Query 039563
Match_columns 472
No_of_seqs 137 out of 1259
Neff 8.6
Searched_HMMs 29240
Date Mon Mar 25 18:51:51 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/039563.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/039563hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4g22_A Hydroxycinnamoyl-COA sh 100.0 3.2E-79 1.1E-83 632.7 39.2 412 2-454 5-434 (439)
2 2bgh_A Vinorine synthase; VS, 100.0 4.2E-79 1.4E-83 628.6 37.7 411 1-467 1-420 (421)
3 2e1v_A Acyl transferase; BAHD 100.0 2.7E-72 9.4E-77 583.6 32.4 419 3-460 5-448 (454)
4 2xr7_A Malonyltransferase; xen 100.0 4.9E-72 1.7E-76 581.7 31.6 414 5-460 2-448 (453)
5 2rkv_A Trichothecene 3-O-acety 100.0 1.9E-65 6.5E-70 532.0 30.5 405 26-464 5-449 (451)
6 1q9j_A PAPA5, polyketide synth 98.9 1.3E-07 4.3E-12 95.8 22.4 280 24-350 6-314 (422)
7 2jgp_A Tyrocidine synthetase 3 98.4 2.8E-05 9.5E-10 81.0 23.4 244 67-350 132-401 (520)
8 1l5a_A Amide synthase, VIBH; n 98.4 3.7E-05 1.3E-09 78.0 21.7 246 67-350 34-305 (436)
9 4hvm_A Tlmii; PSI-biology, mid 98.2 2.6E-05 9E-10 80.6 17.3 275 24-350 12-328 (493)
10 2vsq_A Surfactin synthetase su 98.0 0.00012 4.2E-09 84.8 19.0 251 67-350 48-328 (1304)
11 2xhg_A Tyrocidine synthetase A 97.8 0.0023 7.8E-08 65.2 21.9 279 24-350 16-336 (466)
12 3fot_A 15-O-acetyltransferase; 97.5 0.0029 9.8E-08 65.7 16.9 158 158-324 177-365 (519)
13 3cla_A Type III chloramphenico 65.9 4.3 0.00015 36.4 3.6 45 143-187 163-209 (213)
14 2i9d_A Chloramphenicol acetylt 64.3 4.8 0.00017 36.2 3.6 44 143-186 171-216 (217)
15 1q23_A Chloramphenicol acetylt 63.8 5 0.00017 36.2 3.6 44 144-187 168-213 (219)
16 3rqc_A Probable lipoamide acyl 59.6 5.6 0.00019 36.0 3.1 30 159-188 187-216 (224)
17 3b8k_A PDCE2;, dihydrolipoylly 59.4 6.4 0.00022 36.0 3.5 29 159-187 204-232 (239)
18 1scz_A E2, dihydrolipoamide su 58.6 6.9 0.00024 35.6 3.6 30 159-188 196-225 (233)
19 1dpb_A Dihydrolipoyl-transacet 58.2 7 0.00024 35.8 3.6 30 159-188 208-237 (243)
20 2ii3_A Lipoamide acyltransfera 56.7 7.7 0.00026 36.0 3.6 30 159-188 224-253 (262)
21 3mae_A 2-oxoisovalerate dehydr 50.1 11 0.00039 34.7 3.6 30 159-188 210-239 (256)
22 3l60_A Branched-chain alpha-ke 48.4 13 0.00043 34.3 3.6 30 159-188 205-234 (250)
23 2xl1_A Arginine attenuator pep 42.6 15 0.0005 20.1 1.8 19 263-281 6-24 (26)
24 3dva_I Dihydrolipoyllysine-res 30.6 11 0.00036 37.8 0.0 30 159-188 391-420 (428)
25 2k1o_A Putative; repressor, tr 27.1 93 0.0032 21.2 4.1 44 231-286 13-56 (66)
26 1x93_A Hypothetical protein HP 20.6 1.4E+02 0.0047 19.6 3.8 22 234-255 2-23 (55)
No 1
>4g22_A Hydroxycinnamoyl-COA shikimate/quinate hydroxycinnamoyltransferase; BAHD superfamily; 1.70A {Coffea canephora} PDB: 4g2m_A 4g0b_A
Probab=100.00 E-value=3.2e-79 Score=632.74 Aligned_cols=412 Identities=23% Similarity=0.389 Sum_probs=334.0
Q ss_pred CceEEEEeeeeecCCCCCCCCCCcccCCcccccCCCCCccEEEEecCCCCCCCCCcccccCCchhhHHHHHHHHHHhhcc
Q 039563 2 NMQLRIISKEIIKPSSPTPHHLKTHKLSLLDQLAPDIYLPIVLFYDSSSRVDDKTSTATINSTNNISRRLKNSLSKTLTH 81 (472)
Q Consensus 2 ~~~v~~~~~~~v~p~~~~~~~~~~~~LS~lD~~~~~~y~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~L~~sL~~~L~~ 81 (472)
.|+|+++++++|+|+.|+|+ +.++||+||+.+++.|++.+|||+.++ . .....+++||+||+++|++
T Consensus 5 ~~~V~i~~~~~V~P~~~tp~--~~~~LS~lD~~~~~~~~~~~~~y~~~~----~-------~~~~~~~~Lk~sLs~~L~~ 71 (439)
T 4g22_A 5 SMKIEVKESTMVRPAQETPG--RNLWNSNVDLVVPNFHTPSVYFYRPTG----S-------SNFFDAKVLKDALSRALVP 71 (439)
T ss_dssp -CCEEEEEEEEECCSSCCCC--CEECCCHHHHSCCTTCCCEEEEECCCS----C-------TTTTCHHHHHHHHHHHTTT
T ss_pred ceEEEEeeeEEEeCCCCCCC--CeecCChhHhCccccceeeEEEEcCCC----C-------ccccHHHHHHHHHHHHHhh
Confidence 58899999999999999875 579999999998899999999999754 2 1234689999999999999
Q ss_pred cCCCCcccccc--CCeeEeeCCCCeeEEEEEeCcchhcccCCCChhhhcccCCCCCCCCCCCCCCceEEEEEEEEccCcE
Q 039563 82 YYPFAGRVLLK--DNYVIDCDDSGVPVVETLVGSNMFDVLNFPEMDTLEQLLPFNPNKKHLSTHDVTVAVQINYFHCGGV 159 (472)
Q Consensus 82 ~p~LaGrv~~~--~~~~i~~~~~gv~f~~a~~~~~~~dl~~~p~~~~l~~l~P~~~~~~~~~~~~Pll~vQvt~~~cGGl 159 (472)
||+|||||+.. ++++|+||++||.|++|+++.+++|+........+++|+|..+.. .+..+.|++.+|+|+|+|||+
T Consensus 72 f~plAGRl~~~~~g~~~i~c~~~Gv~fv~A~~d~~l~~l~~~~p~~~~~~l~p~~~~~-~~~~~~pll~vQvT~f~cGG~ 150 (439)
T 4g22_A 72 FYPMAGRLKRDEDGRIEIECNGEGVLFVEAESDGVVDDFGDFAPTLELRRLIPAVDYS-QGISSYALLVLQVTYFKCGGV 150 (439)
T ss_dssp TGGGGCEEEECTTSCEEEECCCCCEEEEEEEESSCGGGGTTCCCCGGGGGGSCCCCTT-SCTTSSCSEEEEEEECTTSCE
T ss_pred ccccceeeeeCCCCCEEEEECCCCCEEEEEEcCCcHHHhcCCCCCHHHHhcCCCCCcc-cccccCceeEEEEEEecCCCE
Confidence 99999998554 369999999999999999999999997632234677888876543 234568999999999999999
Q ss_pred EEEeeeeeeccchhhHHHHHHHHHHHhcCCCCCCCcCCccccCCcccCCccCC---CCC--CCCCCCCCccc--c-----
Q 039563 160 AVGFNFRHIVADGAAAIGFIKNWAKLNYSNDDHDINIDVSTKYAVVDCTNIFP---PNK--EISGYSRSINE--W----- 227 (472)
Q Consensus 160 ilg~~~~H~v~Dg~g~~~fl~~wa~~~rg~~~~~~~~~~~~~~P~~dr~~l~~---~~~--~~p~~~~~~~~--~----- 227 (472)
+||+++||.++||.|+.+|+++||++|||. +. ..+|++||+.+.+ |.. ++..|.+.+.. .
T Consensus 151 ~lg~~~~H~v~Dg~~~~~Fl~~wa~~~rg~-------~~-~~~P~~dr~~l~~~~pp~~~~~~~~~~~~~~~~~~~~~~~ 222 (439)
T 4g22_A 151 SLGVGMRHHAADGFSGLHFINSWSDMARGL-------DV-TLPPFIDRTLLRARDPPQPQFQHIEYQPPPALAVSPQTAA 222 (439)
T ss_dssp EEEEEECTTTCCHHHHHHHHHHHHHHHTTC-------CC-SSCCBCCGGGGCCCSSCCCSSCCGGGSCCC----------
T ss_pred EEEEEeeeccCcHHHHHHHHHHHHHHhCCC-------CC-CCCCccccccccCCCCCCCCcCcccccCCCCCcccccccc
Confidence 999999999999999999999999999993 33 4678999986643 211 11222211110 0
Q ss_pred ccC-CceEEEEEEEcHHHHHHHHHHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeEEEEEecCCCCCC
Q 039563 228 QRS-TECVTKRFRFNGSKIAALRREMIMEKASLNLQYRPSRFEAVCGLIWGALLAMDREKHIDSTSTIATIPVNLRNRMN 306 (472)
Q Consensus 228 ~~~-~~~~~~~f~fs~~~l~~Lk~~a~~~~~~~~~~~~~St~dal~AllW~~~~~Ar~~~~~~~~~~~l~~~vd~R~rl~ 306 (472)
... .++..++|+|++++|++||+++..+. ...++|+||+|+||+|+|++|||...+ ++.+.+.++||+|+|++
T Consensus 223 ~~~~~~~~~~~f~fs~~~i~~LK~~a~~~~----~~~~~St~dal~A~iWr~~~rAr~~~~--~~~~~l~~~vd~R~rl~ 296 (439)
T 4g22_A 223 SDSVPETAVSIFKLTREQISALKAKSKEDG----NTISYSSYEMLAGHVWRCACKARGLEV--DQGTKLYIATDGRARLR 296 (439)
T ss_dssp -----CEEEEEEEECHHHHHHHHHGGGGGG----CCCCCCHHHHHHHHHHHHHHHHTTCCT--TCEEEEEEEEECTTTSS
T ss_pred cCCcccceEEEEEECHHHHHHHHHHhhccC----CCCCccHHHHHHHHHHHHHHHhcCCCC--CCcEEEEEEEcccCCCC
Confidence 112 57899999999999999999987432 146799999999999999999997643 57899999999999999
Q ss_pred CCCCCCcccccccee-eecccccccCCCCCHHHHHHHHHHHHHhhchHHHhhhccCCcchhhHhhHHHHHHHhhcCCCCC
Q 039563 307 PPLPEGCIGNLFHAV-TCTENNEAGDGHYNKSTLARNVREFTKMVSDDFVRKVYQDGGVVFVNQYKEAVEELLKDGTNNN 385 (472)
Q Consensus 307 pplp~~Y~GN~~~~~-~~~~~~~l~~~~~~l~~vA~~IR~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 385 (472)
||+|++||||++.++ +.++++||. +.+|+++|.+||+++++++++|+++.++ |++..+.....+. ..
T Consensus 297 Pplp~~Y~GN~v~~~~~~~~~~el~--~~~L~~~A~~Ir~ai~~~~~e~~~~~~~---------~~~~~~~~~~~~~-~~ 364 (439)
T 4g22_A 297 PSLPPGYFGNVIFTATPIAIAGDLE--FKPVWYAASKIHDALARMDNDYLRSALD---------YLELQPDLKALVR-GA 364 (439)
T ss_dssp SCCCTTBCSCCEEEECCEEEHHHHH--HSCHHHHHHHHHHHHHTCSHHHHHHHHH---------HHHTCSCSTTCCC-CH
T ss_pred CCCCCCcccceeehhhcceEHHHHh--hCcHHHHHHHHHHHHHhhCHHHHHHHHH---------HHHhCccchhhcc-cC
Confidence 999999999999999 999999998 8899999999999999999999999877 4432211100000 00
Q ss_pred CCCCCcceEEEEcCCCCCCcccccCCCcceeeeeee-ecCcEEEEeecCCC-CeEEEEEeCCHhhHHhhhc
Q 039563 386 NTTNSVRMFGFSGPIGLQYYGIDFGWGKPLWVTTVM-RLNNVAMLLDTCDG-KGVEAWVGLPINDMSKFEQ 454 (472)
Q Consensus 386 ~~~~~~~~~~vssw~~~~~y~~DFG~G~P~~~~~~~-~~~g~~~i~p~~~~-~g~ev~v~L~~~~m~~l~~ 454 (472)
....+. .+++|||.++++|++|||||||+++++.. +.+|.++++|++++ ||++|.|||++++|++|++
T Consensus 365 ~~~~~~-~~~vssw~r~~~y~~DFGwGkP~~~~~~~~~~~g~~~~~p~~~~~ggi~v~v~L~~~~m~~f~~ 434 (439)
T 4g22_A 365 HTFKCP-NLGITSWVRLPIHDADFGWGRPIFMGPGGIAYEGLSFILPSPTNDGSMSVAISLQGEHMKLFQS 434 (439)
T ss_dssp HHHCTT-CEEEEECTTSCTTCCCCSSCCCSEEEESSCCSTTEEEEEECTTCSSCEEEEEEEEHHHHHHHHH
T ss_pred CcCcCC-cEEEeecCcCCccccccCCCCcceeeccccCCCcEEEEeecCCCCCcEEEEEECCHHHHHHHHH
Confidence 001123 49999999999999999999999999877 67899999998754 4899999999999999997
No 2
>2bgh_A Vinorine synthase; VS, BAHD, acetyltransferase, auto-rickshaw, transferase; 2.6A {Rauvolfia serpentina}
Probab=100.00 E-value=4.2e-79 Score=628.57 Aligned_cols=411 Identities=33% Similarity=0.546 Sum_probs=344.1
Q ss_pred CCceEEEEeeeeecCCCCCCCCCCcccCCcccccCCCCCccEEEEecCCCCCCCCCcccccCCchhhHHHHHHHHHHhhc
Q 039563 1 MNMQLRIISKEIIKPSSPTPHHLKTHKLSLLDQLAPDIYLPIVLFYDSSSRVDDKTSTATINSTNNISRRLKNSLSKTLT 80 (472)
Q Consensus 1 ~~~~v~~~~~~~v~p~~~~~~~~~~~~LS~lD~~~~~~y~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~L~~sL~~~L~ 80 (472)
|.|+|+++++++|+|+.||+++.++++||+||+.+++.|++.+|||+.++ .. ..+...++++||+||+++|+
T Consensus 1 m~m~v~v~~~~~V~P~~ptp~~~~~~~LS~lD~~~~~~~~~~~~~y~~~~----~~----~~~~~~~~~~Lk~sLs~~L~ 72 (421)
T 2bgh_A 1 MAPQMEKVSEELILPSSPTPQSLKCYKISHLDQLLLTCHIPFILFYPNPL----DS----NLDPAQTSQHLKQSLSKVLT 72 (421)
T ss_dssp ---CEEEEEEEEEECSSCCCTTSCCCBCCHHHHTSCSSEEEEEEEECCCS----SC----CCCHHHHHHHHHHHHHHHTT
T ss_pred CCceEEEeeeEEEeCCCCCCCCCcccCCChHHhcccccccceEEEEeCCC----cc----ccchhhHHHHHHHHHHHHhh
Confidence 78999999999999999988755789999999987789999999999765 21 01355789999999999999
Q ss_pred ccCCCCccccccCCeeEeeCCCCeeEEEEEeCcchhcccCC-CChhhhcccCCCCCCCCCC----CCCCceEEEEEEEEc
Q 039563 81 HYYPFAGRVLLKDNYVIDCDDSGVPVVETLVGSNMFDVLNF-PEMDTLEQLLPFNPNKKHL----STHDVTVAVQINYFH 155 (472)
Q Consensus 81 ~~p~LaGrv~~~~~~~i~~~~~gv~f~~a~~~~~~~dl~~~-p~~~~l~~l~P~~~~~~~~----~~~~Pll~vQvt~~~ 155 (472)
+||+||||| .++++|+|+++||.|++|+++.+++|+... |+...++.|+|... . .. ..+.|++.+|+|+|+
T Consensus 73 ~~~plAGRl--~~~~~i~c~~~Gv~fv~A~~d~~l~~~~~~~p~~~~~~~l~p~~~-~-~~~~~~~~~~pll~vQvt~f~ 148 (421)
T 2bgh_A 73 HFYPLAGRI--NVNSSVDCNDSGVPFVEARVQAQLSQAIQNVVELEKLDQYLPSAA-Y-PGGKIEVNEDVPLAVKISFFE 148 (421)
T ss_dssp TSGGGGSEE--ETTTEEECCCCCEEEEEEEESSCHHHHHSCCSSGGGGGGGSSSCS-S-SSSSSCCCTTCSEEEEEEECT
T ss_pred hcchhcccc--CCCcEEEEcCCceEEEEEEEcCCHHHHhccCCChHHHHhcCCCCC-C-ccccccccCCceEEEEEEEEc
Confidence 999999997 358999999999999999999999999765 66567788888762 2 11 456899999999999
Q ss_pred cCcEEEEeeeeeeccchhhHHHHHHHHHHHhcCCCCCCCcCCccccCCcccC-CccCCC-CCCCCCCCCCccccccCCce
Q 039563 156 CGGVAVGFNFRHIVADGAAAIGFIKNWAKLNYSNDDHDINIDVSTKYAVVDC-TNIFPP-NKEISGYSRSINEWQRSTEC 233 (472)
Q Consensus 156 cGGlilg~~~~H~v~Dg~g~~~fl~~wa~~~rg~~~~~~~~~~~~~~P~~dr-~~l~~~-~~~~p~~~~~~~~~~~~~~~ 233 (472)
|||++||+++||.++||.|+.+|+++||++|||. .. ..+|.+|| ..+.++ . ++|. + .+....++
T Consensus 149 cgG~~lg~~~~H~v~Dg~~~~~fl~~wa~~~rg~-------~~-~~~P~~dr~~~l~p~~~-~~~~--~---~~~~~~~~ 214 (421)
T 2bgh_A 149 CGGTAIGVNLSHKIADVLSLATFLNAWTATCRGE-------TE-IVLPNFDLAARHFPPVD-NTPS--P---ELVPDENV 214 (421)
T ss_dssp TSCEEEEEEEETTTCCHHHHHHHHHHHHHHHTTC-------SC-CCCCBCSHHHHHSCCCT-TCCC--C---CCCCCSSE
T ss_pred CCCEEEEEEeeEEechHHHHHHHHHHHHHHhcCC-------CC-CCCCccccccccCCCcc-cCCC--C---ccCCccce
Confidence 9999999999999999999999999999999994 22 25688998 767665 4 4443 1 22234678
Q ss_pred EEEEEEEcHHHHHHHHHHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeEEEEEecCCCCCCCCCCCCc
Q 039563 234 VTKRFRFNGSKIAALRREMIMEKASLNLQYRPSRFEAVCGLIWGALLAMDREKHIDSTSTIATIPVNLRNRMNPPLPEGC 313 (472)
Q Consensus 234 ~~~~f~fs~~~l~~Lk~~a~~~~~~~~~~~~~St~dal~AllW~~~~~Ar~~~~~~~~~~~l~~~vd~R~rl~pplp~~Y 313 (472)
..++|+|++++|++||+.+..+ ....++|+||+|+|++|+|++|||....++++.+.+.++||+|+|++||+|++|
T Consensus 215 ~~~~f~f~~~~i~~LK~~a~~~----~~~~~~St~d~l~A~iW~~~~~Ar~~~~~~~~~~~l~~~vd~R~rl~pplP~~y 290 (421)
T 2bgh_A 215 VMKRFVFDKEKIGALRAQASSA----SEEKNFSRVQLVVAYIWKHVIDVTRAKYGAKNKFVVVQAVNLRSRMNPPLPHYA 290 (421)
T ss_dssp EEEEEEECHHHHHHHHHHTC---------CCCCHHHHHHHHHHHHHHHHHHHHSCCCSCEEEEEEEESGGGSSSCCCTTB
T ss_pred EEEEEEECHHHHHHHHHHhhcc----CCCCCCchhHhHHHHHHHHHHHHhcccCCCCCceEEEEEecCccccCCCCCCCc
Confidence 9999999999999999998733 113689999999999999999998754333568999999999999999999999
Q ss_pred ccccccee-eecccccccCCCCCHHHHHHHHHHHHHhhchHHHhhhccCCcchhhHhhHHHHHHHhhcCCCCCCCCCCcc
Q 039563 314 IGNLFHAV-TCTENNEAGDGHYNKSTLARNVREFTKMVSDDFVRKVYQDGGVVFVNQYKEAVEELLKDGTNNNNTTNSVR 392 (472)
Q Consensus 314 ~GN~~~~~-~~~~~~~l~~~~~~l~~vA~~IR~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 392 (472)
|||++..+ +.+++++ +.+|+++|.+||+++.+++++|++++.+ +.+. +.. ..+.+
T Consensus 291 ~GN~~~~~~~~~~~~~----~~~l~~~a~~ir~ai~~~~~~~~~~~~~---------~~~~---~~~--------~~~~~ 346 (421)
T 2bgh_A 291 MGNIATLLFAAVDAEW----DKDFPDLIGPLRTSLEKTEDDHNHELLK---------GMTC---LYE--------LEPQE 346 (421)
T ss_dssp CSCCEEEEEEEECTTC----CCCGGGGHHHHHHHTCCCSSCHHHHHHH---------HHHH---HHT--------SCGGG
T ss_pred cceEEEEEEEEecccc----cccHHHHHHHHHHHHHHHHHHHHHHHHH---------HHHH---hhc--------cCCCC
Confidence 99999999 8888875 6899999999999999999888886544 3332 210 11234
Q ss_pred eEEEEcCCCCCCcccccCCCcceeeeeee-ecCcEEEEeecCCCCeEEEEEeCCHhhHHhhhcChhccccccCCCC
Q 039563 393 MFGFSGPIGLQYYGIDFGWGKPLWVTTVM-RLNNVAMLLDTCDGKGVEAWVGLPINDMSKFEQDLGILAYASFTSS 467 (472)
Q Consensus 393 ~~~vssw~~~~~y~~DFG~G~P~~~~~~~-~~~g~~~i~p~~~~~g~ev~v~L~~~~m~~l~~d~~~~~~~~~~~~ 467 (472)
.+++|||.++++|++|||||+|+++++.. +.+|.++++|+++++|++|.|+|++++|++|++ ||.+|+++||+
T Consensus 347 ~~~vssw~~~~~y~~DFGwGkP~~v~~~~~~~~g~~~~~p~~~~~gi~v~v~L~~~~m~~f~~--e~~~~~~~~~~ 420 (421)
T 2bgh_A 347 LLSFTSWCRLGFYDLDFGWGKPLSACTTTFPKRNAALLMDTRSGDGVEAWLPMAEDEMAMLPV--ELLSLVDSDFS 420 (421)
T ss_dssp EEEEEEETTSCGGGCCSSSCCCSEEECCCCCSTTEEEEEECTTSSSEEEEEEEEHHHHHHSCH--HHHTTBCCCCC
T ss_pred eEEEeccccCCCcccccCCCccCeecccccCcCCEEEEEecCCCCeEEEEEEcCHHHHHHHHH--HHHHhhcCCCC
Confidence 69999999999999999999999999877 678999999999888999999999999999998 99999999996
No 3
>2e1v_A Acyl transferase; BAHD superfamily, seleno-methionine derivative, dendranthema morifolium, DMAT; 1.80A {Chrysanthemum x morifolium} PDB: 2e1u_A 2e1t_A
Probab=100.00 E-value=2.7e-72 Score=583.64 Aligned_cols=419 Identities=21% Similarity=0.330 Sum_probs=324.8
Q ss_pred ceEEEEeeeeecCCCCCCCCCCcccCCcccccC-CCCCccEEEEecCCCCCCCCCcccccCCchhhHHHHHHHHHHhhcc
Q 039563 3 MQLRIISKEIIKPSSPTPHHLKTHKLSLLDQLA-PDIYLPIVLFYDSSSRVDDKTSTATINSTNNISRRLKNSLSKTLTH 81 (472)
Q Consensus 3 ~~v~~~~~~~v~p~~~~~~~~~~~~LS~lD~~~-~~~y~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~L~~sL~~~L~~ 81 (472)
.+|+++++++|+|+.++++. ++++||+||+.+ ...|++.+|||+.++ ... ...+.++++||+||+++|++
T Consensus 5 ~~v~v~~~~~V~P~~~~~~~-~~~~LS~lD~~~~~~~~~~~~~~y~~~~----~~~----~~~~~~~~~Lk~sLs~~L~~ 75 (454)
T 2e1v_A 5 PILTVLEQSQVSPPPDTLGD-KSLQLTFFDFFWLRSPPINNLFFYELPI----TRS----QFTETVVPNIKHSLSITLKH 75 (454)
T ss_dssp -CEEEEEEEEECCCTTSCCC-EEEECCHHHHTTTTCCCEEEEEEEECCC----CHH----HHHHTHHHHHHHHHHHHHTT
T ss_pred ceEEEEEEEEEeCCCCCCCC-ceecCchHHhhhhccCCccEEEEEeCCC----Ccc----hhhHHHHHHHHHHHHHHhhh
Confidence 48999999999999875443 689999999974 456999999998764 210 01446799999999999999
Q ss_pred cCCCCcccc-cc---CCeeEeeC-CCCeeEEEEEeCcchhcccCC-C-ChhhhcccCCCCCCCC--CCCCCCceEEEEEE
Q 039563 82 YYPFAGRVL-LK---DNYVIDCD-DSGVPVVETLVGSNMFDVLNF-P-EMDTLEQLLPFNPNKK--HLSTHDVTVAVQIN 152 (472)
Q Consensus 82 ~p~LaGrv~-~~---~~~~i~~~-~~gv~f~~a~~~~~~~dl~~~-p-~~~~l~~l~P~~~~~~--~~~~~~Pll~vQvt 152 (472)
||+|||||+ .. ++++|+|+ ++||.|++|+++.+++++... + +...++.|+|..+... .+..+.|++.+|+|
T Consensus 76 ~~plAGRl~~~~~~~g~~~i~c~~~~gv~fv~A~~~~~l~~l~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~pll~vQvT 155 (454)
T 2e1v_A 76 FYPFVGKLVVYPAPTKKPEICYVEGDSVAVTFAECNLDLNELTGNHPRNCDKFYDLVPILGESTRLSDCIKIPLFSVQVT 155 (454)
T ss_dssp CGGGGSEEEECSSSSSCCEEEECTTCCEEEEEEEECSCGGGTSSSSCEEGGGGGGGSCCCCCCEECSSCEEEECEEEEEE
T ss_pred ccccceeeeeccCCCCCEEEEECCCCcEEEEEEEeCCCHHHhcCCCCCcchhhhcCCCCCCCcccccccccCceEEEEEE
Confidence 999999996 33 36999999 599999999999999999753 2 3446678888764321 11234599999999
Q ss_pred EEccCcEEEEeeeeeeccchhhHHHHHHHHHHHhc-CCCCCCCcCCccccCCcccCCccCCCCCCCC---CCCCC-----
Q 039563 153 YFHCGGVAVGFNFRHIVADGAAAIGFIKNWAKLNY-SNDDHDINIDVSTKYAVVDCTNIFPPNKEIS---GYSRS----- 223 (472)
Q Consensus 153 ~~~cGGlilg~~~~H~v~Dg~g~~~fl~~wa~~~r-g~~~~~~~~~~~~~~P~~dr~~l~~~~~~~p---~~~~~----- 223 (472)
+|+|||++||+++||.++||.|+.+|+++||++|| |.+. ....++ ..+|.+|| .+..|..+.+ .+...
T Consensus 156 ~f~cgG~~lg~~~~H~v~Dg~~~~~Fl~awa~~~r~g~~~-~~~~~~-~~~P~~dr-~l~~p~~~~~~~~~~~~~~~~~~ 232 (454)
T 2e1v_A 156 LFPNQGIAIGITNHHCLGDASTRFCFLKAWTSIARSGNND-ESFLAN-GTRPLYDR-IIKYPMLDEAYLKRAKVESFNED 232 (454)
T ss_dssp EETTTEEEEEEEECGGGCCHHHHHHHHHHHHHHHHTTSCC-HHHHHH-SCCCBCCC-CCCCHHHHHHHHHHTTCTTHHHH
T ss_pred EecCCcEEEEEEeeeeecchhHHHHHHHHHHHHhccCCCc-cccCCC-CCCCcccc-cCCCCCcchHHHHhhhccccccc
Confidence 99999999999999999999999999999999999 7310 000011 35689999 5532210000 00000
Q ss_pred --ccccccCCceEEEEEEEcHHHHHHHHHHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeEEEEEecC
Q 039563 224 --INEWQRSTECVTKRFRFNGSKIAALRREMIMEKASLNLQYRPSRFEAVCGLIWGALLAMDREKHIDSTSTIATIPVNL 301 (472)
Q Consensus 224 --~~~~~~~~~~~~~~f~fs~~~l~~Lk~~a~~~~~~~~~~~~~St~dal~AllW~~~~~Ar~~~~~~~~~~~l~~~vd~ 301 (472)
+.......++..++|+|++++|++||+++..+.. . ..++|+||+|+||+|+|++||| + ++.+.+.++||+
T Consensus 233 ~~~~~~~~~~~~~~~~f~f~~~~i~~LK~~a~~~~~--~-~~~~St~d~l~A~lWr~~~~Ar---~--~~~~~l~~~vd~ 304 (454)
T 2e1v_A 233 YVTQSLAGPSDKLRATFILTRAVINQLKDRVLAQLP--T-LEYVSSFTVACAYIWSCIAKSR---N--DKLQLFGFPIDR 304 (454)
T ss_dssp CCCCCCCCCCCEEEEEEEECHHHHHHHHHHHHHHCT--T-CSCCCHHHHHHHHHHHHHHHHH---C--CSEEEEEEEEEC
T ss_pred cCcccCCCCCCceEEEEEECHHHHHHHHHHHhhcCC--C-CCcccHHHHHHHHHHHHHhhhc---C--CCceEEEEEecc
Confidence 0000123568899999999999999999975421 1 2589999999999999999998 2 478999999999
Q ss_pred CCCCCCCCCCCcccccccee-eecccccccCCC-CCHHHHHHHHHHHHHhhchHHHhhhccCCcchhhHhhHHHHHHHhh
Q 039563 302 RNRMNPPLPEGCIGNLFHAV-TCTENNEAGDGH-YNKSTLARNVREFTKMVSDDFVRKVYQDGGVVFVNQYKEAVEELLK 379 (472)
Q Consensus 302 R~rl~pplp~~Y~GN~~~~~-~~~~~~~l~~~~-~~l~~vA~~IR~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (472)
|+|++||+|++||||++..+ +.++++||. . .+|+++|.+||+++++++++|+++++.. ...+|++....+
T Consensus 305 R~rl~pplP~~Y~GN~~~~~~~~~~~~el~--~~~~l~~~a~~Ir~ai~~~~~~~~~~~~~~----~~~~~~~~~~~~-- 376 (454)
T 2e1v_A 305 RARMKPPIPTAYFGNCVGGCAAIAKTNLLI--GKEGFITAAKLIGENLHKTLTDYKDGVLKD----DMESFNDLVSEG-- 376 (454)
T ss_dssp GGGSSSCCCTTBCSCCEEEEEEEEEGGGTS--HHHHHHHHHHHHHHHHHHHHHHHHTTCCCC---------CHHHHHC--
T ss_pred hhccCCCCCcccccceeeeEEeecchhhcc--ccccHHHHHHHHHHHHHhhhhhhhHHHHHH----HHHHHHHHHHhh--
Confidence 99999999999999999999 999999988 5 7999999999999999987776665541 022354432221
Q ss_pred cCCCCCCCCCCcceEEEEcCCCCCCcccccCCCcceeeeeee-ecCcEEEEeecCCCC-eEEEEEeCCHhhHHhhhcChh
Q 039563 380 DGTNNNNTTNSVRMFGFSGPIGLQYYGIDFGWGKPLWVTTVM-RLNNVAMLLDTCDGK-GVEAWVGLPINDMSKFEQDLG 457 (472)
Q Consensus 380 ~g~~~~~~~~~~~~~~vssw~~~~~y~~DFG~G~P~~~~~~~-~~~g~~~i~p~~~~~-g~ev~v~L~~~~m~~l~~d~~ 457 (472)
..+. .+++|||.++++|++|||||||+++++.. +.+|.++|+|+++++ |++|.|+|++++|++|++ +
T Consensus 377 --------~~~~-~~~vssw~~~~~y~~DFG~G~P~~v~~~~~~~~g~~~l~p~~~~~ggi~v~v~L~~~~m~~f~~--~ 445 (454)
T 2e1v_A 377 --------MPTT-MTWVSGTPKLRFYDMDFGWGKPKKLETVSIDHNGAISINSCKESNEDLEIGVCISATQMEDFVH--I 445 (454)
T ss_dssp --------CCSE-EEEEECCTTSCGGGCCSSSCSCSEEEEGGGGGSSEEEEEECSSCTTSEEEEEEEEHHHHHHHHH--H
T ss_pred --------cCCc-eEEEecCCCCCcccccccCccceEEEeeeeCCCCeEEEEecCCCCCCEEEEEEECHHHHHHHHH--H
Confidence 2233 59999999999999999999999999877 678999999987755 899999999999999976 6
Q ss_pred ccc
Q 039563 458 ILA 460 (472)
Q Consensus 458 ~~~ 460 (472)
|.+
T Consensus 446 ~~~ 448 (454)
T 2e1v_A 446 FDD 448 (454)
T ss_dssp HHH
T ss_pred HHH
Confidence 654
No 4
>2xr7_A Malonyltransferase; xenobiotics, naphthols; HET: MLC; 3.10A {Nicotiana tabacum}
Probab=100.00 E-value=4.9e-72 Score=581.71 Aligned_cols=414 Identities=19% Similarity=0.315 Sum_probs=326.5
Q ss_pred EEEEeeeeecCCCCCCCCCCcccCCcccccC-CCCCccEEEEecCCCCCCCCCcccccCCchhhHHHHHHHHHHhhcccC
Q 039563 5 LRIISKEIIKPSSPTPHHLKTHKLSLLDQLA-PDIYLPIVLFYDSSSRVDDKTSTATINSTNNISRRLKNSLSKTLTHYY 83 (472)
Q Consensus 5 v~~~~~~~v~p~~~~~~~~~~~~LS~lD~~~-~~~y~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~L~~sL~~~L~~~p 83 (472)
|+++++++|+|+.++++ .++++||+||+.+ ...|++.+|||+.+. ... ...+.++++||+||+++|++||
T Consensus 2 v~v~~~~~V~P~~~~~~-~~~~~LS~lD~~~~~~~~~~~~~~y~~~~----~~~----~~~~~~~~~Lk~sLs~~L~~~~ 72 (453)
T 2xr7_A 2 ASVIEQCQVVPSPGSAT-ELTLPLTYFDHVWLAFHRMRRILFYKLPI----SRP----DFVQTIIPTLKDSLSLTLKYYL 72 (453)
T ss_dssp CEEEEESCCCCCTTCCS-EEEEECCHHHHGGGGSCCEEEEEEEECCC----CSH----HHHHTHHHHHHHHHHHHHTTSG
T ss_pred eEEEEEEEecCCCCCCC-CceECCCHHHhhhhhcCCccEEEEEeCCC----CCc----hhHHHHHHHHHHHHHHHhhhcc
Confidence 89999999999987544 3689999999974 456999999998764 210 0145679999999999999999
Q ss_pred CCCcccccc----CCeeEeeC-CCCeeEEEEEeCcchhcccCC--CChhhhcccCCCCCCCCC--CCCCCceEEEEEEEE
Q 039563 84 PFAGRVLLK----DNYVIDCD-DSGVPVVETLVGSNMFDVLNF--PEMDTLEQLLPFNPNKKH--LSTHDVTVAVQINYF 154 (472)
Q Consensus 84 ~LaGrv~~~----~~~~i~~~-~~gv~f~~a~~~~~~~dl~~~--p~~~~l~~l~P~~~~~~~--~~~~~Pll~vQvt~~ 154 (472)
+|||||+.. ++++|+|+ ++||.|++|+++.+++++... ++...++.|+|..+.... ...+.|++.+|+|+|
T Consensus 73 plAGRl~~~~~~~g~~~i~c~~~~gv~fv~A~~~~~l~~l~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~pll~vQvT~f 152 (453)
T 2xr7_A 73 PLAGNVACPQDWSGYPELRYVTGNSVSVIFSESDMDFNYLIGYHPRNTKDFYHFVPQLAEPKDAPGVQLAPVLAIQVTLF 152 (453)
T ss_dssp GGGSCCEEESSTTCCCEEEEETTCCCEEEEEECCSCHHHHTCSSCCCGGGGGGGSCCCCCCEEETTEEECCCEEEEEEEE
T ss_pred ccCeeEEccCCCCCCEEEEecCCCceEEEEEecCCCHHHhhccCCCChhhhhcCCCCCCCcccccccccCCeEEEEEEEc
Confidence 999998553 26999999 599999999999999999752 234566788887643200 011289999999999
Q ss_pred ccCcEEEEeeeeeeccchhhHHHHHHHHHHHhc-CCCCCCCcCCccccCCcccCCccCCCCCCC-----CCCCCCccc-c
Q 039563 155 HCGGVAVGFNFRHIVADGAAAIGFIKNWAKLNY-SNDDHDINIDVSTKYAVVDCTNIFPPNKEI-----SGYSRSINE-W 227 (472)
Q Consensus 155 ~cGGlilg~~~~H~v~Dg~g~~~fl~~wa~~~r-g~~~~~~~~~~~~~~P~~dr~~l~~~~~~~-----p~~~~~~~~-~ 227 (472)
+|||++||+++||.++||.|+.+|+++||++|| |.+.... ++ ...|++||+.+.+|. ++ ..+...+.. .
T Consensus 153 ~cGG~~lg~~~~H~v~Dg~~~~~Fl~~wa~~~r~G~~~~~~--~~-~~~P~~dr~~l~~p~-~~~~~~~~~~~~~~~~~~ 228 (453)
T 2xr7_A 153 PNHGISIGFTNHHVAGDGATIVKFVRAWALLNKFGGDEQFL--AN-EFIPFYDRSVIKDPN-GVGMSIWNEMKKYKHMMK 228 (453)
T ss_dssp TTTEEEEEEEECTTTCCSHHHHHHHHHHHHHHHTTTCGGGS--CG-GGSCBCCCSSSCCSS-CHHHHTTTTGGGCTTTSC
T ss_pred cCCcEEEEEeeeeeeechhHHHHHHHHHHHHhhcCCCcccC--CC-CCCCccccccccCCC-CcchHHHHhccccCCccc
Confidence 999999999999999999999999999999999 7311000 12 457899998877554 21 111000000 0
Q ss_pred ----ccCCceEEEEEEEcHHHHHHHHHHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHhhhccc--C-CCCCeeEEEEEec
Q 039563 228 ----QRSTECVTKRFRFNGSKIAALRREMIMEKASLNLQYRPSRFEAVCGLIWGALLAMDREK--H-IDSTSTIATIPVN 300 (472)
Q Consensus 228 ----~~~~~~~~~~f~fs~~~l~~Lk~~a~~~~~~~~~~~~~St~dal~AllW~~~~~Ar~~~--~-~~~~~~~l~~~vd 300 (472)
....++..++|+|++++|++||+.+..+. .. ..++|+||+|+|++|+|++|||... . ++++.+.+.++||
T Consensus 229 ~~~~~~~~~~~~~~f~f~~~~i~~Lk~~a~~~~--~~-~~~~St~~~l~A~lW~~~~~Ar~~~~~~~~~~~~~~l~~~vd 305 (453)
T 2xr7_A 229 MSDVVTPPDKVRGTFIITRHDIGKLKNLVLTRR--PK-LTHVTSFTVTCAYVWTCIIKSEAATGEEIDENGMEFFGCAAD 305 (453)
T ss_dssp CSCCCCCCSCCCEEEEECHHHHHHHHHHHHHHS--CC-CSCCCHHHHHHHHHHHHHHHHHHHTTCCCCTTSEEEEEEECC
T ss_pred cccccCCCCceEEEEEECHHHHHHHHHHHhhcC--CC-CCcccHHHHHHHHHHHHHHHHhccccccCCCCcceEEEEEec
Confidence 12356779999999999999999998542 11 2589999999999999999999752 1 2357899999999
Q ss_pred CCCCCCCCCCCCcccccccee-eecccccccCCC-CCHHHHHHHHHHHHHh--hchH-HHhhhccCCcchhhHhhHHHHH
Q 039563 301 LRNRMNPPLPEGCIGNLFHAV-TCTENNEAGDGH-YNKSTLARNVREFTKM--VSDD-FVRKVYQDGGVVFVNQYKEAVE 375 (472)
Q Consensus 301 ~R~rl~pplp~~Y~GN~~~~~-~~~~~~~l~~~~-~~l~~vA~~IR~ai~~--~~~~-~~~~~~~~~~~~~~~~~~~~~~ 375 (472)
+|+|++||+|++||||++..+ +.++++||. . .+|+++|.+||+++++ ++++ |+++ + |++..+
T Consensus 306 ~R~rl~pplP~~Y~GN~~~~~~~~~~~~el~--~~~~l~~~a~~Ir~ai~~~~~~~e~~~~~--~---------~~~~~~ 372 (453)
T 2xr7_A 306 CRAQFNPPLPPSYFGNALVGYVARTRQVDLA--GKEGFTIAVELIGEAIRKRMKDEEWILSG--S---------WFKEYD 372 (453)
T ss_dssp TTSCSSSCCCTTBCSCCCCEEEEEEEHHHHT--SSSHHHHHHHHHHHHHTTSSSCHHHHHSS--C---------TTSCCC
T ss_pred ccccCCCCCCcccccceeeeeeeeeeHHHhc--CcchHHHHHHHHHHHHHhhccCCccchhh--H---------HHHHHH
Confidence 999999999999999999999 999999988 5 7999999999999999 5777 8987 5 222111
Q ss_pred HHhhcCCCCCCCCCCcceEEEEcCCCCCCcccccCCCcceeeeeee-ecCc--EEEEeecCCCC-eEEEEEeCCHhhHHh
Q 039563 376 ELLKDGTNNNNTTNSVRMFGFSGPIGLQYYGIDFGWGKPLWVTTVM-RLNN--VAMLLDTCDGK-GVEAWVGLPINDMSK 451 (472)
Q Consensus 376 ~~~~~g~~~~~~~~~~~~~~vssw~~~~~y~~DFG~G~P~~~~~~~-~~~g--~~~i~p~~~~~-g~ev~v~L~~~~m~~ 451 (472)
.+ ..+ ..+++|||.+|++|++|||||+|+++++.. +.+| .++|+|+++++ |++|.|+|++++|++
T Consensus 373 ~~----------~~~-~~~~vssw~~~~~y~~DFG~G~P~~v~~~~~~~~g~~~~~l~~~~~~~ggi~v~v~L~~~~m~~ 441 (453)
T 2xr7_A 373 KV----------DAK-RSLSVAGSPKLDLYAADFGWGRPEKLEFVSIDNDDGISMSLSKSKDSDGDLEIGLSLSKTRMNA 441 (453)
T ss_dssp CS----------CGG-GEEEECSCSSCCGGGCCCSSCSCSEEEEGGGSSCSSCEEEEEECSSSTTCEEEEECCCHHHHHH
T ss_pred hh----------ccC-CcEEEeccccCCccccccCCCcceEEEeeeecCCCceEEEEeecCCCCCCEEEEEEeCHHHHHH
Confidence 11 222 359999999999999999999999999876 6678 88899877655 899999999999999
Q ss_pred hhcChhccc
Q 039563 452 FEQDLGILA 460 (472)
Q Consensus 452 l~~d~~~~~ 460 (472)
|++ +|.+
T Consensus 442 f~~--~~~~ 448 (453)
T 2xr7_A 442 FAA--MFTH 448 (453)
T ss_dssp HHH--HHHH
T ss_pred HHH--HHHH
Confidence 976 6654
No 5
>2rkv_A Trichothecene 3-O-acetyltransferase; BAHD superfamily, deoxyniv T-2, acetyl COA, fusarium; HET: COA MPO ZBA; 1.60A {Gibberella zeae} PDB: 3b2s_A* 3b30_A* 2rkt_A* 2zba_A*
Probab=100.00 E-value=1.9e-65 Score=532.05 Aligned_cols=405 Identities=17% Similarity=0.152 Sum_probs=305.3
Q ss_pred ccCCcccccC--CCCCccEEEEecCCCCCCCCCcccccCCchhhHHHHHHHHHHhhcccCCCCcccccc-------CCee
Q 039563 26 HKLSLLDQLA--PDIYLPIVLFYDSSSRVDDKTSTATINSTNNISRRLKNSLSKTLTHYYPFAGRVLLK-------DNYV 96 (472)
Q Consensus 26 ~~LS~lD~~~--~~~y~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~L~~sL~~~L~~~p~LaGrv~~~-------~~~~ 96 (472)
++||.|||+. ++.|++.+|||+.++ . .+...++++||+||+++|++||+|||||+.. ++++
T Consensus 5 ~~Ls~lD~~~~~~~~y~~~~~~y~~~~----~------~~~~~~~~~Lk~sLs~~L~~~~plAGRl~~~~~~~~~~g~~~ 74 (451)
T 2rkv_A 5 IQLDTLGQLPGLLSIYTQISLLYPVSD----S------SQYPTIVSTFEQGLKRFSEAVPWVAGQVKAEGISEGNTGTSF 74 (451)
T ss_dssp EECCGGGGCTTGGGCEEEEEEEEECSC----G------GGHHHHHHHHHHHHHHHHHHSGGGGCEEEEESCBTTBCCEEE
T ss_pred ccCChhhcCccccccceeEEEEEECCC----C------CCHHHHHHHHHHHHHHHHHhCCceeEEEEECCCCCCCCCcEE
Confidence 6999999987 689999999999654 2 1345789999999999999999999998553 2478
Q ss_pred EeeCCCCeeEEEEEeCc-----chhcccC--CCChhhhc--ccCCCCCCC----CCCCCCCceEEEEEEEEccCcEEEEe
Q 039563 97 IDCDDSGVPVVETLVGS-----NMFDVLN--FPEMDTLE--QLLPFNPNK----KHLSTHDVTVAVQINYFHCGGVAVGF 163 (472)
Q Consensus 97 i~~~~~gv~f~~a~~~~-----~~~dl~~--~p~~~~l~--~l~P~~~~~----~~~~~~~Pll~vQvt~~~cGGlilg~ 163 (472)
|+|++++..|++++++. +++++.. .|. ..+. .|.|..... .....+.|++.+|+|+| |||++||+
T Consensus 75 i~~~~~~~~~~va~~~~d~~~p~~~~l~~~~~p~-~~~~~~~~~p~~~~p~~~~~~~~~~~pll~vQvT~~-~GG~~lg~ 152 (451)
T 2rkv_A 75 IVPFEDVPRVVVKDLRDDPSAPTIEGMRKAGYPM-AMFDENIIAPRKTLPIGPGTGPDDPKPVILLQLNFI-KGGLILTV 152 (451)
T ss_dssp EECCCSSCEEEEEECTTCTTSCBHHHHHHHTSCG-GGSBHHHHCSSCSSSCSTTCSTTSCCBSEEEEEEEE-BTEEEEEE
T ss_pred EeecCCCCeEEEEeCCCCCCCCCHHHHHHcCCCh-hhcCHhhcCCcccCCCCcccCCCCCCceEEEEEEEe-cCceeeee
Confidence 98877676699888764 5777653 232 1121 233432110 01234589999999966 79999999
Q ss_pred eeeeeccchhhHHHHHHHHHHHhcCCCCCCCcCCc-cccCCcccCCccCCCC------C--CCCCCCCCcc---ccccCC
Q 039563 164 NFRHIVADGAAAIGFIKNWAKLNYSNDDHDINIDV-STKYAVVDCTNIFPPN------K--EISGYSRSIN---EWQRST 231 (472)
Q Consensus 164 ~~~H~v~Dg~g~~~fl~~wa~~~rg~~~~~~~~~~-~~~~P~~dr~~l~~~~------~--~~p~~~~~~~---~~~~~~ 231 (472)
++||.++||.|+.+||++||++|||.. . .. ...+|++||+.+.+.. . +.+.+...+. ......
T Consensus 153 ~~~H~v~Dg~g~~~Fl~awa~~~rg~~--~---~~~~~~~p~~dr~~~~p~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 227 (451)
T 2rkv_A 153 NGQHGAMDMVGQDAVIRLLSKACRNDP--F---TEEEMTAMNLDRKTIVPYLENYTIGPEVDHQIVKADVAGGDAVLTPV 227 (451)
T ss_dssp EEETTTCCHHHHHHHHHHHHHHHHTCC--C---CHHHHHHTTCCSTTSSCCCTTCCCCGGGTTCBCCTTSCC-------C
T ss_pred eehhccccHHHHHHHHHHHHHHhcCCC--C---CccccccccCchhhccccccccCCCccccccccCCCCCCCCCCCCCC
Confidence 999999999999999999999999941 1 10 0135788887554321 0 1111221111 112345
Q ss_pred ceEEEEEEEcHHHHHHHHHHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeEEEEEecCCCCCCCCCCC
Q 039563 232 ECVTKRFRFNGSKIAALRREMIMEKASLNLQYRPSRFEAVCGLIWGALLAMDREKHIDSTSTIATIPVNLRNRMNPPLPE 311 (472)
Q Consensus 232 ~~~~~~f~fs~~~l~~Lk~~a~~~~~~~~~~~~~St~dal~AllW~~~~~Ar~~~~~~~~~~~l~~~vd~R~rl~pplp~ 311 (472)
++..++|+|++++|++||+++..+... . ..++|+||+|+||+|+|++|||....++++.+.+.++||+|+|++ +|.
T Consensus 228 ~~~~~~f~f~~~~i~~LK~~a~~~~~~-~-~~~~St~d~l~A~~Wr~~~~Ar~~~~~~~~~~~l~~~vd~R~rl~--lP~ 303 (451)
T 2rkv_A 228 SASWAFFTFSPKAMSELKDAATKTLDA-S-TKFVSTDDALSAFIWKSASRVRLERIDGSAPTEFCRAVDARPAMG--VSN 303 (451)
T ss_dssp CEEEEEEEECHHHHHHHHHHHHTTCCT-T-CSCCCHHHHHHHHHHHHHHHHHTTTSCTTSEEEEEEEEECHHHHT--CCT
T ss_pred CceEEEEEECHHHHHHHHHHHhhhccC-C-CCCccHHHHHHHHHHHHHHHHHhccCCCCCceEEEEEecccccCC--CCC
Confidence 688999999999999999999843210 1 357999999999999999999832123357899999999999998 899
Q ss_pred Ccccccccee-eecccccccCCCCCHHHHHHHHHHHHHhhchHH-HhhhccCCcchhhHhhHHHHHHHhhcCCCCCCCCC
Q 039563 312 GCIGNLFHAV-TCTENNEAGDGHYNKSTLARNVREFTKMVSDDF-VRKVYQDGGVVFVNQYKEAVEELLKDGTNNNNTTN 389 (472)
Q Consensus 312 ~Y~GN~~~~~-~~~~~~~l~~~~~~l~~vA~~IR~ai~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 389 (472)
+||||++..+ +.++++||. +.+|+++|.+||+++.+++.+| +++.++ |++..+.....+ ....+..
T Consensus 304 ~y~GN~~~~~~~~~~~~el~--~~~L~~~a~~ir~ai~~~~~~~~~~~~~~---------~~~~~~~~~~~~-~~~~~~~ 371 (451)
T 2rkv_A 304 NYPGLLQNMTYHNSTIGEIA--NESLGATASRLRSELDPASMRQRTRGLAT---------YLHNNPDKSNVS-LTADADP 371 (451)
T ss_dssp TCCSCCEEEEEEEEEHHHHH--HSCHHHHHHHHHTTCCHHHHHHHHHHHHH---------HHHHCSCCTTBC-TTTTCCT
T ss_pred CCcccceeeecccCcHHHhc--cchHHHHHHHHHHHhcccCchhHHHHHHH---------HHhcCCCccccc-cccccCC
Confidence 9999999999 888999998 8999999999999999999888 988876 544321110000 0000112
Q ss_pred CcceEEEEcCCCCCCcccccC--CCcceeeeeee--ecCcEEEEeecCCCCeEEEEEeCCHhhHHhhhcChhccccccC
Q 039563 390 SVRMFGFSGPIGLQYYGIDFG--WGKPLWVTTVM--RLNNVAMLLDTCDGKGVEAWVGLPINDMSKFEQDLGILAYASF 464 (472)
Q Consensus 390 ~~~~~~vssw~~~~~y~~DFG--~G~P~~~~~~~--~~~g~~~i~p~~~~~g~ev~v~L~~~~m~~l~~d~~~~~~~~~ 464 (472)
+.+ +++|||.++++|++||| ||+|++++.+. +.+|.++++|++.+||++|.|||++++|++|++|+||++|+++
T Consensus 372 ~~~-~~~ssw~~~~~y~~DFG~gwG~P~~v~~~~~~~~~g~~~~~p~~~~ggi~v~v~L~~~~m~~f~~d~ef~~~~~~ 449 (451)
T 2rkv_A 372 STS-VMLSSWAKVGLWDYDFGLGLGKPETVRRPIFEPVESLMYFMPKKPDGEFCAALSLRDEDMDRLKADKEWTKYAQY 449 (451)
T ss_dssp TTC-EEEEECTTCCGGGCCTTCSSCSCSEEECCBCSCCTTEEEECCCCTTSCEEEEEEEEHHHHHHHHHCHHHHTTCEE
T ss_pred CCC-EEEeccccCCccccccCCCCCCceEEEcCCccCCCCEEEEecCCCCCCEEEEEEeCHHHHHHHhcCHHHHhhhee
Confidence 334 99999999999999998 79999998665 4689999998766668999999999999999999999999875
No 6
>1q9j_A PAPA5, polyketide synthase associated protein 5; conjugating enzyme PAPA5, structural genomics, PSI protein structure initiative; 2.75A {Mycobacterium tuberculosis} SCOP: c.43.1.2 c.43.1.2
Probab=98.91 E-value=1.3e-07 Score=95.85 Aligned_cols=280 Identities=13% Similarity=0.007 Sum_probs=157.4
Q ss_pred CcccCCcccccCC-CCCccEEEEecCCCCCCCCCcccccCCchhhHHHHHHHHHHhhcccCCCCccccccCCeeEeeCCC
Q 039563 24 KTHKLSLLDQLAP-DIYLPIVLFYDSSSRVDDKTSTATINSTNNISRRLKNSLSKTLTHYYPFAGRVLLKDNYVIDCDDS 102 (472)
Q Consensus 24 ~~~~LS~lD~~~~-~~y~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~L~~sL~~~L~~~p~LaGrv~~~~~~~i~~~~~ 102 (472)
..+|||++.+.+. ..| ...+.|.... . ...+.|++++.+++..+|.|-.++...++ .
T Consensus 6 ~~~pls~~Q~~~~~~~y-~~~~~~~l~g----~----------ld~~~l~~A~~~lv~rh~~LRt~f~~~~~-------~ 63 (422)
T 1q9j_A 6 VIRKLSHSEEVFAQYEV-FTSMTIQLRG----V----------IDVDALSDAFDALLETHPVLASHLEQSSD-------G 63 (422)
T ss_dssp EEEECCHHHHHHHHTTC-EEEEEEEEES----C----------CCHHHHHHHHHHHHHHCGGGSEEEEECTT-------S
T ss_pred eeecCCHHHHHHHhcCc-eEEEEEEEec----C----------CCHHHHHHHHHHHHHhCccceEEEEecCC-------c
Confidence 4689999987432 222 2333444333 1 13789999999999999999877632221 1
Q ss_pred CeeEEEEEeC---cchhcccCCCChhhhcccCCCCCCCCCCCCCCceEEEEEEEEccCcEEEEeeeeeeccchhhHHHHH
Q 039563 103 GVPVVETLVG---SNMFDVLNFPEMDTLEQLLPFNPNKKHLSTHDVTVAVQINYFHCGGVAVGFNFRHIVADGAAAIGFI 179 (472)
Q Consensus 103 gv~f~~a~~~---~~~~dl~~~p~~~~l~~l~P~~~~~~~~~~~~Pll~vQvt~~~cGGlilg~~~~H~v~Dg~g~~~fl 179 (472)
.+..+..... ..+.|+........+.. .. .. .+ ...|++++.+.. ..++..|.+.+||+++||.|+..|+
T Consensus 64 ~~q~v~~~~~~~~~~~~d~~~~~~~~~~~~---~~-~~-~d-~~~pl~r~~l~~-~~~~~~l~l~~hH~i~Dg~S~~~l~ 136 (422)
T 1q9j_A 64 GWNLVADDLLHSGICVIDGTAATNGSPSGN---AE-LR-LD-QSVSLLHLQLIL-REGGAELTLYLHHCMADGHHGAVLV 136 (422)
T ss_dssp SEEEEECCSSSCCCEEEC---------------CC-CC-CC-TTTCSEEEEEEC-CSSSCEEEEEEEGGGCCHHHHHHHH
T ss_pred ceeeeccCCCCCceEEEECCCCCcchhhhc---cc-Cc-cC-CCCCcEEEEEEe-cCCCeEEEEEeceEEEchhhHHHHH
Confidence 1111111111 11122221111111110 00 00 12 467899888877 6788999999999999999999999
Q ss_pred HHHHHHhcCCC--CCCCcCCccccCCccc--------CCccC--CCCC--CCCCCCC--------Ccc--ccccCCceEE
Q 039563 180 KNWAKLNYSND--DHDINIDVSTKYAVVD--------CTNIF--PPNK--EISGYSR--------SIN--EWQRSTECVT 235 (472)
Q Consensus 180 ~~wa~~~rg~~--~~~~~~~~~~~~P~~d--------r~~l~--~~~~--~~p~~~~--------~~~--~~~~~~~~~~ 235 (472)
+.|.+.+++.. +... .. ...+.-+ +.... .+.. ..-.|+. .|. ..........
T Consensus 137 ~~l~~~Y~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~l~~~~~lp~~~~~~~~~~~~~ 213 (422)
T 1q9j_A 137 DELFSRYTDAVTTGDPG--PI-TPQPTPLSMEAVLAQRGIRKQGLSGAERFMSVMYAYEIPATETPAVLAHPGLPQAVPV 213 (422)
T ss_dssp HHHHHHHHHHHHSSSCC--CC-CCCCCCBCHHHHHHHSSCCC-----CTTSSTTTTCC-------------CCSBCCCCE
T ss_pred HHHHHHHHHhhccCCCC--CC-CCCCCCCCHHHHHHhcCCcccccchhhhhhhhhhcccCCCcccCCCCCCCCCCCCccc
Confidence 99999987310 0110 11 0111111 10000 0000 0011211 010 0111222456
Q ss_pred EEEEEcHHHHHHHHHHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeEEEEEecCCCCCCCCCCCCccc
Q 039563 236 KRFRFNGSKIAALRREMIMEKASLNLQYRPSRFEAVCGLIWGALLAMDREKHIDSTSTIATIPVNLRNRMNPPLPEGCIG 315 (472)
Q Consensus 236 ~~f~fs~~~l~~Lk~~a~~~~~~~~~~~~~St~dal~AllW~~~~~Ar~~~~~~~~~~~l~~~vd~R~rl~pplp~~Y~G 315 (472)
..+.++.+..++|++.|. ...+|.+.++.|.+-..+.|-+.. + .....+.+++++|....|+++..=+.
T Consensus 214 ~~~~l~~~~~~~l~~~a~--------~~~~t~~~~l~aa~~~~l~r~~~~--~-~~~v~~g~~~~~R~~~~~~~~~~~~~ 282 (422)
T 1q9j_A 214 TRLWLSKQQTSDLMAFGR--------EHRLSLNAVVAAAILLTEWQLRNT--P-HVPIPYVYPVDLRFVLAPPVAPTEAT 282 (422)
T ss_dssp EEECCCHHHHHHHHHHHT--------TTTCCHHHHHHHHHHHHHHHHHTC--S-SCCEEEEEEEETTTTSSSCCCTTTBS
T ss_pred eEEEeCHHHHHHHHHHHH--------HhCCCHHHHHHHHHHHHHHhcccC--C-CceEEEeeeeecccccCCCCChhhhh
Confidence 888999999999999887 346899999999866666644211 1 24678899999999877655422234
Q ss_pred ccccee-eecccccccCCCCCHHHHHHHHHHHHHhh
Q 039563 316 NLFHAV-TCTENNEAGDGHYNKSTLARNVREFTKMV 350 (472)
Q Consensus 316 N~~~~~-~~~~~~~l~~~~~~l~~vA~~IR~ai~~~ 350 (472)
|.+.+. ..+++.. +.++.+++..+++.+.+.
T Consensus 283 ~~vG~f~n~lp~~~----~~~~~~~l~~v~~~~~~~ 314 (422)
T 1q9j_A 283 NLLGAASYLAEIGP----NTDIVDLASDIVATLRAD 314 (422)
T ss_dssp CCEEEEEEEECCCS----SCCHHHHHHHHHHHHHHH
T ss_pred hhheeeeeeeeccC----CCCHHHHHHHHHHHHHHH
Confidence 555554 4455432 457888888888888764
No 7
>2jgp_A Tyrocidine synthetase 3; multifunctional enzyme, antibiotic biosynthesis, condensatio domain, peptide bond formation, ligase; 1.85A {Brevibacillus brevis}
Probab=98.44 E-value=2.8e-05 Score=81.02 Aligned_cols=244 Identities=9% Similarity=0.019 Sum_probs=143.9
Q ss_pred hHHHHHHHHHHhhcccCCCCccccccCC-e-eEeeCCCCeeEEEEEeCcchhcccCCCChhhhcccCCCCCCCCCCCCCC
Q 039563 67 ISRRLKNSLSKTLTHYYPFAGRVLLKDN-Y-VIDCDDSGVPVVETLVGSNMFDVLNFPEMDTLEQLLPFNPNKKHLSTHD 144 (472)
Q Consensus 67 ~~~~L~~sL~~~L~~~p~LaGrv~~~~~-~-~i~~~~~gv~f~~a~~~~~~~dl~~~p~~~~l~~l~P~~~~~~~~~~~~ 144 (472)
..+.|++++.+++..+|.|--++...++ + .+......+.+...+ .+-+++. .+....-. + .+....
T Consensus 132 d~~~l~~A~~~lv~rh~~LRt~f~~~~~~~~q~v~~~~~~~~~~~~--~~~~~~~------~~~~~~~~-~---fdl~~~ 199 (520)
T 2jgp_A 132 ERTRVEAAFQRLIARHESLRTSFAVVNGEPVQNIHEDVPFALAYSE--VTEEEAR------ELVSSLVQ-P---FDLEVA 199 (520)
T ss_dssp CHHHHHHHHHHHHHHCGGGGEEEEEETTEEEEEECSCCCCCCEEEE--CCHHHHH------HHHHHTCC-C---CCTTSS
T ss_pred CHHHHHHHHHHHHHHhHhheeEEEeeCCEEEEEECCCCCCceEEEe--CCHHHHH------HHHHHhcC-C---CCCCCC
Confidence 3799999999999999999666522222 1 111111111111111 1101110 01111111 1 123356
Q ss_pred ceEEEEEEEEccCcEEEEeeeeeeccchhhHHHHHHHHHHHhcCCCCCCCcCCccccCCccc-----CCc----------
Q 039563 145 VTVAVQINYFHCGGVAVGFNFRHIVADGAAAIGFIKNWAKLNYSNDDHDINIDVSTKYAVVD-----CTN---------- 209 (472)
Q Consensus 145 Pll~vQvt~~~cGGlilg~~~~H~v~Dg~g~~~fl~~wa~~~rg~~~~~~~~~~~~~~P~~d-----r~~---------- 209 (472)
|++++.+-....+...|.+.+||.++||.|+..|++.+.+.+++. .. ++ ...+.-| +..
T Consensus 200 pl~r~~l~~~~~~~~~l~~~~HH~i~Dg~S~~~l~~el~~~Y~~~--~l---~~-~~~~~~d~~~~~~~~~~~~~~~~~~ 273 (520)
T 2jgp_A 200 PLIRVSLLKIGEDRYVLFTDMHHSISDGVSSGILLAEWVQLYQGD--VL---PE-LRIQYKDFAVWQQEFSQSAAFHKQE 273 (520)
T ss_dssp CCEEEEEEEEETTEEEEEEEEBGGGCCHHHHHHHHHHHHHHHTTC--CC---CC-CSCCHHHHHHHHHHHTTSHHHHHHH
T ss_pred cceeEEEEEEcCCcEEEEEEccceeecHhHHHHHHHHHHHHHccC--CC---CC-CCCCHHHHHHHHHHhhcChhhHHHH
Confidence 888888877765778999999999999999999999999999883 11 11 1111111 100
Q ss_pred ------cCC--CCCCCCCCCCCccccccCCceEEEEEEEcHHHHHHHHHHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHh
Q 039563 210 ------IFP--PNKEISGYSRSINEWQRSTECVTKRFRFNGSKIAALRREMIMEKASLNLQYRPSRFEAVCGLIWGALLA 281 (472)
Q Consensus 210 ------l~~--~~~~~p~~~~~~~~~~~~~~~~~~~f~fs~~~l~~Lk~~a~~~~~~~~~~~~~St~dal~AllW~~~~~ 281 (472)
+.. +...+|.-. +.+...........+.++.+..++|++.|.+ ..+|.+.++.|.+-..+.+
T Consensus 274 ~yW~~~l~~~~~~~~lp~~~--~~~~~~~~~~~~~~~~l~~~~~~~l~~~a~~--------~~~T~~~~l~aa~a~~L~~ 343 (520)
T 2jgp_A 274 AYWLQTFADDIPVLNLPTDF--TRPSTQSFAGDQCTIGAGKALTEGLHQLAQA--------TGTTLYMVLLAAYNVLLAK 343 (520)
T ss_dssp HHHHHHTSSCCCCCCCCCSS--CCCSSCCCBEEEEEEECCHHHHHHHHHHHHH--------HTCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHhCCCCCcCCCCCCC--CCCCCCCCCccEEEEeCCHHHHHHHHHHHHH--------cCCCHHHHHHHHHHHHHHH
Confidence 000 000111100 0111122345677889999999999998873 2478899988875555544
Q ss_pred hhcccCCCCCeeEEEEEecCCCCCCCCCCCCcccccccee-eecccccccCCCCCHHHHHHHHHHHHHhh
Q 039563 282 MDREKHIDSTSTIATIPVNLRNRMNPPLPEGCIGNLFHAV-TCTENNEAGDGHYNKSTLARNVREFTKMV 350 (472)
Q Consensus 282 Ar~~~~~~~~~~~l~~~vd~R~rl~pplp~~Y~GN~~~~~-~~~~~~~l~~~~~~l~~vA~~IR~ai~~~ 350 (472)
--+ .+...+.+++++|..- --.+-+|+++... .++.+.. +.++.+++..+++.+.+.
T Consensus 344 ~~~-----~~dv~~g~~~~gR~~~---~~~~~vG~f~n~lplr~~~~~----~~~~~~~l~~v~~~~~~~ 401 (520)
T 2jgp_A 344 YAG-----QEDIIVGTPITGRSHA---DLEPIVGMFVNTLAMRNKPQR----EKTFSEFLQEVKQNALDA 401 (520)
T ss_dssp HHT-----CSCEEEEEEECCCCSG---GGTTCCSCCCEEEEEEECCCT----TSBHHHHHHHHHHHHHHH
T ss_pred hcC-----CCCeEEEeccCCCCch---hhhccEEeeeeeeeEEecCCC----CCCHHHHHHHHHHHHHHH
Confidence 322 2457899999999752 2346678777766 6665543 568888988888887654
No 8
>1l5a_A Amide synthase, VIBH; nonribosomal peptide synthetase, NRPS condensation domain, vibriobactin, biosynthetic protein; 2.55A {Vibrio cholerae} SCOP: c.43.1.2 c.43.1.2
Probab=98.36 E-value=3.7e-05 Score=77.99 Aligned_cols=246 Identities=11% Similarity=0.022 Sum_probs=143.5
Q ss_pred hHHHHHHHHHHhhcccCCCCccccccCCeeEeeCCCCeeEEEEEeCcchhcccCCCCh-hhhcc----cCCCCCCCCCCC
Q 039563 67 ISRRLKNSLSKTLTHYYPFAGRVLLKDNYVIDCDDSGVPVVETLVGSNMFDVLNFPEM-DTLEQ----LLPFNPNKKHLS 141 (472)
Q Consensus 67 ~~~~L~~sL~~~L~~~p~LaGrv~~~~~~~i~~~~~gv~f~~a~~~~~~~dl~~~p~~-~~l~~----l~P~~~~~~~~~ 141 (472)
..+.|++++.+++..+|.|--++...++ .+. ....+. ..+.|+...++. ..+.. ..-. + .+.
T Consensus 34 d~~~L~~A~~~lv~rh~~LRt~f~~~~~-~v~-~~~~~~-------~~~~d~~~~~~~~~~~~~~~~~~~~~-~---fdl 100 (436)
T 1l5a_A 34 DTTLLLRALHLTVSEIDLFRARFSAQGE-LYW-HPFSPP-------IDYQDLSIHLEAEPLAWRQIEQDLQR-S---STL 100 (436)
T ss_dssp CHHHHHHHHHHHHHTCGGGGEEECTTCC-EEE-CSSCCC-------CEEEECTTCTTHHHHHHHHHHHHHTS-C---CCC
T ss_pred CHHHHHHHHHHHHHHhheeEEEEEecCC-eEC-CCcCCC-------ccEEeCCCCCCHHHHHHHHHHHHhcC-C---CCc
Confidence 3789999999999999999777522233 111 111111 112222221111 11111 1111 1 123
Q ss_pred CCCceEEEEEEEEccCcEEEEeeeeeeccchhhHHHHHHHHHHHhcCCC-CCCCcCCccccC-Cccc-----CCccCCCC
Q 039563 142 THDVTVAVQINYFHCGGVAVGFNFRHIVADGAAAIGFIKNWAKLNYSND-DHDINIDVSTKY-AVVD-----CTNIFPPN 214 (472)
Q Consensus 142 ~~~Pll~vQvt~~~cGGlilg~~~~H~v~Dg~g~~~fl~~wa~~~rg~~-~~~~~~~~~~~~-P~~d-----r~~l~~~~ 214 (472)
...|++++.+-....+...|.+.+||+++||.|+..|++.+.+.+.+.. +. ++.... +.-| +..+....
T Consensus 101 ~~~pl~r~~l~~~~~~~~~l~~~~HH~i~Dg~S~~~l~~~l~~~Y~~~~~g~----~~~~~~~~~~~~~~~~~~~~~~~~ 176 (436)
T 1l5a_A 101 IDAPITSHQVYRLSHSEHLIYTRAHHIVLDGYGMMLFEQRLSQHYQSLLSGQ----TPTAAFKPYQSYLEEEAAYLTSHR 176 (436)
T ss_dssp BTSCSCEEEEEEEETTEEEEEEEEETTTCCHHHHHHHHHHHHHHHHHHHHTC----CCCCCCCCHHHHHHHHHHHHTSHH
T ss_pred CCCCCeEEEEEEEcCCEEEEEEeehhheecHhHHHHHHHHHHHHHHHHhcCC----CCCCCccCHHHHHHHHHHhhccHh
Confidence 3568888887777657899999999999999999999999999987310 01 110111 1100 00000000
Q ss_pred C------------CCCCCCCCccc-cccCCceEEEEEEEcHHHHHHHHHHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHh
Q 039563 215 K------------EISGYSRSINE-WQRSTECVTKRFRFNGSKIAALRREMIMEKASLNLQYRPSRFEAVCGLIWGALLA 281 (472)
Q Consensus 215 ~------------~~p~~~~~~~~-~~~~~~~~~~~f~fs~~~l~~Lk~~a~~~~~~~~~~~~~St~dal~AllW~~~~~ 281 (472)
. +.|.....|.. ...........+.++.+..++|++.|.+ ..+|.+.++.|.+-..+.+
T Consensus 177 ~~~~~~~W~~~l~~~~~~~~lp~~~~~~~~~~~~~~~~l~~~~~~~l~~~a~~--------~~~t~~~~l~aa~~~~L~~ 248 (436)
T 1l5a_A 177 YWQDKQFWQGYLREAPDLTLTSATYDPQLSHAVSLSYTLNSQLNHLLLKLANA--------NQIGWPDALVALCALYLES 248 (436)
T ss_dssp HHHHHHHHHHHHHTSCCCCBCCTTCCGGGCCEEEEEEECCHHHHHHHHHHHHH--------TTCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCCcccCCCCCCCCcccceeeEEecCHHHHHHHHHHHHH--------hCCCHHHHHHHHHHHHHHH
Confidence 0 11100000110 1112334578889999999999998872 3588999998875544444
Q ss_pred hhcccCCCCCeeEEEEEecCCCCCCCCCCCCcccccccee-eecccccccCCCCCHHHHHHHHHHHHHhh
Q 039563 282 MDREKHIDSTSTIATIPVNLRNRMNPPLPEGCIGNLFHAV-TCTENNEAGDGHYNKSTLARNVREFTKMV 350 (472)
Q Consensus 282 Ar~~~~~~~~~~~l~~~vd~R~rl~pplp~~Y~GN~~~~~-~~~~~~~l~~~~~~l~~vA~~IR~ai~~~ 350 (472)
-- + +...+.+++++|.. + --.+-+|+++-.. .++.... ..++.+++..+++.+.+.
T Consensus 249 ~~----g--~dv~ig~~~~~R~~--~-~~~~~vG~f~n~lplr~~~~~----~~t~~~~l~~v~~~~~~~ 305 (436)
T 1l5a_A 249 AE----P--DAPWLWLPFMNRWG--S-VAANVPGLMVNSLPLLRLSAQ----QTSLGNYLKQSGQAIRSL 305 (436)
T ss_dssp HS----T--TCCEEEEEECCCTT--S-GGGGSCSCCCEEEEEECCCCT----TCBHHHHHHHHHHHHHHH
T ss_pred hh----C--CceEEeeecccCCC--h-HHhcCcceEEEEEEEEEecCC----CCCHHHHHHHHHHHHHHH
Confidence 32 1 35788999999965 1 2346667777666 6665543 568999999999888764
No 9
>4hvm_A Tlmii; PSI-biology, midwest center for structural genomics, MCSG, N product biosynthesis, natPro; 2.70A {Streptoalloteichus hindustanus}
Probab=98.23 E-value=2.6e-05 Score=80.62 Aligned_cols=275 Identities=13% Similarity=0.024 Sum_probs=153.9
Q ss_pred CcccCCccccc-------CCCCCccEEEEecCCCCCCCCCcccccCCchhhHHHHHHHHHHhhcccCCCCccccccCC-e
Q 039563 24 KTHKLSLLDQL-------APDIYLPIVLFYDSSSRVDDKTSTATINSTNNISRRLKNSLSKTLTHYYPFAGRVLLKDN-Y 95 (472)
Q Consensus 24 ~~~~LS~lD~~-------~~~~y~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~L~~sL~~~L~~~p~LaGrv~~~~~-~ 95 (472)
..+|||++-+. .+.......+.|+.+. . ...++|++++.+++..+|.|--++...++ .
T Consensus 12 ~~~Pls~~Q~~~~~~~~~~~~~~y~~~~~~~l~g----~----------ld~~~L~~A~~~lv~rh~~LRt~f~~~~~~~ 77 (493)
T 4hvm_A 12 GLRRASFLQRGAWRWLREAPPAAAFAARGLLGSG----R----------IDDDRLAAAADEVLDAFPLLRVNFVDDDGLW 77 (493)
T ss_dssp CEEECCHHHHHHHHHHTTSCGGGGEEEEEEEEES----S----------CCHHHHHHHHHHHHHHCGGGGEEEEESSSEE
T ss_pred CCCCCCHHHHHHHHHHhhCCCCcceeEEEEEEeC----C----------CCHHHHHHHHHHHHHhchhceeEEEccCCEE
Confidence 46899987542 1211133445555544 2 24799999999999999999666522222 2
Q ss_pred eEeeCCCCeeEEEEEeCcchhcccCCCCh-hhhcc----cCCCCCCCCCCCCCCceEEEEEEEEccCcEEEEeeeeeecc
Q 039563 96 VIDCDDSGVPVVETLVGSNMFDVLNFPEM-DTLEQ----LLPFNPNKKHLSTHDVTVAVQINYFHCGGVAVGFNFRHIVA 170 (472)
Q Consensus 96 ~i~~~~~gv~f~~a~~~~~~~dl~~~p~~-~~l~~----l~P~~~~~~~~~~~~Pll~vQvt~~~cGGlilg~~~~H~v~ 170 (472)
. ......+.+.+. |+...++. ..+.. ..-.. .+....|++++.+-....+...|.+.+||+++
T Consensus 78 ~-~v~~~~~~~~~~-------d~~~~~~~~~~~~~~~~~~~~~~----fdl~~~pl~r~~l~~~~~~~~~l~l~~HH~i~ 145 (493)
T 4hvm_A 78 M-RTRENADALVRS-------DLRGHPDPQARCVELLRADRDRP----TDPERDPLVRLHLVRLSETDVVLGVVAHQMLL 145 (493)
T ss_dssp E-EECSCCCCEEEE-------ECTTSSSHHHHHHHHHHHHHSSC----CCTTTSCSEEEEEEECSSSEEEEEEEEETTTC
T ss_pred E-EecCCCCCceEE-------ECCCCCchHHHHHHHHHHHhcCC----CCCCCCCeEEEEEEEECCCcEEEEEecchhhc
Confidence 2 211111322221 22221111 11111 11111 12235688888887777566899999999999
Q ss_pred chhhHHHHHHHHHHHhcCCCCCCCcCCccccCCccc-----CC--ccCCCCC------------CCCCCCCCccccccCC
Q 039563 171 DGAAAIGFIKNWAKLNYSNDDHDINIDVSTKYAVVD-----CT--NIFPPNK------------EISGYSRSINEWQRST 231 (472)
Q Consensus 171 Dg~g~~~fl~~wa~~~rg~~~~~~~~~~~~~~P~~d-----r~--~l~~~~~------------~~p~~~~~~~~~~~~~ 231 (472)
||.|+..|++.+.+.+.|. .+ . .+..| +. .+..+.. +.+... .......
T Consensus 146 Dg~S~~~l~~~l~~~Y~g~-------~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~l~~~~~l~---~~~~~~~ 213 (493)
T 4hvm_A 146 DARSRYMVLGAVWQAYYGR-------FR-P-AQYRDFAEVADFHPLDRETVRVARHRWWSRRLPALPVRG---GDGGPVG 213 (493)
T ss_dssp CHHHHHHHHHHHHHHHTTC-------CC-G-GGSBCGGGTTTCCTTCSHHHHHHHHHHHHHHGGGSCCCC----------
T ss_pred cHHHHHHHHHHHHHHhCCC-------CC-C-cCHHHHHHHHhhhhcccChhhHHHHHHHHHhccCCCCCC---CCCCCCC
Confidence 9999999999999999773 22 1 11111 11 0100000 011100 0000111
Q ss_pred ceEEEEEEEcHHHHHHHHHHHHHhhhcCCCCCCCC--HHHHHHHHHHHHHHhhhcc-----c--CCCCCeeEEEEEecCC
Q 039563 232 ECVTKRFRFNGSKIAALRREMIMEKASLNLQYRPS--RFEAVCGLIWGALLAMDRE-----K--HIDSTSTIATIPVNLR 302 (472)
Q Consensus 232 ~~~~~~f~fs~~~l~~Lk~~a~~~~~~~~~~~~~S--t~dal~AllW~~~~~Ar~~-----~--~~~~~~~~l~~~vd~R 302 (472)
......+.++.+..++|++.|. ...+| .+.++.|.+-..+.+-+.. . .+ .....+.+++++|
T Consensus 214 ~~~~~~~~l~~~~~~~l~~~a~--------~~~vt~~~~~~l~aa~a~~L~~~~~~~~~~~~~~~g-~~dv~~g~~~~gR 284 (493)
T 4hvm_A 214 PPETSRLRVPGSRWQALTEPGG--------PLGGNGSLAMAALTAWWLWTQGAGTGTDTGAGTGTG-KDSLYLSTEVDLR 284 (493)
T ss_dssp CCEEEEEEEEHHHHHHHHCC--------------CHHHHHHHHHHHHHHHC-----------------CEEEEEEEEEHH
T ss_pred CCeeEEEEcCHHHHHHHHHHHH--------HcCCCchHHHHHHHHHHHHHHHhhhcccccccCcCC-CCCEEEEeeccCC
Confidence 2667888999999999998776 23578 9999988765555444110 0 11 3568899999999
Q ss_pred CCCCCCCCCCcccccccee-eecccccccCCCCCHHHHHHHHHHHHHhh
Q 039563 303 NRMNPPLPEGCIGNLFHAV-TCTENNEAGDGHYNKSTLARNVREFTKMV 350 (472)
Q Consensus 303 ~rl~pplp~~Y~GN~~~~~-~~~~~~~l~~~~~~l~~vA~~IR~ai~~~ 350 (472)
..- --.+.+|+++... .++..+... ..++.+++..+++.+.+.
T Consensus 285 ~~~---~~~~~vG~f~n~lplr~~~~~~~--~~t~~~~l~~v~~~~~~~ 328 (493)
T 4hvm_A 285 DHL---QLGSVVGPLTDRVVFGVDLTGLR--EPSFRDLMSRTQAGFLDA 328 (493)
T ss_dssp HHT---TCCSBCSCCEEEEEEEEECTTCS--SCBHHHHHHHHHHHHHHH
T ss_pred CCc---chhcCeEeeeceeEEEEecCCCc--CCCHHHHHHHHHHHHHHH
Confidence 652 3356778877766 666554321 468888888888877764
No 10
>2vsq_A Surfactin synthetase subunit 3; ligase, peptidyl carrier protein, ligase phosphoprotein, TER module, phosphopantetheine; 2.60A {Bacillus subtilis}
Probab=98.03 E-value=0.00012 Score=84.79 Aligned_cols=251 Identities=11% Similarity=0.040 Sum_probs=144.6
Q ss_pred hHHHHHHHHHHhhcccCCCCccccccC-C--eeEeeCCCCeeEEEEEeCcchhcccCCCCh---hhhcccCC---CCCCC
Q 039563 67 ISRRLKNSLSKTLTHYYPFAGRVLLKD-N--YVIDCDDSGVPVVETLVGSNMFDVLNFPEM---DTLEQLLP---FNPNK 137 (472)
Q Consensus 67 ~~~~L~~sL~~~L~~~p~LaGrv~~~~-~--~~i~~~~~gv~f~~a~~~~~~~dl~~~p~~---~~l~~l~P---~~~~~ 137 (472)
.++.|++++.+++..++.|--++...+ + .++......+.+ .+.|+...+.. ..+..++- ..+
T Consensus 48 d~~~l~~A~~~lv~rH~~LRt~f~~~~~~~p~Q~v~~~~~~~~-------~~~d~~~~~~~~~~~~~~~~~~~~~~~~-- 118 (1304)
T 2vsq_A 48 NIKCLEESMNVIMDRYDVFRTVFIHEKVKRPVQVVLKKRQFHI-------EEIDLTHLTGSEQTAKINEYKEQDKIRG-- 118 (1304)
T ss_dssp CHHHHHHHHHHHHHHCGGGGEEEECSSCSSCEEEEESCCCCCE-------EEEECTTSCHHHHHHHHHHHHHHHHHHC--
T ss_pred CHHHHHHHHHHHHHhhhhceEEEEEcCCCeEEEEECCCCCCce-------EEEECCCCCchhHHHHHHHHHHHHhcCC--
Confidence 379999999999999999966652111 1 111111111111 12233222111 11111110 001
Q ss_pred CCCCCCCceEEEEEEEEccCcEEEEeeeeeeccchhhHHHHHHHHHHHhcCCC-CCCCcCCccccCCccc-----CC---
Q 039563 138 KHLSTHDVTVAVQINYFHCGGVAVGFNFRHIVADGAAAIGFIKNWAKLNYSND-DHDINIDVSTKYAVVD-----CT--- 208 (472)
Q Consensus 138 ~~~~~~~Pll~vQvt~~~cGGlilg~~~~H~v~Dg~g~~~fl~~wa~~~rg~~-~~~~~~~~~~~~P~~d-----r~--- 208 (472)
-+....|++++.+-....+...|-+.+||+++||.|+..|++.+++.+++.. +... ..+..++.-| ++
T Consensus 119 -fdl~~~pl~r~~l~~~~~~~~~l~~~~HHii~DG~S~~~l~~el~~~Y~~~~~g~~~--~l~~~~~y~d~~~~~~~~~~ 195 (1304)
T 2vsq_A 119 -FDLTRDIPMRAAIFKKAEESFEWVWSYHHIILDGWCFGIVVQDLFKVYNALREQKPY--SLPPVKPYKDYIKWLEKQDK 195 (1304)
T ss_dssp -CCTTTSCSEEEEEEEEETTEEEEEEEEEGGGCCHHHHHHHHHHHHHHHHHHHTTCCC--CCCCCCCTHHHHHHHHTSCH
T ss_pred -CCCCCCCcEEEEEEEECCCcEEEEEecCceeechhhHHHHHHHHHHHHHHhhcCCCC--CCCCcccHHHHHHHHhcchh
Confidence 1233568999888888767889999999999999999999999999886510 0100 1101111111 00
Q ss_pred ---------ccCC-CC-CCCCCCCCCccccccCCceEEEEEEEcHHHHHHHHHHHHHhhhcCCCCCCCCHHHHHHHHHHH
Q 039563 209 ---------NIFP-PN-KEISGYSRSINEWQRSTECVTKRFRFNGSKIAALRREMIMEKASLNLQYRPSRFEAVCGLIWG 277 (472)
Q Consensus 209 ---------~l~~-~~-~~~p~~~~~~~~~~~~~~~~~~~f~fs~~~l~~Lk~~a~~~~~~~~~~~~~St~dal~AllW~ 277 (472)
.+.. +. ..+|.. +.............|.++.+..++||+.|.+ ..+|.+.++.|.+-.
T Consensus 196 ~~~~~yW~~~L~~~~~~~~lp~~---~~~~~~~~~~~~~~~~l~~~~~~~L~~~a~~--------~~~T~~~vllaa~a~ 264 (1304)
T 2vsq_A 196 QASLRYWREYLEGFEGQTTFAEQ---RKKQKDGYEPKELLFSPSEAETKAFTELAKS--------QHTTLSTALQAVWSV 264 (1304)
T ss_dssp HHHHHHHHHHHTTCCCCCTTTTT---CCCSSCCCCEEEEEECCCHHHHHHHHHHHHH--------TTCCHHHHHHHHHHH
T ss_pred hHHHHHHHHHhCCCCccccCCCC---CCccccccCcceEEEecCHHHHHHHHHHHHH--------cCCCHHHHHHHHHHH
Confidence 0000 00 011110 0011112234567788999999999999882 357889988886544
Q ss_pred HHHhhhcccCCCCCeeEEEEEecCCCCCCCCCCCCcccccccee-eecccccccCCCCCHHHHHHHHHHHHHhh
Q 039563 278 ALLAMDREKHIDSTSTIATIPVNLRNRMNPPLPEGCIGNLFHAV-TCTENNEAGDGHYNKSTLARNVREFTKMV 350 (472)
Q Consensus 278 ~~~~Ar~~~~~~~~~~~l~~~vd~R~rl~pplp~~Y~GN~~~~~-~~~~~~~l~~~~~~l~~vA~~IR~ai~~~ 350 (472)
.+.|--. .+...+..++++|..-.+.+ ++-+|+.+-.. .++.++. ..++.++...+++...+.
T Consensus 265 ~L~r~tg-----~~dvv~G~pvsgR~~~~~~~-~~~vG~fvntlplr~~~~~----~~s~~~ll~~v~~~~~~a 328 (1304)
T 2vsq_A 265 LISRYQQ-----SGDLAFGTVVSGRPAEIKGV-EHMVGLFINVVPRRVKLSE----GITFNGLLKRLQEQSLQS 328 (1304)
T ss_dssp HHHHHHT-----CSEEEEEEEECCCCTTSTTG-GGCCSSCCEEEEEEEECCT----TCBHHHHHHHHHHHHHHH
T ss_pred HHHHhcC-----CCCEEEEEEeCCCCccchhh-hcccccceeEEEEEecCCC----CCcHHHHHHHHHHHHHHh
Confidence 4443322 24678999999997632222 45567776665 5665543 678999999998887664
No 11
>2xhg_A Tyrocidine synthetase A; isomerase, nonribosomal peptide synthesis, cofactor-independ epimerization; 1.50A {Brevibacillus brevis}
Probab=97.80 E-value=0.0023 Score=65.19 Aligned_cols=279 Identities=9% Similarity=0.004 Sum_probs=158.0
Q ss_pred CcccCCcccccC-----C-CCCccEEEEecCCCCCCCCCcccccCCchhhHHHHHHHHHHhhcccCCCCccccccC-Ce-
Q 039563 24 KTHKLSLLDQLA-----P-DIYLPIVLFYDSSSRVDDKTSTATINSTNNISRRLKNSLSKTLTHYYPFAGRVLLKD-NY- 95 (472)
Q Consensus 24 ~~~~LS~lD~~~-----~-~~y~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~L~~sL~~~L~~~p~LaGrv~~~~-~~- 95 (472)
..++||+..+++ + .......+.|+... . ...+.|+++|.+++..++.|--++...+ ++
T Consensus 16 ~~~pls~~Q~~~~~~~~~~~~~y~~~~~~~l~g----~----------ld~~~L~~Al~~lv~rh~~LRt~f~~~~~~~~ 81 (466)
T 2xhg_A 16 GNVPLTPIQKWFFGKNFTNTGHWNQSSVLYRPE----G----------FDPKVIQSVMDKIIEHHDALRMVYQHENGNVV 81 (466)
T ss_dssp EECCCCHHHHHHHHTTCTTTTCBEEEEEEEETT----C----------CCHHHHHHHHHHHHHHSGGGGEEEECGGGCCE
T ss_pred CCCCCCHHHHHHHhCCCCCcCcceeEEEEEcCC----C----------CCHHHHHHHHHHHHHhChHhheEEecCCCcee
Confidence 568999876531 2 11223444555444 2 2379999999999999999977652222 21
Q ss_pred eEeeC--CCCeeEEEEEeCcchhcccCCCChh-hhc---ccCCCCCCCCCCCCCCceEEEEEEEEccCcEEEEeeeeeec
Q 039563 96 VIDCD--DSGVPVVETLVGSNMFDVLNFPEMD-TLE---QLLPFNPNKKHLSTHDVTVAVQINYFHCGGVAVGFNFRHIV 169 (472)
Q Consensus 96 ~i~~~--~~gv~f~~a~~~~~~~dl~~~p~~~-~l~---~l~P~~~~~~~~~~~~Pll~vQvt~~~cGGlilg~~~~H~v 169 (472)
..... ...+.+.+. |+....+.+ .+. ...- .+ .+....|++++.+-... ++-.|-+.+||.+
T Consensus 82 q~v~~~~~~~~~~~~~-------d~~~~~~~~~~~~~~~~~~~-~~---fdl~~~pl~r~~l~~~~-~~~~l~l~~HH~i 149 (466)
T 2xhg_A 82 QHNRGLGGQLYDFFSY-------NLTAQPDVQQAIEAETQRLH-SS---MNLQEGPLVKVALFQTL-HGDHLFLAIHHLV 149 (466)
T ss_dssp EEECCSSSCCCEEEEE-------ECTTCSCHHHHHHHHHHHHH-TT---CCTTTCCCEEEEEEEET-TEEEEEEEEEGGG
T ss_pred eeccccccccceeEEE-------ecCCcccHHHHHHHHHHHHH-hc---cCCCCCCeEEEEEEEcC-CCCEEEEEeeeee
Confidence 11111 112222211 221111110 111 0000 01 12335688988887777 4545779999999
Q ss_pred cchhhHHHHHHHHHHHhcCCCCCCCcCCccccCC---cc-c-----CCccCC-----------------CCCCCCCCCCC
Q 039563 170 ADGAAAIGFIKNWAKLNYSNDDHDINIDVSTKYA---VV-D-----CTNIFP-----------------PNKEISGYSRS 223 (472)
Q Consensus 170 ~Dg~g~~~fl~~wa~~~rg~~~~~~~~~~~~~~P---~~-d-----r~~l~~-----------------~~~~~p~~~~~ 223 (472)
+||.|+..|++.+.+.+++..... ++ ..+| .+ | +..+.. +...+|.-.
T Consensus 150 ~Dg~S~~~l~~el~~~Y~~~~~g~---~~-~l~~~~~~y~~~~~~~~~~~~~~~~~~~~~~W~~~l~~~~~~~lp~~~-- 223 (466)
T 2xhg_A 150 VDGISWRILFEDLATGYAQALAGQ---AI-SLPEKTDSFQSWSQWLQEYANEADLLSEIPYWESLESQAKNVSLPKDY-- 223 (466)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHTTC---CC-CCCCCCSCHHHHHHHHHHHTTSHHHHTTHHHHHHHHHHCCCCCCCCSS--
T ss_pred echhhHHHHHHHHHHHHHHHHcCC---CC-CCCCCCCCHHHHHHHHHHHhcCccchhhhHHHHHhhccCCcccCCccc--
Confidence 999999999999999886410000 11 1111 01 0 000000 000111100
Q ss_pred ccccccCCceEEEEEEEcHHHHHHHHHHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeEEEEEecCCC
Q 039563 224 INEWQRSTECVTKRFRFNGSKIAALRREMIMEKASLNLQYRPSRFEAVCGLIWGALLAMDREKHIDSTSTIATIPVNLRN 303 (472)
Q Consensus 224 ~~~~~~~~~~~~~~f~fs~~~l~~Lk~~a~~~~~~~~~~~~~St~dal~AllW~~~~~Ar~~~~~~~~~~~l~~~vd~R~ 303 (472)
+.............+.++.+..++|++.+.+ ...+|.++++.|.+-..+.+-.. .....+.+++++|.
T Consensus 224 ~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~-------~~~~t~~~~llaa~~~~l~~~~~-----~~dv~ig~~~~gR~ 291 (466)
T 2xhg_A 224 EVTDCKQKSVRNMRIRLHPEETEQLLKHANQ-------AYQTEINDLLLAALGLAFAEWSK-----LAQIVIHLEGHGRE 291 (466)
T ss_dssp CCSSCBGGGEEEEEEECCHHHHHHHHHTGGG-------TTTCCHHHHHHHHHHHHHHHHHC-----CSEEEEEEEECCCC
T ss_pred cccccccccceEEEEEcCHHHHHHHHHHhHH-------hhCCCHHHHHHHHHHHHHHHHhC-----CCceEEEecCCCCC
Confidence 0011122345678889999999999887642 23578899988876555554432 24678899999997
Q ss_pred CCCC-CCCCCcccccccee-eecccccccCCCCCHHHHHHHHHHHHHhh
Q 039563 304 RMNP-PLPEGCIGNLFHAV-TCTENNEAGDGHYNKSTLARNVREFTKMV 350 (472)
Q Consensus 304 rl~p-plp~~Y~GN~~~~~-~~~~~~~l~~~~~~l~~vA~~IR~ai~~~ 350 (472)
...+ +--.+-+|+++... .++.++. ..++.+++..|++.+.++
T Consensus 292 ~~~~~~~~~~~vG~f~n~lplr~~~~~----~~~~~~~l~~v~~~~~~~ 336 (466)
T 2xhg_A 292 DIIEQANVARTVGWFTSQYPVLLDLKQ----TAPLSDYIKLTKENMRKI 336 (466)
T ss_dssp SCSTTCCCTTCCSCCCEEEEEEEECSC----CCSHHHHHHHHHHHHHHS
T ss_pred ccccCCCccccccceeeeccEEEecCC----CCCHHHHHHHHHHHHHhC
Confidence 6421 12345677777666 6665543 568999999999988776
No 12
>3fot_A 15-O-acetyltransferase; fusarium head blight, trichothecene mycotoxin, deoxynivaleno toxin, fusarium graminearum, coenzyme A; 1.75A {Fusarium sporotrichioides} PDB: 3fp0_A*
Probab=97.47 E-value=0.0029 Score=65.71 Aligned_cols=158 Identities=13% Similarity=0.042 Sum_probs=95.4
Q ss_pred cEEEEeeeeeeccchhhHHHHHHHHHHHhcCCCCCCCcCCccccCCccc----CCccCCCCC---CCCCC--CC------
Q 039563 158 GVAVGFNFRHIVADGAAAIGFIKNWAKLNYSNDDHDINIDVSTKYAVVD----CTNIFPPNK---EISGY--SR------ 222 (472)
Q Consensus 158 Glilg~~~~H~v~Dg~g~~~fl~~wa~~~rg~~~~~~~~~~~~~~P~~d----r~~l~~~~~---~~p~~--~~------ 222 (472)
-.-|.+.+||.++||.|...|++.+=+......+.. .. ...|.++ ...|.||-. .+|.- .+
T Consensus 177 ~~~lv~~~~H~~~DG~g~~~f~~~ll~~L~~~~~~~---~~-~~~~~~~~g~E~~~L~P~~e~~~~~p~~~~~~e~~~~~ 252 (519)
T 3fot_A 177 TVEILFHSNHLFWDGIGCRKFVGDLFRLVGSYIGRS---DS-REMKKIQWGQEIKNLSPPVVDSLKLDINTLGSEFDDKC 252 (519)
T ss_dssp EEEEEEEECGGGCCHHHHHHHHHHHHHHHTTSTTC----CG-GGSCCCCTTTTGGGSCCCTGGGBSSCGGGCCHHHHHHH
T ss_pred eEEEEEEeCceeEchHhHHHHHHHHHHHHHhhhccC---Cc-cCCCcCCCCcccccCCcCHHHHhCCCCCCCCHHHHHHH
Confidence 466778899999999999999999887765421000 11 1222222 112222211 11110 00
Q ss_pred -------------Cc-cccccCCceEEEEEEEcHHHHHHHHHHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHhhhcc-cC
Q 039563 223 -------------SI-NEWQRSTECVTKRFRFNGSKIAALRREMIMEKASLNLQYRPSRFEAVCGLIWGALLAMDRE-KH 287 (472)
Q Consensus 223 -------------~~-~~~~~~~~~~~~~f~fs~~~l~~Lk~~a~~~~~~~~~~~~~St~dal~AllW~~~~~Ar~~-~~ 287 (472)
+. +.......-....+.|+.++.++|++.|.+. . ++.+|-+.+|.|.+-.++.+.... ..
T Consensus 253 ~~~~~~~~~~~~~~~~P~~~~~~~~~~~~~~ls~~~t~~L~~~ck~~----~-~~g~Tvt~~l~Aa~~~al~~~~~~~~~ 327 (519)
T 3fot_A 253 TEYTSALVANYKSRGMKFQPGLALPRCVIHKLSADESIDIVKAVKTR----L-GPGFTISHLTQAAIVLALLDHLKPNDL 327 (519)
T ss_dssp HHHHHHHHHHHHSCCSBCCCCCCCEEEEEEECCHHHHHHHHHHHHHH----T-CTTCCHHHHHHHHHHHHHHHHC----C
T ss_pred HHHHHHhhcCCCcccCCCCCCCCCcceEEEEcCHHHHHHHHHHHHhc----C-CCCeeHHHHHHHHHHHHHHhhcCCccc
Confidence 00 0001112334578899999999999999843 1 457899999988776666653221 01
Q ss_pred CCCCeeEEEEEecCCCCCCCCCCCCcccccccee-eec
Q 039563 288 IDSTSTIATIPVNLRNRMNPPLPEGCIGNLFHAV-TCT 324 (472)
Q Consensus 288 ~~~~~~~l~~~vd~R~rl~pplp~~Y~GN~~~~~-~~~ 324 (472)
.......+.++||+|+++.++.-.+|||.+.... ..+
T Consensus 328 ~~~~~~~~~~pvnlR~~l~~~~~~n~~~~~~~~~~~~v 365 (519)
T 3fot_A 328 SDDEVFISPTSVDGRRWLREDIASNFYAMCQTAAVVRI 365 (519)
T ss_dssp CTTCCEEEEEEEECGGGBCHHHHTSCCSCCEEEEEEEE
T ss_pred CCCccEEEEeeeeccccCCCcccccccceeeeeeeeEe
Confidence 1123578999999999998665567888887765 544
No 13
>3cla_A Type III chloramphenicol acetyltransferase; transferase (acyltransferase); HET: CLM; 1.75A {Escherichia coli} SCOP: c.43.1.1 PDB: 1cla_A* 2cla_A 4cla_A* 1cia_A 1qca_A*
Probab=65.91 E-value=4.3 Score=36.43 Aligned_cols=45 Identities=16% Similarity=0.199 Sum_probs=32.8
Q ss_pred CCceEEEEEEEEccCc--EEEEeeeeeeccchhhHHHHHHHHHHHhc
Q 039563 143 HDVTVAVQINYFHCGG--VAVGFNFRHIVADGAAAIGFIKNWAKLNY 187 (472)
Q Consensus 143 ~~Pll~vQvt~~~cGG--lilg~~~~H~v~Dg~g~~~fl~~wa~~~r 187 (472)
..|++.+=-..-+.|. +-|++++||.++||.-..+|++.+.+...
T Consensus 163 ~~PIi~~G~~~~~~~~~~m~lsls~DHRvvDG~~aa~Fl~~lk~~le 209 (213)
T 3cla_A 163 FAPIITMAKYQQEGDRLLLPLSVQVHHAVCDGFHVARFINRLQELCN 209 (213)
T ss_dssp CSCEEEEECCEEETTEEEEEEEEEEETTTCCHHHHHHHHHHHHHHHT
T ss_pred cccEEEeeEEEEECCeEEEEEEEEEcccccChHHHHHHHHHHHHHHH
Confidence 3588754322222233 67888999999999999999999988753
No 14
>2i9d_A Chloramphenicol acetyltransferase; structural genomics, PSI- protein structure initiative, midwest center for structural genomics; 2.30A {Bacteroides thetaiotaomicron}
Probab=64.34 E-value=4.8 Score=36.24 Aligned_cols=44 Identities=14% Similarity=0.127 Sum_probs=31.2
Q ss_pred CCceEEEEEEEEccCc--EEEEeeeeeeccchhhHHHHHHHHHHHh
Q 039563 143 HDVTVAVQINYFHCGG--VAVGFNFRHIVADGAAAIGFIKNWAKLN 186 (472)
Q Consensus 143 ~~Pll~vQvt~~~cGG--lilg~~~~H~v~Dg~g~~~fl~~wa~~~ 186 (472)
..|++.+=-..-+.|. +-|++++||.++||.-..+|++.+.+..
T Consensus 171 ~~PIi~~Gk~~~~~~r~~m~lsls~DHRvvDG~~aa~Fl~~lk~~l 216 (217)
T 2i9d_A 171 NYPLLNAGKAIIREGRLVMPIAMTIHHGFIDGHHLSLFYKKVEDFL 216 (217)
T ss_dssp SSCEEEECCCEEETTEEEEEEEEEEETTTCCHHHHHHHHHHHHHHH
T ss_pred eEEEEecceEEEECCcEEEEEEEEecchhhChHHHHHHHHHHHHHh
Confidence 3687753211112233 5788899999999999999999998754
No 15
>1q23_A Chloramphenicol acetyltransferase; CAT I, trimer, fusidic acid; HET: FUA; 2.18A {Escherichia coli} SCOP: c.43.1.1 PDB: 1noc_B 1pd5_A* 3u9b_A 3u9f_A*
Probab=63.84 E-value=5 Score=36.20 Aligned_cols=44 Identities=11% Similarity=0.154 Sum_probs=32.6
Q ss_pred CceEEEEEEEEccCc--EEEEeeeeeeccchhhHHHHHHHHHHHhc
Q 039563 144 DVTVAVQINYFHCGG--VAVGFNFRHIVADGAAAIGFIKNWAKLNY 187 (472)
Q Consensus 144 ~Pll~vQvt~~~cGG--lilg~~~~H~v~Dg~g~~~fl~~wa~~~r 187 (472)
.|++.+--..-+.|. +-|++++||.++||.-..+|++.+.+...
T Consensus 168 ~pIi~~G~~~~~~~r~~m~lsls~DHRvvDG~~aa~Fl~~lk~~le 213 (219)
T 1q23_A 168 APVFTMGKYYTQGDKVLMPLAIQVHHAVCDGFHVGRMLNELQQYCD 213 (219)
T ss_dssp SCEEEECCCEEETTEEEEEEEEEEETTTCCHHHHHHHHHHHHHHHH
T ss_pred eEEEecccEEEECCcEEEEEEEEEEchhhChHHHHHHHHHHHHHHh
Confidence 577754322223233 67889999999999999999999988764
No 16
>3rqc_A Probable lipoamide acyltransferase; alpha beta fold; 4.01A {Thermoplasma acidophilum dsm 1728}
Probab=59.57 E-value=5.6 Score=36.00 Aligned_cols=30 Identities=27% Similarity=0.368 Sum_probs=27.1
Q ss_pred EEEEeeeeeeccchhhHHHHHHHHHHHhcC
Q 039563 159 VAVGFNFRHIVADGAAAIGFIKNWAKLNYS 188 (472)
Q Consensus 159 lilg~~~~H~v~Dg~g~~~fl~~wa~~~rg 188 (472)
+-|+++++|.++||.-..+|++.+.+....
T Consensus 187 m~lsls~DHRviDGa~aa~Fl~~l~~~le~ 216 (224)
T 3rqc_A 187 MYLSLSCDHRLIDGAVATRFIVDLKKVIED 216 (224)
T ss_dssp CCEEEEEETTTSCHHHHHHHHHHHHHHHTC
T ss_pred EEEEEEeccceecHHHHHHHHHHHHHHHhC
Confidence 458899999999999999999999998764
No 17
>3b8k_A PDCE2;, dihydrolipoyllysine-residue acetyltransferase; central beta-sheet surrounded by five alpha-helices; 8.80A {Homo sapiens}
Probab=59.36 E-value=6.4 Score=35.99 Aligned_cols=29 Identities=24% Similarity=0.390 Sum_probs=26.8
Q ss_pred EEEEeeeeeeccchhhHHHHHHHHHHHhc
Q 039563 159 VAVGFNFRHIVADGAAAIGFIKNWAKLNY 187 (472)
Q Consensus 159 lilg~~~~H~v~Dg~g~~~fl~~wa~~~r 187 (472)
+-|+++++|.++||.-..+|++.+.+...
T Consensus 204 m~lsls~DHRviDGa~aa~Fl~~lk~~le 232 (239)
T 3b8k_A 204 MSVTLSCDHRVVDGAVGAQWLAEFRKYLE 232 (239)
T ss_dssp EEEEECCCCCSSCHHHHHHHHHHHHHHHH
T ss_pred EEEEEEEcceeechHHHHHHHHHHHHHHh
Confidence 78999999999999999999999998764
No 18
>1scz_A E2, dihydrolipoamide succinyltransferase; COA-dependent acyltransferase, CAT-like, alpha and beta (2 L mixed beta-sheeet of 6 strands; 2.20A {Escherichia coli} SCOP: c.43.1.1 PDB: 1e2o_A 1c4t_A
Probab=58.62 E-value=6.9 Score=35.61 Aligned_cols=30 Identities=20% Similarity=0.466 Sum_probs=27.0
Q ss_pred EEEEeeeeeeccchhhHHHHHHHHHHHhcC
Q 039563 159 VAVGFNFRHIVADGAAAIGFIKNWAKLNYS 188 (472)
Q Consensus 159 lilg~~~~H~v~Dg~g~~~fl~~wa~~~rg 188 (472)
+-|+++++|.++||.-..+|++.+.+....
T Consensus 196 m~lsls~DHRviDGa~aa~Fl~~lk~~le~ 225 (233)
T 1scz_A 196 MYLALSYDHRLIDGRESVGFLVTIKELLED 225 (233)
T ss_dssp EEEEEEEETTTCCHHHHHHHHHHHHHHHHC
T ss_pred EEEEEEEcceeechHHHHHHHHHHHHHHhC
Confidence 569999999999999999999999987754
No 19
>1dpb_A Dihydrolipoyl-transacetylase; dihydrolipoamide acetyltransferase; 2.50A {Azotobacter vinelandii} SCOP: c.43.1.1 PDB: 1dpd_A 1eaa_A 1eab_A* 1eac_A* 1ead_A* 1eae_A* 1eaf_A 1dpc_A
Probab=58.23 E-value=7 Score=35.81 Aligned_cols=30 Identities=27% Similarity=0.386 Sum_probs=27.0
Q ss_pred EEEEeeeeeeccchhhHHHHHHHHHHHhcC
Q 039563 159 VAVGFNFRHIVADGAAAIGFIKNWAKLNYS 188 (472)
Q Consensus 159 lilg~~~~H~v~Dg~g~~~fl~~wa~~~rg 188 (472)
+-|+++++|.++||.-..+|++.+.+....
T Consensus 208 m~lsls~DHRviDGa~aa~Fl~~lk~~le~ 237 (243)
T 1dpb_A 208 LPLSLSYDCRVINGAAAARFTKRLGDLLAD 237 (243)
T ss_dssp EEEEEEEETTTSCHHHHHHHHHHHHHHHHC
T ss_pred EEEEEEECcccccHHHHHHHHHHHHHHHhC
Confidence 579999999999999999999999987643
No 20
>2ii3_A Lipoamide acyltransferase component of branched-C alpha-keto acid dehydrogenase complex...; cubic core, HOMO trimer, oxidized COA-bound form; HET: CAO; 2.17A {Bos taurus} PDB: 2ihw_A* 2ii4_A* 2ii5_A*
Probab=56.71 E-value=7.7 Score=36.01 Aligned_cols=30 Identities=23% Similarity=0.408 Sum_probs=26.8
Q ss_pred EEEEeeeeeeccchhhHHHHHHHHHHHhcC
Q 039563 159 VAVGFNFRHIVADGAAAIGFIKNWAKLNYS 188 (472)
Q Consensus 159 lilg~~~~H~v~Dg~g~~~fl~~wa~~~rg 188 (472)
+-|+++++|.++||.-..+|++.+.+....
T Consensus 224 m~lsls~DHRviDGa~aa~Fl~~lk~~Le~ 253 (262)
T 2ii3_A 224 MNVSWSADHRIIDGATVSRFSNLWKSYLEN 253 (262)
T ss_dssp EEEEEEEETTTCCHHHHHHHHHHHHHHHHS
T ss_pred eEEEEEECcceecHHHHHHHHHHHHHHHhC
Confidence 568999999999999999999999987643
No 21
>3mae_A 2-oxoisovalerate dehydrogenase E2 component, dihydrolipamide acetyltransferase; 2-oxoacid dehydrogenases acyltransferase; 2.50A {Listeria monocytogenes}
Probab=50.10 E-value=11 Score=34.69 Aligned_cols=30 Identities=20% Similarity=0.205 Sum_probs=27.3
Q ss_pred EEEEeeeeeeccchhhHHHHHHHHHHHhcC
Q 039563 159 VAVGFNFRHIVADGAAAIGFIKNWAKLNYS 188 (472)
Q Consensus 159 lilg~~~~H~v~Dg~g~~~fl~~wa~~~rg 188 (472)
+-|+++++|-+.||.-..+|++.+.+....
T Consensus 210 m~lsLs~DHRviDGa~aa~Fl~~lk~~Le~ 239 (256)
T 3mae_A 210 VNLCLSIDHRILDGLLAGKFLQAIKANVEK 239 (256)
T ss_dssp EEEEEEEETTTCCHHHHHHHHHHHHHHHHT
T ss_pred EEEEEEEccccccHHHHHHHHHHHHHHHhC
Confidence 458999999999999999999999998765
No 22
>3l60_A Branched-chain alpha-keto acid dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.00A {Mycobacterium tuberculosis} SCOP: c.43.1.0
Probab=48.40 E-value=13 Score=34.25 Aligned_cols=30 Identities=30% Similarity=0.368 Sum_probs=27.1
Q ss_pred EEEEeeeeeeccchhhHHHHHHHHHHHhcC
Q 039563 159 VAVGFNFRHIVADGAAAIGFIKNWAKLNYS 188 (472)
Q Consensus 159 lilg~~~~H~v~Dg~g~~~fl~~wa~~~rg 188 (472)
+-|+++++|-+.||.-..+|++.+.+....
T Consensus 205 m~lsLs~DHRviDGa~aa~Fl~~lk~~Le~ 234 (250)
T 3l60_A 205 MTLTCVFDHRVVDGAQVAQFMCELRDLIES 234 (250)
T ss_dssp EEEEEEEETTTCCHHHHHHHHHHHHHHHHS
T ss_pred eEEEEEecccccCHHHHHHHHHHHHHHHhC
Confidence 458999999999999999999999988754
No 23
>2xl1_A Arginine attenuator peptide; translation, antibiotic, ribosome, cytomegalovirus; NMR {Neurospora crassa}
Probab=42.60 E-value=15 Score=20.05 Aligned_cols=19 Identities=21% Similarity=0.237 Sum_probs=15.8
Q ss_pred CCCCHHHHHHHHHHHHHHh
Q 039563 263 YRPSRFEAVCGLIWGALLA 281 (472)
Q Consensus 263 ~~~St~dal~AllW~~~~~ 281 (472)
+-+++.|-|+-++|+++..
T Consensus 6 svftsqdylsdhlwralna 24 (26)
T 2xl1_A 6 SVFTSQDYLSDHLWRALNA 24 (26)
T ss_pred ceeecHHHHHHHHHHHHhc
Confidence 3468899999999998863
No 24
>3dva_I Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase...; oxidoreductase, multienzyme complex; HET: TPW; 2.35A {Bacillus stearothermophilus} PDB: 3dv0_I* 3duf_I* 1b5s_A 1lab_A 1lac_A 1w3d_A
Probab=30.57 E-value=11 Score=37.78 Aligned_cols=30 Identities=27% Similarity=0.409 Sum_probs=0.0
Q ss_pred EEEEeeeeeeccchhhHHHHHHHHHHHhcC
Q 039563 159 VAVGFNFRHIVADGAAAIGFIKNWAKLNYS 188 (472)
Q Consensus 159 lilg~~~~H~v~Dg~g~~~fl~~wa~~~rg 188 (472)
+-|+++++|.++||.-..+|++.+.+....
T Consensus 391 m~lsls~DHRviDG~~aa~Fl~~lk~~Le~ 420 (428)
T 3dva_I 391 LALSLSFDHRMIDGATAQKALNHIKRLLSD 420 (428)
T ss_dssp ------------------------------
T ss_pred EEEEEEecccccchHHHHHHHHHHHHHHhC
Confidence 358999999999999999999999887643
No 25
>2k1o_A Putative; repressor, transcriptional regulator, D binding, ribbon-helix-helix, HP0564, JHP0511, unknown funct regulation; NMR {Helicobacter pylori}
Probab=27.07 E-value=93 Score=21.21 Aligned_cols=44 Identities=20% Similarity=0.131 Sum_probs=31.8
Q ss_pred CceEEEEEEEcHHHHHHHHHHHHHhhhcCCCCCCCCHHHHHHHHHHHHHHhhhccc
Q 039563 231 TECVTKRFRFNGSKIAALRREMIMEKASLNLQYRPSRFEAVCGLIWGALLAMDREK 286 (472)
Q Consensus 231 ~~~~~~~f~fs~~~l~~Lk~~a~~~~~~~~~~~~~St~dal~AllW~~~~~Ar~~~ 286 (472)
.+.-...|+||.++-+.|.+.|.++. |.+..+|=|.+.++...+
T Consensus 13 k~~~~Vs~Y~SkEey~~L~klA~eE~------------eSV~sfIKR~IlK~l~yk 56 (66)
T 2k1o_A 13 KRNFSVTFYLSKEEHDVLRRLADEEV------------ESVNSFVKRHILKTIIYK 56 (66)
T ss_dssp CCCEEEEEEEEHHHHHHHHHHHHTTC------------SCHHHHHHHHHHHHHCSS
T ss_pred ccceEEEEEecHHHHHHHHHHHHHHH------------HHHHHHHHHHHHHHHHHh
Confidence 34557789999999999999998542 234556777777776544
No 26
>1x93_A Hypothetical protein HP0222; JHP0208, transcription, regula METJ, MNT, PArg, COPG, REPA; NMR {Helicobacter pylori} SCOP: a.43.1.3
Probab=20.63 E-value=1.4e+02 Score=19.65 Aligned_cols=22 Identities=14% Similarity=0.131 Sum_probs=19.2
Q ss_pred EEEEEEEcHHHHHHHHHHHHHh
Q 039563 234 VTKRFRFNGSKIAALRREMIME 255 (472)
Q Consensus 234 ~~~~f~fs~~~l~~Lk~~a~~~ 255 (472)
....|+||.++-+.|++.|.++
T Consensus 2 ~~Vs~Y~SkEey~~L~klA~eE 23 (55)
T 1x93_A 2 RAVSLYFSDEQYQKLEKMANEE 23 (55)
T ss_dssp EEEEEEECHHHHHHHHHHHHHT
T ss_pred ceEEEEecHHHHHHHHHHHHHH
Confidence 3567999999999999999865
Done!