Query 039556
Match_columns 515
No_of_seqs 334 out of 2708
Neff 7.0
Searched_HMMs 29240
Date Mon Mar 25 18:44:44 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/039556.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/039556hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3i6s_A Subtilisin-like proteas 100.0 9.6E-89 3.3E-93 754.6 38.6 413 84-511 193-645 (649)
2 3vta_A Cucumisin; subtilisin-l 100.0 3.3E-79 1.1E-83 677.8 36.4 393 84-510 185-619 (621)
3 1xf1_A C5A peptidase, SCP; hyd 100.0 1.2E-51 4.2E-56 474.9 29.5 357 84-511 178-606 (926)
4 3afg_A Subtilisin-like serine 100.0 9.9E-30 3.4E-34 277.0 14.9 118 225-360 301-418 (539)
5 1y9z_A Alkaline serine proteas 99.9 1E-27 3.5E-32 255.5 13.3 152 143-381 273-437 (441)
6 2z2z_A TK-subtilisin precursor 99.9 8.8E-28 3E-32 252.5 5.4 100 224-359 279-391 (395)
7 3t41_A Epidermin leader peptid 99.9 3.2E-26 1.1E-30 245.7 10.1 103 224-360 340-465 (471)
8 2p4e_P Proprotein convertase s 99.9 1.1E-26 3.9E-31 256.4 4.6 271 16-326 109-422 (692)
9 3lxu_X Tripeptidyl-peptidase 2 99.9 1.7E-23 5.7E-28 242.4 17.9 222 231-510 417-652 (1354)
10 1r6v_A Subtilisin-like serine 99.9 1.2E-24 4.1E-29 241.0 6.9 119 232-371 327-450 (671)
11 1gci_A Subtilisin; hydrolase, 99.8 2.4E-21 8.2E-26 193.3 9.4 98 225-359 172-269 (269)
12 1r0r_E Subtilisin carlsberg; h 99.8 4.6E-21 1.6E-25 191.7 8.3 98 225-359 177-274 (274)
13 4h6x_A Thiazoline oxidase/subt 99.8 7.6E-21 2.6E-25 197.1 9.9 109 223-359 225-337 (357)
14 2iy9_A SUBA; toxin, shiga, pla 99.8 7.8E-21 2.7E-25 196.1 9.7 96 230-359 226-328 (347)
15 1to2_E Subtilisin BPN'; serine 99.8 6.8E-21 2.3E-25 191.2 8.9 99 225-360 178-276 (281)
16 2ixt_A 36KDA protease; serine 99.8 1.4E-19 4.7E-24 183.8 13.7 104 232-354 202-309 (310)
17 1dbi_A AK.1 serine protease; h 99.8 6.1E-20 2.1E-24 184.1 10.9 98 224-359 182-279 (280)
18 2x8j_A Intracellular subtilisi 99.8 4.5E-20 1.6E-24 189.1 8.5 100 224-359 206-310 (327)
19 1wmd_A Protease; alpha-beta hy 99.8 4.5E-20 1.5E-24 196.0 7.1 116 230-361 199-319 (434)
20 3zxy_A Subtilisin-like protein 99.8 6.2E-20 2.1E-24 184.0 7.6 107 224-359 164-274 (282)
21 1thm_A Thermitase; hydrolase(s 99.8 1.9E-19 6.5E-24 180.4 10.7 97 225-359 182-278 (279)
22 2z30_A TK-subtilisin; thermoco 99.8 1E-19 3.4E-24 185.9 8.7 99 225-359 205-316 (320)
23 4h6w_A N-terminal cyanobactin 99.8 4E-20 1.4E-24 187.3 3.9 106 225-359 178-287 (306)
24 3lpc_A APRB2; protease, subtil 99.8 2E-19 6.8E-24 184.8 8.2 108 225-360 226-337 (340)
25 1sh7_A Extracellular subtilisi 99.7 5.7E-18 1.9E-22 170.2 11.2 82 224-327 176-257 (284)
26 2pwa_A Proteinase K; structure 99.7 5.3E-18 1.8E-22 170.0 10.1 80 224-326 180-259 (279)
27 2oxa_A Extracellular serine pr 99.7 6E-18 2E-22 186.7 10.7 128 224-360 258-425 (600)
28 4dzt_A Aqualysin-1, aqualysin- 99.7 1.1E-17 3.6E-22 167.3 10.5 84 224-327 176-259 (276)
29 2b6n_A Proteinase K; S binding 99.7 1.6E-17 5.6E-22 166.2 10.1 83 224-326 178-260 (278)
30 2qtw_B Proprotein convertase s 99.7 2.1E-17 7.1E-22 178.2 11.3 112 226-359 186-313 (546)
31 1p8j_A Furin precursor; prohor 99.7 2.8E-17 9.7E-22 176.3 6.7 121 224-360 210-330 (471)
32 3f7m_A Alkaline serine proteas 99.7 6.7E-17 2.3E-21 161.7 8.3 81 224-327 181-261 (279)
33 2id4_A Kexin; KEX2, kexin, fur 99.7 5E-17 1.7E-21 175.7 7.9 115 224-360 223-342 (503)
34 3hjr_A Extracellular serine pr 99.6 3.8E-16 1.3E-20 172.2 8.5 127 224-359 258-424 (600)
35 3cnq_P Subtilisin BPN'; unclea 99.1 6.6E-11 2.3E-15 95.8 5.5 48 15-63 33-80 (80)
36 2w2n_P Proprotein convertase s 98.9 7.4E-10 2.5E-14 95.9 4.9 45 14-58 69-113 (114)
37 1ga6_A Serine-carboxyl protein 98.8 4E-09 1.4E-13 109.5 6.1 111 234-359 235-363 (372)
38 1t1e_A Kumamolisin; proenzyme, 98.7 6.4E-09 2.2E-13 113.3 5.9 95 247-359 435-541 (552)
39 2qtw_A Proprotein convertase s 98.7 8.3E-09 2.8E-13 90.6 4.9 44 15-58 80-123 (124)
40 3icu_A E3 ubiquitin-protein li 98.6 1.3E-07 4.6E-12 88.9 9.6 76 143-221 104-186 (194)
41 1v5i_B POIA1, IA-1=serine prot 98.6 3.1E-08 1.1E-12 79.4 4.1 43 16-58 30-75 (76)
42 2z30_B TK-subtilisin; thermoco 97.6 4.5E-05 1.5E-09 58.9 4.6 44 14-58 21-64 (65)
43 2ek8_A Aminopeptidase; metallo 96.3 0.0089 3.1E-07 62.5 8.9 65 142-209 113-182 (421)
44 2ys4_A Hydrocephalus-inducing 96.3 0.024 8.2E-07 48.7 9.8 74 418-506 41-114 (122)
45 1y9z_A Alkaline serine proteas 96.1 0.01 3.5E-07 62.4 7.8 35 224-266 177-211 (441)
46 3iib_A Peptidase M28; YP_92679 95.4 0.047 1.6E-06 57.5 9.8 78 141-220 126-225 (444)
47 3kas_A Transferrin receptor pr 95.3 0.025 8.5E-07 62.4 7.3 65 142-209 130-230 (640)
48 3fed_A Glutamate carboxypeptid 95.2 0.018 6.2E-07 64.2 6.0 66 142-210 153-268 (707)
49 3edy_A Tripeptidyl-peptidase 1 95.2 0.011 3.8E-07 64.0 4.0 46 247-306 427-472 (544)
50 3qbt_B Inositol polyphosphate 90.1 2.1 7.2E-05 37.5 10.3 91 418-512 43-139 (140)
51 2e6j_A Hydin protein; PAPD, st 89.7 1.6 5.5E-05 36.0 8.9 56 418-474 26-82 (112)
52 2r39_A FIXG-related protein; s 86.0 4.1 0.00014 34.4 9.2 54 419-474 32-85 (118)
53 3qis_A Inositol polyphosphate 82.6 11 0.00037 38.3 12.3 91 418-512 46-142 (366)
54 2qsv_A Uncharacterized protein 80.7 8.9 0.00031 35.9 10.1 82 418-509 19-104 (220)
55 3idu_A Uncharacterized protein 66.2 27 0.00091 29.9 8.6 51 418-472 33-84 (127)
56 2qsv_A Uncharacterized protein 65.4 58 0.002 30.1 11.6 54 418-474 134-187 (220)
57 3zyz_A Beta-D-glucoside glucoh 63.2 30 0.001 38.3 10.5 55 418-474 613-675 (713)
58 2x41_A Beta-glucosidase; hydro 56.9 29 0.001 38.5 9.0 71 402-474 597-678 (721)
59 1w8o_A Bacterial sialidase; 3D 56.6 79 0.0027 33.5 12.3 64 404-474 363-427 (601)
60 2kq1_A BH0266 protein; solutio 49.9 3.9 0.00013 34.6 0.3 54 420-473 55-110 (119)
61 1z9l_A Vesicle-associated memb 48.4 68 0.0023 27.0 8.2 53 418-473 27-79 (128)
62 3isy_A Bsupi, intracellular pr 48.4 1.1E+02 0.0038 25.8 9.3 54 418-472 18-88 (120)
63 1wic_A Hypothetical protein ri 48.1 49 0.0017 29.1 7.4 52 419-473 36-87 (152)
64 1m1s_A WR4; structural genomic 47.7 67 0.0023 27.0 7.8 50 421-473 26-75 (116)
65 3abz_A Beta-glucosidase I; gly 47.5 51 0.0017 37.3 9.1 71 401-473 716-798 (845)
66 1row_A SSP-19, MSP-domain prot 47.3 76 0.0026 26.2 8.0 50 421-473 18-67 (109)
67 1msp_A MSP, major sperm protei 43.6 76 0.0026 26.8 7.7 52 419-473 26-77 (126)
68 3q48_A Chaperone CUPB2; IG fol 42.0 1E+02 0.0035 29.5 9.1 54 419-473 43-104 (257)
69 3sd2_A Putative member of DUF3 41.9 1.4E+02 0.0049 24.4 8.6 66 407-493 35-100 (101)
70 2cri_A Vesicle-associated memb 41.8 86 0.003 27.1 7.9 52 419-473 32-83 (147)
71 2bp3_A Filamin A; structural p 30.7 1.4E+02 0.0046 23.6 6.8 66 426-511 29-94 (97)
72 4ay0_A Chaperone protein CAF1M 30.0 1.7E+02 0.0059 27.1 8.4 55 418-473 26-85 (218)
73 3rfr_A PMOB; membrane, oxidore 29.7 89 0.003 31.9 6.5 49 418-472 298-368 (419)
74 2l0d_A Cell surface protein; s 29.0 2.2E+02 0.0075 23.6 8.0 24 418-441 19-43 (114)
75 2k9u_A Gamma filamin; cytoskel 28.9 2E+02 0.0069 23.6 7.9 67 425-511 40-106 (119)
76 2xg5_A PAPD, chaperone protein 28.5 2.2E+02 0.0075 26.3 8.8 53 419-472 15-73 (218)
77 3afg_A Subtilisin-like serine 28.3 18 0.0006 38.8 1.2 44 16-60 60-114 (539)
78 1wgl_A TOLL-interacting protei 26.5 49 0.0017 24.4 3.0 32 293-324 6-37 (59)
79 4djm_A DRAB; chaperone, PILI; 24.9 2.3E+02 0.0079 26.6 8.4 51 419-472 37-92 (239)
80 1klf_A FIMC chaperone, chapero 23.4 2.8E+02 0.0096 25.3 8.5 53 419-472 15-72 (205)
81 3cfu_A Uncharacterized lipopro 23.1 1.7E+02 0.0058 25.7 6.6 56 419-475 48-115 (159)
82 2co7_B SAFB chaperone, putativ 22.9 2.3E+02 0.0078 26.3 7.8 53 419-472 27-82 (221)
83 2l04_A Major tail protein V; b 22.4 66 0.0023 25.7 3.4 27 447-474 8-34 (91)
84 2ixt_A 36KDA protease; serine 21.9 32 0.0011 33.4 1.7 25 84-108 157-181 (310)
85 2ee6_A Filamin-B; beta-sandwic 21.7 1.4E+02 0.0049 23.9 5.4 60 433-512 41-100 (105)
86 2ofk_A 3-methyladenine DNA gly 21.7 13 0.00045 34.0 -1.1 29 20-48 54-86 (183)
87 2w0p_A Filamin-A; alternative 21.4 1.4E+02 0.0048 23.4 5.2 58 434-511 34-91 (94)
88 2jg6_A DNA-3-methyladenine gly 20.9 14 0.00049 33.9 -1.1 30 19-48 53-86 (186)
No 1
>3i6s_A Subtilisin-like protease; PA-domain, FN3-domain, hydrolase; HET: NAG FUC; 2.50A {Solanum lycopersicum} PDB: 3i74_A*
Probab=100.00 E-value=9.6e-89 Score=754.63 Aligned_cols=413 Identities=41% Similarity=0.592 Sum_probs=361.4
Q ss_pred eecceEEeecCCCCCCCCceeeecc--------ccccceeeeEEEecCCeEEEeeeeecC-CCCC---------------
Q 039556 84 IEERIFAECSAGNLGPDAYSIFNGA--------LGLQRELAVRITLGNRELTVTGQSVYP-ENLF--------------- 139 (515)
Q Consensus 84 ~~~GI~vv~sAGN~Gp~~~tv~n~a--------~t~dr~~~~~~~lg~g~~~i~G~s~~~-~~~~--------------- 139 (515)
+++||+|++||||+|+...++.+.+ +++||.|++.+.+|+|+. +.|.+++. ....
T Consensus 193 ~~~Gi~vV~AAGN~G~~~~t~~~~ap~vitVgAst~dr~f~~~~~lgng~~-~~g~sl~~~~~~~~~~plv~~~~~~~C~ 271 (649)
T 3i6s_A 193 MMKGVLVSASAGNRGPGIGSLNNGSPWILCVASGHTDRTFAGTLTLGNGLK-IRGWSLFPARAFVRDSPVIYNKTLSDCS 271 (649)
T ss_dssp HHTTCEEEEECCSCTTSTTCCSCCCTTSEEEEEEECSCEEEEEEEETTSCE-EEEECCCSSCBCEEEEEEECCTTTTTCC
T ss_pred HhCCcEEEEeCCCCCCCCCccCCCCCceEEEeeeecccceeeEEEeCCCcE-EeeeecccCcccCcceeeEecccccccc
Confidence 6899999999999999876655433 789999999999999999 99999876 4100
Q ss_pred ------CCc--cceEEEEeecCCCcchhhhhHHHHHHhcCceeEEEcCCCccccCCCCccCeeecCchhhHHHHHHHhcC
Q 039556 140 ------VSK--ERKYIFCAYDYDGNVTVYQQFKEVQRIGAAGAVFSSDPRQYLSSSNFSMPLVTVNPKDWELVKKYIINT 211 (515)
Q Consensus 140 ------~~~--~GkIvlc~~~~g~~~~~~k~~~~v~~aGa~gvi~~n~~g~~~~~~~~~~P~~~i~~~~g~~l~~~~~s~ 211 (515)
... .||||+| +||.|.+.+| .++++++|++|||++|+. .....+.+.+|+++++.++|+.|++|++++
T Consensus 272 ~~~l~~~~vdl~GkIvlc--~~g~~~~~~k-~~~~~~~Ga~g~i~~n~~-~~~~~~~~~~P~~~v~~~~g~~i~~yi~s~ 347 (649)
T 3i6s_A 272 SEELLSQVENPENTIVIC--DDNGDFSDQM-RIITRARLKAAIFISEDP-GVFRSATFPNPGVVVNKKEGKQVINYVKNS 347 (649)
T ss_dssp CHHHHTTSSSGGGCEEEE--CCCSCHHHHH-HHHHHHTCSEEEEECCCG-GGGGCCCCCSCEEEECHHHHHHHHHHHHTC
T ss_pred cccccccccccCCcEEEE--eCCCccHHHH-HHHHHhcCceEEEEecCc-cccccccCcCCEEEEcHHHHHHHHHHHhcC
Confidence 112 5999999 9999999999 999999999999999975 334456789999999999999999999999
Q ss_pred CCceEEEEeceeeecccCCCeeeecCCCCCCCCCCCCCCCceEeCCCcEEeeeCCCCCCCCCCCCC-ccccceEEecCcc
Q 039556 212 ENASVSIKFQITKLGTKRAPQVAYFSSRGPDSQPPWILKPDILAPGVDILAAWVPNRPVKPIRKSD-YLFSDYALMSGTS 290 (515)
Q Consensus 212 ~~~~~~i~~~~t~~~~~~~~~va~fSs~Gp~~~~~~~lKPdi~APG~~I~sa~~~~~~~~~~~~~~-~~~~~~~~~SGTS 290 (515)
.+++++|.+..++.+..+++.++.||||||+.+.+++|||||+|||++|+++|+..........+. +. ..|.++||||
T Consensus 348 ~~~~a~i~~~~t~~~~~~~~~va~FSSrGP~~~~~~ilKPDI~APG~~Ilsa~~~~~~~~~~~~d~~~~-~~y~~~SGTS 426 (649)
T 3i6s_A 348 VTPTATITFQETYLDTKPAPVVAASSARGPSRSYLGISKPDILAPGVLILAAYPPNVFATSIGTNILLS-TDYILESGTS 426 (649)
T ss_dssp SSCEEEEEEEEEECCCSSCCEECTTSCCSSCTTCTTSCSCCEEEECSSEEEECCTTSCCEEETTTEEEC-CSEEEECSHH
T ss_pred CCceEEEeecceeeccCCCCcccccCCCCCCCCCCCccCCeEEeCCCCeEeecCCCCCccccccccccc-cceecccccc
Confidence 999999999999988889999999999999998899999999999999999999865433333332 33 6899999999
Q ss_pred cchhHHHHHHHHHHhhCCCCCHHHHHHHHHhccccccCCCCcccccCCCCCCCCCCCCCCccCccccCCCCccccCCchh
Q 039556 291 ISCPHVAGIAALLKAMQRDWSSAAIRSAMMTTAYLLDNANSTITDIRIGVSGTPLDFGSGHVNPNKAMDPGLVYDIEVQD 370 (515)
Q Consensus 291 mAaPhVAG~aALl~~~~p~~s~~~i~~~L~~tA~~~~~~~~~~~~~~~~~~~~~~~~GaG~vn~~~A~~pglvyd~~~~d 370 (515)
||||||||+||||||+||+|+|++||++||+||+++++.++++++...+.++++|+||+|+|||.+|++||||||++.+|
T Consensus 427 MAaPhVAGvaALlks~~P~~Spa~IksaLmtTA~~~~~~g~~i~~~~~~~~a~~~~~GaG~vn~~~A~~pGLvyd~~~~d 506 (649)
T 3i6s_A 427 MAAPHAAGIAAMLKAAHPEWSPSAIRSAMMTTADPLDNTRKPIKDSDNNKAATPLDMGAGHVDPNRALDPGLVYDATPQD 506 (649)
T ss_dssp HHHHHHHHHHHHHHHHSTTCCHHHHHHHHHHTCBCBCTTSSBCEETTTSSBCCHHHHTTCBCCHHHHTCCSEECCCCHHH
T ss_pred cccHHHHHHHHHHHHhCCCCCHHHHHHHHhcccccccCCCCcccccccCCcCCcCCCCeeeeCHHHhcCccccccCCchh
Confidence 99999999999999999999999999999999999999999998876678899999999999999999999999999999
Q ss_pred HHHhhhhcCCCcceeEEeecccccc--cCCCCCCCCCCcEEEEe-cCCCCce--EEEEEEEEeccCCCeeeEEEEECCCC
Q 039556 371 YINYLCALNYTSLQIRVLTGTSNFT--CENANLDLNYPSFMIIL-NNTKSAS--FTFKWVLTNVDDTSSVNTAAVKAPAG 445 (515)
Q Consensus 371 y~~flc~~~~~~~~i~~~~~~~~~~--c~~~~~~lN~PSi~~~~-~~~~~~~--~t~~rtvtNvg~~~~tY~~~v~~p~g 445 (515)
|++|||++||+.++|+.|++ ..++ |...+.+||||||++.+ +...... ++|+|||||||+.+++|+++++.|.|
T Consensus 507 y~~flc~~~y~~~~i~~~~~-~~~~~~C~~~~~~lNyPs~~~~~~~~~~~~~~~~~~~Rtvtnvg~~~~~y~~~v~~p~g 585 (649)
T 3i6s_A 507 YVNLLCSLNFTEEQFKTIAR-SSASHNCSNPSADLNYPSFIALYSIEGNFTLLEQKFKRTVTNVGKGAATYKAKLKAPKN 585 (649)
T ss_dssp HHHHHHTTCCCHHHHHHHHT-TTSCC-CCCCCCCCCCSSEEEEECCSSCCCCEEEEEEEEEEECC--CEEEEEEEECCTT
T ss_pred HHHhhhcCCCCcccceeeec-CCCcCCCCCchhhcCCCcEEeecccCCCCccceEEEEEEEEEeCCCCcEEEEEEecCCC
Confidence 99999999999999999988 4566 96566799999999987 3211012 89999999999999999999999999
Q ss_pred cEEEEecceEEEecCCcEEEEEEEEEecccccccCCCCCcceEEEEEEEeeC--CeeEEEeEEEEEEe
Q 039556 446 MKVVVQPETATFDRKYSKAEFNLTLSIDLGITVSPKCNYLGNFGYLTWHENI--GKHMVRSPIVSAFA 511 (515)
Q Consensus 446 ~~v~v~P~~l~~~~~g~~~~~~Vt~~~~~~~~~~~~~~~~~~~G~i~~~~~~--~~~~vr~P~~v~~~ 511 (515)
++|+|+|++|+|++.+|+++|+|||+.... .. + .|.||+|+| ++ ++|.||+||+|+..
T Consensus 586 ~~v~v~P~~l~f~~~~~~~~f~v~~~~~~~----~~-~-~~~fg~l~w--~~~~~~h~vrsPi~v~~~ 645 (649)
T 3i6s_A 586 STISVSPQILVFKNKNEKQSYTLTIRYIGD----EG-Q-SRNVGSITW--VEQNGNHSVRSPIVTSPI 645 (649)
T ss_dssp EEEEEESSEEEECC-CCEEEEEEEEEECCC---------CCCEEEEEE--EETTSCCEEEEEEEEEEC
T ss_pred CEEEEECCEEEEecCCCEEEEEEEEEeccc----CC-C-ceEEEEEEE--EcCCCCeEEEEeEEEEEc
Confidence 999999999999889999999999998742 23 4 689999999 66 89999999999875
No 2
>3vta_A Cucumisin; subtilisin-like fold, serine protease, hydrolase; HET: DFP NAG FUC BMA MAN; 2.75A {Cucumis melo}
Probab=100.00 E-value=3.3e-79 Score=677.84 Aligned_cols=393 Identities=33% Similarity=0.551 Sum_probs=311.5
Q ss_pred eecceEEeecCCCCCCCCceeeecc--------ccccceeeeEEEecCCeEEEeeeeecC-CC--C--------C-----
Q 039556 84 IEERIFAECSAGNLGPDAYSIFNGA--------LGLQRELAVRITLGNRELTVTGQSVYP-EN--L--------F----- 139 (515)
Q Consensus 84 ~~~GI~vv~sAGN~Gp~~~tv~n~a--------~t~dr~~~~~~~lg~g~~~i~G~s~~~-~~--~--------~----- 139 (515)
+++||+|++||||+|+...++.+.+ +++||.|...+.++++.. +.|.+++. .. . .
T Consensus 185 ~~~Gi~vv~aAGN~g~~~~t~~~~a~~~~~v~ast~d~~~~~~~~~~~~~~-~~~~s~~~~~~~~~~~~~~~~~~~~~~~ 263 (621)
T 3vta_A 185 VERGILTSNSAGNGGPNFFTTASLSPWLLSVAASTMDRKFVTQVQIGNGQS-FQGVSINTFDNQYYPLVSGRDIPNTGFD 263 (621)
T ss_dssp HTTTCEEEEECCSCCSSTTCCCCCCTTSEEEEEECCSEEEEEEEEETTSCE-EEEBCCCCSCCEEECEEETTTSCCTTCC
T ss_pred HHCCCEEEEeCCCCCCCCcccCCCCCCceeEEEeeccccceeeEEeccCce-eeeeecccCCCccccccccccccccccc
Confidence 6899999999999999888776655 889999999999999988 87776643 11 0 0
Q ss_pred --------------CCccceEEEEeecCCCcchhhhhHHHHHHhcCceeEEEcCCCccccCCCCccCeeecCchhhHHHH
Q 039556 140 --------------VSKERKYIFCAYDYDGNVTVYQQFKEVQRIGAAGAVFSSDPRQYLSSSNFSMPLVTVNPKDWELVK 205 (515)
Q Consensus 140 --------------~~~~GkIvlc~~~~g~~~~~~k~~~~v~~aGa~gvi~~n~~g~~~~~~~~~~P~~~i~~~~g~~l~ 205 (515)
....|||++| +++.. .+ ....+.+|+.++|++++... ..+.+.+|++.++.+++..++
T Consensus 264 ~~~~~~~~~~~~~~~~v~gkivl~--~~~~~---~~-~~~~~~~Ga~gvi~~~~~~~--~~~~~~lP~~~v~~~~g~~i~ 335 (621)
T 3vta_A 264 KSTSRFCTDKSVNPNLLKGKIVVC--EASFG---PH-EFFKSLDGAAGVLMTSNTRD--YADSYPLPSSVLDPNDLLATL 335 (621)
T ss_dssp HHHHTTTCTTCSCGGGTTTSEEEC--SSCCC---HH-HHHHHHTTCSEEEEECSCCS--SCCCCSSSEEEECHHHHHHHH
T ss_pred ccccccccccccccccccceEEEE--ecCCC---hh-HHhhhhcceeEEEEEecCCC--cccccccceEEECHHHHHHHH
Confidence 0012999999 76533 44 56677889999999887221 234567999999999999999
Q ss_pred HHHhcCCCceEEEEeceeeecccCCCeeeecCCCCCCCCCCCCCCCceEeCCCcEEeeeCCCCCCCCCCCCCccccceEE
Q 039556 206 KYIINTENASVSIKFQITKLGTKRAPQVAYFSSRGPDSQPPWILKPDILAPGVDILAAWVPNRPVKPIRKSDYLFSDYAL 285 (515)
Q Consensus 206 ~~~~s~~~~~~~i~~~~t~~~~~~~~~va~fSs~Gp~~~~~~~lKPdi~APG~~I~sa~~~~~~~~~~~~~~~~~~~~~~ 285 (515)
.|+.....+.+.+....+ .....++.++.||||||+...+++|||||+|||++|+|+|+....... +.+. ..|.+
T Consensus 336 ~~~~~~~~~~a~~~~~~~-~~~~~~~~va~FSSrGP~~~~~~ilKPDI~APG~~Ilsa~~~~~~~~~---~~~~-~~y~~ 410 (621)
T 3vta_A 336 RYIYSIRSPGATIFKSTT-ILNASAPVVVSFSSRGPNRATKDVIKPDISGPGVEILAAWPSVAPVGG---IRRN-TLFNI 410 (621)
T ss_dssp HHHHHHSSCCEEECCCEE-EECTTCCCBCTTSCCCSCTTCTTSCSCCEEEECSSEEEECCSSSCBTT---BCCC-CSEEE
T ss_pred HHHhccCCcceEEecceE-eccCCCCceeeecCCCCCCCCCCeeccccccCCcceEeecCccccccC---cCCC-CcceE
Confidence 999998888777755444 345678999999999999888899999999999999999987543222 2222 68999
Q ss_pred ecCcccchhHHHHHHHHHHhhCCCCCHHHHHHHHHhccccccCCCCcccccCCCCCCCCCCCCCCccCccccCCCCcccc
Q 039556 286 MSGTSISCPHVAGIAALLKAMQRDWSSAAIRSAMMTTAYLLDNANSTITDIRIGVSGTPLDFGSGHVNPNKAMDPGLVYD 365 (515)
Q Consensus 286 ~SGTSmAaPhVAG~aALl~~~~p~~s~~~i~~~L~~tA~~~~~~~~~~~~~~~~~~~~~~~~GaG~vn~~~A~~pglvyd 365 (515)
|||||||||||||+||||||+||+|+|++||++||+||++++.. ..++.+|+||+|+|||.+|++||||||
T Consensus 411 ~SGTSMAaPhVAGvaALl~q~~P~~spa~IksaLmtTA~~~~~~---------~~~~~~~~~GaG~v~~~~A~~pGLvyd 481 (621)
T 3vta_A 411 ISGTSMSCPHITGIATYVKTYNPTWSPAAIKSALMTTASPMNAR---------FNPQAEFAYGSGHVNPLKAVRPGLVYD 481 (621)
T ss_dssp ECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHTCBCCCTT---------TCTTTHHHHTTCBCCHHHHSCCSEECC
T ss_pred ecCccccchhhhhHHHHHHHHCCCCCHHHHHHHHHhcCCccccc---------CCCCCchhcCCCccCHHHhcCCCeEee
Confidence 99999999999999999999999999999999999999988654 345678999999999999999999999
Q ss_pred CCchhHHHhhhhcCCCcceeEEeecccccccC----CCCCCCCCCcEEEEecCCCCceEEEEEEEEeccCCCeeeEEEEE
Q 039556 366 IEVQDYINYLCALNYTSLQIRVLTGTSNFTCE----NANLDLNYPSFMIILNNTKSASFTFKWVLTNVDDTSSVNTAAVK 441 (515)
Q Consensus 366 ~~~~dy~~flc~~~~~~~~i~~~~~~~~~~c~----~~~~~lN~PSi~~~~~~~~~~~~t~~rtvtNvg~~~~tY~~~v~ 441 (515)
++.+||+.|||.+||+.++|+.+++ ....|. ....+||||||++.+......+++|+|||||||+...||+++++
T Consensus 482 ~~~~dy~~~lc~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~lN~pS~~v~~~~~~~~~~t~~rtvtnvg~~~~ty~~~v~ 560 (621)
T 3vta_A 482 ANESDYVKFLCGQGYNTQAVRRITG-DYSACTSGNTGRVWDLNYPSFGLSVSPSQTFNQYFNRTLTSVAPQASTYRAMIS 560 (621)
T ss_dssp CCGGGCC------------------------------CGGGSCCSSEEEECCSSCCEEEEEEEEEEECSSSCEEEEEEEE
T ss_pred cccchhhhhhcccCCCchhheeeec-cccccCCCCcCcccccccccEEEEccCCCceEEEEEEEEEccCCCCeEEEEEEE
Confidence 9999999999999999999999987 456675 34579999999998654344789999999999999999999999
Q ss_pred CCCCcEEEEecceEEEecCCcEEEEEEEEEecccccccCCCCCcceEEEEEEEeeCCeeEEEeEEEEEE
Q 039556 442 APAGMKVVVQPETATFDRKYSKAEFNLTLSIDLGITVSPKCNYLGNFGYLTWHENIGKHMVRSPIVSAF 510 (515)
Q Consensus 442 ~p~g~~v~v~P~~l~~~~~g~~~~~~Vt~~~~~~~~~~~~~~~~~~~G~i~~~~~~~~~~vr~P~~v~~ 510 (515)
+|+|++|+|+|++|+|++.||+++|+|||+... . + .|+||+|+| +|++|.||+||+|+.
T Consensus 561 ~p~gv~v~V~P~~l~f~~~~~~~~~~vt~~~~~------~-~-~~~~g~l~w--~d~~h~Vr~Pi~v~~ 619 (621)
T 3vta_A 561 APQGLTISVNPNVLSFNGLGDRKSFTLTVRGSI------K-G-FVVSASLVW--SDGVHYVRSPITITS 619 (621)
T ss_dssp CCSSEEEEEESSEEEECSTTCEEEEEEEEEECC------C-S-SEEEEEEEE--ECSSCCCEEEEEEEC
T ss_pred CCCCcEEEEecCEEEEcCCCcEEEEEEEEEecC------C-C-ceEEEEEEE--EcCCEEEEeCEEEEE
Confidence 999999999999999998999999999998653 2 4 789999999 899999999999975
No 3
>1xf1_A C5A peptidase, SCP; hydrolase; HET: CIT; 1.90A {Streptococcus pyogenes} PDB: 3eif_A*
Probab=100.00 E-value=1.2e-51 Score=474.88 Aligned_cols=357 Identities=21% Similarity=0.238 Sum_probs=269.5
Q ss_pred eecceEEeecCCCCCCC-------------Cceeeecc----------ccccceeeeEEEe-cCCeEEEeeeeecC-CCC
Q 039556 84 IEERIFAECSAGNLGPD-------------AYSIFNGA----------LGLQRELAVRITL-GNRELTVTGQSVYP-ENL 138 (515)
Q Consensus 84 ~~~GI~vv~sAGN~Gp~-------------~~tv~n~a----------~t~dr~~~~~~~l-g~g~~~i~G~s~~~-~~~ 138 (515)
+++||+|++||||+|+. ..++.+++ .+.+|.+...+.+ +++.. ..+.+++. ..+
T Consensus 178 ~~~GilvV~AAGN~G~~g~~~~~~~~~~p~~~tv~~PA~~~~vitVgA~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 256 (926)
T 1xf1_A 178 KSKGVSIVTSAGNDSSFGGKTRLPLADHPDYGVVGTPAAADSTLTVASYSPDKQLTETVRVKTADQQ-DKEMPVLSTNRF 256 (926)
T ss_dssp HHTTCEEEEECCSCCBTTCTTSCCBTTCCCCBCCCSCTTTCCSEEEEEEBCSEEEEEEEEEECTTSC-EEEEEEEEESCC
T ss_pred HhCCcEEEEeCCCCCCcCCccccccccCCCcceecCcccCCceEEEeccccccccccceEEEcCCCc-ceeeEEEecCCC
Confidence 68999999999999962 23444443 5667878777776 55433 33333321 110
Q ss_pred C-------------------CCccceEEEEeecCCCcchhhhhHHHHHHhcCceeEEEcC-CCcc--ccCCCCccCeeec
Q 039556 139 F-------------------VSKERKYIFCAYDYDGNVTVYQQFKEVQRIGAAGAVFSSD-PRQY--LSSSNFSMPLVTV 196 (515)
Q Consensus 139 ~-------------------~~~~GkIvlc~~~~g~~~~~~k~~~~v~~aGa~gvi~~n~-~g~~--~~~~~~~~P~~~i 196 (515)
. ....||||+| +||.|.+.+| ..+++++||.|||++|+ .+.. .......+|++++
T Consensus 257 ~~~~~~~lv~~~~g~~~~~~~~v~Gkivl~--~rg~~~~~~k-~~~~~~~Ga~gvi~~n~~~~~~~~~~~~~~~iP~~~i 333 (926)
T 1xf1_A 257 EPNKAYDYAYANRGTKEDDFKDVKGKIALI--ERGDIDFKDK-IAKAKKAGAVGVLIYDNQDKGFPIELPNVDQMPAAFI 333 (926)
T ss_dssp CTTCCEEEEECTTSCSTTTTTTCTTSEEEE--ECCSSCHHHH-HHHHHHTTCSEEEEECSSTTCCCEECCCSTTCCEEEE
T ss_pred CCCceEEEEECCCCCCccchhhcCCeEEEE--ECCCCCHHHH-HHHHHhCCCcEEEEEecCCCCcccccCccccccEEEE
Confidence 0 1234999999 9999999999 99999999999999998 3221 1233567999999
Q ss_pred CchhhHHHHHHHhcCCCceEEEEeceee--ecccCCCeeeecCCCCCCCCCCCCCCCceEeCCCcEEeeeCCCCCCCCCC
Q 039556 197 NPKDWELVKKYIINTENASVSIKFQITK--LGTKRAPQVAYFSSRGPDSQPPWILKPDILAPGVDILAAWVPNRPVKPIR 274 (515)
Q Consensus 197 ~~~~g~~l~~~~~s~~~~~~~i~~~~t~--~~~~~~~~va~fSs~Gp~~~~~~~lKPdi~APG~~I~sa~~~~~~~~~~~ 274 (515)
+.++|..|+. ++.++|++..+. ......+.++.||||||+. +++|||||+|||++|+++|++
T Consensus 334 ~~~~g~~l~~------~~~~ti~~~~~~~~~~~~~~~~~a~FSSrGp~~--~~~lKPDI~APG~~I~sa~~~-------- 397 (926)
T 1xf1_A 334 SRKDGLLLKD------NPQKTITFNATPKVLPTASGTKLSRFSSWGLTA--DGNIKPDIAAPGQDILSSVAN-------- 397 (926)
T ss_dssp CHHHHHHHHH------CSSCEEEECSSCEEEECSSCSBCCTTSCCCBCT--TSCBSCCEEEECCCEEESSSC--------
T ss_pred eHHHHHHHHh------CCceEEEecccceecccCCcceeccccCCCCCC--CCccCceEECCCCCEEeeccC--------
Confidence 9999998874 234566666543 4455688999999999986 589999999999999999987
Q ss_pred CCCccccceEEecCcccchhHHHHHHHHHH----hhCCCCCHHH----HHHHHHhccccccCCCCcccccCCCCCCCCCC
Q 039556 275 KSDYLFSDYALMSGTSISCPHVAGIAALLK----AMQRDWSSAA----IRSAMMTTAYLLDNANSTITDIRIGVSGTPLD 346 (515)
Q Consensus 275 ~~~~~~~~~~~~SGTSmAaPhVAG~aALl~----~~~p~~s~~~----i~~~L~~tA~~~~~~~~~~~~~~~~~~~~~~~ 346 (515)
+.|..+||||||||||||+||||+ +.||+|+|+| ||++||+||++++..+ ....+++++
T Consensus 398 ------~~y~~~SGTSMAaPhVAG~aALl~q~~k~~~P~~sp~~~~~~Iks~L~~TA~~~~~~~-------~~~~~~~~~ 464 (926)
T 1xf1_A 398 ------NKYAKLSGTSMSAPLVAGIMGLLQKQYETQYPDMTPSERLDLAKKVLMSSATALYDED-------EKAYFSPRQ 464 (926)
T ss_dssp ------SSSCEEESCTTHHHHHHHHHHHHHHHHHHSSSSSHHHHHHHHHHHHHHHHSBCCEEGG-------GTEECCHHH
T ss_pred ------CcceecCccchhHHHHHHHHHHHHHHHhccCCCCCHHHHHHHHHHHHHhcCCCcccCC-------CCccCChhc
Confidence 689999999999999999999995 5699999997 9999999999875321 123467889
Q ss_pred CCCCccCccccCCCCccccCCchhHHHhhhhcCCCcceeEEeecccccccCCCCCCCCCCcEEEEecCCCCceEEEEEEE
Q 039556 347 FGSGHVNPNKAMDPGLVYDIEVQDYINYLCALNYTSLQIRVLTGTSNFTCENANLDLNYPSFMIILNNTKSASFTFKWVL 426 (515)
Q Consensus 347 ~GaG~vn~~~A~~pglvyd~~~~dy~~flc~~~~~~~~i~~~~~~~~~~c~~~~~~lN~PSi~~~~~~~~~~~~t~~rtv 426 (515)
||+|+||+.+|++|.+ |||..++...+ |.+... . ..++++|||
T Consensus 465 ~G~G~vn~~~A~~~~~-----------~l~~~~~~~~~-----------------------i~l~~~--~-~~~~~~~tv 507 (926)
T 1xf1_A 465 QGAGAVDAKKASAATM-----------YVTDKDNTSSK-----------------------VHLNNV--S-DKFEVTVNV 507 (926)
T ss_dssp HTTCBCCHHHHHHCSE-----------EEEESSSSCSC-----------------------EEEEEE--C-SEEEEEEEE
T ss_pred cCCCccCHHHhcCCCe-----------EEEcCCCCcce-----------------------eecccc--C-ccEEEEEEE
Confidence 9999999999999864 68887654432 222222 1 478899999
Q ss_pred EeccCC--CeeeEEEEEC--CCCcEEEEecceEEEecC-------CcEEEEEEEEEecccc-ccc--CCCCCcceEEEEE
Q 039556 427 TNVDDT--SSVNTAAVKA--PAGMKVVVQPETATFDRK-------YSKAEFNLTLSIDLGI-TVS--PKCNYLGNFGYLT 492 (515)
Q Consensus 427 tNvg~~--~~tY~~~v~~--p~g~~v~v~P~~l~~~~~-------g~~~~~~Vt~~~~~~~-~~~--~~~~~~~~~G~i~ 492 (515)
||+|+. ..+|++.+.. |.+..++|.|..|.|..+ ||+++|+|||++.... .+. ..++ .|+||+|+
T Consensus 508 ~N~g~~~~~~~y~~~v~~~~~~~~~~~v~p~~l~~~~~~~vtv~ag~~~~~~vt~~~~~~~~~~~~~~~~~-~~~~G~i~ 586 (926)
T 1xf1_A 508 HNKSDKPQELYYQATVQTDKVDGKHFALAPKVLYETSWQKITIPANSSKQVTVPIDASRFSKDLLAQMKNG-YFLEGFVR 586 (926)
T ss_dssp EECSSSCEEEEEEEEEEEEEEETTEEEEEEEEEEECCCEEEEECTTEEEEEEEEEECHHHHHHHHHHSTTC-EEEEEEEE
T ss_pred EEeCCCceeEEEEEEEEeccCCCceEEeccceeEeccCCeEEECCCCEEEEEEEEEcCccchhhcccccCC-cEEEEEEE
Confidence 999985 4678888765 678999999887766544 9999999999975210 000 1113 68999999
Q ss_pred EEeeCCeeE-EEeEEEEEEe
Q 039556 493 WHENIGKHM-VRSPIVSAFA 511 (515)
Q Consensus 493 ~~~~~~~~~-vr~P~~v~~~ 511 (515)
|++.++.|. ||+||++...
T Consensus 587 ~~~~~~~~~~v~~P~~~~~g 606 (926)
T 1xf1_A 587 FKQDPTKEELMSIPYIGFRG 606 (926)
T ss_dssp EESSTTSCCCEEEEEEEEES
T ss_pred EEeCCCCCCEEEeeeEEEec
Confidence 943366665 9999999764
No 4
>3afg_A Subtilisin-like serine protease; propeptide, thermococcus kodakaraensis, hydrolas protease; 2.00A {Thermococcus kodakarensis}
Probab=99.96 E-value=9.9e-30 Score=277.02 Aligned_cols=118 Identities=32% Similarity=0.507 Sum_probs=97.0
Q ss_pred ecccCCCeeeecCCCCCCCCCCCCCCCceEeCCCcEEeeeCCCCCCCCCCCCCccccceEEecCcccchhHHHHHHHHHH
Q 039556 225 LGTKRAPQVAYFSSRGPDSQPPWILKPDILAPGVDILAAWVPNRPVKPIRKSDYLFSDYALMSGTSISCPHVAGIAALLK 304 (515)
Q Consensus 225 ~~~~~~~~va~fSs~Gp~~~~~~~lKPdi~APG~~I~sa~~~~~~~~~~~~~~~~~~~~~~~SGTSmAaPhVAG~aALl~ 304 (515)
...+..+.++.||||||... .++||||+|||++|+++++...... +... ..|..+||||||||||||++|||+
T Consensus 301 gA~~~~~~~a~fSs~Gp~~~--~~~kpdi~APG~~I~s~~~~~~~~~----~~~~-~~y~~~sGTSmAaP~VAG~aALl~ 373 (539)
T 3afg_A 301 GAVDKYDVITDFSSRGPTAD--NRLKPEVVAPGNWIIAARASGTSMG----QPIN-DYYTAAPGTAMATPHVAGIAALLL 373 (539)
T ss_dssp EEECTTSCBCSSSCCCCCTT--CBCCCSEEEECSSEEEECCTTCCCS----EECS-SSEEEECSHHHHHHHHHHHHHHHH
T ss_pred eeecCCcccccccCCCCCCC--CCCcccEecCcCCEEeeccCCCCCC----CCCc-ccccccCchHHHHHHHHHHHHHHH
Confidence 34556789999999999874 8899999999999999997532100 0001 369999999999999999999999
Q ss_pred hhCCCCCHHHHHHHHHhccccccCCCCcccccCCCCCCCCCCCCCCccCccccCCC
Q 039556 305 AMQRDWSSAAIRSAMMTTAYLLDNANSTITDIRIGVSGTPLDFGSGHVNPNKAMDP 360 (515)
Q Consensus 305 ~~~p~~s~~~i~~~L~~tA~~~~~~~~~~~~~~~~~~~~~~~~GaG~vn~~~A~~p 360 (515)
++||+|+|++||++|++||+++... ..+.+.||+|+||+.+|++.
T Consensus 374 ~~~p~~s~~~vk~~L~~tA~~~~~~-----------~~~~~~~G~G~vn~~~Al~~ 418 (539)
T 3afg_A 374 QAHPSWTPDKVKTALIETADIVKPD-----------EIADIAYGAGRVNAYKAAYY 418 (539)
T ss_dssp HHCTTCCHHHHHHHHHHHSBCSSGG-----------GCSBTTTBTCBCCHHHHHTG
T ss_pred HHCCCCCHHHHHHHHHhhCccCCCC-----------CCCccCccCCccCHHHHhhh
Confidence 9999999999999999999876421 12456899999999999984
No 5
>1y9z_A Alkaline serine protease; subtilisin-like alpha/beta domain, insert beta barrel domain hydrolase; HET: PMS; 1.40A {Pseudoalteromonas SP} PDB: 1v6c_A* 1wvm_A*
Probab=99.95 E-value=1e-27 Score=255.50 Aligned_cols=152 Identities=24% Similarity=0.333 Sum_probs=121.8
Q ss_pred cceEEEEeecCCCc-----chhhhhHHHHHHhcCceeEEEcCC---Ccc-----ccCCCCccCeeecCchhhHHHHHHHh
Q 039556 143 ERKYIFCAYDYDGN-----VTVYQQFKEVQRIGAAGAVFSSDP---RQY-----LSSSNFSMPLVTVNPKDWELVKKYII 209 (515)
Q Consensus 143 ~GkIvlc~~~~g~~-----~~~~k~~~~v~~aGa~gvi~~n~~---g~~-----~~~~~~~~P~~~i~~~~g~~l~~~~~ 209 (515)
.|||++| +||.| .+.+| ..+++++|++|+|++|+. +.. .......+|++.++.++|..|++|+.
T Consensus 273 ~gkivl~--~rg~~~~~~~~~~~~-~~~~~~aGa~gvii~~~~~~~g~~~~~~~~~~~~~~~p~~~v~~~~g~~l~~~~~ 349 (441)
T 1y9z_A 273 ANKICLV--ERVGNQGSSYPEINS-TKACKTAGAKGIIVYSNSALPGLQNPFLVDANSDITVPSVSVDRATGLALKAKLG 349 (441)
T ss_dssp TTEEEEE--ECCSCSSSSCTHHHH-HHHHHHTTCSEEEEECCTTSCSCCCCEEECTTCCCCSCEEEECHHHHHHHHTTTT
T ss_pred cccEEEE--eccccCcccccHHHH-HHHHHhcCCeEEEEEeCCCccccccccccccccCccccEEEEeHHHHHHHHHHhc
Confidence 4999999 99876 67788 899999999999999872 211 11234679999999999999998764
Q ss_pred cCCCceEEEEeceeeecccCCCeeeecCCCCCCCCCCCCCCCceEeCCCcEEeeeCCCCCCCCCCCCCccccceEEecCc
Q 039556 210 NTENASVSIKFQITKLGTKRAPQVAYFSSRGPDSQPPWILKPDILAPGVDILAAWVPNRPVKPIRKSDYLFSDYALMSGT 289 (515)
Q Consensus 210 s~~~~~~~i~~~~t~~~~~~~~~va~fSs~Gp~~~~~~~lKPdi~APG~~I~sa~~~~~~~~~~~~~~~~~~~~~~~SGT 289 (515)
+. .++ ++... ..|..+|||
T Consensus 350 ~~----~t~-------------------------------------------~~~~~--------------~~y~~~sGT 368 (441)
T 1y9z_A 350 QS----TTV-------------------------------------------SNQGN--------------QDYEYYNGT 368 (441)
T ss_dssp SE----EEE-------------------------------------------EEEEE--------------ESEEEECSH
T ss_pred CC----ccc-------------------------------------------ccccC--------------CCceeeccc
Confidence 21 110 11112 689999999
Q ss_pred ccchhHHHHHHHHHHhhCCCCCHHHHHHHHHhccccccCCCCcccccCCCCCCCCCCCCCCccCccccCCCCccccCCch
Q 039556 290 SISCPHVAGIAALLKAMQRDWSSAAIRSAMMTTAYLLDNANSTITDIRIGVSGTPLDFGSGHVNPNKAMDPGLVYDIEVQ 369 (515)
Q Consensus 290 SmAaPhVAG~aALl~~~~p~~s~~~i~~~L~~tA~~~~~~~~~~~~~~~~~~~~~~~~GaG~vn~~~A~~pglvyd~~~~ 369 (515)
|||||||||++|||+|+||+|+|++||++||+||++++..+ .+.+||+|+||+.+|+
T Consensus 369 SmAaP~VAG~aALl~~~~p~~sp~~ik~~L~~TA~~~~~~g------------~~~~~G~G~vn~~~A~----------- 425 (441)
T 1y9z_A 369 SMATPHVSGVATLVWSYHPECSASQVRAALNATADDLSVAG------------RDNQTGYGMINAVAAK----------- 425 (441)
T ss_dssp HHHHHHHHHHHHHHHHHCTTSCHHHHHHHHHHHSBCCSSSS------------CBTTTBTCBCCHHHHH-----------
T ss_pred ccCCcccchHHHHHHHHCCCCCHHHHHHHHHhhchhhccCC------------CcccccccccCHHHHH-----------
Confidence 99999999999999999999999999999999999875422 2457999999999996
Q ss_pred hHHHhhhhcCCC
Q 039556 370 DYINYLCALNYT 381 (515)
Q Consensus 370 dy~~flc~~~~~ 381 (515)
||+.|||.+++.
T Consensus 426 ~~~~~lc~~~~~ 437 (441)
T 1y9z_A 426 AYLDESCTGPTD 437 (441)
T ss_dssp HHHHHCTTCC--
T ss_pred HHHHhhhcCCCC
Confidence 599999998863
No 6
>2z2z_A TK-subtilisin precursor; thermococcus kodakaraensis, hydrolase; 1.87A {Thermococcus kodakarensis} PDB: 2e1p_A 2zwp_A 2zwo_A
Probab=99.94 E-value=8.8e-28 Score=252.49 Aligned_cols=100 Identities=34% Similarity=0.537 Sum_probs=88.2
Q ss_pred eecccCCCeeeecCCCCCCCCCCCCCCCceEeCCCcEEeeeCCCCCCCCCCCCCccccceEEecCcccchhHHHHHHHHH
Q 039556 224 KLGTKRAPQVAYFSSRGPDSQPPWILKPDILAPGVDILAAWVPNRPVKPIRKSDYLFSDYALMSGTSISCPHVAGIAALL 303 (515)
Q Consensus 224 ~~~~~~~~~va~fSs~Gp~~~~~~~lKPdi~APG~~I~sa~~~~~~~~~~~~~~~~~~~~~~~SGTSmAaPhVAG~aALl 303 (515)
+...+..+.++.|||||| +|+|||++|+++++. +.|..++|||||||||||++|||
T Consensus 279 Vga~~~~~~~a~fS~~G~----------~v~APG~~i~s~~~~--------------~~y~~~sGTS~AaP~VaG~aAll 334 (395)
T 2z2z_A 279 VGAIDSNDNIASFSNRQP----------EVSAPGVDILSTYPD--------------DSYETLMGTAMATPHVSGVVALI 334 (395)
T ss_dssp EEEECTTSCBCTTSCSSC----------SEEEECSSEEEEETT--------------TEEEEEESHHHHHHHHHHHHHHH
T ss_pred EEEecCCCCCCcccCCCC----------CEEeCCCCeeeecCC--------------CceEecCCHHHHHHHHHHHHHHH
Confidence 344567789999999997 579999999999987 68999999999999999999999
Q ss_pred HhhCC-------------CCCHHHHHHHHHhccccccCCCCcccccCCCCCCCCCCCCCCccCccccCC
Q 039556 304 KAMQR-------------DWSSAAIRSAMMTTAYLLDNANSTITDIRIGVSGTPLDFGSGHVNPNKAMD 359 (515)
Q Consensus 304 ~~~~p-------------~~s~~~i~~~L~~tA~~~~~~~~~~~~~~~~~~~~~~~~GaG~vn~~~A~~ 359 (515)
++++| .|++.+||++|++||+++.. +.....+|+|+||+.+|++
T Consensus 335 ~~~~p~~~~~~~~~~~~~~ls~~~v~~~L~~tA~~~~~------------~g~~~~~G~G~vd~~~A~~ 391 (395)
T 2z2z_A 335 QAAYYQKYGKILPVGTFDDISKNTVRGILHITADDLGP------------TGWDADYGYGVVRAALAVQ 391 (395)
T ss_dssp HHHHHHHHSSCCCCCCTTCCSSSSHHHHHHHHSBCCSS------------SSSBTTTBTCBCCHHHHHH
T ss_pred HHhCccccccccccccccCCCHHHHHHHHHhhccccCC------------CCCCCCccCceeCHHHHHH
Confidence 99999 99999999999999987642 1234689999999999986
No 7
>3t41_A Epidermin leader peptide processing serine protea; structural genomics, center for structural genomics of infec diseases, csgid; 1.95A {Staphylococcus aureus} PDB: 3qfh_A
Probab=99.93 E-value=3.2e-26 Score=245.68 Aligned_cols=103 Identities=23% Similarity=0.311 Sum_probs=90.0
Q ss_pred eecccCCCeeeecCCCCCCCCCCCCCCCceEeCCCc----------------------EEeeeCCCCCCCCCCCCCcccc
Q 039556 224 KLGTKRAPQVAYFSSRGPDSQPPWILKPDILAPGVD----------------------ILAAWVPNRPVKPIRKSDYLFS 281 (515)
Q Consensus 224 ~~~~~~~~~va~fSs~Gp~~~~~~~lKPdi~APG~~----------------------I~sa~~~~~~~~~~~~~~~~~~ 281 (515)
+.+....+.++.|||+||.. |||+|||++ |+++++. +
T Consensus 340 VgA~~~~~~~a~fS~~G~~~-------~di~APG~~i~~~~~~g~~~~~~~~~~~~~~i~s~~~~--------------~ 398 (471)
T 3t41_A 340 VGSTDQKSNLSEFSNFGMNY-------TDIAAPGGSFAYLNQFGVDKWMNEGYMHKENILTTANN--------------G 398 (471)
T ss_dssp EEEECTTSSBCTTCCBCTTT-------CCEEEECCCCHHHHHHHHHHHHHTTTHHHHSEEEECTT--------------S
T ss_pred EEeeCCCCCCCCccCCCCCC-------CeEEecCCCcccccccccccccccccccCceeEecCCC--------------C
Confidence 44456778999999999964 499999987 8999876 6
Q ss_pred ceEEecCcccchhHHHHHHHHHHhhCC-CCCHHHHHHHHHhccccccCCCCcccccCCCCCCCCCCCCCCccCccccCCC
Q 039556 282 DYALMSGTSISCPHVAGIAALLKAMQR-DWSSAAIRSAMMTTAYLLDNANSTITDIRIGVSGTPLDFGSGHVNPNKAMDP 360 (515)
Q Consensus 282 ~~~~~SGTSmAaPhVAG~aALl~~~~p-~~s~~~i~~~L~~tA~~~~~~~~~~~~~~~~~~~~~~~~GaG~vn~~~A~~p 360 (515)
.|..++|||||||||||++|||++++| .|+|++||.+|++||.+... .+...+|+|+||+.+|++.
T Consensus 399 ~~~~~sGTS~AaP~VAG~aAll~~~~p~~~~~~~v~~~L~~tA~~~~~-------------~~~~~~G~G~vd~~~Al~~ 465 (471)
T 3t41_A 399 RYIYQAGTALATPKVSGALALIIDKYHLEKHPDKAIELLYQHGTSKNN-------------KPFSRYGHGELDVYKALNV 465 (471)
T ss_dssp SEEEECSHHHHHHHHHHHHHHHHHHHTCTTCHHHHHHHHHHHSBCCSC-------------CCHHHHTTCBBCHHHHTTT
T ss_pred CEEeecchHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHhCCCCCC-------------CCcCccccChhCHHHHHHH
Confidence 899999999999999999999999999 89999999999999986532 3345789999999999983
No 8
>2p4e_P Proprotein convertase subtilisin/kexin type 9; protease, LDL receptor, LDL, endocytosis, hydrol; 1.98A {Homo sapiens}
Probab=99.92 E-value=1.1e-26 Score=256.35 Aligned_cols=271 Identities=15% Similarity=0.102 Sum_probs=41.1
Q ss_pred CceEEEeccccceEEeecCHHHHHhhcCCCCeEEEEeCccccccccccCcccCcccCCC------CCCCCcc------ce
Q 039556 16 PTHLYTYNHVVDGFSAVLSQTHLDQLQKLPGHHATYIETFGHLHTTYTPKFLGLKKDAG------LWPAQSF------CR 83 (515)
Q Consensus 16 ~~i~ysY~~~~~GFaA~lt~~~~~~L~~~p~V~~Ve~D~~~~l~tt~s~~~~Gl~~~~g------~~~~~sf------cn 83 (515)
.+++|+|+++|+||+++|+++++++|+++|+|++||+|+++..+ ...|||++... .|..... +-
T Consensus 109 ~~v~~~y~~~~~Gfsv~l~~~~l~~L~~~P~V~~Vepd~~v~~~----~~pWgL~~i~~~~~~~~~w~~~~~G~GV~VaV 184 (692)
T 2p4e_P 109 TKILHVFHGLLPGFLVKMSGDLLELALKLPHVDYIEEDSSVFAQ----SIPWNLERITPPRYRADEYQPPDGGSLVEVYL 184 (692)
T ss_dssp CEEEEEECSSSCEEEEECCGGGHHHHHTSTTEEEEEEEEEEEEC------------------------------------
T ss_pred cceeeEeeccccEEEEEeCHHHHHHHHcCCCceEEEeccccccC----CCCcchhhcccccccccccccCCCCCCcEEEE
Confidence 47999999999999999999999999999999999999988653 23488876432 2332200 22
Q ss_pred eecceEEeecCCCCCCCCceee-eccccc---c-cee--eeEEEecCCeEEEeeeeec---C-CCCCCCcc-ceEEEEee
Q 039556 84 IEERIFAECSAGNLGPDAYSIF-NGALGL---Q-REL--AVRITLGNRELTVTGQSVY---P-ENLFVSKE-RKYIFCAY 151 (515)
Q Consensus 84 ~~~GI~vv~sAGN~Gp~~~tv~-n~a~t~---d-r~~--~~~~~lg~g~~~i~G~s~~---~-~~~~~~~~-GkIvlc~~ 151 (515)
++.||...|..=. +.+. .....+ | ..| ...+..|||++ +.|.-.. + .+ ..+++ -||.-+
T Consensus 185 IDTGId~~HpdL~-----gr~~~~~~~~~~d~dg~~~~~~~~D~~GHGTH-VAGiIAg~~~GVAP-~A~L~~vKVl~~-- 255 (692)
T 2p4e_P 185 LDTSIQSDHREIE-----GRVMVTDFENVPEEDGTRFHRQASKCDSHGTH-LAGVVSGRDAGVAK-GASMRSLRVLNC-- 255 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred EcCCCCCCChhhc-----CceEecccccccCCCCCcccCCCCCCCCcHHH-hhhHhhcCCCccCC-CCEEEEEEeecC--
Confidence 6777766554311 1110 000011 1 001 13456789988 6554321 1 10 00110 122222
Q ss_pred cC-CCcchhhhhHHHHHHh---cCceeEEEcC--CCcc-cc--------CCCCccCeeecCchhhHHHHHHHhcCCCceE
Q 039556 152 DY-DGNVTVYQQFKEVQRI---GAAGAVFSSD--PRQY-LS--------SSNFSMPLVTVNPKDWELVKKYIINTENASV 216 (515)
Q Consensus 152 ~~-g~~~~~~k~~~~v~~a---Ga~gvi~~n~--~g~~-~~--------~~~~~~P~~~i~~~~g~~l~~~~~s~~~~~~ 216 (515)
.. |....+.++++.+.+. ...|+-++|. .+.. .. .....+.++..+++..+....+ +.....
T Consensus 256 ~G~g~~s~ii~aI~~a~~~~~~~~~g~~VINmSlGg~~s~~l~~Ai~~A~~~GVlvVaAAGN~G~~~~~~s---PA~~~~ 332 (692)
T 2p4e_P 256 QGKGTVSGTLIGLEFIRKSQLVQPVGPLVVLLPLAGGYSRVLNAACQRLARAGVVLVTAAGNFRDDACLYS---PASAPE 332 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCCCCHHHHHHHHHHHHhhhhcccCCceEEEecCCCCCcHHHHHHHHHHHHCCCEEEEECCCCCCCCCccC---cccCCC
Confidence 10 1111111112222221 1123333443 1100 00 0011222222222221111111 111112
Q ss_pred EEEeceeeecccCCCeeee----cCCCCCCCCCCCCCCCceEeCCCcEEeeeCCCCCCCCCCCCCccccceEEecCcccc
Q 039556 217 SIKFQITKLGTKRAPQVAY----FSSRGPDSQPPWILKPDILAPGVDILAAWVPNRPVKPIRKSDYLFSDYALMSGTSIS 292 (515)
Q Consensus 217 ~i~~~~t~~~~~~~~~va~----fSs~Gp~~~~~~~lKPdi~APG~~I~sa~~~~~~~~~~~~~~~~~~~~~~~SGTSmA 292 (515)
.| ++...+..+.++. ||||||. |||+|||++|+++++... ..|..+||||||
T Consensus 333 vI----tVGA~d~~~~~a~~ss~fSn~G~~--------vDI~APG~~I~St~~~~~------------~~y~~~SGTSmA 388 (692)
T 2p4e_P 333 VI----TVGATNAQDQPVTLGTLGTNFGRC--------VDLFAPGEDIIGASSDCS------------TCFVSQSGTSQA 388 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred EE----EEEEEcCCCCccccccccCCCCCc--------eeEEecCCcEEeeccCCC------------CceEeccchHHH
Confidence 22 3333445556666 8999984 599999999999998632 579999999999
Q ss_pred hhHHHHHHHHHHhhCCCCCHHHHHHHHHhccccc
Q 039556 293 CPHVAGIAALLKAMQRDWSSAAIRSAMMTTAYLL 326 (515)
Q Consensus 293 aPhVAG~aALl~~~~p~~s~~~i~~~L~~tA~~~ 326 (515)
||||||++|||++++|+|+|++||++|++||.+.
T Consensus 389 APhVAG~aALlls~~P~ltp~qVk~~L~~tA~~~ 422 (692)
T 2p4e_P 389 AAHVAGIAAMMLSAEPELTLAELRQRLIHFSAKD 422 (692)
T ss_dssp ----------------------------------
T ss_pred HHHHHHHHHHHHHHCCCCCHHHHHHHHHHhcccc
Confidence 9999999999999999999999999999999754
No 9
>3lxu_X Tripeptidyl-peptidase 2; spindle complex, aminopeptidase, hydrolase, phosphoprotein, protease; 3.14A {Drosophila melanogaster}
Probab=99.90 E-value=1.7e-23 Score=242.39 Aligned_cols=222 Identities=18% Similarity=0.118 Sum_probs=146.6
Q ss_pred CeeeecCCCCCCCCCCCCCCCceEeCCCcEEeeeCCCCCCCCCCCCCccccceEEecCcccchhHHHHHHHHHHh----h
Q 039556 231 PQVAYFSSRGPDSQPPWILKPDILAPGVDILAAWVPNRPVKPIRKSDYLFSDYALMSGTSISCPHVAGIAALLKA----M 306 (515)
Q Consensus 231 ~~va~fSs~Gp~~~~~~~lKPdi~APG~~I~sa~~~~~~~~~~~~~~~~~~~~~~~SGTSmAaPhVAG~aALl~~----~ 306 (515)
+.++.||||||+.. +.+||||+|||++|+++..... +.|..++|||||||||||++||+++ .
T Consensus 417 g~~asFSS~GPt~d--g~~KpDIaAPG~~I~St~~~~~------------~~y~~~SGTSmAAP~VAGvAALLLSalkq~ 482 (1354)
T 3lxu_X 417 GNVYTWTSRDPCID--GGQGVTVCAPGGAIASVPQFTM------------SKSQLMNGTSMAAPHVAGAVALLISGLKQQ 482 (1354)
T ss_dssp -CCCCCCCCSCCSS--SSCCEEEEEEC---------------------------CCCCGGGCHHHHHHHHHHHHHHHHHT
T ss_pred CccccccCCCCCcc--CCCcceEEecCceEEEeecCCC------------CceecCCCCCHHHHHHHHHHHHHHHhhHhh
Confidence 68899999999874 7899999999999999865432 6799999999999999999999987 7
Q ss_pred CCCCCHHHHHHHHHhccccccCCCCcccccCCCCCCCCCCCCCCccCccccCCCCccccCCchhHHHhhhhcCCC-ccee
Q 039556 307 QRDWSSAAIRSAMMTTAYLLDNANSTITDIRIGVSGTPLDFGSGHVNPNKAMDPGLVYDIEVQDYINYLCALNYT-SLQI 385 (515)
Q Consensus 307 ~p~~s~~~i~~~L~~tA~~~~~~~~~~~~~~~~~~~~~~~~GaG~vn~~~A~~pglvyd~~~~dy~~flc~~~~~-~~~i 385 (515)
+|.|++++||.+|++||.+... .+++.||+|+||+.+|++..+.|+..+++|+.|+|..++. ...|
T Consensus 483 ~P~LTp~qVk~lL~~TA~~~~~-------------~~~~~~G~GlLDa~~AV~~a~~~~~~p~~~v~f~~~v~~~~~rgI 549 (1354)
T 3lxu_X 483 NIEYSPYSIKRAISVTATKLGY-------------VDPFAQGHGLLNVEKAFEHLTEHRQSKDNMLRFSVRVGNNADKGI 549 (1354)
T ss_dssp TCCCCHHHHHHHHHTTSBCCTT-------------SCTTTSSSSBCCHHHHHHHHHTTTTCGGGGEEEEEEETTTTBSSE
T ss_pred CCCCCHHHHHHHHHHhCccCCC-------------CCcccccCCEeCHHHHHHHHHhcCCCCccceEEEEEecCCCCCce
Confidence 9999999999999999987642 2456899999999999999999999999999999998853 2222
Q ss_pred EEeecccccccCCCCCCCCCCcEEEEecCCCCceEEEEEEEEecc---C-CCeeeE--EEEECCCCcEEEEecceEEEec
Q 039556 386 RVLTGTSNFTCENANLDLNYPSFMIILNNTKSASFTFKWVLTNVD---D-TSSVNT--AAVKAPAGMKVVVQPETATFDR 459 (515)
Q Consensus 386 ~~~~~~~~~~c~~~~~~lN~PSi~~~~~~~~~~~~t~~rtvtNvg---~-~~~tY~--~~v~~p~g~~v~v~P~~l~~~~ 459 (515)
- .+ .+ .. +.. ....++++-+..|.. + ....|. +.+.... --|. -|+.|.+
T Consensus 550 y--lR--------~~-~~--~~~-------~~~tv~V~p~f~~~~~~~~~~~i~f~~~l~L~~t~-~wv~-~p~~l~l-- 605 (1354)
T 3lxu_X 550 H--LR--------QG-VQ--RNS-------IDYNVYIEPIFYNDKEADPKDKFNFNVRLNLIASQ-PWVQ-CGAFLDL-- 605 (1354)
T ss_dssp E--EC--------SS-CC--CSC-------EEEEEEEEEEESSCSCSSSTTCSCCCCEEEEEESS-TTEE-ECSCEEC--
T ss_pred E--Ee--------cc-cc--CCc-------eEEEEEEeeeecCcccCChhhccceEEEEEEecCC-Ccee-cccceee--
Confidence 1 11 00 00 100 001222233332211 1 111222 2222211 1233 3777777
Q ss_pred CCcEEEEEEEEEecccccccCCCCCcceEEEEEEEeeC---CeeEEEeEEEEEE
Q 039556 460 KYSKAEFNLTLSIDLGITVSPKCNYLGNFGYLTWHENI---GKHMVRSPIVSAF 510 (515)
Q Consensus 460 ~g~~~~~~Vt~~~~~~~~~~~~~~~~~~~G~i~~~~~~---~~~~vr~P~~v~~ 510 (515)
.++.++|.|.+++... .. +.++++|..-..+ .+...|+||.|..
T Consensus 606 ~~~~r~~~v~vDp~~L----~~---G~h~~~v~~~D~~~~~~gp~f~ipvTv~~ 652 (1354)
T 3lxu_X 606 SYGTRSIAVRVDPTGL----QP---GVHSAVIRAYDTDCVQKGSLFEIPVTVVQ 652 (1354)
T ss_dssp TTSCEEEEEEECGGGC----CS---EEEEEEEEEEESSCTTSCCSEEEEEEEEE
T ss_pred cCCCceEEEEECCCCC----CC---cceeEEEEEEEcCCcccCceEEeeEEEEe
Confidence 6888999999998753 22 6789999863332 3689999998753
No 10
>1r6v_A Subtilisin-like serine protease; sandwich domain, propeptide, hydrolase; 1.70A {Fervidobacterium pennivorans} SCOP: c.41.1.1
Probab=99.90 E-value=1.2e-24 Score=240.99 Aligned_cols=119 Identities=29% Similarity=0.359 Sum_probs=94.8
Q ss_pred eeeecCCCCCCCCCCCCCCCceEeCCCcEEeeeCCCCCCC-----CCCCCCccccceEEecCcccchhHHHHHHHHHHhh
Q 039556 232 QVAYFSSRGPDSQPPWILKPDILAPGVDILAAWVPNRPVK-----PIRKSDYLFSDYALMSGTSISCPHVAGIAALLKAM 306 (515)
Q Consensus 232 ~va~fSs~Gp~~~~~~~lKPdi~APG~~I~sa~~~~~~~~-----~~~~~~~~~~~~~~~SGTSmAaPhVAG~aALl~~~ 306 (515)
.++.|||+||.+ ||+|||++|+++++...... ........ +.|..++|||||||||||++|||+|+
T Consensus 327 ~~a~fSn~G~~v--------dv~APG~~I~St~p~~~~~g~~~~~~~~~~~~~-~~y~~~sGTSmAAP~VAGvaALl~s~ 397 (671)
T 1r6v_A 327 RVAGFSSRSDGV--------SVGAPGVTILSTVPGEDSIGYEGHNENVPATNG-GTYDYYQGTSMAAPHVTGVVAVLLQK 397 (671)
T ss_dssp EECSSSCCCTTE--------EEEEECSSEEEECCCTTSTTCCCCCTTCCCSSS-CCEEEEESHHHHHHHHHHHHHHHHHH
T ss_pred eeccccCCCCCe--------eEEecCCCEEeecCCCCccccccccccccccCC-CceEEecCccHHHHHHHHHHHHHHHH
Confidence 499999999976 99999999999998632100 00000111 57999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHhccccccCCCCcccccCCCCCCCCCCCCCCccCccccCCCCccccCCchhH
Q 039556 307 QRDWSSAAIRSAMMTTAYLLDNANSTITDIRIGVSGTPLDFGSGHVNPNKAMDPGLVYDIEVQDY 371 (515)
Q Consensus 307 ~p~~s~~~i~~~L~~tA~~~~~~~~~~~~~~~~~~~~~~~~GaG~vn~~~A~~pglvyd~~~~dy 371 (515)
+|.|+|++||++|++||.++... .....+|+|+||+.+|++..|.++....||
T Consensus 398 ~P~lt~~~Vr~~L~~TA~~~~~~------------g~d~~~G~G~vna~~Al~~~l~~~~~~~~~ 450 (671)
T 1r6v_A 398 FPNAKPWQIRKLLENTAFDFNGN------------GWDHDTGYGLVKLDAALQGPLPTQGGVEEF 450 (671)
T ss_dssp CTTCCHHHHHHHHHHHCBCSSSS------------SCBTTTBTCBCCHHHHHHCCCCSSSEEEEE
T ss_pred CCCCCHHHHHHHHHHhCcCCCCC------------CCCCCcccceeCHHHHhhhhcCCCCCccce
Confidence 99999999999999999876421 234589999999999999888776655444
No 11
>1gci_A Subtilisin; hydrolase, serine protease; 0.78A {Bacillus lentus} SCOP: c.41.1.1 PDB: 1jea_A 1ndq_A 1svn_A 1tk2_A* 3bx1_A 1ah2_A 1iav_A* 1c9m_A* 1wsd_A 1mpt_A 1ndu_A 1c9j_A 1q5p_A* 1st3_A 1c9n_A*
Probab=99.84 E-value=2.4e-21 Score=193.29 Aligned_cols=98 Identities=40% Similarity=0.577 Sum_probs=87.8
Q ss_pred ecccCCCeeeecCCCCCCCCCCCCCCCceEeCCCcEEeeeCCCCCCCCCCCCCccccceEEecCcccchhHHHHHHHHHH
Q 039556 225 LGTKRAPQVAYFSSRGPDSQPPWILKPDILAPGVDILAAWVPNRPVKPIRKSDYLFSDYALMSGTSISCPHVAGIAALLK 304 (515)
Q Consensus 225 ~~~~~~~~va~fSs~Gp~~~~~~~lKPdi~APG~~I~sa~~~~~~~~~~~~~~~~~~~~~~~SGTSmAaPhVAG~aALl~ 304 (515)
...+..+.++.||++||.+ ||+|||++|+++++. +.|..++|||||||||||++|||+
T Consensus 172 ga~~~~~~~~~~S~~G~~~--------di~APG~~i~s~~~~--------------~~~~~~sGTS~AaP~vaG~aAll~ 229 (269)
T 1gci_A 172 GATDQNNNRASFSQYGAGL--------DIVAPGVNVQSTYPG--------------STYASLNGTSMATPHVAGAAALVK 229 (269)
T ss_dssp EEECTTSCBCTTCCCSTTE--------EEEEECSSEEEEETT--------------TEEEEECSHHHHHHHHHHHHHHHH
T ss_pred EeecCCCCCCCCCCCCCCc--------ceEecCCCeEeecCC--------------CCEEEcCcHHHHHHHHHHHHHHHH
Confidence 3445678899999999965 999999999999986 689999999999999999999999
Q ss_pred hhCCCCCHHHHHHHHHhccccccCCCCcccccCCCCCCCCCCCCCCccCccccCC
Q 039556 305 AMQRDWSSAAIRSAMMTTAYLLDNANSTITDIRIGVSGTPLDFGSGHVNPNKAMD 359 (515)
Q Consensus 305 ~~~p~~s~~~i~~~L~~tA~~~~~~~~~~~~~~~~~~~~~~~~GaG~vn~~~A~~ 359 (515)
|++|.|++.|||++|++||+++. .+..||+|+||+.+|++
T Consensus 230 ~~~p~~t~~~v~~~L~~tA~~~g---------------~~~~~G~G~vn~~~A~~ 269 (269)
T 1gci_A 230 QKNPSWSNVQIRNHLKNTATSLG---------------STNLYGSGLVNAEAATR 269 (269)
T ss_dssp HHCTTCCHHHHHHHHHHTSBCCS---------------CHHHHTTCBCCHHHHTC
T ss_pred HhCCCCCHHHHHHHHHHhCccCC---------------CCCCcccCccCHHHHcC
Confidence 99999999999999999998763 23478999999999985
No 12
>1r0r_E Subtilisin carlsberg; high resolution, serine protease, protein inhibitor, hydrolase; 1.10A {Bacillus licheniformis} SCOP: c.41.1.1 PDB: 1af4_A* 1be8_A* 1bfk_A 1bfu_A 1be6_A 1oyv_A 1cse_E 1sbc_A 1sca_A 1scb_A 1scd_A 2sec_E 2wuv_A 2wuw_E 1yu6_A 1scn_E* 1c3l_A 1avt_A* 1av7_A* 1sel_A ...
Probab=99.83 E-value=4.6e-21 Score=191.69 Aligned_cols=98 Identities=31% Similarity=0.537 Sum_probs=87.7
Q ss_pred ecccCCCeeeecCCCCCCCCCCCCCCCceEeCCCcEEeeeCCCCCCCCCCCCCccccceEEecCcccchhHHHHHHHHHH
Q 039556 225 LGTKRAPQVAYFSSRGPDSQPPWILKPDILAPGVDILAAWVPNRPVKPIRKSDYLFSDYALMSGTSISCPHVAGIAALLK 304 (515)
Q Consensus 225 ~~~~~~~~va~fSs~Gp~~~~~~~lKPdi~APG~~I~sa~~~~~~~~~~~~~~~~~~~~~~~SGTSmAaPhVAG~aALl~ 304 (515)
...+..+.++.||++||. |||+|||++|+++++. +.|..++|||||||||||++|||+
T Consensus 177 ga~~~~~~~~~~S~~G~~--------~di~APG~~i~s~~~~--------------~~~~~~sGTS~AaP~vaG~aAll~ 234 (274)
T 1r0r_E 177 GAVDSNSNRASFSSVGAE--------LEVMAPGAGVYSTYPT--------------NTYATLNGTSMASPHVAGAAALIL 234 (274)
T ss_dssp EEECTTSCBCTTCCCSTT--------EEEEEECSSEEEEETT--------------TEEEEECSHHHHHHHHHHHHHHHH
T ss_pred EEecCCCCcCccCCCCCC--------ceEEeCCCCeEeecCC--------------CCEEEeccHHHHHHHHHHHHHHHH
Confidence 344567889999999985 4999999999999986 689999999999999999999999
Q ss_pred hhCCCCCHHHHHHHHHhccccccCCCCcccccCCCCCCCCCCCCCCccCccccCC
Q 039556 305 AMQRDWSSAAIRSAMMTTAYLLDNANSTITDIRIGVSGTPLDFGSGHVNPNKAMD 359 (515)
Q Consensus 305 ~~~p~~s~~~i~~~L~~tA~~~~~~~~~~~~~~~~~~~~~~~~GaG~vn~~~A~~ 359 (515)
|++|.+++++||++|++||+++. ....+|+|+||+.+|++
T Consensus 235 ~~~p~lt~~~v~~~L~~tA~~~g---------------~~~~~G~G~~~~~~A~~ 274 (274)
T 1r0r_E 235 SKHPNLSASQVRNRLSSTATYLG---------------SSFYYGKGLINVEAAAQ 274 (274)
T ss_dssp HHSTTCCHHHHHHHHHHTCBCCS---------------CHHHHTTCBCCHHHHTC
T ss_pred HHCCCCCHHHHHHHHHHhCcccC---------------CCCCcccCccCHHHHhC
Confidence 99999999999999999998763 23479999999999985
No 13
>4h6x_A Thiazoline oxidase/subtilisin-like protease; hydrolase; 2.00A {Prochloron didemni} PDB: 4aks_A 4akt_A
Probab=99.83 E-value=7.6e-21 Score=197.11 Aligned_cols=109 Identities=32% Similarity=0.394 Sum_probs=80.9
Q ss_pred eeecccCCCeeeecCCCCCCCCCCCCCCCceEeCCCcEEeeeCCCCCCCCCCCCCccccceEEecCcccchhHHHHHHHH
Q 039556 223 TKLGTKRAPQVAYFSSRGPDSQPPWILKPDILAPGVDILAAWVPNRPVKPIRKSDYLFSDYALMSGTSISCPHVAGIAAL 302 (515)
Q Consensus 223 t~~~~~~~~~va~fSs~Gp~~~~~~~lKPdi~APG~~I~sa~~~~~~~~~~~~~~~~~~~~~~~SGTSmAaPhVAG~aAL 302 (515)
++...+..+.++.|||||+.. .||||+|||++|+++++.. +.|..+||||||||||||++||
T Consensus 225 ~Vga~~~~~~~~~fSn~G~~~-----~~~di~APG~~i~s~~~~~-------------~~~~~~sGTS~AaP~vaG~~Al 286 (357)
T 4h6x_A 225 AVGAAKVDGTPCHFSNWGGNN-----TKEGILAPGEEILGAQPCT-------------EEPVRLTGTSMAAPVMTGISAL 286 (357)
T ss_dssp EEEEECTTSSBCTTCC---CT-----TTTEEEEECSSEEECCTTC-------------SCCEEECSHHHHHHHHHHHHHH
T ss_pred eEEEeccCCcccccccCCCCC-----CccceeecCCCeEeccCCC-------------CcccccCcHHHHHHHHHHHHHH
Confidence 344557788999999999864 4899999999999998863 4567899999999999999999
Q ss_pred HHhh----CCCCCHHHHHHHHHhccccccCCCCcccccCCCCCCCCCCCCCCccCccccCC
Q 039556 303 LKAM----QRDWSSAAIRSAMMTTAYLLDNANSTITDIRIGVSGTPLDFGSGHVNPNKAMD 359 (515)
Q Consensus 303 l~~~----~p~~s~~~i~~~L~~tA~~~~~~~~~~~~~~~~~~~~~~~~GaG~vn~~~A~~ 359 (515)
|++. +|.|+++|||.+|++||++++. .....+..+|+|+||+.+|++
T Consensus 287 l~s~~~~~~~~lt~~~v~~~L~~tA~~~~~----------~~~~~~~~~G~G~vn~~~A~~ 337 (357)
T 4h6x_A 287 LMSLQVQQGKPVDAEAVRTALLKTAIPCDP----------EVVEEPERCLRGFVNIPGAMK 337 (357)
T ss_dssp HHHHHHHTTCCCCHHHHHHHHHHC------------------------CTTCBCCHHHHHH
T ss_pred HHHhhHhhCCCCCHHHHHHHHHhhCccCCC----------CCCCCcccceeEEecHHHHHH
Confidence 9965 5679999999999999997742 123345689999999999987
No 14
>2iy9_A SUBA; toxin, shiga, plasmid; 1.8A {Escherichia coli}
Probab=99.83 E-value=7.8e-21 Score=196.07 Aligned_cols=96 Identities=20% Similarity=0.172 Sum_probs=86.4
Q ss_pred CCeee-------ecCCCCCCCCCCCCCCCceEeCCCcEEeeeCCCCCCCCCCCCCccccceEEecCcccchhHHHHHHHH
Q 039556 230 APQVA-------YFSSRGPDSQPPWILKPDILAPGVDILAAWVPNRPVKPIRKSDYLFSDYALMSGTSISCPHVAGIAAL 302 (515)
Q Consensus 230 ~~~va-------~fSs~Gp~~~~~~~lKPdi~APG~~I~sa~~~~~~~~~~~~~~~~~~~~~~~SGTSmAaPhVAG~aAL 302 (515)
.+.++ .||++||. ||||+|||++|+++++. +.|..++|||||||||||++||
T Consensus 226 ~g~~~~~~~~~~~fS~~G~~-------~~di~APG~~i~s~~~~--------------~~~~~~sGTS~AaP~VaG~aAl 284 (347)
T 2iy9_A 226 KGETPVLHGGGITGSRFGNN-------WVDIAAPGQNITFLRPD--------------AKTGTGSGTSEATAIVSGVLAA 284 (347)
T ss_dssp TTSCCCBCCCSSSCBCBCTT-------TCSEEEECSSEEEECTT--------------SCEEEECSHHHHHHHHHHHHHH
T ss_pred CCceecccCCCCCCCCCCCC-------CCEEEeCCCCeEeecCC--------------CCeEeccchHHHHHHHHHHHHH
Confidence 56666 99999995 66999999999999986 7899999999999999999999
Q ss_pred HHhhCCCCCHHHHHHHHHhccccccCCCCcccccCCCCCCCCCCCCCCccCccccCC
Q 039556 303 LKAMQRDWSSAAIRSAMMTTAYLLDNANSTITDIRIGVSGTPLDFGSGHVNPNKAMD 359 (515)
Q Consensus 303 l~~~~p~~s~~~i~~~L~~tA~~~~~~~~~~~~~~~~~~~~~~~~GaG~vn~~~A~~ 359 (515)
|+|++|+|++.+||++|++||++.... ....+|+|+||+.+|++
T Consensus 285 l~~~~p~lt~~~v~~~L~~tA~~~~~~-------------~~~~~G~G~ld~~~A~~ 328 (347)
T 2iy9_A 285 MTSCNPRATATELKRTLLESADKYPSL-------------VDKVTEGRVLNAEKAIS 328 (347)
T ss_dssp HHHHCTTSCHHHHHHHHHHHSEECGGG-------------TTTSGGGEECCHHHHHH
T ss_pred HHHhCCCCCHHHHHHHHHHhCccCCCC-------------CCccccCCEecHHHHHH
Confidence 999999999999999999999876431 12589999999999998
No 15
>1to2_E Subtilisin BPN'; serine protease, hydrolase; HET: CIT 15P; 1.30A {Bacillus amyloliquefaciens} SCOP: c.41.1.1 PDB: 1tm1_E* 1tm3_E* 1tm4_E* 1lw6_E* 1tm7_E* 1tmg_E* 1to1_E* 1tm5_E* 1y1k_E* 1y33_E* 1y34_E* 1y3b_E* 1y3c_E* 1y3d_E* 1y3f_E* 1y48_E* 1y4a_E* 1y4d_E 1sup_A* 1sib_E ...
Probab=99.83 E-value=6.8e-21 Score=191.16 Aligned_cols=99 Identities=34% Similarity=0.572 Sum_probs=88.7
Q ss_pred ecccCCCeeeecCCCCCCCCCCCCCCCceEeCCCcEEeeeCCCCCCCCCCCCCccccceEEecCcccchhHHHHHHHHHH
Q 039556 225 LGTKRAPQVAYFSSRGPDSQPPWILKPDILAPGVDILAAWVPNRPVKPIRKSDYLFSDYALMSGTSISCPHVAGIAALLK 304 (515)
Q Consensus 225 ~~~~~~~~va~fSs~Gp~~~~~~~lKPdi~APG~~I~sa~~~~~~~~~~~~~~~~~~~~~~~SGTSmAaPhVAG~aALl~ 304 (515)
...+..+.++.||++||.. ||+|||++|+++++. +.|..++|||||||||||++|||+
T Consensus 178 ga~~~~~~~~~fS~~G~~~--------di~APG~~i~s~~~~--------------~~~~~~sGTS~AaP~vaG~aAll~ 235 (281)
T 1to2_E 178 GAVDSSNQRASFSSVGPEL--------DVMAPGVSIQSTLPG--------------NKYGAYNGTSMASPHVAGAAALIL 235 (281)
T ss_dssp EEECTTSCBCTTCCCSTTC--------CEEEECSSEEEEETT--------------TEEEEECBHHHHHHHHHHHHHHHH
T ss_pred EEecCCCCcCCcCCCCCCc--------eEEecCCCeEeecCC--------------CCEEecCcHHHHHHHHHHHHHHHH
Confidence 3445678899999999964 999999999999986 689999999999999999999999
Q ss_pred hhCCCCCHHHHHHHHHhccccccCCCCcccccCCCCCCCCCCCCCCccCccccCCC
Q 039556 305 AMQRDWSSAAIRSAMMTTAYLLDNANSTITDIRIGVSGTPLDFGSGHVNPNKAMDP 360 (515)
Q Consensus 305 ~~~p~~s~~~i~~~L~~tA~~~~~~~~~~~~~~~~~~~~~~~~GaG~vn~~~A~~p 360 (515)
|++|.|++++||++|++||+++. +++.||+|+||+.+|+.+
T Consensus 236 ~~~p~lt~~~v~~~L~~tA~~~g---------------~~~~~G~G~v~~~~a~~~ 276 (281)
T 1to2_E 236 SKHPNWTNTQVRSSLENTTTKLG---------------DSFYYGKGLINVQAAAQH 276 (281)
T ss_dssp HHSTTCCHHHHHHHHHTTCBCCS---------------CHHHHTTCBCCHHHHTSS
T ss_pred HhCCCCCHHHHHHHHHhhCcccC---------------CCCCcccceecHHHHhhh
Confidence 99999999999999999998763 235799999999999874
No 16
>2ixt_A 36KDA protease; serine protease, sphericase, subtilisin like protease, hydrolase; 0.8A {Bacillus sphaericus} SCOP: c.41.1.1 PDB: 3d43_A 1ea7_A* 2gko_A*
Probab=99.81 E-value=1.4e-19 Score=183.79 Aligned_cols=104 Identities=31% Similarity=0.390 Sum_probs=87.3
Q ss_pred eeeecCCCCCCCCCC----CCCCCceEeCCCcEEeeeCCCCCCCCCCCCCccccceEEecCcccchhHHHHHHHHHHhhC
Q 039556 232 QVAYFSSRGPDSQPP----WILKPDILAPGVDILAAWVPNRPVKPIRKSDYLFSDYALMSGTSISCPHVAGIAALLKAMQ 307 (515)
Q Consensus 232 ~va~fSs~Gp~~~~~----~~lKPdi~APG~~I~sa~~~~~~~~~~~~~~~~~~~~~~~SGTSmAaPhVAG~aALl~~~~ 307 (515)
.++.||++||..... ...||||+|||++|+++++. +.|..++|||||||||||++|||++++
T Consensus 202 ~~~~~S~~G~~~~~g~~~~~~~~~di~ApG~~i~s~~~~--------------~~~~~~sGTS~AaP~vaG~aAll~~~~ 267 (310)
T 2ixt_A 202 RVADYSSRGYISTAGDYVIQEGDIEISAPGSSVYSTWYN--------------GGYNTISGTSMATPHVSGLAAKIWAEN 267 (310)
T ss_dssp EECTTSCCCCTTTTTSSSCCTTCCCEEEECSSEEEECTT--------------SSEEEECSHHHHHHHHHHHHHHHHHHS
T ss_pred eeccccCCCCccCCccccccCCCeeEECCCCCEeeecCC--------------CCEEeeccHHHHHHHHHHHHHHHHHhC
Confidence 899999999953211 23499999999999999886 689999999999999999999999999
Q ss_pred CCCCHHHHHHHHHhccccccCCCCcccccCCCCCCCCCCCCCCccCc
Q 039556 308 RDWSSAAIRSAMMTTAYLLDNANSTITDIRIGVSGTPLDFGSGHVNP 354 (515)
Q Consensus 308 p~~s~~~i~~~L~~tA~~~~~~~~~~~~~~~~~~~~~~~~GaG~vn~ 354 (515)
|.|++++||++|++||++.+..+. ....+..++.+|+|++|.
T Consensus 268 p~lt~~~v~~~L~~tA~~~~~~~~-----~~a~~g~d~~~G~G~~~v 309 (310)
T 2ixt_A 268 PSLSNTQLRSNLQERAKSVDIKGG-----YGAAIGDDYASGFGFARV 309 (310)
T ss_dssp TTCCHHHHHHHHHHHHHTSCCCBS-----TTCCSSSBTTTBTCBCCC
T ss_pred CCCCHHHHHHHHHhhCcccCCCCC-----cccccCCccccccceeec
Confidence 999999999999999998764321 112455678999999986
No 17
>1dbi_A AK.1 serine protease; hydrolase; 1.80A {Bacillus SP} SCOP: c.41.1.1
Probab=99.81 E-value=6.1e-20 Score=184.11 Aligned_cols=98 Identities=38% Similarity=0.526 Sum_probs=86.0
Q ss_pred eecccCCCeeeecCCCCCCCCCCCCCCCceEeCCCcEEeeeCCCCCCCCCCCCCccccceEEecCcccchhHHHHHHHHH
Q 039556 224 KLGTKRAPQVAYFSSRGPDSQPPWILKPDILAPGVDILAAWVPNRPVKPIRKSDYLFSDYALMSGTSISCPHVAGIAALL 303 (515)
Q Consensus 224 ~~~~~~~~~va~fSs~Gp~~~~~~~lKPdi~APG~~I~sa~~~~~~~~~~~~~~~~~~~~~~~SGTSmAaPhVAG~aALl 303 (515)
+...+..+.++.||++||.. ||+|||++|+++++. +.|..++|||||||||||++|||
T Consensus 182 Vga~~~~~~~~~~S~~G~~~--------dv~ApG~~i~s~~~~--------------~~~~~~sGTS~AaP~vaG~aAll 239 (280)
T 1dbi_A 182 VGAVDQYDRLASFSNYGTWV--------DVVAPGVDIVSTITG--------------NRYAYMSGTSMASPHVAGLAALL 239 (280)
T ss_dssp EEEECTTSCBCTTBCCSTTC--------CEEEECSSEEEEETT--------------TEEEEECSHHHHHHHHHHHHHHH
T ss_pred EEeeCCCCCcCCCCCCCCCc--------eEEEecCCeEeecCC--------------CCEEEccCHHHHHHHHHHHHHHH
Confidence 34456778999999999865 999999999999986 68999999999999999999999
Q ss_pred HhhCCCCCHHHHHHHHHhccccccCCCCcccccCCCCCCCCCCCCCCccCccccCC
Q 039556 304 KAMQRDWSSAAIRSAMMTTAYLLDNANSTITDIRIGVSGTPLDFGSGHVNPNKAMD 359 (515)
Q Consensus 304 ~~~~p~~s~~~i~~~L~~tA~~~~~~~~~~~~~~~~~~~~~~~~GaG~vn~~~A~~ 359 (515)
++ |.+++.+||++|++||+++.. ....+|+|+||+.+|++
T Consensus 240 ~~--p~~t~~~v~~~L~~ta~~~~~--------------~~~~~G~G~vn~~~A~~ 279 (280)
T 1dbi_A 240 AS--QGRNNIEIRQAIEQTADKISG--------------TGTYFKYGRINSYNAVT 279 (280)
T ss_dssp HH--TTCCHHHHHHHHHHTSBCCTT--------------BTTTBSSEECCHHHHHT
T ss_pred HC--CCCCHHHHHHHHHHhCccCCC--------------CCCcccCCEECHHHHhc
Confidence 87 899999999999999987642 12468999999999986
No 18
>2x8j_A Intracellular subtilisin protease; hydrolase, serine protease, intracellular proteinase regulat; HET: CSX 1PE; 1.56A {Bacillus clausii} PDB: 2wv7_A 2wwt_A 2xrm_A*
Probab=99.80 E-value=4.5e-20 Score=189.06 Aligned_cols=100 Identities=28% Similarity=0.417 Sum_probs=86.0
Q ss_pred eecccCCCeeeecCCCCCCCCCCCCCCCceEeCCCcEEeeeCCCCCCCCCCCCCccccceEEecCcccchhHHHHHHHHH
Q 039556 224 KLGTKRAPQVAYFSSRGPDSQPPWILKPDILAPGVDILAAWVPNRPVKPIRKSDYLFSDYALMSGTSISCPHVAGIAALL 303 (515)
Q Consensus 224 ~~~~~~~~~va~fSs~Gp~~~~~~~lKPdi~APG~~I~sa~~~~~~~~~~~~~~~~~~~~~~~SGTSmAaPhVAG~aALl 303 (515)
+.+.+..+.++.||++||. |||+|||++|+++++. +.|..++|||||||||||++|||
T Consensus 206 Vga~~~~~~~~~fS~~G~~--------~di~APG~~i~s~~~~--------------~~~~~~sGTS~AaP~VaG~aAll 263 (327)
T 2x8j_A 206 VGAVDFDLRLSDFTNTNEE--------IDIVAPGVGIKSTYLD--------------SGYAELSGTAMAAPHVAGALALI 263 (327)
T ss_dssp EEEECTTCCBSCC---CCC--------CSEEEECSSEEEECST--------------TCEEEEESGGGTHHHHHHHHHHH
T ss_pred EEEECCCCCCCCccCCCCC--------ceEecCcCceEeecCC--------------CCEEeecCHHHHHHHHHHHHHHH
Confidence 3445667899999999985 4999999999999886 68999999999999999999999
Q ss_pred Hhh-----CCCCCHHHHHHHHHhccccccCCCCcccccCCCCCCCCCCCCCCccCccccCC
Q 039556 304 KAM-----QRDWSSAAIRSAMMTTAYLLDNANSTITDIRIGVSGTPLDFGSGHVNPNKAMD 359 (515)
Q Consensus 304 ~~~-----~p~~s~~~i~~~L~~tA~~~~~~~~~~~~~~~~~~~~~~~~GaG~vn~~~A~~ 359 (515)
+++ +|.+++.+||++|++||++... +...+|+|+||+.+|++
T Consensus 264 ~~~~~~~~~p~ls~~~v~~~L~~tA~~~g~--------------~~~~~G~G~vd~~~A~~ 310 (327)
T 2x8j_A 264 INLAEDAFKRSLSETEIYAQLVRRATPIGF--------------TAQAEGNGFLTLDLVER 310 (327)
T ss_dssp HHHHHHHHTSCCCHHHHHHHHHTTEECCSS--------------CHHHHTTCEECTTHHHH
T ss_pred HHhhhhhcCCCCCHHHHHHHHHHhCccCCC--------------CCCceeeeEECHHHHHH
Confidence 999 9999999999999999987631 24579999999999987
No 19
>1wmd_A Protease; alpha-beta hydrolase fold, jelly-roll beta-barrel, hydrolase; 1.30A {Bacillus SP} SCOP: b.18.1.20 c.41.1.1 PDB: 1wme_A 1wmf_A
Probab=99.79 E-value=4.5e-20 Score=196.00 Aligned_cols=116 Identities=32% Similarity=0.415 Sum_probs=93.5
Q ss_pred CCeeeecCCCCCCCCCCCCCCCceEeCCCcEEeeeCCCCCCCCCCCCCccccceEEecCcccchhHHHHHHHHHHhhCCC
Q 039556 230 APQVAYFSSRGPDSQPPWILKPDILAPGVDILAAWVPNRPVKPIRKSDYLFSDYALMSGTSISCPHVAGIAALLKAMQRD 309 (515)
Q Consensus 230 ~~~va~fSs~Gp~~~~~~~lKPdi~APG~~I~sa~~~~~~~~~~~~~~~~~~~~~~~SGTSmAaPhVAG~aALl~~~~p~ 309 (515)
.+.++.||||||..+ +.+||||+|||++|+++++........ ..... +.|..++|||||||||||++|||+|++|+
T Consensus 199 ~~~~a~fS~~G~~~~--g~~kpdi~ApG~~i~s~~~~~~~~~~~-~~~~~-~~~~~~sGTS~AaP~vaG~aAll~~~~~~ 274 (434)
T 1wmd_A 199 INHVAQFSSRGPTKD--GRIKPDVMAPGTFILSARSSLAPDSSF-WANHD-SKYAYMGGTSMATPIVAGNVAQLREHFVK 274 (434)
T ss_dssp TTSBCTTSCCCCCTT--SCCCCCEEEECSSEEEECCTTCCGGGS-SEEEE-TTEEEECSHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCccccccCCCCCCC--CCCCceEEcCCCCeEecCCCCCCCccc-ccCCC-CceEeecchhHHHHHHHHHHHHHHHHHHh
Confidence 678999999999874 899999999999999998753210000 00001 68999999999999999999999999987
Q ss_pred C-----CHHHHHHHHHhccccccCCCCcccccCCCCCCCCCCCCCCccCccccCCCC
Q 039556 310 W-----SSAAIRSAMMTTAYLLDNANSTITDIRIGVSGTPLDFGSGHVNPNKAMDPG 361 (515)
Q Consensus 310 ~-----s~~~i~~~L~~tA~~~~~~~~~~~~~~~~~~~~~~~~GaG~vn~~~A~~pg 361 (515)
+ ++++||++|+++|+++. .......+|+|+||+.+|+...
T Consensus 275 ~~~~~~s~~~vk~~L~~tA~~~~------------~~~~~~~~G~G~vd~~~a~~~~ 319 (434)
T 1wmd_A 275 NRGITPKPSLLKAALIAGAADIG------------LGYPNGNQGWGRVTLDKSLNVA 319 (434)
T ss_dssp HSSSCCCHHHHHHHHHHHCBCCS------------SCSSCTTTTTCBCCHHHHHTCE
T ss_pred ccCCCCCHHHHHHHHHcCCcccC------------CCCCCccCCcCeEeHHHhcccc
Confidence 6 89999999999998642 1235678999999999999643
No 20
>3zxy_A Subtilisin-like protein; hydrolase; 1.58A {Prochloron didemni} PDB: 3zxx_A
Probab=99.79 E-value=6.2e-20 Score=183.99 Aligned_cols=107 Identities=27% Similarity=0.311 Sum_probs=89.2
Q ss_pred eecccCCCeeeecCCCCCCCCCCCCCCCceEeCCCcEEeeeCCCCCCCCCCCCCccccceEEecCcccchhHHHHHHHHH
Q 039556 224 KLGTKRAPQVAYFSSRGPDSQPPWILKPDILAPGVDILAAWVPNRPVKPIRKSDYLFSDYALMSGTSISCPHVAGIAALL 303 (515)
Q Consensus 224 ~~~~~~~~~va~fSs~Gp~~~~~~~lKPdi~APG~~I~sa~~~~~~~~~~~~~~~~~~~~~~~SGTSmAaPhVAG~aALl 303 (515)
+...+..+.++.||+||+.. .||||.|||++|+++++. +.|..++|||||||||||++|||
T Consensus 164 Vga~~~~~~~~~~S~~~~~~-----~~~di~ApG~~i~s~~~~--------------~~~~~~sGTS~AaP~vaG~aAll 224 (282)
T 3zxy_A 164 VGAMDDHGHPLDFSNWGSTY-----EQQGILAPGEDILGAKPG--------------GGTERLSGTAFATPIVSGVAALL 224 (282)
T ss_dssp EEEECTTSCBCSSSCCCHHH-----HHHEEEEECSSEEEECTT--------------SCEEEECSHHHHHHHHHHHHHHH
T ss_pred EEEEcCCCccccccCCCCCc-----cccceeccCcceeeecCC--------------CceeecCCCcccchHHHHHHHHH
Confidence 34456778999999999854 588999999999999987 78999999999999999999999
Q ss_pred HhhC----CCCCHHHHHHHHHhccccccCCCCcccccCCCCCCCCCCCCCCccCccccCC
Q 039556 304 KAMQ----RDWSSAAIRSAMMTTAYLLDNANSTITDIRIGVSGTPLDFGSGHVNPNKAMD 359 (515)
Q Consensus 304 ~~~~----p~~s~~~i~~~L~~tA~~~~~~~~~~~~~~~~~~~~~~~~GaG~vn~~~A~~ 359 (515)
++++ |.++|++||++|++||++++. ..+.....+|+|+||+.+|++
T Consensus 225 ~~~~~~~~~~~~~~~vk~~L~~tA~~~~~----------~~~~~~~~~G~G~ln~~~A~~ 274 (282)
T 3zxy_A 225 LSEQVRRGETPDPQKVRQLLLQSALPCDD----------DAPEQARRCLAGRLNVSGAFT 274 (282)
T ss_dssp HHHHHHTTCCCCHHHHHHHHHHHCBCC-----------------CGGGTTCBCCHHHHHH
T ss_pred HHHhHhhCCCCCHHHHHHHHHhhCeeCCC----------CCCCccCceeeeEeCHHHHHH
Confidence 9975 789999999999999987643 123334578999999999986
No 21
>1thm_A Thermitase; hydrolase(serine protease); 1.37A {Thermoactinomyces vulgaris} SCOP: c.41.1.1 PDB: 2tec_E 1tec_E 3tec_E
Probab=99.79 E-value=1.9e-19 Score=180.40 Aligned_cols=97 Identities=36% Similarity=0.524 Sum_probs=85.2
Q ss_pred ecccCCCeeeecCCCCCCCCCCCCCCCceEeCCCcEEeeeCCCCCCCCCCCCCccccceEEecCcccchhHHHHHHHHHH
Q 039556 225 LGTKRAPQVAYFSSRGPDSQPPWILKPDILAPGVDILAAWVPNRPVKPIRKSDYLFSDYALMSGTSISCPHVAGIAALLK 304 (515)
Q Consensus 225 ~~~~~~~~va~fSs~Gp~~~~~~~lKPdi~APG~~I~sa~~~~~~~~~~~~~~~~~~~~~~~SGTSmAaPhVAG~aALl~ 304 (515)
...+..+.++.||++||.+ ||+|||++|+++++. +.|..++|||||||||||++|||
T Consensus 182 ga~~~~~~~~~fS~~G~~~--------dv~APG~~i~s~~~~--------------~~~~~~sGTS~AaP~VaG~aAll- 238 (279)
T 1thm_A 182 ASTDQNDNKSSFSTYGSWV--------DVAAPGSSIYSTYPT--------------STYASLSGTSMATPHVAGVAGLL- 238 (279)
T ss_dssp EEECTTSCBCTTCCCCTTC--------CEEEECSSEEEEETT--------------TEEEEECSHHHHHHHHHHHHHHH-
T ss_pred EEeCCCCCcCCcCCCCCce--------EEEEcCCCeEEEeCC--------------CCEEEcccHHHHHHHHHHHHHHH-
Confidence 3456678899999999865 999999999999987 68999999999999999999999
Q ss_pred hhCCCCCHHHHHHHHHhccccccCCCCcccccCCCCCCCCCCCCCCccCccccCC
Q 039556 305 AMQRDWSSAAIRSAMMTTAYLLDNANSTITDIRIGVSGTPLDFGSGHVNPNKAMD 359 (515)
Q Consensus 305 ~~~p~~s~~~i~~~L~~tA~~~~~~~~~~~~~~~~~~~~~~~~GaG~vn~~~A~~ 359 (515)
++|.+++++||++|++||+++... ...+|+|+||+.+|++
T Consensus 239 -~~p~~t~~~v~~~L~~ta~~~~~~--------------~~~~G~G~vn~~~A~~ 278 (279)
T 1thm_A 239 -ASQGRSASNIRAAIENTADKISGT--------------GTYWAKGRVNAYKAVQ 278 (279)
T ss_dssp -HTTTCCHHHHHHHHHHTCBCCTTB--------------TTTBSSEECCHHHHHH
T ss_pred -HCCCcCHHHHHHHHHHhCccCCCC--------------CccccCCeeCHHHHhc
Confidence 579999999999999999976421 1468999999999975
No 22
>2z30_A TK-subtilisin; thermococcus kodakaraensis, hydrolase; 1.65A {Thermococcus kodakarensis} PDB: 3a3o_A 3a3n_A 2zrq_A 2z57_A 2z56_A 2z58_A 3a3p_A 2z2x_A* 2z2y_A
Probab=99.79 E-value=1e-19 Score=185.85 Aligned_cols=99 Identities=34% Similarity=0.553 Sum_probs=87.1
Q ss_pred ecccCCCeeeecCCCCCCCCCCCCCCCceEeCCCcEEeeeCCCCCCCCCCCCCccccceEEecCcccchhHHHHHHHHHH
Q 039556 225 LGTKRAPQVAYFSSRGPDSQPPWILKPDILAPGVDILAAWVPNRPVKPIRKSDYLFSDYALMSGTSISCPHVAGIAALLK 304 (515)
Q Consensus 225 ~~~~~~~~va~fSs~Gp~~~~~~~lKPdi~APG~~I~sa~~~~~~~~~~~~~~~~~~~~~~~SGTSmAaPhVAG~aALl~ 304 (515)
...+..+.++.||++|| +|+|||++|+++++. +.|..++|||||||||||++|||+
T Consensus 205 ga~~~~~~~~~~S~~g~----------~v~APG~~i~s~~~~--------------~~~~~~sGTS~AaP~vaG~aAll~ 260 (320)
T 2z30_A 205 GAIDSNDNIASFSNRQP----------EVSAPGVDILSTYPD--------------DSYETLMGTAMATPHVSGVVALIQ 260 (320)
T ss_dssp EEECTTSCBCTTSCSSC----------SEEEECSSEEEEETT--------------TEEEEECSHHHHHHHHHHHHHHHH
T ss_pred EeeCCCCCcCcccCCCC----------CEEeCCCCeEEeccC--------------CCeEeccCHHHHHHHHHHHHHHHH
Confidence 34566788999999997 679999999999986 689999999999999999999999
Q ss_pred hhC-------------CCCCHHHHHHHHHhccccccCCCCcccccCCCCCCCCCCCCCCccCccccCC
Q 039556 305 AMQ-------------RDWSSAAIRSAMMTTAYLLDNANSTITDIRIGVSGTPLDFGSGHVNPNKAMD 359 (515)
Q Consensus 305 ~~~-------------p~~s~~~i~~~L~~tA~~~~~~~~~~~~~~~~~~~~~~~~GaG~vn~~~A~~ 359 (515)
|++ |.+++.+||.+|++||+++.. +.....+|+|+||+.+|++
T Consensus 261 ~~~~~~~~~~~~~~~~p~lt~~~v~~~L~~ta~~~~~------------~g~~~~~G~G~vd~~~A~~ 316 (320)
T 2z30_A 261 AAYYQKYGKILPVGTFDDISKNTVRGILHITADDLGP------------TGWDADYGYGVVRAALAVQ 316 (320)
T ss_dssp HHHHHHHSSCCCCCCTTCCSTTSHHHHHHHHSBCCSS------------SSSBTTTBTCBCCHHHHHH
T ss_pred HhchhhcccccccccCCCCCHHHHHHHHHhhCccCCC------------CCCCCCcCCceeCHHHHHH
Confidence 999 999999999999999987632 2234579999999999986
No 23
>4h6w_A N-terminal cyanobactin protease; hydrolase; 2.45A {Planktothrix agardhii nies-596}
Probab=99.78 E-value=4e-20 Score=187.27 Aligned_cols=106 Identities=27% Similarity=0.329 Sum_probs=90.4
Q ss_pred ecccCCCeeeecCCCCCCCCCCCCCCCceEeCCCcEEeeeCCCCCCCCCCCCCccccceEEecCcccchhHHHHHHHHHH
Q 039556 225 LGTKRAPQVAYFSSRGPDSQPPWILKPDILAPGVDILAAWVPNRPVKPIRKSDYLFSDYALMSGTSISCPHVAGIAALLK 304 (515)
Q Consensus 225 ~~~~~~~~va~fSs~Gp~~~~~~~lKPdi~APG~~I~sa~~~~~~~~~~~~~~~~~~~~~~~SGTSmAaPhVAG~aALl~ 304 (515)
...+..+.++.||++|+.. .||||+|||++|+++++. +.|..+||||||||||||++|||+
T Consensus 178 ga~~~~~~~~~~s~~g~~~-----~~~di~APG~~i~s~~~~--------------~~~~~~sGTS~AaP~VaG~~All~ 238 (306)
T 4h6w_A 178 GAMDDQGKPVDFSNWGDAY-----QKQGILAPGKDILGAKPN--------------GGTIRLSGTSFATPIVSGVAALLL 238 (306)
T ss_dssp EEECTTSCBCSSSCBCHHH-----HHHEEEEECSSEEEECTT--------------SCEEEECSHHHHHHHHHHHHHHHH
T ss_pred EEecCCCCccccccccCCc-----CcceeecCCcCcccccCC--------------CceeccCCCcchhHHHHHHHHHHH
Confidence 3456778899999999754 588999999999999987 789999999999999999999998
Q ss_pred hh----CCCCCHHHHHHHHHhccccccCCCCcccccCCCCCCCCCCCCCCccCccccCC
Q 039556 305 AM----QRDWSSAAIRSAMMTTAYLLDNANSTITDIRIGVSGTPLDFGSGHVNPNKAMD 359 (515)
Q Consensus 305 ~~----~p~~s~~~i~~~L~~tA~~~~~~~~~~~~~~~~~~~~~~~~GaG~vn~~~A~~ 359 (515)
+. +|.++|++||++|++||+++...+ ......+|+|+||+.+|++
T Consensus 239 s~~~~~~p~~t~~~v~~~L~~tA~~~~~~~----------~~~~~~~G~G~ln~~~Av~ 287 (306)
T 4h6w_A 239 SLQIKRGEKPDPQKVKNALLASATPCNPKD----------TDDQSRCLMGKLNILDAIE 287 (306)
T ss_dssp HHHHHTTCCCCHHHHHHHHHHTCBCCCTTT----------CSCGGGGTTCBCCHHHHHH
T ss_pred HHHHhhCCCCCHHHHHHHHHhhCccCCCCC----------CCCCCCcceeecCHHHHHH
Confidence 65 599999999999999999875321 1223468999999999987
No 24
>3lpc_A APRB2; protease, subtilase, virulence factor, hydrolase; 1.70A {Dichelobacter nodosus} PDB: 3lpa_A 3lpd_A 3ti9_A 3ti7_A
Probab=99.77 E-value=2e-19 Score=184.84 Aligned_cols=108 Identities=29% Similarity=0.445 Sum_probs=89.2
Q ss_pred ecccCCCeeeecCCCCCCCCCCCCCCCceEeCCCcEEeeeCCCCCCCCCCCCCccccceEEecCcccchhHHHHHHHHHH
Q 039556 225 LGTKRAPQVAYFSSRGPDSQPPWILKPDILAPGVDILAAWVPNRPVKPIRKSDYLFSDYALMSGTSISCPHVAGIAALLK 304 (515)
Q Consensus 225 ~~~~~~~~va~fSs~Gp~~~~~~~lKPdi~APG~~I~sa~~~~~~~~~~~~~~~~~~~~~~~SGTSmAaPhVAG~aALl~ 304 (515)
.+....+.++.||++|| ||||+|||++|+++++..... ... ..|..++|||||||||||++|||+
T Consensus 226 ga~~~~~~~~~~S~~g~--------~~di~ApG~~i~s~~~~~~~~------~~~-~~~~~~sGTS~AaP~vaG~aAll~ 290 (340)
T 3lpc_A 226 GATTSRGIRASFSNYGV--------DVDLAAPGQDILSTVDSGTRR------PVS-DAYSFMAGTSMATPHVSGVAALVI 290 (340)
T ss_dssp EEECTTSSBCTTCCBST--------TCCEEEECSSEEEEEESCSSS------CCS-EEEEEECSHHHHHHHHHHHHHHHH
T ss_pred ecCCCCCCcCCCCCCCC--------CceEEecCCCeecccCCCCcC------CCC-CcceecccHhHHHHHHHHHHHHHH
Confidence 34567789999999998 459999999999998863211 001 469999999999999999999999
Q ss_pred hh-C---CCCCHHHHHHHHHhccccccCCCCcccccCCCCCCCCCCCCCCccCccccCCC
Q 039556 305 AM-Q---RDWSSAAIRSAMMTTAYLLDNANSTITDIRIGVSGTPLDFGSGHVNPNKAMDP 360 (515)
Q Consensus 305 ~~-~---p~~s~~~i~~~L~~tA~~~~~~~~~~~~~~~~~~~~~~~~GaG~vn~~~A~~p 360 (515)
|+ + |.+++++||.+|++||++... .....+|+|+||+.+|++.
T Consensus 291 ~~~~~~~p~lt~~~v~~~L~~tA~~~~~-------------~~~~~~G~G~vd~~~Av~~ 337 (340)
T 3lpc_A 291 SAANSVNKNLTPAELKDVLVSTTSPFNG-------------RLDRALGSGIVDAEAAVNS 337 (340)
T ss_dssp HHHHHTTCCCCHHHHHHHHHHTCBCCSS-------------CCSSCCCSSBCCHHHHHHH
T ss_pred HhhhhhCCCCCHHHHHHHHHhcCCcCCC-------------CCCCCcccceecHHHHHHH
Confidence 98 6 999999999999999987631 1245899999999999873
No 25
>1sh7_A Extracellular subtilisin-like serine proteinase; cold adaptation, psychrotrophic, subtilisin-like proteinase, depentent, hydrolase; HET: PMS; 1.84A {Vibrio SP} PDB: 1s2n_A*
Probab=99.74 E-value=5.7e-18 Score=170.17 Aligned_cols=82 Identities=30% Similarity=0.443 Sum_probs=74.7
Q ss_pred eecccCCCeeeecCCCCCCCCCCCCCCCceEeCCCcEEeeeCCCCCCCCCCCCCccccceEEecCcccchhHHHHHHHHH
Q 039556 224 KLGTKRAPQVAYFSSRGPDSQPPWILKPDILAPGVDILAAWVPNRPVKPIRKSDYLFSDYALMSGTSISCPHVAGIAALL 303 (515)
Q Consensus 224 ~~~~~~~~~va~fSs~Gp~~~~~~~lKPdi~APG~~I~sa~~~~~~~~~~~~~~~~~~~~~~~SGTSmAaPhVAG~aALl 303 (515)
+...+..+.++.||++||.+ ||+|||++|+++++. +.|..++|||||||||||++|||
T Consensus 176 Vga~~~~~~~~~~S~~G~~~--------di~ApG~~i~s~~~~--------------~~~~~~sGTS~AaP~vaG~aAll 233 (284)
T 1sh7_A 176 VGSTTSSDSRSSFSNWGSCV--------DLFAPGSQIKSAWYD--------------GGYKTISGTSMATPHVAGVAALY 233 (284)
T ss_dssp EEEECTTSBBCTTCCBSTTC--------CEEEECSSEEEECTT--------------SSEEEECSHHHHHHHHHHHHHHH
T ss_pred EEEecCCCCcCcccCCCCcc--------EEEeccCCeEEecCC--------------CCEEEccChHHHHHHHHHHHHHH
Confidence 34456678999999999965 999999999999886 68999999999999999999999
Q ss_pred HhhCCCCCHHHHHHHHHhcccccc
Q 039556 304 KAMQRDWSSAAIRSAMMTTAYLLD 327 (515)
Q Consensus 304 ~~~~p~~s~~~i~~~L~~tA~~~~ 327 (515)
++++|++++++||++|++||++..
T Consensus 234 ~~~~p~lt~~~v~~~L~~tA~~~~ 257 (284)
T 1sh7_A 234 LQENNGLTPLQLTGLLNSRASENK 257 (284)
T ss_dssp HHHCTTCCHHHHHHHHHHHSEESC
T ss_pred HHHCCCCCHHHHHHHHHhhCccCC
Confidence 999999999999999999998754
No 26
>2pwa_A Proteinase K; structure, alanine boronic acid, hydrolase; 0.83A {Engyodontium album} SCOP: c.41.1.1 PDB: 1p7v_A 1p7w_A 2dqk_A 2duj_A 2g4v_A 2hd4_A 2hpz_A 2id8_A 2pq2_A 1ic6_A 2pwb_A* 2pyz_A* 2v8b_A 3aj8_A 3aj9_A 3dyb_A* 3gt3_A* 3gt4_A* 3l1k_A 3osz_A ...
Probab=99.73 E-value=5.3e-18 Score=169.99 Aligned_cols=80 Identities=34% Similarity=0.473 Sum_probs=73.2
Q ss_pred eecccCCCeeeecCCCCCCCCCCCCCCCceEeCCCcEEeeeCCCCCCCCCCCCCccccceEEecCcccchhHHHHHHHHH
Q 039556 224 KLGTKRAPQVAYFSSRGPDSQPPWILKPDILAPGVDILAAWVPNRPVKPIRKSDYLFSDYALMSGTSISCPHVAGIAALL 303 (515)
Q Consensus 224 ~~~~~~~~~va~fSs~Gp~~~~~~~lKPdi~APG~~I~sa~~~~~~~~~~~~~~~~~~~~~~~SGTSmAaPhVAG~aALl 303 (515)
+...+..+.++.||++||.+ ||+|||++|+++++. +.|..++|||||||||||++|||
T Consensus 180 Vga~~~~~~~~~~S~~G~~~--------di~APG~~i~s~~~~--------------~~~~~~sGTS~AaP~VaG~aAll 237 (279)
T 2pwa_A 180 VGASDRYDRRSSFSNYGSVL--------DIFGPGTDILSTWIG--------------GSTRSISGTSMATPHVAGLAAYL 237 (279)
T ss_dssp EEEECTTSBBCTTCCBSTTC--------CEEEECSSEEEEETT--------------TEEEEECSHHHHHHHHHHHHHHH
T ss_pred EEEecCCCCcCCcCCCCCcc--------eEEEecCCeEEeecC--------------CCEEEcCChHHHHHHHHHHHHHH
Confidence 34456678999999999965 999999999999987 68999999999999999999999
Q ss_pred HhhCCCCCHHHHHHHHHhccccc
Q 039556 304 KAMQRDWSSAAIRSAMMTTAYLL 326 (515)
Q Consensus 304 ~~~~p~~s~~~i~~~L~~tA~~~ 326 (515)
+++ |.++|.+||.+|++||++.
T Consensus 238 ~~~-p~lt~~~v~~~L~~tA~~~ 259 (279)
T 2pwa_A 238 MTL-GKTTAASACRYIADTANKG 259 (279)
T ss_dssp HHT-TSCCTTTHHHHHHHHSEES
T ss_pred HhC-CCCCHHHHHHHHHHhCccc
Confidence 999 9999999999999999875
No 27
>2oxa_A Extracellular serine protease; kexin, hydrolase; 1.65A {Aeromonas sobria} PDB: 3hjr_A
Probab=99.73 E-value=6e-18 Score=186.72 Aligned_cols=128 Identities=19% Similarity=0.129 Sum_probs=91.3
Q ss_pred eecccCCCeeeecCCCCCCCCCCCCCCCceEeCCCcEEeeeCCCC------CCCC---------------CCCCCccccc
Q 039556 224 KLGTKRAPQVAYFSSRGPDSQPPWILKPDILAPGVDILAAWVPNR------PVKP---------------IRKSDYLFSD 282 (515)
Q Consensus 224 ~~~~~~~~~va~fSs~Gp~~~~~~~lKPdi~APG~~I~sa~~~~~------~~~~---------------~~~~~~~~~~ 282 (515)
+...+..+.++.||++||.. ||+|||++|.+..+... ...+ ...+... ..
T Consensus 258 VgA~~~~g~~a~fS~~G~~v--------dv~APG~~i~~~~p~i~ttd~~g~~~g~~~~~~~~~~~~~~~~~~~~~~-~~ 328 (600)
T 2oxa_A 258 VSALNADGVRSSYSSVGSNI--------FLSATGGEYGTDTPAMVTTDLPGCDMGYNRTDDPSTNRLHGNSQLDASC-DY 328 (600)
T ss_dssp EEEECTTSSBCTTCCBCTTE--------EEEEECCSCSSSSCCEEEECCSSTTSSSSSTTSCCSSTTTTCTTTCTTC-CE
T ss_pred EecccCCCCcCCcCCCCCCe--------EEEeccCCCCcCCCceEeccccccccccccccccccccccccccccCCc-cc
Confidence 34456778999999999987 99999999655433200 0000 0000111 33
Q ss_pred eEEecCcccchhHHHHHHHHHHhhCCCCCHHHHHHHHHhccccccCCCCcccc---------------c----CCCCCCC
Q 039556 283 YALMSGTSISCPHVAGIAALLKAMQRDWSSAAIRSAMMTTAYLLDNANSTITD---------------I----RIGVSGT 343 (515)
Q Consensus 283 ~~~~SGTSmAaPhVAG~aALl~~~~p~~s~~~i~~~L~~tA~~~~~~~~~~~~---------------~----~~~~~~~ 343 (515)
|..++|||||||||||++|||+|++|.|+|++||.+|++||++++..+.++.. . .......
T Consensus 329 y~~~sGTS~AaP~VAGvaALl~s~~P~lt~~~vk~~L~~tA~~~~~~~~~~~~~~~~~~G~~~~~~~~~~w~~n~~g~~~ 408 (600)
T 2oxa_A 329 NGVMNGTSSATPSTSGAMALLMSAYPDLSVRDLRDLLARSATRVDAKHQPVMVSYTSSTGKVRDVKGLEGWERNAAGMWF 408 (600)
T ss_dssp EEEECSHHHHHHHHHHHHHHHHHHSTTSCHHHHHHHHHHHCBCCSTTCCCEEEEEECTTSCEEEEEEECCSEECTTSCEE
T ss_pred ccccccchHHhHHHHHHHHHHHHhCCCCCHHHHHHHHHHhCccCCcccccccccccccccccccccccccccccCCCccc
Confidence 89999999999999999999999999999999999999999988654322110 0 0011223
Q ss_pred CCCCCCCccCccccCCC
Q 039556 344 PLDFGSGHVNPNKAMDP 360 (515)
Q Consensus 344 ~~~~GaG~vn~~~A~~p 360 (515)
.+.||+|+||+.+|++.
T Consensus 409 ~~~~G~G~vda~~Av~~ 425 (600)
T 2oxa_A 409 SPTYGFGLIDVNKALEL 425 (600)
T ss_dssp BTTTBTCBCCHHHHHHH
T ss_pred cccCCCchhhHHHHHHH
Confidence 47899999999999974
No 28
>4dzt_A Aqualysin-1, aqualysin-I; serine protease, calcium binding, inhibitor, hydrolase-hydro inhibitor complex; HET: PMS; 1.95A {Thermus aquaticus}
Probab=99.72 E-value=1.1e-17 Score=167.28 Aligned_cols=84 Identities=32% Similarity=0.443 Sum_probs=75.8
Q ss_pred eecccCCCeeeecCCCCCCCCCCCCCCCceEeCCCcEEeeeCCCCCCCCCCCCCccccceEEecCcccchhHHHHHHHHH
Q 039556 224 KLGTKRAPQVAYFSSRGPDSQPPWILKPDILAPGVDILAAWVPNRPVKPIRKSDYLFSDYALMSGTSISCPHVAGIAALL 303 (515)
Q Consensus 224 ~~~~~~~~~va~fSs~Gp~~~~~~~lKPdi~APG~~I~sa~~~~~~~~~~~~~~~~~~~~~~~SGTSmAaPhVAG~aALl 303 (515)
+...+..+.++.||++||.. ||+|||++|+++++... ..|..++|||||||||||++||+
T Consensus 176 Vga~~~~~~~~~~S~~g~~~--------dv~ApG~~i~s~~~~~~------------~~~~~~sGTS~AaP~vaG~aAll 235 (276)
T 4dzt_A 176 VGATTSSDARASFSNYGSCV--------DLFAPGASIPSAWYTSD------------TATQTLNGTSMATPHVAGVAALY 235 (276)
T ss_dssp EEEECTTSBBCTTCCBSTTC--------CEEEECSSEEEECTTSS------------SCEEEECSHHHHHHHHHHHHHHH
T ss_pred EEEECCCCCcCCcCCCCCCc--------eEEeCCCCeEccccCCC------------CceEEeeEHHHHHHHHHHHHHHH
Confidence 34456778999999999976 99999999999988743 58999999999999999999999
Q ss_pred HhhCCCCCHHHHHHHHHhcccccc
Q 039556 304 KAMQRDWSSAAIRSAMMTTAYLLD 327 (515)
Q Consensus 304 ~~~~p~~s~~~i~~~L~~tA~~~~ 327 (515)
+|++|++++++||.+|++||++..
T Consensus 236 ~~~~p~lt~~~v~~~L~~tA~~~~ 259 (276)
T 4dzt_A 236 LEQNPSATPASVASAILNGATTGR 259 (276)
T ss_dssp HHHCTTCCHHHHHHHHHHHSEESC
T ss_pred HHHCCCCCHHHHHHHHHhhCcCCc
Confidence 999999999999999999998764
No 29
>2b6n_A Proteinase K; S binding, substrate specificity, proteinase K, subtilase, psychrotrophic, psychrophilic, hydrolase; 1.80A {Serratia SP}
Probab=99.71 E-value=1.6e-17 Score=166.21 Aligned_cols=83 Identities=34% Similarity=0.428 Sum_probs=74.2
Q ss_pred eecccCCCeeeecCCCCCCCCCCCCCCCceEeCCCcEEeeeCCCCCCCCCCCCCccccceEEecCcccchhHHHHHHHHH
Q 039556 224 KLGTKRAPQVAYFSSRGPDSQPPWILKPDILAPGVDILAAWVPNRPVKPIRKSDYLFSDYALMSGTSISCPHVAGIAALL 303 (515)
Q Consensus 224 ~~~~~~~~~va~fSs~Gp~~~~~~~lKPdi~APG~~I~sa~~~~~~~~~~~~~~~~~~~~~~~SGTSmAaPhVAG~aALl 303 (515)
+...+..+.++.||++||.+ ||+|||++|+++++... +.|..++|||||||||||++|||
T Consensus 178 Vga~~~~~~~~~~S~~G~~~--------di~ApG~~i~s~~~~~~------------~~~~~~sGTS~AaP~vaG~aAll 237 (278)
T 2b6n_A 178 VGSTTSNDSRSSFSNYGTCL--------DIYAPGSSITSSWYTSN------------SATNTISGTSMASPHVAGVAALY 237 (278)
T ss_dssp EEEECTTSBBCTTCCBSTTC--------CEEEECSSEEEECTTST------------TCEEEECSHHHHHHHHHHHHHHH
T ss_pred EEeeCCCCCcCCcCCCCCCC--------eEEeCCCCeECcccCCC------------CCEEEeCcHHHHHHHHHHHHHHH
Confidence 34456678899999999855 99999999999987632 67999999999999999999999
Q ss_pred HhhCCCCCHHHHHHHHHhccccc
Q 039556 304 KAMQRDWSSAAIRSAMMTTAYLL 326 (515)
Q Consensus 304 ~~~~p~~s~~~i~~~L~~tA~~~ 326 (515)
++++|.+++++||.+|++||++.
T Consensus 238 ~~~~p~lt~~~v~~~L~~tA~~~ 260 (278)
T 2b6n_A 238 LDENPNLSPAQVTNLLKTRATAD 260 (278)
T ss_dssp HHHCTTCCHHHHHHHHHHHSEES
T ss_pred HHhCCCCCHHHHHHHHHHhCccC
Confidence 99999999999999999999864
No 30
>2qtw_B Proprotein convertase subtilisin/kexin type 9; coronary heart disease, hypercholest low density lipoprotein receptor, autocatalytic cleavage; HET: NAG; 1.90A {Homo sapiens} PDB: 3m0c_B 3bps_A 3gcw_A 3gcx_A 3p5b_A 3p5c_A 2pmw_B 3h42_B 2w2n_A 2w2m_A 2w2p_A 2w2q_A 2xtj_A 2w2o_A
Probab=99.71 E-value=2.1e-17 Score=178.25 Aligned_cols=112 Identities=22% Similarity=0.188 Sum_probs=84.0
Q ss_pred cccCCCeeee----cCCCCCCCCCCCCCCCceEeCCCcEEeeeCCCCCCCCCCCCCccccceEEecCcccchhHHHHHHH
Q 039556 226 GTKRAPQVAY----FSSRGPDSQPPWILKPDILAPGVDILAAWVPNRPVKPIRKSDYLFSDYALMSGTSISCPHVAGIAA 301 (515)
Q Consensus 226 ~~~~~~~va~----fSs~Gp~~~~~~~lKPdi~APG~~I~sa~~~~~~~~~~~~~~~~~~~~~~~SGTSmAaPhVAG~aA 301 (515)
..+..+.++. ||++||. |||+|||++|+++++... ..|..++|||||||||||++|
T Consensus 186 A~d~~g~~a~~s~~fSn~G~~--------vDI~APG~~I~St~~~~~------------~~y~~~SGTSmAAP~VAG~aA 245 (546)
T 2qtw_B 186 ATNAQDQPVTLGTLGTNFGRC--------VDLFAPGEDIIGASSDCS------------TCFVSQSGTSQAAAHVAGIAA 245 (546)
T ss_dssp EECTTSCBCEETTEECCBSTT--------CCEEEECSSEEEECTTST------------TCEEEECSHHHHHHHHHHHHH
T ss_pred EecCCCCcccccCCcCCCCCc--------ceEEecCccEEeeccCCC------------CcEeeeCcCcHHHHHHHHHHH
Confidence 3445566666 8999984 499999999999998642 579999999999999999999
Q ss_pred HHHhhCCCCCHHHHHHHHHhccccccCCC----------CcccccCCCCCCCCCCCCCCc--cCccccCC
Q 039556 302 LLKAMQRDWSSAAIRSAMMTTAYLLDNAN----------STITDIRIGVSGTPLDFGSGH--VNPNKAMD 359 (515)
Q Consensus 302 Ll~~~~p~~s~~~i~~~L~~tA~~~~~~~----------~~~~~~~~~~~~~~~~~GaG~--vn~~~A~~ 359 (515)
||++++|.|+|+|||++|++||.+..... .|.+- .......+.+|+|+ .++..+..
T Consensus 246 Llls~~P~ltp~qVr~~L~~tAt~~~i~~~~~p~~~~~~tpN~l--~~~~~~~~~~G~~l~~~~~w~a~s 313 (546)
T 2qtw_B 246 MMLSAEPELTLAELRQRLIHFSAKDVINEAWFPEDQRVLTPNLV--AALPPSTHGAGWQLFCRTVWSAHS 313 (546)
T ss_dssp HHHHHSTTCCHHHHHHHHHHTSEESCSCGGGSCHHHHTTSCCEE--CCCCCTTCC--CCCEEEEEECCCC
T ss_pred HHHHHCCCCCHHHHHHHHHHhccccccCCccCccccCCCCccch--hccCCcccccCCCcchhchhccCC
Confidence 99999999999999999999997543211 11100 01122466788888 77777764
No 31
>1p8j_A Furin precursor; prohormone convertase, SPC1, PACE, P-domain; HET: DKA AR7 NAG FUL BMA MAN GAL FUC; 2.60A {Mus musculus} SCOP: b.18.1.20 c.41.1.1
Probab=99.67 E-value=2.8e-17 Score=176.26 Aligned_cols=121 Identities=13% Similarity=0.080 Sum_probs=92.9
Q ss_pred eecccCCCeeeecCCCCCCCCCCCCCCCceEeCCCcEEeeeCCCCCCCCCCCCCccccceEEecCcccchhHHHHHHHHH
Q 039556 224 KLGTKRAPQVAYFSSRGPDSQPPWILKPDILAPGVDILAAWVPNRPVKPIRKSDYLFSDYALMSGTSISCPHVAGIAALL 303 (515)
Q Consensus 224 ~~~~~~~~~va~fSs~Gp~~~~~~~lKPdi~APG~~I~sa~~~~~~~~~~~~~~~~~~~~~~~SGTSmAaPhVAG~aALl 303 (515)
+.+.+..+.++.||++||... ...+|...+||.+|+++.+.. ..|..++|||||||||||++|||
T Consensus 210 VgA~~~~g~~a~~S~~g~~~~--~~~~~~~~~~g~~i~st~~~~-------------~~~~~~sGTS~AaP~VAG~aALl 274 (471)
T 1p8j_A 210 ISSATQFGNVPWYSEACSSTL--ATTYSSGNQNEKQIVTTDLRQ-------------KCTESHTGTSASAPLAAGIIALT 274 (471)
T ss_dssp EEEECTTSCCCTTCCBCTTCC--EEEECCCSTTSCCEEEEETTT-------------EEEEEECSHHHHHHHHHHHHHHH
T ss_pred EecccCCCCcccccCCCCcce--EEeCCCCCCCCCCEEEeeCCC-------------CccccCCCcccccchhhhHHHHH
Confidence 344566788999999999874 333455555678999998752 46899999999999999999999
Q ss_pred HhhCCCCCHHHHHHHHHhccccccCCCCcccccCCCCCCCCCCCCCCccCccccCCC
Q 039556 304 KAMQRDWSSAAIRSAMMTTAYLLDNANSTITDIRIGVSGTPLDFGSGHVNPNKAMDP 360 (515)
Q Consensus 304 ~~~~p~~s~~~i~~~L~~tA~~~~~~~~~~~~~~~~~~~~~~~~GaG~vn~~~A~~p 360 (515)
+|++|+|++++||.+|+.||++.+.......... ........||+|+||+.+|++.
T Consensus 275 ~~~~p~lt~~~v~~~L~~tA~~~~~~~~~~~~n~-~g~~~~~~~G~G~vda~~Av~~ 330 (471)
T 1p8j_A 275 LEANKNLTWRDMQHLVVQTSKPAHLNADDWATNG-VGRKVSHSYGYGLLDAGAMVAL 330 (471)
T ss_dssp HHHCTTCCHHHHHHHHHHHCBCTTCCCSCCEECT-TSCEEBTTTBTCBCCHHHHHHH
T ss_pred HhhCCCCCHHHHHHHHHhcCccCCCCCCCceecC-CCcccCCCCCCEEEcHhHHHHH
Confidence 9999999999999999999998754322111110 1112346899999999999973
No 32
>3f7m_A Alkaline serine protease VER112; verticillium psalliotae, cuticle- degrading protease, nematodes, hydrolase, secreted, zymogen; 1.60A {Lecanicillium psalliotae} SCOP: c.41.1.1 PDB: 3f7o_A
Probab=99.67 E-value=6.7e-17 Score=161.69 Aligned_cols=81 Identities=31% Similarity=0.429 Sum_probs=73.7
Q ss_pred eecccCCCeeeecCCCCCCCCCCCCCCCceEeCCCcEEeeeCCCCCCCCCCCCCccccceEEecCcccchhHHHHHHHHH
Q 039556 224 KLGTKRAPQVAYFSSRGPDSQPPWILKPDILAPGVDILAAWVPNRPVKPIRKSDYLFSDYALMSGTSISCPHVAGIAALL 303 (515)
Q Consensus 224 ~~~~~~~~~va~fSs~Gp~~~~~~~lKPdi~APG~~I~sa~~~~~~~~~~~~~~~~~~~~~~~SGTSmAaPhVAG~aALl 303 (515)
+...+..+.++.||++||.. ||+|||++|+++++. +.|..++|||||||||||++|||
T Consensus 181 Vga~~~~~~~~~~S~~g~~~--------di~ApG~~i~s~~~~--------------~~~~~~sGTS~AaP~vaG~aAll 238 (279)
T 3f7m_A 181 VGATDSNDVRSTFSNYGRVV--------DIFAPGTSITSTWIG--------------GRTNTISGTSMATPHIAGLAAYL 238 (279)
T ss_dssp EEEECTTSBBCTTCCBSTTC--------CEEEECSSEEEECGG--------------GCEEEECSHHHHHHHHHHHHHHH
T ss_pred EeecCCCCCCCCCCCCCCCC--------eEEECCCCeEeecCC--------------CCEEEeeEHHHHHHHHHHHHHHH
Confidence 34456778999999999965 999999999999887 68999999999999999999999
Q ss_pred HhhCCCCCHHHHHHHHHhcccccc
Q 039556 304 KAMQRDWSSAAIRSAMMTTAYLLD 327 (515)
Q Consensus 304 ~~~~p~~s~~~i~~~L~~tA~~~~ 327 (515)
++++|. ++++||.+|+.||++..
T Consensus 239 ~~~~p~-t~~~v~~~L~~tA~~~~ 261 (279)
T 3f7m_A 239 FGLEGG-SAGAMCGRIQTLSTKNV 261 (279)
T ss_dssp HHHTCC-CTTTHHHHHHHHSEESC
T ss_pred HHhCCC-CHHHHHHHHHHhccccc
Confidence 999999 99999999999998753
No 33
>2id4_A Kexin; KEX2, kexin, furin, proprotein, prohormone, convertase, SUBT like protease, serine protease; HET: NDG; 1.90A {Saccharomyces cerevisiae} SCOP: b.18.1.20 c.41.1.1 PDB: 1r64_A* 1ot5_A*
Probab=99.67 E-value=5e-17 Score=175.72 Aligned_cols=115 Identities=15% Similarity=0.126 Sum_probs=90.8
Q ss_pred eecccCCCeeeecCCCCCCCCCCCCCCCceEe----CCCcEEeeeCCCCCCCCCCCCCccccceEEecCcccchhHHHHH
Q 039556 224 KLGTKRAPQVAYFSSRGPDSQPPWILKPDILA----PGVDILAAWVPNRPVKPIRKSDYLFSDYALMSGTSISCPHVAGI 299 (515)
Q Consensus 224 ~~~~~~~~~va~fSs~Gp~~~~~~~lKPdi~A----PG~~I~sa~~~~~~~~~~~~~~~~~~~~~~~SGTSmAaPhVAG~ 299 (515)
+...+..+.++.||++||.. |+.| ||.+|++++... ..|..++|||||||||||+
T Consensus 223 VgA~~~~~~~a~~S~~g~~~--------~~~a~~~gpG~~I~st~~~~-------------~~~~~~sGTS~AaP~VAG~ 281 (503)
T 2id4_A 223 IGAIDHKDLHPPYSEGCSAV--------MAVTYSSGSGEYIHSSDING-------------RCSNSHGGTSAAAPLAAGV 281 (503)
T ss_dssp EEEECTTSCCCTTCCCCTTE--------EEEEECSBTTBCEEEECSTT-------------CEEEEECSHHHHHHHHHHH
T ss_pred EEeeCCCCCcCCcCCCCCcc--------eEeecCCCCCCceEeecCCC-------------CceecCCCccccchhhhHH
Confidence 34456678899999999987 8877 899999995541 6799999999999999999
Q ss_pred HHHHHhhCCCCCHHHHHHHHHhccccccCC-CCcccccCCCCCCCCCCCCCCccCccccCCC
Q 039556 300 AALLKAMQRDWSSAAIRSAMMTTAYLLDNA-NSTITDIRIGVSGTPLDFGSGHVNPNKAMDP 360 (515)
Q Consensus 300 aALl~~~~p~~s~~~i~~~L~~tA~~~~~~-~~~~~~~~~~~~~~~~~~GaG~vn~~~A~~p 360 (515)
+|||+|++|.+++++||.+|+.||++++.. ........ ........+|+|+||+.+|++.
T Consensus 282 aALl~~~~p~lt~~~v~~~L~~tA~~~~~~~~~~~~~~~-~g~~~~~~~G~G~vda~~Av~~ 342 (503)
T 2id4_A 282 YTLLLEANPNLTWRDVQYLSILSAVGLEKNADGDWRDSA-MGKKYSHRYGFGKIDAHKLIEM 342 (503)
T ss_dssp HHHHHHHCTTCCHHHHHHHHHHHCBCCTTCGGGCCEECS-SSSEEBTTTBTCBCCHHHHHHH
T ss_pred HHHHHHhCCCCCHHHHHHHHHhccccCCCCcCCCceecC-CCCccCcccCCcEecHHHHHHH
Confidence 999999999999999999999999987543 11111000 1112245899999999999873
No 34
>3hjr_A Extracellular serine protease; kexin, hydrolase; 1.65A {Aeromonas sobria}
Probab=99.62 E-value=3.8e-16 Score=172.20 Aligned_cols=127 Identities=19% Similarity=0.149 Sum_probs=90.0
Q ss_pred eecccCCCeeeecCCCCCCCCCCCCCCCceEeCCCcE--------EeeeCCCCCCCC-------------CCCCCccccc
Q 039556 224 KLGTKRAPQVAYFSSRGPDSQPPWILKPDILAPGVDI--------LAAWVPNRPVKP-------------IRKSDYLFSD 282 (515)
Q Consensus 224 ~~~~~~~~~va~fSs~Gp~~~~~~~lKPdi~APG~~I--------~sa~~~~~~~~~-------------~~~~~~~~~~ 282 (515)
+......+.++.||++|+.. +++|||.++ ....++...... ...+... ..
T Consensus 258 VgA~~~~g~~a~yS~~G~~v--------~~~apg~~~~~~~~~~vt~~~pG~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 328 (600)
T 3hjr_A 258 VSALNADGVRSSYSSVGSNI--------FLSATGGEYGTDTPAMVTTDLPGCDMGYNRTDDPSTNRLHGNSQLDASC-DY 328 (600)
T ss_dssp EEEECTTSSBCTTCCBCTTC--------CEEEECCSCSSSSCCEEEECCSSTTSSSSSTTSCCSSTTTTCTTTCTTC-CE
T ss_pred EeeecCCCCEeecccCCcce--------eeccCCCCCCCCCcceeeecCCCccccccccCCccccccccccccCCCC-Cc
Confidence 34456778999999999987 899999763 222222110000 0001111 45
Q ss_pred eEEecCcccchhHHHHHHHHHHhhCCCCCHHHHHHHHHhccccccCCCCcccccC-------------------CCCCCC
Q 039556 283 YALMSGTSISCPHVAGIAALLKAMQRDWSSAAIRSAMMTTAYLLDNANSTITDIR-------------------IGVSGT 343 (515)
Q Consensus 283 ~~~~SGTSmAaPhVAG~aALl~~~~p~~s~~~i~~~L~~tA~~~~~~~~~~~~~~-------------------~~~~~~ 343 (515)
|..++|||||||||||++|||+|+||+|+++|||.+|++||++++....|+.... .....-
T Consensus 329 ~~~~sGTSmAaP~VAGvaALll~a~P~lt~~~v~~~L~~TA~~~d~~~~p~~~~~~~~~~~~~~~~~~~~w~~N~aG~~~ 408 (600)
T 3hjr_A 329 NGVMNGTSSATPSTSGAMALLMSAYPDLSVRDLRDLLARSATRVDAKHQPVMVSYTSSTGKVRDVKGLEGWERNAAGMWF 408 (600)
T ss_dssp EEEECSHHHHHHHHHHHHHHHHHHSTTSCHHHHHHHHHHHCBCCSTTCCCEEEEEECTTSCEEEEEEECCSEECTTSCEE
T ss_pred eeccccccccchhHHHHHHHHHHHCCCCCHHHHHHHHHhhCccCCCCCCcccccccccccccccccccCCcccccCCceE
Confidence 8899999999999999999999999999999999999999999987665532110 000111
Q ss_pred CCCCCCCccCccccCC
Q 039556 344 PLDFGSGHVNPNKAMD 359 (515)
Q Consensus 344 ~~~~GaG~vn~~~A~~ 359 (515)
...||+|+||+.+|++
T Consensus 409 s~~yGfG~vDA~~aV~ 424 (600)
T 3hjr_A 409 SPTYGFGLIDVNKALE 424 (600)
T ss_dssp BTTTBTCBCCHHHHHH
T ss_pred ccccCCceecHHHHHH
Confidence 3478999999999886
No 35
>3cnq_P Subtilisin BPN'; uncleaved, proenzyme, substrate complex, hydrolase, metal- binding, protease, secreted, serine protease, sporulation; 1.71A {Bacillus amyloliquefaciens} PDB: 3bgo_P 3co0_P 1spb_P 1scj_B
Probab=99.10 E-value=6.6e-11 Score=95.83 Aligned_cols=48 Identities=17% Similarity=0.143 Sum_probs=44.2
Q ss_pred CCceEEEeccccceEEeecCHHHHHhhcCCCCeEEEEeCcccccccccc
Q 039556 15 TPTHLYTYNHVVDGFSAVLSQTHLDQLQKLPGHHATYIETFGHLHTTYT 63 (515)
Q Consensus 15 ~~~i~ysY~~~~~GFaA~lt~~~~~~L~~~p~V~~Ve~D~~~~l~tt~s 63 (515)
..+++|+|++ |+||+++|+++++++|+++|+|++||||++++++||+|
T Consensus 33 g~~i~~~y~~-~~Gfaa~l~~~~~~~L~~~p~V~~Ve~D~~v~~~tt~~ 80 (80)
T 3cnq_P 33 GGKLQKCFKY-VDAASATLNEKAVEELKKDPSVAYVEEDKLYRALSATS 80 (80)
T ss_dssp TCEEEEECSS-SSEEEEECCHHHHHHHHTCTTEEEEEECCEEEECCC--
T ss_pred CCcceEEEcc-cEEEEEEcCHHHHHHHHhCCCccEEEeCcEEEEeeecC
Confidence 4689999999 99999999999999999999999999999999998875
No 36
>2w2n_P Proprotein convertase subtilisin/kexin type 9; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2m_P 2w2o_P 2w2p_P 2w2q_P 2xtj_P
Probab=98.91 E-value=7.4e-10 Score=95.95 Aligned_cols=45 Identities=18% Similarity=0.137 Sum_probs=42.3
Q ss_pred CCCceEEEeccccceEEeecCHHHHHhhcCCCCeEEEEeCccccc
Q 039556 14 DTPTHLYTYNHVVDGFSAVLSQTHLDQLQKLPGHHATYIETFGHL 58 (515)
Q Consensus 14 ~~~~i~ysY~~~~~GFaA~lt~~~~~~L~~~p~V~~Ve~D~~~~l 58 (515)
...+++|+|+++|+||+|+|+++++++|+++|+|++||||+++++
T Consensus 69 ~~~~i~~sY~~~~~GFaa~Lt~~~~~~L~~~P~V~~VE~D~~v~~ 113 (114)
T 2w2n_P 69 YLTKILHVFHGLLPGFLVKMSGDLLELALKLPHVDYIEEDSSVFA 113 (114)
T ss_dssp CCCEEEEEECSSSSEEEEECCGGGHHHHHTSTTEEEEEEEEEEEE
T ss_pred cCCceEEEecccceEEEEEcCHHHHHHHHcCCCccEEEeCceEec
Confidence 356899999999999999999999999999999999999999875
No 37
>1ga6_A Serine-carboxyl proteinase; serine-carboxyl proteinase, hydrolase-hydrolase inhibitor CO; 1.00A {Pseudomonas SP} SCOP: c.41.1.2 PDB: 1ga4_A* 1ga1_A 1kdv_A* 1kdy_A* 1kdz_A* 1ke1_A* 1ke2_A* 1nlu_A*
Probab=98.79 E-value=4e-09 Score=109.51 Aligned_cols=111 Identities=19% Similarity=0.103 Sum_probs=68.5
Q ss_pred eecCCCCCCCCC--------CCCCCCceE---eCCCcEEeeeCCCCCCCCCCCCCccccceEEecCcccchhHHHHHHHH
Q 039556 234 AYFSSRGPDSQP--------PWILKPDIL---APGVDILAAWVPNRPVKPIRKSDYLFSDYALMSGTSISCPHVAGIAAL 302 (515)
Q Consensus 234 a~fSs~Gp~~~~--------~~~lKPdi~---APG~~I~sa~~~~~~~~~~~~~~~~~~~~~~~SGTSmAaPhVAG~aAL 302 (515)
..||+++|.... ..+.+|||+ |||.+++..+ . +.|..++|||||||||||++||
T Consensus 235 GGfS~~~~~P~yQ~~~~~~~~gR~~PDVsa~aapg~~~~~~~-~--------------g~~~~~~GTS~AaP~vAGi~AL 299 (372)
T 1ga6_A 235 GGYSVYESKPSWQSVVSGTPGRRLLPDISFDAAQGTGALIYN-Y--------------GQLQQIGGTSLASPIFVGLWAR 299 (372)
T ss_dssp CEEEEEEECCGGGGGSTTSCSEEEECSEEEECCGGGCEEEEE-T--------------TEEEEECSHHHHHHHHHHHHHH
T ss_pred CCcCCCCCCcccccccccCCCCccCCceecccCCCCCEEEEe-C--------------CcEEeccccchHHHHHHHHHHH
Confidence 357777665321 146689999 9999987654 2 5789999999999999999999
Q ss_pred HHhhCC----CCCHHHHHHHHHhccccccC-CCCccc--ccCCCCCCCCCCCCCCccCccccCC
Q 039556 303 LKAMQR----DWSSAAIRSAMMTTAYLLDN-ANSTIT--DIRIGVSGTPLDFGSGHVNPNKAMD 359 (515)
Q Consensus 303 l~~~~p----~~s~~~i~~~L~~tA~~~~~-~~~~~~--~~~~~~~~~~~~~GaG~vn~~~A~~ 359 (515)
|+|+++ .+.|..-+.+-.....-.|. .|.... ......+..+...|.|.+|..++++
T Consensus 300 l~~~~~~~lG~~np~LY~~a~~~~~~f~Dit~G~n~~~~~g~~a~~GwD~~TGlGtpn~~~l~~ 363 (372)
T 1ga6_A 300 LQSANSNSLGFPAASFYSAISSTPSLVHDVKSGNNGYGGYGYNAGTGWDYPTGWGSLDIAKLSA 363 (372)
T ss_dssp HHHHTTTCCCCCHHHHHHHHHHCGGGEECCCSCBSSSTTCSCBCCSSSBTTTBTCEECHHHHHH
T ss_pred HHhcCCCCcCccCHHHHhhcccCCcceeecccCCCCCCCCCCCCCCCCCCCccCchhhHHHHHH
Confidence 999875 35565443221111111110 010000 0001233455678999999887665
No 38
>1t1e_A Kumamolisin; proenzyme, prosubtilase, activation mechanism, sedolisin, serine-carboxyl proteinase, hydrolase; 1.18A {Bacillus SP} SCOP: c.41.1.2 d.58.3.2 PDB: 1t1g_A 1t1i_A 1gt9_1 1gtg_1 1gtj_1* 1gtl_1* 1sio_A* 1sn7_A 1zvj_A 1siu_A 1zvk_A
Probab=98.73 E-value=6.4e-09 Score=113.30 Aligned_cols=95 Identities=13% Similarity=0.100 Sum_probs=58.8
Q ss_pred CCCCCceEeCC---CcEEeeeCCCCCCCCCCCCCccccceEEecCcccchhHHHHHHHHHHhhCC----CCCHHHHHHHH
Q 039556 247 WILKPDILAPG---VDILAAWVPNRPVKPIRKSDYLFSDYALMSGTSISCPHVAGIAALLKAMQR----DWSSAAIRSAM 319 (515)
Q Consensus 247 ~~lKPdi~APG---~~I~sa~~~~~~~~~~~~~~~~~~~~~~~SGTSmAaPhVAG~aALl~~~~p----~~s~~~i~~~L 319 (515)
++.+|||+||| .++ ..+.. +.|..++|||||||||||++|||+++++ .|.|..-+ +
T Consensus 435 gR~~PDVsA~a~p~~~~-~v~~~--------------g~~~~~~GTS~AaP~vAGv~ALl~~~~g~~lG~~np~LY~--~ 497 (552)
T 1t1e_A 435 GRGVPDVAGNADPATGY-EVVID--------------GETTVIGGTAAVAPLFAALVARINQKLGKPVGYLNPTLYQ--L 497 (552)
T ss_dssp CCEECSEEEECCGGGCE-EEEET--------------TEEEEEESGGGHHHHHHHHHHHHHHHHTSCCCCCHHHHTT--S
T ss_pred CCCCCceecccCCCCCe-EEEeC--------------CeEEeccccchhhHHHHHHHHHHhhhccCCCCCccHHHHh--c
Confidence 57789999994 454 34443 6899999999999999999999999865 34443221 1
Q ss_pred Hhcc-ccccCCCCc-c--c-ccCCCCCCCCCCCCCCccCccccCC
Q 039556 320 MTTA-YLLDNANST-I--T-DIRIGVSGTPLDFGSGHVNPNKAMD 359 (515)
Q Consensus 320 ~~tA-~~~~~~~~~-~--~-~~~~~~~~~~~~~GaG~vn~~~A~~ 359 (515)
...+ .++. .|.. . . ......+..+...|+|.+|..++++
T Consensus 498 ~~~~f~Dit-~G~n~~~~~~~~~~a~~GwD~~TGlGtpn~~~l~~ 541 (552)
T 1t1e_A 498 PPEVFHDIT-EGNNDIANRARIYQAGPGWDPCTGLGSPIGIRLLQ 541 (552)
T ss_dssp CGGGEECCC-SCBCCCSSSSCCSBCCSSCBTTTBTCEECHHHHHH
T ss_pred Cccceeecc-cCCCCCcCCCCCcCCCCCCCCCccccccCHHHHHH
Confidence 0001 1111 0100 0 0 0001234456678999999988765
No 39
>2qtw_A Proprotein convertase subtilisin/kexin type 9 Pro; coronary heart disease, hypercholest low density lipoprotein receptor, autocatalytic cleavage; HET: NAG; 1.90A {Homo sapiens} PDB: 3m0c_A 2pmw_A 3h42_A 3bps_P 3gcw_P 3gcx_P 3p5b_P 3p5c_P
Probab=98.72 E-value=8.3e-09 Score=90.59 Aligned_cols=44 Identities=18% Similarity=0.161 Sum_probs=41.6
Q ss_pred CCceEEEeccccceEEeecCHHHHHhhcCCCCeEEEEeCccccc
Q 039556 15 TPTHLYTYNHVVDGFSAVLSQTHLDQLQKLPGHHATYIETFGHL 58 (515)
Q Consensus 15 ~~~i~ysY~~~~~GFaA~lt~~~~~~L~~~p~V~~Ve~D~~~~l 58 (515)
...++|+|+++|+||+|+|+++++++|+++|+|.+||||+++++
T Consensus 80 g~~i~~~Y~~~~~GFaa~l~~~~~~~L~~~p~V~~VE~D~~v~a 123 (124)
T 2qtw_A 80 LTKILHVFHGLLPGFLVKMSGDLLELALKLPHVDYIEEDSSVFA 123 (124)
T ss_dssp CCEEEEEECSSSCEEEEECCGGGHHHHHTSTTEEEEEEEEEEEE
T ss_pred CCceEEEecccceEEEEEcCHHHHHHHHcCCCCcEEEeCceEec
Confidence 35899999999999999999999999999999999999999875
No 40
>3icu_A E3 ubiquitin-protein ligase RNF128; E3 ligase, energy, PA domain, transmembrane,protein turnover conjugation pathway; HET: NAG; 2.10A {Homo sapiens}
Probab=98.59 E-value=1.3e-07 Score=88.88 Aligned_cols=76 Identities=13% Similarity=0.106 Sum_probs=62.8
Q ss_pred cceEEEEeecCCC-cchhhhhHHHHHHhcCceeEEEcCC--Cccc----cCCCCccCeeecCchhhHHHHHHHhcCCCce
Q 039556 143 ERKYIFCAYDYDG-NVTVYQQFKEVQRIGAAGAVFSSDP--RQYL----SSSNFSMPLVTVNPKDWELVKKYIINTENAS 215 (515)
Q Consensus 143 ~GkIvlc~~~~g~-~~~~~k~~~~v~~aGa~gvi~~n~~--g~~~----~~~~~~~P~~~i~~~~g~~l~~~~~s~~~~~ 215 (515)
.|||+|+ +||. |.|.+| ..+|+++||+++||+|+. +... ......||+++|+.++|+.|++++..+...+
T Consensus 104 ~gkIaLV--~RG~~CsF~~K-v~nAq~aGA~avIIyNn~~~g~~~~~m~~~~~~~IPsv~Is~~~G~~L~~~L~~G~~Vt 180 (194)
T 3icu_A 104 VSWLALI--QRGGGCTFADK-IHLAYERGASGAVIFNFPGTRNEVIPMSHPGAVDIVAIMIGNLKGTKILQSIQRGIQVT 180 (194)
T ss_dssp CCEEEEE--ESCTTCCHHHH-HHHHHHTTCSEEEEECCTTCTTCCCCCCCTTCCSSEEEEECHHHHHHHHHHHHTTCCEE
T ss_pred CCeEEEE--ECCCCcCHHHH-HHHHHHCCCcEEEEEeCCCCCCceeeecCCCCCceeEEEECHHHHHHHHHHHHCCCeEE
Confidence 3799999 9999 999999 999999999999999972 2221 1123469999999999999999999987766
Q ss_pred EEEEec
Q 039556 216 VSIKFQ 221 (515)
Q Consensus 216 ~~i~~~ 221 (515)
.+|.++
T Consensus 181 vti~vg 186 (194)
T 3icu_A 181 MVIEVG 186 (194)
T ss_dssp EEEEEE
T ss_pred EEEECC
Confidence 666554
No 41
>1v5i_B POIA1, IA-1=serine proteinase inhibitor; protease-inhibitor complex, subtilisin, hydrolase-Pro binding complex; 1.50A {Pleurotus ostreatus} SCOP: d.58.3.2 PDB: 1itp_A
Probab=98.58 E-value=3.1e-08 Score=79.37 Aligned_cols=43 Identities=21% Similarity=0.209 Sum_probs=40.0
Q ss_pred CceEEEe-ccccceEEeecCHHHHHhhcCC--CCeEEEEeCccccc
Q 039556 16 PTHLYTY-NHVVDGFSAVLSQTHLDQLQKL--PGHHATYIETFGHL 58 (515)
Q Consensus 16 ~~i~ysY-~~~~~GFaA~lt~~~~~~L~~~--p~V~~Ve~D~~~~l 58 (515)
..+.|+| .++|+||+++|+++++++|+++ |.|.+||+|+++++
T Consensus 30 g~i~~~y~~~~~~Gfa~~~~~~~l~~l~~~~~p~V~~VE~D~~v~~ 75 (76)
T 1v5i_B 30 GTITNEYNMPGMKGFAGELTPQSLTKFQGLQGDLIDSIEEDHVAHA 75 (76)
T ss_dssp CCCCEEEEETTEEEEEEEECHHHHHHHHHTBTTTEEEEEECCEEEC
T ss_pred CceEEEEEcCceeEEEEEcCHHHHHHHHhcCCCCCcEEcCCcEEeC
Confidence 4799999 4899999999999999999999 89999999999875
No 42
>2z30_B TK-subtilisin; thermococcus kodakaraensis, hydrolase; 1.65A {Thermococcus kodakarensis} PDB: 2z2y_B 3a3p_B 2z56_B 2z58_B 2z57_B 3a3n_B 3a3o_B
Probab=97.64 E-value=4.5e-05 Score=58.94 Aligned_cols=44 Identities=14% Similarity=0.281 Sum_probs=40.1
Q ss_pred CCCceEEEeccccceEEeecCHHHHHhhcCCCCeEEEEeCccccc
Q 039556 14 DTPTHLYTYNHVVDGFSAVLSQTHLDQLQKLPGHHATYIETFGHL 58 (515)
Q Consensus 14 ~~~~i~ysY~~~~~GFaA~lt~~~~~~L~~~p~V~~Ve~D~~~~l 58 (515)
...+++|.|. .++++++.|+++.+++|+++|+|.+||+|..++.
T Consensus 21 ~gG~i~~~~~-~I~a~~~~lp~~~~~~L~~~p~V~yVE~D~~v~a 64 (65)
T 2z30_B 21 IGGHIVYQFK-LIPAVVVDVPANAVGKLKKMPGVEKVEFDHQAVL 64 (65)
T ss_dssp GTCEEEEECS-SSSEEEEEECGGGHHHHHTSTTEEEEEECCEEEE
T ss_pred CCCEEEEEec-CCcEEEEEeCHHHHHHHhcCCCceEEecCcEEEc
Confidence 3568999997 5999999999999999999999999999998854
No 43
>2ek8_A Aminopeptidase; metalloproteinase, hydrolase; 1.80A {Aneurinibacillus SP} PDB: 2ek9_A*
Probab=96.32 E-value=0.0089 Score=62.51 Aligned_cols=65 Identities=8% Similarity=0.071 Sum_probs=53.5
Q ss_pred ccceEEEEeecCCCcchhhhhHHHHHHhcCceeEEEcC-CCccc----cCCCCccCeeecCchhhHHHHHHHh
Q 039556 142 KERKYIFCAYDYDGNVTVYQQFKEVQRIGAAGAVFSSD-PRQYL----SSSNFSMPLVTVNPKDWELVKKYII 209 (515)
Q Consensus 142 ~~GkIvlc~~~~g~~~~~~k~~~~v~~aGa~gvi~~n~-~g~~~----~~~~~~~P~~~i~~~~g~~l~~~~~ 209 (515)
..||||++ ++|.|.+..| ..+++++||+|+|++++ .+... ......+|++.++.++++.|++.+.
T Consensus 113 v~GkIvlv--~~g~~~~~~k-~~~A~~~GA~gvIi~~~~~~~~~g~~~~~~~~~IP~~~Is~~~a~~L~~~l~ 182 (421)
T 2ek8_A 113 LNGKIALI--QRGNISFADK-VRNAAKQGAKAVIIYNNTDGKLNGTLGGSDASFVAAVGITKQEGDALAANLR 182 (421)
T ss_dssp CTTSEEEE--ECCSSCHHHH-HHHHHHTTCSEEEEECSSSSCCCCBCSSCCTTCCEEEEECHHHHHHHHHHHH
T ss_pred cCceEEEE--eCCCCCHHHH-HHHHHHCCCeEEEEEeCCCcccccccCCCCCCCccEEEeCHHHHHHHHHHhh
Confidence 44999999 9999999999 99999999999999987 32211 1124568999999999999999884
No 44
>2ys4_A Hydrocephalus-inducing protein homolog; hydin, PAPD-like, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=96.25 E-value=0.024 Score=48.74 Aligned_cols=74 Identities=11% Similarity=0.025 Sum_probs=55.0
Q ss_pred ceEEEEEEEEeccCCCeeeEEEEECCCCcEEEEecceEEEecCCcEEEEEEEEEecccccccCCCCCcceEEEEEEEeeC
Q 039556 418 ASFTFKWVLTNVDDTSSVNTAAVKAPAGMKVVVQPETATFDRKYSKAEFNLTLSIDLGITVSPKCNYLGNFGYLTWHENI 497 (515)
Q Consensus 418 ~~~t~~rtvtNvg~~~~tY~~~v~~p~g~~v~v~P~~l~~~~~g~~~~~~Vt~~~~~~~~~~~~~~~~~~~G~i~~~~~~ 497 (515)
...+.+.+|+|+|+.+..|+..... -.+|+|+.-++ ++||+..++|+|.+... +.+.+.|... .+
T Consensus 41 ~~~~~~~~l~N~g~~~~~f~~~~~~----~F~i~P~~g~L-~pg~~~~i~V~F~P~~~---------g~~~~~l~v~-~~ 105 (122)
T 2ys4_A 41 YSTQKILLVRNIGNKNAVFHIKTCR----PFSIEPAIGTL-NVGESMQLEVEFEPQSV---------GDHSGRLIVC-YD 105 (122)
T ss_dssp SCEEEEEEEECCSSSCEEEEEECCT----TEEEESSEEEE-CTTCEEEEEEEECCSSS---------BCCCCBCEEE-ES
T ss_pred CeEEEEEEEEECCCCCEEEEEecCC----CeEEECCcCEE-CCCCEEEEEEEEEcCCC---------ccEEEEEEEE-EC
Confidence 5677888999999998888876543 35678999999 79999999999998753 4566776663 34
Q ss_pred CeeEEEeEE
Q 039556 498 GKHMVRSPI 506 (515)
Q Consensus 498 ~~~~vr~P~ 506 (515)
++..+.+++
T Consensus 106 ~g~~~~v~L 114 (122)
T 2ys4_A 106 TGEKVFVSL 114 (122)
T ss_dssp SSCEECCEE
T ss_pred CCCEEEEEE
Confidence 445555444
No 45
>1y9z_A Alkaline serine protease; subtilisin-like alpha/beta domain, insert beta barrel domain hydrolase; HET: PMS; 1.40A {Pseudoalteromonas SP} PDB: 1v6c_A* 1wvm_A*
Probab=96.06 E-value=0.01 Score=62.45 Aligned_cols=35 Identities=23% Similarity=0.216 Sum_probs=29.5
Q ss_pred eecccCCCeeeecCCCCCCCCCCCCCCCceEeCCCcEEeeeCC
Q 039556 224 KLGTKRAPQVAYFSSRGPDSQPPWILKPDILAPGVDILAAWVP 266 (515)
Q Consensus 224 ~~~~~~~~~va~fSs~Gp~~~~~~~lKPdi~APG~~I~sa~~~ 266 (515)
+...+..+.++.||++||.+ ||+|||++|+++++.
T Consensus 177 VgA~~~~~~~~~~S~~g~~v--------dv~ApG~~i~s~~~~ 211 (441)
T 1y9z_A 177 VAAVDSNLDHAAFSQYTDQV--------EISGPGEAILSTVTV 211 (441)
T ss_dssp EEEECTTCCBCTTSCCCTTE--------EEEEECSSEEEECST
T ss_pred EEEECCCCCCCccccCCCce--------EEEeccCCeeccccC
Confidence 34456678899999999865 999999999999885
No 46
>3iib_A Peptidase M28; YP_926796.1, structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.70A {Shewanella amazonensis SB2B}
Probab=95.43 E-value=0.047 Score=57.51 Aligned_cols=78 Identities=17% Similarity=0.224 Sum_probs=54.9
Q ss_pred CccceEEEEeecCCCcc---------hhhhh---HHHHHHhcCceeEEEcC-CCcc--------c-cCCCCccCeeecCc
Q 039556 141 SKERKYIFCAYDYDGNV---------TVYQQ---FKEVQRIGAAGAVFSSD-PRQY--------L-SSSNFSMPLVTVNP 198 (515)
Q Consensus 141 ~~~GkIvlc~~~~g~~~---------~~~k~---~~~v~~aGa~gvi~~n~-~g~~--------~-~~~~~~~P~~~i~~ 198 (515)
...|||||+ +++.|. +..|. ..+|+++||+|+|++++ .+.. . ......+|++.|+.
T Consensus 126 dvkGKIVlv--~~~~~~~~~~~~y~~~~~kr~~~a~~A~~aGA~avIi~~~~~~~~~~~~tg~~~~~~~~~~IP~~~Is~ 203 (444)
T 3iib_A 126 SLNDKIAFI--DAKTERHRDGKGYGQTASGRSRGAVAAAEKGAVGIIIRSIGTDHDRMAHTGMMRYEEGVTAIPAAAISN 203 (444)
T ss_dssp TTTTCEEEE--CCCCCCCTTCHHHHHHHHHHHHHHHHHHHTTCSEEEEECSCSCCSSCCCCCBCCCCTTSCCCCEEEECH
T ss_pred ccCccEEEE--eCCCCCCcccccccchhhhhhhHHHHHHHCCCeEEEEEccCCcccccccCCccccCCCCCCCCeEEecH
Confidence 345999999 888774 33331 34688999999999986 2110 0 11235699999999
Q ss_pred hhhHHHHHHHhcCCCceEEEEe
Q 039556 199 KDWELVKKYIINTENASVSIKF 220 (515)
Q Consensus 199 ~~g~~l~~~~~s~~~~~~~i~~ 220 (515)
++++.|+..+..+....+.+..
T Consensus 204 ~da~~L~~~l~~g~~~~v~l~~ 225 (444)
T 3iib_A 204 PDADLINAMLKRDKEVVISLEL 225 (444)
T ss_dssp HHHHHHHHHHTTTCCCEEEEEE
T ss_pred HHHHHHHHHHhCCCCeEEEEEE
Confidence 9999999999876655455543
No 47
>3kas_A Transferrin receptor protein 1; transferrin receptor 1, arenavirus, cell MEMB disulfide bond, endocytosis, HOST-virus inter receptor, secreted, transmembrane; HET: NAG FUC BMA MAN; 2.40A {Homo sapiens} PDB: 1de4_C* 3s9l_A* 3s9m_A* 3s9n_A* 1cx8_A* 1suv_A 2nsu_A
Probab=95.30 E-value=0.025 Score=62.38 Aligned_cols=65 Identities=9% Similarity=0.065 Sum_probs=51.2
Q ss_pred ccceEEEEeecCCCcchhhhhHHHHHHhcCceeEEEcCC-Ccc-------------------ccC---------------
Q 039556 142 KERKYIFCAYDYDGNVTVYQQFKEVQRIGAAGAVFSSDP-RQY-------------------LSS--------------- 186 (515)
Q Consensus 142 ~~GkIvlc~~~~g~~~~~~k~~~~v~~aGa~gvi~~n~~-g~~-------------------~~~--------------- 186 (515)
..||||++ .+|.|.+..| ..+|+++||+|+|++++. +.. ..+
T Consensus 130 v~GkIvlv--~~g~~~~~~K-~~~A~~~GA~gvii~~~~~~~~~~~~~~~~~G~~~~~~Gdp~tpg~ps~~~~~~~~~~~ 206 (640)
T 3kas_A 130 VNGSIVIV--RAGKITFAEK-VANAESLNAIGVLIYMDQTKFPIVNAELSFFGHAHLGTGDPYTPGFPSFNHTQFPPSRS 206 (640)
T ss_dssp CTTSEEEE--ESCSSCHHHH-HHHHHTTTCSEEEEECCTTTCCCSCTTCCCCEECCSSSSCSCCCSSCC---CCCCCCSS
T ss_pred cCCcEEEE--ecCCCCHHHH-HHHHHHCCCeEEEEEeccccccccccccccccccccCCCCCCCCCcccccccccccccc
Confidence 34999999 9999999999 999999999999999872 110 000
Q ss_pred -CCCccCeeecCchhhHHHHHHHh
Q 039556 187 -SNFSMPLVTVNPKDWELVKKYII 209 (515)
Q Consensus 187 -~~~~~P~~~i~~~~g~~l~~~~~ 209 (515)
....+|++.|+.++++.|+..+.
T Consensus 207 ~~~p~IP~~~Is~~~a~~Ll~~l~ 230 (640)
T 3kas_A 207 SGLPNIPVQTISRAAAEKLFGNME 230 (640)
T ss_dssp CCCCSSCEEECCHHHHHHHHTTEE
T ss_pred cCCCCCCEEecCHHHHHHHHHHcc
Confidence 02358999999999999987653
No 48
>3fed_A Glutamate carboxypeptidase III; metallopeptidase, bimetallic active site, N-glycosylation, C cation, chloride anion, zinc IONS, dipept glycoprotein; HET: NAG BIX; 1.29A {Homo sapiens} PDB: 3fec_A* 3fee_A* 3ff3_A* 2c6c_A* 2c6g_A* 2c6p_A* 2cij_A* 2jbj_A* 2jbk_A* 3rbu_A* 3bi1_A* 2oot_A* 2pvv_A* 2pvw_A* 2xei_A* 2or4_A* 3bi0_A* 3bhx_A* 3d7d_A* 3d7f_A* ...
Probab=95.22 E-value=0.018 Score=64.16 Aligned_cols=66 Identities=21% Similarity=0.297 Sum_probs=52.5
Q ss_pred ccceEEEEeecCCCcchhhhhHHHHHHhcCceeEEEcCC------Cc---------------------------cccC--
Q 039556 142 KERKYIFCAYDYDGNVTVYQQFKEVQRIGAAGAVFSSDP------RQ---------------------------YLSS-- 186 (515)
Q Consensus 142 ~~GkIvlc~~~~g~~~~~~k~~~~v~~aGa~gvi~~n~~------g~---------------------------~~~~-- 186 (515)
..|||||+ ++|.|.+.+| ..+|+++||+|+|++++. |. ...+
T Consensus 153 v~GkIvlv--~~G~~~~~~K-v~~A~~~GA~gviiy~dp~d~~~~g~~~yP~~~~~p~~~vqrGsv~~~~~~GDp~TPG~ 229 (707)
T 3fed_A 153 CTGKIVIA--RYGKIFRGNK-VKNAMLAGAIGIILYSDPADYFAPEVQPYPKGWNLPGTAAQRGNVLNLNGAGDPLTPGY 229 (707)
T ss_dssp CTTCEEEE--ECCSSCHHHH-HHHHHHTTCSEEEEECCHHHHCCTTCCBTTTSSBCCTTCCCCCCCCCCTTCCSTTCTTS
T ss_pred CCCeEEEE--ECCCCCHhHH-HHHHHHCCCEEEEEEcCchhccccccccCCCCccCCCccccccceecccCCCCCCCCCC
Confidence 34999999 9999999999 999999999999999861 10 0000
Q ss_pred ---------------CCCccCeeecCchhhHHHHHHHhc
Q 039556 187 ---------------SNFSMPLVTVNPKDWELVKKYIIN 210 (515)
Q Consensus 187 ---------------~~~~~P~~~i~~~~g~~l~~~~~s 210 (515)
....||++.|+.++++.|+..+..
T Consensus 230 ps~~~~~r~~~~~~~~~p~IP~~pIS~~da~~Ll~~l~g 268 (707)
T 3fed_A 230 PAKEYTFRLDVEEGVGIPRIPVHPIGYNDAEILLRYLGG 268 (707)
T ss_dssp CCCTTCCCCCGGGCTTCCSSCEEEECHHHHHHHHHTBCB
T ss_pred cccCCCcccChhhccCCCCCCeEecCHHHHHHHHHHhcC
Confidence 024689999999999999987754
No 49
>3edy_A Tripeptidyl-peptidase 1; protease, TPP1, sedolisin, batten disease, lincl, zymogen, P exopeptidase, endopeptidase, S53 family, CLN2; HET: NAG; 1.85A {Homo sapiens} PDB: 3ee6_A*
Probab=95.18 E-value=0.011 Score=63.99 Aligned_cols=46 Identities=26% Similarity=0.225 Sum_probs=36.2
Q ss_pred CCCCCceEeCCCcEEeeeCCCCCCCCCCCCCccccceEEecCcccchhHHHHHHHHHHhh
Q 039556 247 WILKPDILAPGVDILAAWVPNRPVKPIRKSDYLFSDYALMSGTSISCPHVAGIAALLKAM 306 (515)
Q Consensus 247 ~~lKPdi~APG~~I~sa~~~~~~~~~~~~~~~~~~~~~~~SGTSmAaPhVAG~aALl~~~ 306 (515)
++-.|||+|.|.+++-...+ ..+..+.|||+|||++||+.||+.++
T Consensus 427 gR~~PDVaa~~~~~~v~~~g--------------~~~~~~gGTS~aaP~~A~~~al~n~~ 472 (544)
T 3edy_A 427 GRAYPDVAALSDGYWVVSNR--------------VPIPWVSGTSASTPVFGGILSLINEH 472 (544)
T ss_dssp EEEECSEEEECSSEEEEETT--------------EEEEEECSHHHHHHHHHHHHHHHHHH
T ss_pred CCcCCCeecccCCEEEEECC--------------eeeeeecCcccchhHHHHHHHHHHHH
Confidence 56789999999987644322 22345899999999999999999886
No 50
>3qbt_B Inositol polyphosphate 5-phosphatase OCRL-1; protein transport, vesicular trafficking, GTPase, LOWE syndr immunoglobulin fold, RAB8A, endocytosis; HET: GNP; 2.00A {Homo sapiens}
Probab=90.09 E-value=2.1 Score=37.50 Aligned_cols=91 Identities=9% Similarity=-0.031 Sum_probs=63.3
Q ss_pred ceEEEEEEEEeccCCCeeeEEEEECC----CCcEEEEecceEEEecCCcEEEEEEEEEecccc--cccCCCCCcceEEEE
Q 039556 418 ASFTFKWVLTNVDDTSSVNTAAVKAP----AGMKVVVQPETATFDRKYSKAEFNLTLSIDLGI--TVSPKCNYLGNFGYL 491 (515)
Q Consensus 418 ~~~t~~rtvtNvg~~~~tY~~~v~~p----~g~~v~v~P~~l~~~~~g~~~~~~Vt~~~~~~~--~~~~~~~~~~~~G~i 491 (515)
...+-+.+++|.|.-+.+|++..... ..--++|+|..-++ .||++..++|++.+.+.. .|... . ...+--|
T Consensus 43 ~~~~~~l~I~Ntg~vpa~F~f~~~~~~~~~~~~wl~v~P~~G~L-~Pge~~~I~v~~~v~~~~~~~ln~g-~-~~l~diL 119 (140)
T 3qbt_B 43 QLQKEKFQISNNGQVPCHFSFIPKLNDSQYCKPWLRAEPFEGYL-EPNETVDISLDVYVSKDSVTILNSG-E-DKIEDIL 119 (140)
T ss_dssp CCEEEEEEEEECSSSCEEEEEECCTTCSSSSCTTEEEESCEEEE-CTTCEEEEEEEECBCHHHHHHHHHS-S-SCSCEEE
T ss_pred eeeeeEEEEEcCCccceEEEEecCCCchhhhhHhhhcCCccccc-CCCCeeEEEEEEEEccCcccccccc-h-hhhheeE
Confidence 34566778999999999999974321 11236678999999 899999999999875310 01111 1 3456778
Q ss_pred EEEeeCCeeEEEeEEEEEEee
Q 039556 492 TWHENIGKHMVRSPIVSAFAN 512 (515)
Q Consensus 492 ~~~~~~~~~~vr~P~~v~~~~ 512 (515)
+++ ..++....+|+...+..
T Consensus 120 vL~-Ve~G~d~fI~v~g~~~p 139 (140)
T 3qbt_B 120 VLH-LDRGKDYFLTISGNYLP 139 (140)
T ss_dssp EEE-ETTSCEEEEEEEEEECC
T ss_pred EEE-eecCCcEEEEEeccccC
Confidence 884 46778889999877654
No 51
>2e6j_A Hydin protein; PAPD, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=89.70 E-value=1.6 Score=36.04 Aligned_cols=56 Identities=11% Similarity=0.180 Sum_probs=43.3
Q ss_pred ceEEEEEEEEeccCCCeeeEEEEEC-CCCcEEEEecceEEEecCCcEEEEEEEEEecc
Q 039556 418 ASFTFKWVLTNVDDTSSVNTAAVKA-PAGMKVVVQPETATFDRKYSKAEFNLTLSIDL 474 (515)
Q Consensus 418 ~~~t~~rtvtNvg~~~~tY~~~v~~-p~g~~v~v~P~~l~~~~~g~~~~~~Vt~~~~~ 474 (515)
...+.+.+++|.|+.+..|+..... +.+...+++|..=.+ .+|+++.++|+|.+..
T Consensus 26 ~~~~~~~~l~N~g~~p~~~~~~~~~~~~~~~f~v~p~~g~i-~pg~~~~i~V~f~~~~ 82 (112)
T 2e6j_A 26 SAHCYEAILYNKGSIDALFNMTPPTSALGACFVFSPKEGII-EPSGVQAIQISFSSII 82 (112)
T ss_dssp CCEEEEEEEEECCSSCEEEEECCCSSHHHHHCEEESSEEEE-CTTBCCEEEEEECCCC
T ss_pred CEEEEEEEEEECCcceEEEEEecCCccccCcEEEECCcCEE-CCCCEEEEEEEEECCC
Confidence 3566778899999999999983211 112346779999999 7999999999999864
No 52
>2r39_A FIXG-related protein; structural GE PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, iron, iron-sulfur; 2.02A {Vibrio parahaemolyticus}
Probab=85.96 E-value=4.1 Score=34.39 Aligned_cols=54 Identities=13% Similarity=0.073 Sum_probs=45.0
Q ss_pred eEEEEEEEEeccCCCeeeEEEEECCCCcEEEEecceEEEecCCcEEEEEEEEEecc
Q 039556 419 SFTFKWVLTNVDDTSSVNTAAVKAPAGMKVVVQPETATFDRKYSKAEFNLTLSIDL 474 (515)
Q Consensus 419 ~~t~~rtvtNvg~~~~tY~~~v~~p~g~~v~v~P~~l~~~~~g~~~~~~Vt~~~~~ 474 (515)
.-..+..+.|....+.+|+++++..+++++. .|..+.+ ++||..++.|.+..+.
T Consensus 32 ~N~Ytlki~Nkt~~~~~~~l~v~g~~~l~~~-g~~~i~v-~~g~~~~~~v~v~~~~ 85 (118)
T 2r39_A 32 ENTYTLKVINKTQQVQEYNLDVKGLNDVSWY-GKQTIQV-EPGEVLNLPMSLGADP 85 (118)
T ss_dssp EEEEEEEEEECSSSCEEEEEEEESCSSCEEE-SCCEEEE-CTTCEEEEEEEEEECG
T ss_pred EEEEEEEEEECCCCCEEEEEEEeCCcccEEe-CCCcEEE-CCCCEEEEEEEEEECh
Confidence 3467778999999999999999987776653 4666888 7999999999999875
No 53
>3qis_A Inositol polyphosphate 5-phosphatase OCRL-1; DENT disease, RAC1, RAB gtpases, APPL1, endocytic PATH golgi complex, hydrolase-protein binding complex; 2.30A {Homo sapiens} PDB: 2qv2_A
Probab=82.55 E-value=11 Score=38.30 Aligned_cols=91 Identities=10% Similarity=-0.015 Sum_probs=60.9
Q ss_pred ceEEEEEEEEeccCCCeeeEEEEECCCCcE----EEEecceEEEecCCcEEEEEEEEEecccc-c-ccCCCCCcceEEEE
Q 039556 418 ASFTFKWVLTNVDDTSSVNTAAVKAPAGMK----VVVQPETATFDRKYSKAEFNLTLSIDLGI-T-VSPKCNYLGNFGYL 491 (515)
Q Consensus 418 ~~~t~~rtvtNvg~~~~tY~~~v~~p~g~~----v~v~P~~l~~~~~g~~~~~~Vt~~~~~~~-~-~~~~~~~~~~~G~i 491 (515)
...+-+.||+|+|.-+.+|++.-....... ++|+|..-++ .+|++..++|++.+.... . +.. +....+--|
T Consensus 46 ~~~~~~l~i~N~g~~pa~f~f~~~~~~~~~~~~wl~v~p~~g~l-~Pge~~~i~l~~~v~~~~~~~ln~--g~~~l~diL 122 (366)
T 3qis_A 46 QLQKEKFQISNNGQVPCHFSFIPKLNDSQYCKPWLRAEPFEGYL-EPNETVDISLDVYVSKDSVTILNS--GEDKIEDIL 122 (366)
T ss_dssp CCEEEEEEEEECSSSCEEEEEECCTTCSSSSCTTEEEESCEEEE-CTTCEEEEEEEECBCTTTHHHHHH--TSSCSCEEE
T ss_pred CeEEEEEEEEecCCceEEEEEEeCCCCCCCCCCcEEEeCCccEE-CCCCEEEEEEEEEECHHHHHHHhc--CccccceEE
Confidence 356667789999999999999544322222 7788999999 899999999999876510 0 100 113345667
Q ss_pred EEEeeCCeeEEEeEEEEEEee
Q 039556 492 TWHENIGKHMVRSPIVSAFAN 512 (515)
Q Consensus 492 ~~~~~~~~~~vr~P~~v~~~~ 512 (515)
++. ..+++..-+|+-..+..
T Consensus 123 vL~-ve~G~d~FI~v~~~~~~ 142 (366)
T 3qis_A 123 VLH-LDRGKDYFLTISGNYLP 142 (366)
T ss_dssp EEE-ETTSCEEEEEEEEEECC
T ss_pred EEE-EeCCCcEEEEeccccCC
Confidence 773 45566677777766543
No 54
>2qsv_A Uncharacterized protein; MCSG, structural genomics, porphyromonas gingivalis W83, PSI protein structure initiative; 2.10A {Porphyromonas gingivalis}
Probab=80.66 E-value=8.9 Score=35.85 Aligned_cols=82 Identities=13% Similarity=0.065 Sum_probs=54.0
Q ss_pred ceEEEEEEEEeccCCCeeeEEEEECCCCcEEEEecceEEEecCCcEEEEEEEEEecccccccCCCCCcceEEEEEEEeeC
Q 039556 418 ASFTFKWVLTNVDDTSSVNTAAVKAPAGMKVVVQPETATFDRKYSKAEFNLTLSIDLGITVSPKCNYLGNFGYLTWHENI 497 (515)
Q Consensus 418 ~~~t~~rtvtNvg~~~~tY~~~v~~p~g~~v~v~P~~l~~~~~g~~~~~~Vt~~~~~~~~~~~~~~~~~~~G~i~~~~~~ 497 (515)
...+.+.+++|.|+.+.+++... .|..+++...| -.+ ++|++..++|++..... .. . +...++|+....+
T Consensus 19 ~~~~~~~~i~N~g~~pl~i~~~~-~p~~~~~~~~~--~~I-~PG~~g~I~vt~~~~~~----~~-~-G~~~~~i~v~~~~ 88 (220)
T 2qsv_A 19 DEGVVRLVVNNTDESDLQVAVVS-LPSFVSLDDRA--FRL-QAREPRELNLSLAVPRN----MP-P-GMKDEPLVLEVTS 88 (220)
T ss_dssp CCCEEEEEEEECSSSCEEEEEEE-CCTTEECSCCE--EEE-CSSSCEEEEEEECCCTT----CC-S-EEEEEEEEEEEEC
T ss_pred CcceEEEEEEeCCCCceEEEecc-CCCceEeeeCc--cee-CCCCceEEEEEEcchhc----cc-C-CceeeEEEEEEEc
Confidence 34566888999999988888753 36666654444 456 79999999999987652 11 1 4566778874323
Q ss_pred ---Ce-eEEEeEEEEE
Q 039556 498 ---GK-HMVRSPIVSA 509 (515)
Q Consensus 498 ---~~-~~vr~P~~v~ 509 (515)
+. ...++|+...
T Consensus 89 ~~~~~~~~~~i~v~g~ 104 (220)
T 2qsv_A 89 PETGKKAVDSVMVSLP 104 (220)
T ss_dssp TTTCCEEEEEEEEEEE
T ss_pred CCCCcccccEEEEEEE
Confidence 22 3446666543
No 55
>3idu_A Uncharacterized protein; all beta-protein, structural genomics, PSI-2, protein structure initiative; 1.70A {Pyrococcus furiosus} PDB: 2kl6_A
Probab=66.20 E-value=27 Score=29.93 Aligned_cols=51 Identities=8% Similarity=0.034 Sum_probs=37.2
Q ss_pred ceEEEEEEEEeccCCC-eeeEEEEECCCCcEEEEecceEEEecCCcEEEEEEEEEe
Q 039556 418 ASFTFKWVLTNVDDTS-SVNTAAVKAPAGMKVVVQPETATFDRKYSKAEFNLTLSI 472 (515)
Q Consensus 418 ~~~t~~rtvtNvg~~~-~tY~~~v~~p~g~~v~v~P~~l~~~~~g~~~~~~Vt~~~ 472 (515)
...+++.||+|.|... ..|++.+.. .|-.+.-. ...+ ++|++++|+++.++
T Consensus 33 ~~~ti~vtV~N~G~~~a~~~~V~lyv-ng~~v~t~--~v~L-a~G~s~tv~f~~~~ 84 (127)
T 3idu_A 33 KLAEYEVHVKNLGGIGVPSTKVRVYI-NGTLYKNW--TVSL-GPKEEKVLTFNWTP 84 (127)
T ss_dssp CCEEEEEEEEECSSSCEEEEEEEEEE-TTEEEEEE--EEEE-CTTCEEEEEEEECC
T ss_pred CEEEEEEEEEECCCCccCCcEEEEEE-CCEEEeeE--Eecc-CCCCeEEEEEEEEc
Confidence 5789999999999855 678887765 45444322 3467 79999988887764
No 56
>2qsv_A Uncharacterized protein; MCSG, structural genomics, porphyromonas gingivalis W83, PSI protein structure initiative; 2.10A {Porphyromonas gingivalis}
Probab=65.35 E-value=58 Score=30.13 Aligned_cols=54 Identities=7% Similarity=0.057 Sum_probs=37.3
Q ss_pred ceEEEEEEEEeccCCCeeeEEEEECCCCcEEEEecceEEEecCCcEEEEEEEEEecc
Q 039556 418 ASFTFKWVLTNVDDTSSVNTAAVKAPAGMKVVVQPETATFDRKYSKAEFNLTLSIDL 474 (515)
Q Consensus 418 ~~~t~~rtvtNvg~~~~tY~~~v~~p~g~~v~v~P~~l~~~~~g~~~~~~Vt~~~~~ 474 (515)
...+.+.+++|+|+.+...+ .+....|-. ++++..-.+ ++||+..++|++.+..
T Consensus 134 ~~~~~~f~i~N~G~~pL~I~-~v~~scgct-~~~~~~~~i-~PGe~~~i~v~~~~~~ 187 (220)
T 2qsv_A 134 ETTKAAIEIRNVGAGPLRLH-SVTTRNPAL-TAVPDRTEI-KPGGSTLLRIAVDPQV 187 (220)
T ss_dssp SCEEEEEEEEECSSSCEEEE-EEEECSTTE-EEEESCSEE-CTTCEEEEEEEECHHH
T ss_pred CeEEEEEEEEECCCCCEEEE-EEEeCCCCE-eeecCCccC-CCCCEEEEEEEEecCC
Confidence 46778899999999876653 233333332 234444567 7999999999998754
No 57
>3zyz_A Beta-D-glucoside glucohydrolase; HET: NAG BGC; 2.10A {Hypocrea jecorina} PDB: 3zz1_A* 4i8d_A*
Probab=63.22 E-value=30 Score=38.33 Aligned_cols=55 Identities=7% Similarity=-0.004 Sum_probs=36.3
Q ss_pred ceEEEEEEEEeccCCC--eeeEEEEECCCC------cEEEEecceEEEecCCcEEEEEEEEEecc
Q 039556 418 ASFTFKWVLTNVDDTS--SVNTAAVKAPAG------MKVVVQPETATFDRKYSKAEFNLTLSIDL 474 (515)
Q Consensus 418 ~~~t~~rtvtNvg~~~--~tY~~~v~~p~g------~~v~v~P~~l~~~~~g~~~~~~Vt~~~~~ 474 (515)
...+++.+|||+|+.. ++=.+-+..|.+ -.+.- -+++.+ ++||+++++++++...
T Consensus 613 ~~~~vsv~VtNtG~~~G~EVvQlYv~~~~~~~~~P~k~L~g-F~kv~L-~pGes~~V~~~l~~~~ 675 (713)
T 3zyz_A 613 NVATVTVDIANSGQVTGAEVAQLYITYPSSAPRTPPKQLRG-FAKLNL-TPGQSGTATFNIRRRD 675 (713)
T ss_dssp EEEEEEEEEEECSSSCEEEEEEEEEECCTTSSSCCSCEEEE-EEEEEE-CTTCEEEEEEEEEGGG
T ss_pred CeEEEEEEEEeCCCCccceeeeeeeecCCCCCCchhHHhhh-ccccee-CCCCeEEEEEEEcHHH
Confidence 3578999999999854 344444555432 12332 233456 7999999999998654
No 58
>2x41_A Beta-glucosidase; hydrolase, TIM barrel fold, fibronectin type III fold; HET: BGC; 2.05A {Thermotoga neapolitana} PDB: 2x40_A* 2x42_A*
Probab=56.91 E-value=29 Score=38.47 Aligned_cols=71 Identities=17% Similarity=0.264 Sum_probs=43.9
Q ss_pred CCCCCcEEEEecCC--CCceEEEEEEEEeccCCC--eeeEEEEECCCC------cEEEEecceE-EEecCCcEEEEEEEE
Q 039556 402 DLNYPSFMIILNNT--KSASFTFKWVLTNVDDTS--SVNTAAVKAPAG------MKVVVQPETA-TFDRKYSKAEFNLTL 470 (515)
Q Consensus 402 ~lN~PSi~~~~~~~--~~~~~t~~rtvtNvg~~~--~tY~~~v~~p~g------~~v~v~P~~l-~~~~~g~~~~~~Vt~ 470 (515)
-|.|-.|..+...- .....+++.+|||+|+.. ++=.+-+..|.+ -.+.- -+++ .+ ++||++++++++
T Consensus 597 GLSYTtF~ys~~~~~~~~~~~~v~v~VtNtG~~~G~eVvQlYv~~~~~~~~~P~k~L~g-F~kv~~L-~pGes~~V~~~l 674 (721)
T 2x41_A 597 GLSYTTFEYSDLNVSFDGETLRVQYRIENTGGRAGKEVSQVYIKAPKGKIDKPFQELKA-FHKTRLL-NPGESEEVVLEI 674 (721)
T ss_dssp CBCSSCEEEEEEEEEECSSEEEEEEEEEECSSSCBCCEEEEEEECCCSSSCCCSCEEEE-EEECCCB-CTTCEEEEEEEE
T ss_pred CCCcceeEeeceEeecCCCeEEEEEEEEECCCCCCcEEeeEEEccCCCCCCCchHHhhc-ccccccC-CCCCeEEEEEEE
Confidence 56676666554210 125689999999999844 444444555432 12222 2334 45 799999999999
Q ss_pred Eecc
Q 039556 471 SIDL 474 (515)
Q Consensus 471 ~~~~ 474 (515)
+...
T Consensus 675 ~~~~ 678 (721)
T 2x41_A 675 PVRD 678 (721)
T ss_dssp EGGG
T ss_pred CHHH
Confidence 8754
No 59
>1w8o_A Bacterial sialidase; 3D-structure, glycosidase, hydrolase, beta- propeller; HET: LBT CIT; 1.70A {Micromonospora viridifaciens} SCOP: b.1.18.2 b.18.1.1 b.68.1.1 PDB: 1w8n_A* 1eut_A 1euu_A* 1wcq_A* 2bzd_A* 2ber_A* 1eur_A 1eus_A*
Probab=56.63 E-value=79 Score=33.54 Aligned_cols=64 Identities=13% Similarity=0.115 Sum_probs=45.6
Q ss_pred CCCcEEEEecCCCCceEEEEEEEEeccCCCeee-EEEEECCCCcEEEEecceEEEecCCcEEEEEEEEEecc
Q 039556 404 NYPSFMIILNNTKSASFTFKWVLTNVDDTSSVN-TAAVKAPAGMKVVVQPETATFDRKYSKAEFNLTLSIDL 474 (515)
Q Consensus 404 N~PSi~~~~~~~~~~~~t~~rtvtNvg~~~~tY-~~~v~~p~g~~v~v~P~~l~~~~~g~~~~~~Vt~~~~~ 474 (515)
..|.+.+... .+.+++.+|+|-+.....- ++++..|.+.+++. ....+ ++|++.+++++|+.+.
T Consensus 363 ~~~~~~~~~g----~~~~~~~~vtn~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-~~g~~~t~~~~vt~~~ 427 (601)
T 1w8o_A 363 TIPDVALEPG----QQVTVPVAVTNQSGIAVPKPSLQLDASPDWQVQG--SVEPL-MPGRQAKGQVTITVPA 427 (601)
T ss_dssp ECCCEEECTT----CEEEEEEEEECCSSSCBSSCEEEEECCTTSEEEE--EECCB-CTTCEEEEEEEEECCT
T ss_pred cCccceecCC----ceeEEEEEEECCCceeccCceEEEecCCCcEEec--ccccc-CCCCceEEEEEEecCC
Confidence 3466665432 5789999999976543322 44567788998876 34556 6899999999998875
No 60
>2kq1_A BH0266 protein; solution NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; NMR {Bacillus halodurans}
Probab=49.90 E-value=3.9 Score=34.65 Aligned_cols=54 Identities=17% Similarity=0.237 Sum_probs=34.1
Q ss_pred EEEEEEEEeccCCCeeeEEEEE-CCCCcEEEEecceEEEe-cCCcEEEEEEEEEec
Q 039556 420 FTFKWVLTNVDDTSSVNTAAVK-APAGMKVVVQPETATFD-RKYSKAEFNLTLSID 473 (515)
Q Consensus 420 ~t~~rtvtNvg~~~~tY~~~v~-~p~g~~v~v~P~~l~~~-~~g~~~~~~Vt~~~~ 473 (515)
..+..-++|.+.+..+..+.++ .|.|+++++.|+.++++ ...++++|.|++...
T Consensus 55 i~~~vDLs~l~~G~~~vpv~v~~lp~~v~v~v~P~~V~V~i~~~~~k~~pV~v~~~ 110 (119)
T 2kq1_A 55 YEVFVDLTEAGEGSHTVDVEHRGFPGDLAVTVEPRMARVQLEERQTVSVPVTVEMI 110 (119)
T ss_dssp CEEEEECTTCCBEEEEEECEEESSCTTSEEEESCCEEEEEEESCCCCCCCCCCCCC
T ss_pred EEEEEECccCCCCeEEEEEEEecCCCCeEEEEcCCEEEEEEEEEEEEEEEEEEEEC
Confidence 3444445565544334444555 68899999999987765 345566777666554
No 61
>1z9l_A Vesicle-associated membrane protein-associated protein A; VAP-A, cytoplasmic domain, protein binding; HET: MSE; 1.70A {Rattus norvegicus} PDB: 1z9o_A 2rr3_A 3ikk_A
Probab=48.43 E-value=68 Score=26.99 Aligned_cols=53 Identities=19% Similarity=0.132 Sum_probs=43.6
Q ss_pred ceEEEEEEEEeccCCCeeeEEEEECCCCcEEEEecceEEEecCCcEEEEEEEEEec
Q 039556 418 ASFTFKWVLTNVDDTSSVNTAAVKAPAGMKVVVQPETATFDRKYSKAEFNLTLSID 473 (515)
Q Consensus 418 ~~~t~~rtvtNvg~~~~tY~~~v~~p~g~~v~v~P~~l~~~~~g~~~~~~Vt~~~~ 473 (515)
...+-..+++|.++...-|++.-..|.... |.|..=.+ .+|++..+.|++.+.
T Consensus 27 ~~~~~~l~L~N~s~~~vaFKVKTT~p~~y~--VrP~~G~i-~P~~s~~v~V~~~~~ 79 (128)
T 1z9l_A 27 DVVTTNLKLQNPSDRKVCFKVKTTAPRRYC--VRPNSGVI-DPGSIVTVSVMLQPF 79 (128)
T ss_dssp SCEEEEEEEECCSSSCEEEEEEESCGGGEE--EESCEEEE-CTTCEEEEEEEECCC
T ss_pred ceEEEEEEEECCCCCeEEEEEECCCCCceE--EeCCCcEE-CCCCeEEEEEEECcC
Confidence 356777889999999999999988886655 57887777 799999999998764
No 62
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=48.40 E-value=1.1e+02 Score=25.79 Aligned_cols=54 Identities=11% Similarity=0.030 Sum_probs=37.2
Q ss_pred ceEEEEEEEEeccCCCe--------eeEEEEECCCCcEEE---------EecceEEEecCCcEEEEEEEEEe
Q 039556 418 ASFTFKWVLTNVDDTSS--------VNTAAVKAPAGMKVV---------VQPETATFDRKYSKAEFNLTLSI 472 (515)
Q Consensus 418 ~~~t~~rtvtNvg~~~~--------tY~~~v~~p~g~~v~---------v~P~~l~~~~~g~~~~~~Vt~~~ 472 (515)
....++.+|+|.++... .|.+.+....|-.|. ---...+| ++||+++|+.++..
T Consensus 18 ~~v~~~ltv~N~s~~~v~l~f~Sgq~~Df~v~d~~G~~VwrwS~~~~FtQa~~~~tl-~pGE~~~f~~~w~~ 88 (120)
T 3isy_A 18 EQIKFNMSLKNQSERAIEFQFSTGQKFELVVYDSEHKERYRYSKEKMFTQAFQNLTL-ESGETYDFSDVWKE 88 (120)
T ss_dssp SCEEEEEEEEECSSSCEEEEESSSCCEEEEEECTTCCEEEETTTTCCCCCCCEEEEE-CTTCEEEEEEEESS
T ss_pred CeEEEEEEEEcCCCCcEEEEeCCCCEEEEEEECCCCCEEEEccccchhhhhhceEEE-CCCCEEEEEEEeCC
Confidence 57889999999997654 355555555554443 11234567 79999999999883
No 63
>1wic_A Hypothetical protein riken cDNA 6030424E15; beta sandwich fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.1.11.2
Probab=48.07 E-value=49 Score=29.05 Aligned_cols=52 Identities=17% Similarity=0.144 Sum_probs=43.3
Q ss_pred eEEEEEEEEeccCCCeeeEEEEECCCCcEEEEecceEEEecCCcEEEEEEEEEec
Q 039556 419 SFTFKWVLTNVDDTSSVNTAAVKAPAGMKVVVQPETATFDRKYSKAEFNLTLSID 473 (515)
Q Consensus 419 ~~t~~rtvtNvg~~~~tY~~~v~~p~g~~v~v~P~~l~~~~~g~~~~~~Vt~~~~ 473 (515)
.++-..+++|..+...-|++.-..|.-.. |.|..=.+ .+|++..+.|++...
T Consensus 36 ~~~~~l~L~N~s~~~VaFKVKTT~p~~y~--VrP~~GiI-~P~~s~~V~V~lq~~ 87 (152)
T 1wic_A 36 EKKTLIVLTNVTKNIVAFKVRTTAPEKYR--VKPSNSSC-DPGASIDIIVSPHGG 87 (152)
T ss_dssp CCCEEEEEEBCSSSCEEEEEEESCTTTEE--EESSEEEE-CTTCEEEEEEEECSS
T ss_pred eEEEEEEEEcCCCCeEEEEEECCCCCcee--ecCCCcEE-CCCCeEEEEEEecCc
Confidence 44567889999999999999988887665 56988777 799999999999764
No 64
>1m1s_A WR4; structural genomics, major sperm protein, bioinformatics, PSI, protein structure initiative; 1.80A {Caenorhabditis elegans} SCOP: b.1.11.2
Probab=47.73 E-value=67 Score=27.01 Aligned_cols=50 Identities=10% Similarity=0.070 Sum_probs=40.9
Q ss_pred EEEEEEEeccCCCeeeEEEEECCCCcEEEEecceEEEecCCcEEEEEEEEEec
Q 039556 421 TFKWVLTNVDDTSSVNTAAVKAPAGMKVVVQPETATFDRKYSKAEFNLTLSID 473 (515)
Q Consensus 421 t~~rtvtNvg~~~~tY~~~v~~p~g~~v~v~P~~l~~~~~g~~~~~~Vt~~~~ 473 (515)
+.+.+++|..+....|++.-..|.-.. |.|..=.+ .+|++.++.|+..+.
T Consensus 26 ~~~l~L~N~t~~~vAFKVKtT~p~~Yr--VrP~~G~I-~Pg~~~~I~I~~q~~ 75 (116)
T 1m1s_A 26 NSTHNITSESDSRLAFKVKSSNNEHYR--VRPVYGFV-DAKGKSKLDINRLPG 75 (116)
T ss_dssp EEEEEEEECSSSEEEEEEEESCTTTEE--EECSEEEE-CTTCEEEEEEEECSC
T ss_pred EEEEEEECCCCCeEEEEEEecCCCceE--EcCCceEE-CCCCeEEEEEEeCCC
Confidence 567788999999999999888887666 56887666 799999999988764
No 65
>3abz_A Beta-glucosidase I; glycoside hydrolase family3 beta-glucosidase, PA14 domain, H; 2.15A {Kluyveromyces marxianus} PDB: 3ac0_A*
Probab=47.50 E-value=51 Score=37.30 Aligned_cols=71 Identities=15% Similarity=0.120 Sum_probs=43.5
Q ss_pred CCCCCCcEEEE--ecCCCCceEEEEEEEEecc-CCC--eeeEEEEECCCC------cEEEEecceEEEecCCcEEEEEEE
Q 039556 401 LDLNYPSFMII--LNNTKSASFTFKWVLTNVD-DTS--SVNTAAVKAPAG------MKVVVQPETATFDRKYSKAEFNLT 469 (515)
Q Consensus 401 ~~lN~PSi~~~--~~~~~~~~~t~~rtvtNvg-~~~--~tY~~~v~~p~g------~~v~v~P~~l~~~~~g~~~~~~Vt 469 (515)
.-|.|-+|..+ ...-.....+++.+|||+| +.. ++=.+-+..|.+ -.+.- -+++.+ ++||+++++++
T Consensus 716 ~GLSYTtF~ys~~~l~v~~~~~~v~v~V~NtG~~~~G~eVvQlYv~~~~~~~~~P~k~L~g-F~kv~L-~pGes~~V~~~ 793 (845)
T 3abz_A 716 YGLSYTTFELDISDFKVTDDKIAISVDVKNTGDKFAGSEVVQVYFSALNSKVSRPVKELKG-FEKVHL-EPGEKKTVNID 793 (845)
T ss_dssp CCBCSSCEEEEEEEEEECSSEEEEEEEEEECCSSCCEEEEEEEEEEESSCSSCCCSCEEEE-EEEEEE-CTTCEEEEEEE
T ss_pred CCCcceeEEEecccccccCCeEEEEEEEEECCcCCCcceeeeeeEeCCCCCcchhhheecc-ceeEEE-CCCCEEEEEEE
Confidence 35777777766 4311124689999999999 644 333333333321 22332 233456 79999999999
Q ss_pred EE-ec
Q 039556 470 LS-ID 473 (515)
Q Consensus 470 ~~-~~ 473 (515)
++ ..
T Consensus 794 l~~~~ 798 (845)
T 3abz_A 794 LELKD 798 (845)
T ss_dssp EEHHH
T ss_pred eCChH
Confidence 98 44
No 66
>1row_A SSP-19, MSP-domain protein like family member; beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Caenorhabditis elegans} SCOP: b.1.11.2
Probab=47.34 E-value=76 Score=26.23 Aligned_cols=50 Identities=10% Similarity=0.029 Sum_probs=40.9
Q ss_pred EEEEEEEeccCCCeeeEEEEECCCCcEEEEecceEEEecCCcEEEEEEEEEec
Q 039556 421 TFKWVLTNVDDTSSVNTAAVKAPAGMKVVVQPETATFDRKYSKAEFNLTLSID 473 (515)
Q Consensus 421 t~~rtvtNvg~~~~tY~~~v~~p~g~~v~v~P~~l~~~~~g~~~~~~Vt~~~~ 473 (515)
+.+.+++|..+....|++.-..|.-.. |.|..=.+ .+|++.++.|+..+.
T Consensus 18 ~~~l~L~N~t~~~vaFKVKtT~p~~y~--VrP~~G~I-~P~~~~~i~I~~q~~ 67 (109)
T 1row_A 18 SSTHKLVNGGAEKIVFKIKSSNNNEYR--IAPVFGFV-DPSGSKDVVITRTAG 67 (109)
T ss_dssp EEEEEEEECSSSCEEEEEEESCSSSEE--EECSEEEE-CTTEEEEEEEEECSC
T ss_pred eEEEEEEcCCCCeEEEEEEeCCCCceE--EcCCceEE-CCCCeEEEEEEeCCC
Confidence 456788999999999999988887766 56887666 799999999888764
No 67
>1msp_A MSP, major sperm protein; cytoskeletal protein, cell motility protein; 2.50A {Ascaris suum} SCOP: b.1.11.2 PDB: 3msp_A 2bvu_A 2msp_A 1grw_A
Probab=43.65 E-value=76 Score=26.78 Aligned_cols=52 Identities=12% Similarity=0.084 Sum_probs=42.9
Q ss_pred eEEEEEEEEeccCCCeeeEEEEECCCCcEEEEecceEEEecCCcEEEEEEEEEec
Q 039556 419 SFTFKWVLTNVDDTSSVNTAAVKAPAGMKVVVQPETATFDRKYSKAEFNLTLSID 473 (515)
Q Consensus 419 ~~t~~rtvtNvg~~~~tY~~~v~~p~g~~v~v~P~~l~~~~~g~~~~~~Vt~~~~ 473 (515)
..+-..+++|.++...-|++.-..|.-.. |.|..=.+ .+|++..+.|++.+.
T Consensus 26 ~~~~~l~l~N~s~~~vaFKVKTT~p~~y~--VrP~~Gii-~P~~s~~v~V~~q~~ 77 (126)
T 1msp_A 26 KHTYHIKITNAGGRRIGWAIKTTNMRRLS--VDPPCGVL-DPKEKVLMAVSCDTF 77 (126)
T ss_dssp CCCEEEEEEECSSSCEEEEEEESCTTTEE--EESCEEEE-CTTCEEEEEEEECCC
T ss_pred ceEEEEEEECCCCCeEEEEEEcCCCCcEE--EECCCeEE-CCCCEEEEEEEecCC
Confidence 44556789999999999999998887765 56888777 799999999988774
No 68
>3q48_A Chaperone CUPB2; IG fold, periplasmic chaperone; 2.50A {Pseudomonas aeruginosa}
Probab=42.05 E-value=1e+02 Score=29.52 Aligned_cols=54 Identities=11% Similarity=0.097 Sum_probs=37.7
Q ss_pred eEEEEEEEEeccCCCeeeEEEEECCC--------CcEEEEecceEEEecCCcEEEEEEEEEec
Q 039556 419 SFTFKWVLTNVDDTSSVNTAAVKAPA--------GMKVVVQPETATFDRKYSKAEFNLTLSID 473 (515)
Q Consensus 419 ~~t~~rtvtNvg~~~~tY~~~v~~p~--------g~~v~v~P~~l~~~~~g~~~~~~Vt~~~~ 473 (515)
....+.+|+|.++.+.--.+-++... ..-+.|+|..+.+ ++|+++.+.|..+..
T Consensus 43 ~k~~sl~l~N~~~~P~LvQsWid~~~~~~~p~~~~~pfivtPPl~rl-~pg~~q~lRI~~~~~ 104 (257)
T 3q48_A 43 EREVTLRVSNTSGTPVLAQAWIDDGRQDVPPEELQVPFSVTPAVTRV-EPNGGAVLRIAYLKA 104 (257)
T ss_dssp CSEEEEEEEECSSSCEEEEEEEESSCCSSCGGGGCCSEEEESSEEEE-CTTEEEEEEEEECCC
T ss_pred CcEEEEEEEeCCCCeEEEEEEEEcCCCccCcccccCCEEEcCCEEEE-CCCCceEEEEEECCC
Confidence 45678889998875433333344211 2348899999999 799999999976643
No 69
>3sd2_A Putative member of DUF3244 protein family; immunoglobulin-like beta-sandwich, structural genomics, JOIN for structural genomics; HET: MSE; 1.40A {Bacteroides thetaiotaomicron}
Probab=41.87 E-value=1.4e+02 Score=24.41 Aligned_cols=66 Identities=14% Similarity=0.105 Sum_probs=45.1
Q ss_pred cEEEEecCCCCceEEEEEEEEeccCCCeeeEEEEECCCCcEEEEecceEEEecCCcEEEEEEEEEecccccccCCCCCcc
Q 039556 407 SFMIILNNTKSASFTFKWVLTNVDDTSSVNTAAVKAPAGMKVVVQPETATFDRKYSKAEFNLTLSIDLGITVSPKCNYLG 486 (515)
Q Consensus 407 Si~~~~~~~~~~~~t~~rtvtNvg~~~~tY~~~v~~p~g~~v~v~P~~l~~~~~g~~~~~~Vt~~~~~~~~~~~~~~~~~ 486 (515)
.++|.|.+ ..-.++.||+|-..+...|.=....|. .+++ .+ ...++-.|+|.+.... .+
T Consensus 35 vlsV~F~~---~~~~vTItItNe~TG~~VYs~~~s~p~--~i~I-----dL-nge~sG~Y~IeI~~~~----------~~ 93 (101)
T 3sd2_A 35 ILNVSFGR---AKDYAIITVTNKATGEIVHSKTYHNTS--IVMI-----DM-SSCEKGEYTIHIILND----------CL 93 (101)
T ss_dssp EEEEEESS---CCSCEEEEEEETTTCCEEEEEEESSCS--EEEE-----EC-TTSCSEEEEEEEEETT----------EE
T ss_pred EEEEEecc---CCCcEEEEEEECCCCcEEEEEeccCCc--EEEE-----Ec-CCCcCceEEEEEEeCC----------cE
Confidence 66778873 345788899998778889998777643 2222 23 3445788999888753 56
Q ss_pred eEEEEEE
Q 039556 487 NFGYLTW 493 (515)
Q Consensus 487 ~~G~i~~ 493 (515)
+.|+.+.
T Consensus 94 LtG~F~i 100 (101)
T 3sd2_A 94 LEGTFTV 100 (101)
T ss_dssp EEEEEEE
T ss_pred EEEEEEe
Confidence 7777654
No 70
>2cri_A Vesicle-associated membrane protein-associated protein A; VAP-A, VAP-33, beta sandwitch fold, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=41.81 E-value=86 Score=27.15 Aligned_cols=52 Identities=19% Similarity=0.133 Sum_probs=43.1
Q ss_pred eEEEEEEEEeccCCCeeeEEEEECCCCcEEEEecceEEEecCCcEEEEEEEEEec
Q 039556 419 SFTFKWVLTNVDDTSSVNTAAVKAPAGMKVVVQPETATFDRKYSKAEFNLTLSID 473 (515)
Q Consensus 419 ~~t~~rtvtNvg~~~~tY~~~v~~p~g~~v~v~P~~l~~~~~g~~~~~~Vt~~~~ 473 (515)
.++-..+++|..+...-|++.-..|.... |.|..=.+ .+|++..+.|++.+.
T Consensus 32 ~~~~~l~L~N~s~~~VaFKVKTT~p~~y~--VrP~~GiI-~P~~s~~v~V~l~~~ 83 (147)
T 2cri_A 32 VVTTNLKLQNPSDRKVCFKVKTTAPRRYC--VRPNSGII-DPGSIVTVSVMLQPF 83 (147)
T ss_dssp CCCEEEEEECCSSSCEEEEEEESCTTSEE--EESSEEEC-CTTCEEEEEEEECCC
T ss_pred eEEEEEEEECCCCCcEEEEEECCCCccEE--EcCCCcEE-CCCCeEEEEEEECCC
Confidence 45667889999999999999998887665 56887666 799999999998764
No 71
>2bp3_A Filamin A; structural protein, cytoskeleton/complex, actin binding protein, cytoskeleton, complex; 2.32A {Homo sapiens} SCOP: b.1.18.10 PDB: 2aav_A
Probab=30.69 E-value=1.4e+02 Score=23.61 Aligned_cols=66 Identities=11% Similarity=0.089 Sum_probs=41.0
Q ss_pred EEeccCCCeeeEEEEECCCCcEEEEecceEEEecCCcEEEEEEEEEecccccccCCCCCcceEEEEEEEeeCCeeEEEeE
Q 039556 426 LTNVDDTSSVNTAAVKAPAGMKVVVQPETATFDRKYSKAEFNLTLSIDLGITVSPKCNYLGNFGYLTWHENIGKHMVRSP 505 (515)
Q Consensus 426 vtNvg~~~~tY~~~v~~p~g~~v~v~P~~l~~~~~g~~~~~~Vt~~~~~~~~~~~~~~~~~~~G~i~~~~~~~~~~vr~P 505 (515)
|+-.+......++.+..|.++.+.+. - ... -+|.|++++... +.+.=.|.| ++.|.--||
T Consensus 29 v~t~dag~~~l~v~v~~p~~~~~~v~-----d-~~d--Gty~v~Y~p~~~---------G~y~i~V~~---~g~~I~gSP 88 (97)
T 2bp3_A 29 VNTKDAGEGGLSLAIEGPSKAEISCT-----D-NQD--GTCSVSYLPVLP---------GDYSILVKY---NEQHVPGSP 88 (97)
T ss_dssp EECTTCCSEEEEEEEEESSCCEEEEE-----E-CSS--SEEEEEEECSSC---------EEEEEEEEE---TTEECTTCS
T ss_pred EEECCCCCCcEEEEEECCCCCEEEEE-----E-CCC--CEEEEEEEeCCC---------CcEEEEEEE---CCEECCCcC
Confidence 33333334567777777877655431 1 122 378899987642 334445556 678999999
Q ss_pred EEEEEe
Q 039556 506 IVSAFA 511 (515)
Q Consensus 506 ~~v~~~ 511 (515)
|.+.+.
T Consensus 89 F~v~v~ 94 (97)
T 2bp3_A 89 FTARVT 94 (97)
T ss_dssp EEEEEE
T ss_pred EEEEEe
Confidence 998864
No 72
>4ay0_A Chaperone protein CAF1M; amino acid motifs, bacterial capsules, bacterial proteins, gene expression regulation, molecular chaperones, binding; 1.52A {Yersinia pestis} PDB: 1p5v_A 1p5u_A 1z9s_A 2os7_A 3dos_A 3dpb_A 3dsn_A 4b0m_M 4az8_A 4ayf_A
Probab=30.04 E-value=1.7e+02 Score=27.14 Aligned_cols=55 Identities=9% Similarity=0.051 Sum_probs=37.1
Q ss_pred ceEEEEEEEEeccCCCeeeEEEEECC---C--CcEEEEecceEEEecCCcEEEEEEEEEec
Q 039556 418 ASFTFKWVLTNVDDTSSVNTAAVKAP---A--GMKVVVQPETATFDRKYSKAEFNLTLSID 473 (515)
Q Consensus 418 ~~~t~~rtvtNvg~~~~tY~~~v~~p---~--g~~v~v~P~~l~~~~~g~~~~~~Vt~~~~ 473 (515)
+...++.+|+|.++.+.--.+-++.. . ..-+.|+|..+.+ ++|+++.+.|..+..
T Consensus 26 ~~k~~sl~l~N~~~~p~LvQswv~~~~~~~~~~~pFivtPPl~Rl-~p~~~q~lRI~~~~~ 85 (218)
T 4ay0_A 26 DAAGVMVSVKNTQDYPVLIQSRIYDENKEKESEDPFVVTPPLFRL-DAKQQNSLRIAQAGG 85 (218)
T ss_dssp TCSCEEEEEECCSSSCEEEEEEEECTTSCCCSSCSEEEESSEEEE-CTTCEEEEEEEECSC
T ss_pred CCcEEEEEEEcCCCCCEEEEEEEecCCCCccccCCEEECCCeEEe-CCCCceEEEEEecCC
Confidence 34567788899876543333334321 1 2337789999999 799999999977643
No 73
>3rfr_A PMOB; membrane, oxidoreductase; 2.68A {Methylocystis SP} PDB: 3chx_A
Probab=29.67 E-value=89 Score=31.89 Aligned_cols=49 Identities=14% Similarity=0.184 Sum_probs=33.4
Q ss_pred ceEEEEEEEEeccCCCee---eE-EEEE--C----------CC------CcEEEEecceEEEecCCcEEEEEEEEEe
Q 039556 418 ASFTFKWVLTNVDDTSSV---NT-AAVK--A----------PA------GMKVVVQPETATFDRKYSKAEFNLTLSI 472 (515)
Q Consensus 418 ~~~t~~rtvtNvg~~~~t---Y~-~~v~--~----------p~------g~~v~v~P~~l~~~~~g~~~~~~Vt~~~ 472 (515)
...+++.+|||.|+.+.. |+ +.+. . |. | ++ +|+ -+ ++||+++++|+++-
T Consensus 298 R~l~~~~~VtN~g~~pvrlgeF~tA~vrFlnp~v~~~~~~~p~~l~a~~G--L~-s~~--pI-~PGETrt~~V~a~d 368 (419)
T 3rfr_A 298 RELTINVKVKNGTSQPVRLGEYTAAGLRFLNPTVFTQKPDFPDYLLADRG--LS-NDD--VI-APGESKEIVVKIQD 368 (419)
T ss_dssp SEEEEEEEEECCSSSCBEEEEEECSSCEEECTTTCSSCCCCCTTTEESCC--CC-CCC--CB-CTTCEEEEEEEEEC
T ss_pred cEEEEEEEEecCCCCceEEeeEEEccEEEeCcccccCCCCCchhhhhccC--CC-CCC--Cc-CCCcceEEEEEeeh
Confidence 678899999999997642 22 1111 1 11 3 45 676 56 89999999988764
No 74
>2l0d_A Cell surface protein; structural genomics, northeast structural genomics consortiu PSI-2, protein structure initiative; NMR {Methanosarcina acetivorans}
Probab=28.95 E-value=2.2e+02 Score=23.64 Aligned_cols=24 Identities=8% Similarity=0.055 Sum_probs=18.0
Q ss_pred ceEEEEEEEEeccCCC-eeeEEEEE
Q 039556 418 ASFTFKWVLTNVDDTS-SVNTAAVK 441 (515)
Q Consensus 418 ~~~t~~rtvtNvg~~~-~tY~~~v~ 441 (515)
...+++.+|+|.|... ..+++.+.
T Consensus 19 ~~~ti~atVkN~G~~~a~~~~V~ly 43 (114)
T 2l0d_A 19 TVNTMTATIENQGNKDSTSFNVSLL 43 (114)
T ss_dssp SEEEEEEEEEECSSSCBCCEEEEEE
T ss_pred CeEEEEEEEEECCCCCCCCEEEEEE
Confidence 5789999999999743 44666654
No 75
>2k9u_A Gamma filamin; cytoskeletal complex, alternative splicing, cell adhesion, cell junction, cell shape, cytoplasm, cytoskeleton; NMR {Homo sapiens}
Probab=28.90 E-value=2e+02 Score=23.59 Aligned_cols=67 Identities=12% Similarity=0.145 Sum_probs=42.4
Q ss_pred EEEeccCCCeeeEEEEECCCCcEEEEecceEEEecCCcEEEEEEEEEecccccccCCCCCcceEEEEEEEeeCCeeEEEe
Q 039556 425 VLTNVDDTSSVNTAAVKAPAGMKVVVQPETATFDRKYSKAEFNLTLSIDLGITVSPKCNYLGNFGYLTWHENIGKHMVRS 504 (515)
Q Consensus 425 tvtNvg~~~~tY~~~v~~p~g~~v~v~P~~l~~~~~g~~~~~~Vt~~~~~~~~~~~~~~~~~~~G~i~~~~~~~~~~vr~ 504 (515)
+|+-........++.+..|.++.+.+. ..+--+|.|++++... +.+.=.|.| ++.|.--|
T Consensus 40 ~v~t~dag~~~l~v~v~~p~~~~~~v~--------d~~dGty~v~Y~p~~~---------G~y~I~V~~---~g~~I~gS 99 (119)
T 2k9u_A 40 SIWTREAGAGGLSIAVEGPSKAEIAFE--------DRKDGSCGVSYVVQEP---------GDYEVSIKF---NDEHIPDS 99 (119)
T ss_dssp EEECCSSCSEEEEEEEESSSCCEEEEE--------CCSSSEEEEEEECCSS---------EEEEEEEEE---TSCBCSSC
T ss_pred EEEECCCCCCcEEEEEeCCCCCeEEEE--------ECCCCEEEEEEEECCC---------ceEEEEEEE---CCEECCCC
Confidence 333333345577888888877554331 2222478888887642 344445666 67899999
Q ss_pred EEEEEEe
Q 039556 505 PIVSAFA 511 (515)
Q Consensus 505 P~~v~~~ 511 (515)
||.+...
T Consensus 100 PF~v~v~ 106 (119)
T 2k9u_A 100 PFVVPVA 106 (119)
T ss_dssp SEEEEEE
T ss_pred CEEEEEe
Confidence 9999875
No 76
>2xg5_A PAPD, chaperone protein PAPD; chaperone, chaperone-surface active protein complex; HET: EC2 EC5; 2.00A {Escherichia coli} PDB: 1pdk_A 2uy6_A 2uy7_A 2j2z_A 2xg4_A* 2w07_A* 3me0_A* 1n0l_A 2wmp_A 3dpa_A 2j7l_A 1qpp_A 1qpx_A
Probab=28.52 E-value=2.2e+02 Score=26.31 Aligned_cols=53 Identities=11% Similarity=0.123 Sum_probs=36.8
Q ss_pred eEEEEEEEEeccCC-CeeeEEEEECCC-----CcEEEEecceEEEecCCcEEEEEEEEEe
Q 039556 419 SFTFKWVLTNVDDT-SSVNTAAVKAPA-----GMKVVVQPETATFDRKYSKAEFNLTLSI 472 (515)
Q Consensus 419 ~~t~~rtvtNvg~~-~~tY~~~v~~p~-----g~~v~v~P~~l~~~~~g~~~~~~Vt~~~ 472 (515)
....+.+|+|.++. +.--.+-++... ..-+.|+|..+.+ ++|+++.+.|..+.
T Consensus 15 ~k~~sl~l~N~~~~~p~LvQsWi~~~~~~~~~~~pfivtPPl~rl-~p~~~q~lRI~~~~ 73 (218)
T 2xg5_A 15 EKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPPVQRL-EPGAKSMVRLSTTP 73 (218)
T ss_dssp SSEEEEEEEECCSSSCEEEEEEEECTTSCEECSSSEEEECSEEEE-CTTCEEEEEEEECG
T ss_pred CCEEEEEEEcCCCCCcEEEEEEEecCCCCccccCCEEEcCCeEEE-CCCCceEEEEEecC
Confidence 45677888898764 433333344321 2347899999999 79999999997765
No 77
>3afg_A Subtilisin-like serine protease; propeptide, thermococcus kodakaraensis, hydrolas protease; 2.00A {Thermococcus kodakarensis}
Probab=28.25 E-value=18 Score=38.75 Aligned_cols=44 Identities=11% Similarity=0.207 Sum_probs=39.8
Q ss_pred CceEEEeccccceEEeecCHHHHHhh-----------cCCCCeEEEEeCccccccc
Q 039556 16 PTHLYTYNHVVDGFSAVLSQTHLDQL-----------QKLPGHHATYIETFGHLHT 60 (515)
Q Consensus 16 ~~i~ysY~~~~~GFaA~lt~~~~~~L-----------~~~p~V~~Ve~D~~~~l~t 60 (515)
.+++|+|+ .|+||+++|+++++++| +++|+|.+||+|+.+++..
T Consensus 60 ~~v~~~~~-~~~g~~~~l~~~~~~~l~~~~~~~~~~~~~~~~V~~v~~d~~~~~~~ 114 (539)
T 3afg_A 60 AKIKYNYH-IIPALAVKIKVKDLLIIAGLMDTGYFGNAQLSGVQFIQEDYVVKVAV 114 (539)
T ss_dssp CEEEEECS-SSSEEEEEEEHHHHHHHTTCSCCC---CCCCTTEEEEEECCEEECC-
T ss_pred CeEEEEee-eeeEEEEEeCHHHHHHHHhhccccccccccCCCeeEEEecccccccC
Confidence 57999996 69999999999999999 8999999999999998753
No 78
>1wgl_A TOLL-interacting protein; CUE domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, immune system; NMR {Homo sapiens} SCOP: a.5.2.4
Probab=26.50 E-value=49 Score=24.38 Aligned_cols=32 Identities=13% Similarity=0.038 Sum_probs=25.1
Q ss_pred hhHHHHHHHHHHhhCCCCCHHHHHHHHHhccc
Q 039556 293 CPHVAGIAALLKAMQRDWSSAAIRSAMMTTAY 324 (515)
Q Consensus 293 aPhVAG~aALl~~~~p~~s~~~i~~~L~~tA~ 324 (515)
-|..--....|++.+|+++...|+..|...-.
T Consensus 6 ~~~~ee~l~~L~emFP~ld~~~I~~vL~a~~g 37 (59)
T 1wgl_A 6 SGCSEEDLKAIQDMFPNMDQEVIRSVLEAQRG 37 (59)
T ss_dssp SSSCHHHHHHHHHHCSSSCHHHHHHHHTTTTT
T ss_pred CCCCHHHHHHHHHHCCCCCHHHHHHHHHHcCC
Confidence 33444567789999999999999999987543
No 79
>4djm_A DRAB; chaperone, PILI; 2.52A {Escherichia coli}
Probab=24.95 E-value=2.3e+02 Score=26.63 Aligned_cols=51 Identities=14% Similarity=0.051 Sum_probs=35.6
Q ss_pred eEEEEEEEEeccCCCeeeEE--EEECC---CCcEEEEecceEEEecCCcEEEEEEEEEe
Q 039556 419 SFTFKWVLTNVDDTSSVNTA--AVKAP---AGMKVVVQPETATFDRKYSKAEFNLTLSI 472 (515)
Q Consensus 419 ~~t~~rtvtNvg~~~~tY~~--~v~~p---~g~~v~v~P~~l~~~~~g~~~~~~Vt~~~ 472 (515)
...++.+|+|.++.+ |-+ -++.. ...-+.|+|..+.+ .+|+++.+.|..+.
T Consensus 37 ~k~~sl~l~N~~~~P--~LvQsWv~~~~~~~~~pfivtPPlfRl-ep~~~q~lRIi~~~ 92 (239)
T 4djm_A 37 SSGETLTVINDQDYP--MLVQSEVLSEDQKSPAPFVVTPPLFRL-DGQQSSRLRIVRTG 92 (239)
T ss_dssp SSCEEEEEEECSSSC--EEEEEEEECTTSSSBCSEEEESSEEEE-CTTEEEEEEEEECS
T ss_pred CCEEEEEEEeCCCCc--EEEEEEEEcCCCCccCCEEEcCCeEEE-CCCCceEEEEEECC
Confidence 455677888987654 443 23321 12448899999999 79999999997654
No 80
>1klf_A FIMC chaperone, chaperone protein FIMC; adhesin-chaperone complex, mannose-bound, chaperone/adhesin complex complex; HET: MAN; 2.79A {Escherichia coli} SCOP: b.1.11.1 b.7.2.1 PDB: 1kiu_A* 3rfz_C 1qun_A 1bf8_A 1ze3_C 3bwu_C 3jwn_C
Probab=23.39 E-value=2.8e+02 Score=25.29 Aligned_cols=53 Identities=11% Similarity=0.144 Sum_probs=36.0
Q ss_pred eEEEEEEEEeccCC-CeeeEEEEECC---CCcEEEEecceEEEecCCcEEEEEEEE-Ee
Q 039556 419 SFTFKWVLTNVDDT-SSVNTAAVKAP---AGMKVVVQPETATFDRKYSKAEFNLTL-SI 472 (515)
Q Consensus 419 ~~t~~rtvtNvg~~-~~tY~~~v~~p---~g~~v~v~P~~l~~~~~g~~~~~~Vt~-~~ 472 (515)
....+.+|+|.++. +.--.+-++.. ...-+.|+|..+.+ ++|+++.+.|.. +.
T Consensus 15 ~k~~sl~l~N~~~~~p~LvQsWi~~~~~~~~~pfivtPPl~rl-~p~~~q~lRI~~~~~ 72 (205)
T 1klf_A 15 QKQVQLAVTNNDENSTYLIQSWVENADGVKDGRFIVTPPLFAM-KGKKENTLRILDATN 72 (205)
T ss_dssp CSEEEEEEEECCSSCCEEEEEEEEETTSCCCSSEEEESSEEEE-CSSEEEEEEEEECSC
T ss_pred CcEEEEEEEcCCCCCcEEEEEEEecCCCCccCCEEEcCCeEEE-CCCCceEEEEEecCC
Confidence 45677788888764 32222223321 23457899999999 799999999977 44
No 81
>3cfu_A Uncharacterized lipoprotein YJHA; YJHA_bacsu, SR562, NESG, structural genomics, PSI-2, protein structure initiative; 2.40A {Bacillus subtilis}
Probab=23.09 E-value=1.7e+02 Score=25.74 Aligned_cols=56 Identities=16% Similarity=0.136 Sum_probs=37.2
Q ss_pred eEEEEEEEEeccCCCeeeE---EEEECCCCcEE--EEe----cceE---EEecCCcEEEEEEEEEeccc
Q 039556 419 SFTFKWVLTNVDDTSSVNT---AAVKAPAGMKV--VVQ----PETA---TFDRKYSKAEFNLTLSIDLG 475 (515)
Q Consensus 419 ~~t~~rtvtNvg~~~~tY~---~~v~~p~g~~v--~v~----P~~l---~~~~~g~~~~~~Vt~~~~~~ 475 (515)
-..+..||+|.|+...+|. +.+....|-+. ... +..| .+ .+|++.+-.|.|.++..
T Consensus 48 fviV~VTIeN~g~e~~~~s~~~F~L~d~dG~~~~~~~~~~~~~~~l~~g~L-~pG~kvtG~ivFeVP~~ 115 (159)
T 3cfu_A 48 RLIIEVTMENIGEDSISYNFIGFDLRDKNDQSVRPVFSIEEKGRILMGGTL-VSGKKVTGVLSYVIPKG 115 (159)
T ss_dssp EEEEEEEEEECSSSCEEEEGGGEEEECTTCCBCCCEECSTTTTTBCCEEEE-CTTCEEEEEEEEEESTT
T ss_pred EEEEEEEEEECCCCceeeCcccEEEEeCCCCEEeceeeecccCCccccccc-CCCCEEEEEEEEEECCC
Confidence 5678999999998876653 45544443221 111 1122 55 79999999999999864
No 82
>2co7_B SAFB chaperone, putative fimbriae assembly chaperone; pilus subunit, adhesion, strand complementation, pathogenesis, fibril protein; 1.8A {Salmonella typhimurium} SCOP: b.1.11.1 b.7.2.1 PDB: 2co6_B
Probab=22.87 E-value=2.3e+02 Score=26.26 Aligned_cols=53 Identities=11% Similarity=0.135 Sum_probs=35.7
Q ss_pred eEEEEEEEEeccCCCeeeEEEEECC---CCcEEEEecceEEEecCCcEEEEEEEEEe
Q 039556 419 SFTFKWVLTNVDDTSSVNTAAVKAP---AGMKVVVQPETATFDRKYSKAEFNLTLSI 472 (515)
Q Consensus 419 ~~t~~rtvtNvg~~~~tY~~~v~~p---~g~~v~v~P~~l~~~~~g~~~~~~Vt~~~ 472 (515)
....+.+|+|.++.+.--.+-++.. ...-+.|+|..+.+ ++|+++.+.|..+.
T Consensus 27 ~k~~sl~l~N~~~~p~LvQsWv~~~~~~~~~pfivtPPl~rl-~p~~~q~lRI~~~~ 82 (221)
T 2co7_B 27 TAGATLSVSNPQNYPILVQSSVKAADKSSPAPFLVMPPLFRL-EANQQSQLRIVRTG 82 (221)
T ss_dssp SSCEEEEEECCSSSCEEEEEEEEETTSSSBCSEEEESSEEEE-CTTCEEEEEEEECC
T ss_pred CCEEEEEEEcCCCCcEEEEEEEecCCCCccCCEEEeCCEEEE-CCCCceEEEEEECC
Confidence 4456777888876532222223321 23457899999999 79999999998765
No 83
>2l04_A Major tail protein V; bacteriophage lambda, phage tail, GPV, IG-like domain, viral; NMR {Enterobacteria phage lambda}
Probab=22.35 E-value=66 Score=25.74 Aligned_cols=27 Identities=11% Similarity=0.199 Sum_probs=21.9
Q ss_pred EEEEecceEEEecCCcEEEEEEEEEecc
Q 039556 447 KVVVQPETATFDRKYSKAEFNLTLSIDL 474 (515)
Q Consensus 447 ~v~v~P~~l~~~~~g~~~~~~Vt~~~~~ 474 (515)
.|++.|..+++ ..|++..++.++.+.+
T Consensus 8 ~i~l~~~~~~l-~vG~t~~L~atv~P~~ 34 (91)
T 2l04_A 8 GMTVTPASTSV-VKGQSTTLTVAFQPEG 34 (91)
T ss_dssp CEEEECCCEEE-ETTCEEEEEEEECCSS
T ss_pred EEEEeCCceEE-EcCCEEEEEEEEeccc
Confidence 46678999999 6999988888887655
No 84
>2ixt_A 36KDA protease; serine protease, sphericase, subtilisin like protease, hydrolase; 0.8A {Bacillus sphaericus} SCOP: c.41.1.1 PDB: 3d43_A 1ea7_A* 2gko_A*
Probab=21.95 E-value=32 Score=33.42 Aligned_cols=25 Identities=20% Similarity=0.162 Sum_probs=18.7
Q ss_pred eecceEEeecCCCCCCCCceeeecc
Q 039556 84 IEERIFAECSAGNLGPDAYSIFNGA 108 (515)
Q Consensus 84 ~~~GI~vv~sAGN~Gp~~~tv~n~a 108 (515)
.++||++++||||+|....++..++
T Consensus 157 ~~~gv~vV~AAGN~g~~~~~~~~Pa 181 (310)
T 2ixt_A 157 YSKGVLIVAAAGNSGYSQGTIGYPG 181 (310)
T ss_dssp HHTTCEEEEECCSCCSSTTCCCBTT
T ss_pred HhCCcEEEEcCCCCCCCCCCCCCcc
Confidence 5799999999999997644443333
No 85
>2ee6_A Filamin-B; beta-sandwich, immunoglobulin-like fold, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=21.75 E-value=1.4e+02 Score=23.93 Aligned_cols=60 Identities=10% Similarity=0.108 Sum_probs=39.0
Q ss_pred CeeeEEEEECCCCcEEEEecceEEEecCCcEEEEEEEEEecccccccCCCCCcceEEEEEEEeeCCeeEEEeEEEEEEee
Q 039556 433 SSVNTAAVKAPAGMKVVVQPETATFDRKYSKAEFNLTLSIDLGITVSPKCNYLGNFGYLTWHENIGKHMVRSPIVSAFAN 512 (515)
Q Consensus 433 ~~tY~~~v~~p~g~~v~v~P~~l~~~~~g~~~~~~Vt~~~~~~~~~~~~~~~~~~~G~i~~~~~~~~~~vr~P~~v~~~~ 512 (515)
....++.+..|.+..+.+. -.+--+|+|++++... +.+.=.|.| ++.|.-.|||.+....
T Consensus 41 ~~~l~v~v~~p~~~~v~v~--------d~~dGty~v~Y~p~~~---------G~y~I~V~~---~g~~I~gSPF~v~v~~ 100 (105)
T 2ee6_A 41 AGGLSIAVEGPSKAEITFD--------DHKNGSCGVSYIAQEP---------GNYEVSIKF---NDEHIPESPYLVPVIA 100 (105)
T ss_dssp CCCEEEEEESSSCEEEEEC--------CCCSSCCCEEEEESSC---------EEEEEEEEE---TTEECTTCSEEEEEEC
T ss_pred CCcEEEEEECCCCCEEEEE--------ECCCCEEEEEEEECCC---------ceEEEEEEE---CCEECCCcCEEEEEcC
Confidence 4467788888888665331 2222468888887642 334444555 6789999999987753
No 86
>2ofk_A 3-methyladenine DNA glycosylase I, constitutive; DNA repair, base excision, helix-hairpin-helix, hydrolase; HET: PGE; 1.50A {Salmonella typhi} PDB: 2ofi_A* 1lmz_A 1nku_A 1p7m_A*
Probab=21.73 E-value=13 Score=34.05 Aligned_cols=29 Identities=17% Similarity=0.332 Sum_probs=25.1
Q ss_pred EEeccccceEE----eecCHHHHHhhcCCCCeE
Q 039556 20 YTYNHVVDGFS----AVLSQTHLDQLQKLPGHH 48 (515)
Q Consensus 20 ysY~~~~~GFa----A~lt~~~~~~L~~~p~V~ 48 (515)
..|+.+|.||- |.++++++++|.++|+++
T Consensus 54 e~fr~AF~~Fd~~~VA~~~e~~ve~Ll~d~~II 86 (183)
T 2ofk_A 54 ENYRACFHQFDPIRIAAMQEEDVERLLQNTGII 86 (183)
T ss_dssp HHHHHHTGGGCHHHHHTCCHHHHHHHTTCTTSC
T ss_pred HHHHHHHcCCCHHHHcCCCHHHHHHHhcCCcch
Confidence 46889999994 569999999999999974
No 87
>2w0p_A Filamin-A; alternative splicing, cytoskeleton/complex, phosphoprotein, disease mutation, immunoglobulin like, zinc, complex; 1.90A {Homo sapiens} SCOP: b.1.18.10 PDB: 2brq_A* 2jf1_A 3isw_A
Probab=21.38 E-value=1.4e+02 Score=23.41 Aligned_cols=58 Identities=16% Similarity=0.142 Sum_probs=36.8
Q ss_pred eeeEEEEECCCCcEEEEecceEEEecCCcEEEEEEEEEecccccccCCCCCcceEEEEEEEeeCCeeEEEeEEEEEEe
Q 039556 434 SVNTAAVKAPAGMKVVVQPETATFDRKYSKAEFNLTLSIDLGITVSPKCNYLGNFGYLTWHENIGKHMVRSPIVSAFA 511 (515)
Q Consensus 434 ~tY~~~v~~p~g~~v~v~P~~l~~~~~g~~~~~~Vt~~~~~~~~~~~~~~~~~~~G~i~~~~~~~~~~vr~P~~v~~~ 511 (515)
...++.++.|.++.+.+ .- . +.-+|.|++++... +.+.=.|.| ++.|.--|||.+.+.
T Consensus 34 ~~~~v~v~gp~~~~~~v-----~d-~--~dGty~v~Y~p~~~---------G~y~I~V~~---~g~~I~gSPF~v~v~ 91 (94)
T 2w0p_A 34 GGLAIAVEGPSKAEISF-----ED-R--KDGSCGVAYVVQEP---------GDYEVSVKF---NEEHIPDSPFVVPVA 91 (94)
T ss_dssp CCEEEEEEESSCCEEEE-----EE-C--TTSCEEEEEECSSC---------EEEEEEEEE---TTEECTTCSEEEEEE
T ss_pred CcEEEEEECCCCCeEEE-----EE-C--CCCEEEEEEEECCC---------ceEEEEEEE---CCEECCCCCEEEEEe
Confidence 35667777777765443 11 1 22368888887642 334445555 678999999998765
No 88
>2jg6_A DNA-3-methyladenine glycosidase; 3-methyladenine-DNA-glycosylase-I, hydrolase; 1.70A {Staphylococcus aureus} PDB: 4aia_A* 4ai5_A* 4ai4_A
Probab=20.93 E-value=14 Score=33.86 Aligned_cols=30 Identities=20% Similarity=0.367 Sum_probs=25.5
Q ss_pred EEEeccccceEE----eecCHHHHHhhcCCCCeE
Q 039556 19 LYTYNHVVDGFS----AVLSQTHLDQLQKLPGHH 48 (515)
Q Consensus 19 ~ysY~~~~~GFa----A~lt~~~~~~L~~~p~V~ 48 (515)
...|+.+|.||- |.++++++++|.++|+++
T Consensus 53 Re~fR~AF~~FD~~~VA~~~e~dve~Ll~d~gII 86 (186)
T 2jg6_A 53 KEAYEEAFYDFEPEKVAQMTAQDIDRLMTFPNIV 86 (186)
T ss_dssp HHHHHHHTGGGCHHHHTTCCHHHHHHHTTCTTSC
T ss_pred HHHHHHHHcCCCHHHHhCCCHHHHHHHhcCccch
Confidence 346889999994 679999999999999974
Done!