~~~G~lGvl~Ggiisd~~~~~~~~~~~~~~~q~~~~~g~~~s~~~L~~~~~~~~~s-~~~~ 352 (493)
T KOG1330|consen 274 SYELIGFDHNATLIFGGVTCAGGSLGVLFGGIISDKLSRIFPNSGTLRASQLSAALGAPLSIPFLFLFPAFTSSS-MIFG 352 (493)
T ss_pred HHHHhCCccccchhhhhHHHhhchhhheehHHHHHHHHHhcccccchhHHHHHHhhhhhHHHHHHHHHHhhhhHH-HHHH
Confidence 1 111111 223444556677888889999999985321 1111 11122222222222222222 2222
Q ss_pred HHHHHHHHH-HHHHHHHHHHhhccccCchhhhhhhHHHHHhh-hhhhhHHHHHHHh
Q 039541 417 GLELASFFS-ACVAFNVLLVFGTELFTTCVRNSTTSLVRQAV-NLGAAFSPVLISA 470 (521)
Q Consensus 417 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~-~~g~~~~p~~~~~ 470 (521)
+.+++++.. ....++...-+..|..|++.|.++.++...+. .+|.+-+|++.|.
T Consensus 353 ~il~~~g~~~~~~~~a~n~~i~l~vV~p~~Rt~a~a~~~~~~h~fgd~~~p~ivGi 408 (493)
T KOG1330|consen 353 LILFLVGETISWFNWATNNPIFLEVVPPSRRTTAYALDTVFEHIFGDAASPYIVGI 408 (493)
T ss_pred HHHHHHHHHHHhcccccccceeeEecCcccccHHHHHHHHHHHHhccCCCcceehh
Confidence 233333332 23334566677889999999999999988776 4566667767664
No 62
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.97 E-value=8.9e-29 Score=242.09 Aligned_cols=343 Identities=10% Similarity=-0.027 Sum_probs=238.8
Q ss_pred CcceeeecceeeCCccccchhhHHHHHHHHHHhhhhhhhccccCCCCchHHHHHHHHHHHHHHHHHhccccHHHHHHHHH
Q 039541 101 DTTIISDWSLECAGSSILSGLPSSCFFIGCLLGGLALSTLGDSSSLGRKKLLFLSCFAMSITALATIFANNIWIYSTIRF 180 (521)
Q Consensus 101 ~~~i~~~~~~~~~~~~~~~~~~~s~~~lg~~i~~~~~g~l~dr~~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~ 180 (521)
.+.+.++++.+..+. +++.+.+.+++.+.++++|+++|| +|||++++++.++.++++++++++.+. ++.|+
T Consensus 26 ~~~~~~~~~~s~~~~----~~~~~~~~l~~~l~~~~~G~laDr--~grr~vl~~~~~~~~~~~~~~~~~~~~---~~~r~ 96 (393)
T PRK11195 26 AIALLKELHYPDWSQ----PLLQMFFVLAYIVLAPFVGAFADS--FPKGRVMFIANGIKLLGCLLMLFGIHP---LLAYG 96 (393)
T ss_pred HHHHHHHcCCcHHHH----HHHHHHHHHHHHHHHhhhhHhhhc--cCCchhhHHHHHHHHHHHHHHHHHHHH---HHHHH
Confidence 455667888877555 999999999999999999999999 999999999999999999888877664 78899
Q ss_pred HhhccchhhHhhhhhheeeeecCcchhHHHHHHHHHHHHHHHHHHHHH-HhhcCCchhHHHHHHHHHHHHHHhhhceeee
Q 039541 181 VAGFFRAPIMTSVIVLLSEMVSKRWRGQVVIIGFTFFSFGLVSLPAVA-YLSRGSSWKMLYVWTSIPSIVCCIIIYPFIS 259 (521)
Q Consensus 181 l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~i~~~i~-~~~~~~~wr~~f~~~~~~~~~~~~~~~~~~~ 259 (521)
++|++.+...|...+++.|++|+++|++++++.+....+|.++||.++ .+.+ ..|+..+.+.+...++.. +..+.+|
T Consensus 97 l~G~~~a~~~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l~~-~~~~~~~~i~~~~~~~~~-~~~~~l~ 174 (393)
T PRK11195 97 LVGIGAAAYSPAKYGILTELLPGEKLVKANGWMEGSTIAAILLGTVLGGALAD-PHAEAALAVCALIYLLAA-LFNLFIP 174 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHH-HHHhcCC
Confidence 999999999999999999999999999999999999999999999995 4444 458888877766555444 5556778
Q ss_pred cchhHHHhcCCHHHHHHHHHHHhhhcCCCCCCCccccccCCCCCccccCCCcccccccHHHHhccHHHHHHHHHHHHHHH
Q 039541 260 ESPRWLFIHGHEAEAMAVLKRLASRSNYQSDYGLESCCLSNMPPKAKNVIPKLDLYSSLKDLFNRKWALRRLLTIMALAF 339 (521)
Q Consensus 260 esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 339 (521)
|+|+... .+.++.....+.. .+.++.++++|.++.......+.+.
T Consensus 175 ~~~~~~~--~~~~~~~~~~~~~---------------------------------~~~~~~l~~~~~~~~~~~~~~~~~~ 219 (393)
T PRK11195 175 RLGARRP--GQSWNPIALLRDF---------------------------------FHACRVLWRDKLGRFSLAGTTLFWG 219 (393)
T ss_pred CCccccc--ccCCCHHHHHHHH---------------------------------HHHHHHHHhCchhHHHHHHHHHHHH
Confidence 7653210 0000000001111 0134567788776655544444444
Q ss_pred HHHHHHHhHHhhccC-CCccHHH---HHHHHHHHhHhHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHhcCCchHHHH
Q 039541 340 GIGVVYFGLLLGVGN-LSFNIYL---SLAFNGLLDIPAYLLTFILIERWSRKSSILTFCILSGTCSAICVAIGDEQEVLQ 415 (521)
Q Consensus 340 ~~~~~~~~~~~~~~~-~~~~~~~---~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 415 (521)
......+..+.+.++ .+.++.. .....+++.++++++.+++.||.++++.+..+.. .++..+.+.... +.+..
T Consensus 220 ~~~~~~~~~~~~~~~~lg~s~~~~G~~~~~~~~g~i~g~~~~~~l~~~~~~~~~~~~g~~-~~~~~~~~~~~~--~~~~~ 296 (393)
T PRK11195 220 AGATLRFLVLAWAPVALGITLNQPAYLQAVVAIGIAVGAGAAARLVTLETVLRVLPAGIL-MGLVVLLMALQH--SLLPA 296 (393)
T ss_pred HHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchHHHHHH-HHHHHHHHHHHh--HHHHH
Confidence 444444444444432 4444433 3345567788899999999999988887776643 333333333322 22444
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhccccCchh-hhhhhHHHHHhhhhhhhHHHHHHHhh-ccchhHHHHHHHHHHHHHhHh
Q 039541 416 IGLELASFFSACVAFNVLLVFGTELFTTCV-RNSTTSLVRQAVNLGAAFSPVLISAG-RQNEFLSFGVFGLVVFCFGFF 492 (521)
Q Consensus 416 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-r~~~~~~~~~~~~~g~~~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 492 (521)
.+..++.|++.+...+...+...+..|++. +|++.++.+....++..++..+.+.. ..+....+.+.+...++...+
T Consensus 297 ~~~~~~~G~~~g~~~~~~~~~~q~~~~~~~~~g~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 375 (393)
T PRK11195 297 YPLLILIGALGGFFVVPMNALLQHRGHVLVGAGHSIAVQNFNENLAMLLMLGLYSLLVKLGVPVVAVIVGFGLLVALAM 375 (393)
T ss_pred HHHHHHHHHhhhhhhhhHHHHHHhhCcccccchhHHHHHhHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHH
Confidence 556667777777777777777788766654 79999999999999999888887753 334444454444444444443
No 63
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.97 E-value=5.2e-29 Score=229.24 Aligned_cols=375 Identities=17% Similarity=0.097 Sum_probs=289.2
Q ss_pred CChhHHHHHHHHHHHHHHHHHHHhhhhccccCCcccccCCcccccCCccccccccCcceecCCCCcceeeecceeeCCcc
Q 039541 37 LGLPQFIQVILISLLLIFESQQTFISVYTDEEPTWHCINNTTTCSSSSDICTLSKSAWAWDRPSDTTIISDWSLECAGSS 116 (521)
Q Consensus 37 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~p~~~c~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 116 (521)
.++.+++.+.+..+......+.....+.+ .+.|.+++|+|++|.
T Consensus 8 ~k~~~~~~L~~S~~af~v~F~VW~l~s~l-----------------------------------~~~i~~~~~LS~~q~- 51 (417)
T COG2223 8 GKRIARRNLWLSTLAFDVGFMVWTLFSPL-----------------------------------GVFIKSDFGLSEGQK- 51 (417)
T ss_pred cccchhHHHHHHHHHHHHHHHHHHHHHHH-----------------------------------HhhhccccCCCHHHH-
Confidence 44556666777777777777777778888 788889999999888
Q ss_pred ccchhhHHHHHHHHHHhhhhhhhccccCCCCchHHHHHHHHHHHHHHHHHhcccc---HHHHHHHHHHhhccchhhHhhh
Q 039541 117 ILSGLPSSCFFIGCLLGGLALSTLGDSSSLGRKKLLFLSCFAMSITALATIFANN---IWIYSTIRFVAGFFRAPIMTSV 193 (521)
Q Consensus 117 ~~~~~~~s~~~lg~~i~~~~~g~l~dr~~~Grr~~l~~~~~~~~~~~~~~~~~~~---~~~l~~~r~l~G~~~g~~~~~~ 193 (521)
+++.++..+...+..++.|++.|| ||.|++..+++++..+-++..+++.+ ++++++.+++.|++.+ .+.+.
T Consensus 52 ---~ll~aiPil~GallRl~~g~l~dr--fGgR~~~~~s~~l~~IP~~~~~~a~~~~~~~~ll~~gll~G~~Ga-sFav~ 125 (417)
T COG2223 52 ---GLLVAIPILVGALLRLPYGFLTDR--FGGRKWTILSMLLLLIPCLGLAFAVTYPSTWQLLVIGLLLGLAGA-SFAVG 125 (417)
T ss_pred ---HHHHHHHHHHhHHHHHHHHhhhcc--cCchHHHHHHHHHHHHHHHHHHHHccCCchHHHHHHHHHHhcccc-eehcc
Confidence 999999999999999999999999 99999999999999999999999854 4599999999999965 88999
Q ss_pred hhheeeeecCcchhHHHHHHHHHHHHHHHHHHHHH-HhhcCCc---hhHHHHHHHHHHHHHHhhhceeeecchhHHHhcC
Q 039541 194 IVLLSEMVSKRWRGQVVIIGFTFFSFGLVSLPAVA-YLSRGSS---WKMLYVWTSIPSIVCCIIIYPFISESPRWLFIHG 269 (521)
Q Consensus 194 ~~~i~~~~~~~~rg~~~~~~~~~~~~G~~i~~~i~-~~~~~~~---wr~~f~~~~~~~~~~~~~~~~~~~esp~~~~~~~ 269 (521)
..++++++||+++|.++|+.. ..++|..+..+++ .+....+ ||....+..+..++..+..++.+.|.|+.....+
T Consensus 126 m~~~s~~fP~~~qG~AlGI~g-~GN~G~av~q~~~P~v~~~~g~~~w~~~~~i~~~~l~v~~v~~~~~~~d~p~~r~~~~ 204 (417)
T COG2223 126 MPNASFFFPKEKQGLALGIAG-AGNLGVAVAQLVAPLVAVAFGFLAWRNVAGIYVVALAIAAVLAWLGMNDVPEHRASVK 204 (417)
T ss_pred cccccccCChhhhhHHHHHhc-cccccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhcccc
Confidence 999999999999999999999 8888887766663 4444456 9999999998888888788888887764210000
Q ss_pred CHHHHHHHHHHHhhhcCCCCCCCccccccCCCCCccccCCCcccccccHHHHhccHHHHHHHHHHHHHHHHH-HHHHHhH
Q 039541 270 HEAEAMAVLKRLASRSNYQSDYGLESCCLSNMPPKAKNVIPKLDLYSSLKDLFNRKWALRRLLTIMALAFGI-GVVYFGL 348 (521)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 348 (521)
.. . ..+++.++++++.|...+......-+. .+..+..
T Consensus 205 -----------------~~---------------------~----~~~~~~v~~~~~~W~lsllY~~tFG~Fvgfs~~l~ 242 (417)
T COG2223 205 -----------------PQ---------------------L----PAQLKAVFSNKDTWLLSLLYFATFGGFVGFSAYLP 242 (417)
T ss_pred -----------------cc---------------------c----hhHHHHHhcCcchHHHHHHHHHHHHHHHHHHHHHH
Confidence 00 0 025677888888777666655444433 3334444
Q ss_pred HhhccCCCccHHHH---HHHHHHHhHhHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHhcCCc-----hHHHHHHHHH
Q 039541 349 LLGVGNLSFNIYLS---LAFNGLLDIPAYLLTFILIERWSRKSSILTFCILSGTCSAICVAIGDE-----QEVLQIGLEL 420 (521)
Q Consensus 349 ~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~i~~~~~~~~~~~-----~~~~~~~~~~ 420 (521)
.++..+++.+.... .....+.+.+.+.++|+++||+|.+|.+.+.+..++++..+....... +.+......+
T Consensus 243 ~~~~~~fg~~~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~Gg~rv~~~~f~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l 322 (417)
T COG2223 243 MYLVTQFGLSPVTAGLIAFLFPLIGALARPLGGWLSDRIGGRRVTLAVFVGMALAAALLSLFLTGFGHGGSFVVFVAVFL 322 (417)
T ss_pred HHHHHhcCCChhhHHHHHHHHHHHHHHHHhccchhhhhccchhHHHHHHHHHHHHHHHHHccccccccCcchHHHHHHHH
Confidence 45555667665443 344445566778899999999999999999999999888887776421 1245555566
Q ss_pred HHHHHHHHHHHHHHHhhccccCchhhhhhhHHHHHhhhhhhhHHHHHHHhh---ccchhHHHHHHHHHHHHHhHhhhccc
Q 039541 421 ASFFSACVAFNVLLVFGTELFTTCVRNSTTSLVRQAVNLGAAFSPVLISAG---RQNEFLSFGVFGLVVFCFGFFVVFLP 497 (521)
Q Consensus 421 ~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 497 (521)
..+++.+......+-+++..+|++. |.+.|+....+.+|++.-|...+.. ...+...|.++..+.+++.+....+.
T Consensus 323 ~l~~~~G~GnGsvfk~Ip~if~~~~-G~v~G~vga~G~lGGf~lp~~~g~~~~~tg~~~~~f~~~~~~~~~a~v~~~~~y 401 (417)
T COG2223 323 ALFVFAGLGNGSVFKMIPVIFPKET-GAVTGIVGAIGGLGGFFLPLAFGVSLDLTGSYTGAFMLLLAFYLVALVLTWALY 401 (417)
T ss_pred HHHHHhccCcchheeechHHHHhhh-hHHHHHHHHhccccccchhHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6777778888888888999998866 9999999999999999999998862 23467778888888777777655443
No 64
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.97 E-value=4.9e-28 Score=237.91 Aligned_cols=318 Identities=14% Similarity=0.096 Sum_probs=225.8
Q ss_pred CcceeeecceeeCCccccchhhHHHHHHHHHHhhhhhhhccccCCCCchHHHHHHHHHHHHHHHHHhccccHHHHHHHHH
Q 039541 101 DTTIISDWSLECAGSSILSGLPSSCFFIGCLLGGLALSTLGDSSSLGRKKLLFLSCFAMSITALATIFANNIWIYSTIRF 180 (521)
Q Consensus 101 ~~~i~~~~~~~~~~~~~~~~~~~s~~~lg~~i~~~~~g~l~dr~~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~ 180 (521)
+|.+.+++|.+.++. ++..+.+.++..+++++.|+++|| +|||++++.+.++.+++.+++.++++++.+++.|+
T Consensus 26 lp~~~~~~~~s~~~~----~~~~~~~~~~~~~~~~~~G~l~Dr--~g~r~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 99 (392)
T PRK10473 26 LPRIAADLNASEAQL----HIAFSVYLAGMAAAMLFAGKIADR--SGRKPVAIPGAALFIIASLLCSLAETSSLFLAGRF 99 (392)
T ss_pred HHHHHHHhCCCHHHH----HHHHHHHHHHHHHHHHhHhHHHHH--hCChHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHH
Confidence 789999999998666 999999999999999999999999 99999999999999999999999999999999999
Q ss_pred HhhccchhhHhhhhhheeeeecCcchhHHHHHHHHHHHHHHHHHHHHH-HhhcCCchhHHHHHHHHHHHHHHhhhceeee
Q 039541 181 VAGFFRAPIMTSVIVLLSEMVSKRWRGQVVIIGFTFFSFGLVSLPAVA-YLSRGSSWKMLYVWTSIPSIVCCIIIYPFIS 259 (521)
Q Consensus 181 l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~i~~~i~-~~~~~~~wr~~f~~~~~~~~~~~~~~~~~~~ 259 (521)
++|++.+...+...+++.|++|+++|+++.++.+....+|..++|.++ .+.+..+||+.|++.++..++..++..+.+|
T Consensus 100 l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~~~~g~~~~~~~~~~~~~i~~~~~~~~~~ 179 (392)
T PRK10473 100 LQGIGAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIMLKFPWQSLFYTMAAMGILVLLLSLFILK 179 (392)
T ss_pred HHHhhhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHHHHHHHHHHHHHHHHHHHHcC
Confidence 999999999999999999999999999999999999999999999984 5556789999999998887777756666677
Q ss_pred cchhHHHhcCCHHHHHHHHHHHhhhcCCCCCCCccccccCCCCCccccCCCcccccccHHHHhccHHHHHHHHHHHHHHH
Q 039541 260 ESPRWLFIHGHEAEAMAVLKRLASRSNYQSDYGLESCCLSNMPPKAKNVIPKLDLYSSLKDLFNRKWALRRLLTIMALAF 339 (521)
Q Consensus 260 esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 339 (521)
|+++.. .+.+ .+.....++.++++.++...+...+...
T Consensus 180 ~~~~~~---~~~~---------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (392)
T PRK10473 180 ETRPAR---APAA---------------------------------------SSKPRENSESLLNRFFLSRLVITTLSVT 217 (392)
T ss_pred CCCCcc---cCCc---------------------------------------cchHHHHHHHHhCHHHHHHHHHHHHHHH
Confidence 753210 0000 0000134456777776554444333333
Q ss_pred HHHHHHHhHHhh-ccCCCccHHH---HHHHHHHHhHhHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHhcCCchHHHH
Q 039541 340 GIGVVYFGLLLG-VGNLSFNIYL---SLAFNGLLDIPAYLLTFILIERWSRKSSILTFCILSGTCSAICVAIGDEQEVLQ 415 (521)
Q Consensus 340 ~~~~~~~~~~~~-~~~~~~~~~~---~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 415 (521)
.........|.+ .++.+.+... .....++..+++.++.+++.||+|||+.+..+..+..++.+.+.+.... +..
T Consensus 218 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 295 (392)
T PRK10473 218 VILTFVNTSPVLLMEQMGFSRGEYAIIMALTAGVSMTVSFSTPFALGIFKPRTLMLTSQVLFLAAGITLALSPSH--AVS 295 (392)
T ss_pred HHHHHHHhCHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHH--HHH
Confidence 222222222333 3344554433 3344567778899999999999999999988888777777666654333 223
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhccccCchhh-hhhhHHHHHhhhhhhhHHHHHHHh
Q 039541 416 IGLELASFFSACVAFNVLLVFGTELFTTCVR-NSTTSLVRQAVNLGAAFSPVLISA 470 (521)
Q Consensus 416 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r-~~~~~~~~~~~~~g~~~~p~~~~~ 470 (521)
.....+.+.+.+..++.... .+..|.+.| +.+.++......+|..+++.+.+.
T Consensus 296 ~~~~~l~~~g~~~~~~~~~~--~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~l~~~ 349 (392)
T PRK10473 296 LFGITLICAGFSVGFGVAMS--QALGPFSLRAGVASSTLGIAQVCGSSLWIWLAAV 349 (392)
T ss_pred HHHHHHHHHHHHHHhHHHHH--HHhccCcccccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33333434444444333322 333443333 445555555555666666666654
No 65
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.97 E-value=1.7e-28 Score=239.68 Aligned_cols=367 Identities=17% Similarity=0.178 Sum_probs=265.3
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhhhccccCCcccccCCcccccCCccccccccCcceecCCCCcceeeecceeeCCcccc
Q 039541 39 LPQFIQVILISLLLIFESQQTFISVYTDEEPTWHCINNTTTCSSSSDICTLSKSAWAWDRPSDTTIISDWSLECAGSSIL 118 (521)
Q Consensus 39 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~p~~~c~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 118 (521)
|...+++..+++.++....+...++.. .+-.+.+|.+...++.
T Consensus 41 K~dl~i~~~~~~~y~~~~~d~~si~~a----------------------------------~l~g~~edl~~~~~~l--- 83 (495)
T KOG2533|consen 41 KLDLFILPFLCYLYFHAYLDKSSIVNA----------------------------------SLSGLKEDLKLVGNQL--- 83 (495)
T ss_pred HHHHHHHHHHHHHHHHHhcchhcchhH----------------------------------HHcCCccccchhhhhh---
Confidence 344555666677777777777666554 1344678989888777
Q ss_pred chhhHHHHHHHHHHhhhhhhhccccCCCCchHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHhhccchhhHhhhhhhee
Q 039541 119 SGLPSSCFFIGCLLGGLALSTLGDSSSLGRKKLLFLSCFAMSITALATIFANNIWIYSTIRFVAGFFRAPIMTSVIVLLS 198 (521)
Q Consensus 119 ~~~~~s~~~lg~~i~~~~~g~l~dr~~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~ 198 (521)
+.+.++++++++++++++|.+.|| ++-.+.+....+++++..++....+|++.+++.|++.|+..+..+|....+++
T Consensus 84 -~~~~t~F~v~Yii~~~p~~~L~~r--~~ls~~l~~~~~~w~~~~~~~~~~~s~~~~ialr~llGl~es~~wP~~~~~lg 160 (495)
T KOG2533|consen 84 -GVLDTVFYVGYIIGQFPSGLLGDR--FPLSKGLSVSGILWGLFGFLTAAVHSFPGLIALRFLLGLFESGGWPGVVAILG 160 (495)
T ss_pred -hhHHHHHHHHHHHHHhhHHHHHHh--CChHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcccchHHHHHHH
Confidence 999999999999999999999999 99999999999999999988888999999999999999999999999999999
Q ss_pred eeecCcchhHHHHHHHHHHHHHHHHHHHHHHh-------hcCCchhHHHHHHHHHHHHHHhhhceeeecchhHHHhcCCH
Q 039541 199 EMVSKRWRGQVVIIGFTFFSFGLVSLPAVAYL-------SRGSSWKMLYVWTSIPSIVCCIIIYPFISESPRWLFIHGHE 271 (521)
Q Consensus 199 ~~~~~~~rg~~~~~~~~~~~~G~~i~~~i~~~-------~~~~~wr~~f~~~~~~~~~~~~~~~~~~~esp~~~~~~~~~ 271 (521)
.|+.+++|++.++++.+..++|.++|.++++. ....||||.|++.+++.++..+++++++|+.|....-. +.
T Consensus 161 ~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~~gW~~~FiI~G~i~~~~gi~~f~~lp~~P~~~~fl-~~ 239 (495)
T KOG2533|consen 161 NWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGLAGWRWLFIIEGVITLVLGIVVFFFLPDNPSKAWFL-TD 239 (495)
T ss_pred hhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCCcCCceeehhHHHHHHHHHHheEEEEecCChhhcccc-ch
Confidence 99999999999999999999999999999655 34579999999999999999989999999999622111 11
Q ss_pred HHHHHHHHHHhhhcCCCCCCCccccccCCCCCccccCCCcccccccHHHHhccHHHHHHHHHHHHHHHHHHHHHHhHHhh
Q 039541 272 AEAMAVLKRLASRSNYQSDYGLESCCLSNMPPKAKNVIPKLDLYSSLKDLFNRKWALRRLLTIMALAFGIGVVYFGLLLG 351 (521)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 351 (521)
+|..-..++..+ .+.. ...+..++..+++.+++|..|...+..++.....+...+..|++
T Consensus 240 ~ek~~~~~~~~~-~~~~-------------------~~~~~~~~~~~~~a~~dp~vw~~~l~~~~~~lv~~~~~~~lpl~ 299 (495)
T KOG2533|consen 240 EEKELVVERLRE-SPSG-------------------GIENKFKWKGFKEALKDPGVWPFSLCYFFLKLVNYGFSYWLPLY 299 (495)
T ss_pred HHHHHHHHHHHh-ccCC-------------------CcccccCHHHHHHHHhchhHHHHHHHHHHHhhccccHHHHHHHH
Confidence 111111112111 1000 00000223578999999998888888888888777777778888
Q ss_pred ccC-CCccH---HHHHHHHHHHhHhHHHHHHHHHhh----cCCchHHHHHHHHHHHHH-HHHHhcCCchHHHHHHHHHHH
Q 039541 352 VGN-LSFNI---YLSLAFNGLLDIPAYLLTFILIER----WSRKSSILTFCILSGTCS-AICVAIGDEQEVLQIGLELAS 422 (521)
Q Consensus 352 ~~~-~~~~~---~~~~~~~~~~~~~~~~~~g~l~dr----~g~~~~~~~~~~~~~i~~-~~~~~~~~~~~~~~~~~~~~~ 422 (521)
+.+ .+.+. ........++++++.++.|+++|| ..+|........+..+.. ..+...... .......+..
T Consensus 300 l~~~~~~s~~~a~~ls~~~~~~g~v~~i~ag~lsdr~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~--~~~~~~~~~~ 377 (495)
T KOG2533|consen 300 LKSNGGYSELQANLLSTPYDVGGIVGLILAGYLSDRLKTIFARRLLFIVFLCLYAIIGAISLLAAAVL--PGAYGAFLIG 377 (495)
T ss_pred HHcCCCcChHHhccccchHHhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHhhccc--hHHhHHHHhc
Confidence 877 33433 333466778899999999999999 455555554444444333 333333222 3444444555
Q ss_pred HHHHHHHHHHHHHhhccccCchhhhhh-hHHHHHhhhhhhhHHHHHH
Q 039541 423 FFSACVAFNVLLVFGTELFTTCVRNST-TSLVRQAVNLGAAFSPVLI 468 (521)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~r~~~-~~~~~~~~~~g~~~~p~~~ 468 (521)
.++.....+......++....+.|... .+........++.++|.+.
T Consensus 378 ~~~~~~~~~~~~~w~s~~~~g~~k~~~~~~~~i~~~~s~~~~~~~~~ 424 (495)
T KOG2533|consen 378 PYGLIATAIIALSWTSANLAGNTKALTTVSAIIDGTGSAGAISGQLF 424 (495)
T ss_pred chhhHHHHHHHHhhccccccchHHhHHHHhhhhcchhHHHHhhhhhc
Confidence 555666667777777777765555444 3444444455555555554
No 66
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.97 E-value=7.8e-28 Score=235.89 Aligned_cols=338 Identities=12% Similarity=0.059 Sum_probs=251.0
Q ss_pred HHHHHHHHHHHHHHHhhhhccccCCcccccCCcccccCCccccccccCcceecCCCCcceeeecceeeCCccccchhhHH
Q 039541 45 VILISLLLIFESQQTFISVYTDEEPTWHCINNTTTCSSSSDICTLSKSAWAWDRPSDTTIISDWSLECAGSSILSGLPSS 124 (521)
Q Consensus 45 ~~~~~l~~~~~~~~~~~~~~~~~~p~~~c~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s 124 (521)
+.++++..+.-++......+. .|.+++++|++..+. |++.+
T Consensus 5 ~~~~~~~f~~~G~~~~~~~~l-----------------------------------~~~~~~~~~~s~~~~----g~l~s 45 (410)
T TIGR00885 5 FALITSLFALWGFANDITNPM-----------------------------------VPQFQQAFTLTAFQA----ALVQS 45 (410)
T ss_pred HHHHHHHHHHHHHHHHhHHHH-----------------------------------HHHHHHHhCCCHHHH----HHHHH
Confidence 455666777777777777788 899999999999776 99999
Q ss_pred HHHHHHHHhhhhhhhccccCCCCchHHHHHHHHHHHHHHHHHhc---cccHHHHHHHHHHhhccchhhHhhhhhheeeee
Q 039541 125 CFFIGCLLGGLALSTLGDSSSLGRKKLLFLSCFAMSITALATIF---ANNIWIYSTIRFVAGFFRAPIMTSVIVLLSEMV 201 (521)
Q Consensus 125 ~~~lg~~i~~~~~g~l~dr~~~Grr~~l~~~~~~~~~~~~~~~~---~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~ 201 (521)
.+.+++.+++++.|++.|| +|||+++++++++.+++.++... .++++.+++.|++.|+|.|...+....++.+..
T Consensus 46 ~~~~g~~i~~~~~g~l~~r--~G~r~~~~~g~~l~~~g~~l~~~~~~~~~~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~ 123 (410)
T TIGR00885 46 AFYGGYFIMAIPAAIFMKK--LSYKAGILLGLFLYALGAFLFWPAAEIMNYTLFLVGLFILTAGLGFLETAANPYILVMG 123 (410)
T ss_pred HHHHHHHHHHHHHHHHHHH--hCchHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHhhHHHHHhhhhHHHHHHC
Confidence 9999999999999999999 99999999999999999988644 468999999999999999999999999999999
Q ss_pred cCcchhHHHHHHHHHHHHHHHHHHHHH-Hhhc--------------------------CCchhHHHHHHHHHHHHHHhhh
Q 039541 202 SKRWRGQVVIIGFTFFSFGLVSLPAVA-YLSR--------------------------GSSWKMLYVWTSIPSIVCCIII 254 (521)
Q Consensus 202 ~~~~rg~~~~~~~~~~~~G~~i~~~i~-~~~~--------------------------~~~wr~~f~~~~~~~~~~~~~~ 254 (521)
|+++|++.+++.+...++|..++|.++ .+.. ..+||++|++.+++.++..++.
T Consensus 124 ~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~fl~~a~~~~~~~~~~ 203 (410)
T TIGR00885 124 PESTATRRLNLAQSFNPFGSIIGMVVAQQLILSNLPHQSQDVLDKLSPEELSAIKHSDLASVQTPYMIIGAVVLAVALLI 203 (410)
T ss_pred CHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccchhhhhhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999884 3321 1359999999888777665333
Q ss_pred c-eeeecchhHHHhcCCHHHHHHHHHHHhhhcCCCCCCCccccccCCCCCccccCCCcccccccHHHHhccHHHHHHHHH
Q 039541 255 Y-PFISESPRWLFIHGHEAEAMAVLKRLASRSNYQSDYGLESCCLSNMPPKAKNVIPKLDLYSSLKDLFNRKWALRRLLT 333 (521)
Q Consensus 255 ~-~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 333 (521)
. ...||.++ ++ ++ +.+..++.++++|+|.++...+.
T Consensus 204 ~~~~~p~~~~-----~~-~~-------------------------------------~~~~~~~~~~~~~~~~~~~~~l~ 240 (410)
T TIGR00885 204 MLTKMPALNH-----SD-AK-------------------------------------QISFSASLSRLARIRHYREGVIA 240 (410)
T ss_pred HHhcCCCCCc-----cc-cc-------------------------------------cccchhhHHHHHhChhHHHHHHH
Confidence 2 11232110 00 00 00001144567888887665555
Q ss_pred HHHHHHHHHHHHHhHHhhccCC--CccHH---HHHHHHHHHhHhHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHhcC
Q 039541 334 IMALAFGIGVVYFGLLLGVGNL--SFNIY---LSLAFNGLLDIPAYLLTFILIERWSRKSSILTFCILSGTCSAICVAIG 408 (521)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~---~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~i~~~~~~~~~ 408 (521)
.+++..........++.+.++. +.+.. ...........+|+++++++.||+++|+.+.++..+..+.+++..+.+
T Consensus 241 ~f~yvg~e~~~~s~l~~y~~~~~~~~~~~~a~~~~~~~~~~~~vGR~~~~~l~~r~~~~~~l~i~~~~~~~~~ll~~~~~ 320 (410)
T TIGR00885 241 QFFYVGVQIMCWTFIIQYAVRLIPGMTAGFAANYNIGAMVIFFISRFIGTWLISYLAAHKVLMAYAIIGMALCLGSIFAG 320 (410)
T ss_pred HHHHHHHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHcC
Confidence 4444333323333334433332 21111 122223355678999999999999999998888888888877777655
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHhhccccCchhhhhhhHHHHHhhhhhhhHHHHHHHhh
Q 039541 409 DEQEVLQIGLELASFFSACVAFNVLLVFGTELFTTCVRNSTTSLVRQAVNLGAAFSPVLISAG 471 (521)
Q Consensus 409 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~~ 471 (521)
.. .......+.+++.+..+|..++...+..+++.+..+.++.... +|+.+.|.+.|..
T Consensus 321 ~~---~~~~~l~~~glf~s~~fp~i~sl~~~~~g~~~~~~s~~l~~~~--~Gga~~p~l~G~~ 378 (410)
T TIGR00885 321 GH---VGLYCLTLCSAFMSLMFPTIYGIALKGLGQDTKYGAAGLVMAI--IGGGIVPPLQGFI 378 (410)
T ss_pred Ch---HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhHHHHHHHH--hccchHHHHHHHH
Confidence 43 3456677788889999999999999999988755455555443 9999999999873
No 67
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.97 E-value=4.6e-28 Score=237.66 Aligned_cols=339 Identities=10% Similarity=0.054 Sum_probs=241.3
Q ss_pred CcceeeecceeeCCccccchhhHHHHHHHHHHhhhhhhhccccCCCCchHHHHHHHHHHHHHHHHHhccccHHHHHHHHH
Q 039541 101 DTTIISDWSLECAGSSILSGLPSSCFFIGCLLGGLALSTLGDSSSLGRKKLLFLSCFAMSITALATIFANNIWIYSTIRF 180 (521)
Q Consensus 101 ~~~i~~~~~~~~~~~~~~~~~~~s~~~lg~~i~~~~~g~l~dr~~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~ 180 (521)
.+.+++++|++..+. |++.+.+.++..+.+++.|+++|| +|||++++.+.++.+++.+++.++++++.+++.|+
T Consensus 34 ~~~~~~~~g~s~~~~----gl~~~~~~l~~~~~~~~~G~l~dr--~g~k~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 107 (400)
T PRK11646 34 SIRFVDQLGWAAVMV----GIALGLRQFIQQGLGIFGGAIADR--FGAKPMIVTGMLMRAAGFATMAIAHEPWLLWLSCI 107 (400)
T ss_pred HHHHHHHhCCcHHHH----HHHHHHHHHHHHHHHhhhhHHHHH--hCchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHH
Confidence 345678899998665 999999999999999999999999 99999999999999999999999999999999999
Q ss_pred HhhccchhhHhhhhhheeeeecCcchhHHHHHHHHHHHHHHHHHHHH-HHhhcCCchhHHHHHHHHHHHHHHhhhceeee
Q 039541 181 VAGFFRAPIMTSVIVLLSEMVSKRWRGQVVIIGFTFFSFGLVSLPAV-AYLSRGSSWKMLYVWTSIPSIVCCIIIYPFIS 259 (521)
Q Consensus 181 l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~i~~~i-~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~~~ 259 (521)
++|++.+...+...+++.|++|+++|++++++......+|..+||.+ +.+. .++||+.|++.++..++..++..+++|
T Consensus 108 l~g~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~-~~g~~~~f~~~~~~~~~~~i~~~~~~~ 186 (400)
T PRK11646 108 LSGLGGTLFDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLL-QYDFRLVCATGAVLFVLAAAFNAWLLP 186 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 99999998889999999999999999999999999999999999999 5555 779999999988877766544444555
Q ss_pred cchhHHHhcCCHHHHHHHHHHHhhhcCCCCCCCccccccCCCCCccccCCCcccccccHHHHhccHHHHHHHHHHHHHHH
Q 039541 260 ESPRWLFIHGHEAEAMAVLKRLASRSNYQSDYGLESCCLSNMPPKAKNVIPKLDLYSSLKDLFNRKWALRRLLTIMALAF 339 (521)
Q Consensus 260 esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 339 (521)
|.+. +...++ ..++++++++++.++...+.......
T Consensus 187 ~~~~----~~~~~~----------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (400)
T PRK11646 187 AYKL----STVRTP----------------------------------------VREGMTRVLRDKRFVTYVLTLTGYYM 222 (400)
T ss_pred cccc----cccchh----------------------------------------hHHHHHHHHcCchHHHHHHHHHHHHH
Confidence 4210 000000 01245677788776544333322222
Q ss_pred HHHHHHHhHHhhccCCCccHHHHHHH---HHHHhHhHHHHHHHHH-hhcCCchHHHHHHHHHHHHHHHHHhcCCchHHHH
Q 039541 340 GIGVVYFGLLLGVGNLSFNIYLSLAF---NGLLDIPAYLLTFILI-ERWSRKSSILTFCILSGTCSAICVAIGDEQEVLQ 415 (521)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~g~l~-dr~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 415 (521)
.........|.+.++.+.+....... .++....+....+++. ||++.++.+..+..+.+++.+.+...++. +..
T Consensus 223 ~~~~~~~~~p~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~ 300 (400)
T PRK11646 223 LAVQVMLMLPIMVNDIAGSPSAVKWMYAIEACLSLTLLYPIARWSEKRFRLEHRLMAGLLIMSLSMFPIGMVSNL--QQL 300 (400)
T ss_pred HHHHHHHhhhhhHHhhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHhhhH--HHH
Confidence 22222234566666544443333222 2333333333334444 55666666677777777776655544332 334
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhccccCchhhhhhhHHHHHhhhhhhhHHHHHHHhhcc-----c-hhHHHHHHHHHHHHH
Q 039541 416 IGLELASFFSACVAFNVLLVFGTELFTTCVRNSTTSLVRQAVNLGAAFSPVLISAGRQ-----N-EFLSFGVFGLVVFCF 489 (521)
Q Consensus 416 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~~~~-----~-~~~~~~~~~~~~~~~ 489 (521)
.+..++.+.+.+...+...++..+..|++.||++.|+.+....+|..++|.+.|...+ + ....+.+.+++.+++
T Consensus 301 ~~~~~l~~~g~~~~~p~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~ig~~l~G~l~~~~~~~~~~~~~~~~~~~~~~~~ 380 (400)
T PRK11646 301 FTLICLFYIGSIIAEPARETLSASLADARARGSYMGFSRLGLALGGAIGYIGGGWLFDLGKALNQPELPWMMLGIIGLIT 380 (400)
T ss_pred HHHHHHHHHHHHHHHccHHHHHHhcCCcccchhhhhHHHHHHHHHHHhcccchHHHHHHHhhcCCcchHHHHHHHHHHHH
Confidence 4445566667777778888999999999999999999999999999999999986321 1 244555555555554
Q ss_pred hHh
Q 039541 490 GFF 492 (521)
Q Consensus 490 ~~~ 492 (521)
.+.
T Consensus 381 ~~~ 383 (400)
T PRK11646 381 LLA 383 (400)
T ss_pred HHH
Confidence 433
No 68
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.97 E-value=3.2e-28 Score=239.81 Aligned_cols=325 Identities=18% Similarity=0.198 Sum_probs=221.3
Q ss_pred CcceeeecceeeCCccccchhhHH-----HHHHHHHHhhhhhhhccccCCCCchHHHHHHHHHHHHHHHHHhccccHH--
Q 039541 101 DTTIISDWSLECAGSSILSGLPSS-----CFFIGCLLGGLALSTLGDSSSLGRKKLLFLSCFAMSITALATIFANNIW-- 173 (521)
Q Consensus 101 ~~~i~~~~~~~~~~~~~~~~~~~s-----~~~lg~~i~~~~~g~l~dr~~~Grr~~l~~~~~~~~~~~~~~~~~~~~~-- 173 (521)
.+.+.+++..+.++ .+.+.+.+ ..+++..+++++.|+++|| +|||++++.+.++.+++.++++++++++
T Consensus 16 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~i~~~~~G~l~dr--~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~ 91 (394)
T TIGR00883 16 AVLVFHTFFPPSGD--PLVALLATFATFAAGFLARPLGAIVFGHFGDR--IGRKKTLVITLLMMGIGTLLIGLLPSYATI 91 (394)
T ss_pred HHHHHHHhcCCCCC--hHHHHHHHHHHHHHHHHHhhhHHHHhhhhhhh--hhhHHHHHHHHHHHHHHHHHHhhCCChhhh
Confidence 55666665432111 11244333 3334445789999999999 9999999999999999999999999875
Q ss_pred ------HHHHHHHHhhccchhhHhhhhhheeeeecCcchhHHHHHHHHHHHHHHHHHHHHHHhh---------cCCchhH
Q 039541 174 ------IYSTIRFVAGFFRAPIMTSVIVLLSEMVSKRWRGQVVIIGFTFFSFGLVSLPAVAYLS---------RGSSWKM 238 (521)
Q Consensus 174 ------~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~i~~~i~~~~---------~~~~wr~ 238 (521)
.+++.|+++|++.+...+...+++.|++|+++|+++.++.+.+..+|.++++.++... ..++||+
T Consensus 92 ~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~G~~i~~~~~~~~~~~~~~~~~~~~~w~~ 171 (394)
T TIGR00883 92 GIWAPILLLLARLIQGFSLGGEWGGAALYLAEYAPPGKRGFYGSFQQVGAPVGLLLAALTVLLLSYLLGDDALLEWGWRI 171 (394)
T ss_pred HHHHHHHHHHHHHHHHhhccccccccHHHhhhcCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhhccchHH
Confidence 5889999999999999999999999999999999999999999999999998874322 3579999
Q ss_pred HHHHHHHHHHHHHhhhceeeecchhHHHhcCCHHHHHHHHHHHhhhcCCCCCCCccccccCCCCCccccCCCcccccccH
Q 039541 239 LYVWTSIPSIVCCIIIYPFISESPRWLFIHGHEAEAMAVLKRLASRSNYQSDYGLESCCLSNMPPKAKNVIPKLDLYSSL 318 (521)
Q Consensus 239 ~f~~~~~~~~~~~~~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (521)
.|++.+++.++.. +....+||+|++...++ + .+ +...+.
T Consensus 172 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-------------~-~~--------------------------~~~~~~ 210 (394)
T TIGR00883 172 PFLVSAVLVLIGL-YLRRNLEETPVFEKAQE-------------K-HK--------------------------KKRGPI 210 (394)
T ss_pred HHHHHHHHHHHHH-HHHHhcCCChhHHHHHh-------------c-cc--------------------------cccCCH
Confidence 9998877766655 44455666653211000 0 00 001245
Q ss_pred HHHhccHH--HHHHHHHHHHHHHHHHHHHHhHHhhc-cCCCccHH---HHHHHHHHHhHhHHHHHHHHHhhcCCchHHHH
Q 039541 319 KDLFNRKW--ALRRLLTIMALAFGIGVVYFGLLLGV-GNLSFNIY---LSLAFNGLLDIPAYLLTFILIERWSRKSSILT 392 (521)
Q Consensus 319 ~~l~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~---~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~ 392 (521)
++.+++++ ++......+.............|.+. ++.+.+.. .......+..+++.++.+++.||+|||+.+..
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~ 290 (394)
T TIGR00883 211 RETLTKHRKPFLLGLGLVIATTTTFYLITTYLPTYLTQTLGLSANSALLVLMLSLILFFITIPLSGALSDRIGRRPVLII 290 (394)
T ss_pred HHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHH
Confidence 56666554 33323232233333333333344444 44444432 33344567778889999999999999997775
Q ss_pred HHHHHHHHH-HHH-HhcCCchHHHHHHHHHHHHHHHHHHHHHHHHhhccccCchhhhhhhHHHH-HhhhhhhhHHHHHHH
Q 039541 393 FCILSGTCS-AIC-VAIGDEQEVLQIGLELASFFSACVAFNVLLVFGTELFTTCVRNSTTSLVR-QAVNLGAAFSPVLIS 469 (521)
Q Consensus 393 ~~~~~~i~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~-~~~~~g~~~~p~~~~ 469 (521)
...+..+.. ..+ ........+......++.+++.+...+....+..|.+|++.|+++.++.. ....+|..++|.+.|
T Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~p~~~g 370 (394)
T TIGR00883 291 FTVLAALLAVPLLMALLDSGSFTLFFFLVLGLALIGGMYTGPMGSFLPELFPTEVRYTGASLAYNLAGAIFGGFAPYIAA 370 (394)
T ss_pred HHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHhhhHHHHHHHhCCccceeeEeeehhHhHHHHHhhHHHHHHH
Confidence 554443332 222 22222222444555667777777888899999999999999999999854 445678889999998
Q ss_pred h
Q 039541 470 A 470 (521)
Q Consensus 470 ~ 470 (521)
.
T Consensus 371 ~ 371 (394)
T TIGR00883 371 A 371 (394)
T ss_pred H
Confidence 6
No 69
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.96 E-value=7.2e-28 Score=233.40 Aligned_cols=321 Identities=22% Similarity=0.317 Sum_probs=263.3
Q ss_pred CcceeeecceeeCCccccchhhHHHHHHHHHHhhhhhhhccccCCCCchHHHHHHHHHHHHHHHHHhccccHHHHHHHHH
Q 039541 101 DTTIISDWSLECAGSSILSGLPSSCFFIGCLLGGLALSTLGDSSSLGRKKLLFLSCFAMSITALATIFANNIWIYSTIRF 180 (521)
Q Consensus 101 ~~~i~~~~~~~~~~~~~~~~~~~s~~~lg~~i~~~~~g~l~dr~~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~ 180 (521)
.|.+.+++|.+.++. +++.+.+.++..+++++.|+++|| +|||+.+.++..+..++.++..++++++.+++.|+
T Consensus 22 ~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~g~~~d~--~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (352)
T cd06174 22 LPLLAEDLGLSASQA----GLIVSAFSLGYALGSLLAGYLSDR--FGRRRVLLLGLLLFALGSLLLAFASSLWLLLVGRF 95 (352)
T ss_pred HHHHHHHcCCCHHHH----HHHHHHHHHHHHHHHHhHHHHHHH--hCCchhhHHHHHHHHHHHHHHHHhccHHHHHHHHH
Confidence 788888899888666 999999999999999999999999 99999999999999999999999999999999999
Q ss_pred HhhccchhhHhhhhhheeeeecCcchhHHHHHHHHHHHHHHHHHHHH-HHhhcCCchhHHHHHHHHHHHHHHhhhceeee
Q 039541 181 VAGFFRAPIMTSVIVLLSEMVSKRWRGQVVIIGFTFFSFGLVSLPAV-AYLSRGSSWKMLYVWTSIPSIVCCIIIYPFIS 259 (521)
Q Consensus 181 l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~i~~~i-~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~~~ 259 (521)
+.|++.+...+...+++.|++|+++|++++++......+|..++|.+ +.+.+..+||+.+++.+++.++..++. .+++
T Consensus 96 l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 174 (352)
T cd06174 96 LLGLGGGALYPAAAALIAEWFPPKERGRALGLFSAGFGLGALLGPLLGGLLAESLGWRWLFLILAILGLLLALLL-LFLL 174 (352)
T ss_pred HHHcccccccHhHHHHHHHhCCccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHH-HHHH
Confidence 99999999999999999999999999999999999999999999998 667777789999999888877766332 2221
Q ss_pred cchhHHHhcCCHHHHHHHHHHHhhhcCCCCCCCccccccCCCCCccccCCCcccccccHHHHhccHHHHHHHHHHHHHHH
Q 039541 260 ESPRWLFIHGHEAEAMAVLKRLASRSNYQSDYGLESCCLSNMPPKAKNVIPKLDLYSSLKDLFNRKWALRRLLTIMALAF 339 (521)
Q Consensus 260 esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 339 (521)
|.++...+.......
T Consensus 175 -----------------------------------------------------------------~~~~~~~~~~~~~~~ 189 (352)
T cd06174 175 -----------------------------------------------------------------RLLLLLALAFFLLSF 189 (352)
T ss_pred -----------------------------------------------------------------HHHHHHHHHHHHHHh
Confidence 122233333334444
Q ss_pred HHHHHHHhHHhhccCC-CccH---HHHHHHHHHHhHhHHHHHHHHHhhcCCch-HHHHHHHHHHHHHHHHHhcCCchHHH
Q 039541 340 GIGVVYFGLLLGVGNL-SFNI---YLSLAFNGLLDIPAYLLTFILIERWSRKS-SILTFCILSGTCSAICVAIGDEQEVL 414 (521)
Q Consensus 340 ~~~~~~~~~~~~~~~~-~~~~---~~~~~~~~~~~~~~~~~~g~l~dr~g~~~-~~~~~~~~~~i~~~~~~~~~~~~~~~ 414 (521)
.........+.+.++. +.+. ........++.+++.++.+++.||++||+ .+..+..+..++.+.+....+. +.
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~--~~ 267 (352)
T cd06174 190 GYYGLLTYLPLYLQEVLGLSAAEAGLLLSLFGLGGILGALLGGLLSDRLGRRRLLLLIGLLLAALGLLLLALAPSL--AL 267 (352)
T ss_pred HHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccH--HH
Confidence 4444444444444443 4333 34445666788899999999999999999 9999988888888877765543 56
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccccCchhhhhhhHHHHHhhhhhhhHHHHHHHhh--ccchhHHHHHHHHHHHHHhHh
Q 039541 415 QIGLELASFFSACVAFNVLLVFGTELFTTCVRNSTTSLVRQAVNLGAAFSPVLISAG--RQNEFLSFGVFGLVVFCFGFF 492 (521)
Q Consensus 415 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 492 (521)
..+..++.+++.+...+....+..|..|++.|++..|+.+....+|..++|.+.+.. ..++...+.+.+++.+++.+.
T Consensus 268 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~g~l~~~~~~~~~~~~~~~~~~i~~i~ 347 (352)
T cd06174 268 LLVALLLLGFGLGFAFPALLTLASELAPPEARGTASGLFNTFGSLGGALGPLLAGLLLDTGGYGGVFLILAALALLAALL 347 (352)
T ss_pred HHHHHHHHHHHHhccchhHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHHHHHH
Confidence 677888888998999999999999999999999999999999999999999999863 456777888888887777665
Q ss_pred hhc
Q 039541 493 VVF 495 (521)
Q Consensus 493 ~~~ 495 (521)
.+.
T Consensus 348 ~~~ 350 (352)
T cd06174 348 LLL 350 (352)
T ss_pred hee
Confidence 544
No 70
>PRK10054 putative transporter; Provisional
Probab=99.96 E-value=1.3e-27 Score=234.10 Aligned_cols=336 Identities=13% Similarity=0.057 Sum_probs=240.9
Q ss_pred CcceeeecceeeCCccccchhhHHHHHHHHHHhhhhhhhccccCCCCchHHHHHHHHHHHHHHHHHhccccHHHHHHHHH
Q 039541 101 DTTIISDWSLECAGSSILSGLPSSCFFIGCLLGGLALSTLGDSSSLGRKKLLFLSCFAMSITALATIFANNIWIYSTIRF 180 (521)
Q Consensus 101 ~~~i~~~~~~~~~~~~~~~~~~~s~~~lg~~i~~~~~g~l~dr~~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~ 180 (521)
.+.+++++|++..+. |++.+.+.++..+++++.|+++|| +|||++++++.++.+++.++.+++++++.+++.|+
T Consensus 31 ~~~l~~~~g~s~~~~----g~~~s~~~~~~~~~~~~~G~l~Dr--~g~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 104 (395)
T PRK10054 31 TIYLSRQYSLSVDLI----GYAMTIALTIGVVFSLGFGILADK--FDKKRYMLLAITAFASGFIAIPLVNNVTLVVLFFA 104 (395)
T ss_pred HHHHHHHcCCCHHHH----HHHHHHHHHHHHHHHHHHHHHHhh--cCcchhHHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 345678899999666 999999999999999999999999 99999999999999999999999999999999999
Q ss_pred HhhccchhhHhhhhhheeeeecCcchhHHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHhhhceeeec
Q 039541 181 VAGFFRAPIMTSVIVLLSEMVSKRWRGQVVIIGFTFFSFGLVSLPAVAYLSRGSSWKMLYVWTSIPSIVCCIIIYPFISE 260 (521)
Q Consensus 181 l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~i~~~i~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~~~e 260 (521)
+.|.+.+...+...++..|..|+++|++++++.....++|.+++|.++..+...+|+.+|++.++..++..++..+++||
T Consensus 105 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l~~~g~~~~f~~~~~~~~i~~i~~~~~~~~ 184 (395)
T PRK10054 105 LINCAYSVFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLLVMQSINLPFWLAAICSAFPLVFIQIWVQR 184 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHhc
Confidence 99988888888899999999999999999999999999999999999544435799999999888777765455455555
Q ss_pred chhHHHhcCCHHHHHHHHHHHhhhcCCCCCCCccccccCCCCCccccCCCcccccccHHHHhccHHHHHHHHHHHHHHHH
Q 039541 261 SPRWLFIHGHEAEAMAVLKRLASRSNYQSDYGLESCCLSNMPPKAKNVIPKLDLYSSLKDLFNRKWALRRLLTIMALAFG 340 (521)
Q Consensus 261 sp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 340 (521)
+++. ++.++ ++ ..+.++++++|.++...+..++..+.
T Consensus 185 ~~~~----~~~~~-~~--------------------------------------~~~~~~~~~~~~~~~~~~~~~l~~~~ 221 (395)
T PRK10054 185 SEKA----IATET-GS--------------------------------------VWSPSVLLQDKALLWFTCSGFLASFV 221 (395)
T ss_pred cccc----cccch-hh--------------------------------------hhhhhhhccCceehHHHHHHHHHHHH
Confidence 4210 00000 00 01234567777766655554444443
Q ss_pred HHHHHHhHHhhc---cCCCccHHHH---HHHHHHHhHhHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHhcCCchHHH
Q 039541 341 IGVVYFGLLLGV---GNLSFNIYLS---LAFNGLLDIPAYLLTFILIERWSRKSSILTFCILSGTCSAICVAIGDEQEVL 414 (521)
Q Consensus 341 ~~~~~~~~~~~~---~~~~~~~~~~---~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 414 (521)
........+.+. .+.+.+.... ....++.........+++.||.++|+.+..+..+..++...+.+..+ +.+.
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~ 300 (395)
T PRK10054 222 SGAFASCISQYVMVVADSDFAEKVVAVVLPVNAAMVVSLQYSVGRRLNAANIRPLMTAGTLCFVIGLVGFIFSGN-SLLL 300 (395)
T ss_pred HHHhhhhHHHHHHHhcccchHHHHHHHHHHhhhhheeeehhHHHHHHccCCchhHHHHHHHHHHHHHHHHHHcch-HHHH
Confidence 322111112221 2333333222 22233344455677889999999999988888777777666654322 2234
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccccCchhhhhhhHHHHHhhhhhhhHHHHHHHhh--ccchhHHHHHHHHHHH
Q 039541 415 QIGLELASFFSACVAFNVLLVFGTELFTTCVRNSTTSLVRQAVNLGAAFSPVLISAG--RQNEFLSFGVFGLVVF 487 (521)
Q Consensus 415 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~~--~~~~~~~~~~~~~~~~ 487 (521)
..+..++.+++.....+.....+.+..|++.|+++.+..+ ...+|..++|.+.|.. ..++...+.+.+....
T Consensus 301 ~~~~~~~~~~g~~~~~p~~~~~~~~~~p~~~~~~~~~~~~-~~~~G~~~Gp~~~G~l~~~~g~~~~~~~~~~~~~ 374 (395)
T PRK10054 301 WGMSAAVFTVGEIIYAPGEYMLIDHIAPPGMKASYFSAQS-LGWLGAAINPLVSGVILTTLPPWSLFVILALAIV 374 (395)
T ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHhCCcccceehHhHHH-HHHHHHHHHHHHHHHHHHHcChhhHHHHHHHHHH
Confidence 4556677777777777888889999999999999988655 5678999999999863 3344445544444333
No 71
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.96 E-value=5e-27 Score=235.55 Aligned_cols=351 Identities=15% Similarity=0.110 Sum_probs=241.9
Q ss_pred CcceeeecceeeCCccccchhhHHHHHHHHHHhhhhhhhccccCCC-----CchHH-HHHHHHHHHHHHHHHhcc---cc
Q 039541 101 DTTIISDWSLECAGSSILSGLPSSCFFIGCLLGGLALSTLGDSSSL-----GRKKL-LFLSCFAMSITALATIFA---NN 171 (521)
Q Consensus 101 ~~~i~~~~~~~~~~~~~~~~~~~s~~~lg~~i~~~~~g~l~dr~~~-----Grr~~-l~~~~~~~~~~~~~~~~~---~~ 171 (521)
+|...++.|.+.++. |.+ +...+.+ ++.+++|+++|| + |||+. ++.+.+..+++..++++. ++
T Consensus 35 l~~~l~~~g~~~~~i----g~~-~~~~~~~-~~~~l~gpl~Dr--~~~~~~Grrr~~ll~~~i~~~~~~~~~a~~~~~~~ 106 (491)
T PRK11010 35 LQAWMTVENIDLKTI----GFF-SLVGQAY-VFKFLWSPLMDR--YTPPFLGRRRGWLLATQLLLLVAIAAMGFLEPGTQ 106 (491)
T ss_pred HHHHHHhCCCCHHHH----HHH-HHHHHHH-HHHHHHHHHHHc--ccccCCCCchHHHHHHHHHHHHHHHHHHHcCCcch
Confidence 677778888887555 665 3333333 688999999999 8 99986 667777777777777775 47
Q ss_pred HHHHHHHHHHhhccchhhHhhhhhheeeeecCcchhHHHHHHHHHHHHHHHHHHHH-HHhhc-CCchhHHHHHHHHHHHH
Q 039541 172 IWIYSTIRFVAGFFRAPIMTSVIVLLSEMVSKRWRGQVVIIGFTFFSFGLVSLPAV-AYLSR-GSSWKMLYVWTSIPSIV 249 (521)
Q Consensus 172 ~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~i~~~i-~~~~~-~~~wr~~f~~~~~~~~~ 249 (521)
++.+.+.+++.|++.+...+...+++.|++|+++|+++.++...+..+|.++++.+ +.+.+ ..|||..|++.+++.++
T Consensus 107 l~~l~~~~~l~~~~~a~~~i~~~a~~~~~~~~~~rg~~~~i~~~g~~lG~llg~~l~~~l~~~~~GWr~~f~i~a~l~ll 186 (491)
T PRK11010 107 LRWLAALAVVIAFCSASQDIVFDAWKTDVLPAEERGAGAAISVLGYRLAMLVSGGLALWLADRYLGWQGMYWLMAALLIP 186 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHH
Confidence 88999999999999999999999999999999999999999999999999999888 55666 46999999999988777
Q ss_pred HHhhhceeeecchhHHHhcCCHHHHHHHHHHHhhhcCCCCCCCccccccCCCCCccccCCCcccccccHHHHhccHHHHH
Q 039541 250 CCIIIYPFISESPRWLFIHGHEAEAMAVLKRLASRSNYQSDYGLESCCLSNMPPKAKNVIPKLDLYSSLKDLFNRKWALR 329 (521)
Q Consensus 250 ~~~~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 329 (521)
.. +..+++||+++.. .+.++.+ .....+++++++++..+.
T Consensus 187 ~~-l~~~~~~e~~~~~---~~~~~~~------------------------------------~~~~~~l~~~~~~~~~~~ 226 (491)
T PRK11010 187 CI-IATLLAPEPTDTI---PVPKTLE------------------------------------QAVVAPLRDFFGRNNAWL 226 (491)
T ss_pred HH-HHHHhcCCCcccc---ccccchh------------------------------------hhHHHHHHHHHcCcCHHH
Confidence 76 4444578764310 0000000 000124666777776554
Q ss_pred HHHHHHHHHHHHHHHH-HhHHhhccCCCccHHHHHH----HHHHHhHhHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHH
Q 039541 330 RLLTIMALAFGIGVVY-FGLLLGVGNLSFNIYLSLA----FNGLLDIPAYLLTFILIERWSRKSSILTFCILSGTCSAIC 404 (521)
Q Consensus 330 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~i~~~~~ 404 (521)
..+..+.........+ +..+++.++.|.+...... ...++.++|.+++|+++||+++|+.+.++.++.++..+.+
T Consensus 227 ~ll~~~l~~~~~~~~~~~~~~~l~~~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~g~~~~l~i~~~l~~l~~l~~ 306 (491)
T PRK11010 227 ILLLIVLYKLGDAFAMSLTTTFLIRGVGFDAGEVGLVNKTLGLLATIVGALYGGILMQRLSLFRALMIFGILQGVSNAGY 306 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHH
Confidence 4444444333333333 3344444556665544332 2235778899999999999999887776665555443332
Q ss_pred Hh--cCCchHHHHHHHHHHHHHHHHHHHHHHHHhhccccCchhhhhhhHHHHHhhhhhhhHHHHHHHh--hccchhHHHH
Q 039541 405 VA--IGDEQEVLQIGLELASFFSACVAFNVLLVFGTELFTTCVRNSTTSLVRQAVNLGAAFSPVLISA--GRQNEFLSFG 480 (521)
Q Consensus 405 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~--~~~~~~~~~~ 480 (521)
.. ....+.+...+..++..++.+...+..+++..+..+++.+++..|+.+....+|..+++.+.|. ...++...|.
T Consensus 307 ~~l~~~~~~~~~l~~~~~l~~~~~g~~~~~~~a~~~~l~~~~~~~t~~gl~~s~~~lg~~~~~~~~G~l~~~~G~~~~f~ 386 (491)
T PRK11010 307 WLLSITDKNLYSMGAAVFFENLCGGMGTAAFVALLMTLCNKSFSATQFALLSALSAVGRVYVGPVAGWFVEAHGWPTFYL 386 (491)
T ss_pred HHHHhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHH
Confidence 21 1111212333344454445555566677888888888888999999999999998877777775 3346777788
Q ss_pred HHHHHHHHHhHhhhccccC
Q 039541 481 VFGLVVFCFGFFVVFLPET 499 (521)
Q Consensus 481 ~~~~~~~~~~~~~~~~~~~ 499 (521)
+.+++++++.+....++++
T Consensus 387 ~~~~~~l~~l~~~~~~~~~ 405 (491)
T PRK11010 387 FSVAAAVPGLLLLLVCRQT 405 (491)
T ss_pred HHHHHHHHHHHHHHHHHhc
Confidence 7888887777666655543
No 72
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.96 E-value=1.4e-27 Score=232.79 Aligned_cols=323 Identities=15% Similarity=0.082 Sum_probs=221.9
Q ss_pred Ccc-eeeecceeeCCccccchhhHHHHHHHHHHhhhhhhhccccCCCCchHHHHHHHHHHHHHHHHHhccc-cHHHHHHH
Q 039541 101 DTT-IISDWSLECAGSSILSGLPSSCFFIGCLLGGLALSTLGDSSSLGRKKLLFLSCFAMSITALATIFAN-NIWIYSTI 178 (521)
Q Consensus 101 ~~~-i~~~~~~~~~~~~~~~~~~~s~~~lg~~i~~~~~g~l~dr~~~Grr~~l~~~~~~~~~~~~~~~~~~-~~~~l~~~ 178 (521)
.|. +++++|++..+. +++.+++.++..+++++.|+++|| +|||++++++.++.+++.+++++++ +++.+++.
T Consensus 24 ~~~~~~~~~~~s~~~~----~~~~~~~~~~~~~~~~~~g~l~dr--~g~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 97 (366)
T TIGR00886 24 AVQMIKDDLGLSTAQL----GNLVAVPVLAGAVLRIILGFLVDK--FGPRYTTTLSLLLLAIPCLWAGLAVQSYSVLLLL 97 (366)
T ss_pred hhHHHHHHhCCCHHHh----hHhhHHHHHHHHHHHHHHHHHHHH--hCchHHHHHHHHHHHHHHHHHHHHhhhHHHHHHH
Confidence 785 999999999777 999999999999999999999999 9999999999999999999999999 99999999
Q ss_pred HHHhhccchhhHhhhhhheeeeecCcchhHHHHHHHHHHHHHHHHHHHHH-Hhhc----------CCchhHHH-HHHHHH
Q 039541 179 RFVAGFFRAPIMTSVIVLLSEMVSKRWRGQVVIIGFTFFSFGLVSLPAVA-YLSR----------GSSWKMLY-VWTSIP 246 (521)
Q Consensus 179 r~l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~i~~~i~-~~~~----------~~~wr~~f-~~~~~~ 246 (521)
|+++|++.+ ..+....++.|++|+++|++++++......+|..+++.++ .+.. ..+||+.| +..+++
T Consensus 98 ~~~~g~~~~-~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~~~w~~~~~~~~~~~ 176 (366)
T TIGR00886 98 RLFIGIAGG-SFASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPPIIGSLIFGAGLPAHLAWGWAFVIVPAGI 176 (366)
T ss_pred HHHHHHhch-hhHhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcccccccccccchhHHHHHHH
Confidence 999999966 4566788999999999999999999877777777766653 2221 34899999 444555
Q ss_pred HHHHHhhhceeeecchhHHHhcCCHHHHHHHHHHHhhhcCCCCCCCccccccCCCCCccccCCCcccccccHHHHhccHH
Q 039541 247 SIVCCIIIYPFISESPRWLFIHGHEAEAMAVLKRLASRSNYQSDYGLESCCLSNMPPKAKNVIPKLDLYSSLKDLFNRKW 326 (521)
Q Consensus 247 ~~~~~~~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 326 (521)
..+..++.+.+.+|+|+. +.++.+. + .... . .. ...+.....++.+++++
T Consensus 177 ~~~~~~~~~~~~~~~~~~-----~~~~~~~------~-~~~~------~-------~~-----~~~~~~~~~~~~~~~~~ 226 (366)
T TIGR00886 177 LLLPALLIFFVGADTPPG-----KPATGKL------S-FKGA------R-------WS-----VGTGALGDQLKVFRDRH 226 (366)
T ss_pred HHHHHHHHHHhcccCCcc-----cccchhc------c-cccc------c-------cc-----ccchhHHHHHHHHhccc
Confidence 555444555566766531 0000000 0 0000 0 00 00000114566777777
Q ss_pred HHHHHHHHHHHHHHHHHHHHhHHhhcc-CCCccHHH---HHHHHHHHhHhHHHHHHHHHhhcCCchHHHHHHHHHHHHHH
Q 039541 327 ALRRLLTIMALAFGIGVVYFGLLLGVG-NLSFNIYL---SLAFNGLLDIPAYLLTFILIERWSRKSSILTFCILSGTCSA 402 (521)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~---~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~i~~~ 402 (521)
++...+................+.+++ ..+.+... ......+..+++.++.+++.||+|+|+.+..+......+..
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~ 306 (366)
T TIGR00886 227 TWILALLYSVTFGSFLGVSSIFAMFFKDQFGLSKVTAGAYASLGGLLGSLARPLGGAISDRLGGARKLLMSFLGVAMGAF 306 (366)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHhhccchHHHhhccchhHHHHHHHHHHHHH
Confidence 655544444333333233333344443 34544433 33445567788899999999999998887777766666555
Q ss_pred HHHhcCCc--hHHHHHHHHHHHHHHHHHHHHHHHHhhccccCchhhhhhhHHHHHhhhhhh
Q 039541 403 ICVAIGDE--QEVLQIGLELASFFSACVAFNVLLVFGTELFTTCVRNSTTSLVRQAVNLGA 461 (521)
Q Consensus 403 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~ 461 (521)
++...... +.+...+...+..++.+...+..+.+..+..| +++|+++|+.+..+++|+
T Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g~ 366 (366)
T TIGR00886 307 LVVLGLVSPLSLAVFIVLFVALFFFSGAGNGSTFALVPHIFR-RATGAVSGLVGAIGNLGG 366 (366)
T ss_pred HHHhcCCCcchHHHHHHHHHHHHHHhccccchhhhcchhhch-hhcccHHHHHHHhccCCC
Confidence 55443332 22344445555556666666777888888887 578999999999887764
No 73
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.96 E-value=1.7e-26 Score=225.76 Aligned_cols=339 Identities=13% Similarity=-0.004 Sum_probs=248.1
Q ss_pred CcceeeecceeeCCccccchhhHHHHHHHHHHhhhhhhhccccCCCCchHHH----HHHHHHHHHHHHHHhccccHHHHH
Q 039541 101 DTTIISDWSLECAGSSILSGLPSSCFFIGCLLGGLALSTLGDSSSLGRKKLL----FLSCFAMSITALATIFANNIWIYS 176 (521)
Q Consensus 101 ~~~i~~~~~~~~~~~~~~~~~~~s~~~lg~~i~~~~~g~l~dr~~~Grr~~l----~~~~~~~~~~~~~~~~~~~~~~l~ 176 (521)
+|.+.+++|.+.++. |++.+.+.+...++++++|+++|| +|||+.. ..+..+..+ ..+..+++++.++
T Consensus 27 l~~~l~~~g~s~~~i----g~~~s~~~~~~~~~~~~~g~l~d~--~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~l~ 98 (382)
T TIGR00902 27 FPAWLKGIGLGEEMI----GLLIGAALIARFAGGLFFAPLIKD--ANHIIIALRLLALASAIFAA--AFSAGAHNAWLLF 98 (382)
T ss_pred HHHHHHHcCCCHHHH----HHHHHHHHHHHHHHHHHHHHHHHh--cCcHHHHHHHHHHHHHHHHH--HHHHhhhhHHHHH
Confidence 688889999999666 999999999999999999999999 9985433 222222222 2445778999999
Q ss_pred HHHHHhhccchhhHhhhhhheeeeecCcchhHHHHHHHHHHHHHHHHHHHH-HHhhcCCchhHHHHHHHHHHHHHHhhhc
Q 039541 177 TIRFVAGFFRAPIMTSVIVLLSEMVSKRWRGQVVIIGFTFFSFGLVSLPAV-AYLSRGSSWKMLYVWTSIPSIVCCIIIY 255 (521)
Q Consensus 177 ~~r~l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~i~~~i-~~~~~~~~wr~~f~~~~~~~~~~~~~~~ 255 (521)
+.|+++|.+.+...|...+++.++ +++|+++.+....+.++|.+++|.+ +.+.+.+|||..|++.++..++.. +..
T Consensus 99 ~~~~l~~~~~~~~~p~~~al~~~~--~~~~~~~~g~~~~~~slG~~~g~~l~g~l~~~~g~~~~f~~~~~~~~~~~-~~~ 175 (382)
T TIGR00902 99 IAIGLFALFFSAGMPIGDALANTW--QKQFGLDYGKVRLIGSAAFIIGSALFGGLIGMFDEQNILAILTAGLAFML-IGF 175 (382)
T ss_pred HHHHHHHHHHccchhHHHHHHHHH--HHHcCCCccHHHHHHHHHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHHH-HHH
Confidence 999999999888888888887654 4788999999999999999999988 788888899999988765533333 332
Q ss_pred eeeecchhHHHhcCCHHHHHHHHHHHhhhcCCCCCCCccccccCCCCCccccCCCcccccccHHHHhccHHHHHHHHHHH
Q 039541 256 PFISESPRWLFIHGHEAEAMAVLKRLASRSNYQSDYGLESCCLSNMPPKAKNVIPKLDLYSSLKDLFNRKWALRRLLTIM 335 (521)
Q Consensus 256 ~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 335 (521)
.++|+++ +++.++ + ++ .+...+.++++|+|+++...+..+
T Consensus 176 -~~~~~~~----~~~~~~------------------------------~-~~----~~~~~~~~~~l~~~~~~~~l~~~~ 215 (382)
T TIGR00902 176 -LIKPTIP----PKDAIP------------------------------E-DE----SQGDSAFIALLKNPMNLRFLAAVC 215 (382)
T ss_pred -HcCCCCC----CCcccc------------------------------c-cc----cccchhHHHHHcChHHHHHHHHHH
Confidence 3333221 000000 0 00 000125678899998887777666
Q ss_pred HHHHHHHHHHHhHHhhccCCCccHHHHH---HHHHHHhHhHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHhcCCchH
Q 039541 336 ALAFGIGVVYFGLLLGVGNLSFNIYLSL---AFNGLLDIPAYLLTFILIERWSRKSSILTFCILSGTCSAICVAIGDEQE 412 (521)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~i~~~~~~~~~~~~~ 412 (521)
+........+...+.++++.|.+....+ .+..+..+++.++.+++.||+|+|+.+.++.+..++....+.+.++.
T Consensus 216 l~~~~~~~~~~~~~~~l~~~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~-- 293 (382)
T TIGR00902 216 LIQGAHAAYYGFSAIYWQAAGISASATGLLWGIGVLAEIIIFAFSNKLFQNCSARDLLLISAIACVGRWAIIGAIEAF-- 293 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCHhHHHHHHHHHHHHHHHHHHHhHHHHhhCCHHHHHHHHHHHHHHHHHHHHhHhhH--
Confidence 6666655555455666677776654433 34456677888889999999999999999999999888777664433
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccccCchhhhhhhHHHHH-hhhhhhhHHHHHHHhhccc-hhHHHHHHHHHHHHHh
Q 039541 413 VLQIGLELASFFSACVAFNVLLVFGTELFTTCVRNSTTSLVRQ-AVNLGAAFSPVLISAGRQN-EFLSFGVFGLVVFCFG 490 (521)
Q Consensus 413 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~-~~~~g~~~~p~~~~~~~~~-~~~~~~~~~~~~~~~~ 490 (521)
+..+...++.++..+..++....++.+. |++.|+++.++.+. ...+|..++|.+.|+..+. ....|.+.+++.+++.
T Consensus 294 ~~~~~~q~l~g~~~~~~~~~~~~~i~~~-~~~~~~~~q~~~~~~~~g~g~~~g~~~~G~l~~~~g~~~~~~~~~~~~~~~ 372 (382)
T TIGR00902 294 PLIFLLQILHCGTFAVCHLAAMRYIAAQ-PGSEIAKLQALYNALAMGGLIAIFTAFAGFIYPTLGAGTFVFMAIIAAAAF 372 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhC-CHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHH
Confidence 5667778999999999999999999988 99999999999864 4578899999999873221 2345666666666554
Q ss_pred Hhh
Q 039541 491 FFV 493 (521)
Q Consensus 491 ~~~ 493 (521)
++.
T Consensus 373 ~~~ 375 (382)
T TIGR00902 373 FLI 375 (382)
T ss_pred HHH
Confidence 443
No 74
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.96 E-value=6.2e-28 Score=238.45 Aligned_cols=414 Identities=16% Similarity=0.094 Sum_probs=304.5
Q ss_pred CChhHHHHHHHHHHHHHHHHHHHhhhhccccCCcccccCCcccccCCccccccccCcceecCCCCcceeeecceeeCCcc
Q 039541 37 LGLPQFIQVILISLLLIFESQQTFISVYTDEEPTWHCINNTTTCSSSSDICTLSKSAWAWDRPSDTTIISDWSLECAGSS 116 (521)
Q Consensus 37 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~p~~~c~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 116 (521)
-+.|.|.+++..++..+.........+.. .+.++++++-+.++.
T Consensus 40 dGG~gWvV~~a~fl~~~~~~g~~~~~Gv~-----------------------------------~~~~~~~f~~s~~~~- 83 (509)
T KOG2504|consen 40 DGGWGWVVVFASFLVNLSTDGLINSFGLL-----------------------------------FEELMDYFGSSSSQI- 83 (509)
T ss_pred CCCeeeeeeHhHHHHHHhhhcchheehhh-----------------------------------HHHHHHHhCCCccHH-
Confidence 56788888888888877766666666667 789999999999777
Q ss_pred ccchhhHHHHHHHHHHhhhhhhhccccCCCCchHHHHHHHHHHHHHHHHHhccccHHHHHHHH-HHhhccchhhHhhhhh
Q 039541 117 ILSGLPSSCFFIGCLLGGLALSTLGDSSSLGRKKLLFLSCFAMSITALATIFANNIWIYSTIR-FVAGFFRAPIMTSVIV 195 (521)
Q Consensus 117 ~~~~~~~s~~~lg~~i~~~~~g~l~dr~~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r-~l~G~~~g~~~~~~~~ 195 (521)
+|+.++..-...+..|+.+.+.|| ||.|++.+.|.++..+|.++.+|++++|++++.. ++.|+|.|..+.....
T Consensus 84 ---~~i~sl~~~~~~~~gpl~s~l~~r--fg~R~v~i~G~~v~~~g~~lssF~~~i~~l~lt~gvi~G~G~~~~~~paiv 158 (509)
T KOG2504|consen 84 ---AWIGSLLLGVYLLAGPLVSALCNR--FGCRTVMIAGGLVAALGLLLSSFATSLWQLYLTFGVIGGLGLGLIYLPAVV 158 (509)
T ss_pred ---HHHHHHHHHHHHHhccHHHHHHhh--cCchHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhccchhhhcchhh
Confidence 999999999999999999999999 9999999999999999999999999999887764 9999999999999999
Q ss_pred heeeeecCcchhHHHHHHHHHHHHHHHHHHHH-HHhhcCCchhHHHHHHHHHHHHHHhhhceeeecchhHHHhcCCHHHH
Q 039541 196 LLSEMVSKRWRGQVVIIGFTFFSFGLVSLPAV-AYLSRGSSWKMLYVWTSIPSIVCCIIIYPFISESPRWLFIHGHEAEA 274 (521)
Q Consensus 196 ~i~~~~~~~~rg~~~~~~~~~~~~G~~i~~~i-~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~~~esp~~~~~~~~~~~~ 274 (521)
.+..+|+ |+|+.+.|+...+.++|.++-|.+ .++++..|||+.+++.+.+.+-..+.....-|.+++.. .+.++.
T Consensus 159 iv~~YF~-kkR~lA~Gia~~GsG~G~~~~~~l~~~l~~~~G~r~~~l~~~~~~l~~~~~~~~~rp~~~~~~---~~~~~~ 234 (509)
T KOG2504|consen 159 ILGTYFE-KKRALATGIAVSGTGVGTVVFPPLLKYLLSKYGWRGALLIFGGISLNVLVAGALLRPLSPPKK---PNEEKD 234 (509)
T ss_pred hhhhHhH-HHHHHHHhhhhccCCcceeeHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCCCCcCCC---chhhhh
Confidence 9998886 899999999999999998887666 88999999999999999888777744444444333210 000000
Q ss_pred HHHHHHHhhh-------cCCCCCCCccccccCCCC-CccccCCCc--ccccccH---HHHhccHHHHHHHHHHHHHHHHH
Q 039541 275 MAVLKRLASR-------SNYQSDYGLESCCLSNMP-PKAKNVIPK--LDLYSSL---KDLFNRKWALRRLLTIMALAFGI 341 (521)
Q Consensus 275 ~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~-~~~~~~~~~--~~~~~~~---~~l~~~~~~~~~~~~~~~~~~~~ 341 (521)
.+........ ....++............ .++.++... ..+.... +++++++.++...+...+..++.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ll~~~~fl~~~~~~~~~~~g~ 314 (509)
T KOG2504|consen 235 LRNSAASVESTPKPVELRISERDSGLKKLSLSNLATLKRGPDKWRNSPLQAFLSMLDLSLLKDPKFLLLALSNLFAYLGF 314 (509)
T ss_pred hccccccccccccccccccccCCCCCCcccccchhhhhhCCccccccchhhhhhhhhHHHHcCchHHHHHHHHHHHHHHH
Confidence 0000000000 000000000000000000 000000000 1111122 57899988777777777777777
Q ss_pred HHHHHhHHhhccCCCccH---HHHHHHHHHHhHhHHHHHHHHHhhcC--CchHHHHHHHHHHHHHHHHHhcCCchHHHHH
Q 039541 342 GVVYFGLLLGVGNLSFNI---YLSLAFNGLLDIPAYLLTFILIERWS--RKSSILTFCILSGTCSAICVAIGDEQEVLQI 416 (521)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~g~l~dr~g--~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 416 (521)
...++.++.+..+.+.+. .....+.++..++++++.|++.|+.. ++.+..++.++.+++.+.+.+.... +.++
T Consensus 315 ~~p~~~l~~~~~~~g~~~~~aa~l~Siigi~~i~gRi~~G~laD~~~~~~~~~~~~~ll~~gl~~~~~p~~~~~--~~l~ 392 (509)
T KOG2504|consen 315 NVPFVYLPSYAKSLGLSSNDAAFLLSIIGVSDIIGRIILGLLADKPGIRALVLFLLTLLIAGLARLFLPFATTY--VGLI 392 (509)
T ss_pred HHHHHHHHHHHhhcCCChhhhHHHHHHHHHhhhhhhhhhhhhcCccccchHHHHHHHHHHHHHHHHHHHHhccH--HHHH
Confidence 777777777777777653 44556677888999999999999987 4445556666666666555554444 6778
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccccCchhhhhhhHHHHHhhhhhhhHHHHHHHhh---ccchhHHHHHHHHHHHHHhHhh
Q 039541 417 GLELASFFSACVAFNVLLVFGTELFTTCVRNSTTSLVRQAVNLGAAFSPVLISAG---RQNEFLSFGVFGLVVFCFGFFV 493 (521)
Q Consensus 417 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 493 (521)
...+++|+..+.........+.|..+.+.-..+.|+...+..++..++|.+.|+. ..++...|...+++.+++.+.+
T Consensus 393 ~~~~~fG~~~g~~~~l~~~i~~~~~g~~~l~~a~Gl~l~~~gi~~l~gpPiag~~~d~tg~Y~~~f~~~g~~~~~s~~~~ 472 (509)
T KOG2504|consen 393 VFSILFGFCVGSFSSLTPVILVDLVGLEKLSNAYGLLLLFQGIGALVGPPIAGLLYDITGNYDHAFYFCGLCFLLSAVLL 472 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcChhhcchHHHHHHHHhHHHHHcCcccceeeeeccCCeeeehhhcChHHHHHHHHH
Confidence 8888899998888888888999999999999999999999999999999999862 3457788888888888888777
Q ss_pred hccc
Q 039541 494 VFLP 497 (521)
Q Consensus 494 ~~~~ 497 (521)
+..+
T Consensus 473 ~~~~ 476 (509)
T KOG2504|consen 473 LILR 476 (509)
T ss_pred HHhH
Confidence 6665
No 75
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.95 E-value=1.2e-25 Score=220.59 Aligned_cols=342 Identities=15% Similarity=0.150 Sum_probs=222.0
Q ss_pred cceeeecceeeCCccccchhhHHHHHH-HHHHhhhhhhhccccCCCCchHHH-HHHHHHHHHHHHHHhccccHHHHHHHH
Q 039541 102 TTIISDWSLECAGSSILSGLPSSCFFI-GCLLGGLALSTLGDSSSLGRKKLL-FLSCFAMSITALATIFANNIWIYSTIR 179 (521)
Q Consensus 102 ~~i~~~~~~~~~~~~~~~~~~~s~~~l-g~~i~~~~~g~l~dr~~~Grr~~l-~~~~~~~~~~~~~~~~~~~~~~l~~~r 179 (521)
+.+.+++|++.++. |++.+...+ +..++.++.|+ +|| +||||.+ ..+.++.+++.++.+++++++.+++.+
T Consensus 40 ~~l~~~~~~s~~~~----g~~~~~~~~~~~~~~~~~~~~-~dr--~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 112 (393)
T PRK15011 40 IFLTDEVHARPAMV----GFFFTGSAVIGILVSQFLAGR-SDK--RGDRKSLIVFCCLLGVLACTLFAWNRNYFVLLFVG 112 (393)
T ss_pred HHHHhhcCCCHHHH----HHHHHHHHHHHHHHHHHHHHH-Hhc--ccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 34678999999666 999776555 66666666666 999 9999875 456666678888888999999887665
Q ss_pred HHhhccchhhHhhhhhheeeeecCcch--hHHHHHHHHHHHHHHHHHHHH-HHhhcCCchhHHHHHHHHHHHHHHhhhce
Q 039541 180 FVAGFFRAPIMTSVIVLLSEMVSKRWR--GQVVIIGFTFFSFGLVSLPAV-AYLSRGSSWKMLYVWTSIPSIVCCIIIYP 256 (521)
Q Consensus 180 ~l~G~~~g~~~~~~~~~i~~~~~~~~r--g~~~~~~~~~~~~G~~i~~~i-~~~~~~~~wr~~f~~~~~~~~~~~~~~~~ 256 (521)
.+.|...+...+...+++.|+.++++| +...++.+.+.++|.+++|++ +.+.++.|||..|++.++..++..++.++
T Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~g~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~ 192 (393)
T PRK15011 113 VFLSSFGSTANPQMFALAREHADKTGREAVMFSSFLRAQVSLAWVIGPPLAYALAMGFSFTVMYLSAAVAFIVCGVMVWL 192 (393)
T ss_pred HHHHHHHHhhHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHhhHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHh
Confidence 554444456788888888888776655 345678889999999999999 56667789999999998888777756667
Q ss_pred eeecchhHHHhcCCHHHHHHHHHHHhhhcCCCCCCCccccccCCCCCccccCCCcccccccHHHHhccHHHHHHHHHHHH
Q 039541 257 FISESPRWLFIHGHEAEAMAVLKRLASRSNYQSDYGLESCCLSNMPPKAKNVIPKLDLYSSLKDLFNRKWALRRLLTIMA 336 (521)
Q Consensus 257 ~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 336 (521)
++||+++. +++ + + . +. + ..++ +.+..+........
T Consensus 193 ~~~~~~~~---~~~--~---------~-~------------------~~-~---------~~~~--~~~~~~~~~~~~~~ 227 (393)
T PRK15011 193 FLPSMRKE---LPL--A---------T-G------------------TL-E---------APRR--NRRDTLLLFVICTL 227 (393)
T ss_pred hcCccCCC---Ccc--c---------c-c------------------cc-c---------cccc--ccccHHHHHHHHHH
Confidence 77876421 000 0 0 0 00 0 0000 00111122222222
Q ss_pred HHHHHHHHHHhHHhhc-cCCCccHHHHH---HHHHHHhHhHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHhcCCchH
Q 039541 337 LAFGIGVVYFGLLLGV-GNLSFNIYLSL---AFNGLLDIPAYLLTFILIERWSRKSSILTFCILSGTCSAICVAIGDEQE 412 (521)
Q Consensus 337 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~---~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~i~~~~~~~~~~~~~ 412 (521)
.+..........|.+. +..+.+..... ....+..+++.++.|+++||++||+.+..+.....+....+.... . .
T Consensus 228 ~~~~~~~~~~~~p~~l~~~~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~-~-~ 305 (393)
T PRK15011 228 MWGTNSLYIINMPLFIINELHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRLGKRFLMRVAAVAGVCFYAGMLMAH-S-P 305 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHh-h-H
Confidence 2222222223344444 34555543332 233455667889999999999999987776655554443333222 1 2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccccCchhhhhhhHHHHHhhhhhhhHHHHHHHhh--ccchhHHHHHHHHHHHHHh
Q 039541 413 VLQIGLELASFFSACVAFNVLLVFGTELFTTCVRNSTTSLVRQAVNLGAAFSPVLISAG--RQNEFLSFGVFGLVVFCFG 490 (521)
Q Consensus 413 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~~--~~~~~~~~~~~~~~~~~~~ 490 (521)
+...+..++.+++.+...+....+..|.+|++ |+++.++.+...++|..++|.+.|.. ..++...+.+.+++.+++.
T Consensus 306 ~~~l~~~~l~~~~~g~~~~~~~~~~~~~~p~~-~g~~~~~~~~~~~lg~~~g~~l~G~i~~~~g~~~~~~~~~~~~~~~~ 384 (393)
T PRK15011 306 AILLGLQLLNAIYIGILGGIGMLYFQDLMPGQ-AGSATTLYTNTSRVGWIIAGSLAGIVAEIWNYHAVFWFALVMIIATL 384 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCC-cchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHH
Confidence 33444445555555665666677788888865 89999999988999999999999863 2356666666666666666
Q ss_pred Hhhhcccc
Q 039541 491 FFVVFLPE 498 (521)
Q Consensus 491 ~~~~~~~~ 498 (521)
+.++.+||
T Consensus 385 ~~~~~~~~ 392 (393)
T PRK15011 385 FCLLRIKD 392 (393)
T ss_pred HHHHhhcC
Confidence 66666554
No 76
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.95 E-value=3e-26 Score=222.14 Aligned_cols=317 Identities=14% Similarity=0.049 Sum_probs=230.3
Q ss_pred CCCcceeeecceeeCCccccchhhHHHHHHHHHHhhhhhhhccccCCCCchHHHHHHHHHHHHHHHHHhccccHHHHHHH
Q 039541 99 PSDTTIISDWSLECAGSSILSGLPSSCFFIGCLLGGLALSTLGDSSSLGRKKLLFLSCFAMSITALATIFANNIWIYSTI 178 (521)
Q Consensus 99 ~~~~~i~~~~~~~~~~~~~~~~~~~s~~~lg~~i~~~~~g~l~dr~~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~ 178 (521)
|.+|.+.+++|++.++. |++.+.+.++..+++++.|+++|| +|||+++.++.++..++.+.+ .+++++.+++.
T Consensus 21 ~~lp~l~~~~~~s~~~~----g~~~s~~~~~~~~~~~~~g~l~dr--~g~r~~~~~~~~~~~~~~~~~-~~~~~~~l~~~ 93 (355)
T TIGR00896 21 PLLPQIRSALGMSFSVA----GLLTALPVLCFAVLAPLAPWLARR--FGEERSVAAGLLLIAAGILIR-SAPGTALLFAG 93 (355)
T ss_pred ccHHHHHHHhCCCHHHH----HHHHHHHHHHHHHHHHhHHHHHHH--hCchHHHHHHHHHHHHHHHHH-HhccHHHHHHH
Confidence 44899999999999776 999999999999999999999999 999999999999988888887 78899999999
Q ss_pred HHHhhccchhhHhhhhhheeeeecCcchhHHHHHHHHHHHHHHHHHHHH-HHhhcCC--chhHHHHHHHHHHHHHHhhhc
Q 039541 179 RFVAGFFRAPIMTSVIVLLSEMVSKRWRGQVVIIGFTFFSFGLVSLPAV-AYLSRGS--SWKMLYVWTSIPSIVCCIIIY 255 (521)
Q Consensus 179 r~l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~i~~~i-~~~~~~~--~wr~~f~~~~~~~~~~~~~~~ 255 (521)
|++.|++.+...+....++.|++| ++|++++++.+.+..+|..+++.+ +.+.+.. +||+.|.+.++..++.. .
T Consensus 94 ~~~~g~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~~~~w~~~f~~~~~~~~~~~-~-- 169 (355)
T TIGR00896 94 TALIGVGIAIINVLLPSLIKRDFP-QRVGLMTGLYSMALMGGAALAAAATVPLAQHSGGHWQQALAWWALPALLAL-L-- 169 (355)
T ss_pred HHHHHHHHHHHhccchHHHHHhCc-chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHH-H--
Confidence 999999999888888888889886 689999999999999999999888 4554443 49999887766544433 2
Q ss_pred eeeecchhHHHhcCCHHHHHHHHHHHhhhcCCCCCCCccccccCCCCCccccCCCcccccccHHHHhccHHHHHHHHHHH
Q 039541 256 PFISESPRWLFIHGHEAEAMAVLKRLASRSNYQSDYGLESCCLSNMPPKAKNVIPKLDLYSSLKDLFNRKWALRRLLTIM 335 (521)
Q Consensus 256 ~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 335 (521)
.++|+.++ +. + .+. + .. ....++++|+|.++...+...
T Consensus 170 ~~~~~~~~------~~-----------~-~~~-------------------~-~~----~~~~~~~~~~~~~~~~~~~~~ 207 (355)
T TIGR00896 170 AWIPQVRR------RV-----------A-ANQ-------------------T-TT----RLTPVRIWRSPLAWQVTVFFG 207 (355)
T ss_pred HHhhhhcc------cc-----------C-CCC-------------------C-CC----CCCCchhhcCHhHHHHHHHHH
Confidence 22343221 00 0 000 0 00 013345677877655444433
Q ss_pred HHHHHHHHHHHhHHhhccCCCccHHH---HHHHHHHHhHhHHHHHHHHHhhc-CCchHHHHHHHHHHHHHHHHHhcCCch
Q 039541 336 ALAFGIGVVYFGLLLGVGNLSFNIYL---SLAFNGLLDIPAYLLTFILIERW-SRKSSILTFCILSGTCSAICVAIGDEQ 411 (521)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~g~l~dr~-g~~~~~~~~~~~~~i~~~~~~~~~~~~ 411 (521)
+............|.++++.+.+... ......++.++++++.|++.||+ +||+.+.++..+.+++.+.+.+.....
T Consensus 208 ~~~~~~~~~~~~lp~~~~~~g~~~~~~g~~~~~~~~~~i~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (355)
T TIGR00896 208 LQSGLYYSLIGWLPAILISHGASAATAGSLLALMQLAQAASALLIPALARRVKDQRGIVAVLAVLQLVGLCGLLFAPMHG 287 (355)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHhhhhH
Confidence 33333333334456666666665433 33455678889999999999999 566666677777777666565544332
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcccc-CchhhhhhhHHHHHhhhhhhhHHHHHHHhh
Q 039541 412 EVLQIGLELASFFSACVAFNVLLVFGTELF-TTCVRNSTTSLVRQAVNLGAAFSPVLISAG 471 (521)
Q Consensus 412 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~r~~~~~~~~~~~~~g~~~~p~~~~~~ 471 (521)
.. ...++.+++.+..++.......+.. +++.++...++.+....++.+++|.+.|+.
T Consensus 288 --~~-~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~gp~~~G~l 345 (355)
T TIGR00896 288 --LW-AWALVLGLGQGGAFPLALTLIGLRSRQAAQAAALSAMAQSIGYLLAALGPLFVGVL 345 (355)
T ss_pred --HH-HHHHHHHHhhhhHhHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11 2456678888888887766665544 456778999999988999999999999863
No 77
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.95 E-value=5.4e-26 Score=223.86 Aligned_cols=349 Identities=12% Similarity=0.002 Sum_probs=236.9
Q ss_pred CcceeeecceeeCCccccchhhHHHHHHHHHHhhhhhhhccccCCCCc-hHHHHHHHHHHHHHHHHHhccccHHHHHHHH
Q 039541 101 DTTIISDWSLECAGSSILSGLPSSCFFIGCLLGGLALSTLGDSSSLGR-KKLLFLSCFAMSITALATIFANNIWIYSTIR 179 (521)
Q Consensus 101 ~~~i~~~~~~~~~~~~~~~~~~~s~~~lg~~i~~~~~g~l~dr~~~Gr-r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r 179 (521)
.+.+.+++|++.++. |++.+++.++..++++++|.++|| +|| |+++.++.++..++..+..+.++++.+++.|
T Consensus 26 ~~~l~~~~g~s~~~i----Gl~~a~~~~~~~i~~~~~g~l~dr--~g~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (418)
T TIGR00889 26 GSYMSKTLHFSGAEI----GWVYSSTGIAAILMPILVGIIADK--WLSAQKVYAVCHFAGALLLFFAAQVTTPAGMFPVL 99 (418)
T ss_pred HHHHHHhcCCCHHHH----HHHHHHHHHHHHHHHHHHHHHHHH--hcccHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHH
Confidence 567778899999666 999999999999999999999999 965 7788888888889998999999999999999
Q ss_pred HHhhccchhhHhhhhhhe----e----eeecCcchhHHHHHHHHHHHHHHHHHHHHHHhhc-CCchhHHHHHHHHHHHHH
Q 039541 180 FVAGFFRAPIMTSVIVLL----S----EMVSKRWRGQVVIIGFTFFSFGLVSLPAVAYLSR-GSSWKMLYVWTSIPSIVC 250 (521)
Q Consensus 180 ~l~G~~~g~~~~~~~~~i----~----~~~~~~~rg~~~~~~~~~~~~G~~i~~~i~~~~~-~~~wr~~f~~~~~~~~~~ 250 (521)
++.|++.+...+...++. . |......|.+..| .+|.+++|.++.... ...|+ +|++.++..++.
T Consensus 100 ~l~~~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~~r~~G------~lG~~ig~~l~g~l~~~~~~~-~f~~~~~~~~~~ 172 (418)
T TIGR00889 100 LANSLAYMPTIALTNSISYANLPQAGLDVVTDFPPIRVMG------TIGFIAAMWAVSLLDIELSNI-QLYITAGSSALL 172 (418)
T ss_pred HHHHHHHccHHHHHHHHHHHHHhhcCCCchhcCCCeeeeh------hHHHHHHHHHHHHhcccchhH-HHHHHHHHHHHH
Confidence 999998776666555442 2 3333334555555 367777777743333 22354 455666666665
Q ss_pred HhhhceeeecchhHHHhcCCHHHHHHHHHHHhhhcCCCCCCCccccccCCCCCccccCCCcccccccHHHHhccHHHHHH
Q 039541 251 CIIIYPFISESPRWLFIHGHEAEAMAVLKRLASRSNYQSDYGLESCCLSNMPPKAKNVIPKLDLYSSLKDLFNRKWALRR 330 (521)
Q Consensus 251 ~~~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 330 (521)
. +..+++||+|+. +++.++. .++ ....+.++++|+|.++..
T Consensus 173 ~-~~~~~~~e~~~~---~~~~~~~---~~~--------------------------------~~~~~~~~~~k~~~~~~~ 213 (418)
T TIGR00889 173 G-VFALTLPDIPVA---KSTAKMS---IKV--------------------------------MLGLDAFILFKNKRMAIF 213 (418)
T ss_pred H-HHHhcCCCCCCC---ccccccC---HHH--------------------------------HhhhhHHHHhcCCCeeeH
Confidence 5 445677887521 0000000 000 000134567788876655
Q ss_pred HHHHHHHHHHHHHHHHhHHhhccCCCcc-----------HHHHHHHHHHHhHhHHHHHHHHHhhcCCchHHHHHHHHHHH
Q 039541 331 LLTIMALAFGIGVVYFGLLLGVGNLSFN-----------IYLSLAFNGLLDIPAYLLTFILIERWSRKSSILTFCILSGT 399 (521)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~i 399 (521)
++..++........+...+.+.++.+.+ ......+..+..+++.++.+++.||+|+|+++..+.++.++
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r~~l~~~~~~~~v 293 (418)
T TIGR00889 214 FFFSMLLGAPLQITNIFGNGFLHEFGRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRFGIKKVMLLSLVAWAL 293 (418)
T ss_pred HHHHHHHHhHHHHHHHhHHHHHHHhcccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHH
Confidence 5555554443333333334444443322 13334455567778889999999999999999999998888
Q ss_pred HHHHHHhcCCch--HHHHHHHHHHHHHHHHHHHHHHHHhhccccCchhhhhhhHHHH-HhhhhhhhHHHHHHHhhc----
Q 039541 400 CSAICVAIGDEQ--EVLQIGLELASFFSACVAFNVLLVFGTELFTTCVRNSTTSLVR-QAVNLGAAFSPVLISAGR---- 472 (521)
Q Consensus 400 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~-~~~~~g~~~~p~~~~~~~---- 472 (521)
...++....... .+..++..++.+++.+...+....++.|.+|++.|+++.|+.+ ....+|.+++|.+.|...
T Consensus 294 ~~~l~~~~~~~~~~~~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p~~~~g~~~g~~~~~~~~lg~~iGp~l~G~l~~~~g 373 (418)
T TIGR00889 294 RFGFFAYGDPEYFGYALLFLSMIVYGCAFDFFNISGSVFVEKEVPVHIRASAQGLFTLMCNGFGSLLGYILSGVMVEKMF 373 (418)
T ss_pred HHHHHHHcCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhc
Confidence 766665532221 1334556677777777777888899999999999999999997 567899999999998621
Q ss_pred ----cchhHHHHHHHHHHHHHhHh-hhccccCCC
Q 039541 473 ----QNEFLSFGVFGLVVFCFGFF-VVFLPETIG 501 (521)
Q Consensus 473 ----~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 501 (521)
.++...|.+.+++.+++.++ .++++|+++
T Consensus 374 ~~~~~~~~~~f~~~~~~~~i~~~l~~~~~~~~~~ 407 (418)
T TIGR00889 374 AYGTFDWQTMWLFFAGYIAILAVLFMIFFKYSHN 407 (418)
T ss_pred cccCCchHHHHHHHHHHHHHHHHHHHHHhCCccc
Confidence 23566777777776666554 455565543
No 78
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.95 E-value=1.9e-25 Score=223.04 Aligned_cols=326 Identities=14% Similarity=0.065 Sum_probs=236.3
Q ss_pred CcceeeecceeeCCccccchhhHHHHHHHHHHhhhhhhhccccC--CCCch-HHHHHHHHHHHHHHHHHhcccc------
Q 039541 101 DTTIISDWSLECAGSSILSGLPSSCFFIGCLLGGLALSTLGDSS--SLGRK-KLLFLSCFAMSITALATIFANN------ 171 (521)
Q Consensus 101 ~~~i~~~~~~~~~~~~~~~~~~~s~~~lg~~i~~~~~g~l~dr~--~~Grr-~~l~~~~~~~~~~~~~~~~~~~------ 171 (521)
.+.+.+++|++..+. |++.++..+..++..|+.|+++||+ |+||| +.++.+....+++.+++.+.++
T Consensus 23 ~~~~~~~~g~s~~~~----g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~i~~~~~~~~~~~~~~~~ 98 (437)
T TIGR00792 23 LFFYTDVLGLSAAFV----GTLFLVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFSIVLVLLFTTPDFSATGK 98 (437)
T ss_pred HHHHHHccCCCHHHH----HHHHHHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHHHHHHHHHHhCCCCCcchH
Confidence 566778899999666 9999999999999999999999985 57884 4677788888888888877654
Q ss_pred HHHHHHHHHHhhccchhhHhhhhhheeeee-cCcchhHHHHHHHHHHHHHHHHHHHH-HHhh-------cCCchhHHHHH
Q 039541 172 IWIYSTIRFVAGFFRAPIMTSVIVLLSEMV-SKRWRGQVVIIGFTFFSFGLVSLPAV-AYLS-------RGSSWKMLYVW 242 (521)
Q Consensus 172 ~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~-~~~~rg~~~~~~~~~~~~G~~i~~~i-~~~~-------~~~~wr~~f~~ 242 (521)
...+++.+++.+++.+...+...++..|.. ++++|++..++.+.+..+|.++++.+ +.+. +..+||+.+++
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~R~~~~~~~~~~~~~g~~l~~~~~~~l~~~~~~~~~~~g~~~~~~i 178 (437)
T TIGR00792 99 LVYAYITYILLGLFYSFVNIPYWSLVPAITLDPRERESLSTFRRFGATLGGLLVAVIVLPLVSYFGGGDDKFGWFMFALV 178 (437)
T ss_pred HHHHHHHHHHHHHHHHhhcccHhhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccccHHHHHHH
Confidence 456677888889888887777788889987 56899999999988888887766544 3222 24689999999
Q ss_pred HHHHHHHHHhhhceeeecchhHHHhcCCHHHHHHHHHHHhhhcCCCCCCCccccccCCCCCccccCCCcccccccHHHHh
Q 039541 243 TSIPSIVCCIIIYPFISESPRWLFIHGHEAEAMAVLKRLASRSNYQSDYGLESCCLSNMPPKAKNVIPKLDLYSSLKDLF 322 (521)
Q Consensus 243 ~~~~~~~~~~~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 322 (521)
.+++.++..++.++..||+++. +.++ ++++.+..+.++.++
T Consensus 179 ~~~l~~~~~~~~~~~~~e~~~~-----~~~~----------------------------------~~~~~~~~~~~~~l~ 219 (437)
T TIGR00792 179 LALIGVVSLIICFFGTKERYSE-----IPKN----------------------------------IEKKLSLKQIFKALF 219 (437)
T ss_pred HHHHHHHHHHHHHcCCEecCCC-----CCcc----------------------------------cccCCCHHHHHHHHh
Confidence 9988888775666777775410 0000 000001123567888
Q ss_pred ccHHHHHHHHHHHHHHHHHHHHHHhHHhhccCC-Ccc--HHHHHHHHHHHhHhHHHHHHHHHhhcCCchHHHHHHHHHHH
Q 039541 323 NRKWALRRLLTIMALAFGIGVVYFGLLLGVGNL-SFN--IYLSLAFNGLLDIPAYLLTFILIERWSRKSSILTFCILSGT 399 (521)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~i 399 (521)
++|.++...+..++.+..........+++.+.. +.. ......+..++.+++.++.+++.||+|+|+.+..+..+.++
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~~~~~~~~~~~~~ 299 (437)
T TIGR00792 220 KNDQLLILCLAYLFYNLAFNIKNGVQVYYFTYVLGDPELFSYMGSIAIVAGLIGVLLFPRLVKKFGRKILFAGGILLMVL 299 (437)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHcchhheeEeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHH
Confidence 999877665555555554443333334444322 211 12233445677888999999999999999999998888887
Q ss_pred HHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHHHHHhhccccC-------chhhhhhhHHHHHhhhhhhhHHHHHHHh
Q 039541 400 CSAICVAIGDEQEVLQIGLELASFFSACVAFNVLLVFGTELFT-------TCVRNSTTSLVRQAVNLGAAFSPVLISA 470 (521)
Q Consensus 400 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~r~~~~~~~~~~~~~g~~~~p~~~~~ 470 (521)
+.+.+.+... +.+...+..++.+++.+...+..+++.+|..+ ++.+|.+.|+.+....+|..+++.+.+.
T Consensus 300 ~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg~~i~g~ 376 (437)
T TIGR00792 300 GYLIFFFAGS-NLPLILVLIILAGFGQNFVTGLVWALVADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQALAGFLVGL 376 (437)
T ss_pred HHHHHHHcch-hHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCccchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7766655432 22445566677788888888888999888865 4567999999999999999999988874
No 79
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.95 E-value=4e-25 Score=217.67 Aligned_cols=346 Identities=13% Similarity=0.102 Sum_probs=234.9
Q ss_pred CcceeeecceeeCCccccchhhHHHHHHHHHHhhhhhhhccccCCC-----CchH-HHHHHHHHHHHHHHHHhcc---cc
Q 039541 101 DTTIISDWSLECAGSSILSGLPSSCFFIGCLLGGLALSTLGDSSSL-----GRKK-LLFLSCFAMSITALATIFA---NN 171 (521)
Q Consensus 101 ~~~i~~~~~~~~~~~~~~~~~~~s~~~lg~~i~~~~~g~l~dr~~~-----Grr~-~l~~~~~~~~~~~~~~~~~---~~ 171 (521)
+|.+-++.|++.++. |++..+... .+..+++|+++|| + |||| .++++.++.+++..+.++. ++
T Consensus 22 ~~~~l~~~g~~~~~i----g~~~~~~~~--~~~~~l~g~~~Dr--~~~~~~g~rr~~l~~~~~~~~l~~~~l~~~~~~~~ 93 (402)
T PRK11902 22 LQAWMTVEGLDIQTI----GFFSLVGQA--YIFKFLWAPLMDR--YTPPLLGRRRGWLLLTQVGLAASIAAMAFCPPHAA 93 (402)
T ss_pred HHHHHHHcCCCHHHH----HHHHHHHHH--HHHHHHHHHHHHc--ccccCCCcchhHHHHHHHHHHHHHHHHHhcCccch
Confidence 788888899999777 998777665 5899999999999 9 8875 7888888888888887776 45
Q ss_pred HHHHHHHHHHhhccchhhHhhhhhheeeeecCcchhHHHHHHHHHHHHHHHHHHHH-HHhhcC-CchhHHHHHHHHHHHH
Q 039541 172 IWIYSTIRFVAGFFRAPIMTSVIVLLSEMVSKRWRGQVVIIGFTFFSFGLVSLPAV-AYLSRG-SSWKMLYVWTSIPSIV 249 (521)
Q Consensus 172 ~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~i~~~i-~~~~~~-~~wr~~f~~~~~~~~~ 249 (521)
++.+++..++.++..+...+...+++.|++|+++|+++.++...+..+|.++++.+ +.+.+. .|||..|++.++..++
T Consensus 94 ~~~l~~~~~~~~~~~~~~~~~~~al~~~~~~~~~r~~~~~~~~~g~~~g~i~g~~l~~~l~~~~~gw~~~f~i~a~~~l~ 173 (402)
T PRK11902 94 LWPLAGLAVLVAFLSASQDIVFDAYSTDVLHPEERGAGAAVKVLGYRLAMLVSGGLALWLADRVLGWGNTYLLMAGLMLA 173 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhhHHHHHHHHHHHHHHHHHhHHHHHHHhcccCHHHHHHHHHHHHHH
Confidence 78888888888998898999999999999999999999999999999999998887 555554 5999999998887776
Q ss_pred HHhhhceeeecchhHHHhcCCHHHHHHHHHHHhhhcCCCCCCCccccccCCCCCccccCCCcccccccHHHHhccHHHHH
Q 039541 250 CCIIIYPFISESPRWLFIHGHEAEAMAVLKRLASRSNYQSDYGLESCCLSNMPPKAKNVIPKLDLYSSLKDLFNRKWALR 329 (521)
Q Consensus 250 ~~~~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 329 (521)
.. +..+++||+++. +++.++.++ + ...++++++++|.++.
T Consensus 174 ~~-l~~~~~~e~~~~---~~~~~~~~~---~---------------------------------~~~~~~~l~~~~~~~~ 213 (402)
T PRK11902 174 GA-LTTLWAPEPEVP---ARPPRSLGE---A---------------------------------VVGPLRDFFSRRGAWA 213 (402)
T ss_pred HH-HHHHhcCCCccc---ccccchhHH---H---------------------------------HHHHHHHHHhCcCHHH
Confidence 65 444566775431 000000000 0 0125677889988766
Q ss_pred HHHHHHHHHHHHHHH-HHhHHhhccCCCccHHHHHHHH---H-HHhHhHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHH
Q 039541 330 RLLTIMALAFGIGVV-YFGLLLGVGNLSFNIYLSLAFN---G-LLDIPAYLLTFILIERWSRKSSILTFCILSGTCSAIC 404 (521)
Q Consensus 330 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~i~~~~~ 404 (521)
.++...+........ .+..+++.++.+.+........ + ++.+++.++++++.||+++|+.+..+..+..+..+.+
T Consensus 214 ~l~~~~l~~~~~~~~~~~~~~~l~~~~G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r~g~~~~l~~~~~~~~l~~l~~ 293 (402)
T PRK11902 214 LLLLIVLYKLGDAFAGSLSTTFLIRGAGFSAGEVGIVNKTLGLAATIVGALAGGTLMVRLGLYRSLMLFGVLQAVSNLGY 293 (402)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHH
Confidence 555544444433222 2333445555666655444332 2 3467889999999999999988777666655554333
Q ss_pred H---hcCCchHHHHHHHH----HHHHHHHHHHHHHHHHhhccccCchhhhhhhHHHHHhhhhhhhHHHHHHHh--hccch
Q 039541 405 V---AIGDEQEVLQIGLE----LASFFSACVAFNVLLVFGTELFTTCVRNSTTSLVRQAVNLGAAFSPVLISA--GRQNE 475 (521)
Q Consensus 405 ~---~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~--~~~~~ 475 (521)
. ...+. .+...... +..++..+...+....++.+.+|.+.++ +......++..+++.+.|. ...++
T Consensus 294 ~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~l~~~~~~~~~G~l~~~~G~ 368 (402)
T PRK11902 294 WVLAVTPKH-LWTMALAIGIENLCGGMGTAAFVALLMALCNRSFSATQYA----LLSALASVGRVYVGPTSGYLVEAYGW 368 (402)
T ss_pred HHHHhcCCc-HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHH----HHHHHHHHHHHHHHHHHHHHHHHhCh
Confidence 2 22222 13333333 3445556666777888888888866654 3444445555544445554 33456
Q ss_pred hHHHHHHHHHHHHHhHhhhccccC
Q 039541 476 FLSFGVFGLVVFCFGFFVVFLPET 499 (521)
Q Consensus 476 ~~~~~~~~~~~~~~~~~~~~~~~~ 499 (521)
...|.+.+++++++.++....+.+
T Consensus 369 ~~~f~~~~~~~~~~~~~~~~~~~~ 392 (402)
T PRK11902 369 PGFYLMTVVIALPGLALLWLMRGT 392 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhh
Confidence 777777777777766655544433
No 80
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.95 E-value=3.7e-25 Score=216.38 Aligned_cols=337 Identities=13% Similarity=0.026 Sum_probs=233.7
Q ss_pred CcceeeecceeeCCccccchhhHHHHHHHHHHhhhhhhhccccCCCCch----HHHHHHHHHHHHHHHHHhccccHHHHH
Q 039541 101 DTTIISDWSLECAGSSILSGLPSSCFFIGCLLGGLALSTLGDSSSLGRK----KLLFLSCFAMSITALATIFANNIWIYS 176 (521)
Q Consensus 101 ~~~i~~~~~~~~~~~~~~~~~~~s~~~lg~~i~~~~~g~l~dr~~~Grr----~~l~~~~~~~~~~~~~~~~~~~~~~l~ 176 (521)
+|.+.+++|.+.++. |++.+++.++..++++++|+++|| +||| +.+.++..+. .......+++++.++
T Consensus 27 l~~~l~~~g~s~~~i----G~~~~~~~l~~~l~~~~~g~l~dr--~g~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~ 98 (382)
T PRK11128 27 WSVWLKGQGYTPETI----GLLLGAGLVARFLGSLLIAPRVKD--PSQLIPALRLLALLTLLF--AVAFWFGAHSFWLLF 98 (382)
T ss_pred HHHHHHhcCCCHHHH----HHHHHHHHHHHHhhhHHHHHHHhh--hcchHHHHHHHHHHHHHH--HHHHHHhcccHHHHH
Confidence 677788999999666 999999999999999999999999 9994 3333222222 223344568999999
Q ss_pred HHHHHhhccchhhHhhhhhheeeeecCcchhHHHHHHHHHHHHHHHHHHHH-HHhhcCCchhHHHHHHHHHHHHHHhhhc
Q 039541 177 TIRFVAGFFRAPIMTSVIVLLSEMVSKRWRGQVVIIGFTFFSFGLVSLPAV-AYLSRGSSWKMLYVWTSIPSIVCCIIIY 255 (521)
Q Consensus 177 ~~r~l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~i~~~i-~~~~~~~~wr~~f~~~~~~~~~~~~~~~ 255 (521)
+.|++.|++.+...+...+++.++ +++|+++.+......++|.++||++ +.+.+++|||..|++.++..++.. +..
T Consensus 99 i~~~l~g~~~~~~~~~~~a~~~~~--~~~~~~a~~~~~~~~~lg~~igp~lgg~l~~~~g~~~~f~~~~~~~~~~~-~~~ 175 (382)
T PRK11128 99 VAIGLFNLFFSPLVPLTDALANTW--QKQIGLDYGKVRLWGSIAFVIGSALTGKLVSWFGEQAILWILTAGVASML-LGQ 175 (382)
T ss_pred HHHHHHHHHHcccccHHHHHHHHH--HhhccCCcchHHHHHHHHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHHH-HHH
Confidence 999999999888888888877776 4678888999999999999999999 567777899999998776555444 333
Q ss_pred eeeecchhHHHhcCCHHHHHHHHHHHhhhcCCCCCCCccccccCCCCCccccCCCcccccccHHHHhccHHHHHHHHHHH
Q 039541 256 PFISESPRWLFIHGHEAEAMAVLKRLASRSNYQSDYGLESCCLSNMPPKAKNVIPKLDLYSSLKDLFNRKWALRRLLTIM 335 (521)
Q Consensus 256 ~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 335 (521)
++.||.++ +++.++ + ..+...++++++|+|.++...+..+
T Consensus 176 ~~~~~~~~----~~~~~~---------------------------------~---~~~~~~~~~~i~~~~~~~~~~~~~~ 215 (382)
T PRK11128 176 LLRPTIMP----QGESRQ---------------------------------Q---ESAGWPAWKALLKEPTVWRFLLCVS 215 (382)
T ss_pred HccCCCCC----cccccc---------------------------------c---cccccchHHHHHcChhHHHHHHHHH
Confidence 34444311 000000 0 0001136788999998877666666
Q ss_pred HHHHHHHHHHHhHHhhccCCCccHHHHH---HHHHHHhHhHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHhcCCchH
Q 039541 336 ALAFGIGVVYFGLLLGVGNLSFNIYLSL---AFNGLLDIPAYLLTFILIERWSRKSSILTFCILSGTCSAICVAIGDEQE 412 (521)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~i~~~~~~~~~~~~~ 412 (521)
+........+...+.+.++.+.+..... .+..+..++..++.+++.||+++|+.+..+....++..+.+...++ .
T Consensus 216 l~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~l~~~~~~~~~~~~~~~~~~~--~ 293 (382)
T PRK11128 216 LLQGSHAAYYGFSAIYWQAAGYSASTIGYLWSLGVVAEVLIFAFSNRLFRRWSARDLLLLSAICGVVRWGLMGSTTA--L 293 (382)
T ss_pred HHHHHhHhHHHHHHHHHHHCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhhh--H
Confidence 5555544343344455555665543333 3344566777788999999999999998888888887666654432 2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccccCchhhhhhhHHHHHh-hhhhhhHHHHHHHhhccc-hhHHHHHHHHHHHHHh
Q 039541 413 VLQIGLELASFFSACVAFNVLLVFGTELFTTCVRNSTTSLVRQA-VNLGAAFSPVLISAGRQN-EFLSFGVFGLVVFCFG 490 (521)
Q Consensus 413 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~-~~~g~~~~p~~~~~~~~~-~~~~~~~~~~~~~~~~ 490 (521)
+..++..++.+++.+...+....+..+. +++++++..++.+.. ..+|..++|.+.|...+. ....+...+++.+++.
T Consensus 294 ~~~~~~~~l~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~ig~~i~G~l~~~~g~~~~~~~~~~~~~~~ 372 (382)
T PRK11128 294 PWLIVIQILHCGTFTVCHLAAMRYIAAR-PGSEVIRLQALYSALAMGGSIAIMTVLSGFLYQHLGAGVFWVMALVALPAL 372 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHC-CHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHH
Confidence 5566677888888888778888887776 555568888887644 466778999999873221 2244555555555443
Q ss_pred H
Q 039541 491 F 491 (521)
Q Consensus 491 ~ 491 (521)
+
T Consensus 373 ~ 373 (382)
T PRK11128 373 F 373 (382)
T ss_pred H
Confidence 3
No 81
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.95 E-value=2e-25 Score=249.17 Aligned_cols=327 Identities=13% Similarity=-0.001 Sum_probs=232.1
Q ss_pred eeeecceeeCCccccchhhHHHHHHHHHHhhhhhhhccccCCCCchHHHHHHHHHHHHHHHHH---hccccHHHHHHHHH
Q 039541 104 IISDWSLECAGSSILSGLPSSCFFIGCLLGGLALSTLGDSSSLGRKKLLFLSCFAMSITALAT---IFANNIWIYSTIRF 180 (521)
Q Consensus 104 i~~~~~~~~~~~~~~~~~~~s~~~lg~~i~~~~~g~l~dr~~~Grr~~l~~~~~~~~~~~~~~---~~~~~~~~l~~~r~ 180 (521)
+..+++.+.+. ...+++.+++.++..++++++|+++|| +|||++++++.++.+++.++. ..+++++.+++.|+
T Consensus 36 ~~~~~~~~~~~--~~~~~~~~~~~l~~~l~~~~~G~l~Dr--~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~ 111 (1146)
T PRK08633 36 LIKAYDGSEQV--ILTAIVNALFLLPFLLLSSPAGFLADK--FSKNRVIRIVKLFEVGLTLLIVLAYYLGWFWLAFAVTF 111 (1146)
T ss_pred HHHHcCcccHH--HHHHHHHHHHHHHHHHHhhhHhhhccc--ccHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHH
Confidence 33445443322 456999999999999999999999999 999999999887766665554 34578999999999
Q ss_pred HhhccchhhHhhhhhheeeeecCcchhHHHHHHHHHHHHHHHHHHHHH-HhhcC---------CchhHHHHHHHHHHHHH
Q 039541 181 VAGFFRAPIMTSVIVLLSEMVSKRWRGQVVIIGFTFFSFGLVSLPAVA-YLSRG---------SSWKMLYVWTSIPSIVC 250 (521)
Q Consensus 181 l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~i~~~i~-~~~~~---------~~wr~~f~~~~~~~~~~ 250 (521)
++|++.+...+...+++.|++|+++|++++++...+..+|.++|++++ ++... .+|++.+.+.++...+.
T Consensus 112 l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~ig~~lg~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (1146)
T PRK08633 112 LLGAQSAIYSPAKYGIIPELVGKENLSRANGLLEAFTIVAILAGTALFSFLFESVNGNTPSEILGRIAPAGLVLLAVAVL 191 (1146)
T ss_pred HHHHHHHhhchHHHhhhHHhcCcccchhhhhHHHHHHHHHHHHHHHHHHHHHHhhccccccccccchHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999994 45443 24555554444444333
Q ss_pred HhhhceeeecchhHHHhcCCHHHHHHHHHHHhhhcCCCCCCCccccccCCCCCccccCCCcccccccHHHHhccHHHHHH
Q 039541 251 CIIIYPFISESPRWLFIHGHEAEAMAVLKRLASRSNYQSDYGLESCCLSNMPPKAKNVIPKLDLYSSLKDLFNRKWALRR 330 (521)
Q Consensus 251 ~~~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 330 (521)
.++..+.+||+|.....+.+. + ...........++.+++++.++..
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~-~---------------------------------~~~~~~~~~~~~~~l~~~~~~~~~ 237 (1146)
T PRK08633 192 GLIFAYRLPKVPAAAPEVFDK-K---------------------------------KYLFPKLLWRNLKLLRSDRVLWLA 237 (1146)
T ss_pred HHHHHhcCcCCCCCCcccccc-c---------------------------------ccccHHHHHHHHHHHhcCcHHHHH
Confidence 334555677765321100000 0 000000111256677888876665
Q ss_pred HHHHHHHHHHHHHHHHhHHhh-ccCCCccHH----HHHHHHHHHhHhHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHH
Q 039541 331 LLTIMALAFGIGVVYFGLLLG-VGNLSFNIY----LSLAFNGLLDIPAYLLTFILIERWSRKSSILTFCILSGTCSAICV 405 (521)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~----~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~i~~~~~~ 405 (521)
++...+.++.........+.+ ....+.+.. ......+++.+++.++.+++.||+++++.+.++.++.+++.+++.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~ 317 (1146)
T PRK08633 238 IIGLSYFWFISQLAQANFPAYAKEVLGLDNTFQVQYLLAASAIGIGIGSLLAGRLSGRHIELGLVPLGALGLALSLFLLP 317 (1146)
T ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCceEccchhHHHHHHHHHHHHHH
Confidence 555555444443333333433 333444333 333455677788999999999999998888888877777776666
Q ss_pred hcCCchHHHHHHHHHHHHHHHHHHHHHHHHhhccccCchhhhhhhHHHHHhhhhhhhHHHHHHHh
Q 039541 406 AIGDEQEVLQIGLELASFFSACVAFNVLLVFGTELFTTCVRNSTTSLVRQAVNLGAAFSPVLISA 470 (521)
Q Consensus 406 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~ 470 (521)
+.... +..++..++.+++.+...+...+++.+..|++.||+++|+.+++..+|.++++.+.+.
T Consensus 318 ~~~~~--~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~rg~~~~~~~~~~~lg~~~~~~~~~~ 380 (1146)
T PRK08633 318 TAPSL--ASVLVLFFLFGFSAGLFIVPLNALIQFRAPEKELGKVLAANNFLQNVGMLLFLALTTL 380 (1146)
T ss_pred HhhhH--HHHHHHHHHHHHHHHHhhHHHHHHHhhcCCccchhhhhHHHHHHHHHHHHHHHHHHHH
Confidence 54422 4556677778888888888889999999999999999999999999988777776654
No 82
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.94 E-value=9.7e-26 Score=218.67 Aligned_cols=311 Identities=16% Similarity=0.150 Sum_probs=223.7
Q ss_pred CcceeeecceeeCCccccchhhHHHHHHHHHHhhhhhhhccccCCC-----CchHHH-HHHHHHHHHHHHHHhcc---cc
Q 039541 101 DTTIISDWSLECAGSSILSGLPSSCFFIGCLLGGLALSTLGDSSSL-----GRKKLL-FLSCFAMSITALATIFA---NN 171 (521)
Q Consensus 101 ~~~i~~~~~~~~~~~~~~~~~~~s~~~lg~~i~~~~~g~l~dr~~~-----Grr~~l-~~~~~~~~~~~~~~~~~---~~ 171 (521)
.|.+.+|+|++.++. |+.... .+...+ .+++|+++|| + ||||.+ +.+.++.++..++.++. .+
T Consensus 11 ~~~~~~~~g~s~~~~----g~~~~~-~~~~~~-~~~~g~~~Dr--~~~~~~Grr~~~l~~~~~~~~~~~~~l~~~~~~~~ 82 (356)
T TIGR00901 11 LPYWLRSKNVSLKTI----GFFSLV-GLPYSL-KFLWSPLVDT--VYLPFFGRRRSWLVLTQVLLLSLLLILSFLVPSTD 82 (356)
T ss_pred HHHHHHHcCCCHHHH----HHHHHH-HHHHHH-HHHHHHHHhc--ccCCCCCccHHHHHHHHHHHHHHHHHHHcCCcchh
Confidence 788999999999776 888655 455555 8999999999 7 898874 66777887877777777 46
Q ss_pred HHHHHHHHHHhhccchhhHhhhhhheeeeecCcchhHHHHHHHHHHHHHHHHHHHH-HHhhcCCc--------hhHHHHH
Q 039541 172 IWIYSTIRFVAGFFRAPIMTSVIVLLSEMVSKRWRGQVVIIGFTFFSFGLVSLPAV-AYLSRGSS--------WKMLYVW 242 (521)
Q Consensus 172 ~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~i~~~i-~~~~~~~~--------wr~~f~~ 242 (521)
.+.+....++.+++.+...+...+++.|++|+++|+++.++...+..+|.++++.+ +.+....+ ||.+|++
T Consensus 83 l~~l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~~~~g~~~~~~~~wr~~f~i 162 (356)
T TIGR00901 83 LPLLAGLAFLIAFFSATQDIALDAWRLEILSDEELGYGSTIYIVGYRAGMLLSGSLALVLASPEFANTGLITLWGYIFFW 162 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhchHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccHHHHHH
Confidence 67778888888999998999999999999999999999999999999999999988 56666666 9999999
Q ss_pred HHHHHHHHHhhhceeeecchhHHHhcCCHHHHHHHHHHHhhhcCCCCCCCccccccCCCCCccccCCCcccccccHHHHh
Q 039541 243 TSIPSIVCCIIIYPFISESPRWLFIHGHEAEAMAVLKRLASRSNYQSDYGLESCCLSNMPPKAKNVIPKLDLYSSLKDLF 322 (521)
Q Consensus 243 ~~~~~~~~~~~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 322 (521)
.++..++..++.++..||+++. +.+.++.++ +. .+.+++++
T Consensus 163 ~ai~~l~~~~~~~~~~~e~~~~---~~~~~~~~~---~~---------------------------------~~~~~~~~ 203 (356)
T TIGR00901 163 TALLILPGLLVTLFLAKEPQED---ASVPKPLTQ---AV---------------------------------LKPIREFF 203 (356)
T ss_pred HHHHHHHHHHHHHHhccCCCcc---cccchhHHH---HH---------------------------------HHHHHHHH
Confidence 9988777664444445664321 000000000 00 12455666
Q ss_pred ccHH---HHHHHHHHHHHHHHHHHHHHhHHhhccCCCccHHHHHHHH---H-HHhHhHHHHHHHHHhhcCCchHHHHHHH
Q 039541 323 NRKW---ALRRLLTIMALAFGIGVVYFGLLLGVGNLSFNIYLSLAFN---G-LLDIPAYLLTFILIERWSRKSSILTFCI 395 (521)
Q Consensus 323 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~~g~l~dr~g~~~~~~~~~~ 395 (521)
+++. .+...+..++..+.....+...+.++.+.+.+......+. + +..+++.++++++.||+|+|+.+..+.+
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~ 283 (356)
T TIGR00901 204 QRKNMIQALLLLLLIVLYKLGDSAATVLTTLFLLDMGFSKEEIALVAKINGLLGAILGGLIGGIIMQPLNILYALLLFGI 283 (356)
T ss_pred HhcCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHH
Confidence 6654 3333333333444444444445555555666655443322 2 4567889999999999999998888888
Q ss_pred HHHHHHHHHHhcC-C--------chHHHHHHHHHHHHHHHHHHHHHHHHhhccccCchhhhhhhHHHHHhhh
Q 039541 396 LSGTCSAICVAIG-D--------EQEVLQIGLELASFFSACVAFNVLLVFGTELFTTCVRNSTTSLVRQAVN 458 (521)
Q Consensus 396 ~~~i~~~~~~~~~-~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ 458 (521)
+.++....+.+.. . ...+......++.+++.+...+...++..|.+|++.||+.+|+.+...+
T Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~ 355 (356)
T TIGR00901 284 VQALTNAGFVWLASNGHHDGITFPHLLMLFLTITLEAVTGGLGTVAFVAFLSKLSNPKFGATQMALLSSLSA 355 (356)
T ss_pred HHHHHHHHHHHHHhcCcccccccchHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHh
Confidence 7777666554431 1 1124455566677888899999999999999999999999999887654
No 83
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.94 E-value=7.2e-25 Score=243.69 Aligned_cols=316 Identities=12% Similarity=-0.010 Sum_probs=227.5
Q ss_pred ccchhhHHHHHHHHHHhhhhhhhccccCCCCchHHHHH---HHHHHHHHHHHHhccccHHHHHHHHHHhhccchhhHhhh
Q 039541 117 ILSGLPSSCFFIGCLLGGLALSTLGDSSSLGRKKLLFL---SCFAMSITALATIFANNIWIYSTIRFVAGFFRAPIMTSV 193 (521)
Q Consensus 117 ~~~~~~~s~~~lg~~i~~~~~g~l~dr~~~Grr~~l~~---~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~ 193 (521)
.+.++..+++.++++++++++|+++|| +|||+++.. ..++.++..+.....+++++++++|+++|++.+...|+.
T Consensus 52 ~~~~l~~~~~~l~~~l~~~~~G~laDr--~~rk~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~l~gi~~a~~~p~~ 129 (1140)
T PRK06814 52 ALVTLAGAVFILPFFIFSALAGQLADK--YDKAKLAKILKFAEIGIAALAIYGFHLNSVPLLFAALFLMGIHSALFGPIK 129 (1140)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHhhhhh--ccHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhchHH
Confidence 345888999999999999999999999 999997633 323333333334445899999999999999999999999
Q ss_pred hhheeeeecCcchhHHHHHHHHHHHHHHHHHHHH-HHhhcCCchhHHHHHHHHHHHHHHhhhceeeecchhHHHhcCCHH
Q 039541 194 IVLLSEMVSKRWRGQVVIIGFTFFSFGLVSLPAV-AYLSRGSSWKMLYVWTSIPSIVCCIIIYPFISESPRWLFIHGHEA 272 (521)
Q Consensus 194 ~~~i~~~~~~~~rg~~~~~~~~~~~~G~~i~~~i-~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~~~esp~~~~~~~~~~ 272 (521)
.+++.|++|+++|++++++.+++.++|.++||++ +++....+|++.|+..++..++.+ ++.+++|+++... ++...
T Consensus 130 ~a~l~~~~~~~~~~~a~~~~~~~~~ig~~igp~l~g~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~--~~~~~ 206 (1140)
T PRK06814 130 YSILPDHLNKDELLGANALVEAGTFIAILLGTIIGGLATISGNFVILVALLMGIAVLGW-LASLFIPKTGNAA--PDLKI 206 (1140)
T ss_pred HHhhHhhcCccccchhhHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHH-HHHhhCCCCCCCC--CCCee
Confidence 9999999999999999999999999999999999 677788899999955555555544 5556666653200 00000
Q ss_pred HHHHHHHHHhhhcCCCCCCCccccccCCCCCccccCCCcccccccHHHHhccHHHHHHHHHHHHHHHHHHHHHHhHHhhc
Q 039541 273 EAMAVLKRLASRSNYQSDYGLESCCLSNMPPKAKNVIPKLDLYSSLKDLFNRKWALRRLLTIMALAFGIGVVYFGLLLGV 352 (521)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (521)
+ ....+ +....++.+.+++.++...+...+.++.........|.++
T Consensus 207 ~-~~~~~---------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 252 (1140)
T PRK06814 207 D-RNIIR---------------------------------STITLLKYAKADKRIWLAILGISWFWLVGAVVLSQLPLLA 252 (1140)
T ss_pred c-cchHH---------------------------------HHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhHHHH
Confidence 0 00000 0012567788888877766666666555444433445544
Q ss_pred cC-CCccHH---HHHHHHHHHhHhHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHhc------------------CCc
Q 039541 353 GN-LSFNIY---LSLAFNGLLDIPAYLLTFILIERWSRKSSILTFCILSGTCSAICVAI------------------GDE 410 (521)
Q Consensus 353 ~~-~~~~~~---~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~i~~~~~~~~------------------~~~ 410 (521)
.+ ++.+.. ......+++.++|.++.+++.++..+++.+..+.++.+++.+.+.+. ...
T Consensus 253 ~~~~g~~~~~~g~~~~~~~~g~~ig~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 332 (1140)
T PRK06814 253 KETLGGDENVATLFLAVFSVGVAVGSFLASKLSEGRITLLYVPIGALLMGLFGLDLAFASSSVPAEPAQLKSILVFLSKR 332 (1140)
T ss_pred HHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCceeeeeehHHHHHHHHHHHHHHhcccccccccccccchhhhhccc
Confidence 43 454433 33455667888999999999988877766665555555544433332 001
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhccccCchhhhhhhHHHHHhhhhhhhHHHHHHHhh
Q 039541 411 QEVLQIGLELASFFSACVAFNVLLVFGTELFTTCVRNSTTSLVRQAVNLGAAFSPVLISAG 471 (521)
Q Consensus 411 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~~ 471 (521)
+.+...+..++.+++.+...+...+++.+.+|++.||+++|+.++...+|..+++++.+..
T Consensus 333 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~G~v~g~~~~~~~~~~~ig~~~~g~l 393 (1140)
T PRK06814 333 HGWRILIDLFGLAAAGGLYIVPLFAALQAWANPAHRARVIAANNVLNAAFMVAGTIILALL 393 (1140)
T ss_pred ccHHHHHHHHHHHHHHHHhHHHHHHHHHhhCCcccceeeeHHHHHHHHHHHHHHHHHHHHH
Confidence 2255566777788888888888999999999999999999999999999999999988753
No 84
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.94 E-value=2.4e-25 Score=220.63 Aligned_cols=349 Identities=14% Similarity=0.022 Sum_probs=218.3
Q ss_pred CcceeeecceeeCCccccchhhHHHHHHHHHHhhhhhhhccccCCCCchHHHHHHHHHHHHHHHHHh---ccc-----cH
Q 039541 101 DTTIISDWSLECAGSSILSGLPSSCFFIGCLLGGLALSTLGDSSSLGRKKLLFLSCFAMSITALATI---FAN-----NI 172 (521)
Q Consensus 101 ~~~i~~~~~~~~~~~~~~~~~~~s~~~lg~~i~~~~~g~l~dr~~~Grr~~l~~~~~~~~~~~~~~~---~~~-----~~ 172 (521)
...+.+++|++..+. |++.+++.++..++++++|+++|| +|||++++++..+.+++..... .++ .+
T Consensus 34 ~~~l~~~~g~s~~~~----g~~~s~~~l~~~i~~~~~G~l~Dr--~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 107 (420)
T PRK09528 34 PIWLHDINGLSGTDT----GIIFSANSLFALLFQPLYGLISDK--LGLKKHLLWIISGLLVLFGPFFIYVFAPLLQYNIL 107 (420)
T ss_pred HHHHHHhcCCCHHHH----HHHHHHHHHHHHHHHHHHHHHHHH--hCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345567799999666 999999999999999999999999 9999999887666554433221 111 11
Q ss_pred HHHHHHHHHhhccchhhHhhhhhheeeeecCcchhHHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHh
Q 039541 173 WIYSTIRFVAGFFRAPIMTSVIVLLSEMVSKRWRGQVVIIGFTFFSFGLVSLPAVAYLSRGSSWKMLYVWTSIPSIVCCI 252 (521)
Q Consensus 173 ~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~i~~~i~~~~~~~~wr~~f~~~~~~~~~~~~ 252 (521)
...++++++.|.+.....+....+..+ . .+++++.++......++|..++|.++..+...+|+++|++.+++.++..+
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~f~~~~~~~~~~~~ 185 (420)
T PRK09528 108 LGAIVGGIYLGFGFLAGAGAIEAYIER-V-SRRSGFEYGRARMWGSLGWALCAFIAGILFNINPQINFWLGSGSALILLV 185 (420)
T ss_pred HHHHHHHHHhhhhhccchhhhhhHHHH-H-HhhccccchhhHHhhhHHHHHHHHHHHHHHhcCchHhHHHHHHHHHHHHH
Confidence 122333444444333333333333221 1 24567788888889999999999985444446999999998888777764
Q ss_pred hhceeeecchhHHHhcCCHHHHHHHHHHHhhhcCCCCCCCccccccCCCCCccccCCCcccccccHHHHhccHHHHHHHH
Q 039541 253 IIYPFISESPRWLFIHGHEAEAMAVLKRLASRSNYQSDYGLESCCLSNMPPKAKNVIPKLDLYSSLKDLFNRKWALRRLL 332 (521)
Q Consensus 253 ~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 332 (521)
+.++..+|.++....+ ++. + . +++.......++.+|+|.++...+
T Consensus 186 ~~~~~~~~~~~~~~~~---~~~--------~-~-----------------------~~~~~~~~~~~~~l~~~~~~~l~l 230 (420)
T PRK09528 186 LLFFAKPDAPSTAKVA---NAL--------G-A-----------------------NASAVSLKDALALLKLPKFWFLVL 230 (420)
T ss_pred HHhcccccccchhhhc---cch--------h-c-----------------------ccccccHHHHHHHccCCCeEeehH
Confidence 4444444432210000 000 0 0 000001124556778877654443
Q ss_pred HHHHHHHHHHHHHHhHHhh----ccCCCccH---HHHHHHHHHHhHhHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHH
Q 039541 333 TIMALAFGIGVVYFGLLLG----VGNLSFNI---YLSLAFNGLLDIPAYLLTFILIERWSRKSSILTFCILSGTCSAICV 405 (521)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~----~~~~~~~~---~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~i~~~~~~ 405 (521)
................+.+ ..+.+.+. .....+..+...++.++.|++.||+|+|+.+..+..+.++..+++.
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~l~~~~~~l~~ 310 (420)
T PRK09528 231 YVIGVACFYDVFDQQFPNFFASFFATPEQGTRVFGYLNSFQVFLEALIMFFAPFIINRIGAKNALLLAGTIMAVRIIGSG 310 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHH
Confidence 3323222221111112222 11222222 2333444566778899999999999999999888888888777766
Q ss_pred hcCCchHHHHHHHHHHHHHHHHHHHHHHHHhhccccCchhhhhhhHH-HHHhhhhhhhHHHHHHHhh--ccchhHHHHHH
Q 039541 406 AIGDEQEVLQIGLELASFFSACVAFNVLLVFGTELFTTCVRNSTTSL-VRQAVNLGAAFSPVLISAG--RQNEFLSFGVF 482 (521)
Q Consensus 406 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~-~~~~~~~g~~~~p~~~~~~--~~~~~~~~~~~ 482 (521)
+..+. +..+...++.+++.+...+....+..|.+|++.+++..+. .++...+|.+++|.+.|+. ..++...|.+.
T Consensus 311 ~~~~~--~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~lg~~ig~~~~G~l~~~~G~~~~f~~~ 388 (420)
T PRK09528 311 FATGP--LEVSILKLLHAFEVPFLLVGVFKYITLNFDVRLSATIYLVGFQFAKQLGAVFLSTLAGNLYDSIGFQGTYLIL 388 (420)
T ss_pred hcccH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccceeeeeeehHHHHHHHHHHHHHHHHHHHHHhhCchHHHHHH
Confidence 54433 4455556666666666667777888999999999888765 5667789999999999873 34677778877
Q ss_pred HHHHHHHhHhhh
Q 039541 483 GLVVFCFGFFVV 494 (521)
Q Consensus 483 ~~~~~~~~~~~~ 494 (521)
+++.++..++.+
T Consensus 389 ~~~~~i~~~~~~ 400 (420)
T PRK09528 389 GGIVLLFTLISV 400 (420)
T ss_pred HHHHHHHHHHHH
Confidence 777666555443
No 85
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.94 E-value=9.6e-25 Score=217.86 Aligned_cols=381 Identities=10% Similarity=-0.033 Sum_probs=240.8
Q ss_pred CcceeeecceeeCCccccchhhHHHHHHHHHHhhhhhhhccccCCCCchHHHHHHHHHHHHHHHHHhccccHHH-HHHHH
Q 039541 101 DTTIISDWSLECAGSSILSGLPSSCFFIGCLLGGLALSTLGDSSSLGRKKLLFLSCFAMSITALATIFANNIWI-YSTIR 179 (521)
Q Consensus 101 ~~~i~~~~~~~~~~~~~~~~~~~s~~~lg~~i~~~~~g~l~dr~~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~-l~~~r 179 (521)
...+.+++|++.++. +++.+.+.....+..+++|+++|| ++||||+++++.+++++++++++++.+... ++++|
T Consensus 38 ~~yl~~~lg~~~~~a----~~i~~~~~~~~~~~~~~~G~laDr-~~G~r~~~~~g~~~~~~g~~~~~~~~~~~~ll~~~~ 112 (489)
T PRK10207 38 AVFFVKQLGFSQEQA----FITFGAFAALVYGLISIGGYVGDH-LLGTKRTIVLGAIVLAIGYFMTGMSLLKPDLIFIAL 112 (489)
T ss_pred HHHHHHHcCCCHHHH----HHHHHHHHHHHHHHHhhHHHhhhh-ccchHHHHHHHHHHHHHHHHHHHHhccchhHHHHHH
Confidence 345677899998776 999999998888889999999996 369999999999999999999999877554 55899
Q ss_pred HHhhccchhhHhhhhhheeeeecCc--chhHHHHHHHHHHHHHHHHHHHH-HHhhcCCchhHHHHHHHHHHHHHHhhhce
Q 039541 180 FVAGFFRAPIMTSVIVLLSEMVSKR--WRGQVVIIGFTFFSFGLVSLPAV-AYLSRGSSWKMLYVWTSIPSIVCCIIIYP 256 (521)
Q Consensus 180 ~l~G~~~g~~~~~~~~~i~~~~~~~--~rg~~~~~~~~~~~~G~~i~~~i-~~~~~~~~wr~~f~~~~~~~~~~~~~~~~ 256 (521)
+++|+|.|...+...+++.|.+|++ +|+++++++..+.++|.++||.+ +++.++.|||+.|++.++..++.. +.+.
T Consensus 113 ~l~~ig~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l~g~l~~~~gw~~~F~i~~i~~~~~~-~~~~ 191 (489)
T PRK10207 113 GTIAVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSLAPVIADKFGYSVTYNLCGAGLIIAL-LVYF 191 (489)
T ss_pred HHHHhccccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHHHHHHHHHhhChHHHHHHHHHHHHHHH-HHHH
Confidence 9999999999999999999999877 45889999999999999999988 778888899999998755333333 3333
Q ss_pred eeecchhHHH--hcCCHHHHHHHHH----------HHhhhcCCCCCCCccc-cccCCCCC--ccccCCCcccccccHHHH
Q 039541 257 FISESPRWLF--IHGHEAEAMAVLK----------RLASRSNYQSDYGLES-CCLSNMPP--KAKNVIPKLDLYSSLKDL 321 (521)
Q Consensus 257 ~~~esp~~~~--~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~-~~~~~~~~--~~~~~~~~~~~~~~~~~l 321 (521)
..++..+... .+++..+...... .... ........... ........ --.++.+ ..++
T Consensus 192 ~~~~~~~~~~~~~~~~~~d~~~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~~~~f~~~~~~-------~~~~ 263 (489)
T PRK10207 192 ACRGMVKDIGSEPDHKPMSFSKLLLVLLGSVVMIFVCAW-LMHNVEVANLVLIVLSIVVTIIFFREAFK-------LDKT 263 (489)
T ss_pred HcchhhcccCCCCCccchhhhhHHHHHHHHHHHHHHHHH-HHhhhhHHHHHHHHHHHHHHHHHHHHHhc-------CCHH
Confidence 3332211000 0000001000000 0000 00000000000 00000000 0000000 0134
Q ss_pred hccHHHHHHHHH--HHHHHHHHHHHHHhHHhhccC-C-----Cc--cHHHHHHHHHHHhHhHHHHHHHHHhhcCCchH--
Q 039541 322 FNRKWALRRLLT--IMALAFGIGVVYFGLLLGVGN-L-----SF--NIYLSLAFNGLLDIPAYLLTFILIERWSRKSS-- 389 (521)
Q Consensus 322 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~-~-----~~--~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~-- 389 (521)
+|+|.+....+. ....+.......+.++.+.++ . |. .+.....+..+..++.+++.+++.||+++|+.
T Consensus 264 ~r~r~~~~~~l~~~~~~f~~~~~q~~~~l~l~~~~~~~~~~~G~~i~~~~~~~~n~~~iii~~pl~~~l~~rl~~r~~~~ 343 (489)
T PRK10207 264 GRNKMFVAFVLMLEAVVFYILYAQMPTSLNFFAINNVHHEILGFSINPVSFQALNPFWVVVASPILAGIYTHLGSKGKDL 343 (489)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHhccccccceEECHHHHHhHhHHHHHHHHHHHHHHHHHHhhCCCCC
Confidence 454443322211 222333333333334444432 1 21 22333344445566777788999999998863
Q ss_pred -----HHHHHHHHHHHHHHHH-----hcC---CchHHHHHHHHHHHHHHHHHHHHHHHHhhccccCchhhhhhhHHHHHh
Q 039541 390 -----ILTFCILSGTCSAICV-----AIG---DEQEVLQIGLELASFFSACVAFNVLLVFGTELFTTCVRNSTTSLVRQA 456 (521)
Q Consensus 390 -----~~~~~~~~~i~~~~~~-----~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 456 (521)
+.+++++.+++++.+. ... ..+.++.....++.+++.....+....++.+..|++.++.++|+.+..
T Consensus 344 ~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~l~g~Ge~~~~~~g~~~~~~~aP~~~~g~~~g~~~l~ 423 (489)
T PRK10207 344 SMPMKFTLGMFLCSLGFLTAAAAGMWFADAQGLTSPWFIVLVYLFQSLGELFISALGLAMIAALVPQHLMGFILGMWFLT 423 (489)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhChHHHHHHHHHHHHHH
Confidence 6677777776664331 111 122366777888999999999999999999999999999999999999
Q ss_pred hhhhhhHHHHHHHhhc------------cchhHHHHHHHHHHHHHhHhhhc
Q 039541 457 VNLGAAFSPVLISAGR------------QNEFLSFGVFGLVVFCFGFFVVF 495 (521)
Q Consensus 457 ~~~g~~~~p~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~ 495 (521)
..+|+.++..+..... ..+...|...++.+++..++.+.
T Consensus 424 ~~ig~~lg~~l~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~v~~~~ 474 (489)
T PRK10207 424 QAAAFLLGGYVATFTAVPDNITDPLETLPVYTNVFGKIGLVTLGVAVVMAL 474 (489)
T ss_pred HHHHHHHHHHHHHHhccccccccchhhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 9999998887775321 12355666666666655554433
No 86
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.94 E-value=6.4e-24 Score=211.10 Aligned_cols=347 Identities=15% Similarity=0.074 Sum_probs=253.0
Q ss_pred CcceeeecceeeCCccccchhhHHHHHHHHHHhhhhhhhccccCCCCchHHHHHHHHHHHHHHHHHhcc-----ccHHHH
Q 039541 101 DTTIISDWSLECAGSSILSGLPSSCFFIGCLLGGLALSTLGDSSSLGRKKLLFLSCFAMSITALATIFA-----NNIWIY 175 (521)
Q Consensus 101 ~~~i~~~~~~~~~~~~~~~~~~~s~~~lg~~i~~~~~g~l~dr~~~Grr~~l~~~~~~~~~~~~~~~~~-----~~~~~l 175 (521)
.+-+..+..-|+ ..++++.++..+...+.++++|.++|| ++||++++.+.++.++..++.++. .+.+.+
T Consensus 33 ~~wlv~~lt~S~----~~valv~~a~~LP~~Llsl~aG~laDr--~drrrili~~~~~~~~~~~~L~~l~~~~~~~~~~L 106 (524)
T PF05977_consen 33 LAWLVTQLTGSP----LMVALVQAASTLPILLLSLFAGALADR--FDRRRILILSQLLRALVALLLAVLAFFGLLSPWLL 106 (524)
T ss_pred HHHHHHHHhCCH----HHHHHHHHHHHHHHHHHHHHHHHHhhc--ccchHHHHHHHHHHHHHHHHHHHHHHhCcCCHHHH
Confidence 344444444444 556999999999999999999999999 999999999888877665554432 478999
Q ss_pred HHHHHHhhccchhhHhhhhhheeeeecCcchhHHHHHHHHHHHHHHHHHHHH-HHhhcCCchhHHHHHHHHHHHHHHhhh
Q 039541 176 STIRFVAGFFRAPIMTSVIVLLSEMVSKRWRGQVVIIGFTFFSFGLVSLPAV-AYLSRGSSWKMLYVWTSIPSIVCCIII 254 (521)
Q Consensus 176 ~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~i~~~i-~~~~~~~~wr~~f~~~~~~~~~~~~~~ 254 (521)
++.-++.|++.+...|+..+++.|..|+++...+.++.+...++..++||.+ |.++...|-.+.|++.++..++.. +.
T Consensus 107 l~~~fl~g~~~a~~~PA~~A~ip~lV~~~~L~~A~al~s~~~niar~iGPalgG~Lva~~G~~~~f~inalsfl~~i-~~ 185 (524)
T PF05977_consen 107 LILTFLLGIGSAFFNPAWQAIIPELVPKEDLPAANALNSISFNIARIIGPALGGILVAFFGAAAAFLINALSFLISI-LA 185 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccHhhHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHH-HH
Confidence 9999999999999999999999999999999999999999999999999999 566666788889998887666554 33
Q ss_pred ceeeecchhHHHhcCCHHHHHHHHHHHhhhcCCCCCCCccccccCCCCCccccCCCcccccccHHHHhccHHHHHHHHHH
Q 039541 255 YPFISESPRWLFIHGHEAEAMAVLKRLASRSNYQSDYGLESCCLSNMPPKAKNVIPKLDLYSSLKDLFNRKWALRRLLTI 334 (521)
Q Consensus 255 ~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 334 (521)
...++..++ +++ ...++..+.+ ++.++-+.++|.++..++..
T Consensus 186 l~~~~~~~~----~~~-~~~e~~~~~l---------------------------------~~G~ryv~~~~~l~~~l~~~ 227 (524)
T PF05977_consen 186 LLRWKPPPP----PSS-LPRERFFSAL---------------------------------REGLRYVRSSPPLRSVLLRS 227 (524)
T ss_pred HHHcccccc----ccc-cchhhhhhhH---------------------------------HHHHHHHhcchHHHHHHHHH
Confidence 333332211 000 0001111111 12556666777766555444
Q ss_pred HHHHHHHHHHHHhHHhhccC-CCccHHH---HHHHHHHHhHhHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHhcCCc
Q 039541 335 MALAFGIGVVYFGLLLGVGN-LSFNIYL---SLAFNGLLDIPAYLLTFILIERWSRKSSILTFCILSGTCSAICVAIGDE 410 (521)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~---~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~i~~~~~~~~~~~ 410 (521)
.++.+......-.+|.+.++ ++.+... .....+++.++|+++.+++.+|+++++++..+.++.+++++.+.+.++.
T Consensus 228 ~~~~l~~~a~~aLlPl~a~~~l~~~a~~yGll~a~~gvGai~Gal~~~~l~~~~~~~~lv~~~~~~~a~~~~~lal~~~~ 307 (524)
T PF05977_consen 228 FLFNLFASAVWALLPLFARDVLGGGASGYGLLLAAFGVGAILGALLLPRLRRRLSSRRLVLLASLLFALALLLLALSPSF 307 (524)
T ss_pred HHHHHhhhHHHHhhhHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchhhHHHHHHHHHHHHHHhcchHH
Confidence 44444333333445665543 4444433 3355678888999999999999999998888888888887777765544
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhccccCchhhhhhhHHHHHhhhhhhhHHHHHHHhh--ccchhHHHHHHHHHHHH
Q 039541 411 QEVLQIGLELASFFSACVAFNVLLVFGTELFTTCVRNSTTSLVRQAVNLGAAFSPVLISAG--RQNEFLSFGVFGLVVFC 488 (521)
Q Consensus 411 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~~--~~~~~~~~~~~~~~~~~ 488 (521)
+...+.+++.|++.........+...+..|++.||+++++..+....+..+|.++.|.. ..+....+.+.++..++
T Consensus 308 --~~~~~~l~l~G~~~~~~~~~~~t~~Q~~~P~~~~GRv~si~~~~~~g~~~lGsll~G~la~~~g~~~al~~a~~~lll 385 (524)
T PF05977_consen 308 --WLALIALFLAGAAWIIANSSLNTLVQLSVPDWVRGRVFSIYQMVFFGGMPLGSLLWGFLADHFGVRTALLIAGAALLL 385 (524)
T ss_pred --HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHH
Confidence 66677788888888888888899999999999999999999998888888888888863 33455566666655555
Q ss_pred HhHhhh
Q 039541 489 FGFFVV 494 (521)
Q Consensus 489 ~~~~~~ 494 (521)
+.++..
T Consensus 386 ~~~~~~ 391 (524)
T PF05977_consen 386 SALIAL 391 (524)
T ss_pred HHHHHH
Confidence 554443
No 87
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.93 E-value=4.2e-24 Score=210.17 Aligned_cols=345 Identities=13% Similarity=0.057 Sum_probs=229.1
Q ss_pred ceeeecceeeCCccccchhhHHHHHHHHHHhhhhhhhccccCCCCchHHHHHHHHHHHHHHHHH---hcc-----ccHHH
Q 039541 103 TIISDWSLECAGSSILSGLPSSCFFIGCLLGGLALSTLGDSSSLGRKKLLFLSCFAMSITALAT---IFA-----NNIWI 174 (521)
Q Consensus 103 ~i~~~~~~~~~~~~~~~~~~~s~~~lg~~i~~~~~g~l~dr~~~Grr~~l~~~~~~~~~~~~~~---~~~-----~~~~~ 174 (521)
.+.+++|.+..+. |++.+.+.++..+++++.|+++|| +|||+.++.++...+++.... .+. +.+..
T Consensus 28 ~~~~~~g~s~~~~----g~~~~~~~l~~~i~~~~~G~l~Dr--~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (396)
T TIGR00882 28 WLHDVNGLSKTDT----GIVFSCISLFSILFQPLFGLISDK--LGLKKHLLWIISGLLVLFAPFFIYVFGPLLQSNILVG 101 (396)
T ss_pred HHHHhcCCCHHHH----HHHHHHHHHHHHHHHHHHHHHHHH--hCcHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHH
Confidence 3456789998666 999999999999999999999999 999999988776665544332 222 22345
Q ss_pred HHHHHHHhhccchhhHhhhhhheeeeecCcchhHHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHhhh
Q 039541 175 YSTIRFVAGFFRAPIMTSVIVLLSEMVSKRWRGQVVIIGFTFFSFGLVSLPAVAYLSRGSSWKMLYVWTSIPSIVCCIII 254 (521)
Q Consensus 175 l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~i~~~i~~~~~~~~wr~~f~~~~~~~~~~~~~~ 254 (521)
+++.|++.|++.+...+....++.|.. +++++..+......++|.+++|.++..+...+||++|++.+++.++..++.
T Consensus 102 ~~~~~~~~g~~~~~~~~~~~~~~~~~~--~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~f~~~~~~~~~~~~~~ 179 (396)
T TIGR00882 102 AIVGGLYLGFVFSAGAGAIEAYIEKVS--RNSNFEYGKARMFGCVGWALCASIAGILFSIDPQIVFWLGSGFALILMLLL 179 (396)
T ss_pred HHHHHHHHHHHhccchhhHHHHHHHhh--hhcccccchhhhhcccHHHHHHHHHhhhhccCchHHHHHHHHHHHHHHHHH
Confidence 567789999988888888877776653 334566777778889999999999666556799999999988888776444
Q ss_pred ceeeecchhHHHhcCCHHHHHHHHHHHhhhcCCCCCCCccccccCCCCCccccCCCcccccccHHHHhccHHHHHHHHHH
Q 039541 255 YPFISESPRWLFIHGHEAEAMAVLKRLASRSNYQSDYGLESCCLSNMPPKAKNVIPKLDLYSSLKDLFNRKWALRRLLTI 334 (521)
Q Consensus 255 ~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 334 (521)
+...||+|+. ++.+ ...+ . ++ +.....+.++++|+|.++...+..
T Consensus 180 ~~~~~~~~~~-------~~~~---------~~~~---------------~-~~---~~~~~~~~~~~l~~~~~~~~~l~~ 224 (396)
T TIGR00882 180 MFAKPKAPSS-------ATVA---------NALG---------------A-NA---SAFSLKLALELFRQRKFWMFVLYV 224 (396)
T ss_pred HHhCCCCchh-------hhhh---------cccc---------------c-cc---CCCCHHHHHHHHcCCcHHHHHHHH
Confidence 4444444321 0000 0000 0 00 001112567888998766554444
Q ss_pred HHHHHHHHHHHHhHHhhcc----CCCccH---HHHHHHHHHHhHhHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHhc
Q 039541 335 MALAFGIGVVYFGLLLGVG----NLSFNI---YLSLAFNGLLDIPAYLLTFILIERWSRKSSILTFCILSGTCSAICVAI 407 (521)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~----~~~~~~---~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~i~~~~~~~~ 407 (521)
+.............+.+.+ +.+.+. .....+..+...++.+..+++.||+|+|+.+.++..+.++........
T Consensus 225 ~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~g~~~~l~~~~~l~~l~~~~~~~~ 304 (396)
T TIGR00882 225 VGVACVYDVFDQQFANFFTSFFATPQQGTRVFGYVTTMGELLNALIMFCAPLIINRIGAKNALLIAGTIMSVRIIGSSFA 304 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHhc
Confidence 3333322222111222222 122222 223344456677788899999999999999988888877776665543
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHhhccccCchhhhhhhHH-HHHhhhhhhhHHHHHHHhh--ccchhHHHHHHHH
Q 039541 408 GDEQEVLQIGLELASFFSACVAFNVLLVFGTELFTTCVRNSTTSL-VRQAVNLGAAFSPVLISAG--RQNEFLSFGVFGL 484 (521)
Q Consensus 408 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~-~~~~~~~g~~~~p~~~~~~--~~~~~~~~~~~~~ 484 (521)
.+. +..++..++.+++..........+..+..|++.++++.+. .+....+|++++|.+.|+. ..++...|.+.++
T Consensus 305 ~~~--~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~at~~~~~~~~~~~lg~~~~~~l~G~l~~~~G~~~~f~~~~~ 382 (396)
T TIGR00882 305 TTA--LEVVILKMLHAFEVPFLLVGCFKYITSQFDVRLSATIYLIGFQFAKQLAMIFLSTLAGNMYDSIGFQGAYLVLGC 382 (396)
T ss_pred CCh--HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcceEEEeehHHHHHHHHHHHHHHHHhHHHHHHhcccHHHHHHHHH
Confidence 332 4455556666666555555666677788888888887766 5678899999999999873 3467788888777
Q ss_pred HHHHHhHh
Q 039541 485 VVFCFGFF 492 (521)
Q Consensus 485 ~~~~~~~~ 492 (521)
+.++..+.
T Consensus 383 ~~~i~~~~ 390 (396)
T TIGR00882 383 IVLLFTLI 390 (396)
T ss_pred HHHHHHHH
Confidence 77665544
No 88
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.93 E-value=3.1e-26 Score=207.69 Aligned_cols=331 Identities=16% Similarity=0.078 Sum_probs=232.7
Q ss_pred ccchhhHHHHHHHHHHhhhhhhhccccCCCCchHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHhhccchhhHhhhhhh
Q 039541 117 ILSGLPSSCFFIGCLLGGLALSTLGDSSSLGRKKLLFLSCFAMSITALATIFANNIWIYSTIRFVAGFFRAPIMTSVIVL 196 (521)
Q Consensus 117 ~~~~~~~s~~~lg~~i~~~~~g~l~dr~~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~ 196 (521)
.++|++.+.+.+.+.+.+++.|.+.|| +|+|-.+++|+.++.+++++.++.+++++++++|.+||+|.+....+..++
T Consensus 106 ~~iG~LFaskA~~qllvnp~~G~l~~~--iGy~ipm~~Gl~vmf~sTilFafg~sy~~l~vAR~LQgvgsA~~~tsglam 183 (464)
T KOG3764|consen 106 TQIGLLFASKALVQLLVNPFFGNLIDR--IGYKIPMVAGLFVMFLSTILFAFGNSYPMLFVARSLQGVGSAFADTSGLAM 183 (464)
T ss_pred cchhHHHHHHHHHHHHhcccchhhHHH--hccccHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHhhhhHHHHHhhhHHH
Confidence 556999999999999999999999999 999999999999999999999999999999999999999999999999999
Q ss_pred eeeeecCcc-hhHHHHHHHHHHHHHHHHHHHH-HHhhcCCchhHHHHHHHHHHHHHHhhhceeeecchhHHHhcCCHHHH
Q 039541 197 LSEMVSKRW-RGQVVIIGFTFFSFGLVSLPAV-AYLSRGSSWKMLYVWTSIPSIVCCIIIYPFISESPRWLFIHGHEAEA 274 (521)
Q Consensus 197 i~~~~~~~~-rg~~~~~~~~~~~~G~~i~~~i-~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~~~esp~~~~~~~~~~~~ 274 (521)
++|.+|+++ |++++|+...+.++|.++||.+ |.+-+..|.+.+|++.+++.++...+.++.++.+..
T Consensus 184 lAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~~Gk~aPFlVL~~v~Lld~~L~l~vi~p~~~----------- 252 (464)
T KOG3764|consen 184 LADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEFAGKSAPFLVLAIVLLLDGALQLLVIEPTEM----------- 252 (464)
T ss_pred HHHHcccchhhhHHHHHHHHHHhccceecCCcccchHhhcCCcCcHHHHHHHHHHHHHHHHheeCcccc-----------
Confidence 999998765 7999999999999999999999 566677899999999999999998555555544311
Q ss_pred HHHHHHHhhhcCCCCCCCccccccCCCCCccccCCCcccccccHHHHhccHHHHHHHHHHHHHHHHHHHHHHhHHhhcc-
Q 039541 275 MAVLKRLASRSNYQSDYGLESCCLSNMPPKAKNVIPKLDLYSSLKDLFNRKWALRRLLTIMALAFGIGVVYFGLLLGVG- 353 (521)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 353 (521)
+++ ...+..++++++++|..+...........+..+.--.++.+..
T Consensus 253 ----------~~~-----------------------~~~~~~~~~~Ll~dP~I~~~agai~~~n~~lafLePtlslwm~e 299 (464)
T KOG3764|consen 253 ----------DPD-----------------------STEQGTPMWSLLMDPYILLIAGAITFSNSSLAFLEPTLSLWMLE 299 (464)
T ss_pred ----------Ccc-----------------------ccccCccHHHHHhCchHhhhhcchhhccchHHHhCcccHHHHHH
Confidence 000 0000137889999997554433333333333333323334332
Q ss_pred CCC---ccHHHHHHHHHHHhHhHHHHHHHHHhhcC--CchHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHH
Q 039541 354 NLS---FNIYLSLAFNGLLDIPAYLLTFILIERWS--RKSSILTFCILSGTCSAICVAIGDEQEVLQIGLELASFFSACV 428 (521)
Q Consensus 354 ~~~---~~~~~~~~~~~~~~~~~~~~~g~l~dr~g--~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 428 (521)
+.. ...........+.-.++..+.|.+.||++ |......+.+..++++....+..... .+++-.+..+++.+.
T Consensus 300 ~m~~p~w~~G~~fLp~~~~y~ig~~lfg~la~k~~~~~wl~~~~gl~~~G~~~~~iP~~~~~~--~L~vp~~~l~~~i~~ 377 (464)
T KOG3764|consen 300 TMFTPGWEVGLAFLPASLSYAIGTNLFGKLADKYPHLRWLLSLGGLATVGVSSGPIPFATSIA--QLWVPNFGLGFGIGL 377 (464)
T ss_pred hccCCCcceeeeecccccchhccCchHHHHHHhcCchhHHHHHHHHHHHHHHhchhHhhhhHH--HHhhhhHHHHHHHHH
Confidence 222 22333344456677889999999999999 54444445555554444444443332 233333333444443
Q ss_pred HHHHH---HHhhccccCch---hhhhhhHHHHHhhhhhhhHHHHHHHhh--ccchhHHHHHHHHHHHHHhHhhhc
Q 039541 429 AFNVL---LVFGTELFTTC---VRNSTTSLVRQAVNLGAAFSPVLISAG--RQNEFLSFGVFGLVVFCFGFFVVF 495 (521)
Q Consensus 429 ~~~~~---~~~~~~~~~~~---~r~~~~~~~~~~~~~g~~~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 495 (521)
..+.. ..+..|.-..+ .-|...++......+|.++||.+.|.. ..++.+...+.++..++-.-+..+
T Consensus 378 ~dasl~P~l~~lvd~rh~s~~~vYGsVyaIad~a~sla~a~GP~~gg~iv~~iGF~wl~~iig~~n~iyapvl~l 452 (464)
T KOG3764|consen 378 ADASLIPTLGYLVDPRHVSGFNVYGSVYAIADAAFSLAYAIGPTFGGSLVEAIGFEWLMTIIGILNLIYAPVLLL 452 (464)
T ss_pred HHHHHhhhhHHhcchhhccccceeeeHHHHHHHHHHHhhhccccccchheeehhHHHHHHHHHHHHHHHHHHHHH
Confidence 33322 23333332223 457888899989999999999999874 345666666666666665544433
No 89
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.93 E-value=7.2e-24 Score=200.98 Aligned_cols=345 Identities=12% Similarity=0.016 Sum_probs=226.8
Q ss_pred CcceeeecceeeCC-ccccchhhHHHHHHHHHHhhhhhhhccccCCCCchHHHHHHHHHHHHHHHHHhccccHHHHHHHH
Q 039541 101 DTTIISDWSLECAG-SSILSGLPSSCFFIGCLLGGLALSTLGDSSSLGRKKLLFLSCFAMSITALATIFANNIWIYSTIR 179 (521)
Q Consensus 101 ~~~i~~~~~~~~~~-~~~~~~~~~s~~~lg~~i~~~~~g~l~dr~~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r 179 (521)
.|.+.+|+|++.+| . |.+.++++.++++++++.|+++|| +|.|+++.++.+.+++.+++.++++++..+.+.|
T Consensus 49 ~p~L~~elglT~~qv~----G~I~s~F~ysYal~qIp~GlLaDr--lG~K~vL~l~~l~Wsl~t~L~~fa~Sl~~L~i~R 122 (511)
T TIGR00806 49 TPYLLTVLNFTEETVT----NEIIPVLPYSHLAVLVPVFLLTDY--LRYKPVLVLQALSFVCVWLLLLLGTSVWHMQLME 122 (511)
T ss_pred HHHHHHHcCCCHHHhc----chHHHHHHHHHHHHHHHHHHHHHH--hCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 78999999999977 6 999999999999999999999999 9999999999999999999999999999999999
Q ss_pred HHhhccchhhHhhhhhheeeeecCcchhHHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHH--HHHHHHHHhhhcee
Q 039541 180 FVAGFFRAPIMTSVIVLLSEMVSKRWRGQVVIIGFTFFSFGLVSLPAVAYLSRGSSWKMLYVWT--SIPSIVCCIIIYPF 257 (521)
Q Consensus 180 ~l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~i~~~i~~~~~~~~wr~~f~~~--~~~~~~~~~~~~~~ 257 (521)
++.|++.|... +...++..|+|+++|+++.++..++..+|.+++++++..+..+|||+.+.+. ...+....++..++
T Consensus 123 ~llGvaEA~~~-A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~qll~s~gWr~y~~Ln~Isl~s~~~a~~~a~~ 201 (511)
T TIGR00806 123 VFYSVTMAARI-AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQLLVTLGWISYSTLNIISLVFMTFSVFLALF 201 (511)
T ss_pred HHHHHHHHHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999 9999999999999999999999999999999999884436678999855443 22233333366677
Q ss_pred eecchhHHHhcCCHHHHHHHHHHHhhhcCCCCCCCccccccCCCCCccccCCC-----cccccccHHHHhccHHHHHHHH
Q 039541 258 ISESPRWLFIHGHEAEAMAVLKRLASRSNYQSDYGLESCCLSNMPPKAKNVIP-----KLDLYSSLKDLFNRKWALRRLL 332 (521)
Q Consensus 258 ~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~l~~~~~~~~~~~ 332 (521)
+|..++.+.-+++.+.... . .++. +.. ..++...+.+..+. -......+++..+++.+....+
T Consensus 202 LP~~~~sl~f~~~~~~~~~----~---~~~~-~~~----~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~y~n~~vl~WSl 269 (511)
T TIGR00806 202 LKRPKRSLFFNRLEDVRGA----L---PCEL-DQM----VPGPGGKLEDYLGTCRDSFLVRMLSELVTIYRNPQLLLWSL 269 (511)
T ss_pred CCCCchhhhhccccccccc----c---cccc-ccC----CCCCccccchhhhhhhhHHHHHHHHHHHHHhcCcchhhhhH
Confidence 8865543332221110000 0 0000 000 00000000000000 0112234556677776554444
Q ss_pred HHHHHHHHHH-HHHHhHHhhccCCC-cc--HHHHHHHHHHHhHhHHHHHHHHHhhcCCchHHH--HHHHHHHHHHHHHHh
Q 039541 333 TIMALAFGIG-VVYFGLLLGVGNLS-FN--IYLSLAFNGLLDIPAYLLTFILIERWSRKSSIL--TFCILSGTCSAICVA 406 (521)
Q Consensus 333 ~~~~~~~~~~-~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~--~~~~~~~i~~~~~~~ 406 (521)
-..+...+.. ...|...++-...+ .+ ....-.+..+.+.++.+..|++-.++.+.-.+. +..++.+..++++..
T Consensus 270 Wwa~a~~g~~qv~~Y~Q~LW~~v~~~~~~yNG~veA~~tllga~~a~~ag~~~~~w~~~~~l~l~v~s~~~~gll~~m~~ 349 (511)
T TIGR00806 270 WWVFNSAGYYLITYYVHTLWGTLDESLNKYNGAVDAASTLLGAITSFIAGFVNIRWARWSKLLIAVVSAIQAGLVFWMSQ 349 (511)
T ss_pred HHHHHhhHHHHHHHHHHHHHHHcCCCccccCCHHHHHHHHHHHHHHHHHHhhcCCchhhHHHHHHHHHHHHHHHhhhhhc
Confidence 4444444433 33333333321111 11 112223334455567778888866664432333 333344444444444
Q ss_pred cCCchHHHHHHHHHHHHHHHHHHHHHHHHhhccccCchhhhhhhHHHHHhhhhhhhHHHH
Q 039541 407 IGDEQEVLQIGLELASFFSACVAFNVLLVFGTELFTTCVRNSTTSLVRQAVNLGAAFSPV 466 (521)
Q Consensus 407 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~ 466 (521)
..+. |..++..++++..+....++...-++.....+.-|...|+.+++..+-..+-..
T Consensus 350 t~~I--w~~Y~~yvlf~~~y~flitia~~~iA~~L~~~~~aLvFGiNtfvAl~LQtilT~ 407 (511)
T TIGR00806 350 SHDI--WVLYVTYVLFRGIYQFLVPIATFQIASSLSKELCALVFGINTFVATALKTIITA 407 (511)
T ss_pred ccch--HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccceEEEEecHHHHHHHHHHheEE
Confidence 3333 788888999999888888888888888877777799999888777554444333
No 90
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=99.93 E-value=1.3e-23 Score=192.34 Aligned_cols=317 Identities=14% Similarity=0.065 Sum_probs=245.3
Q ss_pred CcceeeecceeeCCccccchhhHHHHHHHHHHhhhhhhhccccCCCCchHHHHHHHHHHHHHHHHHh---ccccHHHHHH
Q 039541 101 DTTIISDWSLECAGSSILSGLPSSCFFIGCLLGGLALSTLGDSSSLGRKKLLFLSCFAMSITALATI---FANNIWIYST 177 (521)
Q Consensus 101 ~~~i~~~~~~~~~~~~~~~~~~~s~~~lg~~i~~~~~g~l~dr~~~Grr~~l~~~~~~~~~~~~~~~---~~~~~~~l~~ 177 (521)
+|++++.|+++..|. +++..+++.|+.+.+++.|++.+| +|+|+.++.|+.++++++.+.. -..++..+++
T Consensus 36 ip~l~~~f~ls~~~a----~liqfaff~gYf~~~lpa~~~~kk--~gyk~gi~lgL~l~avg~~lF~pAa~~~~y~~FL~ 109 (422)
T COG0738 36 IPHLKEVFDLTYFEA----SLIQFAFFGGYFIMSLPAGLLIKK--LGYKAGIVLGLLLYAVGAALFWPAASSKSYGFFLV 109 (422)
T ss_pred HHHHHHHhCccHHHH----HHHHHHHHHHHHHHhccHHHHHHH--hhhHHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHH
Confidence 899999999999888 999999999999999999999999 9999999999999999999984 5678999999
Q ss_pred HHHHhhccchhhHhhhhhheeeeecCcchhHHHHHHHHHHHHHHHHHHHH-HHhhc-------------------CCchh
Q 039541 178 IRFVAGFFRAPIMTSVIVLLSEMVSKRWRGQVVIIGFTFFSFGLVSLPAV-AYLSR-------------------GSSWK 237 (521)
Q Consensus 178 ~r~l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~i~~~i-~~~~~-------------------~~~wr 237 (521)
+-|+.|.|.+...+.+..++..+.++++..+.+++.+.+.++|.+++|++ ++++. ...|+
T Consensus 110 ~lFila~Gi~~LetaaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g~~lils~~~~~~~~~~~~~~~~~~~~~v~ 189 (422)
T COG0738 110 ALFILASGIGLLETAANPYVTLLGKPESAAFRLNLAQAFNGLGAILGPLLGSSLILSGVALTMSAAQILAIKGADASSVQ 189 (422)
T ss_pred HHHHHHhhhHHHHhccchHHHHhCCchhHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhhccCHHHHHHHHHHHHHhhh
Confidence 99999999999999999999999999999999999999999999999999 44433 12488
Q ss_pred HHHHHHHHHHHHHHhhhcee--eecchhHHHhcCCHHHHHHHHHHHhhhcCCCCCCCccccccCCCCCccccCCCccccc
Q 039541 238 MLYVWTSIPSIVCCIIIYPF--ISESPRWLFIHGHEAEAMAVLKRLASRSNYQSDYGLESCCLSNMPPKAKNVIPKLDLY 315 (521)
Q Consensus 238 ~~f~~~~~~~~~~~~~~~~~--~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (521)
++|...+...+++. +.... .|+.+. .. .+.....+
T Consensus 190 ~pYl~~~~~lvll~-v~~~~~k~p~~~~-----~~-------------------------------------~~~~~~~~ 226 (422)
T COG0738 190 FPYLILAGLLVLLA-VLILLSKLPDLQV-----AA-------------------------------------PSLGASGS 226 (422)
T ss_pred hHHHHHHHHHHHHH-HHHHhccCCcCCc-----cc-------------------------------------cccccccc
Confidence 88888777766666 33222 222210 00 00000001
Q ss_pred ccHHHHhccHHHHHHHHHHHHHHHHHHHHHHhHHhhccC-CCccH---HHHHHHHHHHhHhHHHHHHHHHhhcCCchHHH
Q 039541 316 SSLKDLFNRKWALRRLLTIMALAFGIGVVYFGLLLGVGN-LSFNI---YLSLAFNGLLDIPAYLLTFILIERWSRKSSIL 391 (521)
Q Consensus 316 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~---~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~ 391 (521)
....+++++|+++...+..+++-.........++.++.+ .+.+. .........+.++|++++.++..|+...|.+.
T Consensus 227 ~~~~~l~~~~~~~~gvl~~FlYVG~Eva~gsfl~~y~~~~~g~~~~~aa~~~s~~~~~~~vGRFig~~lm~~~~~~k~La 306 (422)
T COG0738 227 AGLSSLFQNKHLRLGVLAIFLYVGAEVAIGSFLVSYLEELLGLNEQQAAYYLSFFWVGFMVGRFIGSALMSRIKPEKYLA 306 (422)
T ss_pred chHHHHHhChHHHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHH
Confidence 156789999998777766665555444444444444444 44332 33344555778899999999999999999988
Q ss_pred HHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHHHHHhhccccCchhhhhhhHHHHHhhhhhhhHHHHHHHhh
Q 039541 392 TFCILSGTCSAICVAIGDEQEVLQIGLELASFFSACVAFNVLLVFGTELFTTCVRNSTTSLVRQAVNLGAAFSPVLISAG 471 (521)
Q Consensus 392 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~~ 471 (521)
....+..+.++...+.... +.....++.|++.+..+|..++...+..| ++ ....|.......+|+++.|++.|+.
T Consensus 307 f~a~~~ill~~~~~l~~g~---v~~~~l~~ig~F~simfPTIfslal~~l~-~~-ts~~s~~l~maivGGAiiP~l~G~i 381 (422)
T COG0738 307 FYALIAILLLLAVALIGGV---VALYALFLIGLFNSIMFPTIFSLALKNLG-EH-TSVGSGLLVMAIVGGAIIPPLQGVI 381 (422)
T ss_pred HHHHHHHHHHHHHHHhcCh---HHHHHHHHHHHHhHHHHHHHHHHHHhccC-cc-ccccceeeeeheecchHHHHHHHHH
Confidence 8887777777777776654 56677888899999999999999999999 44 3334444456788999999999974
No 91
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=99.93 E-value=4.8e-23 Score=203.72 Aligned_cols=359 Identities=14% Similarity=0.104 Sum_probs=224.8
Q ss_pred CcceeeecceeeCCccccchhhHHHHHHHHHHhhhhhhhccccCCCCchHHHHHHHHHHHHHHHHHhccccHHHHHHHHH
Q 039541 101 DTTIISDWSLECAGSSILSGLPSSCFFIGCLLGGLALSTLGDSSSLGRKKLLFLSCFAMSITALATIFANNIWIYSTIRF 180 (521)
Q Consensus 101 ~~~i~~~~~~~~~~~~~~~~~~~s~~~lg~~i~~~~~g~l~dr~~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~ 180 (521)
++.|.+|+|-++ +. .|+.+.+.++.+++.++.|+++|. ||||.+++.+.++..+|+++++.++|...++++..
T Consensus 67 l~~I~~diG~~~-~~----~w~~~~~~l~~av~~~~~G~LSDl--fGRr~~~i~g~~l~vvG~Iv~atA~~~~~~iag~~ 139 (599)
T PF06609_consen 67 LPYINADIGGSD-NW----SWFSTAWTLASAVSFPFVGRLSDL--FGRRYFFIIGSLLGVVGSIVCATAQNMNTFIAGMV 139 (599)
T ss_pred HHHHHHhcCCCc-cc----hHHHHHHHHHHHHHHHhhHHHHHH--hcchHHHHHHHHHHHhHHHHhhcCCcHHHHHHHHH
Confidence 678888998764 33 899999999999999999999999 99999999999999999999999999999999999
Q ss_pred HhhccchhhHhhhhhheeeeecCcchhHHHHHHHHHHHHHHHHHHHHH-HhhcCCchhHHHHHHHHHHHHHHhhhceeee
Q 039541 181 VAGFFRAPIMTSVIVLLSEMVSKRWRGQVVIIGFTFFSFGLVSLPAVA-YLSRGSSWKMLYVWTSIPSIVCCIIIYPFIS 259 (521)
Q Consensus 181 l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~i~~~i~-~~~~~~~wr~~f~~~~~~~~~~~~~~~~~~~ 259 (521)
+.|+|.|.... ....++|..|.|.|+...++...........++.++ .+..+.+|||.|++.++...+.+++.+++..
T Consensus 140 l~GvgaG~~~~-~~~~isEl~p~k~R~~~~~~~~~~~i~~~~~~~~ia~~~~~~~~WRw~~~~~~i~~~i~~vl~~~fY~ 218 (599)
T PF06609_consen 140 LYGVGAGVQEL-AALAISELVPNKWRGLGLAIASIPFIITTWISPLIAQLFAAHSGWRWIFYIFIIWSGIALVLIFFFYF 218 (599)
T ss_pred HHHHhhHHHHH-HHHHHHHhcccchhhhHhHHHHHHHHhhhcccHHHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHhC
Confidence 99999876654 455689999999999888777766656555677774 4455679999999998887776644443332
Q ss_pred cchhHHHhcCC---HHHHHHHHHHHh-------------h-hcCCCCCCCccccccC-CCCC--------ccccCCCccc
Q 039541 260 ESPRWLFIHGH---EAEAMAVLKRLA-------------S-RSNYQSDYGLESCCLS-NMPP--------KAKNVIPKLD 313 (521)
Q Consensus 260 esp~~~~~~~~---~~~~~~~~~~~~-------------~-~~~~~~~~~~~~~~~~-~~~~--------~~~~~~~~~~ 313 (521)
. |++...+++ ..+..+.++.+. . .-.+..+++..+...- .+.. --=|.....+
T Consensus 219 P-P~~~~~~~~~~s~~~~l~~lD~IG~~L~~~Gl~LfLlgl~wgG~~~~~W~Sa~VIa~lviG~~~Lv~F~~wE~~~~~~ 297 (599)
T PF06609_consen 219 P-PPRAQLHGRKLSKREQLKELDWIGIFLFIAGLALFLLGLSWGGYPYYPWKSAHVIAPLVIGFVLLVAFVVWEWFGAPK 297 (599)
T ss_pred C-CchhhhccccCcHHHHHHHhhHHHHHHHHHHHHHHHHHHhccCCCCCCCCCccchhhHHHHHHHHHHHHHhhhhccCC
Confidence 2 222221211 111111111110 0 0011111111110000 0000 0000000000
Q ss_pred ccccHHHHhccHH-HHHHHHHHHHHHHHH-HHHHHhHHhhccCCCcc------HHHHHHHHHHHhHhHHHHHHHHHhhcC
Q 039541 314 LYSSLKDLFNRKW-ALRRLLTIMALAFGI-GVVYFGLLLGVGNLSFN------IYLSLAFNGLLDIPAYLLTFILIERWS 385 (521)
Q Consensus 314 ~~~~~~~l~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~g~l~dr~g 385 (521)
.+.-..+++|+++ +...+++.++..... ...++........++.+ ........+++..+|.++.+.+..+++
T Consensus 298 ~Pl~P~~Lf~~~r~~~~~lvi~fi~G~~~~s~~~l~p~~~~~vf~~d~~~~~~~~~~s~~~~fg~~~g~~i~g~l~~~ir 377 (599)
T PF06609_consen 298 DPLFPHRLFKDRRGFAALLVISFISGMNFFSVNILWPQQVVNVFGSDPISITEIGWISSPVGFGSCAGAVILGLLFSKIR 377 (599)
T ss_pred CCcCCHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCcccceeehhhhhHHHHHHHHHHHHHHHHHHcc
Confidence 1112345777743 222222222222111 11112222212122222 223344556677788888999999888
Q ss_pred CchHH-HHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHHHHHhhccccCchhhhhhhHHHHHhhhhhhhHH
Q 039541 386 RKSSI-LTFCILSGTCSAICVAIGDEQEVLQIGLELASFFSACVAFNVLLVFGTELFTTCVRNSTTSLVRQAVNLGAAFS 464 (521)
Q Consensus 386 ~~~~~-~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~ 464 (521)
|-|.. +++.+++.+++..+......+....+...++.+++.+.........+.-..|++..+++.|+...++.+|+.++
T Consensus 378 ~~Kw~li~~~~~~ta~~Gama~~~~~n~~~~i~~~~l~g~giG~~~~~~~~~~ql~~p~~~ig~a~gL~~s~R~~GGsIg 457 (599)
T PF06609_consen 378 HIKWQLIFGSVLMTAFCGAMAAVRPDNKNAAIAFLVLAGFGIGGILVPAIVIAQLIVPDEDIGTATGLTGSIRSIGGSIG 457 (599)
T ss_pred chhHHHHHHHHHHHHHHHHHHHccCCCcchHHHHHHHHHHhHHHHHHHHHHeeEeeeCchHHHHHHHHHHHHHHHhhHHH
Confidence 76554 46666666655555554333333445677788888888888888888888999999999999999998888776
Q ss_pred HHHH
Q 039541 465 PVLI 468 (521)
Q Consensus 465 p~~~ 468 (521)
..+.
T Consensus 458 ~aIy 461 (599)
T PF06609_consen 458 YAIY 461 (599)
T ss_pred HHHH
Confidence 5543
No 92
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.92 E-value=4.3e-23 Score=206.06 Aligned_cols=372 Identities=9% Similarity=-0.026 Sum_probs=234.0
Q ss_pred cceeeCCccccchhhHHHHHHHHHHhhhhhhhccccCCC-CchHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHhhccc
Q 039541 108 WSLECAGSSILSGLPSSCFFIGCLLGGLALSTLGDSSSL-GRKKLLFLSCFAMSITALATIFANNIWIYSTIRFVAGFFR 186 (521)
Q Consensus 108 ~~~~~~~~~~~~~~~~s~~~lg~~i~~~~~g~l~dr~~~-Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~ 186 (521)
+|++..+. +++.+.+.++..++++++|+++|| + |||+++.++.++.+++.++.+++++++.++++|++.|+|.
T Consensus 43 lg~s~~~a----g~~~~~~~~~~~~~~~~~G~laDr--~~G~~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~g~g~ 116 (475)
T TIGR00924 43 LGFSQEQA----FIIFGAYSALVYLLTSVGWWFGDR--VWGTKKTMVLGGIVLMLGHFMLAMSIYPDLIFYGLGTIAVGS 116 (475)
T ss_pred CCCCHHHH----HHHHHHHHHHHHHHHhhHHHHHHh--hcchHHHHHHHHHHHHHHHHHHHhcccHhHHHHHHHHHHhcc
Confidence 89998776 999999999999999999999998 6 9999999999999999999999999999999999999999
Q ss_pred hhhHhhhhhheeeeecCcc---hhHHHHHHHHHHHHHHHHHHHH-HHhhcCCchhHHHHHHHHHHHHHHhhhceeee---
Q 039541 187 APIMTSVIVLLSEMVSKRW---RGQVVIIGFTFFSFGLVSLPAV-AYLSRGSSWKMLYVWTSIPSIVCCIIIYPFIS--- 259 (521)
Q Consensus 187 g~~~~~~~~~i~~~~~~~~---rg~~~~~~~~~~~~G~~i~~~i-~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~~~--- 259 (521)
|...+...++++|++|+++ |+++++++..+.++|.++||.+ +++.++.|||+.|++.++..++.. +.+.+.+
T Consensus 117 g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~l~g~l~~~~g~~~~f~~~~~~~~~~~-l~~~~~~~~~ 195 (475)
T TIGR00924 117 GLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFISPLLAGVIAENYGYHVGFNLAAVGMVIGL-LTFFAGRHML 195 (475)
T ss_pred ccccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHH-HHHHHccccc
Confidence 9999999999999998754 8889999999999999999999 677777899999998876555443 3332222
Q ss_pred -cchhHHHhcCCHHHHHHHHHH------------HhhhcCCCCCCCcccc-ccC----CCCCccccCCCcccccccHHHH
Q 039541 260 -ESPRWLFIHGHEAEAMAVLKR------------LASRSNYQSDYGLESC-CLS----NMPPKAKNVIPKLDLYSSLKDL 321 (521)
Q Consensus 260 -esp~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~-~~~----~~~~~~~~~~~~~~~~~~~~~l 321 (521)
+.|+.. .+.+.++.+..... ... ..... ...... ... .........++. .+..+-
T Consensus 196 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~ 268 (475)
T TIGR00924 196 RDIGSVP-DPLSGQGKTYGKLLLALLAALALVFFCAW-LMHHV-VIANILLMTVTLAVIIFFFRLAFKPR----LDAVAR 268 (475)
T ss_pred ccCCCCC-CCcchhhhhhHHHHHHHHHHHHHHHHHHH-HHhcc-HHHHHHHHHHHHHHHHHHHHHHHhcc----CCHHHH
Confidence 222100 00000110000000 000 00000 000000 000 000000000000 000010
Q ss_pred hccHHHHHHHHHHHHHHHHHHHHHHhHHhhccC-C-----C--ccHHHHHHHHHHHhHhHHHHHHHHHhhcCC-----ch
Q 039541 322 FNRKWALRRLLTIMALAFGIGVVYFGLLLGVGN-L-----S--FNIYLSLAFNGLLDIPAYLLTFILIERWSR-----KS 388 (521)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-----~--~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~-----~~ 388 (521)
.|...+...++...+++.........++.+.++ . + ........+..+.-++..++..++..|++| +.
T Consensus 269 ~~~~~~l~l~~~~~~~~~~~~Q~~s~l~l~~~~~~~~~~~~~~ip~~~~~~~n~~~iil~~p~~~~~~~~l~~~~~~~~~ 348 (475)
T TIGR00924 269 NKMYAYIVLFLEAVVFWVLYAQMPTSLNFFADNNMHHEMLGMSVPVIWFQSLNPFWVVVGSPVLAMIWTRLGRKGKDPTT 348 (475)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhccccccceEECHHHHHhhhHHHHHHHHHHHHHHHHHHHhCCCCCCc
Confidence 111112222222333333333333333433222 1 1 123444455555555555554443333333 33
Q ss_pred HH--HHHHHHHHHHHHHHHhc----C---CchHHHHHHHHHHHHHHHHHHHHHHHHhhccccCchhhhhhhHHHHHhhhh
Q 039541 389 SI--LTFCILSGTCSAICVAI----G---DEQEVLQIGLELASFFSACVAFNVLLVFGTELFTTCVRNSTTSLVRQAVNL 459 (521)
Q Consensus 389 ~~--~~~~~~~~i~~~~~~~~----~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~ 459 (521)
.. .+++++.++++..+.+. . ..+.++.....++.+++.....|....+..+..|++.||+.+|+......+
T Consensus 349 ~~k~~~G~~l~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~~~~~ge~~~~p~~~~~~~~~aP~~~~g~~~g~~~l~~~~ 428 (475)
T TIGR00924 349 PLKFTLGMLFCGASFLTFAASIWFADAGGLTSPWFMVLIYLFQTLGELMISPLGLSWWTKIAPQRLMGQMLGMWFLAQAM 428 (475)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCHHHHHHHHHHHHHHHHH
Confidence 33 67777777776666531 1 123377888899999999999999999999999999999999999999999
Q ss_pred hhhHHHHHHHhh--ccchhHHHHHHHHHHHHHhHhh
Q 039541 460 GAAFSPVLISAG--RQNEFLSFGVFGLVVFCFGFFV 493 (521)
Q Consensus 460 g~~~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 493 (521)
|..+++.+.... ..++...|...++..++..++.
T Consensus 429 g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 464 (475)
T TIGR00924 429 GSLLGGYLATFGAVPQGVTGVFGKIGLVTLLVGVVM 464 (475)
T ss_pred HHHHHHHHHHHHhcccchhhHHHHHHHHHHHHHHHH
Confidence 999998887652 2235555666666555555444
No 93
>PTZ00207 hypothetical protein; Provisional
Probab=99.92 E-value=6e-23 Score=204.53 Aligned_cols=380 Identities=12% Similarity=0.013 Sum_probs=241.7
Q ss_pred CcceeeecceeeCCccccchhhHHHHHHHHHHhhhhhhhccccCCCCchHHHHHHHHHHHHHHHHHhcc------ccHHH
Q 039541 101 DTTIISDWSLECAGSSILSGLPSSCFFIGCLLGGLALSTLGDSSSLGRKKLLFLSCFAMSITALATIFA------NNIWI 174 (521)
Q Consensus 101 ~~~i~~~~~~~~~~~~~~~~~~~s~~~lg~~i~~~~~g~l~dr~~~Grr~~l~~~~~~~~~~~~~~~~~------~~~~~ 174 (521)
.|.+++++|++.++. +++.++. ....+++++.|++.|| +|+|++++++.+++++++++++++ ++++.
T Consensus 50 s~~L~~~lgls~~~l----~~i~svg-~~~g~~~lp~G~L~Dr--~G~R~vllig~ll~~iG~ll~ala~~~~i~~s~~~ 122 (591)
T PTZ00207 50 SGAMQARYNLTQRDL----STITTVG-IAVGYFLLPYSFIYDY--LGPRPIFVLSMTVFCLGTLLFALTFQEVIEGSVVR 122 (591)
T ss_pred HHHHHHHhCcCHHHH----HHHHHHH-HHHHHHHHHHHHHHHH--hCcHHHHHHHHHHHHHHHHHHHHHhcccccCcHHH
Confidence 578999999999776 8887764 3445678889999999 999999999999999999999997 68999
Q ss_pred HHHHHHHhhccchhhHhhhhhheeeeecCcchhHHHHHHHHHHHHHHHH-HHHHHHhhcCCchhHHHHHHHHHHHHHHhh
Q 039541 175 YSTIRFVAGFFRAPIMTSVIVLLSEMVSKRWRGQVVIIGFTFFSFGLVS-LPAVAYLSRGSSWKMLYVWTSIPSIVCCII 253 (521)
Q Consensus 175 l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~i-~~~i~~~~~~~~wr~~f~~~~~~~~~~~~~ 253 (521)
+.+.|++.|+|.+...+.....+.+|+| ++||++.|+...+.++|.++ +++...+.. .+|+..|++.+++.++..++
T Consensus 123 l~l~r~l~G~G~~~~~~~~~~~i~~~Fp-~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~~-~~~~~~fl~l~vl~~vv~ll 200 (591)
T PTZ00207 123 LSVYNGLMTLGCMLFDLGAVVTVLSVFP-SNRGAVVAIMKTFTGLGSAILGSIQLAFFS-DNTSAYFFFLMSFALVVGIL 200 (591)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999997 78999999999999999986 455544433 47999999888888887766
Q ss_pred hceeeecch--hHHHhcCCHHHHHHHHHH---------------------------------------------------
Q 039541 254 IYPFISESP--RWLFIHGHEAEAMAVLKR--------------------------------------------------- 280 (521)
Q Consensus 254 ~~~~~~esp--~~~~~~~~~~~~~~~~~~--------------------------------------------------- 280 (521)
.+.++++.| ++..++++.+++++..++
T Consensus 201 ~~~~vr~p~~~~~~~~~~~~~~~~~~~~~~~~~~y~~q~~p~~~f~~~~~i~~~l~~yl~~~~~~~~~~~~~~~~~~~~~ 280 (591)
T PTZ00207 201 AIVFMRLPPFHLTGYQEKHLDEEEKAQRLMRKGVYLKQKAPMWRFVYGFVILIILIVFLPLQGALVAYLKLGSNFKVGFA 280 (591)
T ss_pred HHhheeCCcchhhcccccCCCHHHHHHHhhhhhhhhhcCCCceehhhHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHH
Confidence 666665554 332222111111111000
Q ss_pred ---H---------------hhhcCCCCCCC-cccccc-C---CCCCccc-----cCC-CcccccccHHHHhccHHHHHHH
Q 039541 281 ---L---------------ASRSNYQSDYG-LESCCL-S---NMPPKAK-----NVI-PKLDLYSSLKDLFNRKWALRRL 331 (521)
Q Consensus 281 ---~---------------~~~~~~~~~~~-~~~~~~-~---~~~~~~~-----~~~-~~~~~~~~~~~l~~~~~~~~~~ 331 (521)
+ .+ .+..++++ .+..+. + +...++. +.+ ..++..+++++.+++..+|..+
T Consensus 281 ~v~~~lll~~p~l~ip~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~t~~q~l~~~d~Wll~ 359 (591)
T PTZ00207 281 VTVIVLTVIFPFMAFPLTTFD-GKRPHDDSDGKAKEHVEAGEEVSAAEDKVVETDVDYIAPQFQETFIEGLKTARLWCLL 359 (591)
T ss_pred HHHHHHHHHHHHHhhhHHHhc-cCCcCCCccccccccccccccccccccccccccccCCCCCCcchHHHHHhchhHHHHH
Confidence 0 00 00000000 000000 0 0000000 000 1122223788888888877655
Q ss_pred HHHHHHHHHHHHHHHhHHhhccCC-Cc--cH--HH-HHHHHHHHhHhHHHHHHHHHhhcCCc--------h-HHHHHHHH
Q 039541 332 LTIMALAFGIGVVYFGLLLGVGNL-SF--NI--YL-SLAFNGLLDIPAYLLTFILIERWSRK--------S-SILTFCIL 396 (521)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~--~~-~~~~~~~~~~~~~~~~g~l~dr~g~~--------~-~~~~~~~~ 396 (521)
+..++.+.......+-+....+.+ |. +. .. ...+.++++.+|++.+|++.....+| . .+.+..+
T Consensus 360 ~~~~cg~g~gl~~~~N~~qI~~sl~g~~~~~~~~~~~vsL~si~~~~GRl~~g~~~~~~~~~~~~~r~prt~~l~~~~~- 438 (591)
T PTZ00207 360 WSIFCCVGAHFVIIFNARFIYTALAGEAPDDALNTLLTVLNGVGSAVGRLCMSYFEIWSQKRRAEDRVPITIALFIPSV- 438 (591)
T ss_pred HHHHHhhCchheeeecHHHHHHHhcCCCCCccceeeehhhhhHHHHhhHHHHHHHHHHHHhhccccccchhHHHHHHHH-
Confidence 544433332211111122222222 22 11 11 45677889999999998887222211 2 2333333
Q ss_pred HHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHHHHHhhccccCchhhhhhhHHHHHhhhhhhhHH-HHHHHh-h---
Q 039541 397 SGTCSAICVAIGDEQEVLQIGLELASFFSACVAFNVLLVFGTELFTTCVRNSTTSLVRQAVNLGAAFS-PVLISA-G--- 471 (521)
Q Consensus 397 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~-p~~~~~-~--- 471 (521)
+.++.+++.+..+. ..+++..++.|++.|..+++....++|+|. ++-|+-+-+.....-+|+.+- -.+.|. .
T Consensus 439 ~~~~~lll~~~~p~--~~L~~~~~lvg~~~G~~~~~~~~i~selFg-k~~g~~yN~~~~a~pigs~~~n~~l~G~~Yd~e 515 (591)
T PTZ00207 439 CIITMLTLFLTLPK--AALPLPYFIAAFANGFMAATIALVTRTIFA-KDPAKHYNFCFLGSVLSAIFLNRLLYGEWYTQQ 515 (591)
T ss_pred HHHHHHHHHHHCCc--cHhHHHHHHHHHHhhHhHHHHHHHHHHHhc-cchHHHhhHHhHHHHHHHHHHHHHHHHHHHHHH
Confidence 55555555554432 267888999999999999999999999999 665777766666666665543 333332 0
Q ss_pred -----------ccchhHHHHHHHHHHHHHhHhhh
Q 039541 472 -----------RQNEFLSFGVFGLVVFCFGFFVV 494 (521)
Q Consensus 472 -----------~~~~~~~~~~~~~~~~~~~~~~~ 494 (521)
..-+..+|++++.+++++.+...
T Consensus 516 a~k~~~~~C~G~~C~~~~~~v~~~~~~~g~~~s~ 549 (591)
T PTZ00207 516 ADKLGQDVCTERVCVVMPLAFLLGLSFLAFITST 549 (591)
T ss_pred HhhCCCCeeCCceeeHhHHHHHHHHHHHHHHHHh
Confidence 11256788888888888777643
No 94
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.92 E-value=2.9e-23 Score=187.30 Aligned_cols=323 Identities=15% Similarity=0.153 Sum_probs=210.6
Q ss_pred ccchhhHHHHHHHHHHhhhhhhhccccCCCCchHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHhhccchhhHhhhhhh
Q 039541 117 ILSGLPSSCFFIGCLLGGLALSTLGDSSSLGRKKLLFLSCFAMSITALATIFANNIWIYSTIRFVAGFFRAPIMTSVIVL 196 (521)
Q Consensus 117 ~~~~~~~s~~~lg~~i~~~~~g~l~dr~~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~ 196 (521)
...|.+.|.|.+++.++++.+|.++|| +|||++++++++..++...+.+++.|+..++++|++.|+..| ......++
T Consensus 68 ~yaGflGSsF~ilQ~~sS~~~G~~SD~--yGRkpvll~c~~~va~s~ll~~~S~~F~afv~aR~l~Gi~kg-nl~v~rAi 144 (451)
T KOG2615|consen 68 FYAGFLGSSFSILQFISSPLWGCLSDR--YGRKPVLLACLIGVALSYLLWALSRNFAAFVLARFLGGIFKG-NLSVIRAI 144 (451)
T ss_pred hhhhhHhhHHHHHHHHhhhhhhhhhhh--hCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccC-chHHHHHH
Confidence 666999999999999999999999999 999999999999999999999999999777777999999998 67888899
Q ss_pred eeeeecCcchhHHHHHHHHHHHHHHHHHHHHH-Hhhc-C-CchhHHH----HHHHHHHHHHHhhhceeeecchhHHHhcC
Q 039541 197 LSEMVSKRWRGQVVIIGFTFFSFGLVSLPAVA-YLSR-G-SSWKMLY----VWTSIPSIVCCIIIYPFISESPRWLFIHG 269 (521)
Q Consensus 197 i~~~~~~~~rg~~~~~~~~~~~~G~~i~~~i~-~~~~-~-~~wr~~f----~~~~~~~~~~~~~~~~~~~esp~~~~~~~ 269 (521)
++|..++|+|+++++.++..+++|.++||.+| ++.. . ..=+++| ++..++.........+++|||-+.. +
T Consensus 145 isdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~f~~~~g~~p~alP~~~v~i~a~~~v~~~~~~lpETL~~r---k 221 (451)
T KOG2615|consen 145 ISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQFSSISGSYPFALPCLLVFILAAGDVTFFPWFLPETLPLR---K 221 (451)
T ss_pred HHhhcChhhccceeeeeehhhhcchhhcchhhhHHHhhHhhhccCchHHHHHHHHHHHHHHHHHHHHhCCccccch---h
Confidence 99999999999999999999999999999995 4443 0 1112222 2233333332335567889984311 1
Q ss_pred CHHHHHHHHHHHhhhcCCCCCCCccccccCCCCCccccCCCcccccccHHHHhccHHHHHHHH-------HHHHHHHHHH
Q 039541 270 HEAEAMAVLKRLASRSNYQSDYGLESCCLSNMPPKAKNVIPKLDLYSSLKDLFNRKWALRRLL-------TIMALAFGIG 342 (521)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-------~~~~~~~~~~ 342 (521)
+.++... ..+. .+. +.+. .+.. ...-...+||+.....+. ..+.+.....
T Consensus 222 ~~~~~~~-~~~~---~~~-------~~~~--~~~~----------~~~~v~~lrn~p~~~~i~~~~i~~l~~~ly~~l~s 278 (451)
T KOG2615|consen 222 RNDEHST-LQEA---ADD-------RLAL--LKFA----------RIFKVAALRNPPLLDFISVLRIFGLHYFLYLELFS 278 (451)
T ss_pred hcccccc-hhhh---hhh-------hhhh--cchh----------hhhhhhhhcCccccchHHHHHHHHHHHHHHHHHHH
Confidence 1111000 0000 000 0000 0000 001112333333222111 1111111111
Q ss_pred HHHHhHHhh-ccCCCccHHHHHHHHHHHhHhHHHHHHHHHhhcCCch-----HHHHHHHHHHHHHHHHHhcCCchHHHHH
Q 039541 343 VVYFGLLLG-VGNLSFNIYLSLAFNGLLDIPAYLLTFILIERWSRKS-----SILTFCILSGTCSAICVAIGDEQEVLQI 416 (521)
Q Consensus 343 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~-----~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 416 (521)
..-++.+.+ -+.+++++...+-+....++.+.++.+.+..+..|.+ .+.....++.-..+++...... ..+.
T Consensus 279 ~~~~t~~~l~~~rfg~ss~~~G~vl~~tGl~m~~~ql~~~~~l~~~~~~~~a~l~~~l~~~vP~~llls~~~~~--~~l~ 356 (451)
T KOG2615|consen 279 GLENTVLFLTHGRFGYSSMQQGKVLSTTGLLMLVIQLALVPILPRYKGNIKAVLLFSLLLIVPAFLLLSLARTP--VVLY 356 (451)
T ss_pred HHHhhHHHhhcCccCCChhhheeeeehhhHHHHHHHHhccccccccccchhhHHHHHHHHHHHHHHHHhccccc--hhhh
Confidence 112222222 2456777666665555556666666666666655444 3333333333333333333333 5677
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccccCchhhhhhhHHHHHhhhhhhhHHHHHHHh
Q 039541 417 GLELASFFSACVAFNVLLVFGTELFTTCVRNSTTSLVRQAVNLGAAFSPVLISA 470 (521)
Q Consensus 417 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~ 470 (521)
....+..+......+....++....|++.||+++|+....+.++.++||.+.|.
T Consensus 357 ~~s~l~sf~~A~~vt~Lt~Lv~~~~~~~qrG~~~Gi~~Sl~alaRaiGPlv~g~ 410 (451)
T KOG2615|consen 357 LGSTLKSFSTASVVTCLTSLVHKYGPQSQRGTLNGIFRSLGALARAIGPLVSGV 410 (451)
T ss_pred HHHHHHHHHHHHhhHHHHHHHHhcCCcccchHHHHHHHHHHHHHHHhhhhhhhe
Confidence 778888888888888899999999999999999999999999999999999975
No 95
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.91 E-value=5.5e-22 Score=194.74 Aligned_cols=364 Identities=10% Similarity=-0.042 Sum_probs=243.6
Q ss_pred HHHHHHHHHHHHHHHhhhhccccCCcccccCCcccccCCccccccccCcceecCCCCcceeeecceeeCCccccchhh--
Q 039541 45 VILISLLLIFESQQTFISVYTDEEPTWHCINNTTTCSSSSDICTLSKSAWAWDRPSDTTIISDWSLECAGSSILSGLP-- 122 (521)
Q Consensus 45 ~~~~~l~~~~~~~~~~~~~~~~~~p~~~c~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~-- 122 (521)
+..+...++..+.......+. +|.+.+|.|.+.++. |++
T Consensus 3 ~~~~~~ly~~~g~~~~~~~p~-----------------------------------lp~~l~~~g~~~~~i----Gl~~~ 43 (390)
T TIGR02718 3 VITLGLLYLSQGIPIGLAMDA-----------------------------------LPTLLREDGAPLTAL----AFLPL 43 (390)
T ss_pred HHHHHHHHHHHHhHHHHHHHH-----------------------------------HHHHHHHcCCCHHHH----HHHHH
Confidence 455666778888887777777 899999999999666 987
Q ss_pred HHHHHHHHHHhhhhh-hhccccCCCCchHHHHHHHHHH-HHHHHHHh---cccc-HHHHHHHHHHhhccchhhHhhhhhh
Q 039541 123 SSCFFIGCLLGGLAL-STLGDSSSLGRKKLLFLSCFAM-SITALATI---FANN-IWIYSTIRFVAGFFRAPIMTSVIVL 196 (521)
Q Consensus 123 ~s~~~lg~~i~~~~~-g~l~dr~~~Grr~~l~~~~~~~-~~~~~~~~---~~~~-~~~l~~~r~l~G~~~g~~~~~~~~~ 196 (521)
.+...+...+.++++ ++..|| +||||..++...+. ++.....+ ...+ ...++..-++.++..+...+...++
T Consensus 44 ~~l~~~~~~l~~p~~~~~~~~~--~g~r~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~d~~~d~~ 121 (390)
T TIGR02718 44 VGLPWVVKFLWAPLVDNWWSWR--LGRRRSWVLPMQCLVSACLASLALVGPDVAGAGWAVGLLACASLASATQDIATDGM 121 (390)
T ss_pred HHHHHHHHHHHHHHHhcccccc--CCcchhHHHHHHHHHHHHHHHHHcCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 466678888888888 557999 99999976655332 22222222 2222 3344555566667777788888888
Q ss_pred eeeeecCcchhHHHHHHHHHHHHHHHHHHHH-HHhhcCCchhHHHHHHHHHHHHHHhhhceeeecchhHHHhcCCHHHHH
Q 039541 197 LSEMVSKRWRGQVVIIGFTFFSFGLVSLPAV-AYLSRGSSWKMLYVWTSIPSIVCCIIIYPFISESPRWLFIHGHEAEAM 275 (521)
Q Consensus 197 i~~~~~~~~rg~~~~~~~~~~~~G~~i~~~i-~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~~~esp~~~~~~~~~~~~~ 275 (521)
..|..++++++...+....+..+|.++|+.. +++.+..|||.+|++.+++.++..+..++..|++++ +.+.++
T Consensus 122 ~~~~~~~~~~~~~~~~~~~g~~lG~~~g~~~~~~l~~~~gw~~~f~~~a~l~~~~~~~~~~~~~~~~~----~~~~~~-- 195 (390)
T TIGR02718 122 AAEHFNGRTLAKGNAVQIAGVMIGFFGGGAGTLVLFGKFGQRPAFLLVACVPLASLVCVLWLKDRAVA----SPEAPL-- 195 (390)
T ss_pred HHHhCCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHcCCCCcC----ccccch--
Confidence 8898888888988888888889999998877 677888899999999998887766444333333221 000000
Q ss_pred HHHHHHhhhcCCCCCCCccccccCCCCCccccCCCcccccccHHHHhccHHHHHHHHHHHHHHHHHHHHHHhHHhhccCC
Q 039541 276 AVLKRLASRSNYQSDYGLESCCLSNMPPKAKNVIPKLDLYSSLKDLFNRKWALRRLLTIMALAFGIGVVYFGLLLGVGNL 355 (521)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (521)
+...++++++|+|..+......++........+...+.++.+.
T Consensus 196 -------------------------------------~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~ 238 (390)
T TIGR02718 196 -------------------------------------ARRASLFRFFRRPLAWSLLALALLSAMTAVSGFGLSKLYLVDA 238 (390)
T ss_pred -------------------------------------hhHHHHHHHHcCcCHHHHHHHHHHHHHHHHHHHHHhhHHHHhc
Confidence 0012567788888766666555555554444444455566667
Q ss_pred CccHHHHHHHHH----HHhHhHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHhcC----CchHHHHHHHHHHHHHHHH
Q 039541 356 SFNIYLSLAFNG----LLDIPAYLLTFILIERWSRKSSILTFCILSGTCSAICVAIG----DEQEVLQIGLELASFFSAC 427 (521)
Q Consensus 356 ~~~~~~~~~~~~----~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~i~~~~~~~~~----~~~~~~~~~~~~~~~~~~~ 427 (521)
|.+....+.... +..+++.++.|++.||+|+|+.+..+..+.++..+...... ............+.++..+
T Consensus 239 G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 318 (390)
T TIGR02718 239 GWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRAGLWRTFILGVGLAGSLALLWFAQAAFWLAPGIAVAWSCSAFGSLITG 318 (390)
T ss_pred CCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHcccCCcHHHHHHHHHHHHHHHH
Confidence 777665554432 34556788999999999999988877766533332222111 1111222333344455667
Q ss_pred HHHHHHHHhhccccCc-hhhhhhhHHHHHhhhhhhhHHHHHHHhh--ccchhHHHHHHHHHHHHHhHh
Q 039541 428 VAFNVLLVFGTELFTT-CVRNSTTSLVRQAVNLGAAFSPVLISAG--RQNEFLSFGVFGLVVFCFGFF 492 (521)
Q Consensus 428 ~~~~~~~~~~~~~~~~-~~r~~~~~~~~~~~~~g~~~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 492 (521)
..++.......+..++ +.+++.+++.+...++|..++|.+.|.. ..++...|...+++.+++.+.
T Consensus 319 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~g~~~~G~l~~~~G~~~~f~~~~~~~l~a~~~ 386 (390)
T TIGR02718 319 ITSVAIYTAFMRFAGDGDQAGTDVTAVQSTRDLGELIASSIAGYLTDRFGYAGGFLSGTVLAVLAILL 386 (390)
T ss_pred HHHHHHHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHH
Confidence 7777777776666665 8889999999999999999999999863 235666776666666655443
No 96
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.91 E-value=2.4e-23 Score=213.56 Aligned_cols=278 Identities=15% Similarity=0.129 Sum_probs=197.2
Q ss_pred CcceeeecceeeCCccccchhhHHHHHHHHHHhhhhhhhccccCCCCchHHHHHHHHHHHHHHHHHhccc----------
Q 039541 101 DTTIISDWSLECAGSSILSGLPSSCFFIGCLLGGLALSTLGDSSSLGRKKLLFLSCFAMSITALATIFAN---------- 170 (521)
Q Consensus 101 ~~~i~~~~~~~~~~~~~~~~~~~s~~~lg~~i~~~~~g~l~dr~~~Grr~~l~~~~~~~~~~~~~~~~~~---------- 170 (521)
++.++++|+++..+. |++.+.+.++++++.++.|+++|| +|||+++.+++++++++++++++.+
T Consensus 56 l~~iek~F~lss~~~----G~i~s~~~i~~~~~~i~v~~~~~r--~~r~~~i~~g~ll~~lg~ll~alphf~~~~y~~~~ 129 (633)
T TIGR00805 56 LTTIERRFKLSTSSS----GLINGSYEIGNLLLIIFVSYFGTK--LHRPIVIGIGCAIMGLGSFLLSLPHFLSGRYSYST 129 (633)
T ss_pred chhhhhhhCCCCCcc----eeeeehhhHHHHHHHHHHHHhhcc--cCcceEEEecHHHHHHHHHHHhChHHhcCCccccc
Confidence 899999999999777 999999999999999999999999 9999999999999999999988763
Q ss_pred -----------------------------------------cHHHHHHHHHHhhccchhhHhhhhhheeeeecCcchhHH
Q 039541 171 -----------------------------------------NIWIYSTIRFVAGFFRAPIMTSVIVLLSEMVSKRWRGQV 209 (521)
Q Consensus 171 -----------------------------------------~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~rg~~ 209 (521)
.+..++++|+++|+|.+..++...+++.|++|+++|+++
T Consensus 130 ~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~~i~d~~~~~~~~~~ 209 (633)
T TIGR00805 130 TVSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGISYIDDFAKSKNSPLY 209 (633)
T ss_pred cccccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCchhhhccCCccccHHH
Confidence 256788999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHH-HHhhcCC----------------------chhHHHHHHHHHHHHHHhhhceeeecc-hhHH
Q 039541 210 VIIGFTFFSFGLVSLPAV-AYLSRGS----------------------SWKMLYVWTSIPSIVCCIIIYPFISES-PRWL 265 (521)
Q Consensus 210 ~~~~~~~~~~G~~i~~~i-~~~~~~~----------------------~wr~~f~~~~~~~~~~~~~~~~~~~es-p~~~ 265 (521)
++++..+..+|.++|+++ +.+.+.+ +||..|++.+++.++..+. ++++|++ |+..
T Consensus 210 ~~i~~~~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaWwl~Fli~g~l~~l~~v~-l~~~p~~lp~~~ 288 (633)
T TIGR00805 210 IGILESIAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAWWIGFLICGGVALLTSIP-FFFFPKALPKEG 288 (633)
T ss_pred HHHHHHHHHhhhHHHHHHHHHHHhcccccccCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHH-HHhCccccCCcc
Confidence 999999999999999998 4444321 2778899888888887733 4455553 2110
Q ss_pred HhcCCHHHHHHHHHHHhhhcCCCCCCCccccccCCCCCccccCCCcccccccHHHHhccHHHHHHHHHHHHHHHHHHHHH
Q 039541 266 FIHGHEAEAMAVLKRLASRSNYQSDYGLESCCLSNMPPKAKNVIPKLDLYSSLKDLFNRKWALRRLLTIMALAFGIGVVY 345 (521)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 345 (521)
.+.+.+..++ + . .+.. +.+...+......+....++.++++|.++...+..++.........
T Consensus 289 -~~~~~~~~~~---~--~-~~~~-----------~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~ 350 (633)
T TIGR00805 289 -KRVNVDVHET---E--K-LEKS-----------EDKSRKKNSDITKDFPKIIKRLLCNPIYMLVILAQVIDSLAFNGYI 350 (633)
T ss_pred -cccchhhhhh---h--c-cccc-----------ccccchhhhhhHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHH
Confidence 0000000000 0 0 0000 0000000000111122357789999988877777766666665555
Q ss_pred HhHHhhcc-CCCccHHHHHHHHH---H-HhHhHHHHHHHHHhhcCC--chHHHHHHHHHHHHHHH
Q 039541 346 FGLLLGVG-NLSFNIYLSLAFNG---L-LDIPAYLLTFILIERWSR--KSSILTFCILSGTCSAI 403 (521)
Q Consensus 346 ~~~~~~~~-~~~~~~~~~~~~~~---~-~~~~~~~~~g~l~dr~g~--~~~~~~~~~~~~i~~~~ 403 (521)
..+|.+++ .++.++.....+.+ + +.++|.+++|+++||++. |+.+.++.++..++.+.
T Consensus 351 ~~lP~yl~~~~g~s~~~ag~l~~~~~i~~~~vG~~l~G~l~~r~~~~~~~~~~~~~~~~~~~~~~ 415 (633)
T TIGR00805 351 TFLPKYLENQYGISSAEANFLIGVVNLPAAGLGYLIGGFIMKKFKLNVKKAAYFAICLSTLSYLL 415 (633)
T ss_pred HHHHHHHHHHcCCcHHHHHHHhhhhhhhHHHHHHhhhhheeeeecccHHHHHHHHHHHHHHHHHH
Confidence 55666555 46766655544332 2 456788999999999984 45666666655555433
No 97
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.90 E-value=5e-22 Score=199.54 Aligned_cols=373 Identities=11% Similarity=-0.008 Sum_probs=223.9
Q ss_pred CcceeeecceeeCCccccchhhHHHHHHHHHHhhhhhhhccccCCC-CchHHHHHHHHHHHHHHHHHhccc-cHHHHHHH
Q 039541 101 DTTIISDWSLECAGSSILSGLPSSCFFIGCLLGGLALSTLGDSSSL-GRKKLLFLSCFAMSITALATIFAN-NIWIYSTI 178 (521)
Q Consensus 101 ~~~i~~~~~~~~~~~~~~~~~~~s~~~lg~~i~~~~~g~l~dr~~~-Grr~~l~~~~~~~~~~~~~~~~~~-~~~~l~~~ 178 (521)
...+.+++|++.++. +++.+.+........+++|+++|| + |||++++++.++.+++.+++++++ +.+.++++
T Consensus 45 ~~yl~~~lg~s~~~a----~~~~~~~~~~~~~~~~~~G~LaDr--~~G~r~~~~~g~~~~~ig~~l~~~~~~~~~~l~~~ 118 (500)
T PRK09584 45 AVYLVKQLGMSEADS----ITLFSSFSALVYGLVAIGGWLGDK--VLGTKRVIMLGAIVLAIGYALVAWSGHDAGIVYMG 118 (500)
T ss_pred HHHHHHHcCCCHHHH----HHHHHHHHHHHHHHHHHHHHHHHh--ccchHHHHHHHHHHHHHHHHHHHHhcccHHHHHHH
Confidence 345568899988666 788877776666667899999999 9 999999999999999999998874 56777889
Q ss_pred HHHhhccchhhHhhhhhheeeeecCcc--hhHHHHHHHHHHHHHHHHHHHH-HHhhcCCchhHHHHHHHHHHHHHHh---
Q 039541 179 RFVAGFFRAPIMTSVIVLLSEMVSKRW--RGQVVIIGFTFFSFGLVSLPAV-AYLSRGSSWKMLYVWTSIPSIVCCI--- 252 (521)
Q Consensus 179 r~l~G~~~g~~~~~~~~~i~~~~~~~~--rg~~~~~~~~~~~~G~~i~~~i-~~~~~~~~wr~~f~~~~~~~~~~~~--- 252 (521)
|+++|++.|...+...+++.|++|+++ |+.++++++.+.++|.+++|.+ +++.++.|||+.|++.++..++..+
T Consensus 119 ~~l~gig~g~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~~gp~i~g~l~~~~g~~~~F~i~~i~~~i~~i~~~ 198 (500)
T PRK09584 119 MATIAVGNGLFKANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSFFSMLATPWLAAKYGWSVAFALSVVGMLITVVNFA 198 (500)
T ss_pred HHHHHHhhhcccCCHHHHHHHhcCCCchhhhhcchHHHHHHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999998654 4568889999999999999998 7777888999999998765444331
Q ss_pred hhceeeecchhHHHhcCCHHHHHHHH-----------HHHhhhcCCCCCCCcccccc---CCCCCccccCCCcccccccH
Q 039541 253 IIYPFISESPRWLFIHGHEAEAMAVL-----------KRLASRSNYQSDYGLESCCL---SNMPPKAKNVIPKLDLYSSL 318 (521)
Q Consensus 253 ~~~~~~~esp~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 318 (521)
.....++|.++.. .+.+.+...... ..... .+.+ ........ .......... ...
T Consensus 199 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~~-------~~~ 267 (500)
T PRK09584 199 FCQRWVKQYGSKP-DFEPINYRKLLLTIVGVVALIAIATWLL-HNQE--IARMALGVVALGIVVIFGKEA-------FAM 267 (500)
T ss_pred HhHHHhccCCCCC-CccccchhhHHHHHHHHHHHHHHHHHHH-hcch--HHHHHHHHHHHHHHHHHHHHH-------hhc
Confidence 2222333321100 000001000000 00000 0000 00000000 0000000000 000
Q ss_pred HHHhccHHHHHHHHHHHHHHHHHHHHHHhHHhhc-----c--C---CCc--cHHHHHHHHHHHhHhHHHHH----HHHHh
Q 039541 319 KDLFNRKWALRRLLTIMALAFGIGVVYFGLLLGV-----G--N---LSF--NIYLSLAFNGLLDIPAYLLT----FILIE 382 (521)
Q Consensus 319 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~--~---~~~--~~~~~~~~~~~~~~~~~~~~----g~l~d 382 (521)
.+.-++|. ...+ ..++........+...+..+ + + .|. .......+..+..++..++. +++.+
T Consensus 268 ~~~~~~~~-~~~~-~~~~~~i~f~~~~~q~~~~l~~~~~~~~~~~~~g~~i~~~~~~s~n~i~iil~~p~~~~~~~~l~~ 345 (500)
T PRK09584 268 KGAARRKM-IVAF-ILMLEAIIFFVLYSQMPTSLNFFAIRNVEHSILGIAVEPEQYQALNPFWIMIGSPILAAIYNKMGD 345 (500)
T ss_pred CHHHHHHH-HHHH-HHHHHHHHHHHHHHHhccHHHHHHHHhccccccceEECHHHHHHHhHHHHHHHHHHHHHHHHHhCc
Confidence 00111111 1111 11111111112222222211 1 1 121 23344445555555555555 44444
Q ss_pred hcCCchHHHHHHHHHHHHHHHHHhcCCc-------hHHHHHHHHHHHHHHHHHHHHHHHHhhccccCchhhhhhhHHHHH
Q 039541 383 RWSRKSSILTFCILSGTCSAICVAIGDE-------QEVLQIGLELASFFSACVAFNVLLVFGTELFTTCVRNSTTSLVRQ 455 (521)
Q Consensus 383 r~g~~~~~~~~~~~~~i~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 455 (521)
|.+..+.+.+++++.+++++.+...... +.++.....++.+++.....|....++.+..|++.||.++|+...
T Consensus 346 r~~~~~~~~~G~~l~~l~f~~l~~~~~~~~~~~~vs~~~~~~~~~l~~~ge~~~~p~g~s~~~~~aP~~~rg~~~g~~~l 425 (500)
T PRK09584 346 RLPMPHKFAIGMVLCSGAFLVLPLGAKFANDAGIVSVNWLIASYGLQSIGELMISGLGLAMVAQLVPQRLMGFIMGSWFL 425 (500)
T ss_pred CCCcHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCcHHHHHHHHHHHHH
Confidence 5555577888888888888776554321 125677888999999999999999999999999999999998877
Q ss_pred hhhhhhhHHHHHHHhh------------ccchhHHHHHHHHHHHHHhHh
Q 039541 456 AVNLGAAFSPVLISAG------------RQNEFLSFGVFGLVVFCFGFF 492 (521)
Q Consensus 456 ~~~~g~~~~p~~~~~~------------~~~~~~~~~~~~~~~~~~~~~ 492 (521)
...+|..++..+.+.. ..++...|...++.+++..++
T Consensus 426 ~~a~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~a~~ 474 (500)
T PRK09584 426 TTAGAALIAGYVANLMAVPDNVTDPLMSLEVYGRVFLQIGIATAVIAVL 474 (500)
T ss_pred HHHHHHHHHHHHHHHhccccccccchhhhhhHHHHHHHHHHHHHHHHHH
Confidence 7767776665555321 112456677777665544433
No 98
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=99.90 E-value=1.3e-20 Score=184.32 Aligned_cols=367 Identities=12% Similarity=0.075 Sum_probs=242.9
Q ss_pred cceeeecceeeCCccccchhhHHHHHHHHHHhhhhhhhccccC--CCCchHHHHHH-HHHHHHHHHHHhccccHH-----
Q 039541 102 TTIISDWSLECAGSSILSGLPSSCFFIGCLLGGLALSTLGDSS--SLGRKKLLFLS-CFAMSITALATIFANNIW----- 173 (521)
Q Consensus 102 ~~i~~~~~~~~~~~~~~~~~~~s~~~lg~~i~~~~~g~l~dr~--~~Grr~~l~~~-~~~~~~~~~~~~~~~~~~----- 173 (521)
+.+.+++|.+.... +++..+..+...+.+|+.|+++||+ |+||||.++++ .+...++.++.+++++++
T Consensus 28 ~~yl~~lg~~~~~~----~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il~g~~~~~~~l~ll~~~~~~~~~~~~ 103 (477)
T TIGR01301 28 TPYVQELGIPHAWA----SIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAAGAALVAFAVILIGFAADIGHLFGD 103 (477)
T ss_pred HHHHHHcCCCHHHH----HHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHHHHHHHHHHHHHHHHHHhCchhhhhccc
Confidence 44567889988555 9999999999999999999999942 49999998774 666667777777876653
Q ss_pred ------------HHHHHHHHhhccchhhHhhhhhheeeeecCcch--hHHHHHHHHHHHHHHHHHHHHHHhh---cC---
Q 039541 174 ------------IYSTIRFVAGFFRAPIMTSVIVLLSEMVSKRWR--GQVVIIGFTFFSFGLVSLPAVAYLS---RG--- 233 (521)
Q Consensus 174 ------------~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r--g~~~~~~~~~~~~G~~i~~~i~~~~---~~--- 233 (521)
.++++-.+..++.....+...++++|.+|+++| +.+.++.+...++|.++|+.+|.+. ..
T Consensus 104 ~~~~~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~~~~a~~~~~~~~~lG~ilg~~~g~~~~~~~~~~~ 183 (477)
T TIGR01301 104 NLDKKTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARRTRIANAYFSFFMAIGNVLGYAAGAYSGLYKIFPF 183 (477)
T ss_pred cccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhccc
Confidence 223333344557777888889999999998865 6899999999999999999986543 11
Q ss_pred ----------CchhHHHHHHHHHHHHHHhhhceeeecchhHHHhcCCHHHHHHHHHHHhhhcCCCCCCCccccccCCCCC
Q 039541 234 ----------SSWKMLYVWTSIPSIVCCIIIYPFISESPRWLFIHGHEAEAMAVLKRLASRSNYQSDYGLESCCLSNMPP 303 (521)
Q Consensus 234 ----------~~wr~~f~~~~~~~~~~~~~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (521)
.+.|..|++.++..++..++..+..+|.|... .++.++ + + . +.
T Consensus 184 ~~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~E~~~~~--~~~~~~--~---~----~----------------~~ 236 (477)
T TIGR01301 184 TKTEACGVSCANLKSCFLIDIILLAILTYIALSAVKENPLIG--SDDFIN--S---E----A----------------AP 236 (477)
T ss_pred ccccccccccchHHHHHHHHHHHHHHHHHHHeeeeeccCCCc--cccchh--h---h----c----------------cc
Confidence 16788999999988888878888899975310 000000 0 0 0 00
Q ss_pred ccccCCCcccccccHHHHhcc-HHHHHHHHHHHHHHHHHHHHH-HhHHhhccC-CC--------ccH-----HHHHHHHH
Q 039541 304 KAKNVIPKLDLYSSLKDLFNR-KWALRRLLTIMALAFGIGVVY-FGLLLGVGN-LS--------FNI-----YLSLAFNG 367 (521)
Q Consensus 304 ~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~--------~~~-----~~~~~~~~ 367 (521)
.++. ......++-++.+.+- +..++..++.++.|++..... |..++.-++ ++ ++. .......+
T Consensus 237 ~~~~-~~~~~~~~i~~~~~~mP~~m~~l~~vqffsW~a~f~~~~y~T~~vg~~v~~~~~~~~~~y~~gvr~G~~~l~~~s 315 (477)
T TIGR01301 237 PSKH-GEEAFFGELFGAFKYLPRPVWILLLVTCLNWIAWFPFILFDTDWMGREVYGGSVNQGAKYDDGVRAGAFGLMLNS 315 (477)
T ss_pred cccc-chhhhHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHcCCCCcchhHHHHHHHHHHHHHHHHH
Confidence 0000 0000001122223332 445556666777777664433 333332211 11 011 12234445
Q ss_pred HHhHhHHHHHHHHHhhcCC-chHHHHHHHHHHHHHHHHHhcCCc------------------h-HHHHHHHHHHHHHHHH
Q 039541 368 LLDIPAYLLTFILIERWSR-KSSILTFCILSGTCSAICVAIGDE------------------Q-EVLQIGLELASFFSAC 427 (521)
Q Consensus 368 ~~~~~~~~~~g~l~dr~g~-~~~~~~~~~~~~i~~~~~~~~~~~------------------~-~~~~~~~~~~~~~~~~ 427 (521)
+...+.+++..++.+|+|+ |++..++.++.++++....+.... . .+..++.+.+.|+...
T Consensus 316 ~~~~i~s~~l~~l~~~~g~~k~~~~~s~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Gi~~A 395 (477)
T TIGR01301 316 VVLGITSIGMEKLCRGWGAGKRLWGIVNIILAICLAATVLVTYVAKNSRYYDGDGESLPPPTGIKASALIVFAILGIPLA 395 (477)
T ss_pred HHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhhhhccccccccccccCcchhhHHHHHHHHHHhhHHHH
Confidence 5556777788899999985 677688877777777766644320 0 1456677888899999
Q ss_pred HHHHHHHHhhccccCc--hhhhhhhHHHHHhhhhhhhHHHHHHHh----hccchhHHHHHHHHHHHHHhHhh-hccccCC
Q 039541 428 VAFNVLLVFGTELFTT--CVRNSTTSLVRQAVNLGAAFSPVLISA----GRQNEFLSFGVFGLVVFCFGFFV-VFLPETI 500 (521)
Q Consensus 428 ~~~~~~~~~~~~~~~~--~~r~~~~~~~~~~~~~g~~~~p~~~~~----~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 500 (521)
..+.+.++++++..++ +..|..+|+.|.+..+...+..+..|. ...+....+.+.++.++++++.. +.+|+.+
T Consensus 396 ~~~siPfal~s~~~~~~~~~~G~~mgilN~~I~lpQii~sl~~g~~~~~~g~~~~~~~~~~gv~~~~aa~~~~~~~~~~~ 475 (477)
T TIGR01301 396 ITYSIPFALASIRSSNLGAGQGLSMGVLNLAIVIPQIIVSLGSGPWDQLFGGGNLPAFVVGAVAAFVSGLLALILLPRPR 475 (477)
T ss_pred HHHHHhHHHHHHHccccCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHcCCCCeeHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 9999999999999995 445999999999988877766655543 22345566777777777777664 5566654
No 99
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=99.90 E-value=2.2e-21 Score=174.94 Aligned_cols=336 Identities=16% Similarity=0.109 Sum_probs=260.9
Q ss_pred CcceeeecceeeCCccccchhhHHHHHHHHHHhhhhhhhccccCCCCchHHHHHHHHHHHHHHHHHhccccHHHHHHHHH
Q 039541 101 DTTIISDWSLECAGSSILSGLPSSCFFIGCLLGGLALSTLGDSSSLGRKKLLFLSCFAMSITALATIFANNIWIYSTIRF 180 (521)
Q Consensus 101 ~~~i~~~~~~~~~~~~~~~~~~~s~~~lg~~i~~~~~g~l~dr~~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~ 180 (521)
+++|++|+|++.+.. |++++...+...+.+++..+++.| +|.++.+..++++.++|.++-... +.+.++.+-.
T Consensus 35 L~~Ir~~~gls~s~a----GlLTtLPll~fg~~ap~a~~Lar~--~g~er~l~~~Llli~~G~~iR~~~-~~~~L~~gt~ 107 (395)
T COG2807 35 LDEIRQDLGLSFSVA----GLLTTLPLLAFGLFAPAAPRLARR--FGEERSLFLALLLIAAGILIRSLG-GLPLLFLGTL 107 (395)
T ss_pred HHHHHHHhcccHHHH----HHHHHHHHHHHHHHHhhhHHHHHH--HhhHHHHHHHHHHHHHHHHHHhcc-cHHHHHHHHH
Confidence 899999999999777 999999999999999999999999 999999999999999999999887 8889999999
Q ss_pred HhhccchhhHhhhhhheeeeecCcchhHHHHHHHHHHHHHHHHHHHHH-HhhcCC-chhHHHHHHHHHHHHHHhhhceee
Q 039541 181 VAGFFRAPIMTSVIVLLSEMVSKRWRGQVVIIGFTFFSFGLVSLPAVA-YLSRGS-SWKMLYVWTSIPSIVCCIIIYPFI 258 (521)
Q Consensus 181 l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~i~~~i~-~~~~~~-~wr~~f~~~~~~~~~~~~~~~~~~ 258 (521)
+.|.|.+...+..+..+.+.+| |+-+..++++.+..++|..+++.+. .+.++. +||....+.+.++++.+ +.|+
T Consensus 108 l~G~gIav~nVLLPslIK~~Fp-k~~~~mtglYs~sl~~~aaLaa~lavpla~~~~gW~~aL~~WAl~allAl-~~Wl-- 183 (395)
T COG2807 108 LAGAGIAVINVLLPSLIKRDFP-KRVGLMTGLYSTSLGAGAALAAALAVPLAQHSGGWRGALGFWALLALLAL-LIWL-- 183 (395)
T ss_pred HHHhhHHHHHHhhhHHHHhhcc-cchhhHHhHHHHHHHHHHHHHhhhhhHHHHhhccHHHHHHHHHHHHHHHH-HHHh--
Confidence 9999999999999999999998 6789999999999999999988774 344443 79999999999999887 5543
Q ss_pred ecchhHHHhcCCHHHHHHHHHHHhhhcCCCCCCCccccccCCCCCccccCCCcccccccHHHHhccHHHHHHHHHHHHHH
Q 039541 259 SESPRWLFIHGHEAEAMAVLKRLASRSNYQSDYGLESCCLSNMPPKAKNVIPKLDLYSSLKDLFNRKWALRRLLTIMALA 338 (521)
Q Consensus 259 ~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 338 (521)
|...| .+.. + .... ..+-..++|+|.-|...+...+..
T Consensus 184 Pq~~r-----~~~~----------~-~~~~--------------------------~~~~~~vw~~~~aW~vtLfmGlqS 221 (395)
T COG2807 184 PQALR-----EQAA----------S-IATK--------------------------LVSVRKVWRSPLAWQVTLFMGLQS 221 (395)
T ss_pred hhccc-----cccc----------c-cccc--------------------------cccccccccCchhHHHHHHHHhhH
Confidence 33211 0000 0 0000 012235789998777777777777
Q ss_pred HHHHHHHHhHHhhccCCCccHHHHH---HHHHHHhHhHHHHHHHHHhhc-CCchHHHHHHHHHHHHHHHHHhcCCchHHH
Q 039541 339 FGIGVVYFGLLLGVGNLSFNIYLSL---AFNGLLDIPAYLLTFILIERW-SRKSSILTFCILSGTCSAICVAIGDEQEVL 414 (521)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~g~l~dr~-g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 414 (521)
+........+|.++.+.|.+....+ .+..+.+++.++....+.+|. ++|........++.++...+.+.+....+
T Consensus 222 ~~~Y~~~~WLP~ili~~G~sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n~r~~~~~~~~~~l~G~~G~~~~P~~~~~- 300 (395)
T COG2807 222 LLYYIVIGWLPAILIDRGLSAAEAGSLLSLMQLAQLPTALLIPLLARRSKNQRPLVVLALLLMLVGLVGLLLAPGQLPI- 300 (395)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHhhhhHHH-
Confidence 7766666667888888888876655 445567778889999999975 46667777777778887777776666432
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccccC-chhhhhhhHHHHHhhhhhhhHHHHHHHhhc---cchhHHHHHHHHHHHHHh
Q 039541 415 QIGLELASFFSACVAFNVLLVFGTELFT-TCVRNSTTSLVRQAVNLGAAFSPVLISAGR---QNEFLSFGVFGLVVFCFG 490 (521)
Q Consensus 415 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~r~~~~~~~~~~~~~g~~~~p~~~~~~~---~~~~~~~~~~~~~~~~~~ 490 (521)
. ..++.|++.++.++...+++.+..+ ++..+.-.|+.+.++++-+.+||++.|+.+ .++...+..++.+.+...
T Consensus 301 l--w~~llG~G~G~~F~laL~li~~rs~~a~~Aa~LSgmaQg~GYllAa~GP~l~G~lhDa~gsw~~~~~~l~~~~i~m~ 378 (395)
T COG2807 301 L--WALLLGLGQGGAFPLALTLILLRSSDAAIAAALSGMAQGVGYLLAAFGPWLFGFLHDATGSWSAPLVLLALATLLML 378 (395)
T ss_pred H--HHHHHhCccchHHHHHHHHHHhhcCChHHHHHHHHHhhhhhHHHHhhhhhhHhHHHHhcCChHHHHHHHHHHHHHHH
Confidence 2 2588899999999988888877664 445567778888888999999999999733 345555555555554444
Q ss_pred Hh
Q 039541 491 FF 492 (521)
Q Consensus 491 ~~ 492 (521)
+.
T Consensus 379 i~ 380 (395)
T COG2807 379 IF 380 (395)
T ss_pred HH
Confidence 33
No 100
>PRK09669 putative symporter YagG; Provisional
Probab=99.89 E-value=8.2e-21 Score=189.43 Aligned_cols=324 Identities=13% Similarity=0.054 Sum_probs=219.0
Q ss_pred CcceeeecceeeCCccccchhhHHHHHHHHHHhhhhhhhccccC--CCCch-HHHHHHHHHHHHHHHHHhcccc------
Q 039541 101 DTTIISDWSLECAGSSILSGLPSSCFFIGCLLGGLALSTLGDSS--SLGRK-KLLFLSCFAMSITALATIFANN------ 171 (521)
Q Consensus 101 ~~~i~~~~~~~~~~~~~~~~~~~s~~~lg~~i~~~~~g~l~dr~--~~Grr-~~l~~~~~~~~~~~~~~~~~~~------ 171 (521)
.+.+.+++|++.... |.+.++..+..++..|+.|+++||+ |+||| +.++.+.+..+++.++....++
T Consensus 33 ~~~~t~~~gls~~~~----g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~il~~~~~~~i~~~l~f~~p~~~~~~~ 108 (444)
T PRK09669 33 AYFYTDVFGLSAAIM----GTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPYLLWFAIPFGVVCLLTFYTPDFGATGK 108 (444)
T ss_pred HHHHHHhcCCCHHHH----HHHHHHHHHHHHcccceeeEeeecCCCCCCCcchhHHHHHHHHHHHHHHHHhCCCCCcchH
Confidence 455667899998555 9999999999999999999999996 68885 5556677777777766555543
Q ss_pred HHHHHHHHHHhhccchhhHhhhhhheeeee-cCcchhHHHHHHHHHHHHHHHHHHHH-----HHhhc---CCchhHHHHH
Q 039541 172 IWIYSTIRFVAGFFRAPIMTSVIVLLSEMV-SKRWRGQVVIIGFTFFSFGLVSLPAV-----AYLSR---GSSWKMLYVW 242 (521)
Q Consensus 172 ~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~-~~~~rg~~~~~~~~~~~~G~~i~~~i-----~~~~~---~~~wr~~f~~ 242 (521)
++.+++..++.+.+.........++..|+. ++++|++..++...+..+|..+++.+ ..+.. ..+|+..+.+
T Consensus 109 ~~~~~~~~~l~~~~~t~~~ip~~al~~~~t~~~~eR~~l~~~r~~~~~~G~~i~~~~~~pl~~~~~~~~~~~g~~~~~~i 188 (444)
T PRK09669 109 IIYACVTYILLSLVYTAINVPYCAMPGAITNDPRERHSLQSWRFALSFIGGLIVSVIALPLVDILGKGDEQKGYFYAMMV 188 (444)
T ss_pred HHHHHHHHHHHHHHHHhhcchHHHhHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHH
Confidence 455666666777766667777778899988 56889998888888888877776543 22221 3579988888
Q ss_pred HHHHHHHHHhhhceeeecchhHHHhcCCHHHHHHHHHHHhhhcCCCCCCCccccccCCCCCccccCCCcccccccHHHHh
Q 039541 243 TSIPSIVCCIIIYPFISESPRWLFIHGHEAEAMAVLKRLASRSNYQSDYGLESCCLSNMPPKAKNVIPKLDLYSSLKDLF 322 (521)
Q Consensus 243 ~~~~~~~~~~~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 322 (521)
.+++.++..++.++..+|.++. + + +++.+..++++.++
T Consensus 189 ~~ii~~v~~~~~~~~~~e~~~~-----~-~------------------------------------~~~~~~~~~~~~~~ 226 (444)
T PRK09669 189 MGLLGVVLFFCCFFMTKERYTP-----E-V------------------------------------DNSSSVWKDLKLLL 226 (444)
T ss_pred HHHHHHHHHHHHhCCeEEecCC-----C-C------------------------------------cCCCCHHHHHHHHh
Confidence 8888777765566666663210 0 0 00011123677889
Q ss_pred ccHHHHHHHHHHHHHHHHHHHHHHhHHhhccCCCccH---HHHHHHHHHHhHhHHHHHHHHHhhcCCchHHHHHHHHHHH
Q 039541 323 NRKWALRRLLTIMALAFGIGVVYFGLLLGVGNLSFNI---YLSLAFNGLLDIPAYLLTFILIERWSRKSSILTFCILSGT 399 (521)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~i 399 (521)
+||.++..+...++.............++.+..-.+. ........+..+++.++.+++.||+|+|+....+..+..+
T Consensus 227 ~n~~~~~l~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gk~~~~~~~~~~~~~ 306 (444)
T PRK09669 227 GNSQWRIMFIFNVVLLTAVVTRGGATLYYVNYVLLRPDLATLFLVTGMIAGLFGALLSERLLGKFDRVRAFKWTIVAFVI 306 (444)
T ss_pred CCchHHHHHHHHHHHHHHHHHHhhhhheeeeeecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHH
Confidence 9998776655544444443322222233322221111 1222333456677888899999999999998888766655
Q ss_pred HHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHHHHHhhccccCc-------hhhhhhhHHHHHhhhhhhhHHHHHHHh
Q 039541 400 CSAICVAIGDEQEVLQIGLELASFFSACVAFNVLLVFGTELFTT-------CVRNSTTSLVRQAVNLGAAFSPVLISA 470 (521)
Q Consensus 400 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~r~~~~~~~~~~~~~g~~~~p~~~~~ 470 (521)
..+.+.+.+..+.+...+..++.+++.+...+..+++.+|..+. +..|...|..+....+|..++|.+.|.
T Consensus 307 ~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~am~ad~~d~~e~~~G~r~~g~~~s~~~~~~klg~alg~~i~g~ 384 (444)
T PRK09669 307 LSALIFFIPPSNVWLIFALNILFNFIQNLTTPLQWSMFSDVVDYEEKRSGRRLDGLVFSTNLFAIKLGLAIGGAVVGW 384 (444)
T ss_pred HHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcCcchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44434333333334566667788899999999999999998752 234566788888889999999888764
No 101
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.89 E-value=1.1e-19 Score=179.07 Aligned_cols=352 Identities=13% Similarity=0.055 Sum_probs=250.6
Q ss_pred ccchhhHHHHHHHHHHhhhhhhhccccCCCCchHHHHH-HHHHHHHHHHHHhcc--ccHHHHHHHHHHhhccchhhHhhh
Q 039541 117 ILSGLPSSCFFIGCLLGGLALSTLGDSSSLGRKKLLFL-SCFAMSITALATIFA--NNIWIYSTIRFVAGFFRAPIMTSV 193 (521)
Q Consensus 117 ~~~~~~~s~~~lg~~i~~~~~g~l~dr~~~Grr~~l~~-~~~~~~~~~~~~~~~--~~~~~l~~~r~l~G~~~g~~~~~~ 193 (521)
...++..++..+-.++..|+.|.++|+ -|+||.++. ...+..+++++..+. .+++...+.-++.-++.+......
T Consensus 70 s~~~~~~sis~l~~all~P~lGa~aD~--~~~Rk~~l~~~~~~~~~~~~~l~~v~~~~~~~~~~l~iia~v~~~~~~vfy 147 (477)
T PF11700_consen 70 SLWLYANSISGLLQALLAPFLGAIADY--GGRRKRFLLIFTLLGVLATALLWFVSPGQWWLALVLFIIANVGYEASNVFY 147 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcc--cccchHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHH
Confidence 556888999999999999999999999 887766654 555555666666664 345555555666667888888888
Q ss_pred hhheeeeecCcch--------------------------hHHHHHHHHHHHHHHHHHHHHHHhh--c-------CCchhH
Q 039541 194 IVLLSEMVSKRWR--------------------------GQVVIIGFTFFSFGLVSLPAVAYLS--R-------GSSWKM 238 (521)
Q Consensus 194 ~~~i~~~~~~~~r--------------------------g~~~~~~~~~~~~G~~i~~~i~~~~--~-------~~~wr~ 238 (521)
.+++.|..+++++ ++..+.-.....+|.++..++.... . ..+-|.
T Consensus 148 na~LP~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vS~~G~a~Gy~G~~v~l~i~l~~~~~~~~~~~~~~~~r~ 227 (477)
T PF11700_consen 148 NAYLPDLARPEPRVRAAREPSANGNISDSEYEAVDSLTRGRVSGLGWALGYIGGLVALLISLLLVISPGSTASNTWAIRV 227 (477)
T ss_pred HHHhHhhcCCChhhhhhhhhhccCCCChhhhhhHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccchhhhH
Confidence 9999999998888 8999888888888888776663321 1 234588
Q ss_pred HHHHHHHHHHHHHhhhceeeecchhHHHhcCCHHHHHHHHHHHhhhcCCCCCCCccccccCCCCCccccCCCcccccccH
Q 039541 239 LYVWTSIPSIVCCIIIYPFISESPRWLFIHGHEAEAMAVLKRLASRSNYQSDYGLESCCLSNMPPKAKNVIPKLDLYSSL 318 (521)
Q Consensus 239 ~f~~~~~~~~~~~~~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (521)
.+.+.++..++..+..++++||.|+....+..........+++.+ .+
T Consensus 228 ~~~~~a~ww~vfsiP~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~---------------------------------t~ 274 (477)
T PF11700_consen 228 AFLIVALWWLVFSIPLFLWLPDRPGPRPLPSGSSYLRFGFKRLWR---------------------------------TF 274 (477)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCCCCCCCCcchhHHHHHHHHHHH---------------------------------HH
Confidence 999999988888878888899887521111111222333444422 66
Q ss_pred HHHhccHHHHHHHHHHHHHHHHHHHHHHh-HHhhccCCCccH---HHHHHHHHHHhHhHHHHHHHHHhhcCCc--hHHHH
Q 039541 319 KDLFNRKWALRRLLTIMALAFGIGVVYFG-LLLGVGNLSFNI---YLSLAFNGLLDIPAYLLTFILIERWSRK--SSILT 392 (521)
Q Consensus 319 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~g~l~dr~g~~--~~~~~ 392 (521)
+++.|.|...+.++..++..-+.+..... ..+..+.++.+. ....++..+.+++|+++.+++.||+|.| +++..
T Consensus 275 k~~~~~~~~~~fLia~~l~~dg~~ti~~~~~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~l~~ 354 (477)
T PF11700_consen 275 KEIRKLRQLFLFLIAYFLYSDGVNTIISFAGIYATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFGPKTKRTLLI 354 (477)
T ss_pred HHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHH
Confidence 77777777666655555555454444333 333334566654 3444566788899999999999999998 77666
Q ss_pred HHHHHHHHHHHHHh--c----CCchHHHHHHHHHHHHHHHHHHHHHHHHhhccccCchhhhhhhHHHHHhhhhhhhHHHH
Q 039541 393 FCILSGTCSAICVA--I----GDEQEVLQIGLELASFFSACVAFNVLLVFGTELFTTCVRNSTTSLVRQAVNLGAAFSPV 466 (521)
Q Consensus 393 ~~~~~~i~~~~~~~--~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~ 466 (521)
+.++..+..+.-.+ . ...+.+..++..++.|++.+..++..-++.+|+.|++..+..+|+....+...+++||+
T Consensus 355 ~l~~~~~i~~~g~~G~~~~~~g~~~~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGPl 434 (477)
T PF11700_consen 355 SLILWIIIPLYGLFGFWPSFFGLKSPWEFWVLAVLIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKASSWLGPL 434 (477)
T ss_pred HHHHHHHHHHHHHHHhhhcccCcccHHHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHH
Confidence 66555333332222 1 11222678888889999999999999999999999999999999999999999999999
Q ss_pred HHHhh---ccchhHHHHHHHHHHHHHhHhhhccccCCCCC
Q 039541 467 LISAG---RQNEFLSFGVFGLVVFCFGFFVVFLPETIGVT 503 (521)
Q Consensus 467 ~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 503 (521)
+.+.. ..+....+....++.+++.++.+.++..|+++
T Consensus 435 l~g~i~~~tg~~r~g~~~l~~lf~~gl~ll~~v~~~~g~~ 474 (477)
T PF11700_consen 435 LFGLITDATGSQRYGFLFLLVLFLIGLILLFFVDVEKGRE 474 (477)
T ss_pred HHHHHHHHhCCchhHHHHHHHHHHHHHHHHhhccchhhhh
Confidence 99862 23466777777777777777777776555443
No 102
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.88 E-value=3.9e-20 Score=185.67 Aligned_cols=329 Identities=13% Similarity=0.068 Sum_probs=217.2
Q ss_pred CcceeeecceeeCCccccchhhHHHHHHHHHHhhhhhhhccccC--CCCc-hHHHHHHHHHHHHHHHHHhcccc------
Q 039541 101 DTTIISDWSLECAGSSILSGLPSSCFFIGCLLGGLALSTLGDSS--SLGR-KKLLFLSCFAMSITALATIFANN------ 171 (521)
Q Consensus 101 ~~~i~~~~~~~~~~~~~~~~~~~s~~~lg~~i~~~~~g~l~dr~--~~Gr-r~~l~~~~~~~~~~~~~~~~~~~------ 171 (521)
...+.+.+|++.... |.+..+..+.-++..|+.|.++||| |+|| |+.++++....+++.++....++
T Consensus 30 ~~yyt~v~Gls~~~v----g~i~~i~ri~dai~dp~~G~lsD~t~sr~Grrrp~il~g~i~~~i~~~llf~~p~~~~~~~ 105 (473)
T PRK10429 30 MYYYTDVVGLSVGLV----GTLFLVARIWDAINDPIMGWIVNNTRSRWGKFKPWILIGTLANSVVLFLLFSAHLFEGTAQ 105 (473)
T ss_pred HHHHHHhcCCCHHHH----HHHHHHHHHHHHHhhchheeehhcCCCCCCCcchhHhhhhHHHHHHHHHHHcCCCCCccHH
Confidence 344556778888554 9999999999999999999999975 5899 56667788887777666654331
Q ss_pred HHHHHHHHHHhhccchhhHhhhhhheeeee-cCcchhHHHHHHHHHHHHHHHHHHHH-HHh----h---cCCchhHHHHH
Q 039541 172 IWIYSTIRFVAGFFRAPIMTSVIVLLSEMV-SKRWRGQVVIIGFTFFSFGLVSLPAV-AYL----S---RGSSWKMLYVW 242 (521)
Q Consensus 172 ~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~-~~~~rg~~~~~~~~~~~~G~~i~~~i-~~~----~---~~~~wr~~f~~ 242 (521)
+..+++..++.+++.........+++.|+. ++++|.+..++-..+.++|..+.+.+ ..+ . +..+|+....+
T Consensus 106 ~~~~~~~~~l~~~~~t~~~ip~~al~~~lt~~~~eR~~l~~~~~~~~~ig~~~~~~~~~~~~~~~g~~~~~~g~~~~~~i 185 (473)
T PRK10429 106 YVFVCVTYILWGMTYTIMDIPFWSLVPTLTLDKREREQLVPYPRFFASLAGFVTAGFTLPFVNYVGGGDRGFGFQMFTLV 185 (473)
T ss_pred HHHHHHHHHHHHHHHHHHcchHHhhhHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHH
Confidence 335556667778888878888888999998 68999999998777777765554433 221 1 12367887777
Q ss_pred HHHHHHHHHhhhceeeecchhHHHhcCCHHHHHHHHHHHhhhcCCCCCCCccccccCCCCCccccCCCcccccccHHHHh
Q 039541 243 TSIPSIVCCIIIYPFISESPRWLFIHGHEAEAMAVLKRLASRSNYQSDYGLESCCLSNMPPKAKNVIPKLDLYSSLKDLF 322 (521)
Q Consensus 243 ~~~~~~~~~~~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 322 (521)
.+++.++..+..++..||.+.. .+.+. +++++.+.++.++.++
T Consensus 186 ~~~~~~~~~~~~~~~~~e~~~~----~~~~~---------------------------------~~~~~~~~~~~~~~~~ 228 (473)
T PRK10429 186 LIAFFIVSTIITLRNVHEVYSS----DNQVS---------------------------------AEGSHLTLKDIVALIY 228 (473)
T ss_pred HHHHHHHHHHHHHcCceecCCc----ccccc---------------------------------ccccCCCHHHHHHHHh
Confidence 7777776665666666764310 00000 0000111223566677
Q ss_pred ccHHHHHHHHHHHHHHHHHHHHHHhHHhhccCCCccHH---HHHHHHHHHhHhHHHHHHHHHhhcCCchHHHHHHHHHHH
Q 039541 323 NRKWALRRLLTIMALAFGIGVVYFGLLLGVGNLSFNIY---LSLAFNGLLDIPAYLLTFILIERWSRKSSILTFCILSGT 399 (521)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~i 399 (521)
+||.++..+...++.+..........+++.+....+.. ....+.++..+++.++.+++.||+|+|+.+.++..+..+
T Consensus 229 ~n~~~~~ll~~~~~~~~~~~~~~~~~~y~~~y~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gkk~~~~~~~~~~~~ 308 (473)
T PRK10429 229 KNDQLSCLLGMALAYNIASNIINGFAIYYFTYVIGDADLFPYYLSYAGAANLVTLILFPRLVKSLSRRILWAGASIFPVL 308 (473)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHhhheeeEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHH
Confidence 88887666555555554444333333444443322222 222334467788889999999999999998888776665
Q ss_pred HHHHHHh---cCCchHHHHHHHHHHHHHHHHHHHHHHHHhhccccC-------chhhhhhhHHHHHhhhhhhhHHHHHHH
Q 039541 400 CSAICVA---IGDEQEVLQIGLELASFFSACVAFNVLLVFGTELFT-------TCVRNSTTSLVRQAVNLGAAFSPVLIS 469 (521)
Q Consensus 400 ~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~r~~~~~~~~~~~~~g~~~~p~~~~ 469 (521)
+.+.+.. ......+...+..++.+++.+...+..+++.+|..+ .+..|...|.......+|..+++.+.|
T Consensus 309 ~~~~~~~~~~~~~~~~~~~~i~~~l~g~~~~~~~~~~~am~ad~id~~e~~tG~R~~G~~~s~~~~~~K~~~al~~~i~g 388 (473)
T PRK10429 309 SCGVLLLMGLAAPHNALLIVIAGILLNIGTALFWVLQVIMVADTVDYGEYKLGIRCESIAYSVQTMVVKGGSAFAAFFIG 388 (473)
T ss_pred HHHHHHHHhccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHhcCccchhHHHHHHHHHHHHHHHHHHHHHH
Confidence 5544432 222222455566677788888888889999999865 333456788888888899888888776
Q ss_pred h
Q 039541 470 A 470 (521)
Q Consensus 470 ~ 470 (521)
+
T Consensus 389 ~ 389 (473)
T PRK10429 389 V 389 (473)
T ss_pred H
Confidence 4
No 103
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.87 E-value=2.5e-21 Score=167.40 Aligned_cols=360 Identities=11% Similarity=0.024 Sum_probs=229.8
Q ss_pred eecCCC--CcceeeecceeeCCccccchhhHHHHHHHHHHhhhhhhhccccCCCCchHHHHHHHHHHHHHHHHHh---cc
Q 039541 95 AWDRPS--DTTIISDWSLECAGSSILSGLPSSCFFIGCLLGGLALSTLGDSSSLGRKKLLFLSCFAMSITALATI---FA 169 (521)
Q Consensus 95 ~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~s~~~lg~~i~~~~~g~l~dr~~~Grr~~l~~~~~~~~~~~~~~~---~~ 169 (521)
.||+|. ....+.|.+++.++. .++.+.|.....+-.++.|++.|| ++|.|..-++-+....+|.++.+ .+
T Consensus 59 cyd~p~alq~~fk~d~ni~~akf----tLlYsvYSwPNvVlcffgGflidr-~fgir~gtii~~~fv~~GqliFa~Ggi~ 133 (459)
T KOG4686|consen 59 CYDAPGALQIDFKLDSNIEYAKF----TLLYSVYSWPNVVLCFFGGFLIDR-RFGIRLGTIILCIFVFLGQLIFAAGGIS 133 (459)
T ss_pred ecCCchhhhhhhhcccccceeee----eeeeeeccCCCEEEeeecceeehh-hhhhhHHHHHHHHHHHHHHHHHHhchHH
Confidence 455554 455666777777555 999999999999999999999999 88988877777777777777765 45
Q ss_pred ccHHHHHHHHHHhhccchhhHhhhhhheeeeecCcchhHHHHHHHHHHHHHHHHHHHH-HHhhcC-------Cchh----
Q 039541 170 NNIWIYSTIRFVAGFFRAPIMTSVIVLLSEMVSKRWRGQVVIIGFTFFSFGLVSLPAV-AYLSRG-------SSWK---- 237 (521)
Q Consensus 170 ~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~i~~~i-~~~~~~-------~~wr---- 237 (521)
+.+|+++++||+.|+|.-...++-..|+.-|+..|+.+.++|+.....-+|..+-..+ +++.+. .+-.
T Consensus 134 ~aFw~M~~GRF~FGIGgESlAVaQN~yav~wFKGKELn~vfGlqlSvAR~GstvNf~lm~~ly~~~~~~~~~~ghT~LG~ 213 (459)
T KOG4686|consen 134 HAFWTMLAGRFLFGIGGESLAVAQNKYAVYWFKGKELNFVFGLQLSVARLGSTVNFLLMPFLYDTMGRMFPGVGHTLLGL 213 (459)
T ss_pred HHHHHHHhhheeeccCchhhhhhhcceeEEEecCccccchhhHHHHHHHhhceeeeeecHHHHHHHHHhcccchHHHHHH
Confidence 8999999999999999998888999999999999999999999988888887664333 332221 1110
Q ss_pred -HHHHH-HHHHHHHHHhhhceeeecchhHHHhcCCHHHHHHHHHHHhhhcCCCCCCCccccccCCCCCccccCCCccccc
Q 039541 238 -MLYVW-TSIPSIVCCIIIYPFISESPRWLFIHGHEAEAMAVLKRLASRSNYQSDYGLESCCLSNMPPKAKNVIPKLDLY 315 (521)
Q Consensus 238 -~~f~~-~~~~~~~~~~~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (521)
..+-. .....++.+ ... .+ ..+.+++.+.+ +++...+. .+-.
T Consensus 214 ~l~~~~~tc~~slica-l~l-------g~-----~D~rAerilh~----e~g~~Ge~--------------pkLt----- 257 (459)
T KOG4686|consen 214 WLCFEVKTCKQSLICA-LSL-------GL-----SDDRAERILHL----EEGFLGEE--------------PKLT----- 257 (459)
T ss_pred HHHHHHHHHHHHHHHH-HHh-------hh-----hhhHHHHHHhh----hcCcccCC--------------cccc-----
Confidence 00000 001111111 000 00 11222222222 11110000 0000
Q ss_pred ccHHHHhccHHHHHHHHHHHHHHHHHHHHHHh-HHhhccCCCccHHHHHHH---HHHHhHhHHHHHHHHHhhcCCchHHH
Q 039541 316 SSLKDLFNRKWALRRLLTIMALAFGIGVVYFG-LLLGVGNLSFNIYLSLAF---NGLLDIPAYLLTFILIERWSRKSSIL 391 (521)
Q Consensus 316 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~g~l~dr~g~~~~~~ 391 (521)
+. .-+ .|.+|...++...++....-.+.. ..++.+.+|.++.....+ .-....+.+++.|.++||+|++...+
T Consensus 258 -dv-~~f-~ppfw~~~iicv~yyva~fPFi~lg~~fF~~rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~G~n~~wv 334 (459)
T KOG4686|consen 258 -DV-NTF-YPPFWVLVIICVLYYVAWFPFITLGPMFFQKRFGLSAVSAGNILSTVYGISAVLSPVFGAISDKYGFNLWWV 334 (459)
T ss_pred -cc-ccc-CccHHHHHHHHHHHHHHHHHHhhhhHHHHHHhhCCChhhccchhhhhhhhhhhhhhhHHHhHhhhcceehhH
Confidence 00 012 234555555554444443322222 233445567665443322 22445567788999999999998877
Q ss_pred HHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHHHHHhhccccCchhhhhhhHHHHHhhhhhhhHHHHHHHhh
Q 039541 392 TFCILSGTCSAICVAIGDEQEVLQIGLELASFFSACVAFNVLLVFGTELFTTCVRNSTTSLVRQAVNLGAAFSPVLISAG 471 (521)
Q Consensus 392 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~~ 471 (521)
.+..+..+..=...+... +..++.+.+.|..........|..++.+.|+++-|++.|++....++|-.+.|++.|..
T Consensus 335 ~~a~~~tl~~H~~l~Ft~---lsPy~~m~~lGLsysllAcslWP~va~~vpE~qLGTaygf~qsIqNLgla~i~Iiag~i 411 (459)
T KOG4686|consen 335 ASACILTLLGHSGLFFTF---LSPYTSMTFLGLSYSLLACSLWPCVASLVPEEQLGTAYGFIQSIQNLGLAFIPIIAGFI 411 (459)
T ss_pred HHHHHHHHHHhhhHHhhh---ccHHHHHHHHhhhHHHHHHHHhhhhhhhCCHHHhcchHHHHHHHHhhhhhHHhhhhhee
Confidence 766655554433333222 34567788889888888888999999999999999999999999999999999999862
Q ss_pred c------cchhHHHHHHHHHHHHHhHhhhccccCCC
Q 039541 472 R------QNEFLSFGVFGLVVFCFGFFVVFLPETIG 501 (521)
Q Consensus 472 ~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 501 (521)
. .+....|++++..++....+.+++.++.+
T Consensus 412 ~d~~g~y~~le~ffl~~~~~aL~svgil~~~N~kq~ 447 (459)
T KOG4686|consen 412 ADGDGSYDNLEAFFLIIGLMALTSVGILFYLNKKQS 447 (459)
T ss_pred ecCCCchhhHHHHHHHHHHHHHHHHHHHhheecccc
Confidence 1 12334566666666666666666544333
No 104
>PRK09848 glucuronide transporter; Provisional
Probab=99.87 E-value=1.2e-19 Score=181.27 Aligned_cols=323 Identities=12% Similarity=0.037 Sum_probs=208.6
Q ss_pred CcceeeecceeeCCccccchhhHHHHHHHHHHhhhhhhhccccC--CCCchHHH-HHHHHHHHHHHHHHh-c----ccc-
Q 039541 101 DTTIISDWSLECAGSSILSGLPSSCFFIGCLLGGLALSTLGDSS--SLGRKKLL-FLSCFAMSITALATI-F----ANN- 171 (521)
Q Consensus 101 ~~~i~~~~~~~~~~~~~~~~~~~s~~~lg~~i~~~~~g~l~dr~--~~Grr~~l-~~~~~~~~~~~~~~~-~----~~~- 171 (521)
.+.+.+.+|++..+. |.+.+...+..++..++.|+++||+ |+|||+.+ +++.+...+..++.. . +++
T Consensus 32 ~~y~~~~~gl~~~~~----g~~~~~~~~~~~~~~~~~G~l~Dr~~~~~Gr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 107 (448)
T PRK09848 32 LSYYTDVAGVGAAAA----GTMLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPFLLFGTAPLMIFSVLVFWVPTDWSHSS 107 (448)
T ss_pred HHHHHHHcCCCHHHH----HHHHHHHHHHHHHhhhhheeeeecCCCCCcCchHHHHHHHHHHHHHHHHHHhCcCCCCcch
Confidence 345667788888555 9999999999999999999999994 45887755 555554554444432 1 112
Q ss_pred -HHHHHHHHHHhhccchhhHhhhhhheeeeec-CcchhHHHHHHHHHH-----HHHHHHHHHHHHhhc-C--CchhHHHH
Q 039541 172 -IWIYSTIRFVAGFFRAPIMTSVIVLLSEMVS-KRWRGQVVIIGFTFF-----SFGLVSLPAVAYLSR-G--SSWKMLYV 241 (521)
Q Consensus 172 -~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~-~~~rg~~~~~~~~~~-----~~G~~i~~~i~~~~~-~--~~wr~~f~ 241 (521)
.+.+++..++.+++.+...+...++..+... +++|.+..++-..+. .+|..++|.++.... . .+|.....
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~~~p~i~~~~g~~~~~~~~~~~~ 187 (448)
T PRK09848 108 KVVYAYLTYMGLGLCYSLVNIPYGSLATAMTQQPQSRARLGAARGIAASLTFVCLAFLIGPSIKNSSPEEMVSVYHFWTI 187 (448)
T ss_pred HHHHHHHHHHHHHHHHHHhcccHhhhhhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHH
Confidence 2334455667788887777777777777664 467888776655443 345556666644322 1 12222223
Q ss_pred HHHHHHHHHHhhhceeeecchhHHHhcCCHHHHHHHHHHHhhhcCCCCCCCccccccCCCCCccccCCCcccccccHHHH
Q 039541 242 WTSIPSIVCCIIIYPFISESPRWLFIHGHEAEAMAVLKRLASRSNYQSDYGLESCCLSNMPPKAKNVIPKLDLYSSLKDL 321 (521)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 321 (521)
+.+++.++..++.+...||+++. +. ++......++.+
T Consensus 188 ~~~v~~~~~~~~~~~~~~e~~~~-----~~--------------------------------------~~~~~~~~~~~l 224 (448)
T PRK09848 188 VLAIAGMVLYFICFKSTRENVVR-----IV--------------------------------------AQPSLKISLQTL 224 (448)
T ss_pred HHHHHHHHHHHHHHcCcEeccCC-----Cc--------------------------------------cCCCHHHHHHHH
Confidence 33444444443444455654310 00 000111257789
Q ss_pred hccHHHHHHHHHHHHHHHHHHHHHHhHHhhccC-CCccHHHHHH--H-HHHHhHhHHHHHHHHHhhcCCchHHHHHHHHH
Q 039541 322 FNRKWALRRLLTIMALAFGIGVVYFGLLLGVGN-LSFNIYLSLA--F-NGLLDIPAYLLTFILIERWSRKSSILTFCILS 397 (521)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~--~-~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~ 397 (521)
+++|.++...+..++............+++.++ .+.+...... . ..+..+++.++.+++.||+|+|+.+.++..+.
T Consensus 225 ~~n~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~~~~~~g~~~~ 304 (448)
T PRK09848 225 KRNRPLFMLCIGALCVLISTFAVSASSLFYVRYVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARIGKKNTFLIGALLG 304 (448)
T ss_pred hCCchHHHHHHHHHHHHHHHHHHhhhheeeEeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHH
Confidence 999988776666666665555544455665554 3433322221 1 23456678889999999999999999998888
Q ss_pred HHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHHHHHhhccccCch-------hhhhhhHHHHHhhhhhhhHHHHHHHh
Q 039541 398 GTCSAICVAIGDEQEVLQIGLELASFFSACVAFNVLLVFGTELFTTC-------VRNSTTSLVRQAVNLGAAFSPVLISA 470 (521)
Q Consensus 398 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~r~~~~~~~~~~~~~g~~~~p~~~~~ 470 (521)
.++.+.+.+.+..+.+...+..++.+++.+...+...++.+|..|.+ .+|...|+.+....+|..+++.+.+.
T Consensus 305 ~i~~~~~~~~~~~~~~~~~~~~~l~g~G~~~~~~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~~klg~aig~~i~g~ 384 (448)
T PRK09848 305 TCGYLLFFWVSVWSLPVALVALAIASIGQGVTMTVMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKCGQAIGGSIPAF 384 (448)
T ss_pred HHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHhhCccchhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88777666544333345555667788888888889999998888754 35888999999999999988887753
No 105
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=99.87 E-value=2.7e-20 Score=185.50 Aligned_cols=338 Identities=14% Similarity=0.018 Sum_probs=222.1
Q ss_pred CcceeeecceeeCCccccchhhHHHHHHHHHHhhhhhhhccccCCCC-----chHHHHHHHHHHH-HHHHHHhccccHHH
Q 039541 101 DTTIISDWSLECAGSSILSGLPSSCFFIGCLLGGLALSTLGDSSSLG-----RKKLLFLSCFAMS-ITALATIFANNIWI 174 (521)
Q Consensus 101 ~~~i~~~~~~~~~~~~~~~~~~~s~~~lg~~i~~~~~g~l~dr~~~G-----rr~~l~~~~~~~~-~~~~~~~~~~~~~~ 174 (521)
.|.+.+++|++.++. +...+...+...+-.+ +|+++|| ++ ||+.++++.++.+ ++....+..++...
T Consensus 49 ~~~l~~~lg~s~~~i----~~~~sl~~lpw~~K~l-~g~l~D~--~~i~G~rRr~~l~~~~~l~~~~~~~~l~~~~~~~~ 121 (468)
T TIGR00788 49 SPMLTDDLGLDGARY----QRLVGLSSLGWALKPF-AGVMSDT--FPLFGYTKRWYLVLSGLLGSAILYGLLPGKVSSAK 121 (468)
T ss_pred hHHHHHhcCCCHHHH----HHHHHHHHHHHHHHHH-HHHHHHh--cCCCCccchHHHHHHHHHHHHHHHHhcccccchHH
Confidence 677778899999776 9999999999999766 9999999 97 7787788777763 44444444455444
Q ss_pred HH-HHHHHhhccchhhHhhhhhheeeeecCcchhHHHH---HHHHHHHHHHHHHHHH-HHhhcCCchhHHHHHHHHHHHH
Q 039541 175 YS-TIRFVAGFFRAPIMTSVIVLLSEMVSKRWRGQVVI---IGFTFFSFGLVSLPAV-AYLSRGSSWKMLYVWTSIPSIV 249 (521)
Q Consensus 175 l~-~~r~l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~---~~~~~~~~G~~i~~~i-~~~~~~~~wr~~f~~~~~~~~~ 249 (521)
.. +.+++.+++.+...++.-+++.|..+ +++....+ +......+|.++++.+ |.+.+..+||..|++.+.+.++
T Consensus 122 ~~~~~~~l~~~~~a~~dv~~da~~~e~~~-~~~~~~~~~~s~~~~~~~~G~~vg~~l~G~l~~~~~~~~~f~~~a~l~ll 200 (468)
T TIGR00788 122 VAAAFIFLAALAKALYDVLVDSLYSERIR-ESPSAGPSLVSWMWGASATGGLISSLLGGPLLDKTLTRILFLITAALLLL 200 (468)
T ss_pred HHHHHHHHHHHHHHHHHHhHHHHHhhhhh-cCCCcCCCeeeHHHHHHHHHHHHHHHHHHHHHHhcCcchHHHHHHHHHHH
Confidence 44 48899999999999999999999998 55544333 3333445899999888 6777778999999998888877
Q ss_pred HHhhhceeeecchhHHHhcCCHHHHHHHHHHHhhhcCCCCCCCccccccCCCCCccccCCCcccccccHHHHhccHHHHH
Q 039541 250 CCIIIYPFISESPRWLFIHGHEAEAMAVLKRLASRSNYQSDYGLESCCLSNMPPKAKNVIPKLDLYSSLKDLFNRKWALR 329 (521)
Q Consensus 250 ~~~~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 329 (521)
.. +..++++|++.....+.+.++.... ... .........+.....+..+++|..++
T Consensus 201 ~~-~~~~~~~E~~~~~~~~~~~~~~~~~-~~~----------------------~~~~~~~~~~~~~~l~~~l~~~~i~~ 256 (468)
T TIGR00788 201 QL-FVSNLSKERRAFVRPRIGTYLEMNM-ALL----------------------TLGVLANVKVQILGLRGAIQLLEIAK 256 (468)
T ss_pred HH-HHHHhcccccccccccccccchhhh-hhh----------------------hhhHHHHHHHHHHHHHHHHhcHHHHH
Confidence 75 5567778853100000000000000 000 00000000000124555677787666
Q ss_pred HHHHHHH-HHHHHHHHHHhHHhhccCCCccHH---HHHHHHHHHhHhHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHH
Q 039541 330 RLLTIMA-LAFGIGVVYFGLLLGVGNLSFNIY---LSLAFNGLLDIPAYLLTFILIERWSRKSSILTFCILSGTCSAICV 405 (521)
Q Consensus 330 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~i~~~~~~ 405 (521)
.++..++ .........+..-+.....|.++. ......+++.+++..+.+++.+|++.|+++.++.++.+++.+...
T Consensus 257 ~l~fifl~~~~~~~~~~~~f~~~~~~lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~~~r~~l~~~~~l~~~~~~~~~ 336 (468)
T TIGR00788 257 PLIFIFLSYANLPGASGSVFCATTQCLPGGPSFSGMSKVVGNLGSLCGVGGYDRFLKTFPYRLLFGVTTLLYTLSSLFDL 336 (468)
T ss_pred HHHHHHHHHhhcCCCCceeEEEEcccCCCCcchhhhHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhCce
Confidence 5554444 211111110000011123454443 334456678888889999999999999999999888888765532
Q ss_pred hcC-C-------chHHHHHHHHHHHHHHHHHHHHHHHHhhccccCchhhhhhhHHHHHhhhhhhhHHHHHHHh
Q 039541 406 AIG-D-------EQEVLQIGLELASFFSACVAFNVLLVFGTELFTTCVRNSTTSLVRQAVNLGAAFSPVLISA 470 (521)
Q Consensus 406 ~~~-~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~ 470 (521)
... . ...+......++.+++.+..+.....++.+..|++.+|+..++.+.+.++|..+++.+.+.
T Consensus 337 ~l~~~~~~~~gi~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~egt~~al~~s~~~lg~~v~~~~gg~ 409 (468)
T TIGR00788 337 ILVKRWNLAFGISDEVFVLGDSIIAEVLAQLKFMPFLVLLARLCPSGCESSVFALLASILHLGSSVSGFLGVL 409 (468)
T ss_pred eeeeccccccCCCCeeeeeehhHHHHHHHHHHHccHHHHHHHhCCCCceehHHHHHHHHHHHHHHHHHHHHHH
Confidence 111 0 1112444556677788888888889999999999999999999999999999999987764
No 106
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.87 E-value=2e-19 Score=174.04 Aligned_cols=321 Identities=14% Similarity=0.138 Sum_probs=229.1
Q ss_pred CcceeeecceeeCCccccchhhHHHHHHHHHHhhhhhhhccccCCCC-chHHHHHHHHHHHHHHHHHhccccHHHHHHHH
Q 039541 101 DTTIISDWSLECAGSSILSGLPSSCFFIGCLLGGLALSTLGDSSSLG-RKKLLFLSCFAMSITALATIFANNIWIYSTIR 179 (521)
Q Consensus 101 ~~~i~~~~~~~~~~~~~~~~~~~s~~~lg~~i~~~~~g~l~dr~~~G-rr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r 179 (521)
++..-++.|.+.+|. |.+.+...+...++++++|.++|| ++ +|+++.+..++.++..+.....++++.+++..
T Consensus 25 ~~~~L~~~G~s~~qI----G~l~a~~~~~~i~~~~~~g~~aDr--~~~~~~~l~~~~l~~~~~~~~~~~~~~f~~~~~~~ 98 (400)
T PF03825_consen 25 LPLYLESRGFSGTQI----GILLAVGPLARIVSPPFWGAIADR--FGSAKRILALLSLLSALALLLLAFSSSFWWLFVIM 98 (400)
T ss_pred HHHHHHhCCCCHHHH----HHHHHHHHHHHHHHHHHHHHHHhH--hhhHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHH
Confidence 455567788988666 999999999999999999999999 86 57788788888888777788889999888888
Q ss_pred HHhhccchhhHhhhhhheeeeecCcchhHHHHHHHHHHHHHHHHHHHH--HHhhcC---CchhHHHHHHHHHHHHHHhhh
Q 039541 180 FVAGFFRAPIMTSVIVLLSEMVSKRWRGQVVIIGFTFFSFGLVSLPAV--AYLSRG---SSWKMLYVWTSIPSIVCCIII 254 (521)
Q Consensus 180 ~l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~i~~~i--~~~~~~---~~wr~~f~~~~~~~~~~~~~~ 254 (521)
++..+......|...++..+... ++++-.|-.-...++|.+++... +.+... .+....+++.+...++.. ..
T Consensus 99 ~l~~~~~~p~~pl~dsi~~~~~~--~~~~~YG~iRlwGSiGf~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ll~-~~ 175 (400)
T PF03825_consen 99 LLFSFFFSPTMPLSDSIALSYLG--DRGKDYGRIRLWGSIGFIVAALAFGGLLGGYLGISGTSLIFYIAAILSLLLA-GF 175 (400)
T ss_pred HHHHHHHccHHHHHHHHHHHHcc--cccCCCCcchhhhhHHHHHHHHHHHHHHHhhhccccccHHHHHHHHHHHHHH-HH
Confidence 88888877788888887777764 23333444455566666555332 222221 223345666665555554 44
Q ss_pred ceeeecchhHHHhcCCHHHHHHHHHHHhhhcCCCCCCCccccccCCCCCccccCCCcccccccHHHHhccHHHHHHHHHH
Q 039541 255 YPFISESPRWLFIHGHEAEAMAVLKRLASRSNYQSDYGLESCCLSNMPPKAKNVIPKLDLYSSLKDLFNRKWALRRLLTI 334 (521)
Q Consensus 255 ~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 334 (521)
.+.+|+.|.. ++.++ ..++....+..+++|+|++...++..
T Consensus 176 ~l~lp~~~~~----~~~~~-----------------------------------~~~~~~~~~~~~llk~~~~~~Fll~~ 216 (400)
T PF03825_consen 176 ALFLPKTPPK----RSAKE-----------------------------------SVKKLLGLDALKLLKNPRFLVFLLAA 216 (400)
T ss_pred HHhCCCCccc----cccCC-----------------------------------CcccccchHHHHHhcCccHHHHHHHH
Confidence 4556776521 00000 00000012446799999988777777
Q ss_pred HHHHHHHHHHHHhHHhhccCCC-ccHHH---HHHHHHHHhHhHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHhcCCc
Q 039541 335 MALAFGIGVVYFGLLLGVGNLS-FNIYL---SLAFNGLLDIPAYLLTFILIERWSRKSSILTFCILSGTCSAICVAIGDE 410 (521)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~---~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~i~~~~~~~~~~~ 410 (521)
++........+...+.++++.+ .+... ...+..+.+++.-...+++.+|+|.++++.++.+..++=..++....++
T Consensus 217 ~l~~~~~~~~~~f~~~yl~~~gg~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~g~~~ll~~a~~~~~vR~~l~a~~~~~ 296 (400)
T PF03825_consen 217 FLIGISHAAYYTFFSIYLQELGGYSGSTIGILWALGVVAEIPFFFFSGRFLKRFGIKWLLLLALVAYAVRWLLYAYFSDP 296 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 7777777777777777788877 33222 2244557788888999999999999999999999999998888876333
Q ss_pred hHHHHHH----HHHHHHHHHHHHHHHHHHhhccccCchhhhhhhHHHHHh-hhhhhhHHHHHHHh
Q 039541 411 QEVLQIG----LELASFFSACVAFNVLLVFGTELFTTCVRNSTTSLVRQA-VNLGAAFSPVLISA 470 (521)
Q Consensus 411 ~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~-~~~g~~~~p~~~~~ 470 (521)
. +...+ ...+-|+.++..+.....++.+..|++.|+++.++.+.. ..+|..+|.++.|+
T Consensus 297 ~-~~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~~iG~~igG~ 360 (400)
T PF03825_consen 297 W-PFIVALQLLGQLLHGLTFGLFHAASVRYIDRIAPPELRATAQGLYSALSFGLGGAIGSLIGGW 360 (400)
T ss_pred c-HHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCccchHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 2 22222 234578888889999999999999999999999998876 47888999988886
No 107
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=99.86 E-value=1.6e-19 Score=172.48 Aligned_cols=328 Identities=14% Similarity=0.064 Sum_probs=240.8
Q ss_pred CcceeeecceeeCCccccchhhHHHHHHHHHHhhhhhhhccccC--CCCch-HHHHHHHHHHHHHHHHHhcccc------
Q 039541 101 DTTIISDWSLECAGSSILSGLPSSCFFIGCLLGGLALSTLGDSS--SLGRK-KLLFLSCFAMSITALATIFANN------ 171 (521)
Q Consensus 101 ~~~i~~~~~~~~~~~~~~~~~~~s~~~lg~~i~~~~~g~l~dr~--~~Grr-~~l~~~~~~~~~~~~~~~~~~~------ 171 (521)
+-...+.+|++.... |.+..+.-+--++..|+.|.++||| |+||+ |.++.+.+..++.+.++-.+++
T Consensus 36 l~fYTdv~Gis~~~a----G~iflv~RiiDAi~DP~~G~i~D~t~~r~GrfRP~lL~g~ip~~i~~~l~F~~p~~~~~~k 111 (467)
T COG2211 36 LFFYTDVFGLSAALA----GTIFLVARIIDAITDPIMGFIVDRTRSRWGRFRPWLLWGAIPFAIVAVLLFITPDFSMTGK 111 (467)
T ss_pred HHHHhcccCCcHHHH----HHHHHHHHHHHHHhcchheeeecccccccccccHHHHHHhHHHHHHHHHHHcCCCcccCcc
Confidence 344567889998554 8888888888889999999999997 89985 5567788999999999888773
Q ss_pred HHHHHHHHHHhhccchhhHhhhhhheeeee-cCcchhHHHHHHHHHHHHHHHHHH-----HHHHhhc---CCchhHHHHH
Q 039541 172 IWIYSTIRFVAGFFRAPIMTSVIVLLSEMV-SKRWRGQVVIIGFTFFSFGLVSLP-----AVAYLSR---GSSWKMLYVW 242 (521)
Q Consensus 172 ~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~-~~~~rg~~~~~~~~~~~~G~~i~~-----~i~~~~~---~~~wr~~f~~ 242 (521)
....++...+.+++.......-.++..|+. ++++|.+..++-+.+.++|.++.. ++..+.+ ..||+..-++
T Consensus 112 ~~ya~vtY~l~~l~YT~vniPy~al~~~iT~d~~ER~~l~s~R~~~~~~g~~l~~~~~~plv~~~g~~~~~~g~~~~~~~ 191 (467)
T COG2211 112 LIYALVTYMLLGLGYTLVNIPYGALGPEITQDPQERASLTSWRMVFASLGGLLVAVLFPPLVKLFGGGDKALGYQGTALV 191 (467)
T ss_pred hHHHHHHHHHHHHHHHheeCchhhcchhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcchhhHHHHHHH
Confidence 455667788888988888888889999998 568999999999999998866543 3334333 4589999999
Q ss_pred HHHHHHHHHhhhceeeecchhHHHhcCCHHHHHHHHHHHhhhcCCCCCCCccccccCCCCCccccCCCcccccccHHHHh
Q 039541 243 TSIPSIVCCIIIYPFISESPRWLFIHGHEAEAMAVLKRLASRSNYQSDYGLESCCLSNMPPKAKNVIPKLDLYSSLKDLF 322 (521)
Q Consensus 243 ~~~~~~~~~~~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 322 (521)
.+++..+..+++++..+|.+.. .+.. +...+.+.+..+..++
T Consensus 192 ~~vi~~i~~l~~~~~v~ER~~~--------------------~~~~------------------~~~~~~~~~~~~~~~~ 233 (467)
T COG2211 192 LGVIGVILLLFCFFNVKERVVE--------------------TQPT------------------KTGVKLKLKDSFLLIF 233 (467)
T ss_pred HHHHHHHHHHHHHHHhhcccCc--------------------cccC------------------cccccccHHHHHHHHH
Confidence 9988888887777777775420 0000 0001111122455788
Q ss_pred ccHHHHHHHHHHHHHHHHHHHH----HHhHHhhccCCCccHHHHHHHHHHHhHhHHHHHHHHHhhcCCchHHHHHHHHHH
Q 039541 323 NRKWALRRLLTIMALAFGIGVV----YFGLLLGVGNLSFNIYLSLAFNGLLDIPAYLLTFILIERWSRKSSILTFCILSG 398 (521)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~ 398 (521)
+|+.++..++..++.+.+.+.. .|+..+.+.+................+++.++..++.+|+|+|++..++.++..
T Consensus 234 ~Nrp~~~~l~~~l~~~~~~~i~~s~~~yy~~y~lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~gkk~~~~~~~~~~~ 313 (467)
T COG2211 234 KNRPLLLLLLMNLLLFIAFNIRGSIMVYYVTYVLGDPELFAYLLLLASGAGLLIGLILWPRLVKKFGKKKLFLIGLLLLA 313 (467)
T ss_pred ccchHHHHHHHHHHHHHHHHHHhhhhheeEEEEcCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHH
Confidence 9998777666555555444333 334444444434444455555666677778999999999999999999999999
Q ss_pred HHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHHHHHhhccccCc-------hhhhhhhHHHHHhhhhhhhHHHHHHHh
Q 039541 399 TCSAICVAIGDEQEVLQIGLELASFFSACVAFNVLLVFGTELFTT-------CVRNSTTSLVRQAVNLGAAFSPVLISA 470 (521)
Q Consensus 399 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~r~~~~~~~~~~~~~g~~~~p~~~~~ 470 (521)
++.+.+.+.+....+..++..++.+++.+...++.+++++|..+- +.-|...|.+.++..+|.+++..+.|+
T Consensus 314 i~~~~~~f~~~~~~~l~~~~~~i~~~g~~~~~~l~wam~~d~vDyge~~TG~R~eGi~~s~~tF~~K~g~ala~~~~g~ 392 (467)
T COG2211 314 VGYLLLYFTPAGSVVLIVVALIIAGVGTGIANPLPWAMVADTVDYGEWKTGVRREGIVYSGMTFFRKLGLALAGFIPGW 392 (467)
T ss_pred HHHHHHHhhcCcchHHHHHHHHHHHHHhhccccccHHHhcchhhHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999988855446667777888999999999999999998642 334777888888888888877766653
No 108
>PRK11462 putative transporter; Provisional
Probab=99.85 E-value=1.7e-18 Score=172.60 Aligned_cols=320 Identities=9% Similarity=0.005 Sum_probs=204.5
Q ss_pred cceeeecceeeCCccccchhhHHHHHHHHHHhhhhhhhccccC--CCCchHH-HHHHHHHHHHHHHHHhcccc------H
Q 039541 102 TTIISDWSLECAGSSILSGLPSSCFFIGCLLGGLALSTLGDSS--SLGRKKL-LFLSCFAMSITALATIFANN------I 172 (521)
Q Consensus 102 ~~i~~~~~~~~~~~~~~~~~~~s~~~lg~~i~~~~~g~l~dr~--~~Grr~~-l~~~~~~~~~~~~~~~~~~~------~ 172 (521)
..+.+.+|++.... |.+..+.-+--++..|+.|.++||| |+||||. ++++....+++.+++...++ .
T Consensus 34 ~fyt~~~Gl~~~~~----g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~i~~~llf~~p~~s~~~~~ 109 (460)
T PRK11462 34 FFYTDIFGIPAGFV----GTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCVLAYSTPDLSMNGKM 109 (460)
T ss_pred HHHHHhhCCCHHHH----HHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHHHHHHHHHHHHhCCCCCcchHH
Confidence 34456778888444 8888888889999999999999997 7898655 45677788887777655542 3
Q ss_pred HHHHHHHHHhhccchhhHhhhhhheeeeec-CcchhHHHHHHHHHHHHHHHHHHHHH-Hhhc-------CCchhHHHHHH
Q 039541 173 WIYSTIRFVAGFFRAPIMTSVIVLLSEMVS-KRWRGQVVIIGFTFFSFGLVSLPAVA-YLSR-------GSSWKMLYVWT 243 (521)
Q Consensus 173 ~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~-~~~rg~~~~~~~~~~~~G~~i~~~i~-~~~~-------~~~wr~~f~~~ 243 (521)
..+++..++..++.......-.++..|+.+ +++|++..++...+..+|..+++.+. .+.. ..+|+....+.
T Consensus 110 ~y~~~~~~~~~~~~t~~~ipy~al~~~lt~d~~eRt~l~s~r~~~~~iG~~~~~~~~~plv~~~g~~~~~~g~~~~~~i~ 189 (460)
T PRK11462 110 IYAAITYTLLTLLYTVVNIPYCALGGVITNDPTQRISLQSWRFVLATAGGMLSTVLMMPLVNLIGGDNKPLGFQGGIAVL 189 (460)
T ss_pred HHHHHHHHHHHHHHHHHhccHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHH
Confidence 445666677788888888888888999886 78999999999999998887776552 2211 13688887777
Q ss_pred HHHHHHHHhhhceeeecchhHHHhcCCHHHHHHHHHHHhhhcCCCCCCCccccccCCCCCccccCCCcccccccHHHHhc
Q 039541 244 SIPSIVCCIIIYPFISESPRWLFIHGHEAEAMAVLKRLASRSNYQSDYGLESCCLSNMPPKAKNVIPKLDLYSSLKDLFN 323 (521)
Q Consensus 244 ~~~~~~~~~~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 323 (521)
+++.++..++++...+|.++. +.+ +.+.++.++.+++
T Consensus 190 ~ii~~i~~~i~~~~~kE~~~~-----~~~--------------------------------------~~~~~~~l~~~~~ 226 (460)
T PRK11462 190 SVVAFMMLAFCFFTTKERVEA-----PPT--------------------------------------TTSMREDLRDIWQ 226 (460)
T ss_pred HHHHHHHHHHHHhcceeccCC-----Ccc--------------------------------------CCCHHHHHHHHhC
Confidence 777776665555555654210 000 0001235677888
Q ss_pred cHHHHHHHHHHHHHHHHH----HHHHHhHHhhccCCCccHHHHHHHHHHHhHhHHHHHHHHHhhcCCchHHHHHHHHHHH
Q 039541 324 RKWALRRLLTIMALAFGI----GVVYFGLLLGVGNLSFNIYLSLAFNGLLDIPAYLLTFILIERWSRKSSILTFCILSGT 399 (521)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~i 399 (521)
|+.++......++..... ....|...+...+.. ..........+..+++.++++++.||+++|+....+..+..+
T Consensus 227 Nk~~~~l~~~~~~~~~~~~~~~~~~~y~~~y~~g~~~-~~~~~l~~~~i~~iig~~l~~~l~~r~gkk~~~~~~~~~~~~ 305 (460)
T PRK11462 227 NDQWRIVGLLTIFNILAVCVRGGAMMYYVTWILGTPE-VFVAFLTTYCVGNLIGSALAKPLTDWKCKVTIFWWTNALLAV 305 (460)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHhHhhhhhhhhcCChH-HHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHH
Confidence 888665544433333322 222333344332211 112233455577788899999999999999887655554444
Q ss_pred HHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHHHHHhhccccC-------chhhhhhhHHHHHhhhhhhhHHHHHHH
Q 039541 400 CSAICVAIGDEQEVLQIGLELASFFSACVAFNVLLVFGTELFT-------TCVRNSTTSLVRQAVNLGAAFSPVLIS 469 (521)
Q Consensus 400 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~r~~~~~~~~~~~~~g~~~~p~~~~ 469 (521)
..+++.+.+....+...+..++.+++.+...+..+.+.+|..+ .+..|...+.......+|..+++.+.|
T Consensus 306 ~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~l~~~m~ad~~d~~e~~tG~r~~g~~~a~~~f~~Klg~alg~~i~g 382 (460)
T PRK11462 306 ISLAMFFVPMQASITMFVFIFVIGVLHQLVTPIQWVMMSDTVDYGEWCNGKRLTGISFAGTLFVLKLGLAFGGALIG 382 (460)
T ss_pred HHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHhcCCCchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333434333322233444555666666666677778887765 222344456666777788777776655
No 109
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.83 E-value=3.6e-18 Score=167.82 Aligned_cols=371 Identities=10% Similarity=-0.009 Sum_probs=216.2
Q ss_pred ceeeecceeeCCccccchhhHHHHHHHHHHhhhhhhhccccCCC-CchHHHHHHHHHHHHHHHHHhccc-cHHHHHHHHH
Q 039541 103 TIISDWSLECAGSSILSGLPSSCFFIGCLLGGLALSTLGDSSSL-GRKKLLFLSCFAMSITALATIFAN-NIWIYSTIRF 180 (521)
Q Consensus 103 ~i~~~~~~~~~~~~~~~~~~~s~~~lg~~i~~~~~g~l~dr~~~-Grr~~l~~~~~~~~~~~~~~~~~~-~~~~l~~~r~ 180 (521)
.+.+++|++.++. +.+.+.+.....++.+++|+++|| + ||||+++++.++.+++.++.+..+ +...++++..
T Consensus 35 yL~~~lgls~~~a----~~i~~~~~~~~~l~~ligG~LaDR--ilGrrr~iliG~il~~lg~lll~~~~~~~~~~~l~l~ 108 (493)
T PRK15462 35 YLTNQLKYDDNHA----YELFSAYCSLVYVTPILGGFLADK--VLGNRMAVMLGALLMAIGHVVLGASEIHPSFLYLSLA 108 (493)
T ss_pred HHHHhcCCCHHHH----HHHHHHHHHHHHHHHHHHHHHHHH--ccCcHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHH
Confidence 3456789998776 999999999999999999999999 9 999999999999999988776543 2233444444
Q ss_pred HhhccchhhHhhhhhheeeeecCc--chhHHHHHHHHHHHHHHHHHHHH-HHhhcCCchhHHHHHHHHHHHHHHhhhcee
Q 039541 181 VAGFFRAPIMTSVIVLLSEMVSKR--WRGQVVIIGFTFFSFGLVSLPAV-AYLSRGSSWKMLYVWTSIPSIVCCIIIYPF 257 (521)
Q Consensus 181 l~G~~~g~~~~~~~~~i~~~~~~~--~rg~~~~~~~~~~~~G~~i~~~i-~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~ 257 (521)
+.++|.|...+...++++|.+|++ +|..++++...+.++|..++|.+ +++.+..|||+.|.+.++..++.. +.+..
T Consensus 109 li~iG~G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~L~~~~Gw~~~F~iaaigm~l~l-i~~~~ 187 (493)
T PRK15462 109 IIVCGYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGYAQEEYSWAMGFGLAAVGMIAGL-VIFLC 187 (493)
T ss_pred HHHHhcccccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHHHHHhhhChHHHHHHHHHHHHHHH-HHHHH
Confidence 555666666777788999999875 79999999999999999999999 777778899999998766444443 22222
Q ss_pred eecchhHH-H-hcCCHHHHHHHH------------H-HHhhhcCCCCCCCccccccCC-CC----CccccCCCccccccc
Q 039541 258 ISESPRWL-F-IHGHEAEAMAVL------------K-RLASRSNYQSDYGLESCCLSN-MP----PKAKNVIPKLDLYSS 317 (521)
Q Consensus 258 ~~esp~~~-~-~~~~~~~~~~~~------------~-~~~~~~~~~~~~~~~~~~~~~-~~----~~~~~~~~~~~~~~~ 317 (521)
.++..... . .++..++.+... . .+....-.. +.......... .. ..-...+. +
T Consensus 188 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~------~ 260 (493)
T PRK15462 188 GNRHFTHTRGVNKKVLRATNFLLPNWGWLLVLLVATPALITVLFWK-EWSVYALIVATIIGLGVLAKIYRKAE------N 260 (493)
T ss_pred hhhhhccCCCCCCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhcC------C
Confidence 11110000 0 000000000000 0 000000000 00000000000 00 00000000 0
Q ss_pred HHHHhccHH--HHHHHHHHHHHHHHHHHHHHhHHhhccC------CC--ccHHHHHHHHHHHhHhHHHHHHHHHhhcCC-
Q 039541 318 LKDLFNRKW--ALRRLLTIMALAFGIGVVYFGLLLGVGN------LS--FNIYLSLAFNGLLDIPAYLLTFILIERWSR- 386 (521)
Q Consensus 318 ~~~l~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~--~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~- 386 (521)
+.-|+|- +...++....+|....-....+..+.++ .| .++.....+..+..++.+++.+++-.|..|
T Consensus 261 --~~er~r~~~~~~l~~~~~~Fw~~~~Q~~~sl~lfa~~~vd~~~~g~~ip~~~~qslNp~~ii~l~P~~a~lw~~l~~~ 338 (493)
T PRK15462 261 --QKQRKELGLIVTLTFFSMLFWAFAQQGGSSISLYIDRFVNRDMFGYTVPTAMFQSINAFAVMLCGVFLAWVVKESVAG 338 (493)
T ss_pred --HHHHhhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhccchhcceeeCHHHHHhHhHHHHHHHHHHHHHHHHHHhcC
Confidence 0001111 0011111122222222222222222221 12 234555566677777777777777666633
Q ss_pred -ch-----HHHHHHHHHHHHHHHHHhc----CC---chHHHHHHHHHHHHHHHHHHHHHHHHhhccccCchhhhhhhHHH
Q 039541 387 -KS-----SILTFCILSGTCSAICVAI----GD---EQEVLQIGLELASFFSACVAFNVLLVFGTELFTTCVRNSTTSLV 453 (521)
Q Consensus 387 -~~-----~~~~~~~~~~i~~~~~~~~----~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 453 (521)
|. =+.+++++++++.+++.+. .. .+.++++...++..++.-...|+..++++++.|++.|+..+|..
T Consensus 339 ~~~~s~~~Kfa~g~~~~g~~f~~l~~~~~~~~~~~~~s~~wl~~~~~~~t~gEl~~sPvgls~~~~laP~~~~g~~mg~w 418 (493)
T PRK15462 339 NRTVRIWGKFALGLGLMSAGFCILTLSARWSAMYGHSSLPLMVLGLAVMGFAELFIDPVAMSQITRIEIPGVTGVLTGIY 418 (493)
T ss_pred CCCCCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcCHHHHHHHHHHHHHHHHHHChHHHHHHHHhChHHHHHHHHHHH
Confidence 21 2567777777777666432 11 22366777888888999999999999999999999999999998
Q ss_pred HHhh-hhhhhHHHHHHHhhc--------------cchhHHHHHHHHHHHHH
Q 039541 454 RQAV-NLGAAFSPVLISAGR--------------QNEFLSFGVFGLVVFCF 489 (521)
Q Consensus 454 ~~~~-~~g~~~~p~~~~~~~--------------~~~~~~~~~~~~~~~~~ 489 (521)
.... .+|..++..+.+... ..+...|...+...++.
T Consensus 419 ~l~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~ 469 (493)
T PRK15462 419 MLLSGAIANYLAGVIADQTSQASFDASGAINYSINAYIEVFDQITWGALAC 469 (493)
T ss_pred HHHHHHHHHHHHHHHHHHhccccCCccccccchhhhHHHHHHHHHHHHHHH
Confidence 6643 566666666655321 12344566666655544
No 110
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.83 E-value=7.5e-19 Score=174.48 Aligned_cols=324 Identities=14% Similarity=0.107 Sum_probs=238.6
Q ss_pred CcceeeecceeeCCccccchhhHHHHHHHHHHhhhhhhhccccC--CCCchHHH-HHHHHHHHHHHHHHhcc-c------
Q 039541 101 DTTIISDWSLECAGSSILSGLPSSCFFIGCLLGGLALSTLGDSS--SLGRKKLL-FLSCFAMSITALATIFA-N------ 170 (521)
Q Consensus 101 ~~~i~~~~~~~~~~~~~~~~~~~s~~~lg~~i~~~~~g~l~dr~--~~Grr~~l-~~~~~~~~~~~~~~~~~-~------ 170 (521)
.+.+.+.+++++... |++..+..+-.++..|+.|.++||+ |+||||.. +++..+.+++.+++... +
T Consensus 25 ~~f~~~~~gl~~~~~----g~i~~~~~i~dai~dp~~G~~sDr~~tr~Grrrp~~l~g~i~~~~~~~llf~~~p~~~~~~ 100 (428)
T PF13347_consen 25 LYFYTDVLGLSPALA----GLILLVGRIWDAITDPLIGYLSDRTRTRWGRRRPWILIGAILLALSFFLLFSPPPAGLSFT 100 (428)
T ss_pred HHHHHHHcCCCHHHH----HHHHHHHHHhhhhcCCcEEEEEeeecccccccceEeehhhHHHHHHHHHhhccccchhhhh
Confidence 445567778888444 9999999999999999999999954 59976655 56888888888887766 4
Q ss_pred -cHHHHHHHHHHhhccchhhHhhhhhheeeeec-CcchhHHHHHHHHHHHHHHHHHHHH-HHhh----cC---CchhHHH
Q 039541 171 -NIWIYSTIRFVAGFFRAPIMTSVIVLLSEMVS-KRWRGQVVIIGFTFFSFGLVSLPAV-AYLS----RG---SSWKMLY 240 (521)
Q Consensus 171 -~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~-~~~rg~~~~~~~~~~~~G~~i~~~i-~~~~----~~---~~wr~~f 240 (521)
....+.+..++..++.........++..|+.+ +++|.+..+.-..+..+|.++...+ +.+. +. .+|++..
T Consensus 101 ~~~~~~~~~~~l~~~~~t~~~i~~~al~~~lt~~~~~R~~l~~~~~~~~~~g~~l~~~~~~~l~~~~g~~~~~~~~~~~~ 180 (428)
T PF13347_consen 101 AKLVWLFVFYILFDIAYTFVQIPYNALIPELTPDPDERTRLSSWRMIFSMIGSLLASFLAPILVSWFGGGDTSNGYRWMA 180 (428)
T ss_pred hHHHHHHHHHHHHHHhhhhccCchhhcCccccccHhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhhccCccchHHHHHH
Confidence 23345677777789988888888999999997 5789999999988888888655444 3222 21 2799999
Q ss_pred HHHHHHHHHHHhhhceeeecchhHHHhcCCHHHHHHHHHHHhhhcCCCCCCCccccccCCCCCccccCCCcccccccHHH
Q 039541 241 VWTSIPSIVCCIIIYPFISESPRWLFIHGHEAEAMAVLKRLASRSNYQSDYGLESCCLSNMPPKAKNVIPKLDLYSSLKD 320 (521)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (521)
++.+++.++..++..+..+|.++ +.+ +++++.+.++.+++
T Consensus 181 ~v~~iv~~v~~~i~~~~~ke~~~------~~~----------------------------------~~~~~~~~~~~~~~ 220 (428)
T PF13347_consen 181 LVLAIVGLVFFLITFFFVKERSV------EVT----------------------------------EQEKKISLRDSLRS 220 (428)
T ss_pred HHHHHHHHHHhhhhhheeeeccc------ccc----------------------------------ccccccccccchhh
Confidence 99999999888777788888211 000 00111112246788
Q ss_pred HhccHHHHHHHHHHHHHHHHHHHHH----HhHHhhccCCCccHHHHHHHHHHHhHhHHHHHHHHHhhcCCchHHHHHHHH
Q 039541 321 LFNRKWALRRLLTIMALAFGIGVVY----FGLLLGVGNLSFNIYLSLAFNGLLDIPAYLLTFILIERWSRKSSILTFCIL 396 (521)
Q Consensus 321 l~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~ 396 (521)
++++|.++......++.++...... |...+.+.+.+ .......+..+..+++.++.++++||+|+|+.+..+..+
T Consensus 221 ~~~nr~~~~l~~~~~~~~~~~~~~~~~~~y~~~~vl~~~~-~~~~~~~~~~~~~~v~~~~~~~l~~r~gk~~~~~~~~~~ 299 (428)
T PF13347_consen 221 LFRNRPFRILLLAFFLQWLAFALMNTFLPYYFTYVLGNEG-LISIFMLIFFVASIVGSPLWGRLSKRFGKKKVYIIGLLL 299 (428)
T ss_pred hcccchHHHHHHHHHHHHhhhhhhhhHHHHHHHHHhcCch-hhHHHHHHHHHHHHHHHHHHHHHHHHccceeehhhhHHH
Confidence 9999988777666666666544333 33333333322 123333455677888999999999999999999999999
Q ss_pred HHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHHHHHhhccccCch-------hhhhhhHHHHHhhhhhhhHHHHHHH
Q 039541 397 SGTCSAICVAIGDEQEVLQIGLELASFFSACVAFNVLLVFGTELFTTC-------VRNSTTSLVRQAVNLGAAFSPVLIS 469 (521)
Q Consensus 397 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~r~~~~~~~~~~~~~g~~~~p~~~~ 469 (521)
.+++.+.+.+.+..+.+..++..++.+++.+..+...+++.+|..+.+ ..|...|+.+....++..+++.+.+
T Consensus 300 ~~~~~~~~~~~~~~~~~~~~i~~~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s~~~~~~k~~~~la~~i~g 379 (428)
T PF13347_consen 300 AALGFLLLFFLGPGSPWLVLILFILAGIGYGAFFVIPWAMLADVIDYDEWKTGRRREGMYFSVNSFFIKIGQGLAGAIVG 379 (428)
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHhHhhhcccccccccccccchhhHHHhcCCCchHHHHHhhhhhhHHHHHHHHHHHH
Confidence 999988888776333377888889999999999999999999988743 3478888888888888888877765
No 111
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.82 E-value=1e-17 Score=155.02 Aligned_cols=353 Identities=13% Similarity=0.057 Sum_probs=258.2
Q ss_pred eeCCccccchhhHHHHHHHHHHhhhhhhhccccCCCCchHHH-HHHHHHHHHHHHHHhcccc---HHHHHHHHHHhhccc
Q 039541 111 ECAGSSILSGLPSSCFFIGCLLGGLALSTLGDSSSLGRKKLL-FLSCFAMSITALATIFANN---IWIYSTIRFVAGFFR 186 (521)
Q Consensus 111 ~~~~~~~~~~~~~s~~~lg~~i~~~~~g~l~dr~~~Grr~~l-~~~~~~~~~~~~~~~~~~~---~~~l~~~r~l~G~~~ 186 (521)
++.+.+...+...++..+-.++-+|+.|.++|+ .|+||.. -+...+..++.++..++++ ++..++..++..++.
T Consensus 52 ~~~~~~a~~gy~~aia~llia~LapiLG~iaD~--~g~Rk~~~~~f~~i~i~~~~~L~~i~~~s~~~~~l~~~il~~i~~ 129 (438)
T COG2270 52 DPASSTAYWGYASAIAGLLIALLAPILGTIADY--PGPRKKFFGFFTAIGIISTFLLWFIPPGSYLLLLLLFLILASIGF 129 (438)
T ss_pred CCcchhhHHHHHHHHHHHHHHHHHHHhhhhhcc--CCCcchHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHhc
Confidence 444445777999999999999999999999999 9976554 5566666677777777755 445566778889999
Q ss_pred hhhHhhhhhheeeeecCcchhHHHHHHHHHHHHHHHHHHHHH--Hhh-----------------cCCchhHHHHHHHHHH
Q 039541 187 APIMTSVIVLLSEMVSKRWRGQVVIIGFTFFSFGLVSLPAVA--YLS-----------------RGSSWKMLYVWTSIPS 247 (521)
Q Consensus 187 g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~i~~~i~--~~~-----------------~~~~wr~~f~~~~~~~ 247 (521)
....+...+++.+..++++-++..++-.....+|..+.-++. .+. +...-|..+.+.++..
T Consensus 130 ~~s~Vfyds~L~~~~~k~~~~riS~lg~~~gylgs~i~li~~~~~~~~~~~~~~~~~l~~l~~~~~~~~ri~~~l~A~W~ 209 (438)
T COG2270 130 EFSNVFYDSMLPRLTTKDNMGRISGLGWALGYLGSVILLIFVVLGFALGQQTGITIILLGLPPADGEDVRITGLLAALWW 209 (438)
T ss_pred chhheehhhHhhhhcCccccCcccccccccccccchHHHHHHHHHHhcccccceeEEeeccCccccccchhHHHHHHHHH
Confidence 999999999999999998888888776666666666654431 111 2345788899999998
Q ss_pred HHHHhhhceeeecchhHHHhcCCHHHHHHHHHHHhhhcCCCCCCCccccccCCCCCccccCCCcccccccHHHHhccHHH
Q 039541 248 IVCCIIIYPFISESPRWLFIHGHEAEAMAVLKRLASRSNYQSDYGLESCCLSNMPPKAKNVIPKLDLYSSLKDLFNRKWA 327 (521)
Q Consensus 248 ~~~~~~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 327 (521)
++..+..++..++.++-. ....+......+++. .+++++.+++..
T Consensus 210 li~~iPm~~~v~~~~~~~--~~~~~~l~~g~k~L~---------------------------------~t~k~i~~~~~i 254 (438)
T COG2270 210 LLFALPMILNVHDAEKIS--SPPPTALRNGFKELK---------------------------------STFKEIRGRKNL 254 (438)
T ss_pred HHHHhHHHhccccccccc--ccchHHHHHHHHHHH---------------------------------HHHHHHhcccch
Confidence 888878888888765310 011122223333332 267788888876
Q ss_pred HHHHHHHHHHHHHHHHHH-HhHHhhccCCCccH---HHHHHHHHHHhHhHHHHHHHHHhhcCCchHHHHHHHHHHHHHHH
Q 039541 328 LRRLLTIMALAFGIGVVY-FGLLLGVGNLSFNI---YLSLAFNGLLDIPAYLLTFILIERWSRKSSILTFCILSGTCSAI 403 (521)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~i~~~~ 403 (521)
...++..+++.=+.+... ....+-..+++.+. ...+....+..++|+++.|++.||+|.|+++.++.++..+.++.
T Consensus 255 ~~FLiA~~~~~DGv~til~~~~~fg~~~~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~~~lvi~~~~~~~ 334 (438)
T COG2270 255 VLFLIARFFYIDGVNTILAMGGVFGAADLGLSSTELLLIGIALSVVAALGAIIAGFLDERFGSKPVLMIGLVILSIAALY 334 (438)
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCceeehHHHHHHHHHHHH
Confidence 666666655555554333 33333333556543 44456677888999999999999999999999998888887777
Q ss_pred HHhcCCchHHHHHHHHHHHHHHHHHHHHHHHHhhccccCchhhhhhhHHHHHhhhhhhhHHHHHHHhh---ccchhHHHH
Q 039541 404 CVAIGDEQEVLQIGLELASFFSACVAFNVLLVFGTELFTTCVRNSTTSLVRQAVNLGAAFSPVLISAG---RQNEFLSFG 480 (521)
Q Consensus 404 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~~---~~~~~~~~~ 480 (521)
..+.... ...++..++.+++.+..++..-++..+.+|+++-++.+|+++..+..+++++|++.+.. ..+....+.
T Consensus 335 ~~~~~~~--~~f~i~gll~g~s~G~~qA~SRSy~~~lvp~~k~~~fFglyaltgra~S~~gp~lv~v~t~iTg~~r~g~~ 412 (438)
T COG2270 335 LIFLEGE--LDFWILGLLVGTSLGGAQASSRSYLARLVPKGKEGRFFGLYALTGRAASFLGPFLVAVITQITGSSRAGVL 412 (438)
T ss_pred HHHcccc--HHHHHHHHHHHHhcchHHHHHHHHHHHhCCCccccceeehhhhhhhHHHHHHHHHHHHHHHHhcchhhHHH
Confidence 7666554 45677778889999999999999999999999999999999999999999999999862 334555666
Q ss_pred HHHHHHHHHhHhhhccccCCCC
Q 039541 481 VFGLVVFCFGFFVVFLPETIGV 502 (521)
Q Consensus 481 ~~~~~~~~~~~~~~~~~~~~~~ 502 (521)
.+.++..++.+..+.+|..+++
T Consensus 413 ~i~vll~iGl~~L~~v~~~~~~ 434 (438)
T COG2270 413 SIIVLLLIGLLLLLRVKVPGRR 434 (438)
T ss_pred HHHHHHHhhHhhEEeecCCCCc
Confidence 6666666777777777665443
No 112
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.81 E-value=6.8e-18 Score=159.97 Aligned_cols=353 Identities=13% Similarity=0.065 Sum_probs=222.5
Q ss_pred ceeeecceeeCCccccchhhHHHHHHHHHHhhhhhhhccccCCCCchHHHHHHHHHHH--HHHH-HHhcc----ccHH-H
Q 039541 103 TIISDWSLECAGSSILSGLPSSCFFIGCLLGGLALSTLGDSSSLGRKKLLFLSCFAMS--ITAL-ATIFA----NNIW-I 174 (521)
Q Consensus 103 ~i~~~~~~~~~~~~~~~~~~~s~~~lg~~i~~~~~g~l~dr~~~Grr~~l~~~~~~~~--~~~~-~~~~~----~~~~-~ 174 (521)
-+.++-|++.+|. |.+.++..+...+.+|+.|.++|| .|.||-++..+.+.. .+.+ ...+. .|++ .
T Consensus 33 WL~~~~GLs~~~i----G~i~s~~~~~~l~~qp~~G~i~Dk--lg~kK~Ll~~i~~l~~l~~pff~~v~~pll~~n~~lg 106 (412)
T PF01306_consen 33 WLTQVAGLSGTEI----GIIFSAGSLFALLAQPVYGFISDK--LGLKKHLLWFIAILLLLFGPFFIYVFGPLLQSNFWLG 106 (412)
T ss_dssp HHHHHH---HHHH----HHHHHHHHHHHHHTHHHHHHHHHH--CTTCSHHHHHHHHHHHTCHHHHHHTHHHHHHTT-HHH
T ss_pred HHccccCCCHHHH----HHHHHHHHHHHHHHHHhHHHhcch--hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445689999777 999999999999999999999999 997776554333222 2222 21222 3332 3
Q ss_pred HHHHHHHhhccchhhHhhhhhheeeeecCcchhHHHHHHHHHHHHHHHHHHHH-HHhhcCCchhHHHHHHHHHHHHHHhh
Q 039541 175 YSTIRFVAGFFRAPIMTSVIVLLSEMVSKRWRGQVVIIGFTFFSFGLVSLPAV-AYLSRGSSWKMLYVWTSIPSIVCCII 253 (521)
Q Consensus 175 l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~i~~~i-~~~~~~~~wr~~f~~~~~~~~~~~~~ 253 (521)
.+++-+..|+......++.-+++.++. ++.+.-.|-.-++.++|.+++..+ |.+.+ .+-+..||+....+++..++
T Consensus 107 ~iig~i~l~~~f~~~~~~~Ea~~er~s--r~~~feYG~~R~wGSig~ai~s~~~G~L~~-i~p~~~fwi~s~~~~il~ll 183 (412)
T PF01306_consen 107 AIIGGIYLGLVFNAGVPLSEAYAERVS--RRNGFEYGRARMWGSIGFAIASLLAGILFN-INPNIIFWIASAAAIILLLL 183 (412)
T ss_dssp HHHTTTTTTTTTTTHHHHHHHHHHHHH--HHHSS-HHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcccchHHHHHHHHHH--HHhcCCcchHHHHhhHHHHHHHHHhheeee-eCccHHHHHHHHHHHHHHHH
Confidence 444455566666666777777776654 344555666777888888888877 55554 45567888777666666544
Q ss_pred hceeeecchhHHHhcCCHHHHHHHHHHHhhhcCCCCCCCccccccCCCCCccccCCCcccccccHHHHhccHHHHHHHHH
Q 039541 254 IYPFISESPRWLFIHGHEAEAMAVLKRLASRSNYQSDYGLESCCLSNMPPKAKNVIPKLDLYSSLKDLFNRKWALRRLLT 333 (521)
Q Consensus 254 ~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 333 (521)
.++.-|+.++.....+ .+..+++........+++|+|++|...+.
T Consensus 184 l~~~~~~~~~~~~~~~-----------------------------------~~~~~~~~~~~~~~~~l~k~~~fw~~~l~ 228 (412)
T PF01306_consen 184 LLLLKPDVPPQAEVAD-----------------------------------ALGAKKDKVSLKDVLSLFKMRNFWFFVLF 228 (412)
T ss_dssp HHSS---SSSSS-SST-----------------------------------TSSS------HHHHHHHTTSHHHHHHHHH
T ss_pred HHHcCCcCchhhhhhc-----------------------------------ccccCCCCCcHHHHHHHhcchhHHHHHHH
Confidence 4444444321100000 00000000011256789999998877666
Q ss_pred HHHHHHHHHHHHHhHHhhc----cCCCccHHHH---HHHHHHHhHhHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHh
Q 039541 334 IMALAFGIGVVYFGLLLGV----GNLSFNIYLS---LAFNGLLDIPAYLLTFILIERWSRKSSILTFCILSGTCSAICVA 406 (521)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~---~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~i~~~~~~~ 406 (521)
...............+.+. ++.+.+.... ..+..+.+++...+..++.+|+|.|+.++++..++.+=.....+
T Consensus 229 v~g~~~~Y~vfdqqf~~y~~~~f~~~~~g~~~~G~l~s~~v~~E~~~m~~~p~li~rig~k~~Lllag~i~~iRi~~~~~ 308 (412)
T PF01306_consen 229 VIGVAAIYDVFDQQFPIYFASFFQSAGQGNQMYGYLWSVQVFLEALMMFFSPWLINRIGAKNLLLLAGVIMAIRIIGSGF 308 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcccccChhHHhHHHHHHHHHHHHHHHHHHHHHHhcChHhHHHHHHHHHHHHHHHHhh
Confidence 5555544443332223222 2322222222 23344667788889999999999999999999999999888888
Q ss_pred cCCchHHHHHHHHHHHHHHHHHHHHHHHHhhccccCchhhhhhhHHH-HHhhhhhhhHHHHHHHh--hccchhHHHHHHH
Q 039541 407 IGDEQEVLQIGLELASFFSACVAFNVLLVFGTELFTTCVRNSTTSLV-RQAVNLGAAFSPVLISA--GRQNEFLSFGVFG 483 (521)
Q Consensus 407 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~-~~~~~~g~~~~p~~~~~--~~~~~~~~~~~~~ 483 (521)
.++. +...+.-.+-++-.........-++.+.+|++..++...+. +....+|.++.+.+.|. +..++..+|.+++
T Consensus 309 ~~~~--~~i~~~klLH~~e~~l~lva~fkYI~~~fd~rlsAt~y~v~~~~~~~~~~~i~s~~~G~lyd~~G~~~tylimg 386 (412)
T PF01306_consen 309 ATNP--WVISLIKLLHALEFPLLLVAAFKYITAHFDKRLSATLYLVGFQFAKQIGIIILSPLAGYLYDRIGFQHTYLIMG 386 (412)
T ss_dssp --SH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHS-GGGHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hcch--HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhHHHHHHHHHHHHHHHHHHHHHhhhHHhhHhhcCcHHHHHHHH
Confidence 7766 67788888888888888889999999999999988888885 45668888888888886 3445666788888
Q ss_pred HHHHHHhHhh-hccccCCC
Q 039541 484 LVVFCFGFFV-VFLPETIG 501 (521)
Q Consensus 484 ~~~~~~~~~~-~~~~~~~~ 501 (521)
.+.++..++. +.+++.++
T Consensus 387 ~iv~~~~li~~f~l~~~~~ 405 (412)
T PF01306_consen 387 LIVLPFTLISAFTLKKDKK 405 (412)
T ss_dssp HHHHHHHHHHHHHS--SSS
T ss_pred HHHHHHHHHheeeecCCCc
Confidence 7777666554 44544333
No 113
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.79 E-value=2.8e-18 Score=159.39 Aligned_cols=357 Identities=11% Similarity=0.041 Sum_probs=238.4
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHHhhhhccccCCcccccCCcccccCCccccccccCcceecCCCCcceeeecceeeCCc
Q 039541 36 NLGLPQFIQVILISLLLIFESQQTFISVYTDEEPTWHCINNTTTCSSSSDICTLSKSAWAWDRPSDTTIISDWSLECAGS 115 (521)
Q Consensus 36 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~p~~~c~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 115 (521)
+..++||.+++++++..+.+++....++.. .......|+ +.+..
T Consensus 38 rVy~rRW~vLl~~slL~~SN~~qWI~ya~i-----------------------------------~n~~~~~Yg-s~~~~ 81 (480)
T KOG2563|consen 38 RVYPRRWVVLLAFSLLNFSNGMQWIQYAPI-----------------------------------NNYVNSFYG-SSSAA 81 (480)
T ss_pred ccchhHhHHHHHHHHHHhcCcchheeehhH-----------------------------------HHHHHHHhc-chHHH
Confidence 466788999999999988887776666555 444555666 44333
Q ss_pred cccchhhHHHHHHHHHHhhhhhhhccccCCCCchHHHHHHHHHHHHHHHHHhcc------ccHH--HHHHHHHHhhccch
Q 039541 116 SILSGLPSSCFFIGCLLGGLALSTLGDSSSLGRKKLLFLSCFAMSITALATIFA------NNIW--IYSTIRFVAGFFRA 187 (521)
Q Consensus 116 ~~~~~~~~s~~~lg~~i~~~~~g~l~dr~~~Grr~~l~~~~~~~~~~~~~~~~~------~~~~--~l~~~r~l~G~~~g 187 (521)
-|+.-+|++.+....+++-|+.|| +|-|..++++..+.++|+.+-..+ +.++ ..+.+..+.+.+.-
T Consensus 82 ----~wlsmIym~v~vp~gf~~mw~ldk--~GLR~a~llgt~ln~iGa~Ir~iss~p~v~~~f~~~l~~~Gq~iaa~Aq~ 155 (480)
T KOG2563|consen 82 ----DWLSMIYMVVSVPFGFAAMWILDK--FGLRTALLLGTVLNGIGAWIRLISSLPFVPPLFRRPLTHTGQSIAAAAQP 155 (480)
T ss_pred ----HHHHHHHHHHHHHHhhHHHHhhcc--cchHHHHHHHHHHHHHHHHHhhhccCccccccchhhhhHHhHHHHHHhhh
Confidence 788999999999999999999999 999999999999999999997766 2345 77788999999888
Q ss_pred hhHhhhhhheeeeecCcchhHHHHHHHHHHHHHHHHHHHHH-Hhhc------CCchhH--HHHHHHHHHHHHHhhhceee
Q 039541 188 PIMTSVIVLLSEMVSKRWRGQVVIIGFTFFSFGLVSLPAVA-YLSR------GSSWKM--LYVWTSIPSIVCCIIIYPFI 258 (521)
Q Consensus 188 ~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~i~~~i~-~~~~------~~~wr~--~f~~~~~~~~~~~~~~~~~~ 258 (521)
...........-|+++++|..+..+-.++..+|.+++.++. .+.. +..|.. .|+..+.++.+.+++..+..
T Consensus 156 Fim~lPskiA~~WF~~~qra~A~~~~v~~n~LGvavg~llppilV~~~~~~~~~~~~~~~~f~~~~~l~~l~l~l~~~~~ 235 (480)
T KOG2563|consen 156 FILGLPSKIAAVWFPPDQRAIATVLGVMGNPLGVAVGFLLPPILVPSSKDSEDNSWLFFTLFLGVECLAALLLALVLFVF 235 (480)
T ss_pred HhhccccHHHHhhCCcchhhhhhhHHHhcchHHHHHHhhccceecCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 77777778888899999999999998888888888887774 3322 345655 45544544444443444444
Q ss_pred ecchhHHHhcCCHHHHHHHHHHHhhhcCCCCCCCccccccCCCCCccccCCCcccccccHHHHhccHHHHHHHHHHHHHH
Q 039541 259 SESPRWLFIHGHEAEAMAVLKRLASRSNYQSDYGLESCCLSNMPPKAKNVIPKLDLYSSLKDLFNRKWALRRLLTIMALA 338 (521)
Q Consensus 259 ~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 338 (521)
++.|+... ....+.. .+.+...+.++.++++++....++..+..
T Consensus 236 ~~~P~tPp---s~s~~~~---------------------------------~~~~f~~si~~~~~n~~F~il~~~ygi~~ 279 (480)
T KOG2563|consen 236 TKKPPTPP---SASQAAL---------------------------------QDASFPKSIKSCFKNRQFIILAICYGIGL 279 (480)
T ss_pred CCCCCCCC---chhHhhh---------------------------------hcCcHHHHHHHHHcCccHHHHHHHHhhhH
Confidence 44332100 0000000 01112247888999987544433333332
Q ss_pred HHHHHHHHhHHhhccCCCc---cHHHHHHHHHHHhHhHHHHHHHHHhhcCCch-HHHHHHHHHHHH-HHHHHhcCCchH-
Q 039541 339 FGIGVVYFGLLLGVGNLSF---NIYLSLAFNGLLDIPAYLLTFILIERWSRKS-SILTFCILSGTC-SAICVAIGDEQE- 412 (521)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~-~~~~~~~~~~i~-~~~~~~~~~~~~- 412 (521)
...+..++.+...+...++ .....+....++++++++++|.+.||.+.-+ .+.+......++ +.+.........
T Consensus 280 g~F~~l~~~l~~~l~~sgY~~~~aG~ig~l~iv~Gmlga~~~gii~Dktk~fk~~~~v~~~~~~v~~~~l~~~t~~~~~~ 359 (480)
T KOG2563|consen 280 GLFNSLSTLLNLALCPSGYEGVFAGYIGALMIVAGMLGALASGIIADKTKKFKLTTLVLYLFALVGTLMLLTCTLFLGDS 359 (480)
T ss_pred HHHHHHHHHhhhccccccCCccccchhHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccCCce
Confidence 2333333333322222232 3455566677888999999999999987644 344444444444 222222222211
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccccCchhhhhhhHHHHHhhhhhhhHHHHHHHh
Q 039541 413 VLQIGLELASFFSACVAFNVLLVFGTELFTTCVRNSTTSLVRQAVNLGAAFSPVLISA 470 (521)
Q Consensus 413 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~ 470 (521)
+.......+.|++..+..|+..-+..|..-|..-++..|+.+..+.+-+++-.++.+.
T Consensus 360 viv~~t~~~~g~~~~~~~Pig~ElgvE~TyPv~E~tSsGll~~~gq~f~~~~~~~~~~ 417 (480)
T KOG2563|consen 360 VIVFTTCGLLGFFGTGYLPIGFELGVETTYPVAEGTSSGLLNLSGQIFGVILVFIMGI 417 (480)
T ss_pred EehhhhHHHHHHhhcCCCCcceeeeeeeccccCCcccceeEEeehhHHHHHHHHHHHH
Confidence 4556666777777778888888888887555555889999998888888877777765
No 114
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.79 E-value=1e-16 Score=150.94 Aligned_cols=268 Identities=11% Similarity=0.010 Sum_probs=179.1
Q ss_pred hccccHHHHHHHHHHhhccchhhHhhhhhheeeeecCcchhHHHHHHHHHHHHHHHHHHHH-HHhhcC------------
Q 039541 167 IFANNIWIYSTIRFVAGFFRAPIMTSVIVLLSEMVSKRWRGQVVIIGFTFFSFGLVSLPAV-AYLSRG------------ 233 (521)
Q Consensus 167 ~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~i~~~i-~~~~~~------------ 233 (521)
+...+|+.++++-++.|.|.+...+....++++..+++++++.+++.+.+.++|..++|++ +.++..
T Consensus 5 ~~~~~~~~~l~~~f~~g~G~~~lq~~~n~~v~~~~~~~~~~~~l~~~~~~~~~G~~~gP~i~~~~i~~~~~~~~~~~~~~ 84 (310)
T TIGR01272 5 ASQRYYVLFLGALFVLASGLTILQVAANPYVSILGPIETAASRLALTQAFNKLGTTVAPLFGGSLILSGAGDLSMQVATA 84 (310)
T ss_pred HHhhHHHHHHHHHHHHHhhHHHHHhhHHHHHHHHCCcchHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCcchhhhhhhh
Confidence 3557899999999999999999999999999999999999999999999999999999999 444421
Q ss_pred ----CchhHHHHHHHHHHHHHHhh-hceeeecchhHHHhcCCHHHHHHHHHHHhhhcCCCCCCCccccccCCCCCccccC
Q 039541 234 ----SSWKMLYVWTSIPSIVCCII-IYPFISESPRWLFIHGHEAEAMAVLKRLASRSNYQSDYGLESCCLSNMPPKAKNV 308 (521)
Q Consensus 234 ----~~wr~~f~~~~~~~~~~~~~-~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (521)
.+|+++|++.+.+.++..++ .+..+||.++ +.++ + . ..
T Consensus 85 ~~~~~~~~~~yl~ia~~~~~~~i~~~~~~~p~~~~------~~~~--~--------~------------------~~--- 127 (310)
T TIGR01272 85 NAEAAKVHTPYLLLAGALAVLAIIFAFLPLPELQE------ADVA--R--------V------------------SS--- 127 (310)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCc------cccc--c--------c------------------cc---
Confidence 47999999776665555422 2223344210 0000 0 0 00
Q ss_pred CCcccccccHHHHhccHHHHHHHHHHHHHHHHHHHHHHhHHhhccC---CCccH---HHHHHHHHHHhHhHHHHHHHHHh
Q 039541 309 IPKLDLYSSLKDLFNRKWALRRLLTIMALAFGIGVVYFGLLLGVGN---LSFNI---YLSLAFNGLLDIPAYLLTFILIE 382 (521)
Q Consensus 309 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~---~~~~~~~~~~~~~~~~~~g~l~d 382 (521)
++. ...+.++++|..+...+..+++...........+.++.+ .+.+. .........+.++|+++++++.|
T Consensus 128 ~~~----~~~~~~~~~~~~~l~~~~~f~yvg~e~~~~~w~~~yl~~~~~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~ 203 (310)
T TIGR01272 128 GDT----TQKTSAFQFTHLVLGALGIFVYVGAEVSAGSFLVNFLSDPHALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMP 203 (310)
T ss_pred ccc----cchhhHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 000 011235566665543333333322222333333444432 34443 23344555777899999999999
Q ss_pred hcCCchHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHHHHHhhccccCchhhhhhhHHHHHhhhhhhh
Q 039541 383 RWSRKSSILTFCILSGTCSAICVAIGDEQEVLQIGLELASFFSACVAFNVLLVFGTELFTTCVRNSTTSLVRQAVNLGAA 462 (521)
Q Consensus 383 r~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ 462 (521)
|+++|+.+.++..+..++.++....... ......++.+++.+..+|...+...+..|++. +++.++. ..+.+|++
T Consensus 204 r~g~~~~l~~~~~l~~~~~~l~~~~~~~---~~~~~~~l~g~~~s~i~P~~~s~a~~~~~~~~-~~asai~-~~~~~Gg~ 278 (310)
T TIGR01272 204 MISQGRYLAFNAFLAVLLSIGAALTHGY---VAMWFVLALGLFNSIMFPTIFSLALNALGRHT-SQGSGIL-CLAIVGGA 278 (310)
T ss_pred HhCHHHHHHHHHHHHHHHHHHHHHcCCH---HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhh-hhhHHHH-HHHHhcch
Confidence 9999998888887777776555444322 23345667889999999999999999888754 6677775 56789999
Q ss_pred HHHHHHHhh--ccchhHHHH
Q 039541 463 FSPVLISAG--RQNEFLSFG 480 (521)
Q Consensus 463 ~~p~~~~~~--~~~~~~~~~ 480 (521)
+.|.+.|.. ..+....+.
T Consensus 279 i~P~l~G~lad~~g~~~a~~ 298 (310)
T TIGR01272 279 IVPLLQGSLADCLGIQLAFA 298 (310)
T ss_pred HHHHHHHHHHHhccchHHHH
Confidence 999988863 234555554
No 115
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=99.68 E-value=9.2e-14 Score=129.49 Aligned_cols=321 Identities=15% Similarity=0.080 Sum_probs=211.7
Q ss_pred eeeecceeeCCccccchhhHHHHHHHHHHhhhhhhhccccCCCC-----chHHH-HHHHHHHHHHHHHHhcc-----c--
Q 039541 104 IISDWSLECAGSSILSGLPSSCFFIGCLLGGLALSTLGDSSSLG-----RKKLL-FLSCFAMSITALATIFA-----N-- 170 (521)
Q Consensus 104 i~~~~~~~~~~~~~~~~~~~s~~~lg~~i~~~~~g~l~dr~~~G-----rr~~l-~~~~~~~~~~~~~~~~~-----~-- 170 (521)
+..|++++. +..+.+.+..++... ..+.+|+.+|+ .+ ||..+ ..|.++...+..+..++ .
T Consensus 6 MIvEL~vpA----~lv~~lval~~~~ap-~R~~~G~~SD~--~~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~~l~~~~ 78 (403)
T PF03209_consen 6 MIVELGVPA----WLVALLVALHYLVAP-LRVWFGHRSDT--HPSILGWRRTPYIWGGTLLQAGGLAIAPFALLLLAESG 78 (403)
T ss_pred HHHHhccHH----HHHHHHHHHHHHHHH-HHHHhcccccc--CcccCcCCchhhhHHHHHHHHHHHHHHHHHHHHHcccc
Confidence 456777776 566888888776554 58899999999 88 77555 45777777666665543 2
Q ss_pred -----cH--H--HHHHHHHHhhccchhhHhhhhhheeeeecCcchhHHHHHHHHHHHHHHHHHHHH-HHhhcCCchhHHH
Q 039541 171 -----NI--W--IYSTIRFVAGFFRAPIMTSVIVLLSEMVSKRWRGQVVIIGFTFFSFGLVSLPAV-AYLSRGSSWKMLY 240 (521)
Q Consensus 171 -----~~--~--~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~i~~~i-~~~~~~~~wr~~f 240 (521)
+. + ...+..++.|+|.+.......++++|..|+++|+++.++......+|.+++..+ +.++++++-.-..
T Consensus 79 ~~~~~~~~~g~~~a~l~F~l~G~G~~~s~T~~lALl~D~~~e~~R~~~v~ivw~Mli~G~iv~ai~~g~lL~~~s~~rL~ 158 (403)
T PF03209_consen 79 QQSSGPFWLGLALAALAFLLYGLGVHASGTSFLALLADLAPEERRPRVVAIVWVMLIVGIIVSAIVFGRLLDPFSPERLI 158 (403)
T ss_pred cccccccHHHHHHHHHHHHHHHhhHhHhHHHHHHHHHhcCCHhhhhhhHHHHHHHHHHHHHHHHHHHHHHccccCHHHHH
Confidence 22 2 445567899999999999999999999999999999999999999999999888 8888766543322
Q ss_pred HH---HHHHHHHHHhhhceeeecchhHHHhcCCHHHHHHHHHHHhhhcCCCCCCCccccccCCCCCccccCCCccccccc
Q 039541 241 VW---TSIPSIVCCIIIYPFISESPRWLFIHGHEAEAMAVLKRLASRSNYQSDYGLESCCLSNMPPKAKNVIPKLDLYSS 317 (521)
Q Consensus 241 ~~---~~~~~~~~~~~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (521)
-+ .+++.++..++..+ -.|.+.. .. ...+++++.+..+.
T Consensus 159 ~v~~~~a~i~~~l~~ia~w-g~E~r~~----------------------~~---------------~~~~~~~~~~f~~a 200 (403)
T PF03209_consen 159 QVIQGVALIALLLNLIALW-GQEPRRS----------------------RR---------------AAAAERPRPPFREA 200 (403)
T ss_pred HHHHHHHHHHHHHHHHHHH-hcccCCc----------------------cc---------------ccCCCCCCccHHHH
Confidence 22 22222222212222 1222100 00 00011122223346
Q ss_pred HHHHhccHHHHHHHHHHHHHHHHHHHHHHhH-HhhccCCCccHHHH---HHHHHHHhHhHHHHHHHHHh-hcCCchHHHH
Q 039541 318 LKDLFNRKWALRRLLTIMALAFGIGVVYFGL-LLGVGNLSFNIYLS---LAFNGLLDIPAYLLTFILIE-RWSRKSSILT 392 (521)
Q Consensus 318 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~g~l~d-r~g~~~~~~~ 392 (521)
++++..+|+.++.+...++..+..+..--.+ ||--+.++.++... ....+.+.++|..+.+++.. |.++++...+
T Consensus 201 ~~~~~~~~~a~~f~~fl~l~t~a~~~QD~iLEPygg~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~ 280 (403)
T PF03209_consen 201 WRQVWASPQARRFFVFLFLGTLAFFMQDVILEPYGGEVFGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAAL 280 (403)
T ss_pred HHHHHhCCChhHHHHHHHHHHHHHHhhHHHcCCchhHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHH
Confidence 7788888886666555554444333222221 22223344444333 34455677778877777666 6788888888
Q ss_pred HHHHHHHHHHHHHhcCCchH-HHHHHHHHHHHHHHHHHHHHHHHhhccccCchhhhhhhHHHHHhhhhhhhHHHHHHH
Q 039541 393 FCILSGTCSAICVAIGDEQE-VLQIGLELASFFSACVAFNVLLVFGTELFTTCVRNSTTSLVRQAVNLGAAFSPVLIS 469 (521)
Q Consensus 393 ~~~~~~i~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~ 469 (521)
+...+.+++..+.+...... +.+....++.|++.+.......+...+..+++..|..+|.-...+.++..++..+.|
T Consensus 281 G~~~~~~~f~lii~a~~~~~~~~~~~~~~l~G~g~G~f~vgals~mM~lt~~~~aG~~mG~WGaaQA~A~Glg~~~GG 358 (403)
T PF03209_consen 281 GCLLGALAFALIILAGPLGSPWLFRPGVFLLGLGNGLFTVGALSLMMDLTSAGRAGLFMGAWGAAQAIARGLGTFLGG 358 (403)
T ss_pred HHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhhHHHHHHHHHHHhCCCCcchhHHHHHHHHHHHHHHHHHHHHHH
Confidence 88888888776665433322 677888899999999888888888889998888899999888887666665555554
No 116
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=99.68 E-value=1.5e-15 Score=145.74 Aligned_cols=185 Identities=17% Similarity=0.130 Sum_probs=144.0
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHhhhhccccCCcccccCCcccccCCccccccccCcceecCCCCcceee-ecceeeCCcc
Q 039541 38 GLPQFIQVILISLLLIFESQQTFISVYTDEEPTWHCINNTTTCSSSSDICTLSKSAWAWDRPSDTTIIS-DWSLECAGSS 116 (521)
Q Consensus 38 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~p~~~c~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~i~~-~~~~~~~~~~ 116 (521)
.+..|+.+.+..+..++.+....++... . .|.+++ |.+.+.
T Consensus 29 ~~t~wrsi~l~~~~sfl~~v~~sI~~~s---------------------------~-------wpYl~~lD~~A~~---- 70 (488)
T KOG2325|consen 29 RKTNWRSIYLALLNSFLVAVQFSIYLTS---------------------------M-------WPYLQKLDPTATA---- 70 (488)
T ss_pred cCCchHhHHHHHHHHHHHhhhheEEEee---------------------------c-------chhhhhcCCCCCc----
Confidence 3556777777777778777776655444 1 223222 344444
Q ss_pred ccchhhHHHHHHHHHHhhhhhhhccccCCCCc-hHHHHHHHHHHHHHHHHH-hcc---c-cHHHHHHHHHHhhccchhhH
Q 039541 117 ILSGLPSSCFFIGCLLGGLALSTLGDSSSLGR-KKLLFLSCFAMSITALAT-IFA---N-NIWIYSTIRFVAGFFRAPIM 190 (521)
Q Consensus 117 ~~~~~~~s~~~lg~~i~~~~~g~l~dr~~~Gr-r~~l~~~~~~~~~~~~~~-~~~---~-~~~~l~~~r~l~G~~~g~~~ 190 (521)
...|++.++..+|.+++++.+|....| .|+ |+.++.+.++..+|+++. ++. + ..+.++++|++.|+|.| ..
T Consensus 71 ~ffG~viaa~slg~~i~~liF~~Ws~k--~~~~k~Pli~s~ii~~~g~llY~~l~~~~~~~~y~mL~~R~l~Gvg~~-n~ 147 (488)
T KOG2325|consen 71 TFFGLVIAASSLGHAIFSLIFGIWSNK--TGSVKKPLIVSFLIAIIGNLLYLALAYVPNGVKYLMLVARILTGVGVG-NF 147 (488)
T ss_pred chhhHHHHHHHHHHHhcchhhcccccc--cCCcccCHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHcCcCcc-cH
Confidence 445999999999999999999999999 776 888999999999999988 433 3 67899999999999987 67
Q ss_pred hhhhhheeeeecCcchhHHHHHHHHHHHHHHHHHHHHHHhhcC-----------Cc---hhHHHHHHHHHHHHHHhhhce
Q 039541 191 TSVIVLLSEMVSKRWRGQVVIIGFTFFSFGLVSLPAVAYLSRG-----------SS---WKMLYVWTSIPSIVCCIIIYP 256 (521)
Q Consensus 191 ~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~i~~~i~~~~~~-----------~~---wr~~f~~~~~~~~~~~~~~~~ 256 (521)
...-+|+++....++|.++++....+..+|.++||.++..... .. +..+-|+.+++.++..+++.+
T Consensus 148 a~lR~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp~~q~~f~~Lg~~G~~i~~~~~~n~YTap~w~m~i~~i~~~v~i~~ 227 (488)
T KOG2325|consen 148 AVLRAYIADASTVEDRPRAFAATSGGFVLGIILGPTIQLAFTPLGEKGFMILPGLIFNMYTAPAWLMAILWIIYIVIILF 227 (488)
T ss_pred HHHHHHHHhccCccchHHHHHHhhhHHHHHHHHhHHHHHHHhhhcCCceEEcCcceEEecchHHHHHHHHHHHHHHHHHh
Confidence 7888999998888999999999999899999999888543221 11 245778888888888888888
Q ss_pred eeecchh
Q 039541 257 FISESPR 263 (521)
Q Consensus 257 ~~~esp~ 263 (521)
+++|.++
T Consensus 228 ~f~E~~~ 234 (488)
T KOG2325|consen 228 FFKEVYR 234 (488)
T ss_pred heeeccc
Confidence 8898754
No 117
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=99.61 E-value=7.9e-17 Score=161.15 Aligned_cols=352 Identities=15% Similarity=0.115 Sum_probs=3.0
Q ss_pred CcceeeecceeeCCccccchhhHHHHHHHHHHhhhhhhhccccCCCCchHHHHHHHHHHHHHHHHHhccc----------
Q 039541 101 DTTIISDWSLECAGSSILSGLPSSCFFIGCLLGGLALSTLGDSSSLGRKKLLFLSCFAMSITALATIFAN---------- 170 (521)
Q Consensus 101 ~~~i~~~~~~~~~~~~~~~~~~~s~~~lg~~i~~~~~g~l~dr~~~Grr~~l~~~~~~~~~~~~~~~~~~---------- 170 (521)
+++|++.|+++..+. |++.+.+-++..+..++..++.+| ..|-|.+-+|.++.++|++++++-+
T Consensus 26 lttiErRF~l~S~~~----G~i~s~~di~~~~~~~~vsy~g~~--~hrprwig~g~~~~~~g~~l~~lPhf~~~~y~~~~ 99 (539)
T PF03137_consen 26 LTTIERRFGLSSSQS----GLISSSYDIGSLVVVLFVSYFGGR--GHRPRWIGIGALLMGLGSLLFALPHFLSGPYSYEE 99 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHhcCCCHHHH----HHHHHHHHHHHHHHHHHHHHHhhh--cCCcceeeecHHHHHHHHHHHhccHhhcCCCcccc
Confidence 889999999999777 999999999999999999999999 8888888999999999999876510
Q ss_pred ----------------------------------------cHHHHHHHHHHhhccchhhHhhhhhheeeeecCcchhHHH
Q 039541 171 ----------------------------------------NIWIYSTIRFVAGFFRAPIMTSVIVLLSEMVSKRWRGQVV 210 (521)
Q Consensus 171 ----------------------------------------~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~ 210 (521)
-++.++++.++.|+|....++...+|+-|..++++-+..+
T Consensus 100 ~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tYiDDnv~~~~splYi 179 (539)
T PF03137_consen 100 ASNSNGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITYIDDNVSKKNSPLYI 179 (539)
T ss_dssp ----------------------------------------------------SSS-------------------------
T ss_pred ccccccccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceeeeeccccccccCccch
Confidence 1357888999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHH-hhc------------------C----CchhHHHHHHHHHHHHHHhhhceeeecchhHHHh
Q 039541 211 IIGFTFFSFGLVSLPAVAY-LSR------------------G----SSWKMLYVWTSIPSIVCCIIIYPFISESPRWLFI 267 (521)
Q Consensus 211 ~~~~~~~~~G~~i~~~i~~-~~~------------------~----~~wr~~f~~~~~~~~~~~~~~~~~~~esp~~~~~ 267 (521)
|++.+...+|.++|.++|. .+. + ..|..-|++.+.+.++.. +.++++|+.-...
T Consensus 180 Gi~~~~~~lGPa~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~dp~WvGAWWLGfli~g~~~~l~a-ipl~~FPk~lp~~-- 256 (539)
T PF03137_consen 180 GILYAMSILGPALGFLLGSFCLRIYVDFPKVPPDGVGITPSDPRWVGAWWLGFLICGILLFLSA-IPLFFFPKKLPGT-- 256 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred hhhhHHhhccHHHHHHHHHHHHhceeCCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHH-HHHHcCCccCCCc--
Confidence 9999999999999988853 221 0 136677777777777777 4445555432111
Q ss_pred cCCHHHHHHHHHHHhhhcCCCCCCCccccccCCCCCccccCCCcccccccHHHHhccHHHHHHHHHHHHHHHHHHHHHHh
Q 039541 268 HGHEAEAMAVLKRLASRSNYQSDYGLESCCLSNMPPKAKNVIPKLDLYSSLKDLFNRKWALRRLLTIMALAFGIGVVYFG 347 (521)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (521)
++..++.+...++. .+.. ..+..+.+........-++.....+.+++||.+....+......+........
T Consensus 257 ~~~~~~~~~~~~~~---~~~~------~~~~~~~~~~~~~~~~~~df~~~l~~Ll~Np~f~~~~la~~~~~~~~~G~~tF 327 (539)
T PF03137_consen 257 SERQEEKESSERKE---EDSD------KDSFKDPKSKKSFGKSIKDFPKALKRLLTNPVFMCLILAGVFESFIVSGFATF 327 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccccchhhhhhcch---hhhh------hhcccccccccchhhhhhhHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHH
Confidence 00000000000000 0000 00000000000011222344557888999998766666555555555444444
Q ss_pred HHhhcc-CCCccHHHHHHHHHH----HhHhHHHHHHHHHhhcC--CchHHHHHHHHHHHHHHH---HHhc----------
Q 039541 348 LLLGVG-NLSFNIYLSLAFNGL----LDIPAYLLTFILIERWS--RKSSILTFCILSGTCSAI---CVAI---------- 407 (521)
Q Consensus 348 ~~~~~~-~~~~~~~~~~~~~~~----~~~~~~~~~g~l~dr~g--~~~~~~~~~~~~~i~~~~---~~~~---------- 407 (521)
.|-+++ +++.++..+..+.++ +..+|.+++|++.+|++ .|..+....+...+..+. +.+.
T Consensus 328 ~pKylE~QF~~sas~A~~l~G~v~ip~~~~G~llGG~ivkk~kl~~~~~~~~~~v~~~v~~~~~~~~~~~~C~~~~~aGv 407 (539)
T PF03137_consen 328 LPKYLESQFGLSASQASLLTGIVSIPGAALGILLGGYIVKKFKLSARGAAKFCIVVSIVSVILYSPLFFLGCPNPPIAGV 407 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHhCCCHHHHHHHHhhhhcchhheehheEEEEEEEecCcHHHHHHHHHHHHHHHHHHHHHHHeecCCCCceeee
Confidence 555544 456665555444443 45578899999999975 344444333333333322 1111
Q ss_pred --CC----------------------------ch--------H-HHHHHHHHHHHHHHHHHHHHHHHhhccccCchhhhh
Q 039541 408 --GD----------------------------EQ--------E-VLQIGLELASFFSACVAFNVLLVFGTELFTTCVRNS 448 (521)
Q Consensus 408 --~~----------------------------~~--------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ 448 (521)
+. .+ . ..+.+..++..+..+.............+|+++|+.
T Consensus 408 ~~~y~~~~~~~~~~~~~~~Cn~~~~~~~~~a~~G~C~~~C~~~~~~Fl~~~~~~~~~~~~~~~p~~~i~LR~V~~~~rs~ 487 (539)
T PF03137_consen 408 TVPYHNSTSSSPSCNLTCSCNSCCSSGNGSATPGKCPSDCCNKLIPFLILLFILSFFTFMSQVPSTLITLRCVPPEQRSF 487 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cCccccccCCCCCCCCCCCCCCccCCCcccccCCCcCcccccccHHHHHHHHHHHHHHHhcccchheeeeccCChhhcch
Confidence 00 00 0 122233333344444455566667778899999999
Q ss_pred hhHHHHHhh-hhhhhHHHHHHHh
Q 039541 449 TTSLVRQAV-NLGAAFSPVLISA 470 (521)
Q Consensus 449 ~~~~~~~~~-~~g~~~~p~~~~~ 470 (521)
+.|+...+. -+|.+-+|++.|.
T Consensus 488 AlGv~~~~~rllg~IPgPIifG~ 510 (539)
T PF03137_consen 488 ALGVQWLIIRLLGFIPGPIIFGA 510 (539)
T ss_dssp -----------------------
T ss_pred hhhHHHHHHHhhcCcchHHHHhH
Confidence 999998776 4577788999886
No 118
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=99.61 E-value=1.8e-13 Score=130.07 Aligned_cols=379 Identities=13% Similarity=0.039 Sum_probs=230.0
Q ss_pred ceeeecceeeCCccccchhhHHHHHHHHHHhhhhhhhccccCCCCchHHHHHHHHHHHHHHHHHhccc--cHHHHHHHHH
Q 039541 103 TIISDWSLECAGSSILSGLPSSCFFIGCLLGGLALSTLGDSSSLGRKKLLFLSCFAMSITALATIFAN--NIWIYSTIRF 180 (521)
Q Consensus 103 ~i~~~~~~~~~~~~~~~~~~~s~~~lg~~i~~~~~g~l~dr~~~Grr~~l~~~~~~~~~~~~~~~~~~--~~~~l~~~r~ 180 (521)
+..+.+|++++++ .-+.++|.--.-+..+++|+++|| -.|+|+++..|.++.++|.++.+.+. +...++++-+
T Consensus 51 ~~~~gLg~~~~~A----~~l~~~y~slVY~t~i~GG~laDr-~LG~~~tI~lGail~~iGh~~L~~~~~~~~~gl~i~L~ 125 (498)
T COG3104 51 QLGDGLGFDETHA----TGLFSAYGSLVYLTPIIGGWLADR-VLGTRRTIVLGAILMAIGHLVLAISSVSGPGGLYIGLA 125 (498)
T ss_pred hccccCCcChHhh----HHHHHHHHHHHHHHHHHHHHHHHH-hcchhHHHHHHHHHHHHHHHHHhccccccccHHHHHHH
Confidence 3444467888776 556666665556778899999999 66999999999999999999999984 7889999999
Q ss_pred HhhccchhhHhhhhhheeeeecCc--chhHHHHHHHHHHHHHHHHHHHH-HHhhcCCchhHHHHHHHHHHHHHHhhhcee
Q 039541 181 VAGFFRAPIMTSVIVLLSEMVSKR--WRGQVVIIGFTFFSFGLVSLPAV-AYLSRGSSWKMLYVWTSIPSIVCCIIIYPF 257 (521)
Q Consensus 181 l~G~~~g~~~~~~~~~i~~~~~~~--~rg~~~~~~~~~~~~G~~i~~~i-~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~ 257 (521)
+.++|.|..=+...+++.|.+|++ +|-..++++.++.++|.+++|++ +++.+..||+..|.+.++-..+.+ +.+..
T Consensus 126 ~I~iG~Gl~K~NiS~llg~ly~~~DprrD~gFt~fY~~iNiGsl~~p~i~~~~~~~~g~~~gF~~aavGm~~gl-~~f~~ 204 (498)
T COG3104 126 LIIVGTGLFKPNISSLLGELYPKDDPRRDGGFTLFYMGINIGSLIAPIITGLLAINYGWHVGFGLAAVGMIIGL-VIFLL 204 (498)
T ss_pred HHHhccccccccHHHHHHHhcCCCCcccCCCccEEEEEeehHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHH-HHHHH
Confidence 999999999999999999999764 47778889999999999999999 888899999999999888777766 33333
Q ss_pred eec----ch-----hHHHhcCCHHHHHHHHHHHhhhcCCCCCCCccccccCCCCCccccCCCcccccccHHHHhcc----
Q 039541 258 ISE----SP-----RWLFIHGHEAEAMAVLKRLASRSNYQSDYGLESCCLSNMPPKAKNVIPKLDLYSSLKDLFNR---- 324 (521)
Q Consensus 258 ~~e----sp-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~---- 324 (521)
.+. ++ ..+..+............+.. ..-. .....+........ ..-.....-+.+.+++
T Consensus 205 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-----~~l~~~~~~~~~~~-~~i~~~~~~~~~~~~~~~~~ 277 (498)
T COG3104 205 GRRHVKGIGGVPDPNPLSFNFLLPVLGGLVVMILA-ALLT-----LLLNQNTFSGVLLV-ISILIAIIYFAEAFRSPKVF 277 (498)
T ss_pred ccchhcCCCCCCCccchhhhhhhhhHHHHHHHHHH-HHHH-----HHHHHHHHHHHHHH-HHHHHHHHHHHHHhccCccH
Confidence 321 11 100000000000000000000 0000 00000000000000 0000000000000000
Q ss_pred ---HHH---HHHHHHHHHHHHHH-----HHHHHhHHhhccC-CC--ccHHHHHHHHHHHhHhHHHHHHHHHhhcCCc---
Q 039541 325 ---KWA---LRRLLTIMALAFGI-----GVVYFGLLLGVGN-LS--FNIYLSLAFNGLLDIPAYLLTFILIERWSRK--- 387 (521)
Q Consensus 325 ---~~~---~~~~~~~~~~~~~~-----~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~--- 387 (521)
++. ...++...++|... ....|.....-.+ .| .++.....+..+.-++.+++..++..|.+++
T Consensus 278 ~er~r~~~~~~Lfl~~~iFW~~~~Q~~ssl~~~a~~~v~~~~~g~~vp~~~fQslNp~~Iii~~pI~a~l~~~l~~~~~~ 357 (498)
T COG3104 278 DERRRLLAAIPLFLFAVIFWALYEQMGSSLNLYADRNVNRQIFGFEVPPAWFQSLNPFFIILFSPILAALWTKLGRGNKQ 357 (498)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHhhcccccceecCHHHHHhhCHHHHHHHHHHHHHHHhHhhcCCCC
Confidence 111 11122222333322 2222322222222 22 3455666677777777777777777775443
Q ss_pred ----hHHHHHHHHHHHHHHHHHhc----C---C-chHHHHHHHHHHHHHHHHHHHHHHHHhhccccCchhhhhhhHHHHH
Q 039541 388 ----SSILTFCILSGTCSAICVAI----G---D-EQEVLQIGLELASFFSACVAFNVLLVFGTELFTTCVRNSTTSLVRQ 455 (521)
Q Consensus 388 ----~~~~~~~~~~~i~~~~~~~~----~---~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 455 (521)
.-+.++..+++.+.+++... . . .+.++.+...++..++.-...|+...++....|+...+..++....
T Consensus 358 ps~~~KFalGl~l~g~~fl~l~~~~~~~~~~~~~~s~~~lil~y~l~s~gEL~iSpvGLs~~t~laP~~~~s~~ma~wfL 437 (498)
T COG3104 358 PSTPIKFALGLILAGLGFLILLLAGIWFGGPSGLVSVWWLVLSYVLQSFGELFISPVGLSMVTKLAPPALKSFIMAMWFL 437 (498)
T ss_pred CCcchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcCHHHHHHHHHHHHHHHHHhCHHHHHHHHHhChHHHHHHHHHHHHH
Confidence 23455566666665555443 1 1 1227788888999999999999999999999999999999988877
Q ss_pred hhhhhhhHHHHHHHh--------hccchhHHHHHHHHHHHHHhHhhh
Q 039541 456 AVNLGAAFSPVLISA--------GRQNEFLSFGVFGLVVFCFGFFVV 494 (521)
Q Consensus 456 ~~~~g~~~~p~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~ 494 (521)
....|..++..+.+. ........|..++...++..+..+
T Consensus 438 t~a~~~~l~g~va~~~~~~~~~~~~~~~~~~F~~~g~v~i~~~~~~~ 484 (498)
T COG3104 438 TVAAGQTLGGQVAGLTAVTDPAYTAFIEGRVFGTIGVVAIVIGILLL 484 (498)
T ss_pred HHHHHHHhhceecccccccchhhhhhhhhhhHHHHHHHHHHHHHHHH
Confidence 777777666655541 223345566666666665554433
No 119
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.60 E-value=3.5e-15 Score=123.67 Aligned_cols=138 Identities=20% Similarity=0.321 Sum_probs=123.5
Q ss_pred hhHHHHHHHHHHhhhhhhhccccCCCCchHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHhhccchhhHhhhhhheeee
Q 039541 121 LPSSCFFIGCLLGGLALSTLGDSSSLGRKKLLFLSCFAMSITALATIFANNIWIYSTIRFVAGFFRAPIMTSVIVLLSEM 200 (521)
Q Consensus 121 ~~~s~~~lg~~i~~~~~g~l~dr~~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~ 200 (521)
++.+.+.++..+++++.|++.|| +|||+.+..+..+..++.+...+.++++.+.+.+++.|++.+...+....++.|.
T Consensus 2 ~~~~~~~~~~~~~~~~~g~~~d~--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 79 (141)
T TIGR00880 2 LLLAGYALGQLIYSPLSGLLTDR--FGRKPVLLVGLFIFVLSTAMFALSSNITVLIIARFLQGFGAAFALVAGAALIADI 79 (141)
T ss_pred EEEEeehhHHHHHHhhHHHHHhh--cchhHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhHHHHHHHH
Confidence 34456678899999999999999 9999999999999999999999999999999999999999999999999999999
Q ss_pred ecCcchhHHHHHHHHHHHHHHHHHHHH-HHhhcCCchhHHHHHHHHHHHHHHhhhceeeec
Q 039541 201 VSKRWRGQVVIIGFTFFSFGLVSLPAV-AYLSRGSSWKMLYVWTSIPSIVCCIIIYPFISE 260 (521)
Q Consensus 201 ~~~~~rg~~~~~~~~~~~~G~~i~~~i-~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~~~e 260 (521)
+|+++|+++.++.+....+|..+++.+ +.+.+..+|++.+++.++..++..+..++..||
T Consensus 80 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (141)
T TIGR00880 80 YPPEERGVALGLMSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLAILALAAFILLAFLLPE 140 (141)
T ss_pred CChhhhhHHHHHHHHhHHHHHHHhHHhHHHHhcccchHHHHHHHHHHHHHHHHHHhhcCCC
Confidence 999999999999999999999999988 667777899999999888877777566555555
No 120
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.60 E-value=6.1e-15 Score=148.98 Aligned_cols=171 Identities=16% Similarity=0.151 Sum_probs=128.8
Q ss_pred eeeecceeeCCccccchhhHHHHHHHHHHhhhhhhhccccCCCCchHHHHHHHHHHHHHHHH---HhccccHHHHHHHHH
Q 039541 104 IISDWSLECAGSSILSGLPSSCFFIGCLLGGLALSTLGDSSSLGRKKLLFLSCFAMSITALA---TIFANNIWIYSTIRF 180 (521)
Q Consensus 104 i~~~~~~~~~~~~~~~~~~~s~~~lg~~i~~~~~g~l~dr~~~Grr~~l~~~~~~~~~~~~~---~~~~~~~~~l~~~r~ 180 (521)
+++++|.+..+. ++..+...++..++.++.|+++|| +|||+++..+.++..++.+. ...+++...++++|+
T Consensus 277 l~~~~g~s~~~~----~~~~~~~~~~~~~~~~~~g~l~dr--~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (490)
T PRK10642 277 LSHNLHYSEDHG----VLIIIAIMIGMLFVQPVMGLLSDR--FGRRPFVILGSVALFVLAIPAFILINSNVIGLIFAGLL 350 (490)
T ss_pred HHHhcCCCHHHH----HHHHHHHHHHHHHHHHHHHHHHHH--hccHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHH
Confidence 345677776544 777788889999999999999999 99999988877654433322 233456788889999
Q ss_pred HhhccchhhHhhhhhheeeeecCcchhHHHHHHHHHHHHHHHHHHHH-HHhhcCC-chhHHHHHHHHHHHHHHhhhceee
Q 039541 181 VAGFFRAPIMTSVIVLLSEMVSKRWRGQVVIIGFTFFSFGLVSLPAV-AYLSRGS-SWKMLYVWTSIPSIVCCIIIYPFI 258 (521)
Q Consensus 181 l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~i~~~i-~~~~~~~-~wr~~f~~~~~~~~~~~~~~~~~~ 258 (521)
+.|++.+........++.|.+|++.|++++++......++..++|.+ +++.+.. +|+.++++..+++++.+ +..+++
T Consensus 351 ~~g~~~~~~~g~~~~~~~~~~p~~~Rg~~~g~~~~~~~~~g~~~p~i~g~l~~~~~~~~~~~~~~~~~~~i~~-~~~~~~ 429 (490)
T PRK10642 351 MLAVILNCFTGVMASTLPAMFPTHIRYSALAAAFNISVLVAGLTPTLAAWLVESTQNLMMPAYYLMVVAVIGL-ITGVTM 429 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHH-HHHHHh
Confidence 99988877777778888899999999999997444444445566666 7766543 57887777777776666 455667
Q ss_pred ecchhHHHhc-----CCHHHHHHHHHHH
Q 039541 259 SESPRWLFIH-----GHEAEAMAVLKRL 281 (521)
Q Consensus 259 ~esp~~~~~~-----~~~~~~~~~~~~~ 281 (521)
||+|+++.++ ++.+|+++.++++
T Consensus 430 pes~~~~~~~~~~~~~~~~~a~~~l~~~ 457 (490)
T PRK10642 430 KETANRPLKGATPAASDIQEAKEILVEH 457 (490)
T ss_pred ccccCCCCCCccccccchhhHHHHhhcc
Confidence 9999987754 7888888888776
No 121
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.55 E-value=3.3e-13 Score=135.12 Aligned_cols=346 Identities=14% Similarity=0.117 Sum_probs=232.4
Q ss_pred CcceeeecceeeCCccccchhhHHHHHHHHHHhhhhhhhccccCCCCchHHHHHHHHHHHHHHHHHhccc----------
Q 039541 101 DTTIISDWSLECAGSSILSGLPSSCFFIGCLLGGLALSTLGDSSSLGRKKLLFLSCFAMSITALATIFAN---------- 170 (521)
Q Consensus 101 ~~~i~~~~~~~~~~~~~~~~~~~s~~~lg~~i~~~~~g~l~dr~~~Grr~~l~~~~~~~~~~~~~~~~~~---------- 170 (521)
+..|++.|+++.++. |++.+.+-++..+...+..+..-| .-|-+.+-+|+++++++++++++-+
T Consensus 120 IttiErRF~i~Ss~s----G~I~s~~dig~~l~i~fVsYfG~r--~HrPr~Ig~G~~~m~lgsll~alPHf~~~~y~~~~ 193 (735)
T KOG3626|consen 120 ITTIERRFKISSSQS----GLIASSYDIGNLLLIIFVSYFGSR--GHRPRWIGIGLVLMGLGSLLFALPHFFSGPYEYEL 193 (735)
T ss_pred hhhhhhhcCCCCCcc----eeEeeecccchhhhhHhHHHhccc--cCccceeeechhHHHHHHHHHhChHHhcCcchhhh
Confidence 889999999999777 999999999999999999999999 8888889999999999999987720
Q ss_pred ---------------------------------------c--HH-HHHHHHHHhhccchhhHhhhhhheeeeecCcchhH
Q 039541 171 ---------------------------------------N--IW-IYSTIRFVAGFFRAPIMTSVIVLLSEMVSKRWRGQ 208 (521)
Q Consensus 171 ---------------------------------------~--~~-~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~rg~ 208 (521)
+ ++ +++++.++.|+|....++...+|+-|...+++-..
T Consensus 194 ~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi~tlGisYiDDnvk~~~Spl 273 (735)
T KOG3626|consen 194 EVIKQSVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATPIFTLGISYIDDNVKKKNSPL 273 (735)
T ss_pred hhhhccccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCCCccCCCccccccccccCCcH
Confidence 0 23 67788999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhc----C----------------CchhHHHHHHHHHHHHHHhhhceeeecchhHHHhc
Q 039541 209 VVIIGFTFFSFGLVSLPAVAYLSR----G----------------SSWKMLYVWTSIPSIVCCIIIYPFISESPRWLFIH 268 (521)
Q Consensus 209 ~~~~~~~~~~~G~~i~~~i~~~~~----~----------------~~wr~~f~~~~~~~~~~~~~~~~~~~esp~~~~~~ 268 (521)
.+|++.....+|.++|.++|.+.. + ..|+.-|++.+.+.++.. +.++++|..... .
T Consensus 274 Ylgi~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGFLi~g~~~~~~a-~p~f~fPk~lp~---~ 349 (735)
T KOG3626|consen 274 YLGILYSMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGFLICGALLLFSA-VPLFFFPKELPK---S 349 (735)
T ss_pred HHHHHHHHHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHH-HHHHhCcccCcc---c
Confidence 999999999999999998864421 0 137777888888888888 555666654321 0
Q ss_pred CCHHHHHHHHHHHhhhcCCCCCCCccccccCCCCCccccCCCcccccccHHHHhccHHHHHHHHHHHHHHHHHHHHHHhH
Q 039541 269 GHEAEAMAVLKRLASRSNYQSDYGLESCCLSNMPPKAKNVIPKLDLYSSLKDLFNRKWALRRLLTIMALAFGIGVVYFGL 348 (521)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 348 (521)
.+..++ ++. + .... +....+...+..++-++....++.+++||.+...++...+-...+.....++
T Consensus 350 ~~~~~~----~~~-~-~~k~--------~~~~~~~~~~~~~~ikdfp~s~~~ll~N~if~~~~l~~~~~~~~~~G~~tFl 415 (735)
T KOG3626|consen 350 QKRKRA----RDL-H-VLKT--------ESGGAKSDKTFGKKIKDFPKSIKRLLSNPIFMLVVLASVIESLAITGYITFL 415 (735)
T ss_pred cccchh----hhh-c-cccc--------ccccccCCcchhhhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHhhHHHhh
Confidence 000000 000 0 0000 0000000011111122344578889999987666666666555555555555
Q ss_pred Hhhcc-CCCccHHHHHHHHHH----HhHhHHHHHHHHHhhcCC--chHHHHHHHHHHHHH---HHHHhcC----------
Q 039541 349 LLGVG-NLSFNIYLSLAFNGL----LDIPAYLLTFILIERWSR--KSSILTFCILSGTCS---AICVAIG---------- 408 (521)
Q Consensus 349 ~~~~~-~~~~~~~~~~~~~~~----~~~~~~~~~g~l~dr~g~--~~~~~~~~~~~~i~~---~~~~~~~---------- 408 (521)
|-+++ +++.+.+.+..+.+. +..+|.+++|++++|+.- |....+..+...+.+ +...+..
T Consensus 416 PKyLE~Qfg~sas~An~l~G~i~vp~~~~Gi~lGG~iikkfkl~~r~~a~~~~~~~~l~l~~~~~~~~igC~~~~~aG~~ 495 (735)
T KOG3626|consen 416 PKYLETQFGISASLANILTGSIGVPAAAVGIFLGGLIIKKFKLSARGAAKFVIVCSVLSLLFYSLLFFIGCESSPVAGVT 495 (735)
T ss_pred HHHHHHHcCCCHHHHHHHhhhhhhhhhhhhhhccceeeeeecccHHHHHHHHHHHHHHHHHHHHHHHEecCCCCccccee
Confidence 65554 467766655554443 334677889999999753 333333333333332 2222220
Q ss_pred ------------C-----------------------------------------c-------------h-----------
Q 039541 409 ------------D-----------------------------------------E-------------Q----------- 411 (521)
Q Consensus 409 ------------~-----------------------------------------~-------------~----------- 411 (521)
. . .
T Consensus 496 ~~y~~~~~~~~~~~~~s~Cn~~C~C~~~~~~PVCg~~G~tY~SpChAGC~~~~~~~~~~~~ytnCsCv~~~~~~~~~a~~ 575 (735)
T KOG3626|consen 496 NSYEGSPAFTSHENPFSSCNSDCSCDTSEYEPVCGENGITYFSPCHAGCTESSGTSDGNTIYTNCSCVPTNKNGNGSAKK 575 (735)
T ss_pred cCCCCCCccccCCCchhhhhcCCCCCCcCcCcccCCCCCEEeChhhhCCcccccCCCCceeeccccccccccCCCceeec
Confidence 0 0 0
Q ss_pred -------H---HHHHHHHHHHHHHHHHHHHHHHHhhccccCchhhhhhhHHHHHhh-hhhhhHHHHHHHh
Q 039541 412 -------E---VLQIGLELASFFSACVAFNVLLVFGTELFTTCVRNSTTSLVRQAV-NLGAAFSPVLISA 470 (521)
Q Consensus 412 -------~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~-~~g~~~~p~~~~~ 470 (521)
. ..+++.+++..|..+......+.++...+|+|+|..++|+..++. -+|.+-+|++.|+
T Consensus 576 G~C~~~c~~~~~~Fl~~~~~~sf~~~~~~~p~~~i~LR~V~~e~ks~AlG~~~~~irllg~IPsPIifG~ 645 (735)
T KOG3626|consen 576 GYCPNDCCRQFLIFLALFAIGSFIGALGAVPGMLIVLRCVPPEEKSFALGFQWMLIRLLGFIPSPIIFGA 645 (735)
T ss_pred CCCCCCcchhhHHHHHHHHHHHHHHHhccCcceEEEEEccCchhchhhhHHHHHHHHHHhcCCchHhhhh
Confidence 0 123334444444445555677778889999999999999998876 5577788888874
No 122
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=99.51 E-value=1.1e-11 Score=121.06 Aligned_cols=306 Identities=19% Similarity=0.234 Sum_probs=201.7
Q ss_pred HHHHHHHHhhhhhhhccccCCCCchHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHhhccc--hhhHhhhhhheeeeec
Q 039541 125 CFFIGCLLGGLALSTLGDSSSLGRKKLLFLSCFAMSITALATIFANNIWIYSTIRFVAGFFR--APIMTSVIVLLSEMVS 202 (521)
Q Consensus 125 ~~~lg~~i~~~~~g~l~dr~~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~--g~~~~~~~~~i~~~~~ 202 (521)
...+...+.++..|.++|| +|||..+.+.+....+..+...+.. +|.++ +.|+.. +.......++++|...
T Consensus 70 ~~~~~~~i~s~~iG~lSD~--~grk~~L~~~~~~~~l~~~~~~~~~-~~~~~----~~~l~g~~~~~~s~~~a~vadis~ 142 (463)
T KOG2816|consen 70 TAGLLTLISSPLIGALSDR--YGRKVVLLLPLFGTILPALCLLFQG-YWFFL----LLGLSGGFSAIFSVGFAYVADISS 142 (463)
T ss_pred hhHHHHHHHHhhhHHhhhh--hhhhhhHHHHHHHHHHhHHHHHHHH-HHHhh----hcccccchhhhhhhhhhheeeccc
Confidence 3467778899999999999 9999999999998888888877766 44333 445433 3456677889999999
Q ss_pred CcchhHHHHHHHHHHHHHHHHHHHH-HHhhcCCchhHHHHHHHHHHHHHHhhhceeeecchhHHHhcCCHHHHHHHHHHH
Q 039541 203 KRWRGQVVIIGFTFFSFGLVSLPAV-AYLSRGSSWKMLYVWTSIPSIVCCIIIYPFISESPRWLFIHGHEAEAMAVLKRL 281 (521)
Q Consensus 203 ~~~rg~~~~~~~~~~~~G~~i~~~i-~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~~~esp~~~~~~~~~~~~~~~~~~~ 281 (521)
.++|....|+....+..+..++|.+ +......|.-.+|.+..+..++..+..++++||+-... +.++ ...+.
T Consensus 143 ~~~R~~~~gll~~~~~~~~~~~p~~~~~~~~~~~~a~~f~ia~~~~~~~~~y~~~~l~Esl~~~----~~~~--~~~~~- 215 (463)
T KOG2816|consen 143 EEERSSSIGLLSGTFGAGLVIGPALGGYLVKFLGIALVFLIAAASGILSLLYMLLFLPESLQEK----ERSD--ATLRE- 215 (463)
T ss_pred hhHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhhccccccCcc----cccc--ccccc-
Confidence 9999999999999999999999999 67777788999999999999999889999999974210 0000 00000
Q ss_pred hhhcCCCCCCCccccccCCCCCccccCCCcccccccHHHHhccHHHHHHHHHHHHHHHHHHHHH----H-hHHhhcc-CC
Q 039541 282 ASRSNYQSDYGLESCCLSNMPPKAKNVIPKLDLYSSLKDLFNRKWALRRLLTIMALAFGIGVVY----F-GLLLGVG-NL 355 (521)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~----~-~~~~~~~-~~ 355 (521)
........... ...++...+ .+-.+..+......+.....- . ..++++. .+
T Consensus 216 -------------------~~~~~~~~~~~---~~~~~~~~~-~~~~r~~l~l~l~~~~~~~~~~~~~~~~~~~yl~~~f 272 (463)
T KOG2816|consen 216 -------------------LTPGSLDSSHV---ADAFQSLTK-VGPDRLLLLLLLVAFLSSLPEAGGASDVLLLYLKAKF 272 (463)
T ss_pred -------------------cCCCcccchhh---hhhhhhhcc-cCCCccchHHHHHHHHHHHHHhcCceeEEEEEEeeec
Confidence 00000000000 001111111 100111121111111111111 0 1122222 23
Q ss_pred CccHHH---HHHHHHHHhHhHHHHHH-HHHhhcCCchHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHH
Q 039541 356 SFNIYL---SLAFNGLLDIPAYLLTF-ILIERWSRKSSILTFCILSGTCSAICVAIGDEQEVLQIGLELASFFSACVAFN 431 (521)
Q Consensus 356 ~~~~~~---~~~~~~~~~~~~~~~~g-~l~dr~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 431 (521)
+.+... .....+....++.++.. .+...++.|++...|.....+....+.+.... |..+ ...+.........+
T Consensus 273 ~w~~~~~s~~~~~~~~~~~i~~l~~~~~l~~~l~~~~~i~lGl~~~~~~~~~~af~~~~--w~~~-~~~v~~~~~~~~~p 349 (463)
T KOG2816|consen 273 GWNKKEFSDLLSLVSILGIISQLLLLPLLSSILGEKRLISLGLLSEFLQLLLFAFATET--WMMF-AAGVVVALAGIVFP 349 (463)
T ss_pred CcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhhHHHHHHHHHHHHHHHhccc--hhhh-HHHHHHHhhcchhH
Confidence 444332 23344455555665554 77888898898899999889988888887665 3433 33344445567778
Q ss_pred HHHHhhccccCchhhhhhhHHHHHhhhhhhhHHHHHHHh
Q 039541 432 VLLVFGTELFTTCVRNSTTSLVRQAVNLGAAFSPVLISA 470 (521)
Q Consensus 432 ~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~ 470 (521)
...+..+...+++.+|++.++...+..+.+.++|.+.+.
T Consensus 350 a~~s~~s~~v~~~e~g~v~~~is~i~~l~~~~~~~~~~~ 388 (463)
T KOG2816|consen 350 AIRAFASILVSPEEQGKVFGIISGIEGLSGVVSPALYGN 388 (463)
T ss_pred HHHhHHHhhcccccccchhhHHHHHHHHhhhhhHHHHHH
Confidence 889999999999999999999999999999999998863
No 123
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.48 E-value=1.2e-13 Score=137.15 Aligned_cols=142 Identities=15% Similarity=0.110 Sum_probs=123.8
Q ss_pred chhhHHHHHHHHHHhhhhhhhccccCCCCchHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHhhccchhhHhhhhhhee
Q 039541 119 SGLPSSCFFIGCLLGGLALSTLGDSSSLGRKKLLFLSCFAMSITALATIFANNIWIYSTIRFVAGFFRAPIMTSVIVLLS 198 (521)
Q Consensus 119 ~~~~~s~~~lg~~i~~~~~g~l~dr~~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~ 198 (521)
.|++.++..++..++.+++|++.|| +|||+.+..+.++.+++.++.+++++.+.+++.+++.|++.+...+....++.
T Consensus 264 ~g~~~~~~~~~~~~~~~~~g~l~dr--~g~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~ 341 (420)
T PRK09528 264 FGYLNSFQVFLEALIMFFAPFIINR--IGAKNALLLAGTIMAVRIIGSGFATGPLEVSILKLLHAFEVPFLLVGVFKYIT 341 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH--hCcchhhHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4899999999999999999999999 99999999999999999999999999999999999999999888888889999
Q ss_pred eeecCcchhHHHHH-HHHHHHHHHHHHHHH-HHhhcCCchhHHHHHHHHHHHHHHhhhceeeecch
Q 039541 199 EMVSKRWRGQVVII-GFTFFSFGLVSLPAV-AYLSRGSSWKMLYVWTSIPSIVCCIIIYPFISESP 262 (521)
Q Consensus 199 ~~~~~~~rg~~~~~-~~~~~~~G~~i~~~i-~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~~~esp 262 (521)
|.+|++.|+...+. ++....+|.++++.+ |++.+..||+..|.+.+++.++..++.++.+++.|
T Consensus 342 ~~~~~~~~a~~~~~~~~~~~~lg~~ig~~~~G~l~~~~G~~~~f~~~~~~~~i~~~~~~~~~~~~~ 407 (420)
T PRK09528 342 LNFDVRLSATIYLVGFQFAKQLGAVFLSTLAGNLYDSIGFQGTYLILGGIVLLFTLISVFTLSGDR 407 (420)
T ss_pred HHcCccceeeeeeehHHHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence 99999999887655 677788999999888 88888889999999988887776645555555543
No 124
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.47 E-value=2.4e-13 Score=140.55 Aligned_cols=139 Identities=13% Similarity=0.034 Sum_probs=120.9
Q ss_pred hhhHHHHHHHHHHhhhhhhhccccCCCCchHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHhhccchhhHhhhhhheee
Q 039541 120 GLPSSCFFIGCLLGGLALSTLGDSSSLGRKKLLFLSCFAMSITALATIFANNIWIYSTIRFVAGFFRAPIMTSVIVLLSE 199 (521)
Q Consensus 120 ~~~~s~~~lg~~i~~~~~g~l~dr~~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~ 199 (521)
.+...+..++.+++.++.|+++|| +|||+++++++++.++++++.+++++...+++.+++.|++.++.++...++++|
T Consensus 598 ~~~~~l~~l~~i~G~il~g~L~Dr--~GRr~~l~~~~~lsai~~ll~~~~~s~~~ll~~~~l~g~~~~~~~~~~~a~~aE 675 (742)
T TIGR01299 598 YFVNFLGTLAVLPGNIVSALLMDK--IGRLRMLAGSMVLSCISCFFLSFGNSESAMIALLCLFGGLSIAAWNALDVLTVE 675 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH--hCCHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455667778999999999999999 999999999999999999999999998888999999999888899999999999
Q ss_pred eecCcchhHHHHHHHHHHHHHHHHHHHHH-HhhcCCchhHHHHHHHHHHHHHHhhhceeeecch
Q 039541 200 MVSKRWRGQVVIIGFTFFSFGLVSLPAVA-YLSRGSSWKMLYVWTSIPSIVCCIIIYPFISESP 262 (521)
Q Consensus 200 ~~~~~~rg~~~~~~~~~~~~G~~i~~~i~-~~~~~~~wr~~f~~~~~~~~~~~~~~~~~~~esp 262 (521)
++|.++|++++|+..+...+|.+++|+++ .+.. .+...+|++.+++.++.. ++.+++||+.
T Consensus 676 l~Pt~~Rgta~Gi~~~~~rlGaiigp~i~g~L~~-~~~~~pf~i~a~~lll~~-ll~~~LPET~ 737 (742)
T TIGR01299 676 LYPSDKRATAFGFLNALCKAAAVLGILIFGSFVG-ITKAAPILFASAALACGG-LLALKLPDTR 737 (742)
T ss_pred HcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hhhHHHHHHHHHHHHHHH-HHHHhCCCCc
Confidence 99999999999999999999999999994 4544 345678888877777766 4555678874
No 125
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=99.47 E-value=2.8e-12 Score=126.31 Aligned_cols=369 Identities=15% Similarity=0.120 Sum_probs=218.2
Q ss_pred CcceeeecceeeCCccccchhhHHHHHHHHHHhhhhhhhccccC---CCCchHHHHHHHHHHHHHHHHHhcc----ccHH
Q 039541 101 DTTIISDWSLECAGSSILSGLPSSCFFIGCLLGGLALSTLGDSS---SLGRKKLLFLSCFAMSITALATIFA----NNIW 173 (521)
Q Consensus 101 ~~~i~~~~~~~~~~~~~~~~~~~s~~~lg~~i~~~~~g~l~dr~---~~Grr~~l~~~~~~~~~~~~~~~~~----~~~~ 173 (521)
.|.+++++|+++++. ....+...+...+ -++.|.++|.- .+.||+-++++.++..++.+..+.. .+..
T Consensus 13 ~~~l~~~l~ls~~~~----~~~~~~~~lPw~~-Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~~~~~s~~ 87 (433)
T PF03092_consen 13 YPFLKDDLGLSPAQL----QRLSSLASLPWSI-KPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLPASESSAA 87 (433)
T ss_pred HHHHHHHcCCCHHHH----HHHHHHHhCchHH-hhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhcccccchhh
Confidence 567889999999666 6666666666654 47899999982 1236666677777776666655543 3566
Q ss_pred HHHHHHHHhhccchhhHhhhhhheeeeec--CcchhHHHHHHHHHHHHHHHHHHHH-HHhhcCCchhHHHHHHHHHHHHH
Q 039541 174 IYSTIRFVAGFFRAPIMTSVIVLLSEMVS--KRWRGQVVIIGFTFFSFGLVSLPAV-AYLSRGSSWKMLYVWTSIPSIVC 250 (521)
Q Consensus 174 ~l~~~r~l~G~~~g~~~~~~~~~i~~~~~--~~~rg~~~~~~~~~~~~G~~i~~~i-~~~~~~~~wr~~f~~~~~~~~~~ 250 (521)
...+.-++..+|......+.-+++.|... ++.||...+.......+|.+++..+ |.+.+..++|..|.+.+++.++.
T Consensus 88 ~~~~~l~la~~g~a~~DV~aDa~vvE~~~~~p~~~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~~~~~~f~i~~~~~~l~ 167 (433)
T PF03092_consen 88 IAVVLLFLASFGYAFADVAADALVVELARREPESRGDLQSFVWGVRSVGSLVGSLLSGPLLDSFGPQGVFLISAALPLLM 167 (433)
T ss_pred hHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhcCCCeEEehHHHHHHHHH
Confidence 77777788899999999999999999883 3447888888888899999999888 78888889999999988887777
Q ss_pred HhhhceeeecchhHHHhcCCHHHHHHHHHHHhhhcCCCCCCCccccccCCCCCccccCCCcccccccHHHHhccHHHHHH
Q 039541 251 CIIIYPFISESPRWLFIHGHEAEAMAVLKRLASRSNYQSDYGLESCCLSNMPPKAKNVIPKLDLYSSLKDLFNRKWALRR 330 (521)
Q Consensus 251 ~~~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 330 (521)
.+...+..+|.++ ...++... . .+. ........-++.....++.++.+..+..
T Consensus 168 ~~~~~~~~~e~~~-----~~~~~~~~----~---~~~---------------~~~~~~~~~~~~~~~l~~~~~~~~i~~~ 220 (433)
T PF03092_consen 168 LIVALFLLEERKV-----RPADEVFS----F---GKE---------------EVPCLFGSFREQLSELWRALQQRAIWQP 220 (433)
T ss_pred HHHHHHhhhhccc-----cccchhhc----c---ccc---------------ccchhhHHHHHHHHHHHHHHhhhHHHHH
Confidence 6455555554211 00000000 0 000 0000000001111356677777776665
Q ss_pred HH-HHHHHHHHHHH----HHHhHHhhccCCCccHHHHH---HHHHHHhHhHHHHHHHHHhhcCCchHHHHHHHHHHHHHH
Q 039541 331 LL-TIMALAFGIGV----VYFGLLLGVGNLSFNIYLSL---AFNGLLDIPAYLLTFILIERWSRKSSILTFCILSGTCSA 402 (521)
Q Consensus 331 ~~-~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~i~~~ 402 (521)
.+ ..++..+.... .+|.........+.+..... .+..++.++|..+......+..-|+++....++..+..+
T Consensus 221 ~~~~~~~~~~~~~~~~a~~fy~~~~~~~gp~fs~~f~~~~~~vg~~~~l~g~~~y~~~~~~~~~R~~~~~t~~~~~~~~l 300 (433)
T PF03092_consen 221 ILFFIFFFNLPPSISSASSFYFQTDALGGPHFSPSFYGTLSIVGSIASLLGILLYRKYFSNWSWRRIFVVTTLVSVLASL 300 (433)
T ss_pred HHHHHHHHHhccCCCCccEEEEEeccccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHhc
Confidence 55 22221111100 11111111111113433322 334445555555555555556666776666665554433
Q ss_pred HHHhc-CCch-------HHHHHHHHHHHHHHHHHHHHHHHHhhccccCchhhhhhhHHHHHhhhhhhhHHHHHHHh----
Q 039541 403 ICVAI-GDEQ-------EVLQIGLELASFFSACVAFNVLLVFGTELFTTCVRNSTTSLVRQAVNLGAAFSPVLISA---- 470 (521)
Q Consensus 403 ~~~~~-~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~---- 470 (521)
.-... ...+ .+....-.++..+.....+-....+++|+.|+..-|+.+++...+.++|..++..+...
T Consensus 301 ~~~~lv~~~n~~~Gi~d~~f~lgd~~l~~~~~~i~~mP~lvl~a~lcP~G~Egt~yall~s~~Nlg~~~s~~lg~~l~~~ 380 (433)
T PF03092_consen 301 FDLLLVTRWNLDLGIPDQWFALGDTILEEVIGMIAFMPSLVLAARLCPKGSEGTVYALLASFSNLGSSVSSTLGAFLMEL 380 (433)
T ss_pred ccEEEEEEEeeeeCcCCeEEEEEhHHHHHHHHHHHHHHHHHHHHHHCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22111 1110 02223344555566666667778889999999999999999999999988877766642
Q ss_pred ---hc---cchhHHHHHHHHHHHHHhHhhhccccCCC
Q 039541 471 ---GR---QNEFLSFGVFGLVVFCFGFFVVFLPETIG 501 (521)
Q Consensus 471 ---~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 501 (521)
.. .+.....++..++.++...+..++|+.++
T Consensus 381 ~~vt~~~f~~l~~lili~~~~~ll~l~ll~lLp~~~~ 417 (433)
T PF03092_consen 381 FGVTRDDFSNLWLLILICSVIQLLPLPLLFLLPPQKR 417 (433)
T ss_pred cCCCcccccchHHHHHHHHHHHHHHHHHHHHcCCCch
Confidence 11 12334444455555555555556665443
No 126
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.44 E-value=3.5e-13 Score=132.99 Aligned_cols=142 Identities=13% Similarity=0.073 Sum_probs=123.8
Q ss_pred chhhHHHHHHHHHHhhhhhhhccccCCCCchHHHHHHHHHHHHHHHHHhccc----cHHHHHHHHHHhhccchhhHhhhh
Q 039541 119 SGLPSSCFFIGCLLGGLALSTLGDSSSLGRKKLLFLSCFAMSITALATIFAN----NIWIYSTIRFVAGFFRAPIMTSVI 194 (521)
Q Consensus 119 ~~~~~s~~~lg~~i~~~~~g~l~dr~~~Grr~~l~~~~~~~~~~~~~~~~~~----~~~~l~~~r~l~G~~~g~~~~~~~ 194 (521)
.+...++..++..++.++.|+++|| +|||+++.++.++.+++..+..... +++.+++.+++.|++.+...+...
T Consensus 253 ~g~~~~~~~i~~i~~~~~~g~l~dr--~g~r~~l~~~~~~~~v~~~l~~~~~~~~~~~~~l~l~~~l~g~~~~~~~~~~~ 330 (418)
T TIGR00889 253 ASIWMSLSQFSEIFFILTIPFFLKR--FGIKKVMLLSLVAWALRFGFFAYGDPEYFGYALLFLSMIVYGCAFDFFNISGS 330 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH--hCcHHHHHHHHHHHHHHHHHHHHcCcchhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4899999999999999999999999 9999999999999998877776642 346778889999999998889999
Q ss_pred hheeeeecCcchhHHHHHHH-HHHHHHHHHHHHH-HHhhcC------CchhHHHHHHHHHHHHHHhhhceeeecch
Q 039541 195 VLLSEMVSKRWRGQVVIIGF-TFFSFGLVSLPAV-AYLSRG------SSWKMLYVWTSIPSIVCCIIIYPFISESP 262 (521)
Q Consensus 195 ~~i~~~~~~~~rg~~~~~~~-~~~~~G~~i~~~i-~~~~~~------~~wr~~f~~~~~~~~~~~~~~~~~~~esp 262 (521)
.++.|++|+++|++++++.+ ...++|.++||.+ |.+.+. +||+..|.+.+++.++..++.++++||+.
T Consensus 331 ~~i~~~~p~~~~g~~~g~~~~~~~~lg~~iGp~l~G~l~~~~g~~~~~~~~~~f~~~~~~~~i~~~l~~~~~~~~~ 406 (418)
T TIGR00889 331 VFVEKEVPVHIRASAQGLFTLMCNGFGSLLGYILSGVMVEKMFAYGTFDWQTMWLFFAGYIAILAVLFMIFFKYSH 406 (418)
T ss_pred HHHHHHCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHHHHHhCCcc
Confidence 99999999999999999997 6788999999999 666654 57999999998888888878888888764
No 127
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=99.41 E-value=6.5e-11 Score=112.04 Aligned_cols=344 Identities=14% Similarity=0.036 Sum_probs=208.0
Q ss_pred Ccceeee-cceeeCCccccchhhHHHHHHHHHHhhhhhhhccccCCCCchHHHHHHHHHHHHHHHHHhccccHHHHHHHH
Q 039541 101 DTTIISD-WSLECAGSSILSGLPSSCFFIGCLLGGLALSTLGDSSSLGRKKLLFLSCFAMSITALATIFANNIWIYSTIR 179 (521)
Q Consensus 101 ~~~i~~~-~~~~~~~~~~~~~~~~s~~~lg~~i~~~~~g~l~dr~~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r 179 (521)
.|.+.+. .|++.+|. ..-+.-...-.+....++...+.|. .|.|++++++.+...+..++..+.++...+-+..
T Consensus 27 ~~yL~~~~kn~T~~qv---~~~i~Pv~tYSyl~~l~~vflltd~--l~Ykpviil~~~~~i~t~~lll~~~sv~~mq~~q 101 (412)
T PF01770_consen 27 TPYLTGPDKNFTEEQV---NNEIYPVWTYSYLAFLLPVFLLTDY--LRYKPVIILQALSYIITWLLLLFGTSVLAMQLMQ 101 (412)
T ss_pred hHHHcCCccCCCHHHH---HHhhhhHHHHHHHHHHHHHHHHHHH--hhhhHHHHHHHHHHHHHHHHHHHHCcHHHHHHHH
Confidence 4555554 77877665 2445556666777888899999999 9999999999999999999999999999999999
Q ss_pred HHhhccchhhHhhhhhheeeeecCcchhHHHHHHHHHHHHHHHHHHHHHHhh---cCCchhHHHHHHHHHHHHHHhhhce
Q 039541 180 FVAGFFRAPIMTSVIVLLSEMVSKRWRGQVVIIGFTFFSFGLVSLPAVAYLS---RGSSWKMLYVWTSIPSIVCCIIIYP 256 (521)
Q Consensus 180 ~l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~i~~~i~~~~---~~~~wr~~f~~~~~~~~~~~~~~~~ 256 (521)
++.|++.+ ...+.++|+-...|+++--++.+...++..+|..++.++|-++ ...+.+...++......+.+ +..+
T Consensus 102 ~~yg~~~a-~evay~sYiys~v~~~~yq~vts~~raa~l~g~~~s~~lgQllvs~~~~sy~~L~~isl~~~~~a~-~~~~ 179 (412)
T PF01770_consen 102 FFYGLATA-AEVAYYSYIYSVVDKEHYQKVTSYTRAATLVGRFISSLLGQLLVSFGGVSYFQLNYISLASVSLAL-LIAL 179 (412)
T ss_pred HHHHHHHH-HHHHHHHHheeecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHH-HHHH
Confidence 99999987 5788889999999999999999999999999999998887544 34456666666655555544 5556
Q ss_pred eeecchhHHHhcCCHHHHHHHHHHHhhhcCCCCCCCccccccCCCCCccccCCCc----ccccccHHHHhccHHHHHHHH
Q 039541 257 FISESPRWLFIHGHEAEAMAVLKRLASRSNYQSDYGLESCCLSNMPPKAKNVIPK----LDLYSSLKDLFNRKWALRRLL 332 (521)
Q Consensus 257 ~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~l~~~~~~~~~~~ 332 (521)
++|..++...-+++.++... ..+ .+.+...+..+...+..+.+....... ......+++..++|.+++..+
T Consensus 180 fLP~~~~S~~f~r~~~~~~~-~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~y~~~~ll~WSl 254 (412)
T PF01770_consen 180 FLPMPKRSLFFHRKPPAEQD-ANE----SESDKMNESPESSSSTEKSPSTESSSRKSVLRLLWKDFKSCYSNPRLLLWSL 254 (412)
T ss_pred HcCCCCcccceeccCccccc-ccc----ccccccccccccccccccCcccccchHHHHHHHHHHHHHHHhcCchHHHHHH
Confidence 77776543322221111000 000 000000000000000000000000000 011235566677777665555
Q ss_pred HHHHHHHHHHH-HHHhHHhhccC--CCccH---HHHHHHHHHHhHhHHHHHHHHHhhcCCchHHHH--HHHHHHHHHHHH
Q 039541 333 TIMALAFGIGV-VYFGLLLGVGN--LSFNI---YLSLAFNGLLDIPAYLLTFILIERWSRKSSILT--FCILSGTCSAIC 404 (521)
Q Consensus 333 ~~~~~~~~~~~-~~~~~~~~~~~--~~~~~---~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~--~~~~~~i~~~~~ 404 (521)
-..+...+... ..|...++-.. ..... +..-....+.+.++.+..|++..++.+...+.+ ..++.+..++++
T Consensus 255 WWa~atcgy~qv~nYvQ~LW~~v~~~~~~~vYNG~VeA~~tllgA~~al~~g~v~~~w~~~~~l~l~~~S~l~a~~L~lm 334 (412)
T PF01770_consen 255 WWAFATCGYYQVINYVQSLWDTVPPSDNESVYNGAVEAASTLLGAIAALLAGYVKVNWDRWGELALGVFSLLQAGLLFLM 334 (412)
T ss_pred HHHHHHhHHHHHHHHHHHHHHhcCCCCCCcccchHHHHHHHHHHHHHHHHHhHhhcchHHHHHHHHHHHHHHHHHHHHHH
Confidence 44444444433 33333333222 11111 222233445555677778888666665443333 333444444444
Q ss_pred HhcCCchHHHHHHHHHHHHHHHHHHHHHHHHhhccccCchhhhhhhHHHHHhhh
Q 039541 405 VAIGDEQEVLQIGLELASFFSACVAFNVLLVFGTELFTTCVRNSTTSLVRQAVN 458 (521)
Q Consensus 405 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ 458 (521)
....+. |..++..++++.......++...-++.....+.-|...|+.++...
T Consensus 335 ~~t~~I--wv~Y~~yIif~~~y~fliTiA~~qIA~~l~~e~yaLVFGiNtf~Al 386 (412)
T PF01770_consen 335 SFTGNI--WVCYAGYIIFRSLYMFLITIASFQIAKNLSEERYALVFGINTFVAL 386 (412)
T ss_pred HHhhHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHhccccceeeeeeeHHHHHH
Confidence 443333 7777888888877777777776666666666666777777766553
No 128
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.41 E-value=2.2e-12 Score=126.69 Aligned_cols=150 Identities=10% Similarity=0.078 Sum_probs=123.4
Q ss_pred ceeeecceeeCCccccchhhHHHHHHHHHHhhhhhhhccccCCCCchHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHh
Q 039541 103 TIISDWSLECAGSSILSGLPSSCFFIGCLLGGLALSTLGDSSSLGRKKLLFLSCFAMSITALATIFANNIWIYSTIRFVA 182 (521)
Q Consensus 103 ~i~~~~~~~~~~~~~~~~~~~s~~~lg~~i~~~~~g~l~dr~~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~ 182 (521)
.+++++|++..+. +++.+...++..++.++.|+++|| +|||+.+..+.....+......++++.+.+++.+++.
T Consensus 242 ~l~~~~~~~~~~~----g~~~~~~~~~~i~~~~~~G~l~dr--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~ 315 (393)
T PRK15011 242 FIINELHLPEKLA----GVMMGTAAGLEIPTMLIAGYFAKR--LGKRFLMRVAAVAGVCFYAGMLMAHSPAILLGLQLLN 315 (393)
T ss_pred HHHHHcCCCHHHH----HHHHHHHHHHHHHHHHHHHHHHHH--hChHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 3456788887665 888888788888899999999999 9999988887776666655566678888888999999
Q ss_pred hccchhhHhhhhhheeeeecCcchhHHHHHHHHHHHHHHHHHHHH-HHhhcCCchhHHHHHHHHHHHHHHhhhceeeec
Q 039541 183 GFFRAPIMTSVIVLLSEMVSKRWRGQVVIIGFTFFSFGLVSLPAV-AYLSRGSSWKMLYVWTSIPSIVCCIIIYPFISE 260 (521)
Q Consensus 183 G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~i~~~i-~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~~~e 260 (521)
+++.|...+....+..|.+|+ +|++++++++....+|..++|.+ +.+.+.++|+..|++.+++.++.+ +..+++||
T Consensus 316 ~~~~g~~~~~~~~~~~~~~p~-~~g~~~~~~~~~~~lg~~~g~~l~G~i~~~~g~~~~~~~~~~~~~~~~-~~~~~~~~ 392 (393)
T PRK15011 316 AIYIGILGGIGMLYFQDLMPG-QAGSATTLYTNTSRVGWIIAGSLAGIVAEIWNYHAVFWFALVMIIATL-FCLLRIKD 392 (393)
T ss_pred HHHHHHHHHHHHHHHHHhCCC-CcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHH-HHHHhhcC
Confidence 988888777778888898884 69999999999999999999998 677777899999998888887777 55455554
No 129
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.39 E-value=1.5e-12 Score=127.42 Aligned_cols=144 Identities=13% Similarity=0.009 Sum_probs=122.6
Q ss_pred cceeeecceeeCCccccchhhHHHHHHHHHHhhhhhhhccccCCCCchHHHHHHHHHHHHHHHHHhccccH--HHHHHHH
Q 039541 102 TTIISDWSLECAGSSILSGLPSSCFFIGCLLGGLALSTLGDSSSLGRKKLLFLSCFAMSITALATIFANNI--WIYSTIR 179 (521)
Q Consensus 102 ~~i~~~~~~~~~~~~~~~~~~~s~~~lg~~i~~~~~g~l~dr~~~Grr~~l~~~~~~~~~~~~~~~~~~~~--~~l~~~r 179 (521)
+.+.++++.+.++. +++.+.+.++..++.++.|+++|| +|||+.+.++.++.+++.++..+.++. ..+++..
T Consensus 229 ~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~g~l~dr--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (377)
T TIGR00890 229 KPYGQSLGLSDGFL----VLAVSISSIFNGGGRPFLGALSDK--IGRQKTMSIVFGISAVGMAAMLFIPMLNDVLFLATV 302 (377)
T ss_pred HHHHHHcCCCHHHH----HHHHHHHHHHHHHHHHHHHHHHHH--HhhhhhhhHHHHHHHHHHHHHHHcccchhHHHHHHH
Confidence 33446677776555 889999999999999999999999 999999999999999988888777643 3455667
Q ss_pred HHhhccchhhHhhhhhheeeeecCcchhHHHHHHHHHHHHHHHHHHHH-HHhhcCCchhHHHHHHHHHHHHHH
Q 039541 180 FVAGFFRAPIMTSVIVLLSEMVSKRWRGQVVIIGFTFFSFGLVSLPAV-AYLSRGSSWKMLYVWTSIPSIVCC 251 (521)
Q Consensus 180 ~l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~i~~~i-~~~~~~~~wr~~f~~~~~~~~~~~ 251 (521)
++.|++.+...+....++.|.+|+++|+++.++.+....+|..++|.+ +.+.+..||++.|++.+++.++..
T Consensus 303 ~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~f~~~~~~~~~~~ 375 (377)
T TIGR00890 303 ALVFFTWGGTISLFPSLVSDIFGPANSAANYGFLYTAKAVAGIFGGLIASHALTEIGFEYTFIVTGAFALTSL 375 (377)
T ss_pred HHHHHHhccchhccHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHhc
Confidence 888988888888888899999999999999999999999999999988 778888899999999887776654
No 130
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.36 E-value=3.5e-12 Score=123.36 Aligned_cols=147 Identities=22% Similarity=0.296 Sum_probs=133.1
Q ss_pred Ccceeee-cceeeCCccccchhhHHHHHHHHHHhhhhhhhccccCCCCchH-HHHHHHHHHHHHHHHHhccccHHHHHHH
Q 039541 101 DTTIISD-WSLECAGSSILSGLPSSCFFIGCLLGGLALSTLGDSSSLGRKK-LLFLSCFAMSITALATIFANNIWIYSTI 178 (521)
Q Consensus 101 ~~~i~~~-~~~~~~~~~~~~~~~~s~~~lg~~i~~~~~g~l~dr~~~Grr~-~l~~~~~~~~~~~~~~~~~~~~~~l~~~ 178 (521)
.|.+.++ +|.+..+. ++..+...++..++.++.|++.|| +|||+ .+..+..+..++.++..+.++.+.+++.
T Consensus 198 ~~~~~~~~~~~~~~~~----~~~~~~~~~~~~i~~~~~~~~~~~--~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 271 (352)
T cd06174 198 LPLYLQEVLGLSAAEA----GLLLSLFGLGGILGALLGGLLSDR--LGRRRLLLLIGLLLAALGLLLLALAPSLALLLVA 271 (352)
T ss_pred HHHHHHHhcCCCHHHH----HHHHHHHHHHHHHHHHHHHHHHHH--HHhhhHHHHHHHHHHHHHHHHHHHhccHHHHHHH
Confidence 3444444 47777555 999999999999999999999999 99999 9999999999999999999999999999
Q ss_pred HHHhhccchhhHhhhhhheeeeecCcchhHHHHHHHHHHHHHHHHHHHH-HHhhcCCchhHHHHHHHHHHHHHHhh
Q 039541 179 RFVAGFFRAPIMTSVIVLLSEMVSKRWRGQVVIIGFTFFSFGLVSLPAV-AYLSRGSSWKMLYVWTSIPSIVCCII 253 (521)
Q Consensus 179 r~l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~i~~~i-~~~~~~~~wr~~f~~~~~~~~~~~~~ 253 (521)
.++.|++.+...+....++.|..|+++|++.+++.+....+|..+++.+ +.+.+..+|+..+++.+++.++..++
T Consensus 272 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~g~l~~~~~~~~~~~~~~~~~~i~~i~ 347 (352)
T cd06174 272 LLLLGFGLGFAFPALLTLASELAPPEARGTASGLFNTFGSLGGALGPLLAGLLLDTGGYGGVFLILAALALLAALL 347 (352)
T ss_pred HHHHHHHHhccchhHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999998 77777889999999999988887733
No 131
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.35 E-value=5.6e-12 Score=124.69 Aligned_cols=145 Identities=19% Similarity=0.145 Sum_probs=122.1
Q ss_pred CcceeeecceeeCCccccchhhHHHHHHHHHHhhhhhhhccccCCCCchHHHHHHHHHHHHHHHHHhccccHHHHHHHHH
Q 039541 101 DTTIISDWSLECAGSSILSGLPSSCFFIGCLLGGLALSTLGDSSSLGRKKLLFLSCFAMSITALATIFANNIWIYSTIRF 180 (521)
Q Consensus 101 ~~~i~~~~~~~~~~~~~~~~~~~s~~~lg~~i~~~~~g~l~dr~~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~ 180 (521)
.|.+.++.|.+..+. +++.+.+.++..++.++.|+++|| +|||+.+..+.+..+++.++..+.++.+.+.+.-+
T Consensus 243 ~p~~~~~~g~s~~~~----~~~~~~~~~~~~~~~~~~g~l~dr--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (406)
T PRK11551 243 LPSLLVGQGLSRSQA----GLVQIAFNIGGALGSLLIGALMDR--LRPRRVVLLIYAGILASLAALAAAPSFAGMLLAGF 316 (406)
T ss_pred HHHHHHhCCCChhhh----hHHHHHHHHHHHHHHHHHHHHHHH--HhHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHH
Confidence 355556678888666 999999999999999999999999 99999998887777777777777888888888889
Q ss_pred HhhccchhhHhhhhhheeeeecCcchhHHHHHHHHHHHHHHHHHHHH-HHhhcCC-chhHHHHHHHHHHHHHH
Q 039541 181 VAGFFRAPIMTSVIVLLSEMVSKRWRGQVVIIGFTFFSFGLVSLPAV-AYLSRGS-SWKMLYVWTSIPSIVCC 251 (521)
Q Consensus 181 l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~i~~~i-~~~~~~~-~wr~~f~~~~~~~~~~~ 251 (521)
+.|++.+...+...+++.|.+|+++|+++.++.+....+|..++|.+ |.+.+.. +|...+++.+...++..
T Consensus 317 ~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~~~~~~~~~ 389 (406)
T PRK11551 317 AAGLFVVGGQSVLYALAPLFYPTQVRGTGVGAAVAVGRLGSMAGPLLAGQLLALGRSTVGVIGASIPVILVAA 389 (406)
T ss_pred HHHHHHHhHHHHHHHHHHHHcchhhhhhhhhHHHHhhhHHHHHHhhhHhhhhccCCchHHHHHHHHHHHHHHH
Confidence 99998888888899999999999999999999999999999999998 6666653 56666666665555555
No 132
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.35 E-value=9.6e-12 Score=122.69 Aligned_cols=135 Identities=13% Similarity=0.163 Sum_probs=119.7
Q ss_pred hhhHHHHHHHHHHhhhhhhhccccCCCCchHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHhhccchhhHhhhhhheee
Q 039541 120 GLPSSCFFIGCLLGGLALSTLGDSSSLGRKKLLFLSCFAMSITALATIFANNIWIYSTIRFVAGFFRAPIMTSVIVLLSE 199 (521)
Q Consensus 120 ~~~~s~~~lg~~i~~~~~g~l~dr~~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~ 199 (521)
++..+.+.++..++.++.|++.|| +|||+.+..+..+.+++.++..+.++.+.+++.+++.|++.+...+.....+.|
T Consensus 252 ~~~~~~~~~~~~~~~~~~g~l~~r--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~ 329 (399)
T PRK05122 252 ALALTLFGVAFVGARLLFGNLINR--LGGLRVAIVSLLVEILGLLLLWLAPSPWMALIGAALTGFGFSLVFPALGVEAVK 329 (399)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHH--hccHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 677788889999999999999999 999999999999999988888888999888999999999999888888888889
Q ss_pred eecCcchhHHHHHHHHHHHHHHHHHHHH-HHhhcCCchhHHHHHHHHHHHHHHhhhce
Q 039541 200 MVSKRWRGQVVIIGFTFFSFGLVSLPAV-AYLSRGSSWKMLYVWTSIPSIVCCIIIYP 256 (521)
Q Consensus 200 ~~~~~~rg~~~~~~~~~~~~G~~i~~~i-~~~~~~~~wr~~f~~~~~~~~~~~~~~~~ 256 (521)
..|+++|+++.++++....+|..+++.+ +.+.+..||++.|++.++..++..++.++
T Consensus 330 ~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 387 (399)
T PRK05122 330 RVPPQNRGAALGAYSVFLDLSLGITGPLAGLVASWFGYPSIFLAAALAALLGLALTWL 387 (399)
T ss_pred hCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999887776 88888889999999988887777644443
No 133
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=99.35 E-value=9.2e-11 Score=107.94 Aligned_cols=149 Identities=16% Similarity=0.156 Sum_probs=110.1
Q ss_pred eecceeeCCccccchhhHHHHHHHHHHhhhhhhhccccCCCCchHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHhhcc
Q 039541 106 SDWSLECAGSSILSGLPSSCFFIGCLLGGLALSTLGDSSSLGRKKLLFLSCFAMSITALATIFANNIWIYSTIRFVAGFF 185 (521)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~s~~~lg~~i~~~~~g~l~dr~~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~ 185 (521)
+++|.++.|. +.+....+...++..++.|.++|| +|||+.-+.-.++++++++ +-..++++.++++|++.|++
T Consensus 62 ~~yg~~~~qI----a~Lf~~Gf~Ss~i~g~~~G~laD~--~Grk~~cl~~cily~~scl-~k~~~~~~~L~~GRvlgGia 134 (354)
T PF05631_consen 62 ESYGFSEHQI----AILFVAGFASSAIFGTFVGSLADR--YGRKKACLLFCILYSLSCL-TKHSSNYPVLLLGRVLGGIA 134 (354)
T ss_pred HHcCCCHHHH----HHHHHHHHHHHHHHHHHHHHHHHh--cCchHHHHHHHHHHHHHHH-HHhccccHHHHHHHHHHHHH
Confidence 5799998666 999999999999999999999999 9999999999999999996 45668999999999999999
Q ss_pred chhhHhhhhhhe-eeee----cCcchhHHHHHHH-HHHHHHHHHHHHHH-HhhcCCc--hhHHHHHHHHHHHHHHhhhce
Q 039541 186 RAPIMTSVIVLL-SEMV----SKRWRGQVVIIGF-TFFSFGLVSLPAVA-YLSRGSS--WKMLYVWTSIPSIVCCIIIYP 256 (521)
Q Consensus 186 ~g~~~~~~~~~i-~~~~----~~~~rg~~~~~~~-~~~~~G~~i~~~i~-~~~~~~~--wr~~f~~~~~~~~~~~~~~~~ 256 (521)
.+..+.+--+++ .|.- |++..+..++... ...++-.+++.+++ .+.+..+ -..+|....++.++..+++..
T Consensus 135 TSLLfS~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~~g~vaPF~~a~~~l~~~~~~I~~ 214 (354)
T PF05631_consen 135 TSLLFSAFESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVLADWFGFGPVAPFDAAIVLLAVAAVLILK 214 (354)
T ss_pred HHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHhCCCCcchHHHHHHHHHHHHHHHHh
Confidence 999999888864 4442 3333333333333 22233333444443 4444443 478898888888777756555
Q ss_pred eeecc
Q 039541 257 FISES 261 (521)
Q Consensus 257 ~~~es 261 (521)
..+|.
T Consensus 215 ~W~EN 219 (354)
T PF05631_consen 215 TWPEN 219 (354)
T ss_pred ccccc
Confidence 56664
No 134
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.35 E-value=3.2e-12 Score=126.57 Aligned_cols=137 Identities=20% Similarity=0.296 Sum_probs=121.8
Q ss_pred chhhHHHHHHHHHHhhhhhhhccccCCCCchHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHhhccchhhHhhhhhhee
Q 039541 119 SGLPSSCFFIGCLLGGLALSTLGDSSSLGRKKLLFLSCFAMSITALATIFANNIWIYSTIRFVAGFFRAPIMTSVIVLLS 198 (521)
Q Consensus 119 ~~~~~s~~~lg~~i~~~~~g~l~dr~~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~ 198 (521)
.+.+.+++.++..++.+..|+++|| +|||+.+..+.++.+++.+...+.++.+.+++.+++.|++.+...+...+++.
T Consensus 260 ~g~~~~~~~l~~~~~~~~~g~l~dr--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 337 (408)
T PRK09874 260 SGMIASVPGVAALLSAPRLGKLGDR--IGPEKILITALIFSVLLLIPMSFVQTPLQLGILRFLLGAADGALLPAVQTLLV 337 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhc--cccchhHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhHhhHHHHHHHHH
Confidence 3667777888889999999999999 99999999999988888888888888999999999999999999999999999
Q ss_pred eeecCcchhHHHHHHHHHHHHHHHHHHHH-HHhhcCCchhHHHHHHHHHHHHHHhhhcee
Q 039541 199 EMVSKRWRGQVVIIGFTFFSFGLVSLPAV-AYLSRGSSWKMLYVWTSIPSIVCCIIIYPF 257 (521)
Q Consensus 199 ~~~~~~~rg~~~~~~~~~~~~G~~i~~~i-~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~ 257 (521)
+..|+++||+.+++.+....+|..+||.+ |.+.+..||++.|++.+++.++..++.++.
T Consensus 338 ~~~~~~~~g~~~~~~~~~~~~g~~~gp~~~G~l~~~~g~~~~f~~~~~~~l~~~~~~~~~ 397 (408)
T PRK09874 338 YNSSNQIAGRIFSYNQSFRDIGNVTGPLMGAAISANYGFRAVFLVTAGVVLFNAVYSWNS 397 (408)
T ss_pred HhCCcccceeeehHHHHHHHHHHHhhHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999 677788899999999998888877454443
No 135
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.35 E-value=1.2e-11 Score=122.81 Aligned_cols=155 Identities=14% Similarity=0.075 Sum_probs=133.2
Q ss_pred cceeee-cceeeCCccccchhhHHHHHHHHHHhhhhhhhccccCCCCchHHHHHHHHHHHHHHHHHhccccHHHHHHHHH
Q 039541 102 TTIISD-WSLECAGSSILSGLPSSCFFIGCLLGGLALSTLGDSSSLGRKKLLFLSCFAMSITALATIFANNIWIYSTIRF 180 (521)
Q Consensus 102 ~~i~~~-~~~~~~~~~~~~~~~~s~~~lg~~i~~~~~g~l~dr~~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~ 180 (521)
|.+.++ +|.+..+. |++.+...++..++.++.+++.|| .++++.+..+.++.+++.++..+.++.+.+.++.+
T Consensus 247 p~~~~~~~g~~~~~~----g~~~~~~~~g~~ig~~~~~~l~~~--~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (417)
T PRK10489 247 PALADEVWQMGAAQI----GLLYAAVPLGAALGALTSGWLAHS--ARPGLLMLLSTLGSFLAVGLFGLMPMWILAVLCLA 320 (417)
T ss_pred HHHHHhccCCChhHh----HHHHHHHHHHHHHHHHHHHHhhhc--cCcchHHHHHHHHHHHHHHHHHccchHHHHHHHHH
Confidence 444444 88887665 999999999999999999999999 99998998888888888888888899888888999
Q ss_pred HhhccchhhHhhhhhheeeeecCcchhHHHHHHHHHHHHHHHHHHHH-HHhhcCCchhHHHHHHHHHHHHHHhhhceeee
Q 039541 181 VAGFFRAPIMTSVIVLLSEMVSKRWRGQVVIIGFTFFSFGLVSLPAV-AYLSRGSSWKMLYVWTSIPSIVCCIIIYPFIS 259 (521)
Q Consensus 181 l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~i~~~i-~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~~~ 259 (521)
+.|++.+...+...+++.|..|++.||++++++.....+|..+||.+ |.+.+..|++..+++.+...++..++....+|
T Consensus 321 ~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~l~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 400 (417)
T PRK10489 321 LFGYLSAISSLLQYTLLQTQTPDEMLGRINGLWTAQNVTGDAIGAALLGGLGAMMTPVASASASGFGLLIIGVLLLLVLG 400 (417)
T ss_pred HHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHhcc
Confidence 99999888888888999999999999999999999999999999998 78888889999998888777776656666666
Q ss_pred cch
Q 039541 260 ESP 262 (521)
Q Consensus 260 esp 262 (521)
+.+
T Consensus 401 ~~~ 403 (417)
T PRK10489 401 ELR 403 (417)
T ss_pred ccc
Confidence 653
No 136
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.33 E-value=1.4e-11 Score=120.41 Aligned_cols=148 Identities=16% Similarity=0.171 Sum_probs=123.4
Q ss_pred eeeecceeeCCccccchhhHHHHHHHHHHhhhhhhhccccCCCCchHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHhh
Q 039541 104 IISDWSLECAGSSILSGLPSSCFFIGCLLGGLALSTLGDSSSLGRKKLLFLSCFAMSITALATIFANNIWIYSTIRFVAG 183 (521)
Q Consensus 104 i~~~~~~~~~~~~~~~~~~~s~~~lg~~i~~~~~g~l~dr~~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G 183 (521)
+.+++|.++.+. +++.+...+...++.++.|++.|| +|||+++.++.++..+..+...+.++.+.+++.+++.|
T Consensus 226 ~~~~~g~~~~~~----g~~~~~~~~~~~~~~~~~g~l~~r--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 299 (375)
T TIGR00899 226 IIHELGLPDKLA----GLMMGTAAGLEIPFMLLAGYLIKR--FGKRRLMLLAALAGVAFYTGLAADNSLWALLMLQLLNA 299 (375)
T ss_pred HHHHcCCCHHHH----HHHHHHHHHHHHHHHHhHHHHHHH--hcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 346778887655 888887777788889999999999 99999998888777766666667788888888999999
Q ss_pred ccchhhHhhhhhheeeeecCcchhHHHHHHHHHHHHHHHHHHHH-HHhhcCCchhHHHHHHHHHHHHHHhhhceeee
Q 039541 184 FFRAPIMTSVIVLLSEMVSKRWRGQVVIIGFTFFSFGLVSLPAV-AYLSRGSSWKMLYVWTSIPSIVCCIIIYPFIS 259 (521)
Q Consensus 184 ~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~i~~~i-~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~~~ 259 (521)
++.+...+....++.|..|+ +|++++++++....+|..++|.+ +.+.+..||+..|++.++..++.. +...+++
T Consensus 300 ~~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~g~~~~g~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~~ 374 (375)
T TIGR00899 300 IFIGILAGIGMLYFQDLMPG-RAGAATTLYTNTGRVGWIIAGSVGGILAERWSYHAVYWFAIVMLIVAL-FCLLLIK 374 (375)
T ss_pred HHHHHHHHHHHHHHHHhCcc-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHH-HHHheec
Confidence 99998888888899998875 56799999999999999999988 777788899999999888887777 4444444
No 137
>PRK12382 putative transporter; Provisional
Probab=99.31 E-value=1.7e-11 Score=120.62 Aligned_cols=136 Identities=15% Similarity=0.149 Sum_probs=121.2
Q ss_pred hhhHHHHHHHHHHhhhhhhhccccCCCCchHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHhhccchhhHhhhhhheee
Q 039541 120 GLPSSCFFIGCLLGGLALSTLGDSSSLGRKKLLFLSCFAMSITALATIFANNIWIYSTIRFVAGFFRAPIMTSVIVLLSE 199 (521)
Q Consensus 120 ~~~~s~~~lg~~i~~~~~g~l~dr~~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~ 199 (521)
++..+.+.++..+++++.|++.|| +|+|+.+..+..+.+++.++..+.++.+.+++.+++.|++.+...+...+.+.|
T Consensus 252 ~~~~~~~~~~~~~~~~~~g~l~~r--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~ 329 (392)
T PRK12382 252 GFTLTAFGGAFVLMRVLFGWMPDR--FGGVKVAIVSLLVETVGLLLLWLAPTAWVALAGAALTGAGCSLIFPALGVEVVK 329 (392)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHh--cCCCeehHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHhHHHHHHHHHHH
Confidence 666777888889999999999999 999999999999999998888888999888899999999999888888888899
Q ss_pred eecCcchhHHHHHHHHHHHHHHHHHHHH-HHhhcCCchhHHHHHHHHHHHHHHhhhcee
Q 039541 200 MVSKRWRGQVVIIGFTFFSFGLVSLPAV-AYLSRGSSWKMLYVWTSIPSIVCCIIIYPF 257 (521)
Q Consensus 200 ~~~~~~rg~~~~~~~~~~~~G~~i~~~i-~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~ 257 (521)
.+|+++||++.++.+....+|..++|.+ +.+.+..||+..|.+.+++.++..++.++.
T Consensus 330 ~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 388 (392)
T PRK12382 330 RVPSQVRGTALGGYAAFQDIAYGVSGPLAGMLATSFGYPSVFLAGAISAVLGIIVTILS 388 (392)
T ss_pred hcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHhh
Confidence 9999999999999999999999999988 788888899999999988887777444433
No 138
>PRK03545 putative arabinose transporter; Provisional
Probab=99.30 E-value=4.9e-11 Score=117.20 Aligned_cols=150 Identities=13% Similarity=0.048 Sum_probs=120.6
Q ss_pred cceeeecceeeCCccccchhhHHHHHHHHHHhhhhhhhccccCCCCchHHHHHHHHHHHHHH-HHHhccccHHHHHHHHH
Q 039541 102 TTIISDWSLECAGSSILSGLPSSCFFIGCLLGGLALSTLGDSSSLGRKKLLFLSCFAMSITA-LATIFANNIWIYSTIRF 180 (521)
Q Consensus 102 ~~i~~~~~~~~~~~~~~~~~~~s~~~lg~~i~~~~~g~l~dr~~~Grr~~l~~~~~~~~~~~-~~~~~~~~~~~l~~~r~ 180 (521)
|.+.+++|.+.++. +++.+...++..+++++.|+++|| +|||+... +..+..++. ++....++.+.+++..+
T Consensus 230 ~~l~~~~g~s~~~~----~~~~~~~~~~~~~g~~~~g~l~dr--~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~ 302 (390)
T PRK03545 230 PFVQQVAGLSENFA----TLLLLLFGGAGIIGSVLFSRLGNR--HPSGFLLI-AIALLLVCLLLLLPAANSEWHLSVLSI 302 (390)
T ss_pred HHHHHhcCCCccHH----HHHHHHHHHHHHHHHHHHHHHhhc--cchhHHHH-HHHHHHHHHHHHHHHhchHHHHHHHHH
Confidence 34556678887666 999999999999999999999999 99887544 444444443 34456678888888999
Q ss_pred HhhccchhhHhhhhhheeeeecCcchhHHHHHHHHHHHHHHHHHHHH-HHhhcCCchhHHHHHHHHHHHHHHhhhceeee
Q 039541 181 VAGFFRAPIMTSVIVLLSEMVSKRWRGQVVIIGFTFFSFGLVSLPAV-AYLSRGSSWKMLYVWTSIPSIVCCIIIYPFIS 259 (521)
Q Consensus 181 l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~i~~~i-~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~~~ 259 (521)
+.|++.+...+...+.+.+..| ++|++++++++....+|..+||++ |.+.+..|++..|++.+++.++..+..+...+
T Consensus 303 l~g~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~G~~~~G~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 381 (390)
T PRK03545 303 FWGIAIMCIGLAMQVKVLKLAP-DATDVAMALFSGIFNIGIGAGALLGNQVSLHLGLSSIGYVGAALALAALVWSILIFR 381 (390)
T ss_pred HHHHHHhcchHHHHHHHHHhCC-CcHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChhHHHHHHHHHHHHHHHHHHHHcc
Confidence 9999887777777788888766 689999999999999999999999 78889999999999999888887755555443
No 139
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.30 E-value=1.1e-11 Score=124.06 Aligned_cols=144 Identities=8% Similarity=0.015 Sum_probs=118.3
Q ss_pred cceeeecceeeCCccccchhhHHHHHHHHHHhhhhhhhccccCCCC--chHHHH--HHHHHHHHHHHHHhccccHHHHHH
Q 039541 102 TTIISDWSLECAGSSILSGLPSSCFFIGCLLGGLALSTLGDSSSLG--RKKLLF--LSCFAMSITALATIFANNIWIYST 177 (521)
Q Consensus 102 ~~i~~~~~~~~~~~~~~~~~~~s~~~lg~~i~~~~~g~l~dr~~~G--rr~~l~--~~~~~~~~~~~~~~~~~~~~~l~~ 177 (521)
|.+.+++|.+..+. +++.+...++..+++++.|+++|| .+ +|+... .+.++.+++.++..++++++.+++
T Consensus 265 ~~~~~~~g~s~~~~----g~~~~~~~~~~~~~~~~~g~l~d~--~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~~~~~i 338 (455)
T TIGR00892 265 VPYAKDKGVDEYEA----AFLLSIIGFVDIFARPSCGLIAGL--KWIRPHVQYLFSFALLFNGLTHLLCALAGDYTGLVI 338 (455)
T ss_pred HHHHHHcCCCHHHH----HHHHHHHHHHHHHHHHHHHHHhcc--cccCHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHH
Confidence 44456678888666 999999999999999999999997 53 343333 344444555666677889999999
Q ss_pred HHHHhhccchhhHhhhhhheeeeecCcchhHHHHHHHHHHHHHHHHHHHH-HHhhcCC-chhHHHHHHHHHHHHHH
Q 039541 178 IRFVAGFFRAPIMTSVIVLLSEMVSKRWRGQVVIIGFTFFSFGLVSLPAV-AYLSRGS-SWKMLYVWTSIPSIVCC 251 (521)
Q Consensus 178 ~r~l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~i~~~i-~~~~~~~-~wr~~f~~~~~~~~~~~ 251 (521)
.+++.|++.+...+...+++.|.+|++++++++++++....+|.++||.+ |.+.+.. +|++.|++.+++.++..
T Consensus 339 ~~~~~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g~~~~~f~~~~~~~li~~ 414 (455)
T TIGR00892 339 YCIFFGLSFGSVGALLFEVLMDLVGAQRFSSAVGLVTIVECCAVLIGPPLAGRLVDATKNYKYIFYASGSIVVSAG 414 (455)
T ss_pred HHHHHHHHhchHHHHHHHHHHHHhhHHHHhhHHhHHHHHHHHHHHccccceeeeehhcCCcchHHHHhhHHHHHHH
Confidence 99999999999999999999999999999999999999999999999998 6676666 59999999888766655
No 140
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.28 E-value=4.7e-11 Score=116.84 Aligned_cols=140 Identities=8% Similarity=-0.058 Sum_probs=124.6
Q ss_pred eeeecceeeCCccccchhhHHHHHHHHHHhhhhhhhccccCCCCchHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHhh
Q 039541 104 IISDWSLECAGSSILSGLPSSCFFIGCLLGGLALSTLGDSSSLGRKKLLFLSCFAMSITALATIFANNIWIYSTIRFVAG 183 (521)
Q Consensus 104 i~~~~~~~~~~~~~~~~~~~s~~~lg~~i~~~~~g~l~dr~~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G 183 (521)
..+++|.+..+. |++.+...++..++.++.+++.|| +|+|+.+.++.++.++..++.+++++.+.+++.++++|
T Consensus 231 ~l~~~g~s~~~~----g~l~~~~~~~~i~~~~~~~~l~~r--~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~q~l~g 304 (382)
T TIGR00902 231 YWQAAGISASAT----GLLWGIGVLAEIIIFAFSNKLFQN--CSARDLLLISAIACVGRWAIIGAIEAFPLIFLLQILHC 304 (382)
T ss_pred HHHHCCCCHhHH----HHHHHHHHHHHHHHHHHhHHHHhh--CCHHHHHHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHH
Confidence 335688888666 999999999999999999999999 99999999999999999999999999999999999999
Q ss_pred ccchhhHhhhhhheeeeecCcchhHHHHHHH-HHHHHHHHHHHHH-HHhhcCCchhHHHHHHHHHHHHHH
Q 039541 184 FFRAPIMTSVIVLLSEMVSKRWRGQVVIIGF-TFFSFGLVSLPAV-AYLSRGSSWKMLYVWTSIPSIVCC 251 (521)
Q Consensus 184 ~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~-~~~~~G~~i~~~i-~~~~~~~~wr~~f~~~~~~~~~~~ 251 (521)
+..+...+....++.+. |+++|++..++++ ...++|.++++.+ |.+.+..|+ ..|++.+.++++.+
T Consensus 305 ~~~~~~~~~~~~~i~~~-~~~~~~~~q~~~~~~~~g~g~~~g~~~~G~l~~~~g~-~~~~~~~~~~~~~~ 372 (382)
T TIGR00902 305 GTFAVCHLAAMRYIAAQ-PGSEIAKLQALYNALAMGGLIAIFTAFAGFIYPTLGA-GTFVFMAIIAAAAF 372 (382)
T ss_pred HHHHHHHHHHHHHHHhC-CHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH-HHHHHHHHHHHHHH
Confidence 99999999999999998 9999999999986 5778999999999 778888886 66777777776655
No 141
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.28 E-value=4.1e-11 Score=120.57 Aligned_cols=143 Identities=19% Similarity=0.154 Sum_probs=110.1
Q ss_pred ceeeecceeeCCccccchhhHHHHHHHHHHhhhhhhhccccCCCCchHHHHHHHHHHHHHHH--HHhccccHHHHHHHHH
Q 039541 103 TIISDWSLECAGSSILSGLPSSCFFIGCLLGGLALSTLGDSSSLGRKKLLFLSCFAMSITAL--ATIFANNIWIYSTIRF 180 (521)
Q Consensus 103 ~i~~~~~~~~~~~~~~~~~~~s~~~lg~~i~~~~~g~l~dr~~~Grr~~l~~~~~~~~~~~~--~~~~~~~~~~l~~~r~ 180 (521)
.+++++|++..+. ++..+...++..++.+++|+++|| +|||+.+.....+..++.. .....++.+.+.+.++
T Consensus 284 yl~~~~g~s~~~a----~~~~~~~~~~~~ig~~~~G~lsDr--~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (467)
T PRK09556 284 YAFQELGFSKEDA----INTFTLFEIGALVGSLLWGWLSDL--ANGRRALVACIALALIIFTLGVYQHATSEYMYLASLF 357 (467)
T ss_pred HHHHccCCCHHHH----HHHHHHHHHHHHHHHHHHHHHHHH--HCCCchHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHH
Confidence 4567789988666 899999999999999999999999 9999887765544444332 2234457777778888
Q ss_pred HhhccchhhHhhhhhheeeeecCcchhHHHHHHHHHHHH-HHHHHHHH-HHhhc------------CCchhHHHHHHHHH
Q 039541 181 VAGFFRAPIMTSVIVLLSEMVSKRWRGQVVIIGFTFFSF-GLVSLPAV-AYLSR------------GSSWKMLYVWTSIP 246 (521)
Q Consensus 181 l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~-G~~i~~~i-~~~~~------------~~~wr~~f~~~~~~ 246 (521)
+.|++...........+.|.+|++.||++.|+.+....+ |..++|.+ |++.+ ..+|+..|++.++.
T Consensus 358 ~~G~~~~~~~~~~~~~~~~~~p~~~~g~a~gi~~~~g~l~g~~~~~~~~G~i~~~~~~g~~~~~~~~~~~~~~f~~~~~~ 437 (467)
T PRK09556 358 ALGFLVFGPQLLIGVAAVGFVPKKAIGVANGIKGTFAYLFGDSFAKVGLGMIADPTKNGTPIFGYTLTGWAGTFAALDIA 437 (467)
T ss_pred HHHHHHhhHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHhHHHHhhhHHHHhcccccccccccccccChHHHHHHHHHH
Confidence 888654433333345667999999999999999988886 76888777 88887 56899999988777
Q ss_pred HHHHH
Q 039541 247 SIVCC 251 (521)
Q Consensus 247 ~~~~~ 251 (521)
.++..
T Consensus 438 ~~~~~ 442 (467)
T PRK09556 438 AIGCI 442 (467)
T ss_pred HHHHH
Confidence 77665
No 142
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.27 E-value=1.4e-10 Score=112.84 Aligned_cols=163 Identities=11% Similarity=-0.060 Sum_probs=119.3
Q ss_pred HHHHHHHHHHHHHHhHHhhccCCCccHHHHH---HHHHHHhHhHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHhcCC
Q 039541 333 TIMALAFGIGVVYFGLLLGVGNLSFNIYLSL---AFNGLLDIPAYLLTFILIERWSRKSSILTFCILSGTCSAICVAIGD 409 (521)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~i~~~~~~~~~~ 409 (521)
..++..+........+|.+..+.+.+..... ....++..++.++.|+++||+|||+.+..+..+..++.++..+...
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~ 86 (365)
T TIGR00900 7 AQLISLIGTAITQVALPLYVLAGTGSASVLSLAALAGMLPYVVLSPIAGALADRYDRKKVMIGADLIRAVLVAVLPFVAL 86 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhhHHHHhhchhHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344444555555666776666665544433 4455677788999999999999999999988887777666655431
Q ss_pred ---chHHHHHHHHHHHHHHHHHHHHHHHHhhccccCchhhhhhhHHHHHhhhhhhhHHHHHHHhh--ccchhHHHHHHHH
Q 039541 410 ---EQEVLQIGLELASFFSACVAFNVLLVFGTELFTTCVRNSTTSLVRQAVNLGAAFSPVLISAG--RQNEFLSFGVFGL 484 (521)
Q Consensus 410 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~~--~~~~~~~~~~~~~ 484 (521)
.+.+...+..++.+++.+...+...++..|.+|+++|+++.++.+....+|.+++|.+.+.. ..++...+.+.++
T Consensus 87 ~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~~~~~~~~~ 166 (365)
T TIGR00900 87 LGGLNIWQVYVLAGILAIAQAFFTPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLMYATLGIKWAIWVDAV 166 (365)
T ss_pred cCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHH
Confidence 12256677778888888888899999999999999999999999999999999999998763 3456666666666
Q ss_pred HHHHHhHhhhc
Q 039541 485 VVFCFGFFVVF 495 (521)
Q Consensus 485 ~~~~~~~~~~~ 495 (521)
..+++.+..+.
T Consensus 167 ~~~~~~~~~~~ 177 (365)
T TIGR00900 167 GFAISALLIVS 177 (365)
T ss_pred HHHHHHHHHHh
Confidence 55555444433
No 143
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.27 E-value=2e-11 Score=123.56 Aligned_cols=156 Identities=15% Similarity=0.117 Sum_probs=121.4
Q ss_pred CcceeeecceeeCCccccchhhHHHHHHHHHHhhhhhhhccccCCCCchHHHHHHHHHHHHHHHHHhc-----cc-----
Q 039541 101 DTTIISDWSLECAGSSILSGLPSSCFFIGCLLGGLALSTLGDSSSLGRKKLLFLSCFAMSITALATIF-----AN----- 170 (521)
Q Consensus 101 ~~~i~~~~~~~~~~~~~~~~~~~s~~~lg~~i~~~~~g~l~dr~~~Grr~~l~~~~~~~~~~~~~~~~-----~~----- 170 (521)
.|.+.+++|.+..+. ++......++..++.++.|+++|| +|||+.+.++.++.+++.++.++ .+
T Consensus 307 ~~~~~~~~g~~~~~~----~~~~~~~~~~~~~~~~~~g~l~d~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (481)
T TIGR00879 307 SPTIFENAGVSTDHA----FLVSIIVGAVNFAFTFVAIFLVDR--FGRRPLLLIGAAGMAICLFVLGILGASFVTGSSKS 380 (481)
T ss_pred HHHHHHHcCCCchHH----HHHHHHHHHHHHHHHHHHHHHHHH--hcchHHHHHHHHHHHHHHHHHHHHhhcccCCcccc
Confidence 466667788887555 888889999999999999999999 99999999998888887777652 12
Q ss_pred -cHHHHHHHHHHhhccchhhHhhhhhheeeeecCcchhHHHHHHHHHHHHHHHHHHHH-HHhhcCCchhHHHHHHHHHHH
Q 039541 171 -NIWIYSTIRFVAGFFRAPIMTSVIVLLSEMVSKRWRGQVVIIGFTFFSFGLVSLPAV-AYLSRGSSWKMLYVWTSIPSI 248 (521)
Q Consensus 171 -~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~i~~~i-~~~~~~~~wr~~f~~~~~~~~ 248 (521)
+...+....++.+.......+....++.|.+|+++|++++++.+....+|.+++|.+ +.+.++.+|++.|++.+++++
T Consensus 381 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~lg~~i~~~~~~~~~~~~~~~~~f~~~~~~~~ 460 (481)
T TIGR00879 381 SGNVAIVFILLFIAFFAMGWGPVPWVIVSEIFPLSLRPKGISIAVAANWLANFIVGFLFPTMLESIGVGGVFIFFGGLNV 460 (481)
T ss_pred hhHHHHHHHHHHHHHHHccccCeehhhhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccceehhHHHHHH
Confidence 223333333333322223446667788999999999999999999999999999987 777777899999999998888
Q ss_pred HHHhhhceeeecch
Q 039541 249 VCCIIIYPFISESP 262 (521)
Q Consensus 249 ~~~~~~~~~~~esp 262 (521)
+..++..++.||++
T Consensus 461 ~~~i~~~~~~~~~~ 474 (481)
T TIGR00879 461 LGLIFVYFFLPETK 474 (481)
T ss_pred HHHHHHheecccCC
Confidence 88766667777754
No 144
>PRK10054 putative transporter; Provisional
Probab=99.26 E-value=3.7e-10 Score=110.88 Aligned_cols=169 Identities=15% Similarity=0.078 Sum_probs=117.5
Q ss_pred HHHHHHHHHHHHHHHHHHhHHhhc-cCCCccHHHHHH---HHHHHhHhHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHH
Q 039541 329 RRLLTIMALAFGIGVVYFGLLLGV-GNLSFNIYLSLA---FNGLLDIPAYLLTFILIERWSRKSSILTFCILSGTCSAIC 404 (521)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~---~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~i~~~~~ 404 (521)
...+..++..++.......++.++ ++.+.+....+. ...+..+++.++.|+++||+|||+.+.++..+.+++.+.+
T Consensus 11 ~l~~~~~~~~~g~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~~~~~~~~~~~~~~~~~ 90 (395)
T PRK10054 11 ALLASSLLLTIGRGATLPFMTIYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKFDKKRYMLLAITAFASGFIAI 90 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHH
Confidence 334444455555555544444444 556766554443 3445677888999999999999999998888888877777
Q ss_pred HhcCCchHHHHHHHHHHHHHHHHHHHHHHHHhhccccCchhhhhhhHHHHHhhhhhhhHHHHHHHhh-ccchhHHHHHHH
Q 039541 405 VAIGDEQEVLQIGLELASFFSACVAFNVLLVFGTELFTTCVRNSTTSLVRQAVNLGAAFSPVLISAG-RQNEFLSFGVFG 483 (521)
Q Consensus 405 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~~-~~~~~~~~~~~~ 483 (521)
.+.++. +..++...+.+.+.+...+....+..|..|++.|+++.|+.+...++|.+++|.+.++. ..++...|.+.+
T Consensus 91 ~~~~~~--~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l~~~g~~~~f~~~~ 168 (395)
T PRK10054 91 PLVNNV--TLVVLFFALINCAYSVFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLLVMQSINLPFWLAA 168 (395)
T ss_pred HHHhHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcHHHHHH
Confidence 665433 33444444555555666777888999999999999999999999999999999998863 345667777777
Q ss_pred HHHHHHhHhh-hccccC
Q 039541 484 LVVFCFGFFV-VFLPET 499 (521)
Q Consensus 484 ~~~~~~~~~~-~~~~~~ 499 (521)
++.++..+.. +.+++.
T Consensus 169 ~~~~i~~i~~~~~~~~~ 185 (395)
T PRK10054 169 ICSAFPLVFIQIWVQRS 185 (395)
T ss_pred HHHHHHHHHHHHHHhcc
Confidence 6666654433 345444
No 145
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.24 E-value=4.1e-10 Score=112.20 Aligned_cols=153 Identities=12% Similarity=0.026 Sum_probs=115.5
Q ss_pred HHhHHhhccCCCccHHHHH---HHHHHHhHhHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHH
Q 039541 345 YFGLLLGVGNLSFNIYLSL---AFNGLLDIPAYLLTFILIERWSRKSSILTFCILSGTCSAICVAIGDEQEVLQIGLELA 421 (521)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 421 (521)
....|.+.++.+.+..... ....++..++.++.|++.||+|||+.+.++.++.+++.++..+..+. +...+..++
T Consensus 43 ~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~--~~l~~~~~l 120 (434)
T PRK11663 43 NAAMPEMLADLGLSRSDIGLLATLFYITYGVSKFVSGIVSDRSNARYFMGIGLIATGIINILFGFSSSL--WAFALLWVL 120 (434)
T ss_pred HHhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhcCCchhHHHHHHHHHHHHHHHHHHhHH--HHHHHHHHH
Confidence 3446777777777654433 34556777899999999999999999999999998888877665433 445555666
Q ss_pred HHHHHHHHHHHHHHhhccccCchhhhhhhHHHHHhhhhhhhHHHHHHHh--hccchhHHHHHHHHHHHHHhH-hhhcccc
Q 039541 422 SFFSACVAFNVLLVFGTELFTTCVRNSTTSLVRQAVNLGAAFSPVLISA--GRQNEFLSFGVFGLVVFCFGF-FVVFLPE 498 (521)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 498 (521)
.+++.+..++....++.|.+|+++|++++++.+....+|..++|.+.+. ...++...|.+.+++.++..+ ..+.++|
T Consensus 121 ~g~~~g~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~gw~~~f~~~~i~~~~~~~~~~~~~~~ 200 (434)
T PRK11663 121 NAFFQGWGWPVCAKLLTAWYSRTERGGWWAIWNTAHNVGGALIPLVVGAIALHYGWRYGMMIAGIIAIVVGLFLCWRLRD 200 (434)
T ss_pred HHHHHHccchHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 7777777788888999999999999999999999999999999998875 334677777777766554433 3344554
Q ss_pred C
Q 039541 499 T 499 (521)
Q Consensus 499 ~ 499 (521)
+
T Consensus 201 ~ 201 (434)
T PRK11663 201 K 201 (434)
T ss_pred C
Confidence 3
No 146
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.23 E-value=6e-10 Score=107.82 Aligned_cols=155 Identities=12% Similarity=0.038 Sum_probs=119.2
Q ss_pred HHHHHHHHHHHhHH-hhccCCCccH---HHHHHHHHHHhHhHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHhcCCch
Q 039541 336 ALAFGIGVVYFGLL-LGVGNLSFNI---YLSLAFNGLLDIPAYLLTFILIERWSRKSSILTFCILSGTCSAICVAIGDEQ 411 (521)
Q Consensus 336 ~~~~~~~~~~~~~~-~~~~~~~~~~---~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~i~~~~~~~~~~~~ 411 (521)
+..+.........+ .+.++.+.+. ........+...++.++.|+++||+|||+.+..+.++.+++.++..+..+.
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~- 85 (352)
T PF07690_consen 7 LSGFGFSIISPALPLYLAEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRFGRRRVLIIGLLLFALGSLLLAFASNF- 85 (352)
T ss_dssp HHHHHHHHHHHHHH-HHHCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS-HHHHHHHHHHHHHHHHHHHHHHCCH-
T ss_pred HHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeEeehhhhhhhHHHHhhhhhhH-
Confidence 33344444444556 5666766543 344455667788899999999999999999999999998885555443333
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhccccCchhhhhhhHHHHHhhhhhhhHHHHHHHhh--ccchhHHHHHHHHHHHHH
Q 039541 412 EVLQIGLELASFFSACVAFNVLLVFGTELFTTCVRNSTTSLVRQAVNLGAAFSPVLISAG--RQNEFLSFGVFGLVVFCF 489 (521)
Q Consensus 412 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~~--~~~~~~~~~~~~~~~~~~ 489 (521)
+...+..++.|++.+...+....++.|.+|+++|++++++......+|..++|.+.+.. ..++...+.+.+++.++.
T Consensus 86 -~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~ 164 (352)
T PF07690_consen 86 -WLLLIARFLLGIGSGFFSPASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLISYFGWRWAFLISAILSLIA 164 (352)
T ss_dssp -HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHCHHCCHHHHHHHHHHHH
T ss_pred -HHHhhhccccccccccccccccccccccchhhhhhhccccccchhhhhhhcccchhhhhhhccccccccccccchhhhh
Confidence 56778888999999999999999999999999999999999999999999999999874 345667788888877776
Q ss_pred hHh
Q 039541 490 GFF 492 (521)
Q Consensus 490 ~~~ 492 (521)
.++
T Consensus 165 ~il 167 (352)
T PF07690_consen 165 AIL 167 (352)
T ss_dssp HHH
T ss_pred hhh
Confidence 654
No 147
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.22 E-value=8.5e-10 Score=108.56 Aligned_cols=160 Identities=16% Similarity=0.061 Sum_probs=118.1
Q ss_pred HHHHHHHhHHhhccCCCccHHHHH---HHHHHHhHhHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHhcCCchHHHHH
Q 039541 340 GIGVVYFGLLLGVGNLSFNIYLSL---AFNGLLDIPAYLLTFILIERWSRKSSILTFCILSGTCSAICVAIGDEQEVLQI 416 (521)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 416 (521)
+........|.+.++.+.+..... ....++..++.++.|+++||+|||+.+..+..+..++.......++. +...
T Consensus 18 ~~~~~~~~lp~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~i~~~~~~~~~~~--~~~~ 95 (392)
T PRK10473 18 GIDMYLVGLPRIAADLNASEAQLHIAFSVYLAGMAAAMLFAGKIADRSGRKPVAIPGAALFIIASLLCSLAETS--SLFL 95 (392)
T ss_pred HHHHHhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHhCChHHHHHHHHHHHHHHHHHHHhCcH--HHHH
Confidence 334444456777777776654333 34455667788999999999999999999998888888777665443 4555
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccccCchhhhhhhHHHHHhhhhhhhHHHHHHHhh--ccchhHHHHHHHHHHHHHhHh-h
Q 039541 417 GLELASFFSACVAFNVLLVFGTELFTTCVRNSTTSLVRQAVNLGAAFSPVLISAG--RQNEFLSFGVFGLVVFCFGFF-V 493 (521)
Q Consensus 417 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~-~ 493 (521)
+..++.+++.+...+....+..|.+|++.|+++.++.+....++..++|.+.+.. ..++...+.+.+++.++..+. .
T Consensus 96 ~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~~~~g~~~~~~~~~~~~~i~~~~~~ 175 (392)
T PRK10473 96 AGRFLQGIGAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIMLKFPWQSLFYTMAAMGILVLLLSL 175 (392)
T ss_pred HHHHHHHhhhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHHHHHHHHHHHHHHHHHH
Confidence 6667778888888888999999999999999999999999999999999988753 345666677776666555444 3
Q ss_pred hccccCCC
Q 039541 494 VFLPETIG 501 (521)
Q Consensus 494 ~~~~~~~~ 501 (521)
+.++|+++
T Consensus 176 ~~~~~~~~ 183 (392)
T PRK10473 176 FILKETRP 183 (392)
T ss_pred HHcCCCCC
Confidence 45566543
No 148
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.22 E-value=4.1e-11 Score=121.90 Aligned_cols=143 Identities=15% Similarity=0.140 Sum_probs=110.9
Q ss_pred Cccee-eecceeeCCccccchhhHHHHHHHHHHhhhhhhhccccCCCCchHHHHHHHHHHHHHHHHHhcc--ccHHHHHH
Q 039541 101 DTTII-SDWSLECAGSSILSGLPSSCFFIGCLLGGLALSTLGDSSSLGRKKLLFLSCFAMSITALATIFA--NNIWIYST 177 (521)
Q Consensus 101 ~~~i~-~~~~~~~~~~~~~~~~~~s~~~lg~~i~~~~~g~l~dr~~~Grr~~l~~~~~~~~~~~~~~~~~--~~~~~l~~ 177 (521)
+|.+. +++|.+..+. +++.+.+.++..++.++.|+++|| +|||++++.+.++..++.++.... .+.+.+.+
T Consensus 298 lp~~l~~~~g~~~~~~----g~~~~~~~~~~~~g~~~~g~l~dr--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 371 (496)
T PRK03893 298 LPTYLKTDLGYDPHTV----ANVLFFSGFGAAVGCCVGGFLGDW--LGTRKAYVCSLLISQLLIIPVFAIGGANVWVLGL 371 (496)
T ss_pred HHHHHHhhcCCCHHHH----HHHHHHHHHHHHHHHHHHHHHHHH--hcchHHHHHHHHHHHHHHHHHhhccccHHHHHHH
Confidence 34444 5888888666 999999999999999999999999 999999988877777666544433 34444545
Q ss_pred HHHHhhccchhhHhhhhhheeeeecCcchhHHHHHHHHHHHHHHHHHHHH-HHhhcCCchhHHHHHHHHHHHH
Q 039541 178 IRFVAGFFRAPIMTSVIVLLSEMVSKRWRGQVVIIGFTFFSFGLVSLPAV-AYLSRGSSWKMLYVWTSIPSIV 249 (521)
Q Consensus 178 ~r~l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~i~~~i-~~~~~~~~wr~~f~~~~~~~~~ 249 (521)
..++.+.......+...+++.|.+|+++|++++++......+|..+||.+ |.+.+..||+..+.+.+....+
T Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~lgp~l~g~l~~~~g~~~~~~~~~~~~~~ 444 (496)
T PRK03893 372 LLFFQQMLGQGISGLLPKLIGGYFDTEQRAAGLGFTYNVGALGGALAPILGALIAQRLDLGTALASLSFSLTF 444 (496)
T ss_pred HHHHHHHHhcccchhhHHHHHhhCCHHHhhcccchhhhhhhHHHHHHHHHHHHHhccCChHHHHHHHHHHHHH
Confidence 55555444334456677788999999999999999999999999999998 7888888999888665544333
No 149
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.22 E-value=3.5e-10 Score=111.33 Aligned_cols=155 Identities=14% Similarity=0.168 Sum_probs=119.6
Q ss_pred HHHhHHhhccCCCccHH---HHHHHHHHHhHhHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHH
Q 039541 344 VYFGLLLGVGNLSFNIY---LSLAFNGLLDIPAYLLTFILIERWSRKSSILTFCILSGTCSAICVAIGDEQEVLQIGLEL 420 (521)
Q Consensus 344 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 420 (521)
..+..|.+.++.+.+.. .......++..++.++.|++.||+|||+.+..+..+.+++..+..+..+. +...+..+
T Consensus 13 ~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 90 (399)
T TIGR00893 13 LSFAAPMLQEDLGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRFGARKTLAVFIVIWGVFTGLQAFAGAY--VSLYILRV 90 (399)
T ss_pred hhHhHHHHHHhhCCChhhHHHHHHHHHHHHHHHHHhHHHHHHhcCcceeeHHHHHHHHHHHHHHHHHcCH--HHHHHHHH
Confidence 33445666666665543 33445567778899999999999999999999998888888877776544 56777788
Q ss_pred HHHHHHHHHHHHHHHhhccccCchhhhhhhHHHHHhhhhhhhHHHHHHHh--hccchhHHHHHHHHHHHHHhHhh-hccc
Q 039541 421 ASFFSACVAFNVLLVFGTELFTTCVRNSTTSLVRQAVNLGAAFSPVLISA--GRQNEFLSFGVFGLVVFCFGFFV-VFLP 497 (521)
Q Consensus 421 ~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 497 (521)
+.|++.+...+....++.|.+|++.|+++.++......+|..++|.+.+. ...++...+.+.+++.++..+.. +..+
T Consensus 91 l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (399)
T TIGR00893 91 LLGAAEAPFFPGIILIVASWFPASERATAVSIFNSAQGLGGIIGGPLVGWILIHFSWQWAFIIEGVLGIIWGVLWLKFIP 170 (399)
T ss_pred HHHHHHHhhhhHHHHHHHHhCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHhhheec
Confidence 88999888899999999999999999999999999999999999999875 33456777777776666555443 3445
Q ss_pred cCC
Q 039541 498 ETI 500 (521)
Q Consensus 498 ~~~ 500 (521)
+++
T Consensus 171 ~~~ 173 (399)
T TIGR00893 171 DPP 173 (399)
T ss_pred CCC
Confidence 443
No 150
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.22 E-value=5.9e-10 Score=109.38 Aligned_cols=169 Identities=11% Similarity=-0.020 Sum_probs=113.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHhHHhhccCCCccHHH---HHHHHHHHhHhHHHHHHHHHhhcCCchHHHHHHHHHHHHHHH
Q 039541 327 ALRRLLTIMALAFGIGVVYFGLLLGVGNLSFNIYL---SLAFNGLLDIPAYLLTFILIERWSRKSSILTFCILSGTCSAI 403 (521)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~i~~~~ 403 (521)
++...+..++..++........+....+.+.+... ......+...+..++.|+++||+|||+++.++..+.+++.+.
T Consensus 5 f~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~grr~vl~~~~~~~~~~~~~ 84 (393)
T PRK11195 5 FYAIMAAQFFSALADNALLFAAIALLKELHYPDWSQPLLQMFFVLAYIVLAPFVGAFADSFPKGRVMFIANGIKLLGCLL 84 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhccCCchhhHHHHHHHHHHHHH
Confidence 33333333344443443444444445555554433 334455677788899999999999999999999888777666
Q ss_pred HHhcCCchHHHHHHHHHHHHHHHHHHHHHHHHhhccccCchhhhhhhHHHHHhhhhhhhHHHHHHHhhc-cchhHHHHHH
Q 039541 404 CVAIGDEQEVLQIGLELASFFSACVAFNVLLVFGTELFTTCVRNSTTSLVRQAVNLGAAFSPVLISAGR-QNEFLSFGVF 482 (521)
Q Consensus 404 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~~~-~~~~~~~~~~ 482 (521)
+.+..+ ..+..++.|++.+...|...+++.|.+|+++|++++|+......+|..+||.+.|+.. ..+...+.+.
T Consensus 85 ~~~~~~-----~~~~r~l~G~~~a~~~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l~~~~~~~~~~i~ 159 (393)
T PRK11195 85 MLFGIH-----PLLAYGLVGIGAAAYSPAKYGILTELLPGEKLVKANGWMEGSTIAAILLGTVLGGALADPHAEAALAVC 159 (393)
T ss_pred HHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 544321 1445567888888999999999999999999999999999999999999999998632 2233334333
Q ss_pred HHHHHHHhHhhhccccCC
Q 039541 483 GLVVFCFGFFVVFLPETI 500 (521)
Q Consensus 483 ~~~~~~~~~~~~~~~~~~ 500 (521)
+.+.+++.+..+.+||.+
T Consensus 160 ~~~~~~~~~~~~~l~~~~ 177 (393)
T PRK11195 160 ALIYLLAALFNLFIPRLG 177 (393)
T ss_pred HHHHHHHHHHHhcCCCCc
Confidence 433333444445666543
No 151
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.21 E-value=1.1e-10 Score=118.23 Aligned_cols=156 Identities=15% Similarity=0.063 Sum_probs=117.1
Q ss_pred CcceeeecceeeCCccccchhhHHHHHHHHHHhhhhhhhccccCCCCchHHHHHHHHHHHHHHHHHhccc--c-HH-HHH
Q 039541 101 DTTIISDWSLECAGSSILSGLPSSCFFIGCLLGGLALSTLGDSSSLGRKKLLFLSCFAMSITALATIFAN--N-IW-IYS 176 (521)
Q Consensus 101 ~~~i~~~~~~~~~~~~~~~~~~~s~~~lg~~i~~~~~g~l~dr~~~Grr~~l~~~~~~~~~~~~~~~~~~--~-~~-~l~ 176 (521)
.|.+.+++|.+..+. ++......++..++.++.|+++|| +|||++++.+.++.+++.++.+... + .+ ..+
T Consensus 294 ~p~i~~~~g~~~~~~----~~~~~~~~~~~~i~~~~~g~l~dr--~g~r~~~i~~~~~~~v~~~~l~~~~~~~~~~~~~~ 367 (479)
T PRK10077 294 APEIFKTLGASTDIA----LLQTIIVGVINLTFTVLAIMTVDK--FGRKPLQIIGALGMAIGMFSLGTAFYTQAPGIVAL 367 (479)
T ss_pred HHHHHHHcCCCCchH----HHHHHHHHHHHHHHHHHHHHHHHH--hcChHHHHHhHHHHHHHHHHHHHHHhcCcccHHHH
Confidence 467777788876555 666677788889999999999999 9999999999999988887765431 2 11 222
Q ss_pred HHHHHhhccchh-hHhhhhhheeeeecCcchhHHHHHHHHHHHHHHHHHHHH-H------HhhcCCchhHHHHHHHHHHH
Q 039541 177 TIRFVAGFFRAP-IMTSVIVLLSEMVSKRWRGQVVIIGFTFFSFGLVSLPAV-A------YLSRGSSWKMLYVWTSIPSI 248 (521)
Q Consensus 177 ~~r~l~G~~~g~-~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~i~~~i-~------~~~~~~~wr~~f~~~~~~~~ 248 (521)
.+-++.+++.+. ..+....++.|.+|+++|++++++......+|.++++.+ . ++.+..+|++.|++.+++++
T Consensus 368 ~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 447 (479)
T PRK10077 368 LSMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWIANYFVSWTFPMMDKNSWLVAHFHNGFSYWIYGCMGV 447 (479)
T ss_pred HHHHHHHHHHhccccchhHHHhHhhCChhHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccchhhhccCccHHHHHHHHHH
Confidence 333344443332 236678899999999999999999999999888887655 2 23356789999999888878
Q ss_pred HHHhhhceeeecch
Q 039541 249 VCCIIIYPFISESP 262 (521)
Q Consensus 249 ~~~~~~~~~~~esp 262 (521)
+..++.+++.||+.
T Consensus 448 ~~~~~~~~~~~e~~ 461 (479)
T PRK10077 448 LAALFMWKFVPETK 461 (479)
T ss_pred HHHHHHHhccccCC
Confidence 77766677788874
No 152
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=99.21 E-value=1.7e-08 Score=97.48 Aligned_cols=309 Identities=14% Similarity=0.049 Sum_probs=190.3
Q ss_pred hhh-HHHHHHHHHHhhhhhhhccccCCCCchHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHhhccchhhHhhhhhhee
Q 039541 120 GLP-SSCFFIGCLLGGLALSTLGDSSSLGRKKLLFLSCFAMSITALATIFANNIWIYSTIRFVAGFFRAPIMTSVIVLLS 198 (521)
Q Consensus 120 ~~~-~s~~~lg~~i~~~~~g~l~dr~~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~ 198 (521)
|.. .++-+....++.++.+.+.|+ .|.|..+.++...+....+..-+ .|-+.+++.-.+.|+|.+..+..--.|++
T Consensus 52 Gy~~~aiiY~~ftv~~l~~psiv~~--i~~K~~lv~ga~~y~~f~~gfl~-~N~y~~yfssallG~Gaallw~GqG~ylt 128 (461)
T KOG3098|consen 52 GYYGQAIIYAFFTVSCLFAPSIVNF--LGPKWALVIGATCYAAFPLGFLF-PNSYYLYFSSALLGFGAALLWTGQGGYLT 128 (461)
T ss_pred cHHHHHHHHHHHHHHHHhhHHHHHH--hhHHHHHHHHhHHHHHHHHHHHh-cchHHHHHHHHHhhhhHHheecccceehh
Confidence 444 677788888999999999999 99999999999999887777655 55677889999999999999999999999
Q ss_pred eeecCcchhHHHHHHHHHHHHHHHHHHHHHHhhc---------CCchh--------------HHHHHHHHHHHHHHhhhc
Q 039541 199 EMVSKRWRGQVVIIGFTFFSFGLVSLPAVAYLSR---------GSSWK--------------MLYVWTSIPSIVCCIIIY 255 (521)
Q Consensus 199 ~~~~~~~rg~~~~~~~~~~~~G~~i~~~i~~~~~---------~~~wr--------------~~f~~~~~~~~~~~~~~~ 255 (521)
|..+++.+.+..++.......+.++|..+-.... ..+-+ ..+.+...+..+.. ...
T Consensus 129 ~~st~~tie~Nisi~Wai~~~~li~Ggi~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~~~~~l~~-i~~ 207 (461)
T KOG3098|consen 129 SNSTRETIERNISIFWAIGQSSLIIGGIILFIYFQFSSSSAIITDGTRRLVFEVLFIDFEIKVLFGVLLAISVLSI-INF 207 (461)
T ss_pred hcCChhhHHHHHHHHHHHHHHHHHhhhHhheeeeEecccccccccchhhhhcchhhhhHHHHHHHHHHHHHHHHHh-hhe
Confidence 9999999999999998888888888866632211 11111 11111111111111 222
Q ss_pred eeeecchhHHHhcCCHHHHHHHHHHHhhhcCCCCCCCccccccCCCCCccccCCCcccccccHHHHhccHHHHHHHHHHH
Q 039541 256 PFISESPRWLFIHGHEAEAMAVLKRLASRSNYQSDYGLESCCLSNMPPKAKNVIPKLDLYSSLKDLFNRKWALRRLLTIM 335 (521)
Q Consensus 256 ~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 335 (521)
.++|.... ...+...+ .... +......+++++++.........
T Consensus 208 ~~~p~~~~-~~~~~~~~---~~~~---------------------------------~~l~~~~~l~~~~~ml~L~~~f~ 250 (461)
T KOG3098|consen 208 DFLPSKDV-VNCKSSSE---TSFS---------------------------------ELLKLTFKLLKTPKMLLLFPFFF 250 (461)
T ss_pred eecCccch-hhhhhhcc---ccHH---------------------------------HHHHHHHHHhcCHhHHHHHHHHH
Confidence 23332110 00000000 0000 00013345566666443333322
Q ss_pred HHHHHHHHHHHhHHhhc--c-CCCcc----HHHHHHHHHHHhHhHHHHHHHHHhh---cCCchHHHHHHHHHHHHHHHHH
Q 039541 336 ALAFGIGVVYFGLLLGV--G-NLSFN----IYLSLAFNGLLDIPAYLLTFILIER---WSRKSSILTFCILSGTCSAICV 405 (521)
Q Consensus 336 ~~~~~~~~~~~~~~~~~--~-~~~~~----~~~~~~~~~~~~~~~~~~~g~l~dr---~g~~~~~~~~~~~~~i~~~~~~ 405 (521)
..++...+..-..|.-+ . ..+.+ ........+++.+.+....+.+.+| +|+++++.++..+..+..++..
T Consensus 251 ~tG~~~Sf~~~iypt~i~ft~~~~~n~~~~~ai~~~~~g~g~v~~g~~~~~l~~rir~fg~~~~~~~~~~~~~~~~~li~ 330 (461)
T KOG3098|consen 251 YTGLETSFWISIYPTCISFTRKLGSNTTYLIAIYSIGIGLGEVIGGLDFSILSKRIRGFGRKPTVLIGIIIHLIGFLLIH 330 (461)
T ss_pred HHHHHHHHHHhccchhhhhhhhccCcchhHHHHHHHHHhHHHHHHHHHHHHHhhhhhhcccCcchhHHHHHHHHHHHHHh
Confidence 22222221111111111 1 11211 2333455667777777777777765 6788888888887777776665
Q ss_pred hcCCc-h---------------HHHHHHHHHHHHHHHHHHHHHHHHhhccccCchhhhhhhHHHHHhhhhhhhHHHHHHH
Q 039541 406 AIGDE-Q---------------EVLQIGLELASFFSACVAFNVLLVFGTELFTTCVRNSTTSLVRQAVNLGAAFSPVLIS 469 (521)
Q Consensus 406 ~~~~~-~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~ 469 (521)
+.... . .....+..++.|++-.......+.++...+ ++.|..+.++...-..++..++-+...
T Consensus 331 l~~p~dap~~~t~~~~~~~~~~~~~~~ii~~l~G~~D~~~~t~~~~ii~~~~-~~~~~~~fsi~kfyq~~~s~v~~f~~~ 409 (461)
T KOG3098|consen 331 LSFPNDAPLRPTDSPPLLFTPSYYLALIIGFLLGFGDACFNTQRYVIIALLY-PDDRAQAFSLFKFYQSVASCVAFFFSP 409 (461)
T ss_pred ccccccCCCCCCcccccccccchhHHHHHHHHHhhHHHHHHHHHHHHHHHHh-cCchHHHHHHHHHHHHHHHHHHhhhhh
Confidence 43211 0 135667777888888888888899999998 556688888888777777666555544
Q ss_pred h
Q 039541 470 A 470 (521)
Q Consensus 470 ~ 470 (521)
.
T Consensus 410 ~ 410 (461)
T KOG3098|consen 410 Y 410 (461)
T ss_pred h
Confidence 3
No 153
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.21 E-value=1.3e-10 Score=114.66 Aligned_cols=143 Identities=13% Similarity=0.115 Sum_probs=111.4
Q ss_pred CcceeeecceeeCCccccchhhHHHHHHHHHHhhhhhhhccccCCCCchHHHH-HHHHHHHHHHHHHh-----ccccHHH
Q 039541 101 DTTIISDWSLECAGSSILSGLPSSCFFIGCLLGGLALSTLGDSSSLGRKKLLF-LSCFAMSITALATI-----FANNIWI 174 (521)
Q Consensus 101 ~~~i~~~~~~~~~~~~~~~~~~~s~~~lg~~i~~~~~g~l~dr~~~Grr~~l~-~~~~~~~~~~~~~~-----~~~~~~~ 174 (521)
.|.+.+++|.+..+. +++.+...++..++.++.|+++|| +|||+.+. .+.+..+++.+... ..++.+.
T Consensus 245 ~p~~~~~~g~s~~~~----~~~~~~~~~~~~ig~~~~g~l~dr--~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~ 318 (402)
T TIGR00897 245 LPMFVAELGFSTSEW----LQIWGTFFFTNIVFNVIFGIVGDK--LGWMNTVRWFGGVGCGIFTLALYYIPQHFGHSFAV 318 (402)
T ss_pred HHHHHHHcCCChhHH----HHHHHHHHHHHHHHHHHHHHHHHh--hcchhHHHHHHHHHHHHHHHHHHHHHHccCCcHHH
Confidence 455557788888666 888899999999999999999999 99988764 33333344333322 2356777
Q ss_pred HHHHHHHhhccchhhHhhhhhheeeeecCcchhHHHHHHHHHHHHHHHHHHHH-HHhhcCCchhHHHHHHHHHHHHHH
Q 039541 175 YSTIRFVAGFFRAPIMTSVIVLLSEMVSKRWRGQVVIIGFTFFSFGLVSLPAV-AYLSRGSSWKMLYVWTSIPSIVCC 251 (521)
Q Consensus 175 l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~i~~~i-~~~~~~~~wr~~f~~~~~~~~~~~ 251 (521)
+++..++.|++.+...+. ...+.|.. +++||++.|+.+....+|..++|.+ +.+.+..||+..+++.++..++..
T Consensus 319 ~~~~~~~~G~~~~~~~~~-~~~~~~~~-~~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~g~~~~~~~~a~~~~i~~ 394 (402)
T TIGR00897 319 ALIIAIALGIFLAGYVPL-AAVFPTLA-PKHKGAAMSVLNLSAGLSAFLAPAIAVLFIGFFGAIGVVWIFAALYVVSA 394 (402)
T ss_pred HHHHHHHHHHHHHHHHHH-HHHHHhhC-cchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHH
Confidence 788899999988876554 45566764 4689999999999999999999988 788888899999999888877766
No 154
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.21 E-value=3.1e-11 Score=118.78 Aligned_cols=139 Identities=12% Similarity=0.073 Sum_probs=109.3
Q ss_pred eeeecceeeCCccccchhhHHHHHHHHHHhhhhhhhccccCCCCchHHHHHHHHHHHHHH--HHHhc--cccHHHHHHHH
Q 039541 104 IISDWSLECAGSSILSGLPSSCFFIGCLLGGLALSTLGDSSSLGRKKLLFLSCFAMSITA--LATIF--ANNIWIYSTIR 179 (521)
Q Consensus 104 i~~~~~~~~~~~~~~~~~~~s~~~lg~~i~~~~~g~l~dr~~~Grr~~l~~~~~~~~~~~--~~~~~--~~~~~~l~~~r 179 (521)
++++++.+.++. +.+.+...++..++.++.|+++|| +|||+.+.....+..+.. +...+ .++.+.+++..
T Consensus 246 ~~~~~g~~~~~~----~~~~~~~~~~~~~~~~~~g~l~dr--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (394)
T TIGR00883 246 LTQTLGLSANSA----LLVLMLSLILFFITIPLSGALSDR--IGRRPVLIIFTVLAALLAVPLLMALLDSGSFTLFFFLV 319 (394)
T ss_pred HHHhcCCChhHH----HHHHHHHHHHHHHHHHHHHHHHHH--hchHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHH
Confidence 346778887665 888999999999999999999999 999998876554444333 22222 25677778888
Q ss_pred HHhhccchhhHhhhhhheeeeecCcchhHHHHH-HHHHHHHHHHHHHHH-HHhhcCCc-hhHHHHHHHHHHH
Q 039541 180 FVAGFFRAPIMTSVIVLLSEMVSKRWRGQVVII-GFTFFSFGLVSLPAV-AYLSRGSS-WKMLYVWTSIPSI 248 (521)
Q Consensus 180 ~l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~-~~~~~~~G~~i~~~i-~~~~~~~~-wr~~f~~~~~~~~ 248 (521)
++.|++.+...+...+++.|.+|+++|+++.++ .+.+..+|..++|.+ +.+.+..| |+..++......+
T Consensus 320 ~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~p~~~g~l~~~~g~~~~~~~~~~~~~l 391 (394)
T TIGR00883 320 LGLALIGGMYTGPMGSFLPELFPTEVRYTGASLAYNLAGAIFGGFAPYIAAALVAMTGDWYAIGYYLAALAL 391 (394)
T ss_pred HHHHHHHHHHhhhHHHHHHHhCCccceeeEeeehhHhHHHHHhhHHHHHHHHHHHHcCcchhHHHHHHHHHH
Confidence 999999988999999999999999999999998 456667888899988 67777777 8887776665444
No 155
>PRK09952 shikimate transporter; Provisional
Probab=99.20 E-value=2.2e-10 Score=114.17 Aligned_cols=151 Identities=14% Similarity=0.139 Sum_probs=108.5
Q ss_pred eeeecceeeCCccccchhhHHHHHHHHHHhhhhhhhccccCCCCchHHHHHHHHHHHHHHHHHhc---c-ccHHHHHHHH
Q 039541 104 IISDWSLECAGSSILSGLPSSCFFIGCLLGGLALSTLGDSSSLGRKKLLFLSCFAMSITALATIF---A-NNIWIYSTIR 179 (521)
Q Consensus 104 i~~~~~~~~~~~~~~~~~~~s~~~lg~~i~~~~~g~l~dr~~~Grr~~l~~~~~~~~~~~~~~~~---~-~~~~~l~~~r 179 (521)
+.+++|.+.+.. ..+.....+...++.++.|+++|| +|||++++.+.++..++.+.... . ++.+.+++..
T Consensus 277 ~~~~~g~s~~~~----~~~~~~~g~~~~i~~~~~g~l~Dr--~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (438)
T PRK09952 277 STQNLGLPRELF----LNIGLLVGGLSCLTIPCFAWLADR--FGRRRVYITGALIGTLSAFPFFMALEAQSIFWIVFFSI 350 (438)
T ss_pred HHHhcCCCHHHH----HHHHHHHHHHHHHHHHHHHHHHHH--hCchHHHHHHHHHHHHHHHHHHHHHHcCChHHHHHHHH
Confidence 445667666333 444455566677888999999999 99999998887766555433322 2 3355555667
Q ss_pred HHhhccchhhHhhhhhheeeeecCcchhHHHHHHH-HHHHHHHHHHHHH-HHhhcC--CchhHHHHHHHHHHHHHHhhhc
Q 039541 180 FVAGFFRAPIMTSVIVLLSEMVSKRWRGQVVIIGF-TFFSFGLVSLPAV-AYLSRG--SSWKMLYVWTSIPSIVCCIIIY 255 (521)
Q Consensus 180 ~l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~-~~~~~G~~i~~~i-~~~~~~--~~wr~~f~~~~~~~~~~~~~~~ 255 (521)
++.|++.+...+...+++.|.+|++.|+.+.++.. .+..+|..++|.+ +++.+. .+|+.++.+.++..++.. +..
T Consensus 351 ~l~~~~~~~~~~~~~~~~~e~~p~~~r~tg~g~~~~~~~~lgg~~~p~i~g~l~~~~~~~~~~~~~~~~~~~~i~~-v~~ 429 (438)
T PRK09952 351 MLANIAHDMVVCVQQPMFTEMFGASYRYSGAGVGYQVASVVGGGFTPFIAAALVTYFGGSWHSVAIYLLAGCLISA-MTA 429 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCcchhHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHH-HHH
Confidence 77788888888888999999999999998888854 4455788888888 666552 358888888877777776 444
Q ss_pred eeeecc
Q 039541 256 PFISES 261 (521)
Q Consensus 256 ~~~~es 261 (521)
+.++|+
T Consensus 430 ~~~~~~ 435 (438)
T PRK09952 430 LLMKDN 435 (438)
T ss_pred HHcccc
Confidence 455664
No 156
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.20 E-value=1.6e-09 Score=106.43 Aligned_cols=150 Identities=13% Similarity=0.024 Sum_probs=115.1
Q ss_pred HHhhccCCCccHHHHH---HHHHHHhHhHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHH
Q 039541 348 LLLGVGNLSFNIYLSL---AFNGLLDIPAYLLTFILIERWSRKSSILTFCILSGTCSAICVAIGDEQEVLQIGLELASFF 424 (521)
Q Consensus 348 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 424 (521)
.|.+.++.+.+..... ....++..++.++.|++.||+|||+.+..+..+.+++.+...+.++. +..++.-++.|+
T Consensus 43 l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~--~~l~~~r~l~G~ 120 (394)
T PRK10213 43 LTPMAQDLGISEGVAGQSVTVTAFVAMFASLFITQTIQATDRRYVVILFAVLLTLSCLLVSFANSF--SLLLIGRACLGL 120 (394)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcHHHHHHHHHHHHHHHHHHHHHChH--HHHHHHHHHHHH
Confidence 3445566676654433 34556777889999999999999999999999999888777665433 667777788899
Q ss_pred HHHHHHHHHHHhhccccCchhhhhhhHHHHHhhhhhhhHHHHHHHhh--ccchhHHHHHHHHHHHHHhHhh-hccccC
Q 039541 425 SACVAFNVLLVFGTELFTTCVRNSTTSLVRQAVNLGAAFSPVLISAG--RQNEFLSFGVFGLVVFCFGFFV-VFLPET 499 (521)
Q Consensus 425 ~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 499 (521)
+.+...+....++.|.+|+++|+.+.++......+|..++|.+.+.. ..++...|.+.+++.++..+.. ...||.
T Consensus 121 ~~g~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~l~~~~~l~~~~~~p~~ 198 (394)
T PRK10213 121 ALGGFWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPLGSFLGELIGWRNVFNAAAVMGVLCIFWIIKSLPSL 198 (394)
T ss_pred hhHHHHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHCCCC
Confidence 98888999999999999999999999999999999999999999863 3456677776666555443332 234553
No 157
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.20 E-value=1.5e-09 Score=107.30 Aligned_cols=156 Identities=13% Similarity=0.042 Sum_probs=120.3
Q ss_pred HHHhHHhhccCCCccHHHHH---HHHHHHhHhHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHH
Q 039541 344 VYFGLLLGVGNLSFNIYLSL---AFNGLLDIPAYLLTFILIERWSRKSSILTFCILSGTCSAICVAIGDEQEVLQIGLEL 420 (521)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 420 (521)
..+..+.+.++++.+..... ....++..++.+..|++.||+|||+.+..+.++.+++.+...+.++. +.+++.-+
T Consensus 27 ~~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~~--~~l~~~r~ 104 (412)
T TIGR02332 27 IGFAGLTMGKDLGLSATMFGLAATLFYAAYVICGIPSNIMLAIIGARRWIAGIMVLWGIASTATMFATGP--ESLYLLRI 104 (412)
T ss_pred HHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhcCH--HHHHHHHH
Confidence 33445666677776654443 44446667788999999999999999999999999888888776554 56677778
Q ss_pred HHHHHHHHHHHHHHHhhccccCchhhhhhhHHHHHhhhhhhhHHHHHHHhh--------ccchhHHHHHHHHHHHHHhH-
Q 039541 421 ASFFSACVAFNVLLVFGTELFTTCVRNSTTSLVRQAVNLGAAFSPVLISAG--------RQNEFLSFGVFGLVVFCFGF- 491 (521)
Q Consensus 421 ~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~~--------~~~~~~~~~~~~~~~~~~~~- 491 (521)
+.|++.+...+....++.|.+|+++|+++.++.+....+|..++|.+.++. ..++...|.+.++..++..+
T Consensus 105 l~G~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~gwr~~f~~~~~~~l~~~~~ 184 (412)
T TIGR02332 105 LVGIAEAGFLPGILLYLTFWFPAYFRARANALFMIAMPVTMALGLILSGYILALDGLMALKGWQWLFLLEGFPSVILGVM 184 (412)
T ss_pred HHHHHHhhHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCccchhHHHHHHHHHHHHHHHH
Confidence 889998888888889999999999999999999999999999999888752 13677888887776655443
Q ss_pred hhhccccCCC
Q 039541 492 FVVFLPETIG 501 (521)
Q Consensus 492 ~~~~~~~~~~ 501 (521)
.++++||+++
T Consensus 185 ~~~~~~~~p~ 194 (412)
T TIGR02332 185 TWFWLDDSPD 194 (412)
T ss_pred HhhccCCCcc
Confidence 4456676553
No 158
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.19 E-value=6.2e-11 Score=117.18 Aligned_cols=135 Identities=19% Similarity=0.179 Sum_probs=111.0
Q ss_pred ceeeecceeeCCccccchhhHHHHHHHHHHhhhhhhhccccCCCCchHHHHHHHHHHHHHHH-HHhccccHHHHHHHHHH
Q 039541 103 TIISDWSLECAGSSILSGLPSSCFFIGCLLGGLALSTLGDSSSLGRKKLLFLSCFAMSITAL-ATIFANNIWIYSTIRFV 181 (521)
Q Consensus 103 ~i~~~~~~~~~~~~~~~~~~~s~~~lg~~i~~~~~g~l~dr~~~Grr~~l~~~~~~~~~~~~-~~~~~~~~~~l~~~r~l 181 (521)
.+.+++|.+..+. +++.+...++..++.++.|+++|| +|||+.+.++.++.++..+ +....++.+.+.+..++
T Consensus 264 ~~~~~~g~s~~~~----~~~~~~~~~~~~~g~~~~g~l~dr--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (405)
T TIGR00891 264 YLKADLGLSPHTV----ANIVVFSNIGAIVGGCVFGFLGDW--LGRRKAYVCSLLAGQLLIIPVFAIGANVAVLGLGLFF 337 (405)
T ss_pred HHHHHhCCCHHHH----HHHHHHHHHHHHHHHHHHHHHHHH--hCchhhhHHHHHHHHHHHHHHHHhCCchHHHHHHHHH
Confidence 3456788888666 999999999999999999999999 9999999888776543332 33445677777777788
Q ss_pred hhccchhhHhhhhhheeeeecCcchhHHHHHHHHHHHHHHHHHHHH-HHhhcCCc-hhHHHHHH
Q 039541 182 AGFFRAPIMTSVIVLLSEMVSKRWRGQVVIIGFTFFSFGLVSLPAV-AYLSRGSS-WKMLYVWT 243 (521)
Q Consensus 182 ~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~i~~~i-~~~~~~~~-wr~~f~~~ 243 (521)
.|++.+...+...+++.|.+|+++|++++|+.+....+|..++|++ |.+.+..| |+..+...
T Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~~~g~~~~~~~~~ 401 (405)
T TIGR00891 338 QQMLVQGIWGILPKHLGEYFPTDQRAAGLGFTYQLGNLGGALAPIIGALLAQRLDEYGTALASL 401 (405)
T ss_pred HHHHHccchhhHHHHHhhhCCcchhHHHhhHHHHHHHHHHHHHHHHHHHHHHhccccchhHHhh
Confidence 8877777778888899999999999999999999999999999998 78888777 87766553
No 159
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.19 E-value=1e-09 Score=107.75 Aligned_cols=153 Identities=16% Similarity=0.093 Sum_probs=117.2
Q ss_pred hHHhhccCCCccHHHHH---HHHHHHhHhHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHH
Q 039541 347 GLLLGVGNLSFNIYLSL---AFNGLLDIPAYLLTFILIERWSRKSSILTFCILSGTCSAICVAIGDEQEVLQIGLELASF 423 (521)
Q Consensus 347 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 423 (521)
..|.+.++.+.+..... ....++..++.++.|++.||+|||+.+..+..+..++.+.....++. +...+..++.+
T Consensus 27 ~~p~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~g 104 (385)
T TIGR00710 27 AFPEIAADLSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRRPVLLLGLFIFALSSLGLALSNNI--ETLLVLRFVQA 104 (385)
T ss_pred cHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHHHccH--HHHHHHHHHHH
Confidence 34666677776554333 44556778889999999999999999999998888888877765543 56666778888
Q ss_pred HHHHHHHHHHHHhhccccCchhhhhhhHHHHHhhhhhhhHHHHHHHhh--ccchhHHHHHHHHHHHHHhHhh-hccccCC
Q 039541 424 FSACVAFNVLLVFGTELFTTCVRNSTTSLVRQAVNLGAAFSPVLISAG--RQNEFLSFGVFGLVVFCFGFFV-VFLPETI 500 (521)
Q Consensus 424 ~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 500 (521)
++.+...+....+..|.+|+++|+++.++.+....+|..++|.+.+.. ..++...+.+.+++.++..+.. +..||++
T Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (385)
T TIGR00710 105 FGASAGSVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYILVWLSWHAIFAFLSLAGILLSALIFFILPETL 184 (385)
T ss_pred cchhHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 888888899999999999999999999999999999999999998762 3456667776666665554443 4456544
Q ss_pred C
Q 039541 501 G 501 (521)
Q Consensus 501 ~ 501 (521)
+
T Consensus 185 ~ 185 (385)
T TIGR00710 185 P 185 (385)
T ss_pred C
Confidence 3
No 160
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.19 E-value=1.3e-10 Score=113.86 Aligned_cols=141 Identities=16% Similarity=0.189 Sum_probs=116.4
Q ss_pred cceeeecceeeCCccccchhhHHHHHHHHHHhhhhhhhccccCCCCchHHHHHHHHHHHHHHHHHhccccHHHHHHHHHH
Q 039541 102 TTIISDWSLECAGSSILSGLPSSCFFIGCLLGGLALSTLGDSSSLGRKKLLFLSCFAMSITALATIFANNIWIYSTIRFV 181 (521)
Q Consensus 102 ~~i~~~~~~~~~~~~~~~~~~~s~~~lg~~i~~~~~g~l~dr~~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l 181 (521)
|.+.++.|.+.++. +++.+...++..+++++.|++.|| +|+|+++..+..+..++.+... . ........++
T Consensus 224 p~~~~~~g~s~~~~----g~~~~~~~~~~~~~~~~~g~l~dr--~~~~~~l~~~~~~~~~~~~~~~--~-~~~~~~~~~l 294 (381)
T PRK03633 224 PLYLNHQGMSDASI----GFWMALLVSAGILGQWPIGRLADR--FGRLLVLRVQVFVVILGSIAML--S-QAAMAPALFI 294 (381)
T ss_pred HHHHHHcCCCHHHH----HHHHHHHHHHHHHHHhhhHHHHHH--cCcHHHHHHHHHHHHHHHHHHh--h-hHHHHHHHHH
Confidence 44445567777555 889999999999999999999999 9999999988888877766543 2 2344557788
Q ss_pred hhccchhhHhhhhhheeeeecCcchhHHHHHHHHHHHHHHHHHHHH-HHhhcCCchhHHHHHHHHHHHHHH
Q 039541 182 AGFFRAPIMTSVIVLLSEMVSKRWRGQVVIIGFTFFSFGLVSLPAV-AYLSRGSSWKMLYVWTSIPSIVCC 251 (521)
Q Consensus 182 ~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~i~~~i-~~~~~~~~wr~~f~~~~~~~~~~~ 251 (521)
.|++.+...|...+++.|..|+++++.+.+.+....++|.++||.+ |.+.++.+|++.|.+.+.+.++..
T Consensus 295 ~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~igp~~~G~l~~~~g~~~~f~~~~~~~l~~~ 365 (381)
T PRK03633 295 LGAAGFTLYPVAMAWACEKVEHHELVAMNQALLLSYTVGSLLGPSFTAMLMQNYSDNLLFIMIASVSFIYL 365 (381)
T ss_pred HHHHHHhHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHH
Confidence 8888777889999999999998888888888888999999999998 788888899999999888877665
No 161
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.19 E-value=1.7e-09 Score=105.97 Aligned_cols=157 Identities=11% Similarity=0.009 Sum_probs=119.9
Q ss_pred HHHHHhHHhhccCCCccHHH---HHHHHHHHhHhHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHhcCCchHHHHHHH
Q 039541 342 GVVYFGLLLGVGNLSFNIYL---SLAFNGLLDIPAYLLTFILIERWSRKSSILTFCILSGTCSAICVAIGDEQEVLQIGL 418 (521)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 418 (521)
......+|.+.++.+.+... ......++..++.++.|++.||+|||+.+..+..+.+++.++..+.++. +.+++.
T Consensus 20 ~~~~~~l~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~l~~~~~~~--~~l~~~ 97 (382)
T PRK10091 20 FGIMGVLTELAHDVGISIPAAGHMISYYALGVVVGAPIIALFSSRYSLKHILLFLVALCVIGNAMFTLSSSY--LMLAIG 97 (382)
T ss_pred HHHHhChHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHHHHHhCcH--HHHHHH
Confidence 33334456666777765433 3455667888999999999999999999999999999988888776554 567777
Q ss_pred HHHHHHHHHHHHHHHHHhhccccCchhhhhhhHHHHHhhhhhhhHHHHHHHhh--ccchhHHHHHHHHHHHHHhHh-hhc
Q 039541 419 ELASFFSACVAFNVLLVFGTELFTTCVRNSTTSLVRQAVNLGAAFSPVLISAG--RQNEFLSFGVFGLVVFCFGFF-VVF 495 (521)
Q Consensus 419 ~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~-~~~ 495 (521)
.++.|++.+...+.......|.+|++.|+.+.++......+|..++|.+.+.. ..++.+.|.+.+++.++..+. ...
T Consensus 98 r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~ 177 (382)
T PRK10091 98 RLVSGFPHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLSQEFSWRYTFLLIAVFNIAVLASIYFW 177 (382)
T ss_pred HHHHHhhhHHHHHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHh
Confidence 78888888888888888899999999999999999888899999998887753 346777777777766554443 345
Q ss_pred cccCC
Q 039541 496 LPETI 500 (521)
Q Consensus 496 ~~~~~ 500 (521)
+||.+
T Consensus 178 lp~~~ 182 (382)
T PRK10091 178 VPDIR 182 (382)
T ss_pred CCCCC
Confidence 66644
No 162
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.18 E-value=2.2e-09 Score=105.67 Aligned_cols=165 Identities=16% Similarity=0.064 Sum_probs=118.9
Q ss_pred HHHHHHHHHHHHHHHhHHh-hccCCCccHHHHHHHHH---HHhHhHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHhc
Q 039541 332 LTIMALAFGIGVVYFGLLL-GVGNLSFNIYLSLAFNG---LLDIPAYLLTFILIERWSRKSSILTFCILSGTCSAICVAI 407 (521)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~---~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~i~~~~~~~~ 407 (521)
...++...+....+..++. +.++.+.+....+...+ +...+..++.|+++||+|||+++..+..+.+++.+.+...
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~g~k~~l~~~~~~~~~~~~~~~~~ 96 (400)
T PRK11646 17 IDNMLVVLGFFVVFPLISIRFVDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADRFGAKPMIVTGMLMRAAGFATMAIA 96 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHhCchHHHHHHHHHHHHHHHHHHHh
Confidence 3344444554444444444 44566777666555444 4445567889999999999999999999999988887765
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHhhccccCchhhhhhhHHHHHhhhhhhhHHHHHHHhh-ccchhHHHHHHHHHH
Q 039541 408 GDEQEVLQIGLELASFFSACVAFNVLLVFGTELFTTCVRNSTTSLVRQAVNLGAAFSPVLISAG-RQNEFLSFGVFGLVV 486 (521)
Q Consensus 408 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~~-~~~~~~~~~~~~~~~ 486 (521)
++. +...+..++.+++.+...+...+++.|.+|++.|+++.|+.+....+|..++|.+.++. ..++...|.+.++..
T Consensus 97 ~~~--~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~~~g~~~~f~~~~~~~ 174 (400)
T PRK11646 97 HEP--WLLWLSCILSGLGGTLFDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLLQYDFRLVCATGAVLF 174 (400)
T ss_pred ccH--HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 433 55666677778777777788889999999999999999999999999999999998863 345566666666655
Q ss_pred HHHhHh-hhcccc
Q 039541 487 FCFGFF-VVFLPE 498 (521)
Q Consensus 487 ~~~~~~-~~~~~~ 498 (521)
++..++ .+..|+
T Consensus 175 ~~~~i~~~~~~~~ 187 (400)
T PRK11646 175 VLAAAFNAWLLPA 187 (400)
T ss_pred HHHHHHHHHhCCc
Confidence 554433 344454
No 163
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.18 E-value=1.9e-10 Score=107.10 Aligned_cols=151 Identities=12% Similarity=0.022 Sum_probs=124.0
Q ss_pred HhHHhhccCCCccHHHHHHH---HHHHhHhHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHH
Q 039541 346 FGLLLGVGNLSFNIYLSLAF---NGLLDIPAYLLTFILIERWSRKSSILTFCILSGTCSAICVAIGDEQEVLQIGLELAS 422 (521)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 422 (521)
...|.+.++.+.+....+.+ ..+.--++.++.|.++||.+.|+.+..+++++++..+++.+.+.. +...++.++.
T Consensus 50 ~a~p~l~e~~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~npr~fm~~gLilsai~nil~Gfs~s~--~~~~~l~~ln 127 (448)
T COG2271 50 LAMPALIEDGGLSKTQLGILGSAFSITYGVSKFVMGVLSDRSNPRYFMAFGLILSAIVNILFGFSPSL--FLFAVLWVLN 127 (448)
T ss_pred hccHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCceeehHHHHHHHHHHHHHhhhhHH--HHHHHHHHHH
Confidence 44577777777765555444 445555889999999999999999999999999999999987733 6788889999
Q ss_pred HHHHHHHHHHHHHhhccccCchhhhhhhHHHHHhhhhhhhHHHHHH--Hh--hccchhHHHHHHHHHHHHHhHhh-hccc
Q 039541 423 FFSACVAFNVLLVFGTELFTTCVRNSTTSLVRQAVNLGAAFSPVLI--SA--GRQNEFLSFGVFGLVVFCFGFFV-VFLP 497 (521)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~--~~--~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 497 (521)
|.+.+..+|.....+..-+|+++||+..++-++..++|+.+.|.+. +. .+.++...|++-++++++..+.. +.++
T Consensus 128 g~fQg~Gwpp~~~~i~~Wfsr~eRG~~~siWn~shNiGGal~~~~~~la~~~~~~~w~~~f~~pgiiaiival~~~~~~r 207 (448)
T COG2271 128 GWFQGMGWPPCARTITHWFSRKERGTWWSIWNTSHNIGGALAPLVALLAFFAFHGGWRAAFYFPGIIAIIVALILLFLLR 207 (448)
T ss_pred HHHhcCCCcHHHHHHHHHcCccccCceEEEehhhhhcccchHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhC
Confidence 9999999999999999999999999999999999999999999888 54 33477888888888887766554 4444
Q ss_pred c
Q 039541 498 E 498 (521)
Q Consensus 498 ~ 498 (521)
+
T Consensus 208 d 208 (448)
T COG2271 208 D 208 (448)
T ss_pred C
Confidence 3
No 164
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.18 E-value=7.2e-10 Score=112.58 Aligned_cols=136 Identities=15% Similarity=0.113 Sum_probs=95.5
Q ss_pred HHHHHHHHHhhhhhhhccccCCCCchHHHHHHHHHHHHHHHHHhcccc----HHHHHHHHHHhhccchhhHhhhhhheee
Q 039541 124 SCFFIGCLLGGLALSTLGDSSSLGRKKLLFLSCFAMSITALATIFANN----IWIYSTIRFVAGFFRAPIMTSVIVLLSE 199 (521)
Q Consensus 124 s~~~lg~~i~~~~~g~l~dr~~~Grr~~l~~~~~~~~~~~~~~~~~~~----~~~l~~~r~l~G~~~g~~~~~~~~~i~~ 199 (521)
.+..++..++.+++++++|| +|||++++++.++.+++.++.++..+ ...+...-+...++..+..+....+..|
T Consensus 342 ~~~~~~~i~g~~~~~~l~dr--~gRR~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E 419 (502)
T TIGR00887 342 IIALAGTVPGYWVTVFLVDI--IGRKPIQLMGFFILTVLFFVLGFAYNHLSTHGFLAIYVLAQFFANFGPNATTFIVPGE 419 (502)
T ss_pred HHHHHHHHHHHHHHHHHhhh--hcchhHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCchhhhhhhc
Confidence 34455667788999999999 99999999888887777666654321 1111111111112222234556677899
Q ss_pred eecCcchhHHHHHHHHHHHHHHHHHHHH-HHhhcC----------CchhHHHHHHHHHHHHHHhhhceeeecch
Q 039541 200 MVSKRWRGQVVIIGFTFFSFGLVSLPAV-AYLSRG----------SSWKMLYVWTSIPSIVCCIIIYPFISESP 262 (521)
Q Consensus 200 ~~~~~~rg~~~~~~~~~~~~G~~i~~~i-~~~~~~----------~~wr~~f~~~~~~~~~~~~~~~~~~~esp 262 (521)
.+|.+.|+++.++.+....+|.+++|.+ +.+.+. .++...|++.++..++.. +..+++||+.
T Consensus 420 ~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-i~~~~lpEt~ 492 (502)
T TIGR00887 420 VFPTRYRSTAHGISAASGKAGAIIGQFGFLYLAQHGDPTKGYPTGIWMGHVLEIFALFMFLGI-LFTLLIPETK 492 (502)
T ss_pred cCchhHHHHHHHHHHHHhhhHHHHHHHHhhhhhccccccccccccccchHHHHHHHHHHHHHH-HHheEeccCC
Confidence 9999999999999999999999999887 666652 345667888887777766 4457789974
No 165
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.17 E-value=2.7e-10 Score=111.88 Aligned_cols=153 Identities=15% Similarity=0.116 Sum_probs=119.9
Q ss_pred cceeeecceeeCCccccchhhHHHHHHHHHHhhhhhhhccccCCCCchHHHHHHHHHHHHHHHHHhccc-cHHHHHHHHH
Q 039541 102 TTIISDWSLECAGSSILSGLPSSCFFIGCLLGGLALSTLGDSSSLGRKKLLFLSCFAMSITALATIFAN-NIWIYSTIRF 180 (521)
Q Consensus 102 ~~i~~~~~~~~~~~~~~~~~~~s~~~lg~~i~~~~~g~l~dr~~~Grr~~l~~~~~~~~~~~~~~~~~~-~~~~l~~~r~ 180 (521)
|.+.+++|.+.++. |...+.+.++..++.++.|++.|| +|||+.+..+..+..++.++....+ +...+ .-+
T Consensus 229 p~~l~~~g~s~~~a----g~~~~~~~i~~i~g~~~~g~l~~r--~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~--~~~ 300 (393)
T PRK09705 229 PAFYIEIGASAQYS----GSLLALMTLGQAAGALLMPAMARH--QDRRKLLMLALVLQLVGFCGFIWLPLQLPVL--WAM 300 (393)
T ss_pred HHHHHHcCCChhhh----hHHHHHHHHHHHHHHHHHHHHHhh--ccchHHHHHHHHHHHHHHHHHHHccchHHHH--HHH
Confidence 44445678888776 999999999999999999999999 9999999998888877776654333 32222 234
Q ss_pred HhhccchhhHhhhhhheeeeec-CcchhHHHHHHHHHHHHHHHHHHHH-HHhhcCCc-hhHHHHHHHHHHHHHHhhhcee
Q 039541 181 VAGFFRAPIMTSVIVLLSEMVS-KRWRGQVVIIGFTFFSFGLVSLPAV-AYLSRGSS-WKMLYVWTSIPSIVCCIIIYPF 257 (521)
Q Consensus 181 l~G~~~g~~~~~~~~~i~~~~~-~~~rg~~~~~~~~~~~~G~~i~~~i-~~~~~~~~-wr~~f~~~~~~~~~~~~~~~~~ 257 (521)
+.|++.+...+.......+..+ +++|++..++.+....++..++|.+ |++.+..| |+..|++.++..++..+....+
T Consensus 301 l~g~g~g~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~gp~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 380 (393)
T PRK09705 301 VCGLGLGGAFPLCLLLALDHSVQPAIAGKLVAFMQGIGFIIAGLAPWFSGVLRSISGNYLMDWAFHALCVVGLMIITLRF 380 (393)
T ss_pred HHHHhccchHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHh
Confidence 6688888888877766667774 5789999999999999999999988 77777654 8888888888777777666777
Q ss_pred eecch
Q 039541 258 ISESP 262 (521)
Q Consensus 258 ~~esp 262 (521)
.||++
T Consensus 381 ~~~~~ 385 (393)
T PRK09705 381 APARF 385 (393)
T ss_pred ccccc
Confidence 78765
No 166
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.16 E-value=1.3e-09 Score=108.88 Aligned_cols=116 Identities=21% Similarity=0.201 Sum_probs=99.1
Q ss_pred chhhHHHHHHHHHHhhhhhhhccccCCCCchHHHHHHHHHHHHHHHHHhcc-ccHHHHHHHHHHhhccchhhHhhhhhhe
Q 039541 119 SGLPSSCFFIGCLLGGLALSTLGDSSSLGRKKLLFLSCFAMSITALATIFA-NNIWIYSTIRFVAGFFRAPIMTSVIVLL 197 (521)
Q Consensus 119 ~~~~~s~~~lg~~i~~~~~g~l~dr~~~Grr~~l~~~~~~~~~~~~~~~~~-~~~~~l~~~r~l~G~~~g~~~~~~~~~i 197 (521)
.+++.+...++..++.+++++++|| +|+|+++.++.++.+++.++..+. ++.+.+++..++.|++.+...+...+++
T Consensus 259 ~~~~~~~~~i~~ii~~~~~~~l~~r--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 336 (437)
T TIGR00792 259 FSYMGSIAIVAGLIGVLLFPRLVKK--FGRKILFAGGILLMVLGYLIFFFAGSNLPLILVLIILAGFGQNFVTGLVWALV 336 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH--hCcHHHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3778888899999999999999999 999999999999888888777665 4667778888999999999999999999
Q ss_pred eeeec-------CcchhHHHHHHHHHHHHHHHHHHHH-HHhhcCCch
Q 039541 198 SEMVS-------KRWRGQVVIIGFTFFSFGLVSLPAV-AYLSRGSSW 236 (521)
Q Consensus 198 ~~~~~-------~~~rg~~~~~~~~~~~~G~~i~~~i-~~~~~~~~w 236 (521)
+|..+ ++++|.+.++.+....+|..+++.+ +.+.+..||
T Consensus 337 ~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg~~i~g~ll~~~G~ 383 (437)
T TIGR00792 337 ADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQALAGFLVGLILGIIGY 383 (437)
T ss_pred hhhhhhhhhhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 98865 4568999999999999999999888 666654444
No 167
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.16 E-value=1.4e-09 Score=108.37 Aligned_cols=140 Identities=7% Similarity=0.026 Sum_probs=109.3
Q ss_pred HHHHHhHHhhccCCCccHHH---HHHHHHHHhHhHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHhcCCchHHHHHHH
Q 039541 342 GVVYFGLLLGVGNLSFNIYL---SLAFNGLLDIPAYLLTFILIERWSRKSSILTFCILSGTCSAICVAIGDEQEVLQIGL 418 (521)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 418 (521)
....+..+.+.++.+.+... ......++..++.++.|+++||+|||+.+..+.++.+++.++..+..+. +...+.
T Consensus 35 ~~~~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~--~~l~~~ 112 (426)
T PRK12307 35 MLIFYIMYLIKADLGLTDMEGAFLATAAFIGRPFGGALFGLLADKFGRKPLMMWSIVAYSVGTGLSGLASGV--IMLTLS 112 (426)
T ss_pred HHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhHH--HHHHHH
Confidence 34455566666677655433 3344557778899999999999999999999999999988877765543 567777
Q ss_pred HHHHHHHHHHHHHHHHHhhccccCchhhhhhhHHHHHhhhhhhhHHHHHHHhh--ccchhHHHHHHH
Q 039541 419 ELASFFSACVAFNVLLVFGTELFTTCVRNSTTSLVRQAVNLGAAFSPVLISAG--RQNEFLSFGVFG 483 (521)
Q Consensus 419 ~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~~--~~~~~~~~~~~~ 483 (521)
-++.|++.+..++....++.|.+|++.|+++.++......+|.+++|.+.+.. ..++...+.+..
T Consensus 113 r~l~G~g~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~l~~~l~~~~~w~~~f~i~~ 179 (426)
T PRK12307 113 RFIVGMGMAGEYACASTYAVESWPKHLKSKASAFLVSGFGIGNIIAAYFMPSFAEAYGWRAAFFVGL 179 (426)
T ss_pred HHHHHHHHhhHHHHHHHHHHHhCCHhHhhHhhhHHHHHHhHHHHHHHHHHHHHcccCCHHHHHHHHH
Confidence 78888888888999999999999999999999999998899999998887652 235556665533
No 168
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.15 E-value=4.6e-09 Score=105.75 Aligned_cols=147 Identities=14% Similarity=0.058 Sum_probs=102.2
Q ss_pred HHhhccCCCccHHHH---HHHHHHHhHhHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHH
Q 039541 348 LLLGVGNLSFNIYLS---LAFNGLLDIPAYLLTFILIERWSRKSSILTFCILSGTCSAICVAIGDEQEVLQIGLELASFF 424 (521)
Q Consensus 348 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 424 (521)
.+.+.++++.+.... .....++..++.++.|+++||+|||+.+..+.++.+++.++..+..+. +..++..++.|+
T Consensus 59 ~~~l~~~~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~s~--~~l~~~r~l~G~ 136 (476)
T PLN00028 59 LPIIRDNLNLTKSDIGNAGIASVSGSIFSRLAMGPVCDLYGPRYGSAFLLMLTAPAVFCMSLVSSA--TGFIAVRFFIGF 136 (476)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHhcCH--HHHHHHHHHHHH
Confidence 455666777654333 334446677888999999999999999999888888887777665443 344455566676
Q ss_pred HHHHHHHHHHHhhccccCchhhhhhhHHHHHhhhhhhhHHHHHHHhh-----------ccchhHHHHHHHHHHHHHhHhh
Q 039541 425 SACVAFNVLLVFGTELFTTCVRNSTTSLVRQAVNLGAAFSPVLISAG-----------RQNEFLSFGVFGLVVFCFGFFV 493 (521)
Q Consensus 425 ~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~ 493 (521)
+.+.. .....++.|.+|++.|+.+.|+.+....+|..+++.+.+.. ..++...|.+.+++.++..+..
T Consensus 137 ~~~~~-~~~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~gWr~~f~i~g~l~l~~~l~~ 215 (476)
T PLN00028 137 SLATF-VSCQYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQLLMPLVFPLIKDAGAPSFTAWRIAFFVPGLLHIIMGILV 215 (476)
T ss_pred HHHhh-HHHHHHHHHhcChhheeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHHHHHHHHHH
Confidence 66543 33455788999999999999999887777777665544321 1257778888887776665554
Q ss_pred hccc
Q 039541 494 VFLP 497 (521)
Q Consensus 494 ~~~~ 497 (521)
++++
T Consensus 216 ~~~~ 219 (476)
T PLN00028 216 LTLG 219 (476)
T ss_pred HHHc
Confidence 4443
No 169
>PRK03699 putative transporter; Provisional
Probab=99.15 E-value=1.8e-10 Score=113.24 Aligned_cols=149 Identities=13% Similarity=0.081 Sum_probs=124.0
Q ss_pred eeeecceeeCCccccchhhHHHHHHHHHHhhhhhhhccccCCCCchHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHhh
Q 039541 104 IISDWSLECAGSSILSGLPSSCFFIGCLLGGLALSTLGDSSSLGRKKLLFLSCFAMSITALATIFANNIWIYSTIRFVAG 183 (521)
Q Consensus 104 i~~~~~~~~~~~~~~~~~~~s~~~lg~~i~~~~~g~l~dr~~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G 183 (521)
+++++|++..+. +++.+.+.++..++.++.|+++|| +|||+.+.....+..+..++....++.+.+.+..++.|
T Consensus 232 l~~~~g~s~~~~----~~~~~~~~~~~~ig~~~~g~l~dr--~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G 305 (394)
T PRK03699 232 AQKKFGMSLEDA----GNLVSNFWMAYMVGMWIFSFIVRF--FDLQRILTVLAGLALVLMYLFVNTDDPSHLLYAILGLG 305 (394)
T ss_pred HHHHcCCChHHh----hHHHHHHHHHHHHHHHHHHHHHHH--hchhhHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHH
Confidence 346789988777 999999999999999999999999 99999999888887777777777788877778889999
Q ss_pred ccchhhHhhhhhheeeeecCcchhHHHHHHHHHHHHHHHHHHHH-HHhhcCCchhHHHHHHHHHHHHHHhhhceeeec
Q 039541 184 FFRAPIMTSVIVLLSEMVSKRWRGQVVIIGFTFFSFGLVSLPAV-AYLSRGSSWKMLYVWTSIPSIVCCIIIYPFISE 260 (521)
Q Consensus 184 ~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~i~~~i-~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~~~e 260 (521)
++.+..++...++..|..| +++++..+.......+|..++|.+ |.+.+..||+..+++.+++.++.. ......++
T Consensus 306 ~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~i~p~~~G~l~~~~g~~~~~~~~~~~~~~~~-~~~~~~~~ 381 (394)
T PRK03699 306 FFSSAIYTTIITLGSQQTK-VASPKLVNFILTCGTIGTMLTFVVTSPIVAHFGLQAALLTANGLYAVVF-VMCILLGF 381 (394)
T ss_pred HHHHHHHHHHHHHHHHHcc-CCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHhCchhhhhhhHHHHHHHH-HHHHHHHH
Confidence 9888888888888777766 456788888888889999999988 788888899999998888877776 33444443
No 170
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.15 E-value=7.6e-10 Score=111.03 Aligned_cols=158 Identities=12% Similarity=-0.022 Sum_probs=114.0
Q ss_pred HHHHHHHHHhHHhhccC---CCccHHHH---HHHHHHHhHhHHHHHHHHHhh-cCCchHHHHHHHHHHHHHHHHHhcCCc
Q 039541 338 AFGIGVVYFGLLLGVGN---LSFNIYLS---LAFNGLLDIPAYLLTFILIER-WSRKSSILTFCILSGTCSAICVAIGDE 410 (521)
Q Consensus 338 ~~~~~~~~~~~~~~~~~---~~~~~~~~---~~~~~~~~~~~~~~~g~l~dr-~g~~~~~~~~~~~~~i~~~~~~~~~~~ 410 (521)
.++.......++.++.+ .+.+.... .....+...++.+++|+++|| +|||+++.++..+.+++.+++.+..+.
T Consensus 23 ~~~~~~~~~~L~~yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~~~~~~~~~g~~~~~~~~~~ 102 (475)
T TIGR00924 23 RFSYYGMQGILAVYLVQQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMVLGGIVLMLGHFMLAMSIYP 102 (475)
T ss_pred HHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHHHHHHHHHHHHHHHHhcccH
Confidence 34444444445555543 56554333 344556778899999999999 899999999999999988877765433
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhccccCchh---hhhhhHHHHHhhhhhhhHHHHHHHhh--ccchhHHHHHHHHH
Q 039541 411 QEVLQIGLELASFFSACVAFNVLLVFGTELFTTCV---RNSTTSLVRQAVNLGAAFSPVLISAG--RQNEFLSFGVFGLV 485 (521)
Q Consensus 411 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---r~~~~~~~~~~~~~g~~~~p~~~~~~--~~~~~~~~~~~~~~ 485 (521)
+...+..++.+++.+...+...++..+.+|++. |+.+.++.+...++|.+++|.+.++. ..++...|.+.++.
T Consensus 103 --~~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~l~g~l~~~~g~~~~f~~~~~~ 180 (475)
T TIGR00924 103 --DLIFYGLGTIAVGSGLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFISPLLAGVIAENYGYHVGFNLAAVG 180 (475)
T ss_pred --hHHHHHHHHHHhccccccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHHH
Confidence 345556666777777777888889999998754 88899999999999999999999863 23577777777765
Q ss_pred HHHHhHhhhccc
Q 039541 486 VFCFGFFVVFLP 497 (521)
Q Consensus 486 ~~~~~~~~~~~~ 497 (521)
.+++.+.++..+
T Consensus 181 ~~~~~l~~~~~~ 192 (475)
T TIGR00924 181 MVIGLLTFFAGR 192 (475)
T ss_pred HHHHHHHHHHcc
Confidence 555544444433
No 171
>TIGR00895 2A0115 benzoate transport.
Probab=99.13 E-value=3.9e-10 Score=111.14 Aligned_cols=123 Identities=15% Similarity=0.195 Sum_probs=101.9
Q ss_pred CcceeeecceeeCCccccchhhHHHHHHHHHHhhhhhhhccccCCCCchHHHHHHHHHHHHHHHHHhccccHHHHHHHHH
Q 039541 101 DTTIISDWSLECAGSSILSGLPSSCFFIGCLLGGLALSTLGDSSSLGRKKLLFLSCFAMSITALATIFANNIWIYSTIRF 180 (521)
Q Consensus 101 ~~~i~~~~~~~~~~~~~~~~~~~s~~~lg~~i~~~~~g~l~dr~~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~ 180 (521)
.|.+.+++|.+.++. ++..+...++..++.++.|+++|| +|||+.+....+......++....++.+.+++..+
T Consensus 273 ~~~~~~~~g~~~~~~----~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (398)
T TIGR00895 273 LPKLMVELGFSLSLA----ATGGALFNFGGVIGSIIFGWLADR--LGPRVTALLLLLGAVFAVLVGSTLFSPTLLLLLGA 346 (398)
T ss_pred HHHHHHHcCCCHHHH----HHHHHHHHHHHHHHHHHHHHHHhh--cchHHHHHHHHHHHHHHHHHHHHhhCHHHHHHHHH
Confidence 456667788887666 999999999999999999999999 99995554444443333333333667788888899
Q ss_pred HhhccchhhHhhhhhheeeeecCcchhHHHHHHHHHHHHHHHHHHHH-HH
Q 039541 181 VAGFFRAPIMTSVIVLLSEMVSKRWRGQVVIIGFTFFSFGLVSLPAV-AY 229 (521)
Q Consensus 181 l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~i~~~i-~~ 229 (521)
+.|++.+...+...+++.|.+|+++|+++.|+......+|..++|.+ |+
T Consensus 347 ~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~G~ 396 (398)
T TIGR00895 347 IAGFFVNGGQSGLYALMALFYPTAIRATGVGWAIGIGRLGAIIGPILAGY 396 (398)
T ss_pred HHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHhHHh
Confidence 99999999999999999999999999999999999999999999988 44
No 172
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.13 E-value=5.1e-09 Score=98.92 Aligned_cols=149 Identities=13% Similarity=0.026 Sum_probs=127.1
Q ss_pred hHHhhccCCCccHH---HHHHHHHHHhHhHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHH
Q 039541 347 GLLLGVGNLSFNIY---LSLAFNGLLDIPAYLLTFILIERWSRKSSILTFCILSGTCSAICVAIGDEQEVLQIGLELASF 423 (521)
Q Consensus 347 ~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 423 (521)
.+|...++++.+.. +....++++..++.++...+.||+.||++++..+.+..++.++..+.++. +.+.+.=++.+
T Consensus 35 LLp~iA~dl~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~~Rr~lLl~~l~lFi~~n~l~alAp~f--~~Ll~aR~~~g 112 (394)
T COG2814 35 LLPPIAADLGVSEGAAGQLITAYALGVALGAPLLALLTGRLERRRLLLGLLALFIVSNLLSALAPSF--AVLLLARALAG 112 (394)
T ss_pred chHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhccH--HHHHHHHHHHH
Confidence 35667777777654 44456677888999999999999999999999999999999999998877 67888899999
Q ss_pred HHHHHHHHHHHHhhccccCchhhhhhhHHHHHhhhhhhhHHHHHHHh--hccchhHHHHHHHHHHHHHhHh-hhccc
Q 039541 424 FSACVAFNVLLVFGTELFTTCVRNSTTSLVRQAVNLGAAFSPVLISA--GRQNEFLSFGVFGLVVFCFGFF-VVFLP 497 (521)
Q Consensus 424 ~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 497 (521)
+..+..+++....+.++.|+++|+++.++......++..+|..+..+ ...++...|...+.+.++..+. +..+|
T Consensus 113 ~a~G~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~GvPLGt~ig~~~GWR~~F~~ia~l~ll~~~~~~~~lP 189 (394)
T COG2814 113 LAHGVFWSIAAALAARLVPPGKRGRALALVFTGLTLATVLGVPLGTFLGQLFGWRATFLAIAVLALLALLLLWKLLP 189 (394)
T ss_pred HHHHHHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHHHHhccHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 99999999999999999999999999999999999998888888765 3356888999888888877665 56677
No 173
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.13 E-value=1.7e-09 Score=107.93 Aligned_cols=152 Identities=11% Similarity=0.011 Sum_probs=107.8
Q ss_pred hHHhhccCCCccHHH---HHHHHHHHhHhHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHhcCC--chHHHHHHHHHH
Q 039541 347 GLLLGVGNLSFNIYL---SLAFNGLLDIPAYLLTFILIERWSRKSSILTFCILSGTCSAICVAIGD--EQEVLQIGLELA 421 (521)
Q Consensus 347 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~i~~~~~~~~~~--~~~~~~~~~~~~ 421 (521)
..|+..+ .+.+... ......++..++.++.|++.||+|||+.+..+.++.+++.+.....+. .+.+...+..++
T Consensus 49 ~~p~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l 127 (438)
T TIGR00712 49 AMPYLVE-QGFSKGELGFALSAISIAYGFSKFIMGSVSDRSNPRVFLPAGLILSAAVMLLMGFVPWATSSIAIMFVLLFL 127 (438)
T ss_pred hhHHHHH-cCCCHhHhHHHHHHHHHHHHHhhhccchhhhccCCceehHHHHHHHHHHHHHHhccccccchHHHHHHHHHH
Confidence 3454443 3555433 334455677788999999999999999999888888888776655432 111344455666
Q ss_pred HHHHHHHHHHHHHHhhccccCchhhhhhhHHHHHhhhhhhhHHHHHHHh-h--ccchhHHHHHHHHHHHHHhH-hhhccc
Q 039541 422 SFFSACVAFNVLLVFGTELFTTCVRNSTTSLVRQAVNLGAAFSPVLISA-G--RQNEFLSFGVFGLVVFCFGF-FVVFLP 497 (521)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~-~--~~~~~~~~~~~~~~~~~~~~-~~~~~~ 497 (521)
.+++.+..++.....+.|.+|++.|++++++.+....+|+.++|.+.+. . ..++...|.+.+++.++..+ ..++++
T Consensus 128 ~g~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~w~~~f~~~~~~~~i~~~~~~~~~~ 207 (438)
T TIGR00712 128 NGWFQGMGWPPCGRTMVHWWSQSERGTIVSIWNCAHNIGGGIPPLLVLLGMAWFNDWHAALYFPAICAIIVALFAFAMMR 207 (438)
T ss_pred HHHHhhcchHHHHHHHHHhcCcccchhHHHHHHHHHHhHhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhcc
Confidence 7777777777788888999999999999999999999999988877653 1 23567778777777666544 345555
Q ss_pred cC
Q 039541 498 ET 499 (521)
Q Consensus 498 ~~ 499 (521)
|+
T Consensus 208 ~~ 209 (438)
T TIGR00712 208 DT 209 (438)
T ss_pred CC
Confidence 53
No 174
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=99.13 E-value=2.3e-09 Score=102.54 Aligned_cols=173 Identities=13% Similarity=0.206 Sum_probs=130.7
Q ss_pred HHhccHHHHHHHHHHHHHHHHHHHHHHhHHhhccCCCccHH---HHHHHHHHHhHhHHHHHHHHHhhcCCchHHHHHHHH
Q 039541 320 DLFNRKWALRRLLTIMALAFGIGVVYFGLLLGVGNLSFNIY---LSLAFNGLLDIPAYLLTFILIERWSRKSSILTFCIL 396 (521)
Q Consensus 320 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~ 396 (521)
+++.++.....++......++...+++.+-.++++.+.... ......-.+.++.-++.+++.+|+|+-+++..++.+
T Consensus 366 ~~~~s~~~llff~~av~mG~g~~lv~tFLfWHled~~~~~~LfGv~~a~~~~gEI~~~ffs~klI~kiGHv~v~~lgLa~ 445 (618)
T KOG3762|consen 366 KVFASPHILLFFFVAVVMGAGVGLVFTFLFWHLEDLGGIKTLFGVVSALCHAGEILFYFFSFKLIEKIGHVNVMYLGLAC 445 (618)
T ss_pred HHhcCCCEEehhHHHHHHHHHHHHHHHHHHHHHhhcCCcceeeeehhhhhccchHHHHHHHHHHHHHhcccceeeehhhH
Confidence 56677765555556666666666777766666777664332 223344466778888999999999999999999998
Q ss_pred HHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHHHHHhhccccCchhhhhhhHHHHHhh-hhhhhHHHHHHHh--hcc
Q 039541 397 SGTCSAICVAIGDEQEVLQIGLELASFFSACVAFNVLLVFGTELFTTCVRNSTTSLVRQAV-NLGAAFSPVLISA--GRQ 473 (521)
Q Consensus 397 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~-~~g~~~~p~~~~~--~~~ 473 (521)
..+=++.+....+. |..+..-++-+...+..+....++++...|++.|+++.++..... .+|--+|.+++|. ...
T Consensus 446 ~~~Rf~~~S~L~n~--W~vLPieilqgit~aliWaa~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslIGG~~v~~f 523 (618)
T KOG3762|consen 446 NVGRFLYYSYLQNP--WMVLPIEILQGITHALIWAAIISYASHVAPPGLRATAQGLLQGIFHGLGKGLGSLIGGFVVERF 523 (618)
T ss_pred HHHHHHHHHHhcCc--hheeeHHHHHHHHHHHHHHHHHHHHHhhCCCcchHHHHHHHHHHhcccCcchhhhhhhhhheee
Confidence 88888888777666 788888899999999999999999999999999999999888765 6666677777765 234
Q ss_pred chhHHHHHHHHHHHHHhHhhh
Q 039541 474 NEFLSFGVFGLVVFCFGFFVV 494 (521)
Q Consensus 474 ~~~~~~~~~~~~~~~~~~~~~ 494 (521)
+....|-++++.+++..+...
T Consensus 524 g~~ttf~~~giAcl~~l~~~~ 544 (618)
T KOG3762|consen 524 GARTTFRIFGIACLVTLALFI 544 (618)
T ss_pred hhHHHHHHHHHHHHHHHHHHH
Confidence 566677777777766555443
No 175
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.12 E-value=7.4e-10 Score=110.95 Aligned_cols=145 Identities=19% Similarity=0.254 Sum_probs=130.2
Q ss_pred Cccee-eecceeeCCccccchhhHHHHHHHHHHhhhhhhhccccCCCCchHHHHHHHHHHHHHHHHHhccccHHHHHHHH
Q 039541 101 DTTII-SDWSLECAGSSILSGLPSSCFFIGCLLGGLALSTLGDSSSLGRKKLLFLSCFAMSITALATIFANNIWIYSTIR 179 (521)
Q Consensus 101 ~~~i~-~~~~~~~~~~~~~~~~~~s~~~lg~~i~~~~~g~l~dr~~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r 179 (521)
+|.+. +++|.+.... |++.+++.+|..+|+++.+++.+| +++++.+..+.++++++.+..+++++.+..++.-
T Consensus 241 lPl~a~~~l~~~a~~y----Gll~a~~gvGai~Gal~~~~l~~~--~~~~~lv~~~~~~~a~~~~~lal~~~~~~~~~~l 314 (524)
T PF05977_consen 241 LPLFARDVLGGGASGY----GLLLAAFGVGAILGALLLPRLRRR--LSSRRLVLLASLLFALALLLLALSPSFWLALIAL 314 (524)
T ss_pred hhHHHHHHhCCcHHHH----HHHHHHHHHHHHHHHHHHHHhhcc--cCcchhhHHHHHHHHHHHHHHhcchHHHHHHHHH
Confidence 34443 5688888555 999999999999999999999999 9999999999999999999999999999999999
Q ss_pred HHhhccchhhHhhhhhheeeeecCcchhHHHHHHHHHHHHHHHHHHHH-HHhhcCCchhHHHHHHHHHHHHHH
Q 039541 180 FVAGFFRAPIMTSVIVLLSEMVSKRWRGQVVIIGFTFFSFGLVSLPAV-AYLSRGSSWKMLYVWTSIPSIVCC 251 (521)
Q Consensus 180 ~l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~i~~~i-~~~~~~~~wr~~f~~~~~~~~~~~ 251 (521)
++.|++.........+.+.+..|++.|||+++++++....+..+|.++ |.+.+..|.+..+.+.++..++..
T Consensus 315 ~l~G~~~~~~~~~~~t~~Q~~~P~~~~GRv~si~~~~~~g~~~lGsll~G~la~~~g~~~al~~a~~~lll~~ 387 (524)
T PF05977_consen 315 FLAGAAWIIANSSLNTLVQLSVPDWVRGRVFSIYQMVFFGGMPLGSLLWGFLADHFGVRTALLIAGAALLLSA 387 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999888 888888899999888776655554
No 176
>PRK10504 putative transporter; Provisional
Probab=99.11 E-value=5.3e-09 Score=105.59 Aligned_cols=152 Identities=12% Similarity=-0.053 Sum_probs=115.4
Q ss_pred HHHHHHHhHHhhccCCCccHHHH---HHHHHHHhHhHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHhcCCchHHHHH
Q 039541 340 GIGVVYFGLLLGVGNLSFNIYLS---LAFNGLLDIPAYLLTFILIERWSRKSSILTFCILSGTCSAICVAIGDEQEVLQI 416 (521)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 416 (521)
.........|.+.++.+.+.... .....++..++.++.|++.||+|||+.+..+..+.+++.+...+..+. +..+
T Consensus 25 ~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~--~~l~ 102 (471)
T PRK10504 25 DTTIVNTALPSMAQSLGESPLHMHMVIVSYVLTVAVMLPASGWLADRVGVRNIFFTAIVLFTLGSLFCALSGTL--NELL 102 (471)
T ss_pred hHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHhCCH--HHHH
Confidence 33444556777788887765443 334446667888999999999999999998888888777766654433 5566
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccccCchhhhhhhHHHHHhhhhhhhHHHHHHHhh--ccchhHHHHHHHHHHHHHhHhh
Q 039541 417 GLELASFFSACVAFNVLLVFGTELFTTCVRNSTTSLVRQAVNLGAAFSPVLISAG--RQNEFLSFGVFGLVVFCFGFFV 493 (521)
Q Consensus 417 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 493 (521)
+..++.|++.+...+....++.|.+|++.|+++.++.+....+|..++|.+.+.. ..++.+.|.+...+.++..+..
T Consensus 103 ~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~l~~~~gw~~~f~~~~~~~~l~~~~~ 181 (471)
T PRK10504 103 LARVLQGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLLVEYASWHWIFLINIPVGIIGAIAT 181 (471)
T ss_pred HHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhccHHHHHHHHHHHHHHHHHHH
Confidence 7788888988888899999999999999999999999999999999999998862 3456667776665555544443
No 177
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.11 E-value=1.1e-09 Score=107.30 Aligned_cols=138 Identities=7% Similarity=-0.091 Sum_probs=116.2
Q ss_pred eecceeeCCccccchhhHHHHHHHHHHhhhhhhhccccCCCCchHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHhhcc
Q 039541 106 SDWSLECAGSSILSGLPSSCFFIGCLLGGLALSTLGDSSSLGRKKLLFLSCFAMSITALATIFANNIWIYSTIRFVAGFF 185 (521)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~s~~~lg~~i~~~~~g~l~dr~~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~ 185 (521)
+|.|.+..+. |.+.+...++..+..++.|++.|| +|+|+.+..+.++.+++.++.+++++.+.+++..++.|++
T Consensus 233 ~~~g~s~~~~----g~~~~~~~~~~~~~~~~~g~l~~r--~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~ 306 (382)
T PRK11128 233 QAAGYSASTI----GYLWSLGVVAEVLIFAFSNRLFRR--WSARDLLLLSAICGVVRWGLMGSTTALPWLIVIQILHCGT 306 (382)
T ss_pred HHCCCCHhHH----HHHHHHHHHHHHHHHHHHHHHHHH--CCHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHH
Confidence 5678887555 999999999999999999999999 9999999999999999888888999999999999999999
Q ss_pred chhhHhhhhhheeeeecCcchhHHHHHHH-HHHHHHHHHHHHH-HHhhcCCchhHHHHHHHHHHHHHH
Q 039541 186 RAPIMTSVIVLLSEMVSKRWRGQVVIIGF-TFFSFGLVSLPAV-AYLSRGSSWKMLYVWTSIPSIVCC 251 (521)
Q Consensus 186 ~g~~~~~~~~~i~~~~~~~~rg~~~~~~~-~~~~~G~~i~~~i-~~~~~~~~wr~~f~~~~~~~~~~~ 251 (521)
.+...+....++.+. ++++++++.++.. ....+|..+||.+ |.+.+..|+ ..|+..+++.++.+
T Consensus 307 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~ig~~i~G~l~~~~g~-~~~~~~~~~~~~~~ 372 (382)
T PRK11128 307 FTVCHLAAMRYIAAR-PGSEVIRLQALYSALAMGGSIAIMTVLSGFLYQHLGA-GVFWVMALVALPAL 372 (382)
T ss_pred HHHHHHHHHHHHHHC-CHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH-HHHHHHHHHHHHHH
Confidence 999889988888886 5667788888876 5567788899998 777787787 46666666655544
No 178
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.11 E-value=1.1e-09 Score=109.79 Aligned_cols=145 Identities=15% Similarity=0.109 Sum_probs=100.8
Q ss_pred eeeecceeeCCccccchhhHHHHHHHHHHhhhhhhhccccCCC--CchHHH-HHHHHHHHHHHHHHhc--cccHHHHHHH
Q 039541 104 IISDWSLECAGSSILSGLPSSCFFIGCLLGGLALSTLGDSSSL--GRKKLL-FLSCFAMSITALATIF--ANNIWIYSTI 178 (521)
Q Consensus 104 i~~~~~~~~~~~~~~~~~~~s~~~lg~~i~~~~~g~l~dr~~~--Grr~~l-~~~~~~~~~~~~~~~~--~~~~~~l~~~ 178 (521)
++++.|.+.++. +++.+.+.++..++.++.|+++|| + |||+.. +....+..++.++..+ ..+.+.+++.
T Consensus 280 l~~~~g~s~~~~----~~~~~~~~~~~~~g~~~~G~l~dr--~~~~r~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 353 (452)
T PRK11273 280 LKEVKHFALDKS----SWAYFLYEYAGIPGTLLCGWMSDK--VFRGNRGATGVFFMTLVTIATIVYWLNPAGNPTVDMAC 353 (452)
T ss_pred HHHhcCCCHHHH----HHHHHHHHHHHHHHHHHHHHHHHH--HccCCcchHHHHHHHHHHHHHHHHHHhcccChHHHHHH
Confidence 445578887666 888889999999999999999999 9 555433 2223333333332222 3455555555
Q ss_pred HHHhhccchhhHhhhhhheeeeecCcchhHHHHHHHHHHHHHHH-HHHHH-HHhhcCCchhHHHHHHHHHHHHHHhhh
Q 039541 179 RFVAGFFRAPIMTSVIVLLSEMVSKRWRGQVVIIGFTFFSFGLV-SLPAV-AYLSRGSSWKMLYVWTSIPSIVCCIII 254 (521)
Q Consensus 179 r~l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~-i~~~i-~~~~~~~~wr~~f~~~~~~~~~~~~~~ 254 (521)
.++.|.+..........++.|.+|+++||+++|+.+....+|.. ++|.+ +.+.+..||+..|++.++.+++.++..
T Consensus 354 ~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~g~~v~g~l~~~~g~~~~f~~~~~~~~~~~~~~ 431 (452)
T PRK11273 354 MIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILL 431 (452)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHcChhhhhhHHHHHHHHHHHHHHHhhhhhHHHHHHHhcchHHHHHHHHHHHHHHHHH
Confidence 66666544333333445677999999999999999888778755 47776 888888899999998888777766333
No 179
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.10 E-value=3.3e-09 Score=107.63 Aligned_cols=159 Identities=14% Similarity=0.054 Sum_probs=122.0
Q ss_pred HHHHHHHhHHhhccCCCccH---HHHHHHHHHHhHhHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHhcCCchHHHHH
Q 039541 340 GIGVVYFGLLLGVGNLSFNI---YLSLAFNGLLDIPAYLLTFILIERWSRKSSILTFCILSGTCSAICVAIGDEQEVLQI 416 (521)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 416 (521)
.........|.+.++.+.+. ........++..++.++.|++.||+|||+.+..+..+..++.++....++. +...
T Consensus 17 ~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~--~~l~ 94 (485)
T TIGR00711 17 DSTIVNVAIPTIAGDLGSSLSQVQWVITSYMLANAISIPLTGWLAKRFGTRRLFLISTFAFTLGSLLCGVAPNL--ELMI 94 (485)
T ss_pred HHHHHHHHHHHHHHhcCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHhCcHHHHHHHHHHHHHHHHHHhCcCCH--HHHH
Confidence 33445556777777777654 334455667888899999999999999999999999999888887766544 5667
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccccCchhhhhhhHHHHHhhhhhhhHHHHHHHhh--ccchhHHHHHHHHHHHHHhHh-h
Q 039541 417 GLELASFFSACVAFNVLLVFGTELFTTCVRNSTTSLVRQAVNLGAAFSPVLISAG--RQNEFLSFGVFGLVVFCFGFF-V 493 (521)
Q Consensus 417 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~-~ 493 (521)
+..++.|++.+...+....++.|.+|++.|+++.++......+|..++|.+.++. ..++.+.|.+.+.+.++..+. .
T Consensus 95 ~~~~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~w~~~f~~~~~~~~~~~~~~~ 174 (485)
T TIGR00711 95 IFRVIQGFGGGPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWIIENYHWRWIFLINVPIGIIVVVVAF 174 (485)
T ss_pred HHHHHHHhhhhhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhccHhHhccCcCceehhhhhhHHHHHHHHHHH
Confidence 7788888888888899999999999999999999999999999999999998863 345566666666555544443 3
Q ss_pred hccccCC
Q 039541 494 VFLPETI 500 (521)
Q Consensus 494 ~~~~~~~ 500 (521)
+.+|+++
T Consensus 175 ~~~~~~~ 181 (485)
T TIGR00711 175 FILPRDK 181 (485)
T ss_pred HHcCCcc
Confidence 4455433
No 180
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.10 E-value=9.7e-10 Score=108.24 Aligned_cols=133 Identities=11% Similarity=0.136 Sum_probs=115.1
Q ss_pred chhhHHHHHHHHHHhhhhhhhccccCCCCchHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHhhccchhhHhhhhhhee
Q 039541 119 SGLPSSCFFIGCLLGGLALSTLGDSSSLGRKKLLFLSCFAMSITALATIFANNIWIYSTIRFVAGFFRAPIMTSVIVLLS 198 (521)
Q Consensus 119 ~~~~~s~~~lg~~i~~~~~g~l~dr~~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~ 198 (521)
.|.+.+...+...++.++.|++.|| +|||+.+.++.++.+++..+...++|.+.+++.++++|++.+........++.
T Consensus 256 ~g~~~~~~~i~~~~~~~~~g~l~~r--~g~~~~l~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~ 333 (396)
T TIGR00882 256 FGYVTTMGELLNALIMFCAPLIINR--IGAKNALLIAGTIMSVRIIGSSFATTALEVVILKMLHAFEVPFLLVGCFKYIT 333 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH--hccchhHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3888888889999999999999999 99999999999999998888888899999999999999998777667777788
Q ss_pred eeecCcchhHHHHH-HHHHHHHHHHHHHHH-HHhhcCCchhHHHHHHHHHHHHHHhh
Q 039541 199 EMVSKRWRGQVVII-GFTFFSFGLVSLPAV-AYLSRGSSWKMLYVWTSIPSIVCCII 253 (521)
Q Consensus 199 ~~~~~~~rg~~~~~-~~~~~~~G~~i~~~i-~~~~~~~~wr~~f~~~~~~~~~~~~~ 253 (521)
+..+++.++...+. .+....+|.++++.+ |++.+..||+.+|.+.+++.++..+.
T Consensus 334 ~~~~~~~~at~~~~~~~~~~~lg~~~~~~l~G~l~~~~G~~~~f~~~~~~~~i~~~~ 390 (396)
T TIGR00882 334 SQFDVRLSATIYLIGFQFAKQLAMIFLSTLAGNMYDSIGFQGAYLVLGCIVLLFTLI 390 (396)
T ss_pred HhCCcceEEEeehHHHHHHHHHHHHHHHHhHHHHHHhcccHHHHHHHHHHHHHHHHH
Confidence 88888888877666 677889999999988 78888889999999988887776633
No 181
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.10 E-value=3.1e-09 Score=87.58 Aligned_cols=127 Identities=15% Similarity=0.124 Sum_probs=101.0
Q ss_pred HHHHhHhHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHHHHHhhccccCchh
Q 039541 366 NGLLDIPAYLLTFILIERWSRKSSILTFCILSGTCSAICVAIGDEQEVLQIGLELASFFSACVAFNVLLVFGTELFTTCV 445 (521)
Q Consensus 366 ~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 445 (521)
..++.+++.++.+++.||+|||+.+..+..+..++.+......+. +...+..++.+++.+...+....+..|.+|++.
T Consensus 7 ~~~~~~~~~~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 84 (141)
T TIGR00880 7 YALGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFALSSNI--TVLIIARFLQGFGAAFALVAGAALIADIYPPEE 84 (141)
T ss_pred ehhHHHHHHhhHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhccH--HHHHHHHHHHHHHHHHHHHhHHHHHHHHCChhh
Confidence 346777889999999999999999998888888877766654433 556667788888888888999999999999999
Q ss_pred hhhhhHHHHHhhhhhhhHHHHHHHhh--ccchhHHHHHHHHHHHHHhHhhh
Q 039541 446 RNSTTSLVRQAVNLGAAFSPVLISAG--RQNEFLSFGVFGLVVFCFGFFVV 494 (521)
Q Consensus 446 r~~~~~~~~~~~~~g~~~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 494 (521)
|+++.++.+....+|..++|.+.+.. ..++...+.+.+.+.+++.+...
T Consensus 85 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 135 (141)
T TIGR00880 85 RGVALGLMSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLAILALAAFILLA 135 (141)
T ss_pred hhHHHHHHHHhHHHHHHHhHHhHHHHhcccchHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999998863 23455666666666665555443
No 182
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.09 E-value=3.6e-09 Score=104.67 Aligned_cols=148 Identities=13% Similarity=0.056 Sum_probs=102.0
Q ss_pred HhHHhhc-cCCCccHHHHH---HHHHHHhHhHHHHHHHHHhhc-CCchHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHH
Q 039541 346 FGLLLGV-GNLSFNIYLSL---AFNGLLDIPAYLLTFILIERW-SRKSSILTFCILSGTCSAICVAIGDEQEVLQIGLEL 420 (521)
Q Consensus 346 ~~~~~~~-~~~~~~~~~~~---~~~~~~~~~~~~~~g~l~dr~-g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 420 (521)
..++.++ ++.+.+..... ....+...++.+++|+++||+ |||+.+.++.++..++.+++....... ....+...
T Consensus 30 ~~L~~yL~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~iliG~il~~lg~lll~~~~~~~-~~~~l~l~ 108 (493)
T PRK15462 30 ALLILYLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALLMAIGHVVLGASEIHP-SFLYLSLA 108 (493)
T ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHhhcch-hHHHHHHH
Confidence 3344444 33565544333 334455667888999999999 999999999999888876665422111 22333333
Q ss_pred HHHHHHHHHHHHHHHhhccccCch--hhhhhhHHHHHhhhhhhhHHHHHHHhh--ccchhHHHHHHHHHHHHHhHhhh
Q 039541 421 ASFFSACVAFNVLLVFGTELFTTC--VRNSTTSLVRQAVNLGAAFSPVLISAG--RQNEFLSFGVFGLVVFCFGFFVV 494 (521)
Q Consensus 421 ~~~~~~~~~~~~~~~~~~~~~~~~--~r~~~~~~~~~~~~~g~~~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 494 (521)
+..++.+...+...++..|.+|++ .|.++.++.+...++|++++|.+.++. ..++...|.+.++..+++.+.++
T Consensus 109 li~iG~G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~L~~~~Gw~~~F~iaaigm~l~li~~~ 186 (493)
T PRK15462 109 IIVCGYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGYAQEEYSWAMGFGLAAVGMIAGLVIFL 186 (493)
T ss_pred HHHHhcccccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHHHHHhhhChHHHHHHHHHHHHHHHHHHH
Confidence 444555555566778899999976 689999999999999999999999874 34677777776665555554443
No 183
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.08 E-value=7.2e-09 Score=102.39 Aligned_cols=151 Identities=15% Similarity=0.072 Sum_probs=112.4
Q ss_pred HhhccCCCccHHH---HHHHHHHHhHhHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHH
Q 039541 349 LLGVGNLSFNIYL---SLAFNGLLDIPAYLLTFILIERWSRKSSILTFCILSGTCSAICVAIGDEQEVLQIGLELASFFS 425 (521)
Q Consensus 349 ~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 425 (521)
|...++++.+... ...+..++..++.++.|+++||+|||+++..+..+.+++.+...+..+. +.+++.-++.|++
T Consensus 40 ~~i~~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~--~~l~~~r~l~Gi~ 117 (413)
T PRK15403 40 INVVRDFNADVSLAPASVSLYLAGGMALQWLLGPLSDRIGRRPVLITGALIFTLACAATLFTTSM--TQFLIARFIQGTS 117 (413)
T ss_pred HHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHcCchHHHHHHHHHHHHHHHHHHHcCCH--HHHHHHHHHHHHH
Confidence 3344445544332 3344456777889999999999999999999998888888777766544 4566677777777
Q ss_pred HHHHHHHHHHhhccccCchhhhhhhHHHHHhhhhhhhHHHHHHHhh--ccchhHHHHHHHHHHHHHhHh-hhccccCCC
Q 039541 426 ACVAFNVLLVFGTELFTTCVRNSTTSLVRQAVNLGAAFSPVLISAG--RQNEFLSFGVFGLVVFCFGFF-VVFLPETIG 501 (521)
Q Consensus 426 ~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 501 (521)
.+...+.......|.+|++.+++++++.+....+|..++|.+.+.. ..++...|.+.+++.+++.+. .+.+||+++
T Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~lp~~~~ 196 (413)
T PRK15403 118 ICFIATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALMHFVHWKVLFAIIAVMGLIAFVGLLLAMPETVK 196 (413)
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCCcc
Confidence 7665667778889999999999999999999999999999988752 346777888877776666554 345677543
No 184
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.08 E-value=7.4e-10 Score=108.34 Aligned_cols=154 Identities=11% Similarity=0.011 Sum_probs=114.5
Q ss_pred HHHhHHhhccCCCccHHH---HHHHHHHHhHhHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHH
Q 039541 344 VYFGLLLGVGNLSFNIYL---SLAFNGLLDIPAYLLTFILIERWSRKSSILTFCILSGTCSAICVAIGDEQEVLQIGLEL 420 (521)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 420 (521)
..+..|.+.++++.+... ......++..++.++.|+++||+|||+.+..+..+.+++.++..+..+. +...+..+
T Consensus 14 ~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 91 (379)
T TIGR00881 14 FALAMPYLVEEIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCAIVNLFFGFSTSL--WVMAALWA 91 (379)
T ss_pred hhhhhHHHHHHhCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhhCCeehhHHHHHHHHHHHHHHHHhhhH--HHHHHHHH
Confidence 334456666666665443 3345557777889999999999999999999999998888888776543 56677777
Q ss_pred HHHHHHHHHHHHHHHhhccccCchhhhhhhHHHHHhhhhhhhHHHH-HHHh--hccchhHHHHHHHHHHHHHhHh-hhcc
Q 039541 421 ASFFSACVAFNVLLVFGTELFTTCVRNSTTSLVRQAVNLGAAFSPV-LISA--GRQNEFLSFGVFGLVVFCFGFF-VVFL 496 (521)
Q Consensus 421 ~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~-~~~~--~~~~~~~~~~~~~~~~~~~~~~-~~~~ 496 (521)
+.+++.+...+...+++.|.+|+++|+.+.++.+....+|..++|. +.+. ...++...+.+.+++.++..+. .+..
T Consensus 92 ~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (379)
T TIGR00881 92 LNGIFQGMGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLFGIAELYSWHWVFIVPGIIAIIVSLICFLLL 171 (379)
T ss_pred HHHhhccccCCchHHHHHHhcCHhhheeeEeehhccchhHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHheee
Confidence 8888888888899999999999999999999999999999999994 4432 2334566676666655554443 3444
Q ss_pred ccC
Q 039541 497 PET 499 (521)
Q Consensus 497 ~~~ 499 (521)
+++
T Consensus 172 ~~~ 174 (379)
T TIGR00881 172 RDS 174 (379)
T ss_pred CCC
Confidence 443
No 185
>TIGR00898 2A0119 cation transport protein.
Probab=99.08 E-value=1.7e-09 Score=110.33 Aligned_cols=139 Identities=17% Similarity=0.112 Sum_probs=113.6
Q ss_pred hhhHHHHHHHHHHhhhhhhhccccCCCCchHHHHHHHHHHHHHHHHHhccccH--HHHHHHHHHhhccchhhHhhhhhhe
Q 039541 120 GLPSSCFFIGCLLGGLALSTLGDSSSLGRKKLLFLSCFAMSITALATIFANNI--WIYSTIRFVAGFFRAPIMTSVIVLL 197 (521)
Q Consensus 120 ~~~~s~~~lg~~i~~~~~g~l~dr~~~Grr~~l~~~~~~~~~~~~~~~~~~~~--~~l~~~r~l~G~~~g~~~~~~~~~i 197 (521)
.+......+....+.++.+++.|| +|||+.+.++.++.+++.++..+.++. +..++.-++.+++.+...+....+.
T Consensus 358 ~~~~~~~~~~~i~~~~~~~~l~dr--~grr~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 435 (505)
T TIGR00898 358 YLDLFISGLVELPAKLITLLLIDR--LGRRYTMAASLLLAGVALLLLLFVPVDLYFLRTALAVLGKFGITSAFQMVYLYT 435 (505)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH--hCCHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 344445567777889999999999 999999999999999998888877654 5555666777788888888999999
Q ss_pred eeeecCcchhHHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHhhhceeeecch
Q 039541 198 SEMVSKRWRGQVVIIGFTFFSFGLVSLPAVAYLSRGSSWKMLYVWTSIPSIVCCIIIYPFISESP 262 (521)
Q Consensus 198 ~~~~~~~~rg~~~~~~~~~~~~G~~i~~~i~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~~~esp 262 (521)
.|.+|++.|++++|+.+....+|.+++|.+.. ....++..++++.++..++.. +..+++||+.
T Consensus 436 ~e~~p~~~r~~~~g~~~~~~~ig~~i~p~i~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~lpet~ 498 (505)
T TIGR00898 436 AELYPTVVRNLGVGVCSTMARVGSIISPFLVY-LGEKWLFLPLVLFGGLALLAG-ILTLFLPETK 498 (505)
T ss_pred cccccHHHHhhhHhHHHHHHHHHHHHHhHHHH-HHHHHHhhHHHHHHHHHHHHH-HHHHcCcCCC
Confidence 99999999999999999999999999999855 445577788888888777776 5556778863
No 186
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.08 E-value=1.5e-09 Score=107.52 Aligned_cols=151 Identities=14% Similarity=0.185 Sum_probs=129.4
Q ss_pred ceeeecceeeCCccccchhhHHHHHHHHHHhhhhhhhccccCCCCch--HHHHHHHHHHHHHHHHHhc--------cccH
Q 039541 103 TIISDWSLECAGSSILSGLPSSCFFIGCLLGGLALSTLGDSSSLGRK--KLLFLSCFAMSITALATIF--------ANNI 172 (521)
Q Consensus 103 ~i~~~~~~~~~~~~~~~~~~~s~~~lg~~i~~~~~g~l~dr~~~Grr--~~l~~~~~~~~~~~~~~~~--------~~~~ 172 (521)
...+++|++..+. ..+.-+..+..++|++++|++.|| +|.| ++++++++++.+..+...+ .++.
T Consensus 307 ~a~~~lg~s~~~l----~~~~l~~~i~a~~Ga~~~g~l~~r--~g~k~~~~l~~~l~~~~~i~~~g~~G~~~~~~g~~~~ 380 (477)
T PF11700_consen 307 YATEVLGMSTTQL----IVFGLVVQIVAIIGALLFGWLQDR--FGPKTKRTLLISLILWIIIPLYGLFGFWPSFFGLKSP 380 (477)
T ss_pred HHHHhcCcCHHHH----HHHHHHHHHHHHHHHHHHHHHHHH--hCCchhHHHHHHHHHHHHHHHHHHHHhhhcccCcccH
Confidence 4456899999776 777788888999999999999999 9999 8999988888776666665 6788
Q ss_pred HHHHHHHHHhhccchhhHhhhhhheeeeecCcchhHHHHHHHHHHHHHHHHHHHH-HHhhcCCc-hhHHHHHHHHHHHHH
Q 039541 173 WIYSTIRFVAGFFRAPIMTSVIVLLSEMVSKRWRGQVVIIGFTFFSFGLVSLPAV-AYLSRGSS-WKMLYVWTSIPSIVC 250 (521)
Q Consensus 173 ~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~i~~~i-~~~~~~~~-wr~~f~~~~~~~~~~ 250 (521)
+.+.+.-++.|+..|...+...++.+|+.|+++.+..+|++....-....+||++ |.+.+..| -|+.+....++.++.
T Consensus 381 ~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGPll~g~i~~~tg~~r~g~~~l~~lf~~g 460 (477)
T PF11700_consen 381 WEFWVLAVLIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKASSWLGPLLFGLITDATGSQRYGFLFLLVLFLIG 460 (477)
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHH
Confidence 8999999999999999999999999999999999999999999999999999998 77766544 888888888777777
Q ss_pred Hhhhceeeec
Q 039541 251 CIIIYPFISE 260 (521)
Q Consensus 251 ~~~~~~~~~e 260 (521)
+ ++..+++.
T Consensus 461 l-~ll~~v~~ 469 (477)
T PF11700_consen 461 L-ILLFFVDV 469 (477)
T ss_pred H-HHHhhccc
Confidence 7 44455554
No 187
>PRK11043 putative transporter; Provisional
Probab=99.07 E-value=1.5e-08 Score=100.11 Aligned_cols=149 Identities=14% Similarity=0.010 Sum_probs=109.1
Q ss_pred HhhccCCCccHHHHH---HHHHHHhHhHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHH
Q 039541 349 LLGVGNLSFNIYLSL---AFNGLLDIPAYLLTFILIERWSRKSSILTFCILSGTCSAICVAIGDEQEVLQIGLELASFFS 425 (521)
Q Consensus 349 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 425 (521)
+.+.++.+.+..... .+..++..++.++.|+++||+|||+.+..+..+..++.+...+.++. +...+..++.|++
T Consensus 30 ~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~--~~l~~~~~l~G~~ 107 (401)
T PRK11043 30 KAIQADLQTSASAVSASLSLFLAGFALGQLLWGPLSDRYGRKPVLLAGLSLFALGSLGMLWVESA--AQLLVLRFVQAVG 107 (401)
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhcCCcHHHHHHHHHHHHHHHHHHHhcCH--HHHHHHHHHHHhh
Confidence 334455565544433 44456677899999999999999999999988888887777665443 4555666777777
Q ss_pred HHHHHHHHHHhhccccCchhhhhhhHHHHHhhhhhhhHHHHHHHhh--ccchhHHHHHHHHHHHHHhHhhhccccC
Q 039541 426 ACVAFNVLLVFGTELFTTCVRNSTTSLVRQAVNLGAAFSPVLISAG--RQNEFLSFGVFGLVVFCFGFFVVFLPET 499 (521)
Q Consensus 426 ~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 499 (521)
.+...+....+..|.+|++.++...+..+....++..++|.+.++. ..++...+.+.+++.++..+..+.+++.
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (401)
T PRK11043 108 VCSAAVIWQALVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWLLNHFGWQAIFATLFAITLLLILPTLRLKPS 183 (401)
T ss_pred hHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 7777777778899999999989998888888888999999988763 3456677777776666655555445443
No 188
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.07 E-value=2e-08 Score=101.27 Aligned_cols=180 Identities=12% Similarity=0.013 Sum_probs=125.3
Q ss_pred HhccHHHHHHHHHHHHHHHHHHHHHHhHHhhccCCCccHHHHHHHHHHHh-HhHHHHHHHHHhhc-----CCchH-HHHH
Q 039541 321 LFNRKWALRRLLTIMALAFGIGVVYFGLLLGVGNLSFNIYLSLAFNGLLD-IPAYLLTFILIERW-----SRKSS-ILTF 393 (521)
Q Consensus 321 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~l~dr~-----g~~~~-~~~~ 393 (521)
..++++....+.+.+............+|.++++.+.+....+....++. .++.++.+.++||+ |||+. +..+
T Consensus 8 ~~~~~~~~~~~~l~~~~gl~~~~~~~~l~~~l~~~g~~~~~ig~~~~~~~~~~~~~l~gpl~Dr~~~~~~Grrr~~ll~~ 87 (491)
T PRK11010 8 IFQQPNSAILLILGFASGLPLALTSGTLQAWMTVENIDLKTIGFFSLVGQAYVFKFLWSPLMDRYTPPFLGRRRGWLLAT 87 (491)
T ss_pred HHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHcccccCCCCchHHHHHH
Confidence 33444444444444444444555556678888887877655555432222 26889999999999 98885 5566
Q ss_pred HHHHHHHHHHHHhcCCch-HHHHHHHHHHHHHHHHHHHHHHHHhhccccCchhhhhhhHHHHHhhhhhhhHHHHHHHhh-
Q 039541 394 CILSGTCSAICVAIGDEQ-EVLQIGLELASFFSACVAFNVLLVFGTELFTTCVRNSTTSLVRQAVNLGAAFSPVLISAG- 471 (521)
Q Consensus 394 ~~~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~~- 471 (521)
.+..+++...+.+..... .+...+..++.+++.+...+...++..|.+|+++|+.+.++......+|..+++.+.++.
T Consensus 88 ~i~~~~~~~~~a~~~~~~~l~~l~~~~~l~~~~~a~~~i~~~a~~~~~~~~~~rg~~~~i~~~g~~lG~llg~~l~~~l~ 167 (491)
T PRK11010 88 QLLLLVAIAAMGFLEPGTQLRWLAALAVVIAFCSASQDIVFDAWKTDVLPAEERGAGAAISVLGYRLAMLVSGGLALWLA 167 (491)
T ss_pred HHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 666666666665554322 245566667777777778888999999999999999999999999999999998877652
Q ss_pred c--cchhHHHHHHHHHHHHHhHhhhccccCC
Q 039541 472 R--QNEFLSFGVFGLVVFCFGFFVVFLPETI 500 (521)
Q Consensus 472 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 500 (521)
. .++...|.+.+++.++..+..+.+||+.
T Consensus 168 ~~~~GWr~~f~i~a~l~ll~~l~~~~~~e~~ 198 (491)
T PRK11010 168 DRYLGWQGMYWLMAALLIPCIIATLLAPEPT 198 (491)
T ss_pred hcccCHHHHHHHHHHHHHHHHHHHHhcCCCc
Confidence 2 3678888888877766655555566653
No 189
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.06 E-value=1.4e-08 Score=102.84 Aligned_cols=156 Identities=15% Similarity=-0.021 Sum_probs=117.2
Q ss_pred HHHHHhHHhhccCCCccHH---HHHHHHHHHhHhHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHhcCCchHHHHHHH
Q 039541 342 GVVYFGLLLGVGNLSFNIY---LSLAFNGLLDIPAYLLTFILIERWSRKSSILTFCILSGTCSAICVAIGDEQEVLQIGL 418 (521)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 418 (521)
+......|.+.++++.+.. +......++...+.+..|+++||+|||+.+..+..+..++.++..+.++. +..++.
T Consensus 23 tiv~~a~p~i~~~l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~Grk~~l~~~~~~~~~~~~~~~~a~~~--~~li~~ 100 (495)
T PRK14995 23 TVLHVAAPTLSMTLGASGNELLWIIDIYSLVMAGMVLPMGALGDRIGFKRLLMLGGTLFGLASLAAAFSPTA--SWLIAT 100 (495)
T ss_pred HHHHHHHHHHHHHhCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHcCCH--HHHHHH
Confidence 4555667777777775443 33344556666778899999999999999999999999998888876554 566667
Q ss_pred HHHHHHHHHHHHHHHHHhhcccc-CchhhhhhhHHHHHhhhhhhhHHHHHHHhh--ccchhHHHHHHHHHHHHHhHh-hh
Q 039541 419 ELASFFSACVAFNVLLVFGTELF-TTCVRNSTTSLVRQAVNLGAAFSPVLISAG--RQNEFLSFGVFGLVVFCFGFF-VV 494 (521)
Q Consensus 419 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~r~~~~~~~~~~~~~g~~~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~-~~ 494 (521)
-++.|++.+...+.......+.+ |++.|+++.|+......+|..++|.+.++. ..++.+.|.+...+.++..++ .+
T Consensus 101 r~l~G~g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~l~~~~gwr~~f~i~~~~~~~~~~l~~~ 180 (495)
T PRK14995 101 RALLAIGAAMIVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPLVGGILLEHFYWGSVFLINVPIVLVVMGLTAR 180 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHH
Confidence 78888888888777777666655 789999999999999999999999999873 345677777766555554443 34
Q ss_pred ccccC
Q 039541 495 FLPET 499 (521)
Q Consensus 495 ~~~~~ 499 (521)
.+|+.
T Consensus 181 ~l~~~ 185 (495)
T PRK14995 181 YVPRQ 185 (495)
T ss_pred hCCCC
Confidence 55654
No 190
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.05 E-value=1.2e-08 Score=100.93 Aligned_cols=152 Identities=16% Similarity=-0.005 Sum_probs=111.3
Q ss_pred HHhhccCCCccHHHH---HHHHHHHhHhHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHH
Q 039541 348 LLLGVGNLSFNIYLS---LAFNGLLDIPAYLLTFILIERWSRKSSILTFCILSGTCSAICVAIGDEQEVLQIGLELASFF 424 (521)
Q Consensus 348 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 424 (521)
.+.+.++++.+.... .....++..++.++.|+++||+|||+.+..+..+.+++.+.....++. +..++..++.|+
T Consensus 36 ~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~--~~l~~~~~l~G~ 113 (406)
T PRK15402 36 MLAVVEDFNAGAEWVPTSMTAYLAGGMFLQWLLGPLSDRIGRRPVMLAGVAFFILTCLAILLAQSI--EQFTLLRFLQGI 113 (406)
T ss_pred hHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHccH--HHHHHHHHHHHh
Confidence 344556666654433 344556777888999999999999999999988888887777665433 455666677777
Q ss_pred HHHHHHHHHHHhhccccCchhhhhhhHHHHHhhhhhhhHHHHHHHh--hccchhHHHHHHHHHHHHHhHh-hhccccCCC
Q 039541 425 SACVAFNVLLVFGTELFTTCVRNSTTSLVRQAVNLGAAFSPVLISA--GRQNEFLSFGVFGLVVFCFGFF-VVFLPETIG 501 (521)
Q Consensus 425 ~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 501 (521)
+.+...+.......|.+|++.|.++.++......++..++|.+.+. ...++...+.+.+++.++..+. .+..||+++
T Consensus 114 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (406)
T PRK15402 114 GLCFIGAVGYAAIQESFEEADAIKITALMANVALLAPLLGPLVGAALIHVLPWRGMFVLFAALAALSFFGLWRAMPETAG 193 (406)
T ss_pred HhhhHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHHHHhCCCCCc
Confidence 7777778888889999999999999998888888888899988775 2345667777777766655543 344566543
No 191
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.04 E-value=1.4e-08 Score=100.05 Aligned_cols=129 Identities=8% Similarity=-0.092 Sum_probs=101.1
Q ss_pred HHHHHhHHhhccCCCccHHHHH---HHHHHHhHhHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHhcCC-chHHHHHH
Q 039541 342 GVVYFGLLLGVGNLSFNIYLSL---AFNGLLDIPAYLLTFILIERWSRKSSILTFCILSGTCSAICVAIGD-EQEVLQIG 417 (521)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~~~ 417 (521)
+...-..|.+.++.+.+....+ ....++.+++++..|++.||+|||+.+..+..+.+++.+++..... .+.+...+
T Consensus 20 ~~~~~l~~~~~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~r~~~~~g~~l~~~g~~l~~~~~~~~~~~~~l~ 99 (410)
T TIGR00885 20 DITNPMVPQFQQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKLSYKAGILLGLFLYALGAFLFWPAAEIMNYTLFLV 99 (410)
T ss_pred HhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHhhccHHHHHH
Confidence 3333445666677776654433 4455777889999999999999999999999999988877644322 22256667
Q ss_pred HHHHHHHHHHHHHHHHHHhhccccCchhhhhhhHHHHHhhhhhhhHHHHHHHh
Q 039541 418 LELASFFSACVAFNVLLVFGTELFTTCVRNSTTSLVRQAVNLGAAFSPVLISA 470 (521)
Q Consensus 418 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~ 470 (521)
..++.|++.+...+....+..+..|++.|++..++.+....+|..++|.+.+.
T Consensus 100 ~~~l~G~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~ 152 (410)
T TIGR00885 100 GLFILTAGLGFLETAANPYILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQQ 152 (410)
T ss_pred HHHHHHhhHHHHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77888999999999888999999999999999999999999999999988763
No 192
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.04 E-value=7.7e-09 Score=101.22 Aligned_cols=151 Identities=16% Similarity=0.110 Sum_probs=114.6
Q ss_pred HHhhccCCCccHHHH---HHHHHHHhHhHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHH
Q 039541 348 LLLGVGNLSFNIYLS---LAFNGLLDIPAYLLTFILIERWSRKSSILTFCILSGTCSAICVAIGDEQEVLQIGLELASFF 424 (521)
Q Consensus 348 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 424 (521)
.|.+.++.+.+.... .....++..++.++.|++.||+|||+.+..+.++.+++.+.+....+. +...+..++.++
T Consensus 14 ~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~~~~~--~~~~~~~~l~g~ 91 (377)
T PRK11102 14 LPVIAADFGVSAGSVQMTLSAYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACALAQTI--DQLIYMRFLHGL 91 (377)
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhcCChHHHHHHHHHHHHHHHHHHHHccH--HHHHHHHHHHHH
Confidence 355555666554333 344556777899999999999999999999999988888887766544 456667778888
Q ss_pred HHHHHHHHHHHhhccccCchhhhhhhHHHHHhhhhhhhHHHHHHHhh--ccchhHHHHHHHHHHHHHhHh-hhccccCC
Q 039541 425 SACVAFNVLLVFGTELFTTCVRNSTTSLVRQAVNLGAAFSPVLISAG--RQNEFLSFGVFGLVVFCFGFF-VVFLPETI 500 (521)
Q Consensus 425 ~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 500 (521)
+.+...+....+..|.+|++.|+++.++.+....+|..++|.+.+.. ..++...+.+.+++.++..+. .+.++|++
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (377)
T PRK11102 92 AAAAASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLVWFSWHAIFWVLALAAILAAALVFFFIPETL 170 (377)
T ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHhCCccC
Confidence 88888888899999999999999999999999999999999988753 235666777666666555443 34556543
No 193
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=99.03 E-value=9.4e-10 Score=98.11 Aligned_cols=153 Identities=19% Similarity=0.236 Sum_probs=119.4
Q ss_pred CcceeeecceeeCCccccchhhHHHHHHHHHHhhhhhhhccccCCCCchHHHHHHHHHHHHHHHHHhcc-------ccHH
Q 039541 101 DTTIISDWSLECAGSSILSGLPSSCFFIGCLLGGLALSTLGDSSSLGRKKLLFLSCFAMSITALATIFA-------NNIW 173 (521)
Q Consensus 101 ~~~i~~~~~~~~~~~~~~~~~~~s~~~lg~~i~~~~~g~l~dr~~~Grr~~l~~~~~~~~~~~~~~~~~-------~~~~ 173 (521)
-|++++.+|++.+|. ..+.++..+|..+| ++.|.+.|+ +|.+.++.+|.+...+|..+...+ .++|
T Consensus 25 S~~Lk~~l~~sq~~l----~~l~~~~~~G~~~G-~~~G~l~d~--~gp~~~l~iG~~~~~~GY~~~~l~~~~~i~~~~~~ 97 (250)
T PF06813_consen 25 SPQLKSRLGYSQSQL----NTLSTAGDIGSYFG-ILAGLLYDR--FGPWVVLLIGAVLGFVGYGLLWLAVSGRIPSLPVW 97 (250)
T ss_pred hHHHHHHhCCCHHHH----HHHHHHHHHHhhcc-HHHHHHHHh--cchHHHHHHHHHHHHHHHHHHHHHHhCccCccchH
Confidence 589999999999777 99999999998875 889999999 999999999999999999887654 4678
Q ss_pred HHHHHHHHhhccchhhHhhhhhheeeeecCcchhHHHHHHHHHHHHHHHHHHHH-HHhhcCCchhHHHHHHHHHHHHHHh
Q 039541 174 IYSTIRFVAGFFRAPIMTSVIVLLSEMVSKRWRGQVVIIGFTFFSFGLVSLPAV-AYLSRGSSWKMLYVWTSIPSIVCCI 252 (521)
Q Consensus 174 ~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~i~~~i-~~~~~~~~wr~~f~~~~~~~~~~~~ 252 (521)
.+.+..++.|.+.+....+......+.+| ++||++.|+.-...+++..+-..+ ..+.++..-+..+.+...+.++.+
T Consensus 98 ~~~~~~~l~~~s~~~~~ta~lvt~~~NFP-~~RG~vvgilk~~~GLSaai~t~i~~~~f~~~~~~fll~la~~~~~v~l- 175 (250)
T PF06813_consen 98 LMCLFLFLGGNSSCWFNTASLVTCVRNFP-RSRGTVVGILKGFFGLSAAIFTQIYSAFFGDDPSSFLLFLAVLPAVVCL- 175 (250)
T ss_pred HHHHHHHHHcccHHHhhhHHHHHHHHhCc-cccCceehhhhHHHHhHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHH-
Confidence 88888899999887777777777778887 689999999999999988876655 555554344555444444444444
Q ss_pred hhceeeecch
Q 039541 253 IIYPFISESP 262 (521)
Q Consensus 253 ~~~~~~~esp 262 (521)
+...+++..|
T Consensus 176 ~~~~~vr~~~ 185 (250)
T PF06813_consen 176 VAMFFVRPVP 185 (250)
T ss_pred HHhhheeccC
Confidence 4445555443
No 194
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.01 E-value=3.4e-08 Score=98.38 Aligned_cols=132 Identities=13% Similarity=0.048 Sum_probs=99.4
Q ss_pred HHhHhHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHhcCCchH------HHHHHHHHHHHHHHHHHHHHHHHhhcccc
Q 039541 368 LLDIPAYLLTFILIERWSRKSSILTFCILSGTCSAICVAIGDEQE------VLQIGLELASFFSACVAFNVLLVFGTELF 441 (521)
Q Consensus 368 ~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~i~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 441 (521)
++..+|.++.|++.||+|||+.+..+..+.+++.+...+.++... ..+.+.-++.|++.+..++...+++.|.+
T Consensus 74 ~~~~ig~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~ 153 (432)
T PRK10406 74 LMRPIGGWLFGRIADKHGRKKSMLISVCMMCFGSLVIACLPGYETIGTWAPALLLLARLFQGLSVGGEYGTSATYMSEVA 153 (432)
T ss_pred HHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHhhhhhhHhhHHHHHHHhC
Confidence 455589999999999999999999999999999888877665421 24566677888888999999999999999
Q ss_pred CchhhhhhhHHHHHhhhhhhhHHHHHHHh----------hccchhHHHHHHHHHHHHHhHhhhccccC
Q 039541 442 TTCVRNSTTSLVRQAVNLGAAFSPVLISA----------GRQNEFLSFGVFGLVVFCFGFFVVFLPET 499 (521)
Q Consensus 442 ~~~~r~~~~~~~~~~~~~g~~~~p~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 499 (521)
|+++|+.+.++.......|.++++.+... ...++...|.+.++..++...+...++|.
T Consensus 154 p~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~F~i~~~~~ll~~~~~~~~~e~ 221 (432)
T PRK10406 154 VEGRKGFYASFQYVTLIGGQLLALLVVVVLQQTLEDAELREWGWRIPFALGAVLAVVALWLRRQLDET 221 (432)
T ss_pred CCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhccchHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 99999999988877767776666654332 13567778877666655543333334443
No 195
>PRK15075 citrate-proton symporter; Provisional
Probab=99.00 E-value=2.2e-09 Score=106.94 Aligned_cols=130 Identities=18% Similarity=0.159 Sum_probs=93.1
Q ss_pred cce-eeecceeeCCccccchhhHHHHHHHHHHhhhhhhhccccCCCCchHHHHHHHHHHHHHHHH----HhccccHHHHH
Q 039541 102 TTI-ISDWSLECAGSSILSGLPSSCFFIGCLLGGLALSTLGDSSSLGRKKLLFLSCFAMSITALA----TIFANNIWIYS 176 (521)
Q Consensus 102 ~~i-~~~~~~~~~~~~~~~~~~~s~~~lg~~i~~~~~g~l~dr~~~Grr~~l~~~~~~~~~~~~~----~~~~~~~~~l~ 176 (521)
|.+ ++.+|.+.++. ++....+.++..++.+++|+++|| +|||++++.+.++..+..+. ....+++..+.
T Consensus 262 p~~l~~~~g~~~~~~----~~~~~~~~~~~~~~~~~~g~l~Dr--~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (434)
T PRK15075 262 PTFGKTVLHLSAADS----LLVTLCVGVSNFIWLPIGGALSDR--IGRRPVLIAFTVLAILTAYPALSWLVAAPSFARML 335 (434)
T ss_pred HHHHHHhcCCCHHHH----HHHHHHHHHHHHHHHHHHHHHHHH--hcchHHHHHHHHHHHHHHHHHHHHHHcCCchHHHH
Confidence 443 44578887665 888888889999999999999999 99999988765544332211 11234454555
Q ss_pred HHHHHhhccchhhHhhhhhheeeeecCcchhHHHHHHHH-HHHHHHHHHHHH-HHhhcCCchh
Q 039541 177 TIRFVAGFFRAPIMTSVIVLLSEMVSKRWRGQVVIIGFT-FFSFGLVSLPAV-AYLSRGSSWK 237 (521)
Q Consensus 177 ~~r~l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~-~~~~G~~i~~~i-~~~~~~~~wr 237 (521)
+..++.|++.+...+....++.|.+|+++|+.++++... +..++..++|.+ +.+.+..|++
T Consensus 336 ~~~~~~~~~~g~~~~~~~~~~~e~~p~~~rg~~~g~~~~~~~~~~g~~~p~~~g~i~~~~g~~ 398 (434)
T PRK15075 336 AVELWLSFLYGSYNGAMVVALTEVMPAEVRTAGFSLAYSLATAIFGGFTPAISTWLIHVTGDK 398 (434)
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHHCCCCccchheeHHHHHHHHHHhhhHHHHHHHHHHhcCCc
Confidence 556666777777677777889999999999999998644 444456667777 7777777754
No 196
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.00 E-value=3.6e-08 Score=97.27 Aligned_cols=166 Identities=13% Similarity=0.000 Sum_probs=119.0
Q ss_pred HHHHHHHHHHHHhHHhhccCCCccHHHHHHHHHHH-hHhHHHHHHHHHhhc-----CCch-HHHHHHHHHHHHHHHHHhc
Q 039541 335 MALAFGIGVVYFGLLLGVGNLSFNIYLSLAFNGLL-DIPAYLLTFILIERW-----SRKS-SILTFCILSGTCSAICVAI 407 (521)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~l~dr~-----g~~~-~~~~~~~~~~i~~~~~~~~ 407 (521)
+.......+....+|.++++.|.+....+.+..+. -.+..++.|+++||+ |||| .+.++..+.+++...+.+.
T Consensus 9 ~~~~~~~~~~~~~~~~~l~~~g~~~~~ig~~~~~~~~~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~~~~l~~~~l~~~ 88 (402)
T PRK11902 9 FASGLPLALTSGTLQAWMTVEGLDIQTIGFFSLVGQAYIFKFLWAPLMDRYTPPLLGRRRGWLLLTQVGLAASIAAMAFC 88 (402)
T ss_pred HHHhhhHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHcccccCCCcchhHHHHHHHHHHHHHHHHHhc
Confidence 33444556666778999999898877666443322 247788999999999 7775 6777778887777776665
Q ss_pred CCch-HHHHHHHHHHHHHHHHHHHHHHHHhhccccCchhhhhhhHHHHHhhhhhhhHHHHHHHhh-c--cchhHHHHHHH
Q 039541 408 GDEQ-EVLQIGLELASFFSACVAFNVLLVFGTELFTTCVRNSTTSLVRQAVNLGAAFSPVLISAG-R--QNEFLSFGVFG 483 (521)
Q Consensus 408 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~~-~--~~~~~~~~~~~ 483 (521)
+... .+...+..++.+++.....+...+++.|.+|+++|+++.++......+|..+++.+.+.. . .++...|.+.+
T Consensus 89 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~al~~~~~~~~~r~~~~~~~~~g~~~g~i~g~~l~~~l~~~~~gw~~~f~i~a 168 (402)
T PRK11902 89 PPHAALWPLAGLAVLVAFLSASQDIVFDAYSTDVLHPEERGAGAAVKVLGYRLAMLVSGGLALWLADRVLGWGNTYLLMA 168 (402)
T ss_pred CccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhhHHHHHHHHHHHHHHHHHhHHHHHHHhcccCHHHHHHHHH
Confidence 4322 244455555566677777788999999999999999999999988888988888877642 2 36777787777
Q ss_pred HHHHHHhHhhhccccCC
Q 039541 484 LVVFCFGFFVVFLPETI 500 (521)
Q Consensus 484 ~~~~~~~~~~~~~~~~~ 500 (521)
++.++..+..+..+|++
T Consensus 169 ~~~l~~~l~~~~~~e~~ 185 (402)
T PRK11902 169 GLMLAGALTTLWAPEPE 185 (402)
T ss_pred HHHHHHHHHHHhcCCCc
Confidence 76666555555566553
No 197
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.00 E-value=3.1e-09 Score=103.57 Aligned_cols=153 Identities=18% Similarity=0.192 Sum_probs=113.3
Q ss_pred cceeeecceeeCCccccchhhHHHHHHHHHHhhhhhhhccccCCCCchHHHHHHHHHHHHHHHHHhccc----cH--H--
Q 039541 102 TTIISDWSLECAGSSILSGLPSSCFFIGCLLGGLALSTLGDSSSLGRKKLLFLSCFAMSITALATIFAN----NI--W-- 173 (521)
Q Consensus 102 ~~i~~~~~~~~~~~~~~~~~~~s~~~lg~~i~~~~~g~l~dr~~~Grr~~l~~~~~~~~~~~~~~~~~~----~~--~-- 173 (521)
..+-++-|++.+++ .+......+...+..+.+..+.|| +|||+.++++..+..+..+++.... .. |
T Consensus 294 t~i~~~aG~~~~~a----~~an~~~g~v~~~~t~~~~~lid~--~gRRpLll~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 367 (485)
T KOG0569|consen 294 TSIFKTAGFTPEEA----QYANLGIGIVNLLSTLVSPFLIDR--LGRRPLLLISLSLMAVALLLMSIALFLSNSFGSWLS 367 (485)
T ss_pred HHHHHHcCCCHHHH----HHHHHHHHHHHHHHHHHHHHHHHh--cCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHH
Confidence 45667778888776 888888888888999999999999 9999999999999999888876542 11 1
Q ss_pred -HHHHHHHH--hhccchhhHhhhhhheeeeecCcchhHHHHHHHHHHHHHHHHHHHH-HHhhcCCchhHHHHHHHHHHHH
Q 039541 174 -IYSTIRFV--AGFFRAPIMTSVIVLLSEMVSKRWRGQVVIIGFTFFSFGLVSLPAV-AYLSRGSSWKMLYVWTSIPSIV 249 (521)
Q Consensus 174 -~l~~~r~l--~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~i~~~i-~~~~~~~~wr~~f~~~~~~~~~ 249 (521)
..+++.++ ..++.| .-|...-+.+|.+|++.|..++++......+...+-... -.+-+..|= +.|.+..+++++
T Consensus 368 y~~i~~~~~~~~~f~~G-~gpi~~fi~aELf~~~~R~aa~s~~~~~~w~~~fiv~~~fp~l~~~~g~-~~filF~i~~~~ 445 (485)
T KOG0569|consen 368 YLCIAAIFLFIISFAIG-PGPIPWFIGAELFPQSARSAAQSVATAVNWLSNFIVGFAFPPLQNVIGP-YVFILFVIPLAI 445 (485)
T ss_pred HHHHHHHHHHHHhhhcC-CCchhHHHHHHhCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-hhhHHHHHHHHH
Confidence 12333333 333333 457778889999999999999999887777766554333 333332333 777788888888
Q ss_pred HHhhhceeeecch
Q 039541 250 CCIIIYPFISESP 262 (521)
Q Consensus 250 ~~~~~~~~~~esp 262 (521)
..+.+++.+|||.
T Consensus 446 ~~i~~~~~lPETk 458 (485)
T KOG0569|consen 446 FLIYLYRYLPETK 458 (485)
T ss_pred HHHHHHHhCcccC
Confidence 8889999999984
No 198
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=98.99 E-value=2.9e-07 Score=87.52 Aligned_cols=321 Identities=11% Similarity=-0.045 Sum_probs=172.4
Q ss_pred hhhHHHHHHHHHHhhhhhhhccccCCCCchHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHhhccchhhHhhhhhheee
Q 039541 120 GLPSSCFFIGCLLGGLALSTLGDSSSLGRKKLLFLSCFAMSITALATIFANNIWIYSTIRFVAGFFRAPIMTSVIVLLSE 199 (521)
Q Consensus 120 ~~~~s~~~lg~~i~~~~~g~l~dr~~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~ 199 (521)
+.+.-+-.+...+.-+.+.+..+| ...+.=..+..++..++.++.++++|.+.-+++-.+.+++.|........+..
T Consensus 62 ~~Vlladi~P~l~~Kl~aP~fi~~--v~y~~Ri~~~~~l~~~g~l~va~~~~v~~~l~Gv~las~ssg~GE~tfL~lt~- 138 (402)
T PF02487_consen 62 GAVLLADILPSLLVKLIAPFFIHR--VPYWIRILICVALSAAGMLLVAFSPSVWVRLLGVVLASLSSGLGEVTFLSLTH- 138 (402)
T ss_pred hHHHHHHHHHHHHHHHHhHhhhhh--ccchHHHHHHHHHHHHHHhheeeccchhHHHHHHHHHhhhhhhhHHHHHHHHH-
Confidence 556666667777777888888888 76554455666778889999999999999999999999999998888888754
Q ss_pred eecCcchhHHHHHHHHHHHHHHHHHHHHHHhhcCCc--hhHHHHHHHHHHHHHHhhhceeeecchhHHHhcCCHHHHHHH
Q 039541 200 MVSKRWRGQVVIIGFTFFSFGLVSLPAVAYLSRGSS--WKMLYVWTSIPSIVCCIIIYPFISESPRWLFIHGHEAEAMAV 277 (521)
Q Consensus 200 ~~~~~~rg~~~~~~~~~~~~G~~i~~~i~~~~~~~~--wr~~f~~~~~~~~~~~~~~~~~~~esp~~~~~~~~~~~~~~~ 277 (521)
.+++ ...+-+..+.+.+.++|+..-..+...+ -|..+.+...+.++..+..++.+|.++.. ...++
T Consensus 139 ~y~~----~~l~~wssGTG~aGl~Ga~~y~~lT~~g~s~~~tll~~~~lp~~~~~~~f~~L~~~~~~----~~~~~---- 206 (402)
T PF02487_consen 139 FYGK----SSLSAWSSGTGGAGLVGALYYLGLTTLGLSPRTTLLIMLVLPAIFLLSYFFLLPSPPTN----RPYQE---- 206 (402)
T ss_pred hcCc----cccccccCCcChhhHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHhhcccccc----CCCcc----
Confidence 4443 3567788888888888887733333244 47778877777766663444455543211 00000
Q ss_pred HHHHhhhcCCCCCCCccccccCCCCCccccCCCcccccccHHHHhc-cHHHHHHHHHHHHHHHHHHHHHHhH-H-hhccC
Q 039541 278 LKRLASRSNYQSDYGLESCCLSNMPPKAKNVIPKLDLYSSLKDLFN-RKWALRRLLTIMALAFGIGVVYFGL-L-LGVGN 354 (521)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~ 354 (521)
. ...++. +.+....+..+.+.+...+.++++-++ -+.+.+.++-..+.++.-.....++ + ..++.
T Consensus 207 -------~-~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~k~~~~k~Ll~ymiPL~lVY~aEY~InqGv~~tl~fp~ 274 (402)
T PF02487_consen 207 -------S-ESEDEA----EDDLLESETSESKPDSSSKLSFKEKLKRLKPLLWYMIPLFLVYFAEYFINQGVAPTLLFPN 274 (402)
T ss_pred -------c-CCCCcc----cccccccccccccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHhcCCc
Confidence 0 000000 000000000000000111112222111 1112222222222333222222221 1 12222
Q ss_pred CCccHH----HHHHHHHHHhHhHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHhcCCc-hHHHHHHHHHHHHHHHHHH
Q 039541 355 LSFNIY----LSLAFNGLLDIPAYLLTFILIERWSRKSSILTFCILSGTCSAICVAIGDE-QEVLQIGLELASFFSACVA 429 (521)
Q Consensus 355 ~~~~~~----~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 429 (521)
...+.. .......++-++++--..++ |+.+.+++.+...+..+.+++-.+..-. +.|...+..+.-|+..|..
T Consensus 275 ~~~~~r~~Y~~Y~~~YQ~GVFISRSS~~~~--rir~lwils~LQ~~nl~~~~l~s~~~fipsi~ivf~lif~eGLlGGa~ 352 (402)
T PF02487_consen 275 SFFSPRDQYRWYQLLYQLGVFISRSSLPFF--RIRRLWILSLLQVINLVFLLLQSWYRFIPSIWIVFVLIFYEGLLGGAS 352 (402)
T ss_pred cCCCHHHHHHHHHHHHHHHHhhhhcceeee--ehhhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhHH
Confidence 222221 22344444444443221111 2222222222222222222211111111 1255566777778888888
Q ss_pred HHHHHHhhccccCchhhhhhhHHHHHhhhhhhhHHHHHHH
Q 039541 430 FNVLLVFGTELFTTCVRNSTTSLVRQAVNLGAAFSPVLIS 469 (521)
Q Consensus 430 ~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~ 469 (521)
+...+..+.|..|+++|..++|.....-.+|..++.++.-
T Consensus 353 YVNtF~~I~~~~~~~~REFslg~vsvsds~GI~lAgll~l 392 (402)
T PF02487_consen 353 YVNTFYRISEEVPPEDREFSLGAVSVSDSLGILLAGLLGL 392 (402)
T ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 8888888888899999999999999888888887777653
No 199
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=98.99 E-value=2.2e-08 Score=97.57 Aligned_cols=116 Identities=10% Similarity=0.047 Sum_probs=87.6
Q ss_pred hccCCCccHHHHH---HHHHHHhHhHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHhcC-CchHHHHHHHHHHHHHHH
Q 039541 351 GVGNLSFNIYLSL---AFNGLLDIPAYLLTFILIERWSRKSSILTFCILSGTCSAICVAIG-DEQEVLQIGLELASFFSA 426 (521)
Q Consensus 351 ~~~~~~~~~~~~~---~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~i~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 426 (521)
+.++.+.+..... ....++..++.++.|++.||+|||+.+.++.++..++.+.+.+.. +. +...+..++.|++.
T Consensus 28 ~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~~~~~~~~~~--~~~~~~~~~~g~~~ 105 (366)
T TIGR00886 28 IKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKFGPRYTTTLSLLLLAIPCLWAGLAVQSY--SVLLLLRLFIGIAG 105 (366)
T ss_pred HHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHhhhH--HHHHHHHHHHHHhc
Confidence 5556666654433 445577788999999999999999999999999999888877765 33 45556666667664
Q ss_pred HHHHHHHHHhhccccCchhhhhhhHHHHHhhhhhhhHHHHHHH
Q 039541 427 CVAFNVLLVFGTELFTTCVRNSTTSLVRQAVNLGAAFSPVLIS 469 (521)
Q Consensus 427 ~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~ 469 (521)
+ .++....++.|.+|+++|+.+.++......+|..+++.+.+
T Consensus 106 ~-~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~ 147 (366)
T TIGR00886 106 G-SFASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMP 147 (366)
T ss_pred h-hhHhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHH
Confidence 3 45667788999999999999999988777777766665553
No 200
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=98.98 E-value=4.1e-08 Score=96.64 Aligned_cols=151 Identities=13% Similarity=0.004 Sum_probs=110.8
Q ss_pred HHhhccCCCccHHHHH---HHHHHHhHhHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHH
Q 039541 348 LLLGVGNLSFNIYLSL---AFNGLLDIPAYLLTFILIERWSRKSSILTFCILSGTCSAICVAIGDEQEVLQIGLELASFF 424 (521)
Q Consensus 348 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 424 (521)
.|.+.++.+.+..... ....++..++.++.|+++||+|||+.+..+..+..++.+.....++. +...+..++.++
T Consensus 31 ~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~--~~l~~~~~~~g~ 108 (394)
T PRK11652 31 IADMARDLNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRVGRRPVILVGMSIFILGTLVALFAHSL--TVLIAASAIQGL 108 (394)
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHHHccH--HHHHHHHHHHHh
Confidence 4556666666554333 44556777889999999999999999999988888887776665433 556666777787
Q ss_pred HHHHHHHHHHHhhccccCchhhhhhhHHHHHhhhhhhhHHHHHHHhh--ccchhHHHHHHHHHHHHHhH-hhhccccCC
Q 039541 425 SACVAFNVLLVFGTELFTTCVRNSTTSLVRQAVNLGAAFSPVLISAG--RQNEFLSFGVFGLVVFCFGF-FVVFLPETI 500 (521)
Q Consensus 425 ~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 500 (521)
+.+...+....+..|.++++.++.+.++.+....++..++|.+.+.. ..++...|.+.++..++..+ ..+..||++
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~ 187 (394)
T PRK11652 109 GTGVGGVMARTLPRDLYEGTQLRHANSLLNMGILVSPLLAPLIGGLLTTLFGWRACYLFLLLLGAGVTFSMARWMPETR 187 (394)
T ss_pred hhhHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHHHHHHHhCCccC
Confidence 77777777778888999999999999999888888999999888763 33566677766665544333 344556643
No 201
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=98.97 E-value=7.9e-09 Score=101.56 Aligned_cols=141 Identities=12% Similarity=0.028 Sum_probs=108.9
Q ss_pred eeecceeeCCccccchhhHHHHH-HHHHHhhhhhhhccccCCCCchHHHHHHHHHHHHHHHHHhc------cccHHHHHH
Q 039541 105 ISDWSLECAGSSILSGLPSSCFF-IGCLLGGLALSTLGDSSSLGRKKLLFLSCFAMSITALATIF------ANNIWIYST 177 (521)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~s~~~-lg~~i~~~~~g~l~dr~~~Grr~~l~~~~~~~~~~~~~~~~------~~~~~~l~~ 177 (521)
.+|.|++.++. |++..... .+..++.++.|++.|| +|+|+.+..+.++.++..+.... .++...+..
T Consensus 235 l~~~G~s~~~i----g~~~~~~~~~~~~~g~~~~g~l~~r--~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (390)
T TIGR02718 235 LVDAGWPLEWI----GRLGMAGGAVTVLLGCGGGAWLVRR--AGLWRTFILGVGLAGSLALLWFAQAAFWLAPGIAVAWS 308 (390)
T ss_pred HHhcCCCHHHH----HHHHhHHHHHHHHHHHHHHHHHHHH--hhHHHHHHHHHHHHHHHHHHHHHHHHcccCCcHHHHHH
Confidence 35579988666 88888775 4667788999999999 99999998877665333332221 234445555
Q ss_pred HHHHhhccchhhHhhhhhheeeeecC-cchhHHHHHHHHHHHHHHHHHHHH-HHhhcCCchhHHHHHHHHHHHHHH
Q 039541 178 IRFVAGFFRAPIMTSVIVLLSEMVSK-RWRGQVVIIGFTFFSFGLVSLPAV-AYLSRGSSWKMLYVWTSIPSIVCC 251 (521)
Q Consensus 178 ~r~l~G~~~g~~~~~~~~~i~~~~~~-~~rg~~~~~~~~~~~~G~~i~~~i-~~~~~~~~wr~~f~~~~~~~~~~~ 251 (521)
...+.+++.|...+...+.+.+..++ +++++.+++.+...++|..++|.+ |.+.+..||+..|++.+++.++..
T Consensus 309 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~g~~~~G~l~~~~G~~~~f~~~~~~~l~a~ 384 (390)
T TIGR02718 309 CSAFGSLITGITSVAIYTAFMRFAGDGDQAGTDVTAVQSTRDLGELIASSIAGYLTDRFGYAGGFLSGTVLAVLAI 384 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHH
Confidence 66677777787878888887777766 889999999999999999999999 778887899999998887776655
No 202
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=98.96 E-value=4e-09 Score=100.67 Aligned_cols=143 Identities=17% Similarity=0.224 Sum_probs=122.7
Q ss_pred ccchhhHHHHHHHHHHhhhhhhhccccCCCCchHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHhhccchhhHhhhhhh
Q 039541 117 ILSGLPSSCFFIGCLLGGLALSTLGDSSSLGRKKLLFLSCFAMSITALATIFANNIWIYSTIRFVAGFFRAPIMTSVIVL 196 (521)
Q Consensus 117 ~~~~~~~s~~~lg~~i~~~~~g~l~dr~~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~ 196 (521)
...|.+.+..-+.-++...+..++.+| +|.|+.++++..+..+=.++++++++.+.+.+.+.+.|+-.+........|
T Consensus 259 ~~~G~l~s~~v~~E~~~m~~~p~li~r--ig~k~~Lllag~i~~iRi~~~~~~~~~~~i~~~klLH~~e~~l~lva~fkY 336 (412)
T PF01306_consen 259 QMYGYLWSVQVFLEALMMFFSPWLINR--IGAKNLLLLAGVIMAIRIIGSGFATNPWVISLIKLLHALEFPLLLVAAFKY 336 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH--H-HHHHHHHHHHHHHHHHHHHHT--SHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHhHHHHHHHHHHHHHHHHHHHHHHh--cChHhHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445999999999999999999999999 999999999999999999999999999999999999999999999999999
Q ss_pred eeeeecCcchhHHHHH-HHHHHHHHHHHHHHH-HHhhcCCchhHHHHHHHHHHHHHHhhhceeeecc
Q 039541 197 LSEMVSKRWRGQVVII-GFTFFSFGLVSLPAV-AYLSRGSSWKMLYVWTSIPSIVCCIIIYPFISES 261 (521)
Q Consensus 197 i~~~~~~~~rg~~~~~-~~~~~~~G~~i~~~i-~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~~~es 261 (521)
+++.+|++..++...+ .+...++|.++.+.+ |.+.++.|.+..|++.+.+.++..++..+.+++.
T Consensus 337 I~~~fd~rlsAt~y~v~~~~~~~~~~~i~s~~~G~lyd~~G~~~tylimg~iv~~~~li~~f~l~~~ 403 (412)
T PF01306_consen 337 ITAHFDKRLSATLYLVGFQFAKQIGIIILSPLAGYLYDRIGFQHTYLIMGLIVLPFTLISAFTLKKD 403 (412)
T ss_dssp HHHHS-GGGHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS--S
T ss_pred HHHhCCHhHHHHHHHHHHHHHHHHHHHHHhhhHHhhHhhcCcHHHHHHHHHHHHHHHHHheeeecCC
Confidence 9999998888777777 467788888876665 8899999999999999988888776777776654
No 203
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=98.96 E-value=3.5e-08 Score=95.54 Aligned_cols=152 Identities=11% Similarity=-0.079 Sum_probs=103.5
Q ss_pred HhHHhhccCCCccHHHHH---HHHHHHhHhHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHH
Q 039541 346 FGLLLGVGNLSFNIYLSL---AFNGLLDIPAYLLTFILIERWSRKSSILTFCILSGTCSAICVAIGDEQEVLQIGLELAS 422 (521)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 422 (521)
...|.+.++++.+....+ ....++..++.+..|++.||+|||+++.........+........ +...+++.-++.
T Consensus 12 ~~lp~i~~~~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~R~l~ 89 (368)
T TIGR00903 12 PVLSLVAEDIDVSKEELGLLAITYPAAFLALTIPSGLLLDRAFKRWFLFGSLATFAAAAGRLLDPF--NYEWLLACQLLA 89 (368)
T ss_pred hhHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHhc--cHHHHHHHHHHH
Confidence 345666666665544433 344566778889999999999998876655444433322222112 225667777778
Q ss_pred HHHHHHHHHHHHHhhccccCchhhhhhhHHHHHhhhhhhhHHHHHHHhh--ccchhHHHHHHHHHHHHHhHh-hhccccC
Q 039541 423 FFSACVAFNVLLVFGTELFTTCVRNSTTSLVRQAVNLGAAFSPVLISAG--RQNEFLSFGVFGLVVFCFGFF-VVFLPET 499 (521)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 499 (521)
|++.+. .........|.+|+++|+++.++......+|..++|.+.+.. ..++...|.+.+++.++..++ .+.+||.
T Consensus 90 G~g~~~-~~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~~gWr~~f~~~~~l~~~~~~~~~~~lp~~ 168 (368)
T TIGR00903 90 ALGQPF-LLNAFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIYTAGGLQLLIIPIAAVAAAGIILVLAALPAL 168 (368)
T ss_pred HhHhHH-HHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 888775 445555568999999999999999999999999998887753 456777887777766655443 4566765
Q ss_pred C
Q 039541 500 I 500 (521)
Q Consensus 500 ~ 500 (521)
+
T Consensus 169 p 169 (368)
T TIGR00903 169 P 169 (368)
T ss_pred C
Confidence 4
No 204
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=98.96 E-value=3.5e-08 Score=99.68 Aligned_cols=170 Identities=11% Similarity=-0.051 Sum_probs=108.2
Q ss_pred HhccHH-HHHHHHHHHHHHHHHHHHHHhHHhh-ccCCCccHHHHHHHH---HHHhHhHHHHHHHHHhh-cCCchHHHHHH
Q 039541 321 LFNRKW-ALRRLLTIMALAFGIGVVYFGLLLG-VGNLSFNIYLSLAFN---GLLDIPAYLLTFILIER-WSRKSSILTFC 394 (521)
Q Consensus 321 l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~---~~~~~~~~~~~g~l~dr-~g~~~~~~~~~ 394 (521)
.+++|+ ++......+...++.......++.+ .++++.+........ ........+++|++.|| +|||+.+..+.
T Consensus 16 ~~~~p~~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~~~g~ 95 (500)
T PRK09584 16 AFKQPKAFYLIFSIELWERFGYYGLQGIMAVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIMLGA 95 (500)
T ss_pred hhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHH
Confidence 445553 3333333334444433333333333 355666544333222 22223344689999999 59999999999
Q ss_pred HHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHHHHHhhccccCchh--hhhhhHHHHHhhhhhhhHHHHHHHhh-
Q 039541 395 ILSGTCSAICVAIGDEQEVLQIGLELASFFSACVAFNVLLVFGTELFTTCV--RNSTTSLVRQAVNLGAAFSPVLISAG- 471 (521)
Q Consensus 395 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--r~~~~~~~~~~~~~g~~~~p~~~~~~- 471 (521)
++.+++..++.+.... .+...+..++.+++.+...+...++..|.+|++. |..+.++.+...++|.+++|.+.++.
T Consensus 96 ~~~~ig~~l~~~~~~~-~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~~gp~i~g~l~ 174 (500)
T PRK09584 96 IVLAIGYALVAWSGHD-AGIVYMGMATIAVGNGLFKANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSFFSMLATPWLA 174 (500)
T ss_pred HHHHHHHHHHHHhccc-HHHHHHHHHHHHHhhhcccCCHHHHHHHhcCCCchhhhhcchHHHHHHHHHHHHHHHHHHHHH
Confidence 9998887777664332 1334455566777777777788889999998643 45678888889999999999999863
Q ss_pred -ccchhHHHHHHHHHHHHHhH
Q 039541 472 -RQNEFLSFGVFGLVVFCFGF 491 (521)
Q Consensus 472 -~~~~~~~~~~~~~~~~~~~~ 491 (521)
..++...|.+.++..+++.+
T Consensus 175 ~~~g~~~~F~i~~i~~~i~~i 195 (500)
T PRK09584 175 AKYGWSVAFALSVVGMLITVV 195 (500)
T ss_pred HhhCHHHHHHHHHHHHHHHHH
Confidence 34677777776655454443
No 205
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=98.95 E-value=7.3e-10 Score=104.34 Aligned_cols=142 Identities=13% Similarity=-0.041 Sum_probs=114.1
Q ss_pred HHHHHHHHHHhHhHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 039541 360 YLSLAFNGLLDIPAYLLTFILIERWSRKSSILTFCILSGTCSAICVAIGDEQEVLQIGLELASFFSACVAFNVLLVFGTE 439 (521)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 439 (521)
........+...+++++.|++.||+.|++++.+|..+-.++.+...+.... |.+.++-.+.|++.....++..++++|
T Consensus 71 Gll~~vf~v~~~i~sPl~gyLadryNR~~v~~vG~~iW~~Av~~~~fs~~F--wq~~l~R~~vGiGeAs~~~ia~s~IaD 148 (493)
T KOG1330|consen 71 GLLQTVFIVVFMIASPLFGYLADRYNRKRVIAVGIFIWTLAVFASGFSNHF--WQVLLCRGFVGIGEASYSPIAPSLIAD 148 (493)
T ss_pred cchhHHHHHHHHHHHHHHHHHHhhcCcceEEeeHHHHHHHHHHHHHHHHHH--HHHHHHHHHhccchhhhcccchhHhhh
Confidence 344455667788899999999999999999999999999998888877333 788888899999999999999999999
Q ss_pred ccCchhhhhhhHHHHHhhhhhhhHHHHHHHh---hccchhHHHHHHHHHHHHHhHhh-hccccCCCCC
Q 039541 440 LFTTCVRNSTTSLVRQAVNLGAAFSPVLISA---GRQNEFLSFGVFGLVVFCFGFFV-VFLPETIGVT 503 (521)
Q Consensus 440 ~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~---~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 503 (521)
.+|.++|++++++.+....+|..+|-+.... ...++.+.|.+.+++.++..++. ++.+|.+++.
T Consensus 149 ~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va~~~~~Wr~af~~~avl~vi~~~L~~~f~~eP~rga 216 (493)
T KOG1330|consen 149 SFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVASLTFWWRWAFRGSAVLGVIVGLLVFLFVREPERGA 216 (493)
T ss_pred cCcchhhhHHHHHhhhhcccccceeEEeeeeeccCccceEEEEEeehHHHHHHHHHHHhhccCccccc
Confidence 9999999999999999998887766555443 22347778888888887766654 4555555443
No 206
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=98.94 E-value=3.8e-09 Score=96.82 Aligned_cols=109 Identities=16% Similarity=0.044 Sum_probs=87.3
Q ss_pred HHHHHHHHHHhHhHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 039541 360 YLSLAFNGLLDIPAYLLTFILIERWSRKSSILTFCILSGTCSAICVAIGDEQEVLQIGLELASFFSACVAFNVLLVFGTE 439 (521)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 439 (521)
...+...++..++.+...|.++||+|||.++..+.+..++...+.+...+. ..+...=++.|.+ -+..++..++++|
T Consensus 71 GflGSsF~ilQ~~sS~~~G~~SD~yGRkpvll~c~~~va~s~ll~~~S~~F--~afv~aR~l~Gi~-kgnl~v~rAiisd 147 (451)
T KOG2615|consen 71 GFLGSSFSILQFISSPLWGCLSDRYGRKPVLLACLIGVALSYLLWALSRNF--AAFVLARFLGGIF-KGNLSVIRAIISD 147 (451)
T ss_pred hhHhhHHHHHHHHhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHhhhhc-cCchHHHHHHHHh
Confidence 344455678889999999999999999999999999999987777765443 2222223444444 3345789999999
Q ss_pred ccCchhhhhhhHHHHHhhhhhhhHHHHHHHhh
Q 039541 440 LFTTCVRNSTTSLVRQAVNLGAAFSPVLISAG 471 (521)
Q Consensus 440 ~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~~ 471 (521)
+++++.|+.+++.++....+|.++||.++|+.
T Consensus 148 V~sek~r~l~ms~v~~a~~lGfilGPmIGgyl 179 (451)
T KOG2615|consen 148 VVSEKYRPLGMSLVGTAFGLGFILGPMIGGYL 179 (451)
T ss_pred hcChhhccceeeeeehhhhcchhhcchhhhHH
Confidence 99999999999999999999999999999873
No 207
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=98.93 E-value=2.4e-07 Score=90.84 Aligned_cols=110 Identities=10% Similarity=-0.011 Sum_probs=82.8
Q ss_pred CCCccHHHHH---HHHHHHhHhHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHhcC---CchHHHHHHHHHHHHHHHH
Q 039541 354 NLSFNIYLSL---AFNGLLDIPAYLLTFILIERWSRKSSILTFCILSGTCSAICVAIG---DEQEVLQIGLELASFFSAC 427 (521)
Q Consensus 354 ~~~~~~~~~~---~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~i~~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 427 (521)
+++.+..... .+..+...++++..|++.||+|.|+++.++..+..+..+...+.. ..+.+.+++..++.|++ +
T Consensus 64 ~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~G~R~v~~~~~ll~~i~~~~~~~a~~~~~~s~~~lli~r~l~Gig-g 142 (462)
T PRK15034 64 GFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIFGGRRWTVFSTAILIIPCVWLGIAVQNPNTPFGIFIVIALLCGFA-G 142 (462)
T ss_pred hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHcccCCCHHHHHHHHHHHHHH-H
Confidence 4666554433 334455556778889999999999999999999888888777641 12225677777788886 7
Q ss_pred HHHHHHHHhhccccCchhhhhhhHHHHHhhhhhhhHH
Q 039541 428 VAFNVLLVFGTELFTTCVRNSTTSLVRQAVNLGAAFS 464 (521)
Q Consensus 428 ~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~ 464 (521)
..++.....+++.+|+++||++.|+....+++|..++
T Consensus 143 ~~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l~ 179 (462)
T PRK15034 143 ANFASSMGNISFFFPKAKQGSALGINGGLGNLGVSVM 179 (462)
T ss_pred HhHHHHHHHHHHHCCHhHhHHHHHHHHHHHhhHHHHH
Confidence 7888999999999999999999999976666665543
No 208
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=98.93 E-value=3.6e-09 Score=119.02 Aligned_cols=142 Identities=15% Similarity=0.131 Sum_probs=119.4
Q ss_pred ceeeecceeeC-CccccchhhHHHHHHHHHHhhhhhhhccccCCCCchHHHHHHHHHHHHHHHHHhccccHHHHHHHHHH
Q 039541 103 TIISDWSLECA-GSSILSGLPSSCFFIGCLLGGLALSTLGDSSSLGRKKLLFLSCFAMSITALATIFANNIWIYSTIRFV 181 (521)
Q Consensus 103 ~i~~~~~~~~~-~~~~~~~~~~s~~~lg~~i~~~~~g~l~dr~~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l 181 (521)
.+.+++|.+.. +. +++.+...++.+++++++|+++|| +++|+++.++.++.+++.++..+..+.+.+++..++
T Consensus 258 ~~~~~~g~s~~~~~----g~~~~~~~ig~~~g~~~~g~l~~r--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (1146)
T PRK08633 258 YAKEVLGLDNTFQV----QYLLAASAIGIGIGSLLAGRLSGR--HIELGLVPLGALGLALSLFLLPTAPSLASVLVLFFL 331 (1146)
T ss_pred HHHHHhCCCcHHHH----HHHHHHHHHHHHHHHHHHHHHhCC--ceEccchhHHHHHHHHHHHHHHHhhhHHHHHHHHHH
Confidence 34566788775 44 999999999999999999999999 999999999999998988888888899999999999
Q ss_pred hhccchhhHhhhhhheeeeecCcchhHHHHHHHHHHHHHHHHHHHHHHhhc--CCchhHHHHHHHHHHHHH
Q 039541 182 AGFFRAPIMTSVIVLLSEMVSKRWRGQVVIIGFTFFSFGLVSLPAVAYLSR--GSSWKMLYVWTSIPSIVC 250 (521)
Q Consensus 182 ~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~i~~~i~~~~~--~~~wr~~f~~~~~~~~~~ 250 (521)
.|++.+...+...+++.+..|+++||+++++.+....+|.++++.++.++. ..++...|++.+.+.++.
T Consensus 332 ~g~~~~~~~~~~~~~~~~~~p~~~rg~~~~~~~~~~~lg~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 402 (1146)
T PRK08633 332 FGFSAGLFIVPLNALIQFRAPEKELGKVLAANNFLQNVGMLLFLALTTLFSGLGLSPAGLFYLIALVTLIG 402 (1146)
T ss_pred HHHHHHHhhHHHHHHHhhcCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999988887755443 245666666655554443
No 209
>TIGR00901 2A0125 AmpG-related permease.
Probab=98.92 E-value=5.9e-08 Score=94.15 Aligned_cols=156 Identities=13% Similarity=-0.014 Sum_probs=107.0
Q ss_pred HHHHhHHhhccCCCccHHHHHHHHHH--HhHhHHHHHHHHHhhc-----CCchH-HHHHHHHHHHHHHHHHhcCCchH-H
Q 039541 343 VVYFGLLLGVGNLSFNIYLSLAFNGL--LDIPAYLLTFILIERW-----SRKSS-ILTFCILSGTCSAICVAIGDEQE-V 413 (521)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~g~l~dr~-----g~~~~-~~~~~~~~~i~~~~~~~~~~~~~-~ 413 (521)
......|.+.++.|.+....+....+ ... ..++.|+++||+ ||||. +..+.++.++....+.+...... +
T Consensus 6 ~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~-~~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~~~~~~~~l~ 84 (356)
T TIGR00901 6 LVGNTLPYWLRSKNVSLKTIGFFSLVGLPYS-LKFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILSFLVPSTDLP 84 (356)
T ss_pred hHHhHHHHHHHHcCCCHHHHHHHHHHHHHHH-HHHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHHcCCcchhHH
Confidence 34455677788888776655554422 222 378999999998 88886 45666666666556655543222 3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccccCchhhhhhhHHHHHhhhhhhhHHHHHHHhh--ccc--------hhHHHHHHH
Q 039541 414 LQIGLELASFFSACVAFNVLLVFGTELFTTCVRNSTTSLVRQAVNLGAAFSPVLISAG--RQN--------EFLSFGVFG 483 (521)
Q Consensus 414 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~~--~~~--------~~~~~~~~~ 483 (521)
......++.+++.....+...+++.|.+|+++|+.+.++......+|.+++|.+.+.. ..+ +...|.+.+
T Consensus 85 ~l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~~~~g~~~~~~~~wr~~f~i~a 164 (356)
T TIGR00901 85 LLAGLAFLIAFFSATQDIALDAWRLEILSDEELGYGSTIYIVGYRAGMLLSGSLALVLASPEFANTGLITLWGYIFFWTA 164 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhchHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccHHHHHHHH
Confidence 4444555556666667788899999999999999999999999999999999888642 223 666777777
Q ss_pred HHHHHHhHhhh-ccccC
Q 039541 484 LVVFCFGFFVV-FLPET 499 (521)
Q Consensus 484 ~~~~~~~~~~~-~~~~~ 499 (521)
++.+++.+..+ ..+|.
T Consensus 165 i~~l~~~~~~~~~~~e~ 181 (356)
T TIGR00901 165 LLILPGLLVTLFLAKEP 181 (356)
T ss_pred HHHHHHHHHHHHhccCC
Confidence 76666554444 34554
No 210
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=98.91 E-value=4e-08 Score=98.71 Aligned_cols=145 Identities=10% Similarity=-0.058 Sum_probs=101.4
Q ss_pred ccCCCccHHHHH---HHHHHHhHhHHHHHHHHHhh-cCCchHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHH
Q 039541 352 VGNLSFNIYLSL---AFNGLLDIPAYLLTFILIER-WSRKSSILTFCILSGTCSAICVAIGDEQEVLQIGLELASFFSAC 427 (521)
Q Consensus 352 ~~~~~~~~~~~~---~~~~~~~~~~~~~~g~l~dr-~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 427 (521)
.++++.+..... ........+..+++|+++|| +|||+++.++.++..++.+.+.+..... ...++...+.+++.+
T Consensus 42 ~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~~~g~~~~~~g~~~~~~~~~~~-~ll~~~~~l~~ig~g 120 (489)
T PRK10207 42 VKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTIVLGAIVLAIGYFMTGMSLLKP-DLIFIALGTIAVGNG 120 (489)
T ss_pred HHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHHHHHHHHHHHHHHHHHHHhccch-hHHHHHHHHHHhccc
Confidence 344565443333 22333444556789999999 9999999999999999988887654322 233355666677777
Q ss_pred HHHHHHHHhhccccCchh--hhhhhHHHHHhhhhhhhHHHHHHHhh--ccchhHHHHHHHHHHHHHhHhhhccc
Q 039541 428 VAFNVLLVFGTELFTTCV--RNSTTSLVRQAVNLGAAFSPVLISAG--RQNEFLSFGVFGLVVFCFGFFVVFLP 497 (521)
Q Consensus 428 ~~~~~~~~~~~~~~~~~~--r~~~~~~~~~~~~~g~~~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 497 (521)
...+...+++.|.+|++. |+.+.++.+...++|.+++|.+.++. ..++.+.|.+.++..+++.+.+...+
T Consensus 121 ~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l~g~l~~~~gw~~~F~i~~i~~~~~~~~~~~~~ 194 (489)
T PRK10207 121 LFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSLAPVIADKFGYSVTYNLCGAGLIIALLVYFACR 194 (489)
T ss_pred cccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHHHHHHHHHhhChHHHHHHHHHHHHHHHHHHHHcc
Confidence 778888899999998874 57789999999999999999988863 34566777765554444444443333
No 211
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=98.89 E-value=2.6e-08 Score=94.02 Aligned_cols=133 Identities=11% Similarity=0.137 Sum_probs=106.8
Q ss_pred ecceeeCCccccchhhHHHHHHHHHHhhhhhhhccccCCCCchHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHhhccc
Q 039541 107 DWSLECAGSSILSGLPSSCFFIGCLLGGLALSTLGDSSSLGRKKLLFLSCFAMSITALATIFANNIWIYSTIRFVAGFFR 186 (521)
Q Consensus 107 ~~~~~~~~~~~~~~~~~s~~~lg~~i~~~~~g~l~dr~~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~ 186 (521)
.+|+++++. ++..+.+..+..+|.++.+++.|| +|+|+.+.++..+..++.++....++...+ .+-++.|++.
T Consensus 172 ~~g~s~~~a----~~~~s~~~~~~~iGr~~~~~l~~r--~g~~~~l~~~~~l~~~~~~l~~~~~~~~~~-~~~~l~g~~~ 244 (310)
T TIGR01272 172 ALGLPEDQA----AHFTAYTWGGAMVGRFIGSAVMPM--ISQGRYLAFNAFLAVLLSIGAALTHGYVAM-WFVLALGLFN 244 (310)
T ss_pred cCCCCHHHH----HHHHHHHHHHHHHHHHHHHHHHHH--hCHHHHHHHHHHHHHHHHHHHHHcCCHHHH-HHHHHHHHHH
Confidence 468888666 999999999999999999999999 999999998888888887776666554433 4566889999
Q ss_pred hhhHhhhhhheeeeecCcchhHHHHHHHHHHHHHHHHHHHH-HHhhcCCchhHHHHHHHHHHH
Q 039541 187 APIMTSVIVLLSEMVSKRWRGQVVIIGFTFFSFGLVSLPAV-AYLSRGSSWKMLYVWTSIPSI 248 (521)
Q Consensus 187 g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~i~~~i-~~~~~~~~wr~~f~~~~~~~~ 248 (521)
+..+|...+...+..|+ +.+++.++. ....+|.++.|.+ |.+.+..|.+..|++..+..+
T Consensus 245 s~i~P~~~s~a~~~~~~-~~~~asai~-~~~~~Gg~i~P~l~G~lad~~g~~~a~~v~~~~~~ 305 (310)
T TIGR01272 245 SIMFPTIFSLALNALGR-HTSQGSGIL-CLAIVGGAIVPLLQGSLADCLGIQLAFALPVPCYL 305 (310)
T ss_pred HHHHHHHHHHHHhhhhh-hhhhhHHHH-HHHHhcchHHHHHHHHHHHhccchHHHHHHHHHHH
Confidence 99999999999888874 456667775 4566888888876 888888899998875544433
No 212
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=98.89 E-value=1.3e-08 Score=102.67 Aligned_cols=134 Identities=13% Similarity=-0.022 Sum_probs=104.8
Q ss_pred HHHHHHHhHhHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHHHHHhhccccC
Q 039541 363 LAFNGLLDIPAYLLTFILIERWSRKSSILTFCILSGTCSAICVAIGDEQEVLQIGLELASFFSACVAFNVLLVFGTELFT 442 (521)
Q Consensus 363 ~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 442 (521)
.....++..++.++.|++.||+|+|+.+..+.++..++.++..+......+..++.-++.|++.+..++....++.|.+|
T Consensus 82 ~s~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~~~~~~~~~~~~~~~~~ 161 (465)
T TIGR00894 82 LSSHFYGQIIIQIPVGYLAGKYVFKWSIGIGMFLSSVISIVIPWAAGGGIALVVFCRVIQGLAQGSVSPATHKIIVKWAP 161 (465)
T ss_pred HHHHHHHHHHHHcchHHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHhcccchhhHHHHHHhcCC
Confidence 34455677889999999999999999999998888777666543322222456667788888888899999999999999
Q ss_pred chhhhhhhHHHHHhhhhhhhHHHHHHHhh--c-cchhHHHHHHHHHHHHHhHhhhcc
Q 039541 443 TCVRNSTTSLVRQAVNLGAAFSPVLISAG--R-QNEFLSFGVFGLVVFCFGFFVVFL 496 (521)
Q Consensus 443 ~~~r~~~~~~~~~~~~~g~~~~p~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~ 496 (521)
++.|+++.++......+|.+++|.+.+.. . .++...|.+.++..++..++++..
T Consensus 162 ~~~r~~~~~~~~~~~~~g~~i~~~l~~~l~~~~~gw~~~f~i~~~~~~~~~~~~~~~ 218 (465)
T TIGR00894 162 PKERSRLLGMSTSGFQLGTFIFLPISGWLCESWGGWPMIFYVFGIVGCAWSLLWFVF 218 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCeehhhhhHHHHHHHHHHHHH
Confidence 99999999999999999999999998752 3 266777887777766655554443
No 213
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=98.89 E-value=8.2e-09 Score=96.54 Aligned_cols=150 Identities=16% Similarity=0.118 Sum_probs=129.7
Q ss_pred eeecceeeCCccccchhhHHHHHHHHHHhhhhhhhccccCCCCchHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHhhc
Q 039541 105 ISDWSLECAGSSILSGLPSSCFFIGCLLGGLALSTLGDSSSLGRKKLLFLSCFAMSITALATIFANNIWIYSTIRFVAGF 184 (521)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~s~~~lg~~i~~~~~g~l~dr~~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~ 184 (521)
++++|++..|. .++.-...+..++|++++|++.|| +|.|+++.+++++..+.++...+...-..+.+.-.+.|+
T Consensus 280 ~~~~gls~~~l----ll~g~~~~vvA~lg~ii~g~Ld~r--fg~k~vl~~~lvi~~~~~~~~~~~~~~~~f~i~gll~g~ 353 (438)
T COG2270 280 AADLGLSSTEL----LLIGIALSVVAALGAIIAGFLDER--FGSKPVLMIGLVILSIAALYLIFLEGELDFWILGLLVGT 353 (438)
T ss_pred HHHcCccHHHH----HHHHHHHHHHHHHHHHHHHHHHHH--hCCceeehHHHHHHHHHHHHHHHccccHHHHHHHHHHHH
Confidence 45999999777 888888888899999999999999 999999999999999999999888888888888899999
Q ss_pred cchhhHhhhhhheeeeecCcchhHHHHHHHHHHHHHHHHHHHH-HHhhcC-CchhHHHHHHHHHHHHHHhhhceeeecc
Q 039541 185 FRAPIMTSVIVLLSEMVSKRWRGQVVIIGFTFFSFGLVSLPAV-AYLSRG-SSWKMLYVWTSIPSIVCCIIIYPFISES 261 (521)
Q Consensus 185 ~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~i~~~i-~~~~~~-~~wr~~f~~~~~~~~~~~~~~~~~~~es 261 (521)
..|.....+-+|.++..|+++-++.+|+++...-.+..+||.+ +.+.+. .+-|.-+....++.++.+ +..+.+|+.
T Consensus 354 s~G~~qA~SRSy~~~lvp~~k~~~fFglyaltgra~S~~gp~lv~v~t~iTg~~r~g~~~i~vll~iGl-~~L~~v~~~ 431 (438)
T COG2270 354 SLGGAQASSRSYLARLVPKGKEGRFFGLYALTGRAASFLGPFLVAVITQITGSSRAGVLSIIVLLLIGL-LLLLRVKVP 431 (438)
T ss_pred hcchHHHHHHHHHHHhCCCccccceeehhhhhhhHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHhhH-hhEEeecCC
Confidence 9999999999999999999999999999999999999999988 665542 357777776666666666 556666653
No 214
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=98.88 E-value=5.6e-09 Score=95.14 Aligned_cols=124 Identities=19% Similarity=0.105 Sum_probs=96.6
Q ss_pred HHHHHhhhhhhhccccCCCCchHHHHHHHHHHHHHHHHHhccccHH----HHHHHHHHhhccchhhHhhhhhheeeeecC
Q 039541 128 IGCLLGGLALSTLGDSSSLGRKKLLFLSCFAMSITALATIFANNIW----IYSTIRFVAGFFRAPIMTSVIVLLSEMVSK 203 (521)
Q Consensus 128 lg~~i~~~~~g~l~dr~~~Grr~~l~~~~~~~~~~~~~~~~~~~~~----~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~ 203 (521)
+.-.-|.++.+.+.|| +|||+.+...++++++..++.-.+.+-. .+..+|++ .++.+.+.+.|..|.+|.
T Consensus 392 laefPGlLIt~~iver--lGRKkTMal~l~~f~iflfll~~c~~rn~~tvllf~araf----isg~fqvaYvYtPEVyPT 465 (528)
T KOG0253|consen 392 LAEFPGLLITGVIVER--LGRKKTMALSLILFGIFLFLLTTCKTRNAYTVLLFTARAF----ISGAFQVAYVYTPEVYPT 465 (528)
T ss_pred HhhCCchhHHHHHHHH--hcchhHHHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHH----HhchheEEEEecCcccch
Confidence 3444678889999999 9999999999999999999887765433 33445554 455677889999999999
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHhhhceeee
Q 039541 204 RWRGQVVIIGFTFFSFGLVSLPAVAYLSRGSSWKMLYVWTSIPSIVCCIIIYPFIS 259 (521)
Q Consensus 204 ~~rg~~~~~~~~~~~~G~~i~~~i~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~~~ 259 (521)
+-|+...|.-....-+|.++.|+++... ..+-..+..+.+...++.. ++..++|
T Consensus 466 avRatgvGtcSsmaRIggI~~p~iA~~~-e~s~sl~i~vy~~~~ilag-IavcffP 519 (528)
T KOG0253|consen 466 AVRATGVGTCSSMARIGGIFSPVIAMRA-ELSTSLPIFVYGALFILAG-IAVCFFP 519 (528)
T ss_pred hhhhcchhhhhhHHhhhhhhhhHHHHHh-ccceeehHHHHHHHHHHHH-HHheeee
Confidence 9999999999999999999999998433 3345556666677777777 4555555
No 215
>PTZ00207 hypothetical protein; Provisional
Probab=98.88 E-value=1.1e-07 Score=96.05 Aligned_cols=143 Identities=8% Similarity=-0.063 Sum_probs=100.3
Q ss_pred HhhccCCCccHHHHHHHHHHHhH--hHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHhcCC----chHHHHHHHHHHH
Q 039541 349 LLGVGNLSFNIYLSLAFNGLLDI--PAYLLTFILIERWSRKSSILTFCILSGTCSAICVAIGD----EQEVLQIGLELAS 422 (521)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~g~l~dr~g~~~~~~~~~~~~~i~~~~~~~~~~----~~~~~~~~~~~~~ 422 (521)
+.+.++++.+......+..++.. .+.++.|++.||+|+|+++.++.++..++.++.++... .+.+.+.+..++.
T Consensus 51 ~~L~~~lgls~~~l~~i~svg~~~g~~~lp~G~L~Dr~G~R~vllig~ll~~iG~ll~ala~~~~i~~s~~~l~l~r~l~ 130 (591)
T PTZ00207 51 GAMQARYNLTQRDLSTITTVGIAVGYFLLPYSFIYDYLGPRPIFVLSMTVFCLGTLLFALTFQEVIEGSVVRLSVYNGLM 130 (591)
T ss_pred HHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhcccccCcHHHHHHHHHHH
Confidence 44455666655444433333222 24457899999999999999999999999988877521 1225566677788
Q ss_pred HHHHHHHHHHHHHhhccccCchhhhhhhHHHHHhhhhhhhH-HHHHHHhhccchhHHHHHHHHHHHHHhHh
Q 039541 423 FFSACVAFNVLLVFGTELFTTCVRNSTTSLVRQAVNLGAAF-SPVLISAGRQNEFLSFGVFGLVVFCFGFF 492 (521)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 492 (521)
|++.+..++.....+.+.+| +.||.+.|+......+|+++ +|+..++...++...+.+.+++.++..++
T Consensus 131 G~G~~~~~~~~~~~i~~~Fp-~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~~~~~~~~fl~l~vl~~vv~ll 200 (591)
T PTZ00207 131 TLGCMLFDLGAVVTVLSVFP-SNRGAVVAIMKTFTGLGSAILGSIQLAFFSDNTSAYFFFLMSFALVVGIL 200 (591)
T ss_pred HHHHHHHHHHHHHHHHHhCh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHH
Confidence 88877777777778888887 67899999999999999874 55555554444556666666666554444
No 216
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=98.88 E-value=1.1e-05 Score=79.25 Aligned_cols=260 Identities=14% Similarity=0.167 Sum_probs=154.0
Q ss_pred cceeeecceeeC--CccccchhhHHHHHHHHHHh-hhhhhhccccCCCCchHHHHHHHHHHHHHHHHHhcc----c----
Q 039541 102 TTIISDWSLECA--GSSILSGLPSSCFFIGCLLG-GLALSTLGDSSSLGRKKLLFLSCFAMSITALATIFA----N---- 170 (521)
Q Consensus 102 ~~i~~~~~~~~~--~~~~~~~~~~s~~~lg~~i~-~~~~g~l~dr~~~Grr~~l~~~~~~~~~~~~~~~~~----~---- 170 (521)
.++++.+.++.. .. ....++-+...+...+. .++.+++++| ++|++++.+....+.+..++.++. +
T Consensus 27 R~lKD~lvv~~~~~ga-e~i~fLk~~~~lp~~~~~~~ly~~l~~~--~~~~~lf~~~~~~F~~~f~lF~~vl~p~~~~~~ 103 (472)
T TIGR00769 27 RDTKDTLVVTAKGSGA-EIIPFLKTWVVVPMAVIFMLIYTKLSNI--LSKEALFYTVISPFLGFFALFAFVIYPLSDLLH 103 (472)
T ss_pred HhhhhheeecccCCch-hhHHHHHHHHHHHHHHHHHHHHHHHHhc--CCHHHhHHHHHHHHHHHHHHHHHHHhcchhhcC
Confidence 455666666432 11 33488888887777777 8999999999 999999988777777666665554 1
Q ss_pred -----------------------cHHHHHHHHHHhhccchhhHh-hhhhheeeeecCcchhHHHHHHHHHHHHHHHHHHH
Q 039541 171 -----------------------NIWIYSTIRFVAGFFRAPIMT-SVIVLLSEMVSKRWRGQVVIIGFTFFSFGLVSLPA 226 (521)
Q Consensus 171 -----------------------~~~~l~~~r~l~G~~~g~~~~-~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~i~~~ 226 (521)
+.|..-+..+...+-...... .-..++.|.+..++-.|..+++..+.++|.++++.
T Consensus 104 p~~~~~~~~~~~~~~~~~~i~~~~~W~~~~FYv~~elw~~~vvS~lFW~fandi~t~~qakRfy~l~~~ganlg~i~sg~ 183 (472)
T TIGR00769 104 PTALADKLLSLLPPGFMGFIAILRIWSFALFYVMAELWGSVVLSLLFWGFANQITTIDEAKRFYALFGLGANVALIFSGR 183 (472)
T ss_pred CcHHHHHHHhhcchhhHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 123333444455555455554 67789999999999999999999999999999997
Q ss_pred H-HHhhc--------CCchh----HHHHHHHHHHHHHHhhhceeeecchhHHHhcCCHHHHHHHHHHHhhhcCCCCCCCc
Q 039541 227 V-AYLSR--------GSSWK----MLYVWTSIPSIVCCIIIYPFISESPRWLFIHGHEAEAMAVLKRLASRSNYQSDYGL 293 (521)
Q Consensus 227 i-~~~~~--------~~~wr----~~f~~~~~~~~~~~~~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (521)
+ .++.+ ...|. ..+.+.++..++.. .+...+.+.. ..+.+. .
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~~~~~~-~~~~~l~~~~---~~~~~~-------------------~-- 238 (472)
T TIGR00769 184 TIKYFSKLRASLGPGVDGWHVSLKNLMVIVICSGLAII-LLYWWVNRNV---LTDPRS-------------------Y-- 238 (472)
T ss_pred HHHHHHHhhhccccccChHHHHHHHHHHHHHHHHHHHH-HHHHHHHhcc---cCCccc-------------------c--
Confidence 7 55441 12342 23333333333333 3332221100 000000 0
Q ss_pred cccccCCCCCccccCCCcccccccHHHHhccHHHHHHHHHHHHHHHHHHHHHHhHHhhccCCCccH-------HHHHHHH
Q 039541 294 ESCCLSNMPPKAKNVIPKLDLYSSLKDLFNRKWALRRLLTIMALAFGIGVVYFGLLLGVGNLSFNI-------YLSLAFN 366 (521)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~ 366 (521)
+.+ .++++++++.+..++++.++++|.++...+...+.....+..++..-....+...++ .......
T Consensus 239 -~~~-----~~~~k~k~k~~~~es~k~i~~S~yL~~ia~~vi~y~~~~nlve~~~k~~v~~~~p~~~~~~~f~g~~~~~~ 312 (472)
T TIGR00769 239 -NPA-----LKEKKVKPKMSTMESLKFLVSSPYILDLALLVIAYGISINLVEVTWKSKLKAQYPSPNEYSAFMGDFSTWT 312 (472)
T ss_pred -chh-----hccccCCCCCCHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
Confidence 000 011112223444568899999998777777777777777766654322222211111 1122334
Q ss_pred HHHhHhHHHHHHHHHhhcCCchHHHHHHH
Q 039541 367 GLLDIPAYLLTFILIERWSRKSSILTFCI 395 (521)
Q Consensus 367 ~~~~~~~~~~~g~l~dr~g~~~~~~~~~~ 395 (521)
++..++..++.+++.+|+|-+....+.=+
T Consensus 313 gi~tl~~~l~~~~l~~~~Gw~~~a~i~Pi 341 (472)
T TIGR00769 313 GVVSVTMMLLSGNVIRKYGWLTAALITPL 341 (472)
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHHHH
Confidence 45555566667999999998765544333
No 217
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=98.87 E-value=4.6e-08 Score=88.44 Aligned_cols=363 Identities=13% Similarity=0.050 Sum_probs=214.4
Q ss_pred eecceeeCCccccchhhHHHHHHHHHHhhhhhhhccccCCCCchHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHhhcc
Q 039541 106 SDWSLECAGSSILSGLPSSCFFIGCLLGGLALSTLGDSSSLGRKKLLFLSCFAMSITALATIFANNIWIYSTIRFVAGFF 185 (521)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~s~~~lg~~i~~~~~g~l~dr~~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~ 185 (521)
.+-+++.++. ..-+.-...-.+.+.-.+.=.+.|. .-.||++++-.+......++..+.++.+.+=+.-++.|..
T Consensus 34 p~~NlT~~~l---~~evyPvwTYSYLv~LvpvFlLTD~--lrYKPvivlq~ls~v~~w~~lv~g~sV~~mQvlE~FyG~~ 108 (433)
T KOG3810|consen 34 PDKNLTEDQL---TNEVYPVWTYSYLVGLVPVFLLTDY--LRYKPVVVLQALSGVPVWIMLVFGPSVKAMQVLEFFYGPA 108 (433)
T ss_pred CCCCccHHHH---hcccccchhHHHHHHHHHHHHHhhh--hhcceeeeeeccchhHHHHHHHhcCCchheeeehhhcChH
Confidence 3445555443 1223333444555666677779998 8889999988888888888888999999999999999998
Q ss_pred chhhHhhhhhheeeeecCcchhHHHHHHHHHHHHHHHHHHHHHHhhc---CCchhHHHHHHHHHHHHHHhhhceeeecch
Q 039541 186 RAPIMTSVIVLLSEMVSKRWRGQVVIIGFTFFSFGLVSLPAVAYLSR---GSSWKMLYVWTSIPSIVCCIIIYPFISESP 262 (521)
Q Consensus 186 ~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~i~~~i~~~~~---~~~wr~~f~~~~~~~~~~~~~~~~~~~esp 262 (521)
.+ ...+-++|+-+..+|+++.++.+...+..-.|...|..++-++- ..+.+..-.+......+.. +..+++|..+
T Consensus 109 tA-aEIAYysYIYs~Vd~~~Yqrvt~y~RaA~L~g~~~g~vlaQlLvs~~~~sy~~LN~ISL~~~~ia~-~~A~fLP~v~ 186 (433)
T KOG3810|consen 109 TA-AEIAYYSYIYSKVDPEMYKRVTGYCRAAFLVGKFVGSVLAQLLVSLETLSYTTLNYISLAEVTIAV-LLALFLPRVK 186 (433)
T ss_pred HH-HHHhhhheeeeecCHHHHHHHHHHhHHHHHHHhHHHhHHHHHHhhhcccchhhhchhhHHHHHHHH-HHHhhCCCCc
Confidence 76 77888999999999999999999999999999988888864432 2334444444333333333 5556777765
Q ss_pred hHHHhcCCHHHHHHHHHHHhhhcCCCCCCCccccccCCCCCccccCC----CcccccccHHHHhccHHHHHHHHHHHHHH
Q 039541 263 RWLFIHGHEAEAMAVLKRLASRSNYQSDYGLESCCLSNMPPKAKNVI----PKLDLYSSLKDLFNRKWALRRLLTIMALA 338 (521)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 338 (521)
+.+.-+.+.++. + ..+.++...+.+... .-...+..+.+..++|.++...+-..+..
T Consensus 187 rSl~f~~~~~~~-----------~--------v~~~e~~~~~~~~~~~l~~~~~~l~~~l~~~y~np~ll~WSlWwAl~s 247 (433)
T KOG3810|consen 187 RSLYFHRLEDKI-----------S--------VGDLEEMNPQASYMSYLRGAFVLLWRDLQECYSNPRLLKWSLWWALAS 247 (433)
T ss_pred hhhhhhcccccc-----------e--------eccchhcCccchhhHHHHHHHHHHHHHHHHHhcCchhhhhHHHHHHhh
Confidence 433322221110 0 000011111100000 00011224556667777655544444444
Q ss_pred HHH-HHHHHhHHhhccCCCccH----HHHHHHHHHHhHhHHHHHHHHHhhcCCchH--HHHHHHHHHHHHHHHHhcCCch
Q 039541 339 FGI-GVVYFGLLLGVGNLSFNI----YLSLAFNGLLDIPAYLLTFILIERWSRKSS--ILTFCILSGTCSAICVAIGDEQ 411 (521)
Q Consensus 339 ~~~-~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~--~~~~~~~~~i~~~~~~~~~~~~ 411 (521)
.+. ...+|...++-+....+. +..-.+..+.+.++.+..|.+.-++.|+.- +.++.+..+-..+.+.... +
T Consensus 248 cg~~QV~nY~Q~LW~~~~~~~~~vyNG~veAv~tlLGa~~~~~~g~l~i~w~r~g~~ll~~~s~~~agllf~m~~t~--~ 325 (433)
T KOG3810|consen 248 CGYYQVTNYTQILWKEVAPNPANVYNGAVEAVSTLLGAIAALAAGYLNINWNRWGDLLLAVGSAVQAGLLFIMAQTQ--H 325 (433)
T ss_pred chhHHHHHHHHHHHHhhCCCchhhhcCHHHHHHHHHHHHHHHHHHheeeccchhhHHHHHHHHHHhhhhhhhhhccc--c
Confidence 443 344444444432212111 111234445666777888888777766633 3333333333333333322 2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhccccCchhhhhhhHHHHHhhhhhhhHHHHHH----Hh--h----ccchhHHHHH
Q 039541 412 EVLQIGLELASFFSACVAFNVLLVFGTELFTTCVRNSTTSLVRQAVNLGAAFSPVLI----SA--G----RQNEFLSFGV 481 (521)
Q Consensus 412 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~----~~--~----~~~~~~~~~~ 481 (521)
.|+.++..+++...+....++...-+++....+.-|...|+..++.-+-..+-..++ |. . ..-+...|++
T Consensus 326 Iw~~Ya~yvlfr~~y~l~itiA~~~iA~nL~~e~~gLvFGiNTFvAl~lQsilT~iVvd~~g~~L~ir~Q~~~Y~~Yf~v 405 (433)
T KOG3810|consen 326 IWVCYAGYVLFRVIYQLTITIATFQIARNLSSELFGLVFGINTFVALILQSILTLIVVDDRGLGLDIRTQFVVYSSYFIV 405 (433)
T ss_pred eehhhhhHHHHHhhHhhhhhHHHHHHHHhhhhhhheeeeehHHHHHHHHHHhheEEEEcccccCCCcceeEEEEeehHHH
Confidence 378888888888888888887777777777777778899988876644443333332 11 0 0124556778
Q ss_pred HHHHHHHHhHhhhcc
Q 039541 482 FGLVVFCFGFFVVFL 496 (521)
Q Consensus 482 ~~~~~~~~~~~~~~~ 496 (521)
++++.++........
T Consensus 406 ~~~i~~~~~~~~~~~ 420 (433)
T KOG3810|consen 406 LGVIFLIGFGIEYLM 420 (433)
T ss_pred HHHHHHHHHHHHHHH
Confidence 888877776554333
No 218
>PRK09848 glucuronide transporter; Provisional
Probab=98.86 E-value=6.9e-08 Score=96.73 Aligned_cols=123 Identities=11% Similarity=0.024 Sum_probs=97.8
Q ss_pred eeeecceeeCCccccchhhHHHHHHHHHHhhhhhhhccccCCCCchHHHHHHHHHHHHHHHHHhccc--cHHHHHHHHHH
Q 039541 104 IISDWSLECAGSSILSGLPSSCFFIGCLLGGLALSTLGDSSSLGRKKLLFLSCFAMSITALATIFAN--NIWIYSTIRFV 181 (521)
Q Consensus 104 i~~~~~~~~~~~~~~~~~~~s~~~lg~~i~~~~~g~l~dr~~~Grr~~l~~~~~~~~~~~~~~~~~~--~~~~l~~~r~l 181 (521)
+++.+|.+.... ++......++..++.++++++.|| +|+|+++.++.++.+++.++..+.+ +++.+++..++
T Consensus 255 ~~~~~g~~~~~~----~~~~~~~~~~~~~~~~l~~~l~~r--~g~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~l 328 (448)
T PRK09848 255 VRYVLNDTGLFT----VLVLVQNLVGTVASAPLVPGMVAR--IGKKNTFLIGALLGTCGYLLFFWVSVWSLPVALVALAI 328 (448)
T ss_pred EeeecCChHHHH----HHHHHHHHHHHHHHHHHHHHHHHH--hCcHHHHHHHHHHHHHHHHHHHHcCchhHHHHHHHHHH
Confidence 344566554222 444444567788899999999999 9999999999999888888777654 67777788899
Q ss_pred hhccchhhHhhhhhheeeeecCc-------chhHHHHHHHHHHHHHHHHHHHH-HHhhc
Q 039541 182 AGFFRAPIMTSVIVLLSEMVSKR-------WRGQVVIIGFTFFSFGLVSLPAV-AYLSR 232 (521)
Q Consensus 182 ~G~~~g~~~~~~~~~i~~~~~~~-------~rg~~~~~~~~~~~~G~~i~~~i-~~~~~ 232 (521)
.|+|.+...+...++++|..|.+ ++|...++.+....+|..+++.+ +.++.
T Consensus 329 ~g~G~~~~~~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~~klg~aig~~i~g~~l~ 387 (448)
T PRK09848 329 ASIGQGVTMTVMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKCGQAIGGSIPAFILG 387 (448)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhhHHhhCccchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999988754 45999999999999999999887 55543
No 219
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=98.86 E-value=5e-09 Score=104.50 Aligned_cols=152 Identities=14% Similarity=0.197 Sum_probs=135.9
Q ss_pred CcceeeecceeeCCccccchhhHHHHHHHHHHhhhhhhhccccCCCC--chHHHHHHHHHHHHHHHHHhccccHHHHHHH
Q 039541 101 DTTIISDWSLECAGSSILSGLPSSCFFIGCLLGGLALSTLGDSSSLG--RKKLLFLSCFAMSITALATIFANNIWIYSTI 178 (521)
Q Consensus 101 ~~~i~~~~~~~~~~~~~~~~~~~s~~~lg~~i~~~~~g~l~dr~~~G--rr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~ 178 (521)
+|...++.+.+..+. +.+.++..+...++.++.|+++|+ .. ++.+..+++++.+++.+.++++++++.++..
T Consensus 321 l~~~~~~~g~~~~~a----a~l~Siigi~~i~gRi~~G~laD~--~~~~~~~~~~~~ll~~gl~~~~~p~~~~~~~l~~~ 394 (509)
T KOG2504|consen 321 LPSYAKSLGLSSNDA----AFLLSIIGVSDIIGRIILGLLADK--PGIRALVLFLLTLLIAGLARLFLPFATTYVGLIVF 394 (509)
T ss_pred HHHHHhhcCCChhhh----HHHHHHHHHhhhhhhhhhhhhcCc--cccchHHHHHHHHHHHHHHHHHHHHhccHHHHHHH
Confidence 778888999999887 999999999999999999999999 66 5666788999999999999999999999999
Q ss_pred HHHhhccchhhHhhhhhheeeeecCcchhHHHHHHHHHHHHHHHHHHHH-HHhhcCCc-hhHHHHHHHHHHHHHHhhhce
Q 039541 179 RFVAGFFRAPIMTSVIVLLSEMVSKRWRGQVVIIGFTFFSFGLVSLPAV-AYLSRGSS-WKMLYVWTSIPSIVCCIIIYP 256 (521)
Q Consensus 179 r~l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~i~~~i-~~~~~~~~-wr~~f~~~~~~~~~~~~~~~~ 256 (521)
-.+.|++.|.........+.|+.+.++-..+.|+.....+++.++||.+ |++.+..+ |...|+..++..++.. ++++
T Consensus 395 ~~~fG~~~g~~~~l~~~i~~~~~g~~~l~~a~Gl~l~~~gi~~l~gpPiag~~~d~tg~Y~~~f~~~g~~~~~s~-~~~~ 473 (509)
T KOG2504|consen 395 SILFGFCVGSFSSLTPVILVDLVGLEKLSNAYGLLLLFQGIGALVGPPIAGLLYDITGNYDHAFYFCGLCFLLSA-VLLL 473 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcChhhcchHHHHHHHHhHHHHHcCcccceeeeeccCCeeeehhhcChHHHHHH-HHHH
Confidence 9999999999888888899999999999999999999999999999888 66666555 9999999998888887 6666
Q ss_pred eee
Q 039541 257 FIS 259 (521)
Q Consensus 257 ~~~ 259 (521)
..|
T Consensus 474 ~~~ 476 (509)
T KOG2504|consen 474 ILR 476 (509)
T ss_pred HhH
Confidence 555
No 220
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=98.85 E-value=1.9e-07 Score=90.15 Aligned_cols=152 Identities=13% Similarity=-0.017 Sum_probs=114.0
Q ss_pred HHHhHHhhccCCCccHHH-HH---HHHHHHhHhHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHhcCCchHHHHHHHH
Q 039541 344 VYFGLLLGVGNLSFNIYL-SL---AFNGLLDIPAYLLTFILIERWSRKSSILTFCILSGTCSAICVAIGDEQEVLQIGLE 419 (521)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~-~~---~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 419 (521)
..+..|++.++++.+... .+ .....+-.+..+.+|+++||+|.|+++.++.+...+..++.++.... ..+.+.-
T Consensus 45 ~s~a~p~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K~vL~l~~l~Wsl~t~L~~fa~Sl--~~L~i~R 122 (511)
T TIGR00806 45 ESFITPYLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYKPVLVLQALSFVCVWLLLLLGTSV--WHMQLME 122 (511)
T ss_pred HHHHHHHHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHH
Confidence 334566777777766544 33 33445666888999999999999999999999999998888875443 6778888
Q ss_pred HHHHHHHHHHHHHHHHhhccccCchhhhhhhHHHHHhhhhhhhHHHHHHHhh-ccc---hhHHHHHHHHHHHHHhHhhhc
Q 039541 420 LASFFSACVAFNVLLVFGTELFTTCVRNSTTSLVRQAVNLGAAFSPVLISAG-RQN---EFLSFGVFGLVVFCFGFFVVF 495 (521)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~~-~~~---~~~~~~~~~~~~~~~~~~~~~ 495 (521)
++.|++.+..+ ....++...+|+++|+++.|+.+....+|.++++.+.++. ..+ +.....+......++.+..++
T Consensus 123 ~llGvaEA~~~-A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~qll~s~gWr~y~~Ln~Isl~s~~~a~~~a~~ 201 (511)
T TIGR00806 123 VFYSVTMAARI-AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQLLVTLGWISYSTLNIISLVFMTFSVFLALF 201 (511)
T ss_pred HHHHHHHHHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999 9999999999999999999999999999999998888752 112 222222333344445555677
Q ss_pred ccc
Q 039541 496 LPE 498 (521)
Q Consensus 496 ~~~ 498 (521)
+|.
T Consensus 202 LP~ 204 (511)
T TIGR00806 202 LKR 204 (511)
T ss_pred CCC
Confidence 763
No 221
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=98.84 E-value=1.2e-07 Score=92.37 Aligned_cols=150 Identities=10% Similarity=0.103 Sum_probs=118.3
Q ss_pred eecc-eeeCCccccchhhHHHHHHHHHHhhhhhhhccccCCCCchHHHHHHHHHHHHHHHHHhcc-ccHHHHH----HHH
Q 039541 106 SDWS-LECAGSSILSGLPSSCFFIGCLLGGLALSTLGDSSSLGRKKLLFLSCFAMSITALATIFA-NNIWIYS----TIR 179 (521)
Q Consensus 106 ~~~~-~~~~~~~~~~~~~~s~~~lg~~i~~~~~g~l~dr~~~Grr~~l~~~~~~~~~~~~~~~~~-~~~~~l~----~~r 179 (521)
++.| .+.+.. +.+.+...++-++.-...+++..| +|.|+++.++.+.+++=..+.+.. ++.+... +..
T Consensus 235 ~~~gg~~~~~~----g~~~~l~~~aEi~~f~~~~~~~~r--~g~~~ll~~a~~~~~vR~~l~a~~~~~~~~~~~~~~l~q 308 (400)
T PF03825_consen 235 QELGGYSGSTI----GILWALGVVAEIPFFFFSGRFLKR--FGIKWLLLLALVAYAVRWLLYAYFSDPWPFIVALQLLGQ 308 (400)
T ss_pred HHcccchhhHH----HHHHHHHHHHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHH
Confidence 4555 444333 767777777888888899999999 999999999999999998888887 5544433 345
Q ss_pred HHhhccchhhHhhhhhheeeeecCcchhHHHHHHHH-HHHHHHHHHHHH-HHhhcCCc------hhHHHHHHHHHHHHHH
Q 039541 180 FVAGFFRAPIMTSVIVLLSEMVSKRWRGQVVIIGFT-FFSFGLVSLPAV-AYLSRGSS------WKMLYVWTSIPSIVCC 251 (521)
Q Consensus 180 ~l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~-~~~~G~~i~~~i-~~~~~~~~------wr~~f~~~~~~~~~~~ 251 (521)
.++|+..|........++.+..|++.|+++.++++. ..++|..+|..+ |++.+.+| |...+.+.+.+.++..
T Consensus 309 ~lhG~tf~~~~~a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~~iG~~igG~l~~~~g~~~~~~~~~~~~v~a~~~~~~~ 388 (400)
T PF03825_consen 309 LLHGLTFGLFHAASVRYIDRIAPPELRATAQGLYSALSFGLGGAIGSLIGGWLYDAFGARGMFDWSAVFLVFAVMALVIL 388 (400)
T ss_pred hhhhHHHHHHHHHHHHHHHHhCCccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHHHHHHH
Confidence 679999999999999999999999999999999876 467999999988 67766544 5566777777777777
Q ss_pred hhhceeeecc
Q 039541 252 IIIYPFISES 261 (521)
Q Consensus 252 ~~~~~~~~es 261 (521)
++.+++.+|+
T Consensus 389 ~~f~~~fk~~ 398 (400)
T PF03825_consen 389 VLFVILFKPK 398 (400)
T ss_pred HHHHhhccCC
Confidence 6666666664
No 222
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=98.84 E-value=2.7e-06 Score=82.55 Aligned_cols=327 Identities=11% Similarity=0.023 Sum_probs=173.6
Q ss_pred hhhHHHHHHHHHHhhhhhhhccccCCCCchHHHHHHHHHHHHHHHHHhc------c--c----cHH---HHHHHHHHhhc
Q 039541 120 GLPSSCFFIGCLLGGLALSTLGDSSSLGRKKLLFLSCFAMSITALATIF------A--N----NIW---IYSTIRFVAGF 184 (521)
Q Consensus 120 ~~~~s~~~lg~~i~~~~~g~l~dr~~~Grr~~l~~~~~~~~~~~~~~~~------~--~----~~~---~l~~~r~l~G~ 184 (521)
+...-.-.+..++.++..|.+.|| ..|.++...+++..-++..+.+. . . +-+ .+++.-.+.|.
T Consensus 41 siygl~~~~~~~~f~~~vG~~iD~--~~Rl~~~~~~l~~Qn~sv~~s~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~ 118 (432)
T PF06963_consen 41 SIYGLVRSLSAILFGPWVGRWIDR--SPRLKVIRTSLVVQNLSVAASCALFLLLLSYPSSSSQSSWLFIALFALLILLGA 118 (432)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHhC--CcchhhHHHHHHHHHHHHHHHHHHHHHHHhCCccccccchHHHHHHHHHHHHHH
Confidence 333344456667788889999999 99999877765544333332211 1 1 112 22222222222
Q ss_pred cchhhHh-hhhhheeeee------cCcchhHHHHHHHHHHHHHHHHHHHH-HHhhcCCchhHHHHHHHHHHHHHHhhhce
Q 039541 185 FRAPIMT-SVIVLLSEMV------SKRWRGQVVIIGFTFFSFGLVSLPAV-AYLSRGSSWKMLYVWTSIPSIVCCIIIYP 256 (521)
Q Consensus 185 ~~g~~~~-~~~~~i~~~~------~~~~rg~~~~~~~~~~~~G~~i~~~i-~~~~~~~~wr~~f~~~~~~~~~~~~~~~~ 256 (521)
-.-.... ...+.=.||. +++.+.+.++...-.--+..+++|++ |.+....+.+....+.+...++..++=++
T Consensus 119 i~~Las~~~~iavERDWVvvi~~~~~~~La~~NA~mRRIDL~ckllaPl~vG~l~t~~s~~~~~~~i~~~N~~S~~vEy~ 198 (432)
T PF06963_consen 119 IERLASIANTIAVERDWVVVIAGGDPGALARMNATMRRIDLFCKLLAPLFVGLLMTFASPVIAAIFIAGWNLASVFVEYF 198 (432)
T ss_pred HHHHHHhhhhheeccchhhhhcCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCHHHHHHHHHHHHHHHHHHHHH
Confidence 1111111 1112222442 34555666777766777788999998 77777788888888888887777644444
Q ss_pred eeec----chhHHHhcCCHHHHHHHHHHHhhhcCCCCCCCccccccCCCCCccccC-------CCcccccccHHHHhccH
Q 039541 257 FISE----SPRWLFIHGHEAEAMAVLKRLASRSNYQSDYGLESCCLSNMPPKAKNV-------IPKLDLYSSLKDLFNRK 325 (521)
Q Consensus 257 ~~~e----sp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~l~~~~ 325 (521)
++.. .|. +..+++.++ ++...+.+ +...+.++. ..-.+....++..++.+
T Consensus 199 ~l~~VY~~~P~-L~~~~~~~~----------------~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~w~~Y~~q~ 259 (432)
T PF06963_consen 199 LLARVYNSVPA-LAVKKRSSE----------------SESSSDEE--SSSESSSDPSILKRLWNPLRTIIRGWRTYFRQP 259 (432)
T ss_pred HHHHHHHhChH-hcCCCCCcc----------------cccccccc--ccccccchhhHHHHHHHHHHHHhccHHHHHhCH
Confidence 3321 121 100100000 00000000 000000000 00011123556666776
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhHHhhccCCCccHHHHH---HHHHHHhHhHHHHHHHHHhhcCCchHHHHHHHHHHHHHH
Q 039541 326 WALRRLLTIMALAFGIGVVYFGLLLGVGNLSFNIYLSL---AFNGLLDIPAYLLTFILIERWSRKSSILTFCILSGTCSA 402 (521)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~i~~~ 402 (521)
.+...+...+++....++-. .+.-++...|.+....+ ....+.++.|+++..++.+|+|..+.-.++.....+++.
T Consensus 260 vflas~alalLY~TVLsf~~-lmt~yl~~~G~s~~~igi~R~~gav~Gl~gT~~~p~l~~riGlvr~G~~~l~~q~~~L~ 338 (432)
T PF06963_consen 260 VFLASFALALLYFTVLSFGG-LMTAYLKSQGYSPSVIGIFRGLGAVFGLLGTWVYPWLMKRIGLVRAGLWSLWWQWVCLA 338 (432)
T ss_pred HHHHHHHHHHHHHHHhcCcH-HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHH
Confidence 65544444443333222222 22333334466665544 445577888999999999999988876666654443322
Q ss_pred H---HHhcCCch--H---HHHHHHHHHHHHHHHHHHHHHHHhhccccCchhhhhhhHHHHHhhhhhhhHHHHHH
Q 039541 403 I---CVAIGDEQ--E---VLQIGLELASFFSACVAFNVLLVFGTELFTTCVRNSTTSLVRQAVNLGAAFSPVLI 468 (521)
Q Consensus 403 ~---~~~~~~~~--~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~ 468 (521)
+ ..+.+..+ . ..+....++.-+|.-+.--...-+..|..|+++||...|+-+...++.-.+.-.+.
T Consensus 339 ~~v~~~~~~~~~~~~~s~~~l~~gi~~SR~GLW~fDL~~~qi~Qe~V~~~~Rg~v~gvq~sl~~lf~ll~~~~~ 412 (432)
T PF06963_consen 339 LCVVSFWAPGSPFSSISAYLLLGGIALSRIGLWSFDLAVTQIMQENVPESERGAVSGVQNSLQSLFELLSFVLT 412 (432)
T ss_pred HHHHHHhcCCCCchhhHHHHHHHHHHHHHHHHHhhhHHHHHhhcccCCHHHhhHHHHHHHHHHHHHHHHHHHHH
Confidence 2 22333322 1 23333444444444444457778899999999999999999998877766554444
No 223
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=98.83 E-value=2.6e-08 Score=111.83 Aligned_cols=141 Identities=14% Similarity=0.143 Sum_probs=113.7
Q ss_pred eeeecceeeCCccccchhhHHHHHHHHHHhhhhhhhccccCCCCchHHHHHHHHHHHHHHHHHhcc--------------
Q 039541 104 IISDWSLECAGSSILSGLPSSCFFIGCLLGGLALSTLGDSSSLGRKKLLFLSCFAMSITALATIFA-------------- 169 (521)
Q Consensus 104 i~~~~~~~~~~~~~~~~~~~s~~~lg~~i~~~~~g~l~dr~~~Grr~~l~~~~~~~~~~~~~~~~~-------------- 169 (521)
+.+.+|.+..+. |++.+.+.+|.++++++.|+++|+ .++++.+..+.++.+++.+..++.
T Consensus 252 ~~~~~g~~~~~~----g~~~~~~~~g~~ig~~~~g~l~~~--~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 325 (1140)
T PRK06814 252 AKETLGGDENVA----TLFLAVFSVGVAVGSFLASKLSEG--RITLLYVPIGALLMGLFGLDLAFASSSVPAEPAQLKSI 325 (1140)
T ss_pred HHHHcCCchHHH----HHHHHHHHHHHHHHHHHHHHHhCC--ceeeeeehHHHHHHHHHHHHHHhcccccccccccccch
Confidence 345578887555 999999999999999999999998 888877776666666665544443
Q ss_pred ------ccHHHHHHHHHHhhccchhhHhhhhhheeeeecCcchhHHHHHHHHHHHHHHHHHHHH-HHhh-cCCchhHHHH
Q 039541 170 ------NNIWIYSTIRFVAGFFRAPIMTSVIVLLSEMVSKRWRGQVVIIGFTFFSFGLVSLPAV-AYLS-RGSSWKMLYV 241 (521)
Q Consensus 170 ------~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~i~~~i-~~~~-~~~~wr~~f~ 241 (521)
++.+.+++..++.|++.+...+...+++.+.+|+++||+++|+.++...+|..+++++ +.+. ...++...++
T Consensus 326 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~G~v~g~~~~~~~~~~~ig~~~~g~l~~~~~~~~~~~~ 405 (1140)
T PRK06814 326 LVFLSKRHGWRILIDLFGLAAAGGLYIVPLFAALQAWANPAHRARVIAANNVLNAAFMVAGTIILALLQALGFSIPWIIL 405 (1140)
T ss_pred hhhhcccccHHHHHHHHHHHHHHHHhHHHHHHHHHhhCCcccceeeeHHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHH
Confidence 6778888899999999999999999999999999999999999999999999999888 5554 3456777666
Q ss_pred HHHHHHHHH
Q 039541 242 WTSIPSIVC 250 (521)
Q Consensus 242 ~~~~~~~~~ 250 (521)
+.++..++.
T Consensus 406 ~~~~~~~~~ 414 (1140)
T PRK06814 406 FIALANLIV 414 (1140)
T ss_pred HHHHHHHHH
Confidence 655544433
No 224
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.83 E-value=2.1e-08 Score=92.61 Aligned_cols=136 Identities=14% Similarity=0.062 Sum_probs=118.2
Q ss_pred HHHHHHHHHHhHhHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 039541 360 YLSLAFNGLLDIPAYLLTFILIERWSRKSSILTFCILSGTCSAICVAIGDEQEVLQIGLELASFFSACVAFNVLLVFGTE 439 (521)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 439 (521)
........+.+++.+++.|.+.||+|+|..+++|+.++..+.+++.+.... +...+.=.+-|++.........++.++
T Consensus 109 G~LFaskA~~qllvnp~~G~l~~~iGy~ipm~~Gl~vmf~sTilFafg~sy--~~l~vAR~LQgvgsA~~~tsglamlAd 186 (464)
T KOG3764|consen 109 GLLFASKALVQLLVNPFFGNLIDRIGYKIPMVAGLFVMFLSTILFAFGNSY--PMLFVARSLQGVGSAFADTSGLAMLAD 186 (464)
T ss_pred hHHHHHHHHHHHHhcccchhhHHHhccccHHHHHHHHHHHHHHHHHHcchh--HHHHHHHHHhhhhHHHHHhhhHHHHHH
Confidence 344455668889999999999999999999999999999999999987666 577778888999999999999999999
Q ss_pred ccCchh-hhhhhHHHHHhhhhhhhHHHHHHHh--hccchhHHHHHHHHHHHHHhHhhhccc
Q 039541 440 LFTTCV-RNSTTSLVRQAVNLGAAFSPVLISA--GRQNEFLSFGVFGLVVFCFGFFVVFLP 497 (521)
Q Consensus 440 ~~~~~~-r~~~~~~~~~~~~~g~~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 497 (521)
.+|++. |+.++|+.-.+..+|-.++|.++|. ...+...+|+++++++++...+-+++-
T Consensus 187 ~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~~Gk~aPFlVL~~v~Lld~~L~l~vi 247 (464)
T KOG3764|consen 187 VFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEFAGKSAPFLVLAIVLLLDGALQLLVI 247 (464)
T ss_pred HcccchhhhHHHHHHHHHHhccceecCCcccchHhhcCCcCcHHHHHHHHHHHHHHHHhee
Confidence 999876 6999999999999999999999986 446789999999999998887765553
No 225
>PRK10133 L-fucose transporter; Provisional
Probab=98.83 E-value=2.9e-07 Score=91.57 Aligned_cols=128 Identities=13% Similarity=-0.077 Sum_probs=98.0
Q ss_pred HHHHHhHHhhccCCCccHHHHH---HHHHHHhHhHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHhc-CCchHHHHHH
Q 039541 342 GVVYFGLLLGVGNLSFNIYLSL---AFNGLLDIPAYLLTFILIERWSRKSSILTFCILSGTCSAICVAI-GDEQEVLQIG 417 (521)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~~ 417 (521)
.......|.+.++++.+..... ....++..++.++.|++.||+|||+++..+..+..++.+++... ...+.+...+
T Consensus 43 ~~~~~~~p~i~~~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~G~r~~l~~g~~~~~~~~~l~~~~~~a~~~~~ll~ 122 (438)
T PRK10133 43 NLNDILLPQFQQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGLFLYALGAALFWPAAEIMNYTLFLV 122 (438)
T ss_pred HHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHH
Confidence 3444556776666776654433 44567778899999999999999999999999999988765321 1222256777
Q ss_pred HHHHHHHHHHHHHHHHHHhhccccCchhhhhhhHHHHHhhhhhhhHHHHHHH
Q 039541 418 LELASFFSACVAFNVLLVFGTELFTTCVRNSTTSLVRQAVNLGAAFSPVLIS 469 (521)
Q Consensus 418 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~ 469 (521)
..++.|++.+...+....++.|..|++.|+..+++......+|..++|.+.+
T Consensus 123 ~r~l~G~g~g~~~~~~~~~v~~~~~~~~~~~~~s~~~~~~~~G~~~g~~~g~ 174 (438)
T PRK10133 123 GLFIIAAGLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQ 174 (438)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8888999999998988888888877777767888999999999999988764
No 226
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=98.82 E-value=3.6e-08 Score=100.82 Aligned_cols=137 Identities=15% Similarity=0.058 Sum_probs=115.8
Q ss_pred HHHHHHHHHhHhHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHHHHHhhccc
Q 039541 361 LSLAFNGLLDIPAYLLTFILIERWSRKSSILTFCILSGTCSAICVAIGDEQEVLQIGLELASFFSACVAFNVLLVFGTEL 440 (521)
Q Consensus 361 ~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 440 (521)
....+..++.++|.++.|.++||+|||+++.++.++..++.+..++.++. +...+.-++.|++.++...+.+.+..|.
T Consensus 122 ~~~s~~~~G~~vG~~i~g~lsD~~GRk~~~~~~~~~~~i~~~~~a~a~~~--~~~~~~Rfl~G~~~~~~~~~~~~~~~E~ 199 (521)
T KOG0255|consen 122 LGQSLFFLGVLVGSLIFGPLSDRFGRKPVLLVSLLLFIIFGILTAFAPNY--WMFLIFRFLSGFFGSGPLTVGFGLVAEI 199 (521)
T ss_pred HHHHHHHHHHHHHHhhheehHhhcccHHHHHHHHHHHHHHHHHHHHhCcH--HHHHHHHHHHHhhccchhHHhHhhheee
Confidence 34455667888999999999999999999999999999999888887776 6888999999999999999999999999
Q ss_pred cCchhhhhhhHHHHHhhhhhhhHHHHHHHhhccchhHHHHHHHHHHHHHhHhhhccccCC
Q 039541 441 FTTCVRNSTTSLVRQAVNLGAAFSPVLISAGRQNEFLSFGVFGLVVFCFGFFVVFLPETI 500 (521)
Q Consensus 441 ~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 500 (521)
++++.|+.+..+ ......++.++|.+.++...++.+.+++..+..++..+.++..+|.+
T Consensus 200 ~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~~Wr~~~~~~~~~~~~~~~~~~l~~Es~ 258 (521)
T KOG0255|consen 200 VSPKQRGLALTL-GGFFFVGGLMLPAGAAYITRDWRWLFWIISIPSGLFLLLWFLPPESP 258 (521)
T ss_pred cCcchhhHHHHH-HHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHccCcCh
Confidence 999999999999 77888888888888887655777777777777776666655555644
No 227
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=98.80 E-value=5.4e-07 Score=89.00 Aligned_cols=162 Identities=12% Similarity=0.008 Sum_probs=106.0
Q ss_pred HHHHHHHHhHHhhccCCCccHHHHH---HHHHHHhHhHHHHHHHHHh----hcCCchHHHHH-HHHHHHHHHHHHhcCCc
Q 039541 339 FGIGVVYFGLLLGVGNLSFNIYLSL---AFNGLLDIPAYLLTFILIE----RWSRKSSILTF-CILSGTCSAICVAIGDE 410 (521)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~g~l~d----r~g~~~~~~~~-~~~~~i~~~~~~~~~~~ 410 (521)
++........+.+++..+.+..... .+..+..++..++.|+++| |+|||+.++.+ .....++++++.+....
T Consensus 18 ~~~~l~~~~l~~yl~~lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il~g~~~~~~~l~ll~~~~~~ 97 (477)
T TIGR01301 18 FGWALQLSLLTPYVQELGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAAGAALVAFAVILIGFAADI 97 (477)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHHHHHHHHHHHHHHHHHHhCchh
Confidence 3333333344555667776654444 3445677788889999999 59999988775 55555555555554321
Q ss_pred h------------H---HHHHHHHHHHHHHHHHHHHHHHHhhccccCchhh--hhhhHHHHHhhhhhhhHHHHHHHhhc-
Q 039541 411 Q------------E---VLQIGLELASFFSACVAFNVLLVFGTELFTTCVR--NSTTSLVRQAVNLGAAFSPVLISAGR- 472 (521)
Q Consensus 411 ~------------~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r--~~~~~~~~~~~~~g~~~~p~~~~~~~- 472 (521)
. . +...+...+..++.....+...+++.|..|+++| +.+.++.+....+|+.+++.+.++..
T Consensus 98 ~~~~~~~~~~~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~~~~a~~~~~~~~~lG~ilg~~~g~~~~~ 177 (477)
T TIGR01301 98 GHLFGDNLDKKTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARRTRIANAYFSFFMAIGNVLGYAAGAYSGL 177 (477)
T ss_pred hhhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhH
Confidence 0 0 1233344455567777778889999999998865 57899999999999999998876421
Q ss_pred ----------------cchhHHHHHHHHHHHHHhHh-hhccccCC
Q 039541 473 ----------------QNEFLSFGVFGLVVFCFGFF-VVFLPETI 500 (521)
Q Consensus 473 ----------------~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 500 (521)
.+....|.+.+++.+++.+. .+..+|..
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~E~~ 222 (477)
T TIGR01301 178 YKIFPFTKTEACGVSCANLKSCFLIDIILLAILTYIALSAVKENP 222 (477)
T ss_pred HHhcccccccccccccchHHHHHHHHHHHHHHHHHHHeeeeeccC
Confidence 13455677666666665554 45566653
No 228
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=98.79 E-value=3.4e-07 Score=79.92 Aligned_cols=340 Identities=13% Similarity=0.059 Sum_probs=178.8
Q ss_pred cceeeecceeeCCccccchhhHHHHHHHHHHhhhhhhhccccCCCCchHHHHHHHHHHHHHHHHHhccccHHHHHHHHHH
Q 039541 102 TTIISDWSLECAGSSILSGLPSSCFFIGCLLGGLALSTLGDSSSLGRKKLLFLSCFAMSITALATIFANNIWIYSTIRFV 181 (521)
Q Consensus 102 ~~i~~~~~~~~~~~~~~~~~~~s~~~lg~~i~~~~~g~l~dr~~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l 181 (521)
-.+-++++....|. |.+.-+..-...+...+.|-++|+ -|||+.-+.-.+.+.+++ +.-.++.|-.++++|.+
T Consensus 61 YyLYstYgFgkG~I----gqLfiaGfgSsmLFGtivgSLaDk--qGRKracvtycitYiLsC-iTKhSpqYkVLmVGR~L 133 (454)
T KOG4332|consen 61 YYLYSTYGFGKGDI----GQLFIAGFGSSMLFGTIVGSLADK--QGRKRACVTYCITYILSC-ITKHSPQYKVLMVGRVL 133 (454)
T ss_pred eeeehhcCccCCcc----ceeeecccchHHHHHHHHHHHHhh--hccccceeeehHHHHHHH-HhhcCCceEEEeehhhh
Confidence 44567788888777 666666666666777788889999 999998776666665554 35577899999999999
Q ss_pred hhccchhhHhhhhhh-eeeeecCcchhHHHHHHHH--------HHHHHHHHHHHHH-Hhhc--CCchhHHHHHHHHHHHH
Q 039541 182 AGFFRAPIMTSVIVL-LSEMVSKRWRGQVVIIGFT--------FFSFGLVSLPAVA-YLSR--GSSWKMLYVWTSIPSIV 249 (521)
Q Consensus 182 ~G~~~g~~~~~~~~~-i~~~~~~~~rg~~~~~~~~--------~~~~G~~i~~~i~-~~~~--~~~wr~~f~~~~~~~~~ 249 (521)
-|+..+..+.+.-++ +.|.-+ +|+.---+... +..+-.+++.+.| .+.+ ..|--.+|-..+.+..+
T Consensus 134 GGiaTsLLFSaFEsWliaEHne--kr~FeqqWls~TFskA~ffgNglvAiiaGlfgn~lvd~~slGPVAPFdAAacfLai 211 (454)
T KOG4332|consen 134 GGIATSLLFSAFESWLIAEHNE--KRGFEQQWLSVTFSKAVFFGNGLVAIIAGLFGNLLVDTFSLGPVAPFDAAACFLAI 211 (454)
T ss_pred hhHHHHHHHHHHHHHHHHHhhh--ccCChHhhhhHHHHHHHHhhccHHHHHHHHHHHHHHHHhccCCCCchHHHHHHHHH
Confidence 999999988888774 566542 33322222211 1122222233332 2222 23444556544443333
Q ss_pred HHhhhceeeecchhHHHhcCCHHHHHHHHHHHhhhcCCCCCCCccccccCCCCCccccCCCcccccccHHHHhccHHHHH
Q 039541 250 CCIIIYPFISESPRWLFIHGHEAEAMAVLKRLASRSNYQSDYGLESCCLSNMPPKAKNVIPKLDLYSSLKDLFNRKWALR 329 (521)
Q Consensus 250 ~~~~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 329 (521)
...+..--..| .-+++.+.++.+.+.. ...+.+..+++
T Consensus 212 gmAvil~~W~E------Nygdps~~kdlltqf~---------------------------------gaa~aiaSD~k--- 249 (454)
T KOG4332|consen 212 GMAVILSSWSE------NYGDPSENKDLLTQFK---------------------------------GAARAIASDEK--- 249 (454)
T ss_pred HHHHHHhhhhh------ccCChhhhHHHHHHhh---------------------------------HhHHHHhcchH---
Confidence 33122211112 1233333333333321 13344455543
Q ss_pred HHHHHHHHHHHHHHHHHhHHhhccCCC-----ccHHHHHHHHHHHhHhHHHHHHHHHhhcCCc--hHHHHHHHHHHHHHH
Q 039541 330 RLLTIMALAFGIGVVYFGLLLGVGNLS-----FNIYLSLAFNGLLDIPAYLLTFILIERWSRK--SSILTFCILSGTCSA 402 (521)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~--~~~~~~~~~~~i~~~ 402 (521)
..+.+.+....-...|...-+|.+.+. ...........+..++|+-+..++..|-..| ..+.+.+.+....+.
T Consensus 250 i~LLG~iqsLFE~smytFVFLWTPaLspn~e~iPhGfiFatFMlASmLGSSla~Rl~s~s~~~ve~ymqivf~vs~a~l~ 329 (454)
T KOG4332|consen 250 IALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIPHGFIFATFMLASMLGSSLASRLLSRSSPKVESYMQIVFLVSIAALL 329 (454)
T ss_pred HHHHHHHHHHHhhhhheeeeeecccCCCCcccCCchhHHHHHHHHHHHhhHHHHHHHhcCCcccchHHHHHHHHHHHHHH
Confidence 223333333333333322222332222 1222333333355566666665555543322 344444444444433
Q ss_pred HHHhc----CCch-HHHHHHHHHHHHHHHHHHHHHHHHhhccccCchhhhhhhHHHHHhhhhhhhHHHHHHHhhc--cch
Q 039541 403 ICVAI----GDEQ-EVLQIGLELASFFSACVAFNVLLVFGTELFTTCVRNSTTSLVRQAVNLGAAFSPVLISAGR--QNE 475 (521)
Q Consensus 403 ~~~~~----~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~~~--~~~ 475 (521)
+.... +... +....+..+++-.+.+..+|...-+-.+..|++.|++.+-+...-.++-..++-+..-... .+.
T Consensus 330 Lpilt~~vsP~kes~~~s~i~F~~~E~cvGlfwPSimkmRsqyIPEearstimNfFRvPLnifvClvLynlh~~~~p~~t 409 (454)
T KOG4332|consen 330 LPILTSSVSPSKESPSESLIGFCLFEACVGLFWPSIMKMRSQYIPEEARSTIMNFFRVPLNIFVCLVLYNLHVDAFPTTT 409 (454)
T ss_pred HHHHHhccCCCcCCchHHHHHHHHHHHHHhhcchHHHHHHHhhCCHHHHhhhhhheechhhHhhhhhheecccccCcccc
Confidence 33222 1111 1345667777788889999999999999999999887765544333332222222211111 223
Q ss_pred hHHHHHHHHHHHHHhHh
Q 039541 476 FLSFGVFGLVVFCFGFF 492 (521)
Q Consensus 476 ~~~~~~~~~~~~~~~~~ 492 (521)
...|.++.+...++.+.
T Consensus 410 r~mf~icS~~~~~a~i~ 426 (454)
T KOG4332|consen 410 RNMFGICSAFLFVASIL 426 (454)
T ss_pred chhhhhhHHHHHHHHHH
Confidence 35666666666665544
No 229
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=98.79 E-value=4.8e-08 Score=101.11 Aligned_cols=152 Identities=13% Similarity=0.068 Sum_probs=112.3
Q ss_pred HHhhccCCCccHHH---HHHHHHHHhHhHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHhcC----------------
Q 039541 348 LLLGVGNLSFNIYL---SLAFNGLLDIPAYLLTFILIERWSRKSSILTFCILSGTCSAICVAIG---------------- 408 (521)
Q Consensus 348 ~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~i~~~~~~~~~---------------- 408 (521)
++.+.++++.+... ......++..++.++.+++.||.+||+.+.++.++.+++.+++.+..
T Consensus 56 l~~iek~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~~i~~g~ll~~lg~ll~alphf~~~~y~~~~~~~~~~ 135 (633)
T TIGR00805 56 LTTIERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKLHRPIVIGIGCAIMGLGSFLLSLPHFLSGRYSYSTTVSSTG 135 (633)
T ss_pred chhhhhhhCCCCCcceeeeehhhHHHHHHHHHHHHhhcccCcceEEEecHHHHHHHHHHHhChHHhcCCccccccccccc
Confidence 34444555544333 33445577788889999999999999999999999999988876542
Q ss_pred ------------C--------------------c-hHHHHHHHHHHHHHHHHHHHHHHHHhhccccCchhhhhhhHHHHH
Q 039541 409 ------------D--------------------E-QEVLQIGLELASFFSACVAFNVLLVFGTELFTTCVRNSTTSLVRQ 455 (521)
Q Consensus 409 ------------~--------------------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 455 (521)
. . ....+++.-++.|++.+..++...+++.|.+|++.|+...|+.+.
T Consensus 136 ~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~~i~d~~~~~~~~~~~~i~~~ 215 (633)
T TIGR00805 136 NLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGISYIDDFAKSKNSPLYIGILES 215 (633)
T ss_pred cccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCchhhhccCCccccHHHHHHHHH
Confidence 0 0 113455678888888888899999999999999999999999999
Q ss_pred hhhhhhhHHHHHHHhhc-----c-------------------chhHHHHHHHHHHHHHhHhhhccccC
Q 039541 456 AVNLGAAFSPVLISAGR-----Q-------------------NEFLSFGVFGLVVFCFGFFVVFLPET 499 (521)
Q Consensus 456 ~~~~g~~~~p~~~~~~~-----~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~ 499 (521)
...+|..+++.+.++.. . .++..|++.+++.++..+.++++|++
T Consensus 216 ~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaWwl~Fli~g~l~~l~~v~l~~~p~~ 283 (633)
T TIGR00805 216 IAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAWWIGFLICGGVALLTSIPFFFFPKA 283 (633)
T ss_pred HHHhhhHHHHHHHHHHHhcccccccCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHhCccc
Confidence 99999999998876421 0 13445777777666665555566654
No 230
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=98.77 E-value=1.1e-07 Score=89.13 Aligned_cols=146 Identities=14% Similarity=0.126 Sum_probs=113.1
Q ss_pred ceeeecceeeCCccccchhhHHHHHHHHHHhhhhhhhccccCCCCchHHHHHHHHHHHHHHHHHhccc-------cHHHH
Q 039541 103 TIISDWSLECAGSSILSGLPSSCFFIGCLLGGLALSTLGDSSSLGRKKLLFLSCFAMSITALATIFAN-------NIWIY 175 (521)
Q Consensus 103 ~i~~~~~~~~~~~~~~~~~~~s~~~lg~~i~~~~~g~l~dr~~~Grr~~l~~~~~~~~~~~~~~~~~~-------~~~~l 175 (521)
.++++|+++..+. |...+.+.+...+..+..|+++|| +|.+|++.......+++..+.++.. +....
T Consensus 244 ~~~~~fg~~~~~A----g~~a~~f~~~g~l~Rp~GG~LsDR--~Gg~rv~~~~f~~~~~~~~~l~~~~~~~~~~~~~~~~ 317 (417)
T COG2223 244 YLVTQFGLSPVTA----GLIAFLFPLIGALARPLGGWLSDR--IGGRRVTLAVFVGMALAAALLSLFLTGFGHGGSFVVF 317 (417)
T ss_pred HHHHhcCCChhhH----HHHHHHHHHHHHHHHhccchhhhh--ccchhHHHHHHHHHHHHHHHHHccccccccCcchHHH
Confidence 4568899999777 999999999999999999999999 9999999999998888888877763 44444
Q ss_pred HHHHHHhhccchhhHhhhhhheeeeecCcchhHHHHHHHHHHHHHHHHHHHH-HHhhcCCc-hhHHHHHHHHHHHHHHhh
Q 039541 176 STIRFVAGFFRAPIMTSVIVLLSEMVSKRWRGQVVIIGFTFFSFGLVSLPAV-AYLSRGSS-WKMLYVWTSIPSIVCCII 253 (521)
Q Consensus 176 ~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~i~~~i-~~~~~~~~-wr~~f~~~~~~~~~~~~~ 253 (521)
++.-+..++..|.-....+.++..++| ++-|.+.|+..+..++|...-|.. +...+..| ++..|++.....+++.++
T Consensus 318 ~~~~l~l~~~~G~GnGsvfk~Ip~if~-~~~G~v~G~vga~G~lGGf~lp~~~g~~~~~tg~~~~~f~~~~~~~~~a~v~ 396 (417)
T COG2223 318 VAVFLALFVFAGLGNGSVFKMIPVIFP-KETGAVTGIVGAIGGLGGFFLPLAFGVSLDLTGSYTGAFMLLLAFYLVALVL 396 (417)
T ss_pred HHHHHHHHHHhccCcchheeechHHHH-hhhhHHHHHHHHhccccccchhHHHHHHHHhcccHHHHHHHHHHHHHHHHHH
Confidence 443344444444444455666777776 488999999999999998777766 77666555 999999988888888744
Q ss_pred hc
Q 039541 254 IY 255 (521)
Q Consensus 254 ~~ 255 (521)
.+
T Consensus 397 ~~ 398 (417)
T COG2223 397 TW 398 (417)
T ss_pred HH
Confidence 44
No 231
>PRK10429 melibiose:sodium symporter; Provisional
Probab=98.76 E-value=6.4e-07 Score=90.28 Aligned_cols=111 Identities=11% Similarity=0.011 Sum_probs=90.1
Q ss_pred hhhHHHHHHHHHHhhhhhhhccccCCCCchHHHHHHHHHHHHHHHHHhc-----cccHHHHHHHHHHhhccchhhHhhhh
Q 039541 120 GLPSSCFFIGCLLGGLALSTLGDSSSLGRKKLLFLSCFAMSITALATIF-----ANNIWIYSTIRFVAGFFRAPIMTSVI 194 (521)
Q Consensus 120 ~~~~s~~~lg~~i~~~~~g~l~dr~~~Grr~~l~~~~~~~~~~~~~~~~-----~~~~~~l~~~r~l~G~~~g~~~~~~~ 194 (521)
+++.+...++..++.+++++++|| +|+|+.+.++.++.+++.+...+ .++.+.+++.-++.|++.+...+...
T Consensus 269 ~~~~~~~~i~~ii~~~~~~~l~~r--~gkk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~~~~~~~~~~~ 346 (473)
T PRK10429 269 PYYLSYAGAANLVTLILFPRLVKS--LSRRILWAGASIFPVLSCGVLLLMGLAAPHNALLIVIAGILLNIGTALFWVLQV 346 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH--cCcHHHHHHHHHHHHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 677777778899999999999999 99999999888877766655432 35677777888899999999999999
Q ss_pred hheeeeec-------CcchhHHHHHHHHHHHHHHHHHHHH-HHhhc
Q 039541 195 VLLSEMVS-------KRWRGQVVIIGFTFFSFGLVSLPAV-AYLSR 232 (521)
Q Consensus 195 ~~i~~~~~-------~~~rg~~~~~~~~~~~~G~~i~~~i-~~~~~ 232 (521)
++++|..+ +++.|..++......-+|..+++.+ |.+++
T Consensus 347 am~ad~id~~e~~tG~R~~G~~~s~~~~~~K~~~al~~~i~g~~l~ 392 (473)
T PRK10429 347 IMVADTVDYGEYKLGIRCESIAYSVQTMVVKGGSAFAAFFIGVVLG 392 (473)
T ss_pred HHHhhhhhhhhHhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999966 3344668899999999999998877 66554
No 232
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=98.75 E-value=2.8e-08 Score=96.30 Aligned_cols=127 Identities=10% Similarity=0.075 Sum_probs=98.8
Q ss_pred cceeeecceeeCCccccchhhHHHHHHHHHHhhhhhhhccccCCC-CchHHHHHHHHHHHHHHHHHhccccHHHHHHHHH
Q 039541 102 TTIISDWSLECAGSSILSGLPSSCFFIGCLLGGLALSTLGDSSSL-GRKKLLFLSCFAMSITALATIFANNIWIYSTIRF 180 (521)
Q Consensus 102 ~~i~~~~~~~~~~~~~~~~~~~s~~~lg~~i~~~~~g~l~dr~~~-Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~ 180 (521)
|.+.++.|.+..+. +.+.+...++..++.++.|++.|| + +||+.+..+.++.+++.++..+.++..... .-+
T Consensus 221 p~~~~~~g~~~~~~----g~~~~~~~~~~i~~~~~~g~l~dr--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 293 (355)
T TIGR00896 221 PAILISHGASAATA----GSLLALMQLAQAASALLIPALARR--VKDQRGIVAVLAVLQLVGLCGLLFAPMHGLWA-WAL 293 (355)
T ss_pred HHHHHHcCCCHHHH----HHHHHHHHHHHHHHHHhHHHHHhh--hccchHHHHHHHHHHHHHHHHHHHhhhhHHHH-HHH
Confidence 44445678887665 999999999999999999999999 9 567777788888888877777765543332 457
Q ss_pred HhhccchhhHhhhhhheeeee-cCcchhHHHHHHHHHHHHHHHHHHHH-HHhhcCCc
Q 039541 181 VAGFFRAPIMTSVIVLLSEMV-SKRWRGQVVIIGFTFFSFGLVSLPAV-AYLSRGSS 235 (521)
Q Consensus 181 l~G~~~g~~~~~~~~~i~~~~-~~~~rg~~~~~~~~~~~~G~~i~~~i-~~~~~~~~ 235 (521)
+.|++.|...+...+.+.+.. ++++++...++.+....+|..++|.+ |.+.++.|
T Consensus 294 l~g~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~gp~~~G~l~~~~g 350 (355)
T TIGR00896 294 VLGLGQGGAFPLALTLIGLRSRQAAQAAALSAMAQSIGYLLAALGPLFVGVLHDISG 350 (355)
T ss_pred HHHHhhhhHhHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 789999998888777766555 45677999999888888888899887 77766543
No 233
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=98.73 E-value=4.8e-08 Score=85.87 Aligned_cols=141 Identities=11% Similarity=0.129 Sum_probs=106.7
Q ss_pred ceeeecceeeCCccccchhhHHHHHHHHHHhhhhhhhccccCCCCchHHHHHHHHHHHH-HHHHHhccccHHHHHHHHHH
Q 039541 103 TIISDWSLECAGSSILSGLPSSCFFIGCLLGGLALSTLGDSSSLGRKKLLFLSCFAMSI-TALATIFANNIWIYSTIRFV 181 (521)
Q Consensus 103 ~i~~~~~~~~~~~~~~~~~~~s~~~lg~~i~~~~~g~l~dr~~~Grr~~l~~~~~~~~~-~~~~~~~~~~~~~l~~~r~l 181 (521)
..++.||+|..++ +.+.+..+.-.++.+++.|.++|| +|++-..+.+..+..+ +-....| +++.=..+..+
T Consensus 290 fF~~rfGlS~~~a----~~i~s~vy~Isav~spvfg~i~Dk--~G~n~~wv~~a~~~tl~~H~~l~F--t~lsPy~~m~~ 361 (459)
T KOG4686|consen 290 FFQKRFGLSAVSA----GNILSTVYGISAVLSPVFGAISDK--YGFNLWWVASACILTLLGHSGLFF--TFLSPYTSMTF 361 (459)
T ss_pred HHHHhhCCChhhc----cchhhhhhhhhhhhhhhHHHhHhh--hcceehhHHHHHHHHHHHhhhHHh--hhccHHHHHHH
Confidence 5678999999887 999999999999999999999999 9999888775554443 3333333 33344567788
Q ss_pred hhccchhhHhhhhhheeeeecCcchhHHHHHHHHHHHHHHHHHHHH-HHhhcCC---chhHHHH-HHHHHHHHHH
Q 039541 182 AGFFRAPIMTSVIVLLSEMVSKRWRGQVVIIGFTFFSFGLVSLPAV-AYLSRGS---SWKMLYV-WTSIPSIVCC 251 (521)
Q Consensus 182 ~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~i~~~i-~~~~~~~---~wr~~f~-~~~~~~~~~~ 251 (521)
.|+..+.........++...|+++.|++.|..+...++|..+.|++ |.+.++. .|--.|. +.+.+++...
T Consensus 362 lGLsysllAcslWP~va~~vpE~qLGTaygf~qsIqNLgla~i~Iiag~i~d~~g~y~~le~ffl~~~~~aL~sv 436 (459)
T KOG4686|consen 362 LGLSYSLLACSLWPCVASLVPEEQLGTAYGFIQSIQNLGLAFIPIIAGFIADGDGSYDNLEAFFLIIGLMALTSV 436 (459)
T ss_pred HhhhHHHHHHHHhhhhhhhCCHHHhcchHHHHHHHHhhhhhHHhhhhheeecCCCchhhHHHHHHHHHHHHHHHH
Confidence 8988887777778888889999999999999999999999999999 5565533 3444444 3444444444
No 234
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=98.73 E-value=5.4e-07 Score=90.47 Aligned_cols=142 Identities=12% Similarity=-0.026 Sum_probs=102.8
Q ss_pred HHhhccCCCccH--HHHHHHHHHHhHhHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHH
Q 039541 348 LLLGVGNLSFNI--YLSLAFNGLLDIPAYLLTFILIERWSRKSSILTFCILSGTCSAICVAIGDEQEVLQIGLELASFFS 425 (521)
Q Consensus 348 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 425 (521)
+++...+.|.+. .+......+...++.++.|.++|.+|||..++.+.++..++.++.....+. ..++....+.|++
T Consensus 67 l~~I~~diG~~~~~~w~~~~~~l~~av~~~~~G~LSDlfGRr~~~i~g~~l~vvG~Iv~atA~~~--~~~iag~~l~Gvg 144 (599)
T PF06609_consen 67 LPYINADIGGSDNWSWFSTAWTLASAVSFPFVGRLSDLFGRRYFFIIGSLLGVVGSIVCATAQNM--NTFIAGMVLYGVG 144 (599)
T ss_pred HHHHHHhcCCCccchHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHhHHHHhhcCCcH--HHHHHHHHHHHHh
Confidence 355556666432 333445557777888999999999999999999999999999988877666 4567788888888
Q ss_pred HHHHHHHHHHhhccccCchhhhhhhHHHHHhhhhhhhHHHHHHHh--hccchhHHHHHHHHHHHHHhHh
Q 039541 426 ACVAFNVLLVFGTELFTTCVRNSTTSLVRQAVNLGAAFSPVLISA--GRQNEFLSFGVFGLVVFCFGFF 492 (521)
Q Consensus 426 ~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 492 (521)
.+... .....++|..|.+.|..+.++...........+|.+... ...++.+.|.+.++...++.+.
T Consensus 145 aG~~~-~~~~~isEl~p~k~R~~~~~~~~~~~i~~~~~~~~ia~~~~~~~~WRw~~~~~~i~~~i~~vl 212 (599)
T PF06609_consen 145 AGVQE-LAALAISELVPNKWRGLGLAIASIPFIITTWISPLIAQLFAAHSGWRWIFYIFIIWSGIALVL 212 (599)
T ss_pred hHHHH-HHHHHHHHhcccchhhhHhHHHHHHHHhhhcccHHHHHHhccCCCcchHHHHHHHHHHHHHHH
Confidence 65554 455668999999999988877765554555566776643 2346777777777766665544
No 235
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=98.72 E-value=1.2e-07 Score=89.86 Aligned_cols=129 Identities=26% Similarity=0.386 Sum_probs=108.4
Q ss_pred hhhHHHHHHHHHHhhhhhhhccccCCCCchHHHHHHHHHHHHHHHHHhcccc--HHHHHHHHHHhhccchhhHhhhhhhe
Q 039541 120 GLPSSCFFIGCLLGGLALSTLGDSSSLGRKKLLFLSCFAMSITALATIFANN--IWIYSTIRFVAGFFRAPIMTSVIVLL 197 (521)
Q Consensus 120 ~~~~s~~~lg~~i~~~~~g~l~dr~~~Grr~~l~~~~~~~~~~~~~~~~~~~--~~~l~~~r~l~G~~~g~~~~~~~~~i 197 (521)
++..+.+.++..+++++.|.++|| +|||+.+..+.....++.++.++..+ .+.+++.|+++|++.+...+...+++
T Consensus 42 ~~~~~~~~~~~~~~~~~~g~l~d~--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 119 (338)
T COG0477 42 GLLLSAFFLGYAIGSLLAGPLGDR--YGRRKVLIIGLLLFLLGTLLLALAPNVGLALLLILRLLQGLGGGGLLPVASALL 119 (338)
T ss_pred HHHHHHHHHHHHHHhhhhhhcccc--ccchHHHHHHHHHHHHHHHHHHhCccchHHHHHHHHHHHHhhhHHHHHHHHHHH
Confidence 999999999999999999999999 99999988888776777777777776 99999999999999999999999999
Q ss_pred eeeecC-cchhHHHHHHHH-HHHHHHHHHHHHHHhh---cCCchhHHHHHHHHHHHHH
Q 039541 198 SEMVSK-RWRGQVVIIGFT-FFSFGLVSLPAVAYLS---RGSSWKMLYVWTSIPSIVC 250 (521)
Q Consensus 198 ~~~~~~-~~rg~~~~~~~~-~~~~G~~i~~~i~~~~---~~~~wr~~f~~~~~~~~~~ 250 (521)
.|+.|+ ++|+...+.... ...+|.++++.++... ...+||..|.+........
T Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (338)
T COG0477 120 SEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLGALLWGWRAAFLLAALLGLLL 177 (338)
T ss_pred HHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHH
Confidence 999997 688999998888 5778888888664332 2358999777666555443
No 236
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=98.67 E-value=1.2e-07 Score=91.02 Aligned_cols=144 Identities=12% Similarity=0.036 Sum_probs=109.4
Q ss_pred CCccHHHHHHHHH---HHhHhHHHHHHHHHhh-cCCchHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHH
Q 039541 355 LSFNIYLSLAFNG---LLDIPAYLLTFILIER-WSRKSSILTFCILSGTCSAICVAIGDEQEVLQIGLELASFFSACVAF 430 (521)
Q Consensus 355 ~~~~~~~~~~~~~---~~~~~~~~~~g~l~dr-~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 430 (521)
+|.+...+..+.+ ..--+..+++||++|| +|+|+.+..+.++..++.+++..........+++.+.+..++.|+.=
T Consensus 56 Lg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~~tI~lGail~~iGh~~L~~~~~~~~~gl~i~L~~I~iG~Gl~K 135 (498)
T COG3104 56 LGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGTRRTIVLGAILMAIGHLVLAISSVSGPGGLYIGLALIIVGTGLFK 135 (498)
T ss_pred CCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHhccccccccHHHHHHHHHHhcccccc
Confidence 4455444433332 2223577899999999 59999999999999999999887641222466777777778888888
Q ss_pred HHHHHhhccccCchh--hhhhhHHHHHhhhhhhhHHHHHHHh--hccchhHHHHHHHHHHHHHhHhhhcccc
Q 039541 431 NVLLVFGTELFTTCV--RNSTTSLVRQAVNLGAAFSPVLISA--GRQNEFLSFGVFGLVVFCFGFFVVFLPE 498 (521)
Q Consensus 431 ~~~~~~~~~~~~~~~--r~~~~~~~~~~~~~g~~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 498 (521)
+....+..|.+|++. |-.+.++.++..++|++++|++.++ ...++...|...++...++.+.+...++
T Consensus 136 ~NiS~llg~ly~~~DprrD~gFt~fY~~iNiGsl~~p~i~~~~~~~~g~~~gF~~aavGm~~gl~~f~~~~r 207 (498)
T COG3104 136 PNISSLLGELYPKDDPRRDGGFTLFYMGINIGSLIAPIITGLLAINYGWHVGFGLAAVGMIIGLVIFLLGRR 207 (498)
T ss_pred ccHHHHHHHhcCCCCcccCCCccEEEEEeehHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHccc
Confidence 899999999997653 6677778888889999999999987 3456788888888888888777766653
No 237
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=98.67 E-value=6.7e-07 Score=84.51 Aligned_cols=125 Identities=14% Similarity=0.136 Sum_probs=95.0
Q ss_pred CcceeeecceeeCCccccchhhHHHHHHHHHHhhhhhhhcccc--CCCCchHHHHH-HHHHHHHHHHHHhccccHH----
Q 039541 101 DTTIISDWSLECAGSSILSGLPSSCFFIGCLLGGLALSTLGDS--SSLGRKKLLFL-SCFAMSITALATIFANNIW---- 173 (521)
Q Consensus 101 ~~~i~~~~~~~~~~~~~~~~~~~s~~~lg~~i~~~~~g~l~dr--~~~Grr~~l~~-~~~~~~~~~~~~~~~~~~~---- 173 (521)
.+++..++|++..- .+.+--...+...+.+|+.|..+|| .||||||.++. +.+...++.++..++.++.
T Consensus 55 ~tPyl~~lGvphk~----~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI~~~s~~i~~~l~Lig~aaDig~~lg 130 (498)
T KOG0637|consen 55 LTPYLQSLGVPHKW----SSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFILAGSLLIAVSLFLIGYAADIGLLLG 130 (498)
T ss_pred ccHHHHHcCCCccc----ccccccccccccceecccccccccccccccccccchHHHhhHHHHHHHhhhhhHhhhhHHhc
Confidence 46677788888733 3777777888888999999999998 27999877654 6666777777888775432
Q ss_pred -------------HHHHHHHHhhccchhhHhhhhhheeeeecCcchhH-HHHHHHHHHHHHHHHHHHHHH
Q 039541 174 -------------IYSTIRFVAGFFRAPIMTSVIVLLSEMVSKRWRGQ-VVIIGFTFFSFGLVSLPAVAY 229 (521)
Q Consensus 174 -------------~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~rg~-~~~~~~~~~~~G~~i~~~i~~ 229 (521)
.++++--+.=++........-+++.|...++++.+ +++++....++|..+|..+|.
T Consensus 131 d~~~~~~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~~~~Ans~f~~f~avGnvLGY~~g~ 200 (498)
T KOG0637|consen 131 DNERKPVKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDAKKTRANSVFSFFMAVGNVLGYALGS 200 (498)
T ss_pred CCcccccchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChhhhhccchhHHHHHHhcceeeeeccc
Confidence 34444445555666777888899999997766666 999999999999999888864
No 238
>PRK09669 putative symporter YagG; Provisional
Probab=98.67 E-value=6.6e-07 Score=89.53 Aligned_cols=114 Identities=19% Similarity=0.245 Sum_probs=89.3
Q ss_pred hhhHHHHHHHHHHhhhhhhhccccCCCCchHHHHHHHHHHHHHHHHHhc--cccHHHHHHHHHHhhccchhhHhhhhhhe
Q 039541 120 GLPSSCFFIGCLLGGLALSTLGDSSSLGRKKLLFLSCFAMSITALATIF--ANNIWIYSTIRFVAGFFRAPIMTSVIVLL 197 (521)
Q Consensus 120 ~~~~s~~~lg~~i~~~~~g~l~dr~~~Grr~~l~~~~~~~~~~~~~~~~--~~~~~~l~~~r~l~G~~~g~~~~~~~~~i 197 (521)
+.+.....++..++.+++++++|| +|+|+.+..+.++.+++.+...+ .++.+.+++..++.|++.+...+...+++
T Consensus 267 ~~~~~~~~i~~ii~~~~~~~l~~r--~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~am~ 344 (444)
T PRK09669 267 TLFLVTGMIAGLFGALLSERLLGK--FDRVRAFKWTIVAFVILSALIFFIPPSNVWLIFALNILFNFIQNLTTPLQWSMF 344 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH--hChHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 556666778888999999999999 99999999888766654443322 35777888888999999999999999999
Q ss_pred eeeecC-------cchhHHHHHHHHHHHHHHHHHHHH-HHhhcCCc
Q 039541 198 SEMVSK-------RWRGQVVIIGFTFFSFGLVSLPAV-AYLSRGSS 235 (521)
Q Consensus 198 ~~~~~~-------~~rg~~~~~~~~~~~~G~~i~~~i-~~~~~~~~ 235 (521)
+|..+. ++.|...+.......+|..+|+.+ |.+++..|
T Consensus 345 ad~~d~~e~~~G~r~~g~~~s~~~~~~klg~alg~~i~g~ll~~~G 390 (444)
T PRK09669 345 SDVVDYEEKRSGRRLDGLVFSTNLFAIKLGLAIGGAVVGWILAWVD 390 (444)
T ss_pred HhhhhhhhhhcCcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 998852 334677888888889999999887 55554333
No 239
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=98.66 E-value=1.8e-06 Score=88.82 Aligned_cols=146 Identities=13% Similarity=0.103 Sum_probs=115.7
Q ss_pred eeeecceeeCCccccchhhHHHHHHHHHHhhhhhhhccccCCCCchHHHHHHHHHHHHHHHHHhcccc--------HHHH
Q 039541 104 IISDWSLECAGSSILSGLPSSCFFIGCLLGGLALSTLGDSSSLGRKKLLFLSCFAMSITALATIFANN--------IWIY 175 (521)
Q Consensus 104 i~~~~~~~~~~~~~~~~~~~s~~~lg~~i~~~~~g~l~dr~~~Grr~~l~~~~~~~~~~~~~~~~~~~--------~~~l 175 (521)
+.+.+|.+.++. ..+...+....-+..++.|.++|+ ++||++.++++.++..+|.++.+++.. ....
T Consensus 14 l~~~lg~~~~~A----~~i~~~f~~l~yl~pilGg~iAD~-~lG~~~tIl~~~ii~~lG~~llai~a~~~~~~~~~~~~~ 88 (654)
T TIGR00926 14 FLNFLGFSESTS----TVLFHTFTYLCYLTPLIGAIIADG-WLGKFKTILYLSIVYVVGHALLSFGAIPSSGHPLHDLLD 88 (654)
T ss_pred HHHHcCCcHHHH----HHHHHHHHHHHHHHHHHHHHHHHH-HhhhHHHHHHHHHHHHHHHHHHHhccCcccccchHHHHH
Confidence 345677777555 667777777777888899999998 789999999999999999988876521 2346
Q ss_pred HHHHHHhhccchhhHhhhhhheeeeecCc---chhHHHHHHHHHHHHHHHHHHHH-HHhhc-------CCchhHHHHHHH
Q 039541 176 STIRFVAGFFRAPIMTSVIVLLSEMVSKR---WRGQVVIIGFTFFSFGLVSLPAV-AYLSR-------GSSWKMLYVWTS 244 (521)
Q Consensus 176 ~~~r~l~G~~~g~~~~~~~~~i~~~~~~~---~rg~~~~~~~~~~~~G~~i~~~i-~~~~~-------~~~wr~~f~~~~ 244 (521)
+++-.+.++|.|+.-+...+...|-++++ +|-..+.++..+.++|.++++.+ .++-. ..+|...|.+.+
T Consensus 89 l~gLaLia~G~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~fg~~~~~~~aF~i~~ 168 (654)
T TIGR00926 89 LLGLALIALGTGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILRGDVGCFGCQDCYPLAFGVPA 168 (654)
T ss_pred HHHHHHHHhhccccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHHH
Confidence 67888899999999999999999988754 36778888889999999988777 55542 236999999998
Q ss_pred HHHHHHHhhh
Q 039541 245 IPSIVCCIII 254 (521)
Q Consensus 245 ~~~~~~~~~~ 254 (521)
+..++.+++.
T Consensus 169 i~m~ia~lvf 178 (654)
T TIGR00926 169 ILMILALIVF 178 (654)
T ss_pred HHHHHHHHHH
Confidence 8888777443
No 240
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.66 E-value=3.6e-07 Score=90.23 Aligned_cols=134 Identities=11% Similarity=0.042 Sum_probs=115.1
Q ss_pred HHHHHHHhHhHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHHHHHhhccccC
Q 039541 363 LAFNGLLDIPAYLLTFILIERWSRKSSILTFCILSGTCSAICVAIGDEQEVLQIGLELASFFSACVAFNVLLVFGTELFT 442 (521)
Q Consensus 363 ~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 442 (521)
......+.+++.+.++++.||+|.|+++..+.++.+++.++..+....+.+.+++.-++.|++.+..+|....+..+-.|
T Consensus 79 ~ss~~~G~i~~~iP~g~l~~k~G~r~v~~~~~~~sa~~t~l~P~aa~~~~~~~~~~R~lqGl~~g~~~pa~~~i~~~W~P 158 (466)
T KOG2532|consen 79 FSSFFWGYILGQIPGGYLADKFGARRVFFISGLISALLTLLTPLAASIGFYLLLVLRFLQGLGQGVLFPAIGSILAKWAP 158 (466)
T ss_pred HHHHHHHHHHHHcCcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHhHHHHhHHHhhhhceeeeECC
Confidence 34455788889999999999999999999999999999988888766655566788899999999999999999999999
Q ss_pred chhhhhhhHHHHHhhhhhhhHHHHHHHh--h-ccchhHHHHHHHHHHHHHhHhhhcc
Q 039541 443 TCVRNSTTSLVRQAVNLGAAFSPVLISA--G-RQNEFLSFGVFGLVVFCFGFFVVFL 496 (521)
Q Consensus 443 ~~~r~~~~~~~~~~~~~g~~~~p~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~ 496 (521)
+++|++..++......+|.+++-.+.|+ . ..|+...|.+.+++.++-.++++++
T Consensus 159 ~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s~~GW~sifY~~g~~g~i~~~~w~~~ 215 (466)
T KOG2532|consen 159 PNERSTFIAILTAGSQLGTIITMPVSGLLCESSLGWPSIFYVFGIVGLIWFILWFLF 215 (466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccCCCCchHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999988777775 2 3678899999999888877776554
No 241
>PF13347 MFS_2: MFS/sugar transport protein
Probab=98.65 E-value=2.1e-07 Score=92.67 Aligned_cols=111 Identities=17% Similarity=0.311 Sum_probs=99.7
Q ss_pred hhhHHHHHHHHHHhhhhhhhccccCCCCchHHHHHHHHHHHHHHHHHhccc--cHHHHHHHHHHhhccchhhHhhhhhhe
Q 039541 120 GLPSSCFFIGCLLGGLALSTLGDSSSLGRKKLLFLSCFAMSITALATIFAN--NIWIYSTIRFVAGFFRAPIMTSVIVLL 197 (521)
Q Consensus 120 ~~~~s~~~lg~~i~~~~~g~l~dr~~~Grr~~l~~~~~~~~~~~~~~~~~~--~~~~l~~~r~l~G~~~g~~~~~~~~~i 197 (521)
+.+..+..++..++.+++++++|| +|+|+.+..+.++.+++.++..+.+ |.+.+++.-++.|++.+...+...+++
T Consensus 263 ~~~~~~~~~~~~v~~~~~~~l~~r--~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~gi~~~~~~~~~~a~~ 340 (428)
T PF13347_consen 263 SIFMLIFFVASIVGSPLWGRLSKR--FGKKKVYIIGLLLAALGFLLLFFLGPGSPWLVLILFILAGIGYGAFFVIPWAML 340 (428)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH--ccceeehhhhHHHHHHHHHHHHHHHhhhHHHHHHHHHHhHhhhccccccccccc
Confidence 788889999999999999999999 9999999999999999999988886 999999999999999999999999999
Q ss_pred eeeecC-------cchhHHHHHHHHHHHHHHHHHHHH-HHhhc
Q 039541 198 SEMVSK-------RWRGQVVIIGFTFFSFGLVSLPAV-AYLSR 232 (521)
Q Consensus 198 ~~~~~~-------~~rg~~~~~~~~~~~~G~~i~~~i-~~~~~ 232 (521)
+|..+. ++.|...+..+....+|..+++.+ +.++.
T Consensus 341 ad~id~~e~~tg~r~~g~~~s~~~~~~k~~~~la~~i~g~~l~ 383 (428)
T PF13347_consen 341 ADVIDYDEWKTGRRREGMYFSVNSFFIKIGQGLAGAIVGLLLA 383 (428)
T ss_pred ccchhhHHHhcCCCchHHHHHhhhhhhHHHHHHHHHHHHHHHH
Confidence 999873 345889999999999999888876 55543
No 242
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=98.61 E-value=2.4e-07 Score=87.36 Aligned_cols=155 Identities=15% Similarity=0.145 Sum_probs=114.7
Q ss_pred CcceeeecceeeCCcccc-----chhhHHHHHH-HHHHhhhhhhhccccCCCCchHHHHHHHHHHHHHHHHHhcccc---
Q 039541 101 DTTIISDWSLECAGSSIL-----SGLPSSCFFI-GCLLGGLALSTLGDSSSLGRKKLLFLSCFAMSITALATIFANN--- 171 (521)
Q Consensus 101 ~~~i~~~~~~~~~~~~~~-----~~~~~s~~~l-g~~i~~~~~g~l~dr~~~Grr~~l~~~~~~~~~~~~~~~~~~~--- 171 (521)
...|.+..++.+++. .. ++....+... +...|-.+...+.|+ .|||++.+.+.+++++..+..+...|
T Consensus 327 ~s~I~~~ig~~~~~~-~~~~~~~vA~~~~iia~~~~vPGyw~tv~~id~--iGRk~iq~~GF~~~~i~~~~~~~~y~~~~ 403 (538)
T KOG0252|consen 327 QSVIFSAIGVIPSAN-TYHELFKVAEGNLIIAVCSTVPGYWFTVYFIDI--IGRKYIQLMGFFIMTIFFFVIAGPYNQLE 403 (538)
T ss_pred HHHHHHhhccCCCcc-hHHHHHHHHHHHHHHHHHccCCceeEEEEEeeh--hhhHHHHHhhHHHHHHHHHHHcCCccccc
Confidence 455666666666554 22 1222222222 233367788889999 99999999999999999999998877
Q ss_pred -----HHHHHHHHHHhhccchhhHhhhhhheeeeecCcchhHHHHHHHHHHHHHHHHHHHH-HHhhc-----CCchhHHH
Q 039541 172 -----IWIYSTIRFVAGFFRAPIMTSVIVLLSEMVSKRWRGQVVIIGFTFFSFGLVSLPAV-AYLSR-----GSSWKMLY 240 (521)
Q Consensus 172 -----~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~i~~~i-~~~~~-----~~~wr~~f 240 (521)
.....+..++.-+|-+ .....+-+|.+|.+-|+..-|+..+..-+|.++|... .++.+ ..+-|..+
T Consensus 404 ~~~Gf~v~y~l~~ff~NFGPn---~ttfivpaE~FParvR~t~hGIsAA~GK~GAivg~~~F~~~t~~~yp~~~g~~~v~ 480 (538)
T KOG0252|consen 404 NTIGFVVLYSLTFFFGNFGPN---ATTFIVPAEIFPARVRSTCHGISAASGKAGAIVGAFGFLYLTDHNYPPNIGVRNVF 480 (538)
T ss_pred ccCceeehHHHHHHHHhcCCC---ceeEEeehhhchHHHhhhhhhHHHHhccchHHHHHHHhhHhhhccCCccccchHHH
Confidence 1233344455555533 3445566799999999999999999999999998776 77777 67899999
Q ss_pred HHHHHHHHHHHhhhceeeecch
Q 039541 241 VWTSIPSIVCCIIIYPFISESP 262 (521)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~esp 262 (521)
++.+...++.. +..+++|||.
T Consensus 481 ~i~~~~~~~gi-~~T~l~pEtk 501 (538)
T KOG0252|consen 481 IILAGCMLLGI-LFTLLIPETK 501 (538)
T ss_pred HHHHHHHHHhH-heeEEeeccc
Confidence 99999999888 7778889984
No 243
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=98.61 E-value=5.2e-07 Score=91.88 Aligned_cols=137 Identities=19% Similarity=0.140 Sum_probs=112.5
Q ss_pred HHHHHHHHHHhHhHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 039541 360 YLSLAFNGLLDIPAYLLTFILIERWSRKSSILTFCILSGTCSAICVAIGDEQEVLQIGLELASFFSACVAFNVLLVFGTE 439 (521)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 439 (521)
........++..++.++.|+++|++|||+.+.++.++..++.++..+..+. ..+.+.-++.|++.++...+...+.+|
T Consensus 92 s~~~s~~~lga~~g~l~~g~l~d~~GRk~~l~~~~~~~~iG~ii~~~a~~~--~~l~~GR~l~G~g~G~~~~~~piy~sE 169 (513)
T KOG0254|consen 92 GLLTSILNLGALVGSLLAGRLGDRIGRKKTLLLAVVLFLIGAIIIALAPSW--YQLIVGRILTGLGVGGASVLAPVYISE 169 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhhhH--HHHHHHHHHhccchhhhhhcchhhHhh
Confidence 355566778889999999999999999999999999999999999988755 678889999999999999999999999
Q ss_pred ccCchhhhhhhHHHHHhhhhhhhHHHHHHHhhc----cchhHHHHHHHHHHHHHhHhhhccccC
Q 039541 440 LFTTCVRNSTTSLVRQAVNLGAAFSPVLISAGR----QNEFLSFGVFGLVVFCFGFFVVFLPET 499 (521)
Q Consensus 440 ~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~ 499 (521)
..|++.||...+.......+|..++ ++.+... .++...+.+..+.+++..+..+++||+
T Consensus 170 iap~~~RG~l~~~~~l~~~~Gi~~~-~~~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~~~~~pes 232 (513)
T KOG0254|consen 170 IAPAHIRGTLVSLYQLFITIGILLG-YCINYGTSKVYAGWRIPLGLALIPAVILALGMLFLPES 232 (513)
T ss_pred cCChhhhHHHHHHHHHHHHHHHHHH-HHHhhhhccCCccHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 9999999999999998888887777 4444322 246666666666666655556667754
No 244
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=98.53 E-value=4.3e-05 Score=75.17 Aligned_cols=107 Identities=15% Similarity=0.057 Sum_probs=68.0
Q ss_pred HHHHHHHHHhHhHHHHHHHHHhhcCCc-hHHHHHHHHHHHHHHHHHhcCC----------chHHHHHHHHHHHHHHHHHH
Q 039541 361 LSLAFNGLLDIPAYLLTFILIERWSRK-SSILTFCILSGTCSAICVAIGD----------EQEVLQIGLELASFFSACVA 429 (521)
Q Consensus 361 ~~~~~~~~~~~~~~~~~g~l~dr~g~~-~~~~~~~~~~~i~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~ 429 (521)
....+..++.++|+.+..+..- -++| +.+.+..+.=.+...++.+... .+.+..++.++++|+..|-.
T Consensus 311 i~~~~fNvgD~vGR~~~~~~~~-p~~~~~~l~i~s~~R~iFIPlf~lcn~~~~~~~p~~~~~d~~~~~~~~l~gltnGy~ 389 (437)
T TIGR00939 311 ICFLLFNLFDWLGRSLTSKFMW-PDEDSRWLPILSFLRVLFIPLFLLCNYPQRSRLPVFFPGDAYFIILMLLFGFSNGYL 389 (437)
T ss_pred HHHHHHHHHHHHHhhhhheeEe-eCCCccchHHHHHHHHHHHHHHHHhcCCccccCCeeecccHHHHHHHHHHHHhhhHH
Confidence 3445566778888876544311 1222 1333333333333322222111 11267778889999999988
Q ss_pred HHHHHHhhccccCchhhhhhhHHHHHhhhhhhhHHHHHH
Q 039541 430 FNVLLVFGTELFTTCVRNSTTSLVRQAVNLGAAFSPVLI 468 (521)
Q Consensus 430 ~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~ 468 (521)
.+....+..+..++++|..+..++..+..+|-.+|..+.
T Consensus 390 ~s~~m~~~p~~v~~~e~e~aG~~~~~~l~~Gl~~Gs~l~ 428 (437)
T TIGR00939 390 GSLSMCLAPRQVDPHEREVAGALMVIFLLVGLALGAVLS 428 (437)
T ss_pred HHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 899999999999999998888888888777777776653
No 245
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=98.52 E-value=9.4e-06 Score=78.78 Aligned_cols=112 Identities=18% Similarity=0.185 Sum_probs=94.4
Q ss_pred chhhHHHHHHHHHHhhhhhhhccccCCCCchHHHHHHHHHHHHHHHHHhccc--cHHHHHHHHHHhhccchhhHhhhhhh
Q 039541 119 SGLPSSCFFIGCLLGGLALSTLGDSSSLGRKKLLFLSCFAMSITALATIFAN--NIWIYSTIRFVAGFFRAPIMTSVIVL 196 (521)
Q Consensus 119 ~~~~~s~~~lg~~i~~~~~g~l~dr~~~Grr~~l~~~~~~~~~~~~~~~~~~--~~~~l~~~r~l~G~~~g~~~~~~~~~ 196 (521)
..+.......+.+++.+++.++++| +|+|+++.++.++.+++.++.-+.+ +.+.+++..++.++|.+...+...++
T Consensus 274 ~~~~~~~~~~~~l~~~~~~p~L~~~--~gkk~~~~~~~~~~~i~~~~~~f~~~~~~~l~~~~~~i~~~g~~~~~~l~wam 351 (467)
T COG2211 274 AYLLLLASGAGLLIGLILWPRLVKK--FGKKKLFLIGLLLLAVGYLLLYFTPAGSVVLIVVALIIAGVGTGIANPLPWAM 351 (467)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHH--hchHHHHHHHHHHHHHHHHHHHhhcCcchHHHHHHHHHHHHHhhccccccHHH
Confidence 3677777777888889999999999 9999999999999999999988875 78899999999999999999999999
Q ss_pred eeeeecC-------cchhHHHHHHHHHHHHHHHHHHHH-HHhhc
Q 039541 197 LSEMVSK-------RWRGQVVIIGFTFFSFGLVSLPAV-AYLSR 232 (521)
Q Consensus 197 i~~~~~~-------~~rg~~~~~~~~~~~~G~~i~~~i-~~~~~ 232 (521)
++|..+- +.-|...+......-+|.+++..+ |+.+.
T Consensus 352 ~~d~vDyge~~TG~R~eGi~~s~~tF~~K~g~ala~~~~g~~L~ 395 (467)
T COG2211 352 VADTVDYGEWKTGVRREGIVYSGMTFFRKLGLALAGFIPGWILG 395 (467)
T ss_pred hcchhhHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9887643 333777888888888888887755 66554
No 246
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=98.42 E-value=1.9e-05 Score=74.51 Aligned_cols=145 Identities=12% Similarity=0.120 Sum_probs=118.5
Q ss_pred cceeeecceeeCCccccchhhHHHHHHHHHHhhhhhhhccccCCCCchHHHHHHHHHHHHHHHHHhc---cccHHHHHHH
Q 039541 102 TTIISDWSLECAGSSILSGLPSSCFFIGCLLGGLALSTLGDSSSLGRKKLLFLSCFAMSITALATIF---ANNIWIYSTI 178 (521)
Q Consensus 102 ~~i~~~~~~~~~~~~~~~~~~~s~~~lg~~i~~~~~g~l~dr~~~Grr~~l~~~~~~~~~~~~~~~~---~~~~~~l~~~ 178 (521)
|.=.+.||++.+|. .-+.+.+..|..+|....|++..| +.++|+.-.+++....++..+..+ ..+.+.+..+
T Consensus 233 Pygg~Vfgmsv~eT----T~Lta~~~~G~L~G~~~~g~~l~~-~~~~~~~a~~G~~~~~~~f~lii~a~~~~~~~~~~~~ 307 (403)
T PF03209_consen 233 PYGGEVFGMSVGET----TRLTAFWGGGTLLGMLLAGFLLSR-RLGKKRTAALGCLLGALAFALIILAGPLGSPWLFRPG 307 (403)
T ss_pred CchhHHcCCCHHHH----HHHHHHHHHHHHHHHHHHHHHhcC-CCCchHHHHHHHHHHHHHHHHHHHHHhcccchHHHHH
Confidence 44467799999887 889999999999999999998884 388888888888888877776544 4688999999
Q ss_pred HHHhhccchhhHhhhhhheeeeecCcchhHHHHHHHHHHHHHHHHHHHHHHhh-----------cCCchhHHHHHHHHHH
Q 039541 179 RFVAGFFRAPIMTSVIVLLSEMVSKRWRGQVVIIGFTFFSFGLVSLPAVAYLS-----------RGSSWKMLYVWTSIPS 247 (521)
Q Consensus 179 r~l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~i~~~i~~~~-----------~~~~wr~~f~~~~~~~ 247 (521)
-++.|++.|.......+.+.|...+++.|..+|.++....++..++.++|... ...++-.+|.+-++..
T Consensus 308 ~~l~G~g~G~f~vgals~mM~lt~~~~aG~~mG~WGaaQA~A~Glg~~~GG~~~D~~~~~~~~~~~~aY~~VF~lEa~ll 387 (403)
T PF03209_consen 308 VFLLGLGNGLFTVGALSLMMDLTSAGRAGLFMGAWGAAQAIARGLGTFLGGALRDLVRALFGNSPALAYGVVFALEAVLL 387 (403)
T ss_pred HHHHHHhhhHHHHHHHHHHHhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcchHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999998888777777663221 1235677787777776
Q ss_pred HHHH
Q 039541 248 IVCC 251 (521)
Q Consensus 248 ~~~~ 251 (521)
++.+
T Consensus 388 ~~a~ 391 (403)
T PF03209_consen 388 LAAL 391 (403)
T ss_pred HHHH
Confidence 6666
No 247
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.41 E-value=9.3e-06 Score=80.58 Aligned_cols=140 Identities=14% Similarity=0.112 Sum_probs=109.8
Q ss_pred HHHHHHHHHHhHhHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 039541 360 YLSLAFNGLLDIPAYLLTFILIERWSRKSSILTFCILSGTCSAICVAIGDEQEVLQIGLELASFFSACVAFNVLLVFGTE 439 (521)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 439 (521)
.....+..++-+++.+.++.+.||++-.+.+....++.++..++-....+. +.+++.-++.|++.+..+|....++..
T Consensus 84 ~~~~t~F~v~Yii~~~p~~~L~~r~~ls~~l~~~~~~w~~~~~~~~~~~s~--~~~ialr~llGl~es~~wP~~~~~lg~ 161 (495)
T KOG2533|consen 84 GVLDTVFYVGYIIGQFPSGLLGDRFPLSKGLSVSGILWGLFGFLTAAVHSF--PGLIALRFLLGLFESGGWPGVVAILGN 161 (495)
T ss_pred hhHHHHHHHHHHHHHhhHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHhhh--HHHHHHHHHHHHHhcccchHHHHHHHh
Confidence 344456667888899999999999996666655555555544444333333 678888999999999999999999999
Q ss_pred ccCchhhhhhhHHHHHhhhhhhhHHHHHHHh--------hccchhHHHHHHHHHHHHHhHh-hhccccCCC
Q 039541 440 LFTTCVRNSTTSLVRQAVNLGAAFSPVLISA--------GRQNEFLSFGVFGLVVFCFGFF-VVFLPETIG 501 (521)
Q Consensus 440 ~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~--------~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 501 (521)
-+.+++|+..+|+.+....+|+++|+++... ...++.+.|++-|++.+...++ ++++|+...
T Consensus 162 wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~~gW~~~FiI~G~i~~~~gi~~f~~lp~~P~ 232 (495)
T KOG2533|consen 162 WYGKSERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGLAGWRWLFIIEGVITLVLGIVVFFFLPDNPS 232 (495)
T ss_pred hcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCCcCCceeehhHHHHHHHHHHheEEEEecCChh
Confidence 9999999999999999999999999988753 3457889999999988877655 566675443
No 248
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=98.40 E-value=2.5e-06 Score=78.49 Aligned_cols=151 Identities=15% Similarity=0.125 Sum_probs=119.4
Q ss_pred CcceeeecceeeCCccccchhhHHHHHHHHHHhhhhhhhccccCCCCchHHHHHHHHHHHHHHHHHhccccHHHHHHHHH
Q 039541 101 DTTIISDWSLECAGSSILSGLPSSCFFIGCLLGGLALSTLGDSSSLGRKKLLFLSCFAMSITALATIFANNIWIYSTIRF 180 (521)
Q Consensus 101 ~~~i~~~~~~~~~~~~~~~~~~~s~~~lg~~i~~~~~g~l~dr~~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~ 180 (521)
+|.|..|-|+|..+. |++.+...+.....++....+++| +-++|+..+...+++.++.+.+.+.+.-..++- -+
T Consensus 231 LP~ili~~G~sa~~a----G~llsl~~l~~~~~~ll~P~la~R-~~n~r~~~~~~~~~~l~G~~G~~~~P~~~~~lw-~~ 304 (395)
T COG2807 231 LPAILIDRGLSAAEA----GSLLSLMQLAQLPTALLIPLLARR-SKNQRPLVVLALLLMLVGLVGLLLAPGQLPILW-AL 304 (395)
T ss_pred HHHHHHHcCCCHHHh----hhHHHHHHHHHHHHHHHHHHHHHH-hcccchHHHHHHHHHHHHHHHHHHhhhhHHHHH-HH
Confidence 688899999999888 999999999999999999999996 367888888899999999998888865444443 49
Q ss_pred HhhccchhhHhhhhhheeeeecC-cchhHHHHHHHHHHHHHHHHHHHH-HHhhc-CCchhHHHHHHHHHHHHHHhhhcee
Q 039541 181 VAGFFRAPIMTSVIVLLSEMVSK-RWRGQVVIIGFTFFSFGLVSLPAV-AYLSR-GSSWKMLYVWTSIPSIVCCIIIYPF 257 (521)
Q Consensus 181 l~G~~~g~~~~~~~~~i~~~~~~-~~rg~~~~~~~~~~~~G~~i~~~i-~~~~~-~~~wr~~f~~~~~~~~~~~~~~~~~ 257 (521)
+.|+|.|..++.....+.+..+. ++-++..++.+....+=..+||.+ |++-+ ..+|+...+..+...++..+..+..
T Consensus 305 llG~G~G~~F~laL~li~~rs~~a~~Aa~LSgmaQg~GYllAa~GP~l~G~lhDa~gsw~~~~~~l~~~~i~m~i~Gl~a 384 (395)
T COG2807 305 LLGLGQGGAFPLALTLILLRSSDAAIAAALSGMAQGVGYLLAAFGPWLFGFLHDATGSWSAPLVLLALATLLMLIFGLRA 384 (395)
T ss_pred HHhCccchHHHHHHHHHHhhcCChHHHHHHHHHhhhhhHHHHhhhhhhHhHHHHhcCChHHHHHHHHHHHHHHHHHHhhc
Confidence 99999999999999999888754 444555666655555555567877 77665 3589999988888877777555443
No 249
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=98.39 E-value=8.2e-05 Score=71.70 Aligned_cols=265 Identities=14% Similarity=0.071 Sum_probs=128.5
Q ss_pred hhhhhheeeeecCcchhHHHHHHHHHHHHHHHHHHHHHHhhc--------------CCc---hhHHHHHHHHHHHHHHhh
Q 039541 191 TSVIVLLSEMVSKRWRGQVVIIGFTFFSFGLVSLPAVAYLSR--------------GSS---WKMLYVWTSIPSIVCCII 253 (521)
Q Consensus 191 ~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~i~~~i~~~~~--------------~~~---wr~~f~~~~~~~~~~~~~ 253 (521)
.+.-.+.-.+..+++++.|..-...+.+.|..++..+=..++ ..| -..-..+.+...++..+.
T Consensus 137 IAVDGWALT~Ls~~n~~~ASTcqtvG~~~Gyfls~tvFlalns~~f~Nky~r~~p~~~glvtl~~yl~fwg~~~l~~T~~ 216 (544)
T PF13000_consen 137 IAVDGWALTMLSPENVGYASTCQTVGQTAGYFLSFTVFLALNSPDFCNKYLRSTPSDEGLVTLSGYLKFWGWVFLIVTIL 216 (544)
T ss_pred ceeehhhhhhcChhhcchHHHHHHhHhhhhHHHHHHHHHhhCCHHHHHHhcccCCCCCCeeeHHHHHHHHHHHHHHHHHH
Confidence 334445555667888999888888888888887665422211 111 112223445555555545
Q ss_pred hceeeecchhHHHhcCCHHHHHHHHHHHhhhcCCCCCCCccccccCCCCC-ccccCCCcccccccHHHHhccHHHHHHHH
Q 039541 254 IYPFISESPRWLFIHGHEAEAMAVLKRLASRSNYQSDYGLESCCLSNMPP-KAKNVIPKLDLYSSLKDLFNRKWALRRLL 332 (521)
Q Consensus 254 ~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 332 (521)
..++-+|.|.... ..+.+..+ . .++. ......+.++.+. ..++...-.+....+.+++|.|..+...+
T Consensus 217 v~~~k~E~~~~~~-~~~~~~~~-------~-~~~~--~~~~~~~~~~~~~~~~~~~~~i~~~Y~~l~~ilkLp~V~~li~ 285 (544)
T PF13000_consen 217 VAFFKKEKPHSES-LPKIEPIN-------K-SDGK--SKEISIEYDESDVISTEEILSIKDVYKSLWKILKLPNVQTLII 285 (544)
T ss_pred HheEeeccccccc-Cccccccc-------c-cccc--ccccceecccccccchhhhhhHHHHHHHHHHHHcCchHHHHHH
Confidence 6666677653110 00000000 0 0000 0000000000000 00000111122335566778887666555
Q ss_pred HHHHHHHHHHHHHHhHHhhccCCCccHHHHHHHHHHHhHhHHHHHHHHHhhcC--Cc-----------------------
Q 039541 333 TIMALAFGIGVVYFGLLLGVGNLSFNIYLSLAFNGLLDIPAYLLTFILIERWS--RK----------------------- 387 (521)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g--~~----------------------- 387 (521)
+....-++....--...+-+-+.|.+-..... ..+..++..++.++++-|+. ++
T Consensus 286 ilL~~KigF~a~da~T~LKLlEkG~~KE~LAl-~~li~~P~qii~~~~~~Kws~g~~P~~~~~~~l~~~~~~~~~~~~l~ 364 (544)
T PF13000_consen 286 ILLTAKIGFQANDAVTSLKLLEKGLSKEDLAL-LVLIDFPFQIILPYYIGKWSAGSPPLDVDNKALPNFSRANKIIRLLV 364 (544)
T ss_pred HHHHHHhccccchhhhHHHHHHcCCCHHHhHH-HHHHhhhHHHHHHHHhhhhhcCCCccccccccccccccccchhhhhh
Confidence 55555444433333333334445554333322 23566777777777777762 22
Q ss_pred ------hHHHHHHHHHHHH----HHHHHhcCCchH------HHHHHHHHHHHHHHHHHHHHHHHhhccccCchhhhhhhH
Q 039541 388 ------SSILTFCILSGTC----SAICVAIGDEQE------VLQIGLELASFFSACVAFNVLLVFGTELFTTCVRNSTTS 451 (521)
Q Consensus 388 ------~~~~~~~~~~~i~----~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 451 (521)
+....++..-.+. ..+....+..+. ...++.-++..+.....+....++-+.+..|..-|+.+.
T Consensus 365 g~~g~L~~Wl~af~gRL~~a~l~~~iV~~fP~~g~v~~~Yf~lvI~~~~l~sf~stvmFVai~AFharISDP~IGGTYMT 444 (544)
T PF13000_consen 365 GDAGALRPWLWAFWGRLVAALLAQLIVYFFPSDGPVPTYYFLLVIIQHVLSSFMSTVMFVAIMAFHARISDPAIGGTYMT 444 (544)
T ss_pred ccchhhHHHHHHHHHHHHHHHHHHheEEeCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCcccchHHHH
Confidence 1112222211111 111122231111 222333444445555666778888889999999999999
Q ss_pred HHHHhhhhhhhHHHHH
Q 039541 452 LVRQAVNLGAAFSPVL 467 (521)
Q Consensus 452 ~~~~~~~~g~~~~p~~ 467 (521)
+.|++.++|+--...+
T Consensus 445 LLNTvSNLGGtWP~~~ 460 (544)
T PF13000_consen 445 LLNTVSNLGGTWPRTF 460 (544)
T ss_pred HHHHHHhcCCCchHHH
Confidence 9999999997654433
No 250
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=98.39 E-value=8.6e-07 Score=88.85 Aligned_cols=121 Identities=12% Similarity=0.092 Sum_probs=104.2
Q ss_pred eecceeeCCccccchhhHHHHHHHHHHhhhhhhhccccCCCCchHHHHHHHHHHHHHHHHHhcc----------ccHHHH
Q 039541 106 SDWSLECAGSSILSGLPSSCFFIGCLLGGLALSTLGDSSSLGRKKLLFLSCFAMSITALATIFA----------NNIWIY 175 (521)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~s~~~lg~~i~~~~~g~l~dr~~~Grr~~l~~~~~~~~~~~~~~~~~----------~~~~~l 175 (521)
+.+|.++.+. |++.+...++..++....+++.+| ++.|+++.++.++.+++.+..... ++.+.+
T Consensus 281 ~~lG~s~~~~----G~~~~~~~v~~i~g~~~~~~~~~~--~~~r~~l~~~~~l~~~~~~~~~~l~~~~~~~~gi~~~~~~ 354 (468)
T TIGR00788 281 QCLPGGPSFS----GMSKVVGNLGSLCGVGGYDRFLKT--FPYRLLFGVTTLLYTLSSLFDLILVKRWNLAFGISDEVFV 354 (468)
T ss_pred ccCCCCcchh----hhHHHHHHHHHHHHHHHHHHHHhh--CCHHHHHHHHHHHHHHHHhCceeeeeccccccCCCCeeee
Confidence 4688898777 999999999999999999999999 999999999999999988665321 344455
Q ss_pred HHHHHHhhccchhhHhhhhhheeeeecCcchhHHHHHHHHHHHHHHHHHHHHH-Hhhc
Q 039541 176 STIRFVAGFFRAPIMTSVIVLLSEMVSKRWRGQVVIIGFTFFSFGLVSLPAVA-YLSR 232 (521)
Q Consensus 176 ~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~i~~~i~-~~~~ 232 (521)
+..-++.+++.+........++.+..|++++|...++++...++|..+++.++ .+.+
T Consensus 355 ~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~egt~~al~~s~~~lg~~v~~~~gg~l~~ 412 (468)
T TIGR00788 355 LGDSIIAEVLAQLKFMPFLVLLARLCPSGCESSVFALLASILHLGSSVSGFLGVLLME 412 (468)
T ss_pred eehhHHHHHHHHHHHccHHHHHHHhCCCCceehHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66678999999999999999999999999999999999999999999999874 4444
No 251
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=98.34 E-value=1.4e-05 Score=74.77 Aligned_cols=123 Identities=14% Similarity=-0.053 Sum_probs=96.5
Q ss_pred HHhhccCCCccH---HHHHHHHHHHhHhHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHhcCCchH-HHHHHHHHHHH
Q 039541 348 LLLGVGNLSFNI---YLSLAFNGLLDIPAYLLTFILIERWSRKSSILTFCILSGTCSAICVAIGDEQE-VLQIGLELASF 423 (521)
Q Consensus 348 ~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~i~~~~~~~~~~~~~-~~~~~~~~~~~ 423 (521)
+|.+.+.+..+. .........+-.++++..+++.+|+|+|+-++.+..++++++.++.-...... ...++..++.+
T Consensus 36 ip~l~~~f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~gyk~gi~lgL~l~avg~~lF~pAa~~~~y~~FL~~lFila 115 (422)
T COG0738 36 IPHLKEVFDLTYFEASLIQFAFFGGYFIMSLPAGLLIKKLGYKAGIVLGLLLYAVGAALFWPAASSKSYGFFLVALFILA 115 (422)
T ss_pred HHHHHHHhCccHHHHHHHHHHHHHHHHHHhccHHHHHHHhhhHHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHH
Confidence 455444444433 33334444566678889999999999999999999999999988864433322 45667778888
Q ss_pred HHHHHHHHHHHHhhccccCchhhhhhhHHHHHhhhhhhhHHHHHHHh
Q 039541 424 FSACVAFNVLLVFGTELFTTCVRNSTTSLVRQAVNLGAAFSPVLISA 470 (521)
Q Consensus 424 ~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~ 470 (521)
.+.+........++..+.+++....-+.+...++.+|++++|.+++.
T Consensus 116 ~Gi~~LetaaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g~~ 162 (422)
T COG0738 116 SGIGLLETAANPYVTLLGKPESAAFRLNLAQAFNGLGAILGPLLGSS 162 (422)
T ss_pred hhhHHHHhccchHHHHhCCchhHHHHHHHHHHhhhhHHHHHHHHHHH
Confidence 88888889999999999999888888999999999999999999864
No 252
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=98.34 E-value=6.9e-05 Score=69.29 Aligned_cols=321 Identities=13% Similarity=0.062 Sum_probs=167.4
Q ss_pred CcceeeecceeeCCccccchhhHHHHHHHHHHhhhhhhhccc-----cCCCCchHHHHH-HHHHHHHHHHHHhc------
Q 039541 101 DTTIISDWSLECAGSSILSGLPSSCFFIGCLLGGLALSTLGD-----SSSLGRKKLLFL-SCFAMSITALATIF------ 168 (521)
Q Consensus 101 ~~~i~~~~~~~~~~~~~~~~~~~s~~~lg~~i~~~~~g~l~d-----r~~~Grr~~l~~-~~~~~~~~~~~~~~------ 168 (521)
+|.+-+.=|.|-++. +...-++ ..+ .--++|.++.| | +||||..++ ...+.+....+.+.
T Consensus 53 iP~lL~ak~vSyt~~----a~fS~ay-~P~-sLKllWaPiVDs~y~k~--~GrrksWvvp~q~llG~~mllLs~~v~~~~ 124 (510)
T KOG3574|consen 53 IPLLLQAKGVSYTSQ----AIFSFAY-WPF-SLKLLWAPIVDSVYSKR--FGRRKSWVVPCQYLLGLFMLLLSYLVDRGL 124 (510)
T ss_pred hHHHhcCCCcchhhh----hhhhhhh-hHH-HHHHHHHhhhHHHHHHh--hccccceeeehHHHHHHHHHHHhhCCCccc
Confidence 677777666766554 3332222 111 23467889999 8 999987654 33333333333222
Q ss_pred -----cccHHHHHHHHHHhhccchhhHhhhhhheeeeecCcchhHHHHHHHHHHHHHHHHHHHHHHhhc--------CCc
Q 039541 169 -----ANNIWIYSTIRFVAGFFRAPIMTSVIVLLSEMVSKRWRGQVVIIGFTFFSFGLVSLPAVAYLSR--------GSS 235 (521)
Q Consensus 169 -----~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~i~~~i~~~~~--------~~~ 235 (521)
.++...+....++.-+..+.--.+.-.+.-.+..+++-|-+......+.+.|.+++..+-..++ -.+
T Consensus 125 g~ng~~p~v~~lt~~f~LLnflaAtQDIAVDgwALtmLs~e~lgyaST~q~Vg~~~GyfL~~~ifLaL~s~dF~N~y~rs 204 (510)
T KOG3574|consen 125 GGNGGLPNVVALTLLFLLLNFLAATQDIAVDGWALTMLSRENLGYASTCQSVGQTAGYFLGNVVFLALESPDFCNTYLRS 204 (510)
T ss_pred ccCCCCcchHHHHHHHHHHHHHHhhhhhhhhHHHHHhcCHhhcCchhHHHHHHHhhhHHhhcceeeEecChhhhhHHHhc
Confidence 2344444445566666666666777777777888899898888888888888887765411111 012
Q ss_pred hh---------HHHHHHHHHHHHHHhhhceeeecchhHHHhcCCHHHHHHHHHHHhhhcCCCCCCCccccccCCCCCccc
Q 039541 236 WK---------MLYVWTSIPSIVCCIIIYPFISESPRWLFIHGHEAEAMAVLKRLASRSNYQSDYGLESCCLSNMPPKAK 306 (521)
Q Consensus 236 wr---------~~f~~~~~~~~~~~~~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (521)
|. ...++.+.+.++...+..+.-+|.+.. ..+|....+
T Consensus 205 ~P~~~g~ItL~gy~~fwg~~~~vat~Lv~~~kke~~~~-----~~~e~~~~i---------------------------- 251 (510)
T KOG3574|consen 205 IPLDQGFITLAGYLWFWGALFIVATTLVALLKKENDES-----VDEELELGI---------------------------- 251 (510)
T ss_pred CcCccceEEhhHHHHHHHHHHHHHHHHHHHhcCCCchh-----hhhhhhcCH----------------------------
Confidence 22 223333444444442333332332210 000000000
Q ss_pred cCCCcccccccHHHHhccHHHHHHHHHHHHHHHHHHHHHHhHHhhccCCCccHHHHHHHHHHHhHhHHHHHHHHHhhcCC
Q 039541 307 NVIPKLDLYSSLKDLFNRKWALRRLLTIMALAFGIGVVYFGLLLGVGNLSFNIYLSLAFNGLLDIPAYLLTFILIERWSR 386 (521)
Q Consensus 307 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~ 386 (521)
.+.+.-++++++-|..+....+....-++....--..+.-+-+.|.+......+. +..++..++.++..-|+..
T Consensus 252 -----~~~yk~l~~vLklk~v~~la~i~lt~K~gf~a~da~t~LkLle~Gv~ke~Lal~~-v~~~plqI~l~~~~gk~ta 325 (510)
T KOG3574|consen 252 -----HESYKLLRDVLKLKSVRWLAGILLTGKLGFQAADALTSLKLLEHGVPKEELALIA-VPLVPLQIALPLYIGKWTA 325 (510)
T ss_pred -----HHHHHHHHHHHcCccHHHHHHHHHHHHHHhhhhhhccchHHHHcCCChhHheeee-eehhhHHHhhhhhheeecC
Confidence 0111245677777776655555544444444443344444445555443333222 5566666666666666532
Q ss_pred --ch--------HHHHHHHHHHHHHHH-HHhcCC-chH------HHHHHHHHHHHHHHHHHHHHHHHhhccccCchhhhh
Q 039541 387 --KS--------SILTFCILSGTCSAI-CVAIGD-EQE------VLQIGLELASFFSACVAFNVLLVFGTELFTTCVRNS 448 (521)
Q Consensus 387 --~~--------~~~~~~~~~~i~~~~-~~~~~~-~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ 448 (521)
|+ ...+........+.. ...... .+. ...+....+.++.....+...++..+++.++...|+
T Consensus 326 ~~~pl~~~lka~~~R~~~~~~~t~Lv~~~~~~~~~~G~~~~~~~il~i~~y~~~~~~~ts~fv~~maf~aqisdp~iggT 405 (510)
T KOG3574|consen 326 GPRPLNVFLKAVPYRLGGGLVQTALVWWTPTLGHSDGTFPRGYYILLITSYAFHQVFVTSMFVSGMAFHAQISDPAIGGT 405 (510)
T ss_pred CCCcchHHHHhhhHHHHHHHHHHHHHhhhcccccCCCceeechHHHHHHHHHHhhhHHHHHHHHHHHHHhhcCCcccCcc
Confidence 22 112222221111111 111111 100 122223445555555666778888999999999999
Q ss_pred hhHHHHHhhhhhhhHHHHHH
Q 039541 449 TTSLVRQAVNLGAAFSPVLI 468 (521)
Q Consensus 449 ~~~~~~~~~~~g~~~~p~~~ 468 (521)
.+.+.|+..++|+---..+.
T Consensus 406 ymTlLNTLsnLGg~wp~tv~ 425 (510)
T KOG3574|consen 406 YMTLLNTLSNLGGNWPGTVA 425 (510)
T ss_pred HHHHHHHHHHhcCCcHHHHH
Confidence 99999999999876444433
No 253
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=98.32 E-value=5.8e-07 Score=64.63 Aligned_cols=70 Identities=21% Similarity=0.358 Sum_probs=66.0
Q ss_pred CcceeeecceeeCCccccchhhHHHHHHHHHHhhhhhhhccccCCCCchHHHHHHHHHHHHHHHHHhccccHHHHH
Q 039541 101 DTTIISDWSLECAGSSILSGLPSSCFFIGCLLGGLALSTLGDSSSLGRKKLLFLSCFAMSITALATIFANNIWIYS 176 (521)
Q Consensus 101 ~~~i~~~~~~~~~~~~~~~~~~~s~~~lg~~i~~~~~g~l~dr~~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~ 176 (521)
+|.+++|.++|.++. |++.+..++|+.+|++...++.++ ..+++.+..+++...+..+.+++.++++.+.
T Consensus 15 LP~M~~~~~ls~~~a----g~lasaNy~GYL~GAl~~~~~~~~--~~~~~~~~~~l~~~~~~~~~ma~~~~~~~w~ 84 (85)
T PF06779_consen 15 LPLMQADGGLSLSQA----GWLASANYLGYLVGALLASRLPRH--SRPRRLLRAGLLLTVLSTAAMALTHSFWLWS 84 (85)
T ss_pred hHHHHHhcCCCHHHH----HHHHHHHHHHHHHHHHHHHHHHhc--ccHHHHHHHHHHHHHHHHHHHHHHhchHHHh
Confidence 999999999999887 999999999999999999999999 8999999999999999999999999887653
No 254
>PRK11462 putative transporter; Provisional
Probab=98.30 E-value=3.3e-05 Score=77.39 Aligned_cols=110 Identities=18% Similarity=0.247 Sum_probs=75.9
Q ss_pred hhhHHHHHHHHHHhhhhhhhccccCCCCchHHHHHHHHHHHHHHHHHhccc--cHHHHHHHHHHhhccchhhHhhhhhhe
Q 039541 120 GLPSSCFFIGCLLGGLALSTLGDSSSLGRKKLLFLSCFAMSITALATIFAN--NIWIYSTIRFVAGFFRAPIMTSVIVLL 197 (521)
Q Consensus 120 ~~~~s~~~lg~~i~~~~~g~l~dr~~~Grr~~l~~~~~~~~~~~~~~~~~~--~~~~l~~~r~l~G~~~g~~~~~~~~~i 197 (521)
+.+...+.++.+++.+++++++|| +|+|+++..+..+.++..++..+.+ +.+.+++.-++.|++.+...+...+++
T Consensus 266 ~~~l~~~~i~~iig~~l~~~l~~r--~gkk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~l~~~m~ 343 (460)
T PRK11462 266 VAFLTTYCVGNLIGSALAKPLTDW--KCKVTIFWWTNALLAVISLAMFFVPMQASITMFVFIFVIGVLHQLVTPIQWVMM 343 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH--hChHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 567778888999999999999999 9999988765554444344433332 233444555677888777777777777
Q ss_pred eeeec-------CcchhHHHHHHHHHHHHHHHHHHHH-HHhh
Q 039541 198 SEMVS-------KRWRGQVVIIGFTFFSFGLVSLPAV-AYLS 231 (521)
Q Consensus 198 ~~~~~-------~~~rg~~~~~~~~~~~~G~~i~~~i-~~~~ 231 (521)
+|..+ +++.|...+.......+|..+++.+ |.++
T Consensus 344 ad~~d~~e~~tG~r~~g~~~a~~~f~~Klg~alg~~i~g~iL 385 (460)
T PRK11462 344 SDTVDYGEWCNGKRLTGISFAGTLFVLKLGLAFGGALIGWML 385 (460)
T ss_pred HHhHhhhHHhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77766 3333565677667777888887766 4444
No 255
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=98.29 E-value=0.0015 Score=63.16 Aligned_cols=255 Identities=15% Similarity=0.145 Sum_probs=144.2
Q ss_pred cceeeecceeeCCccccchhhHHHHHH-HHHHhhhhhhhccccCCCCchHHHHHHHHHHHHHHHHHhcc---------cc
Q 039541 102 TTIISDWSLECAGSSILSGLPSSCFFI-GCLLGGLALSTLGDSSSLGRKKLLFLSCFAMSITALATIFA---------NN 171 (521)
Q Consensus 102 ~~i~~~~~~~~~~~~~~~~~~~s~~~l-g~~i~~~~~g~l~dr~~~Grr~~l~~~~~~~~~~~~~~~~~---------~~ 171 (521)
..+++.+.++.... ....++-+..-+ +..+..++.+++.++ +.|.+++.+-+..+....+++++. ++
T Consensus 47 R~lKDslvv~~~ga-e~I~FlK~~~vlP~avif~~iy~kl~~~--lt~~~vF~~~~~~F~~fF~LFa~Vi~P~~~~~hp~ 123 (509)
T COG3202 47 RSLKDSLVVTRQGA-ESISFLKTWGVLPSAVIFTIIYQKLLNI--LTREKVFYIILGFFLGFFALFAFVIYPYKDILHPD 123 (509)
T ss_pred HHhhhheEeecCcc-hhhHHHHHHHhchHHHHHHHHHHHHHhh--cCHHHHHHHHHHHHHHHHHHHHHHHhccccccCCC
Confidence 34566666664444 555777777777 777888999999999 999999988888777777777653 11
Q ss_pred -----------------------HHHHHHHHHHhhccchhhHh-hhhhheeeeecCcchhHHHHHHHHHHHHHHHHHHHH
Q 039541 172 -----------------------IWIYSTIRFVAGFFRAPIMT-SVIVLLSEMVSKRWRGQVVIIGFTFFSFGLVSLPAV 227 (521)
Q Consensus 172 -----------------------~~~l~~~r~l~G~~~g~~~~-~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~i~~~i 227 (521)
.|...+...+.=+=...... .-.....|.+..++-.|..++++.+.+++..++..+
T Consensus 124 ~~~~~~~~~~~p~~l~~~ili~~~Ws~s~~Yi~aELWgslV~S~lFw~faNeitt~~eakRFy~lf~l~~ni~lllsg~~ 203 (509)
T COG3202 124 PEFSRDLFADLPMFLKWFILIVGEWSYSLFYIMAELWGSLVLSLLFWQFANEITTIEEAKRFYPLFGLGANISLLLSGEV 203 (509)
T ss_pred HHHHHHHHhhCCccceeeeEeecchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHhhhhHHHHHHHHHHHHHHHHHH
Confidence 12222222222222222222 334567899998999999999999999999987766
Q ss_pred -HHhhcCC-c---------hhHHHHHHHHHHHHHHhhhceee----ecchhHHHhcCCHHHHHHHHHHHhhhcCCCCCCC
Q 039541 228 -AYLSRGS-S---------WKMLYVWTSIPSIVCCIIIYPFI----SESPRWLFIHGHEAEAMAVLKRLASRSNYQSDYG 292 (521)
Q Consensus 228 -~~~~~~~-~---------wr~~f~~~~~~~~~~~~~~~~~~----~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (521)
.++.++. . -+..+.+.+..+++.. ++..++ .+.|+... ++.
T Consensus 204 ~~~~~k~~~~~~~~~~~~~~~~~~~vi~~~~~i~~-~l~~~~~r~il~~~~f~~------~~~----------------- 259 (509)
T COG3202 204 TSWLSKHRDALASEFKDLLLQILFIVIVILGIIAI-LLYRYINRNVLTDPLFYL------RAK----------------- 259 (509)
T ss_pred HHHHhhchhhHhHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHhhcccCcchhH------HHh-----------------
Confidence 5555411 1 2333333343333333 332222 22222110 000
Q ss_pred ccccccCCCCCccccCCCcccccccHHHHhccHHHHHHHHHHHHHHHHHHHHHHhH----HhhccCCC-ccH--HHHHHH
Q 039541 293 LESCCLSNMPPKAKNVIPKLDLYSSLKDLFNRKWALRRLLTIMALAFGIGVVYFGL----LLGVGNLS-FNI--YLSLAF 365 (521)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~-~~~--~~~~~~ 365 (521)
.++++++.+....++++-+.++|.++...+....+..+.+.....- ....++.. ... ......
T Consensus 260 ----------~kk~~~k~k~~~~~s~k~i~~SkyL~~ial~vl~Y~v~inLvE~~wKs~ik~~~~~~~~~~~f~~~~~~~ 329 (509)
T COG3202 260 ----------KKKKKKKLKLGLIESFKMILRSKYLGAIALLVLAYGVSINLVEGVWKSGIKELYPTTNEYTAFMGRFQIW 329 (509)
T ss_pred ----------cccccccccCcHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhcCChhHHHHHHHHHHHH
Confidence 0011122223334577888899987776666666666665544321 11111111 111 111233
Q ss_pred HHHH-hHhHHHHHHHHHhhcCCchHHHHH
Q 039541 366 NGLL-DIPAYLLTFILIERWSRKSSILTF 393 (521)
Q Consensus 366 ~~~~-~~~~~~~~g~l~dr~g~~~~~~~~ 393 (521)
.++. .++...+++-+.+|.|-....++.
T Consensus 330 tgvv~~v~~~~~~s~~ir~~GW~~~Alit 358 (509)
T COG3202 330 TGVVSLVVFLFPGSNLIRRVGWFTGALIT 358 (509)
T ss_pred HHHHHHHHHHhhhHHHHHHhhHHHHHHHH
Confidence 4444 445566788899998876544443
No 256
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=98.29 E-value=1.3e-08 Score=102.20 Aligned_cols=154 Identities=19% Similarity=0.251 Sum_probs=102.1
Q ss_pred CcceeeecceeeCCccccchhhHHHHHHHHHHhhhhhhhccccCCCCchHHHHHHHHHHHHHHHHHh--c---ccc----
Q 039541 101 DTTIISDWSLECAGSSILSGLPSSCFFIGCLLGGLALSTLGDSSSLGRKKLLFLSCFAMSITALATI--F---ANN---- 171 (521)
Q Consensus 101 ~~~i~~~~~~~~~~~~~~~~~~~s~~~lg~~i~~~~~g~l~dr~~~Grr~~l~~~~~~~~~~~~~~~--~---~~~---- 171 (521)
.+.+.+..+.+... .......+...++.++..++.|| +|||++++.+..+.+++.+..+ . .++
T Consensus 276 ~~~i~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~--~GRr~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (451)
T PF00083_consen 276 SPSIFENAGISNSF------LATLILGLVNFLGTLLAIFLIDR--FGRRKLLIIGLLLMAICSLILGIIFFLGVSSSSWW 347 (451)
T ss_pred cccccccccccccc------ccccccccccccccccccccccc--ccccccccccccccccccccccccccccccccccc
Confidence 45666777766641 11122234444666777799999 9999999999999888888775 1 121
Q ss_pred -HHHHHHHHHHhhccchhhHhhhhhheeeeecCcchhHHHHHHHHHHHHHHHHHHHH-HHhhcCCchhHHHHHHHHHHHH
Q 039541 172 -IWIYSTIRFVAGFFRAPIMTSVIVLLSEMVSKRWRGQVVIIGFTFFSFGLVSLPAV-AYLSRGSSWKMLYVWTSIPSIV 249 (521)
Q Consensus 172 -~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~i~~~i-~~~~~~~~wr~~f~~~~~~~~~ 249 (521)
...+............+..+....+..|.+|.+.|+++.++......++.++++.+ ..+.+..+-...+++.++++++
T Consensus 348 ~~~~i~~~~l~~~~~~~g~~~~~~~~~~ElfPt~~R~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~i 427 (451)
T PF00083_consen 348 SILSIVFLALFFAFFSLGWGPLPWIYTAELFPTKVRSTGIGLSYAVGRIGGFIIPFLFPYLFNNLGGWGVFLIFAGVCLI 427 (451)
T ss_pred ccccceeeeeccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccchhhHHHHHH
Confidence 22222222221112213456667889999999999999999998888888888777 4555544424455566666666
Q ss_pred HHhhhceeeecch
Q 039541 250 CCIIIYPFISESP 262 (521)
Q Consensus 250 ~~~~~~~~~~esp 262 (521)
..++.++++|||.
T Consensus 428 ~~i~~~~~lpET~ 440 (451)
T PF00083_consen 428 AIIFVYFFLPETK 440 (451)
T ss_pred HHhheeEEEeeCC
Confidence 6668889999984
No 257
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=98.23 E-value=8.4e-07 Score=85.46 Aligned_cols=134 Identities=16% Similarity=0.167 Sum_probs=121.4
Q ss_pred ccchhhHHHHHHHHHHhhhhhhhccccCCCCchHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHhhccchhhHhhhhhh
Q 039541 117 ILSGLPSSCFFIGCLLGGLALSTLGDSSSLGRKKLLFLSCFAMSITALATIFANNIWIYSTIRFVAGFFRAPIMTSVIVL 196 (521)
Q Consensus 117 ~~~~~~~s~~~lg~~i~~~~~g~l~dr~~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~ 196 (521)
.+.|........|-++.-++.+++.+| +|+-+++.+++.+..+=.+..++.+|.|+.+-.-+++|+..+..+.+..+|
T Consensus 406 ~LfGv~~a~~~~gEI~~~ffs~klI~k--iGHv~v~~lgLa~~~~Rf~~~S~L~n~W~vLPieilqgit~aliWaa~~sY 483 (618)
T KOG3762|consen 406 TLFGVVSALCHAGEILFYFFSFKLIEK--IGHVNVMYLGLACNVGRFLYYSYLQNPWMVLPIEILQGITHALIWAAIISY 483 (618)
T ss_pred eeeeehhhhhccchHHHHHHHHHHHHH--hcccceeeehhhHHHHHHHHHHHhcCchheeeHHHHHHHHHHHHHHHHHHH
Confidence 566888888888999999999999999 999999999999999999999999999999999999999999999999999
Q ss_pred eeeeecCcchhHHHHHHHH-HHHHHHHHHHHH-HHhhcCCchhHHHHHHHHHHHHHHh
Q 039541 197 LSEMVSKRWRGQVVIIGFT-FFSFGLVSLPAV-AYLSRGSSWKMLYVWTSIPSIVCCI 252 (521)
Q Consensus 197 i~~~~~~~~rg~~~~~~~~-~~~~G~~i~~~i-~~~~~~~~wr~~f~~~~~~~~~~~~ 252 (521)
++...||+-|..+.++++. ..++|--+|.++ |.+...++=|..|.+.++.+++.++
T Consensus 484 ~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslIGG~~v~~fg~~ttf~~~giAcl~~l~ 541 (618)
T KOG3762|consen 484 ASHVAPPGLRATAQGLLQGIFHGLGKGLGSLIGGFVVERFGARTTFRIFGIACLVTLA 541 (618)
T ss_pred HHhhCCCcchHHHHHHHHHHhcccCcchhhhhhhhhheeehhHHHHHHHHHHHHHHHH
Confidence 9999999999999999764 557888888888 5677788999999998888887763
No 258
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=98.13 E-value=2e-05 Score=65.05 Aligned_cols=108 Identities=16% Similarity=0.146 Sum_probs=92.8
Q ss_pred hhhHHHHHHHHHHhhhhhhhccccCCCCchHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHhhccchhhHhhhhhheee
Q 039541 120 GLPSSCFFIGCLLGGLALSTLGDSSSLGRKKLLFLSCFAMSITALATIFANNIWIYSTIRFVAGFFRAPIMTSVIVLLSE 199 (521)
Q Consensus 120 ~~~~s~~~lg~~i~~~~~g~l~dr~~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~ 199 (521)
-.-.++.+....++.++.+.+.++ +|.|+.++++.+.+.+-.... +-++.+.++.+-.+.|++.+..+.....++.+
T Consensus 40 ~~slai~Y~~~~~s~l~~P~iv~~--lg~K~sm~lg~~~y~~y~~~~-~~~~~~~l~~~s~l~G~~~a~lW~aqg~ylt~ 116 (156)
T PF05978_consen 40 YYSLAILYGSFAISCLFAPSIVNK--LGPKWSMILGSLGYAIYIASF-FYPNSYTLYPASALLGFGAALLWTAQGTYLTS 116 (156)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHH--HhhHHHHHHHHHHHHHHHHHH-HhhhHHHHHHHHHHHhhhhHHhhHhhhHHHHH
Confidence 444566677788888999999999 999999999999988554443 56788899999999999999999999999999
Q ss_pred eecCcchhHHHHHHHHHHHHHHHHHHHHHHh
Q 039541 200 MVSKRWRGQVVIIGFTFFSFGLVSLPAVAYL 230 (521)
Q Consensus 200 ~~~~~~rg~~~~~~~~~~~~G~~i~~~i~~~ 230 (521)
..+++.|++-.+++......+.++|.++..+
T Consensus 117 ~s~~~~~~~~~~ifw~i~~~s~i~G~~~~~~ 147 (156)
T PF05978_consen 117 YSTEETIGRNTGIFWAIFQSSLIFGNLFLFF 147 (156)
T ss_pred cCCHHHHhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999988888888888877544
No 259
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=98.13 E-value=0.0026 Score=63.23 Aligned_cols=284 Identities=16% Similarity=0.208 Sum_probs=156.2
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHHhhhhccccCCcccccCCcccccCCccccccccCcceecCCCCcceeeecceeeCCc
Q 039541 36 NLGLPQFIQVILISLLLIFESQQTFISVYTDEEPTWHCINNTTTCSSSSDICTLSKSAWAWDRPSDTTIISDWSLECAGS 115 (521)
Q Consensus 36 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~p~~~c~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 115 (521)
+..+..+.-++.+.+..++..+.....=.. ++.+=++....
T Consensus 17 pi~~~E~~k~~~l~~m~f~i~f~y~~lR~~---------------------------------------KD~lvvt~~ga 57 (491)
T PF03219_consen 17 PIHRSELKKFLPLALMFFFILFNYTILRDL---------------------------------------KDTLVVTAQGA 57 (491)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHh---------------------------------------cCeEEEecCCh
Confidence 445667777777777777777766554333 33333332222
Q ss_pred cccchhhHHHHHH-HHHHhhhhhhhccccCCCCchHHHHHHHHHHHHHHHHHhcc---------cc--------------
Q 039541 116 SILSGLPSSCFFI-GCLLGGLALSTLGDSSSLGRKKLLFLSCFAMSITALATIFA---------NN-------------- 171 (521)
Q Consensus 116 ~~~~~~~~s~~~l-g~~i~~~~~g~l~dr~~~Grr~~l~~~~~~~~~~~~~~~~~---------~~-------------- 171 (521)
.....+-....+ +..+...+..++++| ++|.+++.+....+.....+.++. ++
T Consensus 58 -e~I~flK~~~vlP~a~~f~~~y~kl~n~--~s~~~lFy~~~~~F~~fF~~f~~vlyP~~~~lhp~~~~~~~~~~~~~~~ 134 (491)
T PF03219_consen 58 -EVIPFLKVWGVLPVAILFTILYSKLSNR--LSREKLFYIIIIPFLGFFALFAFVLYPNRDILHPDAFADKLLAILPPGF 134 (491)
T ss_pred -hHHHHHHHHHHHHHHHHHHHHHHHHHhc--CCHHHHHHHHHHHHHHHHHHHHHHHhhchhhcCCCHHHHHhhhhccchH
Confidence 333555444444 445557778999999 999999887776666666655542 11
Q ss_pred --------HHHHHHHHHHhhccchhhHh-hhhhheeeeecCcchhHHHHHHHHHHHHHHHHHHHH-HHhhc---------
Q 039541 172 --------IWIYSTIRFVAGFFRAPIMT-SVIVLLSEMVSKRWRGQVVIIGFTFFSFGLVSLPAV-AYLSR--------- 232 (521)
Q Consensus 172 --------~~~l~~~r~l~G~~~g~~~~-~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~i~~~i-~~~~~--------- 232 (521)
.|...+..++.-+-.....+ .-..+..|.++.++-.|..++++.+.++|.+++..+ .++.+
T Consensus 135 ~~~i~~~~~Wt~slfYv~aElwgsvvlSlLFW~fAN~itt~~eAKRfYpl~g~ganigli~sG~~~~~~~~~~~~~~~~~ 214 (491)
T PF03219_consen 135 KGFIAMFRNWTFSLFYVMAELWGSVVLSLLFWGFANEITTVEEAKRFYPLFGLGANIGLIFSGQLTSYFSSFLRKSLPAG 214 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccc
Confidence 12222223333332233333 456788999999999999999999999999998766 44443
Q ss_pred CCchhHHHHHHH----HHHHHHHhhhceeeecchhHHHhcCCHHHHHHHHHHHhhhcCCCCCCCccccccCCCCCccccC
Q 039541 233 GSSWKMLYVWTS----IPSIVCCIIIYPFISESPRWLFIHGHEAEAMAVLKRLASRSNYQSDYGLESCCLSNMPPKAKNV 308 (521)
Q Consensus 233 ~~~wr~~f~~~~----~~~~~~~~~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (521)
...|........ +.+++.. .....+.+.. ..+++.. +...+++++
T Consensus 215 ~~~~~~~l~~l~~~v~~~g~~i~-~~~~~~~~~v---l~~~~~~---------------------------~~~~~~kk~ 263 (491)
T PF03219_consen 215 VDAWELSLNSLMGIVLILGIVII-LLYRYMNKNV---LTDPRFY---------------------------PSAKKKKKK 263 (491)
T ss_pred cccHhHHHHHHHHHHHHHHHHHH-HHHHHHHHHc---cCccccc---------------------------hhhhccccc
Confidence 234654332222 1222222 2222221100 0000000 000111222
Q ss_pred CCcccccccHHHHhccHHHHHHHHHHHHHHHHHHHHHHhHHhhccCC-C----ccH--HHHHHHHHHHhHhHHHHHHHHH
Q 039541 309 IPKLDLYSSLKDLFNRKWALRRLLTIMALAFGIGVVYFGLLLGVGNL-S----FNI--YLSLAFNGLLDIPAYLLTFILI 381 (521)
Q Consensus 309 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~----~~~--~~~~~~~~~~~~~~~~~~g~l~ 381 (521)
+++.+..++++.++++|.++...+....+....+...+..-...++. . .+. .......++..++..++++.+.
T Consensus 264 k~k~s~~es~k~l~kS~yL~~Ia~lvi~Ygi~inLvE~~wK~~lk~~~~~~~~ysafmG~~~~~tGivtii~~~l~~~ii 343 (491)
T PF03219_consen 264 KPKMSLKESFKLLLKSKYLLCIALLVIAYGISINLVEVVWKSQLKQLYPDPNDYSAFMGKFSSWTGIVTIIMMFLSSNII 343 (491)
T ss_pred CCCccHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33334456788899999877777766666676666554432222211 1 111 1122334555566667889999
Q ss_pred hhcCCchHHHH
Q 039541 382 ERWSRKSSILT 392 (521)
Q Consensus 382 dr~g~~~~~~~ 392 (521)
+|+|-+....+
T Consensus 344 r~~GW~~~Ali 354 (491)
T PF03219_consen 344 RRFGWRTAALI 354 (491)
T ss_pred HHhhHHHHHHH
Confidence 99997765544
No 260
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=98.08 E-value=0.0001 Score=66.15 Aligned_cols=120 Identities=15% Similarity=0.035 Sum_probs=80.9
Q ss_pred HhhccCCCccHHHHHHH---HHHHhHhHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHhcCCc-----hHHHHHHHHH
Q 039541 349 LLGVGNLSFNIYLSLAF---NGLLDIPAYLLTFILIERWSRKSSILTFCILSGTCSAICVAIGDE-----QEVLQIGLEL 420 (521)
Q Consensus 349 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~i~~~~~~~~~~~-----~~~~~~~~~~ 420 (521)
|.+-+..+.+......+ ..++..+ +++.|.+.||+|.+.++.++.+...++...+...... +.|...+..+
T Consensus 26 ~~Lk~~l~~sq~~l~~l~~~~~~G~~~-G~~~G~l~d~~gp~~~l~iG~~~~~~GY~~~~l~~~~~i~~~~~~~~~~~~~ 104 (250)
T PF06813_consen 26 PQLKSRLGYSQSQLNTLSTAGDIGSYF-GILAGLLYDRFGPWVVLLIGAVLGFVGYGLLWLAVSGRIPSLPVWLMCLFLF 104 (250)
T ss_pred HHHHHHhCCCHHHHHHHHHHHHHHhhc-cHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCccCccchHHHHHHHH
Confidence 33344556655444333 3445444 4788999999999999999999999998877665322 1144444444
Q ss_pred HHHHHHHHHHHHHHHhhccccCchhhhhhhHHHHHhhhhhhhHHHHHHHh
Q 039541 421 ASFFSACVAFNVLLVFGTELFTTCVRNSTTSLVRQAVNLGAAFSPVLISA 470 (521)
Q Consensus 421 ~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~ 470 (521)
+.+.+.............+.||. +||++.|+.-....+++.+-..+...
T Consensus 105 l~~~s~~~~~ta~lvt~~~NFP~-~RG~vvgilk~~~GLSaai~t~i~~~ 153 (250)
T PF06813_consen 105 LGGNSSCWFNTASLVTCVRNFPR-SRGTVVGILKGFFGLSAAIFTQIYSA 153 (250)
T ss_pred HHcccHHHhhhHHHHHHHHhCcc-ccCceehhhhHHHHhHHHHHHHHHHH
Confidence 44454444445555666688885 79999999999998988877666643
No 261
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=97.83 E-value=0.0017 Score=65.98 Aligned_cols=146 Identities=12% Similarity=0.090 Sum_probs=109.5
Q ss_pred CcceeeecceeeCCccccchhhHHHHHHHHHHhhhhhhhccccCCCCchHHHHHHHHHHHHHHHHHhcccc---------
Q 039541 101 DTTIISDWSLECAGSSILSGLPSSCFFIGCLLGGLALSTLGDSSSLGRKKLLFLSCFAMSITALATIFANN--------- 171 (521)
Q Consensus 101 ~~~i~~~~~~~~~~~~~~~~~~~s~~~lg~~i~~~~~g~l~dr~~~Grr~~l~~~~~~~~~~~~~~~~~~~--------- 171 (521)
+..+.++++.+..++ .-..+.+.-......+..++++|- .+||-+++.++.++..+|.++..++..
T Consensus 61 v~ylt~~~~~~~~~a----a~~v~~f~G~~~~~~l~g~~laD~-f~gry~tI~~~s~i~~~G~~~lt~~a~~~~l~p~~~ 135 (571)
T KOG1237|consen 61 VTYLTLELHASGGGA----ANNVNAFGGTQFLLPLLGAFLADS-FLGRYFTINIGSLISLLGLFGLTLSAMIPALLPFMC 135 (571)
T ss_pred HHHHHHHhccchHHH----HHHHHHHhhHHHHHHHHHHHHHHH-HhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccc
Confidence 345567777776555 666666666667777889999997 569999999999888888655433211
Q ss_pred ----------------HHHHHHHHHHhhccchhhHhhhhhheeeeec---C-cch--hHHHHHHHHHHHHHHHHHHHH-H
Q 039541 172 ----------------IWIYSTIRFVAGFFRAPIMTSVIVLLSEMVS---K-RWR--GQVVIIGFTFFSFGLVSLPAV-A 228 (521)
Q Consensus 172 ----------------~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~---~-~~r--g~~~~~~~~~~~~G~~i~~~i-~ 228 (521)
...++.+.-+..+|.|+.-+...++-+|-++ + +++ ...+.++....++|..++..+ .
T Consensus 136 ~~~~~~~~c~~~s~~q~~~~~~~l~lia~G~gg~r~~~~~fGadQfd~~~~~~~~~~~~fFnW~yf~~~~g~l~a~t~~v 215 (571)
T KOG1237|consen 136 KFKPGGNVCESPSKLQLAVLYGALYLIALGAGGIRPCLLAFGADQFDELDPVEVKGIPSFFNWFYFSQNGGALLAQTVLV 215 (571)
T ss_pred cCCCCCCcccCcchHHHHHHHHHHHHheeccCCCCCcchhhcccccCccCcchhhCcccchhHHHHHHHHHHHHHHHHHH
Confidence 1366777788889999999999999999988 3 222 367788888889999988777 5
Q ss_pred HhhcCCchhHHHHHHHHHHHHHH
Q 039541 229 YLSRGSSWKMLYVWTSIPSIVCC 251 (521)
Q Consensus 229 ~~~~~~~wr~~f~~~~~~~~~~~ 251 (521)
+.=+..+|.+.|.+..+..++..
T Consensus 216 yiq~~~~w~lgf~i~~~~~~lai 238 (571)
T KOG1237|consen 216 YIQDNVGWKLGFGIPTVLNALAI 238 (571)
T ss_pred hhhhcccceeeccHHHHHHHHHH
Confidence 55467899999988887766665
No 262
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=97.81 E-value=0.00021 Score=70.55 Aligned_cols=133 Identities=19% Similarity=0.140 Sum_probs=98.9
Q ss_pred HHHHhHhHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHHHHHhhccccCchh
Q 039541 366 NGLLDIPAYLLTFILIERWSRKSSILTFCILSGTCSAICVAIGDEQEVLQIGLELASFFSACVAFNVLLVFGTELFTTCV 445 (521)
Q Consensus 366 ~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 445 (521)
.++..++.+...|.++||+|||..+......+.+..+.+.+.. ++..+ ..-...+.+..++...+++++....+.
T Consensus 71 ~~~~~~i~s~~iG~lSD~~grk~~L~~~~~~~~l~~~~~~~~~----~~~~~-~~~l~g~~~~~~s~~~a~vadis~~~~ 145 (463)
T KOG2816|consen 71 AGLLTLISSPLIGALSDRYGRKVVLLLPLFGTILPALCLLFQG----YWFFL-LLGLSGGFSAIFSVGFAYVADISSEEE 145 (463)
T ss_pred hHHHHHHHHhhhHHhhhhhhhhhhHHHHHHHHHHhHHHHHHHH----HHHhh-hcccccchhhhhhhhhhheeeccchhH
Confidence 4567778889999999999999999888887777776666543 23333 222223445667889999999999999
Q ss_pred hhhhhHHHHHhhhhhhhHHHHHHHh--hccchhHHHHHHHHHHHHHhHh-hhccccCCCCC
Q 039541 446 RNSTTSLVRQAVNLGAAFSPVLISA--GRQNEFLSFGVFGLVVFCFGFF-VVFLPETIGVT 503 (521)
Q Consensus 446 r~~~~~~~~~~~~~g~~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 503 (521)
|....|+.+.....+..++|.+.+. ...+....+.+..+..+++.+. .+++||+...+
T Consensus 146 R~~~~gll~~~~~~~~~~~p~~~~~~~~~~~~a~~f~ia~~~~~~~~~y~~~~l~Esl~~~ 206 (463)
T KOG2816|consen 146 RSSSIGLLSGTFGAGLVIGPALGGYLVKFLGIALVFLIAAASGILSLLYMLLFLPESLQEK 206 (463)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhhccccccCcc
Confidence 9999999999999999999999986 3345666676666666666554 45677765544
No 263
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=97.76 E-value=0.00039 Score=67.99 Aligned_cols=141 Identities=13% Similarity=0.102 Sum_probs=94.9
Q ss_pred HHHHHHHHHHhHhHHHHHHHHHhhcCC-chHHHHHHHHHHHHHHHHHhcCCc-h-H-HHHHHHHHHHHHHHHHHHHHHHH
Q 039541 360 YLSLAFNGLLDIPAYLLTFILIERWSR-KSSILTFCILSGTCSAICVAIGDE-Q-E-VLQIGLELASFFSACVAFNVLLV 435 (521)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~g~l~dr~g~-~~~~~~~~~~~~i~~~~~~~~~~~-~-~-~~~~~~~~~~~~~~~~~~~~~~~ 435 (521)
+.......++..+++++.|+...|.+. |+.++.+.+++.++.+++...... + . ++.+++-++.|++.+ .....-.
T Consensus 74 G~viaa~slg~~i~~liF~~Ws~k~~~~k~Pli~s~ii~~~g~llY~~l~~~~~~~~y~mL~~R~l~Gvg~~-n~a~lR~ 152 (488)
T KOG2325|consen 74 GLVIAASSLGHAIFSLIFGIWSNKTGSVKKPLIVSFLIAIIGNLLYLALAYVPNGVKYLMLVARILTGVGVG-NFAVLRA 152 (488)
T ss_pred hHHHHHHHHHHHhcchhhcccccccCCcccCHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHcCcCcc-cHHHHHH
Confidence 344455668888899999999999885 788899999999998887433222 1 1 555666666666543 3578888
Q ss_pred hhccccCchhhhhhhHHHHHhhhhhhhHHHHHH----Hhhc-----------cchhHHHHHHHHHHHHHhHh-hhccccC
Q 039541 436 FGTELFTTCVRNSTTSLVRQAVNLGAAFSPVLI----SAGR-----------QNEFLSFGVFGLVVFCFGFF-VVFLPET 499 (521)
Q Consensus 436 ~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~----~~~~-----------~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 499 (521)
++++....+.|.++++..+....+|.++||.+. ++.. .-+..+-++.+++.++..+. .++++|.
T Consensus 153 Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp~~q~~f~~Lg~~G~~i~~~~~~n~YTap~w~m~i~~i~~~v~i~~~f~E~ 232 (488)
T KOG2325|consen 153 YIADASTVEDRPRAFAATSGGFVLGIILGPTIQLAFTPLGEKGFMILPGLIFNMYTAPAWLMAILWIIYIVIILFFFKEV 232 (488)
T ss_pred HHHhccCccchHHHHHHhhhHHHHHHHHhHHHHHHHhhhcCCceEEcCcceEEecchHHHHHHHHHHHHHHHHHhheeec
Confidence 999988888889998888877777777777654 2211 12344555566666655554 4556654
Q ss_pred CC
Q 039541 500 IG 501 (521)
Q Consensus 500 ~~ 501 (521)
.+
T Consensus 233 ~~ 234 (488)
T KOG2325|consen 233 YR 234 (488)
T ss_pred cc
Confidence 43
No 264
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=97.75 E-value=0.007 Score=56.63 Aligned_cols=146 Identities=15% Similarity=0.078 Sum_probs=91.2
Q ss_pred CCCccHHH---HHHHHHHHhHhHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHH
Q 039541 354 NLSFNIYL---SLAFNGLLDIPAYLLTFILIERWSRKSSILTFCILSGTCSAICVAIGDEQEVLQIGLELASFFSACVAF 430 (521)
Q Consensus 354 ~~~~~~~~---~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 430 (521)
++|.+... ......+.+.+...+.|.++||+|||+..+...++.+++++.-.. ++. ..+++.=++.|+.....+
T Consensus 63 ~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~cl~~cily~~scl~k~~-~~~--~~L~~GRvlgGiaTSLLf 139 (354)
T PF05631_consen 63 SYGFSEHQIAILFVAGFASSAIFGTFVGSLADRYGRKKACLLFCILYSLSCLTKHS-SNY--PVLLLGRVLGGIATSLLF 139 (354)
T ss_pred HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhc-ccc--HHHHHHHHHHHHHHHHHH
Confidence 45554332 233334556677788899999999999999999988888864432 333 577777888888888888
Q ss_pred HHHHHhhc-----cccCchhhhhhhHHHHH-hhhhhhh----HHHHHHHhhccchhHHHHHHHHHHHHHhHhhh-ccccC
Q 039541 431 NVLLVFGT-----ELFTTCVRNSTTSLVRQ-AVNLGAA----FSPVLISAGRQNEFLSFGVFGLVVFCFGFFVV-FLPET 499 (521)
Q Consensus 431 ~~~~~~~~-----~~~~~~~r~~~~~~~~~-~~~~g~~----~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 499 (521)
+..-++.. .-+|++..+...+.... .+.+-++ ++..+......+...+|.....+.+++.++.. ..+|.
T Consensus 140 S~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~~g~vaPF~~a~~~l~~~~~~I~~~W~EN 219 (354)
T PF05631_consen 140 SAFESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVLADWFGFGPVAPFDAAIVLLAVAAVLILKTWPEN 219 (354)
T ss_pred HHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHhCCCCcchHHHHHHHHHHHHHHHHhccccc
Confidence 75444432 23566666666654442 2223233 33344444444567788887777777666543 34555
Q ss_pred CCC
Q 039541 500 IGV 502 (521)
Q Consensus 500 ~~~ 502 (521)
.+.
T Consensus 220 yg~ 222 (354)
T PF05631_consen 220 YGD 222 (354)
T ss_pred CCC
Confidence 443
No 265
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=97.64 E-value=0.0043 Score=59.39 Aligned_cols=108 Identities=13% Similarity=0.067 Sum_probs=71.8
Q ss_pred HHHHHHHHHHhHhHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHhcCCc---hH-H--HHHHHHHHHHHHHHHHHHHH
Q 039541 360 YLSLAFNGLLDIPAYLLTFILIERWSRKSSILTFCILSGTCSAICVAIGDE---QE-V--LQIGLELASFFSACVAFNVL 433 (521)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~i~~~~~~~~~~~---~~-~--~~~~~~~~~~~~~~~~~~~~ 433 (521)
.+...+..+..++..+.+.|+.||+|-|....++..+.+++..+=...... +. + .......+.+...-......
T Consensus 82 ~wlsmIym~v~vp~gf~~mw~ldk~GLR~a~llgt~ln~iGa~Ir~iss~p~v~~~f~~~l~~~Gq~iaa~Aq~Fim~lP 161 (480)
T KOG2563|consen 82 DWLSMIYMVVSVPFGFAAMWILDKFGLRTALLLGTVLNGIGAWIRLISSLPFVPPLFRRPLTHTGQSIAAAAQPFILGLP 161 (480)
T ss_pred HHHHHHHHHHHHHHhhHHHHhhcccchHHHHHHHHHHHHHHHHHhhhccCccccccchhhhhHHhHHHHHHhhhHhhccc
Confidence 455566777888888999999999999999999999999988765544322 11 2 22233333333222222233
Q ss_pred HHhhccccCchhhhhhhHHHHHhhhhhhhHHHHH
Q 039541 434 LVFGTELFTTCVRNSTTSLVRQAVNLGAAFSPVL 467 (521)
Q Consensus 434 ~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~ 467 (521)
.-...--||+++|+++..+..+.+.+|.+++-++
T Consensus 162 skiA~~WF~~~qra~A~~~~v~~n~LGvavg~ll 195 (480)
T KOG2563|consen 162 SKIAAVWFPPDQRAIATVLGVMGNPLGVAVGFLL 195 (480)
T ss_pred cHHHHhhCCcchhhhhhhHHHhcchHHHHHHhhc
Confidence 3344456899999999999888877776655433
No 266
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=97.40 E-value=0.0026 Score=63.15 Aligned_cols=150 Identities=14% Similarity=0.111 Sum_probs=98.0
Q ss_pred HhhccCCCccHHHHHHHHHHHhH--hHHHHHHHHHhhcC-----CchHHHHHHHHHHHHHHHHHhcCCchH--HHHHHHH
Q 039541 349 LLGVGNLSFNIYLSLAFNGLLDI--PAYLLTFILIERWS-----RKSSILTFCILSGTCSAICVAIGDEQE--VLQIGLE 419 (521)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~g~l~dr~g-----~~~~~~~~~~~~~i~~~~~~~~~~~~~--~~~~~~~ 419 (521)
+++.++++.++........+..+ ...++.|.++|-+. ||..++++.++..++.+.+...+.... ....+.+
T Consensus 14 ~~l~~~l~ls~~~~~~~~~~~~lPw~~Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~~~~~s~~~~~~~l 93 (433)
T PF03092_consen 14 PFLKDDLGLSPAQLQRLSSLASLPWSIKPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLPASESSAAIAVVLL 93 (433)
T ss_pred HHHHHHcCCCHHHHHHHHHHHhCchHHhhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhcccccchhhhHHHHH
Confidence 34455577777666666655554 56689999999863 555666677777666666666555221 3445556
Q ss_pred HHHHHHHHHHHHHHHHhhccccC--chhhhhhhHHHHHhhhhhhhHHHHHHHh--hccchhHHHHHHHHHHHHHhHhhhc
Q 039541 420 LASFFSACVAFNVLLVFGTELFT--TCVRNSTTSLVRQAVNLGAAFSPVLISA--GRQNEFLSFGVFGLVVFCFGFFVVF 495 (521)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~~~~~~--~~~r~~~~~~~~~~~~~g~~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 495 (521)
++..++....-.+.-++..|... ++.+|...+.......+|++++..+.|. ...+....|.+.+++.++..+..++
T Consensus 94 ~la~~g~a~~DV~aDa~vvE~~~~~p~~~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~~~~~~f~i~~~~~~l~~~~~~~ 173 (433)
T PF03092_consen 94 FLASFGYAFADVAADALVVELARREPESRGDLQSFVWGVRSVGSLVGSLLSGPLLDSFGPQGVFLISAALPLLMLIVALF 173 (433)
T ss_pred HHHHHHHHHHHHhhhHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhcCCCeEEehHHHHHHHHHHHHHHH
Confidence 66667777777777777777762 2237788888888889999999888875 3334555666666666555544443
Q ss_pred c-cc
Q 039541 496 L-PE 498 (521)
Q Consensus 496 ~-~~ 498 (521)
+ +|
T Consensus 174 ~~~e 177 (433)
T PF03092_consen 174 LLEE 177 (433)
T ss_pred hhhh
Confidence 3 44
No 267
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=97.37 E-value=0.0044 Score=64.32 Aligned_cols=126 Identities=17% Similarity=0.117 Sum_probs=89.9
Q ss_pred hHhHHHHHHHHHhh-cCCchHHHHHHHHHHHHHHHHHhcCCch------HHHHHHHHHHHHHHHHHHHHHHHHhhccccC
Q 039541 370 DIPAYLLTFILIER-WSRKSSILTFCILSGTCSAICVAIGDEQ------EVLQIGLELASFFSACVAFNVLLVFGTELFT 442 (521)
Q Consensus 370 ~~~~~~~~g~l~dr-~g~~~~~~~~~~~~~i~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 442 (521)
.-+..+++|+++|+ +|+++.+.++.++..++..++.+..... ....++.+.+...|.++.-+...+...|.++
T Consensus 36 ~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~~~~~~~~~~~~l~gLaLia~G~GgiKp~vsaf~gdqf~ 115 (654)
T TIGR00926 36 CYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPSSGHPLHDLLDLLGLALIALGTGGIKPCVSAFGGDQFE 115 (654)
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCcccccchHHHHHHHHHHHHHhhccccccCchhhhHhhcC
Confidence 33566788999997 6999999999999888887776542210 1234556666777777777888888888887
Q ss_pred ch---hhhhhhHHHHHhhhhhhhHHHHHHHhhc---------cchhHHHHHHHHHHHHHhHhhhc
Q 039541 443 TC---VRNSTTSLVRQAVNLGAAFSPVLISAGR---------QNEFLSFGVFGLVVFCFGFFVVF 495 (521)
Q Consensus 443 ~~---~r~~~~~~~~~~~~~g~~~~p~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~ 495 (521)
++ .|.....+.....++|+++++.+..+.. .++...|.+.+++.+++.++...
T Consensus 116 ~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~fg~~~~~~~aF~i~~i~m~ia~lvf~~ 180 (654)
T TIGR00926 116 ERQLSLRSRFFSFFYFAINAGSLISTIITPILRGDVGCFGCQDCYPLAFGVPAILMILALIVFMA 180 (654)
T ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHHHHHHHHHHHHHHH
Confidence 54 3667778888888999998888876532 13666777777777776665443
No 268
>PF12832 MFS_1_like: MFS_1 like family
Probab=97.37 E-value=0.00024 Score=50.84 Aligned_cols=53 Identities=19% Similarity=0.227 Sum_probs=45.9
Q ss_pred CcceeeecceeeCCccccchhhHHHHHHHHHHhhhhhhhccccCCCCchHHHHHHHHHH
Q 039541 101 DTTIISDWSLECAGSSILSGLPSSCFFIGCLLGGLALSTLGDSSSLGRKKLLFLSCFAM 159 (521)
Q Consensus 101 ~~~i~~~~~~~~~~~~~~~~~~~s~~~lg~~i~~~~~g~l~dr~~~Grr~~l~~~~~~~ 159 (521)
+|...++.|++..+. |.+.++..+...++.+++|.++|| +|+++..+....+.
T Consensus 23 l~~~~~~~Gl~~~~i----Gil~~i~~~~~~~~~pl~g~laDk--~~~~~~~l~~~~~~ 75 (77)
T PF12832_consen 23 LPLYLKQLGLSPSQI----GILSAIRPLIRFLAPPLWGFLADK--FGKRKVILLGSLFM 75 (77)
T ss_pred hhHhhhhcCCCHHHH----HHHHHHHHHHHHHHHHHHHHHHHH--HCccHHHHHHHHHH
Confidence 566677899999666 999999999999999999999999 99998887766543
No 269
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=97.36 E-value=0.0069 Score=50.08 Aligned_cols=102 Identities=10% Similarity=-0.049 Sum_probs=81.0
Q ss_pred HHHHHhHhHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHHHHHhhccccCch
Q 039541 365 FNGLLDIPAYLLTFILIERWSRKSSILTFCILSGTCSAICVAIGDEQEVLQIGLELASFFSACVAFNVLLVFGTELFTTC 444 (521)
Q Consensus 365 ~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 444 (521)
+.-....++.++.+.+.+++|.|+.++++.+...+-...... +.. +..+...++.|++.+..+...-.++.+...++
T Consensus 45 i~Y~~~~~s~l~~P~iv~~lg~K~sm~lg~~~y~~y~~~~~~-~~~--~~l~~~s~l~G~~~a~lW~aqg~ylt~~s~~~ 121 (156)
T PF05978_consen 45 ILYGSFAISCLFAPSIVNKLGPKWSMILGSLGYAIYIASFFY-PNS--YTLYPASALLGFGAALLWTAQGTYLTSYSTEE 121 (156)
T ss_pred HHHHHHHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHHHHh-hhH--HHHHHHHHHHhhhhHHhhHhhhHHHHHcCCHH
Confidence 333445567788899999999999999998887766554432 222 67788889999999999999999999999999
Q ss_pred hhhhhhHHHHHhhhhhhhHHHHHHH
Q 039541 445 VRNSTTSLVRQAVNLGAAFSPVLIS 469 (521)
Q Consensus 445 ~r~~~~~~~~~~~~~g~~~~p~~~~ 469 (521)
.+++..++.......+.++|.++.-
T Consensus 122 ~~~~~~~ifw~i~~~s~i~G~~~~~ 146 (156)
T PF05978_consen 122 TIGRNTGIFWAIFQSSLIFGNLFLF 146 (156)
T ss_pred HHhhHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999988888877777766553
No 270
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=97.32 E-value=0.00072 Score=65.88 Aligned_cols=104 Identities=10% Similarity=0.146 Sum_probs=85.1
Q ss_pred HHHHHHHHHHHHHHHHHhcc---cc------HHHHHHHHHHhhccchhhHhhhhhheeeeecCc---chhHHHHHHHHHH
Q 039541 150 KLLFLSCFAMSITALATIFA---NN------IWIYSTIRFVAGFFRAPIMTSVIVLLSEMVSKR---WRGQVVIIGFTFF 217 (521)
Q Consensus 150 ~~l~~~~~~~~~~~~~~~~~---~~------~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~---~rg~~~~~~~~~~ 217 (521)
|+++++.+++.+|.++..++ .+ .+.++++-++.++|.|+.=+...++++|-++++ +|.+.+.++..+.
T Consensus 2 ktI~~g~~~~~~G~~ll~l~~~~~~~~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~i 81 (372)
T PF00854_consen 2 KTILLGSIVYLLGHVLLTLSAIPPSLPSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGI 81 (372)
T ss_dssp HHHHHHHHHHHHHHHH--HHHTSSSC------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHH
T ss_pred HhhhHHHHHHHHHHHHhHHHHhcchhhhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHH
Confidence 56788888899998884443 22 368899999999999999999999999999765 4677888899999
Q ss_pred HHHHHHHHHH-HHhhcCCchhHHHHHHHHHHHHHHhh
Q 039541 218 SFGLVSLPAV-AYLSRGSSWKMLYVWTSIPSIVCCII 253 (521)
Q Consensus 218 ~~G~~i~~~i-~~~~~~~~wr~~f~~~~~~~~~~~~~ 253 (521)
++|..+++.+ +++-++.+|.+.|.+.++..++..+.
T Consensus 82 n~G~~~~~~~~~~i~~~~~~~~~f~i~~~~~~~~~~~ 118 (372)
T PF00854_consen 82 NIGSLFSPTLVPYIQQNYGWFLGFGIPAIGMLLALIV 118 (372)
T ss_dssp HHHHHHHHHCCCHHHHCS-HHHHHHHHHHHHHHHHHH
T ss_pred hhhhHhhcccchhhccccchhhhhhHHHHHHHHHHHH
Confidence 9999999888 78888899999999998887777633
No 271
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=97.29 E-value=0.056 Score=53.67 Aligned_cols=142 Identities=13% Similarity=0.012 Sum_probs=86.8
Q ss_pred HHHHHHHHHHHHHHHHHHhHHhhccCCCc-----cHHHHH---HHHHHH-hHhHHHHHHHHHhhcCCchHHHHHHHHHHH
Q 039541 329 RRLLTIMALAFGIGVVYFGLLLGVGNLSF-----NIYLSL---AFNGLL-DIPAYLLTFILIERWSRKSSILTFCILSGT 399 (521)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~---~~~~~~-~~~~~~~~g~l~dr~g~~~~~~~~~~~~~i 399 (521)
+.++...+..++..+.|+.+-..-+.... ++.... ....+. .++..++-+++++|++|+++.-+.......
T Consensus 7 ~k~~~~~l~fF~il~~Y~iLR~lKD~lvv~~~~~gae~i~fLk~~~~lp~~~~~~~ly~~l~~~~~~~~lf~~~~~~F~~ 86 (472)
T TIGR00769 7 KKFLPLFLMFFCILFNYTILRDTKDTLVVTAKGSGAEIIPFLKTWVVVPMAVIFMLIYTKLSNILSKEALFYTVISPFLG 86 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhheeecccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHhHHHHHHHHHH
Confidence 34555556666667777766443332211 111111 111122 233367789999999999987765555555
Q ss_pred HHHHHHhc--CC--c-------------------------hHHHHHHHHHHHHHHHHHHHH-HHHHhhccccCchhhhhh
Q 039541 400 CSAICVAI--GD--E-------------------------QEVLQIGLELASFFSACVAFN-VLLVFGTELFTTCVRNST 449 (521)
Q Consensus 400 ~~~~~~~~--~~--~-------------------------~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~r~~~ 449 (521)
.+.++.+. +. . ..|...+..+..........+ +.|.+++|.+..++-.+-
T Consensus 87 ~f~lF~~vl~p~~~~~~p~~~~~~~~~~~~~~~~~~i~~~~~W~~~~FYv~~elw~~~vvS~lFW~fandi~t~~qakRf 166 (472)
T TIGR00769 87 FFALFAFVIYPLSDLLHPTALADKLLSLLPPGFMGFIAILRIWSFALFYVMAELWGSVVLSLLFWGFANQITTIDEAKRF 166 (472)
T ss_pred HHHHHHHHHhcchhhcCCcHHHHHHHhhcchhhHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHH
Confidence 44444433 11 0 012222333344444445555 889999999999999999
Q ss_pred hHHHHHhhhhhhhHHHHHHHh
Q 039541 450 TSLVRQAVNLGAAFSPVLISA 470 (521)
Q Consensus 450 ~~~~~~~~~~g~~~~p~~~~~ 470 (521)
.++....+++|.++++.+..+
T Consensus 167 y~l~~~ganlg~i~sg~~~~~ 187 (472)
T TIGR00769 167 YALFGLGANVALIFSGRTIKY 187 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999988764
No 272
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=97.28 E-value=0.0039 Score=59.83 Aligned_cols=107 Identities=16% Similarity=0.173 Sum_probs=79.1
Q ss_pred hhhHHHHHHHHHHhhhhhhhccccCCCCchHHHHHHHHHHH-----HHHHHHhccccHHHHHHHHHHhhccchhhHhhhh
Q 039541 120 GLPSSCFFIGCLLGGLALSTLGDSSSLGRKKLLFLSCFAMS-----ITALATIFANNIWIYSTIRFVAGFFRAPIMTSVI 194 (521)
Q Consensus 120 ~~~~s~~~lg~~i~~~~~g~l~dr~~~Grr~~l~~~~~~~~-----~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~ 194 (521)
.+....|.+|-.++.--...+ | + |++.+.+.+-.. +.....-+.++.|.+++.-+..|+..|..++...
T Consensus 284 ~~Y~~~YQ~GVFISRSS~~~~--r--i--r~lwils~LQ~~nl~~~~l~s~~~fipsi~ivf~lif~eGLlGGa~YVNtF 357 (402)
T PF02487_consen 284 RWYQLLYQLGVFISRSSLPFF--R--I--RRLWILSLLQVINLVFLLLQSWYRFIPSIWIVFVLIFYEGLLGGASYVNTF 357 (402)
T ss_pred HHHHHHHHHHHhhhhcceeee--e--h--hhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhHHHHHHH
Confidence 677777777766664432221 3 4 334333332222 2222233458899999999999999999999999
Q ss_pred hheeeeecCcchhHHHHHHHHHHHHHHHHHHHHHHhhc
Q 039541 195 VLLSEMVSKRWRGQVVIIGFTFFSFGLVSLPAVAYLSR 232 (521)
Q Consensus 195 ~~i~~~~~~~~rg~~~~~~~~~~~~G~~i~~~i~~~~~ 232 (521)
..+.|-.++++|..+++....+-++|..++.+++..++
T Consensus 358 ~~I~~~~~~~~REFslg~vsvsds~GI~lAgll~l~le 395 (402)
T PF02487_consen 358 YRISEEVPPEDREFSLGAVSVSDSLGILLAGLLGLPLE 395 (402)
T ss_pred HHHHhcCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999987654
No 273
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=97.26 E-value=0.015 Score=55.49 Aligned_cols=56 Identities=13% Similarity=0.052 Sum_probs=42.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccccCchhhhhhhHHHHHhhhhhhhHHHHHH
Q 039541 413 VLQIGLELASFFSACVAFNVLLVFGTELFTTCVRNSTTSLVRQAVNLGAAFSPVLI 468 (521)
Q Consensus 413 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~ 468 (521)
++......++++..|-..+....++++..|++++..+-.+...+...|-+.|..+.
T Consensus 344 ~~~~~l~~~lglsnGYltsl~m~~aPk~v~~~e~e~aG~~m~~fl~~Gl~~G~~~s 399 (406)
T KOG1479|consen 344 GWFIFLMSLLGLSNGYLTSLIMMYAPKQVKPSEKEAAGNLMVFFLVGGLALGSLLS 399 (406)
T ss_pred hHHHHHHHHHHhccchHhhheehhcCCCCChHHHHHHHHHHHHHHHHHHHHhhHHH
Confidence 67788888899988888889999999999998866666666655555555554443
No 274
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=97.09 E-value=0.00015 Score=68.29 Aligned_cols=107 Identities=12% Similarity=0.030 Sum_probs=3.7
Q ss_pred HHHHHHHHhHhHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHhc--C-C--------chHHHHHHHHHHHHHHHHHHH
Q 039541 362 SLAFNGLLDIPAYLLTFILIERWSRKSSILTFCILSGTCSAICVAI--G-D--------EQEVLQIGLELASFFSACVAF 430 (521)
Q Consensus 362 ~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~i~~~~~~~~--~-~--------~~~~~~~~~~~~~~~~~~~~~ 430 (521)
......++.++|+.+..+..-+..+++.+.+..+.-.+...++.+. . . .+.++.++.++++++..|-..
T Consensus 187 ~fl~Fn~gD~iGR~l~~~~~~~~~~~~~l~~~s~~R~~fiPlf~~cn~~p~~~~~~~~~~~d~~~~i~~~l~g~TNGyl~ 266 (309)
T PF01733_consen 187 LFLLFNLGDFIGRFLASWPRWPGPSPRWLWILSLLRFLFIPLFLLCNVQPRPRYLPVLFNSDAWFIILMLLFGFTNGYLS 266 (309)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHhcchhcceeEecccccccHHHHHHHHHHHHHHHHHHHhhcccccCCCcccchHHHHHHHHHHHHccchhh
Confidence 3455678888999888775322113333333333222222222222 1 0 011566778888899988888
Q ss_pred HHHHHhhccccCchhhhhhhHHHHHhhhhhhhHHHHHH
Q 039541 431 NVLLVFGTELFTTCVRNSTTSLVRQAVNLGAAFSPVLI 468 (521)
Q Consensus 431 ~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~ 468 (521)
+....+.++..++++|..+-.+......+|-.+|..+.
T Consensus 267 tl~m~~~p~~v~~~e~e~aG~~~~~~L~~Gl~~Gs~ls 304 (309)
T PF01733_consen 267 TLAMMYAPKSVSPEERELAGSVMSFFLSFGLFIGSVLS 304 (309)
T ss_dssp HHHH----------------------------------
T ss_pred hceeeeCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999998888888777777777766665543
No 275
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=96.94 E-value=0.011 Score=53.44 Aligned_cols=135 Identities=11% Similarity=-0.021 Sum_probs=84.6
Q ss_pred hhhHHHHHHHHHHhhhhhhhccccCCCCchHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHhhccchhhHhhhhhheee
Q 039541 120 GLPSSCFFIGCLLGGLALSTLGDSSSLGRKKLLFLSCFAMSITALATIFANNIWIYSTIRFVAGFFRAPIMTSVIVLLSE 199 (521)
Q Consensus 120 ~~~~s~~~lg~~i~~~~~g~l~dr~~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~ 199 (521)
|.+.-+-.+...+-.+.+....||.+||.|. .+..++.+.+.++.+++++.++-+++-.+..++.|.....-.++-+.
T Consensus 65 g~VLLaDilPsL~iKl~~Pff~~rfpf~~Ri--~~~v~~sa~s~~lVafs~s~~~sL~GV~~aSissGlGEiTFL~lss~ 142 (409)
T KOG3880|consen 65 GAVLLADILPSLAIKLTAPFFIHRFPFGFRI--ALVVLLSALSFFLVAFSNSVPMSLLGVVFASISSGLGEITFLALSSR 142 (409)
T ss_pred chhhhhhhhHHHHHHHhchhhhhhcccchHH--HHHHHHHhcceEEEEeccchhHHHhhhhhhhhcCCcceeehhhhhcc
Confidence 4444444566666667777788884566665 44556778889999999999999999999888888665555444433
Q ss_pred eecCcchhHHHHHHHHHHHHHHHHHHHH-HHhhc--CCchhHHHHHHHHHHHHHHhhhceeeecc
Q 039541 200 MVSKRWRGQVVIIGFTFFSFGLVSLPAV-AYLSR--GSSWKMLYVWTSIPSIVCCIIIYPFISES 261 (521)
Q Consensus 200 ~~~~~~rg~~~~~~~~~~~~G~~i~~~i-~~~~~--~~~wr~~f~~~~~~~~~~~~~~~~~~~es 261 (521)
+ + ....+.+..+.+.+.++|..- +.+.+ +.+-|...++...+-++.++..++.++++
T Consensus 143 Y-~----~~~i~~WSSGTGgAGliGa~SYa~lT~~~~~spk~Tlli~l~lP~lfa~~yf~lL~~p 202 (409)
T KOG3880|consen 143 Y-P----SIVIAGWSSGTGGAGLIGASSYAFLTSWANLSPKSTLLIMLFLPALFAFAYFFLLKSP 202 (409)
T ss_pred C-C----CceeccccCCCCcchhhhhhHHHHHhhhcCCChhhHHHHHHHHHHHHHHHHHheeCCC
Confidence 2 2 223334444555555555444 33333 34567777777766666663555555543
No 276
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=96.90 E-value=0.014 Score=57.10 Aligned_cols=107 Identities=21% Similarity=0.203 Sum_probs=83.0
Q ss_pred hhhHHHHHHHHHHhhhhhhhccccC-CCCchHHHHHHHHHHHHHHHHHhcc------------------ccHHHHHHHHH
Q 039541 120 GLPSSCFFIGCLLGGLALSTLGDSS-SLGRKKLLFLSCFAMSITALATIFA------------------NNIWIYSTIRF 180 (521)
Q Consensus 120 ~~~~s~~~lg~~i~~~~~g~l~dr~-~~Grr~~l~~~~~~~~~~~~~~~~~------------------~~~~~l~~~r~ 180 (521)
++..-...+|..++..+.+.+.+|. ++||++.+.++..+..++.++.-.. +++...++.-+
T Consensus 282 ai~~~~~g~g~v~~g~~~~~l~~rir~fg~~~~~~~~~~~~~~~~~li~l~~p~dap~~~t~~~~~~~~~~~~~~~ii~~ 361 (461)
T KOG3098|consen 282 AIYSIGIGLGEVIGGLDFSILSKRIRGFGRKPTVLIGIIIHLIGFLLIHLSFPNDAPLRPTDSPPLLFTPSYYLALIIGF 361 (461)
T ss_pred HHHHHHHhHHHHHHHHHHHHHhhhhhhcccCcchhHHHHHHHHHHHHHhccccccCCCCCCcccccccccchhHHHHHHH
Confidence 4444444455555666677777765 6999999999999998888887553 24667788889
Q ss_pred HhhccchhhHhhhhhheeeeecCcchhHHHHHHHHHHHHHHHHHHHH
Q 039541 181 VAGFFRAPIMTSVIVLLSEMVSKRWRGQVVIIGFTFFSFGLVSLPAV 227 (521)
Q Consensus 181 l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~i~~~i 227 (521)
+.|++-+......+.++.+.. +++|..+.++...-..++..++...
T Consensus 362 l~G~~D~~~~t~~~~ii~~~~-~~~~~~~fsi~kfyq~~~s~v~~f~ 407 (461)
T KOG3098|consen 362 LLGFGDACFNTQRYVIIALLY-PDDRAQAFSLFKFYQSVASCVAFFF 407 (461)
T ss_pred HHhhHHHHHHHHHHHHHHHHh-cCchHHHHHHHHHHHHHHHHHHhhh
Confidence 999999999999999999999 5889999998888888777765544
No 277
>PF12832 MFS_1_like: MFS_1 like family
Probab=96.83 E-value=0.012 Score=42.06 Aligned_cols=63 Identities=17% Similarity=0.142 Sum_probs=46.0
Q ss_pred HHHHHHHHHHHHhHHhhccCCCccHHHHHHHHH---HHhHhHHHHHHHHHhhcCCchHHHHHHHHH
Q 039541 335 MALAFGIGVVYFGLLLGVGNLSFNIYLSLAFNG---LLDIPAYLLTFILIERWSRKSSILTFCILS 397 (521)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~ 397 (521)
++.+.+.+..+-+.+.++++.|.+....+.+.+ +..+++.++.|+++||+++++.......++
T Consensus 10 f~~f~~~g~~~Pfl~~~~~~~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~~l~~~~~~ 75 (77)
T PF12832_consen 10 FFYFAALGCLYPFLPLYLKQLGLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRKVILLGSLFM 75 (77)
T ss_pred HHHHHHHHHHHhhhhHhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHHHHHHHHHH
Confidence 334444455555678888888988877765554 566789999999999999998877665543
No 278
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=96.78 E-value=0.0085 Score=58.60 Aligned_cols=121 Identities=12% Similarity=-0.038 Sum_probs=91.6
Q ss_pred eecceeeCCccccchhhHHHHHHHHHHhhhhhhhccccCCCCchHHHHHHHHHHHHHHHHHh------ccc----cHHHH
Q 039541 106 SDWSLECAGSSILSGLPSSCFFIGCLLGGLALSTLGDSSSLGRKKLLFLSCFAMSITALATI------FAN----NIWIY 175 (521)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~s~~~lg~~i~~~~~g~l~dr~~~Grr~~l~~~~~~~~~~~~~~~------~~~----~~~~l 175 (521)
..-|+++.. +|..-+...+....+.+...++.+| +|..+.=++++.....+..++. -++ +...+
T Consensus 286 ~~~G~s~~~----igi~R~~gav~Gl~gT~~~p~l~~r--iGlvr~G~~~l~~q~~~L~~~v~~~~~~~~~~~~~s~~~l 359 (432)
T PF06963_consen 286 KSQGYSPSV----IGIFRGLGAVFGLLGTWVYPWLMKR--IGLVRAGLWSLWWQWVCLALCVVSFWAPGSPFSSISAYLL 359 (432)
T ss_pred HHCCCCHHH----HHHHHHHHHHHHHHHHHHHHHHHHH--hcchhhHHHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHH
Confidence 344788744 4999999999999999999999999 9998887777665444433332 212 34455
Q ss_pred HHHHHHhhccchhhHhhhhhheeeeecCcchhHHHHHHHHHHHHHHHHHHHHHHhhc
Q 039541 176 STIRFVAGFFRAPIMTSVIVLLSEMVSKRWRGQVVIIGFTFFSFGLVSLPAVAYLSR 232 (521)
Q Consensus 176 ~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~i~~~i~~~~~ 232 (521)
+.+-.+.-+|.=+......-++.|..|+++||...|.-....++-.++...++.+.+
T Consensus 360 ~~gi~~SR~GLW~fDL~~~qi~Qe~V~~~~Rg~v~gvq~sl~~lf~ll~~~~~ii~~ 416 (432)
T PF06963_consen 360 LGGIALSRIGLWSFDLAVTQIMQENVPESERGAVSGVQNSLQSLFELLSFVLTIIFP 416 (432)
T ss_pred HHHHHHHHHHHHhhhHHHHHhhcccCCHHHhhHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 555566666666677788889999999999999999999999988888777766553
No 279
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=96.76 E-value=0.024 Score=50.40 Aligned_cols=48 Identities=8% Similarity=0.155 Sum_probs=33.3
Q ss_pred cchhHHHHHHHHHHHHHHHHH--HHH-H-Hh--hcCCchhHHHHHHHHHHHHHH
Q 039541 204 RWRGQVVIIGFTFFSFGLVSL--PAV-A-YL--SRGSSWKMLYVWTSIPSIVCC 251 (521)
Q Consensus 204 ~~rg~~~~~~~~~~~~G~~i~--~~i-~-~~--~~~~~wr~~f~~~~~~~~~~~ 251 (521)
|+|+..+.+...+.++|.++. |.+ . .. ...-+|++.+.+.+++.++-+
T Consensus 2 k~K~~~s~~n~~gf~iG~ii~~ipF~~~~~~~~~~~~~W~~I~si~~lL~~IpL 55 (267)
T PF07672_consen 2 KKKSILSQFNPWGFNIGTIIVNIPFLISSSVVIALTNNWQWILSIFILLIFIPL 55 (267)
T ss_pred CccceeeeeccccchhhHHHHHhhHHhcchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 567777777888888888875 333 2 11 112369999998888877766
No 280
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=96.55 E-value=0.08 Score=49.47 Aligned_cols=110 Identities=22% Similarity=0.117 Sum_probs=76.1
Q ss_pred HHHHHHHHHhHhHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHHHHHhhccc
Q 039541 361 LSLAFNGLLDIPAYLLTFILIERWSRKSSILTFCILSGTCSAICVAIGDEQEVLQIGLELASFFSACVAFNVLLVFGTEL 440 (521)
Q Consensus 361 ~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 440 (521)
.......+...++.++.|.+.||+|||+.+..+.....++.+...+......+...+.....+++.+...+....+..|.
T Consensus 43 ~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 122 (338)
T COG0477 43 LLLSAFFLGYAIGSLLAGPLGDRYGRRKVLIIGLLLFLLGTLLLALAPNVGLALLLILRLLQGLGGGGLLPVASALLSEW 122 (338)
T ss_pred HHHHHHHHHHHHHhhhhhhccccccchHHHHHHHHHHHHHHHHHHhCccchHHHHHHHHHHHHhhhHHHHHHHHHHHHHh
Confidence 33344445666667899999999999977777766544444444444441224445555557777788888999999999
Q ss_pred cCc-hhhhhhhHHHHH-hhhhhhhHHHHHHHh
Q 039541 441 FTT-CVRNSTTSLVRQ-AVNLGAAFSPVLISA 470 (521)
Q Consensus 441 ~~~-~~r~~~~~~~~~-~~~~g~~~~p~~~~~ 470 (521)
.|+ +.|+...+.... ...+|..++|.+.+.
T Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (338)
T COG0477 123 FPEATERGLAVGLVTLGAGALGLALGPLLAGL 154 (338)
T ss_pred cCchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 998 677888888777 567777788866554
No 281
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=96.23 E-value=0.26 Score=47.74 Aligned_cols=125 Identities=14% Similarity=0.045 Sum_probs=80.2
Q ss_pred HhHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHHHHHhhccccCchhhhhhh
Q 039541 371 IPAYLLTFILIERWSRKSSILTFCILSGTCSAICVAIGDEQEVLQIGLELASFFSACVAFNVLLVFGTELFTTCVRNSTT 450 (521)
Q Consensus 371 ~~~~~~~g~l~dr~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 450 (521)
++..+....+.|.++.|.+++++.+...+...++.+.... ...-+.-++.|..... -...++++-...|+++--++.
T Consensus 55 l~~l~~vflltd~l~Ykpviil~~~~~i~t~~lll~~~sv--~~mq~~q~~yg~~~a~-evay~sYiys~v~~~~yq~vt 131 (412)
T PF01770_consen 55 LAFLLPVFLLTDYLRYKPVIILQALSYIITWLLLLFGTSV--LAMQLMQFFYGLATAA-EVAYYSYIYSVVDKEHYQKVT 131 (412)
T ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHCcH--HHHHHHHHHHHHHHHH-HHHHHHHheeecCHHHHHHHH
Confidence 3344567788999999999998888877777776665443 4455555666555433 456667777777888877888
Q ss_pred HHHHHhhhhhhh----HHHHHHHhhccchhHHHHHHHHHHHHHhHhhhcccc
Q 039541 451 SLVRQAVNLGAA----FSPVLISAGRQNEFLSFGVFGLVVFCFGFFVVFLPE 498 (521)
Q Consensus 451 ~~~~~~~~~g~~----~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 498 (521)
+.......+|.+ +|..+......++.....+......++.+..+++|.
T Consensus 132 s~~raa~l~g~~~s~~lgQllvs~~~~sy~~L~~isl~~~~~a~~~~~fLP~ 183 (412)
T PF01770_consen 132 SYTRAATLVGRFISSLLGQLLVSFGGVSYFQLNYISLASVSLALLIALFLPM 183 (412)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 777776655544 555555544444555544444444555555566664
No 282
>PRK03612 spermidine synthase; Provisional
Probab=96.05 E-value=0.075 Score=53.90 Aligned_cols=131 Identities=10% Similarity=0.057 Sum_probs=76.6
Q ss_pred ccchhhHHHHHHHHHHhhhhhhhccccCCCCchHHHHHHHHHHH---HHHHHH----hccccH-HHHHHHHHHhhccchh
Q 039541 117 ILSGLPSSCFFIGCLLGGLALSTLGDSSSLGRKKLLFLSCFAMS---ITALAT----IFANNI-WIYSTIRFVAGFFRAP 188 (521)
Q Consensus 117 ~~~~~~~s~~~lg~~i~~~~~g~l~dr~~~Grr~~l~~~~~~~~---~~~~~~----~~~~~~-~~l~~~r~l~G~~~g~ 188 (521)
...+.+.+++.+|.++|+.+.+++.++ --++ ...+-+.+.. ++..+. ++...+ ..++..-++.|+..|+
T Consensus 50 ~~~~~ii~~fl~glalGs~l~~~~~~~--~~~~-~~~~e~~i~l~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~l~G~ 126 (521)
T PRK03612 50 TQFSTVIGLMLFAMGVGALLSKYLLRD--AAAG-FVAVELLLALLGGLSALILYAAFAFQGLSRLLLYVLVLLIGLLIGM 126 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhh--HHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444999999999999999999887744 3333 3222221111 111111 111111 2233445667888888
Q ss_pred hHhhhhhheeeeecCcchhHHHHHHHHHHHHHHHHHHHH-HH-hhcCCchhHHHHHHHHHHHHHH
Q 039541 189 IMTSVIVLLSEMVSKRWRGQVVIIGFTFFSFGLVSLPAV-AY-LSRGSSWKMLYVWTSIPSIVCC 251 (521)
Q Consensus 189 ~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~i~~~i-~~-~~~~~~wr~~f~~~~~~~~~~~ 251 (521)
..|....+..+... ++-|+..|-......+|.++|.++ ++ +++..|-....++.+.+.++..
T Consensus 127 ~~Pl~~~~~~~~~~-~~~g~~~g~ly~~ntlGa~~G~l~~~~vLlp~lG~~~t~~~~a~l~~~~a 190 (521)
T PRK03612 127 EIPLLMRILQRIRD-QHLGHNVATVLAADYLGALVGGLAFPFLLLPRLGLIRTAALTGSLNLLAA 190 (521)
T ss_pred HHHHHHHHHHhccc-cchhhhhhhhHhHHhHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHH
Confidence 88887776654322 234666777888888888888887 43 3445665544445555544444
No 283
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=95.74 E-value=0.61 Score=43.15 Aligned_cols=100 Identities=18% Similarity=0.198 Sum_probs=70.9
Q ss_pred HHHHHHHHhhhhhhhccccCCCCchHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHhhccchhhHhhhhhheeeeecC-
Q 039541 125 CFFIGCLLGGLALSTLGDSSSLGRKKLLFLSCFAMSITALATIFANNIWIYSTIRFVAGFFRAPIMTSVIVLLSEMVSK- 203 (521)
Q Consensus 125 ~~~lg~~i~~~~~g~l~dr~~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~- 203 (521)
..++..+.+.++.+.+..+ +|-|.++.++...+...-. .-+-+.+..++-.-.+.|++.+..+..--+|+++.-..
T Consensus 66 ~~y~~l~~s~m~~~~~Ir~--~g~K~tm~lav~~Y~lyiA-~Nl~pr~~tlVPa~~~~G~aa~p~W~SkgtYlT~~g~~y 142 (390)
T KOG3097|consen 66 ALYLSLIDSSMFMPLLIRF--LGTKWTMVLAVFPYALYIA-ANLEPRYETLVPAGLVLGMAAGPIWASKGTYLTPMGQNY 142 (390)
T ss_pred hhhHHHHHHHHHHHHHHHH--HhhHHHHHHHHHHHHHHHH-hhcchhHHhhccHHHhhccccccccccCcceecHHHHHH
Confidence 3455666677777789999 9999999998887765332 22446788999999999999999999998888876643
Q ss_pred -cch-------------hHHHHHHHHHHHHHHHHHHHH
Q 039541 204 -RWR-------------GQVVIIGFTFFSFGLVSLPAV 227 (521)
Q Consensus 204 -~~r-------------g~~~~~~~~~~~~G~~i~~~i 227 (521)
++| |....+++...-.|.+++..+
T Consensus 143 a~~~~~q~~~~~~~~ffg~Ffii~~~~qv~gn~issli 180 (390)
T KOG3097|consen 143 ANQRGEQAGDGMKVRFFGEFFIIFQCAQVWGNLISSLI 180 (390)
T ss_pred HHhhhhhccCceeeeehhHHHHHHHHHHHHHHHHHHHH
Confidence 334 233445555555565555444
No 284
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=95.46 E-value=0.068 Score=52.08 Aligned_cols=109 Identities=17% Similarity=0.075 Sum_probs=79.2
Q ss_pred hHHHHHHHHHHHHHHHHHh--cCCch-----HHHHHHHHHHHHHHHHHHHHHHHHhhccccCch---hhhhhhHHHHHhh
Q 039541 388 SSILTFCILSGTCSAICVA--IGDEQ-----EVLQIGLELASFFSACVAFNVLLVFGTELFTTC---VRNSTTSLVRQAV 457 (521)
Q Consensus 388 ~~~~~~~~~~~i~~~~~~~--~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~r~~~~~~~~~~~ 457 (521)
|.+.++.++..++.+++.+ .+... ...+++.+.+.++|.|+.=+....+..|.++++ .|.......+...
T Consensus 2 ktI~~g~~~~~~G~~ll~l~~~~~~~~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~i 81 (372)
T PF00854_consen 2 KTILLGSIVYLLGHVLLTLSAIPPSLPSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGI 81 (372)
T ss_dssp HHHHHHHHHHHHHHHH--HHHTSSSC------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHH
T ss_pred HhhhHHHHHHHHHHHHhHHHHhcchhhhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHH
Confidence 4567777777777776333 22221 146677788889999999999999999999876 4566677778888
Q ss_pred hhhhhHHHHHHHhh--ccchhHHHHHHHHHHHHHhHhhhcc
Q 039541 458 NLGAAFSPVLISAG--RQNEFLSFGVFGLVVFCFGFFVVFL 496 (521)
Q Consensus 458 ~~g~~~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 496 (521)
++|+.+++.+.++. ..++...|.+.++..+++.+.++.-
T Consensus 82 n~G~~~~~~~~~~i~~~~~~~~~f~i~~~~~~~~~~~f~~~ 122 (372)
T PF00854_consen 82 NIGSLFSPTLVPYIQQNYGWFLGFGIPAIGMLLALIVFLSG 122 (372)
T ss_dssp HHHHHHHHHCCCHHHHCS-HHHHHHHHHHHHHHHHHHHHCC
T ss_pred hhhhHhhcccchhhccccchhhhhhHHHHHHHHHHHHHHhC
Confidence 99999999888774 3678888888888888777665544
No 285
>PRK03612 spermidine synthase; Provisional
Probab=95.37 E-value=0.91 Score=46.19 Aligned_cols=54 Identities=15% Similarity=0.017 Sum_probs=35.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhccccCchhhhhhhHHHHHhhhhhhhHHHHHHHh
Q 039541 416 IGLELASFFSACVAFNVLLVFGTELFTTCVRNSTTSLVRQAVNLGAAFSPVLISA 470 (521)
Q Consensus 416 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~ 470 (521)
....++.++..|..+|....+..+....+ -+...|-.+....+|+++|+++.++
T Consensus 114 ~~~~~~~~~l~G~~~Pl~~~~~~~~~~~~-~g~~~g~ly~~ntlGa~~G~l~~~~ 167 (521)
T PRK03612 114 YVLVLLIGLLIGMEIPLLMRILQRIRDQH-LGHNVATVLAADYLGALVGGLAFPF 167 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccccc-hhhhhhhhHhHHhHHHHHHHHHHHH
Confidence 34445566777777777666665433322 2566777778888888888887764
No 286
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=95.27 E-value=3.7 Score=41.25 Aligned_cols=101 Identities=19% Similarity=0.091 Sum_probs=63.4
Q ss_pred hHhHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHhc--CCc------h---------------------HHHHHHHHH
Q 039541 370 DIPAYLLTFILIERWSRKSSILTFCILSGTCSAICVAI--GDE------Q---------------------EVLQIGLEL 420 (521)
Q Consensus 370 ~~~~~~~~g~l~dr~g~~~~~~~~~~~~~i~~~~~~~~--~~~------~---------------------~~~~~~~~~ 420 (521)
.++...+-.++.+++++.++.-+..........++++. +.. . .|...+..+
T Consensus 72 a~~f~~~y~kl~n~~s~~~lFy~~~~~F~~fF~~f~~vlyP~~~~lhp~~~~~~~~~~~~~~~~~~i~~~~~Wt~slfYv 151 (491)
T PF03219_consen 72 AILFTILYSKLSNRLSREKLFYIIIIPFLGFFALFAFVLYPNRDILHPDAFADKLLAILPPGFKGFIAMFRNWTFSLFYV 151 (491)
T ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhhchhhcCCCHHHHHhhhhccchHHHHHHHHHHHHHHHHHH
Confidence 34455667889999999887665544444443333332 110 0 011222222
Q ss_pred HHHHHHHHHHH-HHHHhhccccCchhhhhhhHHHHHhhhhhhhHHHHHHHh
Q 039541 421 ASFFSACVAFN-VLLVFGTELFTTCVRNSTTSLVRQAVNLGAAFSPVLISA 470 (521)
Q Consensus 421 ~~~~~~~~~~~-~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~ 470 (521)
..-.......+ ..|.+++|..+.++..+-.++.....++|.+++..+..+
T Consensus 152 ~aElwgsvvlSlLFW~fAN~itt~~eAKRfYpl~g~ganigli~sG~~~~~ 202 (491)
T PF03219_consen 152 MAELWGSVVLSLLFWGFANEITTVEEAKRFYPLFGLGANIGLIFSGQLTSY 202 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22222233344 579999999999999999999999999999888777653
No 287
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=94.90 E-value=0.064 Score=51.75 Aligned_cols=123 Identities=14% Similarity=-0.024 Sum_probs=75.5
Q ss_pred HHhhccCCCccHHHHHHH---HHHHhHhHHHHHHHHHhh----cCCchHHHH-HHHHHHHHHHHHHhcCCchH-------
Q 039541 348 LLLGVGNLSFNIYLSLAF---NGLLDIPAYLLTFILIER----WSRKSSILT-FCILSGTCSAICVAIGDEQE------- 412 (521)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~g~l~dr----~g~~~~~~~-~~~~~~i~~~~~~~~~~~~~------- 412 (521)
.+.+++..|.+......+ .-+.+++..++.|..+|| +||||..+. +.....++++++.+......
T Consensus 55 ~tPyl~~lGvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI~~~s~~i~~~l~Lig~aaDig~~lgd~~~ 134 (498)
T KOG0637|consen 55 LTPYLQSLGVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFILAGSLLIAVSLFLIGYAADIGLLLGDNER 134 (498)
T ss_pred ccHHHHHcCCCcccccccccccccccceecccccccccccccccccccchHHHhhHHHHHHHhhhhhHhhhhHHhcCCcc
Confidence 344455555543333322 224566677788899996 788776554 44555566655554422110
Q ss_pred --------HHHHHHHHHHHHHHHHHHHHHHHhhccccCchhhhh-hhHHHHHhhhhhhhHHHHHHHh
Q 039541 413 --------VLQIGLELASFFSACVAFNVLLVFGTELFTTCVRNS-TTSLVRQAVNLGAAFSPVLISA 470 (521)
Q Consensus 413 --------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~-~~~~~~~~~~~g~~~~p~~~~~ 470 (521)
...++.+.+.-+.........-++..|+..++.+.+ +++....+..+|+.+|-.+.++
T Consensus 135 ~~~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~~~~Ans~f~~f~avGnvLGY~~g~y 201 (498)
T KOG0637|consen 135 KPVKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDAKKTRANSVFSFFMAVGNVLGYALGSY 201 (498)
T ss_pred cccchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChhhhhccchhHHHHHHhcceeeeecccc
Confidence 122333344444555666788899999988877777 8988888888888877665544
No 288
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=94.75 E-value=0.005 Score=62.59 Aligned_cols=152 Identities=15% Similarity=0.047 Sum_probs=2.5
Q ss_pred HHhhccCCCccHHHHHHH---HHHHhHhHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHhcCC----------c----
Q 039541 348 LLLGVGNLSFNIYLSLAF---NGLLDIPAYLLTFILIERWSRKSSILTFCILSGTCSAICVAIGD----------E---- 410 (521)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~i~~~~~~~~~~----------~---- 410 (521)
++.+-+.++.+....+.+ .-++.++..++..++.+|..|-|.+..+.++++++.+++.+-.- .
T Consensus 26 lttiErRF~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~hrprwig~g~~~~~~g~~l~~lPhf~~~~y~~~~~~~~~~ 105 (539)
T PF03137_consen 26 LTTIERRFGLSSSQSGLISSSYDIGSLVVVLFVSYFGGRGHRPRWIGIGALLMGLGSLLFALPHFLSGPYSYEEASNSNG 105 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcceeeecHHHHHHHHHHHhccHhhcCCCcccccccccc
Confidence 344444555554444433 34666667777777778877778888999999988877765310 0
Q ss_pred ----------------------------h------HHHHHHHHHHHHHHHHHHHHHHHHhhccccCchhhhhhhHHHHHh
Q 039541 411 ----------------------------Q------EVLQIGLELASFFSACVAFNVLLVFGTELFTTCVRNSTTSLVRQA 456 (521)
Q Consensus 411 ----------------------------~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 456 (521)
. ...+++..++.|++....+++..+|+-|..+++..+...|+....
T Consensus 106 ~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tYiDDnv~~~~splYiGi~~~~ 185 (539)
T PF03137_consen 106 NSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITYIDDNVSKKNSPLYIGILYAM 185 (539)
T ss_dssp ----------------------------------------------SSS-------------------------------
T ss_pred ccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceeeeeccccccccCccchhhhhHH
Confidence 0 024456677788888888999999999999999989999999888
Q ss_pred hhhhhhHHHHHHHh--------h--c--------------cchhHHHHHHHHHHHHHhHhhhccccC
Q 039541 457 VNLGAAFSPVLISA--------G--R--------------QNEFLSFGVFGLVVFCFGFFVVFLPET 499 (521)
Q Consensus 457 ~~~g~~~~p~~~~~--------~--~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 499 (521)
..+|-++|-.+.+. . . ..++..|++.+.+.++..+.++.+|+.
T Consensus 186 ~~lGPa~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~dp~WvGAWWLGfli~g~~~~l~aipl~~FPk~ 252 (539)
T PF03137_consen 186 SILGPALGFLLGSFCLRIYVDFPKVPPDGVGITPSDPRWVGAWWLGFLICGILLFLSAIPLFFFPKK 252 (539)
T ss_dssp -------------------------------------------------------------------
T ss_pred hhccHHHHHHHHHHHHhceeCCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHcCCcc
Confidence 87776655444431 0 0 125556777777777777666666643
No 289
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=93.77 E-value=0.21 Score=51.79 Aligned_cols=135 Identities=16% Similarity=0.074 Sum_probs=97.2
Q ss_pred HHhHhHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHhcC-------------------C-------------------
Q 039541 368 LLDIPAYLLTFILIERWSRKSSILTFCILSGTCSAICVAIG-------------------D------------------- 409 (521)
Q Consensus 368 ~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~i~~~~~~~~~-------------------~------------------- 409 (521)
++..+...+..+...|.-|-+++.++.++++++.++..+.. .
T Consensus 143 ig~~l~i~fVsYfG~r~HrPr~Ig~G~~~m~lgsll~alPHf~~~~y~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~ 222 (735)
T KOG3626|consen 143 IGNLLLIIFVSYFGSRGHRPRWIGIGLVLMGLGSLLFALPHFFSGPYEYELEVIKQSVENPSSSLSFCCCNKSTNLCRPS 222 (735)
T ss_pred cchhhhhHhHHHhccccCccceeeechhHHHHHHHHHhChHHhcCcchhhhhhhhccccCCccccchhhccCCccccCCC
Confidence 55556666677777787788888889999988888776530 0
Q ss_pred --------c-h--H-HHHHHHHHHHHHHHHHHHHHHHHhhccccCchhhhhhhHHHHHhhhhhhhHHHHHHHh-----hc
Q 039541 410 --------E-Q--E-VLQIGLELASFFSACVAFNVLLVFGTELFTTCVRNSTTSLVRQAVNLGAAFSPVLISA-----GR 472 (521)
Q Consensus 410 --------~-~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~-----~~ 472 (521)
. + . ..+.+..++.|++....+++..+|+-|...++.-+...|+..++..+|-++|-++.++ .+
T Consensus 223 ~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi~tlGisYiDDnvk~~~SplYlgi~~~~~~lGPaiGfllgS~~l~lYvD 302 (735)
T KOG3626|consen 223 PENSKREKESTSYPFLLFFLGQLLLGIGATPIFTLGISYIDDNVKKKNSPLYLGILYSMAILGPAIGFLLGSFCLKLYVD 302 (735)
T ss_pred CCcccccccCCchhHHHHHHHHHHhhcCCCCCccCCCccccccccccCCcHHHHHHHHHHHhhhHHHHHHHHHHHHeeec
Confidence 0 0 1 1344556666677677788999999999999998999999998887777766666542 00
Q ss_pred ----------------cchhHHHHHHHHHHHHHhHhhhccccCCCC
Q 039541 473 ----------------QNEFLSFGVFGLVVFCFGFFVVFLPETIGV 502 (521)
Q Consensus 473 ----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 502 (521)
..|+..|++.+.+.++..+.++++|+...+
T Consensus 303 ~~~~~~~it~~DPrWIGAWWlGFLi~g~~~~~~a~p~f~fPk~lp~ 348 (735)
T KOG3626|consen 303 FGLSPIGITPTDPRWIGAWWLGFLICGALLLFSAVPLFFFPKELPK 348 (735)
T ss_pred cccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHhCcccCcc
Confidence 135667888888888888888888865544
No 290
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=93.56 E-value=3 Score=41.42 Aligned_cols=111 Identities=15% Similarity=0.032 Sum_probs=78.1
Q ss_pred cchhhHHHHHHHHHHhhhhhhhccccCCCCch--HHHHHH--HHHHHHHHHHHhc---------cccHHHHHHHHHHhhc
Q 039541 118 LSGLPSSCFFIGCLLGGLALSTLGDSSSLGRK--KLLFLS--CFAMSITALATIF---------ANNIWIYSTIRFVAGF 184 (521)
Q Consensus 118 ~~~~~~s~~~lg~~i~~~~~g~l~dr~~~Grr--~~l~~~--~~~~~~~~~~~~~---------~~~~~~l~~~r~l~G~ 184 (521)
..-++...|.+|-.+|..+..+..- -++| .+++.. =+++....++|.. -++-+..++.-++.|+
T Consensus 308 ~~~i~~~~fNvgD~vGR~~~~~~~~---p~~~~~~l~i~s~~R~iFIPlf~lcn~~~~~~~p~~~~~d~~~~~~~~l~gl 384 (437)
T TIGR00939 308 YPIICFLLFNLFDWLGRSLTSKFMW---PDEDSRWLPILSFLRVLFIPLFLLCNYPQRSRLPVFFPGDAYFIILMLLFGF 384 (437)
T ss_pred HHHHHHHHHHHHHHHHhhhhheeEe---eCCCccchHHHHHHHHHHHHHHHHhcCCccccCCeeecccHHHHHHHHHHHH
Confidence 3356677778888888875544321 1222 333322 2233333334432 2466677778999999
Q ss_pred cchhhHhhhhhheeeeecCcchhHHHHHHHHHHHHHHHHHHHHHHhh
Q 039541 185 FRAPIMTSVIVLLSEMVSKRWRGQVVIIGFTFFSFGLVSLPAVAYLS 231 (521)
Q Consensus 185 ~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~i~~~i~~~~ 231 (521)
..|-.......+..+..++++|..+..+...+..+|..+|..++++.
T Consensus 385 tnGy~~s~~m~~~p~~v~~~e~e~aG~~~~~~l~~Gl~~Gs~l~~~~ 431 (437)
T TIGR00939 385 SNGYLGSLSMCLAPRQVDPHEREVAGALMVIFLLVGLALGAVLSFLF 431 (437)
T ss_pred hhhHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999998887654
No 291
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=92.92 E-value=11 Score=37.49 Aligned_cols=142 Identities=13% Similarity=0.001 Sum_probs=80.8
Q ss_pred HHHHHHHHHHHHHHHHHHhHHhhccCC---CccHHHHHHHHH---H-HhHhHHHHHHHHHhhcCCchHHHHHHHHHHHHH
Q 039541 329 RRLLTIMALAFGIGVVYFGLLLGVGNL---SFNIYLSLAFNG---L-LDIPAYLLTFILIERWSRKSSILTFCILSGTCS 401 (521)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~---~-~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~i~~ 401 (521)
..++-..+..++..+.++.+-..-+.. ..++.....+-. + ++++..++-.++.+++.+.++............
T Consensus 27 ~kflpl~Ll~f~I~~ny~~lR~lKDslvv~~~gae~I~FlK~~~vlP~avif~~iy~kl~~~lt~~~vF~~~~~~F~~fF 106 (509)
T COG3202 27 KKFLPLALLFFCILFNYNLLRSLKDSLVVTRQGAESISFLKTWGVLPSAVIFTIIYQKLLNILTREKVFYIILGFFLGFF 106 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhheEeecCcchhhHHHHHHHhchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHH
Confidence 444555555556666655543322211 122222222211 2 344556677888888888887655554444444
Q ss_pred HHHHhcCC--------------------c-h---------HHHHHHHHHHHHHHHHHHHH-HHHHhhccccCchhhhhhh
Q 039541 402 AICVAIGD--------------------E-Q---------EVLQIGLELASFFSACVAFN-VLLVFGTELFTTCVRNSTT 450 (521)
Q Consensus 402 ~~~~~~~~--------------------~-~---------~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~r~~~~ 450 (521)
+++++... . . .|...+..+..-.......+ +.+..+.|....++..+-.
T Consensus 107 ~LFa~Vi~P~~~~~hp~~~~~~~~~~~~p~~l~~~ili~~~Ws~s~~Yi~aELWgslV~S~lFw~faNeitt~~eakRFy 186 (509)
T COG3202 107 ALFAFVIYPYKDILHPDPEFSRDLFADLPMFLKWFILIVGEWSYSLFYIMAELWGSLVLSLLFWQFANEITTIEEAKRFY 186 (509)
T ss_pred HHHHHHHhccccccCCCHHHHHHHHhhCCccceeeeEeecchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHhhhhH
Confidence 44433210 0 0 02233333333333344445 7888999999999989999
Q ss_pred HHHHHhhhhhhhHHHHHHHh
Q 039541 451 SLVRQAVNLGAAFSPVLISA 470 (521)
Q Consensus 451 ~~~~~~~~~g~~~~p~~~~~ 470 (521)
++.+...+++..++..+..+
T Consensus 187 ~lf~l~~ni~lllsg~~~~~ 206 (509)
T COG3202 187 PLFGLGANISLLLSGEVTSW 206 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 99999999988877777654
No 292
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=91.54 E-value=1.1 Score=43.27 Aligned_cols=112 Identities=12% Similarity=0.039 Sum_probs=84.9
Q ss_pred ccchhhHHH-HHHHHHHhhhhhhhccccCCCCchHHHHHHHHH--HHHHHH------HHhccccHHHHHHHHHHhhccch
Q 039541 117 ILSGLPSSC-FFIGCLLGGLALSTLGDSSSLGRKKLLFLSCFA--MSITAL------ATIFANNIWIYSTIRFVAGFFRA 187 (521)
Q Consensus 117 ~~~~~~~s~-~~lg~~i~~~~~g~l~dr~~~Grr~~l~~~~~~--~~~~~~------~~~~~~~~~~l~~~r~l~G~~~g 187 (521)
+..-.+... |.+.-.+|.+.+.++-++ +||...+..++= +.-... ...+-++-+.+++.-.+.|+..|
T Consensus 282 ~y~~~~~~l~fN~~d~vG~~~a~~~~~~---~~r~l~i~v~lR~lfiPlF~~cn~~~~~v~~~~~~~~~~l~~~lglsnG 358 (406)
T KOG1479|consen 282 WYALLLVFLSFNVFDLIGSILAALLTWP---DPRKLTIPVLLRLLFIPLFLLCNYPPLPVVFESDGWFIFLMSLLGLSNG 358 (406)
T ss_pred hhHHHHHHHHhHHHHHhhhhhhhcccCC---CCceehHHHHHHHHHHHHHHHhccCCCCceecCchHHHHHHHHHHhccc
Confidence 455666677 889999998888888876 566555443322 221222 11334677888899999999999
Q ss_pred hhHhhhhhheeeeecCcchhHHHHHHHHHHHHHHHHHHHHHHhh
Q 039541 188 PIMTSVIVLLSEMVSKRWRGQVVIIGFTFFSFGLVSLPAVAYLS 231 (521)
Q Consensus 188 ~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~i~~~i~~~~ 231 (521)
=.......+..+-.|++++-.+..+.......|...|.+++++.
T Consensus 359 Yltsl~m~~aPk~v~~~e~e~aG~~m~~fl~~Gl~~G~~~s~l~ 402 (406)
T KOG1479|consen 359 YLTSLIMMYAPKQVKPSEKEAAGNLMVFFLVGGLALGSLLSWVF 402 (406)
T ss_pred hHhhheehhcCCCCChHHHHHHHHHHHHHHHHHHHHhhHHHHHH
Confidence 99999999999999999999999999999999999998887653
No 293
>KOG2601 consensus Iron transporter [Inorganic ion transport and metabolism]
Probab=91.51 E-value=2.8 Score=39.68 Aligned_cols=38 Identities=8% Similarity=-0.023 Sum_probs=29.9
Q ss_pred HHHHHhhccccCchhhhhhhHHHHHhhhhhhhHHHHHH
Q 039541 431 NVLLVFGTELFTTCVRNSTTSLVRQAVNLGAAFSPVLI 468 (521)
Q Consensus 431 ~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~ 468 (521)
....-...|..|++.|..+.|+.|..+..-..+--+++
T Consensus 405 lAVtqimQe~VpEseR~vv~gvqnsL~~~ldll~~ilv 442 (503)
T KOG2601|consen 405 LAVTQIMQETVPESERCVVFGVQNSLNSALDLLKDILV 442 (503)
T ss_pred HHHHHHHHHhcchhhhhhhHhHHHHHHHHHHHHHHhEE
Confidence 46667788999999999999999998876665554443
No 294
>KOG2881 consensus Predicted membrane protein [Function unknown]
Probab=90.88 E-value=6.1 Score=35.11 Aligned_cols=31 Identities=19% Similarity=-0.003 Sum_probs=19.8
Q ss_pred HHHHHHHHHhhcCCchHHHHHHHHHHHHHHH
Q 039541 373 AYLLTFILIERWSRKSSILTFCILSGTCSAI 403 (521)
Q Consensus 373 ~~~~~g~l~dr~g~~~~~~~~~~~~~i~~~~ 403 (521)
+.+.+-+++.|+.-|++.+++.++..+..+.
T Consensus 256 AVigGk~lAskIS~rtVt~~ggi~Fi~Fgl~ 286 (294)
T KOG2881|consen 256 AVIGGKYLASKISVRTVTLIGGILFIIFGLV 286 (294)
T ss_pred HHhhhHHHhhhheeEEEEEecchhHHHHHHH
Confidence 3344556788888888777776655555433
No 295
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=89.82 E-value=12 Score=35.82 Aligned_cols=124 Identities=14% Similarity=0.045 Sum_probs=64.3
Q ss_pred HHHHHhHHhhccCCCccHHHHHHHHHHHhH--hHHHHHHHHHh-----hcCCchHH-HHHHHHHHHHHHHHHhcCCch--
Q 039541 342 GVVYFGLLLGVGNLSFNIYLSLAFNGLLDI--PAYLLTFILIE-----RWSRKSSI-LTFCILSGTCSAICVAIGDEQ-- 411 (521)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~g~l~d-----r~g~~~~~-~~~~~~~~i~~~~~~~~~~~~-- 411 (521)
+... .+|++++..+.+..... +.++... --.++...++| |+||||.. +-+..+.+..+..+....+..
T Consensus 48 GL~~-~iP~lL~ak~vSyt~~a-~fS~ay~P~sLKllWaPiVDs~y~k~~GrrksWvvp~q~llG~~mllLs~~v~~~~g 125 (510)
T KOG3574|consen 48 GLIG-AIPLLLQAKGVSYTSQA-IFSFAYWPFSLKLLWAPIVDSVYSKRFGRRKSWVVPCQYLLGLFMLLLSYLVDRGLG 125 (510)
T ss_pred hHhh-hhHHHhcCCCcchhhhh-hhhhhhhHHHHHHHHHhhhHHHHHHhhccccceeeehHHHHHHHHHHHhhCCCcccc
Confidence 4444 78888886655432222 2222222 22356667777 99998743 334455555555554432210
Q ss_pred -----H--HHHHHHHHHHHHHHHHHHHHHHHhhccccCchhhhhhhHHHHHhhhhhhhHHHHH
Q 039541 412 -----E--VLQIGLELASFFSACVAFNVLLVFGTELFTTCVRNSTTSLVRQAVNLGAAFSPVL 467 (521)
Q Consensus 412 -----~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~ 467 (521)
+ ......+++..|....--...-.++..+..++.-|-++.........|.+++-.+
T Consensus 126 ~ng~~p~v~~lt~~f~LLnflaAtQDIAVDgwALtmLs~e~lgyaST~q~Vg~~~GyfL~~~i 188 (510)
T KOG3574|consen 126 GNGGLPNVVALTLLFLLLNFLAATQDIAVDGWALTMLSRENLGYASTCQSVGQTAGYFLGNVV 188 (510)
T ss_pred cCCCCcchHHHHHHHHHHHHHHhhhhhhhhHHHHHhcCHhhcCchhHHHHHHHhhhHHhhcce
Confidence 1 1122233344444333334555566666677776777766665566666655443
No 296
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=88.57 E-value=5.4 Score=36.06 Aligned_cols=131 Identities=11% Similarity=0.020 Sum_probs=84.5
Q ss_pred hhhHHHHHHHHHHhhhhhhhccccCCCCchHHHHHHHHHHHHHHHHHhcc----c---cHHHHHHHHHHhhccchhhHhh
Q 039541 120 GLPSSCFFIGCLLGGLALSTLGDSSSLGRKKLLFLSCFAMSITALATIFA----N---NIWIYSTIRFVAGFFRAPIMTS 192 (521)
Q Consensus 120 ~~~~s~~~lg~~i~~~~~g~l~dr~~~Grr~~l~~~~~~~~~~~~~~~~~----~---~~~~l~~~r~l~G~~~g~~~~~ 192 (521)
|.+.+.++++..+|+-+..++..|++..-.+.+.+..++.++...+.... + +...=+++..+.-.+.|..+|.
T Consensus 285 GfiFatFMlASmLGSSla~Rl~s~s~~~ve~ymqivf~vs~a~l~Lpilt~~vsP~kes~~~s~i~F~~~E~cvGlfwPS 364 (454)
T KOG4332|consen 285 GFIFATFMLASMLGSSLASRLLSRSSPKVESYMQIVFLVSIAALLLPILTSSVSPSKESPSESLIGFCLFEACVGLFWPS 364 (454)
T ss_pred hhHHHHHHHHHHHhhHHHHHHHhcCCcccchHHHHHHHHHHHHHHHHHHHhccCCCcCCchHHHHHHHHHHHHHhhcchH
Confidence 99999999999999999999888833444455555555555444443322 1 2333355666666778889999
Q ss_pred hhhheeeeecCcchhHHHHHHHHHHHHHHHHHHHHHHhhc--CCchhHHHHHHHHHHHHHH
Q 039541 193 VIVLLSEMVSKRWRGQVVIIGFTFFSFGLVSLPAVAYLSR--GSSWKMLYVWTSIPSIVCC 251 (521)
Q Consensus 193 ~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~i~~~i~~~~~--~~~wr~~f~~~~~~~~~~~ 251 (521)
...+-.++.|++.|...+.++..-.++=..++-. ..-.+ ..+-|..|-+......+..
T Consensus 365 imkmRsqyIPEearstimNfFRvPLnifvClvLy-nlh~~~~p~~tr~mf~icS~~~~~a~ 424 (454)
T KOG4332|consen 365 IMKMRSQYIPEEARSTIMNFFRVPLNIFVCLVLY-NLHVDAFPTTTRNMFGICSAFLFVAS 424 (454)
T ss_pred HHHHHHhhCCHHHHhhhhhheechhhHhhhhhhe-ecccccCccccchhhhhhHHHHHHHH
Confidence 9999999999999999888775433221111110 11111 2356677877776665554
No 297
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=88.42 E-value=0.16 Score=47.89 Aligned_cols=110 Identities=20% Similarity=0.151 Sum_probs=3.8
Q ss_pred hhHHHHHHHHHHhhhhhhhccccCCCCchHHHHHHH--HHHHHHHHHHh----------ccccHHHHHHHHHHhhccchh
Q 039541 121 LPSSCFFIGCLLGGLALSTLGDSSSLGRKKLLFLSC--FAMSITALATI----------FANNIWIYSTIRFVAGFFRAP 188 (521)
Q Consensus 121 ~~~s~~~lg~~i~~~~~g~l~dr~~~Grr~~l~~~~--~~~~~~~~~~~----------~~~~~~~l~~~r~l~G~~~g~ 188 (521)
.+...|.++-.+|..+.++.--+ ...+|.+.+.++ +++....++|. +.+|-+..++.-++.|+..|-
T Consensus 186 ~~fl~Fn~gD~iGR~l~~~~~~~-~~~~~~l~~~s~~R~~fiPlf~~cn~~p~~~~~~~~~~~d~~~~i~~~l~g~TNGy 264 (309)
T PF01733_consen 186 VLFLLFNLGDFIGRFLASWPRWP-GPSPRWLWILSLLRFLFIPLFLLCNVQPRPRYLPVLFNSDAWFIILMLLFGFTNGY 264 (309)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHhcchhcceeEec-ccccccHHHHHHHHHHHHHHHHHHHhhcccccCCCcccchHHHHHHHHHHHHccch
Confidence 45667888888888877764211 012444433211 22222222221 234556778889999999999
Q ss_pred hHhhhhhheeeeecCcchhHHHHHHHHHHHHHHHHHHHHHHhh
Q 039541 189 IMTSVIVLLSEMVSKRWRGQVVIIGFTFFSFGLVSLPAVAYLS 231 (521)
Q Consensus 189 ~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~i~~~i~~~~ 231 (521)
.......+..+..++++|..+..+...+..+|..+|..+++++
T Consensus 265 l~tl~m~~~p~~v~~~e~e~aG~~~~~~L~~Gl~~Gs~ls~~~ 307 (309)
T PF01733_consen 265 LSTLAMMYAPKSVSPEERELAGSVMSFFLSFGLFIGSVLSFLL 307 (309)
T ss_dssp --HHHH-------------------------------------
T ss_pred hhhceeeeCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999988887654
No 298
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=87.61 E-value=3 Score=30.29 Aligned_cols=64 Identities=14% Similarity=-0.079 Sum_probs=48.6
Q ss_pred hHHhhccCCCccHHHHH---HHHHHHhHhHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHhcCCc
Q 039541 347 GLLLGVGNLSFNIYLSL---AFNGLLDIPAYLLTFILIERWSRKSSILTFCILSGTCSAICVAIGDE 410 (521)
Q Consensus 347 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~i~~~~~~~~~~~ 410 (521)
.+|...++.+.+..... ....++-++|.+...++.++..+++.+..+.+...+..+.+.+..+.
T Consensus 14 lLP~M~~~~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~~~~~~~~ma~~~~~ 80 (85)
T PF06779_consen 14 LLPLMQADGGLSLSQAGWLASANYLGYLVGALLASRLPRHSRPRRLLRAGLLLTVLSTAAMALTHSF 80 (85)
T ss_pred HhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHhch
Confidence 35778888777654443 44557778888888888888788888999999888888888776554
No 299
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=87.44 E-value=1.8 Score=39.81 Aligned_cols=78 Identities=12% Similarity=0.070 Sum_probs=65.6
Q ss_pred HHHHHHHHHHHHhccccHHHHHHHHHHhhccchhhHhhhhhheeeeecCcchhHHHHHHHHHHHHHHHHHHHHHHhhc
Q 039541 155 SCFAMSITALATIFANNIWIYSTIRFVAGFFRAPIMTSVIVLLSEMVSKRWRGQVVIIGFTFFSFGLVSLPAVAYLSR 232 (521)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~i~~~i~~~~~ 232 (521)
-.+++.+...+..+.++++..++.-+.-|+-.|..++...--+.+-.++++|-.+++....+-++|..++.+++.-++
T Consensus 325 vNl~ff~~~a~~~ftpsi~ivf~lI~~EGLlGGasYVNTf~~i~~e~~pd~rEfamsavs~sDS~Gi~lA~~lalplh 402 (409)
T KOG3880|consen 325 VNLLFFLLQAWYWFTPSIWIVFALILFEGLLGGASYVNTFHNIHKETEPDVREFAMSAVSISDSIGIFLAGLLALPLH 402 (409)
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHhhcCchHHHHHHHHHhhcCCchHHHHhHhhheecchhhHHHHHHHhccch
Confidence 334555556666788999999999999999999999999888888888899999999999999999999888865544
No 300
>COG4262 Predicted spermidine synthase with an N-terminal membrane domain [General function prediction only]
Probab=86.09 E-value=11 Score=35.60 Aligned_cols=107 Identities=12% Similarity=0.082 Sum_probs=65.9
Q ss_pred ccchhhHHHHHHHHHHhhhhhhhccccCCCCchHHHHHHHHHHHHHH----HHH-hcc----ccHHHHHHHHHHhhccch
Q 039541 117 ILSGLPSSCFFIGCLLGGLALSTLGDSSSLGRKKLLFLSCFAMSITA----LAT-IFA----NNIWIYSTIRFVAGFFRA 187 (521)
Q Consensus 117 ~~~~~~~s~~~lg~~i~~~~~g~l~dr~~~Grr~~l~~~~~~~~~~~----~~~-~~~----~~~~~l~~~r~l~G~~~g 187 (521)
.+.+.+.+.|...+.+|+...-++.|. --.-+.+..-+++..++. ++. .|+ ++-+.+++.-++.|.-.|
T Consensus 43 lq~S~Iia~yl~amGlGs~~sry~~dd--~~~~~Fv~vElllgligg~Sa~~ly~~FA~~~~~~~~Vly~lt~vIG~LVG 120 (508)
T COG4262 43 LQTSLIIAGYLAAMGLGSLLSRYVLDD--AALARFVDVELLLGLIGGVSAAALYLLFALESAPSRLVLYALTAVIGVLVG 120 (508)
T ss_pred eehHHHHHHHHHHhchhhhhhccccCc--hHHHHHHHHHHHHHHhccchHHHHHHHHHhccchHHHHHHHHHHHHHHHHh
Confidence 444999999999999999999998886 333333322222222221 111 222 466788889999999999
Q ss_pred hhHhhhhhheeeeecCcchhHHHHHHHHHHHHHHHHHHHH
Q 039541 188 PIMTSVIVLLSEMVSKRWRGQVVIIGFTFFSFGLVSLPAV 227 (521)
Q Consensus 188 ~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~i~~~i 227 (521)
.-.|..+.++..-. .+-....+.....-.+|.+.+.++
T Consensus 121 ~EiPL~mrml~~r~--a~~k~~~s~vl~~DYLGal~~gLl 158 (508)
T COG4262 121 AEIPLLMRMLQRRQ--AKAKDLGSRVLTLDYLGALAGGLL 158 (508)
T ss_pred cchHHHHHHHHHHH--HHHHhhhhhhhhhHhhhhhhHHHH
Confidence 99999988876511 111122222223355666666555
No 301
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=83.38 E-value=4.4 Score=38.12 Aligned_cols=97 Identities=14% Similarity=0.079 Sum_probs=76.9
Q ss_pred ccchhhHHHHHHHHHHhhhhhhhccccCCCCchH--HHHHHHHHHHHHHHHHhccccHHHHHHHHHHhhccchhhHhhhh
Q 039541 117 ILSGLPSSCFFIGCLLGGLALSTLGDSSSLGRKK--LLFLSCFAMSITALATIFANNIWIYSTIRFVAGFFRAPIMTSVI 194 (521)
Q Consensus 117 ~~~~~~~s~~~lg~~i~~~~~g~l~dr~~~Grr~--~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~ 194 (521)
...|..-++..+..+++++..|++.-+ +.|.. .+.++.+..+...++++.++++|..+++..+.+..-....+.+.
T Consensus 271 vyNG~veAv~tlLGa~~~~~~g~l~i~--w~r~g~~ll~~~s~~~agllf~m~~t~~Iw~~Ya~yvlfr~~y~l~itiA~ 348 (433)
T KOG3810|consen 271 VYNGAVEAVSTLLGAIAALAAGYLNIN--WNRWGDLLLAVGSAVQAGLLFIMAQTQHIWVCYAGYVLFRVIYQLTITIAT 348 (433)
T ss_pred hhcCHHHHHHHHHHHHHHHHHHheeec--cchhhHHHHHHHHHHhhhhhhhhhcccceehhhhhHHHHHhhHhhhhhHHH
Confidence 334888899999999999999999988 77763 34456666666677788889999998888888877777888888
Q ss_pred hheeeeecCcchhHHHHHHHH
Q 039541 195 VLLSEMVSKRWRGQVVIIGFT 215 (521)
Q Consensus 195 ~~i~~~~~~~~rg~~~~~~~~ 215 (521)
.-+++....+.-|..+|+...
T Consensus 349 ~~iA~nL~~e~~gLvFGiNTF 369 (433)
T KOG3810|consen 349 FQIARNLSSELFGLVFGINTF 369 (433)
T ss_pred HHHHHhhhhhhheeeeehHHH
Confidence 888888887887888777653
No 302
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=81.79 E-value=20 Score=32.47 Aligned_cols=103 Identities=18% Similarity=0.279 Sum_probs=56.5
Q ss_pred hhhHHHHHHHHHHhhhhhhhccccCCCCchHHHH----HHHHHHHHHHHHHhc-c----ccHHHHHHHHHHhhccchhhH
Q 039541 120 GLPSSCFFIGCLLGGLALSTLGDSSSLGRKKLLF----LSCFAMSITALATIF-A----NNIWIYSTIRFVAGFFRAPIM 190 (521)
Q Consensus 120 ~~~~s~~~lg~~i~~~~~g~l~dr~~~Grr~~l~----~~~~~~~~~~~~~~~-~----~~~~~l~~~r~l~G~~~g~~~ 190 (521)
....-++..|..+|.+..|+.... .+.||+.+. .++++..++.+.... . .++..+++.-|+.|++.=+..
T Consensus 144 ~~~~I~fv~g~~~G~~~ig~~nkt-~~kRk~fi~~~~~~gi~~~~l~~~~~~~~g~~~~~~~~~f~I~~Fl~G~f~WgiQ 222 (267)
T PF07672_consen 144 PIFQILFVAGYFLGPFTIGLWNKT-NYKRKPFIHFIISLGIVFFVLSIVVVYFVGPGNAAGFAFFYIFGFLAGFFLWGIQ 222 (267)
T ss_pred HHHHHHHHHHHhhhceeeccchhh-hhhhhhHHHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHhhh
Confidence 555566667777887888887764 567777665 234444444444211 1 135677778888887654444
Q ss_pred hhhhhheeeeecCcchhHHHHHHHHHHHHHHHHH
Q 039541 191 TSVIVLLSEMVSKRWRGQVVIIGFTFFSFGLVSL 224 (521)
Q Consensus 191 ~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~i~ 224 (521)
++...+=-| .+...+-+..-.++..+++|.++-
T Consensus 223 ~ViL~lPhE-yK~~~pk~ig~~Fg~iWGfGY~~y 255 (267)
T PF07672_consen 223 GVILNLPHE-YKGYNPKKIGIQFGLIWGFGYIFY 255 (267)
T ss_pred HHHhcChhh-hcCCCcceehhHHHHHHHHHHHHH
Confidence 443322222 222233333344455566666653
No 303
>COG1230 CzcD Co/Zn/Cd efflux system component [Inorganic ion transport and metabolism]
Probab=74.21 E-value=75 Score=29.52 Aligned_cols=29 Identities=14% Similarity=0.158 Sum_probs=16.8
Q ss_pred hhhhhhhH-HHHHhhhhhhhHHHHHHHhhc
Q 039541 444 CVRNSTTS-LVRQAVNLGAAFSPVLISAGR 472 (521)
Q Consensus 444 ~~r~~~~~-~~~~~~~~g~~~~p~~~~~~~ 472 (521)
..|+...- +.-..+++|.+++..+..+..
T Consensus 154 N~r~a~LHvl~D~Lgsv~vIia~i~i~~~~ 183 (296)
T COG1230 154 NMRGAYLHVLGDALGSVGVIIAAIVIRFTG 183 (296)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 34554443 345566777777777665543
No 304
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=72.30 E-value=24 Score=36.48 Aligned_cols=126 Identities=17% Similarity=0.026 Sum_probs=75.2
Q ss_pred HHhHhHHHHHHHHHhh-cCCchHHHHHHHHHHHHHHHHHhcCC-------------c-----hH-----HHHHHHHHHHH
Q 039541 368 LLDIPAYLLTFILIER-WSRKSSILTFCILSGTCSAICVAIGD-------------E-----QE-----VLQIGLELASF 423 (521)
Q Consensus 368 ~~~~~~~~~~g~l~dr-~g~~~~~~~~~~~~~i~~~~~~~~~~-------------~-----~~-----~~~~~~~~~~~ 423 (521)
.......+++++++|. +||.+.+.++.++..+++.++.+... . .. ..++..+.+..
T Consensus 84 G~~~~~~l~g~~laD~f~gry~tI~~~s~i~~~G~~~lt~~a~~~~l~p~~~~~~~~~~~c~~~s~~q~~~~~~~l~lia 163 (571)
T KOG1237|consen 84 GTQFLLPLLGAFLADSFLGRYFTINIGSLISLLGLFGLTLSAMIPALLPFMCKFKPGGNVCESPSKLQLAVLYGALYLIA 163 (571)
T ss_pred hHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccccCCCCCCcccCcchHHHHHHHHHHHHhe
Confidence 3445567889999997 48888888888777777554443210 0 00 23334444444
Q ss_pred HHHHHHHHHHHHhhccccCch----hhh--hhhHHHHHhhhhhhhHHHHHHHhh--ccchhHHHHHHHHHHHHHhHhh
Q 039541 424 FSACVAFNVLLVFGTELFTTC----VRN--STTSLVRQAVNLGAAFSPVLISAG--RQNEFLSFGVFGLVVFCFGFFV 493 (521)
Q Consensus 424 ~~~~~~~~~~~~~~~~~~~~~----~r~--~~~~~~~~~~~~g~~~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 493 (521)
++.++.-+....+-+|-++.. .+. .-+.......++|..++-.+.-+. ..++...|.+..++..++.+++
T Consensus 164 ~G~gg~r~~~~~fGadQfd~~~~~~~~~~~~fFnW~yf~~~~g~l~a~t~~vyiq~~~~w~lgf~i~~~~~~lai~iF 241 (571)
T KOG1237|consen 164 LGAGGIRPCLLAFGADQFDELDPVEVKGIPSFFNWFYFSQNGGALLAQTVLVYIQDNVGWKLGFGIPTVLNALAILIF 241 (571)
T ss_pred eccCCCCCcchhhcccccCccCcchhhCcccchhHHHHHHHHHHHHHHHHHHhhhhcccceeeccHHHHHHHHHHHHH
Confidence 556666678888888888732 222 344455555567777666665543 3456666666666665555443
No 305
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=68.30 E-value=8.4 Score=28.95 Aligned_cols=43 Identities=19% Similarity=0.182 Sum_probs=29.6
Q ss_pred ccchhhHHHHHHHHHHhhhhhhhccccCCCCchHHHHHHHHHHH
Q 039541 117 ILSGLPSSCFFIGCLLGGLALSTLGDSSSLGRKKLLFLSCFAMS 160 (521)
Q Consensus 117 ~~~~~~~s~~~lg~~i~~~~~g~l~dr~~~Grr~~l~~~~~~~~ 160 (521)
...+.-.+.-+++..+.....||+.|| .+|-+|..++..++.+
T Consensus 42 ~~~a~klssefIsGilVGa~iG~llD~-~agTsPwglIv~lllG 84 (116)
T COG5336 42 YAQAFKLSSEFISGILVGAGIGWLLDK-FAGTSPWGLIVFLLLG 84 (116)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHH-hcCCCcHHHHHHHHHH
Confidence 333666677778888888889999999 3466666555544433
No 306
>PF06912 DUF1275: Protein of unknown function (DUF1275); InterPro: IPR010699 This family consists of several hypothetical bacterial proteins of around 200 residues in length. The function of this family is unknown although a few members are thought to be membrane proteins.
Probab=63.87 E-value=1e+02 Score=26.98 Aligned_cols=17 Identities=12% Similarity=0.255 Sum_probs=9.5
Q ss_pred HHHHHHHHHhhhhhhhc
Q 039541 124 SCFFIGCLLGGLALSTL 140 (521)
Q Consensus 124 s~~~lg~~i~~~~~g~l 140 (521)
....+++.+|..+.+.+
T Consensus 53 ~~~i~~F~~G~~~~~~i 69 (209)
T PF06912_consen 53 LLAILSFILGAFLAGLI 69 (209)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 44445555666666666
No 307
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=62.85 E-value=24 Score=26.66 Aligned_cols=26 Identities=12% Similarity=-0.074 Sum_probs=14.4
Q ss_pred HhHhHHHHHHHHHhhc-CCchHHHHHH
Q 039541 369 LDIPAYLLTFILIERW-SRKSSILTFC 394 (521)
Q Consensus 369 ~~~~~~~~~g~l~dr~-g~~~~~~~~~ 394 (521)
.+++.....||+.||+ +.+.+-++.+
T Consensus 54 sGilVGa~iG~llD~~agTsPwglIv~ 80 (116)
T COG5336 54 SGILVGAGIGWLLDKFAGTSPWGLIVF 80 (116)
T ss_pred HHHHHHHHHHHHHHHhcCCCcHHHHHH
Confidence 3444455678888886 4444433333
No 308
>TIGR00844 c_cpa1 na(+)/h(+) antiporter. This model is specific for the fungal members of this family.
Probab=60.77 E-value=2.5e+02 Score=30.40 Aligned_cols=34 Identities=6% Similarity=0.174 Sum_probs=19.2
Q ss_pred HHHHHHHHHHHHHHHHhh-cCCchhHHHHHHHHHH
Q 039541 214 FTFFSFGLVSLPAVAYLS-RGSSWKMLYVWTSIPS 247 (521)
Q Consensus 214 ~~~~~~G~~i~~~i~~~~-~~~~wr~~f~~~~~~~ 247 (521)
..+..++.++..++++.+ ..++|...+++.++++
T Consensus 107 ~~~M~lT~livAL~a~~Li~GL~~~~ALLLGAILA 141 (810)
T TIGR00844 107 VPVMTSGWLVIALFVWILVPGLNFPASLLMGACIT 141 (810)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhhhc
Confidence 334455555555555433 5677777766655544
No 309
>PF11299 DUF3100: Protein of unknown function (DUF3100); InterPro: IPR021450 Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently no function is known.
Probab=57.99 E-value=7 Score=34.19 Aligned_cols=101 Identities=15% Similarity=0.174 Sum_probs=64.0
Q ss_pred CCcceeeecceeeCCccccchhhHHHHHHHHHHhhhhhhhccccCCCCchHHHHHHHHHHHHHHHHHhccccHHHHHHHH
Q 039541 100 SDTTIISDWSLECAGSSILSGLPSSCFFIGCLLGGLALSTLGDSSSLGRKKLLFLSCFAMSITALATIFANNIWIYSTIR 179 (521)
Q Consensus 100 ~~~~i~~~~~~~~~~~~~~~~~~~s~~~lg~~i~~~~~g~l~dr~~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r 179 (521)
++-.+.+.||++..|. -=+.+.|..|..+|.++.+.++.- +. + + +...=...-
T Consensus 126 ~laiI~ekYGldSpEg----rGVl~~Yi~GTvfGtiffsllas~--~a-------~------------~--~~fhP~ALA 178 (241)
T PF11299_consen 126 NLAIISEKYGLDSPEG----RGVLGVYIIGTVFGTIFFSLLASL--LA-------S------------L--GIFHPYALA 178 (241)
T ss_pred ceeeeehhcCCCCccc----cceEEEeeehhhHHHHHHHHHHHH--HH-------h------------c--cCCCHHHHH
Confidence 3667888899888776 445566777777777666665542 00 0 0 000111223
Q ss_pred HHhhccchhhHhhhhhheeeeecCcchhHHHHHHHHHHHHHHHHHHHHH
Q 039541 180 FVAGFFRAPIMTSVIVLLSEMVSKRWRGQVVIIGFTFFSFGLVSLPAVA 228 (521)
Q Consensus 180 ~l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~i~~~i~ 228 (521)
.-.|+|+|.++.++..-+.+.+| +......++-.....+..+.|-.+.
T Consensus 179 MasGvGSgSMMaAa~~aL~~~~P-~~a~~i~A~AaaSNllt~~~G~Y~~ 226 (241)
T PF11299_consen 179 MASGVGSGSMMAAASGALAAAYP-EMADQILAFAAASNLLTSVTGLYMS 226 (241)
T ss_pred HHcCCcHHHHHHHHHHHHHHHCc-chHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34689999999998888888886 5666677776666666666655443
No 310
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=51.73 E-value=1.3e+02 Score=30.45 Aligned_cols=51 Identities=8% Similarity=0.144 Sum_probs=43.2
Q ss_pred HHHHHHHHHhhccchhhHhhhhhheeeeecCcchhHHHHHHHHHHHHHHHH
Q 039541 173 WIYSTIRFVAGFFRAPIMTSVIVLLSEMVSKRWRGQVVIIGFTFFSFGLVS 223 (521)
Q Consensus 173 ~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~i 223 (521)
..+++...+.-+..-..+++..++=+.+.+|.--|+.|.++++..++|.--
T Consensus 406 ~lvI~~~~l~sf~stvmFVai~AFharISDP~IGGTYMTLLNTvSNLGGtW 456 (544)
T PF13000_consen 406 LLVIIQHVLSSFMSTVMFVAIMAFHARISDPAIGGTYMTLLNTVSNLGGTW 456 (544)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhccCcccchHHHHHHHHHHhcCCCc
Confidence 345556788888888899999999999999999999999999998888643
No 311
>PF03547 Mem_trans: Membrane transport protein; InterPro: IPR004776 This entry represents a mostly uncharacterised family of membrane transport proteins found in eukaryotes, bacteria and archaea. Most characterised members of this family are the PIN components of auxin efflux systems from plants. These carriers are saturable, auxin-specific, and localized to the basal ends of auxin transport-competent cells [, ]. Plants typically posses several of these proteins, each displaying a unique tissue-specific expression pattern. They are expressed in almost all plant tissues including vascular tissues and roots, and influence many processes including the establishment of embryonic polarity, plant growth, apical hook formation in seedlings and the photo- and gravitrophic responses. These plant proteins are typically 600-700 amino acyl residues long and exhibit 8-12 transmembrane segments.; GO: 0055085 transmembrane transport, 0016021 integral to membrane
Probab=51.17 E-value=1.7e+02 Score=28.56 Aligned_cols=18 Identities=28% Similarity=0.347 Sum_probs=10.5
Q ss_pred HHhHhHHHHHHHHHhhcC
Q 039541 368 LLDIPAYLLTFILIERWS 385 (521)
Q Consensus 368 ~~~~~~~~~~g~l~dr~g 385 (521)
+..++...+.|++..|++
T Consensus 6 i~~i~~ii~~G~~~~~~~ 23 (385)
T PF03547_consen 6 ILPIFLIILLGYLLGRFG 23 (385)
T ss_pred HHHHHHHHHHHHHHHHhC
Confidence 344455556677777654
No 312
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=47.69 E-value=72 Score=26.22 Aligned_cols=36 Identities=8% Similarity=-0.082 Sum_probs=27.1
Q ss_pred HHHHHHHHHhhccccCchhhhhhhHHHHHhhhhhhh
Q 039541 427 CVAFNVLLVFGTELFTTCVRNSTTSLVRQAVNLGAA 462 (521)
Q Consensus 427 ~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ 462 (521)
.+...+.|...+..-.++..|+..|+-.+-.+++.+
T Consensus 109 ~gllGisYGilSaSWD~~r~GSllG~~e~~~N~~r~ 144 (153)
T PF11947_consen 109 LGLLGISYGILSASWDPEREGSLLGWEEFKRNWGRM 144 (153)
T ss_pred HHHHhhhhhhcccccCCCCCCCcccHHHHHHhHHHH
Confidence 344567788888888888779999988877776654
No 313
>TIGR02230 ATPase_gene1 F0F1-ATPase subunit, putative. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophic stretches and is presumed to be a subunit of the enzyme.
Probab=45.50 E-value=49 Score=24.92 Aligned_cols=33 Identities=15% Similarity=0.020 Sum_probs=19.3
Q ss_pred HHHHHhhhhhhhccccCCCCchHHHHHHHHHHHH
Q 039541 128 IGCLLGGLALSTLGDSSSLGRKKLLFLSCFAMSI 161 (521)
Q Consensus 128 lg~~i~~~~~g~l~dr~~~Grr~~l~~~~~~~~~ 161 (521)
+...+...+.|...|+ +||-++.+.+.+++.++
T Consensus 53 v~pil~G~~lG~WLD~-~~~t~~~~tl~~lllGv 85 (100)
T TIGR02230 53 AIPTLLGVAVGIWLDR-HYPSPFSWTLTMLIVGV 85 (100)
T ss_pred HHHHHHHHHHHHHHHh-hcCCCcHHHHHHHHHHH
Confidence 3444455566667776 58877766555544444
No 314
>PRK10263 DNA translocase FtsK; Provisional
Probab=45.01 E-value=5e+02 Score=29.96 Aligned_cols=21 Identities=19% Similarity=0.148 Sum_probs=12.4
Q ss_pred HHHHhHhHHHHHHHHHhhcCC
Q 039541 366 NGLLDIPAYLLTFILIERWSR 386 (521)
Q Consensus 366 ~~~~~~~~~~~~g~l~dr~g~ 386 (521)
.+.++.+|..+...+..-+|-
T Consensus 61 ~Nl~GiVGA~LAD~L~~LFGl 81 (1355)
T PRK10263 61 HNLGGMPGAWLADTLFFIFGV 81 (1355)
T ss_pred ccccchHHHHHHHHHHHHHhH
Confidence 345556666666666666664
No 315
>PRK15049 L-asparagine permease; Provisional
Probab=43.51 E-value=3.3e+02 Score=27.76 Aligned_cols=11 Identities=27% Similarity=0.332 Sum_probs=4.9
Q ss_pred CCchHHHHHHH
Q 039541 146 LGRKKLLFLSC 156 (521)
Q Consensus 146 ~Grr~~l~~~~ 156 (521)
+|++.-++.+.
T Consensus 102 ~G~~~gf~~GW 112 (499)
T PRK15049 102 LGEKAAYVAGW 112 (499)
T ss_pred hCcHhHHHHHH
Confidence 45554444333
No 316
>PF03547 Mem_trans: Membrane transport protein; InterPro: IPR004776 This entry represents a mostly uncharacterised family of membrane transport proteins found in eukaryotes, bacteria and archaea. Most characterised members of this family are the PIN components of auxin efflux systems from plants. These carriers are saturable, auxin-specific, and localized to the basal ends of auxin transport-competent cells [, ]. Plants typically posses several of these proteins, each displaying a unique tissue-specific expression pattern. They are expressed in almost all plant tissues including vascular tissues and roots, and influence many processes including the establishment of embryonic polarity, plant growth, apical hook formation in seedlings and the photo- and gravitrophic responses. These plant proteins are typically 600-700 amino acyl residues long and exhibit 8-12 transmembrane segments.; GO: 0055085 transmembrane transport, 0016021 integral to membrane
Probab=43.34 E-value=3.2e+02 Score=26.54 Aligned_cols=19 Identities=26% Similarity=0.394 Sum_probs=9.7
Q ss_pred HHHHHHHHHHHHHHHhhcC
Q 039541 215 TFFSFGLVSLPAVAYLSRG 233 (521)
Q Consensus 215 ~~~~~G~~i~~~i~~~~~~ 233 (521)
...+.|.+--|++..+...
T Consensus 102 ~~~N~~~lglpi~~~l~g~ 120 (385)
T PF03547_consen 102 SFGNTGFLGLPILQALFGE 120 (385)
T ss_pred cCCcchhhHHHHHHHHhcc
Confidence 3455555555666444443
No 317
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=43.26 E-value=3e+02 Score=26.25 Aligned_cols=12 Identities=25% Similarity=0.340 Sum_probs=5.2
Q ss_pred HHHHHHHhhcCC
Q 039541 375 LLTFILIERWSR 386 (521)
Q Consensus 375 ~~~g~l~dr~g~ 386 (521)
+.-=++.++..+
T Consensus 185 V~~E~~v~~~~~ 196 (334)
T PF06027_consen 185 VLEEKLVKKAPR 196 (334)
T ss_pred HHHHHhcccCCH
Confidence 334444444443
No 318
>PF01102 Glycophorin_A: Glycophorin A; InterPro: IPR001195 Proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane. Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins [Reid M.E., Lomas-Francis C. The Blood Group Antigen FactsBook Academic Press, London / San Diego, (1997)]. Glycophorin A (PAS-2) and glycophorin B (PAS-3) belong to the MNS blood group system and are associated with antigens that include M/N, S/s, U, He, Mi(a), M(c), Vw, Mur, M(g), Vr, M(e), Mt(a), St(a), Ri(a), Cl(a), Ny(a), Hut, Hil, M(v), Far, Mit, Dantu, Hop, Nob, En(a), ENKT, amongst others. Glycophorin A is the major sialoglycoprotein of the erythrocyte membrane []. Structurally, glycophorin A consists of an N-terminal extracellular domain, heavily glycosylated on serine and threonine residues, followed by a transmembrane region and a C-terminal cytoplasmic domain. Other glycophorins in this entry such as Glycophorin B and Glycophorin E represent minor sialoglycoproteins in the erythrocyte membrane.; GO: 0016021 integral to membrane; PDB: 2KPF_B 1AFO_B 2KPE_A.
Probab=43.05 E-value=17 Score=28.52 Aligned_cols=12 Identities=0% Similarity=-0.125 Sum_probs=4.4
Q ss_pred hhhccccCCCCC
Q 039541 492 FVVFLPETIGVT 503 (521)
Q Consensus 492 ~~~~~~~~~~~~ 503 (521)
+++++++.++|.
T Consensus 84 i~y~irR~~Kk~ 95 (122)
T PF01102_consen 84 ISYCIRRLRKKS 95 (122)
T ss_dssp HHHHHHHHS---
T ss_pred HHHHHHHHhccC
Confidence 344555545544
No 319
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=43.00 E-value=1.1e+02 Score=29.08 Aligned_cols=69 Identities=14% Similarity=-0.001 Sum_probs=40.6
Q ss_pred HHhHhHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHhcCCchH-HHHHHHHHHHHHHHHHHHHHHHHhhccc
Q 039541 368 LLDIPAYLLTFILIERWSRKSSILTFCILSGTCSAICVAIGDEQE-VLQIGLELASFFSACVAFNVLLVFGTEL 440 (521)
Q Consensus 368 ~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~i~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 440 (521)
+.-+..+++.+.+++++|-|.++.++......... .....- ...+....+.|++.+..+...-+++++.
T Consensus 69 ~~l~~s~m~~~~~Ir~~g~K~tm~lav~~Y~lyiA----~Nl~pr~~tlVPa~~~~G~aa~p~W~SkgtYlT~~ 138 (390)
T KOG3097|consen 69 LSLIDSSMFMPLLIRFLGTKWTMVLAVFPYALYIA----ANLEPRYETLVPAGLVLGMAAGPIWASKGTYLTPM 138 (390)
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHH----hhcchhHHhhccHHHhhccccccccccCcceecHH
Confidence 34445566667999999999987766554433222 111111 3445566777777777776555554443
No 320
>TIGR02230 ATPase_gene1 F0F1-ATPase subunit, putative. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophic stretches and is presumed to be a subunit of the enzyme.
Probab=40.74 E-value=1.6e+02 Score=22.32 Aligned_cols=30 Identities=10% Similarity=0.076 Sum_probs=14.6
Q ss_pred HhHHHHHHHHHhhcCCchHHHHHHHHHHHH
Q 039541 371 IPAYLLTFILIERWSRKSSILTFCILSGTC 400 (521)
Q Consensus 371 ~~~~~~~g~l~dr~g~~~~~~~~~~~~~i~ 400 (521)
++|.+++-||-++++......+.+++.+++
T Consensus 57 l~G~~lG~WLD~~~~t~~~~tl~~lllGv~ 86 (100)
T TIGR02230 57 LLGVAVGIWLDRHYPSPFSWTLTMLIVGVV 86 (100)
T ss_pred HHHHHHHHHHHhhcCCCcHHHHHHHHHHHH
Confidence 344444555555566555444444444433
No 321
>COG4769 Predicted membrane protein [Function unknown]
Probab=39.75 E-value=24 Score=29.06 Aligned_cols=54 Identities=13% Similarity=0.021 Sum_probs=38.5
Q ss_pred HHHHHHHHHhhhhhhhccccCCCCchHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHhhcc
Q 039541 124 SCFFIGCLLGGLALSTLGDSSSLGRKKLLFLSCFAMSITALATIFANNIWIYSTIRFVAGFF 185 (521)
Q Consensus 124 s~~~lg~~i~~~~~g~l~dr~~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~ 185 (521)
..+.+...+.+...-++..+ +|.|.+-++|... .-++.+|..++++++++.|-.
T Consensus 80 Fl~sfaG~i~S~L~m~~l~~--f~~k~~S~lgiS~------mGaF~hNl~QLivas~Lv~~~ 133 (181)
T COG4769 80 FLYSFAGAILSTLFMYFLYQ--FGPKYLSLLGISV------MGAFTHNLGQLIVASFLVFTT 133 (181)
T ss_pred HHHHHHHHHHHHHHHHHHHH--cCCceEeeeehhh------HHHHHHhHHHHHHHHHHHhcc
Confidence 34555666666777778888 9988875555433 345779999999999997644
No 322
>KOG4830 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=36.68 E-value=1.7e+02 Score=26.70 Aligned_cols=77 Identities=10% Similarity=0.016 Sum_probs=35.4
Q ss_pred HHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHHHHHhhccccCc--hhhhhhhHHHHHhhhhhhhHHHHHH
Q 039541 392 TFCILSGTCSAICVAIGDEQEVLQIGLELASFFSACVAFNVLLVFGTELFTT--CVRNSTTSLVRQAVNLGAAFSPVLI 468 (521)
Q Consensus 392 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~r~~~~~~~~~~~~~g~~~~p~~~ 468 (521)
.|.++-..+...+.+.+..-....+...++.|+...........+.+.+... +.++...|-..++-.+...++-.+.
T Consensus 273 aGgiiwifcga~ilLlpr~i~symyAisvfIGIAnAimlvtslsitavli~~~~~~~aFv~GamSF~DKlS~GiA~~li 351 (412)
T KOG4830|consen 273 AGGIIWIFCGAVILLLPRGIKSYMYAISVFIGIANAIMLVTSLSITAVLINKNTESGAFVYGAMSFFDKLSNGIAYQLI 351 (412)
T ss_pred cccHHHHHhhhheeecccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCceEEEehHHHHHhhcccHHHHHH
Confidence 3333333333333333333112334444445555554444444444444433 3344555666666666655555444
No 323
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=34.66 E-value=79 Score=26.00 Aligned_cols=51 Identities=10% Similarity=-0.057 Sum_probs=35.0
Q ss_pred ccHHHHHHHHHHhhccchhhHhhhhhheeeeecCcchhHHHHHHHHHHHHHHHH
Q 039541 170 NNIWIYSTIRFVAGFFRAPIMTSVIVLLSEMVSKRWRGQVVIIGFTFFSFGLVS 223 (521)
Q Consensus 170 ~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~i 223 (521)
+++..++..-.+.|+| ...+.+..++-..++++.|..+|+-..-.+++.+.
T Consensus 95 P~~~~~~~S~~~Fg~g---llGisYGilSaSWD~~r~GSllG~~e~~~N~~r~~ 145 (153)
T PF11947_consen 95 PPWAVLLVSLVFFGLG---LLGISYGILSASWDPEREGSLLGWEEFKRNWGRMW 145 (153)
T ss_pred CchHHHHHHHHHHHHH---HHhhhhhhcccccCCCCCCCcccHHHHHHhHHHHH
Confidence 3444555555555544 44566667777788888999999988888877654
No 324
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=34.37 E-value=87 Score=23.79 Aligned_cols=49 Identities=12% Similarity=0.099 Sum_probs=40.8
Q ss_pred hhhHHHHHHHHHHhhhhhhhccccCCCCchHHHHHHHHHHHHHHHHHhccc
Q 039541 120 GLPSSCFFIGCLLGGLALSTLGDSSSLGRKKLLFLSCFAMSITALATIFAN 170 (521)
Q Consensus 120 ~~~~s~~~lg~~i~~~~~g~l~dr~~~Grr~~l~~~~~~~~~~~~~~~~~~ 170 (521)
|=+.++|.=-+++.++++++..|+ .-+.+.=.+|..+..+|..+..+.+
T Consensus 57 GRvYAAYGGvfI~~Sl~W~w~vdg--~~Pd~~D~iGa~i~L~G~~iI~~~P 105 (107)
T PF02694_consen 57 GRVYAAYGGVFIVASLLWGWLVDG--VRPDRWDWIGAAICLVGVAIILFAP 105 (107)
T ss_pred hhHHHHhhhhHHHHHHHHHhhhcC--cCCChHHHHhHHHHHHhHHheEecC
Confidence 778889988999999999999999 8888877888888777777665543
No 325
>TIGR01667 YCCS_YHJK integral membrane protein, YccS/YhfK family. TMHMM on members of this model shows a consensus of 11 transmembrane helices separated into two clusters, an N-terminal cluster of 6 and a central cluster of 5. This would indicate two non-membrane domains one on each side of the membrane
Probab=33.60 E-value=3.1e+02 Score=29.37 Aligned_cols=54 Identities=19% Similarity=0.247 Sum_probs=36.0
Q ss_pred hhhhccccC--CCCchHHHHHHHHHHHHHHHHHhcc-ccHHHHHHHHHHhhccchhh
Q 039541 136 ALSTLGDSS--SLGRKKLLFLSCFAMSITALATIFA-NNIWIYSTIRFVAGFFRAPI 189 (521)
Q Consensus 136 ~~g~l~dr~--~~Grr~~l~~~~~~~~~~~~~~~~~-~~~~~l~~~r~l~G~~~g~~ 189 (521)
+.+-++|.. .-||.+-++++.++++++++...+. +..|.+..+-++.+++.+..
T Consensus 42 ia~~l~D~~~~~~~R~~~l~it~~~f~i~sl~v~ll~~~p~~~~~~l~~~tf~~~ml 98 (701)
T TIGR01667 42 IAAGLDDLDDRLTGRLKNLIITLSCFSIASFLVQLLFPKPWLFPFLLTLLTFGFILL 98 (701)
T ss_pred HhhccCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHH
Confidence 445566651 2356788888888888888888765 44556666666776665543
No 326
>PF06645 SPC12: Microsomal signal peptidase 12 kDa subunit (SPC12); InterPro: IPR009542 This family consists of several microsomal signal peptidase 12 kDa subunit proteins. Translocation of polypeptide chains across the endoplasmic reticulum (ER) membrane is triggered by signal sequences. Subsequently, signal recognition particle interacts with its membrane receptor and the ribosome-bound nascent chain is targeted to the ER where it is transferred into a protein-conducting channel. At some point, a second signal sequence recognition event takes place in the membrane and translocation of the nascent chain through the membrane occurs. The signal sequence of most secretory and membrane proteins is cleaved off at this stage. Cleavage occurs by the signal peptidase complex (SPC) as soon as the lumenal domain of the translocating polypeptide is large enough to expose its cleavage site to the enzyme. The signal peptidase complex is possibly also involved in proteolytic events in the ER membrane other than the processing of the signal sequence, for example the further digestion of the cleaved signal peptide or the degradation of membrane proteins. Mammalian signal peptidase is as a complex of five different polypeptide chains. This family represents the 12 kDa subunit (SPC12).; GO: 0008233 peptidase activity, 0006465 signal peptide processing, 0005787 signal peptidase complex, 0016021 integral to membrane
Probab=32.85 E-value=1.8e+02 Score=20.63 Aligned_cols=41 Identities=7% Similarity=0.075 Sum_probs=28.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHH
Q 039541 209 VVIIGFTFFSFGLVSLPAVAYLSRGSSWKMLYVWTSIPSIVCC 251 (521)
Q Consensus 209 ~~~~~~~~~~~G~~i~~~i~~~~~~~~wr~~f~~~~~~~~~~~ 251 (521)
+--+.+....++.+++.++|++.+ +.+..+++.++..++.+
T Consensus 9 ae~l~~~il~~~~iisfi~Gy~~q--~~~~~~~~~~~g~~~~~ 49 (76)
T PF06645_consen 9 AEKLMQYILIISAIISFIVGYITQ--SFSYTFYIYGAGVVLTL 49 (76)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHH
Confidence 344566677778888888898887 67777776665555544
No 327
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=32.78 E-value=1.9e+02 Score=27.79 Aligned_cols=18 Identities=22% Similarity=0.551 Sum_probs=10.2
Q ss_pred HhhcCCchHHHHHHHHHH
Q 039541 381 IERWSRKSSILTFCILSG 398 (521)
Q Consensus 381 ~dr~g~~~~~~~~~~~~~ 398 (521)
.||+...|++.+..-+.+
T Consensus 208 ~e~ft~sKllav~~si~G 225 (416)
T KOG2765|consen 208 VERFTLSKLLAVFVSIAG 225 (416)
T ss_pred cchhhHHHHHHHHHhhcc
Confidence 677776666554444333
No 328
>PF08611 DUF1774: Fungal protein of unknown function (DUF1774); InterPro: IPR013920 This is a fungal protein of unknown function.
Probab=32.40 E-value=1.6e+02 Score=22.00 Aligned_cols=19 Identities=5% Similarity=0.006 Sum_probs=11.5
Q ss_pred hhHHHHHHHHHHHHHhHhh
Q 039541 475 EFLSFGVFGLVVFCFGFFV 493 (521)
Q Consensus 475 ~~~~~~~~~~~~~~~~~~~ 493 (521)
+-.+|.+.+++.+.+....
T Consensus 52 WIFAFvI~avlfv~sl~va 70 (97)
T PF08611_consen 52 WIFAFVIAAVLFVLSLVVA 70 (97)
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 4556667777666655443
No 329
>PF13536 EmrE: Multidrug resistance efflux transporter
Probab=31.57 E-value=2.4e+02 Score=21.60 Aligned_cols=22 Identities=27% Similarity=0.249 Sum_probs=12.7
Q ss_pred HhhcCCchHHHHHHHHHHHHHH
Q 039541 381 IERWSRKSSILTFCILSGTCSA 402 (521)
Q Consensus 381 ~dr~g~~~~~~~~~~~~~i~~~ 402 (521)
-+|..+|+...+..+..++.++
T Consensus 83 ~er~~~~~~~a~~l~~~Gv~li 104 (113)
T PF13536_consen 83 KERLSPRRWLAILLILIGVILI 104 (113)
T ss_pred cCCCCHHHHHHHHHHHHHHHHH
Confidence 3567777766655555544443
No 330
>TIGR01666 YCCS hypothetical membrane protein, TIGR01666. This model represents a clade of sequences from gamma and beta proteobacteria. These proteins are 700 amino acids long and many have been annotated as putative membrane proteins. The gene from Salmonella has been annotated as a putative efflux transporter. The gene from E. coli has the name yccS.
Probab=30.98 E-value=3.3e+02 Score=29.23 Aligned_cols=53 Identities=19% Similarity=0.264 Sum_probs=35.0
Q ss_pred hhhccccC--CCCchHHHHHHHHHHHHHHHHHhcc-ccHHHHHHHHHHhhccchhh
Q 039541 137 LSTLGDSS--SLGRKKLLFLSCFAMSITALATIFA-NNIWIYSTIRFVAGFFRAPI 189 (521)
Q Consensus 137 ~g~l~dr~--~~Grr~~l~~~~~~~~~~~~~~~~~-~~~~~l~~~r~l~G~~~g~~ 189 (521)
.+-++|.. .-||.+-++++.+++.++++...+. +..|.+..+-++.+++.++.
T Consensus 43 a~al~D~d~~~~~R~~~l~~t~~~f~i~sl~v~ll~~~p~lf~~~l~~~tf~~~ml 98 (704)
T TIGR01666 43 AAALVDLDDRLTGRLKNVIFTLICFSIASFSVELLFGKPWLFAVGLTVSTFGFIML 98 (704)
T ss_pred hhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHH
Confidence 35566652 2467777788888888888877665 45566666667766665543
No 331
>PF12805 FUSC-like: FUSC-like inner membrane protein yccS
Probab=30.72 E-value=1.6e+02 Score=27.24 Aligned_cols=37 Identities=11% Similarity=0.248 Sum_probs=21.2
Q ss_pred HHHHHHHHHHHHHHhcc-ccHHHHHHHHHHhhccchhh
Q 039541 153 FLSCFAMSITALATIFA-NNIWIYSTIRFVAGFFRAPI 189 (521)
Q Consensus 153 ~~~~~~~~~~~~~~~~~-~~~~~l~~~r~l~G~~~g~~ 189 (521)
+.+++++++++++..+. ++.|.+.+.-++.+++.+..
T Consensus 3 ~~~~~~~~~~s~~~~l~~~~~~l~~~~~~~~~F~~~ml 40 (284)
T PF12805_consen 3 IATLLCFALASLLVGLLFPYPWLLILVLALLTFFFGML 40 (284)
T ss_pred HHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHH
Confidence 44555554555555444 55666666667776665543
No 332
>PTZ00370 STEVOR; Provisional
Probab=30.57 E-value=69 Score=29.26 Aligned_cols=27 Identities=7% Similarity=0.033 Sum_probs=14.1
Q ss_pred HHHHHHHHHHHHhHhhhccccCCCCCC
Q 039541 478 SFGVFGLVVFCFGFFVVFLPETIGVTL 504 (521)
Q Consensus 478 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 504 (521)
+-+++.+++++.++++.|+.++|+++.
T Consensus 260 aalvllil~vvliilYiwlyrrRK~sw 286 (296)
T PTZ00370 260 AALVLLILAVVLIILYIWLYRRRKNSW 286 (296)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhcchh
Confidence 333444444444556666666665543
No 333
>PF02990 EMP70: Endomembrane protein 70; InterPro: IPR004240 The transmembrane 9 superfamily protein (TM9SF) may function as a channel or small molecule transporter. Proteins in this group are endosomal integral membrane proteins.; GO: 0016021 integral to membrane
Probab=30.57 E-value=3.7e+02 Score=27.62 Aligned_cols=25 Identities=16% Similarity=0.165 Sum_probs=16.9
Q ss_pred HHHHHHHhHhHHHHHHHHHhhcCCc
Q 039541 363 LAFNGLLDIPAYLLTFILIERWSRK 387 (521)
Q Consensus 363 ~~~~~~~~~~~~~~~g~l~dr~g~~ 387 (521)
.....+.+.+++..++++-..++.+
T Consensus 303 i~~y~~~~~iaGy~S~~~yk~~~g~ 327 (521)
T PF02990_consen 303 IILYALTSFIAGYVSARLYKSFGGK 327 (521)
T ss_pred HHHHHHHhhHHHHHHHHHHHHcCCC
Confidence 3445566777777788877777643
No 334
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=30.06 E-value=2.5e+02 Score=21.42 Aligned_cols=49 Identities=18% Similarity=-0.111 Sum_probs=36.3
Q ss_pred HHHHHHHHHHHhHhHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHhc
Q 039541 359 IYLSLAFNGLLDIPAYLLTFILIERWSRKSSILTFCILSGTCSAICVAI 407 (521)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~i~~~~~~~~ 407 (521)
..-.....+-.-++.+++.++.+|+....+.=.++..++.++..++.+.
T Consensus 56 fGRvYAAYGGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~~ 104 (107)
T PF02694_consen 56 FGRVYAAYGGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIILFA 104 (107)
T ss_pred chhHHHHhhhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheEec
Confidence 3445556666677888999999999988887777777777776665543
No 335
>COG1268 BioY Uncharacterized conserved protein [General function prediction only]
Probab=29.99 E-value=1.1e+02 Score=26.20 Aligned_cols=24 Identities=13% Similarity=0.527 Sum_probs=20.6
Q ss_pred HHHHHHHHHHhhhhhhhccccCCCCc
Q 039541 123 SSCFFIGCLLGGLALSTLGDSSSLGR 148 (521)
Q Consensus 123 ~s~~~lg~~i~~~~~g~l~dr~~~Gr 148 (521)
+.-|.+++.+++.+.|+++|| .-+
T Consensus 88 TgGyL~gfi~aa~l~G~l~~k--~~~ 111 (184)
T COG1268 88 TGGYLIGFIIAAFLIGLLAEK--IRK 111 (184)
T ss_pred chhHHHHHHHHHHHHHHHHHh--hhc
Confidence 366789999999999999999 664
No 336
>PF07760 DUF1616: Protein of unknown function (DUF1616); InterPro: IPR011674 This is a group of sequences from hypothetical archaeal proteins. The region in question is approximately 330 amino acid residues long.
Probab=29.68 E-value=2.1e+02 Score=26.62 Aligned_cols=61 Identities=11% Similarity=0.213 Sum_probs=38.5
Q ss_pred HHHHHHHhhccchhhHhhhhhheeeeecCcchhHHHHHHHHHHHHHHHHHHHHHHhhcCCch
Q 039541 175 YSTIRFVAGFFRAPIMTSVIVLLSEMVSKRWRGQVVIIGFTFFSFGLVSLPAVAYLSRGSSW 236 (521)
Q Consensus 175 l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~G~~i~~~i~~~~~~~~w 236 (521)
--..|.+.|+-. ..+..++++++-.+|++++--..--...+.+++.++.|++|.++....|
T Consensus 22 ~~~lr~~~g~~~-vlf~PGy~l~~~lfp~~~~l~~~er~~ls~glSi~~~~~~g~~l~~~~~ 82 (287)
T PF07760_consen 22 IPPLRVILGFPF-VLFLPGYALVAALFPRKHDLDGIERLALSVGLSIAIVPLIGLLLNYTPW 82 (287)
T ss_pred hhHHHHHHHHHH-HHHhccHHHHHHHccCcCCCcHHHHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 456677777654 3556677888888886555433333445555666667777877764444
No 337
>PRK02237 hypothetical protein; Provisional
Probab=27.93 E-value=1.4e+02 Score=22.88 Aligned_cols=49 Identities=10% Similarity=0.070 Sum_probs=40.1
Q ss_pred hhhHHHHHHHHHHhhhhhhhccccCCCCchHHHHHHHHHHHHHHHHHhccc
Q 039541 120 GLPSSCFFIGCLLGGLALSTLGDSSSLGRKKLLFLSCFAMSITALATIFAN 170 (521)
Q Consensus 120 ~~~~s~~~lg~~i~~~~~g~l~dr~~~Grr~~l~~~~~~~~~~~~~~~~~~ 170 (521)
|=+.++|.=-+++.++++++..|+ .-+-+.=.+|..+..+|..+..+.+
T Consensus 59 GRvYAAYGGvyI~~Sl~W~w~vdg--~~Pd~~D~iGa~v~L~G~~iI~~~p 107 (109)
T PRK02237 59 GRVYAAYGGVYVAGSLLWLWVVDG--VRPDRWDWIGAAICLVGMAVIMYAP 107 (109)
T ss_pred hhHHHHhhhHHHHHHHHHHHHhcC--cCCChhHHHhHHHHHHhHHHheecC
Confidence 778889998999999999999999 8877777777777777776665543
No 338
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=26.97 E-value=4.1e+02 Score=24.40 Aligned_cols=128 Identities=9% Similarity=0.068 Sum_probs=0.0
Q ss_pred CCchHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHHHHHhhccccCchhhhhhhHHHHHhhhhhhh-H
Q 039541 385 SRKSSILTFCILSGTCSAICVAIGDEQEVLQIGLELASFFSACVAFNVLLVFGTELFTTCVRNSTTSLVRQAVNLGAA-F 463 (521)
Q Consensus 385 g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~-~ 463 (521)
|+-.--..+..+.++...+.......+.+..-...++.++..+..++......-..+..--.++++-+....+-+++. +
T Consensus 10 G~~~~Q~lG~t~Gali~alv~~~~~~p~~~~~~~~~~~~~lsG~~W~iGq~~qf~s~~~~GVS~tmPiStg~QLvg~sl~ 89 (269)
T PF06800_consen 10 GKPANQILGTTIGALIFALVVFLFRQPAFSMSGTSFIVAFLSGAFWAIGQIGQFKSFKKIGVSKTMPISTGLQLVGTSLI 89 (269)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHhCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcceeeeccchhHHHHHHHHH
Q ss_pred HHHHHHhhccchhHHHHHHHHHHHHHhHhhhccccCCCCCCCcchHhhh
Q 039541 464 SPVLISAGRQNEFLSFGVFGLVVFCFGFFVVFLPETIGVTLCDTLDQQE 512 (521)
Q Consensus 464 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 512 (521)
+-++.+-........+.+.+++.++..+..--.+|.++...++.....+
T Consensus 90 gv~~fgEW~~~~~~~~G~~Al~liiiGv~lts~~~~~~~~~~~~~~~~k 138 (269)
T PF06800_consen 90 GVLFFGEWTTTTQKIIGFLALVLIIIGVILTSYQDKKSDKSSSKSNMKK 138 (269)
T ss_pred HHhhcCCCCCcchHHHHHHHHHHHHHHHHHhccccccccccccccchhh
No 339
>KOG4112 consensus Signal peptidase subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=26.88 E-value=1.2e+02 Score=22.35 Aligned_cols=32 Identities=6% Similarity=-0.003 Sum_probs=23.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhcCCchhH
Q 039541 207 GQVVIIGFTFFSFGLVSLPAVAYLSRGSSWKM 238 (521)
Q Consensus 207 g~~~~~~~~~~~~G~~i~~~i~~~~~~~~wr~ 238 (521)
.++==+.+....+|.++|.+.|+..+.++|..
T Consensus 22 kkaEr~~q~ilti~aiVg~i~Gf~~Qqls~tv 53 (101)
T KOG4112|consen 22 KKAERFQQLILTIGAIVGFIYGFAQQQLSVTV 53 (101)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34445567778889999998898888666654
No 340
>PF10785 NADH-u_ox-rdase: NADH-ubiquinone oxidoreductase complex I, 21 kDa subunit; InterPro: IPR019721 This domain is found in the N-terminal region of NADH-ubiquinone oxidoreductase 21kDa subunits from plants and fungi [].
Probab=25.42 E-value=1.5e+02 Score=21.61 Aligned_cols=43 Identities=7% Similarity=-0.032 Sum_probs=30.4
Q ss_pred HHHHHhhhhhhhccccCCCCc-------hHHHHHHHHHHHHHHHHHhccccH
Q 039541 128 IGCLLGGLALSTLGDSSSLGR-------KKLLFLSCFAMSITALATIFANNI 172 (521)
Q Consensus 128 lg~~i~~~~~g~l~dr~~~Gr-------r~~l~~~~~~~~~~~~~~~~~~~~ 172 (521)
.+...+.+.++++.+| .-+ ++.+.++.++...+.+++++..|.
T Consensus 29 a~~ta~~p~~~~~~~~--~~~~~~~~~~~~~~~~a~~ig~~gGfl~ayqrS~ 78 (86)
T PF10785_consen 29 AGATAASPPLGYYMER--SAPSRVGRGGGPAMRLAGAIGFFGGFLLAYQRSS 78 (86)
T ss_pred HHHHHHHHHHHHHHhc--ccccccccccchHHHHHHHHHHHHHHHHHHHHhh
Confidence 4444556666677766 433 788888888888888888876653
No 341
>PF02632 BioY: BioY family; InterPro: IPR003784 BioMNY proteins are considered to constitute tripartite biotin transporters in prokaryotes. One-third of the widespread bioY genes are linked to bioMN. Many bioY genes are located at loci encoding biotin biosynthesis, while others are unlinked to biotin metabolic or transport genes. BioY is a high-capacity transporter that is converted to a high-affinity system in the presence of BioMN. BioMNY-mediated biotin uptake is severely impaired by the replacement of the Walker A lysine residue in BioM, demonstrating the dependency of high-affinity transport on a functional ATPase [].
Probab=24.41 E-value=1.2e+02 Score=25.00 Aligned_cols=26 Identities=23% Similarity=0.524 Sum_probs=21.8
Q ss_pred HHHHHHHHHHhhhhhhhccccCCCCchH
Q 039541 123 SSCFFIGCLLGGLALSTLGDSSSLGRKK 150 (521)
Q Consensus 123 ~s~~~lg~~i~~~~~g~l~dr~~~Grr~ 150 (521)
+.-|.+|+.+.+.+.|++.+| ..+++
T Consensus 59 TgGyl~gf~~~a~i~g~~~~~--~~~~~ 84 (148)
T PF02632_consen 59 TGGYLLGFPLAALIIGLLAER--LKRSR 84 (148)
T ss_pred CChHHHHHHHHHHHHHHHHHh--ccccc
Confidence 356788999999999999999 88764
No 342
>PF06645 SPC12: Microsomal signal peptidase 12 kDa subunit (SPC12); InterPro: IPR009542 This family consists of several microsomal signal peptidase 12 kDa subunit proteins. Translocation of polypeptide chains across the endoplasmic reticulum (ER) membrane is triggered by signal sequences. Subsequently, signal recognition particle interacts with its membrane receptor and the ribosome-bound nascent chain is targeted to the ER where it is transferred into a protein-conducting channel. At some point, a second signal sequence recognition event takes place in the membrane and translocation of the nascent chain through the membrane occurs. The signal sequence of most secretory and membrane proteins is cleaved off at this stage. Cleavage occurs by the signal peptidase complex (SPC) as soon as the lumenal domain of the translocating polypeptide is large enough to expose its cleavage site to the enzyme. The signal peptidase complex is possibly also involved in proteolytic events in the ER membrane other than the processing of the signal sequence, for example the further digestion of the cleaved signal peptide or the degradation of membrane proteins. Mammalian signal peptidase is as a complex of five different polypeptide chains. This family represents the 12 kDa subunit (SPC12).; GO: 0008233 peptidase activity, 0006465 signal peptide processing, 0005787 signal peptidase complex, 0016021 integral to membrane
Probab=24.07 E-value=1.5e+02 Score=21.10 Aligned_cols=30 Identities=13% Similarity=0.094 Sum_probs=16.5
Q ss_pred HHHHHHHhhccchhHHHHHHHHHHHHHhHh
Q 039541 463 FSPVLISAGRQNEFLSFGVFGLVVFCFGFF 492 (521)
Q Consensus 463 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 492 (521)
+..++.|+...+....+.++++..++++++
T Consensus 22 iisfi~Gy~~q~~~~~~~~~~~g~~~~~lv 51 (76)
T PF06645_consen 22 IISFIVGYITQSFSYTFYIYGAGVVLTLLV 51 (76)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 444555665555666666666555554443
No 343
>COG4262 Predicted spermidine synthase with an N-terminal membrane domain [General function prediction only]
Probab=23.90 E-value=6.7e+02 Score=24.28 Aligned_cols=27 Identities=7% Similarity=-0.021 Sum_probs=21.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 039541 413 VLQIGLELASFFSACVAFNVLLVFGTE 439 (521)
Q Consensus 413 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 439 (521)
+++++...+.|...+.-.|..+.+...
T Consensus 106 ~Vly~lt~vIG~LVG~EiPL~mrml~~ 132 (508)
T COG4262 106 LVLYALTAVIGVLVGAEIPLLMRMLQR 132 (508)
T ss_pred HHHHHHHHHHHHHHhcchHHHHHHHHH
Confidence 677778888888888888887777765
No 344
>TIGR02865 spore_II_E stage II sporulation protein E. Stage II sporulation protein E (SpoIIE) is a multiple membrane spanning protein with two separable functions. It plays a role in the switch to polar cell division during sporulation. By means of it protein phosphatase activity, located in the C-terminal region, it activates sigma-F. All proteins that score above the trusted cutoff to this model are found in endospore-forming Gram-positive bacteria. Surprisingly, a sequence from the Cyanobacterium-like (and presumably non-spore-forming) photosynthesizer Heliobacillus mobilis is homologous, and scores between the trusted and noise cutoffs.
Probab=23.46 E-value=9.9e+02 Score=26.07 Aligned_cols=24 Identities=17% Similarity=-0.094 Sum_probs=11.3
Q ss_pred HHHHHHHHHHHHHHHHHHhhcccc
Q 039541 418 LELASFFSACVAFNVLLVFGTELF 441 (521)
Q Consensus 418 ~~~~~~~~~~~~~~~~~~~~~~~~ 441 (521)
+....|.+.|....+...++..+.
T Consensus 189 ~a~~gG~~~Gaa~Gv~~Gli~~l~ 212 (764)
T TIGR02865 189 ISYIGGSGAGAAGGVVIGVILGLA 212 (764)
T ss_pred HHHhcCchHhHHHHHHHHHHHHhc
Confidence 333444445555555555544444
No 345
>PF10183 ESSS: ESSS subunit of NADH:ubiquinone oxidoreductase (complex I) ; InterPro: IPR019329 NADH:ubiquinone oxidoreductase (complex I) (1.6.5.3 from EC) is a respiratory-chain enzyme that catalyses the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane (NADH + ubiquinone = NAD+ + ubiquinol) []. Complex I is a major source of reactive oxygen species (ROS) that are predominantly formed by electron transfer from FMNH(2). Complex I is found in bacteria, cyanobacteria (as a NADH-plastoquinone oxidoreductase), archaea [], mitochondira, and in the hydrogenosome, a mitochondria-derived organelle. In general, the bacterial complex consists of 14 different subunits, while the mitochondrial complex contains homologues to these subunits in addition to approximately 31 additional proteins []. Mitochondrial complex I, which is located in the inner mitochondrial membrane, is the largest multimeric respiratory enzyme in the mitochondria, consisting of more than 40 subunits, one FMN co-factor and eight FeS clusters []. The assembly of mitochondrial complex I is an intricate process that requires the cooperation of the nuclear and mitochondrial genomes [, ]. Mitochondrial complex I can cycle between active and deactive forms that can be distinguished by the reactivity towards divalent cations and thiol-reactive agents. All redox prosthetic groups reside in the peripheral arm of the L-shaped structure. The NADH oxidation domain harbouring the FMN cofactor is connected via a chain of iron-sulphur clusters to the ubiquinone reduction site that is located in a large pocket formed by the PSST and 49kDa subunits of complex I []. This entry represents the ESSS subunit from mitochondrial NADH:ubiquinone oxidoreductase (complex I). It carries mitochondrial import sequences [].
Probab=23.31 E-value=79 Score=24.14 Aligned_cols=31 Identities=10% Similarity=0.294 Sum_probs=23.4
Q ss_pred cCCchhHHHHHHHHHHHHHHhhhceeeecch
Q 039541 232 RGSSWKMLYVWTSIPSIVCCIIIYPFISESP 262 (521)
Q Consensus 232 ~~~~wr~~f~~~~~~~~~~~~~~~~~~~esp 262 (521)
+..+|+.+|++...++++.+.+.+.+.||+.
T Consensus 55 d~e~we~~~f~~~~~~~v~~~~~~~y~PD~~ 85 (105)
T PF10183_consen 55 DWEGWELPFFFGFSGSLVFGGVFLAYKPDTS 85 (105)
T ss_pred hHhhhHHHHHHHHHHHHHHHHHHHHcCCCCC
Confidence 3458999999877777777767777778864
No 346
>TIGR03802 Asp_Ala_antiprt aspartate-alanine antiporter. All members of the seed alignment for this model are asparate-alanine anti-transporters (AspT) encoded next to the gene for aspartate 4-decarboxylase (AspD), which converts asparate to alanine, releasing CO2. The exchange of Asp for Ala is electrogenic, so the AspD/AspT system confers a proton-motive force. This transporter contains two copies of the AspT/YidE/YbjL antiporter duplication domain (TIGR01625).
Probab=22.93 E-value=6.9e+02 Score=26.00 Aligned_cols=10 Identities=30% Similarity=0.737 Sum_probs=4.6
Q ss_pred hHHHHHHHHH
Q 039541 476 FLSFGVFGLV 485 (521)
Q Consensus 476 ~~~~~~~~~~ 485 (521)
.++|.+.+++
T Consensus 164 ~YpfGvig~i 173 (562)
T TIGR03802 164 TYIFGTIGVI 173 (562)
T ss_pred hhhhHHHHHH
Confidence 3445444444
No 347
>PF04550 Phage_holin_2: Phage holin family 2 ; InterPro: IPR007633 This entry represents the Bacteriophage P2, GpY, holin protein. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. This protein family represent one of a large number of mutually dissimilar families of phage holins. It is thought that the temporal precision of holin-mediated lysis may occur through the build-up of a holin oligomer which causes the lysis [].
Probab=22.52 E-value=3.1e+02 Score=20.09 Aligned_cols=34 Identities=6% Similarity=0.016 Sum_probs=26.1
Q ss_pred ccHHHHHHHHHHhhccchhhHhhhhhheeeeecC
Q 039541 170 NNIWIYSTIRFVAGFFRAPIMTSVIVLLSEMVSK 203 (521)
Q Consensus 170 ~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~ 203 (521)
+--+=++++|.+.|-+.+....+......|..|.
T Consensus 29 pit~RL~iGR~ilGs~~S~~Aga~Li~~Pdl~pl 62 (89)
T PF04550_consen 29 PITLRLFIGRVILGSAVSVVAGAALIQFPDLPPL 62 (89)
T ss_pred CCchhHHhHHHHHhhHHHHHHHHHHhcCCCCCHH
Confidence 3456789999999998887777777777777663
No 348
>PRK10697 DNA-binding transcriptional activator PspC; Provisional
Probab=21.96 E-value=49 Score=25.83 Aligned_cols=17 Identities=24% Similarity=0.278 Sum_probs=10.3
Q ss_pred HHHHhhhceeeecchhH
Q 039541 248 IVCCIIIYPFISESPRW 264 (521)
Q Consensus 248 ~~~~~~~~~~~~esp~~ 264 (521)
++.-+++++.+|+.|..
T Consensus 53 ~~~Yi~l~~~lp~~P~~ 69 (118)
T PRK10697 53 LVAYIILSFALDPMPDN 69 (118)
T ss_pred HHHHHHHHHhccCCccc
Confidence 33334667788877643
No 349
>COG2836 Uncharacterized conserved protein [Function unknown]
Probab=21.55 E-value=5.8e+02 Score=22.69 Aligned_cols=37 Identities=27% Similarity=0.118 Sum_probs=23.5
Q ss_pred HHHHHHHHHHhHhHHHHHHHHHhhcC---CchHHHHHHHH
Q 039541 360 YLSLAFNGLLDIPAYLLTFILIERWS---RKSSILTFCIL 396 (521)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~g~l~dr~g---~~~~~~~~~~~ 396 (521)
.......+++.++.-+..|..++++. ||+....+..+
T Consensus 167 al~mlaFGlGTlP~ll~~G~~s~~~s~~~r~~~~rl~~gl 206 (232)
T COG2836 167 ALVMLAFGLGTLPNLLAMGIFSSKLSKSSRKRLNRLSGGL 206 (232)
T ss_pred HHHHHHHhhcccHHHHHHHHHHHHHHHHHHHHHHHHHhHH
Confidence 44556677778887788888877753 45544444433
No 350
>COG1971 Predicted membrane protein [Function unknown]
Probab=21.03 E-value=5.4e+02 Score=22.15 Aligned_cols=37 Identities=22% Similarity=0.117 Sum_probs=21.9
Q ss_pred HHhHhHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHH
Q 039541 368 LLDIPAYLLTFILIERWSRKSSILTFCILSGTCSAIC 404 (521)
Q Consensus 368 ~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~i~~~~~ 404 (521)
+...+|..++..+...+|+|--+..+.++..++.-.+
T Consensus 148 il~~~G~~IG~~~g~~~g~~ae~lgGiiLI~~G~~iL 184 (190)
T COG1971 148 ILSALGAIIGRKLGKFLGKYAEILGGIILIGIGVKIL 184 (190)
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHH
Confidence 3444555555555666677776776766666655443
No 351
>PF12670 DUF3792: Protein of unknown function (DUF3792); InterPro: IPR023804 Members of this family of strongly hydrophobic putative transmembrane protein average about 125 amino acids in length and occur mostly, but not exclusively, in the Firmicutes. Members are quite diverse in sequence. Their function is unknown.
Probab=20.62 E-value=4.1e+02 Score=20.61 Aligned_cols=30 Identities=10% Similarity=-0.042 Sum_probs=16.7
Q ss_pred HHHHHhHhHHHHHHHHHhhcCCchHHHHHH
Q 039541 365 FNGLLDIPAYLLTFILIERWSRKSSILTFC 394 (521)
Q Consensus 365 ~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~ 394 (521)
...+...++.+++|+.+-|..++|-...+.
T Consensus 42 ~~~~i~~ls~~~GG~~a~~~~~~kG~l~G~ 71 (116)
T PF12670_consen 42 LVVIIYILSVFIGGFYAGRKAGSKGWLHGL 71 (116)
T ss_pred HHHHHHHHHHHHHHHHHHHHHccchHHHHH
Confidence 333555666677777766654444444443
No 352
>PF11023 DUF2614: Protein of unknown function (DUF2614); InterPro: IPR020912 This entry describes proteins of unknown function, which are thought to be membrane proteins.; GO: 0005887 integral to plasma membrane
Probab=20.47 E-value=4.1e+02 Score=20.52 Aligned_cols=6 Identities=0% Similarity=0.058 Sum_probs=2.2
Q ss_pred cCCchH
Q 039541 384 WSRKSS 389 (521)
Q Consensus 384 ~g~~~~ 389 (521)
+.+-|.
T Consensus 8 iN~~R~ 13 (114)
T PF11023_consen 8 INKIRT 13 (114)
T ss_pred HHHHHH
Confidence 333333
No 353
>PF11368 DUF3169: Protein of unknown function (DUF3169); InterPro: IPR021509 Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently there is no known function.
Probab=20.23 E-value=6.5e+02 Score=22.73 Aligned_cols=24 Identities=4% Similarity=-0.221 Sum_probs=14.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHh
Q 039541 207 GQVVIIGFTFFSFGLVSLPAVAYL 230 (521)
Q Consensus 207 g~~~~~~~~~~~~G~~i~~~i~~~ 230 (521)
.+.....-.+..+|.++|...+..
T Consensus 9 ~~~~~~illg~~iGg~~G~~~~~~ 32 (248)
T PF11368_consen 9 LRFLLLILLGGLIGGFIGFFIGRI 32 (248)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455555666666677776666433
Done!